Citrus Sinensis ID: 024338

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------27
Protein Sequence
MVHAGIRAQVATIEQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHcHHHHccccccEEEEEccccHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHHHHcccEEEEEEcccccHHHHHHHHHHHHHHcccccEEEcccccccHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEccccccccccccccHHHHHHHHHcccccccccHHHHHHHHHHHccccccccccccEEEEcccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHcHHHHHHHcccEEEEcccccHHHHHHHHHHHHcccEEEEEEcccHHHHHHHHHHHHHHccEEEEEEcccccHHHHHHHHHHHHHHcccccEEEEcccccccccHHHccHHHHHHHHHHHcHHHHHHHHHHHHHHHHHccEEEEEEcccHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEEccEccHHHHcccHHHHHHHHccccccccEcHHHHHHHHHHHHHccHHHHccccEEEEcccccc
Coil and Loop (DISEMBL)
MVHAGIRAQVATIEQATNEAaqnveapvAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASggqaltfggdvskeaDVESMIKTAVDAWGTVDIlinnagitRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASrninvnaiapgfiasDMTAKLGEDLEKKIlekiplgrygqpeEVAGLVEFLalnpaagyitgqvltidggmvm
Flexible Loop (DISEMBL)
MVHAGIRAQVATIEQAtneaaqnveapvAVVTGASRGIGRAVatslgkagCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVdawgtvdiLINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM
Low Complexity Region (SEG)
MVHAGIRAQVATIEQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQaaakimmkkkkGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM
Disordered region (IsUnstruct)
***********************VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYA**********************************SMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDG****
Disordered Region (DISOPRED)
***************************VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM
Disordered Region (DISEMBL)
MVHAGIRAQVATIEQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM
Disordered Region (DISPRO)
********QVA*****T*EAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMV*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVHAGIRAQVATIEQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	269	2.2.26 [Sep-21-2011]
P28643	320	3-oxoacyl-[acyl-carrier-p	N/A	no	0.988	0.831	0.857	1e-125
Q949M3	315	3-oxoacyl-[acyl-carrier-p	N/A	no	0.981	0.838	0.795	1e-123
Q93X62	320	3-oxoacyl-[acyl-carrier-p	N/A	no	0.981	0.825	0.795	1e-123
Q93X67	328	3-oxoacyl-[acyl-carrier-p	N/A	no	0.951	0.780	0.802	1e-119
Q93X68	317	3-oxoacyl-[acyl-carrier-p	N/A	no	0.914	0.776	0.800	1e-115
P33207	319	3-oxoacyl-[acyl-carrier-p	yes	no	0.981	0.827	0.738	1e-114
Q949M2	254	3-oxoacyl-[acyl-carrier-p	N/A	no	0.921	0.976	0.788	1e-114
P73574	247	3-oxoacyl-[acyl-carrier-p	N/A	no	0.903	0.983	0.626	7e-83
P51831	246	3-oxoacyl-[acyl-carrier-p	yes	no	0.892	0.975	0.580	7e-79
P27582	201	3-oxoacyl-[acyl-carrier-p	N/A	no	0.635	0.850	0.704	2e-70

>sp|P28643|FABG_CUPLA 3-oxoacyl-[acyl-carrier-protein] reductase, chloroplastic OS=Cuphea lanceolata GN=CLKR27 PE=2 SV=1

 Score =  446 bits (1148), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 228/266 (85%), Positives = 248/266 (93%)

Query: 4   AGIRAQVATIEQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKE 63
           +GIRAQVAT E+ +  A Q+VE+PV +VTGASRGIG+A+A SLGKAGCKVLVNYARSSKE
Sbjct: 55  SGIRAQVATAEKVSAGAGQSVESPVVIVTGASRGIGKAIALSLGKAGCKVLVNYARSSKE 114

Query: 64  AEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRM 123
           AEEV KEIEA GGQALTFGGDVSKE DVE+MIKTAVDAWGTVDIL+NNAGITRD LLMRM
Sbjct: 115 AEEVSKEIEAFGGQALTFGGDVSKEEDVEAMIKTAVDAWGTVDILVNNAGITRDGLLMRM 174

Query: 124 KKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGV 183
           KKSQWQ+VIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGN GQANYSAAKAGV
Sbjct: 175 KKSQWQEVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNAGQANYSAAKAGV 234

Query: 184 IGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGL 243
           IG TKTVA+EYASRNINVNA+APGFI+SDMT+KLG+D+ KKILE IPLGRYGQPEEVAGL
Sbjct: 235 IGFTKTVAREYASRNINVNAVAPGFISSDMTSKLGDDINKKILETIPLGRYGQPEEVAGL 294

Query: 244 VEFLALNPAAGYITGQVLTIDGGMVM 269
           VEFLA+NPA+ Y+TGQV TIDGGM M
Sbjct: 295 VEFLAINPASSYVTGQVFTIDGGMTM 320

Cuphea lanceolata (taxid: 3930)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 1EC: 0EC: 0

>sp|Q949M3|FABG3_BRANA 3-oxoacyl-[acyl-carrier-protein] reductase 3, chloroplastic OS=Brassica napus GN=bkr3 PE=2 SV=1

 Score =  442 bits (1137), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 210/264 (79%), Positives = 240/264 (90%)

Query: 6   IRAQVATIEQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAE 65
           ++AQ   +EQ+T EA   VE+PV VVTGASRGIG+A+A SLGKAGCKVLVNYARS+KEAE
Sbjct: 52  VKAQATAVEQSTGEAVPKVESPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKEAE 111

Query: 66  EVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKK 125
           EV K+IEA GGQA+TFGGDVSKEADVE+M+KTA+DAWGT+D+++NNAGITRDTLL+RMKK
Sbjct: 112 EVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKK 171

Query: 126 SQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIG 185
           SQW +VIDLNLTGVFLCTQAA KIMMKK+KGRIINIASVVGL+GNIGQANY+AAKAGVIG
Sbjct: 172 SQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIG 231

Query: 186 LTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVE 245
            +KT A+E ASRNINVN + PGFIASDMTAKLGED+EKKIL  IPLGRYGQPE+VAGLVE
Sbjct: 232 FSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRYGQPEDVAGLVE 291

Query: 246 FLALNPAAGYITGQVLTIDGGMVM 269
           FLAL+PAA YITGQ  TIDGG+ +
Sbjct: 292 FLALSPAASYITGQAFTIDGGIAI 315

Brassica napus (taxid: 3708)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 0

EC: 0

>sp|Q93X62|FABG1_BRANA 3-oxoacyl-[acyl-carrier-protein] reductase 1, chloroplastic OS=Brassica napus GN=gbkr1 PE=1 SV=1

 Score =  442 bits (1136), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 210/264 (79%), Positives = 240/264 (90%)

Query: 6   IRAQVATIEQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAE 65
           ++AQ   +EQ+T EA   VE+PV VVTGASRGIG+A+A SLGKAGCKVLVNYARS+KEAE
Sbjct: 57  VKAQATAVEQSTGEAVPKVESPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKEAE 116

Query: 66  EVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKK 125
           EV K+IEA GGQA+TFGGDVSKEADVE+M+KTA+DAWGT+D+++NNAGITRDTLL+RMKK
Sbjct: 117 EVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKK 176

Query: 126 SQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIG 185
           SQW +VIDLNLTGVFLCTQAA KIMMKK+KGRIINIASVVGL+GNIGQANY+AAKAGVIG
Sbjct: 177 SQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIG 236

Query: 186 LTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVE 245
            +KT A+E ASRNINVN + PGFIASDMTAKLGED+EKKIL  IPLGRYGQPE+VAGLVE
Sbjct: 237 FSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRYGQPEDVAGLVE 296

Query: 246 FLALNPAAGYITGQVLTIDGGMVM 269
           FLAL+PAA YITGQ  TIDGG+ +
Sbjct: 297 FLALSPAASYITGQAFTIDGGIAI 320

Brassica napus (taxid: 3708)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 0

EC: 0

>sp|Q93X67|FABG2_BRANA 3-oxoacyl-[acyl-carrier-protein] reductase 2, chloroplastic OS=Brassica napus GN=bkr2 PE=2 SV=1

 Score =  427 bits (1099), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 207/258 (80%), Positives = 235/258 (91%), Gaps = 2/258 (0%)

Query: 14  EQAT--NEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEI 71
           EQ+T   EA   VE+PV VVTGASRGIG+A+A SLGKAGCKVLVNYARS+KEAE+V K+I
Sbjct: 71  EQSTGEEEAVPKVESPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKEAEQVSKQI 130

Query: 72  EASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDV 131
           EA GGQA+TFGGDVSKEADV++M+KTAVDAWGT+D+++NNAGITRDTLL+RMKKSQW +V
Sbjct: 131 EAYGGQAITFGGDVSKEADVDAMMKTAVDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEV 190

Query: 132 IDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVA 191
           IDLNLTGVFLCTQAA KIMMKK+KGRIINIASVVGL+GNIGQANY+AAKAGVIG +KT A
Sbjct: 191 IDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAA 250

Query: 192 KEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNP 251
           +E ASRNINVN + PGFIASDMTAKLGED+EKKIL  IPLGRYGQPE+VAGLVEFLAL+P
Sbjct: 251 REGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRYGQPEDVAGLVEFLALSP 310

Query: 252 AAGYITGQVLTIDGGMVM 269
           AA YITGQ  TIDGG+ +
Sbjct: 311 AASYITGQAFTIDGGIAI 328

Brassica napus (taxid: 3708)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 0

EC: 0

>sp|Q93X68|FABG5_BRANA 3-oxoacyl-[acyl-carrier-protein] reductase 5, chloroplastic (Fragment) OS=Brassica napus GN=bkr1 PE=2 SV=1

 Score =  413 bits (1061), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 197/246 (80%), Positives = 223/246 (90%)

Query: 24  VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGG 83
           VE+PV VVTGASRGIG+A+A SLGKAGCKVLVNYARS+KEAEEV K+IE  GG+A+TFGG
Sbjct: 72  VESPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKEAEEVSKQIEEYGGEAITFGG 131

Query: 84  DVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCT 143
           DVSKEADV+SM+KTAVD WGT+D+++NNAGITRDTLL+RMKKSQW +VIDLNLTGVFLCT
Sbjct: 132 DVSKEADVDSMMKTAVDKWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCT 191

Query: 144 QAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNA 203
           QAA KIMMKK+KGRIINIASVVGL+GNIGQANY+AAKAGVIG +KT A+E ASRNINVN 
Sbjct: 192 QAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNV 251

Query: 204 IAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTI 263
           + PGFIASDMTAKLGED+EKKIL  IPLGRYGQPE VAGLVEFLAL+PA+ YITG   +I
Sbjct: 252 VCPGFIASDMTAKLGEDMEKKILGTIPLGRYGQPEYVAGLVEFLALSPASSYITGHTFSI 311

Query: 264 DGGMVM 269
            GG  +
Sbjct: 312 HGGFAI 317

Brassica napus (taxid: 3708)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 0

EC: 0

>sp|P33207|FABG_ARATH 3-oxoacyl-[acyl-carrier-protein] reductase, chloroplastic OS=Arabidopsis thaliana GN=At1g24360 PE=2 SV=2

 Score =  412 bits (1058), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 195/264 (73%), Positives = 230/264 (87%)

Query: 6   IRAQVATIEQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAE 65
           ++AQ    EQ+  E  Q VE+PV V+TGASRGIG+A+A +LGKAGCKVLVNYARS+KEAE
Sbjct: 56  VKAQATATEQSPGEVVQKVESPVVVITGASRGIGKAIALALGKAGCKVLVNYARSAKEAE 115

Query: 66  EVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKK 125
           EV K+IE  GGQA+TFGGDVSK  DV++M+KTA+D WGT+D+++NNAGITRDTLL+RMK+
Sbjct: 116 EVAKQIEEYGGQAITFGGDVSKATDVDAMMKTALDKWGTIDVVVNNAGITRDTLLIRMKQ 175

Query: 126 SQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIG 185
           SQW +VI LNLTGVFLCTQAA KIMMKKK+GRIINI+SVVGL+GNIGQANY+AAK GVI 
Sbjct: 176 SQWDEVIALNLTGVFLCTQAAVKIMMKKKRGRIINISSVVGLIGNIGQANYAAAKGGVIS 235

Query: 186 LTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVE 245
            +KT A+E ASRNINVN + PGFIASDMTA+LGED+EKKIL  IPLGRYG+ EEVAGLVE
Sbjct: 236 FSKTAAREGASRNINVNVVCPGFIASDMTAELGEDMEKKILGTIPLGRYGKAEEVAGLVE 295

Query: 246 FLALNPAAGYITGQVLTIDGGMVM 269
           FLAL+PAA YITGQ  TIDGG+ +
Sbjct: 296 FLALSPAASYITGQAFTIDGGIAI 319

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 0

EC: 0

>sp|Q949M2|FABG4_BRANA 3-oxoacyl-[acyl-carrier-protein] reductase 4 (Fragment) OS=Brassica napus GN=bkr4 PE=2 SV=1

 Score =  410 bits (1053), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 198/251 (78%), Positives = 226/251 (90%), Gaps = 3/251 (1%)

Query: 19  EAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQA 78
           EA   VE+PV VVTGASRGIG+A+A SLGKAGCKVLVNYARS+KEAEEV K+IE  GGQA
Sbjct: 7   EAVPKVESPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKEAEEVSKQIEEYGGQA 66

Query: 79  LTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTG 138
           +TFGGDVSKEADV++M+KTAVD WGT+D+++NNAG   DTLL+RMKKSQW +V+DLNLTG
Sbjct: 67  ITFGGDVSKEADVDAMMKTAVDKWGTIDVVVNNAG---DTLLIRMKKSQWDEVMDLNLTG 123

Query: 139 VFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRN 198
           VFLC+QAA KIMMKK+KGRIINIASVVGL+GNIGQANY+AAKAGVIG +KT A+E ASRN
Sbjct: 124 VFLCSQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRN 183

Query: 199 INVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITG 258
           INVN + PGFIASDMTAKLGED+EKKIL  IPLGRYGQPE+VAGLVEFLAL+PAA YITG
Sbjct: 184 INVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRYGQPEDVAGLVEFLALSPAASYITG 243

Query: 259 QVLTIDGGMVM 269
           Q  TIDGG+ +
Sbjct: 244 QTFTIDGGIAI 254

Brassica napus (taxid: 3708)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 0

EC: 0

>sp|P73574|FABG1_SYNY3 3-oxoacyl-[acyl-carrier-protein] reductase 1 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=fabG1 PE=3 SV=1

 Score =  306 bits (785), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 154/246 (62%), Positives = 190/246 (77%), Gaps = 3/246 (1%)

Query: 24  VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGG 83
           + A VA+VTGASRGIG+A A +L   G KV+VNYA+SS  A+ V  EI A+GG+A+    
Sbjct: 4   LTAQVALVTGASRGIGKATALALAATGMKVVVNYAQSSTAADAVVAEIIANGGEAIAVQA 63

Query: 84  DVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCT 143
           +V+   +V+ +IKT +D +  +D+L+NNAGITRDTLL+RMK   WQ VIDLNLTGVFLCT
Sbjct: 64  NVANADEVDQLIKTTLDKFSRIDVLVNNAGITRDTLLLRMKLEDWQAVIDLNLTGVFLCT 123

Query: 144 QAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNA 203
           +A +K+M+K+K GRIINI SV G++GN GQANYSAAKAGVIG TKTVAKE ASR + VNA
Sbjct: 124 KAVSKLMLKQKSGRIINITSVAGMMGNPGQANYSAAKAGVIGFTKTVAKELASRGVTVNA 183

Query: 204 IAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTI 263
           +APGFIA+DMT  L  +    IL+ IPL RYGQPEEVAG + FLA +PAA YITGQ   +
Sbjct: 184 VAPGFIATDMTENLNAE---PILQFIPLARYGQPEEVAGTIRFLATDPAAAYITGQTFNV 240

Query: 264 DGGMVM 269
           DGGMVM
Sbjct: 241 DGGMVM 246

Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 0

EC: 0

>sp|P51831|FABG_BACSU 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Bacillus subtilis (strain 168) GN=fabG PE=3 SV=3

 Score =  293 bits (751), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 140/241 (58%), Positives = 188/241 (78%), Gaps = 1/241 (0%)

Query: 29  AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKE 88
           A+VTGASRGIGR++A  L K+G  V+VNY+ +  +A EV  EI++ G +A+    DVS  
Sbjct: 7   AIVTGASRGIGRSIALDLAKSGANVVVNYSGNEAKANEVVDEIKSMGRKAIAVKADVSNP 66

Query: 89  ADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAK 148
            DV++MIK  +  + T+DIL+NNAGITRD L+MRMK+ +W DVI++NL GVF CT+A  +
Sbjct: 67  EDVQNMIKETLSVFSTIDILVNNAGITRDNLIMRMKEDEWDDVININLKGVFNCTKAVTR 126

Query: 149 IMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGF 208
            MMK++ GRIIN++S+VG+ GN GQANY AAKAGVIGLTK+ AKE ASRNI VNAIAPGF
Sbjct: 127 QMMKQRSGRIINVSSIVGVSGNPGQANYVAAKAGVIGLTKSSAKELASRNITVNAIAPGF 186

Query: 209 IASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMV 268
           I++DMT KL +D++ ++L++IPL R+G+P +V+ +V FLA +  A Y+TGQ L IDGGMV
Sbjct: 187 ISTDMTDKLAKDVQDEMLKQIPLARFGEPSDVSSVVTFLA-SEGARYMTGQTLHIDGGMV 245

Query: 269 M 269
           M
Sbjct: 246 M 246

Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis.

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 0

EC: 0

>sp|P27582|FABG6_BRANA 3-oxoacyl-[acyl-carrier-protein] reductase (Fragments) OS=Brassica napus PE=1 SV=3

 Score =  265 bits (678), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 131/186 (70%), Positives = 153/186 (82%), Gaps = 15/186 (8%)

Query: 84  DVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCT 143
           + ++EADV++M+K AVD WG +D++ NNAGIT               VI LNLTGVFLC+
Sbjct: 31  NYAREADVDAMMKDAVDYWGQIDVIANNAGIT---------------VIALNLTGVFLCS 75

Query: 144 QAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNA 203
           QAA KIMMKK+KGRIINIASVVGL+GNIGQANY+AAKAGVIG +KT A+E ASRNINVN 
Sbjct: 76  QAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNV 135

Query: 204 IAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTI 263
           + PGFIAS+MTAKLGED+EKKIL  IPLGRYGQPE+VAGLVEFLAL+PAA YITGQ  TI
Sbjct: 136 VCPGFIASEMTAKLGEDMEKKILGTIPLGRYGQPEDVAGLVEFLALSPAASYITGQTFTI 195

Query: 264 DGGMVM 269
           DGG+ +
Sbjct: 196 DGGIAI 201

Brassica napus (taxid: 3708)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 0

EC: 0

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	269
TAIR|locus:2024021	319	AT1G24360 [Arabidopsis thalian	0.981	0.827	0.704	7.4e-98
TIGR_CMR|BA_3989	246	BA_3989 "3-oxoacyl-(acyl-carri	0.910	0.995	0.556	6.5e-67
UNIPROTKB|Q5HPW0	244	fabG "3-oxoacyl-[acyl-carrier-	0.892	0.983	0.543	3.3e-63
UNIPROTKB|Q8CPI3	244	fabG "3-oxoacyl-[acyl-carrier-	0.892	0.983	0.543	3.3e-63
UNIPROTKB|P0A0I0	246	fabG "3-oxoacyl-[acyl-carrier-	0.892	0.975	0.539	1.1e-62
UNIPROTKB|P99093	246	fabG "3-oxoacyl-[acyl-carrier-	0.892	0.975	0.539	1.1e-62
UNIPROTKB|Q5HGK2	246	fabG "3-oxoacyl-[acyl-carrier-	0.892	0.975	0.539	1.1e-62
UNIPROTKB|Q6G9Y2	246	fabG "3-oxoacyl-[acyl-carrier-	0.892	0.975	0.539	1.1e-62
UNIPROTKB|Q6GHK4	246	fabG "3-oxoacyl-[acyl-carrier-	0.892	0.975	0.539	1.1e-62
GENEDB_PFALCIPARUM|PFI1125c	301	PFI1125c "3-oxoacyl-(acyl-carr	0.895	0.800	0.514	1.3e-59

TAIR|locus:2024021 AT1G24360 [Arabidopsis thaliana (taxid:3702)]

 Score = 972 (347.2 bits), Expect = 7.4e-98, P = 7.4e-98
 Identities = 186/264 (70%), Positives = 220/264 (83%)

Query:     6 IRAQVATIEQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAE 65
             ++AQ    EQ+  E  Q VE+PV V+TGASRGIG+A+A +LGKAGCKVLVNYARS+KEAE
Sbjct:    56 VKAQATATEQSPGEVVQKVESPVVVITGASRGIGKAIALALGKAGCKVLVNYARSAKEAE 115

Query:    66 EVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKK 125
             EV K+IE  GGQA+TFGGDVSK  DV++M+KTA+D WGT+D+++NNAGITRDTLL+RMK+
Sbjct:   116 EVAKQIEEYGGQAITFGGDVSKATDVDAMMKTALDKWGTIDVVVNNAGITRDTLLIRMKQ 175

Query:   126 SQWQDVIDLNLTGVFLCTQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIG 185
             SQW +VI LNLTGVFLCTQ           GRIINI+SVVGL+GNIGQANY+AAK GVI 
Sbjct:   176 SQWDEVIALNLTGVFLCTQAAVKIMMKKKRGRIINISSVVGLIGNIGQANYAAAKGGVIS 235

Query:   186 LTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVE 245
              +KT A+E ASRNINVN + PGFIASDMTA+LGED+EKKIL  IPLGRYG+ EEVAGLVE
Sbjct:   236 FSKTAAREGASRNINVNVVCPGFIASDMTAELGEDMEKKILGTIPLGRYGKAEEVAGLVE 295

Query:   246 FLALNPAAGYITGQVLTIDGGMVM 269
             FLAL+PAA YITGQ  TIDGG+ +
Sbjct:   296 FLALSPAASYITGQAFTIDGGIAI 319

GO:0000166 "nucleotide binding" evidence=IEA

GO:0004316 "3-oxoacyl-[acyl-carrier-protein

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0051287 "NAD binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0005507 "copper ion binding" evidence=IDA

GO:0000038 "very long-chain fatty acid metabolic process" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0042335 "cuticle development" evidence=RCA

GO:0009536 "plastid" evidence=IDA

TIGR_CMR|BA_3989 BA_3989 "3-oxoacyl-(acyl-carrier-protein) reductase" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 680 (244.4 bits), Expect = 6.5e-67, P = 6.5e-67
 Identities = 137/246 (55%), Positives = 176/246 (71%)

Query:    24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGG 83
             ++  VA+VTGASRGIGRA+A  L K G  V+VNYA + ++A EV  EI+  G  A+    
Sbjct:     2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRA 61

Query:    84 DVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCT 143
             DV+   DV +M+K  VD +G VDIL+NNAG+T+D LLMRMK+ +W  VI+ NL GVFLCT
Sbjct:    62 DVANAEDVTNMVKQTVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCT 121

Query:   144 QXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNA 203
             +           GRI+NIASVVG+ GN GQANY AAKAGVIGLTKT AKE ASRNI VNA
Sbjct:   122 KAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGVIGLTKTSAKELASRNITVNA 181

Query:   204 IAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTI 263
             IAPGFIA+DMT  L E+++ ++L+ IP  ++G+ +++A  V F A + +  YITGQ L +
Sbjct:   182 IAPGFIATDMTDVLDENIKAEMLKLIPAAQFGEAQDIANAVTFFASDQSK-YITGQTLNV 240

Query:   264 DGGMVM 269
             DGGMVM
Sbjct:   241 DGGMVM 246

GO:0004316 "3-oxoacyl-[acyl-carrier-protein

GO:0006633 "fatty acid biosynthetic process" evidence=ISS

UNIPROTKB|Q5HPW0 fabG "3-oxoacyl-[acyl-carrier-protein] reductase FabG" [Staphylococcus epidermidis RP62A (taxid:176279)]

 Score = 645 (232.1 bits), Expect = 3.3e-63, P = 3.3e-63
 Identities = 131/241 (54%), Positives = 169/241 (70%)

Query:    29 AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKE 88
             A+VTGASRGIGR++A  L + G  V VNYA S  +AE V +EI+A G ++     +V+K 
Sbjct:     5 ALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKDKAEAVVEEIKAKGVESFAIQANVAKG 64

Query:    89 ADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXXX 148
              +V+ MIK  V  +G+VD+L+NNAGIT+D LLMRMK+ +W DVID NL GVF C Q    
Sbjct:    65 DEVKEMIKEVVSQFGSVDVLVNNAGITKDNLLMRMKEQEWDDVIDTNLKGVFNCIQKVTP 124

Query:   149 XXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGF 208
                    G IIN+ S+VG +GN GQANY A KAGVIGLTKT A+E ASR I VNA+APGF
Sbjct:   125 QMLRQRSGAIINLTSIVGAMGNPGQANYVATKAGVIGLTKTAARELASRGITVNAVAPGF 184

Query:   209 IASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMV 268
             I SDMT  L +DL+ ++LE+IPL R+G+  ++A  V FLA + A  YITGQ + ++GGM 
Sbjct:   185 IVSDMTNALSDDLKDQMLEQIPLKRFGEDTDIANTVAFLASDKAK-YITGQTIHVNGGMY 243

Query:   269 M 269
             M
Sbjct:   244 M 244

GO:0004316 "3-oxoacyl-[acyl-carrier-protein

GO:0030497 "fatty acid elongation" evidence=ISS

GO:0050661 "NADP binding" evidence=ISS

UNIPROTKB|Q8CPI3 fabG "3-oxoacyl-[acyl-carrier-protein] reductase FabG" [Staphylococcus epidermidis ATCC 12228 (taxid:176280)]

 Score = 645 (232.1 bits), Expect = 3.3e-63, P = 3.3e-63
 Identities = 131/241 (54%), Positives = 169/241 (70%)

Query:    29 AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKE 88
             A+VTGASRGIGR++A  L + G  V VNYA S  +AE V +EI+A G ++     +V+K 
Sbjct:     5 ALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKDKAEAVVEEIKAKGVESFAIQANVAKG 64

Query:    89 ADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXXX 148
              +V+ MIK  V  +G+VD+L+NNAGIT+D LLMRMK+ +W DVID NL GVF C Q    
Sbjct:    65 DEVKEMIKEVVSQFGSVDVLVNNAGITKDNLLMRMKEQEWDDVIDTNLKGVFNCIQKVTP 124

Query:   149 XXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGF 208
                    G IIN+ S+VG +GN GQANY A KAGVIGLTKT A+E ASR I VNA+APGF
Sbjct:   125 QMLRQRSGAIINLTSIVGAMGNPGQANYVATKAGVIGLTKTAARELASRGITVNAVAPGF 184

Query:   209 IASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMV 268
             I SDMT  L +DL+ ++LE+IPL R+G+  ++A  V FLA + A  YITGQ + ++GGM 
Sbjct:   185 IVSDMTNALSDDLKDQMLEQIPLKRFGEDTDIANTVAFLASDKAK-YITGQTIHVNGGMY 243

Query:   269 M 269
             M
Sbjct:   244 M 244

GO:0004316 "3-oxoacyl-[acyl-carrier-protein

GO:0030497 "fatty acid elongation" evidence=ISS

GO:0050661 "NADP binding" evidence=ISS

UNIPROTKB|P0A0I0 fabG "3-oxoacyl-[acyl-carrier-protein] reductase FabG" [Staphylococcus aureus subsp. aureus MW2 (taxid:196620)]

 Score = 640 (230.4 bits), Expect = 1.1e-62, P = 1.1e-62
 Identities = 130/241 (53%), Positives = 170/241 (70%)

Query:    29 AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKE 88
             A+VTGASRGIGR++A  L + G  V VNYA S ++AE V +EI+A G  +     +V+  
Sbjct:     7 ALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADA 66

Query:    89 ADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXXX 148
              +V++MIK  V  +G++D+L+NNAGITRD LLMRMK+ +W DVID NL GVF C Q    
Sbjct:    67 DEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATP 126

Query:   149 XXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGF 208
                    G IIN++SVVG VGN GQANY A KAGVIGLTK+ A+E ASR I VNA+APGF
Sbjct:   127 QMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGF 186

Query:   209 IASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMV 268
             I SDMT  L ++L++++L +IPL R+GQ  ++A  V FLA + A  YITGQ + ++GGM 
Sbjct:   187 IVSDMTDALSDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAK-YITGQTIHVNGGMY 245

Query:   269 M 269
             M
Sbjct:   246 M 246

GO:0004316 "3-oxoacyl-[acyl-carrier-protein

GO:0030497 "fatty acid elongation" evidence=ISS

GO:0050661 "NADP binding" evidence=ISS

UNIPROTKB|P99093 fabG "3-oxoacyl-[acyl-carrier-protein] reductase FabG" [Staphylococcus aureus subsp. aureus N315 (taxid:158879)]

 Score = 640 (230.4 bits), Expect = 1.1e-62, P = 1.1e-62
 Identities = 130/241 (53%), Positives = 170/241 (70%)

Query:    29 AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKE 88
             A+VTGASRGIGR++A  L + G  V VNYA S ++AE V +EI+A G  +     +V+  
Sbjct:     7 ALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADA 66

Query:    89 ADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXXX 148
              +V++MIK  V  +G++D+L+NNAGITRD LLMRMK+ +W DVID NL GVF C Q    
Sbjct:    67 DEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATP 126

Query:   149 XXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGF 208
                    G IIN++SVVG VGN GQANY A KAGVIGLTK+ A+E ASR I VNA+APGF
Sbjct:   127 QMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGF 186

Query:   209 IASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMV 268
             I SDMT  L ++L++++L +IPL R+GQ  ++A  V FLA + A  YITGQ + ++GGM 
Sbjct:   187 IVSDMTDALSDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAK-YITGQTIHVNGGMY 245

Query:   269 M 269
             M
Sbjct:   246 M 246

GO:0004316 "3-oxoacyl-[acyl-carrier-protein

GO:0030497 "fatty acid elongation" evidence=ISS

GO:0050661 "NADP binding" evidence=ISS

UNIPROTKB|Q5HGK2 fabG "3-oxoacyl-[acyl-carrier-protein] reductase FabG" [Staphylococcus aureus subsp. aureus COL (taxid:93062)]

 Score = 640 (230.4 bits), Expect = 1.1e-62, P = 1.1e-62
 Identities = 130/241 (53%), Positives = 170/241 (70%)

Query:    29 AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKE 88
             A+VTGASRGIGR++A  L + G  V VNYA S ++AE V +EI+A G  +     +V+  
Sbjct:     7 ALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADA 66

Query:    89 ADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXXX 148
              +V++MIK  V  +G++D+L+NNAGITRD LLMRMK+ +W DVID NL GVF C Q    
Sbjct:    67 DEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATP 126

Query:   149 XXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGF 208
                    G IIN++SVVG VGN GQANY A KAGVIGLTK+ A+E ASR I VNA+APGF
Sbjct:   127 QMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGF 186

Query:   209 IASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMV 268
             I SDMT  L ++L++++L +IPL R+GQ  ++A  V FLA + A  YITGQ + ++GGM 
Sbjct:   187 IVSDMTDALSDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAK-YITGQTIHVNGGMY 245

Query:   269 M 269
             M
Sbjct:   246 M 246

GO:0004316 "3-oxoacyl-[acyl-carrier-protein

GO:0030497 "fatty acid elongation" evidence=ISS

GO:0050661 "NADP binding" evidence=ISS

UNIPROTKB|Q6G9Y2 fabG "3-oxoacyl-[acyl-carrier-protein] reductase FabG" [Staphylococcus aureus subsp. aureus MSSA476 (taxid:282459)]

 Score = 640 (230.4 bits), Expect = 1.1e-62, P = 1.1e-62
 Identities = 130/241 (53%), Positives = 170/241 (70%)

Query:    29 AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKE 88
             A+VTGASRGIGR++A  L + G  V VNYA S ++AE V +EI+A G  +     +V+  
Sbjct:     7 ALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADA 66

Query:    89 ADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXXX 148
              +V++MIK  V  +G++D+L+NNAGITRD LLMRMK+ +W DVID NL GVF C Q    
Sbjct:    67 DEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATP 126

Query:   149 XXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGF 208
                    G IIN++SVVG VGN GQANY A KAGVIGLTK+ A+E ASR I VNA+APGF
Sbjct:   127 QMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGF 186

Query:   209 IASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMV 268
             I SDMT  L ++L++++L +IPL R+GQ  ++A  V FLA + A  YITGQ + ++GGM 
Sbjct:   187 IVSDMTDALSDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAK-YITGQTIHVNGGMY 245

Query:   269 M 269
             M
Sbjct:   246 M 246

GO:0004316 "3-oxoacyl-[acyl-carrier-protein

GO:0030497 "fatty acid elongation" evidence=ISS

GO:0050661 "NADP binding" evidence=ISS

UNIPROTKB|Q6GHK4 fabG "3-oxoacyl-[acyl-carrier-protein] reductase FabG" [Staphylococcus aureus subsp. aureus MRSA252 (taxid:282458)]

 Score = 640 (230.4 bits), Expect = 1.1e-62, P = 1.1e-62
 Identities = 130/241 (53%), Positives = 170/241 (70%)

Query:    29 AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKE 88
             A+VTGASRGIGR++A  L + G  V VNYA S ++AE V +EI+A G  +     +V+  
Sbjct:     7 ALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADA 66

Query:    89 ADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXXX 148
              +V++MIK  V  +G++D+L+NNAGITRD LLMRMK+ +W DVID NL GVF C Q    
Sbjct:    67 DEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATP 126

Query:   149 XXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGF 208
                    G IIN++SVVG VGN GQANY A KAGVIGLTK+ A+E ASR I VNA+APGF
Sbjct:   127 QMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGF 186

Query:   209 IASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMV 268
             I SDMT  L ++L++++L +IPL R+GQ  ++A  V FLA + A  YITGQ + ++GGM 
Sbjct:   187 IVSDMTDALSDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAK-YITGQTIHVNGGMY 245

Query:   269 M 269
             M
Sbjct:   246 M 246

GO:0004316 "3-oxoacyl-[acyl-carrier-protein

GO:0030497 "fatty acid elongation" evidence=ISS

GO:0050661 "NADP binding" evidence=ISS

GENEDB_PFALCIPARUM|PFI1125c PFI1125c "3-oxoacyl-(acyl-carrier protein) reductase, putative" [Plasmodium falciparum (taxid:5833)]

 Score = 611 (220.1 bits), Expect = 1.3e-59, P = 1.3e-59
 Identities = 125/243 (51%), Positives = 165/243 (67%)

Query:    25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGD 84
             E  VA+VTGA RGIGR +A  L K+   V+   +R+ K  + V  EI++ G ++  + GD
Sbjct:    59 ENKVALVTGAGRGIGREIAKMLAKSVSHVIC-ISRTQKSCDSVVDEIKSFGYESSGYAGD 117

Query:    85 VSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQ 144
             VSK+ ++  +I   +     VDIL+NNAGITRD L +RMK  +W+DV+  NL  +F  TQ
Sbjct:   118 VSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQ 177

Query:   145 XXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAI 204
                        GRIINI+S+VGL GN+GQANYS++KAGVIG TK++AKE ASRNI VNAI
Sbjct:   178 PISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNITVNAI 237

Query:   205 APGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTID 264
             APGFI+SDMT K+ E ++K I+  IP GR G PEEVA L  FL+ +  +GYI G+V  ID
Sbjct:   238 APGFISSDMTDKISEQIKKNIISNIPAGRMGTPEEVANLACFLS-SDKSGYINGRVFVID 296

Query:   265 GGM 267
             GG+
Sbjct:   297 GGL 299

GO:0020011 "apicoplast" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O67610	FABG_AQUAE	1, ., 1, ., 1, ., 1, 0, 0	0.4775	0.8996	0.9758	yes	no
Q9X248	FABG_THEMA	1, ., 1, ., 1, ., 1, 0, 0	0.4634	0.9070	0.9918	yes	no
Q8N4T8	CBR4_HUMAN	1, ., 1, ., 1, ., -	0.4333	0.8550	0.9704	yes	no
Q1RKB7	FABG_RICBR	1, ., 1, ., 1, ., 1, 0, 0	0.5515	0.6096	0.6804	yes	no
P0A0H9	FABG_STAAM	1, ., 1, ., 1, ., 1, 0, 0	0.5477	0.8921	0.9756	yes	no
P66781	Y1350_MYCTU	1, ., -, ., -, ., -	0.4186	0.9033	0.9838	yes	no
P66782	Y1385_MYCBO	1, ., -, ., -, ., -	0.4186	0.9033	0.9838	yes	no
Q9Z8P2	FABG_CHLPN	1, ., 1, ., 1, ., 1, 0, 0	0.4327	0.8773	0.9516	yes	no
Q5HPW0	FABG_STAEQ	1, ., 1, ., 1, ., 1, 0, 0	0.5477	0.8921	0.9836	yes	no
Q5HGK2	FABG_STAAC	1, ., 1, ., 1, ., 1, 0, 0	0.5477	0.8921	0.9756	yes	no
Q7TS56	CBR4_RAT	1, ., 1, ., 1, ., -	0.4333	0.8513	0.9703	yes	no
P33207	FABG_ARATH	1, ., 1, ., 1, ., 1, 0, 0	0.7386	0.9814	0.8275	yes	no
O54438	FABG_PSEAE	1, ., 1, ., 1, ., 1, 0, 0	0.4655	0.9107	0.9919	yes	no
Q6P0H7	CBR4_DANRE	1, ., 1, ., 1, ., -	0.45	0.8550	0.9704	yes	no
Q89AG9	FABG_BUCBP	1, ., 1, ., 1, ., 1, 0, 0	0.3991	0.8810	0.9673	yes	no
Q4UK62	FABG_RICFE	1, ., 1, ., 1, ., 1, 0, 0	0.5636	0.6096	0.6804	yes	no
Q8CPI3	FABG_STAES	1, ., 1, ., 1, ., 1, 0, 0	0.5477	0.8921	0.9836	yes	no
Q9KQH7	FABG_VIBCH	1, ., 1, ., 1, ., 1, 0, 0	0.5040	0.8959	0.9877	yes	no
Q949M2	FABG4_BRANA	1, ., 1, ., 1, ., 1, 0, 0	0.7888	0.9219	0.9763	N/A	no
Q949M3	FABG3_BRANA	1, ., 1, ., 1, ., 1, 0, 0	0.7954	0.9814	0.8380	N/A	no
Q6GHK4	FABG_STAAR	1, ., 1, ., 1, ., 1, 0, 0	0.5477	0.8921	0.9756	yes	no
P99093	FABG_STAAN	1, ., 1, ., 1, ., 1, 0, 0	0.5477	0.8921	0.9756	yes	no
P28643	FABG_CUPLA	1, ., 1, ., 1, ., 1, 0, 0	0.8571	0.9888	0.8312	N/A	no
P0A0I0	FABG_STAAW	1, ., 1, ., 1, ., 1, 0, 0	0.5477	0.8921	0.9756	yes	no
P0A2C9	FABG_SALTY	1, ., 1, ., 1, ., 1, 0, 0	0.4979	0.8996	0.9918	yes	no
Q92GE0	FABG_RICCN	1, ., 1, ., 1, ., 1, 0, 0	0.5107	0.6840	0.7634	yes	no
P73574	FABG1_SYNY3	1, ., 1, ., 1, ., 1, 0, 0	0.6260	0.9033	0.9838	N/A	no
Q6G9Y2	FABG_STAAS	1, ., 1, ., 1, ., 1, 0, 0	0.5477	0.8921	0.9756	yes	no
P55336	FABG_VIBHA	1, ., 1, ., 1, ., 1, 0, 0	0.5	0.8959	0.9877	yes	no
Q9PKF7	FABG_CHLMU	1, ., 1, ., 1, ., 1, 0, 0	0.45	0.8810	0.9556	yes	no
P50941	FABG_RICPR	1, ., 1, ., 1, ., 1, 0, 0	0.4897	0.8550	0.9543	yes	no
P51831	FABG_BACSU	1, ., 1, ., 1, ., 1, 0, 0	0.5809	0.8921	0.9756	yes	no
P27582	FABG6_BRANA	1, ., 1, ., 1, ., 1, 0, 0	0.7043	0.6356	0.8507	N/A	no
Q8K9J5	FABG_BUCAP	1, ., 1, ., 1, ., 1, 0, 0	0.3983	0.8959	0.9877	yes	no
Q91VT4	CBR4_MOUSE	1, ., 1, ., 1, ., -	0.4375	0.8513	0.9703	yes	no
Q93X67	FABG2_BRANA	1, ., 1, ., 1, ., 1, 0, 0	0.8023	0.9516	0.7804	N/A	no
Q68VY7	FABG_RICTY	1, ., 1, ., 1, ., 1, 0, 0	0.4618	0.8327	0.9294	yes	no
Q93X62	FABG1_BRANA	1, ., 1, ., 1, ., 1, 0, 0	0.7954	0.9814	0.825	N/A	no
P43713	FABG_HAEIN	1, ., 1, ., 1, ., 1, 0, 0	0.4634	0.8959	0.9958	yes	no
P38004	FABG_CHLTR	1, ., 1, ., 1, ., 1, 0, 0	0.4416	0.8810	0.9556	yes	no
Q93X68	FABG5_BRANA	1, ., 1, ., 1, ., 1, 0, 0	0.8008	0.9144	0.7760	N/A	no
P0AEK3	FABG_SHIFL	1, ., 1, ., 1, ., 1, 0, 0	0.5060	0.8996	0.9918	yes	no
P0AEK2	FABG_ECOLI	1, ., 1, ., 1, ., 1, 0, 0	0.5060	0.8996	0.9918	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	0.983
3rd Layer	1.3.1	LOW CONFIDENCE prediction!
4th Layer	1.1.1.100	0.979
3rd Layer	1.5.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	269
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	1e-130
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	1e-126
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-125
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-110
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-97
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	8e-90
cd05233	234	cd05233, SDR_c, classical (c) SDRs	9e-84
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	4e-83
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	1e-81
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	3e-79
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	1e-76
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	1e-76
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	8e-75
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-72
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	3e-72
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	7e-69
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	2e-68
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	3e-68
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	5e-67
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	6e-67
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	1e-66
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	4e-66
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	9e-66
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	7e-65
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	8e-65
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	8e-65
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	7e-64
PRK12936	245	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote	6e-63
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	2e-62
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	2e-62
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	4e-61
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	8e-61
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	2e-60
PRK08993	253	PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog	2e-58
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	1e-57
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	4e-57
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	5e-57
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	7e-57
PRK12481	251	PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog	1e-56
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	1e-56
TIGR01831	239	TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-prote	1e-56
PRK08261	450	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-55
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	5e-55
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	6e-55
PRK07792	306	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-54
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	6e-54
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-53
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	3e-53
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	4e-53
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	4e-53
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	5e-53
cd02266	186	cd02266, SDR, Short-chain dehydrogenases/reductase	5e-53
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	1e-52
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	2e-52
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	5e-52
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	8e-52
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	1e-51
PRK09135	249	PRK09135, PRK09135, pteridine reductase; Provision	1e-51
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	3e-51
PRK07791	286	PRK07791, PRK07791, short chain dehydrogenase; Pro	7e-51
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	8e-51
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	8e-51
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	8e-51
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	1e-50
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	2e-50
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	4e-50
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	1e-49
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	2e-49
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	2e-49
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	3e-49
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	6e-49
PRK12938	246	PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro	7e-49
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	1e-48
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	2e-48
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	3e-48
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	7e-48
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	8e-48
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	1e-47
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-47
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	2e-47
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-47
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	3e-47
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	3e-47
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	8e-47
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	1e-46
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	2e-46
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	4e-46
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	5e-46
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	6e-46
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	7e-46
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	2e-45
cd05322	257	cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehy	2e-45
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	2e-45
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	2e-45
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	3e-45
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	4e-45
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	6e-45
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	1e-44
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	2e-44
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	2e-44
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	2e-44
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	4e-44
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-44
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	9e-44
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	1e-43
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	2e-43
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	6e-43
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	8e-43
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	8e-43
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	9e-43
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	2e-42
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	3e-42
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	1e-41
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	1e-41
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	4e-41
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	2e-40
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	2e-40
PRK07576	264	PRK07576, PRK07576, short chain dehydrogenase; Pro	3e-40
cd08936	256	cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re	3e-40
PRK08642	253	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-40
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	5e-39
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	7e-39
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	7e-39
PRK07069	251	PRK07069, PRK07069, short chain dehydrogenase; Val	8e-39
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	1e-38
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	3e-38
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	4e-38
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	5e-38
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	9e-38
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	3e-37
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	3e-37
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	3e-37
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	4e-37
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	4e-37
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	4e-37
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	6e-37
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	8e-37
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	2e-36
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	2e-36
PRK09134	258	PRK09134, PRK09134, short chain dehydrogenase; Pro	2e-36
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	3e-36
PRK12746	254	PRK12746, PRK12746, short chain dehydrogenase; Pro	1e-35
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	2e-35
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	2e-35
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	5e-35
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	7e-35
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	2e-34
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	3e-34
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	3e-34
PRK12747	252	PRK12747, PRK12747, short chain dehydrogenase; Pro	3e-34
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	1e-33
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	3e-33
PRK06128	300	PRK06128, PRK06128, oxidoreductase; Provisional	4e-33
cd09763	265	cd09763, DHRS1-like_SDR_c, human dehydrogenase/red	1e-32
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	3e-32
PRK12859	256	PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote	3e-32
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	6e-32
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	6e-32
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	1e-31
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	2e-31
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	3e-31
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	3e-31
PRK12748	256	PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote	3e-31
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	4e-31
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	5e-31
TIGR02685	267	TIGR02685, pter_reduc_Leis, pteridine reductase	9e-31
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	1e-30
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	2e-30
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	5e-29
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	6e-29
PRK12742	237	PRK12742, PRK12742, oxidoreductase; Provisional	6e-29
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	8e-29
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	9e-29
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	1e-28
PRK07985	294	PRK07985, PRK07985, oxidoreductase; Provisional	1e-28
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	2e-28
PRK05717	255	PRK05717, PRK05717, oxidoreductase; Validated	2e-28
PRK08339	263	PRK08339, PRK08339, short chain dehydrogenase; Pro	8e-28
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	2e-27
PRK05875	276	PRK05875, PRK05875, short chain dehydrogenase; Pro	4e-27
PRK08416	260	PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydro	2e-26
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	4e-26
cd05361	242	cd05361, haloalcohol_DH_SDR_c-like, haloalcohol de	5e-26
PRK08340	259	PRK08340, PRK08340, glucose-1-dehydrogenase; Provi	6e-26
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	3e-25
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	3e-25
PRK08278	273	PRK08278, PRK08278, short chain dehydrogenase; Pro	7e-25
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	3e-24
cd05373	238	cd05373, SDR_c10, classical (c) SDR, subgroup 10	3e-24
PRK07024	257	PRK07024, PRK07024, short chain dehydrogenase; Pro	6e-24
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	6e-24
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	8e-24
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	1e-23
TIGR03325	262	TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-	3e-23
pfam13561	239	pfam13561, adh_short_C2, Enoyl-(Acyl carrier prote	1e-22
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	1e-22
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	1e-22
PRK12744	257	PRK12744, PRK12744, short chain dehydrogenase; Pro	2e-22
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	9e-22
PRK07775	274	PRK07775, PRK07775, short chain dehydrogenase; Pro	9e-22
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	1e-21
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	1e-21
cd09762	243	cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro	4e-21
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	6e-21
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	1e-20
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	3e-20
PRK07806	248	PRK07806, PRK07806, short chain dehydrogenase; Pro	4e-20
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	6e-20
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	1e-19
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	1e-19
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	2e-19
PRK05876	275	PRK05876, PRK05876, short chain dehydrogenase; Pro	2e-18
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	3e-18
pfam08659	181	pfam08659, KR, KR domain	7e-18
PRK05693	274	PRK05693, PRK05693, short chain dehydrogenase; Pro	1e-17
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	2e-17
PRK06139	330	PRK06139, PRK06139, short chain dehydrogenase; Pro	6e-17
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	8e-17
smart00822	180	smart00822, PKS_KR, This enzymatic domain is part	3e-16
cd05328	250	cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de	7e-16
PRK06940	275	PRK06940, PRK06940, short chain dehydrogenase; Pro	2e-15
cd05372	250	cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP)	2e-15
PRK06483	236	PRK06483, PRK06483, dihydromonapterin reductase; P	3e-15
PLN02780	320	PLN02780, PLN02780, ketoreductase/ oxidoreductase	3e-15
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	5e-15
PRK05786	238	PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-14
cd09805	281	cd09805, type2_17beta_HSD-like_SDR_c, human 17beta	2e-14
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	4e-14
COG0623	259	COG0623, FabI, Enoyl-[acyl-carrier-protein]	4e-14
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	6e-14
PRK06924	251	PRK06924, PRK06924, short chain dehydrogenase; Pro	2e-13
TIGR01500	256	TIGR01500, sepiapter_red, sepiapterin reductase	6e-13
cd09806	258	cd09806, type1_17beta-HSD-like_SDR_c, human estrog	1e-12
PRK07041	230	PRK07041, PRK07041, short chain dehydrogenase; Pro	1e-12
PRK08251	248	PRK08251, PRK08251, short chain dehydrogenase; Pro	1e-12
PRK07370	258	PRK07370, PRK07370, enoyl-(acyl carrier protein) r	4e-12
cd11731	198	cd11731, Lin1944_like_SDR_c, Lin1944 and related p	7e-12
PRK06482	276	PRK06482, PRK06482, short chain dehydrogenase; Pro	9e-12
PRK08594	257	PRK08594, PRK08594, enoyl-(acyl carrier protein) r	3e-11
cd05274	375	cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatt	3e-11
cd08955	376	cd08955, KR_2_FAS_SDR_x, beta-ketoacyl reductase (	3e-11
PRK08303	305	PRK08303, PRK08303, short chain dehydrogenase; Pro	7e-11
PRK06720	169	PRK06720, PRK06720, hypothetical protein; Provisio	8e-11
PRK05993	277	PRK05993, PRK05993, short chain dehydrogenase; Pro	9e-11
cd11730	206	cd11730, Tthb094_like_SDR_c, Tthb094 and related p	1e-10
cd05334	221	cd05334, DHPR_SDR_c_like, dihydropteridine reducta	1e-10
PRK09291	257	PRK09291, PRK09291, short chain dehydrogenase; Pro	4e-10
PRK07102	243	PRK07102, PRK07102, short chain dehydrogenase; Pro	4e-09
PRK12428	241	PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydro	7e-09
PRK06196	315	PRK06196, PRK06196, oxidoreductase; Provisional	1e-08
PRK08703	239	PRK08703, PRK08703, short chain dehydrogenase; Pro	1e-08
PRK05884	223	PRK05884, PRK05884, short chain dehydrogenase; Pro	2e-08
PRK07023	243	PRK07023, PRK07023, short chain dehydrogenase; Pro	4e-08
PRK08017	256	PRK08017, PRK08017, oxidoreductase; Provisional	5e-08
cd08951	260	cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13	1e-07
cd09808	255	cd09808, DHRS-12_like_SDR_c-like, human dehydrogen	2e-07
PRK06101	240	PRK06101, PRK06101, short chain dehydrogenase; Pro	9e-07
PRK07533	258	PRK07533, PRK07533, enoyl-(acyl carrier protein) r	2e-06
cd09809	284	cd09809, human_WWOX_like_SDR_c-like, human WWOX (W	2e-06
PRK05854	313	PRK05854, PRK05854, short chain dehydrogenase; Pro	1e-05
PRK06197	306	PRK06197, PRK06197, short chain dehydrogenase; Pro	4e-05
cd05271	273	cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub	5e-05
PRK08862	227	PRK08862, PRK08862, short chain dehydrogenase; Pro	8e-05
cd08941	290	cd08941, 3KS_SDR_c, 3-keto steroid reductase, clas	2e-04
PRK06300	299	PRK06300, PRK06300, enoyl-(acyl carrier protein) r	3e-04
PRK06505	271	PRK06505, PRK06505, enoyl-(acyl carrier protein) r	0.004

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score =  368 bits (948), Expect = e-130
 Identities = 147/240 (61%), Positives = 184/240 (76%), Gaps = 1/240 (0%)

Query: 29  AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKE 88
           A+VTGASRGIGRA+A  L K G KV++ Y  S + AEEV +E++A G +AL    DVS  
Sbjct: 1   ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDR 60

Query: 89  ADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAK 148
            DV+++++   +  G +DIL+NNAGITRD LLMRMK+  W  VID NLTGVF  TQA  +
Sbjct: 61  EDVKAVVEEIEEELGPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLR 120

Query: 149 IMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGF 208
           IM+K++ GRIINI+SVVGL+GN GQANY+A+KAGVIG TK++AKE ASRNI VNA+APGF
Sbjct: 121 IMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVIGFTKSLAKELASRNITVNAVAPGF 180

Query: 209 IASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMV 268
           I +DMT KL E ++KKIL +IPLGR+G PEEVA  V FLA +  A YITGQV+ +DGGM 
Sbjct: 181 IDTDMTDKLSEKVKKKILSQIPLGRFGTPEEVANAVAFLA-SDEASYITGQVIHVDGGMY 239

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score =  358 bits (922), Expect = e-126
 Identities = 142/241 (58%), Positives = 176/241 (73%), Gaps = 2/241 (0%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA+VTGASRGIGRA+A  L   G KV V   RS + A E  +EI+A GG A     DVS 
Sbjct: 2   VALVTGASRGIGRAIALRLAAEGAKVAVTD-RSEEAAAETVEEIKALGGNAAALEADVSD 60

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
              VE++++     +G VDIL+NNAGITRD LLMRM +  W  VI++NLTGVF  TQA  
Sbjct: 61  REAVEALVEKVEAEFGPVDILVNNAGITRDNLLMRMSEEDWDAVINVNLTGVFNVTQAVI 120

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
           + M+K++ GRIINI+SVVGL+GN GQANY+A+KAGVIG TK++AKE ASR I VNA+APG
Sbjct: 121 RAMIKRRSGRIINISSVVGLIGNPGQANYAASKAGVIGFTKSLAKELASRGITVNAVAPG 180

Query: 208 FIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM 267
           FI +DMT  L E +++KIL++IPLGR G PEEVA  V FLA +  A YITGQVL ++GGM
Sbjct: 181 FIDTDMTDALPEKVKEKILKQIPLGRLGTPEEVANAVAFLASDD-ASYITGQVLHVNGGM 239

Query: 268 V 268
            
Sbjct: 240 Y 240

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  354 bits (912), Expect = e-125
 Identities = 148/242 (61%), Positives = 179/242 (73%), Gaps = 1/242 (0%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA+VTGASRGIGRA+A  L   G  V++NYA S   AE +  EI A GG+AL   GDVS 
Sbjct: 7   VALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSD 66

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
              VE  +  A   +G VDIL+NNAGITRD LLMRMK+  W  VID NLTGVF  T+A A
Sbjct: 67  AESVERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVA 126

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
           + MMK++ GRIINI+SVVGL+GN GQANY+A+KAGVIG TK++A+E ASR I VNA+APG
Sbjct: 127 RPMMKQRSGRIINISSVVGLMGNPGQANYAASKAGVIGFTKSLARELASRGITVNAVAPG 186

Query: 208 FIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM 267
           FI +DMT  L ED+++ IL +IPLGR GQPEE+A  V FLA +  A YITGQ L ++GGM
Sbjct: 187 FIETDMTDALPEDVKEAILAQIPLGRLGQPEEIASAVAFLA-SDEAAYITGQTLHVNGGM 245

Query: 268 VM 269
           VM
Sbjct: 246 VM 247

Length = 248

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  318 bits (817), Expect = e-110
 Identities = 139/242 (57%), Positives = 175/242 (72%), Gaps = 2/242 (0%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
            A+VTGASRGIGRA+A  L   G KV V Y  + + AE +  E+ A+GG+A     DVS 
Sbjct: 7   TALVTGASRGIGRAIALRLAADGAKV-VIYDSNEEAAEALAAELRAAGGEARVLVFDVSD 65

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
           EA V ++I+ AV+A+G +DIL+NNAGITRD LL RM +  W  VID+NLTG F   +AA 
Sbjct: 66  EAAVRALIEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAAL 125

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
             M+K + GRI+NI+SV G+ GN GQ NYSAAKAGVIG TK +A E ASR I VNA+APG
Sbjct: 126 PPMIKARYGRIVNISSVSGVTGNPGQTNYSAAKAGVIGFTKALALELASRGITVNAVAPG 185

Query: 208 FIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM 267
           FI +DMT  L E+++ +IL++IPLGR GQPEEVA  V FLA + AA YITGQV+ ++GGM
Sbjct: 186 FIDTDMTEGLPEEVKAEILKEIPLGRLGQPEEVANAVAFLA-SDAASYITGQVIPVNGGM 244

Query: 268 VM 269
            M
Sbjct: 245 YM 246

Length = 246

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  285 bits (732), Expect = 2e-97
 Identities = 110/242 (45%), Positives = 160/242 (66%), Gaps = 1/242 (0%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA+VTGA+RG+GRA+A  L +AG  V+V+Y    + AEE+ + +EA G +A     DV+ 
Sbjct: 8   VALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTD 67

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
           +A +E+ +  AV+ +G +DIL+NNAGI  D  L  M   +W +VID+NL+GVF   +A  
Sbjct: 68  KAALEAAVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVV 127

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
             M K++ GRI+NI+SV GL G  G++NY+AAKAG++GLTK +A+E A   I VN +APG
Sbjct: 128 PPMRKQRGGRIVNISSVAGLPGWPGRSNYAAAKAGLVGLTKALARELAEYGITVNMVAPG 187

Query: 208 FIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM 267
            I +DM     E+  +    + PLGR G PE++A  V FL  + A+ YITGQV+ + GG+
Sbjct: 188 DIDTDMKEATIEEAREAKDAETPLGRSGTPEDIARAVAFLC-SDASDYITGQVIEVTGGV 246

Query: 268 VM 269
            +
Sbjct: 247 DV 248

Length = 249

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  265 bits (681), Expect = 8e-90
 Identities = 114/240 (47%), Positives = 163/240 (67%), Gaps = 1/240 (0%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA+VTGAS GIGRA+A  L K G KV++ Y  + + A+E+ +EI+  GG A+    DVS 
Sbjct: 7   VAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSS 66

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
           E DVE++++  V+ +G +DIL+NNAGI+   L+  M   +W  VID+NLTGV L T+ A 
Sbjct: 67  EEDVENLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYAL 126

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
             M+K+K G I+NI+S+ GL+G   +  YSA+K  V   TK +AKE A   I VNA+APG
Sbjct: 127 PYMIKRKSGVIVNISSIWGLIGASCEVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPG 186

Query: 208 FIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM 267
            I ++M +   E+ ++ + E+IPLGR G+PEE+A +V FLA +  A YITGQ++T+DGG 
Sbjct: 187 AIDTEMWSSFSEEDKEGLAEEIPLGRLGKPEEIAKVVLFLA-SDDASYITGQIITVDGGW 245

Length = 247

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score =  250 bits (640), Expect = 9e-84
 Identities = 117/237 (49%), Positives = 154/237 (64%), Gaps = 4/237 (1%)

Query: 29  AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKE 88
           A+VTGAS GIGRA+A  L + G KV++        AE     IEA GG A+    DVS E
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLADRNEEALAELA--AIEALGGNAVAVQADVSDE 58

Query: 89  ADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAK 148
            DVE++++ A++ +G +DIL+NNAGI R   L  +    W  V+D+NLTGVFL T+AA  
Sbjct: 59  EDVEALVEEALEEFGRLDILVNNAGIARPGPLEELTDEDWDRVLDVNLTGVFLLTRAALP 118

Query: 149 IMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGF 208
            M K+  GRI+NI+SV GL    GQA Y+A+KA + GLT+++A E A   I VNA+APG 
Sbjct: 119 HMKKQGGGRIVNISSVAGLRPLPGQAAYAASKAALEGLTRSLALELAPYGIRVNAVAPGL 178

Query: 209 IASDMTAKLGED-LEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTID 264
           + + M AKLG +  EK++   IPLGR G PEEVA  V FLA +  A YITGQV+ +D
Sbjct: 179 VDTPMLAKLGPEEAEKELAAAIPLGRLGTPEEVAEAVVFLA-SDEASYITGQVIPVD 234

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score =  249 bits (637), Expect = 4e-83
 Identities = 107/247 (43%), Positives = 152/247 (61%), Gaps = 4/247 (1%)

Query: 25  EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGD 84
           E  VA+VTGA+RGIGRA+A  L   G +V+V       +A    + +EA+GG+A     D
Sbjct: 5   EGRVALVTGAARGIGRAIAVRLAADGAEVIV-VDICGDDAAATAELVEAAGGKARARQVD 63

Query: 85  VSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQ 144
           V   A +++ +   V+ +G +DIL+ NAGI   T    M   QW+ VID+NLTG FL TQ
Sbjct: 64  VRDRAALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQ 123

Query: 145 AAAKIMMKKKKGRIINIASVVGL-VGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNA 203
           AA   +++   GRI+  +SV G  VG  G A+Y+A+KAG++G T+ +A E A+RNI VN+
Sbjct: 124 AALPALIRAGGGRIVLTSSVAGPRVGYPGLAHYAASKAGLVGFTRALALELAARNITVNS 183

Query: 204 IAPGFIASDMTAKLGED-LEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLT 262
           + PG + + M   LG+    + I   IPLGR G+PE++A  V FLA +  A YITGQ L 
Sbjct: 184 VHPGGVDTPMAGNLGDAQWAEAIAAAIPLGRLGEPEDIAAAVLFLA-SDEARYITGQTLP 242

Query: 263 IDGGMVM 269
           +DGG  +
Sbjct: 243 VDGGATL 249

Length = 251

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score =  245 bits (627), Expect = 1e-81
 Identities = 117/243 (48%), Positives = 158/243 (65%), Gaps = 4/243 (1%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA+VTGAS GIG+A+A  L  AG  V+VNY      AEEV +EI+A GG+A+    DVSK
Sbjct: 5   VALVTGASSGIGKAIAIRLATAGANVVVNYRSKEDAAEEVVEEIKAVGGKAIAVQADVSK 64

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
           E DV ++ ++A+  +GT+DIL+NNAG+  D     M    W  VID+NLTG FLC + A 
Sbjct: 65  EEDVVALFQSAIKEFGTLDILVNNAGLQGDASSHEMTLEDWNKVIDVNLTGQFLCAREAI 124

Query: 148 KIMMK-KKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
           K   K K KG+IIN++SV   +   G  NY+A+K GV  +TKT+A+EYA + I VNAIAP
Sbjct: 125 KRFRKSKIKGKIINMSSVHEKIPWPGHVNYAASKGGVKMMTKTLAQEYAPKGIRVNAIAP 184

Query: 207 GFIASDMTAKLGEDLE--KKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTID 264
           G I + + A+  +D E    +L  IP+GR G+PEE+A    +LA +  A Y+TG  L +D
Sbjct: 185 GAINTPINAEAWDDPEQRADLLSLIPMGRIGEPEEIAAAAAWLA-SDEASYVTGTTLFVD 243

Query: 265 GGM 267
           GGM
Sbjct: 244 GGM 246

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score =  239 bits (611), Expect = 3e-79
 Identities = 109/242 (45%), Positives = 146/242 (60%), Gaps = 1/242 (0%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           +A+VTG   GIG A+   L K G +V  N   + + AE   +E  A G       GDVS 
Sbjct: 2   IALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSS 61

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
               ++ +       G +D+L+NNAGITRD    +M   QW  VID NL  VF  TQ   
Sbjct: 62  FESCKAAVAKVEAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVI 121

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
             M ++  GRIINI+SV G  G  GQ NYSAAKAG+IG TK +A+E A++ + VN I+PG
Sbjct: 122 DGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPG 181

Query: 208 FIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM 267
           +IA+DM   + ED+   I+ +IP+GR G+PEE+A  V FLA +  AGYITG  L+I+GG+
Sbjct: 182 YIATDMVMAMREDVLNSIVAQIPVGRLGRPEEIAAAVAFLA-SEEAGYITGATLSINGGL 240

Query: 268 VM 269
            M
Sbjct: 241 YM 242

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score =  232 bits (594), Expect = 1e-76
 Identities = 123/248 (49%), Positives = 159/248 (64%), Gaps = 10/248 (4%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEI--EASGGQALTFGGDV 85
           VA+VTGAS GIGRA+A +L + G +V+V   RS +EA E       EA GG+A     DV
Sbjct: 7   VALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADV 66

Query: 86  S-KEADVESMIKTAVDAWGTVDILINNAGITR-DTLLMRMKKSQWQDVIDLNLTGVFLCT 143
           S  E  VE+++  A + +G +DIL+NNAGI   D  L  + +  W  VID+NL G FL T
Sbjct: 67  SDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLT 126

Query: 144 QAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNA 203
           +AA  +M K    RI+NI+SV GL G  GQA Y+A+KA +IGLTK +A E A R I VNA
Sbjct: 127 RAALPLMKK---QRIVNISSVAGLGGPPGQAAYAASKAALIGLTKALALELAPRGIRVNA 183

Query: 204 IAPGFIASDMTAKLGEDLE---KKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQV 260
           +APG+I + MTA L        K++  +IPLGR G PEEVA  V FLA + AA YITGQ 
Sbjct: 184 VAPGYIDTPMTAALESAELEALKRLAARIPLGRLGTPEEVAAAVAFLASDEAASYITGQT 243

Query: 261 LTIDGGMV 268
           L +DGG++
Sbjct: 244 LPVDGGLL 251

Length = 251

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score =  232 bits (593), Expect = 1e-76
 Identities = 107/242 (44%), Positives = 161/242 (66%), Gaps = 4/242 (1%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA+VTGASRGIG  +A+ L +AG  +++N +R+ ++AEE  + IE  G +A  F  DVS 
Sbjct: 7   VALVTGASRGIGFGIASGLAEAGANIVIN-SRNEEKAEEAQQLIEKEGVEATAFTCDVSD 65

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
           E  +++ ++   + +G +DIL+NNAGI R        +++W+DVID+NL GVF  +QA A
Sbjct: 66  EEAIKAAVEAIEEDFGKIDILVNNAGIIRRHPAEEFPEAEWRDVIDVNLNGVFFVSQAVA 125

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
           + M+K+  G+IINI S++  +G      Y+A+K GV GLTK +A E+A   I VNAIAPG
Sbjct: 126 RHMIKQGHGKIINICSLLSELGGPPVPAYAASKGGVAGLTKALATEWARHGIQVNAIAPG 185

Query: 208 FIASDMTAKLGEDLE--KKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDG 265
           + A++MT  +  D E    IL++IP GR+GQPE++ G   FLA + A+ Y+ GQ++ +DG
Sbjct: 186 YFATEMTEAVVADPEFNDDILKRIPAGRWGQPEDLVGAAVFLA-SDASDYVNGQIIFVDG 244

Query: 266 GM 267
           G 
Sbjct: 245 GW 246

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score =  228 bits (583), Expect = 8e-75
 Identities = 103/245 (42%), Positives = 146/245 (59%), Gaps = 7/245 (2%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
            A+VTG SRG+G  +A +LG+AG +V+++ AR ++E EE    +EA G  AL    DV+ 
Sbjct: 14  TALVTGGSRGLGLQIAEALGEAGARVVLS-ARKAEELEEAAAHLEALGIDALWIAADVAD 72

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
           EAD+E + +  ++ +G VDIL+NNAG T            W  V++LN+ G+FL +QA A
Sbjct: 73  EADIERLAEETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVA 132

Query: 148 KIMMKK-KKGRIINIASVVGLVGN----IGQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
           K  M     GRIIN+ASV GL GN    +    Y+ +K  VI  T+ +A E+    I VN
Sbjct: 133 KRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAYNTSKGAVINFTRALAAEWGPHGIRVN 192

Query: 203 AIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLT 262
           AIAPGF  + MT    E L + +L   PLGR G  E++ G    LA + A+ +ITGQ+L 
Sbjct: 193 AIAPGFFPTKMTRGTLERLGEDLLAHTPLGRLGDDEDLKGAALLLA-SDASKHITGQILA 251

Query: 263 IDGGM 267
           +DGG+
Sbjct: 252 VDGGV 256

Length = 259

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  222 bits (569), Expect = 1e-72
 Identities = 109/253 (43%), Positives = 158/253 (62%), Gaps = 17/253 (6%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKV-LVNYARSSKEAEEVCKEIEASGGQALTFGGDVS 86
           V V+TG ++G+GRA+A  L + G K+ L++   + ++ EE   E  A G +   +  +V+
Sbjct: 7   VIVITGGAQGLGRAMAEYLAQKGAKLALID--LNQEKLEEAVAECGALGTEVRGYAANVT 64

Query: 87  KEADVESMIKTAVDAWGTVDILINNAGITRDTLLM---------RMKKSQWQDVIDLNLT 137
            E DVE+      + +G ++ LINNAGI RD LL+         +M   Q+Q VID+NLT
Sbjct: 65  DEEDVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLT 124

Query: 138 GVFLCTQAAAKIMMK-KKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYAS 196
           GVFLC + AA  M++   KG IINI+S +   GN+GQ NYSA+KAGV  +T T AKE A 
Sbjct: 125 GVFLCGREAAAKMIESGSKGVIINISS-IARAGNMGQTNYSASKAGVAAMTVTWAKELAR 183

Query: 197 RNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYI 256
             I V AIAPG I ++MTA +  +  +++ + IP+GR G+PEE+A  V F+  N    Y+
Sbjct: 184 YGIRVAAIAPGVIETEMTAAMKPEALERLEKMIPVGRLGEPEEIAHTVRFIIEN---DYV 240

Query: 257 TGQVLTIDGGMVM 269
           TG+VL IDGG+ +
Sbjct: 241 TGRVLEIDGGLRL 253

Length = 253

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score =  221 bits (564), Expect = 3e-72
 Identities = 107/242 (44%), Positives = 149/242 (61%), Gaps = 1/242 (0%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           +A+VTGA RGIG A+A  L   G +V+  Y   +  A++  +E   +  Q      DV+ 
Sbjct: 4   IALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTD 63

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
             +    +    +  G VDIL+NNAGITRD++  RM   +W DVI+ NL  VF  TQ   
Sbjct: 64  TEECAEALAEIEEEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLF 123

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
             M ++  GRIINI+SV GL G  GQ NYSAAKAG+IG TK +A E A   I VN IAPG
Sbjct: 124 AAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGMIGFTKALASEGARYGITVNCIAPG 183

Query: 208 FIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM 267
           +IA+ M  ++G ++ + I+ +IP+ R G PEE+A  V FL  + AAG+ITG+ ++I+GG+
Sbjct: 184 YIATPMVEQMGPEVLQSIVNQIPMKRLGTPEEIAAAVAFLV-SEAAGFITGETISINGGL 242

Query: 268 VM 269
            M
Sbjct: 243 YM 244

Length = 245

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  212 bits (543), Expect = 7e-69
 Identities = 98/245 (40%), Positives = 140/245 (57%), Gaps = 8/245 (3%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA+VTGAS GIG  +A      G +V+V   R+ + AE V  EI A GG+A+    DVS 
Sbjct: 7   VAIVTGASSGIGEGIARRFAAEGARVVVT-DRNEEAAERVAAEILA-GGRAIAVAADVSD 64

Query: 88  EADVESMIKTAVDAWGTVDILINNAGIT-RDTLLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
           EADVE+ +  A++ +G+VDIL+NNAG T R+  L+ + ++++  +  +N+   +L TQAA
Sbjct: 65  EADVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAA 124

Query: 147 AKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
              M  +  G I+N+AS  GL    G   Y+A+K  VI LTK +A E     I VNA+AP
Sbjct: 125 VPAMRGEGGGAIVNVASTAGLRPRPGLGWYNASKGAVITLTKALAAELGPDKIRVNAVAP 184

Query: 207 GFIASDMTAKL----GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLT 262
             + + +          +   K L  IPLGR G PE++A    FLA +  A +ITG  L 
Sbjct: 185 VVVETGLLEAFMGEPTPENRAKFLATIPLGRLGTPEDIANAALFLA-SDEASWITGVTLV 243

Query: 263 IDGGM 267
           +DGG 
Sbjct: 244 VDGGR 248

Length = 251

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score =  211 bits (539), Expect = 2e-68
 Identities = 109/242 (45%), Positives = 161/242 (66%), Gaps = 2/242 (0%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA+VTG ++GIG+A+  +L + G KV++NY  S + AE +  E+   G        DVSK
Sbjct: 8   VAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSK 67

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
             D   +++ AV+ +G VDIL+NNAGITRD    ++ +  W+ VID+NL+ VF  T A  
Sbjct: 68  VEDANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVL 127

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
             + + ++GRII+I+S++G  G  GQ NYSAAKAG++G TK++A E A  N+ VNAI PG
Sbjct: 128 PYITEAEEGRIISISSIIGQAGGFGQTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPG 187

Query: 208 FIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM 267
           FI ++M A++ E++ +KI+ KIP  R+GQ +E+A  V +L  + A  YITGQ L I+GG+
Sbjct: 188 FIDTEMVAEVPEEVRQKIVAKIPKKRFGQADEIAKGVVYLCRDGA--YITGQQLNINGGL 245

Query: 268 VM 269
            M
Sbjct: 246 YM 247

Length = 247

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score =  211 bits (540), Expect = 3e-68
 Identities = 99/254 (38%), Positives = 145/254 (57%), Gaps = 14/254 (5%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA+VTGA+ GIG  +A +L K G KV++    + + A    + ++ +GG+A+    DV+ 
Sbjct: 6   VALVTGAASGIGLEIALALAKEGAKVVIA-DLNDEAAAAAAEALQKAGGKAIGVAMDVTD 64

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
           E  + + I  AV+ +G VDIL+NNAGI     +      +W+ +I + L G FL T+AA 
Sbjct: 65  EEAINAGIDYAVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAAL 124

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
            IM  +  GRIIN+ASV GLVG+ G+A Y +AK G+IGLTK VA E A+  + VNAI PG
Sbjct: 125 PIMKAQGGGRIINMASVHGLVGSAGKAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPG 184

Query: 208 FIAS--------DMTAKLGEDLEKK----ILEKIPLGRYGQPEEVAGLVEFLALNPAAGY 255
           ++ +        D+  + G   E+     +L  +P  R+   EE+A    FLA   A G 
Sbjct: 185 YVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEEIADYALFLASFAAKG- 243

Query: 256 ITGQVLTIDGGMVM 269
           +TGQ   +DGG   
Sbjct: 244 VTGQAWVVDGGWTA 257

Length = 258

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score =  208 bits (531), Expect = 5e-67
 Identities = 96/248 (38%), Positives = 142/248 (57%), Gaps = 3/248 (1%)

Query: 23  NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFG 82
           N+    A+VTGA+RG+G A A +L +AG  V  N    + EA E+   +EA+GG+A    
Sbjct: 4   NLAGKRALVTGAARGLGAAFAEALAEAGATVAFN-DGLAAEARELAAALEAAGGRAHAIA 62

Query: 83  GDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLC 142
            D++  A V+     A  A G +D L+NNAGIT       +    W  V+++N+ G FL 
Sbjct: 63  ADLADPASVQRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLM 122

Query: 143 TQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
            +AA   +    +GRI+N+AS   L G      Y A+K  VIG+T+++A+E   R I VN
Sbjct: 123 LRAALPHLRDSGRGRIVNLASDTALWGAPKLGAYVASKGAVIGMTRSLARELGGRGITVN 182

Query: 203 AIAPGFIASDMTAKL-GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL 261
           AIAPG  A++ TA +  ++     L+   L R   P++VAG V FL L+ AA ++TGQ+L
Sbjct: 183 AIAPGLTATEATAYVPADERHAYYLKGRALERLQVPDDVAGAVLFL-LSDAARFVTGQLL 241

Query: 262 TIDGGMVM 269
            ++GG VM
Sbjct: 242 PVNGGFVM 249

Length = 250

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score =  208 bits (531), Expect = 6e-67
 Identities = 102/249 (40%), Positives = 154/249 (61%), Gaps = 4/249 (1%)

Query: 22  QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTF 81
            ++E  V V+TG S G+GRA+A   GK   KV++NY    +EA +V +EI+ +GG+A+  
Sbjct: 3   SDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAV 62

Query: 82  GGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFL 141
            GDV+ E+DV ++I+TAV  +GT+D++INNAGI        M    W  VI+ NLTG FL
Sbjct: 63  KGDVTVESDVVNLIQTAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFL 122

Query: 142 CTQAAAKIMMKK-KKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNIN 200
            ++ A K  ++   KG IIN++SV   +      +Y+A+K GV  +T+T+A EYA + I 
Sbjct: 123 GSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYAASKGGVKLMTETLAMEYAPKGIR 182

Query: 201 VNAIAPGFIASDMTAKLGEDLEKK--ILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITG 258
           VN I PG I + + A+   D +++  +   IP+G  G+PEE+A +  +LA +  A Y+TG
Sbjct: 183 VNNIGPGAINTPINAEKFADPKQRADVESMIPMGYIGKPEEIAAVAAWLA-SSEASYVTG 241

Query: 259 QVLTIDGGM 267
             L  DGGM
Sbjct: 242 ITLFADGGM 250

Length = 261

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score =  207 bits (528), Expect = 1e-66
 Identities = 100/242 (41%), Positives = 141/242 (58%), Gaps = 4/242 (1%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA+VTGASRGIGRA+A  L + G  V+VNYA S   AEEV  EIEA+GG+A+    DVS 
Sbjct: 5   VALVTGASRGIGRAIAKRLARDGASVVVNYASSKAAAEEVVAEIEAAGGKAIAVQADVSD 64

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
            + V  +   A  A+G VDIL+NNAG+     +    + ++  +  +N  G F   Q AA
Sbjct: 65  PSQVARLFDAAEKAFGGVDILVNNAGVMLKKPIAETSEEEFDRMFTVNTKGAFFVLQEAA 124

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
           K +  +  GRIINI+S +          Y+ +KA V   T+ +AKE   R I VNA+APG
Sbjct: 125 KRL--RDGGRIINISSSLTAAYTPNYGAYAGSKAAVEAFTRVLAKELGGRGITVNAVAPG 182

Query: 208 FIASDMTAKLG-EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGG 266
            + +DM      E+  +   +  PLGR G+PE++A +V FLA +P   ++ GQV+  +GG
Sbjct: 183 PVDTDMFYAGKTEEAVEGYAKMSPLGRLGEPEDIAPVVAFLA-SPDGRWVNGQVIRANGG 241

Query: 267 MV 268
            V
Sbjct: 242 YV 243

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score =  205 bits (525), Expect = 4e-66
 Identities = 89/252 (35%), Positives = 138/252 (54%), Gaps = 13/252 (5%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA+VT AS GIG A+A +L + G +V +  AR+ +  E    E+ A G   L    D++ 
Sbjct: 3   VALVTAASSGIGLAIARALAREGARVAIC-ARNRENLERAASELRAGGAGVLAVVADLTD 61

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
             D++ +++ A DA+G VDIL+NNAG         +    W +  DL L  V    +A  
Sbjct: 62  PEDIDRLVEKAGDAFGRVDILVNNAGGPPPGPFAELTDEDWLEAFDLKLLSVIRIVRAVL 121

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
             M ++  GRI+NI+S+            + A+AG+IGL KT+++E A   + VN++ PG
Sbjct: 122 PGMKERGWGRIVNISSLTVKEPEPNLVLSNVARAGLIGLVKTLSRELAPDGVTVNSVLPG 181

Query: 208 FIASDMTAKLGEDLEKK-----------ILEKIPLGRYGQPEEVAGLVEFLALNPAAGYI 256
           +I ++   +L E   +K           +  +IPLGR G+PEE+A L+ FLA +  A YI
Sbjct: 182 YIDTERVRRLLEARAEKEGISVEEAEKEVASQIPLGRVGKPEELAALIAFLA-SEKASYI 240

Query: 257 TGQVLTIDGGMV 268
           TGQ + +DGG+ 
Sbjct: 241 TGQAILVDGGLT 252

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score =  204 bits (522), Expect = 9e-66
 Identities = 104/247 (42%), Positives = 159/247 (64%), Gaps = 7/247 (2%)

Query: 23  NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFG 82
           ++E  VA+VTGA+ G+G+ +A  L +AG  + V   RS  E  E  +++EA G + L+  
Sbjct: 2   SLEGKVALVTGANTGLGQGIAVGLAEAGADI-VGAGRS--EPSETQQQVEALGRRFLSLT 58

Query: 83  GDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLC 142
            D+S    +++++ +AV+ +G +DIL+NNAGI R        +  W DV+++NL  VF  
Sbjct: 59  ADLSDIEAIKALVDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFL 118

Query: 143 TQAAAKIMMKK-KKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINV 201
           TQAAAK  +K+ + G+IINIAS++   G I   +Y+A+K  V GLTK +A E+A++ INV
Sbjct: 119 TQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASKHAVAGLTKLLANEWAAKGINV 178

Query: 202 NAIAPGFIASDMTAKL--GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQ 259
           NAIAPG++A++ T  L   ED    ILE+IP GR+G P+++ G   FLA + A+ Y+ G 
Sbjct: 179 NAIAPGYMATNNTQALRADEDRNAAILERIPAGRWGTPDDIGGPAVFLA-SSASDYVNGY 237

Query: 260 VLTIDGG 266
            L +DGG
Sbjct: 238 TLAVDGG 244

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score =  203 bits (517), Expect = 7e-65
 Identities = 96/246 (39%), Positives = 149/246 (60%), Gaps = 5/246 (2%)

Query: 23  NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFG 82
           +++  VA+VTG + G+G+  A +L KAG  +++    +    +E  + IE  G +     
Sbjct: 12  SLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGT--NWDETRRLIEKEGRKVTFVQ 69

Query: 83  GDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLC 142
            D++K    E ++K A++ +G +DIL+NNAG  R   L+  K   W  V+D+NL  V+  
Sbjct: 70  VDLTKPESAEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHL 129

Query: 143 TQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
           +QA AK+M K+  G+IINIAS++   G      Y+A+K GV GLTK  A E A+ NI VN
Sbjct: 130 SQAVAKVMAKQGSGKIINIASMLSFQGGKFVPAYTASKHGVAGLTKAFANELAAYNIQVN 189

Query: 203 AIAPGFIASDMTAKLGEDLE--KKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQV 260
           AIAPG+I +  TA +  D     +IL++IP GR+G+P+++ G   FLA + A+ Y+ G +
Sbjct: 190 AIAPGYIKTANTAPIRADKNRNDEILKRIPAGRWGEPDDLMGAAVFLA-SRASDYVNGHI 248

Query: 261 LTIDGG 266
           L +DGG
Sbjct: 249 LAVDGG 254

Length = 258

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score =  202 bits (515), Expect = 8e-65
 Identities = 92/240 (38%), Positives = 130/240 (54%), Gaps = 3/240 (1%)

Query: 29  AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKE 88
           A+VTG SRGIG+A+A  L + G  V++NY +S   A EV  EIE  GG+A+    DVS+ 
Sbjct: 1   ALVTGGSRGIGKAIALRLAERGADVVINYRKSKDAAAEVAAEIEELGGKAVVVRADVSQP 60

Query: 89  ADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAK 148
            DVE M     + +G +D+L++NA       L  +  + W   ++ NL  +  C Q AAK
Sbjct: 61  QDVEEMFAAVKERFGRLDVLVSNAAAGAFRPLSELTPAHWDAKMNTNLKALVHCAQQAAK 120

Query: 149 IMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGF 208
           +M ++  GRI+ I+S+  +           AKA +  L + +A E   R I VNA++PG 
Sbjct: 121 LMRERGGGRIVAISSLGSIRALPNYLAVGTAKAALEALVRYLAVELGPRGIRVNAVSPGV 180

Query: 209 IASDMTAKL--GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGG 266
           I +D  A     EDL +      P GR G P++VA  V FL    AA  ITGQ L +DGG
Sbjct: 181 IDTDALAHFPNREDLLEAAAANTPAGRVGTPQDVADAVGFLCS-DAARMITGQTLVVDGG 239

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score =  202 bits (516), Expect = 8e-65
 Identities = 101/254 (39%), Positives = 150/254 (59%), Gaps = 13/254 (5%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA++TGA++GIGRA+A  L   G  +++      + A+   +EI  +G  A+  G DV+ 
Sbjct: 4   VAIITGAAQGIGRAIAERLAADGFNIVLADLNLEEAAKSTIQEISEAGYNAVAVGADVTD 63

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
           + DVE++I  AV+ +G+ D+++NNAGI   T L+ + +   + V  +N+ GV    QAAA
Sbjct: 64  KDDVEALIDQAVEKFGSFDVMVNNAGIAPITPLLTITEEDLKKVYAVNVFGVLFGIQAAA 123

Query: 148 KIMMKKK-KGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
           +   K    G+IIN +S+ G+ G      YSA+K  V GLT+T A+E A + I VNA AP
Sbjct: 124 RQFKKLGHGGKIINASSIAGVQGFPNLGAYSASKFAVRGLTQTAAQELAPKGITVNAYAP 183

Query: 207 GFIASDM----TAKLGEDLEKKILE-------KIPLGRYGQPEEVAGLVEFLALNPAAGY 255
           G + ++M      ++GE   K   E        IPLGR  +PE+VAGLV FLA +  + Y
Sbjct: 184 GIVKTEMWDYIDEEVGEIAGKPEGEGFAEFSSSIPLGRLSEPEDVAGLVSFLA-SEDSDY 242

Query: 256 ITGQVLTIDGGMVM 269
           ITGQ + +DGGMV 
Sbjct: 243 ITGQTILVDGGMVY 256

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score =  199 bits (509), Expect = 7e-64
 Identities = 111/245 (45%), Positives = 150/245 (61%), Gaps = 7/245 (2%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYA---RSSKEAEEVCKEIEASGGQALTFGGD 84
             ++TG S G+GRA+A  L   G  V+V      R   EA+ V   IEA+GG+AL    D
Sbjct: 8   RVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFD 67

Query: 85  VSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQ 144
           V   A   + +   V+ +G +DIL+NNAGI  D     +   +W DVID+NL G F  TQ
Sbjct: 68  VRDFAATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQ 127

Query: 145 AAAKIMMKKKK-GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNA 203
           AA   M++ ++ GRI+NIASV G+ GN GQ NY+A+KAG+IGLTKT+A E A R I VNA
Sbjct: 128 AALPPMIRARRGGRIVNIASVAGVRGNRGQVNYAASKAGLIGLTKTLANELAPRGITVNA 187

Query: 204 IAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTI 263
           +APG I + M         + +L  +P+ R G+P+EVA LV FL  + AA Y+TGQV+ +
Sbjct: 188 VAPGAINTPMADNA--APTEHLLNPVPVQRLGEPDEVAALVAFLV-SDAASYVTGQVIPV 244

Query: 264 DGGMV 268
           DGG  
Sbjct: 245 DGGFC 249

Length = 249

>gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

 Score =  197 bits (502), Expect = 6e-63
 Identities = 107/241 (44%), Positives = 152/241 (63%), Gaps = 5/241 (2%)

Query: 29  AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKE 88
           A+VTGAS GIG  +A  L   G  V ++  R  K  E +  E+   G +   F  ++S  
Sbjct: 9   ALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEK-LEALAAEL---GERVKIFPANLSDR 64

Query: 89  ADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAK 148
            +V+++ + A      VDIL+NNAGIT+D L +RM    W  V+++NLT  F  T+    
Sbjct: 65  DEVKALGQKAEADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTH 124

Query: 149 IMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGF 208
            MM+++ GRIINI SVVG+ GN GQANY A+KAG+IG +K++A+E A+RN+ VN +APGF
Sbjct: 125 PMMRRRYGRIINITSVVGVTGNPGQANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGF 184

Query: 209 IASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMV 268
           I S MT KL +  ++ I+  IP+ R G   EVA  V +LA + AA Y+TGQ + ++GGM 
Sbjct: 185 IESAMTGKLNDKQKEAIMGAIPMKRMGTGAEVASAVAYLASSEAA-YVTGQTIHVNGGMA 243

Query: 269 M 269
           M
Sbjct: 244 M 244

Length = 245

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score =  196 bits (501), Expect = 2e-62
 Identities = 99/254 (38%), Positives = 140/254 (55%), Gaps = 14/254 (5%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEA-SGGQALTFGGDVS 86
           VA+VTG++ GIG  +A +L  AG  +++N    + E E V   + A  G + L  G D+S
Sbjct: 4   VALVTGSTSGIGLGIARALAAAGANIVLNGFGDAAEIEAVRAGLAAKHGVKVLYHGADLS 63

Query: 87  KEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
           K A +E M+  A   +G VDIL+NNAGI     +      +W  +I LNL+ VF  T+ A
Sbjct: 64  KPAAIEDMVAYAQRQFGGVDILVNNAGIQHVAPIEDFPTEKWDAIIALNLSAVFHTTRLA 123

Query: 147 AKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
              M K+  GRIINIASV GLV +  ++ Y AAK GV+GLTK VA E A   +  NAI P
Sbjct: 124 LPHMKKQGWGRIINIASVHGLVASANKSAYVAAKHGVVGLTKVVALETAGTGVTCNAICP 183

Query: 207 GFIASDMTAKLGEDLEKK------------ILEKIPLGRYGQPEEVAGLVEFLALNPAAG 254
           G++ + +  K    L +K            +LEK P  ++  PE++     FLA + AA 
Sbjct: 184 GWVLTPLVEKQISALAQKNGVPQEQAARELLLEKQPSKQFVTPEQLGDTAVFLA-SDAAS 242

Query: 255 YITGQVLTIDGGMV 268
            ITG  +++DGG  
Sbjct: 243 QITGTAVSVDGGWT 256

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score =  196 bits (500), Expect = 2e-62
 Identities = 103/249 (41%), Positives = 141/249 (56%), Gaps = 23/249 (9%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVN--------YARSSKEAEEVCKEIEASGGQAL 79
           V +VTGA  G+GRA A +  + G KV+VN          +SS  A++V  EI+A+GG+A+
Sbjct: 7   VVLVTGAGGGLGRAYALAFAERGAKVVVNDLGGDRKGSGKSSSAADKVVDEIKAAGGKAV 66

Query: 80  TFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGV 139
                V    D E ++KTA+DA+G VDIL+NNAGI RD    +M +  W  V+ ++L G 
Sbjct: 67  ANYDSV---EDGEKIVKTAIDAFGRVDILVNNAGILRDRSFAKMSEEDWDLVMRVHLKGS 123

Query: 140 FLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNI 199
           F  T+AA   M K+K GRIIN +S  GL GN GQANYSAAK G++GL+ T+A E A  NI
Sbjct: 124 FKVTRAAWPYMRKQKFGRIINTSSAAGLYGNFGQANYSAAKLGLLGLSNTLAIEGAKYNI 183

Query: 200 NVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQ 259
             N IAP    S MT        + ++ +        PE VA LV  L L   +  +TG 
Sbjct: 184 TCNTIAPA-AGSRMT--------ETVMPEDLFDALK-PEYVAPLV--LYLCHESCEVTGG 231

Query: 260 VLTIDGGMV 268
           +  +  G +
Sbjct: 232 LFEVGAGWI 240

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score =  192 bits (491), Expect = 4e-61
 Identities = 108/242 (44%), Positives = 145/242 (59%), Gaps = 5/242 (2%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEI-EASGGQALTFGGDVS 86
           VA+VTG SRGIG A+A +L +AG  V + Y  S+  AEE  +E+ +  G +   +  DVS
Sbjct: 10  VAIVTGGSRGIGLAIARALAEAGADVAIIY-NSAPRAEEKAEELAKKYGVKTKAYKCDVS 68

Query: 87  KEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
            +  VE   K     +G +DILI NAGIT     +     QW  VID+NL GVF C QAA
Sbjct: 69  SQESVEKTFKQIQKDFGKIDILIANAGITVHKPALDYTYEQWNKVIDVNLNGVFNCAQAA 128

Query: 147 AKIMMKKKKGRIINIASVVGLVGNIGQ--ANYSAAKAGVIGLTKTVAKEYASRNINVNAI 204
           AKI  K+ KG +I  AS+ G + N  Q  A Y+A+KA VI L K++A E+A   I VN+I
Sbjct: 129 AKIFKKQGKGSLIITASMSGTIVNRPQPQAAYNASKAAVIHLAKSLAVEWAKYFIRVNSI 188

Query: 205 APGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTID 264
           +PG+I +D+T  + ++L KK    IPL R   PEE+ G   +LA + A+ Y TG  L ID
Sbjct: 189 SPGYIDTDLTDFVDKELRKKWESYIPLKRIALPEELVGAYLYLA-SDASSYTTGSDLIID 247

Query: 265 GG 266
           GG
Sbjct: 248 GG 249

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score =  192 bits (490), Expect = 8e-61
 Identities = 86/242 (35%), Positives = 130/242 (53%), Gaps = 2/242 (0%)

Query: 27  PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVS 86
            VA+VT +  GIG+A A  L + G  + + +    + A+E  +E+ + G +A     D+S
Sbjct: 3   QVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLS 62

Query: 87  KEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
              +    +   +   G +D+L+NNAG       + M   +W+ +  +++ G FLC+Q A
Sbjct: 63  DLPEGAQALDKLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIA 122

Query: 147 AKIMMKK-KKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIA 205
           A+ M+K+ + GRIINI SV       G + Y+AAK  + GLTK +A E     I VNA+A
Sbjct: 123 ARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKHALGGLTKAMALELVEHGILVNAVA 182

Query: 206 PGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDG 265
           PG IA+ M      D++      IPLGR G   E+A LV +L  +  A Y TGQ L +DG
Sbjct: 183 PGAIATPMNGMDDSDVKPDSRPGIPLGRPGDTHEIASLVAWLC-SEGASYTTGQSLIVDG 241

Query: 266 GM 267
           G 
Sbjct: 242 GF 243

Length = 256

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score =  191 bits (487), Expect = 2e-60
 Identities = 97/254 (38%), Positives = 132/254 (51%), Gaps = 14/254 (5%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
            A+VTGA+ GIG A+A +L  AG  V+VN       AE   K    +GG  +    DV+K
Sbjct: 3   TALVTGAASGIGLAIARALAAAGANVVVNDFGEEG-AEAAAKVAGDAGGSVIYLPADVTK 61

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
           E ++  MI  A   +G +DIL+NNAGI     +       W  +I + LT  F   +AA 
Sbjct: 62  EDEIADMIAAAAAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAVMLTSAFHTIRAAL 121

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
             M K+  GRIINIAS  GLV +  ++ Y AAK G+IGLTK +A E A   I VNAI PG
Sbjct: 122 PHMKKQGWGRIINIASAHGLVASPFKSAYVAAKHGLIGLTKVLALEVAEHGITVNAICPG 181

Query: 208 FIASDMTAKLGEDLEKK------------ILEKIPLGRYGQPEEVAGLVEFLALNPAAGY 255
           ++ + +  K   D  K             +L+  P  R+   +EVA    +LA + AA  
Sbjct: 182 YVRTPLVEKQIADQAKTRGIPEEQVIREVMLKGQPTKRFVTVDEVAETALYLASDAAAQ- 240

Query: 256 ITGQVLTIDGGMVM 269
           ITGQ + +DGG   
Sbjct: 241 ITGQAIVLDGGWTA 254

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated

 Score =  186 bits (474), Expect = 2e-58
 Identities = 98/248 (39%), Positives = 157/248 (63%), Gaps = 9/248 (3%)

Query: 23  NVEAPVAVVTGASRGIGRAVATSLGKAGCKVL-VNYARSSKEAEEVCKEIEASGGQALTF 81
           ++E  VAVVTG   G+G+ +A  L +AGC ++ +N      E  E  +++ A G + L+ 
Sbjct: 7   SLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIV----EPTETIEQVTALGRRFLSL 62

Query: 82  GGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFL 141
             D+ K   + ++++ AV  +G +DIL+NNAG+ R    +   +  W DV++LN+  VF 
Sbjct: 63  TADLRKIDGIPALLERAVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFF 122

Query: 142 CTQAAAKIMMKKKKG-RIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNIN 200
            +QAAAK  + +  G +IINIAS++   G I   +Y+A+K+GV+G+T+ +A E+A  NIN
Sbjct: 123 MSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKSGVMGVTRLMANEWAKHNIN 182

Query: 201 VNAIAPGFIASDMTAKL--GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITG 258
           VNAIAPG++A++ T +L   E    +IL++IP GR+G P ++ G V FLA + A+ YI G
Sbjct: 183 VNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGPVVFLA-SSASDYING 241

Query: 259 QVLTIDGG 266
             + +DGG
Sbjct: 242 YTIAVDGG 249

Length = 253

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score =  184 bits (469), Expect = 1e-57
 Identities = 92/247 (37%), Positives = 137/247 (55%), Gaps = 7/247 (2%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIE-ASGGQALTFGGDVS 86
           VA +TG   GIG+A+A +  + G  V +   R  +  E   +EI  A+GG+A     DV 
Sbjct: 5   VAFITGGGTGIGKAIAKAFAELGASVAIA-GRKPEVLEAAAEEISSATGGRAHPIQCDVR 63

Query: 87  KEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
               VE+ +   +  +G +DILINNA          +  + ++ VID++L G F  T+A 
Sbjct: 64  DPEAVEAAVDETLKEFGKIDILINNAAGNFLAPAESLSPNGFKTVIDIDLNGTFNTTKAV 123

Query: 147 AKIMMK-KKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIA 205
            K +++ K  G I+NI++     G+  Q + +AAKAGV  LT+++A E+    I VNAIA
Sbjct: 124 GKRLIEAKHGGSILNISATYAYTGSPFQVHSAAAKAGVDALTRSLAVEWGPYGIRVNAIA 183

Query: 206 PGFIASDMT-AKLG--EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLT 262
           PG I +     +L      EKK++E++PLGR G PEE+A L  FL  + AA YI G  L 
Sbjct: 184 PGPIPTTEGMERLAPSGKSEKKMIERVPLGRLGTPEEIANLALFLL-SDAASYINGTTLV 242

Query: 263 IDGGMVM 269
           +DGG  +
Sbjct: 243 VDGGQWL 249

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score =  183 bits (466), Expect = 4e-57
 Identities = 89/254 (35%), Positives = 142/254 (55%), Gaps = 12/254 (4%)

Query: 23  NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKE-IEASGGQALTF 81
           +++  +A++TGAS GIG A+A +  KAG  ++ N    ++E  +         G +A  +
Sbjct: 7   SLKGKIALITGASYGIGFAIAKAYAKAGATIVFN--DINQELVDKGLAAYRELGIEAHGY 64

Query: 82  GGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFL 141
             DV+ E  V++M+       G +DIL+NNAGI +   ++ M    ++ VID++L   F+
Sbjct: 65  VCDVTDEDGVQAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFI 124

Query: 142 CTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINV 201
            ++A    M+KK  G+IINI S++  +G    + Y+AAK G+  LTK +A EY   NI  
Sbjct: 125 VSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYGEANIQC 184

Query: 202 NAIAPGFIASDMTAKLGEDLEKK--------ILEKIPLGRYGQPEEVAGLVEFLALNPAA 253
           N I PG+IA+  TA L E             I+ K P  R+G PE++AG   FLA + A+
Sbjct: 185 NGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPAARWGDPEDLAGPAVFLA-SDAS 243

Query: 254 GYITGQVLTIDGGM 267
            ++ G +L +DGG+
Sbjct: 244 NFVNGHILYVDGGI 257

Length = 265

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score =  183 bits (467), Expect = 5e-57
 Identities = 97/266 (36%), Positives = 141/266 (53%), Gaps = 23/266 (8%)

Query: 23  NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFG 82
           +++  VAV+TG    +G A+A  L +AG KV +   R+ ++AE V  EI+A+GG+AL   
Sbjct: 7   SLKGKVAVITGGGGVLGGAMAKELARAGAKVAI-LDRNQEKAEAVVAEIKAAGGEALAVK 65

Query: 83  GDVSKEADVESMIKTAVDAWGTVDILINNAG---------------ITRDTLLMRMKKSQ 127
            DV  +  +E   +  ++ +G  DILIN AG               I        + +  
Sbjct: 66  ADVLDKESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEG 125

Query: 128 WQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLT 187
           ++ V DLNL G  L TQ  AK M+ +K G IINI+S+           YSAAKA +   T
Sbjct: 126 FEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFTPLTKVPAYSAAKAAISNFT 185

Query: 188 KTVAKEYASRNINVNAIAPGFIASDMTAKL--GEDLE-----KKILEKIPLGRYGQPEEV 240
           + +A  +A   I VNAIAPGF  ++    L   ED        KIL   P+GR+G+PEE+
Sbjct: 186 QWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAHTPMGRFGKPEEL 245

Query: 241 AGLVEFLALNPAAGYITGQVLTIDGG 266
            G + +LA   A+ ++TG VL +DGG
Sbjct: 246 LGTLLWLADEKASSFVTGVVLPVDGG 271

Length = 278

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score =  182 bits (463), Expect = 7e-57
 Identities = 91/245 (37%), Positives = 139/245 (56%), Gaps = 6/245 (2%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA+VTG + GIGRA A +  + G KV+V   R +   EE    I  +GG+AL    DV++
Sbjct: 9   VALVTGGAAGIGRATALAFAREGAKVVVA-DRDAAGGEETVALIREAGGEALFVACDVTR 67

Query: 88  EADVESMIKTAVDAWGTVDILINNAGIT-RDTLLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
           +A+V+++++  + A+G +D   NNAGI      L    ++++  ++ +N+ GV+LC +  
Sbjct: 68  DAEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQ 127

Query: 147 AKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
             +M+ +  G I+N ASV GL      + Y+A+K  VIGLTK+ A EYA + I VNA+ P
Sbjct: 128 IPLMLAQGGGAIVNTASVAGLGAAPKMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCP 187

Query: 207 GFIASDMTAKLGE-DLEKK--ILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTI 263
             I +DM  +  E D  K        P+GR G+ EEVA  V +L  +  A + TG  L +
Sbjct: 188 AVIDTDMFRRAYEADPRKAEFAAAMHPVGRIGKVEEVASAVLYLC-SDGASFTTGHALMV 246

Query: 264 DGGMV 268
           DGG  
Sbjct: 247 DGGAT 251

Length = 253

>gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score =  182 bits (462), Expect = 1e-56
 Identities = 102/248 (41%), Positives = 155/248 (62%), Gaps = 9/248 (3%)

Query: 23  NVEAPVAVVTGASRGIGRAVATSLGKAGCKVL-VNYARSSKEAEEVCKEIEASGGQALTF 81
           ++   VA++TG + G+G+ +A  L KAG  ++ V  A    EA E   ++EA G +    
Sbjct: 5   DLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVA----EAPETQAQVEALGRKFHFI 60

Query: 82  GGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFL 141
             D+ ++ D++S++  AV+  G +DILINNAGI R   L+      W DVI++N   VF 
Sbjct: 61  TADLIQQKDIDSIVSQAVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFF 120

Query: 142 CTQAAAKIMMKKKKG-RIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNIN 200
            +QA AK  +K+  G +IINIAS++   G I   +Y+A+K+ V+GLT+ +A E +  NIN
Sbjct: 121 LSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTASKSAVMGLTRALATELSQYNIN 180

Query: 201 VNAIAPGFIASDMTAKLGEDLEKK--ILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITG 258
           VNAIAPG++A+D TA L  D  +   ILE+IP  R+G P+++AG   FL+ + A+ Y+TG
Sbjct: 181 VNAIAPGYMATDNTAALRADTARNEAILERIPASRWGTPDDLAGPAIFLS-SSASDYVTG 239

Query: 259 QVLTIDGG 266
             L +DGG
Sbjct: 240 YTLAVDGG 247

Length = 251

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score =  181 bits (461), Expect = 1e-56
 Identities = 96/249 (38%), Positives = 149/249 (59%), Gaps = 4/249 (1%)

Query: 23  NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFG 82
           +++  VA VTGA  GIG+ +A  L +AG  V +   R+     E  + IEA+G +A+   
Sbjct: 5   DLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIA 64

Query: 83  GDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLC 142
            DV+ +AD+ + +       G + + +N AGI        M++ QWQ V+D+NLTGVFL 
Sbjct: 65  ADVTSKADLRAAVARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLS 124

Query: 143 TQAAAKIMMKKKKGRIINIASVVGLVGNIG--QANYSAAKAGVIGLTKTVAKEYASRNIN 200
            QA A+ M++   G I+NIAS+ G++ N G  QA+Y+A+KAGVI L+K++A E+  R I 
Sbjct: 125 CQAEARAMLENGGGSIVNIASMSGIIVNRGLLQAHYNASKAGVIHLSKSLAMEWVGRGIR 184

Query: 201 VNAIAPGFIASDMTAKLGEDLEKKILEK-IPLGRYGQPEEVAGLVEFLALNPAAGYITGQ 259
           VN+I+PG+ A+ M  +     + K+ E+  P+ R  + +E+ G   FL L+ AA + TG 
Sbjct: 185 VNSISPGYTATPMNTRPEMVHQTKLFEEQTPMQRMAKVDEMVGPAVFL-LSDAASFCTGV 243

Query: 260 VLTIDGGMV 268
            L +DGG V
Sbjct: 244 DLLVDGGFV 252

Length = 254

>gnl|CDD|130890 TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-protein) reductase, putative

 Score =  181 bits (460), Expect = 1e-56
 Identities = 102/240 (42%), Positives = 144/240 (60%), Gaps = 3/240 (1%)

Query: 30  VVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEA 89
           +VTGASRGIGRA+A  L   G ++ V+Y     +AE V   I+A GG A     DV+   
Sbjct: 2   LVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRV 61

Query: 90  DVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKI 149
              ++++  +   G    ++ NAGITRD     + +  W  VI  NL G +         
Sbjct: 62  ACRTLLEADIAEHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMP 121

Query: 150 MMKKKKG-RIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGF 208
           M++ ++G RII +ASV G++GN GQ NYSAAKAG+IG TK +A E A R I VN IAPG 
Sbjct: 122 MIRARQGGRIITLASVSGVMGNRGQVNYSAAKAGLIGATKALAVELAKRKITVNCIAPGL 181

Query: 209 IASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMV 268
           I ++M A++  DL  + L+ +P+ R GQP EVA L  FL ++  A Y+T QV++++GGMV
Sbjct: 182 IDTEMLAEVEHDL-DEALKTVPMNRMGQPAEVASLAGFL-MSDGASYVTRQVISVNGGMV 239

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  183 bits (468), Expect = 3e-55
 Identities = 96/273 (35%), Positives = 142/273 (52%), Gaps = 39/273 (14%)

Query: 8   AQVATIEQATNEAAQNVEAP----VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKE 63
            QV  +  A      + + P    VA+VTGA+RGIG A+A  L + G  V+     ++ E
Sbjct: 188 GQVVRVGAADAAPPADWDRPLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGE 247

Query: 64  A-EEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMR 122
           A   V   +   GG AL    D++       + +   +  G +DI+++NAGITRD  L  
Sbjct: 248 ALAAVANRV---GGTALAL--DITAPDAPARIAEHLAERHGGLDIVVHNAGITRDKTLAN 302

Query: 123 MKKSQWQDVIDLNLTGVFLCTQA--AAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAK 180
           M +++W  V+ +NL      T+A  AA  +     GRI+ ++S+ G+ GN GQ NY+A+K
Sbjct: 303 MDEARWDSVLAVNLLAPLRITEALLAAGAL--GDGGRIVGVSSISGIAGNRGQTNYAASK 360

Query: 181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPL-----GRY- 234
           AGVIGL + +A   A R I +NA+APGFI + MTA             IP      GR  
Sbjct: 361 AGVIGLVQALAPLLAERGITINAVAPGFIETQMTA------------AIPFATREAGRRM 408

Query: 235 ------GQPEEVAGLVEFLALNPAAGYITGQVL 261
                 G P +VA  + +LA +PA+G +TG V+
Sbjct: 409 NSLQQGGLPVDVAETIAWLA-SPASGGVTGNVV 440

Length = 450

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score =  177 bits (451), Expect = 5e-55
 Identities = 90/242 (37%), Positives = 136/242 (56%), Gaps = 4/242 (1%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA+VTG++RG+G  +A +L  AG  VLVN  R++   E     + A+GG A     D++ 
Sbjct: 13  VALVTGSARGLGFEIARALAGAGAHVLVN-GRNAATLEAAVAALRAAGGAAEALAFDIAD 71

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
           E  V +         G +DIL+NN G      L  +  +  + +++ +L    L ++ AA
Sbjct: 72  EEAVAAAFARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAA 131

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
           + M ++  GRII I S+ G V   G A Y AAK G+ GL + +A E+    I  NAIAPG
Sbjct: 132 QRMKRQGYGRIIAITSIAGQVARAGDAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPG 191

Query: 208 FIASDMTAKLGED--LEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDG 265
           + A++  A +  D  +   + ++ PLGR+G+PEE+AG   FLA +PAA Y+ G VL +DG
Sbjct: 192 YFATETNAAMAADPAVGPWLAQRTPLGRWGRPEEIAGAAVFLA-SPAASYVNGHVLAVDG 250

Query: 266 GM 267
           G 
Sbjct: 251 GY 252

Length = 256

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score =  177 bits (451), Expect = 6e-55
 Identities = 85/257 (33%), Positives = 137/257 (53%), Gaps = 17/257 (6%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGG--QALTFGGDV 85
           VAVV G  + +G  +   L + G +V V    S K A  V +EI A  G   A  FG D 
Sbjct: 4   VAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEK-AANVAQEINAEYGEGMAYGFGADA 62

Query: 86  SKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQA 145
           + E  V ++ +   + +G VD+L+ NAGI +   +   +   +   + +NL G FLC + 
Sbjct: 63  TSEQSVLALSRGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCARE 122

Query: 146 AAKIMMKKK-KGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAI 204
            +++M++   +GRII I S  G VG+   + YSAAK G +GLT+++A + A   I V+++
Sbjct: 123 FSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLAEYGITVHSL 182

Query: 205 APG-FIASDM--------TAKLG---EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPA 252
             G  + S M          KLG   +++E+  ++K+PL R    ++V  ++ F A +P 
Sbjct: 183 MLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVLNMLLFYA-SPK 241

Query: 253 AGYITGQVLTIDGGMVM 269
           A Y TGQ + + GG VM
Sbjct: 242 ASYCTGQSINVTGGQVM 258

Length = 259

>gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  176 bits (449), Expect = 4e-54
 Identities = 106/253 (41%), Positives = 143/253 (56%), Gaps = 15/253 (5%)

Query: 24  VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGG 83
           +   VAVVTGA+ G+GRA A  L + G  V+VN   S+ +A +V  EI A+G +A+   G
Sbjct: 10  LSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAG 69

Query: 84  DVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCT 143
           D+S+ A  + ++ TA    G +DI++NNAGITRD +L  M   +W  VI ++L G FL T
Sbjct: 70  DISQRATADELVATA-VGLGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLT 128

Query: 144 QAAAKIMMKKKK-------GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYAS 196
           + AA     K K       GRI+N +S  GLVG +GQANY AAKAG+  LT + A+    
Sbjct: 129 RNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQANYGAAKAGITALTLSAARALGR 188

Query: 197 RNINVNAIAPGFIASDMTAKLGEDLEKKILEKI-PLGRYGQPEEVAGLVEFLALNPAAGY 255
             +  NAI P    + MTA +  D        I PL     PE V  LV+FLA +PAA  
Sbjct: 189 YGVRANAICPR-ARTAMTADVFGDAPDVEAGGIDPLS----PEHVVPLVQFLA-SPAAAE 242

Query: 256 ITGQVLTIDGGMV 268
           + GQV  + G MV
Sbjct: 243 VNGQVFIVYGPMV 255

Length = 306

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score =  174 bits (443), Expect = 6e-54
 Identities = 96/243 (39%), Positives = 138/243 (56%), Gaps = 6/243 (2%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA+VTGASRGIG A+A  L   G  V VNYA S+  A+E+  EIEA+GG+A+    DV+ 
Sbjct: 7   VAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVAD 66

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
            A V  +   A  A+G +D+L+NNAG+     +       +   I  NL G F+  + AA
Sbjct: 67  AAAVTRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAA 126

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
           + +   + GRIIN+++ V  +   G   Y+A+KA V GL   +A E   R I VNA+APG
Sbjct: 127 RHL--GQGGRIINLSTSVIALPLPGYGPYAASKAAVEGLVHVLANELRGRGITVNAVAPG 184

Query: 208 FIASDMTAKLGEDLE--KKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDG 265
            +A+++    G+  E   ++    PL R G PEE+A  V FLA  P   ++ GQVL ++G
Sbjct: 185 PVATELFFN-GKSAEQIDQLAGLAPLERLGTPEEIAAAVAFLA-GPDGAWVNGQVLRVNG 242

Query: 266 GMV 268
           G  
Sbjct: 243 GFA 245

Length = 245

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  173 bits (440), Expect = 2e-53
 Identities = 98/248 (39%), Positives = 134/248 (54%), Gaps = 18/248 (7%)

Query: 27  PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVS 86
            V VVTG+ RGIGRA+A  L K G  V+VN  + ++E  E  K ++ +GG+ +    DVS
Sbjct: 7   KVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVS 66

Query: 87  KEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
                E++ K  +D +G  DIL+NNAG+   +  + +        I  +   V  C+Q  
Sbjct: 67  TREGCETLAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQEL 126

Query: 147 AKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
           AK M  ++ G I+NIASV G+    G + Y A KA VI LTK +A E A + I VNAIAP
Sbjct: 127 AKEM--REGGAIVNIASVAGIRPAYGLSIYGAMKAAVINLTKYLALELAPK-IRVNAIAP 183

Query: 207 GFIASDMTAKLGEDL-------EKKILEKIPL-GRYGQPEEVAGLVEFLALNPAAGYITG 258
           GF+ +    KLGE L       EK+  EK  L G+   PEEVA  V  +    +   ITG
Sbjct: 184 GFVKT----KLGESLFKVLGMSEKEFAEKFTLMGKILDPEEVAEFVAAILKIES---ITG 236

Query: 259 QVLTIDGG 266
           QV  +D G
Sbjct: 237 QVFVLDSG 244

Length = 252

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score =  173 bits (440), Expect = 3e-53
 Identities = 99/266 (37%), Positives = 145/266 (54%), Gaps = 22/266 (8%)

Query: 22  QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTF 81
            +++  VAV+TG +  +G A+A +L +AG KV     R+ ++ ++V KEI A GG+A+  
Sbjct: 1   FSLKNKVAVITGGTGVLGGAMARALAQAGAKVAA-LGRNQEKGDKVAKEITALGGRAIAL 59

Query: 82  GGDVSKEADVESMIKTAVDAWGTVDILINNAG--------------ITRDTLLMRMKKSQ 127
             DV   A +E   +  V  +GTVDILIN AG                 +     + +  
Sbjct: 60  AADVLDRASLERAREEIVAQFGTVDILINGAGGNHPDATTDPEHYEPETEQNFFDLDEEG 119

Query: 128 WQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLT 187
           W+ V DLNL G FL +Q   K M+++K G IINI+S+           YSAAKA V   T
Sbjct: 120 WEFVFDLNLNGSFLPSQVFGKDMLEQKGGSIINISSMNAFSPLTKVPAYSAAKAAVSNFT 179

Query: 188 KTVAKEYASRNINVNAIAPGFIASDMTAKL-------GEDLEKKILEKIPLGRYGQPEEV 240
           + +A E+A+  + VNAIAPGF  +    KL         D   KIL + P+GR+G+PEE+
Sbjct: 180 QWLAVEFATTGVRVNAIAPGFFVTPQNRKLLINPDGSYTDRSNKILGRTPMGRFGKPEEL 239

Query: 241 AGLVEFLALNPAAGYITGQVLTIDGG 266
            G + FLA   A+ ++TG V+ +DGG
Sbjct: 240 LGALLFLASEKASSFVTGVVIPVDGG 265

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score =  172 bits (438), Expect = 4e-53
 Identities = 94/246 (38%), Positives = 136/246 (55%), Gaps = 7/246 (2%)

Query: 26  APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDV 85
             V ++TG S G+G+A+A    + G  V++   R+ ++ EE   EIE   GQ LT   DV
Sbjct: 1   EKVVIITGGSSGMGKAMAKRFAEEGANVVIT-GRTKEKLEEAKLEIEQFPGQVLTVQMDV 59

Query: 86  SKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQA 145
               DV+ M++   + +G +D LINNA          +  + W  VID+ L G F C+QA
Sbjct: 60  RNPEDVQKMVEQIDEKFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQA 119

Query: 146 AAKIMMKKK-KGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASR-NINVNA 203
             K  ++K  KG IIN+ +        G  + +AAKAGV+ +T+T+A E+  +  I VNA
Sbjct: 120 VGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNA 179

Query: 204 IAPGFIASDMTAK---LGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQV 260
           IAPG I     A      E+  K+ ++ +PLGR G PEE+AGL  FL L+  A YI G  
Sbjct: 180 IAPGPIERTGGADKLWESEEAAKRTIQSVPLGRLGTPEEIAGLAYFL-LSDEAAYINGTC 238

Query: 261 LTIDGG 266
           +T+DGG
Sbjct: 239 ITMDGG 244

Length = 252

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score =  172 bits (438), Expect = 4e-53
 Identities = 97/253 (38%), Positives = 149/253 (58%), Gaps = 14/253 (5%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA+VTG ++GIG+ +A  L K G  V V    + + A+E  KEI  +GG+A+ +  DVS 
Sbjct: 2   VALVTGGAQGIGKGIAERLAKDGFAVAVA-DLNEETAKETAKEINQAGGKAVAYKLDVSD 60

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
           +  V S I  A + +G  D+++NNAG+   T ++ + + + + V ++N+ GV    QAAA
Sbjct: 61  KDQVFSAIDQAAEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAA 120

Query: 148 KIMMKKK-KGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
           +   K+   G+IIN AS+ G  GN   + YS+ K  V GLT+T A+E A + I VNA  P
Sbjct: 121 RQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCP 180

Query: 207 GFIASDM-------TAKLG----EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGY 255
           G + + M       T+++      +  ++   +I LGR  +PE+VAGLV FLA +  + Y
Sbjct: 181 GIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPEDVAGLVSFLA-SEDSDY 239

Query: 256 ITGQVLTIDGGMV 268
           ITGQ + +DGGMV
Sbjct: 240 ITGQSILVDGGMV 252

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score =  172 bits (438), Expect = 5e-53
 Identities = 86/256 (33%), Positives = 138/256 (53%), Gaps = 26/256 (10%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLV---NYARSSKEAEEVCKEIEASGG-QALTFGG 83
           + ++TGA+  IG+A   +L  AG ++++   N        E++ +E+      + +    
Sbjct: 4   IILITGAAGLIGKAFCKALLSAGARLILADINAPA----LEQLKEELTNLYKNRVIALEL 59

Query: 84  DVSKEADVESMIKTAVDAWGTVDILINNAGIT---RDTLLMRMKKSQWQDVIDLNLTGVF 140
           D++ +  ++ +I++ ++ +G +DILINNA  +     +        QW +V+++NL G F
Sbjct: 60  DITSKESIKELIESYLEKFGRIDILINNAYPSPKVWGSRFEEFPYEQWNEVLNVNLGGAF 119

Query: 141 LCTQAAAKIMMKKKKGRIINIASVVGLVG----NIGQAN------YSAAKAGVIGLTKTV 190
           LC+QA  K+  K+ KG IINIAS+ G++                 YS  KAG+I LTK +
Sbjct: 120 LCSQAFIKLFKKQGKGSIINIASIYGVIAPDFRIYENTQMYSPVEYSVIKAGIIHLTKYL 179

Query: 191 AKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALN 250
           AK YA   I VNAI+PG I          +  +K  +K PL R   PE++ G + FL L+
Sbjct: 180 AKYYADTGIRVNAISPGGIL----NNQPSEFLEKYTKKCPLKRMLNPEDLRGAIIFL-LS 234

Query: 251 PAAGYITGQVLTIDGG 266
            A+ Y+TGQ L IDGG
Sbjct: 235 DASSYVTGQNLVIDGG 250

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187535 cd02266, SDR, Short-chain dehydrogenases/reductases (SDR)

 Score =  170 bits (432), Expect = 5e-53
 Identities = 64/227 (28%), Positives = 90/227 (39%), Gaps = 47/227 (20%)

Query: 29  AVVTGASRGIGRAVATSLGKAG-CKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
            +VTG S GIG A+A  L   G  KVLV   R                            
Sbjct: 1   VLVTGGSGGIGGAIARWLASRGSPKVLVVSRR---------------------------- 32

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
                             D++++NA I  D  L+ +  S+ +  I  N+ G     +AA 
Sbjct: 33  ------------------DVVVHNAAILDDGRLIDLTGSRIERAIRANVVGTRRLLEAAR 74

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
           ++M  K+ GR I I+SV GL G  G   Y+A+KA + GL +  A E     +   A+A G
Sbjct: 75  ELMKAKRLGRFILISSVAGLFGAPGLGGYAASKAALDGLAQQWASEGWGNGLPATAVACG 134

Query: 208 FIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAG 254
             A    AK     E+ +  +    R   PEEVA  +      P AG
Sbjct: 135 TWAGSGMAKGPVAPEEILGNRRHGVRTMPPEEVARALLNALDRPKAG 181

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase (KR) domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 186

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score =  171 bits (435), Expect = 1e-52
 Identities = 100/253 (39%), Positives = 143/253 (56%), Gaps = 15/253 (5%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA+VTGA+ GIG A+A  LGK G +V V  AR  +      KE+  +G +A     DV  
Sbjct: 5   VALVTGATSGIGLAIARRLGKEGLRVFV-CARGEEGLATTVKELREAGVEADGRTCDVRS 63

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQA-- 145
             ++E+++  AV  +G +D+L+NNAG +       +    W DV++ NLTGVF  T+   
Sbjct: 64  VPEIEALVAAAVARYGPIDVLVNNAGRSGGGATAELADELWLDVVETNLTGVFRVTKEVL 123

Query: 146 AAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIA 205
            A  M+++  GRIINIAS  G  G +  A YSA+K GV+G TK +  E A   I VNA+ 
Sbjct: 124 KAGGMLERGTGRIINIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVC 183

Query: 206 PGFIASDMTAKL-----------GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAG 254
           PGF+ + M A +            E+   +I  ++PLGRY  PEEVAG+V +L  + AA 
Sbjct: 184 PGFVETPMAASVREHYADIWEVSTEEAFDRITARVPLGRYVTPEEVAGMVAYLIGDGAAA 243

Query: 255 YITGQVLTIDGGM 267
            +T Q L + GG+
Sbjct: 244 -VTAQALNVCGGL 255

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score =  170 bits (433), Expect = 2e-52
 Identities = 90/242 (37%), Positives = 130/242 (53%), Gaps = 10/242 (4%)

Query: 27  PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVS 86
            VA+VTGA++ IGRA+A +L   G +V+V+Y RS  EA+ +  E+ A    A+    D+S
Sbjct: 1   AVALVTGAAKRIGRAIAEALAAEGYRVVVHYNRSEAEAQRLKDELNALRNSAVLVQADLS 60

Query: 87  KEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
             A    ++  A  A+G  D+L+NNA     T L +  +  W ++  +NL   +L  QA 
Sbjct: 61  DFAACADLVAAAFRAFGRCDVLVNNASAFYPTPLGQGSEDAWAELFGINLKAPYLLIQAF 120

Query: 147 AKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
           A+ +   + G IINI   +      G   Y  +KA + GLT++ A E A  NI VN IAP
Sbjct: 121 ARRLAGSRNGSIINIIDAMTDRPLTGYFAYCMSKAALEGLTRSAALELAP-NIRVNGIAP 179

Query: 207 GFI--ASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTID 264
           G I    DM A+  E+     L K+PL R    EE+A  V FL  +    YITGQ++ +D
Sbjct: 180 GLILLPEDMDAEYREN----ALRKVPLKRRPSAEEIADAVIFLLDSN---YITGQIIKVD 232

Query: 265 GG 266
           GG
Sbjct: 233 GG 234

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score =  169 bits (431), Expect = 5e-52
 Identities = 95/248 (38%), Positives = 140/248 (56%), Gaps = 13/248 (5%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKE-AEEVCKEIEASGGQALTFGGDVS 86
           VA+VTGA+ GIG+A A +L + G  V+V  A  + E AE V K+I A GG A+    DVS
Sbjct: 8   VAIVTGAAGGIGQAYAEALAREGASVVV--ADINAEGAERVAKQIVADGGTAIAVQVDVS 65

Query: 87  KEADVESMIKTAVDAWGTVDILINNAGITRD---TLLMRMKKSQWQDVIDLNLTGVFLCT 143
                ++M    V A+G +D L+NNA I       LL+ +    ++  + +NL G  +CT
Sbjct: 66  DPDSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCT 125

Query: 144 QAAAKIMMKKKKGRIINIASVVG-LVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
           +A  K M K+  G I+N +S    L  N     Y  AK G+ GLT+ +A+E    NI VN
Sbjct: 126 RAVYKHMAKRGGGAIVNQSSTAAWLYSNF----YGLAKVGLNGLTQQLARELGGMNIRVN 181

Query: 203 AIAPGFIASDMT-AKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL 261
           AIAPG I ++ T     ++    +++ IPL R G PE++ G+  FL L+  A +ITGQ+ 
Sbjct: 182 AIAPGPIDTEATRTVTPKEFVADMVKGIPLSRMGTPEDLVGMCLFL-LSDEASWITGQIF 240

Query: 262 TIDGGMVM 269
            +DGG ++
Sbjct: 241 NVDGGQII 248

Length = 250

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score =  169 bits (430), Expect = 8e-52
 Identities = 92/255 (36%), Positives = 143/255 (56%), Gaps = 16/255 (6%)

Query: 27  PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVS 86
           PVA+VTGASRGIGRA+AT L   G  + +N      +A EV  E+ A+G +A+ F  D+ 
Sbjct: 2   PVAIVTGASRGIGRAIATELAARGFDIAINDLPDDDQATEVVAEVLAAGRRAIYFQADIG 61

Query: 87  KEADVESMIKTAVDAWGTVDILINNAGIT--RDTLLMRMKKSQWQDVIDLNLTGVFLCTQ 144
           + +D E+++  A + +G +D L+NNAGI       L+ + +  +  +I +NL G F  TQ
Sbjct: 62  ELSDHEALLDQAWEDFGRLDCLVNNAGIAVRPRGDLLDLTEDSFDRLIAINLRGPFFLTQ 121

Query: 145 AAAKIMMKKKK------GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRN 198
           A A+ M+++          II + S+   + +  +  Y  +KAG+   T+ +A   A   
Sbjct: 122 AVARRMVEQPDRFDGPHRSIIFVTSINAYLVSPNRGEYCISKAGLSMATRLLAYRLADEG 181

Query: 199 INVNAIAPGFIASDMTAKLGEDLEKKILE-KIPLGRYGQPEEVAGLVEFLALNPAAG--- 254
           I V+ I PG I +DMTA + E  ++ I    +P+ R+GQPE++A  V  L    A+G   
Sbjct: 182 IAVHEIRPGLIHTDMTAPVKEKYDELIAAGLVPIRRWGQPEDIAKAVRTL----ASGLLP 237

Query: 255 YITGQVLTIDGGMVM 269
           Y TGQ + IDGG+ M
Sbjct: 238 YSTGQPINIDGGLSM 252

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score =  168 bits (428), Expect = 1e-51
 Identities = 83/251 (33%), Positives = 135/251 (53%), Gaps = 15/251 (5%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           V +VTGASRG+G A+A S  + G +V+VNY RS++ AE V  E    G +A+    DV  
Sbjct: 2   VVLVTGASRGLGAAIARSFAREGARVVVNYYRSTESAEAVAAEA---GERAIAIQADVRD 58

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQ-----WQDV---IDLNLTGV 139
              V++MI+ A + +G VD ++NNA    D      ++       W+D    ++  + G 
Sbjct: 59  RDQVQAMIEEAKNHFGPVDTIVNNA--LIDFPFDPDQRKTFDTIDWEDYQQQLEGAVKGA 116

Query: 140 FLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNI 199
               QA      ++  GR+INI + +     +   +Y+ AKA ++G T+ +AKE     I
Sbjct: 117 LNLLQAVLPDFKERGSGRVINIGTNLFQNPVVPYHDYTTAKAALLGFTRNMAKELGPYGI 176

Query: 200 NVNAIAPGFI-ASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITG 258
            VN ++ G +  +D +A   +++   I +  PLG+   P+++A  V F A +P A  +TG
Sbjct: 177 TVNMVSGGLLKVTDASAATPKEVFDAIAQTTPLGKVTTPQDIADAVLFFA-SPWARAVTG 235

Query: 259 QVLTIDGGMVM 269
           Q L +DGG+VM
Sbjct: 236 QNLVVDGGLVM 246

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional

 Score =  168 bits (428), Expect = 1e-51
 Identities = 89/244 (36%), Positives = 135/244 (55%), Gaps = 6/244 (2%)

Query: 25  EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS-GGQALTFGG 83
            A VA++TG +R IG A+A +L  AG +V ++Y RS+ EA+ +  E+ A   G A     
Sbjct: 5   SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQA 64

Query: 84  DVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCT 143
           D+     +  ++   V A+G +D L+NNA     T L  + ++QW D+   NL   F  +
Sbjct: 65  DLLDPDALPELVAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLS 124

Query: 144 QAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNA 203
           QAAA   ++K++G I+NI  +       G   Y AAKA +  LT+++A E A   + VNA
Sbjct: 125 QAAAP-QLRKQRGAIVNITDIHAERPLKGYPVYCAAKAALEMLTRSLALELAP-EVRVNA 182

Query: 204 IAPGFIA-SDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLT 262
           +APG I   +      E+  + IL + PL R G PE++A  V FL  +  A +ITGQ+L 
Sbjct: 183 VAPGAILWPEDGNSFDEEARQAILARTPLKRIGTPEDIAEAVRFLLAD--ASFITGQILA 240

Query: 263 IDGG 266
           +DGG
Sbjct: 241 VDGG 244

Length = 249

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score =  167 bits (426), Expect = 3e-51
 Identities = 92/244 (37%), Positives = 132/244 (54%), Gaps = 14/244 (5%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VAVVTG + GIG A+A      G +V +     S++  EV  ++   GG A     DVS 
Sbjct: 17  VAVVTGGASGIGHAIAELFAAKGARVAL--LDRSEDVAEVAAQLL--GGNAKGLVCDVSD 72

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
              VE+ +   + A+G +DIL+N+AG+        + +  W   ID+NL G FL  QA  
Sbjct: 73  SQSVEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVG 132

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
           + M+    G+I+N+AS  G+V       Y A+KAGV+G+TK +A E+    I VNAI+P 
Sbjct: 133 RHMIAAGGGKIVNLASQAGVVALERHVAYCASKAGVVGMTKVLALEWGPYGITVNAISPT 192

Query: 208 FIASDMTAK-----LGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLT 262
            + +++  K      GE  +K     IP GR+  PEE+A    FLA + AA  ITG+ L 
Sbjct: 193 VVLTELGKKAWAGEKGERAKK----LIPAGRFAYPEEIAAAALFLA-SDAAAMITGENLV 247

Query: 263 IDGG 266
           IDGG
Sbjct: 248 IDGG 251

Length = 255

>gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional

 Score =  167 bits (426), Expect = 7e-51
 Identities = 92/262 (35%), Positives = 139/262 (53%), Gaps = 24/262 (9%)

Query: 24  VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKE--------AEEVCKEIEASG 75
           ++  V +VTGA  GIGRA A +    G +V+VN      +        A+ V  EI A+G
Sbjct: 4   LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAG 63

Query: 76  GQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLN 135
           G+A+  G D++      +++  AV+ +G +D+L+NNAGI RD ++  M + +W  VI ++
Sbjct: 64  GEAVANGDDIADWDGAANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVH 123

Query: 136 LTGVFLCTQAAAKIMMKKKK------GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKT 189
           L G F   + AA     + K       RIIN +S  GL G++GQ NYSAAKAG+  LT  
Sbjct: 124 LKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGSVGQGNYSAAKAGIAALTLV 183

Query: 190 VAKEYASRNINVNAIAPGFIA-SDMTAKLGEDLEKKILEKIPLGR--YGQPEEVAGLVEF 246
            A E     + VNAIAP   A + MT  +  ++  K  E    G      PE V+ LV +
Sbjct: 184 AAAELGRYGVTVNAIAP--AARTRMTETVFAEMMAKPEE----GEFDAMAPENVSPLVVW 237

Query: 247 LALNPAAGYITGQVLTIDGGMV 268
           L  +  +  +TG+V  ++GG +
Sbjct: 238 LG-SAESRDVTGKVFEVEGGKI 258

Length = 286

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  166 bits (423), Expect = 8e-51
 Identities = 91/248 (36%), Positives = 144/248 (58%), Gaps = 8/248 (3%)

Query: 22  QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTF 81
             ++  VA+VTG +RG+G A A  L   G KV+++     +E +    E+   G  A  F
Sbjct: 1   NRLKGKVAIVTGGARGLGLAHARLLVAEGAKVVLS-DILDEEGQAAAAEL---GDAARFF 56

Query: 82  GGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFL 141
             DV+ E    +++ TA +A+G +D+L+NNAGI     +      +W+ ++D+NLTGVFL
Sbjct: 57  HLDVTDEDGWTAVVDTAREAFGRLDVLVNNAGILTGGTVETTTLEEWRRLLDINLTGVFL 116

Query: 142 CTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASR--NI 199
            T+A    M +   G IIN++S+ GLVG+   A Y+A+K  V GLTK+ A E A++   I
Sbjct: 117 GTRAVIPPMKEAGGGSIINMSSIEGLVGDPALAAYNASKGAVRGLTKSAALECATQGYGI 176

Query: 200 NVNAIAPGFIASDMTAKLGEDLEKKILEKI-PLGRYGQPEEVAGLVEFLALNPAAGYITG 258
            VN++ PG+I + MT +L     +       P+GR G+P+E+A  V +LA +  + ++TG
Sbjct: 177 RVNSVHPGYIYTPMTDELLIAQGEMGNYPNTPMGRAGEPDEIAYAVVYLASD-ESSFVTG 235

Query: 259 QVLTIDGG 266
             L +DGG
Sbjct: 236 SELVVDGG 243

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score =  166 bits (423), Expect = 8e-51
 Identities = 84/248 (33%), Positives = 135/248 (54%), Gaps = 5/248 (2%)

Query: 23  NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFG 82
           N+E   A+VTG ++GIG A+   L   G +V    AR+ KE +E   E    G +     
Sbjct: 3   NLEGKTALVTGGTKGIGYAIVEELAGLGAEVYT-CARNQKELDECLTEWREKGFKVEGSV 61

Query: 83  GDVSKEADVESMIKTAVDAW-GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFL 141
            DVS  ++ + ++ T    + G ++IL+NNAG           +  +  ++  N    + 
Sbjct: 62  CDVSSRSERQELMDTVASHFGGKLNILVNNAGTNIRKEAKDYTEEDYSLIMSTNFEAAYH 121

Query: 142 CTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINV 201
            ++ A  ++     G I+ I+SV G++     A Y A K  +  LT+++A E+A  NI V
Sbjct: 122 LSRLAHPLLKASGNGNIVFISSVAGVIAVPSGAPYGATKGALNQLTRSLACEWAKDNIRV 181

Query: 202 NAIAPGFIASDMTAKLGEDLE--KKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQ 259
           NA+AP  IA+ +   + +  E   K++E+ PL R+G+PEEVA LV FL + PAA YITGQ
Sbjct: 182 NAVAPWVIATPLVEPVIQQKENLDKVIERTPLKRFGEPEEVAALVAFLCM-PAASYITGQ 240

Query: 260 VLTIDGGM 267
           ++ +DGG+
Sbjct: 241 IIAVDGGL 248

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  166 bits (423), Expect = 8e-51
 Identities = 84/253 (33%), Positives = 132/253 (52%), Gaps = 12/253 (4%)

Query: 27  PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVS 86
           PVA+VTG  RGIG  +A +L  AG  + +N     +E     +E+ A G + + F  DV+
Sbjct: 3   PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVA 62

Query: 87  KEADVESMIKTAVDAWGTVDILINNAGI---TRDTLLMRMKKSQWQDVIDLNLTGVFLCT 143
             +  E+M+  A  AWG +D L+NNAG+    R  LL  +    +  V+ +NL G F  T
Sbjct: 63  DLSAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLL-DLTPESFDRVLAINLRGPFFLT 121

Query: 144 QAAAKIMMKKKKGR------IINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASR 197
           QA AK M+ + +        I+ ++SV  ++ +  +  Y  +KAG+    +  A   A  
Sbjct: 122 QAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEYCISKAGLSMAAQLFAARLAEE 181

Query: 198 NINVNAIAPGFIASDMTAKLGEDLEKKILEKI-PLGRYGQPEEVAGLVEFLALNPAAGYI 256
            I V  + PG I +DMTA +    +  I + + P+ R+G+PE+VA  V  LA      Y 
Sbjct: 182 GIGVYEVRPGLIKTDMTAPVTAKYDALIAKGLVPMPRWGEPEDVARAVAALASG-DLPYS 240

Query: 257 TGQVLTIDGGMVM 269
           TGQ + +DGG+ +
Sbjct: 241 TGQAIHVDGGLSI 253

Length = 256

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score =  166 bits (423), Expect = 1e-50
 Identities = 90/252 (35%), Positives = 134/252 (53%), Gaps = 17/252 (6%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
             +VTG + GIGRA+A +  +AG +V V    S              G +      DV+ 
Sbjct: 13  RVLVTGGASGIGRAIAEAFAEAGARVHVC-DVSEAALAATAAR--LPGAKVTATVADVAD 69

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMR-MKKSQWQDVIDLNLTGVFLCTQAA 146
            A VE +  TAV+ +G +D+L+NNAGI   T  +  +   QW+  + +NL G F   +AA
Sbjct: 70  PAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAA 129

Query: 147 AKIMMKKKKGR-IINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIA 205
             ++     G  II ++SV G +G  G+  Y+A+K  V+GL K++A E     I VNAI 
Sbjct: 130 VPLLKASGHGGVIIALSSVAGRLGYPGRTPYAASKWAVVGLVKSLAIELGPLGIRVNAIL 189

Query: 206 PGFIASDMT--------AKLGE---DLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAG 254
           PG +              +LG    ++E++ LEKI LGR  +PE++A    FLA +PAA 
Sbjct: 190 PGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEPEDIAATALFLA-SPAAR 248

Query: 255 YITGQVLTIDGG 266
           YITGQ +++DG 
Sbjct: 249 YITGQAISVDGN 260

Length = 264

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score =  165 bits (421), Expect = 2e-50
 Identities = 93/243 (38%), Positives = 137/243 (56%), Gaps = 6/243 (2%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA++TGAS GIGRA A    + G KV+V  AR   E +++  EI A GG+A+   GDV  
Sbjct: 8   VAIITGASSGIGRAAAKLFAREGAKVVVG-ARRQAELDQLVAEIRAEGGEAVALAGDVRD 66

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTL-LMRMKKSQWQDVIDLNLTGVFLCTQAA 146
           EA  ++++  AV+ +G +DI  NNAG   +   +  M    W++ +  NLT  FL  +  
Sbjct: 67  EAYAKALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQ 126

Query: 147 AKIMMKKKKGRIINIASVVGL-VGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIA 205
              M+ +  G +I  ++ VG   G  G A Y+A+KAG+IGLT+ +A EY ++ I VNA+ 
Sbjct: 127 IPAMLARGGGSLIFTSTFVGHTAGFPGMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALL 186

Query: 206 PGFIASDMTAKLGEDLEKK--ILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTI 263
           PG   + M   +G+  E    +     L R  QPEE+A    FLA + AA ++TG  L +
Sbjct: 187 PGGTDTPMGRAMGDTPEALAFVAGLHALKRMAQPEEIAQAALFLA-SDAASFVTGTALLV 245

Query: 264 DGG 266
           DGG
Sbjct: 246 DGG 248

Length = 254

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score =  164 bits (418), Expect = 4e-50
 Identities = 96/254 (37%), Positives = 145/254 (57%), Gaps = 16/254 (6%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKV-LVNYARSSKEAEEVCKEIEASGGQALTFGGDVS 86
           VA+VTGA +GIG A+A  L + G KV +V+Y  + + A+    ++   GG+A+    DVS
Sbjct: 4   VALVTGAGQGIGFAIAKRLVEDGFKVAIVDY--NEETAQAAADKLSKDGGKAIAVKADVS 61

Query: 87  KEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
               V + ++  VD +G +++++NNAG+   T +  + + Q+  V ++N+ GV    QAA
Sbjct: 62  DRDQVFAAVRQVVDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAA 121

Query: 147 AKIMMKKKK-GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIA 205
            +   K    G+IIN  S  G+VGN   A YS+ K  V GLT+T A++ AS  I VNA A
Sbjct: 122 QEAFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAVRGLTQTAARDLASEGITVNAYA 181

Query: 206 PGFIASDMTAKL--------GEDLE---KKILEKIPLGRYGQPEEVAGLVEFLALNPAAG 254
           PG + + M   +        G+  E   ++  + I LGR  +PE+VA  V FLA  P + 
Sbjct: 182 PGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLGRLSEPEDVANCVSFLA-GPDSD 240

Query: 255 YITGQVLTIDGGMV 268
           YITGQ + +DGGMV
Sbjct: 241 YITGQTIIVDGGMV 254

Length = 256

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score =  163 bits (414), Expect = 1e-49
 Identities = 91/252 (36%), Positives = 137/252 (54%), Gaps = 15/252 (5%)

Query: 24  VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGG 83
           +E  VA+VTGA  GIG A A  L + G +V+V        A+ V  +I    G AL    
Sbjct: 1   LEGKVAIVTGAGAGIGAACAARLAREGARVVVA-DIDGGAAQAVVAQI---AGGALALRV 56

Query: 84  DVSKEADVESMIKTAVDAWGTVDILINNAGITRDT-LLMRMKKSQWQDVIDLNLTGVFLC 142
           DV+ E  V ++ + AV+ +G +D+L+NNAG    T  ++    + W   + +NL G FLC
Sbjct: 57  DVTDEQQVAALFERAVEEFGGLDLLVNNAGAMHLTPAIIDTDLAVWDQTMAINLRGTFLC 116

Query: 143 TQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
            + AA  M+ +  G I+N++S+ G  G+ G   Y A+KA +  LT+T+A E     I  N
Sbjct: 117 CRHAAPRMIARGGGSIVNLSSIAGQSGDPGYGAYGASKAAIRNLTRTLAAELRHAGIRCN 176

Query: 203 AIAPGFIASDMT--------AKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAG 254
           A+APG I + +           LG      ++ ++  GR G+PE+VA  V FL  + A+ 
Sbjct: 177 ALAPGLIDTPLLLAKLAGFEGALGPGGFHLLIHQL-QGRLGRPEDVAAAVVFLLSDDAS- 234

Query: 255 YITGQVLTIDGG 266
           +ITGQVL +DGG
Sbjct: 235 FITGQVLCVDGG 246

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score =  163 bits (414), Expect = 2e-49
 Identities = 85/241 (35%), Positives = 141/241 (58%), Gaps = 4/241 (1%)

Query: 29  AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKE 88
            ++TG+++GIG  +AT L + G ++++N   +++ AE    ++   G +A     +V+ +
Sbjct: 12  ILITGSAQGIGFLLATGLAEYGAEIIIN-DITAERAELAVAKLRQEGIKAHAAPFNVTHK 70

Query: 89  ADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAK 148
            +VE+ I+      G +D+LINNAGI R        + +W DVI +N T VFL +QA A+
Sbjct: 71  QEVEAAIEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVAR 130

Query: 149 IMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGF 208
            M+K++ G+IINI S+   +G      Y+A+K  V  LT+ +  E A  NI VN IAPG+
Sbjct: 131 YMVKRQAGKIINICSMQSELGRDTITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGY 190

Query: 209 IASDMTAKLGEDLE--KKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGG 266
             ++MT  L ED      + ++ P  R+G P+E+ G   FL+ + A+ ++ G +L +DGG
Sbjct: 191 FKTEMTKALVEDEAFTAWLCKRTPAARWGDPQELIGAAVFLS-SKASDFVNGHLLFVDGG 249

Query: 267 M 267
           M
Sbjct: 250 M 250

Length = 254

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score =  163 bits (414), Expect = 2e-49
 Identities = 81/243 (33%), Positives = 129/243 (53%), Gaps = 6/243 (2%)

Query: 29  AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEI--EASGGQALTFGGDVS 86
           A++TGAS+GIG A+A      G  VL+  AR +    +   E+  E    +      DVS
Sbjct: 12  ALITGASKGIGLAIAREFLGLGADVLI-VARDADALAQARDELAEEFPEREVHGLAADVS 70

Query: 87  KEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
            + D  +++    D W  + IL+NNAG       +   + +W+ + + NL   F  ++ A
Sbjct: 71  DDEDRRAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYA 130

Query: 147 AKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
             ++ +     I+NI SV GL      A Y   KA ++ +T+ +A E+A   I VNA+AP
Sbjct: 131 HPLLKQHASSAIVNIGSVSGLTHVRSGAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAP 190

Query: 207 GFIASDMTAKLGEDLEK--KILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTID 264
            +I + +T+    D +   +++E+ P+ R G+PEEVA  V FL + PAA YITGQ + +D
Sbjct: 191 WYIRTPLTSGPLSDPDYYEQVIERTPMRRVGEPEEVAAAVAFLCM-PAASYITGQCIAVD 249

Query: 265 GGM 267
           GG 
Sbjct: 250 GGF 252

Length = 257

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score =  162 bits (412), Expect = 3e-49
 Identities = 89/245 (36%), Positives = 135/245 (55%), Gaps = 9/245 (3%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA+VTGA  GIGRA A    + G +V+V   R ++ AE V   I A GG+A    GDV  
Sbjct: 7   VAIVTGAGSGIGRATAKLFAREGARVVV-ADRDAEAAERVAAAIAA-GGRAFARQGDVGS 64

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
              VE+++      WG +D+L+NNAG      ++   ++ W  V+ +N+ GVFL  + A 
Sbjct: 65  AEAVEALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAI 124

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
            IM ++  G I+N AS + L G  G+A Y A+K  +  LT+ +A ++A+  I VNA+APG
Sbjct: 125 PIMQRQGGGSIVNTASQLALAGGRGRAAYVASKGAIASLTRAMALDHATDGIRVNAVAPG 184

Query: 208 FIASDMTAKL------GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL 261
            I +    ++       E L + +  + P+ R+G  EEVA    FLA +  + + TG  L
Sbjct: 185 TIDTPYFRRIFARHADPEALREALRARHPMNRFGTAEEVAQAALFLASD-ESSFATGTTL 243

Query: 262 TIDGG 266
            +DGG
Sbjct: 244 VVDGG 248

Length = 252

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score =  162 bits (412), Expect = 6e-49
 Identities = 94/254 (37%), Positives = 143/254 (56%), Gaps = 17/254 (6%)

Query: 24  VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGG 83
           +E  VAV+TGAS GIG+A A +L + G  VL      ++   E   +I+++GG+A  +  
Sbjct: 4   LENKVAVITGASTGIGQASAIALAQEGAYVLA--VDIAEAVSETVDKIKSNGGKAKAYHV 61

Query: 84  DVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKK---SQWQDVIDLNLTGVF 140
           D+S E  V+       + +G VD+L NNAG+  D    R+ +     +  ++ +++ G F
Sbjct: 62  DISDEQQVKDFASEIKEQFGRVDVLFNNAGV--DNAAGRIHEYPVDVFDKIMAVDMRGTF 119

Query: 141 LCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNIN 200
           L T+    +MM++  G IIN +S  G   ++ ++ Y+AAK  VI  TK++A EY    I 
Sbjct: 120 LMTKMLLPLMMEQG-GSIINTSSFSGQAADLYRSGYNAAKGAVINFTKSIAIEYGRDGIR 178

Query: 201 VNAIAPGFIASDMTAKLG---EDLEKKILEK-----IPLGRYGQPEEVAGLVEFLALNPA 252
            NAIAPG I + +  KL    ED   K   +      PLGR G+PEEVA LV FLA + +
Sbjct: 179 ANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLGKPEEVAKLVVFLASDDS 238

Query: 253 AGYITGQVLTIDGG 266
           + +ITG+ + IDGG
Sbjct: 239 S-FITGETIRIDGG 251

Length = 272

>gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional

 Score =  161 bits (409), Expect = 7e-49
 Identities = 88/242 (36%), Positives = 140/242 (57%), Gaps = 1/242 (0%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           +A VTG   GIG ++   L K G KV+     +S    +  ++ +A G   +   G+V  
Sbjct: 5   IAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGD 64

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
               ++         G +D+L+NNAGITRD +  +M +  W  VID NLT +F  T+   
Sbjct: 65  WDSTKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVI 124

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
             M+++  GRIINI+SV G  G  GQ NYS AKAG+ G T ++A+E A++ + VN ++PG
Sbjct: 125 DGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPG 184

Query: 208 FIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM 267
           +I +DM   +  D+ +KI+  IP+ R G P+E+  +V +LA +  +G+ TG   +++GG+
Sbjct: 185 YIGTDMVKAIRPDVLEKIVATIPVRRLGSPDEIGSIVAWLA-SEESGFSTGADFSLNGGL 243

Query: 268 VM 269
            M
Sbjct: 244 HM 245

Length = 246

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score =  160 bits (407), Expect = 1e-48
 Identities = 88/248 (35%), Positives = 136/248 (54%), Gaps = 8/248 (3%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
            A+VTG   GIG A      + G KV V +  + + AE+V  +I A GG A  F  D++ 
Sbjct: 5   TAIVTGGGGGIGGATCRRFAEEGAKVAV-FDLNREAAEKVAADIRAKGGNAQAFACDITD 63

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
              V++ +  A  A G VD+L+NNAG  +     + +   W+ +I +NLTG      A  
Sbjct: 64  RDSVDTAVAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVL 123

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
             M+++  GRI+NIAS    VG+ G+A Y+A K G++  +KT+A+E+A   I VN + PG
Sbjct: 124 PGMVERGAGRIVNIASDAARVGSSGEAVYAACKGGLVAFSKTMAREHARHGITVNVVCPG 183

Query: 208 FIASDMTAKL------GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL 261
              + +   +       E L +     IPLGR GQP+++ G + F + +  A +ITGQVL
Sbjct: 184 PTDTALLDDICGGAENPEKLREAFTRAIPLGRLGQPDDLPGAILFFS-SDDASFITGQVL 242

Query: 262 TIDGGMVM 269
           ++ GG+ M
Sbjct: 243 SVSGGLTM 250

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score =  161 bits (408), Expect = 2e-48
 Identities = 89/252 (35%), Positives = 134/252 (53%), Gaps = 12/252 (4%)

Query: 24  VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGG 83
           +    A++TGA +GIG  +A    + G  +++     S E E++  E+   G +      
Sbjct: 4   LTGKTALITGALQGIGEGIARVFARHGANLIL--LDISPEIEKLADELCGRGHRCTAVVA 61

Query: 84  DVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCT 143
           DV   A V + IK A +  G +DIL+NNAG+ R    + M        ID+N+ GV+  T
Sbjct: 62  DVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVT 121

Query: 144 QAAAKIMMKKKKGRIINIASVVG-LVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
           +A    M+ +K GRI+ ++SV G +V + G+  Y+  KA ++GLTK++A EYA   I VN
Sbjct: 122 KAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYAQSGIRVN 181

Query: 203 AIAPGFIASDMTAKLG-----EDLEKKILE---KIPLGRYGQPEEVAGLVEFLALNPAAG 254
           AI PG++ + M   +      ED E  + E    IPL R   P EV  L  FLA + ++ 
Sbjct: 182 AICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPLEVGELAAFLASDESS- 240

Query: 255 YITGQVLTIDGG 266
           Y+TG    IDGG
Sbjct: 241 YLTGTQNVIDGG 252

Length = 263

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score =  160 bits (406), Expect = 3e-48
 Identities = 91/245 (37%), Positives = 137/245 (55%), Gaps = 11/245 (4%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA+VTG+SRGIG+A+A  L + G  + VNYARS K AEE  +EIEA G +AL    +V  
Sbjct: 6   VALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGD 65

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
              ++ M     + +G +D+ +NNA        M +++S W   +++N   +  C Q AA
Sbjct: 66  VEKIKEMFAQIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAA 125

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQ-ANYSA---AKAGVIGLTKTVAKEYASRNINVNA 203
           K+M K   G+II+++S    +G+I    NY+    +KA +  LT+ +A E A + I VNA
Sbjct: 126 KLMEKVGGGKIISLSS----LGSIRYLENYTTVGVSKAALEALTRYLAVELAPKGIAVNA 181

Query: 204 IAPGFIASDMTAKLG--EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL 261
           ++ G + +D        E+L +    K P GR  +PE+VA  V FL   P A  I GQ +
Sbjct: 182 VSGGAVDTDALKHFPNREELLEDARAKTPAGRMVEPEDVANAVLFLCS-PEADMIRGQTI 240

Query: 262 TIDGG 266
            +DGG
Sbjct: 241 IVDGG 245

Length = 250

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score =  159 bits (403), Expect = 7e-48
 Identities = 91/256 (35%), Positives = 138/256 (53%), Gaps = 19/256 (7%)

Query: 23  NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFG 82
           ++   +A+VTGASRGIG A+A  L + G  V+V+ +R     + V   I A+GG+A    
Sbjct: 5   DLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVS-SRKLDGCQAVADAIVAAGGKAEALA 63

Query: 83  GDVSKEADVESMIKTAVDAWGTVDILINNA------GITRDTLLMRMKKSQWQDVIDLNL 136
             + +   ++++     +  G +DIL+NNA      G   DT L       +Q  +D+N+
Sbjct: 64  CHIGEMEQIDALFAHIRERHGRLDILVNNAAANPYFGHILDTDL-----GAFQKTVDVNI 118

Query: 137 TGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYAS 196
            G F  +  A K+M ++  G I+N+ASV G+     Q  YS  KA VI +TK  AKE A 
Sbjct: 119 RGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSITKAAVISMTKAFAKECAP 178

Query: 197 RNINVNAIAPGF----IASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPA 252
             I VNA+ PG      AS +     + + K+ L  IPL R+ +P E+AG V +LA + A
Sbjct: 179 FGIRVNALLPGLTDTKFASALFKN--DAILKQALAHIPLRRHAEPSEMAGAVLYLASD-A 235

Query: 253 AGYITGQVLTIDGGMV 268
           + Y TG+ L +DGG +
Sbjct: 236 SSYTTGECLNVDGGYL 251

Length = 252

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score =  158 bits (402), Expect = 8e-48
 Identities = 94/251 (37%), Positives = 144/251 (57%), Gaps = 10/251 (3%)

Query: 23  NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFG 82
           +V   + +VTG SRGIGR +A    +AG +V+++ AR ++   +  +E+ A G + +   
Sbjct: 3   SVAGKIVLVTGGSRGIGRMIAQGFLEAGARVIIS-ARKAEACADAAEELSAYG-ECIAIP 60

Query: 83  GDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLC 142
            D+S E  +E+++    +    +D+L+NNAG T    L    +S W  V+D+N+  VF  
Sbjct: 61  ADLSSEEGIEALVARVAERSDRLDVLVNNAGATWGAPLEAFPESGWDKVMDINVKSVFFL 120

Query: 143 TQAAAKIMMKKKK----GRIINIASVVGLVGNIGQA-NYSAAKAGVIGLTKTVAKEYASR 197
           TQA   ++          R+INI S+ G+V +  +  +Y A+KA V  LT+ +AKE A  
Sbjct: 121 TQALLPLLRAAATAENPARVINIGSIAGIVVSGLENYSYGASKAAVHQLTRKLAKELAGE 180

Query: 198 NINVNAIAPGFIASDMTAKLGEDLEKK--ILEKIPLGRYGQPEEVAGLVEFLALNPAAGY 255
           +I VNAIAPG   S MTA L  D        + IPLGR+G+PE++AGL   LA + A  Y
Sbjct: 181 HITVNAIAPGRFPSKMTAFLLNDPAALEAEEKSIPLGRWGRPEDMAGLAIMLA-SRAGAY 239

Query: 256 ITGQVLTIDGG 266
           +TG V+ +DGG
Sbjct: 240 LTGAVIPVDGG 250

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score =  158 bits (402), Expect = 1e-47
 Identities = 82/260 (31%), Positives = 132/260 (50%), Gaps = 15/260 (5%)

Query: 23  NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFG 82
           N+    AVVTGA+ GIG+ +A  L +AG  V +    +   A  V  EI  +GG+A+   
Sbjct: 4   NLNGKTAVVTGAASGIGKEIALELARAGAAVAIA-DLNQDGANAVADEINKAGGKAIGVA 62

Query: 83  GDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLC 142
            DV+ E  V + I    + +G+VDIL++NAGI     +     + W+ +  +++ G FL 
Sbjct: 63  MDVTNEDAVNAGIDKVAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLT 122

Query: 143 TQAAAKIMMKKKK-GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINV 201
           T+AA K M K  + G +I + SV     +  ++ Y  AK G++GL + +AKE A  N+  
Sbjct: 123 TKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGAKHNVRS 182

Query: 202 NAIAPGFIASDMTAKLGEDLEKK------------ILEKIPLGRYGQPEEVAGLVEFLAL 249
           + + PGF+ + +  K   +  K+            +L K   G +   E+VA  V FL+ 
Sbjct: 183 HVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQTVLFLSS 242

Query: 250 NPAAGYITGQVLTIDGGMVM 269
            P+A  +TGQ   +  G  M
Sbjct: 243 FPSAA-LTGQSFVVSHGWFM 261

Length = 262

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  157 bits (400), Expect = 1e-47
 Identities = 81/242 (33%), Positives = 120/242 (49%), Gaps = 20/242 (8%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
             ++TGA+ GIG A A +    G +V   Y    ++  ++                    
Sbjct: 7   TVLITGAASGIGLAQARAFLAQGAQV---YGVDKQDKPDLSGNFHF-------------L 50

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRD-TLLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
           + D+   ++   D   +VDIL N AGI  D   L+     +WQ + D NLT  FL T+A 
Sbjct: 51  QLDLSDDLEPLFDWVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAY 110

Query: 147 AKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
              M+++K G IIN+ S+   V   G A Y+A+K  + G TK +A +YA   I V  IAP
Sbjct: 111 LPQMLERKSGIIINMCSIASFVAGGGGAAYTASKHALAGFTKQLALDYAKDGIQVFGIAP 170

Query: 207 GFIASDMTAKLGED--LEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTID 264
           G + + MTA   E   L   +  + P+ R+ +PEEVA L  FLA +  A Y+ G ++ ID
Sbjct: 171 GAVKTPMTAADFEPGGLADWVARETPIKRWAEPEEVAELTLFLA-SGKADYMQGTIVPID 229

Query: 265 GG 266
           GG
Sbjct: 230 GG 231

Length = 235

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score =  165 bits (418), Expect = 2e-47
 Identities = 90/251 (35%), Positives = 144/251 (57%), Gaps = 11/251 (4%)

Query: 22  QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTF 81
              ++ V +VTGA+ GIGRA      +AG +V+V    + +  E   +  ++ G      
Sbjct: 1   SKAQSRVVLVTGAAGGIGRAACQRFARAGDQVVV----ADRNVERARERADSLGPDHHAL 56

Query: 82  GGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTL--LMRMKKSQWQDVIDLNLTGV 139
             DVS EA +    +     +G +D+L+NNAG+T  T+   +     ++  +  +NLTG 
Sbjct: 57  AMDVSDEAQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGA 116

Query: 140 FLCTQAAAKIMMKKKKGR-IINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRN 198
           +L  + A ++M+++  G  I+N+AS  GLV    +  YSA+KA VI LT+++A E+A++ 
Sbjct: 117 YLVAREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKAAVISLTRSLACEWAAKG 176

Query: 199 INVNAIAPGFIASDMTAKL---GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGY 255
           I VNA+ PG++ + M A+L   G+     +  +IPLGR G+PEE+A  V FLA +  A Y
Sbjct: 177 IRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRIPLGRLGRPEEIAEAVFFLA-SDQASY 235

Query: 256 ITGQVLTIDGG 266
           ITG  L +DGG
Sbjct: 236 ITGSTLVVDGG 246

Length = 520

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  158 bits (401), Expect = 2e-47
 Identities = 89/250 (35%), Positives = 128/250 (51%), Gaps = 13/250 (5%)

Query: 25  EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGD 84
           +  VA++TG +RGIGRA+A +  + G KV V Y  +  EA    KE+   G    T   D
Sbjct: 6   KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEA----KELREKGV--FTIKCD 59

Query: 85  VSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQ 144
           V     V+   +     +G VD+L+NNAGI          + ++  +I +NL G    T 
Sbjct: 60  VGNRDQVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTY 119

Query: 145 AAAKIMMKKKKGRIINIASVVGL-VGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNA 203
               ++   K G I+NIAS  G+     G   Y+  KAG+I LT+ +A E     I VNA
Sbjct: 120 EFLPLLKLSKNGAIVNIASNAGIGTAAEGTTFYAITKAGIIILTRRLAFELGKYGIRVNA 179

Query: 204 IAPGFIASDMTAKLGEDLEKKILE-----KIPLGRYGQPEEVAGLVEFLALNPAAGYITG 258
           +APG++ +DMT       E + L      K  L   G+PE++A +V FLA + A  YITG
Sbjct: 180 VAPGWVETDMTLSGKSQEEAEKLRELFRNKTVLKTTGKPEDIANIVLFLASDDAR-YITG 238

Query: 259 QVLTIDGGMV 268
           QV+  DGG +
Sbjct: 239 QVIVADGGRI 248

Length = 255

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score =  157 bits (400), Expect = 3e-47
 Identities = 87/255 (34%), Positives = 128/255 (50%), Gaps = 21/255 (8%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VAVVTG + G+G A    L   G KV++    +S             G        DV+ 
Sbjct: 4   VAVVTGGASGLGLATVERLLAQGAKVVILDLPNSPGETV-----AKLGDNCRFVPVDVTS 58

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQ------WQDVIDLNLTGVFL 141
           E DV++ +  A   +G +DI++N AGI         K  Q      +Q VI++NL G F 
Sbjct: 59  EKDVKAALALAKAKFGRLDIVVNCAGIAVAAKTYNKKGQQPHSLELFQRVINVNLIGTFN 118

Query: 142 CTQAAAKIMMK------KKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYA 195
             + AA  M K       ++G IIN ASV    G IGQA YSA+K G++G+T  +A++ A
Sbjct: 119 VIRLAAGAMGKNEPDQGGERGVIINTASVAAFEGQIGQAAYSASKGGIVGMTLPIARDLA 178

Query: 196 SRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIP-LGRYGQPEEVAGLVEFLALNPAAG 254
            + I V  IAPG   + + A L E +   + +++P   R G P E A LV+ +  NP   
Sbjct: 179 PQGIRVVTIAPGLFDTPLLAGLPEKVRDFLAKQVPFPSRLGDPAEYAHLVQHIIENP--- 235

Query: 255 YITGQVLTIDGGMVM 269
           Y+ G+V+ +DG + M
Sbjct: 236 YLNGEVIRLDGAIRM 250

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score =  158 bits (401), Expect = 3e-47
 Identities = 82/245 (33%), Positives = 132/245 (53%), Gaps = 8/245 (3%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKE-AEEVCKEIEASGGQALTFGGDVS 86
            A++TG   GIGRAVA +  + G  V +NY    ++ AEE  K IE  G + L   GD+ 
Sbjct: 28  KALITGGDSGIGRAVAIAFAREGADVAINYLPEEEDDAEETKKLIEEEGRKCLLIPGDLG 87

Query: 87  KEADVESMIKTAVDAWGTVDILINNAG--ITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQ 144
            E+    ++K  V  +G +DIL+NNA     ++++   +   Q +     N+  +F  T+
Sbjct: 88  DESFCRDLVKEVVKEFGKLDILVNNAAYQHPQESIE-DITTEQLEKTFRTNIFSMFYLTK 146

Query: 145 AAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAI 204
           AA   +  KK   IIN  SV    G+    +Y+A K  ++  T+ ++ + A + I VNA+
Sbjct: 147 AALPHL--KKGSSIINTTSVTAYKGSPHLLDYAATKGAIVAFTRGLSLQLAEKGIRVNAV 204

Query: 205 APGFIASDM-TAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTI 263
           APG I + +  +   E+   +   ++P+GR GQP EVA    FLA +  + Y+TGQVL +
Sbjct: 205 APGPIWTPLIPSSFPEEKVSEFGSQVPMGRAGQPAEVAPAYVFLA-SQDSSYVTGQVLHV 263

Query: 264 DGGMV 268
           +GG +
Sbjct: 264 NGGEI 268

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score =  156 bits (396), Expect = 8e-47
 Identities = 79/248 (31%), Positives = 128/248 (51%), Gaps = 12/248 (4%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGG---QALTFGGD 84
           VA++TG+S GIG   A    + G ++ +   R ++  EE  +    +G    + L    D
Sbjct: 5   VAIITGSSSGIGAGTAILFARLGARLALT-GRDAERLEETRQSCLQAGVSEKKILLVVAD 63

Query: 85  VSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQ 144
           +++E   + +I T +  +G +DIL+NNAGI            ++  V++LNL  V   T+
Sbjct: 64  LTEEEGQDRIISTTLAKFGRLDILVNNAGILAKGGGEDQDIEEYDKVMNLNLRAVIYLTK 123

Query: 145 AAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAI 204
            A    + K KG I+N++SV G     G   Y  +KA +   T+  A E A + + VN++
Sbjct: 124 LA-VPHLIKTKGEIVNVSSVAGGRSFPGVLYYCISKAALDQFTRCTALELAPKGVRVNSV 182

Query: 205 APGFIASDMTAKLGEDLE------KKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITG 258
           +PG I +    ++G   E       +  E  PLGR G  +EVA  + FLA + A+ +ITG
Sbjct: 183 SPGVIVTGFHRRMGMPEEQYIKFLSRAKETHPLGRPGTVDEVAEAIAFLA-SDASSFITG 241

Query: 259 QVLTIDGG 266
           Q+L +DGG
Sbjct: 242 QLLPVDGG 249

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score =  156 bits (396), Expect = 1e-46
 Identities = 87/266 (32%), Positives = 140/266 (52%), Gaps = 22/266 (8%)

Query: 24  VEAPVAVVTGASRGIGRAVATSLGKAG--------CKVLVNY----ARSSKEAEEVCKEI 71
           +E  VA +TGA+RG GRA A  L   G        C  L +Y      + ++ +E  + +
Sbjct: 1   LEGKVAFITGAARGQGRAHAVRLAAEGADIIAIDLCAPLSDYPTYPLATREDLDETARLV 60

Query: 72  EASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDV 131
           EA G + L    DV   A+V ++++  V+ +G +D+++ NAG+        + + QW  V
Sbjct: 61  EALGRKVLARKADVRDLAEVRAVVEDGVEQFGRLDVVVANAGVLSYGRSWELSEEQWDTV 120

Query: 132 IDLNLTGVFLCTQAAAKIMMKKKK-GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTV 190
           +D+NLTGV+   +A    M+++   G II  +SV GL    G A+Y+AAK G++GLTKT+
Sbjct: 121 LDINLTGVWRTCKAVVPHMIERGNGGSIIITSSVAGLKALPGLAHYAAAKHGLVGLTKTL 180

Query: 191 AKEYASRNINVNAIAPGFIASDMTAKLG--------EDLEKKILEKIPLGRYGQPEEVAG 242
           A E A   I VN+I P  + + M A            +  +  +  +P+  +  PE+VA 
Sbjct: 181 ANELAEYGIRVNSIHPYSVDTPMIAPEAMREAFLKYPEAARAFMPALPVSGFVPPEDVAD 240

Query: 243 LVEFLALNPAAGYITGQVLTIDGGMV 268
            V +LA +  + YITG  L +D G +
Sbjct: 241 AVLWLA-SDESRYITGHQLPVDAGAL 265

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score =  155 bits (394), Expect = 2e-46
 Identities = 83/243 (34%), Positives = 131/243 (53%), Gaps = 6/243 (2%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
            A++TGA  GIG+ +A +   AG  V+V+   +   A  V  EI+  GGQA     D++ 
Sbjct: 13  CAIITGAGAGIGKEIAITFATAGASVVVSDINA-DAANHVVDEIQQLGGQAFACRCDITS 71

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLL-MRMKKSQWQDVIDLNLTGVFLCTQAA 146
           E ++ ++   A+   G VDIL+NNAG        M M   +     +LN+   F  +Q  
Sbjct: 72  EQELSALADFALSKLGKVDILVNNAGGGGPKPFDMPMADFRR--AYELNVFSFFHLSQLV 129

Query: 147 AKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
           A  M K   G I+ I S+     NI   +Y+++KA    L + +A +   +NI VN IAP
Sbjct: 130 APEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAP 189

Query: 207 GFIASDMTAK-LGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDG 265
           G I +D     +  ++E+K+L+  P+ R GQP+++A    FL  +PAA +++GQ+LT+ G
Sbjct: 190 GAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLC-SPAASWVSGQILTVSG 248

Query: 266 GMV 268
           G V
Sbjct: 249 GGV 251

Length = 255

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score =  154 bits (391), Expect = 4e-46
 Identities = 100/241 (41%), Positives = 148/241 (61%), Gaps = 6/241 (2%)

Query: 29  AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKE 88
           A++TGAS GIG+ VA +  +AG +V +  AR     E++  EI  SGG+ +    DVS+ 
Sbjct: 12  ALITGASTGIGKRVALAYVEAGAQVAIA-ARHLDALEKLADEIGTSGGKVVPVCCDVSQH 70

Query: 89  ADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAK 148
             V SM+       G +DI + NAGI   T ++ M   ++Q + + N+TGVFL  QAAAK
Sbjct: 71  QQVTSMLDQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAK 130

Query: 149 IMMKK-KKGRIINIASVVGLVGNIGQ--ANYSAAKAGVIGLTKTVAKEYASRNINVNAIA 205
            M+K+ + G IIN AS+ G + N+ Q  ++Y A+KA VI LTK +A E A   I VN+++
Sbjct: 131 AMVKQGQGGVIINTASMSGHIINVPQQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVS 190

Query: 206 PGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDG 265
           PG+I +++      + +     KIPLGR G+PEE+AGL  +LA + A+ Y+TG  + IDG
Sbjct: 191 PGYILTELVEPY-TEYQPLWEPKIPLGRLGRPEELAGLYLYLA-SEASSYMTGSDIVIDG 248

Query: 266 G 266
           G
Sbjct: 249 G 249

Length = 253

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score =  154 bits (390), Expect = 5e-46
 Identities = 91/243 (37%), Positives = 143/243 (58%), Gaps = 4/243 (1%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA+VTG + GIG+A+A +L KAG  V++   +S   AE V   I+ +GGQA+    +V+ 
Sbjct: 1   VAIVTGGAAGIGKAIAGTLAKAGASVVIADLKSEG-AEAVAAAIQQAGGQAIGLECNVTS 59

Query: 88  EADVESMIKTAVDAWGTVDILINNAGIT-RDTLLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
           E D+E+++K  V  +G + IL+NNAG        M M +  ++    LNL   F  +Q  
Sbjct: 60  EQDLEAVVKATVSQFGGITILVNNAGGGGPKPFDMPMTEEDFEWAFKLNLFSAFRLSQLC 119

Query: 147 AKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
           A  M K   G I+NI+S+     N+  A Y ++KA V  +T+ +A +   + I VNA+AP
Sbjct: 120 APHMQKAGGGAILNISSMSSENKNVRIAAYGSSKAAVNHMTRNLAFDLGPKGIRVNAVAP 179

Query: 207 GFIASDMTAKLGED-LEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDG 265
           G + +D  A +    +E+ +L+  PLGR G+PE++A    FL  +PA+ +++GQVLT+ G
Sbjct: 180 GAVKTDALASVLTPEIERAMLKHTPLGRLGEPEDIANAALFLC-SPASAWVSGQVLTVSG 238

Query: 266 GMV 268
           G V
Sbjct: 239 GGV 241

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score =  154 bits (391), Expect = 6e-46
 Identities = 87/271 (32%), Positives = 126/271 (46%), Gaps = 41/271 (15%)

Query: 23  NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQA---L 79
           N++  + +VTG S GIG A+   L   G  V             V  +I    GQ     
Sbjct: 6   NLQGKIIIVTGGSSGIGLAIVKELLANGANV-------------VNADIHGGDGQHENYQ 52

Query: 80  TFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQ---------WQD 130
               DVS   +V   +   ++ +G +D L+NNAGI    LL+  K            +  
Sbjct: 53  FVPTDVSSAEEVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDK 112

Query: 131 VIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTV 190
           + ++N  GVFL +QA A+ M+K+  G I+N++S  GL G+ GQ+ Y+A KA +   T++ 
Sbjct: 113 MFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEGQSCYAATKAALNSFTRSW 172

Query: 191 AKEYASRNINVNAIAPGFI------ASDMTAKLG-------EDLEKKILEK--IPLGRYG 235
           AKE    NI V  +APG +        +    L        E L     +   IPLGR G
Sbjct: 173 AKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIPLGRSG 232

Query: 236 QPEEVAGLVEFLALNPAAGYITGQVLTIDGG 266
           +  EVA LV +L  + A+ YITG    I GG
Sbjct: 233 KLSEVADLVCYLLSDRAS-YITGVTTNIAGG 262

Length = 266

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score =  153 bits (389), Expect = 7e-46
 Identities = 86/250 (34%), Positives = 145/250 (58%), Gaps = 17/250 (6%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEA-EEVCKEIEASGGQALTF-GGDV 85
           VA++TG + GIG A A    K G +V++  A    +A + V  E+   G   ++F   DV
Sbjct: 6   VAIITGGASGIGEATARLFAKHGARVVI--ADIDDDAGQAVAAEL---GDPDISFVHCDV 60

Query: 86  SKEADVESMIKTAVDAWGTVDILINNAGI--TRDTLLMRMKKSQWQDVIDLNLTGVFLCT 143
           + EADV + + TAV  +G +DI+ NNAG+       ++     +++ V+D+N+ G FL T
Sbjct: 61  TVEADVRAAVDTAVARFGRLDIMFNNAGVLGAPCYSILETSLEEFERVLDVNVYGAFLGT 120

Query: 144 QAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNA 203
           + AA++M+  KKG I+++ASV G+VG +G   Y+A+K  V+GLT++ A E     I VN 
Sbjct: 121 KHAARVMIPAKKGSIVSVASVAGVVGGLGPHAYTASKHAVLGLTRSAATELGEHGIRVNC 180

Query: 204 IAPGFIASDMTAKLGEDLEKKILEKI------PLGRYGQPEEVAGLVEFLALNPAAGYIT 257
           ++P  +A+ +    G  +E + +E+         G   +PE++A  V +LA + +  Y++
Sbjct: 181 VSPYGVATPL-LTAGFGVEDEAIEEAVRGAANLKGTALRPEDIAAAVLYLASDDSR-YVS 238

Query: 258 GQVLTIDGGM 267
           GQ L +DGG+
Sbjct: 239 GQNLVVDGGL 248

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score =  153 bits (388), Expect = 2e-45
 Identities = 92/260 (35%), Positives = 145/260 (55%), Gaps = 27/260 (10%)

Query: 21  AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALT 80
           +Q +   VAV+TG   GIG A A  L   G  V             V  +I+   G+A  
Sbjct: 2   SQRLAGRVAVITGGGSGIGLATARRLAAEGATV-------------VVGDIDPEAGKAAA 48

Query: 81  --FGG-----DVSKEADVESMIKTAVDAWGTVDILINNAGIT--RDTLLMRMKKSQWQDV 131
              GG     DV+ E  V ++  TA + +G+VDI  NNAGI+   D  ++      WQ V
Sbjct: 49  DEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRV 108

Query: 132 IDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGN-IGQANYSAAKAGVIGLTKTV 190
            D+NLT V+LC +AA   M+++ KG IIN AS V ++G+   Q +Y+A+K GV+ +++ +
Sbjct: 109 QDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATSQISYTASKGGVLAMSREL 168

Query: 191 AKEYASRNINVNAIAPGFIASDMTAKL-GEDLEK--KILEKIPLGRYGQPEEVAGLVEFL 247
             ++A + I VNA+ PG + + +  +L  +D E+  + L  +P+GR+ +PEE+A  V FL
Sbjct: 169 GVQFARQGIRVNALCPGPVNTPLLQELFAKDPERAARRLVHVPMGRFAEPEEIAAAVAFL 228

Query: 248 ALNPAAGYITGQVLTIDGGM 267
           A + A+ +IT     +DGG+
Sbjct: 229 ASDDAS-FITASTFLVDGGI 247

Length = 255

>gnl|CDD|187583 cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehydrogenase (SDH), classical (c) SDRs

 Score =  153 bits (387), Expect = 2e-45
 Identities = 88/256 (34%), Positives = 136/256 (53%), Gaps = 16/256 (6%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS-GGQALTFGGDVS 86
           VAVV G  + +G  +   L +AG  V V    S   AE+V  EI A  G +A  FG D +
Sbjct: 4   VAVVIGGGQTLGEFLCHGLAEAGYDVAVADINSEN-AEKVADEINAEYGEKAYGFGADAT 62

Query: 87  KEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
            E  V ++ K   + +  VD+L+ +AGI +   +   +   +   + +NL G FLC +  
Sbjct: 63  NEQSVIALSKGVDEIFKRVDLLVYSAGIAKSAKITDFELGDFDRSLQVNLVGYFLCAREF 122

Query: 147 AKIMMKKK-KGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIA 205
           +K+M++   +GRII I S  G VG+   + YSAAK G +GLT+++A + A   I VN++ 
Sbjct: 123 SKLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLAEHGITVNSLM 182

Query: 206 PG-FIASDM--------TAKLG---EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAA 253
            G  + S M          KLG    ++E+  ++K+PL R    ++V  ++ F A +P A
Sbjct: 183 LGNLLKSPMFQSLLPQYAKKLGIKESEVEQYYIDKVPLKRGCDYQDVLNMLLFYA-SPKA 241

Query: 254 GYITGQVLTIDGGMVM 269
            Y TGQ + I GG VM
Sbjct: 242 SYCTGQSINITGGQVM 257

Sorbitol 6-phosphate dehydrogenase (SDH, aka glucitol 6-phosphate dehydrogenase) catalyzes the NAD-dependent interconversion of D-fructose 6-phosphate to D-sorbitol 6-phosphate. SDH is a member of the classical SDRs, with the characteristic catalytic tetrad, but without a complete match to the typical NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score =  153 bits (388), Expect = 2e-45
 Identities = 85/241 (35%), Positives = 137/241 (56%), Gaps = 7/241 (2%)

Query: 28  VAVVTGAS-RGIGRAVATSLGKAGCKVLVN--YARSSKEAEEVCKEIEASGGQALTFGGD 84
           V +VT A+  GIG A A    + G +V+++  + R   E  +     E   G+      D
Sbjct: 19  VVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAA-ELGLGRVEAVVCD 77

Query: 85  VSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQ 144
           V+ EA V+++I  AV+  G +D+L+NNAG+   T ++ M   +W  V+D+ LTG F  T+
Sbjct: 78  VTSEAQVDALIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATR 137

Query: 145 AAAKIMM-KKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNA 203
           AA + M  +   G I+N ASV+G     GQA+Y+AAKAGV+ LT+  A E A   + +NA
Sbjct: 138 AALRYMRARGHGGVIVNNASVLGWRAQHGQAHYAAAKAGVMALTRCSALEAAEYGVRINA 197

Query: 204 IAPGFIASDMTAKL-GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLT 262
           +AP        AK+   +L  ++  +   GR  +P EVA ++ FLA + ++ Y+TG+V++
Sbjct: 198 VAPSIAMHPFLAKVTSAELLDELAAREAFGRAAEPWEVANVIAFLASDYSS-YLTGEVVS 256

Query: 263 I 263
           +
Sbjct: 257 V 257

Length = 262

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score =  152 bits (385), Expect = 2e-45
 Identities = 89/245 (36%), Positives = 132/245 (53%), Gaps = 7/245 (2%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           +A+VTG SRGIGRA A  L + G  V VNY ++   A+EV   I  +GG+A     D+S 
Sbjct: 3   IALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISD 62

Query: 88  EADVESMIKTAVDAWGTVDILINNAGIT-RDTLLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
           E  V +M          +  L+NNAGI      +  +   +   V+  N+TG FLC + A
Sbjct: 63  ENQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREA 122

Query: 147 AKIMMKK---KKGRIINIASVVGLVGNIGQ-ANYSAAKAGVIGLTKTVAKEYASRNINVN 202
            K M  K     G I+N++S    +G  G+  +Y+A+K  +  LT  ++ E A++ I VN
Sbjct: 123 VKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASKGAIDTLTTGLSLEVAAQGIRVN 182

Query: 203 AIAPGFIASDMTAKLGEDLE-KKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL 261
            + PGFI ++M A  GE     ++   IP+ R GQPEEVA  + +L L+  A Y+TG  +
Sbjct: 183 CVRPGFIYTEMHASGGEPGRVDRVKSNIPMQRGGQPEEVAQAIVWL-LSDKASYVTGSFI 241

Query: 262 TIDGG 266
            + GG
Sbjct: 242 DLAGG 246

Length = 247

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score =  152 bits (386), Expect = 3e-45
 Identities = 88/257 (34%), Positives = 138/257 (53%), Gaps = 23/257 (8%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLV---NYARSSKEAEEVCKEIEASGGQALTFGGD 84
           VA++TGA+ GIG AVA      G +V++     AR+   A E+       G  A+    D
Sbjct: 8   VALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI-------GPAAIAVSLD 60

Query: 85  VSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQ 144
           V+++  ++ ++  AV+ +G +DIL NNA +     ++ + +  +  +  +N+ G+F   Q
Sbjct: 61  VTRQDSIDRIVAAAVERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQ 120

Query: 145 AAAKIMMKKKKG-RIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNA 203
           A A+ M+++ +G +IIN+AS  G  G    ++Y A KA VI  T++ A       INVNA
Sbjct: 121 AVARHMVEQGRGGKIINMASQAGRRGEALVSHYCATKAAVISYTQSAALALIRHGINVNA 180

Query: 204 IAPGFIASDM----TAKLG--EDL---EKKIL--EKIPLGRYGQPEEVAGLVEFLALNPA 252
           IAPG + + M     A     E+    EKK L  E +PLGR G P+++ G+  FLA +  
Sbjct: 181 IAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTGMALFLA-SAD 239

Query: 253 AGYITGQVLTIDGGMVM 269
           A YI  Q   +DGG  M
Sbjct: 240 ADYIVAQTYNVDGGNWM 256

Length = 257

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score =  151 bits (384), Expect = 4e-45
 Identities = 90/245 (36%), Positives = 135/245 (55%), Gaps = 7/245 (2%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           V ++TGASRGIG A A    + G  V +NY R+   AE V + I   GG+AL    DV+ 
Sbjct: 4   VMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVAD 63

Query: 88  EADVESMIKTAVDAWGTVDILINNAGI-TRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
           EADV  + +      G +D L+NNAGI      L +M  ++   +   N+ G FLC + A
Sbjct: 64  EADVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREA 123

Query: 147 AKIMMKKKKGR---IINIASVVGLVGNIGQ-ANYSAAKAGVIGLTKTVAKEYASRNINVN 202
            K M  +  GR   I+N++S+   +G+ G+  +Y+A+K  +  +T  +AKE A+  I VN
Sbjct: 124 VKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAASKGAIDTMTIGLAKEVAAEGIRVN 183

Query: 203 AIAPGFIASDMTAKLGE-DLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL 261
           A+ PG I +++ A  GE     ++   IP+GR G  EEVA  + +L L+  A Y TG  +
Sbjct: 184 AVRPGVIYTEIHASGGEPGRVDRVKAGIPMGRGGTAEEVARAILWL-LSDEASYTTGTFI 242

Query: 262 TIDGG 266
            + GG
Sbjct: 243 DVSGG 247

Length = 248

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score =  151 bits (382), Expect = 6e-45
 Identities = 88/241 (36%), Positives = 136/241 (56%), Gaps = 18/241 (7%)

Query: 29  AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKE 88
            +VTGA++GIG A++  L   G +V +  ARS+         I+   G+      D++  
Sbjct: 6   VLVTGATKGIGLALSLRLANLGHQV-IGIARSA---------IDDFPGELFAC--DLADI 53

Query: 89  ADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAK 148
               + +   ++    VD ++NN GI     L ++  +  QDV DLN+      TQA  +
Sbjct: 54  EQTAATLA-QINEIHPVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLE 112

Query: 149 IMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGF 208
            M  +++GRI+NI S   + G + + +YSAAK+ ++G T+T A E A   I VNA+APG 
Sbjct: 113 GMKLREQGRIVNICSR-AIFGALDRTSYSAAKSALVGCTRTWALELAEYGITVNAVAPGP 171

Query: 209 IASDM---TAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDG 265
           I +++   T  +G + EK++L  IP+ R G PEEVA  + FL L+  AG+ITGQVL +DG
Sbjct: 172 IETELFRQTRPVGSEEEKRVLASIPMRRLGTPEEVAAAIAFL-LSDDAGFITGQVLGVDG 230

Query: 266 G 266
           G
Sbjct: 231 G 231

Length = 234

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score =  150 bits (381), Expect = 1e-44
 Identities = 95/250 (38%), Positives = 134/250 (53%), Gaps = 13/250 (5%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCK-VLVNYARSS-KEAEEVCKEIEASGGQALTFGGDV 85
           V ++TG   G+G A A  L K G K  LV+      + A+    EI A   + L    DV
Sbjct: 5   VVLITGGGSGLGLATAVRLAKEGAKLSLVDLNEEGLEAAKAALLEI-APDAEVLLIKADV 63

Query: 86  SKEADVESMIKTAVDAWGTVDILINNAGIT-RDTLLMRMKKSQWQDVIDLNLTGVFLCTQ 144
           S EA VE+ +   V+ +G +D   NNAGI  +  L       ++  V+ +NL GVF   +
Sbjct: 64  SDEAQVEAYVDATVEQFGRIDGFFNNAGIEGKQNLTEDFGADEFDKVVSINLRGVFYGLE 123

Query: 145 AAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAI 204
              K+M ++  G I+N ASV G+ G   Q+ Y+AAK GV+GLT+  A EY    I +NAI
Sbjct: 124 KVLKVMREQGSGMIVNTASVGGIRGVGNQSGYAAAKHGVVGLTRNSAVEYGQYGIRINAI 183

Query: 205 APGFIASDMTAKL-----GEDLEKKILEKI---PLGRYGQPEEVAGLVEFLALNPAAGYI 256
           APG I + M          E+ E+   E +   P+ R+G+PEEVA +V FL L+  AGY+
Sbjct: 184 APGAILTPMVEGSLKQLGPENPEEAGEEFVSVNPMKRFGEPEEVAAVVAFL-LSDDAGYV 242

Query: 257 TGQVLTIDGG 266
              V+ IDGG
Sbjct: 243 NAAVVPIDGG 252

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score =  149 bits (379), Expect = 2e-44
 Identities = 80/227 (35%), Positives = 118/227 (51%), Gaps = 14/227 (6%)

Query: 22  QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTF 81
            +++  VA++TG S+GIG A+A +L   G KV +  AR  KE EE   E+  + G  L  
Sbjct: 2   MSLKGKVALITGGSKGIGFAIAEALLAEGYKVAI-TARDQKELEEAAAELN-NKGNVLGL 59

Query: 82  GGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFL 141
             DV  EADV+  +   V A+G +D+LI NAG+     +  +   +W+ VID NLTG F 
Sbjct: 60  AADVRDEADVQRAVDAIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFY 119

Query: 142 CTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINV 201
             +AA    +K+  G IINI+S+ G     G A Y+A+K G++G ++    +     I V
Sbjct: 120 TIKAAVP-ALKRGGGYIINISSLAGTNFFAGGAAYNASKFGLVGFSEAAMLDLRQYGIKV 178

Query: 202 NAIAPGFIASDMTAKL-GEDLEKKILEKIPLGRYGQPEEVAGLVEFL 247
           + I PG +A+        E    KI          QPE++A LV  L
Sbjct: 179 STIMPGSVATHFNGHTPSEKDAWKI----------QPEDIAQLVLDL 215

Length = 237

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score =  150 bits (380), Expect = 2e-44
 Identities = 87/248 (35%), Positives = 133/248 (53%), Gaps = 12/248 (4%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VAVVTGA RG+G A+A +  +AG  VL+  AR+  + +EV ++I A+G +A     D++ 
Sbjct: 12  VAVVTGAGRGLGAAIALAFAEAGADVLIA-ARTESQLDEVAEQIRAAGRRAHVVAADLAH 70

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
                 +   AV+A+G +DI++NN G T    L+        D    N+      T AA 
Sbjct: 71  PEATAGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAV 130

Query: 148 KIMMKKK-KGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
            +M++    G +INI+S +G +   G A Y  AKA +   T+  A +   R I VNAIAP
Sbjct: 131 PLMLEHSGGGSVINISSTMGRLAGRGFAAYGTAKAALAHYTRLAALDLCPR-IRVNAIAP 189

Query: 207 GFIASDMTAKL-----GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL 261
           G I   +T+ L      ++L   + +  PL R G PE++A    +LA +PA  Y+TG+ L
Sbjct: 190 GSI---LTSALEVVAANDELRAPMEKATPLRRLGDPEDIAAAAVYLA-SPAGSYLTGKTL 245

Query: 262 TIDGGMVM 269
            +DGG+  
Sbjct: 246 EVDGGLTF 253

Length = 263

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score =  150 bits (380), Expect = 2e-44
 Identities = 89/251 (35%), Positives = 138/251 (54%), Gaps = 25/251 (9%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA+VTG S+GIG+AV   L + G  V +N+              +           DVS 
Sbjct: 8   VAIVTGGSQGIGKAVVNRLKEEGSNV-INFDIKEPS-YNDVDYFKV----------DVSN 55

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
           +  V   I   +  +G +DIL+NNAGI     +  +++ +W  +I++N+ G+FL ++   
Sbjct: 56  KEQVIKGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTI 115

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
             M+K+ KG IINIASV         A Y  +K  V+GLT+++A +YA   I   A+ PG
Sbjct: 116 PYMLKQDKGVIINIASVQSFAVTRNAAAYVTSKHAVLGLTRSIAVDYAPT-IRCVAVCPG 174

Query: 208 FIAS---DMTAKL--GED---LEKKILE---KIPLGRYGQPEEVAGLVEFLALNPAAGYI 256
            I +   +  A+L  G+D   +E+KI E     P+ R G+PEEVA +V FLA + A+ +I
Sbjct: 175 SIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVGKPEEVAYVVAFLASDLAS-FI 233

Query: 257 TGQVLTIDGGM 267
           TG+ +T+DGG+
Sbjct: 234 TGECVTVDGGL 244

Length = 258

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score =  150 bits (381), Expect = 4e-44
 Identities = 85/245 (34%), Positives = 122/245 (49%), Gaps = 13/245 (5%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA++TG   GIGRAVA    K G  + + Y    ++A E  + +E  G + L   GDVS 
Sbjct: 48  VALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSD 107

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTL-LMRMKKSQWQDVIDLNLTGVFLCTQAA 146
           EA  +  ++  V   G +DIL+NNA        L  +   Q       N+   F  T+AA
Sbjct: 108 EAFCKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAA 167

Query: 147 AKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
              +  K+   IIN  S+ G  GN    +YSA K  +   T+++A+    + I VNA+AP
Sbjct: 168 LPHL--KQGSAIINTGSITGYEGNETLIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAP 225

Query: 207 G-----FIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL 261
           G      I SD      E +  +     P+ R GQPEE+A    FLA +P + YITGQ+L
Sbjct: 226 GPIWTPLIPSD---FDEEKV-SQFGSNTPMQRPGQPEELAPAYVFLA-SPDSSYITGQML 280

Query: 262 TIDGG 266
            ++GG
Sbjct: 281 HVNGG 285

Length = 290

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  148 bits (376), Expect = 6e-44
 Identities = 86/235 (36%), Positives = 137/235 (58%), Gaps = 15/235 (6%)

Query: 21  AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKV-LVNYARSSKEAEEVCKEIEASGGQAL 79
           AQ+++   A++TGA RGIGRAVA +L K G  V L+  AR+ +  + V +E+EA G + +
Sbjct: 2   AQSLQGKNALITGAGRGIGRAVAIALAKEGVNVGLL--ARTEENLKAVAEEVEAYGVKVV 59

Query: 80  TFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGV 139
               DVS   +V + I+   +  G++DILINNAGI++    + +  ++W+ +I +NL GV
Sbjct: 60  IATADVSDYEEVTAAIEQLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGV 119

Query: 140 FLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNI 199
           +  T+A    M++++ G IINI+S  G  G    + YSA+K GV+GLT+++ +E    NI
Sbjct: 120 YYATRAVLPSMIERQSGDIINISSTAGQKGAAVTSAYSASKFGVLGLTESLMQEVRKHNI 179

Query: 200 NVNAIAPGFIASDMT--AKLGEDLEKKILEKIPLGRYGQPEEVAGL-VEFLALNP 251
            V A+ P  +A+DM     L +    K++         QPE++A   V  L LN 
Sbjct: 180 RVTALTPSTVATDMAVDLGLTDGNPDKVM---------QPEDLAEFIVAQLKLNK 225

Length = 239

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score =  148 bits (376), Expect = 9e-44
 Identities = 87/249 (34%), Positives = 129/249 (51%), Gaps = 14/249 (5%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS--GGQALTFGGDV 85
           VA+VTGA++GIG A+A +  + G  V +     +  AE     I     G + L    DV
Sbjct: 9   VALVTGAAQGIGAAIARAFAREGAAVALA-DLDAALAERAAAAIARDVAGARVLAVPADV 67

Query: 86  SKEADVESMIKTAVDAWGTVDILINNAGIT--RDTLLMRMKKSQWQDVIDLNLTGVFLCT 143
           +  A V + +  A +A+G +D+L+NNAGI    D L   M    W+    ++L G +   
Sbjct: 68  TDAASVAAAVAAAEEAFGPLDVLVNNAGINVFADPL--AMTDEDWRRCFAVDLDGAWNGC 125

Query: 144 QAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNA 203
           +A    M+++ +G I+NIAS        G   Y  AK G++GLT+ +  EYA+RN+ VNA
Sbjct: 126 RAVLPGMVERGRGSIVNIASTHAFKIIPGCFPYPVAKHGLLGLTRALGIEYAARNVRVNA 185

Query: 204 IAPGFIASDMT------AKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYIT 257
           IAPG+I + +T               + L   P+ R G+PEEVA    FLA + A  +I 
Sbjct: 186 IAPGYIETQLTEDWWNAQPDPAAARAETLALQPMKRIGRPEEVAMTAVFLASDEAP-FIN 244

Query: 258 GQVLTIDGG 266
              +TIDGG
Sbjct: 245 ATCITIDGG 253

Length = 260

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score =  148 bits (374), Expect = 1e-43
 Identities = 84/247 (34%), Positives = 130/247 (52%), Gaps = 18/247 (7%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA++T A++GIGRA+A +  + G  V+     ++   EE  KE+E   G   T   DV+ 
Sbjct: 4   VALITAAAQGIGRAIALAFAREGANVI-----ATDINEEKLKELERGPG-ITTRVLDVTD 57

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
           +  V ++ K      G +D+L N AG      ++  +   W   ++LN+  ++L  +A  
Sbjct: 58  KEQVAALAKEE----GRIDVLFNCAGFVHHGSILDCEDDDWDFAMNLNVRSMYLMIKAVL 113

Query: 148 KIMMKKKKGRIINIASVVG-LVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
             M+ +K G IIN++SV   + G   +  YS  KA VIGLTK+VA ++A + I  NAI P
Sbjct: 114 PKMLARKDGSIINMSSVASSIKGVPNRFVYSTTKAAVIGLTKSVAADFAQQGIRCNAICP 173

Query: 207 GFIASDMTAKL------GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQV 260
           G + +    +        E+  K    + PLGR   PEEVA L  +LA + +A Y+TG  
Sbjct: 174 GTVDTPSLEERIQAQPDPEEALKAFAARQPLGRLATPEEVAALAVYLASDESA-YVTGTA 232

Query: 261 LTIDGGM 267
           + IDGG 
Sbjct: 233 VVIDGGW 239

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score =  147 bits (373), Expect = 2e-43
 Identities = 91/245 (37%), Positives = 143/245 (58%), Gaps = 7/245 (2%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           V ++TGASRGIGRA A      G  V +NYAR +  AEE    + A+GG+A    GDV+ 
Sbjct: 4   VVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVAN 63

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTL-LMRMKKSQWQDVIDLNLTGVFLCTQAA 146
           EADV +M      A+G +D L+NNAGI   ++ L  M  ++ + + D N+ G +LC + A
Sbjct: 64  EADVIAMFDAVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREA 123

Query: 147 AKIMMKKKKGR---IINIASVVGLVGNIGQ-ANYSAAKAGVIGLTKTVAKEYASRNINVN 202
           A+ +   + GR   I+N++S+   +G+  +  +Y+ +K  V  LT  +AKE     + VN
Sbjct: 124 ARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAGSKGAVDTLTLGLAKELGPHGVRVN 183

Query: 203 AIAPGFIASDMTAKLGE-DLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL 261
           A+ PG I +++ A  G+     ++  + PLGR G+ +EVA  + +L L+ AA Y+TG +L
Sbjct: 184 AVRPGLIETEIHASGGQPGRAARLGAQTPLGRAGEADEVAETIVWL-LSDAASYVTGALL 242

Query: 262 TIDGG 266
            + GG
Sbjct: 243 DVGGG 247

Length = 248

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score =  146 bits (370), Expect = 6e-43
 Identities = 93/257 (36%), Positives = 143/257 (55%), Gaps = 15/257 (5%)

Query: 23  NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFG 82
           N+E  VA+VTGAS G+G   A  L +AG KV V  +R  +  +E+  EIEA GG A    
Sbjct: 6   NLEGKVALVTGASSGLGARFAQVLAQAGAKV-VLASRRVERLKELRAEIEAEGGAAHVVS 64

Query: 83  GDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLC 142
            DV+    +++ +  A    GT+DIL+NN+G++    L+ +  + +  V D N  G F  
Sbjct: 65  LDVTDYQSIKAAVAHAETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFV 124

Query: 143 TQAAAKIMMKKKKG--------RIINIASVVGL--VGNIGQANYSAAKAGVIGLTKTVAK 192
            Q  AK M+ + KG        RIINIASV GL  +  IG   Y  +KA V+ +T+ +A 
Sbjct: 125 AQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQIGL--YCMSKAAVVHMTRAMAL 182

Query: 193 EYASRNINVNAIAPGFIASDMTAKLGE-DLEKKILEKIPLGRYGQPEEVAGLVEFLALNP 251
           E+    INVNAI PG+I +++     E +  +K++  +P  R G+PE++ GL+  LA + 
Sbjct: 183 EWGRHGINVNAICPGYIDTEINHHHWETEQGQKLVSMLPRKRVGKPEDLDGLLLLLAAD- 241

Query: 252 AAGYITGQVLTIDGGMV 268
            + +I G +++ D G  
Sbjct: 242 ESQFINGAIISADDGFG 258

Length = 258

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score =  152 bits (385), Expect = 8e-43
 Identities = 96/244 (39%), Positives = 139/244 (56%), Gaps = 13/244 (5%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           V  +TG +RGIGRAVA     AG ++L+      ++AE   K  EA G + L+   D++ 
Sbjct: 271 VVAITGGARGIGRAVADRFAAAGDRLLI----IDRDAEGAKKLAEALGDEHLSVQADITD 326

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKS--QWQDVIDLNLTGVFLCTQA 145
           EA VES        WG +D+L+NNAGI  +     +++S   +  V D+NL+G F C +A
Sbjct: 327 EAAVESAFAQIQARWGRLDVLVNNAGIA-EVFKPSLEQSAEDFTRVYDVNLSGAFACARA 385

Query: 146 AAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIA 205
           AA++M   + G I+N+ S+  L+    +  Y A+KA V  L++++A E+A   I VN +A
Sbjct: 386 AARLM--SQGGVIVNLGSIASLLALPPRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVA 443

Query: 206 PGFI---ASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLT 262
           PG+I   A       G      I  +IPLGR G PEEVA  + FLA +PAA Y+ G  LT
Sbjct: 444 PGYIETPAVLALKASGRADFDSIRRRIPLGRLGDPEEVAEAIAFLA-SPAASYVNGATLT 502

Query: 263 IDGG 266
           +DGG
Sbjct: 503 VDGG 506

Length = 520

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score =  145 bits (369), Expect = 8e-43
 Identities = 76/243 (31%), Positives = 121/243 (49%), Gaps = 16/243 (6%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTF-GGDVS 86
           V +VTG +RGIG  +A +   AG  V+V   R            E   G+   F   DV 
Sbjct: 8   VVLVTGGTRGIGAGIARAFLAAGATVVV-CGRR---------APETVDGRPAEFHAADVR 57

Query: 87  KEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
               V +++   V+  G +D+L+NNAG +   L         + +++LNL    L  QAA
Sbjct: 58  DPDQVAALVDAIVERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAA 117

Query: 147 AKIMMKKKK-GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIA 205
             +M ++   G I+NI SV G   + G A Y AAKAG++ LT+++A E+A + + VNA+ 
Sbjct: 118 NAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAKAGLLNLTRSLAVEWAPK-VRVNAVV 176

Query: 206 PGFIASDMTAKL--GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTI 263
            G + ++ +       +    +   +PLGR   P ++A    FLA +  A Y++G  L +
Sbjct: 177 VGLVRTEQSELHYGDAEGIAAVAATVPLGRLATPADIAWACLFLA-SDLASYVSGANLEV 235

Query: 264 DGG 266
            GG
Sbjct: 236 HGG 238

Length = 252

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score =  145 bits (369), Expect = 9e-43
 Identities = 89/244 (36%), Positives = 136/244 (55%), Gaps = 10/244 (4%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA+VTGA  G G  +A    + G +V++    ++  AE V  +I   G  A+    DV+K
Sbjct: 7   VAIVTGAGSGFGEGIARRFAQEGARVVI-ADINADGAERVAADI---GEAAIAIQADVTK 62

Query: 88  EADVESMIKTAVDAWGTVDILINNAGIT-RDTLLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
            ADVE+M++ A+  +G +DIL+NNAGIT R+  ++ + + ++  V  +N+  ++L  QA 
Sbjct: 63  RADVEAMVEAALSKFGRLDILVNNAGITHRNKPMLEVDEEEFDRVFAVNVKSIYLSAQAL 122

Query: 147 AKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
              M ++  G IINIAS  GL    G   Y+A+K  V+  TK +A E A RNI VN + P
Sbjct: 123 VPHMEEQGGGVIINIASTAGLRPRPGLTWYNASKGWVVTATKAMAVELAPRNIRVNCLCP 182

Query: 207 GFIASDMTAK-LGEDLE---KKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLT 262
               + + +  +GED      K    IPLGR   P+++A    +LA +  A +ITG  L 
Sbjct: 183 VAGETPLLSMFMGEDTPENRAKFRATIPLGRLSTPDDIANAALYLA-SDEASFITGVALE 241

Query: 263 IDGG 266
           +DGG
Sbjct: 242 VDGG 245

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score =  142 bits (361), Expect = 2e-42
 Identities = 45/170 (26%), Positives = 82/170 (48%), Gaps = 6/170 (3%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARS--SKEAEEVCKEIEASGGQALTFGGDV 85
             ++TG + G+G A+A  L   G + LV  +R   +  A E+  E+EA G +      DV
Sbjct: 2   TVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELEALGAEVTVAACDV 61

Query: 86  SKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQA 145
           +    + +++     A G +D +++NAG+  D  L  +   +++ V+   +TG +   + 
Sbjct: 62  ADRDALAALLAALPAALGPLDGVVHNAGVLDDGPLEELTPERFERVLAPKVTGAWNLHEL 121

Query: 146 AAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYA 195
                     G  +  +SV G++G+ GQANY+AA A +  L +    E  
Sbjct: 122 TR----DLDLGAFVLFSSVAGVLGSPGQANYAAANAALDALAEHRRAEGL 167

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score =  144 bits (365), Expect = 3e-42
 Identities = 77/233 (33%), Positives = 119/233 (51%), Gaps = 4/233 (1%)

Query: 21  AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALT 80
              ++  VA++TGAS GIG A A +L +AG KV++  AR  +  E +  EI A    AL 
Sbjct: 1   MTTLKGKVALITGASSGIGEATARALAEAGAKVVLA-ARREERLEALADEIGAGAALALA 59

Query: 81  FGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVF 140
              DV+  A VE+ I+   + +G +DIL+NNAG+     L       W  +ID N+ G+ 
Sbjct: 60  L--DVTDRAAVEAAIEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLL 117

Query: 141 LCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNIN 200
             T+A    M+++K G IIN+ S+ G     G A Y A KA V   +  + +E A   I 
Sbjct: 118 NGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKAAVRAFSLGLRQELAGTGIR 177

Query: 201 VNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYG-QPEEVAGLVEFLALNPA 252
           V  I+PG + +   + +  + + +  +K+  G     PE++A  V F A  P 
Sbjct: 178 VTVISPGLVETTEFSTVRFEGDDERADKVYKGGTALTPEDIAEAVLFAATQPQ 230

Length = 246

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score =  143 bits (361), Expect = 1e-41
 Identities = 87/259 (33%), Positives = 131/259 (50%), Gaps = 19/259 (7%)

Query: 25  EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGD 84
           E  V VVTGA++GIGR VA  L   G +VL+     S+   EV  EI A+G  A     D
Sbjct: 3   EGKVVVVTGAAQGIGRGVAERLAGEGARVLL--VDRSELVHEVLAEILAAGDAAHVHTAD 60

Query: 85  VSKEADVESMIKTAVDAWGTVDILINNAGIT-RDTLLMRMKKSQWQDVIDLNLTGVFLCT 143
           +   A  + +++ AV+ +G VD+LINN G T         ++ Q +  I  +L     C 
Sbjct: 61  LETYAGAQGVVRAAVERFGRVDVLINNVGGTIWAKPYEHYEEEQIEAEIRRSLFPTLWCC 120

Query: 144 QAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNA 203
           +A    M+++++G I+N++S+      I +  YSAAK GV  LT ++A E+A   I VNA
Sbjct: 121 RAVLPHMLERQQGVIVNVSSIA--TRGIYRIPYSAAKGGVNALTASLAFEHARDGIRVNA 178

Query: 204 IAPGFI-------------ASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALN 250
           +APG                S+      + +  + L+   +GRYG  +E    + FLA +
Sbjct: 179 VAPGGTEAPPRKIPRNAAPMSEQEKVWYQRIVDQTLDSSLMGRYGTIDEQVRAILFLA-S 237

Query: 251 PAAGYITGQVLTIDGGMVM 269
             A YITG VL + GG + 
Sbjct: 238 DEASYITGTVLPVGGGDLG 256

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score =  142 bits (361), Expect = 1e-41
 Identities = 90/245 (36%), Positives = 137/245 (55%), Gaps = 12/245 (4%)

Query: 29  AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKE 88
           A+VTG+S+GIG A+A  L +AG +V++N  R   +     + ++  G  A     DV+  
Sbjct: 13  ALVTGSSQGIGYALAEGLAQAGAEVILN-GRDPAKLAAAAESLKGQGLSAHALAFDVTDH 71

Query: 89  ADVESMIKTAVDAW----GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQ 144
             V    + A+DA+    G +DIL+NNAG+   T L       ++ ++  N++ VF   Q
Sbjct: 72  DAV----RAAIDAFEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQ 127

Query: 145 AAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAI 204
           A A+ M+ +  G+IINIASV   +   G A Y+A K  V  LTK +A ++A   +  NAI
Sbjct: 128 AVARHMIARGAGKIINIASVQSALARPGIAPYTATKGAVGNLTKGMATDWAKHGLQCNAI 187

Query: 205 APGFIASDMTAKLGEDLE-KKILEK-IPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLT 262
           APG+  + + A L  D E    LEK  P GR+G+ EE+ G   FLA + A+ ++ G VL 
Sbjct: 188 APGYFDTPLNAALVADPEFSAWLEKRTPAGRWGKVEELVGACVFLA-SDASSFVNGHVLY 246

Query: 263 IDGGM 267
           +DGG+
Sbjct: 247 VDGGI 251

Length = 255

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score =  141 bits (357), Expect = 4e-41
 Identities = 76/193 (39%), Positives = 108/193 (55%), Gaps = 13/193 (6%)

Query: 27  PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEA------------EEVCKEIEAS 74
            VA VTGASRGIGRA+A  L KAG  V+V  A+++ E             EE  +EIEA+
Sbjct: 4   KVAFVTGASRGIGRAIALRLAKAGATVVVA-AKTASEGDNGSAKSLPGTIEETAEEIEAA 62

Query: 75  GGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDL 134
           GGQAL    DV  E  V ++++  VD +G +DIL+NNAG    +L+      ++  +  +
Sbjct: 63  GGQALPIVVDVRDEDQVRALVEATVDQFGRLDILVNNAGAIWLSLVEDTPAKRFDLMQRV 122

Query: 135 NLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEY 194
           NL G +L +QAA   M+K  +G I+NI+  + L    G   Y+A KAG+  LT  +A E 
Sbjct: 123 NLRGTYLLSQAALPHMVKAGQGHILNISPPLSLRPARGDVAYAAGKAGMSRLTLGLAAEL 182

Query: 195 ASRNINVNAIAPG 207
               I VN++ P 
Sbjct: 183 RRHGIAVNSLWPS 195

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score =  140 bits (354), Expect = 2e-40
 Identities = 83/247 (33%), Positives = 126/247 (51%), Gaps = 16/247 (6%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
            A+VTGA+ GIG+A+A     AG +VL      +         +     + +    D++ 
Sbjct: 4   TALVTGAAGGIGQALARRFLAAGDRVLA-LDIDAAALAAFADAL--GDARFVPVACDLTD 60

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
            A + + +  A    G VD+L+ NAG  R   L     + W+    LNL   +LC +A  
Sbjct: 61  AASLAAALANAAAERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVL 120

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
           + M+K+ +G ++NI SV G +  +G   YSAAKAG+I  TK +A EY    I  NA+APG
Sbjct: 121 EGMLKRSRGAVVNIGSVNG-MAALGHPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPG 179

Query: 208 FIAS-------DMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQV 260
            + +           ++ E+L+K      PL  +  P++VA  V FLA +PAA  ITG  
Sbjct: 180 TVKTQAWEARVAANPQVFEELKK----WYPLQDFATPDDVANAVLFLA-SPAARAITGVC 234

Query: 261 LTIDGGM 267
           L +DGG+
Sbjct: 235 LPVDGGL 241

Length = 257

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score =  140 bits (354), Expect = 2e-40
 Identities = 77/246 (31%), Positives = 126/246 (51%), Gaps = 11/246 (4%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA+VTG ++G+G A+A +  + G   LV   R++++ E    E+EA G +A+    D+S 
Sbjct: 8   VALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSD 67

Query: 88  EADVESMIKTAVDAWGTVDILINNAGIT-RDTLLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
             D   ++  A +A+G +D L+N AG+T R T+L       +     +N+   F   Q A
Sbjct: 68  VEDCRRVVAAADEAFGRLDALVNAAGLTDRGTIL-DTSPELFDRHFAVNVRAPFFLMQEA 126

Query: 147 AKIMMKKK-KGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIA 205
            K+M ++K +G I+NI S+    G    A Y A+K  +  LT+  A       I VN + 
Sbjct: 127 IKLMRRRKAEGTIVNIGSMSAHGGQPFLAAYCASKGALATLTRNAAYALLRNRIRVNGLN 186

Query: 206 PGFIASDMTAKL-------GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITG 258
            G++A++   ++        +D  +K     P GR   P+EVA  V FL L+  +G +TG
Sbjct: 187 IGWMATEGEDRIQREFHGAPDDWLEKAAATQPFGRLLDPDEVARAVAFL-LSDESGLMTG 245

Query: 259 QVLTID 264
            V+  D
Sbjct: 246 SVIDFD 251

Length = 260

>gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional

 Score =  139 bits (353), Expect = 3e-40
 Identities = 78/241 (32%), Positives = 128/241 (53%), Gaps = 6/241 (2%)

Query: 29  AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKE 88
            VV G + GI   +A +  +AG  V V  +RS ++ +    +++ +G + L    DV   
Sbjct: 12  VVVVGGTSGINLGIAQAFARAGANVAVA-SRSQEKVDAAVAQLQQAGPEGLGVSADVRDY 70

Query: 89  ADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAK 148
           A VE+      D +G +D+L++ A          M  + ++ V+D++L G F   +AA  
Sbjct: 71  AAVEAAFAQIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYP 130

Query: 149 IMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGF 208
            ++++    II I++    V    QA+  AAKAGV  LT+T+A E+    I VN+I PG 
Sbjct: 131 -LLRRPGASIIQISAPQAFVPMPMQAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGP 189

Query: 209 IA-SDMTAKL--GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDG 265
           IA ++  A+L    +L+  + + +PL R G  +++A    FLA +  A YITG VL +DG
Sbjct: 190 IAGTEGMARLAPSPELQAAVAQSVPLKRNGTKQDIANAALFLA-SDMASYITGVVLPVDG 248

Query: 266 G 266
           G
Sbjct: 249 G 249

Length = 264

>gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR

 Score =  139 bits (352), Expect = 3e-40
 Identities = 83/252 (32%), Positives = 135/252 (53%), Gaps = 11/252 (4%)

Query: 22  QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTF 81
             +   VA+VT ++ GIG A+A  L + G  V+V    SS++ + V + +    G+ L+ 
Sbjct: 6   DPLANKVALVTASTDGIGLAIARRLAQDGAHVVV----SSRKQQNVDRAVATLQGEGLSV 61

Query: 82  GG---DVSKEADVESMIKTAVDAWGTVDILINNAGITR-DTLLMRMKKSQWQDVIDLNLT 137
            G    V K  D E ++ TAV+  G VDIL++NA +      ++   +  W  ++D+N+ 
Sbjct: 62  TGTVCHVGKAEDRERLVATAVNLHGGVDILVSNAAVNPFFGNILDSTEEVWDKILDVNVK 121

Query: 138 GVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASR 197
              L T+A    M K+  G ++ ++SV       G   Y+ +K  ++GLTK +A E A R
Sbjct: 122 ATALMTKAVVPEMEKRGGGSVVIVSSVAAFHPFPGLGPYNVSKTALLGLTKNLAPELAPR 181

Query: 198 NINVNAIAPGFIASDMTAKLGEDLEKK--ILEKIPLGRYGQPEEVAGLVEFLALNPAAGY 255
           NI VN +APG I +  ++ L  D   +  + E + + R GQPE+ AG+V FL  +  A Y
Sbjct: 182 NIRVNCLAPGLIKTSFSSALWMDKAVEESMKETLRIRRLGQPEDCAGIVSFLC-SEDASY 240

Query: 256 ITGQVLTIDGGM 267
           ITG+ + + GG 
Sbjct: 241 ITGETVVVGGGT 252

This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  138 bits (350), Expect = 5e-40
 Identities = 82/260 (31%), Positives = 131/260 (50%), Gaps = 32/260 (12%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
             +VTG SRG+G A+A +  + G +V+VNY +S   AE +  E+   G +A+    DV+ 
Sbjct: 7   TVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL---GDRAIALQADVTD 63

Query: 88  EADVESMIKTAVDAWG-TVDILINNA-------GITRDTLLMRMKKSQWQDV---IDLNL 136
              V++M  TA + +G  +  ++NNA       G  R           W+D    ++ ++
Sbjct: 64  REQVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKA----DDITWEDFQQQLEGSV 119

Query: 137 TGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQA------NYSAAKAGVIGLTKTV 190
            G     QAA   M ++  GRIINI +      N+ Q       +Y+ AKA ++GLT+ +
Sbjct: 120 KGALNTIQAALPGMREQGFGRIINIGT------NLFQNPVVPYHDYTTAKAALLGLTRNL 173

Query: 191 AKEYASRNINVNAIAPGFI-ASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLAL 249
           A E     I VN ++ G +  +D +A   +++   I    PL +   P+E A  V F A 
Sbjct: 174 AAELGPYGITVNMVSGGLLRTTDASAATPDEVFDLIAATTPLRKVTTPQEFADAVLFFA- 232

Query: 250 NPAAGYITGQVLTIDGGMVM 269
           +P A  +TGQ L +DGG+VM
Sbjct: 233 SPWARAVTGQNLVVDGGLVM 252

Length = 253

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score =  136 bits (344), Expect = 5e-39
 Identities = 79/248 (31%), Positives = 132/248 (53%), Gaps = 12/248 (4%)

Query: 29  AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKE 88
            +VTGA++GIG AVA +L +AG +V     R+ ++  E+  ++   G    T+  DV+  
Sbjct: 1   VLVTGAAQGIGYAVARALAEAGARV-AAVDRNFEQLLELVADLRRYGYPFATYKLDVADS 59

Query: 89  ADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAK 148
           A V+ +++     +G +D+L+N AGI R   +  +    WQ    +N  GVF  +QA + 
Sbjct: 60  AAVDEVVQRLEREYGPIDVLVNVAGILRLGAIDSLSDEDWQATFAVNTFGVFNVSQAVSP 119

Query: 149 IMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGF 208
            M +++ G I+ + S    V  +G A Y+A+KA +  LTK +  E A   I  N ++PG 
Sbjct: 120 RMKRRRSGAIVTVGSNAANVPRMGMAAYAASKAALTMLTKCLGLELAPYGIRCNVVSPGS 179

Query: 209 IASDMTAKL--GEDLEKKILE--------KIPLGRYGQPEEVAGLVEFLALNPAAGYITG 258
             ++M  +L   E  E++++          IPLG+  +P ++A  V FLA +  A +IT 
Sbjct: 180 TDTEMQRQLWNDEYGEQQVIAGSPEQFRLGIPLGKIAEPSDIANAVLFLASD-LASHITM 238

Query: 259 QVLTIDGG 266
             L +DGG
Sbjct: 239 HDLVVDGG 246

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score =  135 bits (342), Expect = 7e-39
 Identities = 83/247 (33%), Positives = 115/247 (46%), Gaps = 16/247 (6%)

Query: 27  PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVS 86
            VA++TG + GIG A A  L K G KV +     +  A    + I     +A     DV+
Sbjct: 1   KVAIITGGASGIGLATAKLLLKKGAKVAILDRNENPGAAAELQAIN-PKVKATFVQCDVT 59

Query: 87  KEADVESMIKTAVDAWGTVDILINNAGIT--RDTLLMRMKKSQWQDVIDLNLTGVFLCTQ 144
               + +  K A++ +G VDILINNAGI   +  L        W+  ID+NLTGV   T 
Sbjct: 60  SWEQLAAAFKKAIEKFGRVDILINNAGILDEKSYLFAGKLPPPWEKTIDVNLTGVINTTY 119

Query: 145 AAAKIM---MKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASR-NIN 200
            A   M      K G I+NI SV GL        YSA+K GV+G T+++A     +  + 
Sbjct: 120 LALHYMDKNKGGKGGVIVNIGSVAGLYPAPQFPVYSASKHGVVGFTRSLADLLEYKTGVR 179

Query: 201 VNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVA-GLVEFLALNPAAGYITGQ 259
           VNAI PGF  + +      DL  K  E +P      PE VA  +V  +  +       G 
Sbjct: 180 VNAICPGFTNTPL----LPDLVAKEAEMLPSAPTQSPEVVAKAIVYLIEDDEK----NGA 231

Query: 260 VLTIDGG 266
           +  +DGG
Sbjct: 232 IWIVDGG 238

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score =  135 bits (342), Expect = 7e-39
 Identities = 69/219 (31%), Positives = 102/219 (46%), Gaps = 15/219 (6%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           + ++TG   GIGR +A    K G KV++    + K AEE    +  +GG+   +  DVSK
Sbjct: 1   IVLITGGGSGIGRLLALEFAKRGAKVVI-LDINEKGAEETANNVRKAGGKVHYYKCDVSK 59

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
             +V    K      G V ILINNAG+     L+ +   + +   ++N    F  T+A  
Sbjct: 60  REEVYEAAKKIKKEVGDVTILINNAGVVSGKKLLELPDEEIEKTFEVNTLAHFWTTKAFL 119

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKE---YASRNINVNAI 204
             M+++  G I+ IASV GL+   G A+Y A+KA  +G  +++  E   Y    I    +
Sbjct: 120 PDMLERNHGHIVTIASVAGLISPAGLADYCASKAAAVGFHESLRLELKAYGKPGIKTTLV 179

Query: 205 APGFIASDMTA--KLGEDLEKKILEKIPLGRYGQPEEVA 241
            P FI + M    K    L   ILE         PE VA
Sbjct: 180 CPYFINTGMFQGVKTPRPLLAPILE---------PEYVA 209

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated

 Score =  135 bits (342), Expect = 8e-39
 Identities = 80/248 (32%), Positives = 138/248 (55%), Gaps = 10/248 (4%)

Query: 29  AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQ--ALTFGGDVS 86
           A +TGA+ G+GRA+A  + + G KV +     +   +    EI A+ G+  A     DV+
Sbjct: 2   AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVT 61

Query: 87  KEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
            EA  ++++  A DA G + +L+NNAG+     + +++  +W+ V+ +N+  +FL  + A
Sbjct: 62  DEAQWQALLAQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHA 121

Query: 147 AKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINV--NAI 204
              +   +   I+NI+SV           Y+A+KA V  LTK++A + A R ++V  N+I
Sbjct: 122 LPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAAVASLTKSIALDCARRGLDVRCNSI 181

Query: 205 APGF----IASDMTAKLGE-DLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQ 259
            P F    I   +  +LGE +  +K+   +PLGR G+P++VA  V +LA + +  ++TG 
Sbjct: 182 HPTFIRTGIVDPIFQRLGEEEATRKLARGVPLGRLGEPDDVAHAVLYLASDESR-FVTGA 240

Query: 260 VLTIDGGM 267
            L IDGG+
Sbjct: 241 ELVIDGGI 248

Length = 251

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score =  135 bits (341), Expect = 1e-38
 Identities = 63/218 (28%), Positives = 112/218 (51%), Gaps = 7/218 (3%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEI-EASGGQALTFGGDVS 86
           V ++TGAS GIG  +A  L + G +++++ AR  +  EEV  E  E           D+S
Sbjct: 5   VVIITGASSGIGEELAYHLARLGARLVLS-ARREERLEEVKSECLELGAPSPHVVPLDMS 63

Query: 87  KEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
              D E +++ A+  +G +DILINNAGI+  +L         + ++++N  G    T+AA
Sbjct: 64  DLEDAEQVVEEALKLFGGLDILINNAGISMRSLFHDTSIDVDRKIMEVNYFGPVALTKAA 123

Query: 147 AKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
              ++++ +G I+ ++S+ G +G   +  Y+A+K  + G   ++  E +  NI+V  + P
Sbjct: 124 LPHLIERSQGSIVVVSSIAGKIGVPFRTAYAASKHALQGFFDSLRAELSEPNISVTVVCP 183

Query: 207 GFIASDMTAK-LGEDLEK--KILEKIPLGRYGQPEEVA 241
           G I +++    L  D     K+ +    G    PEE A
Sbjct: 184 GLIDTNIAMNALSGDGSMSAKMDDTTANGM--SPEECA 219

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score =  134 bits (340), Expect = 3e-38
 Identities = 63/218 (28%), Positives = 102/218 (46%), Gaps = 14/218 (6%)

Query: 29  AVVTGASRGIGRAVATSLGKAGCKV-LVNYARSSKEAEEVCKEIE-ASGGQALTFGGDVS 86
           A++TGAS GIG  +A  L + G  + LV  AR   + E + KE+E  +G +      D+S
Sbjct: 9   ALITGASSGIGAELAKQLARRGYNLILV--ARREDKLEALAKELEDKTGVEVEVIPADLS 66

Query: 87  KEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDV---IDLNLTGVFLCT 143
               +E +     +  G +D+L+NNAG           +    +    I LN+  +   T
Sbjct: 67  DPEALERLEDELKERGGPIDVLVNNAGFGTFGPF---LELSLDEEEEMIQLNILALTRLT 123

Query: 144 QAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNA 203
           +A    M+++  G IINI S  GL+     A YSA KA V+  ++ + +E     + V A
Sbjct: 124 KAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATKAFVLSFSEALREELKGTGVKVTA 183

Query: 204 IAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVA 241
           + PG   ++     G D+      ++ L     PE+VA
Sbjct: 184 VCPGPTRTEFFDAKGSDVYLLSPGELVL----SPEDVA 217

Length = 265

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score =  134 bits (339), Expect = 4e-38
 Identities = 89/259 (34%), Positives = 130/259 (50%), Gaps = 31/259 (11%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           V VVTGA++GIGR VA      G +V++     S+   EV  E+ A+GG+AL    D+  
Sbjct: 10  VVVVTGAAQGIGRGVALRAAAEGARVVL--VDRSELVHEVAAELRAAGGEALALTADLET 67

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMK------KSQWQDVIDLNLTGVFL 141
            A  ++ +  AV+A+G +D+LINN G T     +  K      + Q +  I  +L     
Sbjct: 68  YAGAQAAMAAAVEAFGRIDVLINNVGGT-----IWAKPFEEYEEEQIEAEIRRSLFPTLW 122

Query: 142 CTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINV 201
           C +A    M+ +  G I+N++S+      I +  YSAAK GV  LT ++A EYA   I V
Sbjct: 123 CCRAVLPHMLAQGGGAIVNVSSIA--TRGINRVPYSAAKGGVNALTASLAFEYAEHGIRV 180

Query: 202 NAIAPGFIASDM------TAKLGEDLEKKILEKI--------PLGRYGQPEEVAGLVEFL 247
           NA+APG   +         A   E  EK   ++I         + RYG  +E    + FL
Sbjct: 181 NAVAPGGTEAPPRRVPRNAAPQSEQ-EKAWYQQIVDQTLDSSLMKRYGTIDEQVAAILFL 239

Query: 248 ALNPAAGYITGQVLTIDGG 266
           A + A+ YITG VL + GG
Sbjct: 240 ASDEAS-YITGTVLPVGGG 257

Length = 260

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score =  133 bits (336), Expect = 5e-38
 Identities = 57/190 (30%), Positives = 96/190 (50%), Gaps = 5/190 (2%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEA----SGGQALTFGG 83
             ++TG S GIG+A+A  L K G  V++  ARS  + EE  +EIEA    SG +      
Sbjct: 3   HVLITGGSSGIGKALAKELVKEGANVII-VARSESKLEEAVEEIEAEANASGQKVSYISA 61

Query: 84  DVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCT 143
           D+S   +VE     AV+  G  D+++N AGI+   L   +   +++  +D+N  G     
Sbjct: 62  DLSDYEEVEQAFAQAVEKGGPPDLVVNCAGISIPGLFEDLTAEEFERGMDVNYFGSLNVA 121

Query: 144 QAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNA 203
            A   +M +++ G I+ ++S   LVG  G + Y  +K  + GL +++ +E    NI V+ 
Sbjct: 122 HAVLPLMKEQRPGHIVFVSSQAALVGIYGYSAYCPSKFALRGLAESLRQELKPYNIRVSV 181

Query: 204 IAPGFIASDM 213
           + P    +  
Sbjct: 182 VYPPDTDTPG 191

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score =  132 bits (333), Expect = 9e-38
 Identities = 62/226 (27%), Positives = 101/226 (44%), Gaps = 11/226 (4%)

Query: 27  PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVS 86
            VA+VTGASRGIG  +A +L + G +V +        A        ASGG       D  
Sbjct: 1   KVALVTGASRGIGIEIARALARDGYRVSLGLRNPEDLAALS-----ASGGDVEAVPYDAR 55

Query: 87  KEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
              D  +++    D +G +D+L++NAGI R T L     ++ +    +N+      T+A 
Sbjct: 56  DPEDARALVDALRDRFGRIDVLVHNAGIGRPTTLREGSDAELEAHFSINVIAPAELTRAL 115

Query: 147 AKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
              + +   GR++ + S+ G     G A YSA+K  +  L   + +E     + V+A+ P
Sbjct: 116 LPALREAGSGRVVFLNSLSGKRVLAGNAGYSASKFALRALAHALRQEGWDHGVRVSAVCP 175

Query: 207 GFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPA 252
           GF+ + M   L            P     QP+++A LV  +   P 
Sbjct: 176 GFVDTPMAQGLTLV------GAFPPEEMIQPKDIANLVRMVIELPE 215

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score =  131 bits (332), Expect = 3e-37
 Identities = 65/181 (35%), Positives = 93/181 (51%), Gaps = 1/181 (0%)

Query: 27  PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVS 86
           P A++TGAS GIG+A A +  KAG  + +  ARS    E +  E+ ++G +A  +  D+S
Sbjct: 7   PRALITGASSGIGKATALAFAKAGWDLAL-VARSQDALEALAAELRSTGVKAAAYSIDLS 65

Query: 87  KEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
               +   I   ++ +G  D+LINNAG+     L+ M  S WQ VI LNLT VF C  A 
Sbjct: 66  NPEAIAPGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAV 125

Query: 147 AKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
              M  +  G IIN++S+           Y  +KA +   TK +A+E  S  I V  I  
Sbjct: 126 LPGMRARGGGLIINVSSIAARNAFPQWGAYCVSKAALAAFTKCLAEEERSHGIRVCTITL 185

Query: 207 G 207
           G
Sbjct: 186 G 186

Length = 241

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score =  131 bits (332), Expect = 3e-37
 Identities = 79/258 (30%), Positives = 117/258 (45%), Gaps = 21/258 (8%)

Query: 19  EAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQA 78
             A +       VTGA++GIG AVA +  +AG KV                 +       
Sbjct: 1   MNAMDFSGKTVWVTGAAQGIGYAVALAFVEAGAKV----------IGFDQAFLTQEDYPF 50

Query: 79  LTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTG 138
            TF  DVS  A V  + +  +   G +D+L+N AGI R      +    WQ    +N  G
Sbjct: 51  ATFVLDVSDAAAVAQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGG 110

Query: 139 VFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRN 198
            F   +A      +++ G I+ + S    V  IG A Y A+KA +  L K V  E A   
Sbjct: 111 AFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIGMAAYGASKAALTSLAKCVGLELAPYG 170

Query: 199 INVNAIAPGFIASDMTAKL--GEDLEKKILE--------KIPLGRYGQPEEVAGLVEFLA 248
           +  N ++PG   +DM   L   ED E++++          IPLG+  +P+E+A  V FLA
Sbjct: 171 VRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQEIANAVLFLA 230

Query: 249 LNPAAGYITGQVLTIDGG 266
            +  A +IT Q + +DGG
Sbjct: 231 SD-LASHITLQDIVVDGG 247

Length = 252

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score =  131 bits (331), Expect = 3e-37
 Identities = 79/243 (32%), Positives = 123/243 (50%), Gaps = 14/243 (5%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
             +VTGAS GIGRA A +L + G +V V  AR++   + +  E    G + L    DV  
Sbjct: 11  SVLVTGASSGIGRACAVALAQRGARV-VAAARNAAALDRLAGET---GCEPLRL--DVGD 64

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
           +A     I+ A+ A G  D L+N AGI      + M    +  V+ +N  G  L  +  A
Sbjct: 65  DA----AIRAALAAAGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVA 120

Query: 148 KIMMKK-KKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
           + M+   + G I+N++S   LVG      Y A+KA +  +T+ +  E     I VN++ P
Sbjct: 121 RAMIAAGRGGSIVNVSSQAALVGLPDHLAYCASKAALDAITRVLCVELGPHGIRVNSVNP 180

Query: 207 GFIASDMTAKLGEDLEKK--ILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTID 264
               + M A+   D +K   +L  IPLGR+ + ++VA  + FL L+ AA  ++G  L +D
Sbjct: 181 TVTLTPMAAEAWSDPQKSGPMLAAIPLGRFAEVDDVAAPILFL-LSDAASMVSGVSLPVD 239

Query: 265 GGM 267
           GG 
Sbjct: 240 GGY 242

Length = 245

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score =  131 bits (332), Expect = 4e-37
 Identities = 66/186 (35%), Positives = 104/186 (55%), Gaps = 3/186 (1%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           V ++TGAS GIGRA+A  L +AG + LV  AR+      + +E+   GG+AL    DVS 
Sbjct: 3   VVIITGASEGIGRALAVRLARAGAQ-LVLAARNETRLASLAQELADHGGEALVVPTDVSD 61

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQW-QDVIDLNLTGVFLCTQAA 146
               E +I+ AV  +G +DIL+NNAGIT  +    +      + V+ +N  G   CT AA
Sbjct: 62  AEACERLIEAAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAA 121

Query: 147 AKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
               +K  +G+I+ ++S+ GL G   ++ Y+A+K  + G   ++  E A   + V  + P
Sbjct: 122 LP-HLKASRGQIVVVSSLAGLTGVPTRSGYAASKHALHGFFDSLRIELADDGVAVTVVCP 180

Query: 207 GFIASD 212
           GF+A+D
Sbjct: 181 GFVATD 186

Length = 263

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score =  138 bits (349), Expect = 4e-37
 Identities = 84/261 (32%), Positives = 120/261 (45%), Gaps = 28/261 (10%)

Query: 28  VAVVTGASRGIGRAVATSLGKAG-CKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVS 86
           VA+VTGA+ GIG+A A  L   G C VL +    +  AE    E+     +AL    DV+
Sbjct: 424 VALVTGAAGGIGKATAKRLAAEGACVVLADLDEEA--AEAAAAELGGPD-RALGVACDVT 480

Query: 87  KEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
            EA V++  + A  A+G VDI+++NAGI     +       W+   D+N TG FL  + A
Sbjct: 481 DEAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREA 540

Query: 147 AKIMMKKKKG-RIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIA 205
            +IM  +  G  I+ IAS   +        Y AAKA  + L + +A E     I VN + 
Sbjct: 541 VRIMKAQGLGGSIVFIASKNAVNPGPNFGAYGAAKAAELHLVRQLALELGPDGIRVNGVN 600

Query: 206 P------------GFIASDMTA------KLGEDLEKKILEKIPLGRYGQPEEVAGLVEFL 247
           P             +I +   A      +L E    + L    L R   PE+VA  V FL
Sbjct: 601 PDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNL----LKREVTPEDVAEAVVFL 656

Query: 248 ALNPAAGYITGQVLTIDGGMV 268
           A +      TG ++T+DGG  
Sbjct: 657 A-SGLLSKTTGAIITVDGGNA 676

Length = 681

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score =  131 bits (330), Expect = 4e-37
 Identities = 81/262 (30%), Positives = 131/262 (50%), Gaps = 25/262 (9%)

Query: 24  VEAPVAVVTGASRGIGRAVATSLGKAGCKVLV---NYARSSKEAEEVCKEIEASGGQALT 80
           ++   A++TG++RGIGRA A +  + G +V +   N   +   A E+       G  A  
Sbjct: 1   LDGKTALITGSARGIGRAFAQAYVREGARVAIADINLEAARATAAEI-------GPAACA 53

Query: 81  FGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVF 140
              DV+ +A ++  +   VD WG++DIL+NNA +     ++ + +  +  +  +N++G  
Sbjct: 54  ISLDVTDQASIDRCVAALVDRWGSIDILVNNAALFDLAPIVDITRESYDRLFAINVSGTL 113

Query: 141 LCTQAAAKIMMKKKKG-RIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNI 199
              QA A+ M+ + +G +IIN+AS  G  G      Y A KA VI LT++         I
Sbjct: 114 FMMQAVARAMIAQGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGI 173

Query: 200 NVNAIAPGFIASDM------------TAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFL 247
           NVNAIAPG +  +                 GE  ++ + E +P GR G+ E++ G+  FL
Sbjct: 174 NVNAIAPGVVDGEHWDGVDAKFARYENRPRGEK-KRLVGEAVPFGRMGRAEDLTGMAIFL 232

Query: 248 ALNPAAGYITGQVLTIDGGMVM 269
           A +  A YI  Q   +DGG  M
Sbjct: 233 A-STDADYIVAQTYNVDGGNWM 253

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score =  130 bits (329), Expect = 6e-37
 Identities = 77/241 (31%), Positives = 122/241 (50%), Gaps = 8/241 (3%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA+VTG   GIG+ +     +AG KV+     +  + E      EA G       GDV+ 
Sbjct: 3   VAIVTGGGHGIGKQICLDFLEAGDKVVF----ADIDEERGADFAEAEGPNLFFVHGDVAD 58

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
           E  V+ ++   ++  G +D+L+NNA      +L  +   +W  ++ +NLTG +  ++   
Sbjct: 59  ETLVKFVVYAMLEKLGRIDVLVNNAARGSKGILSSLLLEEWDRILSVNLTGPYELSRYCR 118

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
              + K KGRIINIAS            Y+A+K G++ LT  +A      +I VN I+PG
Sbjct: 119 D-ELIKNKGRIINIASTRAFQSEPDSEAYAASKGGLVALTHALAMSL-GPDIRVNCISPG 176

Query: 208 FI-ASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGG 266
           +I  ++        L ++   + P GR G P+++A LV FL     AG+ITG+   +DGG
Sbjct: 177 WINTTEQQEFTAAPLTQEDHAQHPAGRVGTPKDIANLVLFLC-QQDAGFITGETFIVDGG 235

Query: 267 M 267
           M
Sbjct: 236 M 236

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score =  130 bits (328), Expect = 8e-37
 Identities = 78/249 (31%), Positives = 116/249 (46%), Gaps = 21/249 (8%)

Query: 29  AVVTGASRGIGRAVATSLGKAGCKVL-VNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
            +VTGA++GIGRAVA  L +AG  V+ ++                  G        DV+ 
Sbjct: 1   VIVTGAAQGIGRAVARHLLQAGATVIALDLPFVLLLEY---------GDPLRLTPLDVAD 51

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
            A V  +    +   G +D L+N AG+ R      +    W+    +N+TGVF   QA A
Sbjct: 52  AAAVREVCSRLLAEHGPIDALVNCAGVLRPGATDPLSTEDWEQTFAVNVTGVFNLLQAVA 111

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
             M  ++ G I+ +AS    V  I  A Y A+KA +  L+K +  E A   +  N ++PG
Sbjct: 112 PHMKDRRTGAIVTVASNAAHVPRISMAAYGASKAALASLSKCLGLELAPYGVRCNVVSPG 171

Query: 208 FIASDMTAKL--GEDLEKKILE--------KIPLGRYGQPEEVAGLVEFLALNPAAGYIT 257
              + M   L   ED   +++          IPLG+  QP ++A  V FLA +  AG+IT
Sbjct: 172 STDTAMQRTLWHDEDGAAQVIAGVPEQFRLGIPLGKIAQPADIANAVLFLA-SDQAGHIT 230

Query: 258 GQVLTIDGG 266
              L +DGG
Sbjct: 231 MHDLVVDGG 239

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score =  130 bits (329), Expect = 2e-36
 Identities = 86/264 (32%), Positives = 136/264 (51%), Gaps = 26/264 (9%)

Query: 21  AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEA-EEVCKEIEASGGQAL 79
           +Q +   VA+VTG + GIG ++     K G KV +       +  + VC  +        
Sbjct: 13  SQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCI--VDLQDDLGQNVCDSLGGEPN-VC 69

Query: 80  TFGGDVSKEADVESMIKTAVDAWGTVDILINNAGIT--RDTLLMRMKKSQWQDVIDLNLT 137
            F  DV+ E DV   +   VD +GT+DI++NNAG+T      +  ++ S+++ V D+N+ 
Sbjct: 70  FFHCDVTVEDDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVK 129

Query: 138 GVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASR 197
           GVFL  + AA+IM+  KKG I+++ SV   +G +G   Y+ +K  V+GLT++VA E    
Sbjct: 130 GVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGPHAYTGSKHAVLGLTRSVAAELGKH 189

Query: 198 NINVNAIAPGFIASDMT-AKLGEDLEKKI--------------LEKIPLGRYGQPEEVAG 242
            I VN ++P  + + +  A L ED   +               L+ + L      ++VA 
Sbjct: 190 GIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKGVEL----TVDDVAN 245

Query: 243 LVEFLALNPAAGYITGQVLTIDGG 266
            V FLA + A  YI+G  L IDGG
Sbjct: 246 AVLFLASDEAR-YISGLNLMIDGG 268

Length = 280

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score =  130 bits (328), Expect = 2e-36
 Identities = 77/257 (29%), Positives = 123/257 (47%), Gaps = 28/257 (10%)

Query: 29  AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKE 88
           A+VTG ++GIG A    L +AG +V+   ARS  +                    D++  
Sbjct: 12  ALVTGGTKGIGAATVARLLEAGARVVTT-ARSRPDDLP---------EGVEFVAADLTTA 61

Query: 89  ADVESMIKTAVDAWGTVDILINNAGITRDTL--LMRMKKSQWQDVIDLNLTGVFLCTQAA 146
               ++ +  ++  G VDIL++  G +         +   +WQD ++LNL       +A 
Sbjct: 62  EGCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRAL 121

Query: 147 AKIMMKKKKGRIINIASVVG-LVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIA 205
              M+ +  G II++ S+   L        Y+AAKA +   +K+++KE A + + VN ++
Sbjct: 122 LPGMIARGSGVIIHVTSIQRRLPLPESTTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVS 181

Query: 206 PGFIASD--------MTAKLGEDLE--KKILEK----IPLGRYGQPEEVAGLVEFLALNP 251
           PG+I ++        +    G D E  K+I+      IPLGR  +PEEVA L+ FLA + 
Sbjct: 182 PGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPLGRPAEPEEVAELIAFLA-SD 240

Query: 252 AAGYITGQVLTIDGGMV 268
            A  ITG    IDGG V
Sbjct: 241 RAASITGTEYVIDGGTV 257

Length = 260

>gnl|CDD|236389 PRK09134, PRK09134, short chain dehydrogenase; Provisional

 Score =  129 bits (327), Expect = 2e-36
 Identities = 82/250 (32%), Positives = 127/250 (50%), Gaps = 28/250 (11%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
            A+VTGA+R IGRA+A  L   G  V V+Y RS  EAE +  EI A G +A+    D++ 
Sbjct: 11  AALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLAD 70

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
           EA+V +++  A  A G + +L+NNA +          ++ W   +  NL   F+  QA A
Sbjct: 71  EAEVRALVARASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFA 130

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQ---------ANYSAAKAGVIGLTKTVAKEYASRN 198
           + +    +G ++N+         I Q          +Y+ +KA +   T+T+A+  A R 
Sbjct: 131 RALPADARGLVVNM---------IDQRVWNLNPDFLSYTLSKAALWTATRTLAQALAPR- 180

Query: 199 INVNAIAPG--FIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYI 256
           I VNAI PG    +   +    ED  ++     PLGR   PEE+A  V +L   P+   +
Sbjct: 181 IRVNAIGPGPTLPSGRQSP---EDFARQH-AATPLGRGSTPEEIAAAVRYLLDAPS---V 233

Query: 257 TGQVLTIDGG 266
           TGQ++ +DGG
Sbjct: 234 TGQMIAVDGG 243

Length = 258

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score =  128 bits (324), Expect = 3e-36
 Identities = 79/229 (34%), Positives = 120/229 (52%), Gaps = 2/229 (0%)

Query: 24  VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGG 83
           ++  VA+VTGAS GIG A A +L   G  V +  AR     E +  E+EA GG+AL    
Sbjct: 1   LQGKVALVTGASSGIGEATARALAAEGAAVAI-AARRVDRLEALADELEAEGGKALVLEL 59

Query: 84  DVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCT 143
           DV+ E  V++ ++  V+A G +DIL+NNAGI     +     + W  +ID NL G+   T
Sbjct: 60  DVTDEQQVDAAVERTVEALGRLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYTT 119

Query: 144 QAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNA 203
            AA    + + KG I+NI+SV G V     A Y+A K GV   ++ + +E   R + V  
Sbjct: 120 HAALPHHLLRNKGTIVNISSVAGRVAVRNSAVYNATKFGVNAFSEGLRQEVTERGVRVVV 179

Query: 204 IAPGFIASDMTAKLGEDLEKK-ILEKIPLGRYGQPEEVAGLVEFLALNP 251
           I PG + +++   +   + K+   E+I   R  Q E++A  V +    P
Sbjct: 180 IEPGTVDTELRDHITHTITKEAYEERISTIRKLQAEDIAAAVRYAVTAP 228

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional

 Score =  127 bits (320), Expect = 1e-35
 Identities = 84/256 (32%), Positives = 141/256 (55%), Gaps = 11/256 (4%)

Query: 22  QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTF 81
           +N++  VA+VTGASRGIGRA+A  L   G  V ++Y R+ + A+E  +EIE++GG+A   
Sbjct: 2   KNLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLI 61

Query: 82  GGDVSKEADVESMIKTAVDAW----GT--VDILINNAGITRDTLLMRMKKSQWQDVIDLN 135
             D++    V+ +++   +      GT  +DIL+NNAGI     +    +  + +++ +N
Sbjct: 62  EADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVN 121

Query: 136 LTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYA 195
           +   F   Q    ++  + +GR+INI+S    +G  G   Y  +K  +  +T  +AK   
Sbjct: 122 IKAPFFLIQQTLPLL--RAEGRVINISSAEVRLGFTGSIAYGLSKGALNTMTLPLAKHLG 179

Query: 196 SRNINVNAIAPGFIASDMTAKLGEDLEKK--ILEKIPLGRYGQPEEVAGLVEFLALNPAA 253
            R I VN I PG+  +D+ AKL +D E +         GR GQ E++A  V FLA + + 
Sbjct: 180 ERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNSSVFGRIGQVEDIADAVAFLASSDSR 239

Query: 254 GYITGQVLTIDGGMVM 269
            ++TGQ++ + GG  +
Sbjct: 240 -WVTGQIIDVSGGFCL 254

Length = 254

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score =  127 bits (321), Expect = 2e-35
 Identities = 77/257 (29%), Positives = 121/257 (47%), Gaps = 27/257 (10%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           V VV+G   G+GR +A    +AG  V V  AR+++  +EV  EI+  G +AL    D++ 
Sbjct: 7   VVVVSGVGPGLGRTLAVRAARAGADV-VLAARTAERLDEVAAEIDDLGRRALAVPTDITD 65

Query: 88  EADVESMIKTAVDAWGTVDILINNA-------GITRDTLLMRMKKSQWQDVIDLNLTGVF 140
           E    +++  A++ +G VD L+NNA        +           + W+ VI+LN+ G  
Sbjct: 66  EDQCANLVALALERFGRVDALVNNAFRVPSMKPLADADF------AHWRAVIELNVLGTL 119

Query: 141 LCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNIN 200
             TQA     + +  G I+ I S+V          Y  AK  ++  ++++A E   + I 
Sbjct: 120 RLTQAFTP-ALAESGGSIVMINSMVLRHSQPKYGAYKMAKGALLAASQSLATELGPQGIR 178

Query: 201 VNAIAPGFIASDMT--------AKLG---EDLEKKILEKIPLGRYGQPEEVAGLVEFLAL 249
           VN++APG+I  D           K G   E +  +      L R    +EVA  V FLA 
Sbjct: 179 VNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRLPTDDEVASAVLFLA- 237

Query: 250 NPAAGYITGQVLTIDGG 266
           +  A  ITGQ L ++ G
Sbjct: 238 SDLARAITGQTLDVNCG 254

Length = 258

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score =  126 bits (318), Expect = 2e-35
 Identities = 70/233 (30%), Positives = 109/233 (46%), Gaps = 20/233 (8%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA+VTGA+RGIG  +   L K+G   ++  AR  +  +   +++ A G        DV+ 
Sbjct: 2   VALVTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLRAEGLSVRFHQLDVTD 61

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKS-QWQDVIDLNLTGVFLCTQAA 146
           +A +E+      + +G +DIL+NNAGI             Q ++ +  N  G    TQA 
Sbjct: 62  DASIEAAADFVEEKYGGLDILVNNAGIAFKGFDDSTPTREQARETMKTNFFGTVDVTQAL 121

Query: 147 AKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
             ++ K   GRI+N++S +G +     + Y  +KA +  LT+ +AKE     I VNA  P
Sbjct: 122 LPLLKKSPAGRIVNVSSGLGSL----TSAYGVSKAALNALTRILAKELKETGIKVNACCP 177

Query: 207 GFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQ 259
           G++ +DM                       PEE A    +LAL P  G  TG+
Sbjct: 178 GWVKTDMGGGKAPK---------------TPEEGAETPVYLALLPPDGEPTGK 215

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score =  126 bits (317), Expect = 5e-35
 Identities = 73/226 (32%), Positives = 116/226 (51%), Gaps = 12/226 (5%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQAL-TFGGDVS 86
           VA+VTGAS GIG AVA +L + G KV V  AR   + E +  E +++G   L  +  D+S
Sbjct: 8   VALVTGASVGIGAAVARALVQHGMKV-VGCARRVDKIEALAAECQSAGYPTLFPYQCDLS 66

Query: 87  KEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
            E  + SM          VD+ INNAG+ R   L+  K   W+++ D+N+  + +CT+ A
Sbjct: 67  NEEQILSMFSAIRTQHQGVDVCINNAGLARPEPLLSGKTEGWKEMFDVNVLALSICTREA 126

Query: 147 AKIMMKKK--KGRIINIASVVGLVGNIGQAN----YSAAKAGVIGLTKTVAKE--YASRN 198
            + M ++    G IINI S+ G    +   +    Y+A K  V  LT+ + +E   A  +
Sbjct: 127 YQSMKERNVDDGHIININSMSG--HRVPPVSVFHFYAATKHAVTALTEGLRQELREAKTH 184

Query: 199 INVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLV 244
           I   +I+PG + ++   KL ++  +K           +PE+VA  V
Sbjct: 185 IRATSISPGLVETEFAFKLHDNDPEKAAATYESIPCLKPEDVANAV 230

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score =  125 bits (317), Expect = 7e-35
 Identities = 80/245 (32%), Positives = 125/245 (51%), Gaps = 15/245 (6%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA+VTG +  IG AVA +L  AG +V +     +     V   +   G +A     D++ 
Sbjct: 8   VAIVTGGATLIGAAVARALVAAGARVAI-VDIDADNGAAVAASL---GERARFIATDITD 63

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
           +A +E  + T V  +G VDIL+N A    D  L    ++ W   +D+NL    +  QAA 
Sbjct: 64  DAAIERAVATVVARFGRVDILVNLACTYLDDGL-ASSRADWLAALDVNLVSAAMLAQAAH 122

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
              + +  G I+N  S+       G+  Y A+KA +  LT+++A + A   I VN+++PG
Sbjct: 123 P-HLARGGGAIVNFTSISAKFAQTGRWLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPG 181

Query: 208 FIASDMTAKL-GEDLEKKILEKI-----PLGRYGQPEEVAGLVEFLALNPAAGYITGQVL 261
           +  S +  +L G D  K   +++      LGR G PEEVA +V FL  + AA ++TG   
Sbjct: 182 WTWSRVMDELSGGDRAKA--DRVAAPFHLLGRVGDPEEVAQVVAFL-CSDAASFVTGADY 238

Query: 262 TIDGG 266
            +DGG
Sbjct: 239 AVDGG 243

Length = 261

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score =  124 bits (312), Expect = 2e-34
 Identities = 85/250 (34%), Positives = 121/250 (48%), Gaps = 14/250 (5%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA+VTG + GIG A+A  L   G  V+V  A    E  E   E    G +AL    DV+ 
Sbjct: 3   VALVTGGASGIGLAIAKRLAAEGAAVVV--ADIDPEIAEKVAEAAQGGPRALGVQCDVTS 60

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
           EA V+S  + AV  +G +DI+++NAGI   + +       W   +D+NLTG FL ++ A 
Sbjct: 61  EAQVQSAFEQAVLEFGGLDIVVSNAGIATSSPIAETSLEDWNRSMDINLTGHFLVSREAF 120

Query: 148 KIMMKKKK-GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
           +IM  +   G I+  AS   +      A YSAAKA    L + +A E     I VN + P
Sbjct: 121 RIMKSQGIGGNIVFNASKNAVAPGPNAAAYSAAKAAEAHLARCLALEGGEDGIRVNTVNP 180

Query: 207 -----GFIASDMT-----AKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYI 256
                G    +       AK    LE++   +  L R   PE+VA  V  +A +   G  
Sbjct: 181 DAVFRGSKIWEGVWRAARAKAYGLLEEEYRTRNLLKREVLPEDVAEAVVAMA-SEDFGKT 239

Query: 257 TGQVLTIDGG 266
           TG ++T+DGG
Sbjct: 240 TGAIVTVDGG 249

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score =  124 bits (313), Expect = 3e-34
 Identities = 56/180 (31%), Positives = 98/180 (54%), Gaps = 3/180 (1%)

Query: 30  VVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEA-EEVCKEIEASGGQALTFGGDVSKE 88
           ++TGA+ G+GRA+A    + G ++ +  A  ++E  EE  K +  +GG       DV   
Sbjct: 4   MITGAASGLGRAIALRWAREGWRLAL--ADVNEEGGEETLKLLREAGGDGFYQRCDVRDY 61

Query: 89  ADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAK 148
           + + ++ +   + WG +D+++NNAG+        +    W   I +NL GV    +A   
Sbjct: 62  SQLTALAQACEEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLP 121

Query: 149 IMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGF 208
           +  ++K GRI+NIAS+ GL+     ++Y+ AKAGV+ L++T+  E A   I V+ + P F
Sbjct: 122 LFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSF 181

Length = 270

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score =  123 bits (311), Expect = 3e-34
 Identities = 68/250 (27%), Positives = 108/250 (43%), Gaps = 14/250 (5%)

Query: 21  AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALT 80
             +++  V  +TG   G+GRA A  L   G +V    A   + A  + + +      AL 
Sbjct: 2   EHSLQGKVVAITGGFGGLGRATAAWLAARGARV----ALIGRGAAPLSQTLPGVPADALR 57

Query: 81  FGG-DVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGV 139
            GG D+         +      +G +D L+N AG      +       W  +  +N+   
Sbjct: 58  IGGIDLVDPQAARRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTT 117

Query: 140 FLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNI 199
              ++AA   +     GRI+NI +   L    G   Y+AAKAGV  LT+ +A E   R I
Sbjct: 118 LNASKAALPALTASGGGRIVNIGAGAALKAGPGMGAYAAAKAGVARLTEALAAELLDRGI 177

Query: 200 NVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQ 259
            VNA+ P  I +        D +          R+  PE++A ++ FL L+  A  ITG 
Sbjct: 178 TVNAVLPSIIDTPPNRADMPDAD--------FSRWVTPEQIAAVIAFL-LSDEAQAITGA 228

Query: 260 VLTIDGGMVM 269
            + +DGG+ +
Sbjct: 229 SIPVDGGVAL 238

Length = 239

>gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional

 Score =  123 bits (310), Expect = 3e-34
 Identities = 87/252 (34%), Positives = 134/252 (53%), Gaps = 13/252 (5%)

Query: 24  VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGG 83
           ++  VA+VTGASRGIGRA+A  L   G  V ++Y    +EAEE   EI+++GG A + G 
Sbjct: 2   LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGA 61

Query: 84  DVSKEADVESMIKTAVD-------AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNL 136
           ++     VE++  +++D            DILINNAGI     +    +  +  ++ +N 
Sbjct: 62  NLESLHGVEALY-SSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNA 120

Query: 137 TGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYAS 196
              F   Q A   +  +   RIINI+S    +       YS  K  +  +T T+AK+  +
Sbjct: 121 KAPFFIIQQALSRL--RDNSRIINISSAATRISLPDFIAYSMTKGAINTMTFTLAKQLGA 178

Query: 197 RNINVNAIAPGFIASDMTAKLGED-LEKKILEKI-PLGRYGQPEEVAGLVEFLALNPAAG 254
           R I VNAI PGFI +DM A+L  D + K+    I    R G+ E++A    FLA +P + 
Sbjct: 179 RGITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLA-SPDSR 237

Query: 255 YITGQVLTIDGG 266
           ++TGQ++ + GG
Sbjct: 238 WVTGQLIDVSGG 249

Length = 252

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score =  122 bits (308), Expect = 1e-33
 Identities = 78/253 (30%), Positives = 123/253 (48%), Gaps = 23/253 (9%)

Query: 29  AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQAL-TFGGDVSK 87
            ++TGAS+GIG A A +    GC + +  AR +   E +  ++ A+ G  +     D+S 
Sbjct: 10  VLITGASKGIGAAAAEAFAAEGCHLHL-VARDADALEALAADLRAAHGVDVAVHALDLSS 68

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
               E +   A    G +DIL+NNAG      L  +  + W+   +L + G    T+ A 
Sbjct: 69  PEAREQLAAEA----GDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAY 124

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANY---SAAKAGVIGLTKTVAKEYASRNINVNAI 204
             M  +  G I+N   V+G  G    A+Y   SA  A ++  T+ +  +     + V  +
Sbjct: 125 PRMKARGSGVIVN---VIGAAGENPDADYICGSAGNAALMAFTRALGGKSLDDGVRVVGV 181

Query: 205 APGFIASDMTAKL----------GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAG 254
            PG +A+D    L           E   +++L  +PLGR   PEEVA LV FLA +P +G
Sbjct: 182 NPGPVATDRMLTLLKGRARAELGDESRWQELLAGLPLGRPATPEEVADLVAFLA-SPRSG 240

Query: 255 YITGQVLTIDGGM 267
           Y +G V+T+DGG+
Sbjct: 241 YTSGTVVTVDGGI 253

Length = 259

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  121 bits (305), Expect = 3e-33
 Identities = 53/194 (27%), Positives = 98/194 (50%), Gaps = 14/194 (7%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           V ++TG S GIG A+A +L   G +V    A +++  +++    E           DV+ 
Sbjct: 2   VVLITGCSSGIGLALALALAAQGYRV---IA-TARNPDKLESLGELLNDNLEVLELDVTD 57

Query: 88  EADVESMIKTAVDAWGTVDILINNAGIT-----RDTLLMRMKKSQWQDVIDLNLTGVFLC 142
           E  +++ +K  ++ +G +D+L+NNAG        +T +      + +++ ++N+ G    
Sbjct: 58  EESIKAAVKEVIERFGRIDVLVNNAGYGLFGPLEETSI-----EEVRELFEVNVFGPLRV 112

Query: 143 TQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
           T+A   +M K+  GRI+N++SV GLV       Y A+KA +  L++++  E A   I V 
Sbjct: 113 TRAFLPLMRKQGSGRIVNVSSVAGLVPTPFLGPYCASKAALEALSESLRLELAPFGIKVT 172

Query: 203 AIAPGFIASDMTAK 216
            I PG + +     
Sbjct: 173 IIEPGPVRTGFADN 186

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional

 Score =  122 bits (307), Expect = 4e-33
 Identities = 77/242 (31%), Positives = 125/242 (51%), Gaps = 7/242 (2%)

Query: 29  AVVTGASRGIGRAVATSLGKAGCKVLVNYARS-SKEAEEVCKEIEASGGQALTFGGDVSK 87
           A++TGA  GIGRA A +  + G  + +NY     ++A EV + I+A G +A+   GD+  
Sbjct: 58  ALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKD 117

Query: 88  EADVESMIKTAVDAWGTVDILINNAGI-TRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
           EA    +++ AV   G +DIL+N AG  T    +  +   Q+      N+  +F   +AA
Sbjct: 118 EAFCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAA 177

Query: 147 AKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
              +       IIN  S+     +    +Y++ KA ++  TK +AK+ A + I VNA+AP
Sbjct: 178 IPHL--PPGASIINTGSIQSYQPSPTLLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAP 235

Query: 207 GFIASDMTAKLGEDLEK--KILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTID 264
           G + + +    G+  EK      + P+ R GQP E+A L   LA +  + Y+TG+V  + 
Sbjct: 236 GPVWTPLQPSGGQPPEKIPDFGSETPMKRPGQPVEMAPLYVLLA-SQESSYVTGEVFGVT 294

Query: 265 GG 266
           GG
Sbjct: 295 GG 296

Length = 300

>gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs

 Score =  120 bits (302), Expect = 1e-32
 Identities = 76/244 (31%), Positives = 124/244 (50%), Gaps = 11/244 (4%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           +A+VTGASRGIGR +A  LG+AG  V +       +     +EIEA GG+ +    D S 
Sbjct: 5   IALVTGASRGIGRGIALQLGEAGATVYITGRTILPQLPGTAEEIEARGGKCIPVRCDHSD 64

Query: 88  EADVESMI-KTAVDAWGTVDILINNAGITRDTLLMRMKK-------SQWQDVIDLNLTGV 139
           + +VE++  + A +  G +DIL+NNA      +L+ + K       + W D+ ++ L   
Sbjct: 65  DDEVEALFERVAREQQGRLDILVNNAYAAVQLILVGVAKPFWEEPPTIWDDINNVGLRAH 124

Query: 140 FLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNI 199
           + C+  AA +M+K  KG I+ I+S  GL      A Y   KA +  +   +A E     +
Sbjct: 125 YACSVYAAPLMVKAGKGLIVIISSTGGLEYLFNVA-YGVGKAAIDRMAADMAHELKPHGV 183

Query: 200 NVNAIAPGFIASDMTAKLGEDLEKKILEKIP-LGRYGQPEEVAGL-VEFLALNPAAGYIT 257
            V ++ PGF+ +++  ++ ED E     K       G+  E +G  V  LA +P    ++
Sbjct: 184 AVVSLWPGFVRTELVLEMPEDDEGSWHAKERDAFLNGETTEYSGRCVVALAADPDLMELS 243

Query: 258 GQVL 261
           G+VL
Sbjct: 244 GRVL 247

This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score =  119 bits (300), Expect = 3e-32
 Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 21/202 (10%)

Query: 22  QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTF 81
            ++   V  +TG +RGIG A A +L   G +V +        A+E   E+    G  L  
Sbjct: 1   DDLRGKVVAITGGARGIGLATARALAALGARVAIG-DLDEALAKETAAELGLVVGGPL-- 57

Query: 82  GGDVSKEADVESMIKTAVDAWGTVDILINNAGITR--------DTLLMRMKKSQWQDVID 133
             DV+  A   + +       G +D+L+NNAG+          D +  R+        +D
Sbjct: 58  --DVTDPASFAAFLDAVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRI--------LD 107

Query: 134 LNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKE 193
           +N+ GV L ++ AA  M+ + +G ++N+AS+ G +   G A Y A+K  V+G T     E
Sbjct: 108 VNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCASKHAVVGFTDAARLE 167

Query: 194 YASRNINVNAIAPGFIASDMTA 215
                ++V+ + P F+ +++ A
Sbjct: 168 LRGTGVHVSVVLPSFVNTELIA 189

Length = 273

>gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  118 bits (298), Expect = 3e-32
 Identities = 74/253 (29%), Positives = 124/253 (49%), Gaps = 16/253 (6%)

Query: 28  VAVVTGASR--GIGRAVATSLGKAGCKV----LVNYARS------SKEAEEVCKEIEASG 75
           VAVVTG SR  GIG A+   L +AG  +       Y +         E  ++ +E+  +G
Sbjct: 8   VAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNG 67

Query: 76  GQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLN 135
            +  +   D+++    + ++    +  G   IL+NNA  + +     +   +      +N
Sbjct: 68  VKVSSMELDLTQNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVN 127

Query: 136 LTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYA 195
           +    L +   A+   KK  GRIIN+ S       +G+  Y+A K  +  LT ++A E A
Sbjct: 128 VRATTLLSSQFARGFDKKSGGRIINMTSGQFQGPMVGELAYAATKGAIDALTSSLAAEVA 187

Query: 196 SRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGY 255
              I VNAI PG   +D T  + E++++ +L   P GR G+P++ A L++FLA   A  +
Sbjct: 188 HLGITVNAINPG--PTD-TGWMTEEIKQGLLPMFPFGRIGEPKDAARLIKFLASEEAE-W 243

Query: 256 ITGQVLTIDGGMV 268
           ITGQ++  +GG  
Sbjct: 244 ITGQIIHSEGGFK 256

Length = 256

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score =  117 bits (295), Expect = 6e-32
 Identities = 64/191 (33%), Positives = 107/191 (56%), Gaps = 9/191 (4%)

Query: 29  AVVTGASRGIGRAVATSLGKAG-CKVLVNYARSSKEAEEVCKEIEA-SGGQALTFGGDVS 86
           AVVTGA+ GIG+A A  L K G   +L+  +R+ ++ + V KEIE   G +  T   D S
Sbjct: 4   AVVTGATDGIGKAYAEELAKRGFNVILI--SRTQEKLDAVAKEIEEKYGVETKTIAADFS 61

Query: 87  KEADVESMIKTAVDAWGT-VDILINNAGITRD--TLLMRMKKSQWQDVIDLNLTGVFLCT 143
              D+   I+  ++  G  + IL+NN GI+       +   + + QD+I++N+      T
Sbjct: 62  AGDDIYERIEKELE--GLDIGILVNNVGISHSIPEYFLETPEDELQDIINVNVMATLKMT 119

Query: 144 QAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNA 203
           +     M+K+KKG I+NI+S  GL+     A YSA+KA +   ++ + +EY S+ I+V +
Sbjct: 120 RLILPGMVKRKKGAIVNISSFAGLIPTPLLATYSASKAFLDFFSRALYEEYKSQGIDVQS 179

Query: 204 IAPGFIASDMT 214
           + P  +A+ M+
Sbjct: 180 LLPYLVATKMS 190

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score =  118 bits (297), Expect = 6e-32
 Identities = 78/253 (30%), Positives = 124/253 (49%), Gaps = 22/253 (8%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           V +VTG + GIG A++  L + G  + V + RS+ + E   +E+ A   +A     D++ 
Sbjct: 9   VVIVTGGASGIGAAISLRLAEEGA-IPVIFGRSAPDDEFA-EELRALQPRAEFVQVDLTD 66

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
           +A     ++  V  +G +D L+NNAG+  D + +   +  +   ++ NL   ++      
Sbjct: 67  DAQCRDAVEQTVAKFGRIDGLVNNAGVN-DGVGLEAGREAFVASLERNLIHYYVMAHYCL 125

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
              +K  +G I+NI+S   L G  G + Y+AAK   + LT+  A   A   + VNA+ P 
Sbjct: 126 P-HLKASRGAIVNISSKTALTGQGGTSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPA 184

Query: 208 ---------FIAS--DMTAKLGEDLEKKILEKIPLG-RYGQPEEVAGLVEFLALNPAAGY 255
                    +IA+  D  AKL       I  KIPLG R    EE+A    FL L+  + +
Sbjct: 185 EVMTPLYENWIATFDDPEAKL-----AAITAKIPLGHRMTTAEEIADTAVFL-LSERSSH 238

Query: 256 ITGQVLTIDGGMV 268
            TGQ L +DGG V
Sbjct: 239 TTGQWLFVDGGYV 251

Length = 258

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score =  117 bits (295), Expect = 1e-31
 Identities = 82/252 (32%), Positives = 126/252 (50%), Gaps = 22/252 (8%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASG-GQALTFGGDVS 86
           V +VTG SRGIGR +  +  + G KV V  AR     + +  E+  +G G       DV+
Sbjct: 11  VVIVTGGSRGIGRGIVRAFVENGAKV-VFCARGEAAGQALESELNRAGPGSCKFVPCDVT 69

Query: 87  KEADVESMIKTAVDAWGTVDILINNAGI------TRDTLLMRMKKSQWQDVIDLNLTGVF 140
           KE D++++I   V+ +G +D L+NNAG       T +T        +++D+++LNL   F
Sbjct: 70  KEEDIKTLISVTVERFGRIDCLVNNAGWHPPHQTTDET-----SAQEFRDLLNLNLISYF 124

Query: 141 LCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNIN 200
           L ++ A    ++K +G IIN++S+VG +G    A Y A K  +  +TK +A + +   + 
Sbjct: 125 LASKYALP-HLRKSQGNIINLSSLVGSIGQKQAAPYVATKGAITAMTKALAVDESRYGVR 183

Query: 201 VNAIAPGFIASDM---TAKLGEDLEKKILEKI---PLGRYGQPEEVAGLVEFLALNPAAG 254
           VN I+PG I + +    A    D    I E      LGR G   E      FLA    A 
Sbjct: 184 VNCISPGNIWTPLWEELAAQTPDTLATIKEGELAQLLGRMGTEAESGLAALFLAAE--AT 241

Query: 255 YITGQVLTIDGG 266
           + TG  L + GG
Sbjct: 242 FCTGIDLLLSGG 253

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score =  115 bits (290), Expect = 2e-31
 Identities = 72/226 (31%), Positives = 114/226 (50%), Gaps = 6/226 (2%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           V V+TGAS GIGRA A +  + G KV++  ARS++   E+ +E+   GG+A+    DV+ 
Sbjct: 2   VVVITGASSGIGRATALAFAERGAKVVL-AARSAEALHELAREVRELGGEAIAVVADVAD 60

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
            A VE    TAV+ +G +D  +NNAG+        +   +++ V D+N  G    T AA 
Sbjct: 61  AAQVERAADTAVERFGRIDTWVNNAGVAVFGRFEDVTPEEFRRVFDVNYLGHVYGTLAAL 120

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKE--YASRNINVNAIA 205
             + ++  G +IN+ S++G      QA YSA+K  V G T+++  E  +    I+V  + 
Sbjct: 121 PHLRRRGGGALINVGSLLGYRSAPLQAAYSASKHAVRGFTESLRAELAHDGAPISVTLVQ 180

Query: 206 PGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNP 251
           P  + +         + KK     P     QPE VA  +   A +P
Sbjct: 181 PTAMNTPFFGHARSYMGKK---PKPPPPIYQPERVAEAIVRAAEHP 223

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score =  116 bits (292), Expect = 3e-31
 Identities = 77/256 (30%), Positives = 118/256 (46%), Gaps = 22/256 (8%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA++TG   GIGRA+       G +V V   RS+++   + +     G   L   GDV+ 
Sbjct: 8   VALITGGGSGIGRALVERFLAEGARVAV-LERSAEKLASLRQRF---GDHVLVVEGDVTS 63

Query: 88  EADVESMIKTAVDAWGTVDILINNAGI-TRDTLLMRMKKSQ----WQDVIDLNLTGVFLC 142
            AD +  +   VDA+G +D  + NAGI   +T L+ +        + ++ ++N+ G  L 
Sbjct: 64  YADNQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLG 123

Query: 143 TQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
            +AA    +K   G +I   S        G   Y+A+K  V+GL + +A E A + I VN
Sbjct: 124 AKAALP-ALKASGGSMIFTLSNSSFYPGGGGPLYTASKHAVVGLVRQLAYELAPK-IRVN 181

Query: 203 AIAPGFIASDM--TAKLG---------EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNP 251
            +APG   +D+   A LG           L   I    PL    QPE+  G    LA   
Sbjct: 182 GVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPLQFAPQPEDHTGPYVLLASRR 241

Query: 252 AAGYITGQVLTIDGGM 267
            +  +TG V+  DGG+
Sbjct: 242 NSRALTGVVINADGGL 257

Length = 263

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score =  115 bits (290), Expect = 3e-31
 Identities = 75/242 (30%), Positives = 122/242 (50%), Gaps = 13/242 (5%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
            A+VTGA +GIGRA   +L KAG +V V  +R+  + + + +E    G + +    D+S 
Sbjct: 9   RALVTGAGKGIGRATVKALAKAGARV-VAVSRTQADLDSLVRE--CPGIEPVC--VDLSD 63

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
               E     A+ + G VD+L+NNA +      + + K  +    D+N+  V   +Q  A
Sbjct: 64  WDATEE----ALGSVGPVDLLVNNAAVAILQPFLEVTKEAFDRSFDVNVRAVIHVSQIVA 119

Query: 148 KIMMKKK-KGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
           + M+ +   G I+N++S            Y + KA +  LTK +A E     I VN++ P
Sbjct: 120 RGMIARGVPGSIVNVSSQASQRALTNHTVYCSTKAALDMLTKVMALELGPHKIRVNSVNP 179

Query: 207 GFIASDMTAKLGEDLEK--KILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTID 264
             + +DM      D EK  K+L +IPLG++ + E+V   + FL L+  +   TG  L +D
Sbjct: 180 TVVMTDMGRDNWSDPEKAKKMLNRIPLGKFAEVEDVVNAILFL-LSDKSSMTTGSTLPVD 238

Query: 265 GG 266
           GG
Sbjct: 239 GG 240

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  115 bits (291), Expect = 3e-31
 Identities = 82/251 (32%), Positives = 118/251 (47%), Gaps = 16/251 (6%)

Query: 28  VAVVTGASR--GIGRAVATSLGKAGCKVLVNYAR----------SSKEAEEVCKEIEASG 75
           +A+VTGASR  GIG AV   L   G  +   Y              KE   + +EIE+ G
Sbjct: 7   IALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYG 66

Query: 76  GQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLN 135
            +      D+S+      +     +  G   ILINNA  +  T L  +   Q      +N
Sbjct: 67  VRCEHMEIDLSQPYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVN 126

Query: 136 LTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYA 195
           +    L + A AK    K  GRIIN+ S   L     +  Y+A K  +   TK++A E A
Sbjct: 127 VRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPMPDELAYAATKGAIEAFTKSLAPELA 186

Query: 196 SRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGY 255
            + I VNA+ PG   +D T  + E+L+  ++ K P GR G+P + A L+ FL    A  +
Sbjct: 187 EKGITVNAVNPG--PTD-TGWITEELKHHLVPKFPQGRVGEPVDAARLIAFLVSEEAK-W 242

Query: 256 ITGQVLTIDGG 266
           ITGQV+  +GG
Sbjct: 243 ITGQVIHSEGG 253

Length = 256

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score =  115 bits (291), Expect = 4e-31
 Identities = 77/259 (29%), Positives = 120/259 (46%), Gaps = 23/259 (8%)

Query: 25  EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGD 84
           +  VA++TG   G+GRA+       G KV V   RS+++  E+  +    G   +   GD
Sbjct: 3   KGEVALITGGGSGLGRALVERFVAEGAKVAV-LDRSAEKVAELRADF---GDAVVGVEGD 58

Query: 85  VSKEADVESMIKTAVDAWGTVDILINNAGI------TRDTLLMRMKKSQWQDVIDLNLTG 138
           V   AD E  +   V+ +G +D  I NAGI        D    ++ ++ + ++  +N+ G
Sbjct: 59  VRSLADNERAVARCVERFGKLDCFIGNAGIWDYSTSLVDIPEEKLDEA-FDELFHINVKG 117

Query: 139 VFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRN 198
             L  +AA    +   +G +I   S  G     G   Y+A+K  V+GL K +A E A   
Sbjct: 118 YILGAKAALP-ALYATEGSVIFTVSNAGFYPGGGGPLYTASKHAVVGLVKQLAYELAPH- 175

Query: 199 INVNAIAPGFIASDMT--AKLGEDLEKK----ILEKI----PLGRYGQPEEVAGLVEFLA 248
           I VN +APG + +D+   A LG+         + + +    PLG   +PE+  G   FLA
Sbjct: 176 IRVNGVAPGGMVTDLRGPASLGQGETSISTPPLDDMLKSILPLGFAPEPEDYTGAYVFLA 235

Query: 249 LNPAAGYITGQVLTIDGGM 267
                   TG V+  DGGM
Sbjct: 236 SRGDNRPATGTVINYDGGM 254

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score =  114 bits (287), Expect = 5e-31
 Identities = 71/224 (31%), Positives = 108/224 (48%), Gaps = 15/224 (6%)

Query: 29  AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKE 88
           A+VTGASRGIG A A  L   G +V +     +++   +           L   GDV  E
Sbjct: 3   ALVTGASRGIGEATARLLHAEGYRVGI----CARDEARLAAAAAQELEGVLGLAGDVRDE 58

Query: 89  ADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAK 148
           ADV   +    +A+G +D L+NNAG+     +  +   +W+ V+D NLTG F C   AA 
Sbjct: 59  ADVRRAVDAMEEAFGGLDALVNNAGVGVMKPVEELTPEEWRLVLDTNLTGAFYCIHKAAP 118

Query: 149 IMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGF 208
            ++++  G I+N+ S+ G     G A Y+A+K G++GL++    +    NI V  + PG 
Sbjct: 119 ALLRRGGGTIVNVGSLAGKNAFKGGAAYNASKFGLLGLSEAAMLDLREANIRVVNVMPGS 178

Query: 209 IASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPA 252
           + +   A   E    K+           PE+VA  V F    PA
Sbjct: 179 VDTGF-AGSPEGQAWKL----------APEDVAQAVLFALEMPA 211

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|131732 TIGR02685, pter_reduc_Leis, pteridine reductase

 Score =  115 bits (288), Expect = 9e-31
 Identities = 83/267 (31%), Positives = 135/267 (50%), Gaps = 26/267 (9%)

Query: 26  APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS-GGQALTFGGD 84
           AP AVVTGA++ IG ++A +L + G +V+++Y RS+  A  +  E+ A     A+T   D
Sbjct: 1   APAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQAD 60

Query: 85  VSKEADV----ESMIKTAVDAWGTVDILINNAGITRDTLLMRM--------KKS---QWQ 129
           +S  A +    E++I     A+G  D+L+NNA     T L+R         KKS   Q  
Sbjct: 61  LSNSATLFSRCEAIIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVA 120

Query: 130 DVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNI------GQANYSAAKAGV 183
           ++   N    +   +A A+     +  +     S+V L   +      G   Y+ AK  +
Sbjct: 121 ELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDAMTDQPLLGFTMYTMAKHAL 180

Query: 184 IGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLG-RYGQPEEVAG 242
            GLT++ A E A   I VN +APG   S +   +  ++++    K+PLG R    E++A 
Sbjct: 181 EGLTRSAALELAPLQIRVNGVAPGL--SLLPDAMPFEVQEDYRRKVPLGQREASAEQIAD 238

Query: 243 LVEFLALNPAAGYITGQVLTIDGGMVM 269
           +V FL ++P A YITG  + +DGG+ +
Sbjct: 239 VVIFL-VSPKAKYITGTCIKVDGGLSL 264

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. Length = 267

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score =  114 bits (288), Expect = 1e-30
 Identities = 80/257 (31%), Positives = 120/257 (46%), Gaps = 16/257 (6%)

Query: 24  VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS--GGQALTF 81
           +E  VAVVTG S GIG A    L +AG  V +   R  +        +     G + L  
Sbjct: 6   LEGRVAVVTGGSSGIGLATVELLLEAGASVAI-CGRDEERLASAEARLREKFPGARLLAA 64

Query: 82  GGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFL 141
             DV  EADV +        +G VD+L+NNAG  R +         W+D ++L    V  
Sbjct: 65  RCDVLDEADVAAFAAAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVIN 124

Query: 142 CTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINV 201
            T+A   ++       I+ + S++ L         SAA+AG++ L K++A E A + + V
Sbjct: 125 PTRAFLPLLRASAAASIVCVNSLLALQPEPHMVATSAARAGLLNLVKSLATELAPKGVRV 184

Query: 202 NAIAPGFIAS-------DMTAKLGEDLEK---KILEK--IPLGRYGQPEEVAGLVEFLAL 249
           N+I  G + S       +  A  G+  E     +  K  IPLGR G+P+E A  + FLA 
Sbjct: 185 NSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPLGRLGRPDEAARALFFLA- 243

Query: 250 NPAAGYITGQVLTIDGG 266
           +P + Y TG  + + GG
Sbjct: 244 SPLSSYTTGSHIDVSGG 260

Length = 265

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score =  115 bits (290), Expect = 2e-30
 Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 1/164 (0%)

Query: 24  VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGG 83
           +   V V+TGAS G+GRA A +  + G KV++  AR  +  E +  EI A+GG+AL    
Sbjct: 6   IGRQVVVITGASAGVGRATARAFARRGAKVVL-LARGEEGLEALAAEIRAAGGEALAVVA 64

Query: 84  DVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCT 143
           DV+    V++    A +  G +D  +NNA +T       +   +++ V ++   GV   T
Sbjct: 65  DVADAEAVQAAADRAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGT 124

Query: 144 QAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLT 187
            AA + M  + +G II + S +       Q+ Y AAK  + G T
Sbjct: 125 LAALRHMRPRDRGAIIQVGSALAYRSIPLQSAYCAAKHAIRGFT 168

Length = 334

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score =  110 bits (276), Expect = 5e-29
 Identities = 68/245 (27%), Positives = 119/245 (48%), Gaps = 13/245 (5%)

Query: 29  AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKE 88
           A++TG + GIG   A      G +V +   R     E    E+   G  AL    D    
Sbjct: 9   ALITGGTSGIGLETARQFLAEGARVAIT-GRDPASLEAARAEL---GESALVIRADAGDV 64

Query: 89  ADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAK 148
           A  +++ +   +A+G +D +  NAG+ +   L    ++ +    + N+ G +   QA   
Sbjct: 65  AAQKALAQALAEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLP 124

Query: 149 IMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGF 208
           ++       I+   S+   +G    + Y+A+KA ++ L KT++ E   R I VNA++PG 
Sbjct: 125 LL--ANPASIVLNGSINAHIGMPNSSVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGP 182

Query: 209 IASDMTAKLG------EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLT 262
           + + +  KLG      + +  +I   +PLGR+G PEE+A  V +LA +  + +I G  + 
Sbjct: 183 VQTPLYGKLGLPEATLDAVAAQIQALVPLGRFGTPEEIAKAVLYLA-SDESAFIVGSEII 241

Query: 263 IDGGM 267
           +DGGM
Sbjct: 242 VDGGM 246

Length = 249

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score =  115 bits (289), Expect = 6e-29
 Identities = 66/235 (28%), Positives = 101/235 (42%), Gaps = 36/235 (15%)

Query: 24  VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGG 83
           +   V ++TGAS GIGRA A  + +AG  V +  AR+ +  +E+  EI A GG A  +  
Sbjct: 369 LVGKVVLITGASSGIGRATAIKVAEAGATVFL-VARNGEALDELVAEIRAKGGTAHAYTC 427

Query: 84  DVSKEADVESMIKTAVDAWGTVDILINNAG--ITRDTLLMRMKKSQWQDVIDLNLTGVFL 141
           D++  A V+  +K  +   G VD L+NNAG  I R       +   ++  + +N  G   
Sbjct: 428 DLTDSAAVDHTVKDILAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVR 487

Query: 142 CTQAAAKIMMKKKKGRIINIASVVGLVGNIG-QAN------YSAAKAGVIGLTKTVAKEY 194
                   M +++ G ++N++S       IG Q N      Y A+KA +   +   A E 
Sbjct: 488 LILGLLPHMRERRFGHVVNVSS-------IGVQTNAPRFSAYVASKAALDAFSDVAASET 540

Query: 195 ASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQ-----PEEVAGLV 244
            S  I    I    + + M A              P  RY       PEE A +V
Sbjct: 541 LSDGITFTTIHMPLVRTPMIA--------------PTKRYNNVPTISPEEAADMV 581

Length = 657

>gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional

 Score =  109 bits (274), Expect = 6e-29
 Identities = 76/239 (31%), Positives = 121/239 (50%), Gaps = 14/239 (5%)

Query: 29  AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKE 88
            +V G SRGIG A+       G  V   YA S   AE + +E  A+  Q           
Sbjct: 9   VLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQT--------DS 60

Query: 89  ADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAK 148
           AD +++I   V   G +DIL+ NAGI      + +       +  +N+   +  +  AA+
Sbjct: 61  ADRDAVIDV-VRKSGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAAR 119

Query: 149 IMMKKKKGRIINIASVVG-LVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
            M   + GRII I SV G  +   G A Y+A+K+ + G+ + +A+++  R I +N + PG
Sbjct: 120 QM--PEGGRIIIIGSVNGDRMPVAGMAAYAASKSALQGMARGLARDFGPRGITINVVQPG 177

Query: 208 FIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGG 266
            I +D     G  ++  +   + + R+G+PEEVAG+V +LA  P A ++TG + TIDG 
Sbjct: 178 PIDTDANPANGP-MKDMMHSFMAIKRHGRPEEVAGMVAWLA-GPEASFVTGAMHTIDGA 234

Length = 237

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score =  109 bits (274), Expect = 8e-29
 Identities = 62/188 (32%), Positives = 95/188 (50%), Gaps = 1/188 (0%)

Query: 29  AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKE 88
            ++TGAS GIGRA+A    KAG  V +  AR +   +E+  E+            DV+ E
Sbjct: 1   VLITGASSGIGRALAREFAKAGYNVALA-ARRTDRLDELKAELLNPNPSVEVEILDVTDE 59

Query: 89  ADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAK 148
              + +I       G +D++I NAG+ + T L  +    +++ ID NL G     +AA  
Sbjct: 60  ERNQLVIAELEAELGGLDLVIINAGVGKGTSLGDLSFKAFRETIDTNLLGAAAILEAALP 119

Query: 149 IMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGF 208
               K +G ++ I+SV  L G  G A YSA+KA +  L +++  +   R I V  I PGF
Sbjct: 120 QFRAKGRGHLVLISSVAALRGLPGAAAYSASKAALSSLAESLRYDVKKRGIRVTVINPGF 179

Query: 209 IASDMTAK 216
           I + +TA 
Sbjct: 180 IDTPLTAN 187

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score =  109 bits (274), Expect = 9e-29
 Identities = 68/232 (29%), Positives = 113/232 (48%), Gaps = 11/232 (4%)

Query: 27  PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS-GGQALTFGGDV 85
              ++TGAS GIG A A    KAG K+++   R ++  +E+  E+ A    + L    DV
Sbjct: 1   KTVLITGASSGIGEATARRFAKAGAKLILT-GRRAERLQELADELGAKFPVKVLPLQLDV 59

Query: 86  SKEADVESMIKTAVDAWGTVDILINNAGITRDT-LLMRMKKSQWQDVIDLNLTGVFLCTQ 144
           S    +E+ ++   + +  +DIL+NNAG+              W+ +ID N+ G+   T+
Sbjct: 60  SDRESIEAALENLPEEFRDIDILVNNAGLALGLDPAQEADLEDWETMIDTNVKGLLNVTR 119

Query: 145 AAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAI 204
               IM+ + +G IIN+ S+ G     G   Y A KA V   +  + K+     I V  I
Sbjct: 120 LILPIMIARNQGHIINLGSIAGRYPYAGGNVYCATKAAVRQFSLNLRKDLIGTGIRVTNI 179

Query: 205 APGFIASDMT-AKLGEDLEK--KILEKI-PLGRYGQPEEVAGLVEFLALNPA 252
            PG + ++ +  +   D EK  K+ E + PL     PE++A  + ++A  PA
Sbjct: 180 EPGLVETEFSLVRFHGDKEKADKVYEGVEPL----TPEDIAETILWVASRPA 227

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score =  114 bits (286), Expect = 1e-28
 Identities = 79/259 (30%), Positives = 121/259 (46%), Gaps = 21/259 (8%)

Query: 28  VAVVTGASRGIGRAVATSL-GKAGCKVLV--NYARSSKEAEEVCKEIEASGGQALTFGGD 84
           VA VTG + GIGR  A  L  +    VL   N   +   A E+  +  A    AL    D
Sbjct: 416 VAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKM--D 473

Query: 85  VSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQ 144
           V+ E  V++       A+G VDI++NNAGI   +        +WQ  +D+  TG FL  +
Sbjct: 474 VTDEQAVKAAFADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAR 533

Query: 145 AAAKIMMKKK-KGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNA 203
            A + M ++   G I+ IAS   +      + YSAAKA    L + +A E  +  I VN 
Sbjct: 534 EAFRQMREQGLGGNIVFIASKNAVYAGKNASAYSAAKAAEAHLARCLAAEGGTYGIRVNT 593

Query: 204 IAPGFI--ASDM---------TAKLG---EDLEKKILEKIPLGRYGQPEEVAGLVEFLAL 249
           + P  +   S +          A  G   ++LE+   ++  L R+  P ++A  V FLA 
Sbjct: 594 VNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLLKRHIFPADIAEAVFFLAS 653

Query: 250 NPAAGYITGQVLTIDGGMV 268
           + +    TG ++T+DGG+ 
Sbjct: 654 SKSE-KTTGCIITVDGGVP 671

Length = 676

>gnl|CDD|181188 PRK07985, PRK07985, oxidoreductase; Provisional

 Score =  110 bits (276), Expect = 1e-28
 Identities = 75/242 (30%), Positives = 126/242 (52%), Gaps = 7/242 (2%)

Query: 29  AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKE-AEEVCKEIEASGGQALTFGGDVSK 87
           A+VTG   GIGRA A +  + G  V ++Y    +E A++V K IE  G +A+   GD+S 
Sbjct: 52  ALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSD 111

Query: 88  EADVESMIKTAVDAWGTVDILINNAGI-TRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
           E    S++  A  A G +DI+   AG       +  +   Q+Q    +N+  +F  TQ A
Sbjct: 112 EKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEA 171

Query: 147 AKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
             I +  K   II  +S+     +    +Y+A KA ++  ++ +AK+ A + I VN +AP
Sbjct: 172 --IPLLPKGASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAP 229

Query: 207 GFIASDMTAKLGEDLEK--KILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTID 264
           G I + +    G+  +K  +  ++ P+ R GQP E+A +  +LA +  + Y+T +V  + 
Sbjct: 230 GPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLA-SQESSYVTAEVHGVC 288

Query: 265 GG 266
           GG
Sbjct: 289 GG 290

Length = 294

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score =  113 bits (284), Expect = 2e-28
 Identities = 58/188 (30%), Positives = 93/188 (49%), Gaps = 2/188 (1%)

Query: 29  AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKE 88
            VVTGA  GIGR  A +  + G +V+ +       AE   + I A+G  A  +  DVS  
Sbjct: 318 VVVTGAGSGIGRETALAFAREGAEVVAS-DIDEAAAERTAELIRAAGAVAHAYRVDVSDA 376

Query: 89  ADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAK 148
             +E+  +      G  DI++NNAGI      +      W  V+D+NL GV    +   +
Sbjct: 377 DAMEAFAEWVRAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGR 436

Query: 149 IMMKKKK-GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
            M+++   G I+N+AS      +     Y+ +KA V+ L++ +  E A+  I V AI PG
Sbjct: 437 QMVERGTGGHIVNVASAAAYAPSRSLPAYATSKAAVLMLSECLRAELAAAGIGVTAICPG 496

Query: 208 FIASDMTA 215
           F+ +++ A
Sbjct: 497 FVDTNIVA 504

Length = 582

>gnl|CDD|168204 PRK05717, PRK05717, oxidoreductase; Validated

 Score =  108 bits (271), Expect = 2e-28
 Identities = 84/246 (34%), Positives = 128/246 (52%), Gaps = 16/246 (6%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVL---VNYARSSKEAEEVCKEIEASGGQALTFGGD 84
           VA+VTGA+RGIG  +A  L   G +V+   ++  R SK A       +A G  A     D
Sbjct: 12  VALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVA-------KALGENAWFIAMD 64

Query: 85  VSKEADVESMIKTAVDAWGTVDILINNAGIT--RDTLLMRMKKSQWQDVIDLNLTGVFLC 142
           V+ EA V + +   +  +G +D L+ NA I    +T L  +  + W  V+ +NLTG  L 
Sbjct: 65  VADEAQVAAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLL 124

Query: 143 TQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
            +  A   ++   G I+N+AS            Y+A+K G++ LT  +A       I VN
Sbjct: 125 AKHCAP-YLRAHNGAIVNLASTRARQSEPDTEAYAASKGGLLALTHALAISLGP-EIRVN 182

Query: 203 AIAPGFI-ASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL 261
           A++PG+I A D + +  E L +    + P GR G  E+VA +V +L L+  AG++TGQ  
Sbjct: 183 AVSPGWIDARDPSQRRAEPLSEADHAQHPAGRVGTVEDVAAMVAWL-LSRQAGFVTGQEF 241

Query: 262 TIDGGM 267
            +DGGM
Sbjct: 242 VVDGGM 247

Length = 255

>gnl|CDD|169389 PRK08339, PRK08339, short chain dehydrogenase; Provisional

 Score =  107 bits (268), Expect = 8e-28
 Identities = 81/253 (32%), Positives = 123/253 (48%), Gaps = 19/253 (7%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEI-EASGGQALTFGGDVS 86
           +A  T +S+GIG  VA  L +AG  V++  +R+ +  ++  ++I   S         D++
Sbjct: 10  LAFTTASSKGIGFGVARVLARAGADVIL-LSRNEENLKKAREKIKSESNVDVSYIVADLT 68

Query: 87  KEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
           K  D+E  +K   +  G  DI   + G  +    M M    W+  + L L      T+A 
Sbjct: 69  KREDLERTVKELKNI-GEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRAL 127

Query: 147 AKIMMKKKKGRIINIASVV--GLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAI 204
              M +K  GRII   SV     + NI  +N    +  + GL +T+AKE   + I VN I
Sbjct: 128 VPAMERKGFGRIIYSTSVAIKEPIPNIALSN--VVRISMAGLVRTLAKELGPKGITVNGI 185

Query: 205 APGFIASDMTAKLGEDL---EKKILEK--------IPLGRYGQPEEVAGLVEFLALNPAA 253
            PG I +D   +L +D    E K +E+        IPLGR G+PEE+  LV FLA +   
Sbjct: 186 MPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEPEEIGYLVAFLA-SDLG 244

Query: 254 GYITGQVLTIDGG 266
            YI G ++ +DGG
Sbjct: 245 SYINGAMIPVDGG 257

Length = 263

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score =  106 bits (267), Expect = 2e-27
 Identities = 69/235 (29%), Positives = 110/235 (46%), Gaps = 32/235 (13%)

Query: 27  PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGG-DV 85
            VA+VTGAS GIGRA A  L +AG +V   +  S   A        A+    +     DV
Sbjct: 5   KVALVTGASSGIGRATAEKLARAGYRV---FGTSRNPA-------RAAPIPGVELLELDV 54

Query: 86  SKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKS---QWQDVIDLNLTGVFLC 142
           + +A V++ +   +   G +D+L+NNAG+    L    ++S   Q Q + D N+ G+   
Sbjct: 55  TDDASVQAAVDEVIARAGRIDVLVNNAGV---GLAGAAEESSIAQAQALFDTNVFGILRM 111

Query: 143 TQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
           T+A    M  +  GRIINI+SV+G +     A Y+A+K  V G ++++  E     I V+
Sbjct: 112 TRAVLPHMRAQGSGRIINISSVLGFLPAPYMALYAASKHAVEGYSESLDHEVRQFGIRVS 171

Query: 203 AIAPGFI-------ASDMTAKLGE------DLEKKILEKIPLGRYGQPEEVAGLV 244
            + P +        A +  + L E       + K + + +       PE VA  V
Sbjct: 172 LVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVAKAVKKAD--APEVVADTV 224

Length = 270

>gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional

 Score =  105 bits (264), Expect = 4e-27
 Identities = 74/243 (30%), Positives = 117/243 (48%), Gaps = 9/243 (3%)

Query: 30  VVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS--GGQALTFGGDVSK 87
           +VTG   GIG+ VA  L  AG  V++   R+  +     +EIEA    G       DV+ 
Sbjct: 11  LVTGGGSGIGKGVAAGLVAAGAAVMI-VGRNPDKLAAAAEEIEALKGAGAVRYEPADVTD 69

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTL--LMRMKKSQWQDVIDLNLTGVFLCTQA 145
           E  V   +  A    G +  +++ AG   +T+  + ++    W+  +DLN+ G     + 
Sbjct: 70  EDQVARAVDAATAWHGRLHGVVHCAG-GSETIGPITQIDSDAWRRTVDLNVNGTMYVLKH 128

Query: 146 AAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIA 205
           AA+ +++   G  + I+S+     +     Y   K+ V  L K  A E     + VN+I 
Sbjct: 129 AARELVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIR 188

Query: 206 PGFIASDMTAKL--GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTI 263
           PG I +D+ A +    +L        PL R G+ E+VA L  FL L+ AA +ITGQV+ +
Sbjct: 189 PGLIRTDLVAPITESPELSADYRACTPLPRVGEVEDVANLAMFL-LSDAASWITGQVINV 247

Query: 264 DGG 266
           DGG
Sbjct: 248 DGG 250

Length = 276

>gnl|CDD|181417 PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydrogenase; Provisional

 Score =  103 bits (258), Expect = 2e-26
 Identities = 73/246 (29%), Positives = 123/246 (50%), Gaps = 10/246 (4%)

Query: 30  VVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGG-QALTFGGDVSKE 88
           V++G +RGIG+A+     ++G  +   Y  + +EA ++ +++E   G +A  +  ++ + 
Sbjct: 12  VISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEP 71

Query: 89  ADVESMIKTAVDAWGTVDILINNAGITRD------TLLMRMKKSQWQDVIDLNLTGVFLC 142
              + + K   + +  VD  I+NA I+        T  MR+K     ++    +    + 
Sbjct: 72  ETYKELFKKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVG 131

Query: 143 TQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
            Q AAK M K   G II+++S   LV     A +  +KA V  + K  A E   +NI VN
Sbjct: 132 AQEAAKRMEKVGGGSIISLSSTGNLVYIENYAGHGTSKAAVETMVKYAATELGEKNIRVN 191

Query: 203 AIAPGFIASDMTAKLG--EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQV 260
           A++ G I +D        E+++ K  E  PL R GQPE++AG   FL     A ++TGQ 
Sbjct: 192 AVSGGPIDTDALKAFTNYEEVKAKTEELSPLNRMGQPEDLAGACLFLCSE-KASWLTGQT 250

Query: 261 LTIDGG 266
           + +DGG
Sbjct: 251 IVVDGG 256

Length = 260

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score =  102 bits (257), Expect = 4e-26
 Identities = 66/256 (25%), Positives = 119/256 (46%), Gaps = 25/256 (9%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVL---VNYARSSKEAEEVCKEIEASGGQALTFG-G 83
             ++TGA   IG A+  ++ +AG  V+   ++    ++  E + KE ++     L+    
Sbjct: 6   TILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSK---KLSLVEL 62

Query: 84  DVSKEADVESMIKTAVDAWGTVDILINNA---GITRDTLLMRMKKSQWQDVIDLNLTGVF 140
           D++ +  +E  +  + + +G +D  +N A             +    + + + L+L   F
Sbjct: 63  DITDQESLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSF 122

Query: 141 LCTQAAAKIMMKKKKGRIINIASVVGLVGN----------IGQANYSAAKAGVIGLTKTV 190
           L +Q  AK   K+  G ++NI+S+ G+V                 Y+A KAG+I LTK +
Sbjct: 123 LFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGTSMTSPVEYAAIKAGIIHLTKYL 182

Query: 191 AKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALN 250
           AK +   NI VN ++PG I  +         +K    K  L     P+++ G + FL L+
Sbjct: 183 AKYFKDSNIRVNCVSPGGILDNQPEAFLNAYKKCCNGKGML----DPDDICGTLVFL-LS 237

Query: 251 PAAGYITGQVLTIDGG 266
             + YITGQ + +D G
Sbjct: 238 DQSKYITGQNIIVDDG 253

Length = 256

>gnl|CDD|187619 cd05361, haloalcohol_DH_SDR_c-like, haloalcohol dehalogenase, classical (c) SDRs

 Score =  101 bits (254), Expect = 5e-26
 Identities = 74/250 (29%), Positives = 113/250 (45%), Gaps = 14/250 (5%)

Query: 26  APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDV 85
             +A+VT A    G A A +L + G  V+ + A  +  AE    E E  G +AL+     
Sbjct: 1   MSIALVTHARHFAGPASAEALTEDGYTVVCHDASFADAAERQAFESENPGTKALS----- 55

Query: 86  SKEADVESMIKTAVDAWGTVDILINNAGITRD-TLLMRMKKSQWQDVIDLNLTGVFLCTQ 144
             E   E ++   + A G +D+L++N  I R    +    ++  +   +      F   Q
Sbjct: 56  --EQKPEELVDAVLQAGGAIDVLVSNDYIPRPMNPIDGTSEADIRQAFEALSIFPFALLQ 113

Query: 145 AAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAI 204
           AA   M K   G II I S V        + Y  A+A  + L +++AKE +  NI V AI
Sbjct: 114 AAIAQMKKAGGGSIIFITSAVPKKPLAYNSLYGPARAAAVALAESLAKELSRDNILVYAI 173

Query: 205 APGFIASDM-----TAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQ 259
            P F  S         +   +L +++   +PLGR G+P+E+  LV FLA +  A  ITGQ
Sbjct: 174 GPNFFNSPTYFPTSDWENNPELRERVKRDVPLGRLGRPDEMGALVAFLA-SRRADPITGQ 232

Query: 260 VLTIDGGMVM 269
                GG + 
Sbjct: 233 FFAFAGGYLP 242

Dehalogenases cleave carbon-halogen bonds. Haloalcohol dehalogenase show low sequence similarity to short-chain dehydrogenases/reductases (SDRs). Like the SDRs, haloalcohol dehalogenases have a conserved catalytic triad (Ser-Tyr-Lys/Arg), and form a Rossmann fold. However, the normal classical SDR NAD(P)-binding motif (TGXXGXG) and NAD-binding function is replaced with a halide binding site, allowing the enzyme to catalyze a dehalogenation reaction. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional

 Score =  102 bits (255), Expect = 6e-26
 Identities = 74/253 (29%), Positives = 123/253 (48%), Gaps = 18/253 (7%)

Query: 30  VVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEA 89
           +VT +SRGIG  VA  L K G +V+++ +R+ +  E+  KE+    G+      D+S + 
Sbjct: 4   LVTASSRGIGFNVARELLKKGARVVIS-SRNEENLEKALKEL-KEYGEVYAVKADLSDKD 61

Query: 90  DVESMIKTAVDAWGTVDILINNAGITR--DTLLMRMKKSQWQDVIDLNLTGV-FLCTQAA 146
           D+++++K A +  G +D L+ NAG  R    +L     S W +   L+L    +L T   
Sbjct: 62  DLKNLVKEAWELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLI 121

Query: 147 AKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAI-- 204
              + KK KG ++ ++SV               +AG++ L K V++ Y  + I    +  
Sbjct: 122 QAWLEKKMKGVLVYLSSVSVKEPMPPLVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLL 181

Query: 205 ----APGF------IASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAG 254
                PG       IA +      E  E+++LE+ PL R G+ EE+  L+ FL L+  A 
Sbjct: 182 GSFDTPGARENLARIAEERGVSFEETWEREVLERTPLKRTGRWEELGSLIAFL-LSENAE 240

Query: 255 YITGQVLTIDGGM 267
           Y+ G  +  DG M
Sbjct: 241 YMLGSTIVFDGAM 253

Length = 259

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 99.7 bits (249), Expect = 3e-25
 Identities = 69/233 (29%), Positives = 106/233 (45%), Gaps = 33/233 (14%)

Query: 29  AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK- 87
            ++TGASRGIG  +   L   G   ++   R    A E+          AL         
Sbjct: 1   VLITGASRGIGLELVRQLLARGNNTVIATCRDPSAATEL---------AALGASHSRLHI 51

Query: 88  -EADVESMIKTAVDAWGT------VDILINNAGI-TRDTLLMRMKKSQWQDVIDLNLTGV 139
            E DV   I  + +A         +D+LINNAGI         +      +V  +N+ G 
Sbjct: 52  LELDVTDEIAESAEAVAERLGDAGLDVLINNAGILHSYGPASEVDSEDLLEVFQVNVLGP 111

Query: 140 FLCTQAAAKIMMKKKKGRIINIASVVGLVGNI---GQANYSAAKAGVIGLTKTVAKEYAS 196
            L TQA   +++K  + +IINI+S VG +G+    G  +Y A+KA +  LTK++A E   
Sbjct: 112 LLLTQAFLPLLLKGARAKIINISSRVGSIGDNTSGGWYSYRASKAALNMLTKSLAVELKR 171

Query: 197 RNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEE-VAGLVEFLA 248
             I V ++ PG++ +DM     +        K P+     PEE VAGL++ + 
Sbjct: 172 DGITVVSLHPGWVRTDMGGPFAK-------NKGPI----TPEESVAGLLKVID 213

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 99.6 bits (248), Expect = 3e-25
 Identities = 61/238 (25%), Positives = 106/238 (44%), Gaps = 14/238 (5%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGG---QALTFGGD 84
           + +VTGAS GIGR  A +  + G  V++   R+ ++  +V   I   GG   Q       
Sbjct: 6   IILVTGASDGIGREAALTYARYGATVIL-LGRNEEKLRQVADHINEEGGRQPQWFILDLL 64

Query: 85  VSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQ-WQDVIDLNLTGVFLCT 143
                + + + +     +  +D +++NAG+  D   +  +  Q WQDV  +N+   F+ T
Sbjct: 65  TCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPLSEQNPQVWQDVXQVNVNATFMLT 124

Query: 144 QAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNA 203
           QA   +++K   G ++  +S VG  G      Y+ +K    GL + +A EY  RN+ VN 
Sbjct: 125 QALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAVSKFATEGLXQVLADEYQQRNLRVNC 184

Query: 204 IAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL 261
           I PG   + M A      + + L+         P ++  L  +L +   +   TG   
Sbjct: 185 INPGGTRTAMRASAFPTEDPQKLKT--------PADIMPLYLWL-MGDDSRRKTGMTF 233

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional

 Score = 99.6 bits (249), Expect = 7e-25
 Identities = 61/192 (31%), Positives = 92/192 (47%), Gaps = 20/192 (10%)

Query: 29  AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAE----------EVCKEIEASGGQA 78
             +TGASRGIG A+A    + G     N   ++K AE             +EIEA+GGQA
Sbjct: 9   LFITGASRGIGLAIALRAARDGA----NIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQA 64

Query: 79  LTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGI--TRDTLLMRMKKSQWQDVIDLNL 136
           L   GDV  E  V + +  AV+ +G +DI +NNA       T    MK+  +  +  +N+
Sbjct: 65  LPLVGDVRDEDQVAAAVAKAVERFGGIDICVNNASAINLTGTEDTPMKR--FDLMQQINV 122

Query: 137 TGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNI--GQANYSAAKAGVIGLTKTVAKEY 194
            G FL +QA    + K +   I+ ++  + L          Y+ AK G+   T  +A+E+
Sbjct: 123 RGTFLVSQACLPHLKKSENPHILTLSPPLNLDPKWFAPHTAYTMAKYGMSLCTLGLAEEF 182

Query: 195 ASRNINVNAIAP 206
               I VNA+ P
Sbjct: 183 RDDGIAVNALWP 194

Length = 273

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 97.8 bits (244), Expect = 3e-24
 Identities = 56/182 (30%), Positives = 98/182 (53%), Gaps = 4/182 (2%)

Query: 31  VTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEAD 90
           +TGASRG GRA   +  + G +V V  AR +    ++ ++    G + L    DV+  A 
Sbjct: 8   ITGASRGFGRAWTEAALERGDRV-VATARDTATLADLAEKY---GDRLLPLALDVTDRAA 63

Query: 91  VESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIM 150
           V + ++TAV+ +G +DI++NNAG     ++  + +S+ +  ID N  G    TQA    +
Sbjct: 64  VFAAVETAVEHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYL 123

Query: 151 MKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIA 210
            +++ G II I+S+ G+        Y A+K  + G+++ +A+E A   I V  + PG  +
Sbjct: 124 REQRSGHIIQISSIGGISAFPMSGIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYS 183

Query: 211 SD 212
           +D
Sbjct: 184 TD 185

Length = 275

>gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10

 Score = 97.1 bits (242), Expect = 3e-24
 Identities = 48/175 (27%), Positives = 82/175 (46%), Gaps = 2/175 (1%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVC-KEIEASGGQALTFGGDVS 86
           VA V GA  G+G A+A      G  V +  AR   + E +    I  +GG A     D  
Sbjct: 1   VAAVVGAGDGLGAAIARRFAAEGFSVAL-AARREAKLEALLVDIIRDAGGSAKAVPTDAR 59

Query: 87  KEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
            E +V ++     +  G +++L+ NAG      ++      ++ V ++   G FL  + A
Sbjct: 60  DEDEVIALFDLIEEEIGPLEVLVYNAGANVWFPILETTPRVFEKVWEMAAFGGFLAAREA 119

Query: 147 AKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINV 201
           AK M+ + +G II   +   L G  G A ++ AK  +  L +++A+E   + I+V
Sbjct: 120 AKRMLARGRGTIIFTGATASLRGRAGFAAFAGAKFALRALAQSMARELGPKGIHV 174

This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238

>gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional

 Score = 96.9 bits (242), Expect = 6e-24
 Identities = 60/195 (30%), Positives = 94/195 (48%), Gaps = 11/195 (5%)

Query: 26  APVAVVTGASRGIGRAVATSLGKAGCKV-LVNYARSSKEAEEVCKEIEASGGQALTFGGD 84
                +TGAS GIG+A+A    + G  + LV  AR +   +     +     +   +  D
Sbjct: 2   PLKVFITGASSGIGQALAREYARQGATLGLV--ARRTDALQAFAARLPK-AARVSVYAAD 58

Query: 85  VSKEADVESMIKTAVD---AWGTVDILINNAGITRDTLL-MRMKKSQWQDVIDLNLTGVF 140
           V    D +++   A D   A G  D++I NAGI+  TL   R   + +++V+D N  G+ 
Sbjct: 59  V---RDADALAAAAADFIAAHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMV 115

Query: 141 LCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNIN 200
              Q     M   ++G ++ IASV G+ G  G   YSA+KA  I   +++  E     + 
Sbjct: 116 ATFQPFIAPMRAARRGTLVGIASVAGVRGLPGAGAYSASKAAAIKYLESLRVELRPAGVR 175

Query: 201 VNAIAPGFIASDMTA 215
           V  IAPG+I + MTA
Sbjct: 176 VVTIAPGYIRTPMTA 190

Length = 257

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 96.2 bits (240), Expect = 6e-24
 Identities = 59/202 (29%), Positives = 93/202 (46%), Gaps = 12/202 (5%)

Query: 28  VAVVTGASRGIGRAVATSL-GKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFG-GDV 85
           V ++TGASRGIGRA+A  L  +    V+V  ARS  E      + E   G  +T    D+
Sbjct: 1   VIILTGASRGIGRALAEELLKRGSPSVVVLLARS--EEPLQELKEELRPGLRVTTVKADL 58

Query: 86  SKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKS---QWQDVIDLNLTGVFLC 142
           S  A VE +++      G  D+LINNAG      + +++     + Q   DLNLT     
Sbjct: 59  SDAAGVEQLLEAIRKLDGERDLLINNAGSLGP--VSKIEFIDLDELQKYFDLNLTSPVCL 116

Query: 143 TQAAAKIMMK-KKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINV 201
           T    +   K   K  ++N++S   +    G   Y ++KA      + +A E    ++ V
Sbjct: 117 TSTLLRAFKKRGLKKTVVNVSSGAAVNPFKGWGLYCSSKAARDMFFRVLAAEE--PDVRV 174

Query: 202 NAIAPGFIASDMTAKLGEDLEK 223
            + APG + +DM  ++ E    
Sbjct: 175 LSYAPGVVDTDMQREIRETSAD 196

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 96.1 bits (240), Expect = 8e-24
 Identities = 60/196 (30%), Positives = 99/196 (50%), Gaps = 7/196 (3%)

Query: 31  VTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGG-QALTFGGDVS--K 87
           VTGA  GIGR  A +  + G  V++   R+ ++ E V  EIEA+GG Q      D+    
Sbjct: 17  VTGAGDGIGREAALTYARHGATVIL-LGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTAT 75

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQ-WQDVIDLNLTGVFLCTQAA 146
             + + +  T  + +G +D +++NAG+  +   M  +  + WQDV+ +N+   F+ TQA 
Sbjct: 76  PQNYQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQAL 135

Query: 147 AKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
             +++K     ++  +S VG  G      Y+ +K    G+ + +A EY   N+ VN I P
Sbjct: 136 LPLLLKSPAASLVFTSSSVGRQGRANWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINP 195

Query: 207 GFIASDMTAKL--GED 220
           G   + M A    GED
Sbjct: 196 GGTRTAMRASAFPGED 211

Length = 247

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 96.2 bits (240), Expect = 1e-23
 Identities = 58/213 (27%), Positives = 106/213 (49%), Gaps = 10/213 (4%)

Query: 30  VVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEA 89
           ++TGAS GIG+A+A +L  AG ++L+   R++++ E +   +   G +      D++ EA
Sbjct: 9   LLTGASGGIGQALAEALAAAGARLLL-VGRNAEKLEALAARLPYPG-RHRWVVADLTSEA 66

Query: 90  DVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKI 149
             E  +       G +++LINNAG+    LL        + ++ LNLT     T+A   +
Sbjct: 67  GRE-AVLARAREMGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPL 125

Query: 150 MMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFI 209
           +  +    ++N+ S  G +G  G A+Y A+K  + G ++ + +E A   + V  +AP   
Sbjct: 126 LRAQPSAMVVNVGSTFGSIGYPGYASYCASKFALRGFSEALRRELADTGVRVLYLAPRAT 185

Query: 210 ASDMTAKLGEDLEKKILEKIPLG-RYGQPEEVA 241
            + M ++  + L +       LG     PE+VA
Sbjct: 186 RTAMNSEAVQALNRA------LGNAMDDPEDVA 212

Length = 263

>gnl|CDD|132368 TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

 Score = 94.9 bits (236), Expect = 3e-23
 Identities = 79/260 (30%), Positives = 117/260 (45%), Gaps = 21/260 (8%)

Query: 23  NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFG 82
            ++  V +VTG + G+GRA+       G +V V   +S+   +E+     A G   +   
Sbjct: 2   RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAV-LDKSAAGLQELEA---AHGDAVVGVE 57

Query: 83  GDVSKEADVESMIKTAVDAWGTVDILINNAGI-TRDTLLMRMKKSQ----WQDVIDLNLT 137
           GDV    D +  +   V A+G +D LI NAGI    T L+ +   +    + +V  +N+ 
Sbjct: 58  GDVRSLDDHKEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVK 117

Query: 138 GVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASR 197
           G  L  +AA   ++  +   I  I S  G   N G   Y+AAK  V+GL K +A E A  
Sbjct: 118 GYLLAVKAALPALVASRGSVIFTI-SNAGFYPNGGGPLYTAAKHAVVGLVKELAFELAPY 176

Query: 198 NINVNAIAPGFIASDMTAKLGEDLEKKILEKIPL----------GRYGQPEEVAGLVEFL 247
            + VN +APG ++SD+       +  K +  +PL          GR    EE  G   F 
Sbjct: 177 -VRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPIGRMPDAEEYTGAYVFF 235

Query: 248 ALNPAAGYITGQVLTIDGGM 267
           A        TG VL  DGGM
Sbjct: 236 ATRGDTVPATGAVLNYDGGM 255

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. Length = 262

>gnl|CDD|222222 pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase

 Score = 93.0 bits (232), Expect = 1e-22
 Identities = 54/247 (21%), Positives = 103/247 (41%), Gaps = 23/247 (9%)

Query: 33  GASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVE 92
                I  A+A +  + G +V++     +     V +  +      +    DV+ + D++
Sbjct: 3   ADDNSIAWAIAKAAAEEGAEVVLTTWPPALRMGAVDELAKELPADVIPL--DVTSDEDID 60

Query: 93  SMIKTAVDAWGTVDILINNAGITRDTLLMR----MKKSQWQDVIDLNLTGVFLCTQAAAK 148
            + +   +  G +D L+++  ++ +    +      +  +   +D++        +AA  
Sbjct: 61  ELFEKVKEDGGKIDFLVHSIAMSPEIRKGKPYLDTSREGFLKALDISAYSFISLAKAAKP 120

Query: 149 IMMKKKKGRIINIASVVGL--VGNI----GQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
           +M    +G      S+V L  +       G      AKA +  L + +A E   + I VN
Sbjct: 121 LM---NEG-----GSIVALSYIAAERVFPGYGGMGVAKAALESLARYLAYELGRKGIRVN 172

Query: 203 AIAPGFIASDMTAKLG--EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQV 260
            I+ G   +   + +G  + + +   E  PLGR    EEVA    FL L+  A  ITGQ+
Sbjct: 173 TISAGPTKTTAGSGIGGFDKMVEYAEEMAPLGRNASAEEVANAAAFL-LSDLARGITGQI 231

Query: 261 LTIDGGM 267
           L +DGG 
Sbjct: 232 LYVDGGF 238

Length = 239

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score = 93.6 bits (233), Expect = 1e-22
 Identities = 53/181 (29%), Positives = 89/181 (49%), Gaps = 3/181 (1%)

Query: 29  AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQ-ALTFGGDVSK 87
             VTGA+ GIGRA A  L   G ++ +   R +    +   +  A GG        D+S 
Sbjct: 3   CFVTGAASGIGRATALRLAAQGAELFLT-DRDADGLAQTVADARALGGTVPEHRALDISD 61

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
              V +       A G++D+++N AGI+    + R+   QW+ ++D+NL G     +   
Sbjct: 62  YDAVAAFAADIHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFV 121

Query: 148 KIMMKKKKGR-IINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
             M+   +G  ++N++S  GLV     A YSA+K G+ GL++ +  + A   I V+ + P
Sbjct: 122 PPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVP 181

Query: 207 G 207
           G
Sbjct: 182 G 182

Length = 272

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score = 93.1 bits (232), Expect = 1e-22
 Identities = 64/212 (30%), Positives = 95/212 (44%), Gaps = 6/212 (2%)

Query: 31  VTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEAD 90
           +TGA+ GIGRA A      G +V   Y  +      +  E+    G A T   DV+  A 
Sbjct: 6   ITGAASGIGRATALLFAAEGWRVGA-YDINEAGLAALAAELG--AGNAWTGALDVTDRAA 62

Query: 91  VESMIKTAVDAW-GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKI 149
            ++ +     A  G +D+L NNAGI R      +       VID+N+ GV     AA   
Sbjct: 63  WDAALADFAAATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPY 122

Query: 150 MMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFI 209
           +      R+IN +S   + G  G A YSA K  V GLT+ +  E+    I V  + P F+
Sbjct: 123 LKATPGARVINTSSASAIYGQPGLAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFV 182

Query: 210 ASDMTAKLGEDLEKKILEKIPLGRYGQPEEVA 241
            + M      +++    ++  LG    PE+VA
Sbjct: 183 DTAMLDGTSNEVDAGSTKR--LGVRLTPEDVA 212

Length = 260

>gnl|CDD|183716 PRK12744, PRK12744, short chain dehydrogenase; Provisional

 Score = 92.5 bits (230), Expect = 2e-22
 Identities = 67/266 (25%), Positives = 121/266 (45%), Gaps = 33/266 (12%)

Query: 20  AAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLV---NYARSSKEAEEVCKEIEASGG 76
           A  +++  V ++ G ++ +G  +A  L   G K +    N A S  +AEE    ++A+G 
Sbjct: 2   ADHSLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGA 61

Query: 77  QALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNL 136
           +A+ F  D++  A VE +   A  A+G  DI IN  G      ++ + ++++ ++  +N 
Sbjct: 62  KAVAFQADLTTAAAVEKLFDDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNS 121

Query: 137 TGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNI--GQANYSAAKAGVIGLTKTVAKEY 194
              F   + A + +     G+I+ +  V  L+G      + Y+ +KA V   T+  +KE+
Sbjct: 122 KSAFFFIKEAGRHL--NDNGKIVTL--VTSLLGAFTPFYSAYAGSKAPVEHFTRAASKEF 177

Query: 195 ASRNINVNAIAPG--------------FIASDMTAKLGEDLEKKILEKIPLGRYGQPEEV 240
            +R I+V A+ PG               +A   TA       K  L  I        E++
Sbjct: 178 GARGISVTAVGPGPMDTPFFYPQEGAEAVAYHKTAAALSPFSKTGLTDI--------EDI 229

Query: 241 AGLVEFLALNPAAGYITGQVLTIDGG 266
              + FL  +    +ITGQ + I+GG
Sbjct: 230 VPFIRFLVTD--GWWITGQTILINGG 253

Length = 257

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 91.1 bits (227), Expect = 9e-22
 Identities = 50/185 (27%), Positives = 92/185 (49%), Gaps = 4/185 (2%)

Query: 23  NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFG 82
                  ++TG S G GRA+A +   AG +V+    RS     +          +AL   
Sbjct: 1   MSSMKTWLITGVSSGFGRALAQAALAAGHRVVGT-VRSEAARADF---EALHPDRALARL 56

Query: 83  GDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLC 142
            DV+    +++++  A   +G +D+L+NNAG   +  +     ++ +   ++N+ G    
Sbjct: 57  LDVTDFDAIDAVVADAEATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAM 116

Query: 143 TQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
           T+A    M  +++G I+NI S+ GL+   G   Y  +K  + G+++++AKE A   I+V 
Sbjct: 117 TKAVLPGMRARRRGHIVNITSMGGLITMPGIGYYCGSKFALEGISESLAKEVAPFGIHVT 176

Query: 203 AIAPG 207
           A+ PG
Sbjct: 177 AVEPG 181

Length = 277

>gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional

 Score = 91.4 bits (227), Expect = 9e-22
 Identities = 65/235 (27%), Positives = 113/235 (48%), Gaps = 7/235 (2%)

Query: 29  AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKE 88
           A+V GAS GIG A A  L  AG  V +  AR  ++ EE+  +I A GG+A+ F  DV+  
Sbjct: 13  ALVAGASSGIGAATAIELAAAGFPVALG-ARRVEKCEELVDKIRADGGEAVAFPLDVTDP 71

Query: 89  ADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAK 148
             V+S +  A +A G +++L++ AG T    L  +   Q++  + ++L G      A   
Sbjct: 72  DSVKSFVAQAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLP 131

Query: 149 IMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGF 208
            M+++++G +I + S V L        Y AAKAG+  +   +  E     +  + + PG 
Sbjct: 132 GMIERRRGDLIFVGSDVALRQRPHMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGP 191

Query: 209 IASDMTAKLGEDLEKKILE---KIPLGRYG---QPEEVAGLVEFLALNPAAGYIT 257
             + M   L  ++   +LE   K    R+    +  ++A  + F+A  P   ++ 
Sbjct: 192 TLTGMGWSLPAEVIGPMLEDWAKWGQARHDYFLRASDLARAITFVAETPRGAHVV 246

Length = 274

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 90.1 bits (224), Expect = 1e-21
 Identities = 52/205 (25%), Positives = 85/205 (41%), Gaps = 8/205 (3%)

Query: 29  AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKE 88
            ++TG + GIG A+A    +AG  V++   R     EE   E +       T   DV   
Sbjct: 8   VLITGGTSGIGLALARKFLEAGNTVIIT-GRR----EERLAEAKKELPNIHTIVLDVGDA 62

Query: 89  ADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKS--QWQDVIDLNLTGVFLCTQAA 146
             VE++ +  +  +  +DILINNAGI R   L        +    ID NL G     +A 
Sbjct: 63  ESVEALAEALLSEYPNLDILINNAGIQRPIDLRDPASDLDKADTEIDTNLIGPIRLIKAF 122

Query: 147 AKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
              + K+ +  I+N++S +  V       Y A KA +   T  +  +     + V  I P
Sbjct: 123 LPHLKKQPEATIVNVSSGLAFVPMAANPVYCATKAALHSYTLALRHQLKDTGVEVVEIVP 182

Query: 207 GFIASDMTAKLGEDLEKKILEKIPL 231
             + +++  +           K+PL
Sbjct: 183 PAVDTELHEERRNPDGGTPR-KMPL 206

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 89.6 bits (223), Expect = 1e-21
 Identities = 67/239 (28%), Positives = 108/239 (45%), Gaps = 28/239 (11%)

Query: 25  EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGD 84
           E P A++TGASRGIG A+A  L  A    L+   R ++  +E+  E+      A  F  D
Sbjct: 2   ERPTALITGASRGIGAAIAREL--APTHTLLLGGRPAERLDELAAELP----GATPFPVD 55

Query: 85  VSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQ 144
           ++    + +    AV+  G +D+L++NAG+     +      +W+  +++N+      T+
Sbjct: 56  LTDPEAIAA----AVEQLGRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTR 111

Query: 145 A------AAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRN 198
                  AA        G ++ I S  GL  N G  +Y+A+K  +  L   + +E    N
Sbjct: 112 LLLPALRAA-------HGHVVFINSGAGLRANPGWGSYAASKFALRALADALREEEPG-N 163

Query: 199 INVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYIT 257
           + V ++ PG   +DM   L         E  P  RY +PE VA  V F    P   +IT
Sbjct: 164 VRVTSVHPGRTDTDMQRGLVAQEGG---EYDP-ERYLRPETVAKAVRFAVDAPPDAHIT 218

Length = 227

>gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 88.7 bits (220), Expect = 4e-21
 Identities = 61/192 (31%), Positives = 96/192 (50%), Gaps = 24/192 (12%)

Query: 31  VTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAE----------EVCKEIEASGGQALT 80
           +TGASRGIG+A+A    + G  V++    ++K AE             +EIEA+GG+AL 
Sbjct: 8   ITGASRGIGKAIALKAARDGANVVI----AAKTAEPHPKLPGTIYTAAEEIEAAGGKALP 63

Query: 81  FGGDVSKEADVESMIKTAVDAWGTVDILINNAGIT--RDTLLMRMKKSQWQDVIDLNLTG 138
              D+  E  V + ++ AV+ +G +DIL+NNA       TL   MK+      +  N  G
Sbjct: 64  CIVDIRDEDQVRAAVEKAVEKFGGIDILVNNASAISLTGTLDTPMKRYDLMMGV--NTRG 121

Query: 139 VFLCTQAAAKIMMKKKKGRIINIASVVGL----VGNIGQANYSAAKAGVIGLTKTVAKEY 194
            +LC++A    + K K   I+N++  + L      N     Y+ AK G+      +A+E+
Sbjct: 122 TYLCSKACLPYLKKSKNPHILNLSPPLNLNPKWFKN--HTAYTMAKYGMSMCVLGMAEEF 179

Query: 195 ASRNINVNAIAP 206
               I VNA+ P
Sbjct: 180 KPGGIAVNALWP 191

This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score = 88.8 bits (221), Expect = 6e-21
 Identities = 54/212 (25%), Positives = 92/212 (43%), Gaps = 39/212 (18%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKV-LVNYARSSKEAEEVCKEI-EASGGQALTFGGDV 85
           V V+TGA+ GIG+  A  L K G  V +    R+ ++ EE   EI + +G   +      
Sbjct: 3   VVVITGANSGIGKETARELAKRGAHVIIAC--RNEEKGEEAAAEIKKETGNAKVEV---- 56

Query: 86  SKEADVESM--IKTAVDAW----GTVDILINNAGITRDTLLMRMKKSQWQDVIDL----N 135
             + D+ S+  ++   + +      +DILINNAGI      M   +   +D  +L    N
Sbjct: 57  -IQLDLSSLASVRQFAEEFLARFPRLDILINNAGI------MAPPRRLTKDGFELQFAVN 109

Query: 136 LTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQAN--------------YSAAKA 181
             G FL T     ++      RI+N++S+    G I   +              Y  +K 
Sbjct: 110 YLGHFLLTNLLLPVLKASAPSRIVNVSSIAHRAGPIDFNDLDLENNKEYSPYKAYGQSKL 169

Query: 182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDM 213
             I  T+ +A+      + VNA+ PG + +++
Sbjct: 170 ANILFTRELARRLEGTGVTVNALHPGVVRTEL 201

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score = 88.5 bits (220), Expect = 1e-20
 Identities = 54/169 (31%), Positives = 87/169 (51%), Gaps = 9/169 (5%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEA-EEVCKEIEASGGQALTFGGDVS 86
           VAV+TGA+ G G A A      G K+++  A   ++A +    E+ A G + L    DVS
Sbjct: 8   VAVITGAASGFGLAFARIGAALGMKLVL--ADVQQDALDRAVAELRAQGAEVLGVRTDVS 65

Query: 87  KEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
             A VE++   A++ +G V +L NNAG+    L+     + W+ V+ +NL GV    +A 
Sbjct: 66  DAAQVEALADAALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAF 125

Query: 147 AKIMMKKKK------GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKT 189
             +M+   +      G I+N AS+ GL+       Y+ +K  V+ LT+T
Sbjct: 126 TPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMGIYNVSKHAVVSLTET 174

Length = 287

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 86.3 bits (214), Expect = 3e-20
 Identities = 61/196 (31%), Positives = 93/196 (47%), Gaps = 8/196 (4%)

Query: 24  VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGG 83
           ++    +VTGA+RGIG+A   SL   G K +    R    A  +  +    G + +    
Sbjct: 1   IKDKTVLVTGANRGIGKAFVESLLAHGAKKVYAAVRDPGSAAHLVAK---YGDKVVPLRL 57

Query: 84  DVSKEADVESMIKTAVDAWGTVDILINNAGI-TRDTLLMRMKKSQWQDVIDLNLTGVFLC 142
           DV+   D ES IK A      VD++INNAG+    TLL        +  +D+N+ G+   
Sbjct: 58  DVT---DPES-IKAAAAQAKDVDVVINNAGVLKPATLLEEGALEALKQEMDVNVFGLLRL 113

Query: 143 TQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
            QA A ++     G I+N+ SV  L        YSA+K+    LT+ +  E A++   V 
Sbjct: 114 AQAFAPVLKANGGGAIVNLNSVASLKNFPAMGTYSASKSAAYSLTQGLRAELAAQGTLVL 173

Query: 203 AIAPGFIASDMTAKLG 218
           ++ PG I + M A  G
Sbjct: 174 SVHPGPIDTRMAAGAG 189

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional

 Score = 86.3 bits (214), Expect = 4e-20
 Identities = 37/85 (43%), Positives = 54/85 (63%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
            A+VTG+SRGIG   A  L  AG  V+VNY + +  A +V  EIEA+GG+A   G D++ 
Sbjct: 8   TALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTD 67

Query: 88  EADVESMIKTAVDAWGTVDILINNA 112
           E  V +++ TA + +G +D L+ NA
Sbjct: 68  EESVAALMDTAREEFGGLDALVLNA 92

Length = 248

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 86.2 bits (214), Expect = 6e-20
 Identities = 61/199 (30%), Positives = 97/199 (48%), Gaps = 11/199 (5%)

Query: 27  PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVS 86
            VA+VTGAS GIG+A A  L   G  V     R  K      +++ + G   L+   DV+
Sbjct: 4   KVALVTGASSGIGKATARRLAAQGYTVYGAARRVDK-----MEDLASLGVHPLSL--DVT 56

Query: 87  KEADVESMIKTAVDAWGTVDILINNAGITRDTLL--MRMKKSQWQDVIDLNLTGVFLCTQ 144
            EA +++ + T +   G +D+L+NNAG      +  + + +++ Q   ++NL G    TQ
Sbjct: 57  DEASIKAAVDTIIAEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQ--FEVNLFGAARLTQ 114

Query: 145 AAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAI 204
                M  ++ GRIINI+S+ G +     A Y A K  + G +  +  E A   I+V  I
Sbjct: 115 LVLPHMRAQRSGRIINISSMGGKIYTPLGAWYHATKFALEGFSDALRLEVAPFGIDVVVI 174

Query: 205 APGFIASDMTAKLGEDLEK 223
            PG I ++      + L K
Sbjct: 175 EPGGIKTEWGDIAADHLLK 193

Length = 273

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 84.4 bits (209), Expect = 1e-19
 Identities = 58/217 (26%), Positives = 92/217 (42%), Gaps = 12/217 (5%)

Query: 31  VTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEAD 90
           +TGA+ GIGR  A    + G  V + Y         +  E+ A     +    DV+  A 
Sbjct: 5   ITGAASGIGRETALLFARNGWFVGL-YDIDEDGLAALAAELGA--ENVVAGALDVTDRAA 61

Query: 91  VE-SMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKI 149
              ++   A    G +D L NNAG+ R      +  +    ++D+N+ GV     AA   
Sbjct: 62  WAAALADFAAATGGRLDALFNNAGVGRGGPFEDVPLAAHDRMVDINVKGVLNGAYAALPY 121

Query: 150 MMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFI 209
           +      R+IN AS   + G    A YSA K  V GLT+ +  E+A   I V  + P F+
Sbjct: 122 LKATPGARVINTASSSAIYGQPDLAVYSATKFAVRGLTEALDVEWARHGIRVADVWPWFV 181

Query: 210 ASDM--TAKLGEDLEKKILEKIPLGRYGQPEEVAGLV 244
            + +    + G   +K +   +P        +VA +V
Sbjct: 182 DTPILTKGETGAAPKKGLGRVLP------VSDVAKVV 212

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 84.6 bits (210), Expect = 1e-19
 Identities = 60/199 (30%), Positives = 89/199 (44%), Gaps = 12/199 (6%)

Query: 23  NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFG 82
           +++  V +VTGA+RGIGRA    L   G   +   AR  +   +            L   
Sbjct: 3   DIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-----LGPRVVPLQL- 56

Query: 83  GDVSKEADVESMIKTAVDAWGTVDILINNAGITR-DTLLMRMKKSQWQDVIDLNLTGVFL 141
            DV+  A V      A +A   V IL+NNAGI R  +LL+   +   +  ++ N  G   
Sbjct: 57  -DVTDPASVA----AAAEAASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLA 111

Query: 142 CTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINV 201
             +A A ++     G I+N+ SV+  V       YSA+KA    LT+ +  E A +   V
Sbjct: 112 MARAFAPVLAANGGGAIVNVLSVLSWVNFPNLGTYSASKAAAWSLTQALRAELAPQGTRV 171

Query: 202 NAIAPGFIASDMTAKLGED 220
             + PG I +DM A L   
Sbjct: 172 LGVHPGPIDTDMAAGLDAP 190

Length = 238

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score = 85.1 bits (211), Expect = 2e-19
 Identities = 65/244 (26%), Positives = 111/244 (45%), Gaps = 29/244 (11%)

Query: 27  PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGG------QALT 80
            +A+VTGAS G G      L K G  V+    R+ ++ E +  +            Q L 
Sbjct: 4   KIAIVTGASSGFGLLTTLELAKKGYLVIAT-MRNPEKQENLLSQATQLNLQQNIKVQQL- 61

Query: 81  FGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVF 140
              DV+ +  + +  +  +   G +D+L+NNAG      +  +   +++   + N+ G  
Sbjct: 62  ---DVTDQNSIHN-FQLVLKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAI 117

Query: 141 LCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNIN 200
             TQA    M K+K G+IINI+S+ G VG  G + Y ++K  + G ++++  E     I+
Sbjct: 118 SVTQAVLPYMRKQKSGKIINISSISGRVGFPGLSPYVSSKYALEGFSESLRLELKPFGID 177

Query: 201 VNAIAPG--------------FIASDMTAKLGEDLEKKILEKIPLG--RYGQPEEVAGLV 244
           V  I PG                 S+ T+   ++  KKI + I  G   +G P +VA L+
Sbjct: 178 VALIEPGSYNTNIWEVGKQLAENQSETTSPY-KEYMKKIQKHINSGSDTFGNPIDVANLI 236

Query: 245 EFLA 248
             +A
Sbjct: 237 VEIA 240

Length = 280

>gnl|CDD|135637 PRK05876, PRK05876, short chain dehydrogenase; Provisional

 Score = 82.3 bits (203), Expect = 2e-18
 Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 4/189 (2%)

Query: 29  AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEA-EEVCKEIEASGGQALTFGGDVSK 87
           AV+TG + GIG A  T   + G +V++      K    +    + A G        DV  
Sbjct: 9   AVITGGASGIGLATGTEFARRGARVVL--GDVDKPGLRQAVNHLRAEGFDVHGVMCDVRH 66

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQA-A 146
             +V  +   A    G VD++ +NAGI     ++ M    W+ VID++L G     +A  
Sbjct: 67  REEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFL 126

Query: 147 AKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
            +++ +   G ++  AS  GLV N G   Y  AK GV+GL +T+A+E  +  I V+ + P
Sbjct: 127 PRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCP 186

Query: 207 GFIASDMTA 215
             + +++ A
Sbjct: 187 MVVETNLVA 195

Length = 275

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 81.7 bits (202), Expect = 3e-18
 Identities = 55/191 (28%), Positives = 91/191 (47%), Gaps = 8/191 (4%)

Query: 30  VVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEA 89
           ++TGAS GIG A A    + G  V+   AR     + V   I  +GG A+    D+S   
Sbjct: 44  LLTGASSGIGEAAAEQFARRGATVVA-VARREDLLDAVADRITRAGGDAMAVPCDLSDLD 102

Query: 90  DVESMIKTAVDAWGTVDILINNAGIT-RDTLLMRMKKSQWQDV---IDLNLTGVFLCTQA 145
            V++++       G VDILINNAG + R  L   + +  W DV   + LN        + 
Sbjct: 103 AVDALVADVEKRIGGVDILINNAGRSIRRPLAESLDR--WHDVERTMVLNYYAPLRLIRG 160

Query: 146 AAKIMMKKKKGRIINIASVVGLVGNIGQ-ANYSAAKAGVIGLTKTVAKEYASRNINVNAI 204
            A  M+++  G IIN+A+   L       + Y+A+KA +  +++ +  E+  R ++   +
Sbjct: 161 LAPGMLERGDGHIINVATWGVLSEASPLFSVYNASKAALSAVSRVIETEWGDRGVHSTTL 220

Query: 205 APGFIASDMTA 215
               +A+ M A
Sbjct: 221 YYPLVATPMIA 231

Length = 293

>gnl|CDD|219957 pfam08659, KR, KR domain

 Score = 78.3 bits (194), Expect = 7e-18
 Identities = 46/155 (29%), Positives = 75/155 (48%), Gaps = 7/155 (4%)

Query: 30  VVTGASRGIGRAVATSLGKAGCKVLVNYARS---SKEAEEVCKEIEASGGQALTFGGDVS 86
           +VTG   G+G  +A  L + G + LV  +RS     EAE +  E+EA G +      DVS
Sbjct: 4   LVTGGLGGLGLELARWLAERGARHLVLLSRSGAPDPEAEALLAELEARGAEVTVVACDVS 63

Query: 87  KEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
               V +++         +  +I+ AG+ RD LL  M    +  V+   +TG +   +A 
Sbjct: 64  DRDAVRALLAEIRADGPPLRGVIHAAGVLRDALLANMTAEDFARVLAPKVTGAWNLHEAT 123

Query: 147 AKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKA 181
               +       +  +S+ G++G+ GQANY+AA A
Sbjct: 124 RDRPLD----FFVLFSSIAGVLGSPGQANYAAANA 154

This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181

>gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional

 Score = 80.2 bits (198), Expect = 1e-17
 Identities = 59/205 (28%), Positives = 103/205 (50%), Gaps = 8/205 (3%)

Query: 26  APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDV 85
            PV ++TG S GIGRA+A +   AG +V      ++++AE+V + + A+G  A+    DV
Sbjct: 1   MPVVLITGCSSGIGRALADAFKAAGYEVWA----TARKAEDV-EALAAAGFTAVQL--DV 53

Query: 86  SKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQA 145
           +  A +  + +      G +D+LINNAG      L+       +   + N+  V   T+A
Sbjct: 54  NDGAALARLAEELEAEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRA 113

Query: 146 AAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIA 205
               ++++ +G ++NI SV G++       Y A+KA V  L+  +  E A   + V  + 
Sbjct: 114 LFP-LLRRSRGLVVNIGSVSGVLVTPFAGAYCASKAAVHALSDALRLELAPFGVQVMEVQ 172

Query: 206 PGFIASDMTAKLGEDLEKKILEKIP 230
           PG IAS   +    + E+ + E+ P
Sbjct: 173 PGAIASQFASNASREAEQLLAEQSP 197

Length = 274

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 80.0 bits (198), Expect = 2e-17
 Identities = 63/224 (28%), Positives = 111/224 (49%), Gaps = 9/224 (4%)

Query: 23  NVEAPVAVVTGASRGIGRAVATSLGKAGCKV-LVNYARSSKEAEEVCKEIEASGGQALTF 81
           ++   V VVTGA+RGIG  +A  L   G K+ LV+      E   +  E+     + LT 
Sbjct: 6   SLAGKVVVVTGAARGIGAELARRLHARGAKLALVD--LEEAELAALAAELG-GDDRVLTV 62

Query: 82  GGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFL 141
             DV+  A +++  + AV+ +G +D+++ NAGI     + ++    ++ VID+NL GVF 
Sbjct: 63  VADVTDLAAMQAAAEEAVERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFH 122

Query: 142 CTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINV 201
            T  A    + +++G ++ ++S+       G A Y A+KAGV      +  E A   + V
Sbjct: 123 -TVRATLPALIERRGYVLQVSSLAAFAAAPGMAAYCASKAGVEAFANALRLEVAHHGVTV 181

Query: 202 NAIAPGFIASDMTAKLGEDLE--KKILEKIP--LGRYGQPEEVA 241
            +    +I +D+      DL   +++  ++P  L R    E+ A
Sbjct: 182 GSAYLSWIDTDLVRDADADLPAFRELRARLPWPLRRTTSVEKCA 225

Length = 296

>gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional

 Score = 79.0 bits (195), Expect = 6e-17
 Identities = 57/188 (30%), Positives = 88/188 (46%), Gaps = 2/188 (1%)

Query: 23  NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFG 82
            +   V V+TGAS GIG+A A +  + G + LV  AR  +  + V +E  A G + L   
Sbjct: 4   PLHGAVVVITGASSGIGQATAEAFARRGAR-LVLAARDEEALQAVAEECRALGAEVLVVP 62

Query: 83  GDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLC 142
            DV+    V+++   A    G +D+ +NN G+              + VI  NL G    
Sbjct: 63  TDVTDADQVKALATQAASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRD 122

Query: 143 TQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYAS-RNINV 201
             AA  I  K+  G  IN+ S+ G       A YSA+K G+ G ++ +  E A   +I+V
Sbjct: 123 AHAALPIFKKQGHGIFINMISLGGFAAQPYAAAYSASKFGLRGFSEALRGELADHPDIHV 182

Query: 202 NAIAPGFI 209
             + P F+
Sbjct: 183 CDVYPAFM 190

Length = 330

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 78.9 bits (195), Expect = 8e-17
 Identities = 55/187 (29%), Positives = 85/187 (45%), Gaps = 14/187 (7%)

Query: 3   HAGIRAQVATIEQATNEAAQNVEAP-----VAVVTGASRGIGRAVATSLGKAGCKVLVNY 57
           +      V T+E     A     AP     V +VTG + GIGRA+A +L +     LV  
Sbjct: 177 YRDGLRYVQTLEPLPLPAGAAASAPLKPGGVYLVTGGAGGIGRALARALARRYGARLVLL 236

Query: 58  ARSSKEAEEVCK-----EIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNA 112
            RS    EE  K      +EA G + L    DV+  A V  +++   + +G +D +I+ A
Sbjct: 237 GRSPLPPEEEWKAQTLAALEALGARVLYISADVTDAAAVRRLLEKVRERYGAIDGVIHAA 296

Query: 113 GITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIG 172
           G+ RD LL +     ++ V+   + G+    QA A     +     +  +SV    G  G
Sbjct: 297 GVLRDALLAQKTAEDFEAVLAPKVDGLLNLAQALA----DEPLDFFVLFSSVSAFFGGAG 352

Query: 173 QANYSAA 179
           QA+Y+AA
Sbjct: 353 QADYAAA 359

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases

 Score = 74.1 bits (183), Expect = 3e-16
 Identities = 39/161 (24%), Positives = 75/161 (46%), Gaps = 23/161 (14%)

Query: 30  VVTGASRGIGRAVATSLGKAGCK--VLVNYARS---SKEAEEVCKEIEASGGQALTFGGD 84
           ++TG   G+GRA+A  L + G +  VL+  +RS   +  A  +  E+EA+G +      D
Sbjct: 4   LITGGLGGLGRALARWLAERGARRLVLL--SRSGPDAPGAAALLAELEAAGARVTVVACD 61

Query: 85  VSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVID------LNLTG 138
           V+    + +++       G +  +I+ AG+  D +L  +   ++  V+        NL  
Sbjct: 62  VADRDALAAVLAAIPAVEGPLTGVIHAAGVLDDGVLASLTPERFAAVLAPKAAGAWNLHE 121

Query: 139 VFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAA 179
           +         ++           +S+ G++G+ GQANY+AA
Sbjct: 122 LTADLPLDFFVLF----------SSIAGVLGSPGQANYAAA 152

It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180

>gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs

 Score = 74.8 bits (184), Expect = 7e-16
 Identities = 60/271 (22%), Positives = 104/271 (38%), Gaps = 59/271 (21%)

Query: 30  VVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEA 89
           V+TGA+ GIG A A  L  AG  V+       +EA+                  D+S   
Sbjct: 3   VITGAASGIGAATAELLEDAGHTVI---GIDLREAD---------------VIADLSTPE 44

Query: 90  DVESMI-KTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAK 148
              + I        G +D L+N AG+   T+           V+ +N  G+    +A   
Sbjct: 45  GRAAAIADVLARCSGVLDGLVNCAGVGGTTVA--------GLVLKVNYFGLRALMEALLP 96

Query: 149 IMMKKKKGRIINIASVVGLVGN---------------------------IGQANYSAAKA 181
            + K      + ++S+ G                                G   Y+ +K 
Sbjct: 97  RLRKGHGPAAVVVSSIAGAGWAQDKLELAKALAAGTEARAVALAEHAGQPGYLAYAGSKE 156

Query: 182 GVIGLTKTVAKEYAS-RNINVNAIAPGFIASDMTAKLGED-LEKKILEKI--PLGRYGQP 237
            +   T+  A  +     + VN +APG + + +     +D    + ++    P+GR  +P
Sbjct: 157 ALTVWTRRRAATWLYGAGVRVNTVAPGPVETPILQAFLQDPRGGESVDAFVTPMGRRAEP 216

Query: 238 EEVAGLVEFLALNPAAGYITGQVLTIDGGMV 268
           +E+A ++ FLA + AA +I G  L +DGG+ 
Sbjct: 217 DEIAPVIAFLA-SDAASWINGANLFVDGGLD 246

Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|180766 PRK06940, PRK06940, short chain dehydrogenase; Provisional

 Score = 73.9 bits (182), Expect = 2e-15
 Identities = 71/275 (25%), Positives = 112/275 (40%), Gaps = 48/275 (17%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           V VV GA  GIG+A+A  +G AG KVL+    + +  E   K +  +G    T   DVS 
Sbjct: 4   VVVVIGAG-GIGQAIARRVG-AGKKVLLA-DYNEENLEAAAKTLREAGFDVSTQEVDVSS 60

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
              V+++  TA    G V  L++ AG++         ++  + ++ ++L G  L  +   
Sbjct: 61  RESVKALAATAQ-TLGPVTGLVHTAGVSP-------SQASPEAILKVDLYGTALVLEEFG 112

Query: 148 KIMMKKKKGRIINIASVVG----------------------------LVGNIGQ--ANYS 177
           K++     G  + IAS  G                                I      Y 
Sbjct: 113 KVI--APGGAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPFLQPDAIEDSLHAYQ 170

Query: 178 AAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMT----AKLGEDLEKKILEKIPLGR 233
            AK          A ++  R   +N+I+PG I++ +          D  + +  K P GR
Sbjct: 171 IAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKSPAGR 230

Query: 234 YGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMV 268
            G P+E+A L EFL + P   +ITG    +DGG  
Sbjct: 231 PGTPDEIAALAEFL-MGPRGSFITGSDFLVDGGAT 264

Length = 275

>gnl|CDD|187630 cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP) reductase (ENR), divergent SDR

 Score = 73.4 bits (181), Expect = 2e-15
 Identities = 62/263 (23%), Positives = 109/263 (41%), Gaps = 44/263 (16%)

Query: 29  AVVTGAS--RGIGRAVATSLGKAGCKVLVNYA--RSSKEAEEVCKEIEASGGQALTFGGD 84
            ++TG +  R I   +A +L +AG ++   Y      K  E++ + +   G  AL    D
Sbjct: 4   ILITGIANDRSIAWGIAKALHEAGAELAFTYQPEALRKRVEKLAERL---GESALVLPCD 60

Query: 85  VSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLC-- 142
           VS + +++ +       WG +D L+++          ++K       +D +  G      
Sbjct: 61  VSNDEEIKELFAEVKKDWGKLDGLVHSIAFAPKV---QLKG----PFLDTSRKGFLKALD 113

Query: 143 ---------TQAAAKIMMKKKKGRIINIASVVGLVGNIGQ----ANY---SAAKAGVIGL 186
                     +AA  IM     G      S+V L   +G       Y     AKA +   
Sbjct: 114 ISAYSLVSLAKAALPIM---NPG-----GSIVTL-SYLGSERVVPGYNVMGVAKAALESS 164

Query: 187 TKTVAKEYASRNINVNAIAPGFIASDMTAKLG--EDLEKKILEKIPLGRYGQPEEVAGLV 244
            + +A E   + I VNAI+ G I +   + +   + + +   ++ PLGR    EEV    
Sbjct: 165 VRYLAYELGRKGIRVNAISAGPIKTLAASGITGFDKMLEYSEQRAPLGRNVTAEEVGNTA 224

Query: 245 EFLALNPAAGYITGQVLTIDGGM 267
            FL L+  +  ITG+++ +DGG 
Sbjct: 225 AFL-LSDLSSGITGEIIYVDGGY 246

This bacterial subgroup of ENRs includes Escherichia coli ENR. ENR catalyzes the NAD(P)H-dependent reduction of enoyl-ACP in the last step of fatty acid biosynthesis. De novo fatty acid biosynthesis is catalyzed by the fatty acid synthetase complex, through the serial addition of 2-carbon subunits. In bacteria and plants,ENR catalyzes one of six synthetic steps in this process. Oilseed rape ENR, and also apparently the NADH-specific form of Escherichia coli ENR, is tetrameric. Although similar to the classical SDRs, this group does not have the canonical catalytic tetrad, nor does it have the typical Gly-rich NAD-binding pattern. Such so-called divergent SDRs have a GXXXXXSXA NAD-binding motif and a YXXMXXXK (or YXXXMXXXK) active site motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|180586 PRK06483, PRK06483, dihydromonapterin reductase; Provisional

 Score = 72.7 bits (179), Expect = 3e-15
 Identities = 66/254 (25%), Positives = 108/254 (42%), Gaps = 37/254 (14%)

Query: 26  APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDV 85
           AP+ ++TGA + IG A+A  L   G  V+V+Y R+   A +    +  +G  A     D 
Sbjct: 3   API-LITGAGQRIGLALAWHLLAQGQPVIVSY-RTHYPAID---GLRQAG--AQCIQADF 55

Query: 86  SKEADVESMIKTAVDAWGTVDILINNA--------GITRDTLLMRMKKSQWQDVIDLNLT 137
           S  A + + I         +  +I+NA        G     +L RM        + +++ 
Sbjct: 56  STNAGIMAFIDELKQHTDGLRAIIHNASDWLAEKPGAPLADVLARM--------MQIHVN 107

Query: 138 GVFLCTQAAAKIMMKKKKGR--IINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYA 195
             +L   A   ++         II+I   V   G+     Y+A+KA +  +T + A + A
Sbjct: 108 APYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDKHIAYAASKAALDNMTLSFAAKLA 167

Query: 196 SRNINVNAIAPGFI---ASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPA 252
              + VN+IAP  I     D          +K L K  L      EE+  LV++L  +  
Sbjct: 168 P-EVKVNSIAPALILFNEGD-----DAAYRQKALAKSLLKIEPGEEEIIDLVDYLLTSC- 220

Query: 253 AGYITGQVLTIDGG 266
             Y+TG+ L +DGG
Sbjct: 221 --YVTGRSLPVDGG 232

Length = 236

>gnl|CDD|166421 PLN02780, PLN02780, ketoreductase/ oxidoreductase

 Score = 73.7 bits (181), Expect = 3e-15
 Identities = 56/197 (28%), Positives = 96/197 (48%), Gaps = 15/197 (7%)

Query: 29  AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQA------LTFG 82
           A+VTG + GIG+  A  L + G   LV  AR+  + ++V   I++   +       + F 
Sbjct: 56  ALVTGPTDGIGKGFAFQLARKGLN-LVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFS 114

Query: 83  GDVSKEADVESMIKTAVDAWGTVDILINNAGITRD--TLLMRMKKSQWQDVIDLNLTGVF 140
           GD+ +       IK  ++    V +LINN G++         + +   +++I +N+ G  
Sbjct: 115 GDIDEGV---KRIKETIEGL-DVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTT 170

Query: 141 LCTQAAAKIMMKKKKGRIINIASVVGLV--GNIGQANYSAAKAGVIGLTKTVAKEYASRN 198
             TQA    M+K+KKG IINI S   +V   +   A Y+A KA +   ++ +  EY    
Sbjct: 171 KVTQAVLPGMLKRKKGAIINIGSGAAIVIPSDPLYAVYAATKAYIDQFSRCLYVEYKKSG 230

Query: 199 INVNAIAPGFIASDMTA 215
           I+V    P ++A+ M +
Sbjct: 231 IDVQCQVPLYVATKMAS 247

Length = 320

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 72.1 bits (177), Expect = 5e-15
 Identities = 63/234 (26%), Positives = 102/234 (43%), Gaps = 26/234 (11%)

Query: 31  VTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQAL-TFGGDVSKEA 89
           VTGA+ G G  +     + G KV+    R     +E  +E++   G  L     DV   A
Sbjct: 5   VTGATAGFGECITRRFIQQGHKVIATGRR-----QERLQELKDELGDNLYIAQLDVRNRA 59

Query: 90  DVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQ------WQDVIDLNLTGVFLCT 143
            +E M+ +    W  +D+L+NNAG     L + ++ +       W+ +ID N  G+   T
Sbjct: 60  AIEEMLASLPAEWRNIDVLVNNAG-----LALGLEPAHKASVEDWETMIDTNNKGLVYMT 114

Query: 144 QAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNA 203
           +A    M+++  G IINI S  G     G   Y A KA V   +  +  +     + V  
Sbjct: 115 RAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTD 174

Query: 204 IAPGFIA----SDMTAKLGEDLEKKILEKI-PLGRYGQPEEVAGLVEFLALNPA 252
           I PG +     S++  K  +   +K  +    L     PE+V+  V ++A  PA
Sbjct: 175 IEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVAL----TPEDVSEAVWWVATLPA 224

Length = 248

>gnl|CDD|235608 PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 70.2 bits (172), Expect = 2e-14
 Identities = 62/241 (25%), Positives = 109/241 (45%), Gaps = 19/241 (7%)

Query: 30  VVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEA 89
            + G S G+G AVA    K G +V +N +R+  + + + K + +  G      GDVS   
Sbjct: 9   AIIGVSEGLGYAVAYFALKEGAQVCIN-SRNENKLKRMKKTL-SKYGNIHYVVGDVSSTE 66

Query: 90  DVESMIKTAVDAWGTVDILINNAG-ITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAK 148
              ++I+ A      +D L+   G    DT+    + S  ++++  ++        A+ +
Sbjct: 67  SARNVIEKAAKVLNAIDGLVVTVGGYVEDTV---EEFSGLEEMLTNHIKIPLYAVNASLR 123

Query: 149 IMMKKKKGRIINIASVVGLVGNIG--QANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
            +   K+G  I + S +  +      Q +Y+ AKAG+    + +A E   R I VN IAP
Sbjct: 124 FL---KEGSSIVLVSSMSGIYKASPDQLSYAVAKAGLAKAVEILASELLGRGIRVNGIAP 180

Query: 207 GFIASDMTAKLGEDLEKKILEKIPLGRYGQ-PEEVAGLVEFLALNPAAGYITGQVLTIDG 265
             I+ D       + +K       LG     PE+ A ++ +L L   A ++ G V+ +DG
Sbjct: 181 TTISGDFEP--ERNWKK----LRKLGDDMAPPEDFAKVIIWL-LTDEADWVDGVVIPVDG 233

Query: 266 G 266
           G
Sbjct: 234 G 234

Length = 238

>gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

 Score = 70.8 bits (174), Expect = 2e-14
 Identities = 57/221 (25%), Positives = 103/221 (46%), Gaps = 25/221 (11%)

Query: 31  VTGASRGIGRAVATSLGKAGCKVLVN-YARSSKEAEEVCKEIEASGGQALTFGGDVSKEA 89
           +TG   G G  +A  L   G  VL     ++   A+E+ + + +   + L    DV+K  
Sbjct: 5   ITGCDSGFGNLLAKKLDSLGFTVLAGCLTKNGPGAKEL-RRVCSDRLRTLQL--DVTKPE 61

Query: 90  DVESMIK------TAVDAWGTVDILINNAGIT---RDTLLMRMKKSQWQDVIDLNLTGVF 140
            ++   +           WG    L+NNAGI     D  L+ M    ++  +++NL G  
Sbjct: 62  QIKRAAQWVKEHVGEKGLWG----LVNNAGILGFGGDEELLPM--DDYRKCMEVNLFGTV 115

Query: 141 LCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNIN 200
             T+A    ++++ KGR++N++S+ G V       Y A+KA V   + ++ +E     + 
Sbjct: 116 EVTKAFLP-LLRRAKGRVVNVSSMGGRVPFPAGGAYCASKAAVEAFSDSLRRELQPWGVK 174

Query: 201 VNAIAPGFIASDMT--AKLGEDLEKKILEKIP---LGRYGQ 236
           V+ I PG   + +T  ++L E   KK+ E++P      YG+
Sbjct: 175 VSIIEPGNFKTGITGNSELWEKQAKKLWERLPPEVKKDYGE 215

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score = 70.2 bits (172), Expect = 4e-14
 Identities = 57/252 (22%), Positives = 101/252 (40%), Gaps = 27/252 (10%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGG--DV 85
             ++TGA+ GIG+  A  L + G +V++   R   + EE   EI              D+
Sbjct: 3   TVIITGANTGIGKETARELARRGARVIMA-CRDMAKCEEAAAEIRRDTLNHEVIVRHLDL 61

Query: 86  SKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDL----NLTGVFL 141
           +    + +     +     +D+LINNAG+      MR   S+ +D  ++    N  G FL
Sbjct: 62  ASLKSIRAFAAEFLAEEDRLDVLINNAGV------MRCPYSKTEDGFEMQFGVNHLGHFL 115

Query: 142 CTQAAAKIMMKKKKGRIINIASVVGLVGNIG------------QANYSAAKAGVIGLTKT 189
            T     ++ K    RI+N++S+    G I                Y  +K   +  T+ 
Sbjct: 116 LTNLLLDLLKKSAPSRIVNVSSLAHKAGKINFDDLNSEKSYNTGFAYCQSKLANVLFTRE 175

Query: 190 VAKEYASRNINVNAIAPGFIASDMTAKLG--EDLEKKILEKIPLGRYGQPEEVAGLVEFL 247
           +A+      + VNA+ PG + +++    G        +L  +       P E A    +L
Sbjct: 176 LARRLQGTGVTVNALHPGVVRTELGRHTGIHHLFLSTLLNPLFWPFVKTPREGAQTSIYL 235

Query: 248 ALNPAAGYITGQ 259
           AL      ++G+
Sbjct: 236 ALAEELEGVSGK 247

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|223696 COG0623, FabI, Enoyl-[acyl-carrier-protein]

 Score = 69.9 bits (172), Expect = 4e-14
 Identities = 61/263 (23%), Positives = 110/263 (41%), Gaps = 47/263 (17%)

Query: 29  AVVTGAS--RGIGRAVATSLGKAGCKVLVNYA--RSSKEAEEVCKEIEASGGQALTFGGD 84
            ++ G +  R I   +A +L + G ++   Y   R  K  EE+ +E+    G  L    D
Sbjct: 9   ILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEEL----GSDLVLPCD 64

Query: 85  VSKEADVESMIKTAVDAWGTVDILINNAG-------------ITRDTLLMRMKKSQWQDV 131
           V+ +  ++++  T    WG +D L+++                +R+  L+ M  S +   
Sbjct: 65  VTNDESIDALFATIKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAY--- 121

Query: 132 IDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQ---ANY---SAAKAGVIG 185
              + T +    +AA  +M     G      S++ L     +    NY     AKA +  
Sbjct: 122 ---SFTAL---AKAARPLM---NNG-----GSILTLTYLGSERVVPNYNVMGVAKAALEA 167

Query: 186 LTKTVAKEYASRNINVNAIAPGFIASDMTAKLG--EDLEKKILEKIPLGRYGQPEEVAGL 243
             + +A +     I VNAI+ G I +   + +G    + K+     PL R    EEV   
Sbjct: 168 SVRYLAADLGKEGIRVNAISAGPIRTLAASGIGDFRKMLKENEANAPLRRNVTIEEVGNT 227

Query: 244 VEFLALNPAAGYITGQVLTIDGG 266
             FL  + ++G ITG+++ +D G
Sbjct: 228 AAFLLSDLSSG-ITGEIIYVDSG 249

Length = 259

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 69.0 bits (169), Expect = 6e-14
 Identities = 41/178 (23%), Positives = 75/178 (42%), Gaps = 7/178 (3%)

Query: 31  VTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEAD 90
           +TG + GIG A+A    + G  V++   R+ +   E   E         T   DV+    
Sbjct: 10  ITGGASGIGLALAKRFLELGNTVIIC-GRNEERLAEAKAENPE----IHTEVCDVADRDS 64

Query: 91  VESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKS--QWQDVIDLNLTGVFLCTQAAAK 148
              +++     +  +++LINNAGI R+  L   +      +  I  NL      T     
Sbjct: 65  RRELVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLP 124

Query: 149 IMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
            ++++ +  IIN++S +  V       Y A KA +   T  + ++    ++ V  +AP
Sbjct: 125 HLLRQPEATIINVSSGLAFVPMASTPVYCATKAAIHSYTLALREQLKDTSVEVIELAP 182

Length = 245

>gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional

 Score = 67.8 bits (166), Expect = 2e-13
 Identities = 53/198 (26%), Positives = 87/198 (43%), Gaps = 17/198 (8%)

Query: 29  AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKE 88
            ++TG S+G+G A+A  L + G  V    + S  E +E+ K  E           D+   
Sbjct: 4   VIITGTSQGLGEAIANQLLEKGTHV---ISISRTENKELTKLAEQYNSNLTFHSLDLQDV 60

Query: 89  ADVESMIKT---AVDAWGTVDI-LINNAGITRDTLLMRMKKS---QWQDVIDLNLTGVFL 141
            ++E+       ++       I LINNAG+     +  ++K+   +    + LNL    +
Sbjct: 61  HELETNFNEILSSIQEDNVSSIHLINNAGMV--APIKPIEKAESEELITNVHLNLLAPMI 118

Query: 142 CTQAAAKIMMKKKKG--RIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNI 199
            T    K   K  K   R+INI+S        G + Y ++KAG+   T+TVA E      
Sbjct: 119 LTSTFMK-HTKDWKVDKRVINISSGAAKNPYFGWSAYCSSKAGLDMFTQTVATEQEEEEY 177

Query: 200 NVNAIA--PGFIASDMTA 215
            V  +A  PG + ++M A
Sbjct: 178 PVKIVAFSPGVMDTNMQA 195

Length = 251

>gnl|CDD|233441 TIGR01500, sepiapter_red, sepiapterin reductase

 Score = 66.5 bits (162), Expect = 6e-13
 Identities = 66/208 (31%), Positives = 99/208 (47%), Gaps = 16/208 (7%)

Query: 28  VAVVTGASRGIGRAVATSLGK---AGCKVLVNYARSSKEAEEVCKEIEA--SGGQALTFG 82
           V +VTGASRG GR +A  L K   +   VLV  AR+ +   ++  EI A  SG + +   
Sbjct: 2   VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVS 61

Query: 83  GDVSKEADVESMIKTAVDAWGTVD----ILINNAGITRDTLLMRMKKS---QWQDVIDLN 135
            D+  EA +E ++K   +          +LINNAG   D     +  S   Q Q+   LN
Sbjct: 62  LDLGAEAGLEQLLKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALN 121

Query: 136 LTGVFLCTQAAAKIMMKKKKG---RIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAK 192
           LT   LC  ++     K   G    ++NI+S+  +    G A Y A KA    L + +A 
Sbjct: 122 LTS-MLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKGWALYCAGKAARDMLFQVLAL 180

Query: 193 EYASRNINVNAIAPGFIASDMTAKLGED 220
           E  + N+ V   APG + +DM  ++ E+
Sbjct: 181 EEKNPNVRVLNYAPGVLDTDMQQQVREE 208

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. Length = 256

>gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs

 Score = 65.9 bits (161), Expect = 1e-12
 Identities = 53/199 (26%), Positives = 88/199 (44%), Gaps = 5/199 (2%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYA--RSSKEAEEVCKEIEASGGQALTFGG-D 84
           V ++TG S GIG  +A  L     K    YA  R  K+   + +   A  G  L     D
Sbjct: 2   VVLITGCSSGIGLHLAVRLASDPSKRFKVYATMRDLKKKGRLWEAAGALAGGTLETLQLD 61

Query: 85  VSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQ 144
           V     V + ++   +    VD+L+ NAG+     L  + +     V D+N+ G     Q
Sbjct: 62  VCDSKSVAAAVERVTE--RHVDVLVCNAGVGLLGPLEALSEDAMASVFDVNVFGTVRMLQ 119

Query: 145 AAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAI 204
           A    M ++  GRI+  +SV GL G      Y A+K  + GL +++A +    N++++ I
Sbjct: 120 AFLPDMKRRGSGRILVTSSVGGLQGLPFNDVYCASKFALEGLCESLAVQLLPFNVHLSLI 179

Query: 205 APGFIASDMTAKLGEDLEK 223
             G + +    K+    E+
Sbjct: 180 ECGPVHTAFMEKVLGSPEE 198

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|235914 PRK07041, PRK07041, short chain dehydrogenase; Provisional

 Score = 65.1 bits (159), Expect = 1e-12
 Identities = 63/241 (26%), Positives = 106/241 (43%), Gaps = 19/241 (7%)

Query: 30  VVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEA 89
           +V G S GIG A+A +    G +V +  +RS        + +   G    T   D++ EA
Sbjct: 1   LVVGGSSGIGLALARAFAAEGARVTI-ASRSRDRLAAAARALGG-GAPVRTAALDITDEA 58

Query: 90  DVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKI 149
            V++    A    G  D ++  A  T    +  +  +  Q  +D    G +   + AA+I
Sbjct: 59  AVDAFFAEA----GPFDHVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVAR-AARI 113

Query: 150 MMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFI 209
                   +   A+V      + Q    A  A +  L + +A E A   + VN ++PG +
Sbjct: 114 APGGSLTFVSGFAAVRPSASGVLQG---AINAALEALARGLALELAP--VRVNTVSPGLV 168

Query: 210 ASDMTAKLGEDLEKKIL----EKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDG 265
            + + +KL  D  + +     E++P  R GQPE+VA  + FLA N    + TG  + +DG
Sbjct: 169 DTPLWSKLAGDAREAMFAAAAERLPARRVGQPEDVANAILFLAANG---FTTGSTVLVDG 225

Query: 266 G 266
           G
Sbjct: 226 G 226

Length = 230

>gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional

 Score = 65.3 bits (160), Expect = 1e-12
 Identities = 59/192 (30%), Positives = 91/192 (47%), Gaps = 4/192 (2%)

Query: 30  VVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS--GGQALTFGGDVSK 87
           ++TGAS G+G  +A      G + L   AR +   EE+  E+ A   G +      DV+ 
Sbjct: 6   LITGASSGLGAGMAREFAAKG-RDLALCARRTDRLEELKAELLARYPGIKVAVAALDVND 64

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
              V  +     D  G +D +I NAGI +   L   K    +   + N        +AA 
Sbjct: 65  HDQVFEVFAEFRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAM 124

Query: 148 KIMMKKKKGRIINIASVVGLVGNIG-QANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
           +I  ++  G ++ I+SV  + G  G +A Y+A+KAGV  L + +  E A   I V+ I P
Sbjct: 125 EIFREQGSGHLVLISSVSAVRGLPGVKAAYAASKAGVASLGEGLRAELAKTPIKVSTIEP 184

Query: 207 GFIASDMTAKLG 218
           G+I S+M AK  
Sbjct: 185 GYIRSEMNAKAK 196

Length = 248

>gnl|CDD|180949 PRK07370, PRK07370, enoyl-(acyl carrier protein) reductase; Validated

 Score = 64.4 bits (157), Expect = 4e-12
 Identities = 73/255 (28%), Positives = 116/255 (45%), Gaps = 28/255 (10%)

Query: 29  AVVTGAS--RGIGRAVATSLGKAGCKVLVNY-----ARSSKEAEEVCKEIEASGGQALTF 81
           A+VTG +  R I   +A  L  AG ++ + Y      R  K+  E+ + +  S    L  
Sbjct: 9   ALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPS----LFL 64

Query: 82  GGDVSKEADVESMIKTAVDAWGTVDILI------NNAGITRD-TLLMRMKKSQWQDVIDL 134
             DV  +A +E   +T    WG +DIL+          +  D +   R   ++  ++   
Sbjct: 65  PCDVQDDAQIEETFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAY 124

Query: 135 NLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSA-AKAGVIGLTKTVAKE 193
           +L    LC   AAK +M  + G I+ + + +G V  I   N    AKA +    + +A E
Sbjct: 125 SLAP--LC--KAAKPLM-SEGGSIVTL-TYLGGVRAIPNYNVMGVAKAALEASVRYLAAE 178

Query: 194 YASRNINVNAIAPGFIASDMTAKLGEDLE--KKILEKIPLGRYGQPEEVAGLVEFLALNP 251
              +NI VNAI+ G I +  ++ +G  L+    + EK PL R     EV     FL  + 
Sbjct: 179 LGPKNIRVNAISAGPIRTLASSAVGGILDMIHHVEEKAPLRRTVTQTEVGNTAAFLLSDL 238

Query: 252 AAGYITGQVLTIDGG 266
           A+G ITGQ + +D G
Sbjct: 239 ASG-ITGQTIYVDAG 252

Length = 258

>gnl|CDD|212497 cd11731, Lin1944_like_SDR_c, Lin1944 and related proteins, classical (c) SDRs

 Score = 62.6 bits (153), Expect = 7e-12
 Identities = 49/236 (20%), Positives = 85/236 (36%), Gaps = 38/236 (16%)

Query: 29  AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKE 88
            +V GA+  IG AVA  L   G +V+   A  S    +V                D++ E
Sbjct: 1   IIVIGATGTIGLAVAQLLSAHGHEVIT--AGRSSGDYQV----------------DITDE 42

Query: 89  ADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAK 148
           A ++++ +      G  D +++ AG      L  +  + +Q  ++  L G     +    
Sbjct: 43  ASIKALFEKV----GHFDAIVSTAGDAEFAPLAELTDADFQRGLNSKLLGQINLVRHGLP 98

Query: 149 IMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGF 208
            +     G I   + ++      G A  +     + G  +  A E   R I +NA++PG 
Sbjct: 99  YL--NDGGSITLTSGILAQRPIPGGAAAATVNGALEGFVRAAAIEL-PRGIRINAVSPGV 155

Query: 209 IASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTID 264
           +    + +   D         P       E+VA               TGQVL +D
Sbjct: 156 VEE--SLEAYGDFF-------PGFEPVPAEDVAKAYVRSVEGA----FTGQVLHVD 198

Lin1944 protein from Listeria Innocua is a classical SDR, it contains a glycine-rich motif similar to the canonical motif of the SDR NAD(P)-binding site. However, the typical SDR active site residues are absent in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 198

>gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional

 Score = 63.2 bits (154), Expect = 9e-12
 Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 6/178 (3%)

Query: 31  VTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGG-DVSKEA 89
           +TGAS G GR +   L   G +V     R      +   +++A  G  L     DV+  A
Sbjct: 7   ITGASSGFGRGMTERLLARGDRVAATVRRP-----DALDDLKARYGDRLWVLQLDVTDSA 61

Query: 90  DVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKI 149
            V +++  A  A G +D++++NAG         +  +Q +  ID NL G     +AA   
Sbjct: 62  AVRAVVDRAFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPH 121

Query: 150 MMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
           + ++  GRI+ ++S  G +   G + Y A K G+ G  + VA+E A   I    + PG
Sbjct: 122 LRRQGGGRIVQVSSEGGQIAYPGFSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPG 179

Length = 276

>gnl|CDD|236308 PRK08594, PRK08594, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 61.7 bits (150), Expect = 3e-11
 Identities = 72/267 (26%), Positives = 117/267 (43%), Gaps = 41/267 (15%)

Query: 23  NVEAPVAVVTGAS--RGIGRAVATSLGKAGCKVLVNYA--RSSKEAEEVCKEIEASGGQA 78
           ++E    VV G +  R I   +A SL  AG K++  YA  R  KE  E+   +E  G ++
Sbjct: 4   SLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLE--GQES 61

Query: 79  LTFGGDVSKEADVESMIKTAVDAWGTVD-----ILINN--------AGITRDTLLMRMKK 125
           L    DV+ + ++ +  +T  +  G +      I   N           +RD  L+    
Sbjct: 62  LLLPCDVTSDEEITACFETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLA--- 118

Query: 126 SQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYS---AAKAG 182
              Q++   +LT V    + A K+M +       +I ++  L G     NY+    AKA 
Sbjct: 119 ---QNISAYSLTAV---AREAKKLMTEGG-----SIVTLTYLGGERVVQNYNVMGVAKAS 167

Query: 183 VIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLE---KKILEKIPLGRYGQPEE 239
           +    K +A +     I VNAI+ G I + ++AK         K+I E+ PL R    EE
Sbjct: 168 LEASVKYLANDLGKDGIRVNAISAGPIRT-LSAKGVGGFNSILKEIEERAPLRRTTTQEE 226

Query: 240 VAGLVEFLALNPAAGYITGQVLTIDGG 266
           V     FL  + + G +TG+ + +D G
Sbjct: 227 VGDTAAFLFSDLSRG-VTGENIHVDSG 252

Length = 257

>gnl|CDD|187582 cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatty acid synthase (FAS), complex (x) SDRs

 Score = 62.4 bits (152), Expect = 3e-11
 Identities = 38/154 (24%), Positives = 65/154 (42%), Gaps = 7/154 (4%)

Query: 30  VVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEI--EASGGQALTFGGDVSK 87
           ++TG   G+G  VA  L   G + LV  +R         +     A G +      DV+ 
Sbjct: 154 LITGGLGGLGLLVARWLAARGARHLVLLSRRGPAPRAAARAALLRAGGARVSVVRCDVTD 213

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
            A + +++   + A G +  +I+ AG+ RD LL  +  + +  V+   + G     +   
Sbjct: 214 PAALAALL-AELAAGGPLAGVIHAAGVLRDALLAELTPAAFAAVLAAKVAGALNLHELTP 272

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKA 181
                      +  +SV  L+G  GQA Y+AA A
Sbjct: 273 ----DLPLDFFVLFSSVAALLGGAGQAAYAAANA 302

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. In some instances, such as porcine FAS, an enoyl reductase (ER) module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consist of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthase uses a dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-KR, forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta-ER. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 375

>gnl|CDD|187658 cd08955, KR_2_FAS_SDR_x, beta-ketoacyl reductase (KR) domain of fatty acid synthase (FAS), subgroup 2, complex (x)

 Score = 62.3 bits (152), Expect = 3e-11
 Identities = 42/171 (24%), Positives = 73/171 (42%), Gaps = 8/171 (4%)

Query: 20  AAQNVEAPVA--VVTGASRGIGRAVATSLGKAGCKVLVNYARS--SKEAEEVCKEIEASG 75
           A      P A  ++TG   G+G  VA  L + G + LV   R   S  A +    +E +G
Sbjct: 141 APARPLRPDATYLITGGLGGLGLLVAEWLVERGARHLVLTGRRAPSAAARQAIAALEEAG 200

Query: 76  GQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLN 135
            + +    DVS    + + +     +   +  +I+ AG+  D +L      +++ V+   
Sbjct: 201 AEVVVLAADVSDRDALAAALAQIRASLPPLRGVIHAAGVLDDGVLANQDWERFRKVLAPK 260

Query: 136 LTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGL 186
           + G +   Q              +  +SV  L+G+ GQANY+AA A +  L
Sbjct: 261 VQGAWNLHQLTQ----DLPLDFFVLFSSVASLLGSPGQANYAAANAFLDAL 307

Ketoreductase, a module of the multidomain polyketide synthase, has 2 subdomains, each corresponding to a short-chain dehydrogenases/reductase (SDR) family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerizes but is composed of 2 subdomains, each resembling an SDR monomer. In some instances, as in porcine FAS, an enoyl reductase (a Rossman fold NAD binding domain of the MDR family) module is inserted between the sub-domains. The active site resembles that of typical SDRs, except that the usual positions of the catalytic asparagine and tyrosine are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular polyketide synthases are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) fatty acid synthase. In some instances, such as porcine FAS , an enoyl reductase module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consists of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthesis uses dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-ketoacyl reductase (KR), forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta-enoyl reductase (ER). Polyketide syntheses also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes the KR domain of the Lyngbya majuscule Jam J, -K, and #L which are encoded on the jam gene cluster and are involved in the synthesis of the Jamaicamides (neurotoxins); Lyngbya majuscule Jam P belongs to a different KR_FAS_SDR_x subfamily. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 376

>gnl|CDD|236229 PRK08303, PRK08303, short chain dehydrogenase; Provisional

 Score = 61.2 bits (149), Expect = 7e-11
 Identities = 60/220 (27%), Positives = 92/220 (41%), Gaps = 41/220 (18%)

Query: 23  NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEA----------EEVCKEIE 72
            +   VA+V GA+RG GR +A  LG AG  V V   RS++            EE  + + 
Sbjct: 5   PLRGKVALVAGATRGAGRGIAVELGAAGATVYVT-GRSTRARRSEYDRPETIEETAELVT 63

Query: 73  ASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVI 132
           A+GG+ +    D      V ++++      G +DIL+N+  I     L    K  W+  +
Sbjct: 64  AAGGRGIAVQVDHLVPEQVRALVERIDREQGRLDILVND--IWGGEKLFEWGKPVWEHSL 121

Query: 133 DLNL----TGVF--LCTQAAAKIMMKKKKGRIINIASVVGLVGNI--GQANYSA------ 178
           D  L      +   L T   A  ++ ++ G         GLV  I  G A Y+A      
Sbjct: 122 DKGLRMLRLAIDTHLITSHFALPLLIRRPG---------GLVVEITDGTAEYNATHYRLS 172

Query: 179 -----AKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDM 213
                AK  V  L  ++A E A       A+ PG++ S+M
Sbjct: 173 VFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEM 212

Length = 305

>gnl|CDD|180669 PRK06720, PRK06720, hypothetical protein; Provisional

 Score = 58.8 bits (142), Expect = 8e-11
 Identities = 46/149 (30%), Positives = 80/149 (53%), Gaps = 7/149 (4%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLV-NYARSSKEAEEVCKEIEASGGQALTFGGDVS 86
           VA+VTG   GIGR  A  L K G KV+V +  + S +A    +EI   GG+AL    D+ 
Sbjct: 18  VAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQA--TVEEITNLGGEALFVSYDME 75

Query: 87  KEADVESMIKTAVDAWGTVDILINNAGITR-DTLLMRMKKSQWQDVIDLNLTGVFLCTQA 145
           K+ D + +I   ++A+  +D+L  NAG+ + D++  R    Q  D   L +  V++  + 
Sbjct: 76  KQGDWQRVISITLNAFSRIDMLFQNAGLYKIDSIFSR---QQENDSNVLCINDVWIEIKQ 132

Query: 146 AAKIMMKKKKGRIINIASVVGLVGNIGQA 174
                MK+++  +++   + G++G  GQ+
Sbjct: 133 LTSSFMKQQEEVVLSDLPIFGIIGTKGQS 161

Length = 169

>gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional

 Score = 60.4 bits (147), Expect = 9e-11
 Identities = 53/207 (25%), Positives = 96/207 (46%), Gaps = 18/207 (8%)

Query: 25  EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGD 84
                ++TG S GIG   A +L   G +V      + ++ E+V   +EA G +A     D
Sbjct: 3   MKRSILITGCSSGIGAYCARALQSDGWRVFA----TCRKEEDV-AALEAEGLEAFQL--D 55

Query: 85  VSKEADVESMIKTAVD-AWGTVDILINN-----AGITRDTLLMRMKKSQWQDVIDLNLTG 138
            ++   + +++   ++ + G +D L NN      G   D L     ++Q++     N  G
Sbjct: 56  YAEPESIAALVAQVLELSGGRLDALFNNGAYGQPGAVED-LPTEALRAQFE----ANFFG 110

Query: 139 VFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRN 198
               T+    +M K+ +GRI+  +S++GLV    +  Y+A+K  + GL+ T+  E     
Sbjct: 111 WHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMKYRGAYNASKFAIEGLSLTLRMELQGSG 170

Query: 199 INVNAIAPGFIASDMTAKLGEDLEKKI 225
           I+V+ I PG I +   A      ++ I
Sbjct: 171 IHVSLIEPGPIETRFRANALAAFKRWI 197

Length = 277

>gnl|CDD|212496 cd11730, Tthb094_like_SDR_c, Tthb094 and related proteins, classical (c) SDRs

 Score = 59.5 bits (144), Expect = 1e-10
 Identities = 55/208 (26%), Positives = 95/208 (45%), Gaps = 23/208 (11%)

Query: 29  AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKE 88
           A++ GA+ GIGRA+A +L   G ++L++   +   A        A+   AL    DV+ E
Sbjct: 1   ALILGATGGIGRALARALAGRGWRLLLSGRDAGALAGL------AAEVGALARPADVAAE 54

Query: 89  ADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAK 148
            +V ++ +      G +D+L+  AG      L R K + W+ ++D NLTG  L  + A  
Sbjct: 55  LEVWALAQEL----GPLDLLVYAAGAILGKPLARTKPAAWRRILDANLTGAALVLKHAL- 109

Query: 149 IMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGF 208
             +     R++ + +   LV   G + Y+AAKA +    +   KE     + +  + P  
Sbjct: 110 -ALLAAGARLVFLGAYPELVMLPGLSAYAAAKAALEAYVEVARKEVRGLRLTL--VRPPA 166

Query: 209 IASDMTAKLG---------EDLEKKILE 227
           + + + A  G         ED+   ILE
Sbjct: 167 VDTGLWAPPGRLPKGALSPEDVAAAILE 194

Tthb094 from Thermus Thermophilus is a classical SDR which binds NADP. Members of this subgroup contain the YXXXK active site characteristic of SDRs. Also, an upstream Asn residue of the canonical catalytic tetrad is partially conserved in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 206

>gnl|CDD|187595 cd05334, DHPR_SDR_c_like, dihydropteridine reductase (DHPR), classical (c) SDRs

 Score = 59.3 bits (144), Expect = 1e-10
 Identities = 50/249 (20%), Positives = 86/249 (34%), Gaps = 37/249 (14%)

Query: 26  APVAVVTGASRGIGRAVATSLGKAGCKVL-VNYARSSKEAEEVCKEIEASGGQALTFGGD 84
           A V +V G    +G AV  +    G  V  ++ A + +    +                 
Sbjct: 1   ARVVLVYGGRGALGSAVVQAFKSRGWWVASIDLAENEEADASI------------IVLDS 48

Query: 85  VSKEADVESMIKTAVDAWGTVDILINNAG------ITRDTLLMRMKKSQWQDVIDLNLTG 138
            S     + ++ +     G VD LI  AG          + +       W  +   NL  
Sbjct: 49  DSFTEQAKQVVASVARLSGKVDALICVAGGWAGGSAKSKSFV-----KNWDLMWKQNLWT 103

Query: 139 VFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEY--AS 196
            F+ +  A K +     G ++   +   L    G   Y AAKA V  LT+++A E     
Sbjct: 104 SFIASHLATKHL--LSGGLLVLTGAKAALEPTPGMIGYGAAKAAVHQLTQSLAAENSGLP 161

Query: 197 RNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYI 256
                NAI P  + +           +K +       +   E +A L+ F A + AA   
Sbjct: 162 AGSTANAILPVTLDTPAN--------RKAMPDADFSSWTPLEFIAELILFWA-SGAARPK 212

Query: 257 TGQVLTIDG 265
           +G ++ +  
Sbjct: 213 SGSLIPVVT 221

Dihydropteridine reductase is an NAD-binding protein related to the SDRs. It converts dihydrobiopterin into tetrahydrobiopterin, a cofactor necessary in catecholamines synthesis. Dihydropteridine reductase has the YXXXK of these tyrosine-dependent oxidoreductases, but lacks the typical upstream Asn and Ser catalytic residues. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 221

>gnl|CDD|181762 PRK09291, PRK09291, short chain dehydrogenase; Provisional

 Score = 58.5 bits (142), Expect = 4e-10
 Identities = 42/179 (23%), Positives = 76/179 (42%), Gaps = 9/179 (5%)

Query: 31  VTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEAD 90
           +TGA  G GR VA  L + G  V+    + + +   +  E    G        D++   D
Sbjct: 7   ITGAGSGFGREVALRLARKGHNVIAG-VQIAPQVTALRAEAARRGLALRVEKLDLTDAID 65

Query: 91  VESMIKTAVDAWG-TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKI 149
                     A    VD+L+NNAGI     ++ +     +++ + N+ G    TQ   + 
Sbjct: 66  RAQ-------AAEWDVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRK 118

Query: 150 MMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGF 208
           M+ + KG+++  +S+ GL+       Y A+K  +  + + +  E     I V  + PG 
Sbjct: 119 MVARGKGKVVFTSSMAGLITGPFTGAYCASKHALEAIAEAMHAELKPFGIQVATVNPGP 177

Length = 257

>gnl|CDD|180838 PRK07102, PRK07102, short chain dehydrogenase; Provisional

 Score = 55.3 bits (134), Expect = 4e-09
 Identities = 55/224 (24%), Positives = 85/224 (37%), Gaps = 39/224 (17%)

Query: 31  VTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGG-DVSKEA 89
           + GA+  I RA A     AG ++ +  AR  +  E +  ++ A G  A++    D+   A
Sbjct: 6   IIGATSDIARACARRYAAAGARLYL-AARDVERLERLADDLRARGAVAVSTHELDILDTA 64

Query: 90  DVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQD------VIDLNLTGVFLCT 143
              + +          DI++   G      L      +  D          N  G     
Sbjct: 65  SHAAFLD---SLPALPDIVLIAVG-----TLGDQAACE-ADPALALREFRTNFEGPIALL 115

Query: 144 QAAAKIMMKKKKGRIINIASVVGLVGNIGQANY--SAAKAGVI----GLTKTVAKEYASR 197
              A     +  G I+ I+SV G  G    +NY   +AKA +     GL   + K     
Sbjct: 116 TLLANRFEARGSGTIVGISSVAGDRGR--ASNYVYGSAKAALTAFLSGLRNRLFK----S 169

Query: 198 NINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVA 241
            ++V  + PGF+ + MTA L          K+P     QPEEVA
Sbjct: 170 GVHVLTVKPGFVRTPMTAGL----------KLPGPLTAQPEEVA 203

Length = 243

>gnl|CDD|237099 PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 54.6 bits (132), Expect = 7e-09
 Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 8/98 (8%)

Query: 176 YSAAKAGVIGLTKTVAKE-YASRNINVNAIAPGF----IASDMTAKLGEDLEKKILEKIP 230
           Y  +K  +I  T   A+  + +R I VN +APG     I  D  + LG++      +   
Sbjct: 137 YQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSMLGQERVDSDAK--R 194

Query: 231 LGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMV 268
           +GR    +E A ++ FL  + AA +I G  L +DGG+ 
Sbjct: 195 MGRPATADEQAAVLVFLCSD-AARWINGVNLPVDGGLA 231

Length = 241

>gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional

 Score = 54.7 bits (132), Expect = 1e-08
 Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 5/87 (5%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
            A+VTG   G+G     +L +AG  V+V  AR    A E    I+      L    D++ 
Sbjct: 28  TAIVTGGYSGLGLETTRALAQAGAHVIVP-ARRPDVAREALAGIDGVEVVML----DLAD 82

Query: 88  EADVESMIKTAVDAWGTVDILINNAGI 114
              V +  +  +D+   +DILINNAG+
Sbjct: 83  LESVRAFAERFLDSGRRIDILINNAGV 109

Length = 315

>gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional

 Score = 54.2 bits (130), Expect = 1e-08
 Identities = 48/190 (25%), Positives = 84/190 (44%), Gaps = 7/190 (3%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQ---ALTFGGD 84
             +VTGAS+G+G  VA +   AG  V++  AR  K+ E+V   I  +G     A+ F   
Sbjct: 8   TILVTGASQGLGEQVAKAYAAAGATVIL-VARHQKKLEKVYDAIVEAGHPEPFAIRFDLM 66

Query: 85  VSKEADVESMIKTAVDA-WGTVDILINNAGITRDTLLMRMKK-SQWQDVIDLNLTGVFLC 142
            ++E + E    T  +A  G +D +++ AG       +  +  ++W +   +N       
Sbjct: 67  SAEEKEFEQFAATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGL 126

Query: 143 TQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYAS-RNINV 201
           T+A   ++ +     +I +    G         + A+KA +  L K  A E+    N+  
Sbjct: 127 TRALFPLLKQSPDASVIFVGESHGETPKAYWGGFGASKAALNYLCKVAADEWERFGNLRA 186

Query: 202 NAIAPGFIAS 211
           N + PG I S
Sbjct: 187 NVLVPGPINS 196

Length = 239

>gnl|CDD|135642 PRK05884, PRK05884, short chain dehydrogenase; Provisional

 Score = 52.9 bits (127), Expect = 2e-08
 Identities = 62/241 (25%), Positives = 96/241 (39%), Gaps = 31/241 (12%)

Query: 30  VVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTF-GGDVSKE 88
           +VTG    +GR +A      G KV +  AR   + E   KE++     A+     D +  
Sbjct: 4   LVTGGDTDLGRTIAEGFRNDGHKVTLVGARRD-DLEVAAKELDV---DAIVCDNTDPASL 59

Query: 89  ADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAK 148
            +   +    +D    V     +AG  R T  +    + W++ +D  +    L  Q+   
Sbjct: 60  EEARGLFPHHLDTIVNVPAPSWDAGDPR-TYSLADTANAWRNALDATVLSAVLTVQSVGD 118

Query: 149 IMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGF 208
            +  +  G II+   VV      G A  +A KA +   T   A  + +R I +NA+A G 
Sbjct: 119 HL--RSGGSIIS---VVPENPPAGSAE-AAIKAALSNWTAGQAAVFGTRGITINAVACG- 171

Query: 209 IASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLAL---NPAAGYITGQVLTIDG 265
                + + G D           G    P  VA  +  LAL    PAA +ITGQ L +  
Sbjct: 172 ----RSVQPGYD-----------GLSRTPPPVAAEIARLALFLTTPAARHITGQTLHVSH 216

Query: 266 G 266
           G
Sbjct: 217 G 217

Length = 223

>gnl|CDD|180796 PRK07023, PRK07023, short chain dehydrogenase; Provisional

 Score = 52.3 bits (126), Expect = 4e-08
 Identities = 55/198 (27%), Positives = 88/198 (44%), Gaps = 24/198 (12%)

Query: 29  AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKE 88
           A+VTG SRG+G A+A  L + G  VL   ARS   +        A+G +      D+S  
Sbjct: 4   AIVTGHSRGLGAALAEQLLQPGIAVL-GVARSRHPSLA-----AAAGERLAEVELDLSDA 57

Query: 89  ADVES-----MIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDV------IDLNLT 137
           A   +     ++   VD    V +LINNAG      +  +      D       + LN+ 
Sbjct: 58  AAAAAWLAGDLLAAFVDGASRV-LLINNAGT-----VEPIGPLATLDAAAIARAVGLNVA 111

Query: 138 GVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASR 197
              + T A A+      + RI++I+S        G + Y A KA +    + VA + A+R
Sbjct: 112 APLMLTAALAQAASDAAERRILHISSGAARNAYAGWSVYCATKAALDHHARAVALD-ANR 170

Query: 198 NINVNAIAPGFIASDMTA 215
            + + ++APG + + M A
Sbjct: 171 ALRIVSLAPGVVDTGMQA 188

Length = 243

>gnl|CDD|181198 PRK08017, PRK08017, oxidoreductase; Provisional

 Score = 52.4 bits (126), Expect = 5e-08
 Identities = 48/189 (25%), Positives = 79/189 (41%), Gaps = 14/189 (7%)

Query: 30  VVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGG---DVS 86
           ++TG S GIG   A  L + G +VL     + ++ ++V +        +L F G   D+ 
Sbjct: 6   LITGCSSGIGLEAALELKRRGYRVLA----ACRKPDDVARM------NSLGFTGILLDLD 55

Query: 87  KEADVESMIKTAVD-AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQA 145
               VE      +      +  L NNAG      L  + + Q +     N  G    T  
Sbjct: 56  DPESVERAADEVIALTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTML 115

Query: 146 AAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIA 205
               M+   +GRI+  +SV+GL+   G+  Y+A+K  +   +  +  E     I V+ I 
Sbjct: 116 LLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALEAWSDALRMELRHSGIKVSLIE 175

Query: 206 PGFIASDMT 214
           PG I +  T
Sbjct: 176 PGPIRTRFT 184

Length = 256

>gnl|CDD|187654 cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13 ketoreductase (KR), classical (c)-like SDRs

 Score = 51.0 bits (122), Expect = 1e-07
 Identities = 51/196 (26%), Positives = 91/196 (46%), Gaps = 27/196 (13%)

Query: 31  VTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEAD 90
           +TG+S G+G A A +L   G +V++ +ARS K A +        G   +  G D+S  A+
Sbjct: 12  ITGSSDGLGLAAARTLLHQGHEVVL-HARSQKRAADAKAACP--GAAGVLIG-DLSSLAE 67

Query: 91  VESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIM 150
               +   V+A G  D +I+NAGI       +   +    ++ +N+   ++ T   A I 
Sbjct: 68  TRK-LADQVNAIGRFDAVIHNAGILSGP-NRKTPDTGIPAMVAVNVLAPYVLT---ALIR 122

Query: 151 MKKKKGRIINIASVVGLVGN-------------IGQANYSAAKAGVIGLTKTVAKEYASR 197
             K   R+I ++S +   GN                  YS +K  V+ L   VA+ +  +
Sbjct: 123 RPK---RLIYLSSGMHRGGNASLDDIDWFNRGENDSPAYSDSKLHVLTLAAAVARRW--K 177

Query: 198 NINVNAIAPGFIASDM 213
           +++ NA+ PG++ + M
Sbjct: 178 DVSSNAVHPGWVPTKM 193

Daunorubicin is a clinically important therapeutic compound used in some cancer treatments. Daunorubicin C-13 ketoreductase is member of the classical SDR family with a canonical glycine-rich NAD(P)-binding motif, but lacking a complete match to the active site tetrad characteristic of this group. The critical Tyr, plus the Lys and upstream Asn are present, but the catalytic Ser is replaced, generally by Gln. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 260

>gnl|CDD|187668 cd09808, DHRS-12_like_SDR_c-like, human dehydrogenase/reductase SDR family member (DHRS)-12/FLJ13639-like, classical (c)-like SDRs

 Score = 50.7 bits (121), Expect = 2e-07
 Identities = 60/243 (24%), Positives = 106/243 (43%), Gaps = 33/243 (13%)

Query: 30  VVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGG--DVSK 87
           ++TGA+ GIG+A A ++ K G  V +   R+   AEE  KEIE   G    F    D+S 
Sbjct: 5   LITGANSGIGKAAALAIAKRGGTVHM-VCRNQTRAEEARKEIETESGNQNIFLHIVDMSD 63

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLT----GVFLCT 143
              V   ++   +    + +LINNAG       M  K+   +D ++ N      G ++ T
Sbjct: 64  PKQVWEFVEEFKEEGKKLHVLINNAGC------MVNKRELTEDGLEKNFATNTLGTYILT 117

Query: 144 QAAAKIMMKKKKGRIINIASVVGLVGNI-------------GQANYSAAKAGVIGLTKTV 190
                ++ K++  R+I ++S   LV  +             G   Y+  K   + +T+  
Sbjct: 118 THLIPVLEKEEDPRVITVSSGGMLVQKLNTNNLQSERTAFDGTMVYAQNKRQQVIMTEQW 177

Query: 191 AKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALN 250
           AK++    I+ + + PG+  +        D   +  +++        E+ A  V +LAL+
Sbjct: 178 AKKHP--EIHFSVMHPGWADTPAVRNSMPDFHARFKDRLR-----SEEQGADTVVWLALS 230

Query: 251 PAA 253
            AA
Sbjct: 231 SAA 233

Classical SDR-like subgroup containing human DHRS-12/FLJ13639, the 36K protein of zebrafish CNS myelin, and related proteins. DHRS-12/FLJ13639 is expressed in neurons and oligodendrocytes in the human cerebral cortex. Proteins in this subgroup share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 255

>gnl|CDD|180399 PRK06101, PRK06101, short chain dehydrogenase; Provisional

 Score = 48.3 bits (115), Expect = 9e-07
 Identities = 47/197 (23%), Positives = 78/197 (39%), Gaps = 26/197 (13%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
             ++TGA+ GIG+ +A    K G +V+     +    + V  E+        T   DV+ 
Sbjct: 3   AVLITGATSGIGKQLALDYAKQGWQVI-----ACGRNQSVLDELHTQSANIFTLAFDVT- 56

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITR-------DTLLMRMKKSQWQDVIDLNLTGVF 140
             D               ++ I NAG          D  LM         V ++N+ GV 
Sbjct: 57  --DHPGTKAALSQLPFIPELWIFNAGDCEYMDDGKVDATLM-------ARVFNVNVLGVA 107

Query: 141 LCTQAAAKIMMKKKKGRII-NIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNI 199
            C +     +    +  I+ +IAS + L        Y A+KA V    +T+  +   + I
Sbjct: 108 NCIEGIQPHLSCGHRVVIVGSIASELALPR---AEAYGASKAAVAYFARTLQLDLRPKGI 164

Query: 200 NVNAIAPGFIASDMTAK 216
            V  + PGF+A+ +T K
Sbjct: 165 EVVTVFPGFVATPLTDK 181

Length = 240

>gnl|CDD|181020 PRK07533, PRK07533, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 47.6 bits (114), Expect = 2e-06
 Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 3/91 (3%)

Query: 179 AKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGE--DLEKKILEKIPLGRYGQ 236
            KA +    + +A E   + I V+AI+PG + +   + + +   L +   E+ PL R   
Sbjct: 165 VKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDALLEDAAERAPLRRLVD 224

Query: 237 PEEVAGLVEFLALNPAAGYITGQVLTIDGGM 267
            ++V  +  FLA + AA  +TG  L IDGG 
Sbjct: 225 IDDVGAVAAFLA-SDAARRLTGNTLYIDGGY 254

Length = 258

>gnl|CDD|187669 cd09809, human_WWOX_like_SDR_c-like, human WWOX (WW domain-containing oxidoreductase)-like, classical (c)-like SDRs

 Score = 47.2 bits (112), Expect = 2e-06
 Identities = 39/203 (19%), Positives = 79/203 (38%), Gaps = 27/203 (13%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLV---NYARSSKEAEEVCKEIEASGGQALTFGGD 84
           V ++TGA+ GIG   A S    G  V++   N +R+S     + +E   +  +A+T   D
Sbjct: 3   VIIITGANSGIGFETARSFALHGAHVILACRNMSRASAAVSRILEEWHKARVEAMTL--D 60

Query: 85  VSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQ 144
           ++    V+   +        + +L+ NA +    L   + +   +    +N  G F   Q
Sbjct: 61  LASLRSVQRFAEAFKAKNSPLHVLVCNAAVF--ALPWTLTEDGLETTFQVNHLGHFYLVQ 118

Query: 145 AAAKIMMKKKKGRIINIASVVGLVGNIGQAN--------------------YSAAKAGVI 184
               ++ +    R+I ++S      ++  +                     Y+ AK   I
Sbjct: 119 LLEDVLRRSAPARVIVVSSESHRFTDLPDSCGNLDFSLLSPPKKKYWSMLAYNRAKLCNI 178

Query: 185 GLTKTVAKEYASRNINVNAIAPG 207
             +  + +  + R I  N++ PG
Sbjct: 179 LFSNELHRRLSPRGITSNSLHPG 201

Classical-like SDR domain of human WWOX and related proteins. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 284

>gnl|CDD|235627 PRK05854, PRK05854, short chain dehydrogenase; Provisional

 Score = 45.1 bits (107), Expect = 1e-05
 Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 3/88 (3%)

Query: 29  AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQA-LTFGG-DVS 86
           AVVTGAS G+G  +A  L  AG +V++   R+  + E     I  +   A L+    D+S
Sbjct: 17  AVVTGASDGLGLGLARRLAAAGAEVILP-VRNRAKGEAAVAAIRTAVPDAKLSLRALDLS 75

Query: 87  KEADVESMIKTAVDAWGTVDILINNAGI 114
             A V ++ +        + +LINNAG+
Sbjct: 76  SLASVAALGEQLRAEGRPIHLLINNAGV 103

Length = 313

>gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional

 Score = 43.9 bits (104), Expect = 4e-05
 Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 13/94 (13%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVS- 86
           VAVVTGA+ G+G   A +L   G  V V   R+  + +     I A+     T G DV+ 
Sbjct: 18  VAVVTGANTGLGYETAAALAAKGAHV-VLAVRNLDKGKAAAARITAA-----TPGADVTL 71

Query: 87  KEADVESM--IKTAVDAWGT----VDILINNAGI 114
           +E D+ S+  ++ A DA       +D+LINNAG+
Sbjct: 72  QELDLTSLASVRAAADALRAAYPRIDLLINNAGV 105

Length = 306

>gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs

 Score = 43.4 bits (103), Expect = 5e-05
 Identities = 23/91 (25%), Positives = 36/91 (39%), Gaps = 10/91 (10%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           V  V GA+  IGR V   L K G +V+V Y   +     +        GQ L    D+  
Sbjct: 2   VVTVFGATGFIGRYVVNRLAKRGSQVIVPYRCEAYARRLLVM---GDLGQVLFVEFDLRD 58

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDT 118
           +  +   ++         D++IN  G   +T
Sbjct: 59  DESIRKALE-------GSDVVINLVGRLYET 82

This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273

>gnl|CDD|236342 PRK08862, PRK08862, short chain dehydrogenase; Provisional

 Score = 42.4 bits (100), Expect = 8e-05
 Identities = 42/194 (21%), Positives = 70/194 (36%), Gaps = 37/194 (19%)

Query: 31  VTGASRGIGRAVATSLGKAGCKVLVNYARSS--KEAEEVCKEIEASGGQALTFGGDVSK- 87
           +T A   +GR ++    + G  +++     S  K+  E C               +V   
Sbjct: 10  ITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSA----------LTDNVYSF 59

Query: 88  --EADVESMIKTAVDAW-----GTVDILINN-AGITRDTLLMRMKKSQWQDVIDLNLTGV 139
             +   +  I+   DA         D+L+NN       +L        +   +    + +
Sbjct: 60  QLKDFSQESIRHLFDAIEQQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTL 119

Query: 140 FLCTQAAAKIMMK-KKKGRIINIAS------VVGLVGNIGQANYSAAKAGVIGLTKTVAK 192
           F   Q AA+ M K  KKG I+N+ S      + G+           + A V G T + AK
Sbjct: 120 FTYGQVAAERMRKRNKKGVIVNVISHDDHQDLTGVES---------SNALVSGFTHSWAK 170

Query: 193 EYASRNINVNAIAP 206
           E    NI V  + P
Sbjct: 171 ELTPFNIRVGGVVP 184

Length = 227

>gnl|CDD|187645 cd08941, 3KS_SDR_c, 3-keto steroid reductase, classical (c) SDRs

 Score = 42.0 bits (99), Expect = 2e-04
 Identities = 27/96 (28%), Positives = 40/96 (41%), Gaps = 8/96 (8%)

Query: 27  PVAVVTGASRGIGRAVATSL--GKAGCKVL--VNYARSSKEAEEVCKEIEASGGQALTFG 82
            V +VTGA+ G+G A+   L         L  +   R+ + AE  C+ + AS   A    
Sbjct: 2   KVVLVTGANSGLGLAICERLLAEDDENPELTLILACRNLQRAEAACRALLASHPDARVVF 61

Query: 83  G----DVSKEADVESMIKTAVDAWGTVDILINNAGI 114
                D+S    V +  K     +  +D L  NAGI
Sbjct: 62  DYVLVDLSNMVSVFAAAKELKKRYPRLDYLYLNAGI 97

3-keto steroid reductase (in concert with other enzymes) catalyzes NADP-dependent sterol C-4 demethylation, as part of steroid biosynthesis. 3-keto reductase is a classical SDR, with a well conserved canonical active site tetrad and fairly well conserved characteristic NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 290

>gnl|CDD|235776 PRK06300, PRK06300, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 41.0 bits (96), Expect = 3e-04
 Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 4/94 (4%)

Query: 177 SAAKAGVIGLTKTVAKEYASR-NINVNAIAPGFIASDMTAKLG--EDLEKKILEKIPLGR 233
           S+AKA +   TK +A E   R  I VN I+ G +AS     +G  E +     +  PL  
Sbjct: 193 SSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIGFIERMVDYYQDWAPLPE 252

Query: 234 YGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM 267
             + E+V     FL  +P A  ITG+ L +D G 
Sbjct: 253 PMEAEQVGAAAAFLV-SPLASAITGETLYVDHGA 285

Length = 299

>gnl|CDD|180596 PRK06505, PRK06505, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 37.8 bits (88), Expect = 0.004
 Identities = 52/216 (24%), Positives = 89/216 (41%), Gaps = 33/216 (15%)

Query: 69  KEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQW 128
           K +  S G       DV   A V+++ +     WG +D +++  G +    L    K ++
Sbjct: 50  KPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGKLDFVVHAIGFSDKNEL----KGRY 105

Query: 129 QDVIDLNL--TGVFLC------TQAAAKIMMKKKKGRIINIASVVGLVGNIGQ---ANYS 177
            D    N   T V  C       + AAK+M         +  S++ L          NY+
Sbjct: 106 ADTTRENFSRTMVISCFSFTEIAKRAAKLMP--------DGGSMLTLTYGGSTRVMPNYN 157

Query: 178 A---AKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKIL----EKIP 230
               AKA +    + +A +Y  + I VNAI+ G + +   A +G+   + I        P
Sbjct: 158 VMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGD--ARAIFSYQQRNSP 215

Query: 231 LGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGG 266
           L R    +EV G   +L L+  +  +TG++  +D G
Sbjct: 216 LRRTVTIDEVGGSALYL-LSDLSSGVTGEIHFVDSG 250

Length = 271

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	269
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	100.0
PRK08339	263	short chain dehydrogenase; Provisional	100.0
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK05867	253	short chain dehydrogenase; Provisional	100.0
PRK07063	260	short chain dehydrogenase; Provisional	100.0
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	100.0
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	100.0
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06114	254	short chain dehydrogenase; Provisional	100.0
PRK07478	254	short chain dehydrogenase; Provisional	100.0
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08085	254	gluconate 5-dehydrogenase; Provisional	100.0
PRK07062	265	short chain dehydrogenase; Provisional	100.0
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08589	272	short chain dehydrogenase; Validated	100.0
PRK06172	253	short chain dehydrogenase; Provisional	100.0
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	100.0
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	100.0
KOG0725	270	consensus Reductases with broad range of substrate	100.0
PRK08277	278	D-mannonate oxidoreductase; Provisional	100.0
PRK07791	286	short chain dehydrogenase; Provisional	100.0
COG0300	265	DltE Short-chain dehydrogenases of various substra	100.0
PRK12747	252	short chain dehydrogenase; Provisional	100.0
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK08340	259	glucose-1-dehydrogenase; Provisional	100.0
PRK07035	252	short chain dehydrogenase; Provisional	100.0
PRK07523	255	gluconate 5-dehydrogenase; Provisional	100.0
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08265	261	short chain dehydrogenase; Provisional	100.0
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	100.0
PRK07985	294	oxidoreductase; Provisional	100.0
PRK12743	256	oxidoreductase; Provisional	100.0
PRK08936	261	glucose-1-dehydrogenase; Provisional	100.0
PRK08643	256	acetoin reductase; Validated	100.0
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06398	258	aldose dehydrogenase; Validated	100.0
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	100.0
PRK07097	265	gluconate 5-dehydrogenase; Provisional	100.0
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	100.0
PRK12938	246	acetyacetyl-CoA reductase; Provisional	100.0
PRK08226	263	short chain dehydrogenase; Provisional	100.0
PRK06128	300	oxidoreductase; Provisional	100.0
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	100.0
PRK07831	262	short chain dehydrogenase; Provisional	100.0
PRK06125	259	short chain dehydrogenase; Provisional	100.0
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	100.0
PRK06124	256	gluconate 5-dehydrogenase; Provisional	100.0
PRK09242	257	tropinone reductase; Provisional	100.0
PRK08303	305	short chain dehydrogenase; Provisional	100.0
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06841	255	short chain dehydrogenase; Provisional	100.0
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	100.0
PRK07677	252	short chain dehydrogenase; Provisional	100.0
PLN02253	280	xanthoxin dehydrogenase	100.0
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	100.0
PRK12939	250	short chain dehydrogenase; Provisional	100.0
PRK07067	257	sorbitol dehydrogenase; Provisional	100.0
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07856	252	short chain dehydrogenase; Provisional	100.0
PRK12935	247	acetoacetyl-CoA reductase; Provisional	100.0
PRK12937	245	short chain dehydrogenase; Provisional	100.0
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	100.0
PRK07576	264	short chain dehydrogenase; Provisional	100.0
PRK07890	258	short chain dehydrogenase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK06523	260	short chain dehydrogenase; Provisional	100.0
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK08213	259	gluconate 5-dehydrogenase; Provisional	100.0
PRK06940	275	short chain dehydrogenase; Provisional	100.0
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	100.0
PRK06949	258	short chain dehydrogenase; Provisional	100.0
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	100.0
PRK06483	236	dihydromonapterin reductase; Provisional	100.0
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	100.0
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	100.0
PRK08628	258	short chain dehydrogenase; Provisional	100.0
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	100.0
PRK12824	245	acetoacetyl-CoA reductase; Provisional	100.0
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	100.0
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK06701	290	short chain dehydrogenase; Provisional	100.0
TIGR02415	254	23BDH acetoin reductases. One member of this famil	100.0
PRK12742	237	oxidoreductase; Provisional	100.0
PRK05717	255	oxidoreductase; Validated	100.0
PRK06138	252	short chain dehydrogenase; Provisional	100.0
PRK06139	330	short chain dehydrogenase; Provisional	100.0
PRK07814	263	short chain dehydrogenase; Provisional	100.0
PRK06500	249	short chain dehydrogenase; Provisional	100.0
PRK08278	273	short chain dehydrogenase; Provisional	100.0
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	100.0
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	100.0
PRK06947	248	glucose-1-dehydrogenase; Provisional	100.0
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK12744	257	short chain dehydrogenase; Provisional	100.0
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	100.0
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	100.0
PRK12746	254	short chain dehydrogenase; Provisional	100.0
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK08862	227	short chain dehydrogenase; Provisional	100.0
PRK07069	251	short chain dehydrogenase; Validated	100.0
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07774	250	short chain dehydrogenase; Provisional	100.0
PRK06123	248	short chain dehydrogenase; Provisional	100.0
PRK05872	296	short chain dehydrogenase; Provisional	100.0
PRK09186	256	flagellin modification protein A; Provisional	100.0
PRK09134	258	short chain dehydrogenase; Provisional	100.0
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK06198	260	short chain dehydrogenase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK06057	255	short chain dehydrogenase; Provisional	100.0
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	100.0
PRK05875	276	short chain dehydrogenase; Provisional	100.0
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	100.0
PRK05876	275	short chain dehydrogenase; Provisional	100.0
PRK12827	249	short chain dehydrogenase; Provisional	100.0
PRK07109	334	short chain dehydrogenase; Provisional	100.0
PRK05599	246	hypothetical protein; Provisional	100.0
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK05884	223	short chain dehydrogenase; Provisional	100.0
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07060	245	short chain dehydrogenase; Provisional	100.0
PRK08703	239	short chain dehydrogenase; Provisional	100.0
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	100.0
PRK07074	257	short chain dehydrogenase; Provisional	100.0
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	100.0
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07825	273	short chain dehydrogenase; Provisional	100.0
PRK06182	273	short chain dehydrogenase; Validated	100.0
PRK07454	241	short chain dehydrogenase; Provisional	100.0
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	100.0
PLN00015	308	protochlorophyllide reductase	100.0
PRK07832	272	short chain dehydrogenase; Provisional	100.0
PRK07577	234	short chain dehydrogenase; Provisional	100.0
PRK05866	293	short chain dehydrogenase; Provisional	100.0
PRK12829	264	short chain dehydrogenase; Provisional	100.0
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	100.0
PRK08263	275	short chain dehydrogenase; Provisional	100.0
PRK12828	239	short chain dehydrogenase; Provisional	100.0
PRK05855	582	short chain dehydrogenase; Validated	100.0
PRK05650	270	short chain dehydrogenase; Provisional	100.0
PRK05854	313	short chain dehydrogenase; Provisional	100.0
PRK09135	249	pteridine reductase; Provisional	100.0
PRK07775	274	short chain dehydrogenase; Provisional	100.0
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	100.0
COG1028	251	FabG Dehydrogenases with different specificities (	100.0
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06196	315	oxidoreductase; Provisional	100.0
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	100.0
PRK08324	681	short chain dehydrogenase; Validated	100.0
PLN02780	320	ketoreductase/ oxidoreductase	100.0
PRK06180	277	short chain dehydrogenase; Provisional	100.0
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	100.0
PRK06197	306	short chain dehydrogenase; Provisional	100.0
PRK07041	230	short chain dehydrogenase; Provisional	100.0
PRK05993	277	short chain dehydrogenase; Provisional	100.0
PRK07024	257	short chain dehydrogenase; Provisional	100.0
PRK06194	287	hypothetical protein; Provisional	100.0
PRK09072	263	short chain dehydrogenase; Provisional	100.0
PRK07806	248	short chain dehydrogenase; Provisional	100.0
PRK06914	280	short chain dehydrogenase; Provisional	100.0
PRK09009	235	C factor cell-cell signaling protein; Provisional	100.0
KOG1208	314	consensus Dehydrogenases with different specificit	100.0
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	100.0
PRK06924	251	short chain dehydrogenase; Provisional	100.0
PRK10538	248	malonic semialdehyde reductase; Provisional	100.0
PRK07904	253	short chain dehydrogenase; Provisional	100.0
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	100.0
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	100.0
PRK08267	260	short chain dehydrogenase; Provisional	100.0
PRK06179	270	short chain dehydrogenase; Provisional	100.0
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	100.0
PRK08251	248	short chain dehydrogenase; Provisional	100.0
PRK06482	276	short chain dehydrogenase; Provisional	100.0
PRK05693	274	short chain dehydrogenase; Provisional	100.0
PRK06181	263	short chain dehydrogenase; Provisional	100.0
PRK07453	322	protochlorophyllide oxidoreductase; Validated	100.0
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07102	243	short chain dehydrogenase; Provisional	100.0
PRK07578	199	short chain dehydrogenase; Provisional	100.0
KOG1611	249	consensus Predicted short chain-type dehydrogenase	100.0
PRK07326	237	short chain dehydrogenase; Provisional	100.0
PRK07201	657	short chain dehydrogenase; Provisional	100.0
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	100.0
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	100.0
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	100.0
PRK07023	243	short chain dehydrogenase; Provisional	100.0
PRK06101	240	short chain dehydrogenase; Provisional	100.0
PRK09291	257	short chain dehydrogenase; Provisional	100.0
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.98
PRK08264	238	short chain dehydrogenase; Validated	99.97
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.97
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.97
PRK08017	256	oxidoreductase; Provisional	99.97
PRK08177	225	short chain dehydrogenase; Provisional	99.97
PRK12367	245	short chain dehydrogenase; Provisional	99.96
PRK08219	227	short chain dehydrogenase; Provisional	99.96
PRK06953	222	short chain dehydrogenase; Provisional	99.96
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.95
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.94
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.93
PLN03209	576	translocon at the inner envelope of chloroplast su	99.92
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.92
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.92
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.91
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.9
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.9
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.89
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.88
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.88
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.86
PLN02583	297	cinnamoyl-CoA reductase	99.86
PLN02653	340	GDP-mannose 4,6-dehydratase	99.86
PLN02214	342	cinnamoyl-CoA reductase	99.86
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.86
PRK06720	169	hypothetical protein; Provisional	99.85
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.85
PLN02650	351	dihydroflavonol-4-reductase	99.84
PLN02572	442	UDP-sulfoquinovose synthase	99.84
PLN00198	338	anthocyanidin reductase; Provisional	99.84
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.83
PLN02240	352	UDP-glucose 4-epimerase	99.82
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.82
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.81
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.81
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.8
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.8
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.8
PLN02686	367	cinnamoyl-CoA reductase	99.8
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.79
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.79
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.78
PLN02427	386	UDP-apiose/xylose synthase	99.77
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.77
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.76
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.75
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.75
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.72
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.71
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.7
PLN02260	668	probable rhamnose biosynthetic enzyme	99.68
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.68
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.68
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.67
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.67
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.66
PLN02206	442	UDP-glucuronate decarboxylase	99.65
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.65
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.64
CHL00194	317	ycf39 Ycf39; Provisional	99.62
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.62
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.6
PLN02996	491	fatty acyl-CoA reductase	99.59
PRK07201	657	short chain dehydrogenase; Provisional	99.57
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	99.55
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.54
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.54
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.53
PRK05865	854	hypothetical protein; Provisional	99.52
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.5
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.47
PLN02778	298	3,5-epimerase/4-reductase	99.44
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.43
PRK08309	177	short chain dehydrogenase; Provisional	99.37
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.36
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	99.35
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.32
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.32
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.3
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.28
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.28
PLN02503	605	fatty acyl-CoA reductase 2	99.27
PLN00016	378	RNA-binding protein; Provisional	99.26
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.26
PRK12320	699	hypothetical protein; Provisional	99.26
PLN02260	668	probable rhamnose biosynthetic enzyme	99.23
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	99.19
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	99.17
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.02
COG4982	866	3-oxoacyl-[acyl-carrier protein]	98.97
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	98.94
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	98.8
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.78
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.76
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	98.73
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.72
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.63
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	98.62
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	98.62
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	98.62
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.58
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.5
COG2910	211	Putative NADH-flavin reductase [General function p	98.44
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	98.43
PRK09620	229	hypothetical protein; Provisional	98.26
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	98.25
PLN00106	323	malate dehydrogenase	98.24
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.19
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.18
PRK14982	340	acyl-ACP reductase; Provisional	98.18
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.15
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.14
PTZ00325	321	malate dehydrogenase; Provisional	98.05
KOG2733	423	consensus Uncharacterized membrane protein [Functi	97.83
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.81
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	97.72
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	97.72
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	97.67
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.66
KOG2774	366	consensus NAD dependent epimerase [General functio	97.64
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.63
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.51
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.49
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.43
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.42
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	97.37
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.34
PRK06849	389	hypothetical protein; Provisional	97.32
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	97.28
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.27
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	97.25
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	97.23
COG3007	398	Uncharacterized paraquat-inducible protein B [Func	97.23
PRK15116	268	sulfur acceptor protein CsdL; Provisional	97.23
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	97.19
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.18
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	97.14
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.13
PRK05086	312	malate dehydrogenase; Provisional	97.12
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	97.09
PRK08306	296	dipicolinate synthase subunit A; Reviewed	97.07
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.05
COG3268	382	Uncharacterized conserved protein [Function unknow	97.05
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	97.05
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.04
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	97.03
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	96.99
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	96.98
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.95
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.91
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.89
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	96.88
PRK14968	188	putative methyltransferase; Provisional	96.86
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	96.85
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	96.84
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	96.83
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	96.83
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	96.82
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	96.73
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	96.71
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	96.71
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.7
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	96.69
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	96.69
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.67
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	96.65
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	96.65
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.64
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.63
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	96.63
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.62
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	96.61
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.61
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.58
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	96.57
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.55
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	96.48
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.43
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	96.42
COG2130	340	Putative NADP-dependent oxidoreductases [General f	96.42
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	96.41
PLN00203	519	glutamyl-tRNA reductase	96.41
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	96.4
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	96.36
PRK08655	437	prephenate dehydrogenase; Provisional	96.35
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	96.35
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.34
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.31
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	96.3
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.28
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	96.28
PRK07574	385	formate dehydrogenase; Provisional	96.25
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.24
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.17
PRK09496	453	trkA potassium transporter peripheral membrane com	96.16
KOG4288	283	consensus Predicted oxidoreductase [General functi	96.16
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	96.13
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	96.12
COG0569	225	TrkA K+ transport systems, NAD-binding component [	96.1
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.08
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	96.07
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	96.06
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	96.03
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	95.99
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	95.88
PLN02494	477	adenosylhomocysteinase	95.88
PLN00112	444	malate dehydrogenase (NADP); Provisional	95.85
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	95.84
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	95.82
PLN02827	378	Alcohol dehydrogenase-like	95.82
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	95.81
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	95.76
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	95.75
PLN02928	347	oxidoreductase family protein	95.74
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	95.74
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	95.74
PLN02178	375	cinnamyl-alcohol dehydrogenase	95.72
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	95.71
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	95.7
PLN02586	360	probable cinnamyl alcohol dehydrogenase	95.69
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	95.64
PTZ00075	476	Adenosylhomocysteinase; Provisional	95.61
PRK06719	157	precorrin-2 dehydrogenase; Validated	95.61
PRK08223	287	hypothetical protein; Validated	95.58
PRK08328	231	hypothetical protein; Provisional	95.57
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	95.56
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	95.55
PF12076	164	Wax2_C: WAX2 C-terminal domain; InterPro: IPR02194	95.55
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	95.49
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	95.48
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	95.46
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	95.46
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.43
PRK00141	473	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.43
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	95.39
COG2263	198	Predicted RNA methylase [Translation, ribosomal st	95.36
PRK04148	134	hypothetical protein; Provisional	95.35
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	95.34
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	95.32
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	95.27
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	95.26
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	95.23
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	95.23
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	95.15
PTZ00117	319	malate dehydrogenase; Provisional	95.14
TIGR01202	308	bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl	95.13
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	95.1
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	95.07
PRK09496	453	trkA potassium transporter peripheral membrane com	95.07
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	95.05
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	95.04
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	95.03
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.03
PRK05442	326	malate dehydrogenase; Provisional	95.02
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	95.02
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	95.0
PRK02006	498	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.98
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	94.97
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	94.93
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	94.91
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	94.9
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	94.9
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	94.87
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	94.85
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	94.85
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	94.84
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	94.82
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	94.82
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	94.81
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	94.81
PLN02306	386	hydroxypyruvate reductase	94.77
PLN02514	357	cinnamyl-alcohol dehydrogenase	94.77
PRK12480	330	D-lactate dehydrogenase; Provisional	94.69
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.67
cd08278	365	benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be	94.65
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	94.65
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	94.63
PRK13256	226	thiopurine S-methyltransferase; Reviewed	94.58
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	94.57
PLN02740	381	Alcohol dehydrogenase-like	94.57
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	94.55
PRK14851	679	hypothetical protein; Provisional	94.53
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	94.48
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	94.48
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	94.47
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	94.46
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	94.45
PRK07411	390	hypothetical protein; Validated	94.42
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	94.39
PLN02602	350	lactate dehydrogenase	94.34
PTZ00354	334	alcohol dehydrogenase; Provisional	94.34
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	94.33
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	94.32
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	94.27
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	94.27
PRK13243	333	glyoxylate reductase; Reviewed	94.24
PRK06141	314	ornithine cyclodeaminase; Validated	94.23

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=100.00  E-value=8.4e-50  Score=306.76  Aligned_cols=245  Identities=49%  Similarity=0.759  Sum_probs=227.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      ..+..|+++||||++|||+++++.|+++|++|++ ..++.+..++....+... .+-..+.||+++..+++..+++..+.
T Consensus        10 ~r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v-~dl~~~~A~ata~~L~g~-~~h~aF~~DVS~a~~v~~~l~e~~k~   87 (256)
T KOG1200|consen   10 QRLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAV-ADLDSAAAEATAGDLGGY-GDHSAFSCDVSKAHDVQNTLEEMEKS   87 (256)
T ss_pred             HHHhcceeEEecCCchHHHHHHHHHHhcCcEEEE-eecchhhHHHHHhhcCCC-CccceeeeccCcHHHHHHHHHHHHHh
Confidence            4566799999999999999999999999999998 577777888888777543 34557899999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHH--hCCCCeEEEEcCCccccCCCCChhhHHh
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMM--KKKKGRIINIASVVGLVGNIGQANYSAA  179 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~--~~~~~~iv~isS~~~~~~~~~~~~Y~~s  179 (269)
                      ++++++||||||+..+..+..++.++|++.+.+|+.|.|..+|++...|.  .+++.+|||+||+.+..+.-++.-|+++
T Consensus        88 ~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQtnYAAs  167 (256)
T KOG1200|consen   88 LGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQTNYAAS  167 (256)
T ss_pred             cCCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccchhhhhh
Confidence            99999999999999999999999999999999999999999999999854  3445699999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCcccc
Q 024338          180 KAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQ  259 (269)
Q Consensus       180 K~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~  259 (269)
                      |+.+.+|+++.|+|++++|||||.|.||++.|||+...+++..+.....+|++++..+||+|+.++||+ ++.++++||+
T Consensus       168 K~GvIgftktaArEla~knIrvN~VlPGFI~tpMT~~mp~~v~~ki~~~iPmgr~G~~EevA~~V~fLA-S~~ssYiTG~  246 (256)
T KOG1200|consen  168 KGGVIGFTKTAARELARKNIRVNVVLPGFIATPMTEAMPPKVLDKILGMIPMGRLGEAEEVANLVLFLA-SDASSYITGT  246 (256)
T ss_pred             cCceeeeeHHHHHHHhhcCceEeEeccccccChhhhhcCHHHHHHHHccCCccccCCHHHHHHHHHHHh-ccccccccce
Confidence            999999999999999999999999999999999999999999999999999999999999999999999 7889999999


Q ss_pred             EEEecCCccC
Q 024338          260 VLTIDGGMVM  269 (269)
Q Consensus       260 ~i~~dgg~~~  269 (269)
                      .+.++||+.|
T Consensus       247 t~evtGGl~m  256 (256)
T KOG1200|consen  247 TLEVTGGLAM  256 (256)
T ss_pred             eEEEeccccC
Confidence            9999999865

>PRK08339 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.8e-48  Score=324.93  Aligned_cols=245  Identities=31%  Similarity=0.471  Sum_probs=218.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHc-CCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS-GGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      +++++|++|||||++|||+++|+.|+++|++|++ .+|+.+.++++.+++.+. +.++.++.+|++|+++++++++++. 
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~-   81 (263)
T PRK08339          4 IDLSGKLAFTTASSKGIGFGVARVLARAGADVIL-LSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELK-   81 (263)
T ss_pred             cCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHH-
Confidence            4578999999999999999999999999999888 588888888888777654 4578899999999999999999986 


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhH
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                      .++++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|+++|
T Consensus        82 ~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~~~~~y~asK  161 (263)
T PRK08339         82 NIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIPNIALSNVVR  161 (263)
T ss_pred             hhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCCcchhhHHHH
Confidence            58999999999998766778889999999999999999999999999999888889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC-----------hHHHHHHHhcCCCCCCCCHHHHHHHHHHhcc
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG-----------EDLEKKILEKIPLGRYGQPEEVAGLVEFLAL  249 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~  249 (269)
                      +|+++|+++++.|++++|||||+|+||+++|++.....           ++..+......|++++.+|+|+|+++.||+ 
T Consensus       162 aal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~fL~-  240 (263)
T PRK08339        162 ISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEPEEIGYLVAFLA-  240 (263)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccCCcccCcCHHHHHHHHHHHh-
Confidence            99999999999999999999999999999999754321           222334455678899999999999999999 


Q ss_pred             CCCCCCccccEEEecCCccC
Q 024338          250 NPAAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       250 ~~~~~~~~G~~i~~dgg~~~  269 (269)
                      +++++++||+++.+|||+.+
T Consensus       241 s~~~~~itG~~~~vdgG~~~  260 (263)
T PRK08339        241 SDLGSYINGAMIPVDGGRLN  260 (263)
T ss_pred             cchhcCccCceEEECCCccc
Confidence            56778999999999999863

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=2e-46  Score=314.89  Aligned_cols=243  Identities=40%  Similarity=0.682  Sum_probs=213.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      +++++|++|||||++|||+++|++|+++|++|+++ .|+..  ++..++++..+.++.++.+|++|+++++++++++.+.
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~-~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (251)
T PRK12481          4 FDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGV-GVAEA--PETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEV   80 (251)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEe-cCchH--HHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999884 55432  3344455555678889999999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCeEEEEcCCccccCCCCChhhHHhH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK-KGRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                      ++++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|.|.+++ +|+||++||..+..+.++...|++||
T Consensus        81 ~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asK  160 (251)
T PRK12481         81 MGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTASK  160 (251)
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCCcchHHHH
Confidence            99999999999987777788899999999999999999999999999997654 58999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC--hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccc
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG--EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITG  258 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G  258 (269)
                      +++++|+++++.|+++.||+||+|+||+++|++.....  +...+......|.+++.+|+|+|+++.||+ ++.+.+++|
T Consensus       161 ~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~peeva~~~~~L~-s~~~~~~~G  239 (251)
T PRK12481        161 SAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADTARNEAILERIPASRWGTPDDLAGPAIFLS-SSASDYVTG  239 (251)
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHh-CccccCcCC
Confidence            99999999999999999999999999999999865432  222334456778889999999999999999 567789999


Q ss_pred             cEEEecCCcc
Q 024338          259 QVLTIDGGMV  268 (269)
Q Consensus       259 ~~i~~dgg~~  268 (269)
                      ++|.+|||+.
T Consensus       240 ~~i~vdgg~~  249 (251)
T PRK12481        240 YTLAVDGGWL  249 (251)
T ss_pred             ceEEECCCEe
Confidence            9999999975

>PRK05867 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.8e-46  Score=313.42  Aligned_cols=245  Identities=41%  Similarity=0.604  Sum_probs=217.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      +++++|++|||||++|||.+++++|+++|++|++ ++|+.+.++++.++++..+.++..+.+|++|+++++++++++.+.
T Consensus         5 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (253)
T PRK05867          5 FDLHGKRALITGASTGIGKRVALAYVEAGAQVAI-AARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAE   83 (253)
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEE-EcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999888 588888888888888776778889999999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCeEEEEcCCccccCC-C-CChhhHH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK-KGRIINIASVVGLVGN-I-GQANYSA  178 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~-~-~~~~Y~~  178 (269)
                      ++++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|.+++ .++||++||..+..+. + ....|++
T Consensus        84 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~Y~a  163 (253)
T PRK05867         84 LGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCA  163 (253)
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCCCCccchHH
Confidence            99999999999987777788899999999999999999999999999997654 5799999999886543 3 4578999


Q ss_pred             hHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccc
Q 024338          179 AKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITG  258 (269)
Q Consensus       179 sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G  258 (269)
                      ||+++++|+++++.|++++||+||+|+||+++|++.....+ ..+......|.+++.+|+|+|++++||+ +++++++||
T Consensus       164 sKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~~-~~~~~~~~~~~~r~~~p~~va~~~~~L~-s~~~~~~tG  241 (253)
T PRK05867        164 SKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYTE-YQPLWEPKIPLGRLGRPEELAGLYLYLA-SEASSYMTG  241 (253)
T ss_pred             HHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccchH-HHHHHHhcCCCCCCcCHHHHHHHHHHHc-CcccCCcCC
Confidence            99999999999999999999999999999999998765432 2334445678899999999999999999 567889999


Q ss_pred             cEEEecCCccC
Q 024338          259 QVLTIDGGMVM  269 (269)
Q Consensus       259 ~~i~~dgg~~~  269 (269)
                      |+|.+|||+.+
T Consensus       242 ~~i~vdgG~~~  252 (253)
T PRK05867        242 SDIVIDGGYTC  252 (253)
T ss_pred             CeEEECCCccC
Confidence            99999999863

>PRK07063 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.7e-46  Score=314.65  Aligned_cols=246  Identities=35%  Similarity=0.550  Sum_probs=219.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHH--cCCcEEEEEccCCCHHHHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEA--SGGQALTFGGDVSKEADVESMIKTAV   99 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~--~~~~~~~~~~Dls~~~~~~~~~~~~~   99 (269)
                      .++++|+++||||++|||++++++|+++|++|++ ..|+++.++++.+++..  .+.++.++++|++|+++++++++++.
T Consensus         3 ~~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   81 (260)
T PRK07063          3 NRLAGKVALVTGAAQGIGAAIARAFAREGAAVAL-ADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAE   81 (260)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            4578999999999999999999999999999888 57888888888888876  35678899999999999999999999


Q ss_pred             HhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHh
Q 024338          100 DAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAA  179 (269)
Q Consensus       100 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  179 (269)
                      +.++++|++|||||.....+..+.+.++|++.+++|+.+++.++++++|.|.+++.++||++||..+..+.++...|++|
T Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  161 (260)
T PRK07063         82 EAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGCFPYPVA  161 (260)
T ss_pred             HHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCCchHHHHH
Confidence            99999999999999876666677889999999999999999999999999988778999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC------hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCC
Q 024338          180 KAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG------EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAA  253 (269)
Q Consensus       180 K~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~  253 (269)
                      |++++.|+++++.|+++.||+||+|+||+++|++.....      ....+...+..|++++.+|+|+|++++||+ ++++
T Consensus       162 Kaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~va~~~~fl~-s~~~  240 (260)
T PRK07063        162 KHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPMKRIGRPEEVAMTAVFLA-SDEA  240 (260)
T ss_pred             HHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCCCCCCCHHHHHHHHHHHc-Cccc
Confidence            999999999999999999999999999999999864321      112233445678899999999999999999 5677


Q ss_pred             CCccccEEEecCCccC
Q 024338          254 GYITGQVLTIDGGMVM  269 (269)
Q Consensus       254 ~~~~G~~i~~dgg~~~  269 (269)
                      .++||++|.+|||+.+
T Consensus       241 ~~itG~~i~vdgg~~~  256 (260)
T PRK07063        241 PFINATCITIDGGRSV  256 (260)
T ss_pred             cccCCcEEEECCCeee
Confidence            8999999999999753

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3e-46  Score=317.01  Aligned_cols=241  Identities=19%  Similarity=0.280  Sum_probs=204.5

Q ss_pred             CCCCCEEEEeCCCC--chHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           23 NVEAPVAVVTGASR--GIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        23 ~~~~k~vlItGas~--giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      .+++|++|||||++  |||+++|++|+++|++|++. .|+.+..+++.+...+.+ ....+++|++|.++++++++++.+
T Consensus         4 ~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~-~r~~~~~~~~~~~~~~~g-~~~~~~~Dv~d~~~v~~~~~~~~~   81 (271)
T PRK06505          4 LMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFT-YQGEALGKRVKPLAESLG-SDFVLPCDVEDIASVDAVFEALEK   81 (271)
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEe-cCchHHHHHHHHHHHhcC-CceEEeCCCCCHHHHHHHHHHHHH
Confidence            36799999999996  99999999999999999884 676543333322222223 234689999999999999999999


Q ss_pred             hcCCccEEEEccCCCCC----CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhh
Q 024338          101 AWGTVDILINNAGITRD----TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANY  176 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y  176 (269)
                      .++++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|+|.  ++|+||++||..+..+.|++..|
T Consensus        82 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~--~~G~Iv~isS~~~~~~~~~~~~Y  159 (271)
T PRK06505         82 KWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMP--DGGSMLTLTYGGSTRVMPNYNVM  159 (271)
T ss_pred             HhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhc--cCceEEEEcCCCccccCCccchh
Confidence            99999999999997643    4677889999999999999999999999999996  35899999999999999999999


Q ss_pred             HHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccCh--HHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCC
Q 024338          177 SAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGE--DLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAG  254 (269)
Q Consensus       177 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~  254 (269)
                      ++||+|+.+|+++|+.|++++|||||+|+||+++|++.....+  ...+......|++++.+|+|+|++++||+ ++.++
T Consensus       160 ~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peeva~~~~fL~-s~~~~  238 (271)
T PRK06505        160 GVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDARAIFSYQQRNSPLRRTVTIDEVGGSALYLL-SDLSS  238 (271)
T ss_pred             hhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcchHHHHHHHhhcCCccccCCHHHHHHHHHHHh-Ccccc
Confidence            9999999999999999999999999999999999997643322  12233345578888999999999999999 56778


Q ss_pred             CccccEEEecCCcc
Q 024338          255 YITGQVLTIDGGMV  268 (269)
Q Consensus       255 ~~~G~~i~~dgg~~  268 (269)
                      ++||++|.+|||+.
T Consensus       239 ~itG~~i~vdgG~~  252 (271)
T PRK06505        239 GVTGEIHFVDSGYN  252 (271)
T ss_pred             ccCceEEeecCCcc
Confidence            99999999999975

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.3e-46  Score=314.66  Aligned_cols=242  Identities=17%  Similarity=0.234  Sum_probs=209.2

Q ss_pred             cCCCCCCEEEEeCCC--CchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGAS--RGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTA   98 (269)
Q Consensus        21 ~~~~~~k~vlItGas--~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~   98 (269)
                      +..+++|+++||||+  +|||+++|++|+++|++|++. .|+. +.++..+++.  ..++.++++|++|.++++++++++
T Consensus         2 ~~~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~-~r~~-~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~   77 (252)
T PRK06079          2 SGILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYT-YQND-RMKKSLQKLV--DEEDLLVECDVASDESIERAFATI   77 (252)
T ss_pred             ccccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEe-cCch-HHHHHHHhhc--cCceeEEeCCCCCHHHHHHHHHHH
Confidence            345789999999999  799999999999999999884 6763 3333334442  246778999999999999999999


Q ss_pred             HHhcCCccEEEEccCCCCC----CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCCh
Q 024338           99 VDAWGTVDILINNAGITRD----TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQA  174 (269)
Q Consensus        99 ~~~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~  174 (269)
                      .++++++|+||||||....    .++.+.+.++|++.+++|+.+++.+++.++|.|.  +.|+||++||..+..+.+++.
T Consensus        78 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~--~~g~Iv~iss~~~~~~~~~~~  155 (252)
T PRK06079         78 KERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLN--PGASIVTLTYFGSERAIPNYN  155 (252)
T ss_pred             HHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcc--cCceEEEEeccCccccCCcch
Confidence            9999999999999998643    5678889999999999999999999999999994  358999999999999999999


Q ss_pred             hhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC--hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCC
Q 024338          175 NYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG--EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPA  252 (269)
Q Consensus       175 ~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~  252 (269)
                      .|++||+|+++|+++++.|++++||+||+|+||+++|++.....  ++..+...+..|.+++.+|+|+|+++.||+ +++
T Consensus       156 ~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~l~-s~~  234 (252)
T PRK06079        156 VMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDSRTVDGVGVTIEEVGNTAAFLL-SDL  234 (252)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCChHHHHHHHHhcCcccCCCCHHHHHHHHHHHh-Ccc
Confidence            99999999999999999999999999999999999999764432  233444556678889999999999999999 567


Q ss_pred             CCCccccEEEecCCccC
Q 024338          253 AGYITGQVLTIDGGMVM  269 (269)
Q Consensus       253 ~~~~~G~~i~~dgg~~~  269 (269)
                      +.+++|+++.+|||+.+
T Consensus       235 ~~~itG~~i~vdgg~~~  251 (252)
T PRK06079        235 STGVTGDIIYVDKGVHL  251 (252)
T ss_pred             cccccccEEEeCCceec
Confidence            78999999999999764

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=100.00  E-value=3e-46  Score=299.98  Aligned_cols=230  Identities=34%  Similarity=0.510  Sum_probs=204.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      ..+++|+++|||||+|||.++|+.|++.|++|++ ..|+.++++++++++.+  .++.++..|++|.++++++++.+.+.
T Consensus         2 ~~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl-~aRR~drL~~la~~~~~--~~~~~~~~DVtD~~~~~~~i~~~~~~   78 (246)
T COG4221           2 TTLKGKVALITGASSGIGEATARALAEAGAKVVL-AARREERLEALADEIGA--GAALALALDVTDRAAVEAAIEALPEE   78 (246)
T ss_pred             CCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEE-EeccHHHHHHHHHhhcc--CceEEEeeccCCHHHHHHHHHHHHHh
Confidence            4567899999999999999999999999999988 69999999999999965  67889999999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKA  181 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  181 (269)
                      |+++|+||||||.....++.+.+.++|+.++++|+.|.++.+++++|.|.+++.|.|||+||++|..++|+...||++|+
T Consensus        79 ~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~~vY~ATK~  158 (246)
T COG4221          79 FGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKA  158 (246)
T ss_pred             hCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCCccchhhHH
Confidence            99999999999998779999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccCh----HHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCcc
Q 024338          182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGE----DLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYIT  257 (269)
Q Consensus       182 al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~  257 (269)
                      ++.+|++.|+.|+..++|||..|+||.+.|..+.....    +..+...+   .....+|+|+|++++|..+.|+.-.++
T Consensus       159 aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y~---~~~~l~p~dIA~~V~~~~~~P~~vnI~  235 (246)
T COG4221         159 AVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERADKVYK---GGTALTPEDIAEAVLFAATQPQHVNIN  235 (246)
T ss_pred             HHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCchhhhHHHHhc---cCCCCCHHHHHHHHHHHHhCCCccccc
Confidence            99999999999999999999999999997765443321    12222222   223458999999999999888764443

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.4e-46  Score=317.07  Aligned_cols=241  Identities=17%  Similarity=0.242  Sum_probs=203.2

Q ss_pred             CCCCCCEEEEeCCC--CchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHH-HHcCCcEEEEEccCCCHHHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGAS--RGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEI-EASGGQALTFGGDVSKEADVESMIKTA   98 (269)
Q Consensus        22 ~~~~~k~vlItGas--~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l-~~~~~~~~~~~~Dls~~~~~~~~~~~~   98 (269)
                      |.+++|++|||||+  +|||+++|+.|+++|++|++. .|+.+..+ ..+++ .+.+.. .++++|++|.++++++++++
T Consensus         1 ~~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~-~r~~~~~~-~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i   77 (274)
T PRK08415          1 MIMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFT-YLNEALKK-RVEPIAQELGSD-YVYELDVSKPEHFKSLAESL   77 (274)
T ss_pred             CccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEE-ecCHHHHH-HHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHH
Confidence            45789999999997  799999999999999998884 67653222 22333 222334 57899999999999999999


Q ss_pred             HHhcCCccEEEEccCCCCC----CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCCh
Q 024338           99 VDAWGTVDILINNAGITRD----TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQA  174 (269)
Q Consensus        99 ~~~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~  174 (269)
                      .+.++++|+||||||+...    .++.+.+.++|++.+++|+.+++.+++.++|.|.+  .|+||++||..+..+.|++.
T Consensus        78 ~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~--~g~Iv~isS~~~~~~~~~~~  155 (274)
T PRK08415         78 KKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND--GASVLTLSYLGGVKYVPHYN  155 (274)
T ss_pred             HHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc--CCcEEEEecCCCccCCCcch
Confidence            9999999999999998542    56778899999999999999999999999999954  58999999999999999999


Q ss_pred             hhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccCh--HHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCC
Q 024338          175 NYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGE--DLEKKILEKIPLGRYGQPEEVAGLVEFLALNPA  252 (269)
Q Consensus       175 ~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~  252 (269)
                      .|++||+|+.+|+++++.|++++||+||+|+||+++|++.....+  ..........|++++.+|+|+|++++||+ ++.
T Consensus       156 ~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~r~~~pedva~~v~fL~-s~~  234 (274)
T PRK08415        156 VMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDFRMILKWNEINAPLKKNVSIEEVGNSGMYLL-SDL  234 (274)
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchhhHHhhhhhhhCchhccCCHHHHHHHHHHHh-hhh
Confidence            999999999999999999999999999999999999987543322  11112233568888999999999999999 556


Q ss_pred             CCCccccEEEecCCcc
Q 024338          253 AGYITGQVLTIDGGMV  268 (269)
Q Consensus       253 ~~~~~G~~i~~dgg~~  268 (269)
                      +.++||+++.+|||+.
T Consensus       235 ~~~itG~~i~vdGG~~  250 (274)
T PRK08415        235 SSGVTGEIHYVDAGYN  250 (274)
T ss_pred             hhcccccEEEEcCccc
Confidence            7899999999999975

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=100.00  E-value=4.8e-46  Score=313.76  Aligned_cols=243  Identities=25%  Similarity=0.345  Sum_probs=208.5

Q ss_pred             CCCCCCEEEEeCCC--CchHHHHHHHHHHcCCcEEEEecCCH--HHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGAS--RGIGRAVATSLGKAGCKVLVNYARSS--KEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKT   97 (269)
Q Consensus        22 ~~~~~k~vlItGas--~giG~~~a~~l~~~G~~v~i~~~r~~--~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~   97 (269)
                      +++++|+++||||+  +|||+++|++|+++|++|++. .++.  .+.++..+++.+...+..++++|++|.+++++++++
T Consensus         2 ~~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~   80 (258)
T PRK07370          2 LDLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGIT-YLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFET   80 (258)
T ss_pred             cccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEE-ecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHH
Confidence            45789999999986  899999999999999998875 3332  234445555655445567889999999999999999


Q ss_pred             HHHhcCCccEEEEccCCCC----CCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCC
Q 024338           98 AVDAWGTVDILINNAGITR----DTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQ  173 (269)
Q Consensus        98 ~~~~~~~id~li~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~  173 (269)
                      +.++++++|++|||||+..    ..++.+.+.++|++.+++|+.+++.+++.++|.|.+  .|+||++||..+..+.|+.
T Consensus        81 ~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~  158 (258)
T PRK07370         81 IKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE--GGSIVTLTYLGGVRAIPNY  158 (258)
T ss_pred             HHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh--CCeEEEEeccccccCCccc
Confidence            9999999999999999754    256788899999999999999999999999999954  5899999999999999999


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC--hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCC
Q 024338          174 ANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG--EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNP  251 (269)
Q Consensus       174 ~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~  251 (269)
                      ..|++||+|+.+|+++|+.|++++||+||+|+||+++|++.....  ++..+......|++++.+|+|+++++.||+ ++
T Consensus       159 ~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~fl~-s~  237 (258)
T PRK07370        159 NVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGILDMIHHVEEKAPLRRTVTQTEVGNTAAFLL-SD  237 (258)
T ss_pred             chhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccchhhhhhhhhcCCcCcCCCHHHHHHHHHHHh-Ch
Confidence            999999999999999999999999999999999999999764322  233334445678889999999999999999 56


Q ss_pred             CCCCccccEEEecCCcc
Q 024338          252 AAGYITGQVLTIDGGMV  268 (269)
Q Consensus       252 ~~~~~~G~~i~~dgg~~  268 (269)
                      ++++++||++.+|||+.
T Consensus       238 ~~~~~tG~~i~vdgg~~  254 (258)
T PRK07370        238 LASGITGQTIYVDAGYC  254 (258)
T ss_pred             hhccccCcEEEECCccc
Confidence            77899999999999975

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=8.9e-46  Score=312.44  Aligned_cols=243  Identities=19%  Similarity=0.287  Sum_probs=206.1

Q ss_pred             CCCCCCEEEEeCCCC--chHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGASR--GIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAV   99 (269)
Q Consensus        22 ~~~~~k~vlItGas~--giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~   99 (269)
                      -.+++|+++||||++  |||+++|+.|+++|++|++. +|+. ..++..+++.+..+....+++|++|.++++++++++.
T Consensus         4 ~~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~-~r~~-~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~   81 (260)
T PRK06603          4 GLLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFT-YQSE-VLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIK   81 (260)
T ss_pred             cccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEE-eCch-HHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHH
Confidence            346799999999997  99999999999999998884 6663 3333444454332223467899999999999999999


Q ss_pred             HhcCCccEEEEccCCCCC----CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChh
Q 024338          100 DAWGTVDILINNAGITRD----TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQAN  175 (269)
Q Consensus       100 ~~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~  175 (269)
                      ++++++|+||||||....    .++.+.+.++|++.+++|+.+++.+++.++|.|+  ++|+||++||..+..+.|++..
T Consensus        82 ~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~--~~G~Iv~isS~~~~~~~~~~~~  159 (260)
T PRK06603         82 EKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMH--DGGSIVTLTYYGAEKVIPNYNV  159 (260)
T ss_pred             HHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhc--cCceEEEEecCccccCCCcccc
Confidence            999999999999997542    4677889999999999999999999999999994  3589999999999999999999


Q ss_pred             hHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC--hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCC
Q 024338          176 YSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG--EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAA  253 (269)
Q Consensus       176 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~  253 (269)
                      |++||+|+.+|+++++.|++++||+||+|+||+++|++.....  ++..+......|++++..|+|+|++++||+ ++++
T Consensus       160 Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~L~-s~~~  238 (260)
T PRK06603        160 MGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAATAPLKRNTTQEDVGGAAVYLF-SELS  238 (260)
T ss_pred             hhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHh-Cccc
Confidence            9999999999999999999999999999999999999754321  223334455678899999999999999999 5678


Q ss_pred             CCccccEEEecCCccC
Q 024338          254 GYITGQVLTIDGGMVM  269 (269)
Q Consensus       254 ~~~~G~~i~~dgg~~~  269 (269)
                      +++||++|.+|||+.+
T Consensus       239 ~~itG~~i~vdgG~~~  254 (260)
T PRK06603        239 KGVTGEIHYVDCGYNI  254 (260)
T ss_pred             ccCcceEEEeCCcccc
Confidence            8999999999999863

>PRK06114 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-45  Score=310.09  Aligned_cols=246  Identities=39%  Similarity=0.622  Sum_probs=217.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      .++++|++|||||++|||+++|++|+++|++|+++.+++++.++++.+++...+.++..+.+|++|+++++++++++.+.
T Consensus         4 ~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   83 (254)
T PRK06114          4 FDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAE   83 (254)
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999986444445567777777766778889999999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCC--ChhhHHh
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIG--QANYSAA  179 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~--~~~Y~~s  179 (269)
                      ++++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|.|.+++.++||++||..+..+.++  ...|+++
T Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~s  163 (254)
T PRK06114         84 LGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQAHYNAS  163 (254)
T ss_pred             cCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCCcchHHHH
Confidence            99999999999987777788899999999999999999999999999998888899999999998877654  6899999


Q ss_pred             HHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc-ChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccc
Q 024338          180 KAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL-GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITG  258 (269)
Q Consensus       180 K~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G  258 (269)
                      |+|++.++++++.|+.++||+||+|+||+++|++.... ..+..+......|++++.+|+|++++++||+ ++.++++||
T Consensus       164 Kaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~-s~~~~~~tG  242 (254)
T PRK06114        164 KAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRPEMVHQTKLFEEQTPMQRMAKVDEMVGPAVFLL-SDAASFCTG  242 (254)
T ss_pred             HHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHc-CccccCcCC
Confidence            99999999999999999999999999999999986431 1222344556778999999999999999999 567789999


Q ss_pred             cEEEecCCcc
Q 024338          259 QVLTIDGGMV  268 (269)
Q Consensus       259 ~~i~~dgg~~  268 (269)
                      ++|.+|||+.
T Consensus       243 ~~i~~dgg~~  252 (254)
T PRK06114        243 VDLLVDGGFV  252 (254)
T ss_pred             ceEEECcCEe
Confidence            9999999985

>PRK07478 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-45  Score=309.14  Aligned_cols=247  Identities=37%  Similarity=0.596  Sum_probs=218.8

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      +|++++|+++||||++|||.+++++|+++|++|+++ +|+++.++++.++++..+.++.++.+|++|.++++++++++.+
T Consensus         1 ~~~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (254)
T PRK07478          1 MMRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVG-ARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVE   79 (254)
T ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEE-eCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            356889999999999999999999999999998884 7888888888888877777888999999999999999999999


Q ss_pred             hcCCccEEEEccCCCC-CCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccc-cCCCCChhhHH
Q 024338          101 AWGTVDILINNAGITR-DTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGL-VGNIGQANYSA  178 (269)
Q Consensus       101 ~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~-~~~~~~~~Y~~  178 (269)
                      +++++|++|||||... ..++.+.+.+++++.+++|+.+++.+++.++|.|++++.++||++||..+. .+.++...|++
T Consensus        80 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~  159 (254)
T PRK07478         80 RFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPGMAAYAA  159 (254)
T ss_pred             hcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCCCCcchhHH
Confidence            9999999999999864 356778899999999999999999999999999988888999999999887 57889999999


Q ss_pred             hHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC--hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCc
Q 024338          179 AKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG--EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYI  256 (269)
Q Consensus       179 sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~  256 (269)
                      ||++++.++++++.|+.++||+|++|+||+++|++.....  +..........+.+++.+|+|+|+.++||+ ++.+.++
T Consensus       160 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~-s~~~~~~  238 (254)
T PRK07478        160 SKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAGLHALKRMAQPEEIAQAALFLA-SDAASFV  238 (254)
T ss_pred             HHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHc-CchhcCC
Confidence            9999999999999999999999999999999999765432  222333344557788889999999999999 5567799


Q ss_pred             cccEEEecCCccC
Q 024338          257 TGQVLTIDGGMVM  269 (269)
Q Consensus       257 ~G~~i~~dgg~~~  269 (269)
                      +|++|.+|||+.+
T Consensus       239 ~G~~~~~dgg~~~  251 (254)
T PRK07478        239 TGTALLVDGGVSI  251 (254)
T ss_pred             CCCeEEeCCchhc
Confidence            9999999999753

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-45  Score=311.74  Aligned_cols=249  Identities=29%  Similarity=0.462  Sum_probs=218.6

Q ss_pred             ccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHc-CCcEEEEEccCCCHHHHHHHHHHH
Q 024338           20 AAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS-GGQALTFGGDVSKEADVESMIKTA   98 (269)
Q Consensus        20 ~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dls~~~~~~~~~~~~   98 (269)
                      ++.++++|++|||||++|||+++|+.|+++|++|+++.+++.+.++++.++++.. +.++.++.+|++|+++++++++++
T Consensus         2 ~~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   81 (260)
T PRK08416          2 MSNEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKI   81 (260)
T ss_pred             cccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence            3467889999999999999999999999999999886566777777777777543 557889999999999999999999


Q ss_pred             HHhcCCccEEEEccCCCC------CCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCC
Q 024338           99 VDAWGTVDILINNAGITR------DTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIG  172 (269)
Q Consensus        99 ~~~~~~id~li~~ag~~~------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~  172 (269)
                      .+.++++|++|||||...      ..++.+.+.+++++.+++|+.+++.+++.++|.|++++.++||++||..+..+.|+
T Consensus        82 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  161 (260)
T PRK08416         82 DEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIEN  161 (260)
T ss_pred             HHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCCCC
Confidence            999999999999998642      24566788899999999999999999999999998777889999999999999999


Q ss_pred             ChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC--hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccC
Q 024338          173 QANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG--EDLEKKILEKIPLGRYGQPEEVAGLVEFLALN  250 (269)
Q Consensus       173 ~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~  250 (269)
                      ...|++||++++.|+++++.|+.++||+|++|+||+++|++.....  ++..+......|.+++.+|+|+|++++||+ +
T Consensus       162 ~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~r~~~p~~va~~~~~l~-~  240 (260)
T PRK08416        162 YAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSPLNRMGQPEDLAGACLFLC-S  240 (260)
T ss_pred             cccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHc-C
Confidence            9999999999999999999999999999999999999999865432  233444556678888999999999999999 5


Q ss_pred             CCCCCccccEEEecCCccC
Q 024338          251 PAAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       251 ~~~~~~~G~~i~~dgg~~~  269 (269)
                      +...+++|+++.+|||+.+
T Consensus       241 ~~~~~~~G~~i~vdgg~~~  259 (260)
T PRK08416        241 EKASWLTGQTIVVDGGTTF  259 (260)
T ss_pred             hhhhcccCcEEEEcCCeec
Confidence            5677999999999999864

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.4e-45  Score=311.49  Aligned_cols=243  Identities=19%  Similarity=0.271  Sum_probs=205.6

Q ss_pred             CCCCCEEEEeCC--CCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           23 NVEAPVAVVTGA--SRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        23 ~~~~k~vlItGa--s~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      .++||++|||||  ++|||+++|+.|+++|++|++. .|+. +.++..+++.........++||++|.++++++++++.+
T Consensus         3 ~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (261)
T PRK08690          3 FLQGKKILITGMISERSIAYGIAKACREQGAELAFT-YVVD-KLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGK   80 (261)
T ss_pred             ccCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEE-cCcH-HHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHH
Confidence            478999999997  6799999999999999999884 5553 33344445543333455789999999999999999999


Q ss_pred             hcCCccEEEEccCCCCCC----c-ccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChh
Q 024338          101 AWGTVDILINNAGITRDT----L-LMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQAN  175 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~----~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~  175 (269)
                      +++++|++|||||+....    + +.+.+.++|+..+++|+.+++.+++.++|.|+++ +|+||++||..+..+.|++..
T Consensus        81 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~-~g~Iv~iss~~~~~~~~~~~~  159 (261)
T PRK08690         81 HWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR-NSAIVALSYLGAVRAIPNYNV  159 (261)
T ss_pred             HhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc-CcEEEEEcccccccCCCCccc
Confidence            999999999999986432    2 3567888999999999999999999999998644 589999999999999999999


Q ss_pred             hHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC--hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCC
Q 024338          176 YSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG--EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAA  253 (269)
Q Consensus       176 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~  253 (269)
                      |++||+|+..|+++++.|++++||+||+|+||+++|++.....  ++..+...+..|++++.+|+|+|+++.||+ ++.+
T Consensus       160 Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~l~-s~~~  238 (261)
T PRK08690        160 MGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPLRRNVTIEEVGNTAAFLL-SDLS  238 (261)
T ss_pred             chhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCchHHHHHHHhhcCCCCCCCCHHHHHHHHHHHh-Cccc
Confidence            9999999999999999999999999999999999999765432  233334455678899999999999999999 5667


Q ss_pred             CCccccEEEecCCccC
Q 024338          254 GYITGQVLTIDGGMVM  269 (269)
Q Consensus       254 ~~~~G~~i~~dgg~~~  269 (269)
                      .+++|++|.+|||+.+
T Consensus       239 ~~~tG~~i~vdgG~~~  254 (261)
T PRK08690        239 SGITGEITYVDGGYSI  254 (261)
T ss_pred             CCcceeEEEEcCCccc
Confidence            7999999999999863

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.8e-45  Score=310.25  Aligned_cols=245  Identities=19%  Similarity=0.304  Sum_probs=207.4

Q ss_pred             ccCCCCCCEEEEeCCC--CchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHH
Q 024338           20 AAQNVEAPVAVVTGAS--RGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKT   97 (269)
Q Consensus        20 ~~~~~~~k~vlItGas--~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~   97 (269)
                      +.++++||++|||||+  +|||+++|++|+++|++|+++ .|+.+..+. .+++.+......+++||++|.+++++++++
T Consensus         4 ~~~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~-~r~~~~~~~-~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   81 (258)
T PRK07533          4 PLLPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVT-YLNDKARPY-VEPLAEELDAPIFLPLDVREPGQLEAVFAR   81 (258)
T ss_pred             cccccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEE-eCChhhHHH-HHHHHHhhccceEEecCcCCHHHHHHHHHH
Confidence            4567889999999998  499999999999999998884 666543222 222222212355789999999999999999


Q ss_pred             HHHhcCCccEEEEccCCCCC----CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCC
Q 024338           98 AVDAWGTVDILINNAGITRD----TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQ  173 (269)
Q Consensus        98 ~~~~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~  173 (269)
                      +.++++++|++|||||....    .++.+.+.++|++.+++|+.+++.+++.++|.|+  +.|+||++||..+..+.+++
T Consensus        82 ~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~--~~g~Ii~iss~~~~~~~~~~  159 (258)
T PRK07533         82 IAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMT--NGGSLLTMSYYGAEKVVENY  159 (258)
T ss_pred             HHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhc--cCCEEEEEeccccccCCccc
Confidence            99999999999999997643    4677889999999999999999999999999994  35899999999999888999


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC--hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCC
Q 024338          174 ANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG--EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNP  251 (269)
Q Consensus       174 ~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~  251 (269)
                      ..|++||+|+.+|+++++.|++++||+||+|+||+++|++.....  ++..+......|.+++.+|+|+|++++||+ ++
T Consensus       160 ~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~L~-s~  238 (258)
T PRK07533        160 NLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDALLEDAAERAPLRRLVDIDDVGAVAAFLA-SD  238 (258)
T ss_pred             hhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHh-Ch
Confidence            999999999999999999999999999999999999999865432  333344556678888999999999999999 55


Q ss_pred             CCCCccccEEEecCCccC
Q 024338          252 AAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       252 ~~~~~~G~~i~~dgg~~~  269 (269)
                      ++++++|+.+.+|||+.+
T Consensus       239 ~~~~itG~~i~vdgg~~~  256 (258)
T PRK07533        239 AARRLTGNTLYIDGGYHI  256 (258)
T ss_pred             hhccccCcEEeeCCcccc
Confidence            678999999999999753

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.1e-45  Score=309.63  Aligned_cols=242  Identities=23%  Similarity=0.328  Sum_probs=206.9

Q ss_pred             cCCCCCCEEEEeCCC--CchHHHHHHHHHHcCCcEEEEecCC---HHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGAS--RGIGRAVATSLGKAGCKVLVNYARS---SKEAEEVCKEIEASGGQALTFGGDVSKEADVESMI   95 (269)
Q Consensus        21 ~~~~~~k~vlItGas--~giG~~~a~~l~~~G~~v~i~~~r~---~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~   95 (269)
                      +++++||+++||||+  +|||+++|++|+++|++|++. .|+   .+.++++.++++  +.++..+++|++|.+++++++
T Consensus         2 ~~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~-~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~   78 (257)
T PRK08594          2 MLSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFT-YAGERLEKEVRELADTLE--GQESLLLPCDVTSDEEITACF   78 (257)
T ss_pred             ccccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEe-cCcccchHHHHHHHHHcC--CCceEEEecCCCCHHHHHHHH
Confidence            456789999999997  899999999999999998885 443   234444444432  457888999999999999999


Q ss_pred             HHHHHhcCCccEEEEccCCCC----CCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCC
Q 024338           96 KTAVDAWGTVDILINNAGITR----DTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNI  171 (269)
Q Consensus        96 ~~~~~~~~~id~li~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~  171 (269)
                      +++.++++++|++|||||+..    ..++.+.+.++|+..+++|+.+++.+++.++|.|.  +.|+||++||..+..+.+
T Consensus        79 ~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~g~Iv~isS~~~~~~~~  156 (257)
T PRK08594         79 ETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMT--EGGSIVTLTYLGGERVVQ  156 (257)
T ss_pred             HHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcc--cCceEEEEcccCCccCCC
Confidence            999999999999999999754    24667889999999999999999999999999994  358999999999999999


Q ss_pred             CChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC--hHHHHHHHhcCCCCCCCCHHHHHHHHHHhcc
Q 024338          172 GQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG--EDLEKKILEKIPLGRYGQPEEVAGLVEFLAL  249 (269)
Q Consensus       172 ~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~  249 (269)
                      +...|++||+|+++|+++++.|++++||+||+|+||+++|++.+...  ++..+......|++++.+|+|+|++++||+ 
T Consensus       157 ~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~~~~~l~-  235 (257)
T PRK08594        157 NYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGFNSILKEIEERAPLRRTTTQEEVGDTAAFLF-  235 (257)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccccHHHHHHhhcCCccccCCHHHHHHHHHHHc-
Confidence            99999999999999999999999999999999999999999754321  122233445668888899999999999999 


Q ss_pred             CCCCCCccccEEEecCCcc
Q 024338          250 NPAAGYITGQVLTIDGGMV  268 (269)
Q Consensus       250 ~~~~~~~~G~~i~~dgg~~  268 (269)
                      ++.+++++|+++.+|||+.
T Consensus       236 s~~~~~~tG~~~~~dgg~~  254 (257)
T PRK08594        236 SDLSRGVTGENIHVDSGYH  254 (257)
T ss_pred             CcccccccceEEEECCchh
Confidence            5677899999999999975

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-44  Score=304.53  Aligned_cols=246  Identities=34%  Similarity=0.576  Sum_probs=222.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      +++++|++|||||++|||++++++|+++|++|++ .+|+.+.++++.++++..+.++..+.+|++|.++++++++++.++
T Consensus         5 ~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl-~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (254)
T PRK08085          5 FSLAGKNILITGSAQGIGFLLATGLAEYGAEIII-NDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKD   83 (254)
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEE-EcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHh
Confidence            5678999999999999999999999999999888 588888888888888766677888999999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKA  181 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  181 (269)
                      ++++|++|||+|.....++.+.+.++|++.+++|+.+++.+++++.+.|.+++.++||++||..+..+.++...|+++|+
T Consensus        84 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  163 (254)
T PRK08085         84 IGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDTITPYAASKG  163 (254)
T ss_pred             cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCCCCcchHHHHH
Confidence            99999999999987767788899999999999999999999999999998777899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC--hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCcccc
Q 024338          182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG--EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQ  259 (269)
Q Consensus       182 al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~  259 (269)
                      +++.++++++.|++++||++|+|+||+++|++.....  +...+......|++++.+|+|+|+++.||+ ++.+++++|+
T Consensus       164 a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~-~~~~~~i~G~  242 (254)
T PRK08085        164 AVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPAARWGDPQELIGAAVFLS-SKASDFVNGH  242 (254)
T ss_pred             HHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh-CccccCCcCC
Confidence            9999999999999999999999999999999875432  333445556778899999999999999999 5678899999


Q ss_pred             EEEecCCccC
Q 024338          260 VLTIDGGMVM  269 (269)
Q Consensus       260 ~i~~dgg~~~  269 (269)
                      ++.+|||+++
T Consensus       243 ~i~~dgg~~~  252 (254)
T PRK08085        243 LLFVDGGMLV  252 (254)
T ss_pred             EEEECCCeee
Confidence            9999999863

>PRK07062 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-44  Score=305.74  Aligned_cols=245  Identities=31%  Similarity=0.473  Sum_probs=216.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHc--CCcEEEEEccCCCHHHHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS--GGQALTFGGDVSKEADVESMIKTAV   99 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dls~~~~~~~~~~~~~   99 (269)
                      .++++|+++||||++|||+++++.|+++|++|++ ..|+.+.+++..+++.+.  +.++.++.+|++|.++++++++++.
T Consensus         4 ~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   82 (265)
T PRK07062          4 IQLEGRVAVVTGGSSGIGLATVELLLEAGASVAI-CGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVE   82 (265)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEE-EeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHH
Confidence            4678999999999999999999999999999887 588888888877777654  3468889999999999999999999


Q ss_pred             HhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHh
Q 024338          100 DAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAA  179 (269)
Q Consensus       100 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  179 (269)
                      +.++++|+||||||.....++.+.+.++|++.+++|+.+++.+++.++|.|++++.|+||++||..+..+.++...|+++
T Consensus        83 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~as  162 (265)
T PRK07062         83 ARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPHMVATSAA  162 (265)
T ss_pred             HhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCCCchHhHHH
Confidence            99999999999999877778888999999999999999999999999999988778999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC----------hHHHHHH--HhcCCCCCCCCHHHHHHHHHHh
Q 024338          180 KAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG----------EDLEKKI--LEKIPLGRYGQPEEVAGLVEFL  247 (269)
Q Consensus       180 K~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~----------~~~~~~~--~~~~~~~~~~~~~~~a~~~~~l  247 (269)
                      |+++.+|+++++.|+.++||+|++|+||+++|++.....          +...+..  ....|++++.+|+|+|++++||
T Consensus       163 Kaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~~~~~L  242 (265)
T PRK07062        163 RAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPLGRLGRPDEAARALFFL  242 (265)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHH
Confidence            999999999999999999999999999999999754211          1111111  2456888999999999999999


Q ss_pred             ccCCCCCCccccEEEecCCcc
Q 024338          248 ALNPAAGYITGQVLTIDGGMV  268 (269)
Q Consensus       248 ~~~~~~~~~~G~~i~~dgg~~  268 (269)
                      + ++.+.++||++|.+|||+.
T Consensus       243 ~-s~~~~~~tG~~i~vdgg~~  262 (265)
T PRK07062        243 A-SPLSSYTTGSHIDVSGGFA  262 (265)
T ss_pred             h-CchhcccccceEEEcCceE
Confidence            9 5667899999999999974

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.1e-44  Score=305.86  Aligned_cols=240  Identities=17%  Similarity=0.276  Sum_probs=203.6

Q ss_pred             CCCCEEEEeCCCC--chHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           24 VEAPVAVVTGASR--GIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        24 ~~~k~vlItGas~--giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      ++||+++||||++  |||+++|+.|+++|++|+++ .|+ +..++..+++........++.+|++|+++++++++++.+.
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~-~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFT-YQN-DKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKV   81 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEE-ecc-hhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhh
Confidence            6799999999986  99999999999999998874 666 3444455555544445677899999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCc-----ccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhh
Q 024338          102 WGTVDILINNAGITRDTL-----LMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANY  176 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~-----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y  176 (269)
                      ++++|++|||||+....+     +.+.+.++|+..+++|+.+++.+++.+.|.+.  ++|+||++||..+..+.+++..|
T Consensus        82 ~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~g~Iv~iss~~~~~~~~~~~~Y  159 (262)
T PRK07984         82 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLN--PGSALLTLSYLGAERAIPNYNVM  159 (262)
T ss_pred             cCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhc--CCcEEEEEecCCCCCCCCCcchh
Confidence            999999999999754322     55678899999999999999999999998663  45899999999999999999999


Q ss_pred             HHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccCh--HHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCC
Q 024338          177 SAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGE--DLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAG  254 (269)
Q Consensus       177 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~  254 (269)
                      ++||+|+++|+++++.|++++|||||+|+||+++|++.....+  ...+......|.+++..|+|++++++||+ ++.++
T Consensus       160 ~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~L~-s~~~~  238 (262)
T PRK07984        160 GLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLC-SDLSA  238 (262)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCchHHHHHHHHHcCCCcCCCCHHHHHHHHHHHc-Ccccc
Confidence            9999999999999999999999999999999999986543221  22233345678889999999999999999 55678


Q ss_pred             CccccEEEecCCcc
Q 024338          255 YITGQVLTIDGGMV  268 (269)
Q Consensus       255 ~~~G~~i~~dgg~~  268 (269)
                      +++|+++.+|||+.
T Consensus       239 ~itG~~i~vdgg~~  252 (262)
T PRK07984        239 GISGEVVHVDGGFS  252 (262)
T ss_pred             cccCcEEEECCCcc
Confidence            99999999999964

>PRK08589 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.9e-44  Score=306.23  Aligned_cols=242  Identities=37%  Similarity=0.607  Sum_probs=212.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      .+++|++|||||++|||+++++.|+++|++|+++ .|+ +.+++..+++++.+.++.++.+|+++.++++++++++.+.+
T Consensus         3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~-~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   80 (272)
T PRK08589          3 RLENKVAVITGASTGIGQASAIALAQEGAYVLAV-DIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQF   80 (272)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEE-eCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            4679999999999999999999999999999885 677 67777788887667788999999999999999999999999


Q ss_pred             CCccEEEEccCCCCC-CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHH
Q 024338          103 GTVDILINNAGITRD-TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKA  181 (269)
Q Consensus       103 ~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  181 (269)
                      +++|+||||||.... .++.+.+.+.|++.+++|+.+++.+++.++|.|.+++ ++||++||..+..+.++...|++||+
T Consensus        81 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asKa  159 (272)
T PRK08589         81 GRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAADLYRSGYNAAKG  159 (272)
T ss_pred             CCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCCCCCCchHHHHHH
Confidence            999999999998643 5677889999999999999999999999999997654 89999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChH--------HHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCC
Q 024338          182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGED--------LEKKILEKIPLGRYGQPEEVAGLVEFLALNPAA  253 (269)
Q Consensus       182 al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~  253 (269)
                      |++.|+++++.|+.++||+||+|+||+++|++.....+.        +........|.+++.+|+|+|++++||+ ++..
T Consensus       160 al~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~-s~~~  238 (272)
T PRK08589        160 AVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLGKPEEVAKLVVFLA-SDDS  238 (272)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccCCCCCCcCHHHHHHHHHHHc-Cchh
Confidence            999999999999999999999999999999986543211        1111123457888889999999999999 4567


Q ss_pred             CCccccEEEecCCcc
Q 024338          254 GYITGQVLTIDGGMV  268 (269)
Q Consensus       254 ~~~~G~~i~~dgg~~  268 (269)
                      .+++|++|.+|||+.
T Consensus       239 ~~~~G~~i~vdgg~~  253 (272)
T PRK08589        239 SFITGETIRIDGGVM  253 (272)
T ss_pred             cCcCCCEEEECCCcc
Confidence            799999999999975

>PRK06172 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.7e-44  Score=301.21  Aligned_cols=247  Identities=36%  Similarity=0.585  Sum_probs=221.7

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      ++++++|+++||||+++||.+++++|+++|++|++ ..|+.+..++..+++.+.+.++..+.+|++|.++++++++++.+
T Consensus         2 ~~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   80 (253)
T PRK06172          2 SMTFSGKVALVTGGAAGIGRATALAFAREGAKVVV-ADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIA   80 (253)
T ss_pred             CcCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEE-EeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            46688999999999999999999999999999888 47888888888888877777899999999999999999999999


Q ss_pred             hcCCccEEEEccCCCCC-CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHh
Q 024338          101 AWGTVDILINNAGITRD-TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAA  179 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  179 (269)
                      .++++|++|||+|.... .++.+.+.+++++.+++|+.+++.++++++|.|.+++.+++|++||..+..+.++...|+++
T Consensus        81 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~s  160 (253)
T PRK06172         81 AYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSIYAAS  160 (253)
T ss_pred             HhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCCchhHHH
Confidence            99999999999998644 44778899999999999999999999999999987778999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc---ChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCc
Q 024338          180 KAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL---GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYI  256 (269)
Q Consensus       180 K~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~  256 (269)
                      |++++.|+++++.|+.++||+|++|+||+++|++....   .+...+......|.++..+|+++++.++||+ ++.+.++
T Consensus       161 Kaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ia~~~~~l~-~~~~~~~  239 (253)
T PRK06172        161 KHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPVGRIGKVEEVASAVLYLC-SDGASFT  239 (253)
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHHHhccCCCCCccCHHHHHHHHHHHh-CccccCc
Confidence            99999999999999999999999999999999987654   2334445556678888899999999999999 5567799


Q ss_pred             cccEEEecCCccC
Q 024338          257 TGQVLTIDGGMVM  269 (269)
Q Consensus       257 ~G~~i~~dgg~~~  269 (269)
                      +|++|.+|||+++
T Consensus       240 ~G~~i~~dgg~~~  252 (253)
T PRK06172        240 TGHALMVDGGATA  252 (253)
T ss_pred             CCcEEEECCCccC
Confidence            9999999999875

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.1e-44  Score=304.05  Aligned_cols=241  Identities=18%  Similarity=0.265  Sum_probs=199.2

Q ss_pred             CCCCCEEEEeCC--CCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           23 NVEAPVAVVTGA--SRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        23 ~~~~k~vlItGa--s~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      .+++|++|||||  ++|||+++|++|+++|++|++. .|.....++ .+++.+.......+++|++|+++++++++++.+
T Consensus         3 ~l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   80 (260)
T PRK06997          3 FLAGKRILITGLLSNRSIAYGIAKACKREGAELAFT-YVGDRFKDR-ITEFAAEFGSDLVFPCDVASDEQIDALFASLGQ   80 (260)
T ss_pred             ccCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEE-ccchHHHHH-HHHHHHhcCCcceeeccCCCHHHHHHHHHHHHH
Confidence            467999999997  6799999999999999999884 443221222 222222212234689999999999999999999


Q ss_pred             hcCCccEEEEccCCCCCC----c-ccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChh
Q 024338          101 AWGTVDILINNAGITRDT----L-LMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQAN  175 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~----~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~  175 (269)
                      +++++|++|||||.....    + +.+.+.++|++.+++|+.+++.++++++|+|.  +.|+||++||..+..+.++...
T Consensus        81 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~--~~g~Ii~iss~~~~~~~~~~~~  158 (260)
T PRK06997         81 HWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLS--DDASLLTLSYLGAERVVPNYNT  158 (260)
T ss_pred             HhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcC--CCceEEEEeccccccCCCCcch
Confidence            999999999999986432    2 45678899999999999999999999999993  4589999999999999999999


Q ss_pred             hHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC--hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCC
Q 024338          176 YSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG--EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAA  253 (269)
Q Consensus       176 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~  253 (269)
                      |++||+|+.+|+++++.|++++||+||+|+||+++|++.....  ++..+......|+++..+|+|+++++.||+ ++++
T Consensus       159 Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~l~-s~~~  237 (260)
T PRK06997        159 MGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDFGKILDFVESNAPLRRNVTIEEVGNVAAFLL-SDLA  237 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccchhhHHHHHHhcCcccccCCHHHHHHHHHHHh-Cccc
Confidence            9999999999999999999999999999999999998754322  222233344568888999999999999999 5567


Q ss_pred             CCccccEEEecCCcc
Q 024338          254 GYITGQVLTIDGGMV  268 (269)
Q Consensus       254 ~~~~G~~i~~dgg~~  268 (269)
                      .++||++|.+|||+.
T Consensus       238 ~~itG~~i~vdgg~~  252 (260)
T PRK06997        238 SGVTGEITHVDSGFN  252 (260)
T ss_pred             cCcceeEEEEcCChh
Confidence            899999999999975

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.8e-44  Score=306.34  Aligned_cols=240  Identities=21%  Similarity=0.288  Sum_probs=201.5

Q ss_pred             CCCCEEEEeCCC--CchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           24 VEAPVAVVTGAS--RGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        24 ~~~k~vlItGas--~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      +++|++|||||+  +|||+++|+.|+++|++|+++ .|+.... +..+++.+.......+++|++|+++++++++++.+.
T Consensus         8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~-~r~~~~~-~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   85 (272)
T PRK08159          8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFT-YQGDALK-KRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKK   85 (272)
T ss_pred             ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEE-cCchHHH-HHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHh
Confidence            468999999997  899999999999999998874 6653222 222233222123557899999999999999999999


Q ss_pred             cCCccEEEEccCCCCC----CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhH
Q 024338          102 WGTVDILINNAGITRD----TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYS  177 (269)
Q Consensus       102 ~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~  177 (269)
                      ++++|++|||||+...    .++.+.+.++|++.+++|+.+++.+++.++|.|.  ++|+||++||..+..+.|++..|+
T Consensus        86 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~--~~g~Iv~iss~~~~~~~p~~~~Y~  163 (272)
T PRK08159         86 WGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMT--DGGSILTLTYYGAEKVMPHYNVMG  163 (272)
T ss_pred             cCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcC--CCceEEEEeccccccCCCcchhhh
Confidence            9999999999997642    4677889999999999999999999999999984  358999999999998999999999


Q ss_pred             HhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccCh--HHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCC
Q 024338          178 AAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGE--DLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGY  255 (269)
Q Consensus       178 ~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~  255 (269)
                      +||+|+.+|+++++.|++++||+||+|+||+++|++.....+  ...+......|++++.+|+|+|++++||+ ++++.+
T Consensus       164 asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~~~~L~-s~~~~~  242 (272)
T PRK08159        164 VAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIEEVGDSALYLL-SDLSRG  242 (272)
T ss_pred             hHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCcchHHHHHHHhCCcccccCCHHHHHHHHHHHh-CccccC
Confidence            999999999999999999999999999999999987543322  11122223568888899999999999999 566789


Q ss_pred             ccccEEEecCCcc
Q 024338          256 ITGQVLTIDGGMV  268 (269)
Q Consensus       256 ~~G~~i~~dgg~~  268 (269)
                      +||++|.+|||+.
T Consensus       243 itG~~i~vdgG~~  255 (272)
T PRK08159        243 VTGEVHHVDSGYH  255 (272)
T ss_pred             ccceEEEECCCce
Confidence            9999999999975

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=3.8e-44  Score=302.11  Aligned_cols=245  Identities=39%  Similarity=0.688  Sum_probs=217.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      +++++|++|||||++|||.+++++|+++|++|+++ .|+ +..+++.+.+.+.+.++.++.+|+++.++++++++++.+.
T Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   88 (258)
T PRK06935         11 FSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIIT-THG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEE   88 (258)
T ss_pred             ccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEE-eCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            56889999999999999999999999999999885 555 4555666666665677889999999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKA  181 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  181 (269)
                      ++++|++|||+|.....++.+.+.++|++.+++|+.+++.+++.++|+|++++.++||++||..+..+.++...|+++|+
T Consensus        89 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  168 (258)
T PRK06935         89 FGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFVPAYTASKH  168 (258)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCCchhhHHHHH
Confidence            99999999999987767788889999999999999999999999999998888899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC--hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCcccc
Q 024338          182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG--EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQ  259 (269)
Q Consensus       182 al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~  259 (269)
                      +++.++++++.|+.++||+||+|+||+++|++.....  +...+......|.+++..|+|+|+++.||+ ++.+++++|+
T Consensus       169 a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~-s~~~~~~~G~  247 (258)
T PRK06935        169 GVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKRIPAGRWGEPDDLMGAAVFLA-SRASDYVNGH  247 (258)
T ss_pred             HHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHc-ChhhcCCCCC
Confidence            9999999999999999999999999999999764322  223344555678889999999999999999 5677899999


Q ss_pred             EEEecCCccC
Q 024338          260 VLTIDGGMVM  269 (269)
Q Consensus       260 ~i~~dgg~~~  269 (269)
                      +|.+|||+++
T Consensus       248 ~i~~dgg~~~  257 (258)
T PRK06935        248 ILAVDGGWLV  257 (258)
T ss_pred             EEEECCCeec
Confidence            9999999863

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=100.00  E-value=6.5e-44  Score=299.90  Aligned_cols=245  Identities=40%  Similarity=0.708  Sum_probs=213.5

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      .++++||+++|||+++|||.+++++|+++|++|+++ .++.  .++..+++...+.++..+++|++|.++++++++++.+
T Consensus         5 ~~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~-~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   81 (253)
T PRK08993          5 AFSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGI-NIVE--PTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVA   81 (253)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEe-cCcc--hHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            346889999999999999999999999999998874 4433  2334455555566788899999999999999999999


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCeEEEEcCCccccCCCCChhhHHh
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK-KGRIINIASVVGLVGNIGQANYSAA  179 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~~~Y~~s  179 (269)
                      +++++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|.|.+++ .|+||++||..+..+.+....|+++
T Consensus        82 ~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  161 (253)
T PRK08993         82 EFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTAS  161 (253)
T ss_pred             HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCCCcchHHH
Confidence            999999999999987767788889999999999999999999999999997664 5899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC--hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCcc
Q 024338          180 KAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG--EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYIT  257 (269)
Q Consensus       180 K~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~  257 (269)
                      |+|+++++++++.|+.++||+|++|+||+++|++.....  +.......+..|.+++..|+|+|+.+.||+ ++.+.+++
T Consensus       162 Kaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~~~l~-s~~~~~~~  240 (253)
T PRK08993        162 KSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGPVVFLA-SSASDYIN  240 (253)
T ss_pred             HHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHh-CccccCcc
Confidence            999999999999999999999999999999999865432  222334556778899999999999999999 56778999


Q ss_pred             ccEEEecCCccC
Q 024338          258 GQVLTIDGGMVM  269 (269)
Q Consensus       258 G~~i~~dgg~~~  269 (269)
                      |+++.+|||+..
T Consensus       241 G~~~~~dgg~~~  252 (253)
T PRK08993        241 GYTIAVDGGWLA  252 (253)
T ss_pred             CcEEEECCCEec
Confidence            999999999863

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=100.00  E-value=3.3e-44  Score=307.02  Aligned_cols=244  Identities=23%  Similarity=0.305  Sum_probs=205.2

Q ss_pred             ccCCCCCCEEEEeCC--CCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHc----------C---CcEEEEEcc
Q 024338           20 AAQNVEAPVAVVTGA--SRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS----------G---GQALTFGGD   84 (269)
Q Consensus        20 ~~~~~~~k~vlItGa--s~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~----------~---~~~~~~~~D   84 (269)
                      +.++++||++|||||  ++|||+++|+.|+++|++|++  .|+.+.++++..+++..          +   .....+.+|
T Consensus         3 ~~~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   80 (303)
T PLN02730          3 LPIDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV--GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLD   80 (303)
T ss_pred             CCcCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE--EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecc
Confidence            356799999999999  899999999999999999887  46777777776666421          1   113568889


Q ss_pred             C--CC------------------HHHHHHHHHHHHHhcCCccEEEEccCCCC--CCcccCCCHHHHHHHHHHHhHHHHHH
Q 024338           85 V--SK------------------EADVESMIKTAVDAWGTVDILINNAGITR--DTLLMRMKKSQWQDVIDLNLTGVFLC  142 (269)
Q Consensus        85 l--s~------------------~~~~~~~~~~~~~~~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l  142 (269)
                      +  ++                  .++++++++++.+.+|++|+||||||...  ..++.+.+.++|++.+++|+.+++.+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l  160 (303)
T PLN02730         81 AVFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSL  160 (303)
T ss_pred             eecCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHH
Confidence            8  33                  44899999999999999999999998643  36788999999999999999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEEcCCccccCCCCC-hhhHHhHHHHHHHHHHHHHHhcc-CCeEEEEEecCCccCCcccccC--
Q 024338          143 TQAAAKIMMKKKKGRIINIASVVGLVGNIGQ-ANYSAAKAGVIGLTKTVAKEYAS-RNINVNAIAPGFIASDMTAKLG--  218 (269)
Q Consensus       143 ~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~-~~Y~~sK~al~~~~~~la~e~~~-~gi~v~~v~pG~v~t~~~~~~~--  218 (269)
                      ++.++|.|++  .|+||++||..+..+.|+. ..|++||+|+++|+++|+.|+++ +|||||+|+||+++|++.....  
T Consensus       161 ~~~~~p~m~~--~G~II~isS~a~~~~~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~~~~  238 (303)
T PLN02730        161 LQHFGPIMNP--GGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAIGFI  238 (303)
T ss_pred             HHHHHHHHhc--CCEEEEEechhhcCCCCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhccccc
Confidence            9999999964  3999999999999888865 58999999999999999999986 7999999999999999875422  


Q ss_pred             hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEEEecCCcc
Q 024338          219 EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMV  268 (269)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg~~  268 (269)
                      ++..+......|++++..|+|++++++||+ ++.+++++|+++.+|||+.
T Consensus       239 ~~~~~~~~~~~pl~r~~~peevA~~~~fLa-S~~a~~itG~~l~vdGG~~  287 (303)
T PLN02730        239 DDMIEYSYANAPLQKELTADEVGNAAAFLA-SPLASAITGATIYVDNGLN  287 (303)
T ss_pred             HHHHHHHHhcCCCCCCcCHHHHHHHHHHHh-CccccCccCCEEEECCCcc
Confidence            222233334557788889999999999999 5677899999999999974

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=100.00  E-value=4.5e-44  Score=301.19  Aligned_cols=247  Identities=40%  Similarity=0.662  Sum_probs=213.2

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcC---CcEEEEEccCCCHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASG---GQALTFGGDVSKEADVESMIKT   97 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dls~~~~~~~~~~~   97 (269)
                      +..+.+|+++|||+++|||+++|++|++.|++|++ ++|+.+.+++...++...+   .++..+.||+++++++++++++
T Consensus         3 ~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~   81 (270)
T KOG0725|consen    3 GGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVI-TGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEF   81 (270)
T ss_pred             CccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHH
Confidence            46789999999999999999999999999999999 6899998888888776653   4588999999999999999999


Q ss_pred             HHHh-cCCccEEEEccCCCCCC-cccCCCHHHHHHHHHHHhHH-HHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCC-
Q 024338           98 AVDA-WGTVDILINNAGITRDT-LLMRMKKSQWQDVIDLNLTG-VFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQ-  173 (269)
Q Consensus        98 ~~~~-~~~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~n~~~-~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~-  173 (269)
                      ..++ +|+||++|||||..... ++.+.+.++|+..+++|+.| .+.+.+.+.|.+.+++++.|+++||..+..+.++. 
T Consensus        82 ~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~~~  161 (270)
T KOG0725|consen   82 AVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPGSG  161 (270)
T ss_pred             HHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCc
Confidence            9998 79999999999987654 78999999999999999995 66677777777777789999999999999887666 


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccc-ccCh----HHHHH--HHhcCCCCCCCCHHHHHHHHHH
Q 024338          174 ANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTA-KLGE----DLEKK--ILEKIPLGRYGQPEEVAGLVEF  246 (269)
Q Consensus       174 ~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~-~~~~----~~~~~--~~~~~~~~~~~~~~~~a~~~~~  246 (269)
                      ..|+++|+|+++|+|++|.|+++.|||||+|+||++.|++.. ....    ++.+.  .....|.+++..|+|++..+.|
T Consensus       162 ~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p~gr~g~~~eva~~~~f  241 (270)
T KOG0725|consen  162 VAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVPLGRVGTPEEVAEAAAF  241 (270)
T ss_pred             ccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhhccccccccCCccCHHHHHHhHHh
Confidence            799999999999999999999999999999999999999721 1111    22222  2235589999999999999999


Q ss_pred             hccCCCCCCccccEEEecCCccC
Q 024338          247 LALNPAAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       247 l~~~~~~~~~~G~~i~~dgg~~~  269 (269)
                      |++++.+ +++||+|.+|||+++
T Consensus       242 la~~~as-yitG~~i~vdgG~~~  263 (270)
T KOG0725|consen  242 LASDDAS-YITGQTIIVDGGFTV  263 (270)
T ss_pred             hcCcccc-cccCCEEEEeCCEEe
Confidence            9955444 999999999999863

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=100.00  E-value=1.1e-43  Score=302.56  Aligned_cols=247  Identities=38%  Similarity=0.582  Sum_probs=218.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      +++++|+++||||++|||++++++|+++|++|++ .+|+.+..+++.+++...+.++.++++|++|+++++++++++.++
T Consensus         6 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   84 (278)
T PRK08277          6 FSLKGKVAVITGGGGVLGGAMAKELARAGAKVAI-LDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILED   84 (278)
T ss_pred             eccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999888 578888888888888766678889999999999999999999999


Q ss_pred             cCCccEEEEccCCCCC---------------CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcc
Q 024338          102 WGTVDILINNAGITRD---------------TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVG  166 (269)
Q Consensus       102 ~~~id~li~~ag~~~~---------------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  166 (269)
                      ++++|++|||||....               .++.+.+.++|++.+++|+.+++.+++.++|.|.+++.++||++||..+
T Consensus        85 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~  164 (278)
T PRK08277         85 FGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNA  164 (278)
T ss_pred             cCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchh
Confidence            9999999999996432               2456788999999999999999999999999998877899999999999


Q ss_pred             ccCCCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC-------hHHHHHHHhcCCCCCCCCHHH
Q 024338          167 LVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG-------EDLEKKILEKIPLGRYGQPEE  239 (269)
Q Consensus       167 ~~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~  239 (269)
                      ..+.++...|++||++++.++++++.|+.+.||+||+|.||+++|++.+...       .+..+......|++++.+|+|
T Consensus       165 ~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~d  244 (278)
T PRK08277        165 FTPLTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAHTPMGRFGKPEE  244 (278)
T ss_pred             cCCCCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHhccCCccCCCCHHH
Confidence            9999999999999999999999999999999999999999999999754321       122334455678899999999


Q ss_pred             HHHHHHHhccCCCCCCccccEEEecCCccC
Q 024338          240 VAGLVEFLALNPAAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       240 ~a~~~~~l~~~~~~~~~~G~~i~~dgg~~~  269 (269)
                      +|++++||++..++.++||++|.+|||+++
T Consensus       245 va~~~~~l~s~~~~~~~tG~~i~vdgG~~~  274 (278)
T PRK08277        245 LLGTLLWLADEKASSFVTGVVLPVDGGFSA  274 (278)
T ss_pred             HHHHHHHHcCccccCCcCCCEEEECCCeec
Confidence            999999999432788999999999999863

>PRK07791 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.4e-44  Score=305.09  Aligned_cols=239  Identities=37%  Similarity=0.598  Sum_probs=208.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCH---------HHHHHHHHHHHHcCCcEEEEEccCCCHHHHHH
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSS---------KEAEEVCKEIEASGGQALTFGGDVSKEADVES   93 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~---------~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~   93 (269)
                      .+++|++|||||++|||+++|++|+++|++|+++ .++.         +.++++.+++...+.++.++.+|++|.+++++
T Consensus         3 ~l~~k~~lITGas~GIG~aia~~la~~G~~vii~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~   81 (286)
T PRK07791          3 LLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVN-DIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAAN   81 (286)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEe-eCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHH
Confidence            4689999999999999999999999999999885 4443         66777778887767788899999999999999


Q ss_pred             HHHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC------CCeEEEEcCCccc
Q 024338           94 MIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK------KGRIINIASVVGL  167 (269)
Q Consensus        94 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~------~~~iv~isS~~~~  167 (269)
                      +++++.+.++++|++|||||+....++.+.+.++|++.+++|+.+++.++++++|.|.++.      .|+||++||..+.
T Consensus        82 ~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~  161 (286)
T PRK07791         82 LVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGL  161 (286)
T ss_pred             HHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhC
Confidence            9999999999999999999987777788999999999999999999999999999996542      3799999999999


Q ss_pred             cCCCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCC--CCCCHHHHHHHHH
Q 024338          168 VGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLG--RYGQPEEVAGLVE  245 (269)
Q Consensus       168 ~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~a~~~~  245 (269)
                      .+.+++..|++||+|+++|+++++.|++++||+||+|+|| ++|++.....    +......+.+  +..+|+|+|++++
T Consensus       162 ~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~~~~----~~~~~~~~~~~~~~~~pedva~~~~  236 (286)
T PRK07791        162 QGSVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTETVF----AEMMAKPEEGEFDAMAPENVSPLVV  236 (286)
T ss_pred             cCCCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcchhhH----HHHHhcCcccccCCCCHHHHHHHHH
Confidence            9999999999999999999999999999999999999999 8898754321    2222223333  3468999999999


Q ss_pred             HhccCCCCCCccccEEEecCCcc
Q 024338          246 FLALNPAAGYITGQVLTIDGGMV  268 (269)
Q Consensus       246 ~l~~~~~~~~~~G~~i~~dgg~~  268 (269)
                      ||+ ++++.+++|++|.+|||++
T Consensus       237 ~L~-s~~~~~itG~~i~vdgG~~  258 (286)
T PRK07791        237 WLG-SAESRDVTGKVFEVEGGKI  258 (286)
T ss_pred             HHh-CchhcCCCCcEEEEcCCce
Confidence            999 5567899999999999975

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=100.00  E-value=3e-44  Score=296.35  Aligned_cols=226  Identities=27%  Similarity=0.380  Sum_probs=204.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHc-CCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS-GGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      .+.++++||||||+|||+++|+.|+++|+++++ +.|+.++++++.+++++. +.++.++++|+++.++++++.+++.+.
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liL-vaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~   81 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGYNLIL-VARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKER   81 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEE-EeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhc
Confidence            457899999999999999999999999999988 699999999999999875 578899999999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKA  181 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  181 (269)
                      ..+||+||||||+...+++.+.+.++.++++++|+.+...++++++|.|.+++.|.||||+|.+++.|.|..+.|++||+
T Consensus        82 ~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~~avY~ATKa  161 (265)
T COG0300          82 GGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATKA  161 (265)
T ss_pred             CCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcchHHHHHHHH
Confidence            88999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCC
Q 024338          182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAA  253 (269)
Q Consensus       182 al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~  253 (269)
                      ++..|+++|+.|+++.||+|.+|+||++.|++.......    .....+.....+|+++|+.++........
T Consensus       162 ~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~~~~~----~~~~~~~~~~~~~~~va~~~~~~l~~~k~  229 (265)
T COG0300         162 FVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDAKGSD----VYLLSPGELVLSPEDVAEAALKALEKGKR  229 (265)
T ss_pred             HHHHHHHHHHHHhcCCCeEEEEEecCccccccccccccc----cccccchhhccCHHHHHHHHHHHHhcCCc
Confidence            999999999999999999999999999999998621111    11112233456899999999999855443

>PRK12747 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-43  Score=297.44  Aligned_cols=243  Identities=35%  Similarity=0.560  Sum_probs=209.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh--
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA--  101 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~--  101 (269)
                      +++|+++||||++|||.+++++|+++|++|++...++.+..++...++...+.+...+.+|+++.++++.+++++.+.  
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   81 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence            468999999999999999999999999999885556777777777777766677888999999999999999988763  


Q ss_pred             --cC--CccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhH
Q 024338          102 --WG--TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYS  177 (269)
Q Consensus       102 --~~--~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~  177 (269)
                        ++  ++|+||||||.....++.+.+.++|++++++|+.+++.++++++|.|.+  .|+||++||..+..+.++...|+
T Consensus        82 ~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~  159 (252)
T PRK12747         82 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD--NSRIINISSAATRISLPDFIAYS  159 (252)
T ss_pred             hhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhc--CCeEEEECCcccccCCCCchhHH
Confidence              34  8999999999876667888899999999999999999999999999954  48999999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC-hHHHHHHH-hcCCCCCCCCHHHHHHHHHHhccCCCCCC
Q 024338          178 AAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG-EDLEKKIL-EKIPLGRYGQPEEVAGLVEFLALNPAAGY  255 (269)
Q Consensus       178 ~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~a~~~~~l~~~~~~~~  255 (269)
                      +||+++++++++++.|+.++||+||+|+||+++|++..... +....... ...+.+++.+|+|+|+++.||+ ++...+
T Consensus       160 ~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~-s~~~~~  238 (252)
T PRK12747        160 MTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLA-SPDSRW  238 (252)
T ss_pred             HHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccCHHHHHHHHhcCcccCCCCHHHHHHHHHHHc-CccccC
Confidence            99999999999999999999999999999999999865432 12222222 2336788889999999999998 566789


Q ss_pred             ccccEEEecCCccC
Q 024338          256 ITGQVLTIDGGMVM  269 (269)
Q Consensus       256 ~~G~~i~~dgg~~~  269 (269)
                      ++|+.|.+|||+.+
T Consensus       239 ~~G~~i~vdgg~~~  252 (252)
T PRK12747        239 VTGQLIDVSGGSCL  252 (252)
T ss_pred             cCCcEEEecCCccC
Confidence            99999999999864

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.8e-43  Score=296.54  Aligned_cols=243  Identities=29%  Similarity=0.473  Sum_probs=213.7

Q ss_pred             CCCCCCEEEEeCCC--CchHHHHHHHHHHcCCcEEEEe----cC------CHHHHHHHHHHHHHcCCcEEEEEccCCCHH
Q 024338           22 QNVEAPVAVVTGAS--RGIGRAVATSLGKAGCKVLVNY----AR------SSKEAEEVCKEIEASGGQALTFGGDVSKEA   89 (269)
Q Consensus        22 ~~~~~k~vlItGas--~giG~~~a~~l~~~G~~v~i~~----~r------~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~   89 (269)
                      ..++||+++||||+  +|||+++|++|+++|++|+++.    .+      +.+...++.+++++.+.++.++++|++|.+
T Consensus         2 ~~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~   81 (256)
T PRK12859          2 NQLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQND   81 (256)
T ss_pred             CCcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHH
Confidence            46889999999999  4999999999999999988752    11      233444566667776778999999999999


Q ss_pred             HHHHHHHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccC
Q 024338           90 DVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVG  169 (269)
Q Consensus        90 ~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~  169 (269)
                      +++++++++.+.++++|++|||||.....++.+.+.+++++.+++|+.+++.+++.++|.|.+++.|+||++||..+..+
T Consensus        82 ~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~  161 (256)
T PRK12859         82 APKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQGP  161 (256)
T ss_pred             HHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCCC
Confidence            99999999999999999999999987777888999999999999999999999999999998777899999999999999


Q ss_pred             CCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhcc
Q 024338          170 NIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLAL  249 (269)
Q Consensus       170 ~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~  249 (269)
                      .+++..|+++|++++.|+++++.++.++||+|++|+||+++|++..   +...+......|.++..+|+|+|+.+.||+ 
T Consensus       162 ~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~---~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~-  237 (256)
T PRK12859        162 MVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMT---EEIKQGLLPMFPFGRIGEPKDAARLIKFLA-  237 (256)
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCC---HHHHHHHHhcCCCCCCcCHHHHHHHHHHHh-
Confidence            9999999999999999999999999999999999999999999643   233334455667888889999999999998 


Q ss_pred             CCCCCCccccEEEecCCcc
Q 024338          250 NPAAGYITGQVLTIDGGMV  268 (269)
Q Consensus       250 ~~~~~~~~G~~i~~dgg~~  268 (269)
                      ++...+++|++|.+|||+.
T Consensus       238 s~~~~~~~G~~i~~dgg~~  256 (256)
T PRK12859        238 SEEAEWITGQIIHSEGGFK  256 (256)
T ss_pred             CccccCccCcEEEeCCCcC
Confidence            5567799999999999963

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-43  Score=299.22  Aligned_cols=239  Identities=28%  Similarity=0.427  Sum_probs=209.7

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCccE
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDI  107 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~  107 (269)
                      ++|||||++|||++++++|+++|++|++ .+|+++.+++..+++++.+ ++.++++|++|.++++++++++.++++++|+
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~-~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~   79 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVI-SSRNEENLEKALKELKEYG-EVYAVKADLSDKDDLKNLVKEAWELLGGIDA   79 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEE-EeCCHHHHHHHHHHHHhcC-CceEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            6999999999999999999999999888 5888888888888876543 6788999999999999999999999999999


Q ss_pred             EEEccCCCC--CCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-CCCCeEEEEcCCccccCCCCChhhHHhHHHHH
Q 024338          108 LINNAGITR--DTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMK-KKKGRIINIASVVGLVGNIGQANYSAAKAGVI  184 (269)
Q Consensus       108 li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~  184 (269)
                      ||||||...  ..++.+.+.++|.+.+++|+.+++.+++.++|.|.+ +++|+||++||..+..+.++...|+++|+++.
T Consensus        80 li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sKaa~~  159 (259)
T PRK08340         80 LVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPPLVLADVTRAGLV  159 (259)
T ss_pred             EEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCCchHHHHHHHHHH
Confidence            999999753  345777888999999999999999999999998864 56789999999999999999999999999999


Q ss_pred             HHHHHHHHHhccCCeEEEEEecCCccCCcccccC-----------hH-HHHHHHhcCCCCCCCCHHHHHHHHHHhccCCC
Q 024338          185 GLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG-----------ED-LEKKILEKIPLGRYGQPEEVAGLVEFLALNPA  252 (269)
Q Consensus       185 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~-----------~~-~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~  252 (269)
                      +|+++++.|+.++||+|++|+||+++|++.+...           ++ ..+......|++++.+|+|+|+++.||+ +++
T Consensus       160 ~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~fL~-s~~  238 (259)
T PRK08340        160 QLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTPLKRTGRWEELGSLIAFLL-SEN  238 (259)
T ss_pred             HHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCCccCCCCHHHHHHHHHHHc-Ccc
Confidence            9999999999999999999999999999764211           11 1233455678899999999999999999 567


Q ss_pred             CCCccccEEEecCCccC
Q 024338          253 AGYITGQVLTIDGGMVM  269 (269)
Q Consensus       253 ~~~~~G~~i~~dgg~~~  269 (269)
                      ++++||++|.+|||+.+
T Consensus       239 ~~~itG~~i~vdgg~~~  255 (259)
T PRK08340        239 AEYMLGSTIVFDGAMTR  255 (259)
T ss_pred             cccccCceEeecCCcCC
Confidence            88999999999999863

>PRK07035 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.4e-43  Score=294.53  Aligned_cols=245  Identities=35%  Similarity=0.560  Sum_probs=219.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      +++++|++|||||++|||.+++++|+++|++|+++ .|+.+.++++.+++.+.+.+..++++|+++.++++++++++.+.
T Consensus         4 ~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~-~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (252)
T PRK07035          4 FDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVS-SRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRER   82 (252)
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE-eCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            57889999999999999999999999999998884 78888888888888776677888999999999999999999999


Q ss_pred             cCCccEEEEccCCCC-CCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhH
Q 024338          102 WGTVDILINNAGITR-DTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       102 ~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                      ++++|++|||||... ..++.+.+.+++++.+++|+.+++.++++++|+|++++.++++++||..+..+.++.+.|++||
T Consensus        83 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  162 (252)
T PRK07035         83 HGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSITK  162 (252)
T ss_pred             cCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCCCCCcchHHHH
Confidence            999999999999753 3567788999999999999999999999999999887889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC--hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccc
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG--EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITG  258 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G  258 (269)
                      ++++.|+++++.|+.++||+|++|+||+++|++.....  +...+......|.++..+|+|+|+.++||+ ++...+++|
T Consensus       163 ~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~-~~~~~~~~g  241 (252)
T PRK07035        163 AAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKNDAILKQALAHIPLRRHAEPSEMAGAVLYLA-SDASSYTTG  241 (252)
T ss_pred             HHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCHHHHHHHHccCCCCCcCCHHHHHHHHHHHh-CccccCccC
Confidence            99999999999999999999999999999999865432  233444555678888999999999999999 556779999


Q ss_pred             cEEEecCCcc
Q 024338          259 QVLTIDGGMV  268 (269)
Q Consensus       259 ~~i~~dgg~~  268 (269)
                      +++.+|||++
T Consensus       242 ~~~~~dgg~~  251 (252)
T PRK07035        242 ECLNVDGGYL  251 (252)
T ss_pred             CEEEeCCCcC
Confidence            9999999975

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=3.3e-43  Score=295.82  Aligned_cols=246  Identities=33%  Similarity=0.546  Sum_probs=222.3

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      ++++++|++|||||+++||++++++|+++|++|++ ..|+++..+++.+.++..+.++..+.+|++|.++++++++++.+
T Consensus         5 ~~~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~-~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   83 (255)
T PRK07523          5 LFDLTGRRALVTGSSQGIGYALAEGLAQAGAEVIL-NGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEA   83 (255)
T ss_pred             ccCCCCCEEEEECCcchHHHHHHHHHHHcCCEEEE-EeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            45688999999999999999999999999999887 58888888888888876667788999999999999999999999


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhH
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                      .++++|++|||+|.....++.+.+.+++++.+++|+.+++.+++.+.+.|.+++.++||++||..+..+.++...|+++|
T Consensus        84 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~sK  163 (255)
T PRK07523         84 EIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALARPGIAPYTATK  163 (255)
T ss_pred             hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCCCCCccHHHHH
Confidence            99999999999998877788889999999999999999999999999999887889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC--hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccc
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG--EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITG  258 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G  258 (269)
                      ++++.++++++.|+++.||+|++|.||+++|++.....  +...+.+....|.+++..|+|+|++++||+ ++++.+++|
T Consensus       164 ~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~-~~~~~~~~G  242 (255)
T PRK07523        164 GAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTPAGRWGKVEELVGACVFLA-SDASSFVNG  242 (255)
T ss_pred             HHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHc-CchhcCccC
Confidence            99999999999999999999999999999999865432  334445566778899999999999999999 556789999


Q ss_pred             cEEEecCCcc
Q 024338          259 QVLTIDGGMV  268 (269)
Q Consensus       259 ~~i~~dgg~~  268 (269)
                      ++|.+|||+.
T Consensus       243 ~~i~~~gg~~  252 (255)
T PRK07523        243 HVLYVDGGIT  252 (255)
T ss_pred             cEEEECCCee
Confidence            9999999975

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1e-43  Score=299.19  Aligned_cols=240  Identities=21%  Similarity=0.248  Sum_probs=201.6

Q ss_pred             cCCCCCCEEEEeCC--CCchHHHHHHHHHHcCCcEEEEecCCH--HHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGA--SRGIGRAVATSLGKAGCKVLVNYARSS--KEAEEVCKEIEASGGQALTFGGDVSKEADVESMIK   96 (269)
Q Consensus        21 ~~~~~~k~vlItGa--s~giG~~~a~~l~~~G~~v~i~~~r~~--~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~   96 (269)
                      ++++++|+++||||  ++|||+++|+.|+++|++|+++ +|+.  +..+++.+++   +.++.++.+|++|+++++++++
T Consensus         2 ~~~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~-~r~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~i~~~~~   77 (256)
T PRK07889          2 MGLLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLT-GFGRALRLTERIAKRL---PEPAPVLELDVTNEEHLASLAD   77 (256)
T ss_pred             cccccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEe-cCccchhHHHHHHHhc---CCCCcEEeCCCCCHHHHHHHHH
Confidence            45688999999999  8999999999999999998884 5543  3345554444   2356789999999999999999


Q ss_pred             HHHHhcCCccEEEEccCCCCC----CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCC
Q 024338           97 TAVDAWGTVDILINNAGITRD----TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIG  172 (269)
Q Consensus        97 ~~~~~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~  172 (269)
                      ++.+.++++|++|||||+...    .++.+.+.++|++.+++|+.+++.+++.++|.|+  +.|+||++++. +..+.+.
T Consensus        78 ~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~--~~g~Iv~is~~-~~~~~~~  154 (256)
T PRK07889         78 RVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMN--EGGSIVGLDFD-ATVAWPA  154 (256)
T ss_pred             HHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcc--cCceEEEEeec-ccccCCc
Confidence            999999999999999998643    3567788999999999999999999999999995  35899999875 4456678


Q ss_pred             ChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC--hHHHHHHHhcCCCC-CCCCHHHHHHHHHHhcc
Q 024338          173 QANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG--EDLEKKILEKIPLG-RYGQPEEVAGLVEFLAL  249 (269)
Q Consensus       173 ~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~a~~~~~l~~  249 (269)
                      +..|++||+++.+|+++++.|++++||+||+|+||+++|++.+...  ++..+...+..|++ ++.+|+|+|+.++||+ 
T Consensus       155 ~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~~p~evA~~v~~l~-  233 (256)
T PRK07889        155 YDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGFELLEEGWDERAPLGWDVKDPTPVARAVVALL-  233 (256)
T ss_pred             cchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCcHHHHHHHHhcCccccccCCHHHHHHHHHHHh-
Confidence            8889999999999999999999999999999999999999865432  22233344556776 5789999999999999 


Q ss_pred             CCCCCCccccEEEecCCcc
Q 024338          250 NPAAGYITGQVLTIDGGMV  268 (269)
Q Consensus       250 ~~~~~~~~G~~i~~dgg~~  268 (269)
                      ++...+++|+++.+|||+.
T Consensus       234 s~~~~~~tG~~i~vdgg~~  252 (256)
T PRK07889        234 SDWFPATTGEIVHVDGGAH  252 (256)
T ss_pred             CcccccccceEEEEcCcee
Confidence            5567799999999999975

>PRK08265 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.1e-43  Score=296.41  Aligned_cols=240  Identities=32%  Similarity=0.492  Sum_probs=208.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      .++++|+++||||++|||++++++|+++|++|+++ +|+.+.++++.+++   +.++.++++|++|+++++++++++.+.
T Consensus         2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~-~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~   77 (261)
T PRK08265          2 IGLAGKVAIVTGGATLIGAAVARALVAAGARVAIV-DIDADNGAAVAASL---GERARFIATDITDDAAIERAVATVVAR   77 (261)
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEE-eCCHHHHHHHHHHh---CCeeEEEEecCCCHHHHHHHHHHHHHH
Confidence            45789999999999999999999999999998884 78877776666655   457888999999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKA  181 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  181 (269)
                      ++++|++|||||......+ +.+.++|++.+++|+.+++.+++.++|.|. ++.|+||++||..+..+.++...|+++|+
T Consensus        78 ~g~id~lv~~ag~~~~~~~-~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~g~ii~isS~~~~~~~~~~~~Y~asKa  155 (261)
T PRK08265         78 FGRVDILVNLACTYLDDGL-ASSRADWLAALDVNLVSAAMLAQAAHPHLA-RGGGAIVNFTSISAKFAQTGRWLYPASKA  155 (261)
T ss_pred             hCCCCEEEECCCCCCCCcC-cCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-cCCcEEEEECchhhccCCCCCchhHHHHH
Confidence            9999999999997654333 568899999999999999999999999997 66799999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccCh---HHHHHH-HhcCCCCCCCCHHHHHHHHHHhccCCCCCCcc
Q 024338          182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGE---DLEKKI-LEKIPLGRYGQPEEVAGLVEFLALNPAAGYIT  257 (269)
Q Consensus       182 al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~  257 (269)
                      +++.++++++.|+.+.||+||+|+||+++|++.....+   ...+.. ....|++++.+|+|+|+++.||+ ++.+++++
T Consensus       156 a~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~-s~~~~~~t  234 (261)
T PRK08265        156 AIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAPFHLLGRVGDPEEVAQVVAFLC-SDAASFVT  234 (261)
T ss_pred             HHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccchhHHHHhhcccCCCCCccCHHHHHHHHHHHc-CccccCcc
Confidence            99999999999999999999999999999998654321   111222 22457888999999999999999 55678999


Q ss_pred             ccEEEecCCcc
Q 024338          258 GQVLTIDGGMV  268 (269)
Q Consensus       258 G~~i~~dgg~~  268 (269)
                      |+.|.+|||+.
T Consensus       235 G~~i~vdgg~~  245 (261)
T PRK08265        235 GADYAVDGGYS  245 (261)
T ss_pred             CcEEEECCCee
Confidence            99999999975

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=100.00  E-value=2.6e-44  Score=300.22  Aligned_cols=230  Identities=42%  Similarity=0.699  Sum_probs=207.1

Q ss_pred             CCC--CchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHc-CCcEEEEEccCCCHHHHHHHHHHHHHhc-CCccEE
Q 024338           33 GAS--RGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS-GGQALTFGGDVSKEADVESMIKTAVDAW-GTVDIL  108 (269)
Q Consensus        33 Gas--~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dls~~~~~~~~~~~~~~~~-~~id~l  108 (269)
                      |++  +|||+++|++|+++|++|++ .+|+.+.+++..+++.+. +.+  ++.+|++++++++++++++.+.+ +++|+|
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~-~~~~~~~~~~~~~~l~~~~~~~--~~~~D~~~~~~v~~~~~~~~~~~~g~iD~l   77 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVIL-TDRNEEKLADALEELAKEYGAE--VIQCDLSDEESVEALFDEAVERFGGRIDIL   77 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEE-EESSHHHHHHHHHHHHHHTTSE--EEESCTTSHHHHHHHHHHHHHHHCSSESEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEE-EeCChHHHHHHHHHHHHHcCCc--eEeecCcchHHHHHHHHHHHhhcCCCeEEE
Confidence            566  99999999999999999999 488888766656666543 434  59999999999999999999999 999999


Q ss_pred             EEccCCCCC----CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHHH
Q 024338          109 INNAGITRD----TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVI  184 (269)
Q Consensus       109 i~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~  184 (269)
                      |||+|....    .++.+.+.++|+..+++|+.+++.+++++.|+|.+  .|+||++||..+..+.++...|+++|+|++
T Consensus        78 V~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~gsii~iss~~~~~~~~~~~~y~~sKaal~  155 (241)
T PF13561_consen   78 VNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKK--GGSIINISSIAAQRPMPGYSAYSASKAALE  155 (241)
T ss_dssp             EEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHH--EEEEEEEEEGGGTSBSTTTHHHHHHHHHHH
T ss_pred             EecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh--CCCcccccchhhcccCccchhhHHHHHHHH
Confidence            999998765    67888999999999999999999999999998855  489999999999999999999999999999


Q ss_pred             HHHHHHHHHhcc-CCeEEEEEecCCccCCcccccC--hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEE
Q 024338          185 GLTKTVAKEYAS-RNINVNAIAPGFIASDMTAKLG--EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL  261 (269)
Q Consensus       185 ~~~~~la~e~~~-~gi~v~~v~pG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i  261 (269)
                      .|++++|.|+++ +|||||+|+||+++|++.....  ++..+...+..|++++.+|+|+|++++||+ ++.++|+|||+|
T Consensus       156 ~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl~r~~~~~evA~~v~fL~-s~~a~~itG~~i  234 (241)
T PF13561_consen  156 GLTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKRIPLGRLGTPEEVANAVLFLA-SDAASYITGQVI  234 (241)
T ss_dssp             HHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHSTTSSHBEHHHHHHHHHHHH-SGGGTTGTSEEE
T ss_pred             HHHHHHHHHhccccCeeeeeecccceeccchhccccccchhhhhhhhhccCCCcCHHHHHHHHHHHh-CccccCccCCeE
Confidence            999999999999 9999999999999999865443  567778888999999999999999999999 678889999999


Q ss_pred             EecCCcc
Q 024338          262 TIDGGMV  268 (269)
Q Consensus       262 ~~dgg~~  268 (269)
                      .+|||++
T Consensus       235 ~vDGG~s  241 (241)
T PF13561_consen  235 PVDGGFS  241 (241)
T ss_dssp             EESTTGG
T ss_pred             EECCCcC
Confidence            9999985

...

>PRK07985 oxidoreductase; Provisional

Probab=100.00  E-value=7.2e-43  Score=299.64  Aligned_cols=243  Identities=29%  Similarity=0.436  Sum_probs=211.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCC--HHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARS--SKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~--~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      ++++|++|||||++|||++++++|+++|++|++. .|+  .+..+++.+.+...+.++.++.+|++|.++++++++++.+
T Consensus        46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~  124 (294)
T PRK07985         46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAIS-YLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHK  124 (294)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEe-cCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999874 443  3445566666655566788899999999999999999999


Q ss_pred             hcCCccEEEEccCCCC-CCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHh
Q 024338          101 AWGTVDILINNAGITR-DTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAA  179 (269)
Q Consensus       101 ~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  179 (269)
                      .++++|++|||||... ..++.+.+.++|++.+++|+.+++.++++++|.|.+  .++||++||..+..+.++...|++|
T Consensus       125 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~iv~iSS~~~~~~~~~~~~Y~as  202 (294)
T PRK07985        125 ALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPK--GASIITTSSIQAYQPSPHLLDYAAT  202 (294)
T ss_pred             HhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhc--CCEEEEECCchhccCCCCcchhHHH
Confidence            9999999999999753 356778899999999999999999999999999843  4899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccc--cChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCcc
Q 024338          180 KAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAK--LGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYIT  257 (269)
Q Consensus       180 K~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~  257 (269)
                      |++++.++++++.|++++||+||+|+||+++|++...  ..+...+......|++++..|+|+|++++||+ ++++.+++
T Consensus       203 Kaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~pedva~~~~fL~-s~~~~~it  281 (294)
T PRK07985        203 KAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLA-SQESSYVT  281 (294)
T ss_pred             HHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCCHHHHHHHhccCCCCCCCCHHHHHHHHHhhh-ChhcCCcc
Confidence            9999999999999999999999999999999997532  12333344556778888999999999999999 56778999


Q ss_pred             ccEEEecCCccC
Q 024338          258 GQVLTIDGGMVM  269 (269)
Q Consensus       258 G~~i~~dgg~~~  269 (269)
                      |++|.+|||+.+
T Consensus       282 G~~i~vdgG~~~  293 (294)
T PRK07985        282 AEVHGVCGGEHL  293 (294)
T ss_pred             ccEEeeCCCeeC
Confidence            999999999753

>PRK12743 oxidoreductase; Provisional

Probab=100.00  E-value=1.6e-42  Score=291.94  Aligned_cols=243  Identities=36%  Similarity=0.571  Sum_probs=218.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTV  105 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i  105 (269)
                      +|++|||||+++||++++++|+++|++|+++..++.+..+++.++++..+.++.++.+|++|.++++++++++.+.++++
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI   81 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999998866777777888888887777889999999999999999999999999999


Q ss_pred             cEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCCeEEEEcCCccccCCCCChhhHHhHHHHH
Q 024338          106 DILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKK-KKGRIINIASVVGLVGNIGQANYSAAKAGVI  184 (269)
Q Consensus       106 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~  184 (269)
                      |++|||+|.....++.+.+.+++++.+++|+.+++.+++++.+.|.++ +.++||++||..+..+.++...|+++|++++
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~  161 (256)
T PRK12743         82 DVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKHALG  161 (256)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCCCcchhHHHHHHHH
Confidence            999999998776677788999999999999999999999999999654 3589999999999999999999999999999


Q ss_pred             HHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEEEec
Q 024338          185 GLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTID  264 (269)
Q Consensus       185 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~d  264 (269)
                      .++++++.++.++||++++|+||+++|++.....++.........+.++..+|+|+++.+.||+ ++...+++|+++.+|
T Consensus       162 ~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~-~~~~~~~~G~~~~~d  240 (256)
T PRK12743        162 GLTKAMALELVEHGILVNAVAPGAIATPMNGMDDSDVKPDSRPGIPLGRPGDTHEIASLVAWLC-SEGASYTTGQSLIVD  240 (256)
T ss_pred             HHHHHHHHHhhhhCeEEEEEEeCCccCccccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHh-CccccCcCCcEEEEC
Confidence            9999999999999999999999999999876544444444555678888889999999999998 556779999999999


Q ss_pred             CCccC
Q 024338          265 GGMVM  269 (269)
Q Consensus       265 gg~~~  269 (269)
                      ||+.+
T Consensus       241 gg~~~  245 (256)
T PRK12743        241 GGFML  245 (256)
T ss_pred             CCccc
Confidence            99753

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-42  Score=292.17  Aligned_cols=246  Identities=41%  Similarity=0.665  Sum_probs=217.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      .++++|++|||||+++||+++|++|+++|+.++++.+++.+..+++.++++..+.++.++.+|++|.++++++++++.+.
T Consensus         3 ~~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~   82 (261)
T PRK08936          3 SDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKE   82 (261)
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Confidence            45789999999999999999999999999998886444566677777777766778889999999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCeEEEEcCCccccCCCCChhhHHhH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK-KGRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                      ++++|++|||||...+.++.+.+.+++++.+++|+.+++.+++.++|.|.++. .++||++||..+..+.++...|+++|
T Consensus        83 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK  162 (261)
T PRK08936         83 FGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYAASK  162 (261)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCCCCcccHHHH
Confidence            99999999999987777788889999999999999999999999999997654 68999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc--ChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccc
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL--GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITG  258 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G  258 (269)
                      +|++.|+++++.|+.+.||+|++|+||+++|++....  .++.........|++++.+|+|+++.+.||++ +.+.+++|
T Consensus       163 aa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s-~~~~~~~G  241 (261)
T PRK08936        163 GGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPKQRADVESMIPMGYIGKPEEIAAVAAWLAS-SEASYVTG  241 (261)
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcC-cccCCccC
Confidence            9999999999999999999999999999999986432  22333334456788899999999999999994 56789999


Q ss_pred             cEEEecCCcc
Q 024338          259 QVLTIDGGMV  268 (269)
Q Consensus       259 ~~i~~dgg~~  268 (269)
                      ++|.+|||+.
T Consensus       242 ~~i~~d~g~~  251 (261)
T PRK08936        242 ITLFADGGMT  251 (261)
T ss_pred             cEEEECCCcc
Confidence            9999999975

>PRK08643 acetoin reductase; Validated

Probab=100.00  E-value=1.1e-42  Score=292.71  Aligned_cols=242  Identities=38%  Similarity=0.618  Sum_probs=215.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTV  105 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i  105 (269)
                      +|++|||||+++||.+++++|+++|++|++ .+|+.+..+++..++...+.++.++++|++++++++++++++.++++++
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   80 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAI-VDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDL   80 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            689999999999999999999999999888 4788888888888887666788899999999999999999999999999


Q ss_pred             cEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCeEEEEcCCccccCCCCChhhHHhHHHHH
Q 024338          106 DILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK-KGRIINIASVVGLVGNIGQANYSAAKAGVI  184 (269)
Q Consensus       106 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK~al~  184 (269)
                      |++|||||.....++.+.+.+++++.+++|+.+++.+++.+++.|.+.+ .++||++||..+..+.++...|+++|++++
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  160 (256)
T PRK08643         81 NVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAVR  160 (256)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCCCchhHHHHHHHH
Confidence            9999999987777788889999999999999999999999999997654 579999999999999999999999999999


Q ss_pred             HHHHHHHHHhccCCeEEEEEecCCccCCcccccCh----------HH-HHHHHhcCCCCCCCCHHHHHHHHHHhccCCCC
Q 024338          185 GLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGE----------DL-EKKILEKIPLGRYGQPEEVAGLVEFLALNPAA  253 (269)
Q Consensus       185 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~----------~~-~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~  253 (269)
                      .|++.++.|+.+.||+|++|+||+++|++......          .+ ........+.+++.+|+++|+++.||+ ++.+
T Consensus       161 ~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~L~-~~~~  239 (256)
T PRK08643        161 GLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLGRLSEPEDVANCVSFLA-GPDS  239 (256)
T ss_pred             HHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccCCCCCCcCHHHHHHHHHHHh-Cccc
Confidence            99999999999999999999999999998643211          11 223445678888899999999999999 5678


Q ss_pred             CCccccEEEecCCccC
Q 024338          254 GYITGQVLTIDGGMVM  269 (269)
Q Consensus       254 ~~~~G~~i~~dgg~~~  269 (269)
                      .+++|++|.+|||+..
T Consensus       240 ~~~~G~~i~vdgg~~~  255 (256)
T PRK08643        240 DYITGQTIIVDGGMVF  255 (256)
T ss_pred             cCccCcEEEeCCCeec
Confidence            8999999999999863

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=7.8e-43  Score=293.63  Aligned_cols=241  Identities=36%  Similarity=0.558  Sum_probs=206.9

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      .+.+++|+++||||++|||+++|++|+++|++|+++..++++..++    ++..  ++.++.+|++|+++++++++++.+
T Consensus         2 ~~~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~----l~~~--~~~~~~~Dl~~~~~~~~~~~~~~~   75 (255)
T PRK06463          2 SMRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKE----LREK--GVFTIKCDVGNRDQVKKSKEVVEK   75 (255)
T ss_pred             CCCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHH----HHhC--CCeEEEecCCCHHHHHHHHHHHHH
Confidence            3567899999999999999999999999999998865555443333    3222  467899999999999999999999


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcccc-CCCCChhhHHh
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLV-GNIGQANYSAA  179 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~-~~~~~~~Y~~s  179 (269)
                      .++++|+||||||.....++.+.+.+++++.+++|+.+++.+++.++|.|++++.++||++||..+.. +.++...|++|
T Consensus        76 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~as  155 (255)
T PRK06463         76 EFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAEGTTFYAIT  155 (255)
T ss_pred             HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCCCCccHhHHH
Confidence            99999999999998766778888999999999999999999999999999877789999999998875 45678899999


Q ss_pred             HHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC-----hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCC
Q 024338          180 KAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG-----EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAG  254 (269)
Q Consensus       180 K~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~  254 (269)
                      |+|+++|+++++.|+.+.||+|+.|+||+++|++.....     +...+......+.+++.+|+|+|+.++||+ ++.+.
T Consensus       156 Kaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~-s~~~~  234 (255)
T PRK06463        156 KAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTVLKTTGKPEDIANIVLFLA-SDDAR  234 (255)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCCcCCCcCHHHHHHHHHHHc-Chhhc
Confidence            999999999999999999999999999999999864321     123334456678888899999999999998 55667


Q ss_pred             CccccEEEecCCcc
Q 024338          255 YITGQVLTIDGGMV  268 (269)
Q Consensus       255 ~~~G~~i~~dgg~~  268 (269)
                      +++|+++.+|||..
T Consensus       235 ~~~G~~~~~dgg~~  248 (255)
T PRK06463        235 YITGQVIVADGGRI  248 (255)
T ss_pred             CCCCCEEEECCCee
Confidence            89999999999974

>PRK06398 aldose dehydrogenase; Validated

Probab=100.00  E-value=3.9e-43  Score=296.05  Aligned_cols=233  Identities=35%  Similarity=0.561  Sum_probs=204.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      +++++|++|||||++|||++++++|+++|++|+++ +|+.+..           .++.++++|++|+++++++++++.+.
T Consensus         2 ~~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~-~r~~~~~-----------~~~~~~~~D~~~~~~i~~~~~~~~~~   69 (258)
T PRK06398          2 LGLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINF-DIKEPSY-----------NDVDYFKVDVSNKEQVIKGIDYVISK   69 (258)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEE-eCCcccc-----------CceEEEEccCCCHHHHHHHHHHHHHH
Confidence            46889999999999999999999999999999885 6654321           25778999999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKA  181 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  181 (269)
                      ++++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|+|.+++.++||++||..+..+.++...|++||+
T Consensus        70 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKa  149 (258)
T PRK06398         70 YGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYVTSKH  149 (258)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCCCCchhhhhHH
Confidence            99999999999987777888999999999999999999999999999998877899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC-------hHH----HHHHHhcCCCCCCCCHHHHHHHHHHhccC
Q 024338          182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG-------EDL----EKKILEKIPLGRYGQPEEVAGLVEFLALN  250 (269)
Q Consensus       182 al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~-------~~~----~~~~~~~~~~~~~~~~~~~a~~~~~l~~~  250 (269)
                      +++.|+++++.|+.+. |+||+|+||+++|++.....       +..    ........|++++.+|+|+|++++||+ +
T Consensus       150 al~~~~~~la~e~~~~-i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~~~~l~-s  227 (258)
T PRK06398        150 AVLGLTRSIAVDYAPT-IRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVGKPEEVAYVVAFLA-S  227 (258)
T ss_pred             HHHHHHHHHHHHhCCC-CEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhcCCcCCCcCHHHHHHHHHHHc-C
Confidence            9999999999999875 99999999999999764321       111    112234567888899999999999999 5


Q ss_pred             CCCCCccccEEEecCCcc
Q 024338          251 PAAGYITGQVLTIDGGMV  268 (269)
Q Consensus       251 ~~~~~~~G~~i~~dgg~~  268 (269)
                      +.+.+++|+++.+|||+.
T Consensus       228 ~~~~~~~G~~i~~dgg~~  245 (258)
T PRK06398        228 DLASFITGECVTVDGGLR  245 (258)
T ss_pred             cccCCCCCcEEEECCccc
Confidence            667799999999999975

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=100.00  E-value=1.5e-42  Score=290.54  Aligned_cols=242  Identities=43%  Similarity=0.743  Sum_probs=211.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      ++++|++|||||+++||.+++++|+++|++|+++ .|+.  ..+..+.+++.+.++.++++|+++.++++++++++.+.+
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~-~r~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (248)
T TIGR01832         2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGA-GRSE--PSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEF   78 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEE-cCch--HHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            5789999999999999999999999999998885 5654  234455555556778899999999999999999999999


Q ss_pred             CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCeEEEEcCCccccCCCCChhhHHhHH
Q 024338          103 GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK-KGRIINIASVVGLVGNIGQANYSAAKA  181 (269)
Q Consensus       103 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK~  181 (269)
                      +++|++|||||.....++.+.+.+++++.+++|+.+++.++++++|.|.+++ .+++|++||..+..+.++...|++||+
T Consensus        79 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKa  158 (248)
T TIGR01832        79 GHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASKH  158 (248)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCCCchhHHHHH
Confidence            9999999999988777778889999999999999999999999999997665 689999999999988889999999999


Q ss_pred             HHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC--hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCcccc
Q 024338          182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG--EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQ  259 (269)
Q Consensus       182 al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~  259 (269)
                      +++.++++++.|+.++||+|++|+||+++|++.....  ....+...+..|.+++.+|+|+|+++++|+ ++...+++|+
T Consensus       159 a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~-s~~~~~~~G~  237 (248)
T TIGR01832       159 GVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDRNAAILERIPAGRWGTPDDIGGPAVFLA-SSASDYVNGY  237 (248)
T ss_pred             HHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHc-CccccCcCCc
Confidence            9999999999999999999999999999999765332  222234455678888999999999999999 5567799999


Q ss_pred             EEEecCCcc
Q 024338          260 VLTIDGGMV  268 (269)
Q Consensus       260 ~i~~dgg~~  268 (269)
                      ++.+|||+.
T Consensus       238 ~i~~dgg~~  246 (248)
T TIGR01832       238 TLAVDGGWL  246 (248)
T ss_pred             EEEeCCCEe
Confidence            999999975

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-42  Score=292.40  Aligned_cols=245  Identities=36%  Similarity=0.606  Sum_probs=219.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      +++++|+++||||+++||.+++++|+++|++|+++ .|+.+.+++..+.++..+.++.++++|++|.++++++++++.+.
T Consensus         6 ~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   84 (265)
T PRK07097          6 FSLKGKIALITGASYGIGFAIAKAYAKAGATIVFN-DINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKE   84 (265)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEE-eCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            56789999999999999999999999999998885 88888888888888776778999999999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKA  181 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  181 (269)
                      ++++|+||||||.....++.+.+.+++++.+++|+.+++.+++.++|+|.+++.++||++||..+..+.++...|+++|+
T Consensus        85 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKa  164 (265)
T PRK07097         85 VGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKG  164 (265)
T ss_pred             CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCCCCccHHHHHH
Confidence            99999999999998777888899999999999999999999999999998878899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccCh--------HHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCC
Q 024338          182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGE--------DLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAA  253 (269)
Q Consensus       182 al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~  253 (269)
                      +++.++++++.|+.++||+|++|+||+++|++......        ...+......|.+++.+|+|+|+++++|++ +..
T Consensus       165 al~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~-~~~  243 (265)
T PRK07097        165 GLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPAARWGDPEDLAGPAVFLAS-DAS  243 (265)
T ss_pred             HHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCCccCCcCHHHHHHHHHHHhC-ccc
Confidence            99999999999999999999999999999997643211        222334456677888999999999999994 456


Q ss_pred             CCccccEEEecCCcc
Q 024338          254 GYITGQVLTIDGGMV  268 (269)
Q Consensus       254 ~~~~G~~i~~dgg~~  268 (269)
                      .+++|+.+.+|||++
T Consensus       244 ~~~~g~~~~~~gg~~  258 (265)
T PRK07097        244 NFVNGHILYVDGGIL  258 (265)
T ss_pred             CCCCCCEEEECCCce
Confidence            789999999999975

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=100.00  E-value=3.1e-42  Score=289.95  Aligned_cols=245  Identities=33%  Similarity=0.555  Sum_probs=217.9

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      .+.+++|+++||||+++||.+++++|+++|+++++ ..|+.+..+++.++++..+.++.++.+|++|.++++++++++.+
T Consensus         6 ~~~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~-~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   84 (255)
T PRK06113          6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVV-SDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALS   84 (255)
T ss_pred             ccCcCCCEEEEECCCchHHHHHHHHHHHCCCeEEE-EeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            34678999999999999999999999999999888 47777778778888776667888999999999999999999999


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhH
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                      .++++|++|||||.....++ +.+.+++++.+++|+.+++.++++++|+|.+.+.++||++||..+..+.++...|+++|
T Consensus        85 ~~~~~d~li~~ag~~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  163 (255)
T PRK06113         85 KLGKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSK  163 (255)
T ss_pred             HcCCCCEEEECCCCCCCCCC-CCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCcchhHHHH
Confidence            99999999999998655544 67889999999999999999999999999777778999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc-ChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCcccc
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL-GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQ  259 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~  259 (269)
                      +++++|+++++.++.+.||+|++|+||+++|++.... .+.......+..+++++.+|+|++++++||+ ++.+.+++|+
T Consensus       164 ~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~-~~~~~~~~G~  242 (255)
T PRK06113        164 AAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLC-SPAASWVSGQ  242 (255)
T ss_pred             HHHHHHHHHHHHHhhhhCeEEEEEecccccccccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHc-CccccCccCC
Confidence            9999999999999999999999999999999987643 3344444556678888899999999999999 5678899999


Q ss_pred             EEEecCCcc
Q 024338          260 VLTIDGGMV  268 (269)
Q Consensus       260 ~i~~dgg~~  268 (269)
                      +|.+|||..
T Consensus       243 ~i~~~gg~~  251 (255)
T PRK06113        243 ILTVSGGGV  251 (255)
T ss_pred             EEEECCCcc
Confidence            999999964

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=100.00  E-value=2.9e-42  Score=288.51  Aligned_cols=245  Identities=36%  Similarity=0.622  Sum_probs=219.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      +++|+++||||+++||++++++|+++|+.|+++.+++.+..++..+++...+.++..+.+|++|.++++++++++.+.++
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVG   80 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            46899999999999999999999999999888666667677777777776677888899999999999999999999999


Q ss_pred             CccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHH
Q 024338          104 TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGV  183 (269)
Q Consensus       104 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al  183 (269)
                      ++|+||||||.....++.+.+.+++++.+++|+.+++.+++.++|.|.+++.++||++||..+..+.++...|+++|+++
T Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sK~a~  160 (246)
T PRK12938         81 EIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGI  160 (246)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCCCCChhHHHHHHHH
Confidence            99999999998766778888999999999999999999999999999877778999999999999999999999999999


Q ss_pred             HHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEEEe
Q 024338          184 IGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTI  263 (269)
Q Consensus       184 ~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~  263 (269)
                      +.|+++++.++.+.||++++|+||+++|++.+...++..+......+.++..+|++++++++||+ ++...+++|+.+.+
T Consensus       161 ~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~-~~~~~~~~g~~~~~  239 (246)
T PRK12938        161 HGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATIPVRRLGSPDEIGSIVAWLA-SEESGFSTGADFSL  239 (246)
T ss_pred             HHHHHHHHHHhhhhCeEEEEEEecccCCchhhhcChHHHHHHHhcCCccCCcCHHHHHHHHHHHc-CcccCCccCcEEEE
Confidence            99999999999999999999999999999876555555555556677788889999999999999 45567899999999


Q ss_pred             cCCccC
Q 024338          264 DGGMVM  269 (269)
Q Consensus       264 dgg~~~  269 (269)
                      |||+.+
T Consensus       240 ~~g~~~  245 (246)
T PRK12938        240 NGGLHM  245 (246)
T ss_pred             CCcccC
Confidence            999764

>PRK08226 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-42  Score=292.11  Aligned_cols=245  Identities=35%  Similarity=0.586  Sum_probs=213.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      +.+++|+++||||+++||++++++|+++|++|+++ +|+.+ ..+..+++.+.+.++.++.+|+++.++++++++++.++
T Consensus         2 ~~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~-~r~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   79 (263)
T PRK08226          2 GKLTGKTALITGALQGIGEGIARVFARHGANLILL-DISPE-IEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEK   79 (263)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEe-cCCHH-HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            45789999999999999999999999999998874 77764 44455555555667888999999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcc-ccCCCCChhhHHhH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVG-LVGNIGQANYSAAK  180 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~-~~~~~~~~~Y~~sK  180 (269)
                      ++++|++|||||.....++.+.+.+++++.+++|+.+++.+++.++|.|.+++.+++|++||..+ ..+.+++..|+.+|
T Consensus        80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~~sK  159 (263)
T PRK08226         80 EGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTK  159 (263)
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCCCCcchHHHHH
Confidence            99999999999987777788889999999999999999999999999998777889999999887 45678889999999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC--------hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCC
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG--------EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPA  252 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~  252 (269)
                      +++++++++++.|+.++||+|++|+||+++|++.....        +..........|++++.+|+|+|+.+.||+ ++.
T Consensus       160 ~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~-~~~  238 (263)
T PRK08226        160 AAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPLEVGELAAFLA-SDE  238 (263)
T ss_pred             HHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCCCCCCCCHHHHHHHHHHHc-Cch
Confidence            99999999999999999999999999999999764321        223344556678888999999999999998 566


Q ss_pred             CCCccccEEEecCCccC
Q 024338          253 AGYITGQVLTIDGGMVM  269 (269)
Q Consensus       253 ~~~~~G~~i~~dgg~~~  269 (269)
                      +.+++|++|.+|||+++
T Consensus       239 ~~~~~g~~i~~dgg~~~  255 (263)
T PRK08226        239 SSYLTGTQNVIDGGSTL  255 (263)
T ss_pred             hcCCcCceEeECCCccc
Confidence            78999999999999864

>PRK06128 oxidoreductase; Provisional

Probab=100.00  E-value=3.1e-42  Score=296.63  Aligned_cols=243  Identities=30%  Similarity=0.472  Sum_probs=212.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCC--HHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARS--SKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~--~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      .+++|++|||||++|||+++++.|+++|++|+++ .++  ....+++.+.++..+.++.++.+|++|.++++++++++.+
T Consensus        52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  130 (300)
T PRK06128         52 RLQGRKALITGADSGIGRATAIAFAREGADIALN-YLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVK  130 (300)
T ss_pred             ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEE-eCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999875 443  2345566667766677888999999999999999999999


Q ss_pred             hcCCccEEEEccCCCC-CCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHh
Q 024338          101 AWGTVDILINNAGITR-DTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAA  179 (269)
Q Consensus       101 ~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  179 (269)
                      .++++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|.|.  ++++||++||..+..+.++...|++|
T Consensus       131 ~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~--~~~~iv~~sS~~~~~~~~~~~~Y~as  208 (300)
T PRK06128        131 ELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLP--PGASIINTGSIQSYQPSPTLLDYAST  208 (300)
T ss_pred             HhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcC--cCCEEEEECCccccCCCCCchhHHHH
Confidence            9999999999999753 35678889999999999999999999999999984  35799999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc--ChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCcc
Q 024338          180 KAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL--GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYIT  257 (269)
Q Consensus       180 K~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~  257 (269)
                      |++++.|+++++.|+.+.||+|++|+||+++|++....  .++..+.+....|++++..|+|+|.+++||+ ++...+++
T Consensus       209 K~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~-s~~~~~~~  287 (300)
T PRK06128        209 KAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSETPMKRPGQPVEMAPLYVLLA-SQESSYVT  287 (300)
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCCHHHHHHHhcCCCCCCCcCHHHHHHHHHHHh-CccccCcc
Confidence            99999999999999999999999999999999986432  2344444555678899999999999999999 55677999


Q ss_pred             ccEEEecCCccC
Q 024338          258 GQVLTIDGGMVM  269 (269)
Q Consensus       258 G~~i~~dgg~~~  269 (269)
                      |++|.+|||+.+
T Consensus       288 G~~~~v~gg~~~  299 (300)
T PRK06128        288 GEVFGVTGGLLL  299 (300)
T ss_pred             CcEEeeCCCEeC
Confidence            999999999753

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.6e-43  Score=294.14  Aligned_cols=197  Identities=33%  Similarity=0.479  Sum_probs=180.7

Q ss_pred             ccccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcC-C-cEEEEEccCCCHHHHHHHH
Q 024338           18 NEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASG-G-QALTFGGDVSKEADVESMI   95 (269)
Q Consensus        18 ~~~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~-~-~~~~~~~Dls~~~~~~~~~   95 (269)
                      +..+.+++||+|+|||||+|||.++|++|+++|+++++ +.|..++++++.+++++.. . ++.+++||++|.+++++++
T Consensus         4 ~~~~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~l-var~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~   82 (282)
T KOG1205|consen    4 NLFMERLAGKVVLITGASSGIGEALAYELAKRGAKLVL-VARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFV   82 (282)
T ss_pred             cccHHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEE-eehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHH
Confidence            34567789999999999999999999999999999888 5788888888888887652 3 4899999999999999999


Q ss_pred             HHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChh
Q 024338           96 KTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQAN  175 (269)
Q Consensus        96 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~  175 (269)
                      +++..+||++|+||||||+.......+.+.+++...|++|+.|++.++++++|.|++++.|+||++||++|+.+.|....
T Consensus        83 ~~~~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~~~  162 (282)
T KOG1205|consen   83 EWAIRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFRSI  162 (282)
T ss_pred             HHHHHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCcccc
Confidence            99999999999999999998877788889999999999999999999999999998888899999999999999999999


Q ss_pred             hHHhHHHHHHHHHHHHHHhccCC--eEEEEEecCCccCCcccc
Q 024338          176 YSAAKAGVIGLTKTVAKEYASRN--INVNAIAPGFIASDMTAK  216 (269)
Q Consensus       176 Y~~sK~al~~~~~~la~e~~~~g--i~v~~v~pG~v~t~~~~~  216 (269)
                      |++||+|+.+|+++|+.|+.+.+  |++ .|+||+|+|++...
T Consensus       163 Y~ASK~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te~~~~  204 (282)
T KOG1205|consen  163 YSASKHALEGFFETLRQELIPLGTIIII-LVSPGPIETEFTGK  204 (282)
T ss_pred             cchHHHHHHHHHHHHHHHhhccCceEEE-EEecCceeecccch
Confidence            99999999999999999999987  666 99999999996543

>PRK07831 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.9e-42  Score=289.86  Aligned_cols=244  Identities=35%  Similarity=0.559  Sum_probs=216.7

Q ss_pred             CCCCCCEEEEeCCCC-chHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHc-C-CcEEEEEccCCCHHHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGASR-GIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS-G-GQALTFGGDVSKEADVESMIKTA   98 (269)
Q Consensus        22 ~~~~~k~vlItGas~-giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~-~-~~~~~~~~Dls~~~~~~~~~~~~   98 (269)
                      ..+++|++|||||+| |||+++++.|+++|++|++ ..|+.+.+++..+++++. + .++..+++|++++++++++++++
T Consensus        13 ~~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   91 (262)
T PRK07831         13 GLLAGKVVLVTAAAGTGIGSATARRALEEGARVVI-SDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAA   91 (262)
T ss_pred             cccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEE-EeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence            446789999999985 9999999999999999887 578887777777777652 3 46888999999999999999999


Q ss_pred             HHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCeEEEEcCCccccCCCCChhhH
Q 024338           99 VDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK-KGRIINIASVVGLVGNIGQANYS  177 (269)
Q Consensus        99 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~~~Y~  177 (269)
                      .+.++++|++|||||.....++.+.+.++|++.+++|+.+++.+++.++|.|..+. .++||+++|..+..+.++...|+
T Consensus        92 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~  171 (262)
T PRK07831         92 VERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHYA  171 (262)
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCCcchH
Confidence            99999999999999987667788889999999999999999999999999998765 78999999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc-ChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCc
Q 024338          178 AAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL-GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYI  256 (269)
Q Consensus       178 ~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~  256 (269)
                      ++|+++++|+++++.|++++||+|++|+||+++|++.... .++..+...+..+++++.+|+|+|++++||+ ++.++++
T Consensus       172 ~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~r~~~p~~va~~~~~l~-s~~~~~i  250 (262)
T PRK07831        172 AAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTSAELLDELAAREAFGRAAEPWEVANVIAFLA-SDYSSYL  250 (262)
T ss_pred             HHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHc-CchhcCc
Confidence            9999999999999999999999999999999999986543 3444455566778889999999999999999 5667899


Q ss_pred             cccEEEecCCc
Q 024338          257 TGQVLTIDGGM  267 (269)
Q Consensus       257 ~G~~i~~dgg~  267 (269)
                      ||++|.+|+|+
T Consensus       251 tG~~i~v~~~~  261 (262)
T PRK07831        251 TGEVVSVSSQH  261 (262)
T ss_pred             CCceEEeCCCC
Confidence            99999999986

>PRK06125 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-42  Score=290.64  Aligned_cols=242  Identities=30%  Similarity=0.484  Sum_probs=211.8

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHc-CCcEEEEEccCCCHHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS-GGQALTFGGDVSKEADVESMIKTAV   99 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dls~~~~~~~~~~~~~   99 (269)
                      .+++++|+++|||+++|||+++++.|+++|++|++ .+|+.+..+++.+++... +.++.++.+|++|.+++++++++  
T Consensus         2 ~~~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~--   78 (259)
T PRK06125          2 DLHLAGKRVLITGASKGIGAAAAEAFAAEGCHLHL-VARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAE--   78 (259)
T ss_pred             CcCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEE-EeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHH--
Confidence            35678999999999999999999999999999888 478888888887777654 55788899999999999888764  


Q ss_pred             HhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHh
Q 024338          100 DAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAA  179 (269)
Q Consensus       100 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  179 (269)
                        ++++|++|||+|.....++.+.+.++|++.+++|+.+++.++++++|.|.+++.++||++||..+..+.+++..|+++
T Consensus        79 --~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  156 (259)
T PRK06125         79 --AGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDADYICGSAG  156 (259)
T ss_pred             --hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCCCCCchHhHHH
Confidence              478999999999877778889999999999999999999999999999988778899999999999888889999999


Q ss_pred             HHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc----------ChHHHHHHHhcCCCCCCCCHHHHHHHHHHhcc
Q 024338          180 KAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL----------GEDLEKKILEKIPLGRYGQPEEVAGLVEFLAL  249 (269)
Q Consensus       180 K~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~  249 (269)
                      |+++++++++++.|+.+.||+|++|+||+++|++....          .+...+......|.+++.+|+|+|++++||+ 
T Consensus       157 k~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~-  235 (259)
T PRK06125        157 NAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLPLGRPATPEEVADLVAFLA-  235 (259)
T ss_pred             HHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhccCCcCCCcCHHHHHHHHHHHc-
Confidence            99999999999999999999999999999999964321          1222234445668888899999999999998 


Q ss_pred             CCCCCCccccEEEecCCcc
Q 024338          250 NPAAGYITGQVLTIDGGMV  268 (269)
Q Consensus       250 ~~~~~~~~G~~i~~dgg~~  268 (269)
                      ++++++++|++|.+|||+.
T Consensus       236 ~~~~~~~~G~~i~vdgg~~  254 (259)
T PRK06125        236 SPRSGYTSGTVVTVDGGIS  254 (259)
T ss_pred             CchhccccCceEEecCCee
Confidence            5678899999999999964

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-42  Score=293.59  Aligned_cols=242  Identities=30%  Similarity=0.461  Sum_probs=206.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      +.+++|++|||||++|||++++++|+++|++|++ ..|+++.++++.+++   +.++.++++|++|.++++++++++.+.
T Consensus         2 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~-~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (263)
T PRK06200          2 GWLHGQVALITGGGSGIGRALVERFLAEGARVAV-LERSAEKLASLRQRF---GDHVLVVEGDVTSYADNQRAVDQTVDA   77 (263)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHHh
Confidence            4578999999999999999999999999999888 478887776665554   446788999999999999999999999


Q ss_pred             cCCccEEEEccCCCCC-CcccCCCHHH----HHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhh
Q 024338          102 WGTVDILINNAGITRD-TLLMRMKKSQ----WQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANY  176 (269)
Q Consensus       102 ~~~id~li~~ag~~~~-~~~~~~~~~~----~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y  176 (269)
                      ++++|++|||||+... .++.+.+.++    |++.+++|+.+++.+++.++|.|.++ .|+||++||..+..+.++...|
T Consensus        78 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~Y  156 (263)
T PRK06200         78 FGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKAS-GGSMIFTLSNSSFYPGGGGPLY  156 (263)
T ss_pred             cCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhc-CCEEEEECChhhcCCCCCCchh
Confidence            9999999999997542 4555666655    88999999999999999999998654 5899999999999999999999


Q ss_pred             HHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc-----------ChHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 024338          177 SAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL-----------GEDLEKKILEKIPLGRYGQPEEVAGLVE  245 (269)
Q Consensus       177 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~a~~~~  245 (269)
                      ++||++++.|+++++.|+++ +|+||+|+||+++|++....           .+...+......|++++.+|+|+|++++
T Consensus       157 ~~sK~a~~~~~~~la~el~~-~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~eva~~~~  235 (263)
T PRK06200        157 TASKHAVVGLVRQLAYELAP-KIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPLQFAPQPEDHTGPYV  235 (263)
T ss_pred             HHHHHHHHHHHHHHHHHHhc-CcEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcCCCCCCCCCHHHHhhhhh
Confidence            99999999999999999988 49999999999999975321           1122344556678999999999999999


Q ss_pred             HhccCCCCCCccccEEEecCCccC
Q 024338          246 FLALNPAAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       246 ~l~~~~~~~~~~G~~i~~dgg~~~  269 (269)
                      ||++++++++++|++|.+|||+.+
T Consensus       236 fl~s~~~~~~itG~~i~vdgG~~~  259 (263)
T PRK06200        236 LLASRRNSRALTGVVINADGGLGI  259 (263)
T ss_pred             heecccccCcccceEEEEcCceee
Confidence            999543388999999999999853

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=6.3e-42  Score=288.15  Aligned_cols=246  Identities=36%  Similarity=0.613  Sum_probs=222.2

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      .+++++|+++||||+++||++++++|+++|++|++ ..|+.+.++++.++++..+.++.++.+|++|.+++.++++++.+
T Consensus         6 ~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   84 (256)
T PRK06124          6 RFSLAGQVALVTGSARGLGFEIARALAGAGAHVLV-NGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDA   84 (256)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEE-EeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            45688999999999999999999999999999888 58888888888888877777889999999999999999999999


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhH
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                      .++++|++|||+|.....++.+.+.+++++.+++|+.+++.+++.+++.|.+++.+++|++||..+..+.++...|+++|
T Consensus        85 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK  164 (256)
T PRK06124         85 EHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGDAVYPAAK  164 (256)
T ss_pred             hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCCCccHhHHHH
Confidence            99999999999998777778889999999999999999999999999999888889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc--ChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccc
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL--GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITG  258 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G  258 (269)
                      ++++.++++++.|+.+.||++++|+||+++|++....  .+...+......+.+++.+|+|++.++++|+ ++++++++|
T Consensus       165 ~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~-~~~~~~~~G  243 (256)
T PRK06124        165 QGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPAVGPWLAQRTPLGRWGRPEEIAGAAVFLA-SPAASYVNG  243 (256)
T ss_pred             HHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHc-CcccCCcCC
Confidence            9999999999999999999999999999999975433  2344445556678888999999999999999 556789999


Q ss_pred             cEEEecCCcc
Q 024338          259 QVLTIDGGMV  268 (269)
Q Consensus       259 ~~i~~dgg~~  268 (269)
                      +.|.+|||+.
T Consensus       244 ~~i~~dgg~~  253 (256)
T PRK06124        244 HVLAVDGGYS  253 (256)
T ss_pred             CEEEECCCcc
Confidence            9999999975

>PRK09242 tropinone reductase; Provisional

Probab=100.00  E-value=6.9e-42  Score=288.13  Aligned_cols=246  Identities=33%  Similarity=0.555  Sum_probs=220.1

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHc--CCcEEEEEccCCCHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS--GGQALTFGGDVSKEADVESMIKTA   98 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dls~~~~~~~~~~~~   98 (269)
                      +.++++|+++||||++|||+++++.|+++|++|++ .+|+.+..+++.+++...  +.++.++.+|+++.++++++++++
T Consensus         4 ~~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   82 (257)
T PRK09242          4 RWRLDGQTALITGASKGIGLAIAREFLGLGADVLI-VARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWV   82 (257)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEE-EeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence            34678999999999999999999999999999888 478888888888887665  567889999999999999999999


Q ss_pred             HHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHH
Q 024338           99 VDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSA  178 (269)
Q Consensus        99 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~  178 (269)
                      .+.++++|+||||||.....++.+.+.+++++.+++|+.+++.++++++|+|.+++.++||++||..+..+.++...|++
T Consensus        83 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~  162 (257)
T PRK09242         83 EDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPYGM  162 (257)
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCCCCcchHH
Confidence            99999999999999987666777889999999999999999999999999998877899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC--hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCc
Q 024338          179 AKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG--EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYI  256 (269)
Q Consensus       179 sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~  256 (269)
                      +|++++.++++++.|+.+.||++++|+||+++|++.....  ++..+......+.++..+|+|++.++.||++ +...++
T Consensus       163 sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~-~~~~~~  241 (257)
T PRK09242        163 TKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPMRRVGEPEEVAAAVAFLCM-PAASYI  241 (257)
T ss_pred             HHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-cccccc
Confidence            9999999999999999999999999999999999875432  3344445566788888999999999999994 566689


Q ss_pred             cccEEEecCCcc
Q 024338          257 TGQVLTIDGGMV  268 (269)
Q Consensus       257 ~G~~i~~dgg~~  268 (269)
                      +|+.+.+|||..
T Consensus       242 ~g~~i~~~gg~~  253 (257)
T PRK09242        242 TGQCIAVDGGFL  253 (257)
T ss_pred             cCCEEEECCCeE
Confidence            999999999975

>PRK08303 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-42  Score=298.31  Aligned_cols=241  Identities=25%  Similarity=0.373  Sum_probs=199.1

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCC----------HHHHHHHHHHHHHcCCcEEEEEccCCCHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARS----------SKEAEEVCKEIEASGGQALTFGGDVSKEAD   90 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~----------~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~   90 (269)
                      +.++++|+++||||++|||+++|+.|+++|++|+++ +|+          .+.++++.+++...+.++.++++|++|+++
T Consensus         3 ~~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~-~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~   81 (305)
T PRK08303          3 MKPLRGKVALVAGATRGAGRGIAVELGAAGATVYVT-GRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQ   81 (305)
T ss_pred             CcCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEE-ecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence            466889999999999999999999999999998885 665          245566667776666678889999999999


Q ss_pred             HHHHHHHHHHhcCCccEEEEcc-CCCC----CCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCc
Q 024338           91 VESMIKTAVDAWGTVDILINNA-GITR----DTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVV  165 (269)
Q Consensus        91 ~~~~~~~~~~~~~~id~li~~a-g~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  165 (269)
                      ++++++++.+++++||++|||| |...    ..++.+.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||..
T Consensus        82 v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~  161 (305)
T PRK08303         82 VRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGT  161 (305)
T ss_pred             HHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCcc
Confidence            9999999999999999999999 7531    2567778889999999999999999999999999877779999999976


Q ss_pred             ccc---CCCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc---ChHHHHHHHhcCC-CCCCCCHH
Q 024338          166 GLV---GNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL---GEDLEKKILEKIP-LGRYGQPE  238 (269)
Q Consensus       166 ~~~---~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~---~~~~~~~~~~~~~-~~~~~~~~  238 (269)
                      +..   +.++...|++||+|+.+|+++|+.|+++.||+||+|+||+++|++....   .+..........| .++..+|+
T Consensus       162 ~~~~~~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~p~~~~~~~pe  241 (305)
T PRK08303        162 AEYNATHYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVTEENWRDALAKEPHFAISETPR  241 (305)
T ss_pred             ccccCcCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccCccchhhhhccccccccCCCHH
Confidence            643   3345778999999999999999999999999999999999999975321   1111111122345 45667899


Q ss_pred             HHHHHHHHhccCCCCCCccccEEE
Q 024338          239 EVAGLVEFLALNPAAGYITGQVLT  262 (269)
Q Consensus       239 ~~a~~~~~l~~~~~~~~~~G~~i~  262 (269)
                      |+|++++||++++..+++|||+|.
T Consensus       242 evA~~v~fL~s~~~~~~itG~~l~  265 (305)
T PRK08303        242 YVGRAVAALAADPDVARWNGQSLS  265 (305)
T ss_pred             HHHHHHHHHHcCcchhhcCCcEEE
Confidence            999999999955445689999986

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.4e-41  Score=285.31  Aligned_cols=244  Identities=31%  Similarity=0.486  Sum_probs=210.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      |.+++|++|||||++|||+++++.|+++|++|+++..++.+..+++.+++   +.++.++++|++|.++++++++++.+.
T Consensus         1 ~~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (253)
T PRK08642          1 MQISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL---GDRAIALQADVTDREQVQAMFATATEH   77 (253)
T ss_pred             CCCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            45678999999999999999999999999999886566666655555444   357888999999999999999999998


Q ss_pred             cCC-ccEEEEccCCCC------CCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCCh
Q 024338          102 WGT-VDILINNAGITR------DTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQA  174 (269)
Q Consensus       102 ~~~-id~li~~ag~~~------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~  174 (269)
                      +++ +|++|||||...      ..++.+.+.+++++.+++|+.+++.+++.++|.|.+++.++||++||..+..+.++..
T Consensus        78 ~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  157 (253)
T PRK08642         78 FGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNPVVPYH  157 (253)
T ss_pred             hCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCcc
Confidence            887 999999998632      2457788899999999999999999999999999877779999999988887877888


Q ss_pred             hhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc-ChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCC
Q 024338          175 NYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL-GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAA  253 (269)
Q Consensus       175 ~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~  253 (269)
                      .|++||++++.++++++.++.+.||+||+|+||+++|+..... .+...+...+..|++++.+|+|+|+++.||+ ++.+
T Consensus       158 ~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~-~~~~  236 (253)
T PRK08642        158 DYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATPDEVFDLIAATTPLRKVTTPQEFADAVLFFA-SPWA  236 (253)
T ss_pred             chHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCCHHHHHHHHhcCCcCCCCCHHHHHHHHHHHc-Cchh
Confidence            9999999999999999999999999999999999999865432 2334444556778888999999999999999 4566


Q ss_pred             CCccccEEEecCCccC
Q 024338          254 GYITGQVLTIDGGMVM  269 (269)
Q Consensus       254 ~~~~G~~i~~dgg~~~  269 (269)
                      .+++|+.|.+|||+++
T Consensus       237 ~~~~G~~~~vdgg~~~  252 (253)
T PRK08642        237 RAVTGQNLVVDGGLVM  252 (253)
T ss_pred             cCccCCEEEeCCCeec
Confidence            7999999999999864

>PRK06841 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-41  Score=285.66  Aligned_cols=244  Identities=37%  Similarity=0.605  Sum_probs=213.2

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      ++++++|++|||||+++||.+++++|+++|++|++ ..|+.+. .+...++.  +.++..+.+|+++.++++++++++.+
T Consensus        10 ~~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~-~~r~~~~-~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~   85 (255)
T PRK06841         10 AFDLSGKVAVVTGGASGIGHAIAELFAAKGARVAL-LDRSEDV-AEVAAQLL--GGNAKGLVCDVSDSQSVEAAVAAVIS   85 (255)
T ss_pred             hcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEE-EeCCHHH-HHHHHHhh--CCceEEEEecCCCHHHHHHHHHHHHH
Confidence            35688999999999999999999999999999887 4777653 33333332  34567899999999999999999999


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhH
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                      .++++|++|||+|.....++.+.+.+++++.+++|+.+++.+++.+.|.|.+++.++||++||..+..+.++...|+++|
T Consensus        86 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  165 (255)
T PRK06841         86 AFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERHVAYCASK  165 (255)
T ss_pred             HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCCCchHHHHH
Confidence            99999999999998777777788999999999999999999999999999887789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc-ChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCcccc
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL-GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQ  259 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~  259 (269)
                      ++++.++++++.|++++||+|+.|+||+++|++.... .....+...+..|.+++.+|+|+|+++++|+ ++.+.+++|+
T Consensus       166 ~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~-~~~~~~~~G~  244 (255)
T PRK06841        166 AGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWAGEKGERAKKLIPAGRFAYPEEIAAAALFLA-SDAAAMITGE  244 (255)
T ss_pred             HHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccchhHHHHHHhcCCCCCCcCHHHHHHHHHHHc-CccccCccCC
Confidence            9999999999999999999999999999999976533 2223344556778889999999999999999 5677899999


Q ss_pred             EEEecCCccC
Q 024338          260 VLTIDGGMVM  269 (269)
Q Consensus       260 ~i~~dgg~~~  269 (269)
                      ++.+|||+.+
T Consensus       245 ~i~~dgg~~~  254 (255)
T PRK06841        245 NLVIDGGYTI  254 (255)
T ss_pred             EEEECCCccC
Confidence            9999999864

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=100.00  E-value=2.3e-42  Score=291.88  Aligned_cols=241  Identities=32%  Similarity=0.491  Sum_probs=202.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      |++++|+++||||++|||++++++|+++|++|++ ..|+.+.++++.+.   .+.++..+.+|++|.++++++++++.+.
T Consensus         1 m~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~-~~r~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~   76 (262)
T TIGR03325         1 MRLKGEVVLVTGGASGLGRAIVDRFVAEGARVAV-LDKSAAGLQELEAA---HGDAVVGVEGDVRSLDDHKEAVARCVAA   76 (262)
T ss_pred             CCcCCcEEEEECCCChHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHhh---cCCceEEEEeccCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999988 47877666655432   2456888999999999999999999999


Q ss_pred             cCCccEEEEccCCCCC-CcccCCCH----HHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhh
Q 024338          102 WGTVDILINNAGITRD-TLLMRMKK----SQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANY  176 (269)
Q Consensus       102 ~~~id~li~~ag~~~~-~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y  176 (269)
                      ++++|+||||||.... .++.+.+.    ++|++.+++|+.+++.++++++|.|.++ ++++|+++|..+..+.++...|
T Consensus        77 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~Y  155 (262)
T TIGR03325        77 FGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVAS-RGSVIFTISNAGFYPNGGGPLY  155 (262)
T ss_pred             hCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhc-CCCEEEEeccceecCCCCCchh
Confidence            9999999999997432 33333333    5799999999999999999999999764 4899999999999998899999


Q ss_pred             HHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc----Ch------HHHHHHHhcCCCCCCCCHHHHHHHHHH
Q 024338          177 SAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL----GE------DLEKKILEKIPLGRYGQPEEVAGLVEF  246 (269)
Q Consensus       177 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~----~~------~~~~~~~~~~~~~~~~~~~~~a~~~~~  246 (269)
                      ++||+++++|+++++.|+++. |+||+|+||+++|++....    .+      ...+......|++++.+|+|+|++++|
T Consensus       156 ~~sKaa~~~l~~~la~e~~~~-irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~~~  234 (262)
T TIGR03325       156 TAAKHAVVGLVKELAFELAPY-VRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPIGRMPDAEEYTGAYVF  234 (262)
T ss_pred             HHHHHHHHHHHHHHHHhhccC-eEEEEEecCCCcCCCccccccccccccccccchhhhhhhcCCCCCCCChHHhhhheee
Confidence            999999999999999999986 9999999999999975421    11      111223445789999999999999999


Q ss_pred             hccCCCCCCccccEEEecCCcc
Q 024338          247 LALNPAAGYITGQVLTIDGGMV  268 (269)
Q Consensus       247 l~~~~~~~~~~G~~i~~dgg~~  268 (269)
                      |++++.+.+++|++|.+|||+.
T Consensus       235 l~s~~~~~~~tG~~i~vdgg~~  256 (262)
T TIGR03325       235 FATRGDTVPATGAVLNYDGGMG  256 (262)
T ss_pred             eecCCCcccccceEEEecCCee
Confidence            9965556789999999999975

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK07677 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-41  Score=284.38  Aligned_cols=241  Identities=39%  Similarity=0.601  Sum_probs=210.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTV  105 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i  105 (269)
                      ||+++||||++|||+++++.|+++|++|++ ..|+.+.++++.+++...+.++.++.+|++|+++++++++++.+.++++
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~-~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVI-TGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRI   79 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCc
Confidence            689999999999999999999999999887 4788877877777777666788899999999999999999999999999


Q ss_pred             cEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCCeEEEEcCCccccCCCCChhhHHhHHHHH
Q 024338          106 DILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKK-KKGRIINIASVVGLVGNIGQANYSAAKAGVI  184 (269)
Q Consensus       106 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~  184 (269)
                      |++|||+|.....++.+.+.++|++.+++|+.+++.++++++|.|.++ ..++||++||..+..+.++...|++||++++
T Consensus        80 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sKaa~~  159 (252)
T PRK07677         80 DALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVL  159 (252)
T ss_pred             cEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCCCcchHHHHHHHH
Confidence            999999997655677888999999999999999999999999998654 4689999999999988889999999999999


Q ss_pred             HHHHHHHHHhcc-CCeEEEEEecCCccCCc-ccc--cChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccE
Q 024338          185 GLTKTVAKEYAS-RNINVNAIAPGFIASDM-TAK--LGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQV  260 (269)
Q Consensus       185 ~~~~~la~e~~~-~gi~v~~v~pG~v~t~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~  260 (269)
                      +|+++++.|+.+ .||++++|+||+++|+. ...  ..+...+...+..+++++.+|+|+++++.||++ +...+++|++
T Consensus       160 ~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~-~~~~~~~g~~  238 (252)
T PRK07677        160 AMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPLGRLGTPEEIAGLAYFLLS-DEAAYINGTC  238 (252)
T ss_pred             HHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhccCCCCCCCCHHHHHHHHHHHcC-ccccccCCCE
Confidence            999999999975 69999999999999643 221  123344455566788889999999999999984 5677999999


Q ss_pred             EEecCCcc
Q 024338          261 LTIDGGMV  268 (269)
Q Consensus       261 i~~dgg~~  268 (269)
                      +.+|||+.
T Consensus       239 ~~~~gg~~  246 (252)
T PRK07677        239 ITMDGGQW  246 (252)
T ss_pred             EEECCCee
Confidence            99999975

>PLN02253 xanthoxin dehydrogenase

Probab=100.00  E-value=9.7e-42  Score=290.77  Aligned_cols=253  Identities=34%  Similarity=0.515  Sum_probs=212.4

Q ss_pred             hhhhcccccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHH
Q 024338           13 IEQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVE   92 (269)
Q Consensus        13 ~~~~~~~~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~   92 (269)
                      ....+..+..++++|++|||||++|||++++++|+++|++|+++ +|+.+..+++.+++. .+.++.++++|++|.++++
T Consensus         5 ~~~~~~~~~~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~   82 (280)
T PLN02253          5 SSSASSLPSQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIV-DLQDDLGQNVCDSLG-GEPNVCFFHCDVTVEDDVS   82 (280)
T ss_pred             hhhhccccccccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHHHhc-CCCceEEEEeecCCHHHHH
Confidence            33445555678899999999999999999999999999999884 777766666666663 2457889999999999999


Q ss_pred             HHHHHHHHhcCCccEEEEccCCCCC--CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCC
Q 024338           93 SMIKTAVDAWGTVDILINNAGITRD--TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGN  170 (269)
Q Consensus        93 ~~~~~~~~~~~~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~  170 (269)
                      ++++++.+.++++|+||||||....  .++.+.+.+++++.+++|+.+++.++++++|.|.+++.|++|+++|..+..+.
T Consensus        83 ~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~  162 (280)
T PLN02253         83 RAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGG  162 (280)
T ss_pred             HHHHHHHHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccC
Confidence            9999999999999999999997543  45778899999999999999999999999999987778999999999999888


Q ss_pred             CCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC-h-----HHHH----HHHhcCCC-CCCCCHHH
Q 024338          171 IGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG-E-----DLEK----KILEKIPL-GRYGQPEE  239 (269)
Q Consensus       171 ~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~-~-----~~~~----~~~~~~~~-~~~~~~~~  239 (269)
                      ++...|++||++++.++++++.|+.+.||+|+.++||+++|++..... +     ....    ......++ +...+|+|
T Consensus       163 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~d  242 (280)
T PLN02253        163 LGPHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKGVELTVDD  242 (280)
T ss_pred             CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCCCcCCCCCHHH
Confidence            888999999999999999999999999999999999999998753211 1     1111    11112222 44568999


Q ss_pred             HHHHHHHhccCCCCCCccccEEEecCCcc
Q 024338          240 VAGLVEFLALNPAAGYITGQVLTIDGGMV  268 (269)
Q Consensus       240 ~a~~~~~l~~~~~~~~~~G~~i~~dgg~~  268 (269)
                      +|++++||+ ++.+.+++|++|.+|||+.
T Consensus       243 va~~~~~l~-s~~~~~i~G~~i~vdgG~~  270 (280)
T PLN02253        243 VANAVLFLA-SDEARYISGLNLMIDGGFT  270 (280)
T ss_pred             HHHHHHhhc-CcccccccCcEEEECCchh
Confidence            999999998 5567899999999999974

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-41  Score=286.10  Aligned_cols=243  Identities=35%  Similarity=0.524  Sum_probs=207.0

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      ...+++|++|||||++|||++++++|+++|++|+++ +|++ ...++.+++...+.++.++.+|++|.++++++++++.+
T Consensus         3 ~~~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~-~r~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (260)
T PRK12823          3 NQRFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLV-DRSE-LVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVE   80 (260)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEE-eCch-HHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHH
Confidence            345789999999999999999999999999998884 6764 34456666766667788999999999999999999999


Q ss_pred             hcCCccEEEEccCCCC-CCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHh
Q 024338          101 AWGTVDILINNAGITR-DTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAA  179 (269)
Q Consensus       101 ~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  179 (269)
                      .++++|++|||||... ..++.+.+.+++++.+++|+.+++.+++.++|.|.+++.++||++||..+.  .++...|++|
T Consensus        81 ~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~--~~~~~~Y~~s  158 (260)
T PRK12823         81 AFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATR--GINRVPYSAA  158 (260)
T ss_pred             HcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCcccc--CCCCCccHHH
Confidence            9999999999999653 467788899999999999999999999999999988778899999998764  2356789999


Q ss_pred             HHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccc---------c----ChHHHHHHHhcCCCCCCCCHHHHHHHHHH
Q 024338          180 KAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAK---------L----GEDLEKKILEKIPLGRYGQPEEVAGLVEF  246 (269)
Q Consensus       180 K~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~---------~----~~~~~~~~~~~~~~~~~~~~~~~a~~~~~  246 (269)
                      |++++.|+++++.|+++.||+|++|+||+++||+...         .    .+...+......|++++.+|+|+|++++|
T Consensus       159 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  238 (260)
T PRK12823        159 KGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMKRYGTIDEQVAAILF  238 (260)
T ss_pred             HHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCcccCCCHHHHHHHHHH
Confidence            9999999999999999999999999999999985211         0    01222334456788888999999999999


Q ss_pred             hccCCCCCCccccEEEecCCcc
Q 024338          247 LALNPAAGYITGQVLTIDGGMV  268 (269)
Q Consensus       247 l~~~~~~~~~~G~~i~~dgg~~  268 (269)
                      |+ ++...+++|+++.+|||.+
T Consensus       239 l~-s~~~~~~~g~~~~v~gg~~  259 (260)
T PRK12823        239 LA-SDEASYITGTVLPVGGGDL  259 (260)
T ss_pred             Hc-CcccccccCcEEeecCCCC
Confidence            99 5567799999999999974

>PRK12939 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-41  Score=282.75  Aligned_cols=247  Identities=39%  Similarity=0.601  Sum_probs=222.8

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      +..+++|+++||||+++||.++++.|+++|++++++ .|+++..++..+++++.+.++.++.+|++|.++++++++++.+
T Consensus         2 ~~~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   80 (250)
T PRK12939          2 ASNLAGKRALVTGAARGLGAAFAEALAEAGATVAFN-DGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAA   80 (250)
T ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            445789999999999999999999999999998885 7888888888888876677899999999999999999999999


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhH
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                      .++++|++|||+|.....++.+.+.+++++.++.|+.+++.+++.+.|.|.+++.+++|++||..+..+.++...|+++|
T Consensus        81 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK  160 (250)
T PRK12939         81 ALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPKLGAYVASK  160 (250)
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCCcchHHHHH
Confidence            99999999999998777778888999999999999999999999999999887789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccCh-HHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCcccc
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGE-DLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQ  259 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~  259 (269)
                      ++++.++++++.++.+.+|+++.|+||+++|++...... ...+......+.+++.+|+|+|+++++++. +..++++|+
T Consensus       161 ~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~-~~~~~~~G~  239 (250)
T PRK12939        161 GAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPADERHAYYLKGRALERLQVPDDVAGAVLFLLS-DAARFVTGQ  239 (250)
T ss_pred             HHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhC-ccccCccCc
Confidence            999999999999999999999999999999998765443 455555666788888999999999999995 456789999


Q ss_pred             EEEecCCccC
Q 024338          260 VLTIDGGMVM  269 (269)
Q Consensus       260 ~i~~dgg~~~  269 (269)
                      .|.+|||++|
T Consensus       240 ~i~~~gg~~~  249 (250)
T PRK12939        240 LLPVNGGFVM  249 (250)
T ss_pred             EEEECCCccc
Confidence            9999999986

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-41  Score=285.72  Aligned_cols=244  Identities=33%  Similarity=0.557  Sum_probs=213.5

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      +|.+++|++|||||+++||.++|+.|+++|++|++ ..|+.+..+++.+++   ..++.++.+|++|.++++++++++.+
T Consensus         1 ~~~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~-~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   76 (257)
T PRK07067          1 MMRLQGKVALLTGAASGIGEAVAERYLAEGARVVI-ADIKPARARLAALEI---GPAAIAVSLDVTRQDSIDRIVAAAVE   76 (257)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEE-EcCCHHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHH
Confidence            35678999999999999999999999999999888 478887777666554   34688899999999999999999999


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCeEEEEcCCccccCCCCChhhHHh
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK-KGRIINIASVVGLVGNIGQANYSAA  179 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~~~Y~~s  179 (269)
                      .++++|++|||||.....++.+.+.+++++.+++|+.+++.+++++++.|.+++ +++||++||..+..+.++...|++|
T Consensus        77 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  156 (257)
T PRK07067         77 RFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEALVSHYCAT  156 (257)
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCCCCchhhhh
Confidence            999999999999987767788889999999999999999999999999987653 5799999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC-----------hHHHHHHHhcCCCCCCCCHHHHHHHHHHhc
Q 024338          180 KAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG-----------EDLEKKILEKIPLGRYGQPEEVAGLVEFLA  248 (269)
Q Consensus       180 K~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~  248 (269)
                      |++++.++++++.|+.++||+++.|.||+++|++.+...           .+.........|++++.+|+|+|+++.||+
T Consensus       157 K~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  236 (257)
T PRK07067        157 KAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTGMALFLA  236 (257)
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCCCccCHHHHHHHHHHHh
Confidence            999999999999999999999999999999999754321           112233445678899999999999999999


Q ss_pred             cCCCCCCccccEEEecCCccC
Q 024338          249 LNPAAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       249 ~~~~~~~~~G~~i~~dgg~~~  269 (269)
                      + +...+++|++|.+|||..+
T Consensus       237 s-~~~~~~~g~~~~v~gg~~~  256 (257)
T PRK07067        237 S-ADADYIVAQTYNVDGGNWM  256 (257)
T ss_pred             C-cccccccCcEEeecCCEeC
Confidence            4 5677899999999999753

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.9e-42  Score=296.03  Aligned_cols=244  Identities=21%  Similarity=0.309  Sum_probs=193.8

Q ss_pred             ccCCCCCCEEEEeCCC--CchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHH----------HHcCC-----------
Q 024338           20 AAQNVEAPVAVVTGAS--RGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEI----------EASGG-----------   76 (269)
Q Consensus        20 ~~~~~~~k~vlItGas--~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l----------~~~~~-----------   76 (269)
                      ++.+++||+++|||++  +|||+++|+.|+++|++|++. .+.+ .+..+.+..          ...+.           
T Consensus         2 ~~~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~-~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~   79 (299)
T PRK06300          2 LKIDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVG-TWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMD   79 (299)
T ss_pred             CCcCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEE-eccc-hhhhhhhhcccccccccccccccchhhhhhHHHhh
Confidence            3567899999999995  999999999999999999884 3321 111110000          00000           


Q ss_pred             ----cEEEEEccCCC--------HHHHHHHHHHHHHhcCCccEEEEccCCCC--CCcccCCCHHHHHHHHHHHhHHHHHH
Q 024338           77 ----QALTFGGDVSK--------EADVESMIKTAVDAWGTVDILINNAGITR--DTLLMRMKKSQWQDVIDLNLTGVFLC  142 (269)
Q Consensus        77 ----~~~~~~~Dls~--------~~~~~~~~~~~~~~~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l  142 (269)
                          ...-+.+|+++        .++++++++++.+++|++|+||||||...  ..++.+.+.++|++.+++|+.+++.+
T Consensus        80 ~d~~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l  159 (299)
T PRK06300         80 ASFDTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSL  159 (299)
T ss_pred             hhcCCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHH
Confidence                11122222222        24689999999999999999999998754  46788999999999999999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEEcCCccccCCCCCh-hhHHhHHHHHHHHHHHHHHhcc-CCeEEEEEecCCccCCcccccC--
Q 024338          143 TQAAAKIMMKKKKGRIINIASVVGLVGNIGQA-NYSAAKAGVIGLTKTVAKEYAS-RNINVNAIAPGFIASDMTAKLG--  218 (269)
Q Consensus       143 ~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~-~Y~~sK~al~~~~~~la~e~~~-~gi~v~~v~pG~v~t~~~~~~~--  218 (269)
                      +++++|+|++  .|+||+++|..+..+.|+.. .|++||+|+++|+++++.|+++ .|||||+|+||+++|++.....  
T Consensus       160 ~~a~~p~m~~--~G~ii~iss~~~~~~~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~~~~  237 (299)
T PRK06300        160 LSHFGPIMNP--GGSTISLTYLASMRAVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIGFI  237 (299)
T ss_pred             HHHHHHHhhc--CCeEEEEeehhhcCcCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhccccc
Confidence            9999999954  47999999999998888875 8999999999999999999987 4999999999999999865322  


Q ss_pred             hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEEEecCCcc
Q 024338          219 EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMV  268 (269)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg~~  268 (269)
                      +...+......|+++..+|+|++++++||+ ++++.+++|+++.+|||+.
T Consensus       238 ~~~~~~~~~~~p~~r~~~peevA~~v~~L~-s~~~~~itG~~i~vdGG~~  286 (299)
T PRK06300        238 ERMVDYYQDWAPLPEPMEAEQVGAAAAFLV-SPLASAITGETLYVDHGAN  286 (299)
T ss_pred             HHHHHHHHhcCCCCCCcCHHHHHHHHHHHh-CccccCCCCCEEEECCCcc
Confidence            233334445678888899999999999999 5667899999999999975

>PRK07856 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-41  Score=283.74  Aligned_cols=236  Identities=32%  Similarity=0.521  Sum_probs=207.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      |++++|++|||||++|||++++++|+++|++|+++ .|+.+.        ...+.++.++++|+++.++++++++++.+.
T Consensus         2 ~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~-~r~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   72 (252)
T PRK07856          2 LDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVC-GRRAPE--------TVDGRPAEFHAADVRDPDQVAALVDAIVER   72 (252)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEE-eCChhh--------hhcCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            56889999999999999999999999999998885 666543        112456888999999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCCeEEEEcCCccccCCCCChhhHHhH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKK-KKGRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                      ++++|+||||||.....++.+.+.+++++.+++|+.+++.+++.+.|.|.++ ..++||++||..+..+.++...|+++|
T Consensus        73 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK  152 (252)
T PRK07856         73 HGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAK  152 (252)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCCCchhHHHH
Confidence            9999999999998776777888999999999999999999999999999764 458999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc--ChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccc
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL--GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITG  258 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G  258 (269)
                      ++++.|+++++.|+.+. |+++.|+||+++|++....  .++..+......|.++..+|+|+|++++||+ +++.++++|
T Consensus       153 ~a~~~l~~~la~e~~~~-i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~~L~-~~~~~~i~G  230 (252)
T PRK07856        153 AGLLNLTRSLAVEWAPK-VRVNAVVVGLVRTEQSELHYGDAEGIAAVAATVPLGRLATPADIAWACLFLA-SDLASYVSG  230 (252)
T ss_pred             HHHHHHHHHHHHHhcCC-eEEEEEEeccccChHHhhhccCHHHHHHHhhcCCCCCCcCHHHHHHHHHHHc-CcccCCccC
Confidence            99999999999999987 9999999999999975432  1233344556678888999999999999999 566779999


Q ss_pred             cEEEecCCcc
Q 024338          259 QVLTIDGGMV  268 (269)
Q Consensus       259 ~~i~~dgg~~  268 (269)
                      +.|.+|||+.
T Consensus       231 ~~i~vdgg~~  240 (252)
T PRK07856        231 ANLEVHGGGE  240 (252)
T ss_pred             CEEEECCCcc
Confidence            9999999975

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=6.2e-41  Score=280.58  Aligned_cols=246  Identities=44%  Similarity=0.767  Sum_probs=219.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      .++++|+++||||+++||.+++++|+++|++|+++..|+++..+++.+++++.+.++.++++|++|++++.++++++.+.
T Consensus         2 ~~~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (247)
T PRK12935          2 VQLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNH   81 (247)
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            34679999999999999999999999999999876566677777777778776778999999999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKA  181 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  181 (269)
                      ++++|+||||||......+.+.+.+.+++.+++|+.+++.+++.++|.|.+++.+++|++||..+..+.+++..|+++|+
T Consensus        82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  161 (247)
T PRK12935         82 FGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSAAKA  161 (247)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCCCCcchHHHHH
Confidence            99999999999987766777888999999999999999999999999998777889999999999999899999999999


Q ss_pred             HHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEE
Q 024338          182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL  261 (269)
Q Consensus       182 al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i  261 (269)
                      +++.++++++.++.+.||+++.++||+++|++.....+..........+.+.+..|+|+++.+++++.+  ..+++|+.+
T Consensus       162 a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~~~~~--~~~~~g~~~  239 (247)
T PRK12935        162 GMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEVPEEVRQKIVAKIPKKRFGQADEIAKGVVYLCRD--GAYITGQQL  239 (247)
T ss_pred             HHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhccHHHHHHHHHhCCCCCCcCHHHHHHHHHHHcCc--ccCccCCEE
Confidence            999999999999998999999999999999987665554445555566777888999999999999843  357999999


Q ss_pred             EecCCccC
Q 024338          262 TIDGGMVM  269 (269)
Q Consensus       262 ~~dgg~~~  269 (269)
                      .+|||..|
T Consensus       240 ~i~~g~~~  247 (247)
T PRK12935        240 NINGGLYM  247 (247)
T ss_pred             EeCCCccC
Confidence            99999865

>PRK12937 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.1e-41  Score=279.70  Aligned_cols=243  Identities=39%  Similarity=0.610  Sum_probs=217.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      |++++|+++||||+++||++++++|+++|++++++.+++++..+++.+++.+.+.++.++.+|+++.++++++++++.+.
T Consensus         1 ~~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (245)
T PRK12937          1 MTLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETA   80 (245)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            46789999999999999999999999999998886555666667777777777778999999999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKA  181 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  181 (269)
                      ++++|++|||||.....++.+.+.+++++.+++|+.+++.+++.++|.|.  ..+++|++||..+..+.+++..|+.+|+
T Consensus        81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~~ss~~~~~~~~~~~~Y~~sK~  158 (245)
T PRK12937         81 FGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLG--QGGRIINLSTSVIALPLPGYGPYAASKA  158 (245)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhc--cCcEEEEEeeccccCCCCCCchhHHHHH
Confidence            99999999999987767778889999999999999999999999999984  3589999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCeEEEEEecCCccCCccc-ccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccE
Q 024338          182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTA-KLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQV  260 (269)
Q Consensus       182 al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~  260 (269)
                      +++.++++++.++.+.||+++.++||+++|++.. ...+...+.+....|+++..+|+|+++.+.|++ ++.+.+++|++
T Consensus       159 a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~-~~~~~~~~g~~  237 (245)
T PRK12937        159 AVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGKSAEQIDQLAGLAPLERLGTPEEIAAAVAFLA-GPDGAWVNGQV  237 (245)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHc-CccccCccccE
Confidence            9999999999999999999999999999999853 333445556667788888899999999999999 55677999999


Q ss_pred             EEecCCc
Q 024338          261 LTIDGGM  267 (269)
Q Consensus       261 i~~dgg~  267 (269)
                      |.+|||+
T Consensus       238 ~~~~~g~  244 (245)
T PRK12937        238 LRVNGGF  244 (245)
T ss_pred             EEeCCCC
Confidence            9999986

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=7.7e-41  Score=280.41  Aligned_cols=245  Identities=36%  Similarity=0.549  Sum_probs=218.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      +++|+++||||+++||++++++|+++|++|+++..|+.+..+++.+++++.+.++.++.+|++|+++++++++++.+.++
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG   81 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            46799999999999999999999999999887668888888888888877777889999999999999999999999999


Q ss_pred             CccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHH
Q 024338          104 TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGV  183 (269)
Q Consensus       104 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al  183 (269)
                      ++|+||||+|.....++.+.+.++++..+++|+.+++.++++++|.|.+++.++||++||..+..+.++...|+++|+++
T Consensus        82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~a~  161 (250)
T PRK08063         82 RLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLENYTTVGVSKAAL  161 (250)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCccHHHHHHHHH
Confidence            99999999998777788889999999999999999999999999999888889999999999988889999999999999


Q ss_pred             HHHHHHHHHHhccCCeEEEEEecCCccCCcccccC--hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEE
Q 024338          184 IGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG--EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL  261 (269)
Q Consensus       184 ~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i  261 (269)
                      +.|+++++.++.+.||++++|+||+++|++.....  ....+......+.++..+++|+|+.++++++ +....++|+.+
T Consensus       162 ~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~-~~~~~~~g~~~  240 (250)
T PRK08063        162 EALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNREELLEDARAKTPAGRMVEPEDVANAVLFLCS-PEADMIRGQTI  240 (250)
T ss_pred             HHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCchHHHHHHhcCCCCCCCcCHHHHHHHHHHHcC-chhcCccCCEE
Confidence            99999999999999999999999999999865432  2233344455677778899999999999995 45567999999


Q ss_pred             EecCCccC
Q 024338          262 TIDGGMVM  269 (269)
Q Consensus       262 ~~dgg~~~  269 (269)
                      .+|||..+
T Consensus       241 ~~~gg~~~  248 (250)
T PRK08063        241 IVDGGRSL  248 (250)
T ss_pred             EECCCeee
Confidence            99999764

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=100.00  E-value=6.3e-41  Score=279.21  Aligned_cols=238  Identities=42%  Similarity=0.690  Sum_probs=211.5

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCccEE
Q 024338           29 AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDIL  108 (269)
Q Consensus        29 vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l  108 (269)
                      ++||||++|||.++|++|+++|++|+++..++.+..++..+++++.+.++.++++|++|.++++++++++.+.++++|++
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l   80 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV   80 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            58999999999999999999999998865666677777888887777789999999999999999999999999999999


Q ss_pred             EEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHH-HHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHHHHHH
Q 024338          109 INNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA-KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLT  187 (269)
Q Consensus       109 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~  187 (269)
                      |||+|.....++.+.+.++++..+++|+.+++.+++.++ |.+++++.++||++||..+..+.++...|+++|++++.++
T Consensus        81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~~~  160 (239)
T TIGR01831        81 VLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAGLIGAT  160 (239)
T ss_pred             EECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCCCCcchHHHHHHHHHHH
Confidence            999998776677788999999999999999999999875 5555567789999999999999999999999999999999


Q ss_pred             HHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEEEecCCc
Q 024338          188 KTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM  267 (269)
Q Consensus       188 ~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg~  267 (269)
                      ++++.|+.+.||++++|+||+++|++.....+. .+......|+++..+|+|+++++.||+ ++++.+++|+.+.+|||+
T Consensus       161 ~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~va~~~~~l~-~~~~~~~~g~~~~~~gg~  238 (239)
T TIGR01831       161 KALAVELAKRKITVNCIAPGLIDTEMLAEVEHD-LDEALKTVPMNRMGQPAEVASLAGFLM-SDGASYVTRQVISVNGGM  238 (239)
T ss_pred             HHHHHHHhHhCeEEEEEEEccCccccchhhhHH-HHHHHhcCCCCCCCCHHHHHHHHHHHc-CchhcCccCCEEEecCCc
Confidence            999999999999999999999999987654332 334455678888999999999999999 566789999999999997


Q ss_pred             c
Q 024338          268 V  268 (269)
Q Consensus       268 ~  268 (269)
                      +
T Consensus       239 ~  239 (239)
T TIGR01831       239 V  239 (239)
T ss_pred             C
Confidence            4

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK07576 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-40  Score=281.19  Aligned_cols=246  Identities=32%  Similarity=0.486  Sum_probs=213.4

Q ss_pred             ccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHH
Q 024338           20 AAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAV   99 (269)
Q Consensus        20 ~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~   99 (269)
                      +++++++|++|||||++|||.+++++|+++|++|+++ .|+.+.+++..+++...+.++.++.+|++|+++++++++++.
T Consensus         3 ~~~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~   81 (264)
T PRK07576          3 TMFDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVA-SRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIA   81 (264)
T ss_pred             ccccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEE-eCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHH
Confidence            4678999999999999999999999999999998884 788877777777776666677889999999999999999999


Q ss_pred             HhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHh
Q 024338          100 DAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAA  179 (269)
Q Consensus       100 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  179 (269)
                      +.++++|++|||||.....++.+.+.+++++.+++|+.+++.++++++|.|.++ +|+||++||..+..+.++...|+++
T Consensus        82 ~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~-~g~iv~iss~~~~~~~~~~~~Y~as  160 (264)
T PRK07576         82 DEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRP-GASIIQISAPQAFVPMPMQAHVCAA  160 (264)
T ss_pred             HHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCEEEEECChhhccCCCCccHHHHH
Confidence            999999999999997666677888999999999999999999999999998654 5899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCeEEEEEecCCcc-CCccccc-C-hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCc
Q 024338          180 KAGVIGLTKTVAKEYASRNINVNAIAPGFIA-SDMTAKL-G-EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYI  256 (269)
Q Consensus       180 K~al~~~~~~la~e~~~~gi~v~~v~pG~v~-t~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~  256 (269)
                      |++++.|+++++.|+.++||+|+.|+||+++ |+..... . ...........|+++...|+|+|+.+++|+ ++...++
T Consensus       161 K~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~-~~~~~~~  239 (264)
T PRK07576        161 KAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPSPELQAAVAQSVPLKRNGTKQDIANAALFLA-SDMASYI  239 (264)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHc-ChhhcCc
Confidence            9999999999999999999999999999997 5533222 1 122223334567788889999999999999 4566789


Q ss_pred             cccEEEecCCcc
Q 024338          257 TGQVLTIDGGMV  268 (269)
Q Consensus       257 ~G~~i~~dgg~~  268 (269)
                      +|+.+.+|||+.
T Consensus       240 ~G~~~~~~gg~~  251 (264)
T PRK07576        240 TGVVLPVDGGWS  251 (264)
T ss_pred             cCCEEEECCCcc
Confidence            999999999975

>PRK07890 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.8e-41  Score=281.05  Aligned_cols=245  Identities=31%  Similarity=0.441  Sum_probs=214.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      |.+++|+++||||+++||++++++|+++|++|++ ..|+++..+++.+++...+.++..+.+|++|.++++++++++.++
T Consensus         1 ~~l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (258)
T PRK07890          1 MLLKGKVVVVSGVGPGLGRTLAVRAARAGADVVL-AARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALER   79 (258)
T ss_pred             CccCCCEEEEECCCCcHHHHHHHHHHHcCCEEEE-EeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHH
Confidence            3467899999999999999999999999999888 478888888888888766778899999999999999999999999


Q ss_pred             cCCccEEEEccCCCCC-CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhH
Q 024338          102 WGTVDILINNAGITRD-TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       102 ~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                      ++++|++|||||.... .++.+.+.+++++.+++|+.+++.+++++.+.|.++ .++||++||..+..+.++...|+++|
T Consensus        80 ~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~ii~~sS~~~~~~~~~~~~Y~~sK  158 (258)
T PRK07890         80 FGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAES-GGSIVMINSMVLRHSQPKYGAYKMAK  158 (258)
T ss_pred             cCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC-CCEEEEEechhhccCCCCcchhHHHH
Confidence            9999999999997543 567788899999999999999999999999998654 47999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC-----------hHHHHHHHhcCCCCCCCCHHHHHHHHHHhcc
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG-----------EDLEKKILEKIPLGRYGQPEEVAGLVEFLAL  249 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~  249 (269)
                      ++++.++++++.|++++||++++++||++.|+......           +...+...+..+.+++.+|+|++++++++++
T Consensus       159 ~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~l~~  238 (258)
T PRK07890        159 GALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRLPTDDEVASAVLFLAS  238 (258)
T ss_pred             HHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcCCccccCCHHHHHHHHHHHcC
Confidence            99999999999999999999999999999998754321           2233344456777888899999999999995


Q ss_pred             CCCCCCccccEEEecCCccC
Q 024338          250 NPAAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       250 ~~~~~~~~G~~i~~dgg~~~  269 (269)
                       +...+++|++|.+|||+.+
T Consensus       239 -~~~~~~~G~~i~~~gg~~~  257 (258)
T PRK07890        239 -DLARAITGQTLDVNCGEYH  257 (258)
T ss_pred             -HhhhCccCcEEEeCCcccc
Confidence             4556899999999999864

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=5.3e-41  Score=309.50  Aligned_cols=239  Identities=38%  Similarity=0.654  Sum_probs=211.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      ...+|++|||||++|||+++|++|+++|++|++ .+|+.+.++++.+++   +.+...+.+|++|+++++++++++.+.+
T Consensus       266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~-~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~  341 (520)
T PRK06484        266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLI-IDRDAEGAKKLAEAL---GDEHLSVQADITDEAAVESAFAQIQARW  341 (520)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHh---CCceeEEEccCCCHHHHHHHHHHHHHHc
Confidence            457999999999999999999999999999888 478887777666554   4567789999999999999999999999


Q ss_pred             CCccEEEEccCCCC-CCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHH
Q 024338          103 GTVDILINNAGITR-DTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKA  181 (269)
Q Consensus       103 ~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  181 (269)
                      +++|+||||||... ..++.+.+.++|++.+++|+.+++.+++.++|.|  ++.|+||++||..+..+.++...|++||+
T Consensus       342 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~--~~~g~iv~isS~~~~~~~~~~~~Y~asKa  419 (520)
T PRK06484        342 GRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLM--SQGGVIVNLGSIASLLALPPRNAYCASKA  419 (520)
T ss_pred             CCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHh--ccCCEEEEECchhhcCCCCCCchhHHHHH
Confidence            99999999999864 3567788999999999999999999999999999  45689999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC---hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccc
Q 024338          182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG---EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITG  258 (269)
Q Consensus       182 al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G  258 (269)
                      ++++|+++++.|+.+.||+||+|+||+++|++.....   +...+...+..|++++.+|+|+|++++||+ ++.+.+++|
T Consensus       420 al~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~-s~~~~~~~G  498 (520)
T PRK06484        420 AVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPLGRLGDPEEVAEAIAFLA-SPAASYVNG  498 (520)
T ss_pred             HHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh-CccccCccC
Confidence            9999999999999999999999999999999865432   222344556778888899999999999999 556789999


Q ss_pred             cEEEecCCcc
Q 024338          259 QVLTIDGGMV  268 (269)
Q Consensus       259 ~~i~~dgg~~  268 (269)
                      ++|.+|||+.
T Consensus       499 ~~i~vdgg~~  508 (520)
T PRK06484        499 ATLTVDGGWT  508 (520)
T ss_pred             cEEEECCCcc
Confidence            9999999974

>PRK06523 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.6e-41  Score=281.58  Aligned_cols=237  Identities=32%  Similarity=0.490  Sum_probs=203.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      .+++||++|||||++|||++++++|+++|++|+++ .|+.+..         ...++.++++|++|.++++++++++.+.
T Consensus         5 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~-~r~~~~~---------~~~~~~~~~~D~~~~~~~~~~~~~~~~~   74 (260)
T PRK06523          5 LELAGKRALVTGGTKGIGAATVARLLEAGARVVTT-ARSRPDD---------LPEGVEFVAADLTTAEGCAAVARAVLER   74 (260)
T ss_pred             cCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEE-eCChhhh---------cCCceeEEecCCCCHHHHHHHHHHHHHH
Confidence            46889999999999999999999999999998885 6664321         1346778999999999999999999999


Q ss_pred             cCCccEEEEccCCCC--CCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCC-CChhhHH
Q 024338          102 WGTVDILINNAGITR--DTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNI-GQANYSA  178 (269)
Q Consensus       102 ~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~-~~~~Y~~  178 (269)
                      ++++|++|||||...  ..++.+.+.+++++.+++|+.+++.+++.++|.|++++.++||++||..+..+.+ +...|++
T Consensus        75 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~~Y~~  154 (260)
T PRK06523         75 LGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPESTTAYAA  154 (260)
T ss_pred             cCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCCcchhHH
Confidence            999999999999653  3557778899999999999999999999999999887789999999999988865 7899999


Q ss_pred             hHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccCh-----------HHHHHH---HhcCCCCCCCCHHHHHHHH
Q 024338          179 AKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGE-----------DLEKKI---LEKIPLGRYGQPEEVAGLV  244 (269)
Q Consensus       179 sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~-----------~~~~~~---~~~~~~~~~~~~~~~a~~~  244 (269)
                      +|++++.++++++.++.+.||++++|+||+++|++......           +..+..   ....|.++..+|+|+|+++
T Consensus       155 sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~  234 (260)
T PRK06523        155 AKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPLGRPAEPEEVAELI  234 (260)
T ss_pred             HHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCccCCCCCHHHHHHHH
Confidence            99999999999999999999999999999999997543211           111111   2346888889999999999


Q ss_pred             HHhccCCCCCCccccEEEecCCccC
Q 024338          245 EFLALNPAAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       245 ~~l~~~~~~~~~~G~~i~~dgg~~~  269 (269)
                      .||+ +++.++++|+.|.+|||+.+
T Consensus       235 ~~l~-s~~~~~~~G~~~~vdgg~~~  258 (260)
T PRK06523        235 AFLA-SDRAASITGTEYVIDGGTVP  258 (260)
T ss_pred             HHHh-CcccccccCceEEecCCccC
Confidence            9999 55677999999999999863

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.4e-40  Score=276.44  Aligned_cols=245  Identities=40%  Similarity=0.631  Sum_probs=216.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      |++++|++|||||+++||.+++++|+++|++|++ .+|+++..+++.+.+.. +.++.++.+|++|.++++++++++.++
T Consensus         1 ~~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~-~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   78 (251)
T PRK07231          1 MRLEGKVAIVTGASSGIGEGIARRFAAEGARVVV-TDRNEEAAERVAAEILA-GGRAIAVAADVSDEADVEAAVAAALER   78 (251)
T ss_pred             CCcCCcEEEEECCCChHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999877 58888777777777654 567889999999999999999999999


Q ss_pred             cCCccEEEEccCCCC-CCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhH
Q 024338          102 WGTVDILINNAGITR-DTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       102 ~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                      ++++|+||||+|... ..++.+.+.+++++.+++|+.+++.+++.+++.|.+++.+++|++||..+..+.++...|+.+|
T Consensus        79 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk  158 (251)
T PRK07231         79 FGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPGLGWYNASK  158 (251)
T ss_pred             hCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCCCchHHHHHH
Confidence            999999999999754 3557788999999999999999999999999999888889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccCh----HHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCc
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGE----DLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYI  256 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~  256 (269)
                      ++++.++++++.++.+.||++++++||+++|++......    .....+....+.+++.+|+|+|+++++|+ ++...++
T Consensus       159 ~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~-~~~~~~~  237 (251)
T PRK07231        159 GAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATIPLGRLGTPEDIANAALFLA-SDEASWI  237 (251)
T ss_pred             HHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcCCCCCCCcCHHHHHHHHHHHh-CccccCC
Confidence            999999999999999889999999999999998655433    33444556677888889999999999999 4456689


Q ss_pred             cccEEEecCCccC
Q 024338          257 TGQVLTIDGGMVM  269 (269)
Q Consensus       257 ~G~~i~~dgg~~~  269 (269)
                      +|+.|.+|||..+
T Consensus       238 ~g~~~~~~gg~~~  250 (251)
T PRK07231        238 TGVTLVVDGGRCV  250 (251)
T ss_pred             CCCeEEECCCccC
Confidence            9999999999764

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=4.4e-40  Score=277.42  Aligned_cols=246  Identities=42%  Similarity=0.664  Sum_probs=217.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      +++++|++|||||+++||.++++.|+++|++|++ ..|+.+.+++..+++...+.++.++.+|++|.++++++++++.+.
T Consensus         8 ~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~-~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~   86 (259)
T PRK08213          8 FDLSGKTALVTGGSRGLGLQIAEALGEAGARVVL-SARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLER   86 (259)
T ss_pred             hCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEE-EeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999877 578888888777777766678889999999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHH-HHhCCCCeEEEEcCCccccCCCC----Chhh
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKI-MMKKKKGRIINIASVVGLVGNIG----QANY  176 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-l~~~~~~~iv~isS~~~~~~~~~----~~~Y  176 (269)
                      ++++|++|||||.....+..+.+.+.+++.+++|+.+++.+++++.|. |.+++.+++|++||..+..+.++    ...|
T Consensus        87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~~~~~~~Y  166 (259)
T PRK08213         87 FGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAY  166 (259)
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCccccCcchH
Confidence            999999999999876667778899999999999999999999999998 76667789999999888776654    4899


Q ss_pred             HHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCc
Q 024338          177 SAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYI  256 (269)
Q Consensus       177 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~  256 (269)
                      +.+|++++.++++++.++.+.||+++.++||+++|++.....+...+......+..++.+|+++++++.+|+ ++.+.++
T Consensus       167 ~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~-~~~~~~~  245 (259)
T PRK08213        167 NTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGTLERLGEDLLAHTPLGRLGDDEDLKGAALLLA-SDASKHI  245 (259)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh-CccccCc
Confidence            999999999999999999999999999999999999866555555555666778888889999999999998 5667799


Q ss_pred             cccEEEecCCccC
Q 024338          257 TGQVLTIDGGMVM  269 (269)
Q Consensus       257 ~G~~i~~dgg~~~  269 (269)
                      +|+.+.+|||+++
T Consensus       246 ~G~~~~~~~~~~~  258 (259)
T PRK08213        246 TGQILAVDGGVSA  258 (259)
T ss_pred             cCCEEEECCCeec
Confidence            9999999999763

>PRK06940 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-40  Score=282.74  Aligned_cols=229  Identities=31%  Similarity=0.454  Sum_probs=195.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTV  105 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i  105 (269)
                      +|+++|||+ +|||+++|+.|+ +|++|+++ +|+.+.++++.++++..+.++.++.+|++|.++++++++++ +.++++
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~-~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~-~~~g~i   77 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLA-DYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATA-QTLGPV   77 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEE-eCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHH-HhcCCC
Confidence            589999998 699999999996 89999884 78887787777777766668889999999999999999998 567899


Q ss_pred             cEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCC---------------
Q 024338          106 DILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGN---------------  170 (269)
Q Consensus       106 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~---------------  170 (269)
                      |+||||||...       ..+++++.+++|+.+++.+++.+.|.|.+  .+++|++||..+..+.               
T Consensus        78 d~li~nAG~~~-------~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~  148 (275)
T PRK06940         78 TGLVHTAGVSP-------SQASPEAILKVDLYGTALVLEEFGKVIAP--GGAGVVIASQSGHRLPALTAEQERALATTPT  148 (275)
T ss_pred             CEEEECCCcCC-------chhhHHHHHHHhhHHHHHHHHHHHHHHhh--CCCEEEEEecccccCcccchhhhcccccccc
Confidence            99999999742       23679999999999999999999999954  4788999998887642               


Q ss_pred             ---------------CCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc-C---hHHHHHHHhcCCC
Q 024338          171 ---------------IGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL-G---EDLEKKILEKIPL  231 (269)
Q Consensus       171 ---------------~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-~---~~~~~~~~~~~~~  231 (269)
                                     +++..|++||+|++.++++++.|+.++||+||+|+||+++|++.... .   ++..+......|+
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~  228 (275)
T PRK06940        149 EELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKSPA  228 (275)
T ss_pred             ccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhhCCc
Confidence                           24678999999999999999999999999999999999999976421 1   1223344456788


Q ss_pred             CCCCCHHHHHHHHHHhccCCCCCCccccEEEecCCcc
Q 024338          232 GRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMV  268 (269)
Q Consensus       232 ~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg~~  268 (269)
                      +++.+|+|+|++++||+ ++.++++||+.|.+|||+.
T Consensus       229 ~r~~~peeia~~~~fL~-s~~~~~itG~~i~vdgg~~  264 (275)
T PRK06940        229 GRPGTPDEIAALAEFLM-GPRGSFITGSDFLVDGGAT  264 (275)
T ss_pred             ccCCCHHHHHHHHHHHc-CcccCcccCceEEEcCCeE
Confidence            89999999999999999 5677899999999999974

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=100.00  E-value=4.3e-41  Score=284.69  Aligned_cols=236  Identities=33%  Similarity=0.520  Sum_probs=202.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      +++++|++|||||++|||++++++|+++|++|+++ .++.....         ..++.++.+|++|.++++++++++.+.
T Consensus         5 ~~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~-~~~~~~~~---------~~~~~~~~~D~~~~~~~~~~~~~~~~~   74 (266)
T PRK06171          5 LNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNA-DIHGGDGQ---------HENYQFVPTDVSSAEEVNHTVAEIIEK   74 (266)
T ss_pred             ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEE-eCCccccc---------cCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999885 55543321         236778999999999999999999999


Q ss_pred             cCCccEEEEccCCCCCC---------cccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCC
Q 024338          102 WGTVDILINNAGITRDT---------LLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIG  172 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~---------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~  172 (269)
                      ++++|++|||||.....         ++.+.+.++|++.+++|+.+++.++++++|.|.+++.++||++||..+..+.++
T Consensus        75 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  154 (266)
T PRK06171         75 FGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEG  154 (266)
T ss_pred             cCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCC
Confidence            99999999999975432         234678999999999999999999999999998878899999999999999999


Q ss_pred             ChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCcc-CCcccccC------------hHHHHHHHh--cCCCCCCCCH
Q 024338          173 QANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIA-SDMTAKLG------------EDLEKKILE--KIPLGRYGQP  237 (269)
Q Consensus       173 ~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~-t~~~~~~~------------~~~~~~~~~--~~~~~~~~~~  237 (269)
                      ...|+++|++++.++++++.|+++.||+||+|+||+++ |++.....            .+..+...+  ..|+++...|
T Consensus       155 ~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~  234 (266)
T PRK06171        155 QSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIPLGRSGKL  234 (266)
T ss_pred             CchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhcccccccCCCCCCH
Confidence            99999999999999999999999999999999999997 55532110            112223333  6788999999


Q ss_pred             HHHHHHHHHhccCCCCCCccccEEEecCCcc
Q 024338          238 EEVAGLVEFLALNPAAGYITGQVLTIDGGMV  268 (269)
Q Consensus       238 ~~~a~~~~~l~~~~~~~~~~G~~i~~dgg~~  268 (269)
                      +|+|+++.||+ ++.++++||++|.+|||+.
T Consensus       235 ~eva~~~~fl~-s~~~~~itG~~i~vdgg~~  264 (266)
T PRK06171        235 SEVADLVCYLL-SDRASYITGVTTNIAGGKT  264 (266)
T ss_pred             HHhhhheeeee-ccccccceeeEEEecCccc
Confidence            99999999999 5677899999999999985

>PRK06949 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.9e-40  Score=277.37  Aligned_cols=243  Identities=36%  Similarity=0.583  Sum_probs=215.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      ++++|+++||||+++||.+++++|+++|++|++ ..|+.+.++++.+++...+.++.++.+|+++.++++++++++.+.+
T Consensus         6 ~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~-~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (258)
T PRK06949          6 NLEGKVALVTGASSGLGARFAQVLAQAGAKVVL-ASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEA   84 (258)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence            477999999999999999999999999999887 4788888888887776666778899999999999999999999999


Q ss_pred             CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC--------CCeEEEEcCCccccCCCCCh
Q 024338          103 GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK--------KGRIINIASVVGLVGNIGQA  174 (269)
Q Consensus       103 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--------~~~iv~isS~~~~~~~~~~~  174 (269)
                      +++|++|||+|.....++.+.+.++++..+++|+.+++.++++++|.|.++.        .+++|++||..+..+.+...
T Consensus        85 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~  164 (258)
T PRK06949         85 GTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQIG  164 (258)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCCCcc
Confidence            9999999999987666777888999999999999999999999999987653        47999999999998889999


Q ss_pred             hhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc-ChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCC
Q 024338          175 NYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL-GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAA  253 (269)
Q Consensus       175 ~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~  253 (269)
                      .|+++|++++.++++++.++.+.||+|++|+||+++|++.... ............+.++...|+|+++.+.||+ ++.+
T Consensus       165 ~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~-~~~~  243 (258)
T PRK06949        165 LYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWETEQGQKLVSMLPRKRVGKPEDLDGLLLLLA-ADES  243 (258)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHh-Chhh
Confidence            9999999999999999999999999999999999999986533 2233344555668888999999999999999 5677


Q ss_pred             CCccccEEEecCCc
Q 024338          254 GYITGQVLTIDGGM  267 (269)
Q Consensus       254 ~~~~G~~i~~dgg~  267 (269)
                      .+++|++|.+|||+
T Consensus       244 ~~~~G~~i~~dgg~  257 (258)
T PRK06949        244 QFINGAIISADDGF  257 (258)
T ss_pred             cCCCCcEEEeCCCC
Confidence            89999999999996

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=100.00  E-value=5.8e-40  Score=274.09  Aligned_cols=243  Identities=43%  Similarity=0.694  Sum_probs=213.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      +++++|+++||||+++||+++++.|+++|+.|++ ..|+.+.++++.+.+   +.++.++.+|+++.++++++++++.+.
T Consensus         2 ~~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~-~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (245)
T PRK12936          2 FDLSGRKALVTGASGGIGEEIARLLHAQGAIVGL-HGTRVEKLEALAAEL---GERVKIFPANLSDRDEVKALGQKAEAD   77 (245)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEE-EcCCHHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            4678999999999999999999999999998776 477777776655444   456788999999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKA  181 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  181 (269)
                      ++++|++|||||...+.++.+.+.+++++.+++|+.+++.+++++.+.+.+++.+++|++||..+..+.++...|+.+|+
T Consensus        78 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sk~  157 (245)
T PRK12936         78 LEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPGQANYCASKA  157 (245)
T ss_pred             cCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCCCcchHHHHH
Confidence            99999999999987777777888999999999999999999999999887777899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEE
Q 024338          182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL  261 (269)
Q Consensus       182 al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i  261 (269)
                      ++..+++.++.++.+.|+++++++||+++|++.....+...+......+.+++.+|+++++.+.+|++ +...+++|++|
T Consensus       158 a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~~-~~~~~~~G~~~  236 (245)
T PRK12936        158 GMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLNDKQKEAIMGAIPMKRMGTGAEVASAVAYLAS-SEAAYVTGQTI  236 (245)
T ss_pred             HHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcccChHHHHHHhcCCCCCCCcCHHHHHHHHHHHcC-ccccCcCCCEE
Confidence            99999999999999999999999999999998765544444444556788888899999999999984 45668999999


Q ss_pred             EecCCccC
Q 024338          262 TIDGGMVM  269 (269)
Q Consensus       262 ~~dgg~~~  269 (269)
                      .+|||+++
T Consensus       237 ~~~~g~~~  244 (245)
T PRK12936        237 HVNGGMAM  244 (245)
T ss_pred             EECCCccc
Confidence            99999863

>PRK06483 dihydromonapterin reductase; Provisional

Probab=100.00  E-value=3e-40  Score=274.72  Aligned_cols=232  Identities=25%  Similarity=0.310  Sum_probs=197.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTV  105 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i  105 (269)
                      +|++|||||++|||++++++|+++|++|+++ .|+++..   .+.+...+  +.++.+|++|.++++++++++.+.++++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~-~r~~~~~---~~~~~~~~--~~~~~~D~~~~~~~~~~~~~~~~~~~~i   75 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVS-YRTHYPA---IDGLRQAG--AQCIQADFSTNAGIMAFIDELKQHTDGL   75 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEE-eCCchhH---HHHHHHcC--CEEEEcCCCCHHHHHHHHHHHHhhCCCc
Confidence            5899999999999999999999999999885 6665433   23333322  5678999999999999999999999999


Q ss_pred             cEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC--CCeEEEEcCCccccCCCCChhhHHhHHHH
Q 024338          106 DILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK--KGRIINIASVVGLVGNIGQANYSAAKAGV  183 (269)
Q Consensus       106 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~iv~isS~~~~~~~~~~~~Y~~sK~al  183 (269)
                      |++|||||........+.+.++|++.+++|+.+++.+++.++|.|.+++  .++||++||..+..+.++...|++||+++
T Consensus        76 d~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~asKaal  155 (236)
T PRK06483         76 RAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDKHIAYAASKAAL  155 (236)
T ss_pred             cEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCCCccHHHHHHHH
Confidence            9999999986555556778999999999999999999999999997765  68999999999998999999999999999


Q ss_pred             HHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEEEe
Q 024338          184 IGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTI  263 (269)
Q Consensus       184 ~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~  263 (269)
                      ++|+++++.|+++ +||||+|+||++.|+...  .+...+......++++...|+|+|+++.||++   ..+++|++|.+
T Consensus       156 ~~l~~~~a~e~~~-~irvn~v~Pg~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~---~~~~~G~~i~v  229 (236)
T PRK06483        156 DNMTLSFAAKLAP-EVKVNSIAPALILFNEGD--DAAYRQKALAKSLLKIEPGEEEIIDLVDYLLT---SCYVTGRSLPV  229 (236)
T ss_pred             HHHHHHHHHHHCC-CcEEEEEccCceecCCCC--CHHHHHHHhccCccccCCCHHHHHHHHHHHhc---CCCcCCcEEEe
Confidence            9999999999988 599999999999876421  22333334455678888899999999999994   46899999999


Q ss_pred             cCCccC
Q 024338          264 DGGMVM  269 (269)
Q Consensus       264 dgg~~~  269 (269)
                      |||+.+
T Consensus       230 dgg~~~  235 (236)
T PRK06483        230 DGGRHL  235 (236)
T ss_pred             Cccccc
Confidence            999864

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=100.00  E-value=8e-40  Score=274.14  Aligned_cols=244  Identities=36%  Similarity=0.634  Sum_probs=218.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      +++|++|||||+++||.+++++|+++|++|++ ..|+.+..+++.+++.+.+.++.++.+|++|.++++++++++.+.++
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~   79 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAV-FDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALG   79 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEE-ecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999999887 47888887777777776667889999999999999999999999999


Q ss_pred             CccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHH
Q 024338          104 TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGV  183 (269)
Q Consensus       104 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al  183 (269)
                      ++|++|||+|.....++.+.+.+++++.+++|+.+++.+++.+.+.|.+++.+++|++||..+..+.++...|+.+|+++
T Consensus        80 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~~~~Y~~sK~a~  159 (250)
T TIGR03206        80 PVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSGEAVYAACKGGL  159 (250)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCCCchHHHHHHHH
Confidence            99999999998766777888899999999999999999999999999877788999999999999999999999999999


Q ss_pred             HHHHHHHHHHhccCCeEEEEEecCCccCCcccccC------hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCcc
Q 024338          184 IGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG------EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYIT  257 (269)
Q Consensus       184 ~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~  257 (269)
                      +.++++++.++.+.||+++.++||+++|++.....      ......+....+.+++.+|+|+|+++.+|+ ++...+++
T Consensus       160 ~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~-~~~~~~~~  238 (250)
T TIGR03206       160 VAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPLGRLGQPDDLPGAILFFS-SDDASFIT  238 (250)
T ss_pred             HHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCCccCCcCHHHHHHHHHHHc-CcccCCCc
Confidence            99999999999988999999999999999754321      223445566778888889999999999998 45677999


Q ss_pred             ccEEEecCCccC
Q 024338          258 GQVLTIDGGMVM  269 (269)
Q Consensus       258 G~~i~~dgg~~~  269 (269)
                      |++|.+|||.++
T Consensus       239 g~~~~~~~g~~~  250 (250)
T TIGR03206       239 GQVLSVSGGLTM  250 (250)
T ss_pred             CcEEEeCCCccC
Confidence            999999999865

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=5.5e-40  Score=276.78  Aligned_cols=242  Identities=34%  Similarity=0.569  Sum_probs=210.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcC--CcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASG--GQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      +|++|||||+++||.+++++|+++|++|++ ++|+.+..+++.+++....  .++.++.+|++|.++++++++++.+.++
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   80 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAV-ADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFG   80 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            689999999999999999999999999887 5788777777777765542  4688999999999999999999999999


Q ss_pred             CccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCeEEEEcCCccccCCCCChhhHHhHHH
Q 024338          104 TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK-KGRIINIASVVGLVGNIGQANYSAAKAG  182 (269)
Q Consensus       104 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK~a  182 (269)
                      ++|++|||||.....++.+.+.+++++.+++|+.+++.+++++++.|.+++ .+++|++||..+..+.+....|++||+|
T Consensus        81 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sKaa  160 (259)
T PRK12384         81 RVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFG  160 (259)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCCCCchhHHHHHH
Confidence            999999999988777788899999999999999999999999999998766 6899999999988888889999999999


Q ss_pred             HHHHHHHHHHHhccCCeEEEEEecCCc-cCCcccccC-----------hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccC
Q 024338          183 VIGLTKTVAKEYASRNINVNAIAPGFI-ASDMTAKLG-----------EDLEKKILEKIPLGRYGQPEEVAGLVEFLALN  250 (269)
Q Consensus       183 l~~~~~~la~e~~~~gi~v~~v~pG~v-~t~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~  250 (269)
                      ++.++++++.|+++.||+|++|+||.+ .+++.....           ++..+...+..+.+++.+|+|+++++++|++ 
T Consensus       161 ~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~l~~-  239 (259)
T PRK12384        161 GVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVLNMLLFYAS-  239 (259)
T ss_pred             HHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccCCCCHHHHHHHHHHHcC-
Confidence            999999999999999999999999975 666543221           2223334556788999999999999999994 


Q ss_pred             CCCCCccccEEEecCCccC
Q 024338          251 PAAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       251 ~~~~~~~G~~i~~dgg~~~  269 (269)
                      +.+.+++|++|.+|||..+
T Consensus       240 ~~~~~~~G~~~~v~~g~~~  258 (259)
T PRK12384        240 PKASYCTGQSINVTGGQVM  258 (259)
T ss_pred             cccccccCceEEEcCCEEe
Confidence            5667899999999999753

>PRK08628 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.7e-40  Score=277.07  Aligned_cols=243  Identities=29%  Similarity=0.431  Sum_probs=208.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      .++++|++|||||+++||++++++|+++|++|+++ .|+++.. ++.+++...+.++.++.+|+++.++++++++++.+.
T Consensus         3 ~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~-~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (258)
T PRK08628          3 LNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIF-GRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAK   80 (258)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEE-cCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            57889999999999999999999999999999884 6776665 667777766778899999999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKA  181 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  181 (269)
                      ++++|++|||||......+.+.. +++++.+++|+.+++.+++.++|.|.++ .++|+++||..+..+.++...|++||+
T Consensus        81 ~~~id~vi~~ag~~~~~~~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~sK~  158 (258)
T PRK08628         81 FGRIDGLVNNAGVNDGVGLEAGR-EAFVASLERNLIHYYVMAHYCLPHLKAS-RGAIVNISSKTALTGQGGTSGYAAAKG  158 (258)
T ss_pred             cCCCCEEEECCcccCCCcccCCH-HHHHHHHhhhhHHHHHHHHHHHHHhhcc-CcEEEEECCHHhccCCCCCchhHHHHH
Confidence            99999999999976555555555 8999999999999999999999988643 589999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC------hHHHHHHHhcCCCC-CCCCHHHHHHHHHHhccCCCCC
Q 024338          182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG------EDLEKKILEKIPLG-RYGQPEEVAGLVEFLALNPAAG  254 (269)
Q Consensus       182 al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~------~~~~~~~~~~~~~~-~~~~~~~~a~~~~~l~~~~~~~  254 (269)
                      +++.++++++.|+.+.||+++.|+||.++|++.....      ........+..+.+ ++.+|+|+|+++++++ ++.+.
T Consensus       159 a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~-~~~~~  237 (258)
T PRK08628        159 AQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGHRMTTAEEIADTAVFLL-SERSS  237 (258)
T ss_pred             HHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCCccccCCCHHHHHHHHHHHh-Chhhc
Confidence            9999999999999999999999999999999754321      11222333445553 6789999999999999 44667


Q ss_pred             CccccEEEecCCccC
Q 024338          255 YITGQVLTIDGGMVM  269 (269)
Q Consensus       255 ~~~G~~i~~dgg~~~  269 (269)
                      +++|+.+.+|||+.+
T Consensus       238 ~~~g~~~~~~gg~~~  252 (258)
T PRK08628        238 HTTGQWLFVDGGYVH  252 (258)
T ss_pred             cccCceEEecCCccc
Confidence            899999999999763

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=100.00  E-value=1.2e-39  Score=271.63  Aligned_cols=242  Identities=45%  Similarity=0.692  Sum_probs=216.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCcc
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVD  106 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id  106 (269)
                      |++|||||+++||.+++++|+++|++++++.+++++..+++.+++...+.++.++.+|++|+++++++++++.+.++++|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID   80 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence            78999999999999999999999999988655466667666666665567889999999999999999999999999999


Q ss_pred             EEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHHHHH
Q 024338          107 ILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGL  186 (269)
Q Consensus       107 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~~  186 (269)
                      +||||+|...+..+.+.+.+++++.+++|+.+++.+++.++|.|.+++.++||++||..+..+.++...|+++|++++.+
T Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sk~a~~~~  160 (242)
T TIGR01829        81 VLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGMIGF  160 (242)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCcchhHHHHHHHHHH
Confidence            99999998776677888999999999999999999999999999887888999999999999999999999999999999


Q ss_pred             HHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEEEecCC
Q 024338          187 TKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGG  266 (269)
Q Consensus       187 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg  266 (269)
                      +++++.++.+.||+++.+.||+++|++.....+..........+.+++.+|+++++.+.||++ ++..+++|+.|.+|||
T Consensus       161 ~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~-~~~~~~~G~~~~~~gg  239 (242)
T TIGR01829       161 TKALAQEGATKGVTVNTISPGYIATDMVMAMREDVLNSIVAQIPVGRLGRPEEIAAAVAFLAS-EEAGYITGATLSINGG  239 (242)
T ss_pred             HHHHHHHhhhhCeEEEEEeeCCCcCccccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHcC-chhcCccCCEEEecCC
Confidence            999999999999999999999999998776655555556666788888999999999999985 4566899999999999


Q ss_pred             ccC
Q 024338          267 MVM  269 (269)
Q Consensus       267 ~~~  269 (269)
                      .+|
T Consensus       240 ~~~  242 (242)
T TIGR01829       240 LYM  242 (242)
T ss_pred             ccC
Confidence            875

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=1e-39  Score=272.58  Aligned_cols=241  Identities=44%  Similarity=0.686  Sum_probs=213.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCC-HHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARS-SKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTV  105 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~-~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i  105 (269)
                      |+++||||+++||+++|+.|+++|++|+++ .|+ .+...++...+...+.++.++.+|++|.++++++++++.++++++
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~i   81 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIAT-YFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPV   81 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEE-eCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            789999999999999999999999999885 555 333444444444445678899999999999999999999999999


Q ss_pred             cEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHHHH
Q 024338          106 DILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIG  185 (269)
Q Consensus       106 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~  185 (269)
                      |++|||+|.....++.+.+.+++++.+++|+.+++.+++.++|.|++++.+++|++||..+..+.++...|+++|+++++
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~Y~~sK~a~~~  161 (245)
T PRK12824         82 DILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGMIG  161 (245)
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCCCChHHHHHHHHHHH
Confidence            99999999877777888899999999999999999999999999988788999999999999999999999999999999


Q ss_pred             HHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEEEecC
Q 024338          186 LTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDG  265 (269)
Q Consensus       186 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dg  265 (269)
                      |+++++.++.+.||+++.++||+++|++.....+...+......+.++..+++++++++.+|+ ++.+.+++|+.+.+||
T Consensus       162 ~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~-~~~~~~~~G~~~~~~~  240 (245)
T PRK12824        162 FTKALASEGARYGITVNCIAPGYIATPMVEQMGPEVLQSIVNQIPMKRLGTPEEIAAAVAFLV-SEAAGFITGETISING  240 (245)
T ss_pred             HHHHHHHHHHHhCeEEEEEEEcccCCcchhhcCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHc-CccccCccCcEEEECC
Confidence            999999999999999999999999999877666665556666778888889999999999998 4456789999999999


Q ss_pred             CccC
Q 024338          266 GMVM  269 (269)
Q Consensus       266 g~~~  269 (269)
                      |+.|
T Consensus       241 g~~~  244 (245)
T PRK12824        241 GLYM  244 (245)
T ss_pred             Ceec
Confidence            9865

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=4.7e-40  Score=283.75  Aligned_cols=243  Identities=42%  Similarity=0.619  Sum_probs=206.3

Q ss_pred             ccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHH
Q 024338           20 AAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAV   99 (269)
Q Consensus        20 ~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~   99 (269)
                      +..++++|+++||||++|||+++|++|+++|++|++...++.+..+++.++++..+.++..+.+|++|.++++++++++.
T Consensus         6 ~~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~   85 (306)
T PRK07792          6 NTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAV   85 (306)
T ss_pred             CCcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHH
Confidence            34678999999999999999999999999999998854445566777788887777788999999999999999999999


Q ss_pred             HhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-------CCCeEEEEcCCccccCCCC
Q 024338          100 DAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKK-------KKGRIINIASVVGLVGNIG  172 (269)
Q Consensus       100 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-------~~~~iv~isS~~~~~~~~~  172 (269)
                      + ++++|+||||||......+.+.+.++|++.+++|+.+++.++++++|+|+++       ..|+||++||..+..+.++
T Consensus        86 ~-~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  164 (306)
T PRK07792         86 G-LGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVG  164 (306)
T ss_pred             H-hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCCCC
Confidence            8 9999999999999877778889999999999999999999999999999653       1379999999999999999


Q ss_pred             ChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCC
Q 024338          173 QANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPA  252 (269)
Q Consensus       173 ~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~  252 (269)
                      ...|+++|++++.|+++++.|+.+.||+||+|+|| ..|++.........+.....   ....+|++++..+.||+ ++.
T Consensus       165 ~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg-~~t~~~~~~~~~~~~~~~~~---~~~~~pe~va~~v~~L~-s~~  239 (306)
T PRK07792        165 QANYGAAKAGITALTLSAARALGRYGVRANAICPR-ARTAMTADVFGDAPDVEAGG---IDPLSPEHVVPLVQFLA-SPA  239 (306)
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCC-CCCchhhhhccccchhhhhc---cCCCCHHHHHHHHHHHc-Ccc
Confidence            99999999999999999999999999999999999 48887543221111110111   11237999999999999 556


Q ss_pred             CCCccccEEEecCCcc
Q 024338          253 AGYITGQVLTIDGGMV  268 (269)
Q Consensus       253 ~~~~~G~~i~~dgg~~  268 (269)
                      +.+++|+++.+|||+.
T Consensus       240 ~~~~tG~~~~v~gg~~  255 (306)
T PRK07792        240 AAEVNGQVFIVYGPMV  255 (306)
T ss_pred             ccCCCCCEEEEcCCeE
Confidence            6789999999999964

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=100.00  E-value=5.2e-40  Score=275.70  Aligned_cols=238  Identities=32%  Similarity=0.451  Sum_probs=209.1

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      .+++++|++|||||+++||.+++++|+++|++|+++ .|+.         +...+.++.++++|++|.++++++++++.+
T Consensus         3 ~~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~-~~~~---------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   72 (252)
T PRK08220          3 AMDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGF-DQAF---------LTQEDYPFATFVLDVSDAAAVAQVCQRLLA   72 (252)
T ss_pred             ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEE-ecch---------hhhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            467889999999999999999999999999999885 5554         222356788899999999999999999999


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhH
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                      +++++|++|||+|.....++.+.+.+++++.+++|+.+++.++++++|.|.+++.++||++||..+..+.++...|+++|
T Consensus        73 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK  152 (252)
T PRK08220         73 ETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIGMAAYGASK  152 (252)
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCCCchhHHHH
Confidence            99999999999998777778888999999999999999999999999999888889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccCh-H---------HHHHHHhcCCCCCCCCHHHHHHHHHHhccC
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGE-D---------LEKKILEKIPLGRYGQPEEVAGLVEFLALN  250 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~-~---------~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~  250 (269)
                      ++++.|+++++.|+.+.||+|+.+.||+++|++...... .         ..+......|.+++.+|+|+|+++++|+ +
T Consensus       153 ~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~-~  231 (252)
T PRK08220        153 AALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQEIANAVLFLA-S  231 (252)
T ss_pred             HHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcCCCcccCCHHHHHHHHHHHh-c
Confidence            999999999999999999999999999999997543211 0         1233444567788899999999999999 5


Q ss_pred             CCCCCccccEEEecCCccC
Q 024338          251 PAAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       251 ~~~~~~~G~~i~~dgg~~~  269 (269)
                      +...+++|++|.+|||.+|
T Consensus       232 ~~~~~~~g~~i~~~gg~~~  250 (252)
T PRK08220        232 DLASHITLQDIVVDGGATL  250 (252)
T ss_pred             chhcCccCcEEEECCCeec
Confidence            5677999999999999865

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.2e-39  Score=274.28  Aligned_cols=242  Identities=33%  Similarity=0.454  Sum_probs=208.6

Q ss_pred             CCCCCCEEEEeCCCC--chHHHHHHHHHHcCCcEEEEecCC-----------HHHHHHHHHHHHHcCCcEEEEEccCCCH
Q 024338           22 QNVEAPVAVVTGASR--GIGRAVATSLGKAGCKVLVNYARS-----------SKEAEEVCKEIEASGGQALTFGGDVSKE   88 (269)
Q Consensus        22 ~~~~~k~vlItGas~--giG~~~a~~l~~~G~~v~i~~~r~-----------~~~~~~~~~~l~~~~~~~~~~~~Dls~~   88 (269)
                      +.+++|++|||||++  |||.+++++|+++|++|+++ .|+           .+....+.+++...+.++.++.+|+++.
T Consensus         1 ~~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   79 (256)
T PRK12748          1 LPLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFT-YWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQP   79 (256)
T ss_pred             CCCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEE-cCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCH
Confidence            356789999999994  99999999999999998885 554           2222235555655567889999999999


Q ss_pred             HHHHHHHHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcccc
Q 024338           89 ADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLV  168 (269)
Q Consensus        89 ~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~  168 (269)
                      ++++++++++.+.++++|+||||||.....++.+.+.+++++.+++|+.+++.+.+++++.|.++..+++|++||..+..
T Consensus        80 ~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~  159 (256)
T PRK12748         80 YAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLG  159 (256)
T ss_pred             HHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccC
Confidence            99999999999999999999999998777778888999999999999999999999999999777778999999999998


Q ss_pred             CCCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhc
Q 024338          169 GNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLA  248 (269)
Q Consensus       169 ~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~  248 (269)
                      +.++...|+++|++++.++++++.|+.+.||+|++++||+++|++...   ..........+.++..+|+++|+.+.+|+
T Consensus       160 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~---~~~~~~~~~~~~~~~~~~~~~a~~~~~l~  236 (256)
T PRK12748        160 PMPDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITE---ELKHHLVPKFPQGRVGEPVDAARLIAFLV  236 (256)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCCh---hHHHhhhccCCCCCCcCHHHHHHHHHHHh
Confidence            888999999999999999999999999999999999999999996442   22233344556667789999999999998


Q ss_pred             cCCCCCCccccEEEecCCcc
Q 024338          249 LNPAAGYITGQVLTIDGGMV  268 (269)
Q Consensus       249 ~~~~~~~~~G~~i~~dgg~~  268 (269)
                       ++.+.+++|+++.+|||+.
T Consensus       237 -~~~~~~~~g~~~~~d~g~~  255 (256)
T PRK12748        237 -SEEAKWITGQVIHSEGGFS  255 (256)
T ss_pred             -CcccccccCCEEEecCCcc
Confidence             5567789999999999974

>PRK06701 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-39  Score=278.27  Aligned_cols=243  Identities=33%  Similarity=0.510  Sum_probs=211.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCC-HHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARS-SKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~-~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      .++++|++|||||+++||.+++++|+++|++|+++ +|+ .+..++..+.++..+.++.++.+|++|.++++++++++.+
T Consensus        42 ~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~-~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~  120 (290)
T PRK06701         42 GKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIV-YLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVR  120 (290)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE-eCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            57789999999999999999999999999998885 555 3445566666665567788999999999999999999999


Q ss_pred             hcCCccEEEEccCCCCC-CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHh
Q 024338          101 AWGTVDILINNAGITRD-TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAA  179 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  179 (269)
                      .++++|+||||||.... .++.+.+.+++++.+++|+.+++.+++++++.|.  +.+++|++||..+..+.++...|++|
T Consensus       121 ~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~--~~g~iV~isS~~~~~~~~~~~~Y~~s  198 (290)
T PRK06701        121 ELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLK--QGSAIINTGSITGYEGNETLIDYSAT  198 (290)
T ss_pred             HcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHh--hCCeEEEEecccccCCCCCcchhHHH
Confidence            99999999999997543 5677889999999999999999999999999984  34799999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc-ChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccc
Q 024338          180 KAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL-GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITG  258 (269)
Q Consensus       180 K~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G  258 (269)
                      |++++.++++++.++.+.||+|++|+||+++|++.... .++..+......+.+++.+|+|+|+++++|+ ++.+.+++|
T Consensus       199 K~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ll-~~~~~~~~G  277 (290)
T PRK06701        199 KGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFDEEKVSQFGSNTPMQRPGQPEELAPAYVFLA-SPDSSYITG  277 (290)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccccCHHHHHHHHhcCCcCCCcCHHHHHHHHHHHc-CcccCCccC
Confidence            99999999999999999999999999999999976432 2333344455667888899999999999999 456678999


Q ss_pred             cEEEecCCcc
Q 024338          259 QVLTIDGGMV  268 (269)
Q Consensus       259 ~~i~~dgg~~  268 (269)
                      ++|.+|||+.
T Consensus       278 ~~i~idgg~~  287 (290)
T PRK06701        278 QMLHVNGGVI  287 (290)
T ss_pred             cEEEeCCCcc
Confidence            9999999975

>TIGR02415 23BDH acetoin reductases

Probab=100.00  E-value=1.4e-39  Score=273.35  Aligned_cols=240  Identities=40%  Similarity=0.624  Sum_probs=213.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCcc
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVD  106 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id  106 (269)
                      |+++|||++++||.+++++|+++|++|++ ..|+.+.++++.+++...+.++.++.+|++|+++++++++++.++++++|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id   79 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAV-ADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFD   79 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            68999999999999999999999999887 47888788888888877777889999999999999999999999999999


Q ss_pred             EEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCeEEEEcCCccccCCCCChhhHHhHHHHHH
Q 024338          107 ILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK-KGRIINIASVVGLVGNIGQANYSAAKAGVIG  185 (269)
Q Consensus       107 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~  185 (269)
                      +||||+|.....++.+.+.+++++.+++|+.+++.+++.+++.|.+++ ++++|++||..+..+.++...|+.+|++++.
T Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  159 (254)
T TIGR02415        80 VMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVRG  159 (254)
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCCCcchHHHHHHHHH
Confidence            999999987777888899999999999999999999999999997754 4799999999999999999999999999999


Q ss_pred             HHHHHHHHhccCCeEEEEEecCCccCCcccccCh-----------HHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCC
Q 024338          186 LTKTVAKEYASRNINVNAIAPGFIASDMTAKLGE-----------DLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAG  254 (269)
Q Consensus       186 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~  254 (269)
                      |+++++.++.+.||+|++|+||+++|++......           ...+......+.+++.+|+++++++.||++ +...
T Consensus       160 ~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~-~~~~  238 (254)
T TIGR02415       160 LTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPEDVAGLVSFLAS-EDSD  238 (254)
T ss_pred             HHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHhhCCCCCCCCHHHHHHHHHhhcc-cccC
Confidence            9999999999999999999999999998644321           112334456778888999999999999994 4567


Q ss_pred             CccccEEEecCCcc
Q 024338          255 YITGQVLTIDGGMV  268 (269)
Q Consensus       255 ~~~G~~i~~dgg~~  268 (269)
                      +++|+++.+|||+.
T Consensus       239 ~~~g~~~~~d~g~~  252 (254)
T TIGR02415       239 YITGQSILVDGGMV  252 (254)
T ss_pred             CccCcEEEecCCcc
Confidence            89999999999975

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK12742 oxidoreductase; Provisional

Probab=100.00  E-value=1.3e-39  Score=270.82  Aligned_cols=233  Identities=31%  Similarity=0.516  Sum_probs=197.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      ..+++|++|||||++|||++++++|+++|++|+++..++.+..+++.+++     ...++.+|++|.+++.+++++    
T Consensus         2 ~~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~-----~~~~~~~D~~~~~~~~~~~~~----   72 (237)
T PRK12742          2 GAFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET-----GATAVQTDSADRDAVIDVVRK----   72 (237)
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh-----CCeEEecCCCCHHHHHHHHHH----
Confidence            35779999999999999999999999999998876555666555554433     245688999999988877653    


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccc-cCCCCChhhHHhH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGL-VGNIGQANYSAAK  180 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~-~~~~~~~~Y~~sK  180 (269)
                      ++++|++|||||.....+..+.+.+++++.+++|+.+++.+++.+++.|.  +.+++|++||..+. .+.++...|+++|
T Consensus        73 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~g~iv~isS~~~~~~~~~~~~~Y~~sK  150 (237)
T PRK12742         73 SGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMP--EGGRIIIIGSVNGDRMPVAGMAAYAASK  150 (237)
T ss_pred             hCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHh--cCCeEEEEeccccccCCCCCCcchHHhH
Confidence            57899999999987666667788999999999999999999999999984  45899999999884 5778899999999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccE
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQV  260 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~  260 (269)
                      ++++.++++++.++.+.||+|++|+||+++|++.....+ ..+......+++++.+|+|+++.+.||+ ++.+++++|++
T Consensus       151 aa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~~-~~~~~~~~~~~~~~~~p~~~a~~~~~l~-s~~~~~~~G~~  228 (237)
T PRK12742        151 SALQGMARGLARDFGPRGITINVVQPGPIDTDANPANGP-MKDMMHSFMAIKRHGRPEEVAGMVAWLA-GPEASFVTGAM  228 (237)
T ss_pred             HHHHHHHHHHHHHHhhhCeEEEEEecCcccCCccccccH-HHHHHHhcCCCCCCCCHHHHHHHHHHHc-CcccCcccCCE
Confidence            999999999999999999999999999999998654322 2334445567888899999999999999 56778999999


Q ss_pred             EEecCCc
Q 024338          261 LTIDGGM  267 (269)
Q Consensus       261 i~~dgg~  267 (269)
                      |.+|||+
T Consensus       229 ~~~dgg~  235 (237)
T PRK12742        229 HTIDGAF  235 (237)
T ss_pred             EEeCCCc
Confidence            9999997

>PRK05717 oxidoreductase; Validated

Probab=100.00  E-value=2.6e-39  Score=272.23  Aligned_cols=241  Identities=32%  Similarity=0.520  Sum_probs=206.0

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      ...++||+++||||+++||+++|++|+++|++|+++ +++.+..++..+++   +.++.++.+|+++.++++++++++.+
T Consensus         5 ~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~-~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~   80 (255)
T PRK05717          5 NPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLA-DLDRERGSKVAKAL---GENAWFIAMDVADEAQVAAGVAEVLG   80 (255)
T ss_pred             CcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEE-cCCHHHHHHHHHHc---CCceEEEEccCCCHHHHHHHHHHHHH
Confidence            467889999999999999999999999999998884 67766555554433   45688899999999999999999999


Q ss_pred             hcCCccEEEEccCCCCC--CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHH
Q 024338          101 AWGTVDILINNAGITRD--TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSA  178 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~  178 (269)
                      +++++|++|||||....  .++.+.+.+++++.+++|+.+++.++++++|.|.++ .++||++||..+..+.++...|++
T Consensus        81 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~ii~~sS~~~~~~~~~~~~Y~~  159 (255)
T PRK05717         81 QFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAH-NGAIVNLASTRARQSEPDTEAYAA  159 (255)
T ss_pred             HhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CcEEEEEcchhhcCCCCCCcchHH
Confidence            99999999999998643  467778999999999999999999999999998654 589999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC-hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCcc
Q 024338          179 AKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG-EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYIT  257 (269)
Q Consensus       179 sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~  257 (269)
                      +|++++.++++++.++.+ +|+|++|+||+++|++..... ...........+.+++.+|+|+|+++.+++ ++...+++
T Consensus       160 sKaa~~~~~~~la~~~~~-~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~-~~~~~~~~  237 (255)
T PRK05717        160 SKGGLLALTHALAISLGP-EIRVNAVSPGWIDARDPSQRRAEPLSEADHAQHPAGRVGTVEDVAAMVAWLL-SRQAGFVT  237 (255)
T ss_pred             HHHHHHHHHHHHHHHhcC-CCEEEEEecccCcCCccccccchHHHHHHhhcCCCCCCcCHHHHHHHHHHHc-CchhcCcc
Confidence            999999999999999987 499999999999998743321 222222233567788899999999999999 45667899


Q ss_pred             ccEEEecCCcc
Q 024338          258 GQVLTIDGGMV  268 (269)
Q Consensus       258 G~~i~~dgg~~  268 (269)
                      |+.+.+|||+.
T Consensus       238 g~~~~~~gg~~  248 (255)
T PRK05717        238 GQEFVVDGGMT  248 (255)
T ss_pred             CcEEEECCCce
Confidence            99999999975

>PRK06138 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-39  Score=271.29  Aligned_cols=244  Identities=36%  Similarity=0.620  Sum_probs=213.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      |++++|+++||||+++||.+++++|+++|++|++ ..|+.+..++..+++. .+.++.++++|++|.++++++++++.++
T Consensus         1 m~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~-~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~   78 (252)
T PRK06138          1 MRLAGRVAIVTGAGSGIGRATAKLFAREGARVVV-ADRDAEAAERVAAAIA-AGGRAFARQGDVGSAEAVEALVDFVAAR   78 (252)
T ss_pred             CCCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEE-ecCCHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            5688999999999999999999999999999888 4788777777676665 4567889999999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKA  181 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  181 (269)
                      ++++|+||||+|.....++.+.+.+++++.+++|+.+++.+.+.+++.|++++.++|+++||..+..+.++...|+.+|+
T Consensus        79 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~  158 (252)
T PRK06138         79 WGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVASKG  158 (252)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCCccHHHHHHH
Confidence            99999999999987777778889999999999999999999999999998878899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC-----hH-HHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCC
Q 024338          182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG-----ED-LEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGY  255 (269)
Q Consensus       182 al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~  255 (269)
                      +++.++++++.|+...||++++++||.+.|++.....     ++ .........+.+++.+++|+++++++++.+ ...+
T Consensus       159 a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~-~~~~  237 (252)
T PRK06138        159 AIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHPMNRFGTAEEVAQAALFLASD-ESSF  237 (252)
T ss_pred             HHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCc-hhcC
Confidence            9999999999999999999999999999999754321     11 222222344566678999999999999955 4568


Q ss_pred             ccccEEEecCCcc
Q 024338          256 ITGQVLTIDGGMV  268 (269)
Q Consensus       256 ~~G~~i~~dgg~~  268 (269)
                      ++|+.+.+|||++
T Consensus       238 ~~g~~~~~~~g~~  250 (252)
T PRK06138        238 ATGTTLVVDGGWL  250 (252)
T ss_pred             ccCCEEEECCCee
Confidence            9999999999986

>PRK06139 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.9e-40  Score=285.19  Aligned_cols=229  Identities=28%  Similarity=0.383  Sum_probs=202.1

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      ++++++|++|||||++|||++++++|+++|++|++ ..|+++.++++.+++++.+.++.++.+|++|.++++++++++.+
T Consensus         2 ~~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl-~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~   80 (330)
T PRK06139          2 MGPLHGAVVVITGASSGIGQATAEAFARRGARLVL-AARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAAS   80 (330)
T ss_pred             CcCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence            46788999999999999999999999999999887 58999999999888887778888999999999999999999999


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhH
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                      .++++|++|||||.....++.+.+.+++++.+++|+.+++.+++.++|+|++++.|+||++||..+..+.|+...|++||
T Consensus        81 ~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p~~~~Y~asK  160 (330)
T PRK06139         81 FGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPYAAAYSASK  160 (330)
T ss_pred             hcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCCCchhHHHHH
Confidence            99999999999999877888999999999999999999999999999999888889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccC-CeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCC
Q 024338          181 AGVIGLTKTVAKEYASR-NINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAA  253 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~-gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~  253 (269)
                      +++.+|+++++.|+.+. ||+|+.|+||+++|++..........   ...+.....+|+++|+.+++++.++..
T Consensus       161 aal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~~~~---~~~~~~~~~~pe~vA~~il~~~~~~~~  231 (330)
T PRK06139        161 FGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANYTGR---RLTPPPPVYDPRRVAKAVVRLADRPRA  231 (330)
T ss_pred             HHHHHHHHHHHHHhCCCCCeEEEEEecCCccCcccccccccccc---cccCCCCCCCHHHHHHHHHHHHhCCCC
Confidence            99999999999999875 99999999999999976432211100   111223356899999999999866543

>PRK07814 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-39  Score=272.56  Aligned_cols=243  Identities=35%  Similarity=0.576  Sum_probs=214.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      ++++|++|||||++|||.+++++|+++|++|++ .+|+.+..+++.+.++..+.++.++.+|++++++++++++++.+.+
T Consensus         7 ~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~-~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   85 (263)
T PRK07814          7 RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLI-AARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAF   85 (263)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            478999999999999999999999999999888 4788888888887777666788899999999999999999999999


Q ss_pred             CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-CCCCeEEEEcCCccccCCCCChhhHHhHH
Q 024338          103 GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMK-KKKGRIINIASVVGLVGNIGQANYSAAKA  181 (269)
Q Consensus       103 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  181 (269)
                      +++|+||||||.....++.+.+.+++++.+++|+.+++.+.+++.|.|.+ ++.+++|++||..+..+.++...|+++|+
T Consensus        86 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK~  165 (263)
T PRK07814         86 GRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGTAKA  165 (263)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCCCCchhHHHHH
Confidence            99999999999876667778899999999999999999999999999976 56789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc--ChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCcccc
Q 024338          182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL--GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQ  259 (269)
Q Consensus       182 al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~  259 (269)
                      +++.++++++.|+.+ +|++++|+||++.|++....  .+..........+..+..+|+|+|++++|++ ++...+++|+
T Consensus       166 a~~~~~~~~~~e~~~-~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~-~~~~~~~~g~  243 (263)
T PRK07814        166 ALAHYTRLAALDLCP-RIRVNAIAPGSILTSALEVVAANDELRAPMEKATPLRRLGDPEDIAAAAVYLA-SPAGSYLTGK  243 (263)
T ss_pred             HHHHHHHHHHHHHCC-CceEEEEEeCCCcCchhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHc-CccccCcCCC
Confidence            999999999999987 69999999999999976532  2333444445567777889999999999999 5566789999


Q ss_pred             EEEecCCcc
Q 024338          260 VLTIDGGMV  268 (269)
Q Consensus       260 ~i~~dgg~~  268 (269)
                      .+.+|+|+.
T Consensus       244 ~~~~~~~~~  252 (263)
T PRK07814        244 TLEVDGGLT  252 (263)
T ss_pred             EEEECCCcc
Confidence            999999964

>PRK06500 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-39  Score=270.79  Aligned_cols=239  Identities=28%  Similarity=0.488  Sum_probs=207.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      .+++|+++||||+++||++++++|+++|++|++ .+|+.+..++..+++   +.++.++++|++|.+++.++++++.+.+
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~-~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (249)
T PRK06500          3 RLQGKTALITGGTSGIGLETARQFLAEGARVAI-TGRDPASLEAARAEL---GESALVIRADAGDVAAQKALAQALAEAF   78 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEE-ecCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            567899999999999999999999999999887 477776665555444   5678889999999999999999999999


Q ss_pred             CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHH
Q 024338          103 GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAG  182 (269)
Q Consensus       103 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  182 (269)
                      +++|++|||||.....++.+.+.+++++.+++|+.+++.++++++|+|.  ..+++|+++|..+..+.++...|+.+|++
T Consensus        79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~~~i~~~S~~~~~~~~~~~~Y~~sK~a  156 (249)
T PRK06500         79 GRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLA--NPASIVLNGSINAHIGMPNSSVYAASKAA  156 (249)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHh--cCCEEEEEechHhccCCCCccHHHHHHHH
Confidence            9999999999987767777889999999999999999999999999984  34789999999999999999999999999


Q ss_pred             HHHHHHHHHHHhccCCeEEEEEecCCccCCccccc------ChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCc
Q 024338          183 VIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL------GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYI  256 (269)
Q Consensus       183 l~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~  256 (269)
                      ++.++++++.|+.+.||+++.++||+++|++....      .+..........|+++..+|+|+|+++.+|++ +...++
T Consensus       157 ~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~-~~~~~~  235 (249)
T PRK06500        157 LLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLGRFGTPEEIAKAVLYLAS-DESAFI  235 (249)
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcC-ccccCc
Confidence            99999999999999999999999999999975431      12233344456677888899999999999994 556799


Q ss_pred             cccEEEecCCcc
Q 024338          257 TGQVLTIDGGMV  268 (269)
Q Consensus       257 ~G~~i~~dgg~~  268 (269)
                      +|+.|.+|||..
T Consensus       236 ~g~~i~~~gg~~  247 (249)
T PRK06500        236 VGSEIIVDGGMS  247 (249)
T ss_pred             cCCeEEECCCcc
Confidence            999999999964

>PRK08278 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-39  Score=277.08  Aligned_cols=238  Identities=29%  Similarity=0.401  Sum_probs=204.7

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHH-------HHHHHHHHHHHcCCcEEEEEccCCCHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSK-------EAEEVCKEIEASGGQALTFGGDVSKEADVES   93 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~-------~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~   93 (269)
                      +|++++|+++||||++|||.++++.|+++|++|+++ .|+.+       .++++.++++..+.++.++.+|+++.+++++
T Consensus         1 ~~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~   79 (273)
T PRK08278          1 MMSLSGKTLFITGASRGIGLAIALRAARDGANIVIA-AKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAA   79 (273)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEE-ecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHH
Confidence            356789999999999999999999999999999885 55543       2445556666667788899999999999999


Q ss_pred             HHHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCC--C
Q 024338           94 MIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGN--I  171 (269)
Q Consensus        94 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~--~  171 (269)
                      +++++.+.++++|++|||||.....++.+.+.+++++.+++|+.+++.++++++|.|.+++.++|+++||..+..+.  +
T Consensus        80 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~  159 (273)
T PRK08278         80 AVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPKWFA  159 (273)
T ss_pred             HHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccccccC
Confidence            99999999999999999999877777888899999999999999999999999999988878999999999888776  8


Q ss_pred             CChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecC-CccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccC
Q 024338          172 GQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG-FIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALN  250 (269)
Q Consensus       172 ~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~  250 (269)
                      +...|++||++++.++++++.|+.++||+|++|+|| +++|+..+....       ...+.++..+|+++|+.++++++ 
T Consensus       160 ~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~~~~-------~~~~~~~~~~p~~va~~~~~l~~-  231 (273)
T PRK08278        160 PHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRNLLG-------GDEAMRRSRTPEIMADAAYEILS-  231 (273)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHhccc-------ccccccccCCHHHHHHHHHHHhc-
Confidence            889999999999999999999999999999999999 688886443321       11234556799999999999984 


Q ss_pred             CCCCCccccEEEecCCcc
Q 024338          251 PAAGYITGQVLTIDGGMV  268 (269)
Q Consensus       251 ~~~~~~~G~~i~~dgg~~  268 (269)
                      +...+++|+.+ +|++++
T Consensus       232 ~~~~~~~G~~~-~~~~~~  248 (273)
T PRK08278        232 RPAREFTGNFL-IDEEVL  248 (273)
T ss_pred             CccccceeEEE-eccchh
Confidence            45668999988 588764

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=100.00  E-value=2.1e-39  Score=274.57  Aligned_cols=240  Identities=32%  Similarity=0.501  Sum_probs=196.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHc-CCcEEEEEccCCCHHHH----HHHHHHHHHh
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS-GGQALTFGGDVSKEADV----ESMIKTAVDA  101 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dls~~~~~----~~~~~~~~~~  101 (269)
                      ++++||||++|||++++++|+++|++|+++.+++++.++++.+++... +.+..++.+|++|.+++    +++++++.+.
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~   81 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA   81 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence            689999999999999999999999999886566677777777777543 45677799999999855    5666777778


Q ss_pred             cCCccEEEEccCCCCCCcccCCCH-----------HHHHHHHHHHhHHHHHHHHHHHHHHHhC------CCCeEEEEcCC
Q 024338          102 WGTVDILINNAGITRDTLLMRMKK-----------SQWQDVIDLNLTGVFLCTQAAAKIMMKK------KKGRIINIASV  164 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~~~~iv~isS~  164 (269)
                      ++++|+||||||.....++.+.+.           +++.+.+++|+.+++.++++++|.|..+      ..+++++++|.
T Consensus        82 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~  161 (267)
T TIGR02685        82 FGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDA  161 (267)
T ss_pred             cCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhh
Confidence            899999999999765444433333           3589999999999999999999998543      24689999999


Q ss_pred             ccccCCCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCC-CCCCHHHHHHH
Q 024338          165 VGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLG-RYGQPEEVAGL  243 (269)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~a~~  243 (269)
                      .+..+.+++..|++||+++++|+++++.|+.+.||+|++|+||+++|+..  ......+......+++ +..+|+++++.
T Consensus       162 ~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~va~~  239 (267)
T TIGR02685       162 MTDQPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDA--MPFEVQEDYRRKVPLGQREASAEQIADV  239 (267)
T ss_pred             hccCCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccc--cchhHHHHHHHhCCCCcCCCCHHHHHHH
Confidence            99999999999999999999999999999999999999999999987732  2222233333445554 56799999999


Q ss_pred             HHHhccCCCCCCccccEEEecCCccC
Q 024338          244 VEFLALNPAAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       244 ~~~l~~~~~~~~~~G~~i~~dgg~~~  269 (269)
                      ++||+ ++.+.+++|+.+.+|||+.+
T Consensus       240 ~~~l~-~~~~~~~~G~~~~v~gg~~~  264 (267)
T TIGR02685       240 VIFLV-SPKAKYITGTCIKVDGGLSL  264 (267)
T ss_pred             HHHHh-CcccCCcccceEEECCceec
Confidence            99999 56678999999999999864

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=7.9e-40  Score=269.64  Aligned_cols=221  Identities=29%  Similarity=0.458  Sum_probs=198.7

Q ss_pred             ccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHH
Q 024338           20 AAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAV   99 (269)
Q Consensus        20 ~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~   99 (269)
                      ..++.+|++||||||++|||+++|.+|+++|+.+++ .+.+.+..++..++++..+ +++.+.||++|.+++.+..++++
T Consensus        32 ~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl-~Din~~~~~etv~~~~~~g-~~~~y~cdis~~eei~~~a~~Vk  109 (300)
T KOG1201|consen   32 PLKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVL-WDINKQGNEETVKEIRKIG-EAKAYTCDISDREEIYRLAKKVK  109 (300)
T ss_pred             chhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEE-EeccccchHHHHHHHHhcC-ceeEEEecCCCHHHHHHHHHHHH
Confidence            557889999999999999999999999999997766 5888888888888888764 89999999999999999999999


Q ss_pred             HhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHh
Q 024338          100 DAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAA  179 (269)
Q Consensus       100 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  179 (269)
                      +..|++|+||||||+....++.+.+.+++++++++|+.+.+..+++++|.|.++.+|+||+|+|++|..+.++...||+|
T Consensus       110 ~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~gl~~YcaS  189 (300)
T KOG1201|consen  110 KEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAGLADYCAS  189 (300)
T ss_pred             HhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCccchhhhhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhc---cCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccC
Q 024338          180 KAGVIGLTKTVAKEYA---SRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALN  250 (269)
Q Consensus       180 K~al~~~~~~la~e~~---~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~  250 (269)
                      |+|+.+|.++|..|+.   .+||+...|+|++++|.+.....+        ...+....+|+++|+.++.-...
T Consensus       190 K~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~~~~--------~~~l~P~L~p~~va~~Iv~ai~~  255 (300)
T KOG1201|consen  190 KFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDGATP--------FPTLAPLLEPEYVAKRIVEAILT  255 (300)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCCCCC--------CccccCCCCHHHHHHHHHHHHHc
Confidence            9999999999999975   447999999999999998775111        11223345799999998887644

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=7.2e-39  Score=268.24  Aligned_cols=241  Identities=37%  Similarity=0.602  Sum_probs=207.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTV  105 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i  105 (269)
                      .|++|||||++|||.++++.|+++|++|+++..|+++.++++.++++..+.++..++||++|.++++++++++.+.++++
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRL   81 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence            37899999999999999999999999988766778777877877777666788999999999999999999999999999


Q ss_pred             cEEEEccCCCCC-CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC---CCeEEEEcCCccccCCCC-ChhhHHhH
Q 024338          106 DILINNAGITRD-TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK---KGRIINIASVVGLVGNIG-QANYSAAK  180 (269)
Q Consensus       106 d~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~~~iv~isS~~~~~~~~~-~~~Y~~sK  180 (269)
                      |++|||||.... .++.+.+.++++..+++|+.+++.+++.+++.+..++   .+++|++||..+..+.+. ...|++||
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~~Y~~sK  161 (248)
T PRK06947         82 DALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAGSK  161 (248)
T ss_pred             CEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCCCCcccHhhH
Confidence            999999997644 4577888999999999999999999999999886543   578999999998887764 57899999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc-ChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCcccc
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL-GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQ  259 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~  259 (269)
                      +++++|+++++.++.+.||+|+.++||+++|++.... .+..........|.++..+|+++++.++++++ +...+++|+
T Consensus       162 ~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~e~va~~~~~l~~-~~~~~~~G~  240 (248)
T PRK06947        162 GAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQPGRAARLGAQTPLGRAGEADEVAETIVWLLS-DAASYVTGA  240 (248)
T ss_pred             HHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCCHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcC-ccccCcCCc
Confidence            9999999999999999999999999999999975432 22222333445677778899999999999984 566799999


Q ss_pred             EEEecCCc
Q 024338          260 VLTIDGGM  267 (269)
Q Consensus       260 ~i~~dgg~  267 (269)
                      +|.+|||.
T Consensus       241 ~~~~~gg~  248 (248)
T PRK06947        241 LLDVGGGR  248 (248)
T ss_pred             eEeeCCCC
Confidence            99999983

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=100.00  E-value=1.4e-38  Score=265.91  Aligned_cols=247  Identities=60%  Similarity=0.912  Sum_probs=219.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      +++++|++||||++++||.++++.|+++|++|+++.+++.+..+++.++++..+.++.++.+|+++.+++.++++++.+.
T Consensus         1 ~~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (248)
T PRK05557          1 MSLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAE   80 (248)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            45678999999999999999999999999999776555555566777777666778889999999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKA  181 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  181 (269)
                      ++++|++||++|.....+..+.+.+.+++.+++|+.+++.+++.+.+.+.+++.+++|++||..+..+.++...|+.+|+
T Consensus        81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~~~~y~~sk~  160 (248)
T PRK05557         81 FGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPGQANYAASKA  160 (248)
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCCCchhHHHHH
Confidence            99999999999987777777788999999999999999999999999998777789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEE
Q 024338          182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL  261 (269)
Q Consensus       182 al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i  261 (269)
                      +++.++++++.++...|++++.++||+++|++.+...+..........+.+.+.+++++++++.+|+. +...+++|+.|
T Consensus       161 a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~-~~~~~~~g~~~  239 (248)
T PRK05557        161 GVIGFTKSLARELASRGITVNAVAPGFIETDMTDALPEDVKEAILAQIPLGRLGQPEEIASAVAFLAS-DEAAYITGQTL  239 (248)
T ss_pred             HHHHHHHHHHHHhhhhCeEEEEEecCccCCccccccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcC-cccCCccccEE
Confidence            99999999999999899999999999999998776655555555566677778899999999999984 45668999999


Q ss_pred             EecCCccC
Q 024338          262 TIDGGMVM  269 (269)
Q Consensus       262 ~~dgg~~~  269 (269)
                      .+|||++|
T Consensus       240 ~i~~~~~~  247 (248)
T PRK05557        240 HVNGGMVM  247 (248)
T ss_pred             EecCCccC
Confidence            99999986

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=5.9e-39  Score=270.70  Aligned_cols=246  Identities=33%  Similarity=0.508  Sum_probs=213.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      .++++|++|||||+++||.++++.|+++|++|++ ..|+++..++..+++++.+.++.++++|++|.++++++++++.+.
T Consensus         3 ~~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   81 (262)
T PRK13394          3 SNLNGKTAVVTGAASGIGKEIALELARAGAAVAI-ADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAER   81 (262)
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEE-EeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHH
Confidence            4577999999999999999999999999999887 588888888888888777778888999999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHH-HhCCCCeEEEEcCCccccCCCCChhhHHhH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIM-MKKKKGRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l-~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                      ++++|+||||||.....++.+.+.+++++.+++|+.+++.+++.+++.| .+.+.++||++||..+..+.+....|+++|
T Consensus        82 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~~~~~~y~~sk  161 (262)
T PRK13394         82 FGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAK  161 (262)
T ss_pred             cCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCCCCCcccHHHH
Confidence            9999999999998777777788899999999999999999999999999 666778999999999998888999999999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChH-----------HHHH-HHhcCCCCCCCCHHHHHHHHHHhc
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGED-----------LEKK-ILEKIPLGRYGQPEEVAGLVEFLA  248 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~-----------~~~~-~~~~~~~~~~~~~~~~a~~~~~l~  248 (269)
                      ++++.+++.++.++.+.||++++++||+++|++.....+.           .... +..+.+.+.+.+++|+++++++++
T Consensus       162 ~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~l~  241 (262)
T PRK13394        162 HGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQTVLFLS  241 (262)
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHc
Confidence            9999999999999998999999999999999975332111           1111 122445677889999999999999


Q ss_pred             cCCCCCCccccEEEecCCccC
Q 024338          249 LNPAAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       249 ~~~~~~~~~G~~i~~dgg~~~  269 (269)
                      +. ....++|++|.+|+|+.+
T Consensus       242 ~~-~~~~~~g~~~~~~~g~~~  261 (262)
T PRK13394        242 SF-PSAALTGQSFVVSHGWFM  261 (262)
T ss_pred             Cc-cccCCcCCEEeeCCceec
Confidence            54 345789999999999753

>PRK12744 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-39  Score=272.03  Aligned_cols=245  Identities=23%  Similarity=0.414  Sum_probs=199.8

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecC---CHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYAR---SSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKT   97 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r---~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~   97 (269)
                      ++++++|++|||||++|||.++|+.|+++|++++++..+   +.+..++..++++..+.++.++++|++|++++++++++
T Consensus         3 ~~~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~   82 (257)
T PRK12744          3 DHSLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDD   82 (257)
T ss_pred             CCCCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHH
Confidence            356789999999999999999999999999997765443   23455666667766666888999999999999999999


Q ss_pred             HHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhH
Q 024338           98 AVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYS  177 (269)
Q Consensus        98 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~  177 (269)
                      +.+.++++|++|||||.....++.+.+.+++++.+++|+.+++.++++++|.|.+  .+++++++|.....+.+++..|+
T Consensus        83 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~~~iv~~~ss~~~~~~~~~~~Y~  160 (257)
T PRK12744         83 AKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLND--NGKIVTLVTSLLGAFTPFYSAYA  160 (257)
T ss_pred             HHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhcc--CCCEEEEecchhcccCCCcccch
Confidence            9999999999999999877677888899999999999999999999999999843  46777764433334567889999


Q ss_pred             HhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC-hHHH---HHHHhcCCCC--CCCCHHHHHHHHHHhccCC
Q 024338          178 AAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG-EDLE---KKILEKIPLG--RYGQPEEVAGLVEFLALNP  251 (269)
Q Consensus       178 ~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~-~~~~---~~~~~~~~~~--~~~~~~~~a~~~~~l~~~~  251 (269)
                      +||+|++.|+++++.|+.++||+|+.++||++.|++..+.. +...   +......++.  ++.+|+|+|+.+.||++ +
T Consensus       161 ~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~-~  239 (257)
T PRK12744        161 GSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAVAYHKTAAALSPFSKTGLTDIEDIVPFIRFLVT-D  239 (257)
T ss_pred             hhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccchhhcccccccccccccCCCCCHHHHHHHHHHhhc-c
Confidence            99999999999999999999999999999999999754321 1111   1111122332  67789999999999995 3


Q ss_pred             CCCCccccEEEecCCccC
Q 024338          252 AAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       252 ~~~~~~G~~i~~dgg~~~  269 (269)
                       ..+++|+++.+|||+.+
T Consensus       240 -~~~~~g~~~~~~gg~~~  256 (257)
T PRK12744        240 -GWWITGQTILINGGYTT  256 (257)
T ss_pred             -cceeecceEeecCCccC
Confidence             56899999999999864

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.6e-38  Score=265.60  Aligned_cols=246  Identities=46%  Similarity=0.742  Sum_probs=218.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      |++.+|++|||||+++||.++++.|+++|++++++..|+.+..+++.+.+...+.++.++.+|++|.++++++++++.+.
T Consensus         1 ~~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (247)
T PRK05565          1 MKLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEK   80 (247)
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            46788999999999999999999999999998885478888777777777666667889999999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKA  181 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  181 (269)
                      ++++|++||++|.....++.+.+.+++++.+++|+.+++.+++.++|.+.+++.+++|++||..+..+.+....|+.+|+
T Consensus        81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~sK~  160 (247)
T PRK05565         81 FGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYSASKG  160 (247)
T ss_pred             hCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCCccHHHHHHH
Confidence            99999999999987666777889999999999999999999999999998877899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEE
Q 024338          182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL  261 (269)
Q Consensus       182 al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i  261 (269)
                      +++.++++++.++.+.|+++++++||+++|++.+...+..........+.+++.+++++++.++++++. ....++|+++
T Consensus       161 a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~-~~~~~~g~~~  239 (247)
T PRK05565        161 AVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSEEDKEGLAEEIPLGRLGKPEEIAKVVLFLASD-DASYITGQII  239 (247)
T ss_pred             HHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCC-ccCCccCcEE
Confidence            999999999999999999999999999999987766554444333445666778999999999999954 5668999999


Q ss_pred             EecCCcc
Q 024338          262 TIDGGMV  268 (269)
Q Consensus       262 ~~dgg~~  268 (269)
                      .+|+|++
T Consensus       240 ~~~~~~~  246 (247)
T PRK05565        240 TVDGGWT  246 (247)
T ss_pred             EecCCcc
Confidence            9999975

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-38  Score=268.13  Aligned_cols=244  Identities=41%  Similarity=0.626  Sum_probs=214.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      +++|++|||||+++||.+++++|+++|++|++ ..|+++..+++.++++..+.++..+.+|++|.++++++++++.+.++
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   80 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVI-ADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFG   80 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEE-EeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            56899999999999999999999999999888 47888888888888877777899999999999999999999999999


Q ss_pred             CccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHH
Q 024338          104 TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGV  183 (269)
Q Consensus       104 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al  183 (269)
                      ++|+||||||......+.+.+.+++++.+++|+.+++.+++.+++.|++++.+++|++||..+..+.++...|+++|+++
T Consensus        81 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~~k~a~  160 (258)
T PRK12429         81 GVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSAGKAAYVSAKHGL  160 (258)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCcchhHHHHHHH
Confidence            99999999998777777888999999999999999999999999999888889999999999999999999999999999


Q ss_pred             HHHHHHHHHHhccCCeEEEEEecCCccCCcccccChH-----------H-HHHHHhcCCCCCCCCHHHHHHHHHHhccCC
Q 024338          184 IGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGED-----------L-EKKILEKIPLGRYGQPEEVAGLVEFLALNP  251 (269)
Q Consensus       184 ~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~-----------~-~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~  251 (269)
                      +.+++.++.++.+.||++++++||+++||+.......           . ........+.+.+.+++|+|+++++|+.+ 
T Consensus       161 ~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~-  239 (258)
T PRK12429        161 IGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEEIADYALFLASF-  239 (258)
T ss_pred             HHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhccCCccccCCHHHHHHHHHHHcCc-
Confidence            9999999999999999999999999999875422111           1 11222334556788999999999999854 


Q ss_pred             CCCCccccEEEecCCccC
Q 024338          252 AAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       252 ~~~~~~G~~i~~dgg~~~  269 (269)
                      ....++|+++.+|||+++
T Consensus       240 ~~~~~~g~~~~~~~g~~~  257 (258)
T PRK12429        240 AAKGVTGQAWVVDGGWTA  257 (258)
T ss_pred             cccCccCCeEEeCCCEec
Confidence            455789999999999874

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.4e-41  Score=257.05  Aligned_cols=237  Identities=29%  Similarity=0.454  Sum_probs=209.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      ++.|+++++||+..|||+++++.|++.|+.|+. +.|+++.+..+.++.   ..-+.++..|+++++...+++..    .
T Consensus         4 ~laG~~vlvTgagaGIG~~~v~~La~aGA~ViA-vaR~~a~L~sLV~e~---p~~I~Pi~~Dls~wea~~~~l~~----v   75 (245)
T KOG1207|consen    4 SLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIA-VARNEANLLSLVKET---PSLIIPIVGDLSAWEALFKLLVP----V   75 (245)
T ss_pred             cccceEEEeecccccccHHHHHHHHhcCCEEEE-EecCHHHHHHHHhhC---CcceeeeEecccHHHHHHHhhcc----c
Confidence            568999999999999999999999999999999 589998887777665   34588899999997776665553    3


Q ss_pred             CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHH-HhCCCCeEEEEcCCccccCCCCChhhHHhHH
Q 024338          103 GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIM-MKKKKGRIINIASVVGLVGNIGQANYSAAKA  181 (269)
Q Consensus       103 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l-~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  181 (269)
                      +++|.++||||+....++.+.+.+.+++.|++|+.+.+.++|.+..-+ .++.+|.||++||.++.++..+...||++|+
T Consensus        76 ~pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~nHtvYcatKa  155 (245)
T KOG1207|consen   76 FPIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDNHTVYCATKA  155 (245)
T ss_pred             CchhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccCCceEEeecHH
Confidence            689999999999888999999999999999999999999999877644 3456789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc--ChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCcccc
Q 024338          182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL--GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQ  259 (269)
Q Consensus       182 al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~  259 (269)
                      |++++++++|.|+.+++||||+|.|-.+.|.|.+..  ++.-......++|++++..++++.++++||+ ++.+++.||.
T Consensus       156 ALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~riPl~rFaEV~eVVnA~lfLL-Sd~ssmttGs  234 (245)
T KOG1207|consen  156 ALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDRIPLKRFAEVDEVVNAVLFLL-SDNSSMTTGS  234 (245)
T ss_pred             HHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchhccchhhhCchhhhhHHHHHHhhheeee-ecCcCcccCc
Confidence            999999999999999999999999999999987542  2334456677899999999999999999999 5678899999


Q ss_pred             EEEecCCcc
Q 024338          260 VLTIDGGMV  268 (269)
Q Consensus       260 ~i~~dgg~~  268 (269)
                      ++.+||||+
T Consensus       235 tlpveGGfs  243 (245)
T KOG1207|consen  235 TLPVEGGFS  243 (245)
T ss_pred             eeeecCCcc
Confidence            999999986

>PRK12746 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-38  Score=266.84  Aligned_cols=245  Identities=33%  Similarity=0.579  Sum_probs=212.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      +++++|+++||||+++||.++|++|+++|+.|+++..|+.+..++..+.+...+.++.++.+|++|.+++.++++++.+.
T Consensus         2 ~~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~   81 (254)
T PRK12746          2 KNLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNE   81 (254)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHH
Confidence            45778999999999999999999999999998876678887777777777665667889999999999999999999988


Q ss_pred             c------CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChh
Q 024338          102 W------GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQAN  175 (269)
Q Consensus       102 ~------~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~  175 (269)
                      +      +++|++|||||......+.+.+.+.++..+++|+.+++.+++.+++.|.+  .+++|++||..+..+.++...
T Consensus        82 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~v~~sS~~~~~~~~~~~~  159 (254)
T PRK12746         82 LQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRA--EGRVINISSAEVRLGFTGSIA  159 (254)
T ss_pred             hccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc--CCEEEEECCHHhcCCCCCCcc
Confidence            7      47999999999877777788899999999999999999999999999843  479999999999999999999


Q ss_pred             hHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC--hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCC
Q 024338          176 YSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG--EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAA  253 (269)
Q Consensus       176 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~  253 (269)
                      |++||++++.++++++.++.+.|++++.++||+++|++.....  +..........+.++..+++|+++++.++++ +..
T Consensus       160 Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~-~~~  238 (254)
T PRK12746        160 YGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNSSVFGRIGQVEDIADAVAFLAS-SDS  238 (254)
T ss_pred             hHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccChhHHHHHHhcCCcCCCCCHHHHHHHHHHHcC-ccc
Confidence            9999999999999999999999999999999999999865432  2222333344566778899999999999985 455


Q ss_pred             CCccccEEEecCCccC
Q 024338          254 GYITGQVLTIDGGMVM  269 (269)
Q Consensus       254 ~~~~G~~i~~dgg~~~  269 (269)
                      .+++|+.+.+++|+++
T Consensus       239 ~~~~g~~~~i~~~~~~  254 (254)
T PRK12746        239 RWVTGQIIDVSGGFCL  254 (254)
T ss_pred             CCcCCCEEEeCCCccC
Confidence            6899999999999865

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.5e-38  Score=265.34  Aligned_cols=243  Identities=44%  Similarity=0.701  Sum_probs=212.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      |+++++++||||++++||.++++.|+++|++|++ +.|+.+.+++..+++...+.++.++.+|+++.++++++++++.+.
T Consensus         1 ~~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~-~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (253)
T PRK08217          1 MDLKDKVIVITGGAQGLGRAMAEYLAQKGAKLAL-IDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAED   79 (253)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999877 578888788788877766778889999999999999999999998


Q ss_pred             cCCccEEEEccCCCCCCc--------c-cCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCCeEEEEcCCccccCCC
Q 024338          102 WGTVDILINNAGITRDTL--------L-MRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKK-KKGRIINIASVVGLVGNI  171 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~--------~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~iv~isS~~~~~~~~  171 (269)
                      ++++|++|||+|......        + .+.+.+.++..+++|+.+++.+.+.+.|.|.++ ..++++++||. +..+.+
T Consensus        80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~-~~~~~~  158 (253)
T PRK08217         80 FGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSI-ARAGNM  158 (253)
T ss_pred             cCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccc-cccCCC
Confidence            899999999999754322        1 567889999999999999999999999999765 45789999886 456778


Q ss_pred             CChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCC
Q 024338          172 GQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNP  251 (269)
Q Consensus       172 ~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~  251 (269)
                      +...|+++|++++.++++++.++.+.||++++++||+++|++.....+...+......+.+++.+|+|+++.+.+|+++ 
T Consensus       159 ~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~-  237 (253)
T PRK08217        159 GQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMKPEALERLEKMIPVGRLGEPEEIAHTVRFIIEN-  237 (253)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCHHHHHHHHhcCCcCCCcCHHHHHHHHHHHHcC-
Confidence            8999999999999999999999998999999999999999988766666666666677888889999999999999943 


Q ss_pred             CCCCccccEEEecCCccC
Q 024338          252 AAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       252 ~~~~~~G~~i~~dgg~~~  269 (269)
                        .+++|++|.+|||+++
T Consensus       238 --~~~~g~~~~~~gg~~~  253 (253)
T PRK08217        238 --DYVTGRVLEIDGGLRL  253 (253)
T ss_pred             --CCcCCcEEEeCCCccC
Confidence              4789999999999875

>PRK08862 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.7e-39  Score=264.70  Aligned_cols=222  Identities=18%  Similarity=0.304  Sum_probs=192.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      |++++|+++||||++|||++++++|+++|++|++ .+|+++.++++.+++++.+.++..+.+|++|.++++++++++.++
T Consensus         1 ~~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~-~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (227)
T PRK08862          1 MDIKSSIILITSAGSVLGRTISCHFARLGATLIL-CDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQ   79 (227)
T ss_pred             CCCCCeEEEEECCccHHHHHHHHHHHHCCCEEEE-EcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999888 588998888888888776777888999999999999999999999


Q ss_pred             cC-CccEEEEccCCC-CCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCeEEEEcCCccccCCCCChhhHH
Q 024338          102 WG-TVDILINNAGIT-RDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK-KGRIINIASVVGLVGNIGQANYSA  178 (269)
Q Consensus       102 ~~-~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~~~Y~~  178 (269)
                      ++ ++|++|||||.. ...++.+.+.+++.+.+++|+.+++.+.+.++|+|.+++ +|+||++||..+.   +++..|++
T Consensus        80 ~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~---~~~~~Y~a  156 (227)
T PRK08862         80 FNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH---QDLTGVES  156 (227)
T ss_pred             hCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC---CCcchhHH
Confidence            99 999999999854 345788899999999999999999999999999997654 7899999997543   56789999


Q ss_pred             hHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccc
Q 024338          179 AKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITG  258 (269)
Q Consensus       179 sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G  258 (269)
                      +|+++.+|+++++.|+++.||+||+|+||+++|+.  ...++..+..           .++++.+..||++   ..++||
T Consensus       157 sKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~--~~~~~~~~~~-----------~~~~~~~~~~l~~---~~~~tg  220 (227)
T PRK08862        157 SNALVSGFTHSWAKELTPFNIRVGGVVPSIFSANG--ELDAVHWAEI-----------QDELIRNTEYIVA---NEYFSG  220 (227)
T ss_pred             HHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCC--ccCHHHHHHH-----------HHHHHhheeEEEe---cccccc
Confidence            99999999999999999999999999999999993  2112211111           2899999999995   459999


Q ss_pred             cEEEe
Q 024338          259 QVLTI  263 (269)
Q Consensus       259 ~~i~~  263 (269)
                      +.|..
T Consensus       221 ~~~~~  225 (227)
T PRK08862        221 RVVEA  225 (227)
T ss_pred             eEEee
Confidence            98864

>PRK07069 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.9e-38  Score=266.00  Aligned_cols=238  Identities=32%  Similarity=0.568  Sum_probs=207.2

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCcEEEEecCC-HHHHHHHHHHHHHcC--CcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Q 024338           29 AVVTGASRGIGRAVATSLGKAGCKVLVNYARS-SKEAEEVCKEIEASG--GQALTFGGDVSKEADVESMIKTAVDAWGTV  105 (269)
Q Consensus        29 vlItGas~giG~~~a~~l~~~G~~v~i~~~r~-~~~~~~~~~~l~~~~--~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i  105 (269)
                      ++||||+++||+++++.|+++|++|+++ .|+ .+.++++.+++....  ..+..+++|++|.++++++++++.+.++++
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   80 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLT-DINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL   80 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEE-eCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            7999999999999999999999999885 565 666777776665432  235568899999999999999999999999


Q ss_pred             cEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHHHH
Q 024338          106 DILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIG  185 (269)
Q Consensus       106 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~  185 (269)
                      |++|||||.....++.+.+.+++++.+++|+.+++.+++.++|.|++++.++||++||..+..+.++...|+++|++++.
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~Y~~sK~a~~~  160 (251)
T PRK07069         81 SVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAAVAS  160 (251)
T ss_pred             cEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCCCchhHHHHHHHHH
Confidence            99999999887777888899999999999999999999999999988778999999999999999999999999999999


Q ss_pred             HHHHHHHHhccCC--eEEEEEecCCccCCcccccC-----hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccc
Q 024338          186 LTKTVAKEYASRN--INVNAIAPGFIASDMTAKLG-----EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITG  258 (269)
Q Consensus       186 ~~~~la~e~~~~g--i~v~~v~pG~v~t~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G  258 (269)
                      |+++++.|+.+.+  |+++.|+||+++|++.....     +..........+.+++.+|+|+++.+++|+ ++...+++|
T Consensus       161 ~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~-~~~~~~~~g  239 (251)
T PRK07069        161 LTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVPLGRLGEPDDVAHAVLYLA-SDESRFVTG  239 (251)
T ss_pred             HHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCCCCCCcCHHHHHHHHHHHc-CccccCccC
Confidence            9999999997765  99999999999999865321     223334445677788889999999999998 556779999


Q ss_pred             cEEEecCCcc
Q 024338          259 QVLTIDGGMV  268 (269)
Q Consensus       259 ~~i~~dgg~~  268 (269)
                      +.+.+|||+.
T Consensus       240 ~~i~~~~g~~  249 (251)
T PRK07069        240 AELVIDGGIC  249 (251)
T ss_pred             CEEEECCCee
Confidence            9999999974

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=6.4e-39  Score=266.45  Aligned_cols=231  Identities=36%  Similarity=0.537  Sum_probs=197.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      |++.+|+++||||+++||.++++.|+++|++|+++ .|+....         ...++.++.+|++++      ++++.+.
T Consensus         1 ~~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~-~r~~~~~---------~~~~~~~~~~D~~~~------~~~~~~~   64 (235)
T PRK06550          1 QEFMTKTVLITGAASGIGLAQARAFLAQGAQVYGV-DKQDKPD---------LSGNFHFLQLDLSDD------LEPLFDW   64 (235)
T ss_pred             CCCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEE-eCCcccc---------cCCcEEEEECChHHH------HHHHHHh
Confidence            46789999999999999999999999999998885 5554221         134678899999987      5555566


Q ss_pred             cCCccEEEEccCCCCC-CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhH
Q 024338          102 WGTVDILINNAGITRD-TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       102 ~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                      ++++|++|||||.... .++.+.+.+++++.+++|+.+++.++++++|.|.+++.++||++||..+..+.++...|+.+|
T Consensus        65 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  144 (235)
T PRK06550         65 VPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGGGAAYTASK  144 (235)
T ss_pred             hCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcccHHHH
Confidence            7899999999997543 567788999999999999999999999999999887889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc-C-hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccc
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL-G-EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITG  258 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G  258 (269)
                      ++++.++++++.|+.+.||++++|+||+++|++.... . ...........|++++.+|+|+|++++||+ ++.+.+++|
T Consensus       145 ~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~-s~~~~~~~g  223 (235)
T PRK06550        145 HALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEPGGLADWVARETPIKRWAEPEEVAELTLFLA-SGKADYMQG  223 (235)
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCchHHHHHHhccCCcCCCCCHHHHHHHHHHHc-ChhhccCCC
Confidence            9999999999999999999999999999999976432 2 223334455678888999999999999999 556679999


Q ss_pred             cEEEecCCccC
Q 024338          259 QVLTIDGGMVM  269 (269)
Q Consensus       259 ~~i~~dgg~~~  269 (269)
                      +++.+|||+++
T Consensus       224 ~~~~~~gg~~~  234 (235)
T PRK06550        224 TIVPIDGGWTL  234 (235)
T ss_pred             cEEEECCceec
Confidence            99999999864

>PRK07774 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-38  Score=264.26  Aligned_cols=243  Identities=37%  Similarity=0.605  Sum_probs=210.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      +++++|+++||||+++||.+++++|+++|++|++ .+|+++..+++.++++..+.+...+.+|++|.++++++++++.+.
T Consensus         2 ~~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~-~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (250)
T PRK07774          2 GRFDDKVAIVTGAAGGIGQAYAEALAREGASVVV-ADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSA   80 (250)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999888 478877777777777655557788999999999999999999999


Q ss_pred             cCCccEEEEccCCCC---CCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHH
Q 024338          102 WGTVDILINNAGITR---DTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSA  178 (269)
Q Consensus       102 ~~~id~li~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~  178 (269)
                      ++++|+||||||...   ..++.+.+.+++++.+++|+.+++.++++++|.|.+++.+++|++||..+..   +...|++
T Consensus        81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~---~~~~Y~~  157 (250)
T PRK07774         81 FGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL---YSNFYGL  157 (250)
T ss_pred             hCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC---CccccHH
Confidence            999999999999753   3456778899999999999999999999999999887789999999987754   4578999


Q ss_pred             hHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc-ChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCcc
Q 024338          179 AKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL-GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYIT  257 (269)
Q Consensus       179 sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~  257 (269)
                      ||++++.++++++.++...||+++.++||+++|++.... .+.......+..+...+.+|+|+++.+++++.. ...+.+
T Consensus       158 sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~-~~~~~~  236 (250)
T PRK07774        158 AKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTPKEFVADMVKGIPLSRMGTPEDLVGMCLFLLSD-EASWIT  236 (250)
T ss_pred             HHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCh-hhhCcC
Confidence            999999999999999999999999999999999987653 334445556677777788999999999999854 445789


Q ss_pred             ccEEEecCCccC
Q 024338          258 GQVLTIDGGMVM  269 (269)
Q Consensus       258 G~~i~~dgg~~~  269 (269)
                      |+++.+|+|.+|
T Consensus       237 g~~~~v~~g~~~  248 (250)
T PRK07774        237 GQIFNVDGGQII  248 (250)
T ss_pred             CCEEEECCCeec
Confidence            999999999765

>PRK06123 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.7e-38  Score=263.84  Aligned_cols=240  Identities=36%  Similarity=0.570  Sum_probs=207.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTV  105 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i  105 (269)
                      +|++|||||+++||.+++++|+++|++|++...++++..++..+.++..+.++.++++|++|.++++++++++.++++++
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL   81 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            58999999999999999999999999988755566666667777776666678889999999999999999999999999


Q ss_pred             cEEEEccCCCCC-CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC---CCeEEEEcCCccccCCCCC-hhhHHhH
Q 024338          106 DILINNAGITRD-TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK---KGRIINIASVVGLVGNIGQ-ANYSAAK  180 (269)
Q Consensus       106 d~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~~~iv~isS~~~~~~~~~~-~~Y~~sK  180 (269)
                      |++|||||.... .++.+.+.+++++.+++|+.+++.+++.+++.|.++.   .++||++||..+..+.++. ..|+++|
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~Y~~sK  161 (248)
T PRK06123         82 DALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAASK  161 (248)
T ss_pred             CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCCccchHHHH
Confidence            999999998643 4577889999999999999999999999999986542   5789999999998888764 6799999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc-ChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCcccc
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL-GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQ  259 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~  259 (269)
                      ++++.|+++++.++.+.||+++.|+||.+.|++.... .+..........|+++..+|+|++++++++++ +...+++|+
T Consensus       162 aa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~d~a~~~~~l~~-~~~~~~~g~  240 (248)
T PRK06123        162 GAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGGEPGRVDRVKAGIPMGRGGTAEEVARAILWLLS-DEASYTTGT  240 (248)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-ccccCccCC
Confidence            9999999999999999999999999999999975422 23344445556788888899999999999984 456689999


Q ss_pred             EEEecCC
Q 024338          260 VLTIDGG  266 (269)
Q Consensus       260 ~i~~dgg  266 (269)
                      ++.+|||
T Consensus       241 ~~~~~gg  247 (248)
T PRK06123        241 FIDVSGG  247 (248)
T ss_pred             EEeecCC
Confidence            9999997

>PRK05872 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9e-39  Score=274.62  Aligned_cols=235  Identities=25%  Similarity=0.395  Sum_probs=202.8

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      +.+++||++|||||++|||+++++.|+++|++|++ .+|+.+.++++.+++.. +.++..+.+|++|.++++++++++.+
T Consensus         4 ~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~-~~r~~~~l~~~~~~l~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~   81 (296)
T PRK05872          4 MTSLAGKVVVVTGAARGIGAELARRLHARGAKLAL-VDLEEAELAALAAELGG-DDRVLTVVADVTDLAAMQAAAEEAVE   81 (296)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHhcC-CCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            35678999999999999999999999999999888 58888888887777743 45677778999999999999999999


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhH
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                      .++++|++|||||.....++.+.+.++|++.+++|+.+++.+++.++|.|.++ .|+||++||..+..+.++...|++||
T Consensus        82 ~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK  160 (296)
T PRK05872         82 RFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER-RGYVLQVSSLAAFAAAPGMAAYCASK  160 (296)
T ss_pred             HcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCEEEEEeCHhhcCCCCCchHHHHHH
Confidence            99999999999999877888899999999999999999999999999998764 58999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccCh--HHHHHHHhc--CCCCCCCCHHHHHHHHHHhccCCCCCCc
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGE--DLEKKILEK--IPLGRYGQPEEVAGLVEFLALNPAAGYI  256 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~a~~~~~l~~~~~~~~~  256 (269)
                      ++++.|+++++.|+++.||+|++++||+++|++......  .........  .|.++..+|+++|+.+.++++. ...++
T Consensus       161 aal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~i~~~~~~-~~~~i  239 (296)
T PRK05872        161 AGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARLPWPLRRTTSVEKCAAAFVDGIER-RARRV  239 (296)
T ss_pred             HHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchhHHHHHhhCCCcccCCCCHHHHHHHHHHHHhc-CCCEE
Confidence            999999999999999999999999999999998764322  122222232  3567788999999999999954 45556


Q ss_pred             ccc
Q 024338          257 TGQ  259 (269)
Q Consensus       257 ~G~  259 (269)
                      ++.
T Consensus       240 ~~~  242 (296)
T PRK05872        240 YAP  242 (296)
T ss_pred             Ech
Confidence            554

>PRK09186 flagellin modification protein A; Provisional

Probab=100.00  E-value=2.5e-38  Score=266.09  Aligned_cols=240  Identities=25%  Similarity=0.399  Sum_probs=202.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHc--CCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS--GGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      +++|+++||||++|||+++|+.|+++|++|+++ .|+.+..+++.+++...  ...+.++.+|++|+++++++++++.+.
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~   80 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAA-DIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEK   80 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEE-ecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Confidence            468999999999999999999999999998884 78888887777777543  234567799999999999999999999


Q ss_pred             cCCccEEEEccCCCC---CCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCC-------
Q 024338          102 WGTVDILINNAGITR---DTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNI-------  171 (269)
Q Consensus       102 ~~~id~li~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~-------  171 (269)
                      ++++|++||||+...   ..++.+.+.++++..+++|+.+++.++++++|.|.+++.++||++||..+..+..       
T Consensus        81 ~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~  160 (256)
T PRK09186         81 YGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGT  160 (256)
T ss_pred             cCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccchhcccc
Confidence            999999999997542   2457788999999999999999999999999999887788999999987764321       


Q ss_pred             ---CChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhc
Q 024338          172 ---GQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLA  248 (269)
Q Consensus       172 ---~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~  248 (269)
                         ....|++||+++++++++++.|+.+.||+|+.++||.+.++..    ...........+.+++.+|+|+|+++++++
T Consensus       161 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~----~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  236 (256)
T PRK09186        161 SMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQP----EAFLNAYKKCCNGKGMLDPDDICGTLVFLL  236 (256)
T ss_pred             ccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCC----HHHHHHHHhcCCccCCCCHHHhhhhHhhee
Confidence               2246999999999999999999999999999999999987642    222333334455667789999999999999


Q ss_pred             cCCCCCCccccEEEecCCccC
Q 024338          249 LNPAAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       249 ~~~~~~~~~G~~i~~dgg~~~  269 (269)
                      + +...+++|+++.+|||+.+
T Consensus       237 ~-~~~~~~~g~~~~~~~g~~~  256 (256)
T PRK09186        237 S-DQSKYITGQNIIVDDGFSL  256 (256)
T ss_pred             c-cccccccCceEEecCCccC
Confidence            4 5567999999999999864

>PRK09134 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.7e-38  Score=263.66  Aligned_cols=241  Identities=32%  Similarity=0.467  Sum_probs=208.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      +...+|++|||||+++||++++++|+++|++|+++..++.+..+++.+++...+.++.++.+|++|.++++++++++.+.
T Consensus         5 ~~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~   84 (258)
T PRK09134          5 SMAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAA   84 (258)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            44568999999999999999999999999999886666777777777777666778889999999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKA  181 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  181 (269)
                      ++++|+||||||.....++.+.+.+++++.+++|+.+++.+++++++.+.++..+++|+++|..+..+.|++..|++||+
T Consensus        85 ~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p~~~~Y~~sK~  164 (258)
T PRK09134         85 LGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNPDFLSYTLSKA  164 (258)
T ss_pred             cCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCCCchHHHHHHH
Confidence            99999999999987777778889999999999999999999999999998777789999999888888888889999999


Q ss_pred             HHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEE
Q 024338          182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL  261 (269)
Q Consensus       182 al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i  261 (269)
                      +++.++++++.++.+. |++++|+||++.|+....  ...........+.++..+|+|+|+++++++++   .+++|+.+
T Consensus       165 a~~~~~~~la~~~~~~-i~v~~i~PG~v~t~~~~~--~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~---~~~~g~~~  238 (258)
T PRK09134        165 ALWTATRTLAQALAPR-IRVNAIGPGPTLPSGRQS--PEDFARQHAATPLGRGSTPEEIAAAVRYLLDA---PSVTGQMI  238 (258)
T ss_pred             HHHHHHHHHHHHhcCC-cEEEEeecccccCCcccC--hHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcC---CCcCCCEE
Confidence            9999999999999775 999999999999874221  12222334456677778999999999999954   36899999


Q ss_pred             EecCCcc
Q 024338          262 TIDGGMV  268 (269)
Q Consensus       262 ~~dgg~~  268 (269)
                      .+|||..
T Consensus       239 ~i~gg~~  245 (258)
T PRK09134        239 AVDGGQH  245 (258)
T ss_pred             EECCCee
Confidence            9999864

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=4.1e-38  Score=264.77  Aligned_cols=242  Identities=34%  Similarity=0.548  Sum_probs=207.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTV  105 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i  105 (269)
                      +|++|||||+++||.+++++|+++|++|+++.+++.+..++..+.++..+.++.++++|++|.+++.++++++.+.++++
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI   81 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            48999999999999999999999999998865455556666667776666788999999999999999999999999999


Q ss_pred             cEEEEccCCCCC--CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC------CCeEEEEcCCccccCCCCChhhH
Q 024338          106 DILINNAGITRD--TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK------KGRIINIASVVGLVGNIGQANYS  177 (269)
Q Consensus       106 d~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~------~~~iv~isS~~~~~~~~~~~~Y~  177 (269)
                      |++|||||....  .++.+.+.+++++.+++|+.+++.+++.+.+.|.++.      .+++|++||..+..+.++...|+
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~  161 (256)
T PRK12745         82 DCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEYC  161 (256)
T ss_pred             CEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCCCcccH
Confidence            999999997532  4577888899999999999999999999999997654      36799999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHh-cCCCCCCCCHHHHHHHHHHhccCCCCCCc
Q 024338          178 AAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILE-KIPLGRYGQPEEVAGLVEFLALNPAAGYI  256 (269)
Q Consensus       178 ~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~l~~~~~~~~~  256 (269)
                      .||++++.++++++.++.+.||++++++||+++|++.....+........ ..|.+++.+|+|+++++.+++ ++...+.
T Consensus       162 ~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~i~~l~-~~~~~~~  240 (256)
T PRK12745        162 ISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVTAKYDALIAKGLVPMPRWGEPEDVARAVAALA-SGDLPYS  240 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccchhHHhhhhhcCCCcCCCcCHHHHHHHHHHHh-CCccccc
Confidence            99999999999999999989999999999999999865544333222222 456777889999999999998 4556689


Q ss_pred             cccEEEecCCcc
Q 024338          257 TGQVLTIDGGMV  268 (269)
Q Consensus       257 ~G~~i~~dgg~~  268 (269)
                      +|++|.+|||+.
T Consensus       241 ~G~~~~i~gg~~  252 (256)
T PRK12745        241 TGQAIHVDGGLS  252 (256)
T ss_pred             CCCEEEECCCee
Confidence            999999999975

>PRK06198 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7e-38  Score=264.03  Aligned_cols=245  Identities=29%  Similarity=0.486  Sum_probs=212.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCc-EEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCK-VLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~-v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      ..+++|+++||||+++||..++++|+++|++ |++ +.|+.+..++..+++...+.++.++.+|+++.++++++++++.+
T Consensus         2 ~~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (260)
T PRK06198          2 GRLDGKVALVTGGTQGLGAAIARAFAERGAAGLVI-CGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADE   80 (260)
T ss_pred             CCCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEE-EcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            3478999999999999999999999999999 666 57887777777777766677888899999999999999999999


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCeEEEEcCCccccCCCCChhhHHh
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK-KGRIINIASVVGLVGNIGQANYSAA  179 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~~~Y~~s  179 (269)
                      .++++|++|||+|.....++.+.+.+++++.+++|+.+++.+++.+++.|.++. .+++|++||..+..+.++...|+.+
T Consensus        81 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~s  160 (260)
T PRK06198         81 AFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLAAYCAS  160 (260)
T ss_pred             HhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCCcchhHHH
Confidence            999999999999987767777889999999999999999999999999996653 5899999999999888999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc-------ChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCC
Q 024338          180 KAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL-------GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPA  252 (269)
Q Consensus       180 K~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~  252 (269)
                      |+++++++++++.|+...||+++.++||+++|++....       ...+........++++..+++++++++.++++ +.
T Consensus       161 K~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~-~~  239 (260)
T PRK06198        161 KGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQPFGRLLDPDEVARAVAFLLS-DE  239 (260)
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccCCccCCcCHHHHHHHHHHHcC-hh
Confidence            99999999999999999999999999999999864221       12233334445677888899999999999994 45


Q ss_pred             CCCccccEEEecCCcc
Q 024338          253 AGYITGQVLTIDGGMV  268 (269)
Q Consensus       253 ~~~~~G~~i~~dgg~~  268 (269)
                      .++++|++|.+|+|-+
T Consensus       240 ~~~~~G~~~~~~~~~~  255 (260)
T PRK06198        240 SGLMTGSVIDFDQSVW  255 (260)
T ss_pred             hCCccCceEeECCccc
Confidence            6789999999999854

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.8e-38  Score=292.59  Aligned_cols=241  Identities=38%  Similarity=0.620  Sum_probs=209.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      ..++|++|||||++|||+++|++|+++|++|++ +.|+.+.++++.+++   +.++.++.+|++|+++++++++++.+++
T Consensus         2 ~~~~k~~lITGas~gIG~aia~~l~~~G~~V~~-~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (520)
T PRK06484          2 KAQSRVVLVTGAAGGIGRAACQRFARAGDQVVV-ADRNVERARERADSL---GPDHHALAMDVSDEAQIREGFEQLHREF   77 (520)
T ss_pred             CCCCeEEEEECCCcHHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHh---CCceeEEEeccCCHHHHHHHHHHHHHHh
Confidence            457899999999999999999999999999988 478887777666555   4567889999999999999999999999


Q ss_pred             CCccEEEEccCCCC--CCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCC-eEEEEcCCccccCCCCChhhHHh
Q 024338          103 GTVDILINNAGITR--DTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKG-RIINIASVVGLVGNIGQANYSAA  179 (269)
Q Consensus       103 ~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~-~iv~isS~~~~~~~~~~~~Y~~s  179 (269)
                      +++|+||||||...  ..++.+.+.++|++.+++|+.+++.++++++|.|.+++.| +||++||..+..+.++...|+++
T Consensus        78 g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~~~~Y~as  157 (520)
T PRK06484         78 GRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSAS  157 (520)
T ss_pred             CCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCCCchHHHH
Confidence            99999999999743  2467788999999999999999999999999999776655 99999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChH---HHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCc
Q 024338          180 KAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGED---LEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYI  256 (269)
Q Consensus       180 K~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~  256 (269)
                      |++++.|+++++.|+.+.||+|+.|+||+++|++.....+.   .........+.+++.+|+++|+.+.||+ ++...++
T Consensus       158 Kaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~v~~l~-~~~~~~~  236 (520)
T PRK06484        158 KAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRIPLGRLGRPEEIAEAVFFLA-SDQASYI  236 (520)
T ss_pred             HHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhcCCCCCCcCHHHHHHHHHHHh-CccccCc
Confidence            99999999999999999999999999999999986543211   1223344567777889999999999999 4566799


Q ss_pred             cccEEEecCCcc
Q 024338          257 TGQVLTIDGGMV  268 (269)
Q Consensus       257 ~G~~i~~dgg~~  268 (269)
                      +|+++.+|||+.
T Consensus       237 ~G~~~~~~gg~~  248 (520)
T PRK06484        237 TGSTLVVDGGWT  248 (520)
T ss_pred             cCceEEecCCee
Confidence            999999999864

>PRK06057 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3e-38  Score=265.73  Aligned_cols=238  Identities=36%  Similarity=0.626  Sum_probs=203.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      ++||+++||||+++||.+++++|+++|++|+++ +|+....++..+++.     ..++++|++|.++++++++++.+.++
T Consensus         5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~-~r~~~~~~~~~~~~~-----~~~~~~D~~~~~~~~~~~~~~~~~~~   78 (255)
T PRK06057          5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVG-DIDPEAGKAAADEVG-----GLFVPTDVTDEDAVNALFDTAAETYG   78 (255)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHHHcC-----CcEEEeeCCCHHHHHHHHHHHHHHcC
Confidence            679999999999999999999999999999884 777766665555441     24789999999999999999999999


Q ss_pred             CccEEEEccCCCCC--CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCC-CCChhhHHhH
Q 024338          104 TVDILINNAGITRD--TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGN-IGQANYSAAK  180 (269)
Q Consensus       104 ~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~-~~~~~Y~~sK  180 (269)
                      ++|++|||||...+  .++.+.+.+.+++.+++|+.+++.+++.++|.|.+++.+++|++||..+..+. ++...|+.+|
T Consensus        79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~~~~~Y~~sK  158 (255)
T PRK06057         79 SVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATSQISYTASK  158 (255)
T ss_pred             CCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCCCCcchHHHH
Confidence            99999999997543  45667888999999999999999999999999987778899999998887765 4778899999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC---hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCcc
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG---EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYIT  257 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~  257 (269)
                      ++++.++++++.++.++||++++|+||+++|++.....   ...........|.+++.+|+++++++.+|++ +...+++
T Consensus       159 aal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~-~~~~~~~  237 (255)
T PRK06057        159 GGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPERAARRLVHVPMGRFAEPEEIAAAVAFLAS-DDASFIT  237 (255)
T ss_pred             HHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-ccccCcc
Confidence            99999999999999999999999999999999765432   1222233345677888999999999999984 5678999


Q ss_pred             ccEEEecCCcc
Q 024338          258 GQVLTIDGGMV  268 (269)
Q Consensus       258 G~~i~~dgg~~  268 (269)
                      |+.+.+|||+.
T Consensus       238 g~~~~~~~g~~  248 (255)
T PRK06057        238 ASTFLVDGGIS  248 (255)
T ss_pred             CcEEEECCCee
Confidence            99999999974

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=100.00  E-value=2.2e-38  Score=266.79  Aligned_cols=233  Identities=29%  Similarity=0.358  Sum_probs=197.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHH----cCCcEEEEecCCHHHHHHHHHHHHHc--CCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           28 VAVVTGASRGIGRAVATSLGK----AGCKVLVNYARSSKEAEEVCKEIEAS--GGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~----~G~~v~i~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      +++||||++|||+++|++|++    .|++|++ .+|+.+.++++.++++..  +.++.++.+|++|.++++++++++.+.
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~-~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   80 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVL-SARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALREL   80 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEE-EEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhc
Confidence            689999999999999999997    7999888 588888888888888752  457888999999999999999999887


Q ss_pred             cCCc----cEEEEccCCCCCC--cccC-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC--CCeEEEEcCCccccCCCC
Q 024338          102 WGTV----DILINNAGITRDT--LLMR-MKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK--KGRIINIASVVGLVGNIG  172 (269)
Q Consensus       102 ~~~i----d~li~~ag~~~~~--~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~iv~isS~~~~~~~~~  172 (269)
                      ++++    |+||||||.....  ...+ .+.+++++.+++|+.+++.+++.++|.|.+++  .++||++||..+..+.++
T Consensus        81 ~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~~  160 (256)
T TIGR01500        81 PRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKG  160 (256)
T ss_pred             cccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCCC
Confidence            7643    6999999975332  2232 35789999999999999999999999997653  479999999999999999


Q ss_pred             ChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc-----ChHHHHHHHhcCCCCCCCCHHHHHHHHHHh
Q 024338          173 QANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL-----GEDLEKKILEKIPLGRYGQPEEVAGLVEFL  247 (269)
Q Consensus       173 ~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l  247 (269)
                      ...|++||++++.|+++++.|+++.||+|++|+||+++|++....     .++..+......|.+++.+|+|+|+.+++|
T Consensus       161 ~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~~~~l  240 (256)
T TIGR01500       161 WALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQELKAKGKLVDPKVSAQKLLSL  240 (256)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhcCChhHHHHHHHHHhcCCCCCHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999986532     123334445566888899999999999999


Q ss_pred             ccCCCCCCccccEEEe
Q 024338          248 ALNPAAGYITGQVLTI  263 (269)
Q Consensus       248 ~~~~~~~~~~G~~i~~  263 (269)
                      ++  ..+++||+++.+
T Consensus       241 ~~--~~~~~~G~~~~~  254 (256)
T TIGR01500       241 LE--KDKFKSGAHVDY  254 (256)
T ss_pred             Hh--cCCcCCcceeec
Confidence            94  457999999865

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK05875 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-37  Score=265.22  Aligned_cols=245  Identities=29%  Similarity=0.460  Sum_probs=211.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHc--CCcEEEEEccCCCHHHHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS--GGQALTFGGDVSKEADVESMIKTAV   99 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dls~~~~~~~~~~~~~   99 (269)
                      +++++|++||||++++||.++++.|+++|++|++ ..|+.+..++..+++...  ..++.++.+|++|+++++++++++.
T Consensus         3 ~~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   81 (276)
T PRK05875          3 LSFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMI-VGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAAT   81 (276)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEE-EeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            3478999999999999999999999999999888 478877777777666543  3578889999999999999999999


Q ss_pred             HhcCCccEEEEccCCCCC-CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHH
Q 024338          100 DAWGTVDILINNAGITRD-TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSA  178 (269)
Q Consensus       100 ~~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~  178 (269)
                      ++++++|++|||||.... .++.+.+.+++++.+++|+.+++.+++++++.|.+++.++|+++||..+..+.++...|++
T Consensus        82 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~  161 (276)
T PRK05875         82 AWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHRWFGAYGV  161 (276)
T ss_pred             HHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCCCCcchHH
Confidence            999999999999997533 5667788899999999999999999999999998777889999999999988889999999


Q ss_pred             hHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC--hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCc
Q 024338          179 AKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG--EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYI  256 (269)
Q Consensus       179 sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~  256 (269)
                      +|++++.+++.++.++...||+++.|+||+++|++.....  +..........++.++..|+|+|+++.+|++. ...++
T Consensus       162 sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~-~~~~~  240 (276)
T PRK05875        162 TKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPELSADYRACTPLPRVGEVEDVANLAMFLLSD-AASWI  240 (276)
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHHHHHHHHcCCCCCCCcCHHHHHHHHHHHcCc-hhcCc
Confidence            9999999999999999999999999999999999865432  22223334456777888999999999999954 45689


Q ss_pred             cccEEEecCCcc
Q 024338          257 TGQVLTIDGGMV  268 (269)
Q Consensus       257 ~G~~i~~dgg~~  268 (269)
                      +|+++.+|+|+.
T Consensus       241 ~g~~~~~~~g~~  252 (276)
T PRK05875        241 TGQVINVDGGHM  252 (276)
T ss_pred             CCCEEEECCCee
Confidence            999999999974

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=100.00  E-value=1.1e-37  Score=261.23  Aligned_cols=245  Identities=44%  Similarity=0.703  Sum_probs=216.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      .+.+|++|||||+++||++++++|+++|++|++ ..|+.+......+++...+.++.++.+|++|.++++++++++.+++
T Consensus         3 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (251)
T PRK12826          3 DLEGRVALVTGAARGIGRAIAVRLAADGAEVIV-VDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDF   81 (251)
T ss_pred             CCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            457899999999999999999999999999888 4788777777777777666778899999999999999999999999


Q ss_pred             CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccc-cCCCCChhhHHhHH
Q 024338          103 GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGL-VGNIGQANYSAAKA  181 (269)
Q Consensus       103 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~-~~~~~~~~Y~~sK~  181 (269)
                      +++|++|||+|.....++.+.+.++++..++.|+.+++.+++.++|.|.+++.+++|++||..+. .+.++...|+.+|+
T Consensus        82 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~~y~~sK~  161 (251)
T PRK12826         82 GRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGYPGLAHYAASKA  161 (251)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccCCCCccHHHHHHH
Confidence            99999999999887777778899999999999999999999999999987778899999999988 78889999999999


Q ss_pred             HHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHH-HHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccE
Q 024338          182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDL-EKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQV  260 (269)
Q Consensus       182 al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~  260 (269)
                      +++.++++++.++.+.|++++.+.||.++|+......+.. ........|.+.+.+++|+|+++.+++ ++...+++|++
T Consensus       162 a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~-~~~~~~~~g~~  240 (251)
T PRK12826        162 GLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQWAEAIAAAIPLGRLGEPEDIAAAVLFLA-SDEARYITGQT  240 (251)
T ss_pred             HHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchHHHHHHHhcCCCCCCcCHHHHHHHHHHHh-CccccCcCCcE
Confidence            9999999999999989999999999999999765544332 344445667778889999999999998 44556789999


Q ss_pred             EEecCCccC
Q 024338          261 LTIDGGMVM  269 (269)
Q Consensus       261 i~~dgg~~~  269 (269)
                      |.+|||.++
T Consensus       241 ~~~~~g~~~  249 (251)
T PRK12826        241 LPVDGGATL  249 (251)
T ss_pred             EEECCCccC
Confidence            999999874

>PRK05876 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-38  Score=268.47  Aligned_cols=228  Identities=25%  Similarity=0.359  Sum_probs=196.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      .++++|++|||||++|||+++++.|+++|++|++ ..|+.+.++++.++++..+.++.++.+|++|.++++++++++.+.
T Consensus         2 ~~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~-~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   80 (275)
T PRK05876          2 DGFPGRGAVITGGASGIGLATGTEFARRGARVVL-GDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRL   80 (275)
T ss_pred             CCcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999887 578888888888888766778889999999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCeEEEEcCCccccCCCCChhhHHhH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK-KGRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                      ++++|+||||||.....++.+.+.+++++.+++|+.+++.+++.++|.|.+++ +|+||++||..+..+.++...|++||
T Consensus        81 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  160 (275)
T PRK05876         81 LGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAK  160 (275)
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCCCchHHHHH
Confidence            99999999999998778888999999999999999999999999999997665 68999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHH---H-----HHHhc-CCCCCCCCHHHHHHHHHHhccC
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLE---K-----KILEK-IPLGRYGQPEEVAGLVEFLALN  250 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~---~-----~~~~~-~~~~~~~~~~~~a~~~~~l~~~  250 (269)
                      +++.+|+++++.|+++.||+|++|+||+++|++.........   .     ..... .......+|+++|+.++..+..
T Consensus       161 ~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ai~~  239 (275)
T PRK05876        161 YGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAILA  239 (275)
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCccccccccccccccccccccCCCHHHHHHHHHHHHHc
Confidence            999999999999999999999999999999997543211000   0     00000 1112356899999999988744

>PRK12827 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-37  Score=259.04  Aligned_cols=242  Identities=45%  Similarity=0.752  Sum_probs=210.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEe---cCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHH
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNY---ARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAV   99 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~---~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~   99 (269)
                      ++.+|+++||||+++||+++++.|+++|++|+++.   .++.+..+++.+++...+.++.++.+|++|.++++++++++.
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   82 (249)
T PRK12827          3 SLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGV   82 (249)
T ss_pred             CcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            46689999999999999999999999999988743   234556666677776667788999999999999999999999


Q ss_pred             HhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHH-HHHHhCCCCeEEEEcCCccccCCCCChhhHH
Q 024338          100 DAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA-KIMMKKKKGRIINIASVVGLVGNIGQANYSA  178 (269)
Q Consensus       100 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~  178 (269)
                      +.++++|++|||+|.....++.+.+.+++++.+++|+.+++.+++++. +.+.+++.+++|++||..+..+.++...|+.
T Consensus        83 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~  162 (249)
T PRK12827         83 EEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVNYAA  162 (249)
T ss_pred             HHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCCCCchhHH
Confidence            998999999999998877778888999999999999999999999999 6666666789999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccc
Q 024338          179 AKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITG  258 (269)
Q Consensus       179 sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G  258 (269)
                      +|++++.++++++.++.+.|+++++++||+++|++.......  +......+...+.+++++++.+++++ .+...+++|
T Consensus       163 sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~va~~~~~l~-~~~~~~~~g  239 (249)
T PRK12827        163 SKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPT--EHLLNPVPVQRLGEPDEVAALVAFLV-SDAASYVTG  239 (249)
T ss_pred             HHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccchH--HHHHhhCCCcCCcCHHHHHHHHHHHc-CcccCCccC
Confidence            999999999999999998899999999999999976543321  33344556667779999999999998 445678999


Q ss_pred             cEEEecCCc
Q 024338          259 QVLTIDGGM  267 (269)
Q Consensus       259 ~~i~~dgg~  267 (269)
                      +++.+|||+
T Consensus       240 ~~~~~~~g~  248 (249)
T PRK12827        240 QVIPVDGGF  248 (249)
T ss_pred             cEEEeCCCC
Confidence            999999986

>PRK07109 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.9e-38  Score=272.12  Aligned_cols=227  Identities=29%  Similarity=0.404  Sum_probs=200.0

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      ++.+++|+++||||++|||++++++|+++|++|++ ..|+++.++++.+++++.+.++.++.+|++|.++++++++++.+
T Consensus         3 ~~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl-~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~   81 (334)
T PRK07109          3 LKPIGRQVVVITGASAGVGRATARAFARRGAKVVL-LARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEE   81 (334)
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            35678999999999999999999999999999888 47888888888888887778899999999999999999999999


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhH
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                      .++++|++|||||.....++.+.+.+++++.+++|+.+++.+++.++|.|.+++.++||++||..+..+.+....|++||
T Consensus        82 ~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asK  161 (334)
T PRK07109         82 ELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPLQSAYCAAK  161 (334)
T ss_pred             HCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCCcchHHHHHH
Confidence            99999999999998777788899999999999999999999999999999887789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhcc--CCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCC
Q 024338          181 AGVIGLTKTVAKEYAS--RNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNP  251 (269)
Q Consensus       181 ~al~~~~~~la~e~~~--~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~  251 (269)
                      +++++|+++++.|+..  .+|+++.|+||.++||+.........   ....+..++.+|+++|++++++++.+
T Consensus       162 ~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~~~~~---~~~~~~~~~~~pe~vA~~i~~~~~~~  231 (334)
T PRK07109        162 HAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWARSRLP---VEPQPVPPIYQPEVVADAILYAAEHP  231 (334)
T ss_pred             HHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhhhhcc---ccccCCCCCCCHHHHHHHHHHHHhCC
Confidence            9999999999999875  47999999999999997543211110   11223445679999999999999654

>PRK05599 hypothetical protein; Provisional

Probab=100.00  E-value=1.1e-37  Score=261.03  Aligned_cols=224  Identities=17%  Similarity=0.249  Sum_probs=192.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCC-cEEEEEccCCCHHHHHHHHHHHHHhcCCc
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGG-QALTFGGDVSKEADVESMIKTAVDAWGTV  105 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dls~~~~~~~~~~~~~~~~~~i  105 (269)
                      |+++||||++|||+++|++|+ +|++|++ .+|+.+.++++.+++++.+. ++.++.+|++|.++++++++++.+.++++
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil-~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   78 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVL-AARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEI   78 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEE-EeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCC
Confidence            579999999999999999999 5999888 48888889888888876654 47889999999999999999999999999


Q ss_pred             cEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCeEEEEcCCccccCCCCChhhHHhHHHHH
Q 024338          106 DILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK-KGRIINIASVVGLVGNIGQANYSAAKAGVI  184 (269)
Q Consensus       106 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK~al~  184 (269)
                      |++|||||.....++.+.+.+.+.+.+++|+.+.+.+++.++|.|.+++ +|+||++||..+..+.++...|++||+|++
T Consensus        79 d~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~  158 (246)
T PRK05599         79 SLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRANYVYGSTKAGLD  158 (246)
T ss_pred             CEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcCCcchhhHHHHHH
Confidence            9999999986555556677778889999999999999999999997664 689999999999999999999999999999


Q ss_pred             HHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEEEec
Q 024338          185 GLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTID  264 (269)
Q Consensus       185 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~d  264 (269)
                      +|+++++.|+.++||+|++++||+++|++.....+           .....+|+++|+.++++++....    ++.+.++
T Consensus       159 ~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~~~-----------~~~~~~pe~~a~~~~~~~~~~~~----~~~~~~~  223 (246)
T PRK05599        159 AFCQGLADSLHGSHVRLIIARPGFVIGSMTTGMKP-----------APMSVYPRDVAAAVVSAITSSKR----STTLWIP  223 (246)
T ss_pred             HHHHHHHHHhcCCCceEEEecCCcccchhhcCCCC-----------CCCCCCHHHHHHHHHHHHhcCCC----CceEEeC
Confidence            99999999999999999999999999997643321           11124899999999999965321    4556666


Q ss_pred             CCc
Q 024338          265 GGM  267 (269)
Q Consensus       265 gg~  267 (269)
                      +++
T Consensus       224 ~~~  226 (246)
T PRK05599        224 GRL  226 (246)
T ss_pred             ccH
Confidence            654

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=100.00  E-value=5.2e-37  Score=256.03  Aligned_cols=246  Identities=56%  Similarity=0.863  Sum_probs=218.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      |++.+|++|||||+++||.+++++|+++|+.|++ +.|+++..+.+..+++..+.++.++.+|++|.+++.++++++.+.
T Consensus         1 ~~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (246)
T PRK05653          1 MSLQGKTALVTGASRGIGRAIALRLAADGAKVVI-YDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEA   79 (246)
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEE-EeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            3567899999999999999999999999999766 588888888778888777788999999999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKA  181 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  181 (269)
                      ++++|++||++|.....+..+.+.+++++.++.|+.+++.+++++.|.|.+.+.+++|++||..+..+.++...|+.+|+
T Consensus        80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~~~~~~y~~sk~  159 (246)
T PRK05653         80 FGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNPGQTNYSAAKA  159 (246)
T ss_pred             hCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCCCCCcHhHhHHH
Confidence            99999999999987777777888999999999999999999999999998777789999999999888889999999999


Q ss_pred             HHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEE
Q 024338          182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL  261 (269)
Q Consensus       182 al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i  261 (269)
                      +++.++++++.++.+.|+++++++||.+.++..........+......+.+.+.+++|+++.+.+++ ++....++|++|
T Consensus       160 ~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~-~~~~~~~~g~~~  238 (246)
T PRK05653        160 GVIGFTKALALELASRGITVNAVAPGFIDTDMTEGLPEEVKAEILKEIPLGRLGQPEEVANAVAFLA-SDAASYITGQVI  238 (246)
T ss_pred             HHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHc-CchhcCccCCEE
Confidence            9999999999999888999999999999999776544444445555677788889999999999998 455567899999


Q ss_pred             EecCCccC
Q 024338          262 TIDGGMVM  269 (269)
Q Consensus       262 ~~dgg~~~  269 (269)
                      .+|||..+
T Consensus       239 ~~~gg~~~  246 (246)
T PRK05653        239 PVNGGMYM  246 (246)
T ss_pred             EeCCCeeC
Confidence            99999865

>PRK05884 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-37  Score=255.90  Aligned_cols=212  Identities=25%  Similarity=0.336  Sum_probs=177.7

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCccE
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDI  107 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~  107 (269)
                      +++||||++|||+++++.|+++|++|++ ..|+.++++++.+++     .+..+.+|++|.++++++++++.+   ++|+
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~-~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~~~~---~id~   72 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTL-VGARRDDLEVAAKEL-----DVDAIVCDNTDPASLEEARGLFPH---HLDT   72 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHhc-----cCcEEecCCCCHHHHHHHHHHHhh---cCcE
Confidence            4899999999999999999999999888 478877776665544     355788999999999999887753   6999


Q ss_pred             EEEccCCCCC------CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHH
Q 024338          108 LINNAGITRD------TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKA  181 (269)
Q Consensus       108 li~~ag~~~~------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  181 (269)
                      +|||||....      .++.+ +.++|++.+++|+.+++.++++++|.|+  +.|+||++||..    .++...|++||+
T Consensus        73 lv~~ag~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~--~~g~Iv~isS~~----~~~~~~Y~asKa  145 (223)
T PRK05884         73 IVNVPAPSWDAGDPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLR--SGGSIISVVPEN----PPAGSAEAAIKA  145 (223)
T ss_pred             EEECCCccccCCCCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhh--cCCeEEEEecCC----CCCccccHHHHH
Confidence            9999985321      12333 4689999999999999999999999995  358999999976    356789999999


Q ss_pred             HHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEE
Q 024338          182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL  261 (269)
Q Consensus       182 al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i  261 (269)
                      |+.+|+++++.|++++||+||+|+||+++|++....         ...|.   ..|+|+++.+.||+ ++++++++|+++
T Consensus       146 al~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~~~---------~~~p~---~~~~~ia~~~~~l~-s~~~~~v~G~~i  212 (223)
T PRK05884        146 ALSNWTAGQAAVFGTRGITINAVACGRSVQPGYDGL---------SRTPP---PVAAEIARLALFLT-TPAARHITGQTL  212 (223)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEecCccCchhhhhc---------cCCCC---CCHHHHHHHHHHHc-CchhhccCCcEE
Confidence            999999999999999999999999999999864221         11232   37999999999998 567789999999


Q ss_pred             EecCCcc
Q 024338          262 TIDGGMV  268 (269)
Q Consensus       262 ~~dgg~~  268 (269)
                      .+|||++
T Consensus       213 ~vdgg~~  219 (223)
T PRK05884        213 HVSHGAL  219 (223)
T ss_pred             EeCCCee
Confidence            9999986

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.1e-36  Score=255.46  Aligned_cols=242  Identities=38%  Similarity=0.547  Sum_probs=205.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      +++++|++|||||+++||++++++|+++|+++++..+++.+........++..+.+...+.+|+++.++++++++++.+.
T Consensus         2 ~~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (252)
T PRK06077          2 YSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDR   81 (252)
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHH
Confidence            56789999999999999999999999999998876555666666666666666667888999999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKA  181 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  181 (269)
                      ++++|++|||||.....++.+.+.+.+++.+++|+.+.+.+++.+.|.|.+  .+++|++||..+..+.++...|+++|+
T Consensus        82 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~Y~~sK~  159 (252)
T PRK06077         82 YGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMRE--GGAIVNIASVAGIRPAYGLSIYGAMKA  159 (252)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhc--CcEEEEEcchhccCCCCCchHHHHHHH
Confidence            999999999999877777778888999999999999999999999999854  479999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccCh---HHHHHHH-hcCCCCCCCCHHHHHHHHHHhccCCCCCCcc
Q 024338          182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGE---DLEKKIL-EKIPLGRYGQPEEVAGLVEFLALNPAAGYIT  257 (269)
Q Consensus       182 al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~  257 (269)
                      +++.++++++.|+.+ +|+++.+.||+++|++......   ...+... ...+.+++.+|+|+|++++++++.+   ..+
T Consensus       160 ~~~~~~~~l~~~~~~-~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~---~~~  235 (252)
T PRK06077        160 AVINLTKYLALELAP-KIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEKFTLMGKILDPEEVAEFVAAILKIE---SIT  235 (252)
T ss_pred             HHHHHHHHHHHHHhc-CCEEEEEeeCCccChHHHhhhhcccccHHHHHHhcCcCCCCCCHHHHHHHHHHHhCcc---ccC
Confidence            999999999999988 9999999999999997533211   1011111 2234567789999999999999532   478


Q ss_pred             ccEEEecCCccC
Q 024338          258 GQVLTIDGGMVM  269 (269)
Q Consensus       258 G~~i~~dgg~~~  269 (269)
                      |+++.+|+|+.+
T Consensus       236 g~~~~i~~g~~~  247 (252)
T PRK06077        236 GQVFVLDSGESL  247 (252)
T ss_pred             CCeEEecCCeec
Confidence            999999999764

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=4e-37  Score=278.89  Aligned_cols=242  Identities=34%  Similarity=0.542  Sum_probs=205.3

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCC--HHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARS--SKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTA   98 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~--~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~   98 (269)
                      ...+++|++|||||++|||.++++.|+++|++|+++ .++  .+.++++.+++     ....+.+|++|.++++++++++
T Consensus       205 ~~~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~-~~~~~~~~l~~~~~~~-----~~~~~~~Dv~~~~~~~~~~~~~  278 (450)
T PRK08261        205 DRPLAGKVALVTGAARGIGAAIAEVLARDGAHVVCL-DVPAAGEALAAVANRV-----GGTALALDITAPDAPARIAEHL  278 (450)
T ss_pred             ccCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCCccHHHHHHHHHHc-----CCeEEEEeCCCHHHHHHHHHHH
Confidence            345679999999999999999999999999998885 443  23333333332     2346889999999999999999


Q ss_pred             HHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHH
Q 024338           99 VDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSA  178 (269)
Q Consensus        99 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~  178 (269)
                      .+.++++|++|||||......+.+.+.++|+..+++|+.+++.+.+.+++.+..+++++||++||..+..+.+++..|++
T Consensus       279 ~~~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~~~~Y~a  358 (450)
T PRK08261        279 AERHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRGQTNYAA  358 (450)
T ss_pred             HHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCChHHHH
Confidence            99999999999999988777888899999999999999999999999999665567799999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccc
Q 024338          179 AKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITG  258 (269)
Q Consensus       179 sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G  258 (269)
                      +|++++.|+++++.++.+.||++++|+||+++|++.........+......++.+...|+|+|+++.||+ ++.+.++||
T Consensus       359 sKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~l~~~~~p~dva~~~~~l~-s~~~~~itG  437 (450)
T PRK08261        359 SKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTAAIPFATREAGRRMNSLQQGGLPVDVAETIAWLA-SPASGGVTG  437 (450)
T ss_pred             HHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhccchhHHHHHhhcCCcCCCCCHHHHHHHHHHHh-ChhhcCCCC
Confidence            9999999999999999999999999999999999876543322222222345666678999999999998 567789999


Q ss_pred             cEEEecCCccC
Q 024338          259 QVLTIDGGMVM  269 (269)
Q Consensus       259 ~~i~~dgg~~~  269 (269)
                      ++|.+|||.++
T Consensus       438 ~~i~v~g~~~~  448 (450)
T PRK08261        438 NVVRVCGQSLL  448 (450)
T ss_pred             CEEEECCCccc
Confidence            99999999864

>PRK07060 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-36  Score=254.33  Aligned_cols=238  Identities=30%  Similarity=0.465  Sum_probs=202.4

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      ++++++|+++|||++++||.++++.|+++|++|++ +.|+.+..+++.++.     ...++.+|+++.+++++++++   
T Consensus         4 ~~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~-~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~---   74 (245)
T PRK07060          4 AFDFSGKSVLVTGASSGIGRACAVALAQRGARVVA-AARNAAALDRLAGET-----GCEPLRLDVGDDAAIRAALAA---   74 (245)
T ss_pred             ccccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHh-----CCeEEEecCCCHHHHHHHHHH---
Confidence            35678999999999999999999999999999887 578877666555433     245788999999988887765   


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCeEEEEcCCccccCCCCChhhHHh
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK-KGRIINIASVVGLVGNIGQANYSAA  179 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~~~Y~~s  179 (269)
                       ++++|++|||||.....+..+.+.+++++.+++|+.+++.+++++++.+.++. .+++|++||..+..+.++...|+.+
T Consensus        75 -~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~s  153 (245)
T PRK07060         75 -AGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCAS  153 (245)
T ss_pred             -hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCCCcHhHHH
Confidence             46899999999987766677788999999999999999999999999987554 4899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc--ChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCcc
Q 024338          180 KAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL--GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYIT  257 (269)
Q Consensus       180 K~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~  257 (269)
                      |++++.++++++.++.+.||+++.++||+++|++....  .....+......+.+++.+++|+++++.++++ +...+++
T Consensus       154 K~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~-~~~~~~~  232 (245)
T PRK07060        154 KAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAIPLGRFAEVDDVAAPILFLLS-DAASMVS  232 (245)
T ss_pred             HHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcC-cccCCcc
Confidence            99999999999999998899999999999999975421  12223344456678889999999999999995 5567899


Q ss_pred             ccEEEecCCccC
Q 024338          258 GQVLTIDGGMVM  269 (269)
Q Consensus       258 G~~i~~dgg~~~  269 (269)
                      ||.|.+|||+++
T Consensus       233 G~~~~~~~g~~~  244 (245)
T PRK07060        233 GVSLPVDGGYTA  244 (245)
T ss_pred             CcEEeECCCccC
Confidence            999999999864

>PRK08703 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5e-37  Score=255.85  Aligned_cols=233  Identities=22%  Similarity=0.274  Sum_probs=200.1

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHc-CCcEEEEEccCCC--HHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS-GGQALTFGGDVSK--EADVESMIKT   97 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dls~--~~~~~~~~~~   97 (269)
                      |.++++|+++||||++|||.+++++|+++|++|++ .+|+.+..+++.+++.+. +.+..++.+|+++  .+++.+++++
T Consensus         1 ~~~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   79 (239)
T PRK08703          1 MATLSDKTILVTGASQGLGEQVAKAYAAAGATVIL-VARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAAT   79 (239)
T ss_pred             CCCCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEE-EeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHH
Confidence            34678999999999999999999999999999888 588888888888877654 3456778999985  5789999999


Q ss_pred             HHHhc-CCccEEEEccCCCCC-CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChh
Q 024338           98 AVDAW-GTVDILINNAGITRD-TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQAN  175 (269)
Q Consensus        98 ~~~~~-~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~  175 (269)
                      +.+.+ +++|++|||||.... .++.+.+.+++++.+++|+.+++.+++.++|.|.+.+.++++++||..+..+.++...
T Consensus        80 i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~  159 (239)
T PRK08703         80 IAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGG  159 (239)
T ss_pred             HHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCCCCccc
Confidence            99988 789999999997533 5678889999999999999999999999999998777899999999999999999999


Q ss_pred             hHHhHHHHHHHHHHHHHHhccC-CeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCC
Q 024338          176 YSAAKAGVIGLTKTVAKEYASR-NINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAG  254 (269)
Q Consensus       176 Y~~sK~al~~~~~~la~e~~~~-gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~  254 (269)
                      |++||++++.|+++++.|+.++ +|+|+.|.||+++|++.....+..        .......+++++..+.|++ ++++.
T Consensus       160 Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~-~~~~~  230 (239)
T PRK08703        160 FGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSHPGE--------AKSERKSYGDVLPAFVWWA-SAESK  230 (239)
T ss_pred             hHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccccCCCC--------CccccCCHHHHHHHHHHHh-Ccccc
Confidence            9999999999999999999887 699999999999999754332110        0112348999999999999 57788


Q ss_pred             CccccEEEe
Q 024338          255 YITGQVLTI  263 (269)
Q Consensus       255 ~~~G~~i~~  263 (269)
                      ++||++|.+
T Consensus       231 ~~~g~~~~~  239 (239)
T PRK08703        231 GRSGEIVYL  239 (239)
T ss_pred             CcCCeEeeC
Confidence            999999875

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=100.00  E-value=1.1e-36  Score=286.64  Aligned_cols=253  Identities=31%  Similarity=0.440  Sum_probs=215.0

Q ss_pred             hhhccccc---CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHc--CCcEEEEEccCCCH
Q 024338           14 EQATNEAA---QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS--GGQALTFGGDVSKE   88 (269)
Q Consensus        14 ~~~~~~~~---~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dls~~   88 (269)
                      |+++...+   ..+++|++|||||++|||++++++|+++|++|++ ..|+.+.++++.+++...  ..++..+.+|++|.
T Consensus       399 e~~kl~~~~~~~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi-~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~  477 (676)
T TIGR02632       399 EEAKLRRMPKEKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVL-ADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDE  477 (676)
T ss_pred             hHHhhccCCCCcCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEE-EeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCH
Confidence            56555333   4578999999999999999999999999999888 478887777777766542  23577899999999


Q ss_pred             HHHHHHHHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCeEEEEcCCccc
Q 024338           89 ADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK-KGRIINIASVVGL  167 (269)
Q Consensus        89 ~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~  167 (269)
                      ++++++++++.+.++++|+||||||.....++.+.+.++|+..+++|+.+++.+++.+++.|.+++ .++||++||..+.
T Consensus       478 ~~v~~a~~~i~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~  557 (676)
T TIGR02632       478 QAVKAAFADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAV  557 (676)
T ss_pred             HHHHHHHHHHHHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhc
Confidence            999999999999999999999999987767788889999999999999999999999999997664 5799999999999


Q ss_pred             cCCCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCC--cccc-c-----------ChHHHHHHHhcCCCCC
Q 024338          168 VGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASD--MTAK-L-----------GEDLEKKILEKIPLGR  233 (269)
Q Consensus       168 ~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~--~~~~-~-----------~~~~~~~~~~~~~~~~  233 (269)
                      .+.++...|++||++++.++++++.|+.+.||+||+|+||.+.++  +... .           ..+..+......++++
T Consensus       558 ~~~~~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~r  637 (676)
T TIGR02632       558 YAGKNASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLLKR  637 (676)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHhcCCcCC
Confidence            999999999999999999999999999999999999999998653  2211 0           1122233455678888


Q ss_pred             CCCHHHHHHHHHHhccCCCCCCccccEEEecCCcc
Q 024338          234 YGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMV  268 (269)
Q Consensus       234 ~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg~~  268 (269)
                      ..+|+|+|+++.+|++ +..+++||++|.+|||+.
T Consensus       638 ~v~peDVA~av~~L~s-~~~~~~TG~~i~vDGG~~  671 (676)
T TIGR02632       638 HIFPADIAEAVFFLAS-SKSEKTTGCIITVDGGVP  671 (676)
T ss_pred             CcCHHHHHHHHHHHhC-CcccCCcCcEEEECCCch
Confidence            8999999999999984 456689999999999974

>PRK07074 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-36  Score=255.14  Aligned_cols=238  Identities=34%  Similarity=0.545  Sum_probs=206.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTV  105 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i  105 (269)
                      +|++|||||+++||.+++++|+++|++|++ ..|+.+..+++.+.+.  +.++.++.+|++|.+++.++++++.++++++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~-~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLA-LDIDAAALAAFADALG--DARFVPVACDLTDAASLAAALANAAAERGPV   78 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            589999999999999999999999999888 4788877777776663  3568889999999999999999999999999


Q ss_pred             cEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHHHH
Q 024338          106 DILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIG  185 (269)
Q Consensus       106 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~  185 (269)
                      |++|||+|.....++.+.+.+++++.+++|+.+++.+++++++.+.+++.+++|++||..+..+ .+...|+.+|++++.
T Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-~~~~~y~~sK~a~~~  157 (257)
T PRK07074         79 DVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAA-LGHPAYSAAKAGLIH  157 (257)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCC-CCCcccHHHHHHHHH
Confidence            9999999987766777888999999999999999999999999998878899999999876543 466799999999999


Q ss_pred             HHHHHHHHhccCCeEEEEEecCCccCCccccc---ChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEEE
Q 024338          186 LTKTVAKEYASRNINVNAIAPGFIASDMTAKL---GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLT  262 (269)
Q Consensus       186 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~  262 (269)
                      ++++++.++.+.||+|+.++||+++|++....   .+.+........+.+++..++|+++++++|+ ++...+++|+.+.
T Consensus       158 ~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~-~~~~~~~~g~~~~  236 (257)
T PRK07074        158 YTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKWYPLQDFATPDDVANAVLFLA-SPAARAITGVCLP  236 (257)
T ss_pred             HHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHc-CchhcCcCCcEEE
Confidence            99999999999999999999999999975432   2233344444567788899999999999999 4566789999999


Q ss_pred             ecCCcc
Q 024338          263 IDGGMV  268 (269)
Q Consensus       263 ~dgg~~  268 (269)
                      +|+|+.
T Consensus       237 ~~~g~~  242 (257)
T PRK07074        237 VDGGLT  242 (257)
T ss_pred             eCCCcC
Confidence            999975

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=100.00  E-value=3.5e-36  Score=251.57  Aligned_cols=240  Identities=36%  Similarity=0.562  Sum_probs=206.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCcc
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVD  106 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id  106 (269)
                      |++|||||+++||.+++++|+++|++|+++..|+.+..++...++...+.++..+++|++|.++++++++++.+.++++|
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id   81 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA   81 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence            68999999999999999999999999887667888777777777776667788899999999999999999999999999


Q ss_pred             EEEEccCCC-CCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC---CCCeEEEEcCCccccCCCC-ChhhHHhHH
Q 024338          107 ILINNAGIT-RDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKK---KKGRIINIASVVGLVGNIG-QANYSAAKA  181 (269)
Q Consensus       107 ~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~---~~~~iv~isS~~~~~~~~~-~~~Y~~sK~  181 (269)
                      ++|||+|.. ...++.+.+.++++..+++|+.+++.+++.+++.+.++   ..+++|++||..+..+.++ ...|+++|+
T Consensus        82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~~~~~Y~~sK~  161 (247)
T PRK09730         82 ALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASKG  161 (247)
T ss_pred             EEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCCcccchHhHHH
Confidence            999999975 34567788999999999999999999999999998764   3578999999998888776 468999999


Q ss_pred             HHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc-ChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccE
Q 024338          182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL-GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQV  260 (269)
Q Consensus       182 al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~  260 (269)
                      +++.++++++.++.+.||++++++||+++||+.... .+..........|+++..+|+|+|+.+++++++ ...+++|++
T Consensus       162 ~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~-~~~~~~g~~  240 (247)
T PRK09730        162 AIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPMQRGGQPEEVAQAIVWLLSD-KASYVTGSF  240 (247)
T ss_pred             HHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCCHHHHHHHHhcCCCCCCcCHHHHHHHHHhhcCh-hhcCccCcE
Confidence            999999999999999999999999999999975432 233334445566777777999999999999954 556899999


Q ss_pred             EEecCCc
Q 024338          261 LTIDGGM  267 (269)
Q Consensus       261 i~~dgg~  267 (269)
                      +.+|||.
T Consensus       241 ~~~~g~~  247 (247)
T PRK09730        241 IDLAGGK  247 (247)
T ss_pred             EecCCCC
Confidence            9999983

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=5.9e-36  Score=249.98  Aligned_cols=245  Identities=45%  Similarity=0.722  Sum_probs=213.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      .+.+|++|||||+++||.+++++|+++|++++++.+++.+..+.+.+.+...+.++.++.+|++|.++++++++++.+.+
T Consensus         3 ~~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (249)
T PRK12825          3 SLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERF   82 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHc
Confidence            45678999999999999999999999999988866777777777777777667788999999999999999999999988


Q ss_pred             CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHH
Q 024338          103 GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAG  182 (269)
Q Consensus       103 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  182 (269)
                      +++|++||++|.....++.+.+.+++++.++.|+.+++.+++.+.|.+.+.+.+++|++||..+..+.++...|+.+|++
T Consensus        83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~~~~~y~~sK~~  162 (249)
T PRK12825         83 GRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSNYAAAKAG  162 (249)
T ss_pred             CCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCCCchHHHHHHHH
Confidence            99999999999877777778889999999999999999999999999988788999999999999888899999999999


Q ss_pred             HHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEEE
Q 024338          183 VIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLT  262 (269)
Q Consensus       183 l~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~  262 (269)
                      ++.+++.++.++.+.|++++.++||.+.|++................+.+++.+++|+++.+.++++. ...+.+|++|.
T Consensus       163 ~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~-~~~~~~g~~~~  241 (249)
T PRK12825        163 LVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEAREAKDAETPLGRSGTPEDIARAVAFLCSD-ASDYITGQVIE  241 (249)
T ss_pred             HHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccchhHHhhhccCCCCCCcCHHHHHHHHHHHhCc-cccCcCCCEEE
Confidence            99999999999988899999999999999986554332222212245677788999999999999954 45689999999


Q ss_pred             ecCCcc
Q 024338          263 IDGGMV  268 (269)
Q Consensus       263 ~dgg~~  268 (269)
                      ++||..
T Consensus       242 i~~g~~  247 (249)
T PRK12825        242 VTGGVD  247 (249)
T ss_pred             eCCCEe
Confidence            999964

>PRK07825 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-36  Score=256.61  Aligned_cols=217  Identities=26%  Similarity=0.420  Sum_probs=192.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      |++++|++|||||++|||++++++|+++|++|++ ..|+++.++++.+++.    ++.++.+|++|.++++++++++.+.
T Consensus         1 ~~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~-~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~   75 (273)
T PRK07825          1 DDLRGKVVAITGGARGIGLATARALAALGARVAI-GDLDEALAKETAAELG----LVVGGPLDVTDPASFAAFLDAVEAD   75 (273)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHhc----cceEEEccCCCHHHHHHHHHHHHHH
Confidence            4577899999999999999999999999999887 5788887777666552    5778899999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKA  181 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  181 (269)
                      ++++|++|||||.....++.+.+.+++++.+++|+.+++.+++.++|.|++++.++||++||..+..+.++...|++||+
T Consensus        76 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa  155 (273)
T PRK07825         76 LGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCASKH  155 (273)
T ss_pred             cCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCCCCcchHHHHH
Confidence            99999999999998777888889999999999999999999999999999888899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCC
Q 024338          182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPA  252 (269)
Q Consensus       182 al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~  252 (269)
                      +++.|+++++.|+.+.||+++.|+||+++|++......         .......+|+++|+.++.++.++.
T Consensus       156 a~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~~~---------~~~~~~~~~~~va~~~~~~l~~~~  217 (273)
T PRK07825        156 AVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGTGG---------AKGFKNVEPEDVAAAIVGTVAKPR  217 (273)
T ss_pred             HHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhccccc---------ccCCCCCCHHHHHHHHHHHHhCCC
Confidence            99999999999999999999999999999997654311         011235689999999999986543

>PRK06182 short chain dehydrogenase; Validated

Probab=100.00  E-value=4.8e-36  Score=254.82  Aligned_cols=219  Identities=28%  Similarity=0.355  Sum_probs=189.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      ++|+++||||++|||++++++|+++|++|+++ .|+.+.++++.+      ..+.++.+|++|.++++++++++.+.+++
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~-~r~~~~l~~~~~------~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~   74 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGA-ARRVDKMEDLAS------LGVHPLSLDVTDEASIKAAVDTIIAEEGR   74 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEE-eCCHHHHHHHHh------CCCeEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            57999999999999999999999999999884 777766554332      24778999999999999999999999999


Q ss_pred             ccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHHH
Q 024338          105 VDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVI  184 (269)
Q Consensus       105 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~  184 (269)
                      +|+||||||.....++.+.+.++++..+++|+.+++.+++.++|.|++++.++||++||..+..+.+....|++||++++
T Consensus        75 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~  154 (273)
T PRK06182         75 IDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTPLGAWYHATKFALE  154 (273)
T ss_pred             CCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCCCCccHhHHHHHHHH
Confidence            99999999998778888999999999999999999999999999998888899999999999888888889999999999


Q ss_pred             HHHHHHHHHhccCCeEEEEEecCCccCCcccccC------------hH----HHHHHHhcCCCCCCCCHHHHHHHHHHhc
Q 024338          185 GLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG------------ED----LEKKILEKIPLGRYGQPEEVAGLVEFLA  248 (269)
Q Consensus       185 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~------------~~----~~~~~~~~~~~~~~~~~~~~a~~~~~l~  248 (269)
                      +|+++++.|+.+.||+++.|+||+++|++.....            .+    ..+.+....+.++..+|+++|+++++++
T Consensus       155 ~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~~  234 (273)
T PRK06182        155 GFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTYGSGRLSDPSVIADAISKAV  234 (273)
T ss_pred             HHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHHhhccccCCCHHHHHHHHHHHH
Confidence            9999999999999999999999999999752111            00    1122333445677889999999999998


Q ss_pred             cC
Q 024338          249 LN  250 (269)
Q Consensus       249 ~~  250 (269)
                      +.
T Consensus       235 ~~  236 (273)
T PRK06182        235 TA  236 (273)
T ss_pred             hC
Confidence            64

>PRK07454 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.9e-36  Score=249.21  Aligned_cols=235  Identities=32%  Similarity=0.434  Sum_probs=201.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      ++|+++||||+++||.+++++|+++|++|++ +.|+++..+++.+++++.+.++.++.+|++|.+++.++++++.+++++
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLAL-VARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGC   83 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4689999999999999999999999999888 578888777787777766678889999999999999999999999999


Q ss_pred             ccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHHH
Q 024338          105 VDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVI  184 (269)
Q Consensus       105 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~  184 (269)
                      +|++|||+|.....++.+.+.+++++.+++|+.+++.+++.++|.|.+++.+++|++||..+..+.++...|+.+|++++
T Consensus        84 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~  163 (241)
T PRK07454         84 PDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQWGAYCVSKAALA  163 (241)
T ss_pred             CCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCCCccHHHHHHHHHH
Confidence            99999999987767778889999999999999999999999999998877899999999999999999999999999999


Q ss_pred             HHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEEEec
Q 024338          185 GLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTID  264 (269)
Q Consensus       185 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~d  264 (269)
                      .++++++.++.+.||++++|.||+++|++......  .    .........+|+++|++++++++.++..++.+-++.-+
T Consensus       164 ~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~~~--~----~~~~~~~~~~~~~va~~~~~l~~~~~~~~~~~~~~~~~  237 (241)
T PRK07454        164 AFTKCLAEEERSHGIRVCTITLGAVNTPLWDTETV--Q----ADFDRSAMLSPEQVAQTILHLAQLPPSAVIEDLTLMPS  237 (241)
T ss_pred             HHHHHHHHHhhhhCCEEEEEecCcccCCccccccc--c----cccccccCCCHHHHHHHHHHHHcCCccceeeeEEeecC
Confidence            99999999999999999999999999997542110  0    01111234689999999999997776555544445444


Q ss_pred             CC
Q 024338          265 GG  266 (269)
Q Consensus       265 gg  266 (269)
                      +|
T Consensus       238 ~~  239 (241)
T PRK07454        238 AG  239 (241)
T ss_pred             CC
Confidence            44

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=100.00  E-value=1.7e-35  Score=246.12  Aligned_cols=239  Identities=62%  Similarity=0.935  Sum_probs=210.0

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCccEE
Q 024338           29 AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDIL  108 (269)
Q Consensus        29 vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l  108 (269)
                      +||||++++||.+++++|+++|++|+++.+++.+..+++.+.+...+.++.++.+|++|.++++++++++.++++++|++
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL   80 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            58999999999999999999999988864444456666777777667788899999999999999999999999999999


Q ss_pred             EEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHHHHHHH
Q 024338          109 INNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTK  188 (269)
Q Consensus       109 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~~  188 (269)
                      ||++|.....++.+.+.+.+++.+++|+.+++.+++.+.+.+.+++.++++++||..+..+.+++..|+.+|++++.+++
T Consensus        81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~~~~y~~~k~a~~~~~~  160 (239)
T TIGR01830        81 VNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVIGFTK  160 (239)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCCchhHHHHHHHHHHHH
Confidence            99999876666677888999999999999999999999999977778899999999999999999999999999999999


Q ss_pred             HHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEEEecCCcc
Q 024338          189 TVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMV  268 (269)
Q Consensus       189 ~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg~~  268 (269)
                      +++.++...|++++.++||+++|++.....+..........+.+++.+++++++.+++++. +...+++|+++.+|+|++
T Consensus       161 ~l~~~~~~~g~~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~-~~~~~~~g~~~~~~~g~~  239 (239)
T TIGR01830       161 SLAKELASRNITVNAVAPGFIDTDMTDKLSEKVKKKILSQIPLGRFGTPEEVANAVAFLAS-DEASYITGQVIHVDGGMY  239 (239)
T ss_pred             HHHHHHhhcCeEEEEEEECCCCChhhhhcChHHHHHHHhcCCcCCCcCHHHHHHHHHHHhC-cccCCcCCCEEEeCCCcC
Confidence            9999998899999999999999987665555444555566777888899999999999984 455679999999999964

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PLN00015 protochlorophyllide reductase

Probab=100.00  E-value=2.8e-36  Score=260.51  Aligned_cols=235  Identities=19%  Similarity=0.239  Sum_probs=192.2

Q ss_pred             EEeCCCCchHHHHHHHHHHcC-CcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCccEE
Q 024338           30 VVTGASRGIGRAVATSLGKAG-CKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDIL  108 (269)
Q Consensus        30 lItGas~giG~~~a~~l~~~G-~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l  108 (269)
                      |||||++|||.+++++|+++| ++|++ ..|+.+..+++.+++...+.++.++.+|++|.++++++++++.+.++++|+|
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~l   79 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVM-ACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVL   79 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEE-EeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEE
Confidence            699999999999999999999 88877 5788887777777775445578889999999999999999999888999999


Q ss_pred             EEccCCCCC-CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC--CCeEEEEcCCccccC----------------
Q 024338          109 INNAGITRD-TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK--KGRIINIASVVGLVG----------------  169 (269)
Q Consensus       109 i~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~iv~isS~~~~~~----------------  169 (269)
                      |||||+... .++.+.+.++|++.+++|+.+++.+++.++|.|.+++  .|+||++||..+..+                
T Consensus        80 InnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~  159 (308)
T PLN00015         80 VCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLR  159 (308)
T ss_pred             EECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhhh
Confidence            999998543 3566788999999999999999999999999998765  689999999876421                


Q ss_pred             -------------------CCCChhhHHhHHHHHHHHHHHHHHhcc-CCeEEEEEecCCc-cCCcccccChHHHH--HHH
Q 024338          170 -------------------NIGQANYSAAKAGVIGLTKTVAKEYAS-RNINVNAIAPGFI-ASDMTAKLGEDLEK--KIL  226 (269)
Q Consensus       170 -------------------~~~~~~Y~~sK~al~~~~~~la~e~~~-~gi~v~~v~pG~v-~t~~~~~~~~~~~~--~~~  226 (269)
                                         .++...|++||+|+..+++.+++++.+ .||+|++|+||+| .|++.....+....  ...
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~~~~~~~  239 (308)
T PLN00015        160 GLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRLLFPPF  239 (308)
T ss_pred             hhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHHHHHHHHHH
Confidence                               124567999999999999999999975 6999999999999 68886543222111  011


Q ss_pred             hcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEEEecCC
Q 024338          227 EKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGG  266 (269)
Q Consensus       227 ~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg  266 (269)
                      ...+.+++.+|++.|+.+++++++ ...+.+|+++..||+
T Consensus       240 ~~~~~~~~~~pe~~a~~~~~l~~~-~~~~~~G~~~~~~g~  278 (308)
T PLN00015        240 QKYITKGYVSEEEAGKRLAQVVSD-PSLTKSGVYWSWNGG  278 (308)
T ss_pred             HHHHhcccccHHHhhhhhhhhccc-cccCCCccccccCCc
Confidence            233445567999999999999965 445689999998875

>PRK07832 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-36  Score=255.53  Aligned_cols=238  Identities=25%  Similarity=0.362  Sum_probs=202.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCc-EEEEEccCCCHHHHHHHHHHHHHhcCCc
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQ-ALTFGGDVSKEADVESMIKTAVDAWGTV  105 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~-~~~~~~Dls~~~~~~~~~~~~~~~~~~i  105 (269)
                      |+++||||++|||.++++.|+++|++|++ ++|+.+.++++.+++...+.. ..++.+|++|.++++++++++.+.++++
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFL-TDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSM   79 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            57999999999999999999999999877 588888888887777665444 4557899999999999999999999999


Q ss_pred             cEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCCeEEEEcCCccccCCCCChhhHHhHHHHH
Q 024338          106 DILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKK-KKGRIINIASVVGLVGNIGQANYSAAKAGVI  184 (269)
Q Consensus       106 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~  184 (269)
                      |++|||+|.....++.+.+.++++..+++|+.+++.++++++|.|.++ ..++||++||..+..+.++...|+++|+++.
T Consensus        80 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~  159 (272)
T PRK07832         80 DVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKFGLR  159 (272)
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCCCCcchHHHHHHHH
Confidence            999999998766778889999999999999999999999999999764 4689999999999999999999999999999


Q ss_pred             HHHHHHHHHhccCCeEEEEEecCCccCCcccccC-------hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCcc
Q 024338          185 GLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG-------EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYIT  257 (269)
Q Consensus       185 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~  257 (269)
                      +|+++++.|+.+.||+|+.|+||+++|++.....       +...+.... ...++..+|+++|+.+++++.  ...+++
T Consensus       160 ~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~vA~~~~~~~~--~~~~~~  236 (272)
T PRK07832        160 GLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVD-RFRGHAVTPEKAAEKILAGVE--KNRYLV  236 (272)
T ss_pred             HHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHH-hcccCCCCHHHHHHHHHHHHh--cCCeEE
Confidence            9999999999999999999999999999765421       111111111 123456799999999999994  345788


Q ss_pred             ccEEEecCCcc
Q 024338          258 GQVLTIDGGMV  268 (269)
Q Consensus       258 G~~i~~dgg~~  268 (269)
                      ++.+.+++|++
T Consensus       237 ~~~~~~~~~~~  247 (272)
T PRK07832        237 YTSPDIRALYW  247 (272)
T ss_pred             ecCcchHHHHH
Confidence            88888887754

>PRK07577 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.2e-36  Score=247.86  Aligned_cols=229  Identities=37%  Similarity=0.549  Sum_probs=195.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      .+|+++||||+++||++++++|+++|++|+++ .|+.+..      .     ...++.+|++|.++++++++++.+.+ +
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~-~r~~~~~------~-----~~~~~~~D~~~~~~~~~~~~~~~~~~-~   68 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGI-ARSAIDD------F-----PGELFACDLADIEQTAATLAQINEIH-P   68 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEE-eCCcccc------c-----CceEEEeeCCCHHHHHHHHHHHHHhC-C
Confidence            57999999999999999999999999999885 5654320      0     12468999999999999999998876 6


Q ss_pred             ccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHHH
Q 024338          105 VDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVI  184 (269)
Q Consensus       105 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~  184 (269)
                      +|++|||+|.....++.+.+.+++++.+++|+.+++.+.+.++|.|++++.++||++||.. ..+.++...|+++|++++
T Consensus        69 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~-~~~~~~~~~Y~~sK~a~~  147 (234)
T PRK07577         69 VDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRA-IFGALDRTSYSAAKSALV  147 (234)
T ss_pred             CcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcccc-ccCCCCchHHHHHHHHHH
Confidence            8999999998877778888999999999999999999999999999887789999999985 457788899999999999


Q ss_pred             HHHHHHHHHhccCCeEEEEEecCCccCCcccccC---hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEE
Q 024338          185 GLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG---EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL  261 (269)
Q Consensus       185 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i  261 (269)
                      .++++++.|+++.||++++|+||+++|++.....   +..........+.++...|+|+|.++++|++ +...+++|+.+
T Consensus       148 ~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~-~~~~~~~g~~~  226 (234)
T PRK07577        148 GCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIPMRRLGTPEEVAAAIAFLLS-DDAGFITGQVL  226 (234)
T ss_pred             HHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcCCCCCCcCHHHHHHHHHHHhC-cccCCccceEE
Confidence            9999999999999999999999999999865322   2222334455677778899999999999994 45668999999


Q ss_pred             EecCCcc
Q 024338          262 TIDGGMV  268 (269)
Q Consensus       262 ~~dgg~~  268 (269)
                      .+|||..
T Consensus       227 ~~~g~~~  233 (234)
T PRK07577        227 GVDGGGS  233 (234)
T ss_pred             EecCCcc
Confidence            9999864

>PRK05866 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.3e-36  Score=255.45  Aligned_cols=238  Identities=24%  Similarity=0.319  Sum_probs=197.7

Q ss_pred             ccchhhhhhhhhhhc--ccccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEE
Q 024338            3 HAGIRAQVATIEQAT--NEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALT   80 (269)
Q Consensus         3 ~~~~~~~~~~~~~~~--~~~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~   80 (269)
                      |.++..+..+.+..+  ....+.+++|+++||||++|||+++|+.|+++|++|++ .+|+.+.++++.+++...+.++.+
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~-~~R~~~~l~~~~~~l~~~~~~~~~   93 (293)
T PRK05866         15 LAGMRPPISPQLLINRPPRQPVDLTGKRILLTGASSGIGEAAAEQFARRGATVVA-VARREDLLDAVADRITRAGGDAMA   93 (293)
T ss_pred             HhccCCCCCchhhcCCCCCCCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHHHhcCCcEEE
Confidence            344444444444442  22346788999999999999999999999999999888 588888888888888766677889


Q ss_pred             EEccCCCHHHHHHHHHHHHHhcCCccEEEEccCCCCCCcccCC--CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeE
Q 024338           81 FGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRM--KKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRI  158 (269)
Q Consensus        81 ~~~Dls~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~i  158 (269)
                      +.+|++|.++++++++++.+.++++|++|||||.....++.+.  +.++++..+++|+.+++.++++++|.|.+++.++|
T Consensus        94 ~~~Dl~d~~~v~~~~~~~~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~i  173 (293)
T PRK05866         94 VPCDLSDLDAVDALVADVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHI  173 (293)
T ss_pred             EEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEE
Confidence            9999999999999999999999999999999998766555443  45788999999999999999999999988888999


Q ss_pred             EEEcCCcccc-CCCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCH
Q 024338          159 INIASVVGLV-GNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQP  237 (269)
Q Consensus       159 v~isS~~~~~-~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (269)
                      |++||..+.. +.++...|++||+++++|+++++.|+++.||+|++|+||+++|++......      ....   ...+|
T Consensus       174 v~isS~~~~~~~~p~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~~~------~~~~---~~~~p  244 (293)
T PRK05866        174 INVATWGVLSEASPLFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPTKA------YDGL---PALTA  244 (293)
T ss_pred             EEECChhhcCCCCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCcccccccc------ccCC---CCCCH
Confidence            9999987665 367888999999999999999999999999999999999999998653211      0011   13589


Q ss_pred             HHHHHHHHHhccC
Q 024338          238 EEVAGLVEFLALN  250 (269)
Q Consensus       238 ~~~a~~~~~l~~~  250 (269)
                      +++|+.++..+..
T Consensus       245 e~vA~~~~~~~~~  257 (293)
T PRK05866        245 DEAAEWMVTAART  257 (293)
T ss_pred             HHHHHHHHHHHhc
Confidence            9999999998854

>PRK12829 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-35  Score=249.47  Aligned_cols=245  Identities=36%  Similarity=0.581  Sum_probs=208.8

Q ss_pred             ccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHH
Q 024338           20 AAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAV   99 (269)
Q Consensus        20 ~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~   99 (269)
                      ++..+++|++|||||+++||++++++|+++|++|++ ..|+++..+++.++...  .++.++.+|++|+++++++++++.
T Consensus         5 ~~~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~-~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~   81 (264)
T PRK12829          5 LLKPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHV-CDVSEAALAATAARLPG--AKVTATVADVADPAQVERVFDTAV   81 (264)
T ss_pred             HhhccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHhc--CceEEEEccCCCHHHHHHHHHHHH
Confidence            456688999999999999999999999999999877 57887777666655532  267889999999999999999999


Q ss_pred             HhcCCccEEEEccCCC-CCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC-CeEEEEcCCccccCCCCChhhH
Q 024338          100 DAWGTVDILINNAGIT-RDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKK-GRIINIASVVGLVGNIGQANYS  177 (269)
Q Consensus       100 ~~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-~~iv~isS~~~~~~~~~~~~Y~  177 (269)
                      +.++++|+|||++|.. ....+...+.+++++.++.|+.+++.+++.+++.+...+. ++++++||..+..+.++...|+
T Consensus        82 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~~~~y~  161 (264)
T PRK12829         82 ERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPGRTPYA  161 (264)
T ss_pred             HHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCCCchhH
Confidence            9999999999999987 4556777889999999999999999999999998876655 7899999999988999999999


Q ss_pred             HhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccCh-----------HHHHHHHhcCCCCCCCCHHHHHHHHHH
Q 024338          178 AAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGE-----------DLEKKILEKIPLGRYGQPEEVAGLVEF  246 (269)
Q Consensus       178 ~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~a~~~~~  246 (269)
                      .+|++++.++++++.++...+++++++.||+++|++......           ..........+.+++.+++++|+++.+
T Consensus       162 ~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~  241 (264)
T PRK12829        162 ASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEPEDIAATALF  241 (264)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence            999999999999999998889999999999999987543321           122233445677778899999999999


Q ss_pred             hccCCCCCCccccEEEecCCcc
Q 024338          247 LALNPAAGYITGQVLTIDGGMV  268 (269)
Q Consensus       247 l~~~~~~~~~~G~~i~~dgg~~  268 (269)
                      +++ +....++|+.|.+|||..
T Consensus       242 l~~-~~~~~~~g~~~~i~~g~~  262 (264)
T PRK12829        242 LAS-PAARYITGQAISVDGNVE  262 (264)
T ss_pred             HcC-ccccCccCcEEEeCCCcc
Confidence            984 445578999999999964

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=100.00  E-value=3e-35  Score=247.01  Aligned_cols=242  Identities=40%  Similarity=0.568  Sum_probs=207.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTV  105 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i  105 (269)
                      +|++|||||+++||++++++|+++|++|++ +.|+.+..+++.+++...+.++.++.+|++|.++++++++++.+.++++
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   79 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVV-NDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGL   79 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            578999999999999999999999999888 5788888888887776666778899999999999999999999999999


Q ss_pred             cEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHHHH
Q 024338          106 DILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIG  185 (269)
Q Consensus       106 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~  185 (269)
                      |++|||+|.....+..+.+.++++++++.|+.+++.+++.+++.|.+.+.+++|++||..+..+.++...|+.+|++++.
T Consensus        80 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~~~~y~~sk~a~~~  159 (255)
T TIGR01963        80 DILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASPFKSAYVAAKHGLIG  159 (255)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCCCCchhHHHHHHHHH
Confidence            99999999876666677788999999999999999999999999987778899999999999999999999999999999


Q ss_pred             HHHHHHHHhccCCeEEEEEecCCccCCcccccChH-----------H-HHHHHhcCCCCCCCCHHHHHHHHHHhccCCCC
Q 024338          186 LTKTVAKEYASRNINVNAIAPGFIASDMTAKLGED-----------L-EKKILEKIPLGRYGQPEEVAGLVEFLALNPAA  253 (269)
Q Consensus       186 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~-----------~-~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~  253 (269)
                      ++++++.++.+.+|+++.++||.+.|++.......           . ........+.+.+.+++|+|+++++++++ ..
T Consensus       160 ~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~-~~  238 (255)
T TIGR01963       160 LTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDEVAETALFLASD-AA  238 (255)
T ss_pred             HHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHccCccccCcCHHHHHHHHHHHcCc-cc
Confidence            99999999988899999999999999864321110           1 11122234556678999999999999954 33


Q ss_pred             CCccccEEEecCCccC
Q 024338          254 GYITGQVLTIDGGMVM  269 (269)
Q Consensus       254 ~~~~G~~i~~dgg~~~  269 (269)
                      ...+|+++.+|||+.+
T Consensus       239 ~~~~g~~~~~~~g~~~  254 (255)
T TIGR01963       239 AGITGQAIVLDGGWTA  254 (255)
T ss_pred             cCccceEEEEcCcccc
Confidence            4579999999999863

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK08263 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.3e-35  Score=249.95  Aligned_cols=232  Identities=27%  Similarity=0.370  Sum_probs=196.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      .+|++|||||+++||++++++|+++|++|++ ..|+.+.++++.+.+   +.++.++++|++|.++++++++++.+.+++
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~-~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVA-TARDTATLADLAEKY---GDRLLPLALDVTDRAAVFAAVETAVEHFGR   77 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHhc---cCCeeEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4789999999999999999999999999887 478877766555443   456788999999999999999999999999


Q ss_pred             ccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHHH
Q 024338          105 VDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVI  184 (269)
Q Consensus       105 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~  184 (269)
                      +|++|||||.....++.+.+.+++++.+++|+.+++.+++.++|.|++++.+++|++||..+..+.++...|+.+|++++
T Consensus        78 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~  157 (275)
T PRK08263         78 LDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPMSGIYHASKWALE  157 (275)
T ss_pred             CCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCCccHHHHHHHHHH
Confidence            99999999998777888899999999999999999999999999998877889999999999999999999999999999


Q ss_pred             HHHHHHHHHhccCCeEEEEEecCCccCCcccccC---------hHHHHHHHhcCCCCCC-CCHHHHHHHHHHhccCCCCC
Q 024338          185 GLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG---------EDLEKKILEKIPLGRY-GQPEEVAGLVEFLALNPAAG  254 (269)
Q Consensus       185 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~---------~~~~~~~~~~~~~~~~-~~~~~~a~~~~~l~~~~~~~  254 (269)
                      .++++++.|+.+.||+++.++||+++|++.....         ...........+.+.+ .+|+|+++.++++++.+.  
T Consensus       158 ~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~~~~l~~~~~--  235 (275)
T PRK08263        158 GMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQWSERSVDGDPEAAAEALLKLVDAEN--  235 (275)
T ss_pred             HHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHHHHhccCCCCHHHHHHHHHHHHcCCC--
Confidence            9999999999999999999999999999863210         1111222233344555 799999999999996543  


Q ss_pred             CccccEEEe
Q 024338          255 YITGQVLTI  263 (269)
Q Consensus       255 ~~~G~~i~~  263 (269)
                       .+++++..
T Consensus       236 -~~~~~~~~  243 (275)
T PRK08263        236 -PPLRLFLG  243 (275)
T ss_pred             -CCeEEEeC
Confidence             34555543

>PRK12828 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-35  Score=244.36  Aligned_cols=237  Identities=27%  Similarity=0.412  Sum_probs=203.1

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      ++.+++|++|||||+++||++++++|+++|++|++ ..|+.+...+..+++...  ....+.+|++|.++++++++++.+
T Consensus         2 ~~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~-~~r~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~   78 (239)
T PRK12828          2 EHSLQGKVVAITGGFGGLGRATAAWLAARGARVAL-IGRGAAPLSQTLPGVPAD--ALRIGGIDLVDPQAARRAVDEVNR   78 (239)
T ss_pred             CCCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEE-EeCChHhHHHHHHHHhhc--CceEEEeecCCHHHHHHHHHHHHH
Confidence            56788999999999999999999999999999887 478777666655555433  356678999999999999999999


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhH
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                      .++++|++||++|.....++.+.+.+++++.+++|+.+++.++++++|.+.+++.+++|++||..+..+.++...|+.+|
T Consensus        79 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk  158 (239)
T PRK12828         79 QFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGPGMGAYAAAK  158 (239)
T ss_pred             HhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCCCcchhHHHH
Confidence            99999999999998766667777899999999999999999999999999877889999999999999989999999999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccE
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQV  260 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~  260 (269)
                      ++++.++++++.++.+.||+++.+.||++.|+........        ..+..+.+++|+|+++++++++ ...+++|+.
T Consensus       159 ~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~~~~--------~~~~~~~~~~dva~~~~~~l~~-~~~~~~g~~  229 (239)
T PRK12828        159 AGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRADMPD--------ADFSRWVTPEQIAAVIAFLLSD-EAQAITGAS  229 (239)
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhcCCc--------hhhhcCCCHHHHHHHHHHHhCc-ccccccceE
Confidence            9999999999999988899999999999999854322110        1123356899999999999954 445789999


Q ss_pred             EEecCCccC
Q 024338          261 LTIDGGMVM  269 (269)
Q Consensus       261 i~~dgg~~~  269 (269)
                      +.+|||.++
T Consensus       230 ~~~~g~~~~  238 (239)
T PRK12828        230 IPVDGGVAL  238 (239)
T ss_pred             EEecCCEeC
Confidence            999999864

>PRK05855 short chain dehydrogenase; Validated

Probab=100.00  E-value=2.4e-35  Score=274.88  Aligned_cols=230  Identities=28%  Similarity=0.405  Sum_probs=199.5

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      ...++++++|||||++|||++++++|+++|++|++ .+|+.+.++++.++++..+.++.++.+|++|.++++++++++.+
T Consensus       310 ~~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  388 (582)
T PRK05855        310 RGPFSGKLVVVTGAGSGIGRETALAFAREGAEVVA-SDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRA  388 (582)
T ss_pred             cccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            35678899999999999999999999999999887 58888888888888877777889999999999999999999999


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCeEEEEcCCccccCCCCChhhHHh
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK-KGRIINIASVVGLVGNIGQANYSAA  179 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~~~Y~~s  179 (269)
                      .++++|+||||||.....++.+.+.+++++.+++|+.+++.++++++|.|++++ +|+||++||.++..+.++...|++|
T Consensus       389 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~s  468 (582)
T PRK05855        389 EHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATS  468 (582)
T ss_pred             hcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCCcHHHHH
Confidence            999999999999998777888899999999999999999999999999998765 5899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC-----hHHH---HHHHhcCCCCCCCCHHHHHHHHHHhccCC
Q 024338          180 KAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG-----EDLE---KKILEKIPLGRYGQPEEVAGLVEFLALNP  251 (269)
Q Consensus       180 K~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~-----~~~~---~~~~~~~~~~~~~~~~~~a~~~~~l~~~~  251 (269)
                      |+++++|+++++.|+++.||+|++|+||+++|++.....     .+..   .......+.....+|+++|+.+++++..+
T Consensus       469 Kaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~~~~~~~  548 (582)
T PRK05855        469 KAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKLYQRRGYGPEKVAKAIVDAVKRN  548 (582)
T ss_pred             HHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhhhhhccccCCCHHHHHHHHHHHHHcC
Confidence            999999999999999999999999999999999765421     0000   11111222223458999999999999653

>PRK05650 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.7e-35  Score=248.93  Aligned_cols=223  Identities=26%  Similarity=0.452  Sum_probs=195.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCcc
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVD  106 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id  106 (269)
                      |+++||||++|||++++++|+++|++|++ ..|+.+.++++.++++..+.++.++.+|++|.++++++++++.+.++++|
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id   79 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLAL-ADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGID   79 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            57999999999999999999999999888 47888888888888877777888999999999999999999999999999


Q ss_pred             EEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHHHHH
Q 024338          107 ILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGL  186 (269)
Q Consensus       107 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~~  186 (269)
                      +||||||......+.+.+.+++++.+++|+.+++.+++.++|.|.+++.++||++||..+..+.++...|+++|+++++|
T Consensus        80 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~~  159 (270)
T PRK05650         80 VIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVAL  159 (270)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCCCchHHHHHHHHHHHH
Confidence            99999998877788889999999999999999999999999999887789999999999999999999999999999999


Q ss_pred             HHHHHHHhccCCeEEEEEecCCccCCcccccCh--HHHHHHHhcCCCCCCCCHHHHHHHHHHhccC
Q 024338          187 TKTVAKEYASRNINVNAIAPGFIASDMTAKLGE--DLEKKILEKIPLGRYGQPEEVAGLVEFLALN  250 (269)
Q Consensus       187 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~  250 (269)
                      +++++.|+.+.||+++.|+||+++|++......  ............+...+++++|+.++..+..
T Consensus       160 ~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~l~~  225 (270)
T PRK05650        160 SETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGKLLEKSPITAADIADYIYQQVAK  225 (270)
T ss_pred             HHHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHHHHHhhcCCCCHHHHHHHHHHHHhC
Confidence            999999999999999999999999998654321  1111111111222345899999999999854

>PRK05854 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-35  Score=255.12  Aligned_cols=240  Identities=22%  Similarity=0.278  Sum_probs=192.5

Q ss_pred             ccccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHc--CCcEEEEEccCCCHHHHHHHH
Q 024338           18 NEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS--GGQALTFGGDVSKEADVESMI   95 (269)
Q Consensus        18 ~~~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dls~~~~~~~~~   95 (269)
                      ..++.++++|+++||||++|||+++|++|+++|++|++ .+|+.++.++..+++...  +.++.++.+|++|.+++++++
T Consensus         6 ~~~~~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil-~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~   84 (313)
T PRK05854          6 DITVPDLSGKRAVVTGASDGLGLGLARRLAAAGAEVIL-PVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALG   84 (313)
T ss_pred             cccCcccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHH
Confidence            34457789999999999999999999999999999888 588888888888877654  346888999999999999999


Q ss_pred             HHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccC------
Q 024338           96 KTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVG------  169 (269)
Q Consensus        96 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~------  169 (269)
                      +++.+.++++|+||||||.... +..+.+.++++..+++|+.+++.+++.++|.|++. .++||++||..+..+      
T Consensus        85 ~~~~~~~~~iD~li~nAG~~~~-~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~-~~riv~vsS~~~~~~~~~~~~  162 (313)
T PRK05854         85 EQLRAEGRPIHLLINNAGVMTP-PERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG-RARVTSQSSIAARRGAINWDD  162 (313)
T ss_pred             HHHHHhCCCccEEEECCccccC-CccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC-CCCeEEEechhhcCCCcCccc
Confidence            9999999999999999998653 33456788999999999999999999999999654 689999999887653      


Q ss_pred             ------CCCChhhHHhHHHHHHHHHHHHHHh--ccCCeEEEEEecCCccCCcccccC------hHHHHHHHhcCC-CC-C
Q 024338          170 ------NIGQANYSAAKAGVIGLTKTVAKEY--ASRNINVNAIAPGFIASDMTAKLG------EDLEKKILEKIP-LG-R  233 (269)
Q Consensus       170 ------~~~~~~Y~~sK~al~~~~~~la~e~--~~~gi~v~~v~pG~v~t~~~~~~~------~~~~~~~~~~~~-~~-~  233 (269)
                            .++...|+.||.|+..|++.|+.++  ...||+|++++||+++|++.....      ..+...+..... .+ .
T Consensus       163 ~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (313)
T PRK05854        163 LNWERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLLAARPEVGRDKDTLMVRLIRSLSARGFL  242 (313)
T ss_pred             ccccccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCccccccccccchhHHHHHHHHHHhhcccc
Confidence                  2456789999999999999999864  456899999999999999864321      111111211110 01 1


Q ss_pred             CCCHHHHHHHHHHhccCCCCCCccccEEE
Q 024338          234 YGQPEEVAGLVEFLALNPAAGYITGQVLT  262 (269)
Q Consensus       234 ~~~~~~~a~~~~~l~~~~~~~~~~G~~i~  262 (269)
                      ..++++.|...++++.+++..  +|.++.
T Consensus       243 ~~~~~~ga~~~l~~a~~~~~~--~g~~~~  269 (313)
T PRK05854        243 VGTVESAILPALYAATSPDAE--GGAFYG  269 (313)
T ss_pred             cCCHHHHHHHhhheeeCCCCC--CCcEEC
Confidence            358999999999999776543  476664

>PRK09135 pteridine reductase; Provisional

Probab=100.00  E-value=1.8e-34  Score=241.39  Aligned_cols=242  Identities=37%  Similarity=0.564  Sum_probs=203.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHc-CCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS-GGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      ...+|++|||||+++||++++++|+++|++|+++.+++.+..+.+.+.+... ...+.++.+|++|.++++++++++.+.
T Consensus         3 ~~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   82 (249)
T PRK09135          3 TDSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAA   82 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3567999999999999999999999999999986544555566666666543 345788999999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKA  181 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  181 (269)
                      ++++|+||||||.....++.+.+.++++..+++|+.+++.+++++.|.+.++ .+.+++++|..+..+.++...|+.||+
T Consensus        83 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Y~~sK~  161 (249)
T PRK09135         83 FGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQ-RGAIVNITDIHAERPLKGYPVYCAAKA  161 (249)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhC-CeEEEEEeChhhcCCCCCchhHHHHHH
Confidence            9999999999998776677778889999999999999999999999988653 578999998888888889999999999


Q ss_pred             HHHHHHHHHHHHhccCCeEEEEEecCCccCCcccc-cChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccE
Q 024338          182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAK-LGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQV  260 (269)
Q Consensus       182 al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~  260 (269)
                      +++.++++++.++.+ +++++.+.||+++||.... ...........+.++.+..+++|+++++.+++..  ....+|++
T Consensus       162 ~~~~~~~~l~~~~~~-~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~--~~~~~g~~  238 (249)
T PRK09135        162 ALEMLTRSLALELAP-EVRVNAVAPGAILWPEDGNSFDEEARQAILARTPLKRIGTPEDIAEAVRFLLAD--ASFITGQI  238 (249)
T ss_pred             HHHHHHHHHHHHHCC-CCeEEEEEeccccCccccccCCHHHHHHHHhcCCcCCCcCHHHHHHHHHHHcCc--cccccCcE
Confidence            999999999999865 7999999999999997643 2333334444556677778999999999888843  34679999


Q ss_pred             EEecCCcc
Q 024338          261 LTIDGGMV  268 (269)
Q Consensus       261 i~~dgg~~  268 (269)
                      +.+|+|..
T Consensus       239 ~~i~~g~~  246 (249)
T PRK09135        239 LAVDGGRS  246 (249)
T ss_pred             EEECCCee
Confidence            99999863

>PRK07775 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-34  Score=246.15  Aligned_cols=229  Identities=27%  Similarity=0.404  Sum_probs=195.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      ....|+++||||+++||++++++|+++|++|+++ .|+.+.++++.+++...+.++.++.+|++|.++++++++++.+.+
T Consensus         7 ~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   85 (274)
T PRK07775          7 HPDRRPALVAGASSGIGAATAIELAAAGFPVALG-ARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEAL   85 (274)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEE-eCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            4567899999999999999999999999998874 677777777777776666778889999999999999999999999


Q ss_pred             CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHH
Q 024338          103 GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAG  182 (269)
Q Consensus       103 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  182 (269)
                      +++|++|||||.....+..+.+.+.+++.+++|+.+++.+++.++|.|.+++.++||++||..+..+.++...|+.+|++
T Consensus        86 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  165 (274)
T PRK07775         86 GEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRPHMGAYGAAKAG  165 (274)
T ss_pred             CCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCcchHHHHHHH
Confidence            99999999999876667778889999999999999999999999999987778899999999999998999999999999


Q ss_pred             HHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHH----HHHHHh--cCCCCCCCCHHHHHHHHHHhccCCC
Q 024338          183 VIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDL----EKKILE--KIPLGRYGQPEEVAGLVEFLALNPA  252 (269)
Q Consensus       183 l~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~----~~~~~~--~~~~~~~~~~~~~a~~~~~l~~~~~  252 (269)
                      ++.++++++.++.+.||++++++||+++|++.....+..    .+....  ....+.+.+++|+|++++++++.+.
T Consensus       166 ~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~~~~~  241 (274)
T PRK07775        166 LEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKWGQARHDYFLRASDLARAITFVAETPR  241 (274)
T ss_pred             HHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHhcccccccccCHHHHHHHHHHHhcCCC
Confidence            999999999999888999999999999998643322211    111111  1223457799999999999996553

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=100.00  E-value=6.4e-37  Score=241.51  Aligned_cols=229  Identities=34%  Similarity=0.494  Sum_probs=192.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHc--CCcEEEEEccCCCHHHHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS--GGQALTFGGDVSKEADVESMIKTAV   99 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dls~~~~~~~~~~~~~   99 (269)
                      ++++||.+++||+.+|||++++++|+++|..+++.. .+.+.. +...++++.  ...+.+++||+++..+++++++++.
T Consensus         1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~-~~~En~-~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~   78 (261)
T KOG4169|consen    1 MDLTGKNALVTGGAGGIGLATSKALLEKGIKVLVID-DSEENP-EAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKIL   78 (261)
T ss_pred             CcccCceEEEecCCchhhHHHHHHHHHcCchheeeh-hhhhCH-HHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHH
Confidence            478899999999999999999999999999988753 333333 334455543  4568899999999999999999999


Q ss_pred             HhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC---CCeEEEEcCCccccCCCCChhh
Q 024338          100 DAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK---KGRIINIASVVGLVGNIGQANY  176 (269)
Q Consensus       100 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~~~iv~isS~~~~~~~~~~~~Y  176 (269)
                      .++|.||++||+||+..+        .+|++.+.+|+.|..+-+...+|+|.++.   +|-|||+||..|..|.|-.+.|
T Consensus        79 ~~fg~iDIlINgAGi~~d--------kd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pVY  150 (261)
T KOG4169|consen   79 ATFGTIDILINGAGILDD--------KDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPVY  150 (261)
T ss_pred             HHhCceEEEEcccccccc--------hhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccchhh
Confidence            999999999999998754        47999999999999999999999997654   5789999999999999999999


Q ss_pred             HHhHHHHHHHHHHHHHH--hccCCeEEEEEecCCccCCcccccC--------hHHHHHHHhcCCCCCCCCHHHHHHHHHH
Q 024338          177 SAAKAGVIGLTKTVAKE--YASRNINVNAIAPGFIASDMTAKLG--------EDLEKKILEKIPLGRYGQPEEVAGLVEF  246 (269)
Q Consensus       177 ~~sK~al~~~~~~la~e--~~~~gi~v~~v~pG~v~t~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~a~~~~~  246 (269)
                      ++||+++-+|+||+|..  |.+.||++++||||++.|.+...+.        ++......+..+   .++|.+++..++.
T Consensus       151 ~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~~~l~~~~---~q~~~~~a~~~v~  227 (261)
T KOG4169|consen  151 AASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDASGGYLEYSDSIKEALERAP---KQSPACCAINIVN  227 (261)
T ss_pred             hhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHhcCCcccccHHHHHHHHHcc---cCCHHHHHHHHHH
Confidence            99999999999999875  5677999999999999998765542        122233333333   5589999999999


Q ss_pred             hccCCCCCCccccEEEecCCc
Q 024338          247 LALNPAAGYITGQVLTIDGGM  267 (269)
Q Consensus       247 l~~~~~~~~~~G~~i~~dgg~  267 (269)
                      +.+.    ..+|+...+|.|.
T Consensus       228 aiE~----~~NGaiw~v~~g~  244 (261)
T KOG4169|consen  228 AIEY----PKNGAIWKVDSGS  244 (261)
T ss_pred             HHhh----ccCCcEEEEecCc
Confidence            9854    4789999999885

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=100.00  E-value=1.3e-34  Score=242.83  Aligned_cols=241  Identities=49%  Similarity=0.773  Sum_probs=199.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHH-HHHHHHHHHHHcC-CcEEEEEccCCC-HHHHHHHHHHHH
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSK-EAEEVCKEIEASG-GQALTFGGDVSK-EADVESMIKTAV   99 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~-~~~~~~~~l~~~~-~~~~~~~~Dls~-~~~~~~~~~~~~   99 (269)
                      .+.+|++|||||++|||+++|+.|+++|+.+++..++... ..+++.+.....+ ....+..+|+++ .++++.+++++.
T Consensus         2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~   81 (251)
T COG1028           2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAE   81 (251)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHH
Confidence            5679999999999999999999999999998886555443 2344444333112 367788899998 999999999999


Q ss_pred             HhcCCccEEEEccCCCCC-CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCC-hhhH
Q 024338          100 DAWGTVDILINNAGITRD-TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQ-ANYS  177 (269)
Q Consensus       100 ~~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~-~~Y~  177 (269)
                      +.+|++|++|||||.... .++.+.+.+++++.+++|+.+++.+++.+.|.+.++   +||++||..+. +.++. ..|+
T Consensus        82 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~---~Iv~isS~~~~-~~~~~~~~Y~  157 (251)
T COG1028          82 EEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQ---RIVNISSVAGL-GGPPGQAAYA  157 (251)
T ss_pred             HHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhC---eEEEECCchhc-CCCCCcchHH
Confidence            999999999999999877 488899999999999999999999999888888733   99999999999 88874 9999


Q ss_pred             HhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHH---HHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCC
Q 024338          178 AAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDL---EKKILEKIPLGRYGQPEEVAGLVEFLALNPAAG  254 (269)
Q Consensus       178 ~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~  254 (269)
                      +||+|+++|+++++.|+.+.||++++|+||+++|++........   ........+.++...|+++++.+.++.......
T Consensus       158 ~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (251)
T COG1028         158 ASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPMTAALESAELEALKRLAARIPLGRLGTPEEVAAAVAFLASDEAAS  237 (251)
T ss_pred             HHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcchhhhhhhhhhHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcchhc
Confidence            99999999999999999999999999999999999876543322   122222225556778999999999998554466


Q ss_pred             CccccEEEecCCc
Q 024338          255 YITGQVLTIDGGM  267 (269)
Q Consensus       255 ~~~G~~i~~dgg~  267 (269)
                      +.+|+.+.+|||+
T Consensus       238 ~~~g~~~~~~~~~  250 (251)
T COG1028         238 YITGQTLPVDGGL  250 (251)
T ss_pred             cccCCEEEeCCCC
Confidence            8999999999986

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=9.3e-35  Score=242.11  Aligned_cols=224  Identities=37%  Similarity=0.582  Sum_probs=196.5

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      +.++++|+++|||++++||.+++++|+++|++|++ +.|+.+..+++.+++...+.++.++.+|+++.++++++++++.+
T Consensus         2 ~~~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~-~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (239)
T PRK07666          2 AQSLQGKNALITGAGRGIGRAVAIALAKEGVNVGL-LARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKN   80 (239)
T ss_pred             CccCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            34577899999999999999999999999999888 58888888777777766667888999999999999999999999


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhH
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                      +++++|++|||+|......+.+.+.+++++.+++|+.+++.+++.+.|.+.+++.+++|++||..+..+.++...|+.+|
T Consensus        81 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK  160 (239)
T PRK07666         81 ELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAVTSAYSASK  160 (239)
T ss_pred             HcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCCCCcchHHHH
Confidence            99999999999998766677788999999999999999999999999999888889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCC
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPA  252 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~  252 (269)
                      ++++.++++++.|+.+.||+++.|+||++.|++.......      ...+ ....+++++|+.+..+++.+.
T Consensus       161 ~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~------~~~~-~~~~~~~~~a~~~~~~l~~~~  225 (239)
T PRK07666        161 FGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDLGLT------DGNP-DKVMQPEDLAEFIVAQLKLNK  225 (239)
T ss_pred             HHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhcccc------ccCC-CCCCCHHHHHHHHHHHHhCCC
Confidence            9999999999999999999999999999999975432110      1111 234689999999999996653

>PRK06196 oxidoreductase; Provisional

Probab=100.00  E-value=4.3e-35  Score=253.93  Aligned_cols=235  Identities=21%  Similarity=0.261  Sum_probs=188.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      .++++|+++||||++|||++++++|+++|++|++ ..|+.+..++..+++.    ++.++.+|++|.++++++++++.+.
T Consensus        22 ~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~-~~R~~~~~~~~~~~l~----~v~~~~~Dl~d~~~v~~~~~~~~~~   96 (315)
T PRK06196         22 HDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIV-PARRPDVAREALAGID----GVEVVMLDLADLESVRAFAERFLDS   96 (315)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHhh----hCeEEEccCCCHHHHHHHHHHHHhc
Confidence            4568999999999999999999999999999888 5788877777666653    3678999999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcccc------------C
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLV------------G  169 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~------------~  169 (269)
                      ++++|+||||||....  ..+.+.++++..+++|+.+++.+++.++|.|.+++.++||++||..+..            +
T Consensus        97 ~~~iD~li~nAg~~~~--~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~  174 (315)
T PRK06196         97 GRRIDILINNAGVMAC--PETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRG  174 (315)
T ss_pred             CCCCCEEEECCCCCCC--CCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccCC
Confidence            9999999999997543  2345667899999999999999999999999877778999999976532            3


Q ss_pred             CCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHH---HHHHh-cCCCC-CCCCHHHHHHHH
Q 024338          170 NIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLE---KKILE-KIPLG-RYGQPEEVAGLV  244 (269)
Q Consensus       170 ~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~---~~~~~-~~~~~-~~~~~~~~a~~~  244 (269)
                      .++...|+.||++++.|++.++.++.+.||++++|+||+++|++.........   ..... ..++. ++.+|+++|..+
T Consensus       175 ~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~  254 (315)
T PRK06196        175 YDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEHGNPIDPGFKTPAQGAATQ  254 (315)
T ss_pred             CChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhhhhhhhhhhhhhhhhcCCHhHHHHHH
Confidence            34567899999999999999999999999999999999999998654432111   01110 11222 356899999999


Q ss_pred             HHhccCCCCCCccccEEEec
Q 024338          245 EFLALNPAAGYITGQVLTID  264 (269)
Q Consensus       245 ~~l~~~~~~~~~~G~~i~~d  264 (269)
                      +||+.++......| .+..|
T Consensus       255 ~~l~~~~~~~~~~g-~~~~~  273 (315)
T PRK06196        255 VWAATSPQLAGMGG-LYCED  273 (315)
T ss_pred             HHHhcCCccCCCCC-eEeCC
Confidence            99997665443334 34334

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=100.00  E-value=6.4e-35  Score=230.46  Aligned_cols=242  Identities=21%  Similarity=0.313  Sum_probs=210.2

Q ss_pred             CCCCCCEEEEeCCC--CchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGAS--RGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAV   99 (269)
Q Consensus        22 ~~~~~k~vlItGas--~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~   99 (269)
                      ..++||++||+|-.  ..|++.||+.+.++|+++..+ ..++ ++++-.+++.+.-+.-.+++||+++.++++++++++.
T Consensus         2 g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fT-y~~e-~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~   79 (259)
T COG0623           2 GLLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFT-YQGE-RLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIK   79 (259)
T ss_pred             CccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEE-eccH-HHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHH
Confidence            46899999999986  699999999999999998885 5555 3333333332222235579999999999999999999


Q ss_pred             HhcCCccEEEEccCCCCC----CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChh
Q 024338          100 DAWGTVDILINNAGITRD----TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQAN  175 (269)
Q Consensus       100 ~~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~  175 (269)
                      +++|++|+|||+.++.+.    +.+.+++.+.+...+++..++...+++++.|+|  +.+|.+|.++-..+.+..|.+-.
T Consensus        80 ~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM--~~ggSiltLtYlgs~r~vPnYNv  157 (259)
T COG0623          80 KKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLM--NNGGSILTLTYLGSERVVPNYNV  157 (259)
T ss_pred             HhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhc--CCCCcEEEEEeccceeecCCCch
Confidence            999999999999999863    567789999999999999999999999999999  66899999999999999999999


Q ss_pred             hHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC--hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCC
Q 024338          176 YSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG--EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAA  253 (269)
Q Consensus       176 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~  253 (269)
                      .+.+|++|++-+|-||.++.++|||||+|+-|+++|=..+...  ...........|+++..++|||+++.+||+ ++=+
T Consensus       158 MGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~~f~~~l~~~e~~aPl~r~vt~eeVG~tA~fLl-SdLs  236 (259)
T COG0623         158 MGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIGDFRKMLKENEANAPLRRNVTIEEVGNTAAFLL-SDLS  236 (259)
T ss_pred             hHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhccccHHHHHHHHHhhCCccCCCCHHHhhhhHHHHh-cchh
Confidence            9999999999999999999999999999999999996544432  456667777889999999999999999999 5677


Q ss_pred             CCccccEEEecCCcc
Q 024338          254 GYITGQVLTIDGGMV  268 (269)
Q Consensus       254 ~~~~G~~i~~dgg~~  268 (269)
                      +.+|||+++||+|+-
T Consensus       237 sgiTGei~yVD~G~~  251 (259)
T COG0623         237 SGITGEIIYVDSGYH  251 (259)
T ss_pred             cccccceEEEcCCce
Confidence            789999999999973

>PRK08324 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.1e-34  Score=274.23  Aligned_cols=244  Identities=33%  Similarity=0.450  Sum_probs=213.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      ..+.||++|||||+|+||+++++.|+++|++|++ .+|+.+.+++..+++... .++.++.+|++|.++++++++++.+.
T Consensus       418 ~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl-~~r~~~~~~~~~~~l~~~-~~v~~v~~Dvtd~~~v~~~~~~~~~~  495 (681)
T PRK08324        418 KPLAGKVALVTGAAGGIGKATAKRLAAEGACVVL-ADLDEEAAEAAAAELGGP-DRALGVACDVTDEAAVQAAFEEAALA  495 (681)
T ss_pred             cCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEE-EeCCHHHHHHHHHHHhcc-CcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            4568899999999999999999999999999887 578888777777766543 57888999999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC-CeEEEEcCCccccCCCCChhhHHhH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKK-GRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                      ++++|++|||||.....++.+.+.++|+..+++|+.+++.+++.+.+.|++++. ++||++||..+..+.++...|++||
T Consensus       496 ~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~~~~Y~asK  575 (681)
T PRK08324        496 FGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYGAAK  575 (681)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCCcHHHHHHH
Confidence            999999999999988888888999999999999999999999999999987664 8999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCc--cCCcccccC------------hHHHHHHHhcCCCCCCCCHHHHHHHHHH
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFI--ASDMTAKLG------------EDLEKKILEKIPLGRYGQPEEVAGLVEF  246 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v--~t~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~a~~~~~  246 (269)
                      ++++.++++++.++.+.||+++.|+||.+  .|++.....            ++..+....+.+++++.+++|+|+++++
T Consensus       576 aa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~DvA~a~~~  655 (681)
T PRK08324        576 AAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLLKREVTPEDVAEAVVF  655 (681)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhhhhhhccCChHHHHHHHHhcCCcCCccCHHHHHHHHHH
Confidence            99999999999999999999999999999  787643211            1122334556778888999999999999


Q ss_pred             hccCCCCCCccccEEEecCCcc
Q 024338          247 LALNPAAGYITGQVLTIDGGMV  268 (269)
Q Consensus       247 l~~~~~~~~~~G~~i~~dgg~~  268 (269)
                      +++ +.....+|+++.+|||..
T Consensus       656 l~s-~~~~~~tG~~i~vdgG~~  676 (681)
T PRK08324        656 LAS-GLLSKTTGAIITVDGGNA  676 (681)
T ss_pred             HhC-ccccCCcCCEEEECCCch
Confidence            984 445678999999999964

>PLN02780 ketoreductase/ oxidoreductase

Probab=100.00  E-value=2.2e-35  Score=255.73  Aligned_cols=211  Identities=27%  Similarity=0.351  Sum_probs=177.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHc--CCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS--GGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      .|++++||||++|||+++|++|+++|++|++ .+|+++.++++.+++++.  +.++..+.+|+++  ++.+.++++.+.+
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil-~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~l~~~~  128 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVL-VARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG--DIDEGVKRIKETI  128 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEE-EECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC--CcHHHHHHHHHHh
Confidence            5899999999999999999999999999888 589999999888888764  3467788999995  2334444454444


Q ss_pred             C--CccEEEEccCCCCC--CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcccc-C-CCCChhh
Q 024338          103 G--TVDILINNAGITRD--TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLV-G-NIGQANY  176 (269)
Q Consensus       103 ~--~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~-~-~~~~~~Y  176 (269)
                      +  ++|++|||||....  .++.+.+.+++++.+++|+.+++.+++.++|.|.+++.|+||++||..+.. + .|....|
T Consensus       129 ~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~p~~~~Y  208 (320)
T PLN02780        129 EGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSDPLYAVY  208 (320)
T ss_pred             cCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCccchHH
Confidence            4  46699999998643  457788999999999999999999999999999888889999999999875 3 5889999


Q ss_pred             HHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhcc
Q 024338          177 SAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLAL  249 (269)
Q Consensus       177 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~  249 (269)
                      ++||+++++|+++++.|+++.||+|++|+||+++|++......        ..   ...+|+++|+.++....
T Consensus       209 ~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~~~~--------~~---~~~~p~~~A~~~~~~~~  270 (320)
T PLN02780        209 AATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASIRRS--------SF---LVPSSDGYARAALRWVG  270 (320)
T ss_pred             HHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCcccccCC--------CC---CCCCHHHHHHHHHHHhC
Confidence            9999999999999999999999999999999999998652110        00   13489999999998873

>PRK06180 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-34  Score=245.93  Aligned_cols=223  Identities=25%  Similarity=0.339  Sum_probs=189.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      .+|++|||||+||||++++++|+++|++|++ +.|+.+.++++.+.   .+.++..+.+|++|.+++.++++++.+.+++
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~-~~r~~~~~~~l~~~---~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~   78 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVG-TVRSEAARADFEAL---HPDRALARLLDVTDFDAIDAVVADAEATFGP   78 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEE-EeCCHHHHHHHHhh---cCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            4689999999999999999999999999888 47877766554432   2456888999999999999999999999999


Q ss_pred             ccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHHH
Q 024338          105 VDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVI  184 (269)
Q Consensus       105 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~  184 (269)
                      +|+||||||.....++.+.+.+++++.+++|+.+++.++++++|.|++++.++||++||..+..+.++...|+++|++++
T Consensus        79 ~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~~~~~Y~~sK~a~~  158 (277)
T PRK06180         79 IDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMPGIGYYCGSKFALE  158 (277)
T ss_pred             CCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCCCcchhHHHHHHHH
Confidence            99999999987777888899999999999999999999999999998877889999999999999999999999999999


Q ss_pred             HHHHHHHHHhccCCeEEEEEecCCccCCcccccC-------hHH---HH---HHHhcCCCCCCCCHHHHHHHHHHhccCC
Q 024338          185 GLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG-------EDL---EK---KILEKIPLGRYGQPEEVAGLVEFLALNP  251 (269)
Q Consensus       185 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~-------~~~---~~---~~~~~~~~~~~~~~~~~a~~~~~l~~~~  251 (269)
                      .++++++.|+.+.|+++++|+||+++|++.....       ++.   ..   ......+..++.+|+++|+++++++..+
T Consensus       159 ~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~l~~~  238 (277)
T PRK06180        159 GISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSGKQPGDPAKAAQAILAAVESD  238 (277)
T ss_pred             HHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHcCC
Confidence            9999999999999999999999999998643211       111   11   1111223345678999999999998644

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.4e-34  Score=242.16  Aligned_cols=233  Identities=26%  Similarity=0.425  Sum_probs=200.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcC-CcEEEEEccCC--CHHHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASG-GQALTFGGDVS--KEADVESMIKTA   98 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dls--~~~~~~~~~~~~   98 (269)
                      ..+++|+++||||+++||.+++++|+++|++|++ .+|+.+..+++.+++++.+ .++.++.+|++  +.++++++++++
T Consensus         8 ~~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~-~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~   86 (247)
T PRK08945          8 DLLKDRIILVTGAGDGIGREAALTYARHGATVIL-LGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTI   86 (247)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEE-EeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHH
Confidence            4568999999999999999999999999999988 5788888877877776643 45677778886  889999999999


Q ss_pred             HHhcCCccEEEEccCCCCC-CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhH
Q 024338           99 VDAWGTVDILINNAGITRD-TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYS  177 (269)
Q Consensus        99 ~~~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~  177 (269)
                      .+.++++|+||||||.... .++.+.+.+.+++.+++|+.+++.++++++|+|.+++.++||++||..+..+.+++..|+
T Consensus        87 ~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~  166 (247)
T PRK08945         87 EEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRANWGAYA  166 (247)
T ss_pred             HHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCCCCcccH
Confidence            9999999999999997543 466778889999999999999999999999999888889999999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCcc
Q 024338          178 AAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYIT  257 (269)
Q Consensus       178 ~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~  257 (269)
                      +||++++.++++++.++...||++++++||.++|++.....+..        ...++.+|+++++.++|++ ++...+++
T Consensus       167 ~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~-~~~~~~~~  237 (247)
T PRK08945        167 VSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASAFPGE--------DPQKLKTPEDIMPLYLYLM-GDDSRRKN  237 (247)
T ss_pred             HHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhhcCcc--------cccCCCCHHHHHHHHHHHh-CccccccC
Confidence            99999999999999999999999999999999998643322111        1234568999999999998 56667999


Q ss_pred             ccEEEec
Q 024338          258 GQVLTID  264 (269)
Q Consensus       258 G~~i~~d  264 (269)
                      |+++..-
T Consensus       238 g~~~~~~  244 (247)
T PRK08945        238 GQSFDAQ  244 (247)
T ss_pred             CeEEeCC
Confidence            9997653

>PRK06197 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.1e-35  Score=252.02  Aligned_cols=241  Identities=23%  Similarity=0.261  Sum_probs=193.5

Q ss_pred             ccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHc--CCcEEEEEccCCCHHHHHHHHHH
Q 024338           20 AAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS--GGQALTFGGDVSKEADVESMIKT   97 (269)
Q Consensus        20 ~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dls~~~~~~~~~~~   97 (269)
                      ..+++++|+++||||++|||.++|++|+++|++|++ ..|+.+..++..+++...  +.++.++.+|++|.+++++++++
T Consensus        10 ~~~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~-~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~   88 (306)
T PRK06197         10 DIPDQSGRVAVVTGANTGLGYETAAALAAKGAHVVL-AVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADA   88 (306)
T ss_pred             ccccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHH
Confidence            357889999999999999999999999999999887 578887777766666543  35688899999999999999999


Q ss_pred             HHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcccc---------
Q 024338           98 AVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLV---------  168 (269)
Q Consensus        98 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~---------  168 (269)
                      +.++++++|+||||||.....  ...+.++++..+++|+.+++.+++.++|.|++.+.++||++||..+..         
T Consensus        89 ~~~~~~~iD~li~nAg~~~~~--~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~  166 (306)
T PRK06197         89 LRAAYPRIDLLINNAGVMYTP--KQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDL  166 (306)
T ss_pred             HHhhCCCCCEEEECCccccCC--CccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCcccc
Confidence            999999999999999976432  346677899999999999999999999999877778999999987543         


Q ss_pred             ----CCCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEE--ecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHH
Q 024338          169 ----GNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAI--APGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAG  242 (269)
Q Consensus       169 ----~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v--~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~  242 (269)
                          +.++...|+.||++++.|+++++.++++.|++++++  +||+++|++.+..............+. ...++++.+.
T Consensus       167 ~~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~  245 (306)
T PRK06197        167 QWERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARNLPRALRPVATVLAPL-LAQSPEMGAL  245 (306)
T ss_pred             CcccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccccCcHHHHHHHHHHHhh-hcCCHHHHHH
Confidence                234567899999999999999999998888777655  799999998776543222111111111 1347888898


Q ss_pred             HHHHhccCCCCCCccccEEEecCC
Q 024338          243 LVEFLALNPAAGYITGQVLTIDGG  266 (269)
Q Consensus       243 ~~~~l~~~~~~~~~~G~~i~~dgg  266 (269)
                      ..++++.++  +..+|..+..||+
T Consensus       246 ~~~~~~~~~--~~~~g~~~~~~~~  267 (306)
T PRK06197        246 PTLRAATDP--AVRGGQYYGPDGF  267 (306)
T ss_pred             HHHHHhcCC--CcCCCeEEccCcc
Confidence            888888544  3467888887764

>PRK07041 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.6e-35  Score=240.59  Aligned_cols=224  Identities=26%  Similarity=0.421  Sum_probs=190.6

Q ss_pred             EEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCccEEE
Q 024338           30 VVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILI  109 (269)
Q Consensus        30 lItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li  109 (269)
                      |||||+++||++++++|+++|++|++ ..|+.+..+++.+++++ +.++.++.+|++|.+++++++++    .+++|++|
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~-~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~----~~~id~li   74 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTI-ASRSRDRLAAAARALGG-GAPVRTAALDITDEAAVDAFFAE----AGPFDHVV   74 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHhc-CCceEEEEccCCCHHHHHHHHHh----cCCCCEEE
Confidence            69999999999999999999999887 47887777776666642 56788899999999999998875    37899999


Q ss_pred             EccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHHHHHHHH
Q 024338          110 NNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKT  189 (269)
Q Consensus       110 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~~~  189 (269)
                      ||+|.....++.+.+.+++++.+++|+.+++.+.+  .+.+  ++.++||++||..+..+.++...|+++|+++++++++
T Consensus        75 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~--~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~  150 (230)
T PRK07041         75 ITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVAR--AARI--APGGSLTFVSGFAAVRPSASGVLQGAINAALEALARG  150 (230)
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHh--hhhh--cCCeEEEEECchhhcCCCCcchHHHHHHHHHHHHHHH
Confidence            99998777777788999999999999999999999  4444  4568999999999999999999999999999999999


Q ss_pred             HHHHhccCCeEEEEEecCCccCCcccccC----hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEEEecC
Q 024338          190 VAKEYASRNINVNAIAPGFIASDMTAKLG----EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDG  265 (269)
Q Consensus       190 la~e~~~~gi~v~~v~pG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dg  265 (269)
                      ++.|+.+  |+++.++||+++|++.....    ...........+.++...|+|+|+++++|+++   .+++|+++.+||
T Consensus       151 la~e~~~--irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~---~~~~G~~~~v~g  225 (230)
T PRK07041        151 LALELAP--VRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPARRVGQPEDVANAILFLAAN---GFTTGSTVLVDG  225 (230)
T ss_pred             HHHHhhC--ceEEEEeecccccHHHHhhhccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcC---CCcCCcEEEeCC
Confidence            9999975  99999999999999754322    12233344556777788999999999999953   478999999999


Q ss_pred             Ccc
Q 024338          266 GMV  268 (269)
Q Consensus       266 g~~  268 (269)
                      |..
T Consensus       226 g~~  228 (230)
T PRK07041        226 GHA  228 (230)
T ss_pred             Cee
Confidence            975

>PRK05993 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.4e-35  Score=248.46  Aligned_cols=219  Identities=22%  Similarity=0.300  Sum_probs=184.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc-CC
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW-GT  104 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~-~~  104 (269)
                      +|+++||||++|||++++++|+++|++|++ ++|+.+.++++.+      ..+.++.+|++|.++++++++++.+.+ ++
T Consensus         4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~-~~r~~~~~~~l~~------~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~   76 (277)
T PRK05993          4 KRSILITGCSSGIGAYCARALQSDGWRVFA-TCRKEEDVAALEA------EGLEAFQLDYAEPESIAALVAQVLELSGGR   76 (277)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHH------CCceEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            689999999999999999999999999888 4788766654432      246788999999999999999997766 68


Q ss_pred             ccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHHH
Q 024338          105 VDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVI  184 (269)
Q Consensus       105 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~  184 (269)
                      +|++|||||.....++.+.+.++++..+++|+.+++.+++.++|.|.+++.++||++||..+..+.++...|++||++++
T Consensus        77 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~  156 (277)
T PRK05993         77 LDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMKYRGAYNASKFAIE  156 (277)
T ss_pred             ccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCCCccchHHHHHHHHH
Confidence            99999999988778888899999999999999999999999999998888899999999999999999999999999999


Q ss_pred             HHHHHHHHHhccCCeEEEEEecCCccCCcccccChHH--------------H----HHHHh-cCCCCCCCCHHHHHHHHH
Q 024338          185 GLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDL--------------E----KKILE-KIPLGRYGQPEEVAGLVE  245 (269)
Q Consensus       185 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~--------------~----~~~~~-~~~~~~~~~~~~~a~~~~  245 (269)
                      .|+++++.|+.+.||+|++|+||+++|++.......+              .    ..... ..+.....+|+++|+.++
T Consensus       157 ~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~i~  236 (277)
T PRK05993        157 GLSLTLRMELQGSGIHVSLIEPGPIETRFRANALAAFKRWIDIENSVHRAAYQQQMARLEGGGSKSRFKLGPEAVYAVLL  236 (277)
T ss_pred             HHHHHHHHHhhhhCCEEEEEecCCccCchhhHHHHHHhhhhccccchhHHHHHHHHHHHHhhhhccccCCCHHHHHHHHH
Confidence            9999999999999999999999999999765321110              0    00111 111122358999999999


Q ss_pred             HhccCC
Q 024338          246 FLALNP  251 (269)
Q Consensus       246 ~l~~~~  251 (269)
                      ..+.++
T Consensus       237 ~a~~~~  242 (277)
T PRK05993        237 HALTAP  242 (277)
T ss_pred             HHHcCC
Confidence            998654

>PRK07024 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-34  Score=244.35  Aligned_cols=213  Identities=27%  Similarity=0.388  Sum_probs=184.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTV  105 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i  105 (269)
                      +|++|||||++|||.++++.|+++|++|++ .+|+.+.++++.++++..+ ++.++.+|++|.++++++++++.++++++
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~-~~r~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~i~~~~~~~~~~~g~i   79 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGL-VARRTDALQAFAARLPKAA-RVSVYAADVRDADALAAAAADFIAAHGLP   79 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHhcccCC-eeEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            478999999999999999999999999888 4788877777766664333 78899999999999999999999999999


Q ss_pred             cEEEEccCCCCCCcc-cCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHHH
Q 024338          106 DILINNAGITRDTLL-MRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVI  184 (269)
Q Consensus       106 d~li~~ag~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~  184 (269)
                      |++|||+|....... .+.+.++++..+++|+.+++.+++.++|.|++++.++||++||..+..+.++...|++||++++
T Consensus        80 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~  159 (257)
T PRK07024         80 DVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLPGAGAYSASKAAAI  159 (257)
T ss_pred             CEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCCcchHHHHHHHH
Confidence            999999998654333 3378899999999999999999999999998888899999999999999999999999999999


Q ss_pred             HHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccC
Q 024338          185 GLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALN  250 (269)
Q Consensus       185 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~  250 (269)
                      .|+++++.|+.+.||++++|+||+++|++.....          .+.....+|+++++.++.....
T Consensus       160 ~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~----------~~~~~~~~~~~~a~~~~~~l~~  215 (257)
T PRK07024        160 KYLESLRVELRPAGVRVVTIAPGYIRTPMTAHNP----------YPMPFLMDADRFAARAARAIAR  215 (257)
T ss_pred             HHHHHHHHHhhccCcEEEEEecCCCcCchhhcCC----------CCCCCccCHHHHHHHHHHHHhC
Confidence            9999999999999999999999999999754211          1111235899999999998854

>PRK06194 hypothetical protein; Provisional

Probab=100.00  E-value=1.1e-34  Score=248.11  Aligned_cols=227  Identities=27%  Similarity=0.399  Sum_probs=191.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      .++++|++|||||++|||++++++|+++|++|++ .+|+.+.+++..+++...+.++.++.+|++|.++++++++++.+.
T Consensus         2 ~~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~   80 (287)
T PRK06194          2 KDFAGKVAVITGAASGFGLAFARIGAALGMKLVL-ADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALER   80 (287)
T ss_pred             cCCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEE-EeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            3567899999999999999999999999999888 478887777777777665667888999999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC------CeEEEEcCCccccCCCCChh
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKK------GRIINIASVVGLVGNIGQAN  175 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~------~~iv~isS~~~~~~~~~~~~  175 (269)
                      ++++|+||||||.....++.+.+.+++++.+++|+.+++.++++++|.|.++..      +++|++||..+..+.++...
T Consensus        81 ~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~  160 (287)
T PRK06194         81 FGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMGI  160 (287)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCcc
Confidence            999999999999987777888899999999999999999999999999976544      79999999999999999999


Q ss_pred             hHHhHHHHHHHHHHHHHHhcc--CCeEEEEEecCCccCCcccccChH---------------HHHHHHhcCCCCCCCCHH
Q 024338          176 YSAAKAGVIGLTKTVAKEYAS--RNINVNAIAPGFIASDMTAKLGED---------------LEKKILEKIPLGRYGQPE  238 (269)
Q Consensus       176 Y~~sK~al~~~~~~la~e~~~--~gi~v~~v~pG~v~t~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~  238 (269)
                      |+++|++++.|+++++.++..  .+|+++.++||+++|++.......               ...............+++
T Consensus       161 Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  240 (287)
T PRK06194        161 YNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQSERNRPADLANTAPPTRSQLIAQAMSQKAVGSGKVTAE  240 (287)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccccccCchhcccCccccchhhHHHHHHHhhhhccCCCHH
Confidence            999999999999999999874  479999999999999976432110               001111111111135899


Q ss_pred             HHHHHHHHhcc
Q 024338          239 EVAGLVEFLAL  249 (269)
Q Consensus       239 ~~a~~~~~l~~  249 (269)
                      |+|+.++.+..
T Consensus       241 dva~~i~~~~~  251 (287)
T PRK06194        241 EVAQLVFDAIR  251 (287)
T ss_pred             HHHHHHHHHHH
Confidence            99999999874

>PRK09072 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-34  Score=244.80  Aligned_cols=221  Identities=26%  Similarity=0.399  Sum_probs=192.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      |++++|++|||||+++||.+++++|+++|++|++ ++|+.+.++++.+++ ..+.++.++.+|++|.++++++++.+.+ 
T Consensus         1 m~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~-~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~~-   77 (263)
T PRK09072          1 MDLKDKRVLLTGASGGIGQALAEALAAAGARLLL-VGRNAEKLEALAARL-PYPGRHRWVVADLTSEAGREAVLARARE-   77 (263)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHH-hcCCceEEEEccCCCHHHHHHHHHHHHh-
Confidence            4578999999999999999999999999999888 478888887777776 3456788999999999999999999876 


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKA  181 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  181 (269)
                      ++++|++|||||.....++.+.+.+++++.+++|+.+++.+++.++|.|.+++.+++|++||..+..+.++...|+.+|+
T Consensus        78 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  157 (263)
T PRK09072         78 MGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPGYASYCASKF  157 (263)
T ss_pred             cCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCCCccHHHHHHH
Confidence            78999999999987767788889999999999999999999999999998877899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccC
Q 024338          182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALN  250 (269)
Q Consensus       182 al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~  250 (269)
                      ++..++++++.++.+.||+|+.++||+++|++.......    ..... .....+|+++|+.+++++..
T Consensus       158 a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~----~~~~~-~~~~~~~~~va~~i~~~~~~  221 (263)
T PRK09072        158 ALRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAVQA----LNRAL-GNAMDDPEDVAAAVLQAIEK  221 (263)
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEecCcccccchhhhccc----ccccc-cCCCCCHHHHHHHHHHHHhC
Confidence            999999999999999999999999999999875432111    11111 12456899999999999954

>PRK07806 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.6e-35  Score=244.67  Aligned_cols=232  Identities=25%  Similarity=0.295  Sum_probs=188.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCC-HHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARS-SKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~-~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      ++++|+++||||++|||++++++|+++|++|+++ .|+ .+..+.+.++++..+.++.++.+|++|.++++++++++.+.
T Consensus         3 ~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~-~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (248)
T PRK07806          3 DLPGKTALVTGSSRGIGADTAKILAGAGAHVVVN-YRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREE   81 (248)
T ss_pred             CCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEE-eCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            4678999999999999999999999999998885 554 34566666677665667888999999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccc-----cCCCCChhh
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGL-----VGNIGQANY  176 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~-----~~~~~~~~Y  176 (269)
                      ++++|++|||||......      ..++..+++|+.+++.+++.+.|.|.  +.+++|++||..+.     .+.+.+..|
T Consensus        82 ~~~~d~vi~~ag~~~~~~------~~~~~~~~vn~~~~~~l~~~~~~~~~--~~~~iv~isS~~~~~~~~~~~~~~~~~Y  153 (248)
T PRK07806         82 FGGLDALVLNASGGMESG------MDEDYAMRLNRDAQRNLARAALPLMP--AGSRVVFVTSHQAHFIPTVKTMPEYEPV  153 (248)
T ss_pred             CCCCcEEEECCCCCCCCC------CCcceeeEeeeHHHHHHHHHHHhhcc--CCceEEEEeCchhhcCccccCCccccHH
Confidence            999999999998643221      12456889999999999999999884  35799999996553     233556789


Q ss_pred             HHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc----ChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCC
Q 024338          177 SAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL----GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPA  252 (269)
Q Consensus       177 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~  252 (269)
                      +.||++++.++++++.|+++.||+|++|.||++.|++....    .+....  ....|.+++.+|+|+|+++++++++  
T Consensus       154 ~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~dva~~~~~l~~~--  229 (248)
T PRK07806        154 ARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRLNPGAIE--ARREAAGKLYTVSEFAAEVARAVTA--  229 (248)
T ss_pred             HHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhccCCHHHHH--HHHhhhcccCCHHHHHHHHHHHhhc--
Confidence            99999999999999999999999999999999999865322    111111  1235667888999999999999953  


Q ss_pred             CCCccccEEEecCCcc
Q 024338          253 AGYITGQVLTIDGGMV  268 (269)
Q Consensus       253 ~~~~~G~~i~~dgg~~  268 (269)
                       .+++|++|.+|||..
T Consensus       230 -~~~~g~~~~i~~~~~  244 (248)
T PRK07806        230 -PVPSGHIEYVGGADY  244 (248)
T ss_pred             -cccCccEEEecCccc
Confidence             468999999999864

>PRK06914 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.9e-34  Score=243.86  Aligned_cols=237  Identities=26%  Similarity=0.389  Sum_probs=198.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHc--CCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS--GGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      .+|++|||||+++||.++++.|+++|++|+++ +|+.+..+++.+++...  +.++.++.+|++|.+++++ ++++.+.+
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~   79 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIAT-MRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEI   79 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCEEEEE-eCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhc
Confidence            57999999999999999999999999998884 78887777776666543  3468889999999999999 99999999


Q ss_pred             CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHH
Q 024338          103 GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAG  182 (269)
Q Consensus       103 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  182 (269)
                      +++|++|||||......+.+.+.+++++.+++|+.+++.+++.++|.|++.+.+++|++||..+..+.++...|+.+|++
T Consensus        80 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~~  159 (280)
T PRK06914         80 GRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPGLSPYVSSKYA  159 (280)
T ss_pred             CCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCCCCchhHHhHHH
Confidence            99999999999887777788899999999999999999999999999987778899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhccCCeEEEEEecCCccCCcccccCh-------------HHHHHHHh--cCCCCCCCCHHHHHHHHHHh
Q 024338          183 VIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGE-------------DLEKKILE--KIPLGRYGQPEEVAGLVEFL  247 (269)
Q Consensus       183 l~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~-------------~~~~~~~~--~~~~~~~~~~~~~a~~~~~l  247 (269)
                      ++.++++++.|+.+.||+++.++||+++|++......             ........  ..+.+++.+|+|+|++++++
T Consensus       160 ~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~  239 (280)
T PRK06914        160 LEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGSDTFGNPIDVANLIVEI  239 (280)
T ss_pred             HHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHHhhhhhccCCHHHHHHHHHHH
Confidence            9999999999999999999999999999997542110             11111111  12345567999999999999


Q ss_pred             ccCCCCCCccccEEEecCCc
Q 024338          248 ALNPAAGYITGQVLTIDGGM  267 (269)
Q Consensus       248 ~~~~~~~~~~G~~i~~dgg~  267 (269)
                      ++++..    +.++.+++++
T Consensus       240 ~~~~~~----~~~~~~~~~~  255 (280)
T PRK06914        240 AESKRP----KLRYPIGKGV  255 (280)
T ss_pred             HcCCCC----CcccccCCch
Confidence            965432    2456666554

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=100.00  E-value=8.8e-35  Score=241.64  Aligned_cols=220  Identities=23%  Similarity=0.306  Sum_probs=179.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcC--CcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAG--CKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G--~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      ++++||||++|||++++++|+++|  ..+++ ..|+...  .    .  ...++.++++|+++.++++++    .+++++
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~-~~~~~~~--~----~--~~~~~~~~~~Dls~~~~~~~~----~~~~~~   67 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHA-TYRHHKP--D----F--QHDNVQWHALDVTDEAEIKQL----SEQFTQ   67 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEE-EccCCcc--c----c--ccCceEEEEecCCCHHHHHHH----HHhcCC
Confidence            479999999999999999999986  44443 3444321  1    1  135778899999999988874    345689


Q ss_pred             ccEEEEccCCCC------CCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcccc---CCCCChh
Q 024338          105 VDILINNAGITR------DTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLV---GNIGQAN  175 (269)
Q Consensus       105 id~li~~ag~~~------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~---~~~~~~~  175 (269)
                      +|++|||||...      ..++.+.+.+.++..+++|+.+++.+++.++|.|++++.++++++||..+..   +.+++..
T Consensus        68 id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~~~~~~~~~  147 (235)
T PRK09009         68 LDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISDNRLGGWYS  147 (235)
T ss_pred             CCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccccccCCCCCcch
Confidence            999999999864      2356778889999999999999999999999999777678999999866533   3467789


Q ss_pred             hHHhHHHHHHHHHHHHHHhcc--CCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCC
Q 024338          176 YSAAKAGVIGLTKTVAKEYAS--RNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAA  253 (269)
Q Consensus       176 Y~~sK~al~~~~~~la~e~~~--~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~  253 (269)
                      |+++|++++.|+++|+.|+.+  .+|+|++|+||+++|++.....        ...+.++..+|+++|+.+++++++ ..
T Consensus       148 Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~~--------~~~~~~~~~~~~~~a~~~~~l~~~-~~  218 (235)
T PRK09009        148 YRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPFQ--------QNVPKGKLFTPEYVAQCLLGIIAN-AT  218 (235)
T ss_pred             hhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcchh--------hccccCCCCCHHHHHHHHHHHHHc-CC
Confidence            999999999999999999986  5999999999999999865421        234556677999999999999954 55


Q ss_pred             CCccccEEEecCCcc
Q 024338          254 GYITGQVLTIDGGMV  268 (269)
Q Consensus       254 ~~~~G~~i~~dgg~~  268 (269)
                      .+.+|+.+.+||||+
T Consensus       219 ~~~~g~~~~~~g~~~  233 (235)
T PRK09009        219 PAQSGSFLAYDGETL  233 (235)
T ss_pred             hhhCCcEEeeCCcCC
Confidence            688999999999985

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.1e-34  Score=247.62  Aligned_cols=239  Identities=23%  Similarity=0.340  Sum_probs=200.9

Q ss_pred             ccccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHc--CCcEEEEEccCCCHHHHHHHH
Q 024338           18 NEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS--GGQALTFGGDVSKEADVESMI   95 (269)
Q Consensus        18 ~~~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dls~~~~~~~~~   95 (269)
                      .....++.+++++|||+++|||.++|+.|+.+|++|++ ..|+.+..++..++++..  ..++.++++|++|.+++++++
T Consensus        27 ~~~~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~-~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa  105 (314)
T KOG1208|consen   27 VTHGIDLSGKVALVTGATSGIGFETARELALRGAHVVL-ACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFA  105 (314)
T ss_pred             eeccccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEE-EeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHH
Confidence            44457889999999999999999999999999999988 589998999999988764  456788999999999999999


Q ss_pred             HHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccC------
Q 024338           96 KTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVG------  169 (269)
Q Consensus        96 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~------  169 (269)
                      ++....++++|++|||||++....  ..+.|.+|..|.+|+.|++.+++.++|.|+....+|||++||..+...      
T Consensus       106 ~~~~~~~~~ldvLInNAGV~~~~~--~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~~~~~l  183 (314)
T KOG1208|consen  106 EEFKKKEGPLDVLINNAGVMAPPF--SLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKIDLKDL  183 (314)
T ss_pred             HHHHhcCCCccEEEeCcccccCCc--ccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCccchhhc
Confidence            999999999999999999986643  667789999999999999999999999998777799999999876110      


Q ss_pred             -------CCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHH
Q 024338          170 -------NIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAG  242 (269)
Q Consensus       170 -------~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~  242 (269)
                             ......|+.||.++..+++.|++.+.+ ||.+++++||.+.|+...+ .......+...+......++++.|+
T Consensus       184 ~~~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~-~V~~~~~hPG~v~t~~l~r-~~~~~~~l~~~l~~~~~ks~~~ga~  261 (314)
T KOG1208|consen  184 SGEKAKLYSSDAAYALSKLANVLLANELAKRLKK-GVTTYSVHPGVVKTTGLSR-VNLLLRLLAKKLSWPLTKSPEQGAA  261 (314)
T ss_pred             cchhccCccchhHHHHhHHHHHHHHHHHHHHhhc-CceEEEECCCcccccceec-chHHHHHHHHHHHHHhccCHHHHhh
Confidence                   223335999999999999999999988 9999999999999994333 3333333333333333358999999


Q ss_pred             HHHHhccCCCCCCccccEE
Q 024338          243 LVEFLALNPAAGYITGQVL  261 (269)
Q Consensus       243 ~~~~l~~~~~~~~~~G~~i  261 (269)
                      +.+|++.+++-...+|..+
T Consensus       262 t~~~~a~~p~~~~~sg~y~  280 (314)
T KOG1208|consen  262 TTCYAALSPELEGVSGKYF  280 (314)
T ss_pred             heehhccCccccCcccccc
Confidence            9999999998878888774

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=3.6e-36  Score=227.56  Aligned_cols=239  Identities=35%  Similarity=0.581  Sum_probs=212.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      .+|-+.||||+.+|+|++.++.|+++|+.++++ +-...+.++.++++   ++++.+.+.|++++++++.++...+.+||
T Consensus         7 ~kglvalvtggasglg~ataerlakqgasv~ll-dlp~skg~~vakel---g~~~vf~padvtsekdv~aala~ak~kfg   82 (260)
T KOG1199|consen    7 TKGLVALVTGGASGLGKATAERLAKQGASVALL-DLPQSKGADVAKEL---GGKVVFTPADVTSEKDVRAALAKAKAKFG   82 (260)
T ss_pred             hcCeeEEeecCcccccHHHHHHHHhcCceEEEE-eCCcccchHHHHHh---CCceEEeccccCcHHHHHHHHHHHHhhcc
Confidence            468899999999999999999999999999985 56666666777776   78899999999999999999999999999


Q ss_pred             CccEEEEccCCCCC------CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC------CCCeEEEEcCCccccCCC
Q 024338          104 TVDILINNAGITRD------TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKK------KKGRIINIASVVGLVGNI  171 (269)
Q Consensus       104 ~id~li~~ag~~~~------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~~~~iv~isS~~~~~~~~  171 (269)
                      ++|.+|||||+...      ..-...+.|++++.+++|+.|+|++++...-+|-++      +.|.||+..|.+++.+..
T Consensus        83 rld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~  162 (260)
T KOG1199|consen   83 RLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQT  162 (260)
T ss_pred             ceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCcc
Confidence            99999999997532      223456789999999999999999999999888542      357899999999999999


Q ss_pred             CChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCC-CCCCHHHHHHHHHHhccC
Q 024338          172 GQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLG-RYGQPEEVAGLVEFLALN  250 (269)
Q Consensus       172 ~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~a~~~~~l~~~  250 (269)
                      ++.+|++||.++-+|+--++++++..|||+++|.||.++||+....+++....+.+.+|.. ++..|.|-+..+-.+..+
T Consensus       163 gqaaysaskgaivgmtlpiardla~~gir~~tiapglf~tpllsslpekv~~fla~~ipfpsrlg~p~eyahlvqaiien  242 (260)
T KOG1199|consen  163 GQAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSSLPEKVKSFLAQLIPFPSRLGHPHEYAHLVQAIIEN  242 (260)
T ss_pred             chhhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhhhhHHHHHHHHHhCCCchhcCChHHHHHHHHHHHhC
Confidence            9999999999999999999999999999999999999999999999888888888888763 678999999999999866


Q ss_pred             CCCCCccccEEEecCCccC
Q 024338          251 PAAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       251 ~~~~~~~G~~i~~dgg~~~  269 (269)
                      +   +++||+|.+||-..|
T Consensus       243 p---~lngevir~dgalrm  258 (260)
T KOG1199|consen  243 P---YLNGEVIRFDGALRM  258 (260)
T ss_pred             c---ccCCeEEEecceecC
Confidence            5   899999999997654

>PRK06924 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-34  Score=240.99  Aligned_cols=233  Identities=25%  Similarity=0.342  Sum_probs=191.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCH-HHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC-
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSS-KEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT-  104 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~-~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~-  104 (269)
                      |+++||||++|||++++++|+++|++|+++ .|+. +.++++.+   ..+.++.++.+|++|.++++++++++.+.++. 
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~-~r~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   77 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISI-SRTENKELTKLAE---QYNSNLTFHSLDLQDVHELETNFNEILSSIQED   77 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEE-eCCchHHHHHHHh---ccCCceEEEEecCCCHHHHHHHHHHHHHhcCcc
Confidence            789999999999999999999999999885 5654 44443332   23567888999999999999999999877653 


Q ss_pred             -cc--EEEEccCCCCC-CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCCeEEEEcCCccccCCCCChhhHHh
Q 024338          105 -VD--ILINNAGITRD-TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKK-KKGRIINIASVVGLVGNIGQANYSAA  179 (269)
Q Consensus       105 -id--~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~iv~isS~~~~~~~~~~~~Y~~s  179 (269)
                       ++  ++|||+|...+ .++.+.+.+++++.+++|+.+++.+++.++|.|++. ..++||++||..+..+.++...|+++
T Consensus        78 ~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  157 (251)
T PRK06924         78 NVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFGWSAYCSS  157 (251)
T ss_pred             cCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCCCcHHHhHH
Confidence             22  89999997543 567888999999999999999999999999999764 45799999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhc--cCCeEEEEEecCCccCCcccccC----h--HHHHHHHhcCCCCCCCCHHHHHHHHHHhccCC
Q 024338          180 KAGVIGLTKTVAKEYA--SRNINVNAIAPGFIASDMTAKLG----E--DLEKKILEKIPLGRYGQPEEVAGLVEFLALNP  251 (269)
Q Consensus       180 K~al~~~~~~la~e~~--~~gi~v~~v~pG~v~t~~~~~~~----~--~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~  251 (269)
                      |++++.|++.++.|++  +.||+|++|.||+++|++.....    +  ...+......+.+++.+|+|+|+.+++|+++ 
T Consensus       158 Kaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~-  236 (251)
T PRK06924        158 KAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLKEEGKLLSPEYVAKALRNLLET-  236 (251)
T ss_pred             HHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHHhhcCCcCCHHHHHHHHHHHHhc-
Confidence            9999999999999975  46899999999999999754211    1  1122333344667788999999999999954 


Q ss_pred             CCCCccccEEEecC
Q 024338          252 AAGYITGQVLTIDG  265 (269)
Q Consensus       252 ~~~~~~G~~i~~dg  265 (269)
                      . .+++|+.+.+|+
T Consensus       237 ~-~~~~G~~~~v~~  249 (251)
T PRK06924        237 E-DFPNGEVIDIDE  249 (251)
T ss_pred             c-cCCCCCEeehhh
Confidence            2 689999999985

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=100.00  E-value=1.2e-33  Score=236.76  Aligned_cols=230  Identities=25%  Similarity=0.366  Sum_probs=187.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCcc
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVD  106 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id  106 (269)
                      ++++||||+++||.++++.|+++|++|++ ..|+++.++++.+.+   +.++.++.+|++|.++++++++++.+.++++|
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~-~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id   76 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIA-TGRRQERLQELKDEL---GDNLYIAQLDVRNRAAIEEMLASLPAEWRNID   76 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHh---ccceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            46999999999999999999999999888 478877766655544   34688899999999999999999999999999


Q ss_pred             EEEEccCCCC-CCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHHHH
Q 024338          107 ILINNAGITR-DTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIG  185 (269)
Q Consensus       107 ~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~  185 (269)
                      ++|||||... ..++.+.+.+++++++++|+.+++.+++.++|.|.+++.+++|++||..+..+.++...|+.+|++++.
T Consensus        77 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~~  156 (248)
T PRK10538         77 VLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQ  156 (248)
T ss_pred             EEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCCCCCchhHHHHHHHHH
Confidence            9999999753 346677899999999999999999999999999987778899999999999899999999999999999


Q ss_pred             HHHHHHHHhccCCeEEEEEecCCccCCccccc-ChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEE
Q 024338          186 LTKTVAKEYASRNINVNAIAPGFIASDMTAKL-GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL  261 (269)
Q Consensus       186 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i  261 (269)
                      |++.++.++.+.||+++.|.||++.|+..... ..................+|+|+|++++++++.+.. +.+++..
T Consensus       157 ~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~-~~~~~~~  232 (248)
T PRK10538        157 FSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWWVATLPAH-VNINTLE  232 (248)
T ss_pred             HHHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcHHHHHhhccccCCCCHHHHHHHHHHHhcCCCc-ccchhhc
Confidence            99999999999999999999999985543211 100001111111112235899999999999965543 4555543

>PRK07904 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5e-34  Score=239.84  Aligned_cols=214  Identities=20%  Similarity=0.241  Sum_probs=180.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcC-CcEEEEecCCHHH-HHHHHHHHHHcCC-cEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAG-CKVLVNYARSSKE-AEEVCKEIEASGG-QALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G-~~v~i~~~r~~~~-~~~~~~~l~~~~~-~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      .+|++|||||++|||+++|++|+++| ++|+++ .|+.+. ++++.++++..+. ++.++.+|++|.++++++++++.+ 
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~-~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~-   84 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLA-ALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA-   84 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEE-eCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh-
Confidence            57899999999999999999999995 888885 677665 7777787776543 788999999999999999999886 


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKA  181 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  181 (269)
                      ++++|++|||+|..........+.+...+.+++|+.+++.+++.++|.|.+++.++||++||..+..+.++...|++||+
T Consensus        85 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~~~~~~Y~~sKa  164 (253)
T PRK07904         85 GGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVRRSNFVYGSTKA  164 (253)
T ss_pred             cCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCCCCCcchHHHHH
Confidence            58999999999985432222224455667899999999999999999998888899999999999888888899999999


Q ss_pred             HHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCC
Q 024338          182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNP  251 (269)
Q Consensus       182 al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~  251 (269)
                      ++.+|+++++.|+.+.||+|++|+||+++|++.....+         .  ....+|+++|+.++..+...
T Consensus       165 a~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~~~---------~--~~~~~~~~~A~~i~~~~~~~  223 (253)
T PRK07904        165 GLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHAKE---------A--PLTVDKEDVAKLAVTAVAKG  223 (253)
T ss_pred             HHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccCCC---------C--CCCCCHHHHHHHHHHHHHcC
Confidence            99999999999999999999999999999997654321         0  11348999999999998543

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=1.4e-34  Score=224.80  Aligned_cols=186  Identities=22%  Similarity=0.300  Sum_probs=171.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      |.+.|.++|||||++|||+++|++|.+.|-.|++ ++|+++.+++...+.    ..+....||+.|.++.+++++++.+.
T Consensus         1 mk~tgnTiLITGG~sGIGl~lak~f~elgN~VIi-~gR~e~~L~e~~~~~----p~~~t~v~Dv~d~~~~~~lvewLkk~   75 (245)
T COG3967           1 MKTTGNTILITGGASGIGLALAKRFLELGNTVII-CGRNEERLAEAKAEN----PEIHTEVCDVADRDSRRELVEWLKKE   75 (245)
T ss_pred             CcccCcEEEEeCCcchhhHHHHHHHHHhCCEEEE-ecCcHHHHHHHHhcC----cchheeeecccchhhHHHHHHHHHhh
Confidence            4678999999999999999999999999999999 799999888777765    46778999999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCccc--CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHh
Q 024338          102 WGTVDILINNAGITRDTLLM--RMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAA  179 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  179 (269)
                      ++.+|+||||||+.....+.  +...+..++.+..|+.++..+++.++|.+.+++.+.||++||..++.|....+.||++
T Consensus        76 ~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~~PvYcaT  155 (245)
T COG3967          76 YPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMASTPVYCAT  155 (245)
T ss_pred             CCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcccccccchhh
Confidence            99999999999997654443  4456678999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCeEEEEEecCCccCC
Q 024338          180 KAGVIGLTKTVAKEYASRNINVNAIAPGFIASD  212 (269)
Q Consensus       180 K~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~  212 (269)
                      |+|++.|+.+|+..++..+|.|..+.|.+|+|+
T Consensus       156 KAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         156 KAAIHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             HHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence            999999999999999999999999999999997

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=100.00  E-value=1.2e-33  Score=244.58  Aligned_cols=238  Identities=18%  Similarity=0.242  Sum_probs=188.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcC-CcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAG-CKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G-~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      .+|+++||||++|||+++++.|+++| ++|++ ..|+.+..+++.+++...+.++..+.+|++|.++++++++++.+.++
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l-~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   80 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIM-ACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGR   80 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEE-EeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            37899999999999999999999999 88877 57888888777777754456778899999999999999999998889


Q ss_pred             CccEEEEccCCCCC-CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC--CCeEEEEcCCccccC-----------
Q 024338          104 TVDILINNAGITRD-TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK--KGRIINIASVVGLVG-----------  169 (269)
Q Consensus       104 ~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~iv~isS~~~~~~-----------  169 (269)
                      ++|++|||||+... .+..+.+.++++..+++|+.+++.+++.++|.|.+++  .++||++||..+...           
T Consensus        81 ~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~  160 (314)
T TIGR01289        81 PLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKAN  160 (314)
T ss_pred             CCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCccc
Confidence            99999999997543 2344678899999999999999999999999997654  489999999876421           


Q ss_pred             ----------------------CCCChhhHHhHHHHHHHHHHHHHHhc-cCCeEEEEEecCCc-cCCcccccChHHHH--
Q 024338          170 ----------------------NIGQANYSAAKAGVIGLTKTVAKEYA-SRNINVNAIAPGFI-ASDMTAKLGEDLEK--  223 (269)
Q Consensus       170 ----------------------~~~~~~Y~~sK~al~~~~~~la~e~~-~~gi~v~~v~pG~v-~t~~~~~~~~~~~~--  223 (269)
                                            .+++..|++||+|+..+++++++++. +.||+|++|+||++ .|++.+...+....  
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~~~~~~  240 (314)
T TIGR01289       161 LGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPLFRTLF  240 (314)
T ss_pred             ccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHHHHHHH
Confidence                                  12456799999999999999999985 46999999999999 69986543322110  


Q ss_pred             HHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEEEec
Q 024338          224 KILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTID  264 (269)
Q Consensus       224 ~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~d  264 (269)
                      ..........+.+|++.|+.+++++.++.. ..+|.++..+
T Consensus       241 ~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~-~~~g~~~~~~  280 (314)
T TIGR01289       241 PPFQKYITKGYVSEEEAGERLAQVVSDPKL-KKSGVYWSWG  280 (314)
T ss_pred             HHHHHHHhccccchhhhhhhhHHhhcCccc-CCCceeeecC
Confidence            011111122346899999999998865443 3577777643

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK08267 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-33  Score=237.62  Aligned_cols=219  Identities=29%  Similarity=0.381  Sum_probs=188.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh-cCCc
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA-WGTV  105 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~-~~~i  105 (269)
                      |++|||||+++||++++++|+++|++|+++ .|+.+.++++.+.+.  +.++.++.+|++|.++++++++++.+. ++++
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~-~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~i   78 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAY-DINEAGLAALAAELG--AGNAWTGALDVTDRAAWDAALADFAAATGGRL   78 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEE-eCCHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            789999999999999999999999998884 788887777766553  457889999999999999999998776 7899


Q ss_pred             cEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHHHH
Q 024338          106 DILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIG  185 (269)
Q Consensus       106 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~  185 (269)
                      |+||||||......+.+.+.++++..+++|+.+++.+++++.+.|..++.++||++||..+..+.++...|+.||++++.
T Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~~  158 (260)
T PRK08267         79 DVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPGLAVYSATKFAVRG  158 (260)
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCCchhhHHHHHHHHH
Confidence            99999999887777888899999999999999999999999999988888999999999999999999999999999999


Q ss_pred             HHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccC
Q 024338          186 LTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALN  250 (269)
Q Consensus       186 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~  250 (269)
                      |+++++.++.+.||++++|.||+++|++...............  .+...+|+++|+.++.++..
T Consensus       159 ~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~--~~~~~~~~~va~~~~~~~~~  221 (260)
T PRK08267        159 LTEALDLEWRRHGIRVADVMPLFVDTAMLDGTSNEVDAGSTKR--LGVRLTPEDVAEAVWAAVQH  221 (260)
T ss_pred             HHHHHHHHhcccCcEEEEEecCCcCCcccccccchhhhhhHhh--ccCCCCHHHHHHHHHHHHhC
Confidence            9999999999999999999999999998664211111111111  12235789999999999843

>PRK06179 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-33  Score=239.52  Aligned_cols=218  Identities=31%  Similarity=0.412  Sum_probs=186.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      ++|+++||||+++||++++++|+++|++|+++ .|+.+..+.        ..++.++++|++|.++++++++++.+.+++
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~-~r~~~~~~~--------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~   73 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGT-SRNPARAAP--------IPGVELLELDVTDDASVQAAVDEVIARAGR   73 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCChhhccc--------cCCCeeEEeecCCHHHHHHHHHHHHHhCCC
Confidence            46899999999999999999999999998884 676544321        235778999999999999999999999999


Q ss_pred             ccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHHH
Q 024338          105 VDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVI  184 (269)
Q Consensus       105 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~  184 (269)
                      +|+||||||.....++.+.+.+++++.+++|+.+++.+++.++|.|++++.++||++||..+..+.|+...|+++|++++
T Consensus        74 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~  153 (270)
T PRK06179         74 IDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAPYMALYAASKHAVE  153 (270)
T ss_pred             CCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCCCccHHHHHHHHHH
Confidence            99999999998777888899999999999999999999999999998888899999999999999999999999999999


Q ss_pred             HHHHHHHHHhccCCeEEEEEecCCccCCcccccChH---H--H----HHH--HhcCCCCCCCCHHHHHHHHHHhccCC
Q 024338          185 GLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGED---L--E----KKI--LEKIPLGRYGQPEEVAGLVEFLALNP  251 (269)
Q Consensus       185 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~---~--~----~~~--~~~~~~~~~~~~~~~a~~~~~l~~~~  251 (269)
                      .|+++++.|+++.||+++.|+||+++|++.......   .  .    ...  ....+.....+|+++|+.++.++..+
T Consensus       154 ~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~~~  231 (270)
T PRK06179        154 GYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVAKAVKKADAPEVVADTVVKAALGP  231 (270)
T ss_pred             HHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHHHHhccccCCCHHHHHHHHHHHHcCC
Confidence            999999999999999999999999999976533210   0  0    000  00113345568999999999998654

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=100.00  E-value=8e-34  Score=235.00  Aligned_cols=190  Identities=25%  Similarity=0.393  Sum_probs=173.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      .+..+|.|+|||+-+|+|+.+|++|.++|+.|++-+ ..++..+.+..+.+  .++...++.|++++++++++.+.+.+.
T Consensus        25 ~~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agc-l~~~gae~L~~~~~--s~rl~t~~LDVT~~esi~~a~~~V~~~  101 (322)
T KOG1610|consen   25 DSLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGC-LTEEGAESLRGETK--SPRLRTLQLDVTKPESVKEAAQWVKKH  101 (322)
T ss_pred             cccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEe-ecCchHHHHhhhhc--CCcceeEeeccCCHHHHHHHHHHHHHh
Confidence            456789999999999999999999999999999954 66666666666654  578888999999999999999999987


Q ss_pred             cC--CccEEEEccCCC-CCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHH
Q 024338          102 WG--TVDILINNAGIT-RDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSA  178 (269)
Q Consensus       102 ~~--~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~  178 (269)
                      .+  ++-.||||||+. ..++.+..+.++++..+++|+.|++.++++++|+++ +..|||||+||+.|..+.|..++|++
T Consensus       102 l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr-~arGRvVnvsS~~GR~~~p~~g~Y~~  180 (322)
T KOG1610|consen  102 LGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLR-RARGRVVNVSSVLGRVALPALGPYCV  180 (322)
T ss_pred             cccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHH-hccCeEEEecccccCccCcccccchh
Confidence            75  599999999976 457889999999999999999999999999999985 46799999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccc
Q 024338          179 AKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTA  215 (269)
Q Consensus       179 sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~  215 (269)
                      ||.|+++|+.++++|+.+.||.|..|.||..+|++.+
T Consensus       181 SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l~~  217 (322)
T KOG1610|consen  181 SKFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTNLAN  217 (322)
T ss_pred             hHHHHHHHHHHHHHHHHhcCcEEEEeccCccccccCC
Confidence            9999999999999999999999999999999999875

>PRK08251 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.8e-33  Score=231.68  Aligned_cols=213  Identities=28%  Similarity=0.329  Sum_probs=188.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHc--CCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS--GGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      +|+++||||++|||++++++|+++|++|++ ..|+.+..+++.+++.+.  +.++.++++|++|.++++++++++.++++
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLAL-CARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELG   80 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEE-EeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            689999999999999999999999999887 478888887777776654  45788899999999999999999999999


Q ss_pred             CccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCC-ChhhHHhHHH
Q 024338          104 TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIG-QANYSAAKAG  182 (269)
Q Consensus       104 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~-~~~Y~~sK~a  182 (269)
                      ++|++|||||+....++.+.+.+.+++.+++|+.+++.+++.++|.|.+.+.+++|++||..+..+.++ ...|+.||++
T Consensus        81 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a  160 (248)
T PRK08251         81 GLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPGVKAAYAASKAG  160 (248)
T ss_pred             CCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCCCCcccHHHHHHH
Confidence            999999999998777777888899999999999999999999999998878889999999999888875 6899999999


Q ss_pred             HHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccC
Q 024338          183 VIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALN  250 (269)
Q Consensus       183 l~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~  250 (269)
                      ++.++++++.++...||+++.|+||+++|++.+....           .....++++.|+.++..+..
T Consensus       161 ~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~-----------~~~~~~~~~~a~~i~~~~~~  217 (248)
T PRK08251        161 VASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKAKS-----------TPFMVDTETGVKALVKAIEK  217 (248)
T ss_pred             HHHHHHHHHHHhcccCcEEEEEecCcCcchhhhcccc-----------CCccCCHHHHHHHHHHHHhc
Confidence            9999999999999889999999999999997654321           01234799999999888754

>PRK06482 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-32  Score=234.13  Aligned_cols=233  Identities=24%  Similarity=0.341  Sum_probs=192.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTV  105 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i  105 (269)
                      .|++|||||+++||++++++|+++|++|++ ..|+.+..+++.++.   +.++.++.+|++|.++++++++++.+.++++
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~-~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   77 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAA-TVRRPDALDDLKARY---GDRLWVLQLDVTDSAAVRAVVDRAFAALGRI   77 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHhc---cCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            378999999999999999999999999888 477776666554443   3468889999999999999999999999999


Q ss_pred             cEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHHHH
Q 024338          106 DILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIG  185 (269)
Q Consensus       106 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~  185 (269)
                      |+||||||.....+..+.+.+++++.+++|+.+++.++++++|+|++++.++||++||..+..+.|+...|+.||++++.
T Consensus        78 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  157 (276)
T PRK06482         78 DVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHATKWGIEG  157 (276)
T ss_pred             CEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCCCCCchhHHHHHHHHH
Confidence            99999999887777788889999999999999999999999999988778999999999998888999999999999999


Q ss_pred             HHHHHHHHhccCCeEEEEEecCCccCCcccccC---------hHHHHHH---HhcCCCCCCCCHHHHHHHHHHhccCCCC
Q 024338          186 LTKTVAKEYASRNINVNAIAPGFIASDMTAKLG---------EDLEKKI---LEKIPLGRYGQPEEVAGLVEFLALNPAA  253 (269)
Q Consensus       186 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~---------~~~~~~~---~~~~~~~~~~~~~~~a~~~~~l~~~~~~  253 (269)
                      |+++++.++.+.||+++.++||.+.|++.....         ......+   ...-+.....++++++++++..+..+. 
T Consensus       158 ~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~a~~~~~~~~~-  236 (276)
T PRK06482        158 FVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGSFAIPGDPQKMVQAMIASADQTP-  236 (276)
T ss_pred             HHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhccCCCCCCHHHHHHHHHHHHcCCC-
Confidence            999999999999999999999999988643221         1111111   111122334689999999999985432 


Q ss_pred             CCccccEEEecCC
Q 024338          254 GYITGQVLTIDGG  266 (269)
Q Consensus       254 ~~~~G~~i~~dgg  266 (269)
                         .+..+.+.+|
T Consensus       237 ---~~~~~~~g~~  246 (276)
T PRK06482        237 ---APRRLTLGSD  246 (276)
T ss_pred             ---CCeEEecChH
Confidence               2455665543

>PRK05693 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.6e-33  Score=235.64  Aligned_cols=216  Identities=26%  Similarity=0.351  Sum_probs=180.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCcc
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVD  106 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id  106 (269)
                      |++|||||++|||+++++.|+++|++|+++ .|+.+..+++.    .  ..+.++.+|++|.++++++++++.+.++++|
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~-~r~~~~~~~~~----~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   74 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWAT-ARKAEDVEALA----A--AGFTAVQLDVNDGAALARLAEELEAEHGGLD   74 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEE-eCCHHHHHHHH----H--CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            789999999999999999999999999884 77766554432    2  2356789999999999999999999999999


Q ss_pred             EEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHHHHH
Q 024338          107 ILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGL  186 (269)
Q Consensus       107 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~~  186 (269)
                      ++|||||.....++.+.+.+++++.+++|+.+++.+++.++|.|.+ ..+++|++||..+..+.++...|+++|++++.|
T Consensus        75 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~  153 (274)
T PRK05693         75 VLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRR-SRGLVVNIGSVSGVLVTPFAGAYCASKAAVHAL  153 (274)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh-cCCEEEEECCccccCCCCCccHHHHHHHHHHHH
Confidence            9999999877777888899999999999999999999999999864 458999999999999999999999999999999


Q ss_pred             HHHHHHHhccCCeEEEEEecCCccCCcccccChHH-------------HHHHHh--cCCCCCCCCHHHHHHHHHHhccC
Q 024338          187 TKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDL-------------EKKILE--KIPLGRYGQPEEVAGLVEFLALN  250 (269)
Q Consensus       187 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~-------------~~~~~~--~~~~~~~~~~~~~a~~~~~l~~~  250 (269)
                      +++++.|+.+.||+|+.++||+++|++.+......             .+....  ........+|+++|+.++..+..
T Consensus       154 ~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~~~  232 (274)
T PRK05693        154 SDALRLELAPFGVQVMEVQPGAIASQFASNASREAEQLLAEQSPWWPLREHIQARARASQDNPTPAAEFARQLLAAVQQ  232 (274)
T ss_pred             HHHHHHHhhhhCeEEEEEecCccccccccccccchhhcCCCCCccHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHhC
Confidence            99999999999999999999999999765422110             000100  00112234799999999988754

>PRK06181 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.9e-33  Score=233.36  Aligned_cols=223  Identities=30%  Similarity=0.483  Sum_probs=190.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTV  105 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i  105 (269)
                      ++++|||||+++||.++++.|+++|++|+++ +|+.+..+++.++++..+.++.++.+|++|.++++++++++.++++++
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~-~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   79 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLA-ARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGI   79 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEE-eCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4789999999999999999999999998884 788777777777777767788899999999999999999999999999


Q ss_pred             cEEEEccCCCCCCcccCC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHHH
Q 024338          106 DILINNAGITRDTLLMRM-KKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVI  184 (269)
Q Consensus       106 d~li~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~  184 (269)
                      |++|||+|......+.+. +.+++++.+++|+.+++.+++.+.|.|.++ .+++|++||..+..+.++...|+.+|++++
T Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~  158 (263)
T PRK06181         80 DILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS-RGQIVVVSSLAGLTGVPTRSGYAASKHALH  158 (263)
T ss_pred             CEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCEEEEEecccccCCCCCccHHHHHHHHHH
Confidence            999999998777777777 889999999999999999999999988644 589999999999999999999999999999


Q ss_pred             HHHHHHHHHhccCCeEEEEEecCCccCCcccccChHH-HHHHHhcCCCCCCCCHHHHHHHHHHhccC
Q 024338          185 GLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDL-EKKILEKIPLGRYGQPEEVAGLVEFLALN  250 (269)
Q Consensus       185 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~a~~~~~l~~~  250 (269)
                      .++++++.++.+.|++++++.||++.|++........ ............+.+|+|+|+.++++++.
T Consensus       159 ~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~~~~~  225 (263)
T PRK06181        159 GFFDSLRIELADDGVAVTVVCPGFVATDIRKRALDGDGKPLGKSPMQESKIMSAEECAEAILPAIAR  225 (263)
T ss_pred             HHHHHHHHHhhhcCceEEEEecCccccCcchhhccccccccccccccccCCCCHHHHHHHHHHHhhC
Confidence            9999999999999999999999999999765322110 00000111123567999999999999954

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=100.00  E-value=1.8e-32  Score=238.24  Aligned_cols=238  Identities=18%  Similarity=0.182  Sum_probs=188.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      +.+++|+++||||++|||.++++.|+++|++|++ ..|+.+..+++.+++...+.++.++.+|++|.++++++++++.+.
T Consensus         2 ~~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   80 (322)
T PRK07453          2 SQDAKGTVIITGASSGVGLYAAKALAKRGWHVIM-ACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRAL   80 (322)
T ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHh
Confidence            4567999999999999999999999999999888 478888888777777544557888999999999999999998887


Q ss_pred             cCCccEEEEccCCCCC-CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC--CeEEEEcCCcccc----------
Q 024338          102 WGTVDILINNAGITRD-TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKK--GRIINIASVVGLV----------  168 (269)
Q Consensus       102 ~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~--~~iv~isS~~~~~----------  168 (269)
                      ++++|+||||||+... ....+.+.++++..+++|+.+++.+++.++|.|.+++.  ++||++||.....          
T Consensus        81 ~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~  160 (322)
T PRK07453         81 GKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIP  160 (322)
T ss_pred             CCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCC
Confidence            7889999999997543 23346688999999999999999999999999977653  6999999975432          


Q ss_pred             -------------------------CCCCChhhHHhHHHHHHHHHHHHHHhc-cCCeEEEEEecCCc-cCCcccccChH-
Q 024338          169 -------------------------GNIGQANYSAAKAGVIGLTKTVAKEYA-SRNINVNAIAPGFI-ASDMTAKLGED-  220 (269)
Q Consensus       169 -------------------------~~~~~~~Y~~sK~al~~~~~~la~e~~-~~gi~v~~v~pG~v-~t~~~~~~~~~-  220 (269)
                                               +..+...|+.||.+...|++.+++++. ..||++++++||.| .|++.+..... 
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~  240 (322)
T PRK07453        161 APADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTPLFRNTPPLF  240 (322)
T ss_pred             CccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCcccccCCHHH
Confidence                                     112346799999999999999999985 46999999999999 58876543321 


Q ss_pred             --HHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEEE
Q 024338          221 --LEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLT  262 (269)
Q Consensus       221 --~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~  262 (269)
                        +...+. ........+++..++.+++++.++.. ..+|.++.
T Consensus       241 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~y~~  282 (322)
T PRK07453        241 QKLFPWFQ-KNITGGYVSQELAGERVAQVVADPEF-AQSGVHWS  282 (322)
T ss_pred             HHHHHHHH-HHHhhceecHHHHhhHHHHhhcCccc-CCCCceee
Confidence              111111 11112335788889899998876654 36888776

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.9e-32  Score=226.00  Aligned_cols=236  Identities=25%  Similarity=0.376  Sum_probs=193.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      |++++|+++||||+++||.++++.|+++|++|+++ .|+++..+++.+.+... .++.++++|+++.++++++++++...
T Consensus         1 ~~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~   78 (238)
T PRK05786          1 MRLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCIN-SRNENKLKRMKKTLSKY-GNIHYVVGDVSSTESARNVIEKAAKV   78 (238)
T ss_pred             CCcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEE-eCCHHHHHHHHHHHHhc-CCeEEEECCCCCHHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999884 77777777665665543 36788999999999999999999888


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcccc-CCCCChhhHHhH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLV-GNIGQANYSAAK  180 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~-~~~~~~~Y~~sK  180 (269)
                      ++++|.+|+++|.....++.+  .+.++..++.|+.+++.+.+.++|.+.  +++++|++||..+.. +.+....|+.||
T Consensus        79 ~~~id~ii~~ag~~~~~~~~~--~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~~ss~~~~~~~~~~~~~Y~~sK  154 (238)
T PRK05786         79 LNAIDGLVVTVGGYVEDTVEE--FSGLEEMLTNHIKIPLYAVNASLRFLK--EGSSIVLVSSMSGIYKASPDQLSYAVAK  154 (238)
T ss_pred             hCCCCEEEEcCCCcCCCchHH--HHHHHHHHHHhchHHHHHHHHHHHHHh--cCCEEEEEecchhcccCCCCchHHHHHH
Confidence            899999999998754433332  378999999999999999999999884  358999999987743 567788899999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccE
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQV  260 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~  260 (269)
                      ++++.++++++.++.+.||++++|+||+++|++...   ...... ... .....+++++++.+.++++ +.....+|+.
T Consensus       155 ~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~---~~~~~~-~~~-~~~~~~~~~va~~~~~~~~-~~~~~~~g~~  228 (238)
T PRK05786        155 AGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPE---RNWKKL-RKL-GDDMAPPEDFAKVIIWLLT-DEADWVDGVV  228 (238)
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCch---hhhhhh-ccc-cCCCCCHHHHHHHHHHHhc-ccccCccCCE
Confidence            999999999999999999999999999999986321   111111 011 1234689999999999995 4666789999


Q ss_pred             EEecCCccC
Q 024338          261 LTIDGGMVM  269 (269)
Q Consensus       261 i~~dgg~~~  269 (269)
                      +.+|||..+
T Consensus       229 ~~~~~~~~~  237 (238)
T PRK05786        229 IPVDGGARL  237 (238)
T ss_pred             EEECCcccc
Confidence            999998653

>PRK07102 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.8e-32  Score=226.98  Aligned_cols=212  Identities=23%  Similarity=0.279  Sum_probs=184.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHc-CCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS-GGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      +|+++||||++|||.+++++|+++|++|+++ +|+++..++..+++... +.++.++++|++|.++++++++++.+   +
T Consensus         1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~---~   76 (243)
T PRK07102          1 MKKILIIGATSDIARACARRYAAAGARLYLA-ARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPA---L   76 (243)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEE-eCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhh---c
Confidence            3789999999999999999999999998884 78887777777666543 45788999999999999999998765   5


Q ss_pred             ccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHHH
Q 024338          105 VDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVI  184 (269)
Q Consensus       105 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~  184 (269)
                      +|++|||+|.....++.+.+.+++.+.+++|+.+++.+++.+.|.|.+++.+++|++||..+..+.++...|+.+|++++
T Consensus        77 ~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  156 (243)
T PRK07102         77 PDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRASNYVYGSAKAALT  156 (243)
T ss_pred             CCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCCCCcccHHHHHHHH
Confidence            69999999987666777888999999999999999999999999998888899999999999999899999999999999


Q ss_pred             HHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCC
Q 024338          185 GLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNP  251 (269)
Q Consensus       185 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~  251 (269)
                      +++++++.|+.+.||++++|+||+++|++.....          .+.....+|+++++.++.+++.+
T Consensus       157 ~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~~----------~~~~~~~~~~~~a~~i~~~~~~~  213 (243)
T PRK07102        157 AFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGLK----------LPGPLTAQPEEVAKDIFRAIEKG  213 (243)
T ss_pred             HHHHHHHHHhhccCcEEEEEecCcccChhhhccC----------CCccccCCHHHHHHHHHHHHhCC
Confidence            9999999999999999999999999999654321          12223558999999999998543

>PRK07578 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-32  Score=223.31  Aligned_cols=197  Identities=22%  Similarity=0.248  Sum_probs=169.5

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCccE
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDI  107 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~  107 (269)
                      +++||||++|||++++++|+++ ++|+++ .|+..                 .+++|++|.+++++++++    ++++|+
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~-~r~~~-----------------~~~~D~~~~~~~~~~~~~----~~~id~   58 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITA-GRSSG-----------------DVQVDITDPASIRALFEK----VGKVDA   58 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEE-ecCCC-----------------ceEecCCChHHHHHHHHh----cCCCCE
Confidence            6999999999999999999999 888774 66532                 378999999999998875    478999


Q ss_pred             EEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHHHHHH
Q 024338          108 LINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLT  187 (269)
Q Consensus       108 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~  187 (269)
                      +|||||.....++.+.+.++|++.+++|+.+++.+++.+.|+|.  +.++|+++||..+..+.++...|+++|+++++|+
T Consensus        59 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~  136 (199)
T PRK07578         59 VVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLN--DGGSFTLTSGILSDEPIPGGASAATVNGALEGFV  136 (199)
T ss_pred             EEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCeEEEEcccccCCCCCCchHHHHHHHHHHHHH
Confidence            99999987667788889999999999999999999999999995  4589999999999999999999999999999999


Q ss_pred             HHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEEEe
Q 024338          188 KTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTI  263 (269)
Q Consensus       188 ~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~  263 (269)
                      ++++.|+ ++||+|+.|+||+++|++....         ...+.....+|+++|+.+.++++.    ..+||+|.+
T Consensus       137 ~~la~e~-~~gi~v~~i~Pg~v~t~~~~~~---------~~~~~~~~~~~~~~a~~~~~~~~~----~~~g~~~~~  198 (199)
T PRK07578        137 KAAALEL-PRGIRINVVSPTVLTESLEKYG---------PFFPGFEPVPAARVALAYVRSVEG----AQTGEVYKV  198 (199)
T ss_pred             HHHHHHc-cCCeEEEEEcCCcccCchhhhh---------hcCCCCCCCCHHHHHHHHHHHhcc----ceeeEEecc
Confidence            9999999 8899999999999999863210         112233456899999999999843    579999876

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=100.00  E-value=1.3e-32  Score=217.16  Aligned_cols=226  Identities=25%  Similarity=0.331  Sum_probs=180.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHc-CCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh--
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKA-GCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA--  101 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~-G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~--  101 (269)
                      ..|.++||||++|||..++++|.+. |-.+++..+|+++...+..+...-...+++++++|+++.+++.++++++.+-  
T Consensus         2 spksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg   81 (249)
T KOG1611|consen    2 SPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVG   81 (249)
T ss_pred             CCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhcc
Confidence            3467999999999999999999865 7778877788888763333333334789999999999999999999999997  


Q ss_pred             cCCccEEEEccCCCCC-CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC-----------CeEEEEcCCccccC
Q 024338          102 WGTVDILINNAGITRD-TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKK-----------GRIINIASVVGLVG  169 (269)
Q Consensus       102 ~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-----------~~iv~isS~~~~~~  169 (269)
                      ..++|++|+|||+... ....+.+.+.|.+.+++|..++..++|+++|++.+...           ..|||+||.++-.+
T Consensus        82 ~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~~  161 (249)
T KOG1611|consen   82 SDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSIG  161 (249)
T ss_pred             cCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccccC
Confidence            4579999999998754 45667788999999999999999999999999976433           37999999887643


Q ss_pred             ---CCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHH
Q 024338          170 ---NIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEF  246 (269)
Q Consensus       170 ---~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~  246 (269)
                         ..++.+|.+||+|+++|+|+++.|+++.+|-|.++|||||+|+|.....               ..++|+.+..++.
T Consensus       162 ~~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg~~a---------------~ltveeSts~l~~  226 (249)
T KOG1611|consen  162 GFRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGGKKA---------------ALTVEESTSKLLA  226 (249)
T ss_pred             CCCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCCCCc---------------ccchhhhHHHHHH
Confidence               2467899999999999999999999999999999999999999876432               1255655555555


Q ss_pred             hccCCCCCCccccEEEecCC
Q 024338          247 LALNPAAGYITGQVLTIDGG  266 (269)
Q Consensus       247 l~~~~~~~~~~G~~i~~dgg  266 (269)
                      ....-. ..-+|-.++-|+-
T Consensus       227 ~i~kL~-~~hnG~ffn~dlt  245 (249)
T KOG1611|consen  227 SINKLK-NEHNGGFFNRDGT  245 (249)
T ss_pred             HHHhcC-cccCcceEccCCC
Confidence            443211 2346777777753

>PRK07326 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.6e-32  Score=224.94  Aligned_cols=220  Identities=35%  Similarity=0.531  Sum_probs=190.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      +.+.+++++||||+|+||.+++++|+++|++|++ ..|+++.++++.+++... .++..+.+|++|.++++++++++.+.
T Consensus         2 ~~~~~~~ilItGatg~iG~~la~~l~~~g~~V~~-~~r~~~~~~~~~~~l~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (237)
T PRK07326          2 MSLKGKVALITGGSKGIGFAIAEALLAEGYKVAI-TARDQKELEEAAAELNNK-GNVLGLAADVRDEADVQRAVDAIVAA   79 (237)
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHCCCEEEE-eeCCHHHHHHHHHHHhcc-CcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4467899999999999999999999999999888 478888887777777544 57888999999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKA  181 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  181 (269)
                      ++++|++||++|.....++.+.+.+++++.+++|+.+++.+++++++.+ ++..+++|++||..+..+.++...|+.+|+
T Consensus        80 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~~~iv~~ss~~~~~~~~~~~~y~~sk~  158 (237)
T PRK07326         80 FGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPAL-KRGGGYIINISSLAGTNFFAGGAAYNASKF  158 (237)
T ss_pred             cCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHH-HHCCeEEEEECChhhccCCCCCchHHHHHH
Confidence            9999999999998776777888999999999999999999999999998 445689999999999888888999999999


Q ss_pred             HHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCC
Q 024338          182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAA  253 (269)
Q Consensus       182 al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~  253 (269)
                      +++.+++.++.++...|++++.|+||++.|++.........         ....+++|+++.+++++..+..
T Consensus       159 a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~---------~~~~~~~d~a~~~~~~l~~~~~  221 (237)
T PRK07326        159 GLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTPSEKD---------AWKIQPEDIAQLVLDLLKMPPR  221 (237)
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEeeccccCcccccccchhh---------hccCCHHHHHHHHHHHHhCCcc
Confidence            99999999999999899999999999999987544321100         0124799999999999966543

>PRK07201 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-32  Score=259.02  Aligned_cols=218  Identities=26%  Similarity=0.351  Sum_probs=190.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      .++++|+++||||++|||+++++.|+++|++|++ .+|+++.++++.+++...+.++.++.+|++|.++++++++++.+.
T Consensus       367 ~~~~~k~vlItGas~giG~~la~~l~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  445 (657)
T PRK07201        367 GPLVGKVVLITGASSGIGRATAIKVAEAGATVFL-VARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAE  445 (657)
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHh
Confidence            4678999999999999999999999999999888 578888888888888776778999999999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCC--CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHh
Q 024338          102 WGTVDILINNAGITRDTLLMRM--KKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAA  179 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  179 (269)
                      ++++|++|||||......+.+.  +.+++++.+++|+.+++.+++.++|.|.+++.++||++||..+..+.++...|++|
T Consensus       446 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  525 (657)
T PRK07201        446 HGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPRFSAYVAS  525 (657)
T ss_pred             cCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCcchHHHH
Confidence            9999999999997654443322  25789999999999999999999999988888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhcc
Q 024338          180 KAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLAL  249 (269)
Q Consensus       180 K~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~  249 (269)
                      |+++++|+++++.|+.+.||+|++|+||+++|++......         .......+|+++|+.++..+.
T Consensus       526 K~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~~~---------~~~~~~~~~~~~a~~i~~~~~  586 (657)
T PRK07201        526 KAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPTKR---------YNNVPTISPEEAADMVVRAIV  586 (657)
T ss_pred             HHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcccc---------ccCCCCCCHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999998654211         011124589999999998763

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=100.00  E-value=1.1e-32  Score=217.17  Aligned_cols=164  Identities=37%  Similarity=0.608  Sum_probs=155.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCC--HHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARS--SKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~--~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      |+++||||++|||++++++|+++|+.++++++|+  .+..+++.+++++.+.++.++++|+++.++++++++++.+.+++
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            7899999999999999999999988777778888  77888888999888889999999999999999999999999999


Q ss_pred             ccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHHH
Q 024338          105 VDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVI  184 (269)
Q Consensus       105 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~  184 (269)
                      +|++|||+|.....++.+.+.+++++.+++|+.+++.+.+.++|    ++.++||++||..+..+.|++..|+++|+|++
T Consensus        81 ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~----~~~g~iv~~sS~~~~~~~~~~~~Y~askaal~  156 (167)
T PF00106_consen   81 LDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP----QGGGKIVNISSIAGVRGSPGMSAYSASKAALR  156 (167)
T ss_dssp             ESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH----HTTEEEEEEEEGGGTSSSTTBHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccchhhhhccccccceeeeeeehhee----ccccceEEecchhhccCCCCChhHHHHHHHHH
Confidence            99999999998888899999999999999999999999999999    55899999999999999999999999999999


Q ss_pred             HHHHHHHHHh
Q 024338          185 GLTKTVAKEY  194 (269)
Q Consensus       185 ~~~~~la~e~  194 (269)
                      +|+++++.|+
T Consensus       157 ~~~~~la~e~  166 (167)
T PF00106_consen  157 GLTQSLAAEL  166 (167)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHhc
Confidence            9999999986

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=3.9e-33  Score=217.76  Aligned_cols=185  Identities=25%  Similarity=0.319  Sum_probs=167.0

Q ss_pred             CCCEEEEeCCC-CchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH-hc
Q 024338           25 EAPVAVVTGAS-RGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD-AW  102 (269)
Q Consensus        25 ~~k~vlItGas-~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~-~~  102 (269)
                      +.|.|||||++ ||||.+++++|++.|+.|+.+ .|+.+.-.++...     ..+++..+|+++++++..+..++++ .+
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~At-aR~~e~M~~L~~~-----~gl~~~kLDV~~~~~V~~v~~evr~~~~   79 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYAT-ARRLEPMAQLAIQ-----FGLKPYKLDVSKPEEVVTVSGEVRANPD   79 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEE-ccccchHhhHHHh-----hCCeeEEeccCChHHHHHHHHHHhhCCC
Confidence            35889999997 899999999999999999994 7776666555533     2588899999999999999999999 78


Q ss_pred             CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHH
Q 024338          103 GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAG  182 (269)
Q Consensus       103 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  182 (269)
                      |++|+|+||||..-..|..+.+.+..+..|++|++|..++.|++. .+..+.+|.|||++|+.+..|.|+.+.|.+||+|
T Consensus        80 Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~-h~likaKGtIVnvgSl~~~vpfpf~~iYsAsKAA  158 (289)
T KOG1209|consen   80 GKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALS-HFLIKAKGTIVNVGSLAGVVPFPFGSIYSASKAA  158 (289)
T ss_pred             CceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHH-HHHHHccceEEEecceeEEeccchhhhhhHHHHH
Confidence            999999999998777888999999999999999999999999998 4556678999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhccCCeEEEEEecCCccCCcccc
Q 024338          183 VIGLTKTVAKEYASRNINVNAIAPGFIASDMTAK  216 (269)
Q Consensus       183 l~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~  216 (269)
                      +++++++|+.|++++||+|..+.||-+.|++.+.
T Consensus       159 ihay~~tLrlEl~PFgv~Vin~itGGv~T~Ia~k  192 (289)
T KOG1209|consen  159 IHAYARTLRLELKPFGVRVINAITGGVATDIADK  192 (289)
T ss_pred             HHHhhhhcEEeeeccccEEEEecccceecccccC
Confidence            9999999999999999999999999999987543

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=100.00  E-value=1.6e-32  Score=227.16  Aligned_cols=189  Identities=33%  Similarity=0.458  Sum_probs=169.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHc-CCcEEEEEccCCCHHH-HHHHHHHHHHhcC
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS-GGQALTFGGDVSKEAD-VESMIKTAVDAWG  103 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dls~~~~-~~~~~~~~~~~~~  103 (269)
                      |++++||||++|||++.|++||++|.+|++ .+|+.++++++++|+.+. +..++++.+|+++.++ .+++.+.+.+  .
T Consensus        49 g~WAVVTGaTDGIGKayA~eLAkrG~nvvL-IsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~--~  125 (312)
T KOG1014|consen   49 GSWAVVTGATDGIGKAYARELAKRGFNVVL-ISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAG--L  125 (312)
T ss_pred             CCEEEEECCCCcchHHHHHHHHHcCCEEEE-EeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcC--C
Confidence            499999999999999999999999999777 699999999999999776 5678899999998876 3333333322  2


Q ss_pred             CccEEEEccCCCC--CCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHH
Q 024338          104 TVDILINNAGITR--DTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKA  181 (269)
Q Consensus       104 ~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  181 (269)
                      ++.+||||+|...  +..+.+.+.+.+++.+.+|..+...+++.++|.|.++++|-|||+||.++..|.|.++.|++||.
T Consensus       126 ~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~~s~ysasK~  205 (312)
T KOG1014|consen  126 DVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPLLSVYSASKA  205 (312)
T ss_pred             ceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChhHHHHHHHHH
Confidence            6778999999876  56688889889999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc
Q 024338          182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL  217 (269)
Q Consensus       182 al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~  217 (269)
                      .++.|+++|+.|+..+||.|.++.|.+|.|++.+..
T Consensus       206 ~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~~~  241 (312)
T KOG1014|consen  206 FVDFFSRCLQKEYESKGIFVQSVIPYLVATKMAKYR  241 (312)
T ss_pred             HHHHHHHHHHHHHHhcCeEEEEeehhheeccccccC
Confidence            999999999999999999999999999999986543

>PRK07023 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-31  Score=223.27  Aligned_cols=215  Identities=27%  Similarity=0.373  Sum_probs=176.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHH-HHHhc---
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKT-AVDAW---  102 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~-~~~~~---  102 (269)
                      +++|||||++|||.+++++|+++|++|+++ .|+.+..  .   ....+.++.++.+|++|.+++++++++ +.+.+   
T Consensus         2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~-~r~~~~~--~---~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~   75 (243)
T PRK07023          2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGV-ARSRHPS--L---AAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDG   75 (243)
T ss_pred             ceEEEecCCcchHHHHHHHHHhCCCEEEEE-ecCcchh--h---hhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccC
Confidence            469999999999999999999999998885 5654321  1   122345788899999999999998887 55544   


Q ss_pred             CCccEEEEccCCCCC-CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHH
Q 024338          103 GTVDILINNAGITRD-TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKA  181 (269)
Q Consensus       103 ~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  181 (269)
                      +++|++|||+|.... .++.+.+.+++++.+++|+.+++.+++.+++.|.+++.++||++||..+..+.+++..|+++|+
T Consensus        76 ~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  155 (243)
T PRK07023         76 ASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYAGWSVYCATKA  155 (243)
T ss_pred             CCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCCCchHHHHHHH
Confidence            379999999997654 5677789999999999999999999999999998777899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC------hHHHHHHHhcCCCCCCCCHHHHHHH-HHHhc
Q 024338          182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG------EDLEKKILEKIPLGRYGQPEEVAGL-VEFLA  248 (269)
Q Consensus       182 al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~a~~-~~~l~  248 (269)
                      +++++++.++.+ .+.||++++|+||+++|++.....      ...........+.++..+|+++|+. +.+|.
T Consensus       156 a~~~~~~~~~~~-~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~l~  228 (243)
T PRK07023        156 ALDHHARAVALD-ANRALRIVSLAPGVVDTGMQATIRATDEERFPMRERFRELKASGALSTPEDAARRLIAYLL  228 (243)
T ss_pred             HHHHHHHHHHhc-CCCCcEEEEecCCccccHHHHHHHhcccccchHHHHHHHhhhcCCCCCHHHHHHHHHHHHh
Confidence            999999999999 778999999999999999754221      0112233445566778899999995 55665

>PRK06101 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.8e-31  Score=219.11  Aligned_cols=204  Identities=20%  Similarity=0.277  Sum_probs=171.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCcc
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVD  106 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id  106 (269)
                      ++++||||++|||.+++++|+++|++|++ .+|+++.++++.+    ...++.++++|++|.++++++++++..   .+|
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~-~~r~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~---~~d   73 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIA-CGRNQSVLDELHT----QSANIFTLAFDVTDHPGTKAALSQLPF---IPE   73 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEE-EECCHHHHHHHHH----hcCCCeEEEeeCCCHHHHHHHHHhccc---CCC
Confidence            78999999999999999999999999888 5788766555433    234678899999999999999887643   479


Q ss_pred             EEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHHHHH
Q 024338          107 ILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGL  186 (269)
Q Consensus       107 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~~  186 (269)
                      .+|||||.....+..+.+.+++++.+++|+.+++.+++.++|.|.  +++++|++||..+..+.++...|+++|++++.|
T Consensus        74 ~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~  151 (240)
T PRK06101         74 LWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLS--CGHRVVIVGSIASELALPRAEAYGASKAAVAYF  151 (240)
T ss_pred             EEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhh--cCCeEEEEechhhccCCCCCchhhHHHHHHHHH
Confidence            999999865444445678899999999999999999999999984  457899999999999999999999999999999


Q ss_pred             HHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccC
Q 024338          187 TKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALN  250 (269)
Q Consensus       187 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~  250 (269)
                      +++++.|+.+.||++++++||+++|++......          ......+|+++|+.++.....
T Consensus       152 ~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~~~----------~~~~~~~~~~~a~~i~~~i~~  205 (240)
T PRK06101        152 ARTLQLDLRPKGIEVVTVFPGFVATPLTDKNTF----------AMPMIITVEQASQEIRAQLAR  205 (240)
T ss_pred             HHHHHHHHHhcCceEEEEeCCcCCCCCcCCCCC----------CCCcccCHHHHHHHHHHHHhc
Confidence            999999999999999999999999997653210          111235899999999887754

>PRK09291 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-30  Score=218.37  Aligned_cols=219  Identities=21%  Similarity=0.294  Sum_probs=181.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTV  105 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i  105 (269)
                      +|++|||||+++||++++++|+++|++|++ ..|+.+..+++.+.....+.++.++.+|++|.++++++++      +++
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------~~i   74 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIA-GVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAE------WDV   74 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhc------CCC
Confidence            579999999999999999999999999988 4777777777766666656678899999999998887654      389


Q ss_pred             cEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHHHH
Q 024338          106 DILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIG  185 (269)
Q Consensus       106 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~  185 (269)
                      |+||||||.....++.+.+.+.++..+++|+.+++.+.+.+++.+.+++.++||++||..+..+.++...|++||++++.
T Consensus        75 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~Y~~sK~a~~~  154 (257)
T PRK09291         75 DVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITGPFTGAYCASKHALEA  154 (257)
T ss_pred             CEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCCCCcchhHHHHHHHHH
Confidence            99999999887778888999999999999999999999999999988777999999999999888999999999999999


Q ss_pred             HHHHHHHHhccCCeEEEEEecCCccCCcccccChHHH----------HHHHhcCCCCCCCCHHHHHHHHHHhccCCC
Q 024338          186 LTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLE----------KKILEKIPLGRYGQPEEVAGLVEFLALNPA  252 (269)
Q Consensus       186 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~  252 (269)
                      +++.++.++.+.||+++.|+||++.|++.....+...          .......+. ...+++++++.+..++.++.
T Consensus       155 ~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~  230 (257)
T PRK09291        155 IAEAMHAELKPFGIQVATVNPGPYLTGFNDTMAETPKRWYDPARNFTDPEDLAFPL-EQFDPQEMIDAMVEVIPADT  230 (257)
T ss_pred             HHHHHHHHHHhcCcEEEEEecCcccccchhhhhhhhhhhcchhhHHHhhhhhhccc-cCCCHHHHHHHHHHHhcCCC
Confidence            9999999999899999999999999987543221110          000111122 23478999998888875543

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.98  E-value=5.5e-31  Score=219.83  Aligned_cols=201  Identities=26%  Similarity=0.367  Sum_probs=164.0

Q ss_pred             HHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCccEEEEccCCCCCCccc
Q 024338           42 VATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLM  121 (269)
Q Consensus        42 ~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~  121 (269)
                      +|++|+++|++|+++ +|+.+..+     +      ..++++|++|.++++++++++.   +++|+||||||....    
T Consensus         1 ~a~~l~~~G~~Vv~~-~r~~~~~~-----~------~~~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nAG~~~~----   61 (241)
T PRK12428          1 TARLLRFLGARVIGV-DRREPGMT-----L------DGFIQADLGDPASIDAAVAALP---GRIDALFNIAGVPGT----   61 (241)
T ss_pred             ChHHHHhCCCEEEEE-eCCcchhh-----h------hHhhcccCCCHHHHHHHHHHhc---CCCeEEEECCCCCCC----
Confidence            478999999999885 66655431     1      1357899999999999998874   589999999997532    


Q ss_pred             CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccc---------------------------cCCCCCh
Q 024338          122 RMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGL---------------------------VGNIGQA  174 (269)
Q Consensus       122 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~---------------------------~~~~~~~  174 (269)
                          +.+++.+++|+.+++.+++.++|.|.  +.|+||++||..+.                           .+.++..
T Consensus        62 ----~~~~~~~~vN~~~~~~l~~~~~~~~~--~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  135 (241)
T PRK12428         62 ----APVELVARVNFLGLRHLTEALLPRMA--PGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALAT  135 (241)
T ss_pred             ----CCHHHhhhhchHHHHHHHHHHHHhcc--CCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCccc
Confidence                35789999999999999999999984  34899999999886                           3566788


Q ss_pred             hhHHhHHHHHHHHHHHH-HHhccCCeEEEEEecCCccCCcccccChHHH-HHH-HhcCCCCCCCCHHHHHHHHHHhccCC
Q 024338          175 NYSAAKAGVIGLTKTVA-KEYASRNINVNAIAPGFIASDMTAKLGEDLE-KKI-LEKIPLGRYGQPEEVAGLVEFLALNP  251 (269)
Q Consensus       175 ~Y~~sK~al~~~~~~la-~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~a~~~~~l~~~~  251 (269)
                      .|++||++++.|+++++ .|+++.||+||+|+||+++|++.....+... +.. ....|++++.+|+|+|++++||+ ++
T Consensus       136 ~Y~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~l~-s~  214 (241)
T PRK12428        136 GYQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSMLGQERVDSDAKRMGRPATADEQAAVLVFLC-SD  214 (241)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccchhhhhhHhhhhcccccCCCCCHHHHHHHHHHHc-Ch
Confidence            99999999999999999 9999999999999999999998654322111 111 12346777889999999999998 56


Q ss_pred             CCCCccccEEEecCCcc
Q 024338          252 AAGYITGQVLTIDGGMV  268 (269)
Q Consensus       252 ~~~~~~G~~i~~dgg~~  268 (269)
                      ...+++|+.+.+|||+.
T Consensus       215 ~~~~~~G~~i~vdgg~~  231 (241)
T PRK12428        215 AARWINGVNLPVDGGLA  231 (241)
T ss_pred             hhcCccCcEEEecCchH
Confidence            67799999999999974

>PRK08264 short chain dehydrogenase; Validated

Probab=99.97  E-value=8.3e-30  Score=212.06  Aligned_cols=203  Identities=31%  Similarity=0.416  Sum_probs=175.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC-cEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGC-KVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~-~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      |.+++|+++||||+++||.+++++|+++|+ +|++ +.|+.++.++       .+.++.++.+|++|.+++++++++   
T Consensus         2 ~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~-~~r~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~---   70 (238)
T PRK08264          2 MDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYA-AARDPESVTD-------LGPRVVPLQLDVTDPASVAAAAEA---   70 (238)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEE-EecChhhhhh-------cCCceEEEEecCCCHHHHHHHHHh---
Confidence            567899999999999999999999999999 7776 5777665443       345788899999999998887764   


Q ss_pred             hcCCccEEEEccCC-CCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHh
Q 024338          101 AWGTVDILINNAGI-TRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAA  179 (269)
Q Consensus       101 ~~~~id~li~~ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  179 (269)
                       ++++|++||++|. ....++.+.+.+++++.+++|+.+++.+++++.|.+.+++.+++|++||..+..+.++...|+.+
T Consensus        71 -~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~s  149 (238)
T PRK08264         71 -ASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPNLGTYSAS  149 (238)
T ss_pred             -cCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCCCchHhHHH
Confidence             4689999999998 55567788899999999999999999999999999987788999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhcc
Q 024338          180 KAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLAL  249 (269)
Q Consensus       180 K~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~  249 (269)
                      |++++.+++.++.++.+.|++++.+.||.++|++......             ...++++++..++....
T Consensus       150 K~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~~~~-------------~~~~~~~~a~~~~~~~~  206 (238)
T PRK08264        150 KAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAGLDA-------------PKASPADVARQILDALE  206 (238)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccccccCCc-------------CCCCHHHHHHHHHHHHh
Confidence            9999999999999999999999999999999997543211             13467888888887764

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=4.4e-30  Score=212.38  Aligned_cols=221  Identities=24%  Similarity=0.254  Sum_probs=191.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHc--CCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS--GGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      +.++|||+|+|||+++|+.+..+|++|.++ .|+.+++.++..++.-.  -.++.+..+|++|.+++..+++++++.+++
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~-ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~  112 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTIT-ARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGP  112 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEE-eccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCC
Confidence            689999999999999999999999999994 89999998888887543  234778899999999999999999999999


Q ss_pred             ccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCeEEEEcCCccccCCCCChhhHHhHHHH
Q 024338          105 VDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK-KGRIINIASVVGLVGNIGQANYSAAKAGV  183 (269)
Q Consensus       105 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK~al  183 (269)
                      +|.+|||||...++.+.+.+.++++..+++|+.++++.+++.++.|.+.. .|+|+.+||..+..+..++++|+++|.|+
T Consensus       113 ~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~GysaYs~sK~al  192 (331)
T KOG1210|consen  113 IDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGYSAYSPSKFAL  192 (331)
T ss_pred             cceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcccccccccHHHHH
Confidence            99999999999999999999999999999999999999999999997665 67999999999999999999999999999


Q ss_pred             HHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhc
Q 024338          184 IGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLA  248 (269)
Q Consensus       184 ~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~  248 (269)
                      .+++..+++|..+.||+|....|+.+.||.++.....-++.-.--........+|++|..++.=+
T Consensus       193 rgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En~tkP~~t~ii~g~ss~~~~e~~a~~~~~~~  257 (331)
T KOG1210|consen  193 RGLAEALRQELIKYGVHVTLYYPPDTLTPGFERENKTKPEETKIIEGGSSVIKCEEMAKAIVKGM  257 (331)
T ss_pred             HHHHHHHHHHHhhcceEEEEEcCCCCCCCccccccccCchheeeecCCCCCcCHHHHHHHHHhHH
Confidence            99999999999999999999999999999775433211111100011123357899999887655

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=2.6e-31  Score=209.84  Aligned_cols=236  Identities=24%  Similarity=0.279  Sum_probs=189.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      .+|++|+||+|.|||..+++.+.+.+...+. ..++....+ ......+.++.......|++..+-.+++++..+.+.+.
T Consensus         5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r-~g~~r~~a~-~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~gk   82 (253)
T KOG1204|consen    5 MRKVILLTGASRGIGTGSVATILAEDDEALR-YGVARLLAE-LEGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKGGK   82 (253)
T ss_pred             cceEEEEecCCCCccHHHHHHHHhcchHHHH-Hhhhccccc-ccceEEEecCCcceechHHHHHHHHHHHHhhhhhcCCc
Confidence            4689999999999999999988888766554 233332222 11111122334445667888888888888888888899


Q ss_pred             ccEEEEccCCCCC-C--cccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCeEEEEcCCccccCCCCChhhHHhH
Q 024338          105 VDILINNAGITRD-T--LLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK-KGRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       105 id~li~~ag~~~~-~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                      .|++|||||...+ .  ..+..+.++|++.|+.|+++.+.+.+.++|.+.+.+ .+.+||+||.++.+|.++|+.||++|
T Consensus        83 r~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~~wa~yc~~K  162 (253)
T KOG1204|consen   83 RDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFSSWAAYCSSK  162 (253)
T ss_pred             eeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccccHHHHhhhhH
Confidence            9999999998655 2  234678899999999999999999999999997764 78999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCccc------ccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCC
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTA------KLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAG  254 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~  254 (269)
                      +|.++|.+.+|.|-. ++|++.++.||.++|+|.-      .+.+.....+.+....+++.+|...|+.+..|+....  
T Consensus       163 aAr~m~f~~lA~EEp-~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~~~~~ll~~~~~a~~l~~L~e~~~--  239 (253)
T KOG1204|consen  163 AARNMYFMVLASEEP-FDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELKESGQLLDPQVTAKVLAKLLEKGD--  239 (253)
T ss_pred             HHHHHHHHHHhhcCc-cceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHHhcCCcCChhhHHHHHHHHHHhcC--
Confidence            999999999999976 7999999999999999852      2445556666666667788899999999999995432  


Q ss_pred             CccccEEEecC
Q 024338          255 YITGQVLTIDG  265 (269)
Q Consensus       255 ~~~G~~i~~dg  265 (269)
                      +.+||.+....
T Consensus       240 f~sG~~vdy~D  250 (253)
T KOG1204|consen  240 FVSGQHVDYYD  250 (253)
T ss_pred             ccccccccccc
Confidence            89999886543

>PRK08017 oxidoreductase; Provisional

Probab=99.97  E-value=3.8e-29  Score=210.26  Aligned_cols=219  Identities=23%  Similarity=0.275  Sum_probs=180.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc-CCc
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW-GTV  105 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~-~~i  105 (269)
                      |+++||||+|+||.++++.|+++|++|++ +.|+.+..+.+.    .  ..+..+.+|++|.++++++++++.+.. +++
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~-~~r~~~~~~~~~----~--~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~   75 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLA-ACRKPDDVARMN----S--LGFTGILLDLDDPESVERAADEVIALTDNRL   75 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEE-EeCCHHHhHHHH----h--CCCeEEEeecCCHHHHHHHHHHHHHhcCCCC
Confidence            78999999999999999999999999877 577776654332    2  136678999999999999999987754 689


Q ss_pred             cEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHHHH
Q 024338          106 DILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIG  185 (269)
Q Consensus       106 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~  185 (269)
                      |.+|||+|.....++.+.+.+++++.+++|+.+++.+.+.++|.|.+.+.+++|++||..+..+.++...|+++|++++.
T Consensus        76 ~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~~~~~  155 (256)
T PRK08017         76 YGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALEA  155 (256)
T ss_pred             eEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCCCCccHHHHHHHHHHH
Confidence            99999999876667778899999999999999999999999999988778899999999999999999999999999999


Q ss_pred             HHHHHHHHhccCCeEEEEEecCCccCCcccccChHH--HHHHHhcCCCCCCCCHHHHHHHHHHhccCCC
Q 024338          186 LTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDL--EKKILEKIPLGRYGQPEEVAGLVEFLALNPA  252 (269)
Q Consensus       186 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~  252 (269)
                      ++++++.++.+.|++++.++||++.|++........  ..........+.+.+|+|+++.+..+++.+.
T Consensus       156 ~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~  224 (256)
T PRK08017        156 WSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAARFTLGPEAVVPKLRHALESPK  224 (256)
T ss_pred             HHHHHHHHHhhcCCEEEEEeCCCcccchhhcccchhhccchhhhHHHhhcCCCHHHHHHHHHHHHhCCC
Confidence            999999999999999999999999998764322110  0000000001224689999999999996543

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.7e-29  Score=207.40  Aligned_cols=214  Identities=18%  Similarity=0.212  Sum_probs=169.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCcc
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVD  106 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id  106 (269)
                      |+++||||+++||.+++++|+++|++|+++ +|+++..+++. ++    .++.++.+|++|.++++++++++.+  +++|
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~-~r~~~~~~~~~-~~----~~~~~~~~D~~d~~~~~~~~~~~~~--~~id   73 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTAT-VRGPQQDTALQ-AL----PGVHIEKLDMNDPASLDQLLQRLQG--QRFD   73 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEE-eCCCcchHHHH-hc----cccceEEcCCCCHHHHHHHHHHhhc--CCCC
Confidence            789999999999999999999999998884 67665544332 11    3567788999999999999998854  4899


Q ss_pred             EEEEccCCCCC--CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCC---CCChhhHHhHH
Q 024338          107 ILINNAGITRD--TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGN---IGQANYSAAKA  181 (269)
Q Consensus       107 ~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~---~~~~~Y~~sK~  181 (269)
                      ++|||||....  .++.+.+.+++++.+++|+.+++.+++.++|.++. ..++++++||..+..+.   .+...|+++|+
T Consensus        74 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~iv~~ss~~g~~~~~~~~~~~~Y~~sK~  152 (225)
T PRK08177         74 LLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRP-GQGVLAFMSSQLGSVELPDGGEMPLYKASKA  152 (225)
T ss_pred             EEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhh-cCCEEEEEccCccccccCCCCCccchHHHHH
Confidence            99999998643  45677889999999999999999999999999853 35799999998776543   35678999999


Q ss_pred             HHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccE-
Q 024338          182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQV-  260 (269)
Q Consensus       182 al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~-  260 (269)
                      +++.|+++++.|+.++||++++|+||+++|++.....               ..++++.+..++.+...  .....|+. 
T Consensus       153 a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~~~~~~---------------~~~~~~~~~~~~~~~~~--~~~~~~~~~  215 (225)
T PRK08177        153 ALNSMTRSFVAELGEPTLTVLSMHPGWVKTDMGGDNA---------------PLDVETSVKGLVEQIEA--ASGKGGHRF  215 (225)
T ss_pred             HHHHHHHHHHHHhhcCCeEEEEEcCCceecCCCCCCC---------------CCCHHHHHHHHHHHHHh--CCccCCCce
Confidence            9999999999999999999999999999999854321               12566666666666532  22334444 


Q ss_pred             EEecCC
Q 024338          261 LTIDGG  266 (269)
Q Consensus       261 i~~dgg  266 (269)
                      +..+|+
T Consensus       216 ~~~~~~  221 (225)
T PRK08177        216 IDYQGE  221 (225)
T ss_pred             eCcCCc
Confidence            445554

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.96  E-value=4.6e-28  Score=202.44  Aligned_cols=195  Identities=17%  Similarity=0.170  Sum_probs=148.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCH-HHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSS-KEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~-~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      .+++|+++||||++|||++++++|+++|++|+++ .|+. +..+.    ... . ....+.+|++|.+++++       .
T Consensus        11 ~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~-~r~~~~~~~~----~~~-~-~~~~~~~D~~~~~~~~~-------~   76 (245)
T PRK12367         11 TWQGKRIGITGASGALGKALTKAFRAKGAKVIGL-THSKINNSES----NDE-S-PNEWIKWECGKEESLDK-------Q   76 (245)
T ss_pred             hhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEE-ECCchhhhhh----hcc-C-CCeEEEeeCCCHHHHHH-------h
Confidence            4678999999999999999999999999999885 5554 22211    111 1 22568899999987764       3


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC---CCCeEEEEcCCccccCCCCChhhHH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKK---KKGRIINIASVVGLVGNIGQANYSA  178 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~---~~~~iv~isS~~~~~~~~~~~~Y~~  178 (269)
                      ++++|++|||||....   .+.+.+++++.+++|+.+++.+++.++|.|.++   .++.+++.+|.++..+ ++...|++
T Consensus        77 ~~~iDilVnnAG~~~~---~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~-~~~~~Y~a  152 (245)
T PRK12367         77 LASLDVLILNHGINPG---GRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQP-ALSPSYEI  152 (245)
T ss_pred             cCCCCEEEECCccCCc---CCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCC-CCCchhHH
Confidence            4689999999997532   346789999999999999999999999999763   2334555566666544 46778999


Q ss_pred             hHHHHHHHH---HHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCC
Q 024338          179 AKAGVIGLT---KTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNP  251 (269)
Q Consensus       179 sK~al~~~~---~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~  251 (269)
                      ||+|+..+.   +.++.|..+.|++|+.++||+++|++..                ....+|+++|+.+++.+...
T Consensus       153 SKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~~----------------~~~~~~~~vA~~i~~~~~~~  212 (245)
T PRK12367        153 SKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSELNP----------------IGIMSADFVAKQILDQANLG  212 (245)
T ss_pred             HHHHHHHHHHHHHHHHHhhcccccEEEEecCCCcccccCc----------------cCCCCHHHHHHHHHHHHhcC
Confidence            999986543   4455566788999999999999998621                01348999999999998543

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2e-27  Score=196.16  Aligned_cols=219  Identities=26%  Similarity=0.416  Sum_probs=178.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTV  105 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i  105 (269)
                      .|++|||||+++||.++++.|+++ ++|+++ .|+.+..+++.++.    ..+.++++|++|.+++++++++.    +++
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~-~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~----~~i   72 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLG-GRPAERLDELAAEL----PGATPFPVDLTDPEAIAAAVEQL----GRL   72 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEE-eCCHHHHHHHHHHh----ccceEEecCCCCHHHHHHHHHhc----CCC
Confidence            479999999999999999999999 998885 77776655544332    35778999999999988887653    589


Q ss_pred             cEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHHHH
Q 024338          106 DILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIG  185 (269)
Q Consensus       106 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~  185 (269)
                      |++||++|.....++.+.+.+++.+.+++|+.+++.+.+.+++.++++ .+++|++||..+..+.++...|+.+|.+++.
T Consensus        73 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~~~~~~~~y~~~K~a~~~  151 (227)
T PRK08219         73 DVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA-HGHVVFINSGAGLRANPGWGSYAASKFALRA  151 (227)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCeEEEEcchHhcCcCCCCchHHHHHHHHHH
Confidence            999999998766667778899999999999999999999999988654 5799999999999889999999999999999


Q ss_pred             HHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEEEec
Q 024338          186 LTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTID  264 (269)
Q Consensus       186 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~d  264 (269)
                      +++.++.++... ++++++.||+++++........    .....+.+++.+++|+++.++++++.+.    .|+++.++
T Consensus       152 ~~~~~~~~~~~~-i~~~~i~pg~~~~~~~~~~~~~----~~~~~~~~~~~~~~dva~~~~~~l~~~~----~~~~~~~~  221 (227)
T PRK08219        152 LADALREEEPGN-VRVTSVHPGRTDTDMQRGLVAQ----EGGEYDPERYLRPETVAKAVRFAVDAPP----DAHITEVV  221 (227)
T ss_pred             HHHHHHHHhcCC-ceEEEEecCCccchHhhhhhhh----hccccCCCCCCCHHHHHHHHHHHHcCCC----CCccceEE
Confidence            999999988766 9999999999988754332211    1112233556799999999999996543    35555543

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.2e-27  Score=197.15  Aligned_cols=213  Identities=20%  Similarity=0.267  Sum_probs=172.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCcc
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVD  106 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id  106 (269)
                      |+++||||+++||.+++++|+++|++|++ ..|+.+..+++.    ..  .+.++.+|+++.++++++++++..  +++|
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~-~~r~~~~~~~~~----~~--~~~~~~~D~~~~~~v~~~~~~~~~--~~~d   72 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIA-TARDAAALAALQ----AL--GAEALALDVADPASVAGLAWKLDG--EALD   72 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEE-EECCHHHHHHHH----hc--cceEEEecCCCHHHHHHHHHHhcC--CCCC
Confidence            68999999999999999999999999888 477766554433    22  345789999999999998877643  4799


Q ss_pred             EEEEccCCCC--CCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCC---hhhHHhHH
Q 024338          107 ILINNAGITR--DTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQ---ANYSAAKA  181 (269)
Q Consensus       107 ~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~---~~Y~~sK~  181 (269)
                      ++|||+|...  ..+..+.+.+++++.+++|+.+++.++++++|.|.+ ..++++++||..+..+....   ..|+++|+
T Consensus        73 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~g~iv~isS~~~~~~~~~~~~~~~Y~~sK~  151 (222)
T PRK06953         73 AAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEA-AGGVLAVLSSRMGSIGDATGTTGWLYRASKA  151 (222)
T ss_pred             EEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhc-cCCeEEEEcCcccccccccCCCccccHHhHH
Confidence            9999999763  245567789999999999999999999999998854 46899999998877664332   36999999


Q ss_pred             HHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEE
Q 024338          182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL  261 (269)
Q Consensus       182 al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i  261 (269)
                      +++.+++.++.++  .++++++|+||+++|++....               ....+++.+..+..+..... ...+|..+
T Consensus       152 a~~~~~~~~~~~~--~~i~v~~v~Pg~i~t~~~~~~---------------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  213 (222)
T PRK06953        152 ALNDALRAASLQA--RHATCIALHPGWVRTDMGGAQ---------------AALDPAQSVAGMRRVIAQAT-RRDNGRFF  213 (222)
T ss_pred             HHHHHHHHHhhhc--cCcEEEEECCCeeecCCCCCC---------------CCCCHHHHHHHHHHHHHhcC-cccCceEE
Confidence            9999999999886  369999999999999975421               12368888888888765543 46889999


Q ss_pred             EecCCc
Q 024338          262 TIDGGM  267 (269)
Q Consensus       262 ~~dgg~  267 (269)
                      ..|++.
T Consensus       214 ~~~~~~  219 (222)
T PRK06953        214 QYDGVE  219 (222)
T ss_pred             eeCCcC
Confidence            888764

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.95  E-value=1.9e-25  Score=197.54  Aligned_cols=197  Identities=20%  Similarity=0.186  Sum_probs=150.7

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      ...+++|+++||||++|||++++++|+++|++|+++ .|+++.+++.   +.....++..+.+|++|.+++.+.+     
T Consensus       173 a~sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l-~r~~~~l~~~---~~~~~~~v~~v~~Dvsd~~~v~~~l-----  243 (406)
T PRK07424        173 ALSLKGKTVAVTGASGTLGQALLKELHQQGAKVVAL-TSNSDKITLE---INGEDLPVKTLHWQVGQEAALAELL-----  243 (406)
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEE-eCCHHHHHHH---HhhcCCCeEEEEeeCCCHHHHHHHh-----
Confidence            356789999999999999999999999999999885 6665544322   2222335677899999998776543     


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC----CeEEEEcCCccccCCCCChhh
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKK----GRIINIASVVGLVGNIGQANY  176 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~----~~iv~isS~~~~~~~~~~~~Y  176 (269)
                        +++|++|||||....   .+.+.+++++.+++|+.+++.++++++|.|++++.    +.+|++|+ ++ ...+..+.|
T Consensus       244 --~~IDiLInnAGi~~~---~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~-~~~~~~~~Y  316 (406)
T PRK07424        244 --EKVDILIINHGINVH---GERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AE-VNPAFSPLY  316 (406)
T ss_pred             --CCCCEEEECCCcCCC---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-cc-ccCCCchHH
Confidence              589999999997543   35788899999999999999999999999976542    34666665 33 333456789


Q ss_pred             HHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCC
Q 024338          177 SAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPA  252 (269)
Q Consensus       177 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~  252 (269)
                      ++||+|+..|+. +.++.  .++.+..+.||+++|++..               . ...+||++|+.+++.++.++
T Consensus       317 ~ASKaAl~~l~~-l~~~~--~~~~I~~i~~gp~~t~~~~---------------~-~~~spe~vA~~il~~i~~~~  373 (406)
T PRK07424        317 ELSKRALGDLVT-LRRLD--APCVVRKLILGPFKSNLNP---------------I-GVMSADWVAKQILKLAKRDF  373 (406)
T ss_pred             HHHHHHHHHHHH-HHHhC--CCCceEEEEeCCCcCCCCc---------------C-CCCCHHHHHHHHHHHHHCCC
Confidence            999999999974 54443  4677788899999988621               1 13489999999999985543

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.94  E-value=3e-25  Score=229.04  Aligned_cols=183  Identities=19%  Similarity=0.237  Sum_probs=158.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHc-CCcEEEEecCCH------------------------------------------
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKA-GCKVLVNYARSS------------------------------------------   61 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~-G~~v~i~~~r~~------------------------------------------   61 (269)
                      +++++|||||++|||.++|++|+++ |++++++ +|+.                                          
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~-gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~ 2074 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILA-GRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVR 2074 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEE-eCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhccc
Confidence            5899999999999999999999998 6888774 6661                                          


Q ss_pred             -----HHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHh
Q 024338           62 -----KEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNL  136 (269)
Q Consensus        62 -----~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~  136 (269)
                           .+..+..+.+.+.+.++.++.||++|.++++++++++.+. ++||+||||||+.....+.+.+.++|++.+++|+
T Consensus      2075 ~~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv 2153 (2582)
T TIGR02813      2075 PVLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKV 2153 (2582)
T ss_pred             ccchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccCCCCCcccCCHHHHHHHHHHHH
Confidence                 1112233445555778899999999999999999999877 6899999999998778889999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccc
Q 024338          137 TGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTA  215 (269)
Q Consensus       137 ~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~  215 (269)
                      .|.+.+++++.+.+    .++||++||+.+..+.+++..|+++|++++.+++.++.++.  +++|++|+||+++|++..
T Consensus      2154 ~G~~~Ll~al~~~~----~~~IV~~SSvag~~G~~gqs~YaaAkaaL~~la~~la~~~~--~irV~sI~wG~wdtgm~~ 2226 (2582)
T TIGR02813      2154 DGLLSLLAALNAEN----IKLLALFSSAAGFYGNTGQSDYAMSNDILNKAALQLKALNP--SAKVMSFNWGPWDGGMVN 2226 (2582)
T ss_pred             HHHHHHHHHHHHhC----CCeEEEEechhhcCCCCCcHHHHHHHHHHHHHHHHHHHHcC--CcEEEEEECCeecCCccc
Confidence            99999988887643    35899999999999999999999999999999999999874  499999999999998764

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.93  E-value=1.4e-24  Score=171.66  Aligned_cols=176  Identities=26%  Similarity=0.365  Sum_probs=148.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHH---HHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEE---VCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~---~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      |+++||||+++||.+++++|+++|+.++++..|+++..+.   ..++++..+.++.++.+|+++.++++++++++...++
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG   80 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            5799999999999999999999998644435665443322   2345555567888899999999999999999999899


Q ss_pred             CccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHH
Q 024338          104 TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGV  183 (269)
Q Consensus       104 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al  183 (269)
                      ++|++||++|.....++.+.+.++++..+++|+.+++.+.+.+.+    .+.++++++||..+..+.++...|+++|.++
T Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~ii~~ss~~~~~~~~~~~~y~~sk~~~  156 (180)
T smart00822       81 PLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRD----LPLDFFVLFSSVAGVLGNPGQANYAAANAFL  156 (180)
T ss_pred             CeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhcc----CCcceEEEEccHHHhcCCCCchhhHHHHHHH
Confidence            999999999987666777888999999999999999999998843    4568999999999999999999999999998


Q ss_pred             HHHHHHHHHHhccCCeEEEEEecCCcc
Q 024338          184 IGLTKTVAKEYASRNINVNAIAPGFIA  210 (269)
Q Consensus       184 ~~~~~~la~e~~~~gi~v~~v~pG~v~  210 (269)
                      +.+++.++    ..|+++..+.||+++
T Consensus       157 ~~~~~~~~----~~~~~~~~~~~g~~~  179 (180)
T smart00822      157 DALAAHRR----ARGLPATSINWGAWA  179 (180)
T ss_pred             HHHHHHHH----hcCCceEEEeecccc
Confidence            88887654    458889999999875

It uses NADPH to reduce the keto group to a hydroxy group.

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.92  E-value=9.4e-24  Score=191.26  Aligned_cols=219  Identities=18%  Similarity=0.190  Sum_probs=162.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHc---------CCcEEEEEccCCCHHHHHH
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS---------GGQALTFGGDVSKEADVES   93 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~---------~~~~~~~~~Dls~~~~~~~   93 (269)
                      ...||++|||||+|+||++++++|+++|++|+++ .|+.+.++++.+++.+.         ..++.++.+|++|.+++++
T Consensus        77 ~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval-~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~  155 (576)
T PLN03209         77 TKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAG-VRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGP  155 (576)
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEE-eCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHH
Confidence            3478999999999999999999999999999884 78888777776655431         1357889999999988766


Q ss_pred             HHHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccc-cCCCC
Q 024338           94 MIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGL-VGNIG  172 (269)
Q Consensus        94 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~-~~~~~  172 (269)
                      ++       +++|+||||+|....      ...++...+++|+.+..++++++.+    .+.++||++||..+. .+.+.
T Consensus       156 aL-------ggiDiVVn~AG~~~~------~v~d~~~~~~VN~~Gt~nLl~Aa~~----agVgRIV~VSSiga~~~g~p~  218 (576)
T PLN03209        156 AL-------GNASVVICCIGASEK------EVFDVTGPYRIDYLATKNLVDAATV----AKVNHFILVTSLGTNKVGFPA  218 (576)
T ss_pred             Hh-------cCCCEEEEccccccc------cccchhhHHHHHHHHHHHHHHHHHH----hCCCEEEEEccchhcccCccc
Confidence            44       589999999986532      1124677899999998888888754    456899999998764 33332


Q ss_pred             ChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCC
Q 024338          173 QANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPA  252 (269)
Q Consensus       173 ~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~  252 (269)
                      . .|. +|+++..+.+.+..++...||+++.|+||++.|++................+.++..+.+|+|+++++++++++
T Consensus       219 ~-~~~-sk~~~~~~KraaE~~L~~sGIrvTIVRPG~L~tp~d~~~~t~~v~~~~~d~~~gr~isreDVA~vVvfLasd~~  296 (576)
T PLN03209        219 A-ILN-LFWGVLCWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNLTLSEEDTLFGGQVSNLQVAELMACMAKNRR  296 (576)
T ss_pred             c-chh-hHHHHHHHHHHHHHHHHHcCCCEEEEECCeecCCccccccccceeeccccccCCCccCHHHHHHHHHHHHcCch
Confidence            2 244 78888888888888888899999999999999885432111100111122455667789999999999997665


Q ss_pred             CCCccccEEEe
Q 024338          253 AGYITGQVLTI  263 (269)
Q Consensus       253 ~~~~~G~~i~~  263 (269)
                      +.+  +.++.+
T Consensus       297 as~--~kvvev  305 (576)
T PLN03209        297 LSY--CKVVEV  305 (576)
T ss_pred             hcc--ceEEEE
Confidence            443  455544

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.92  E-value=3.4e-24  Score=171.83  Aligned_cols=194  Identities=20%  Similarity=0.272  Sum_probs=166.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCc----EEEEecCCHHHHHHHHHHHHHcCC----cEEEEEccCCCHHHHHHHHHH
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCK----VLVNYARSSKEAEEVCKEIEASGG----QALTFGGDVSKEADVESMIKT   97 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~----v~i~~~r~~~~~~~~~~~l~~~~~----~~~~~~~Dls~~~~~~~~~~~   97 (269)
                      .|+++|||+++|||.++|++|.+....    .+++..|+.++.++.+..+++...    ++.++.+|+++++++.++..+
T Consensus         3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~d   82 (341)
T KOG1478|consen    3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKD   82 (341)
T ss_pred             ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHH
Confidence            499999999999999999999877544    223468999999999998887644    577899999999999999999


Q ss_pred             HHHhcCCccEEEEccCCCCCCccc---------------------------CCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 024338           98 AVDAWGTVDILINNAGITRDTLLM---------------------------RMKKSQWQDVIDLNLTGVFLCTQAAAKIM  150 (269)
Q Consensus        98 ~~~~~~~id~li~~ag~~~~~~~~---------------------------~~~~~~~~~~~~~n~~~~~~l~~~~~~~l  150 (269)
                      +..+|.++|.++.|||+.+...++                           ..+.|++.+.|+.|++|++.+++.+.|++
T Consensus        83 i~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pll  162 (341)
T KOG1478|consen   83 IKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPLL  162 (341)
T ss_pred             HHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhHh
Confidence            999999999999999986543222                           13568899999999999999999999999


Q ss_pred             HhCCCCeEEEEcCCccccC---------CCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccCh
Q 024338          151 MKKKKGRIINIASVVGLVG---------NIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGE  219 (269)
Q Consensus       151 ~~~~~~~iv~isS~~~~~~---------~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~  219 (269)
                      .......+|++||.-+...         ..+..+|..||.+++.+.-.+.+.+.+.|+..+.++||..-|.+.....+
T Consensus       163 ~~~~~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~~~~~~l~  240 (341)
T KOG1478|consen  163 CHSDNPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTNSFSEYLN  240 (341)
T ss_pred             hcCCCCeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecchhhhhhh
Confidence            8888889999999877532         35778999999999999999999999999999999999998887765543

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.92  E-value=8.7e-24  Score=168.72  Aligned_cols=175  Identities=25%  Similarity=0.376  Sum_probs=138.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCH---HHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSS---KEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~---~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      ++|||||.+|||..+++.|+++|..-+++++|+.   ...++..+++++.+.++.+++||++|+++++++++++.+.+++
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~   81 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP   81 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence            6899999999999999999999976555567772   3455688888888999999999999999999999999999999


Q ss_pred             ccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHHH
Q 024338          105 VDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVI  184 (269)
Q Consensus       105 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~  184 (269)
                      ||.|||+||...+.++.+.+.++++..+...+.+.+++.+.+.+    .+...+|++||+.+..+.+++..|+++.+.++
T Consensus        82 i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~----~~l~~~i~~SSis~~~G~~gq~~YaaAN~~ld  157 (181)
T PF08659_consen   82 IDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALEN----RPLDFFILFSSISSLLGGPGQSAYAAANAFLD  157 (181)
T ss_dssp             EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTT----TTTSEEEEEEEHHHHTT-TTBHHHHHHHHHHH
T ss_pred             cceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhc----CCCCeEEEECChhHhccCcchHhHHHHHHHHH
Confidence            99999999998888999999999999999999999998887754    56689999999999999999999999999888


Q ss_pred             HHHHHHHHHhccCCeEEEEEecCCcc
Q 024338          185 GLTKTVAKEYASRNINVNAIAPGFIA  210 (269)
Q Consensus       185 ~~~~~la~e~~~~gi~v~~v~pG~v~  210 (269)
                      .|++...    ..|.++.+|+.|+.+
T Consensus       158 a~a~~~~----~~g~~~~sI~wg~W~  179 (181)
T PF08659_consen  158 ALARQRR----SRGLPAVSINWGAWD  179 (181)
T ss_dssp             HHHHHHH----HTTSEEEEEEE-EBS
T ss_pred             HHHHHHH----hCCCCEEEEEccccC
Confidence            8877544    347788888887643

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.91  E-value=1.4e-22  Score=176.28  Aligned_cols=212  Identities=16%  Similarity=0.174  Sum_probs=157.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcC--CcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAG--CKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G--~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      +++|++|||||+|+||.+++++|+++|  ++|++ .+|+.....++...+.  ..++.++.+|++|.+++.++++     
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~-~~r~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~l~~~~~-----   73 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIII-YSRDELKQWEMQQKFP--APCLRFFIGDVRDKERLTRALR-----   73 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEE-EcCChhHHHHHHHHhC--CCcEEEEEccCCCHHHHHHHHh-----
Confidence            468999999999999999999999987  66766 4666554444433331  2468889999999998888775     


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKA  181 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  181 (269)
                        ++|+|||+||.... +..+.   ..++.+++|+.+++++++++.+    .+.+++|++||.....|   ...|+.||+
T Consensus        74 --~iD~Vih~Ag~~~~-~~~~~---~~~~~~~~Nv~g~~~ll~aa~~----~~~~~iV~~SS~~~~~p---~~~Y~~sK~  140 (324)
T TIGR03589        74 --GVDYVVHAAALKQV-PAAEY---NPFECIRTNINGAQNVIDAAID----NGVKRVVALSTDKAANP---INLYGATKL  140 (324)
T ss_pred             --cCCEEEECcccCCC-chhhc---CHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEeCCCCCCC---CCHHHHHHH
Confidence              58999999997532 22222   2356899999999999998875    45579999999755433   467999999


Q ss_pred             HHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhc---CCC------CCCCCHHHHHHHHHHhccCCC
Q 024338          182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEK---IPL------GRYGQPEEVAGLVEFLALNPA  252 (269)
Q Consensus       182 al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~---~~~------~~~~~~~~~a~~~~~l~~~~~  252 (269)
                      +.+.++++++.+....|++++++.||.+.+|... ..+.+......+   .++      +.+.+++|++++++.++... 
T Consensus       141 ~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~~-~i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~~~al~~~-  218 (324)
T TIGR03589       141 ASDKLFVAANNISGSKGTRFSVVRYGNVVGSRGS-VVPFFKSLKEEGVTELPITDPRMTRFWITLEQGVNFVLKSLERM-  218 (324)
T ss_pred             HHHHHHHHHHhhccccCcEEEEEeecceeCCCCC-cHHHHHHHHHhCCCCeeeCCCCceEeeEEHHHHHHHHHHHHhhC-
Confidence            9999999998888888999999999999987422 223333332222   222      23568999999999998532 


Q ss_pred             CCCccccEE
Q 024338          253 AGYITGQVL  261 (269)
Q Consensus       253 ~~~~~G~~i  261 (269)
                         ..|+++
T Consensus       219 ---~~~~~~  224 (324)
T TIGR03589       219 ---LGGEIF  224 (324)
T ss_pred             ---CCCCEE
Confidence               135666

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.90  E-value=9.7e-22  Score=172.74  Aligned_cols=229  Identities=14%  Similarity=0.078  Sum_probs=163.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      ++||++|||||+|+||.++++.|+++|++|+++ +|+.....+....+. ...++.++.+|++|.+++.+++++.     
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~-~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~-----   74 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGY-SLDPPTSPNLFELLN-LAKKIEDHFGDIRDAAKLRKAIAEF-----   74 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEE-eCCCccchhHHHHHh-hcCCceEEEccCCCHHHHHHHHhhc-----
Confidence            468999999999999999999999999999885 565544333333332 1345778899999999999988864     


Q ss_pred             CccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcccc------------CCC
Q 024338          104 TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLV------------GNI  171 (269)
Q Consensus       104 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~------------~~~  171 (269)
                      ++|+|||+|+....    ..+.++....+++|+.+++.+++++.+   ....+++|++||...+.            +..
T Consensus        75 ~~d~vih~A~~~~~----~~~~~~~~~~~~~N~~g~~~ll~a~~~---~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~  147 (349)
T TIGR02622        75 KPEIVFHLAAQPLV----RKSYADPLETFETNVMGTVNLLEAIRA---IGSVKAVVNVTSDKCYRNDEWVWGYRETDPLG  147 (349)
T ss_pred             CCCEEEECCccccc----ccchhCHHHHHHHhHHHHHHHHHHHHh---cCCCCEEEEEechhhhCCCCCCCCCccCCCCC
Confidence            68999999995432    234456778899999999999998743   12256999999964331            223


Q ss_pred             CChhhHHhHHHHHHHHHHHHHHhcc----CCeEEEEEecCCccCCccc---ccChHHHHHHHhcC--------CCCCCCC
Q 024338          172 GQANYSAAKAGVIGLTKTVAKEYAS----RNINVNAIAPGFIASDMTA---KLGEDLEKKILEKI--------PLGRYGQ  236 (269)
Q Consensus       172 ~~~~Y~~sK~al~~~~~~la~e~~~----~gi~v~~v~pG~v~t~~~~---~~~~~~~~~~~~~~--------~~~~~~~  236 (269)
                      +...|+.||.+.+.+++.++.++.+    .|++++.+.|+.+.+|...   ...+.+......+.        ..+.+..
T Consensus       148 p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~rd~i~  227 (349)
T TIGR02622       148 GHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVIIRNPDATRPWQH  227 (349)
T ss_pred             CCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEECCCCcccceee
Confidence            4678999999999999999888754    4899999999999987421   22233333333221        1234567


Q ss_pred             HHHHHHHHHHhccCCCCC-CccccEEEecCC
Q 024338          237 PEEVAGLVEFLALNPAAG-YITGQVLTIDGG  266 (269)
Q Consensus       237 ~~~~a~~~~~l~~~~~~~-~~~G~~i~~dgg  266 (269)
                      .+|++++++.++...... ...|+++++.+|
T Consensus       228 v~D~a~a~~~~~~~~~~~~~~~~~~yni~s~  258 (349)
T TIGR02622       228 VLEPLSGYLLLAEKLFTGQAEFAGAWNFGPR  258 (349)
T ss_pred             HHHHHHHHHHHHHHHhhcCccccceeeeCCC
Confidence            899999998876421100 123578888654

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.90  E-value=1.4e-21  Score=170.04  Aligned_cols=220  Identities=19%  Similarity=0.210  Sum_probs=158.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHc--CCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS--GGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      ++|++|||||+|+||.+++++|+++|++|+++ .|+.+...+........  ..++.++.+|++|.++++++++      
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   76 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINAT-VRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID------   76 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEE-EcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc------
Confidence            47999999999999999999999999998874 56654443332222111  2468889999999998888776      


Q ss_pred             CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCC-----------
Q 024338          103 GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNI-----------  171 (269)
Q Consensus       103 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~-----------  171 (269)
                       ++|+||||||....    ..+.+.+.+.+++|+.+++++++++.+.+   +.++||++||..+..+..           
T Consensus        77 -~~d~vih~A~~~~~----~~~~~~~~~~~~~n~~g~~~ll~a~~~~~---~~~~iv~~SS~~~~~~~~~~~~~~~~~~E  148 (325)
T PLN02989         77 -GCETVFHTASPVAI----TVKTDPQVELINPAVNGTINVLRTCTKVS---SVKRVILTSSMAAVLAPETKLGPNDVVDE  148 (325)
T ss_pred             -CCCEEEEeCCCCCC----CCCCChHHHHHHHHHHHHHHHHHHHHHcC---CceEEEEecchhheecCCccCCCCCccCc
Confidence             68999999996432    22345678899999999999999987743   346999999987643211           


Q ss_pred             -----------CChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC---hHHHHHHHh-cCCC----C
Q 024338          172 -----------GQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG---EDLEKKILE-KIPL----G  232 (269)
Q Consensus       172 -----------~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~---~~~~~~~~~-~~~~----~  232 (269)
                                 ....|+.||.+.+.+++.++.++   |+.++.+.|+.+.+|......   ......... ..+.    +
T Consensus       149 ~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~~~~~r  225 (325)
T PLN02989        149 TFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKDN---EIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPFNTTHH  225 (325)
T ss_pred             CCCCchhHhcccccchHHHHHHHHHHHHHHHHHc---CCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCCCCcCc
Confidence                       02469999999998888776654   799999999999998654321   122222222 2233    3


Q ss_pred             CCCCHHHHHHHHHHhccCCCCCCccccEEEecCC
Q 024338          233 RYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGG  266 (269)
Q Consensus       233 ~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg  266 (269)
                      .+.+++|+|++++.++..+..    +..++++|+
T Consensus       226 ~~i~v~Dva~a~~~~l~~~~~----~~~~ni~~~  255 (325)
T PLN02989        226 RFVDVRDVALAHVKALETPSA----NGRYIIDGP  255 (325)
T ss_pred             CeeEHHHHHHHHHHHhcCccc----CceEEEecC
Confidence            466799999999998855432    346777654

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.89  E-value=3.1e-21  Score=166.86  Aligned_cols=192  Identities=15%  Similarity=0.171  Sum_probs=147.3

Q ss_pred             CCCCEEEEeCCCCchHHH--HHHHHHHcCCcEEEEecCC-HHH----------HHHHHHHHHHcCCcEEEEEccCCCHHH
Q 024338           24 VEAPVAVVTGASRGIGRA--VATSLGKAGCKVLVNYARS-SKE----------AEEVCKEIEASGGQALTFGGDVSKEAD   90 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~--~a~~l~~~G~~v~i~~~r~-~~~----------~~~~~~~l~~~~~~~~~~~~Dls~~~~   90 (269)
                      -.+|++||||+++|||.+  +|+.| ++|++++++.... +..          .+++.+.+.+.+.....+.||+++.++
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~  117 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI  117 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence            356999999999999999  89999 9999988753222 111          123444555556677889999999999


Q ss_pred             HHHHHHHHHHhcCCccEEEEccCCCCCCc-----------------cc-----------------CCCHHHHHHHHHHHh
Q 024338           91 VESMIKTAVDAWGTVDILINNAGITRDTL-----------------LM-----------------RMKKSQWQDVIDLNL  136 (269)
Q Consensus        91 ~~~~~~~~~~~~~~id~li~~ag~~~~~~-----------------~~-----------------~~~~~~~~~~~~~n~  136 (269)
                      ++++++++.+.+|+||+||||+|......                 +.                 ..+.++++..+++.=
T Consensus       118 v~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~Tv~vMg  197 (398)
T PRK13656        118 KQKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADTVKVMG  197 (398)
T ss_pred             HHHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHHHHhhc
Confidence            99999999999999999999999763211                 11                 234455555544432


Q ss_pred             H---HHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCC--hhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccC
Q 024338          137 T---GVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQ--ANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIAS  211 (269)
Q Consensus       137 ~---~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~--~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t  211 (269)
                      .   -.|.=.+...+.|  ..++++|.+|++.+.+..|.+  +.-+.+|++|+.-++.|+.++++.|+|+|++.+|++.|
T Consensus       198 gedw~~Wi~al~~a~ll--a~g~~~va~TY~G~~~t~p~Y~~g~mG~AKa~LE~~~r~La~~L~~~giran~i~~g~~~T  275 (398)
T PRK13656        198 GEDWELWIDALDEAGVL--AEGAKTVAYSYIGPELTHPIYWDGTIGKAKKDLDRTALALNEKLAAKGGDAYVSVLKAVVT  275 (398)
T ss_pred             cchHHHHHHHHHhcccc--cCCcEEEEEecCCcceeecccCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccc
Confidence            2   1133344455556  467899999999999888877  58999999999999999999999999999999999999


Q ss_pred             CcccccC
Q 024338          212 DMTAKLG  218 (269)
Q Consensus       212 ~~~~~~~  218 (269)
                      ......+
T Consensus       276 ~Ass~Ip  282 (398)
T PRK13656        276 QASSAIP  282 (398)
T ss_pred             hhhhcCC
Confidence            8665543

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.88  E-value=5.5e-21  Score=161.51  Aligned_cols=219  Identities=20%  Similarity=0.214  Sum_probs=163.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHH--HHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEE--VCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~--~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      .+++|+||||+|.||..+++.|+++|+.|..+ .|+++..+.  .+.+++....+...+..|++|+++++++++      
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gt-VR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~------   77 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGT-VRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAID------   77 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEE-EcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHh------
Confidence            68999999999999999999999999999996 566555332  466666556679999999999999999998      


Q ss_pred             CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCC-CC---------
Q 024338          103 GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGN-IG---------  172 (269)
Q Consensus       103 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~-~~---------  172 (269)
                       ++|+|+|.|........   +  .-.++++..+.|+.++++++...   +...|||++||.++.... +.         
T Consensus        78 -gcdgVfH~Asp~~~~~~---~--~e~~li~pav~Gt~nVL~ac~~~---~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE  148 (327)
T KOG1502|consen   78 -GCDGVFHTASPVDFDLE---D--PEKELIDPAVKGTKNVLEACKKT---KSVKRVVYTSSTAAVRYNGPNIGENSVVDE  148 (327)
T ss_pred             -CCCEEEEeCccCCCCCC---C--cHHhhhhHHHHHHHHHHHHHhcc---CCcceEEEeccHHHhccCCcCCCCCccccc
Confidence             79999999986554321   1  33478999999999999998752   246899999999987654 11         


Q ss_pred             --C----------hhhHHhHHHHHHHHHHHHHHhccC-CeEEEEEecCCccCCcccccChH---HHHHHHhc-CC-----
Q 024338          173 --Q----------ANYSAAKAGVIGLTKTVAKEYASR-NINVNAIAPGFIASDMTAKLGED---LEKKILEK-IP-----  230 (269)
Q Consensus       173 --~----------~~Y~~sK~al~~~~~~la~e~~~~-gi~v~~v~pG~v~t~~~~~~~~~---~~~~~~~~-~~-----  230 (269)
                        |          ..|+.||.    +++..|.+++++ |+...+|+|++|-.|...+..+.   ..-.+.++ ..     
T Consensus       149 ~~wsd~~~~~~~~~~Y~~sK~----lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~n~  224 (327)
T KOG1502|consen  149 ESWSDLDFCRCKKLWYALSKT----LAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYPNF  224 (327)
T ss_pred             ccCCcHHHHHhhHHHHHHHHH----HHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccCCCC
Confidence              1          24899999    555555555444 69999999999999976653221   11122222 11     


Q ss_pred             CCCCCCHHHHHHHHHHhccCCCCCCccccEEEecCC
Q 024338          231 LGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGG  266 (269)
Q Consensus       231 ~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg  266 (269)
                      ...+.+++|+|.+.+++...+.+   .|++|.++..
T Consensus       225 ~~~~VdVrDVA~AHv~a~E~~~a---~GRyic~~~~  257 (327)
T KOG1502|consen  225 WLAFVDVRDVALAHVLALEKPSA---KGRYICVGEV  257 (327)
T ss_pred             ceeeEeHHHHHHHHHHHHcCccc---CceEEEecCc
Confidence            11256899999999999977655   4888887654

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.88  E-value=1.3e-20  Score=163.81  Aligned_cols=220  Identities=20%  Similarity=0.196  Sum_probs=154.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHH--cCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEA--SGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~--~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      -+||++|||||+|+||.+++++|+++|++|+++ .|+....+.+......  ...++.++.+|++|.+++.++++     
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   76 (322)
T PLN02986          3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKAT-VRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE-----   76 (322)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE-ECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh-----
Confidence            568999999999999999999999999998874 5554433333222211  12468889999999998888876     


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcccc-CCC---------
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLV-GNI---------  171 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~-~~~---------  171 (269)
                        ++|+|||+|+.....     ..+...+.+++|+.++.++++++...   .+.++||++||..+.. +.+         
T Consensus        77 --~~d~vih~A~~~~~~-----~~~~~~~~~~~nv~gt~~ll~~~~~~---~~v~rvV~~SS~~~~~~~~~~~~~~~~~~  146 (322)
T PLN02986         77 --GCDAVFHTASPVFFT-----VKDPQTELIDPALKGTINVLNTCKET---PSVKRVILTSSTAAVLFRQPPIEANDVVD  146 (322)
T ss_pred             --CCCEEEEeCCCcCCC-----CCCchhhhhHHHHHHHHHHHHHHHhc---CCccEEEEecchhheecCCccCCCCCCcC
Confidence              689999999864321     11234568999999999988876531   2346999999986531 110         


Q ss_pred             ------------CChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc---ChHHHHHHHhcCC-----C
Q 024338          172 ------------GQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL---GEDLEKKILEKIP-----L  231 (269)
Q Consensus       172 ------------~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~---~~~~~~~~~~~~~-----~  231 (269)
                                  ....|+.||.+.+.+++.+..++   |+++++++|+.+.+|.....   ..........+.+     .
T Consensus       147 E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~---~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~  223 (322)
T PLN02986        147 ETFFSDPSLCRETKNWYPLSKILAENAAWEFAKDN---GIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNLFNNRF  223 (322)
T ss_pred             cccCCChHHhhccccchHHHHHHHHHHHHHHHHHh---CCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCCCCCcC
Confidence                        13569999998888888776654   89999999999999865432   1222222222221     1


Q ss_pred             CCCCCHHHHHHHHHHhccCCCCCCccccEEEecCC
Q 024338          232 GRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGG  266 (269)
Q Consensus       232 ~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg  266 (269)
                      +.+.+++|+|++++.++..+..    ++.++++|+
T Consensus       224 ~~~v~v~Dva~a~~~al~~~~~----~~~yni~~~  254 (322)
T PLN02986        224 YRFVDVRDVALAHIKALETPSA----NGRYIIDGP  254 (322)
T ss_pred             cceeEHHHHHHHHHHHhcCccc----CCcEEEecC
Confidence            3467899999999999865432    346777654

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.86  E-value=8.5e-20  Score=160.73  Aligned_cols=223  Identities=16%  Similarity=0.098  Sum_probs=157.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHH--HHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKE--AEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~--~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      |++|||||+|+||.++++.|.++|+.++++.++....  ...+. .+ ....++.++.+|++|.+++++++++.     +
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~   74 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLA-PV-AQSERFAFEKVDICDRAELARVFTEH-----Q   74 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhh-hc-ccCCceEEEECCCcChHHHHHHHhhc-----C
Confidence            6799999999999999999999998866544544221  11111 11 11245778899999999998888752     6


Q ss_pred             ccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHH---h--CCCCeEEEEcCCcccc-----------
Q 024338          105 VDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMM---K--KKKGRIINIASVVGLV-----------  168 (269)
Q Consensus       105 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~---~--~~~~~iv~isS~~~~~-----------  168 (269)
                      +|+|||+||....    ..+.+..+..+++|+.++..+++++.+.+.   .  ++..++|++||...+-           
T Consensus        75 ~D~Vih~A~~~~~----~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E  150 (355)
T PRK10217         75 PDCVMHLAAESHV----DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTE  150 (355)
T ss_pred             CCEEEECCcccCc----chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCC
Confidence            9999999986532    223456789999999999999999987542   1  2235899999964321           


Q ss_pred             --CCCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccc--cChHHHHHHHhcC--C-------CCCCC
Q 024338          169 --GNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAK--LGEDLEKKILEKI--P-------LGRYG  235 (269)
Q Consensus       169 --~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~--~~~~~~~~~~~~~--~-------~~~~~  235 (269)
                        +..+...|+.||.+.+.+++.++.++   ++++..+.|+.+..|....  ....+......+.  +       .+.+.
T Consensus       151 ~~~~~p~s~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i  227 (355)
T PRK10217        151 TTPYAPSSPYSASKASSDHLVRAWLRTY---GLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWL  227 (355)
T ss_pred             CCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCeeeCcC
Confidence              22346689999999999999987765   6888889999888875321  1122323222221  1       12467


Q ss_pred             CHHHHHHHHHHhccCCCCCCccccEEEecCCc
Q 024338          236 QPEEVAGLVEFLALNPAAGYITGQVLTIDGGM  267 (269)
Q Consensus       236 ~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg~  267 (269)
                      .++|+++++..++..+    ..|+++++.+|.
T Consensus       228 ~v~D~a~a~~~~~~~~----~~~~~yni~~~~  255 (355)
T PRK10217        228 YVEDHARALYCVATTG----KVGETYNIGGHN  255 (355)
T ss_pred             cHHHHHHHHHHHHhcC----CCCCeEEeCCCC
Confidence            8999999999887542    247888887664

>PLN02583 cinnamoyl-CoA reductase

Probab=99.86  E-value=6.8e-20  Score=157.53  Aligned_cols=206  Identities=13%  Similarity=0.051  Sum_probs=144.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCH--HHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSS--KEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~--~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      ++|++|||||+|+||.+++++|+++|++|+++ .|+.  ....+....+...+.++.++.+|++|.+++.+++.      
T Consensus         5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~-~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~------   77 (297)
T PLN02583          5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAA-VQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALK------   77 (297)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEE-EcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHc------
Confidence            57899999999999999999999999999885 4532  22323333332223468889999999998876664      


Q ss_pred             CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCC-C----------
Q 024338          103 GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGN-I----------  171 (269)
Q Consensus       103 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~-~----------  171 (269)
                       .+|.++|.++....     .. ..+++.+++|+.+++++++++.+.+   ..++||++||..+.... +          
T Consensus        78 -~~d~v~~~~~~~~~-----~~-~~~~~~~~~nv~gt~~ll~aa~~~~---~v~riV~~SS~~a~~~~~~~~~~~~~~~E  147 (297)
T PLN02583         78 -GCSGLFCCFDPPSD-----YP-SYDEKMVDVEVRAAHNVLEACAQTD---TIEKVVFTSSLTAVIWRDDNISTQKDVDE  147 (297)
T ss_pred             -CCCEEEEeCccCCc-----cc-ccHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEecchHheecccccCCCCCCCCc
Confidence             68999987653221     11 2467899999999999999998743   34799999998764211 0          


Q ss_pred             -CC----------hhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCC--CCCCCCHH
Q 024338          172 -GQ----------ANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIP--LGRYGQPE  238 (269)
Q Consensus       172 -~~----------~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~  238 (269)
                       .+          ..|+.||...+.+++.++.+   .|+++++++|+.+.+|........... .....+  ...+.+++
T Consensus       148 ~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~---~gi~~v~lrp~~v~Gp~~~~~~~~~~~-~~~~~~~~~~~~v~V~  223 (297)
T PLN02583        148 RSWSDQNFCRKFKLWHALAKTLSEKTAWALAMD---RGVNMVSINAGLLMGPSLTQHNPYLKG-AAQMYENGVLVTVDVN  223 (297)
T ss_pred             ccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHH---hCCcEEEEcCCcccCCCCCCchhhhcC-CcccCcccCcceEEHH
Confidence             00          15999999888888777654   389999999999999864322111000 000001  11366899


Q ss_pred             HHHHHHHHhccCC
Q 024338          239 EVAGLVEFLALNP  251 (269)
Q Consensus       239 ~~a~~~~~l~~~~  251 (269)
                      |+|++++..+..+
T Consensus       224 Dva~a~~~al~~~  236 (297)
T PLN02583        224 FLVDAHIRAFEDV  236 (297)
T ss_pred             HHHHHHHHHhcCc
Confidence            9999999998644

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.86  E-value=5.1e-20  Score=161.23  Aligned_cols=229  Identities=14%  Similarity=0.056  Sum_probs=151.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHH-----HHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHH
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSK-----EAEEVCKEIEASGGQALTFGGDVSKEADVESMIKT   97 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~-----~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~   97 (269)
                      ++++|++|||||+|+||.+++++|+++|++|+++. |+.+     .++.+.......+.++.++.+|++|.+++.+++++
T Consensus         3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   81 (340)
T PLN02653          3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGII-RRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDD   81 (340)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEe-cccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHH
Confidence            57789999999999999999999999999999864 4332     12222111111134688899999999999998886


Q ss_pred             HHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCeEEEEcCCcccc--------
Q 024338           98 AVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK-KGRIINIASVVGLV--------  168 (269)
Q Consensus        98 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~--------  168 (269)
                      .     .+|+|||+|+.....    ...+..+..+++|+.++..+++++.+...+++ ..++|++||...+-        
T Consensus        82 ~-----~~d~Vih~A~~~~~~----~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~E  152 (340)
T PLN02653         82 I-----KPDEVYNLAAQSHVA----VSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPPQSE  152 (340)
T ss_pred             c-----CCCEEEECCcccchh----hhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCCCCC
Confidence            4     589999999975432    12234577789999999999999988764321 13788888753221        


Q ss_pred             --CCCCChhhHHhHHHHHHHHHHHHHHhcc---CCeEEEEEecCCccCCcccccChHHHHHHHhcC----------CCCC
Q 024338          169 --GNIGQANYSAAKAGVIGLTKTVAKEYAS---RNINVNAIAPGFIASDMTAKLGEDLEKKILEKI----------PLGR  233 (269)
Q Consensus       169 --~~~~~~~Y~~sK~al~~~~~~la~e~~~---~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~----------~~~~  233 (269)
                        +..+...|+.||.+.+.++++++.++.-   .++.++.+.|+...+.+ ......+......+.          ..+.
T Consensus       153 ~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~g~~~rd  231 (340)
T PLN02653        153 TTPFHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFV-TRKITRAVGRIKVGLQKKLFLGNLDASRD  231 (340)
T ss_pred             CCCCCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccc-hhHHHHHHHHHHcCCCCceEeCCCcceec
Confidence              1124568999999999999999887642   13344555565332211 111111111221211          1235


Q ss_pred             CCCHHHHHHHHHHhccCCCCCCccccEEEecCCc
Q 024338          234 YGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM  267 (269)
Q Consensus       234 ~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg~  267 (269)
                      +..++|+|++++.++...     .++.+++.+|.
T Consensus       232 ~i~v~D~a~a~~~~~~~~-----~~~~yni~~g~  260 (340)
T PLN02653        232 WGFAGDYVEAMWLMLQQE-----KPDDYVVATEE  260 (340)
T ss_pred             ceeHHHHHHHHHHHHhcC-----CCCcEEecCCC
Confidence            668999999999998542     13567776553

>PLN02214 cinnamoyl-CoA reductase

Probab=99.86  E-value=2.2e-19  Score=157.35  Aligned_cols=205  Identities=16%  Similarity=0.153  Sum_probs=147.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHH-HHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAE-EVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~-~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      .+++|++|||||+|+||.+++++|+++|++|+++ .|+.+... .....+.....++.++.+|++|.+++.++++     
T Consensus         7 ~~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----   80 (342)
T PLN02214          7 SPAGKTVCVTGAGGYIASWIVKILLERGYTVKGT-VRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAID-----   80 (342)
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEE-eCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHh-----
Confidence            3568999999999999999999999999999885 56544322 2222332222457889999999998888776     


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCC----C------
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGN----I------  171 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~----~------  171 (269)
                        ++|+|||+|+...         +..++.+++|+.++.++++++.+    .+.+++|++||..+..+.    +      
T Consensus        81 --~~d~Vih~A~~~~---------~~~~~~~~~nv~gt~~ll~aa~~----~~v~r~V~~SS~~avyg~~~~~~~~~~~E  145 (342)
T PLN02214         81 --GCDGVFHTASPVT---------DDPEQMVEPAVNGAKFVINAAAE----AKVKRVVITSSIGAVYMDPNRDPEAVVDE  145 (342)
T ss_pred             --cCCEEEEecCCCC---------CCHHHHHHHHHHHHHHHHHHHHh----cCCCEEEEeccceeeeccCCCCCCcccCc
Confidence              6899999998542         23567899999999999888754    445699999997544321    0      


Q ss_pred             -----------CChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccCh----HHHHHHHhcCC-----C
Q 024338          172 -----------GQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGE----DLEKKILEKIP-----L  231 (269)
Q Consensus       172 -----------~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~----~~~~~~~~~~~-----~  231 (269)
                                 ....|+.||.+.+.+++.++.++   |+++..++|+.+..|.......    .....+....+     .
T Consensus       146 ~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~---g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~  222 (342)
T PLN02214        146 SCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEK---GVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLT  222 (342)
T ss_pred             ccCCChhhccccccHHHHHHHHHHHHHHHHHHHc---CCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccCCCCC
Confidence                       22469999999999888776654   8999999999999986432111    11111111111     1


Q ss_pred             CCCCCHHHHHHHHHHhccCC
Q 024338          232 GRYGQPEEVAGLVEFLALNP  251 (269)
Q Consensus       232 ~~~~~~~~~a~~~~~l~~~~  251 (269)
                      +.+..++|+|++++.++..+
T Consensus       223 ~~~i~V~Dva~a~~~al~~~  242 (342)
T PLN02214        223 QAYVDVRDVALAHVLVYEAP  242 (342)
T ss_pred             cCeeEHHHHHHHHHHHHhCc
Confidence            24568999999999988543

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.86  E-value=3.5e-19  Score=156.79  Aligned_cols=213  Identities=17%  Similarity=0.153  Sum_probs=150.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      +.+++++|||||+|+||.+++++|+++|++|+++ .|+.+....+...+.. ..++.++.+|++|.++++++++      
T Consensus         7 ~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~-~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~------   78 (353)
T PLN02896          7 ESATGTYCVTGATGYIGSWLVKLLLQRGYTVHAT-LRDPAKSLHLLSKWKE-GDRLRLFRADLQEEGSFDEAVK------   78 (353)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE-eCChHHHHHHHHhhcc-CCeEEEEECCCCCHHHHHHHHc------
Confidence            3467899999999999999999999999999885 6666655555444432 4568889999999998887765      


Q ss_pred             CCccEEEEccCCCCCCc-ccCCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCC---------
Q 024338          103 GTVDILINNAGITRDTL-LMRMKKSQW--QDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGN---------  170 (269)
Q Consensus       103 ~~id~li~~ag~~~~~~-~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~---------  170 (269)
                       ++|+|||+|+...... ....+.+.+  ...++.|+.++..+++++.+.   ...+++|++||...+...         
T Consensus        79 -~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~  154 (353)
T PLN02896         79 -GCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKS---KTVKRVVFTSSISTLTAKDSNGRWRAV  154 (353)
T ss_pred             -CCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhc---CCccEEEEEechhhccccccCCCCCCc
Confidence             5899999999754321 112222222  456778889999998887653   235699999997654211         


Q ss_pred             ----------------CCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHh---c-CC
Q 024338          171 ----------------IGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILE---K-IP  230 (269)
Q Consensus       171 ----------------~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~---~-~~  230 (269)
                                      +....|+.||.+.+.+++.++.++   |+++..+.|+.+.+|......+........   + ..
T Consensus       155 ~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~  231 (353)
T PLN02896        155 VDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKEN---GIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSK  231 (353)
T ss_pred             cCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCcc
Confidence                            112379999999999988777654   799999999999998643322222221111   1 00


Q ss_pred             -------------CCCCCCHHHHHHHHHHhccC
Q 024338          231 -------------LGRYGQPEEVAGLVEFLALN  250 (269)
Q Consensus       231 -------------~~~~~~~~~~a~~~~~l~~~  250 (269)
                                   .+.+..++|+|++++.++..
T Consensus       232 ~~~~~~~~~~~~~~~dfi~v~Dva~a~~~~l~~  264 (353)
T PLN02896        232 LFSILSAVNSRMGSIALVHIEDICDAHIFLMEQ  264 (353)
T ss_pred             ccccccccccccCceeEEeHHHHHHHHHHHHhC
Confidence                         11456899999999999854

>PRK06720 hypothetical protein; Provisional

Probab=99.85  E-value=1e-19  Score=143.18  Aligned_cols=143  Identities=27%  Similarity=0.404  Sum_probs=117.1

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      .+.+++|+++||||++|||.++++.|+++|++|+++ +++.+..++..+++...+.+..++.+|+++.++++++++++.+
T Consensus        11 ~~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~-~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~   89 (169)
T PRK06720         11 KMKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVT-DIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLN   89 (169)
T ss_pred             ccccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEE-ECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            466889999999999999999999999999998884 7777777777777765566777899999999999999999999


Q ss_pred             hcCCccEEEEccCCCCC-CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-------CCCeEEEEcCCccc
Q 024338          101 AWGTVDILINNAGITRD-TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKK-------KKGRIINIASVVGL  167 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-------~~~~iv~isS~~~~  167 (269)
                      .++++|++|||||.... .++.+.+.++ ++  ..|+.+.+..++.+.+.|.++       +.||+..|||.+.-
T Consensus        90 ~~G~iDilVnnAG~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (169)
T PRK06720         90 AFSRIDMLFQNAGLYKIDSIFSRQQEND-SN--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQS  161 (169)
T ss_pred             HcCCCCEEEECCCcCCCCCcccccchhH-hh--ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEecccccc
Confidence            99999999999998664 3444445444 33  677777788999999988764       35788888886543

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.85  E-value=5.9e-19  Score=157.14  Aligned_cols=224  Identities=18%  Similarity=0.182  Sum_probs=182.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHc--CCcEEEEEccCCCHHHHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS--GGQALTFGGDVSKEADVESMIKTAV   99 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dls~~~~~~~~~~~~~   99 (269)
                      ..++||++|||||+|.||.++++++++.+.+.+++.++++-.+-....++++.  ..++.++.+|+.|.+.++++++.. 
T Consensus       246 ~~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~-  324 (588)
T COG1086         246 AMLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGH-  324 (588)
T ss_pred             hHcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcC-
Confidence            35799999999999999999999999999888888899999888888888775  467889999999999999999854 


Q ss_pred             HhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHh
Q 024338          100 DAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAA  179 (269)
Q Consensus       100 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  179 (269)
                          ++|+|+|.|+.-+...    -+....+.+.+|++|+.++++++..    .+..++|.+|+..+..|.   ..||++
T Consensus       325 ----kvd~VfHAAA~KHVPl----~E~nP~Eai~tNV~GT~nv~~aa~~----~~V~~~V~iSTDKAV~Pt---NvmGaT  389 (588)
T COG1086         325 ----KVDIVFHAAALKHVPL----VEYNPEEAIKTNVLGTENVAEAAIK----NGVKKFVLISTDKAVNPT---NVMGAT  389 (588)
T ss_pred             ----CCceEEEhhhhccCcc----hhcCHHHHHHHhhHhHHHHHHHHHH----hCCCEEEEEecCcccCCc---hHhhHH
Confidence                6999999999765532    2345678999999999999999875    677899999999888764   679999


Q ss_pred             HHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCC--------CCCCCHHHHHHHHHHhccCC
Q 024338          180 KAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPL--------GRYGQPEEVAGLVEFLALNP  251 (269)
Q Consensus       180 K~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~a~~~~~l~~~~  251 (269)
                      |...+..+.+++......+-++.+|.-|-|-..... ..+-+.++..++-|.        +.+.+.+|.++.++....- 
T Consensus       390 Kr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGS-ViPlFk~QI~~GgplTvTdp~mtRyfMTI~EAv~LVlqA~a~-  467 (588)
T COG1086         390 KRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGS-VIPLFKKQIAEGGPLTVTDPDMTRFFMTIPEAVQLVLQAGAI-  467 (588)
T ss_pred             HHHHHHHHHHHhhccCCCCcEEEEEEecceecCCCC-CHHHHHHHHHcCCCccccCCCceeEEEEHHHHHHHHHHHHhh-
Confidence            999999999998877665789999999988766432 224455555555444        3456889999999988733 


Q ss_pred             CCCCccccEEEecCC
Q 024338          252 AAGYITGQVLTIDGG  266 (269)
Q Consensus       252 ~~~~~~G~~i~~dgg  266 (269)
                         .-.|+++..|-|
T Consensus       468 ---~~gGeifvldMG  479 (588)
T COG1086         468 ---AKGGEIFVLDMG  479 (588)
T ss_pred             ---cCCCcEEEEcCC
Confidence               356899999876

>PLN02650 dihydroflavonol-4-reductase

Probab=99.84  E-value=4.4e-19  Score=155.99  Aligned_cols=208  Identities=18%  Similarity=0.190  Sum_probs=148.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHc--CCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS--GGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      ..|++|||||+|.||.+++++|+++|++|+++ .|+.+....+.......  ..++.++.+|++|.+.+.++++      
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~------   76 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRAT-VRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR------   76 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEE-EcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh------
Confidence            46899999999999999999999999999885 56654444433222111  2357889999999988887775      


Q ss_pred             CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCC----C-------
Q 024338          103 GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGN----I-------  171 (269)
Q Consensus       103 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~----~-------  171 (269)
                       .+|+|||+|+.....     ..+..++.+++|+.++.++++++.+..   ..++||++||.....+.    +       
T Consensus        77 -~~d~ViH~A~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~aa~~~~---~~~r~v~~SS~~~~~~~~~~~~~~~E~~~  147 (351)
T PLN02650         77 -GCTGVFHVATPMDFE-----SKDPENEVIKPTVNGMLSIMKACAKAK---TVRRIVFTSSAGTVNVEEHQKPVYDEDCW  147 (351)
T ss_pred             -CCCEEEEeCCCCCCC-----CCCchhhhhhHHHHHHHHHHHHHHhcC---CceEEEEecchhhcccCCCCCCccCcccC
Confidence             589999999864321     112346789999999999999886531   24689999997543211    0       


Q ss_pred             -----------CChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc-ChHHHHHH--H-hc------CC
Q 024338          172 -----------GQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL-GEDLEKKI--L-EK------IP  230 (269)
Q Consensus       172 -----------~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-~~~~~~~~--~-~~------~~  230 (269)
                                 +...|+.||.+.+.+++.++.+   .|++++.+.|+.+.+|..... ...+....  . ..      ..
T Consensus       148 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (351)
T PLN02650        148 SDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAE---NGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEAHYSIIK  224 (351)
T ss_pred             CchhhhhccccccchHHHHHHHHHHHHHHHHHH---cCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCccccCcCC
Confidence                       1237999999999998887765   389999999999999864332 12122111  0 11      11


Q ss_pred             CCCCCCHHHHHHHHHHhccCC
Q 024338          231 LGRYGQPEEVAGLVEFLALNP  251 (269)
Q Consensus       231 ~~~~~~~~~~a~~~~~l~~~~  251 (269)
                      .+.+.+++|+|++++.++..+
T Consensus       225 ~r~~v~V~Dva~a~~~~l~~~  245 (351)
T PLN02650        225 QGQFVHLDDLCNAHIFLFEHP  245 (351)
T ss_pred             CcceeeHHHHHHHHHHHhcCc
Confidence            245779999999999998653

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.84  E-value=8.3e-19  Score=158.34  Aligned_cols=228  Identities=16%  Similarity=0.135  Sum_probs=155.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEec--CCHHH--------------HHHHHHHHHH-cCCcEEEEEcc
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYA--RSSKE--------------AEEVCKEIEA-SGGQALTFGGD   84 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~--r~~~~--------------~~~~~~~l~~-~~~~~~~~~~D   84 (269)
                      ..+++|++|||||+|+||++++++|+++|++|+++..  ++...              .+.+ +.+.+ .+.++.++.+|
T Consensus        43 ~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~v~~v~~D  121 (442)
T PLN02572         43 SSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERV-RRWKEVSGKEIELYVGD  121 (442)
T ss_pred             ccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHH-HHHHHhhCCcceEEECC
Confidence            4678899999999999999999999999999988531  21110              0111 11111 23468899999


Q ss_pred             CCCHHHHHHHHHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Q 024338           85 VSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASV  164 (269)
Q Consensus        85 ls~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~  164 (269)
                      ++|.+++.+++++.     ++|+|||+|+... .+....+.++++..+++|+.+++++++++...   ....++|++||.
T Consensus       122 l~d~~~v~~~l~~~-----~~D~ViHlAa~~~-~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~---gv~~~~V~~SS~  192 (442)
T PLN02572        122 ICDFEFLSEAFKSF-----EPDAVVHFGEQRS-APYSMIDRSRAVFTQHNNVIGTLNVLFAIKEF---APDCHLVKLGTM  192 (442)
T ss_pred             CCCHHHHHHHHHhC-----CCCEEEECCCccc-ChhhhcChhhHHHHHHHHHHHHHHHHHHHHHh---CCCccEEEEecc
Confidence            99999999988864     6899999997633 23334445567788999999999999887652   122489999997


Q ss_pred             cccc------------------------CCCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc---
Q 024338          165 VGLV------------------------GNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL---  217 (269)
Q Consensus       165 ~~~~------------------------~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~---  217 (269)
                      ..+-                        +..+...|+.||.+.+.+++..+..   .|+.+..+.|+.+..|.....   
T Consensus       193 ~vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~---~gl~~v~lR~~~vyGp~~~~~~~~  269 (442)
T PLN02572        193 GEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVRTDETMMD  269 (442)
T ss_pred             eecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHh---cCCCEEEEecccccCCCCcccccc
Confidence            5431                        1112357999999988888776654   489999999999998853210   


Q ss_pred             ----------------ChHHHHHHHhcCCC---------CCCCCHHHHHHHHHHhccCCCCCCccc--cEEEecC
Q 024338          218 ----------------GEDLEKKILEKIPL---------GRYGQPEEVAGLVEFLALNPAAGYITG--QVLTIDG  265 (269)
Q Consensus       218 ----------------~~~~~~~~~~~~~~---------~~~~~~~~~a~~~~~l~~~~~~~~~~G--~~i~~dg  265 (269)
                                      ...+......+.+.         +.+..++|++++++.++..+.   ..|  +++++.+
T Consensus       270 ~~li~~~~~~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~---~~g~~~i~Nigs  341 (442)
T PLN02572        270 EELINRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPA---KPGEFRVFNQFT  341 (442)
T ss_pred             cccccccCcccchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChh---hcCceeEEEeCC
Confidence                            01112222222221         256789999999999885321   134  4666643

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.84  E-value=7.6e-19  Score=153.71  Aligned_cols=208  Identities=20%  Similarity=0.204  Sum_probs=145.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHH--HHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVC--KEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~--~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      +++|++|||||+|+||.+++++|+++|++|+++ .|+.+......  ..+. ...++.++.+|++|.+++.++++     
T Consensus         7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~-----   79 (338)
T PLN00198          7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTT-VRDPENQKKIAHLRALQ-ELGDLKIFGADLTDEESFEAPIA-----   79 (338)
T ss_pred             CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEE-ECCCCCHHHHHHHHhcC-CCCceEEEEcCCCChHHHHHHHh-----
Confidence            457999999999999999999999999998774 45543322211  1121 11357889999999988887765     


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccC------------
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVG------------  169 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~------------  169 (269)
                        ++|+|||+|+....   .  ..+.....+++|+.++..+++++.+.   .+.+++|++||...+..            
T Consensus        80 --~~d~vih~A~~~~~---~--~~~~~~~~~~~nv~g~~~ll~a~~~~---~~~~~~v~~SS~~~~g~~~~~~~~~~~~E  149 (338)
T PLN00198         80 --GCDLVFHVATPVNF---A--SEDPENDMIKPAIQGVHNVLKACAKA---KSVKRVILTSSAAAVSINKLSGTGLVMNE  149 (338)
T ss_pred             --cCCEEEEeCCCCcc---C--CCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEeecceeeeccCCCCCCceecc
Confidence              68999999985321   1  12334567899999999999887652   23579999999865431            


Q ss_pred             ------------CCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHH---HHHHhc------
Q 024338          170 ------------NIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLE---KKILEK------  228 (269)
Q Consensus       170 ------------~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~---~~~~~~------  228 (269)
                                  .++...|+.||.+.+.+++.++.+   .|+++..+.|+.+.+|......+...   .....+      
T Consensus       150 ~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~  226 (338)
T PLN00198        150 KNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEE---NNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLIN  226 (338)
T ss_pred             ccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHh---cCceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCccccc
Confidence                        123456999999999988887665   38999999999999985432111111   111111      


Q ss_pred             ----CC----CCCCCCHHHHHHHHHHhccCC
Q 024338          229 ----IP----LGRYGQPEEVAGLVEFLALNP  251 (269)
Q Consensus       229 ----~~----~~~~~~~~~~a~~~~~l~~~~  251 (269)
                          .+    .+.+.+++|++++++.++..+
T Consensus       227 g~~~~~~~~~~~~~i~V~D~a~a~~~~~~~~  257 (338)
T PLN00198        227 GLKGMQMLSGSISITHVEDVCRAHIFLAEKE  257 (338)
T ss_pred             cccccccccCCcceeEHHHHHHHHHHHhhCc
Confidence                11    135678999999999988553

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.83  E-value=1.3e-18  Score=150.97  Aligned_cols=207  Identities=18%  Similarity=0.198  Sum_probs=144.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHH---cCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEA---SGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~---~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      ++|++|||||+|+||.+++++|+++|++|+++ .|+........ .+..   ...++.++.+|++|.+++.++++     
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKAT-VRDPNDPKKTE-HLLALDGAKERLHLFKANLLEEGSFDSVVD-----   75 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEE-EcCCCchhhHH-HHHhccCCCCceEEEeccccCcchHHHHHc-----
Confidence            47899999999999999999999999999875 45543322221 1211   12468889999999988887776     


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccc-c-CC---------
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGL-V-GN---------  170 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~-~-~~---------  170 (269)
                        ++|+|||+|+.....     ..+..+..+++|+.++..+++++...   .+.+++|++||..+. . +.         
T Consensus        76 --~~d~Vih~A~~~~~~-----~~~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~v~~SS~~~~~y~~~~~~~~~~~~  145 (322)
T PLN02662         76 --GCEGVFHTASPFYHD-----VTDPQAELIDPAVKGTLNVLRSCAKV---PSVKRVVVTSSMAAVAYNGKPLTPDVVVD  145 (322)
T ss_pred             --CCCEEEEeCCcccCC-----CCChHHHHHHHHHHHHHHHHHHHHhC---CCCCEEEEccCHHHhcCCCcCCCCCCcCC
Confidence              689999999864321     11223578999999999999887642   145699999997532 1 11         


Q ss_pred             ------C-----CChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC---hHHHHHHHhcC-----CC
Q 024338          171 ------I-----GQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG---EDLEKKILEKI-----PL  231 (269)
Q Consensus       171 ------~-----~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~---~~~~~~~~~~~-----~~  231 (269)
                            |     ....|+.+|.+.+.+++.+..+   .|++++.+.|+.+.+|......   .........+.     ..
T Consensus       146 E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (322)
T PLN02662        146 ETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKE---NGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQTFPNAS  222 (322)
T ss_pred             cccCCChhHhhcccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCccCCCCC
Confidence                  1     0147999999888887766554   3899999999999998643321   12222222111     12


Q ss_pred             CCCCCHHHHHHHHHHhccCC
Q 024338          232 GRYGQPEEVAGLVEFLALNP  251 (269)
Q Consensus       232 ~~~~~~~~~a~~~~~l~~~~  251 (269)
                      ..+..++|+|++++.++..+
T Consensus       223 ~~~i~v~Dva~a~~~~~~~~  242 (322)
T PLN02662        223 YRWVDVRDVANAHIQAFEIP  242 (322)
T ss_pred             cCeEEHHHHHHHHHHHhcCc
Confidence            34678999999999988654

>PLN02240 UDP-glucose 4-epimerase

Probab=99.82  E-value=4e-18  Score=149.84  Aligned_cols=230  Identities=14%  Similarity=0.071  Sum_probs=150.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHH----HHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKE----AEEVCKEIEASGGQALTFGGDVSKEADVESMIKT   97 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~----~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~   97 (269)
                      |.+.+|++|||||+|+||.+++++|+++|++|+++ +|....    ..+..+.......++.++.+|++|.+++++++++
T Consensus         1 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~   79 (352)
T PLN02240          1 MSLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVI-DNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAS   79 (352)
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEE-eCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHh
Confidence            45678999999999999999999999999998885 432211    1222221111234678899999999999888775


Q ss_pred             HHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcccc---------
Q 024338           98 AVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLV---------  168 (269)
Q Consensus        98 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~---------  168 (269)
                      .     ++|+|||+|+.....    .+.+...+.+++|+.++..+++++.    +.+.+++|++||...+.         
T Consensus        80 ~-----~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~E  146 (352)
T PLN02240         80 T-----RFDAVIHFAGLKAVG----ESVAKPLLYYDNNLVGTINLLEVMA----KHGCKKLVFSSSATVYGQPEEVPCTE  146 (352)
T ss_pred             C-----CCCEEEEccccCCcc----ccccCHHHHHHHHHHHHHHHHHHHH----HcCCCEEEEEccHHHhCCCCCCCCCC
Confidence            2     799999999965322    1234567899999999988887553    34557999999964321         


Q ss_pred             --CCCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcc--------cccCh---HHHHHHH-hcC-C---
Q 024338          169 --GNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMT--------AKLGE---DLEKKIL-EKI-P---  230 (269)
Q Consensus       169 --~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~--------~~~~~---~~~~~~~-~~~-~---  230 (269)
                        +..+...|+.||.+.+.+++.++.+.  .++.+..+.|+.+..+..        .....   .+..... .+. +   
T Consensus       147 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (352)
T PLN02240        147 EFPLSATNPYGRTKLFIEEICRDIHASD--PEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTV  224 (352)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHhc--CCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEE
Confidence              11245689999999999998887542  357777777765544311        00111   1112221 111 0   


Q ss_pred             ------------CCCCCCHHHHHHHHHHhccCC-CCCCccccEEEecCCc
Q 024338          231 ------------LGRYGQPEEVAGLVEFLALNP-AAGYITGQVLTIDGGM  267 (269)
Q Consensus       231 ------------~~~~~~~~~~a~~~~~l~~~~-~~~~~~G~~i~~dgg~  267 (269)
                                  .+.+..++|+|++++.++... ......|+++++.+|.
T Consensus       225 ~g~~~~~~~g~~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~  274 (352)
T PLN02240        225 FGNDYPTKDGTGVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGK  274 (352)
T ss_pred             eCCCCCCCCCCEEEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccCCC
Confidence                        113457999999988776432 1112346888886653

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.82  E-value=8.2e-18  Score=147.80  Aligned_cols=227  Identities=14%  Similarity=0.043  Sum_probs=154.6

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHH-----cCCcEEEEEccCCCHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEA-----SGGQALTFGGDVSKEADVESMI   95 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~-----~~~~~~~~~~Dls~~~~~~~~~   95 (269)
                      ...+++|++|||||+|.||.+++++|.++|++|+++. |..............     ...++.++.+|+.|.+++.+++
T Consensus        10 ~~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~   88 (348)
T PRK15181         10 KLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLD-NFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKAC   88 (348)
T ss_pred             cccccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEe-CCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHh
Confidence            3567789999999999999999999999999998854 432211111111111     1135788999999988877776


Q ss_pred             HHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCC-----
Q 024338           96 KTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGN-----  170 (269)
Q Consensus        96 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~-----  170 (269)
                      +       .+|+|||.|+......    ..++....+++|+.++.++++++..    .+..++|++||...+-..     
T Consensus        89 ~-------~~d~ViHlAa~~~~~~----~~~~~~~~~~~Nv~gt~nll~~~~~----~~~~~~v~~SS~~vyg~~~~~~~  153 (348)
T PRK15181         89 K-------NVDYVLHQAALGSVPR----SLKDPIATNSANIDGFLNMLTAARD----AHVSSFTYAASSSTYGDHPDLPK  153 (348)
T ss_pred             h-------CCCEEEECccccCchh----hhhCHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEeechHhhCCCCCCCC
Confidence            5       5899999999653211    1223456799999998888887743    455699999987543211     


Q ss_pred             ------CCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc------ChHHHHHHHhcCCC-------
Q 024338          171 ------IGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL------GEDLEKKILEKIPL-------  231 (269)
Q Consensus       171 ------~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~------~~~~~~~~~~~~~~-------  231 (269)
                            .+...|+.||.+.+.+++.++..   .|+++..+.|+.+..|.....      .+.+......+.+.       
T Consensus       154 ~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~  230 (348)
T PRK15181        154 IEERIGRPLSPYAVTKYVNELYADVFARS---YEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGS  230 (348)
T ss_pred             CCCCCCCCCChhhHHHHHHHHHHHHHHHH---hCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCC
Confidence                  13457999999999888776554   389999999999999854321      23333333322221       


Q ss_pred             --CCCCCHHHHHHHHHHhccCCCCCCccccEEEecCCc
Q 024338          232 --GRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM  267 (269)
Q Consensus       232 --~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg~  267 (269)
                        +.+..++|+|++++.++.... ....|+++++.+|.
T Consensus       231 ~~rd~i~v~D~a~a~~~~~~~~~-~~~~~~~yni~~g~  267 (348)
T PRK15181        231 TSRDFCYIENVIQANLLSATTND-LASKNKVYNVAVGD  267 (348)
T ss_pred             ceEeeEEHHHHHHHHHHHHhccc-ccCCCCEEEecCCC
Confidence              234579999999887663321 12357889987653

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.81  E-value=3.9e-18  Score=149.57  Aligned_cols=223  Identities=15%  Similarity=0.105  Sum_probs=142.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHH-----HHHHHHHHHH-HcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSK-----EAEEVCKEIE-ASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~-----~~~~~~~~l~-~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      |++|||||+|+||.+++++|+++|++|+++ .|+.+     ....+.+... ..+.++.++.+|++|.+++.++++..  
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~--   77 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGL-IRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI--   77 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEE-ecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC--
Confidence            689999999999999999999999999885 45432     2222211111 01245788999999999999888864  


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcccc-----------C
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLV-----------G  169 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~-----------~  169 (269)
                         ++|+|||+|+......    ..+.-...+++|+.++..+++++.+.-. ++..++|++||...+-           +
T Consensus        78 ---~~d~ViH~Aa~~~~~~----~~~~~~~~~~~n~~gt~~ll~a~~~~~~-~~~~~~v~~SS~~vyg~~~~~~~~E~~~  149 (343)
T TIGR01472        78 ---KPTEIYNLAAQSHVKV----SFEIPEYTADVDGIGTLRLLEAVRTLGL-IKSVKFYQASTSELYGKVQEIPQNETTP  149 (343)
T ss_pred             ---CCCEEEECCcccccch----hhhChHHHHHHHHHHHHHHHHHHHHhCC-CcCeeEEEeccHHhhCCCCCCCCCCCCC
Confidence               5899999999754321    1223356778999999999998876311 1224899999964321           1


Q ss_pred             CCCChhhHHhHHHHHHHHHHHHHHhccC---CeEEEEEecCCccCCcccccChHHHHHHHhc----------CCCCCCCC
Q 024338          170 NIGQANYSAAKAGVIGLTKTVAKEYASR---NINVNAIAPGFIASDMTAKLGEDLEKKILEK----------IPLGRYGQ  236 (269)
Q Consensus       170 ~~~~~~Y~~sK~al~~~~~~la~e~~~~---gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~----------~~~~~~~~  236 (269)
                      ..+...|+.||.+.+.+++.++.++.-.   ++.++...|+.-.. ...............+          ...+.+..
T Consensus       150 ~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~  228 (343)
T TIGR01472       150 FYPRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGEN-FVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGH  228 (343)
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCcc-ccchHHHHHHHHHHcCCCCceeeCCCccccCcee
Confidence            2245689999999999999988775221   12223333432111 1111111222222211          12235678


Q ss_pred             HHHHHHHHHHhccCCCCCCccccEEEecCC
Q 024338          237 PEEVAGLVEFLALNPAAGYITGQVLTIDGG  266 (269)
Q Consensus       237 ~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg  266 (269)
                      ++|+|++++.++..+.     +..+++.+|
T Consensus       229 V~D~a~a~~~~~~~~~-----~~~yni~~g  253 (343)
T TIGR01472       229 AKDYVEAMWLMLQQDK-----PDDYVIATG  253 (343)
T ss_pred             HHHHHHHHHHHHhcCC-----CccEEecCC
Confidence            9999999998885431     246777655

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.81  E-value=9.3e-18  Score=145.01  Aligned_cols=218  Identities=17%  Similarity=0.151  Sum_probs=150.5

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcC--CcEEEEecCCH--HHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           28 VAVVTGASRGIGRAVATSLGKAG--CKVLVNYARSS--KEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G--~~v~i~~~r~~--~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      ++|||||+|+||.+++++|+++|  .+|+++ .|..  ...+.+ +.+.. ..++.++.+|++|.+++.++++..     
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~-~~~~~~~~~~~~-~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~-----   72 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVL-DKLTYAGNLENL-ADLED-NPRYRFVKGDIGDRELVSRLFTEH-----   72 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEe-cCCCcchhhhhh-hhhcc-CCCcEEEEcCCcCHHHHHHHHhhc-----
Confidence            48999999999999999999987  677664 3321  111111 22211 236778899999999998888743     


Q ss_pred             CccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccC------------CC
Q 024338          104 TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVG------------NI  171 (269)
Q Consensus       104 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~------------~~  171 (269)
                      ++|+|||+|+.....    ...+..+..+++|+.++..+++++.+.+   .+.++|++||...+-.            ..
T Consensus        73 ~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~  145 (317)
T TIGR01181        73 QPDAVVHFAAESHVD----RSISGPAAFIETNVVGTYTLLEAVRKYW---HEFRFHHISTDEVYGDLEKGDAFTETTPLA  145 (317)
T ss_pred             CCCEEEEcccccCch----hhhhCHHHHHHHHHHHHHHHHHHHHhcC---CCceEEEeeccceeCCCCCCCCcCCCCCCC
Confidence            599999999865421    2334567889999999999988776532   2348999998643211            12


Q ss_pred             CChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccc--cChHHHHHHHhcCCC---------CCCCCHHHH
Q 024338          172 GQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAK--LGEDLEKKILEKIPL---------GRYGQPEEV  240 (269)
Q Consensus       172 ~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~--~~~~~~~~~~~~~~~---------~~~~~~~~~  240 (269)
                      +...|+.+|.+.+.+++.++.+.   ++++..+.|+.+..+....  ..+........+.+.         ..+.+++|+
T Consensus       146 ~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~  222 (317)
T TIGR01181       146 PSSPYSASKAASDHLVRAYHRTY---GLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDH  222 (317)
T ss_pred             CCCchHHHHHHHHHHHHHHHHHh---CCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHH
Confidence            34579999999999999887664   7899999999998875321  222233333322211         124578999


Q ss_pred             HHHHHHhccCCCCCCccccEEEecCCc
Q 024338          241 AGLVEFLALNPAAGYITGQVLTIDGGM  267 (269)
Q Consensus       241 a~~~~~l~~~~~~~~~~G~~i~~dgg~  267 (269)
                      ++++..++...    ..|+++++.++.
T Consensus       223 a~~~~~~~~~~----~~~~~~~~~~~~  245 (317)
T TIGR01181       223 CRAIYLVLEKG----RVGETYNIGGGN  245 (317)
T ss_pred             HHHHHHHHcCC----CCCceEEeCCCC
Confidence            99999998532    357888886653

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.80  E-value=5.6e-18  Score=144.11  Aligned_cols=217  Identities=21%  Similarity=0.231  Sum_probs=151.8

Q ss_pred             EEeCCCCchHHHHHHHHHHcC--CcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCccE
Q 024338           30 VVTGASRGIGRAVATSLGKAG--CKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDI  107 (269)
Q Consensus        30 lItGas~giG~~~a~~l~~~G--~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~  107 (269)
                      |||||+|.||.+++++|+++|  ..|.++ .+......  ...+.. .....++.+|++|.+++.++++       +.|+
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~-d~~~~~~~--~~~~~~-~~~~~~~~~Di~d~~~l~~a~~-------g~d~   69 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVL-DRSPPPKF--LKDLQK-SGVKEYIQGDITDPESLEEALE-------GVDV   69 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEc-cccccccc--chhhhc-ccceeEEEeccccHHHHHHHhc-------CCce
Confidence            699999999999999999999  677764 34332211  111211 1223389999999999999887       7899


Q ss_pred             EEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccC---C--------------
Q 024338          108 LINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVG---N--------------  170 (269)
Q Consensus       108 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~---~--------------  170 (269)
                      |||+|+......     ....+.++++|+.|+-++++++..    .+..++|++||.....+   .              
T Consensus        70 V~H~Aa~~~~~~-----~~~~~~~~~vNV~GT~nvl~aa~~----~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~  140 (280)
T PF01073_consen   70 VFHTAAPVPPWG-----DYPPEEYYKVNVDGTRNVLEAARK----AGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPS  140 (280)
T ss_pred             EEEeCccccccC-----cccHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEcCcceeEeccCCCCcccCCcCCcccc
Confidence            999999754321     345688999999998888887764    56789999999987544   0              


Q ss_pred             CCChhhHHhHHHHHHHHHHHHH-Hhcc-CCeEEEEEecCCccCCcccccChHHHHHHHhcC---CCC------CCCCHHH
Q 024338          171 IGQANYSAAKAGVIGLTKTVAK-EYAS-RNINVNAIAPGFIASDMTAKLGEDLEKKILEKI---PLG------RYGQPEE  239 (269)
Q Consensus       171 ~~~~~Y~~sK~al~~~~~~la~-e~~~-~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~---~~~------~~~~~~~  239 (269)
                      .....|+.||+..+.++..... +..+ ..++..+|+|..|..|......+...+....+.   ..+      .+.++++
T Consensus       141 ~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~N  220 (280)
T PF01073_consen  141 SPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKMVRSGLFLFQIGDGNNLFDFVYVEN  220 (280)
T ss_pred             cccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccchhhHHHHhcccceeecCCCceECcEeHHH
Confidence            1334799999988888776543 1111 259999999999999975555554444433331   111      2457999


Q ss_pred             HHHHHHHhcc---CC-CCCCccccEEEecCC
Q 024338          240 VAGLVEFLAL---NP-AAGYITGQVLTIDGG  266 (269)
Q Consensus       240 ~a~~~~~l~~---~~-~~~~~~G~~i~~dgg  266 (269)
                      +|++.+-.+.   ++ ......||.+.+..+
T Consensus       221 vA~ahvlA~~~L~~~~~~~~~~G~~y~itd~  251 (280)
T PF01073_consen  221 VAHAHVLAAQALLEPGKPERVAGQAYFITDG  251 (280)
T ss_pred             HHHHHHHHHHHhccccccccCCCcEEEEECC
Confidence            9998876432   11 124578999887655

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.80  E-value=1.3e-17  Score=146.58  Aligned_cols=221  Identities=18%  Similarity=0.158  Sum_probs=151.1

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCH--HHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSS--KEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTV  105 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~--~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i  105 (269)
                      ++|||||+|+||.+++++|+++|.++++...+..  ...+... .+. ...++.++.+|++|.+++++++++.     ++
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~   74 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLA-DVS-DSERYVFEHADICDRAELDRIFAQH-----QP   74 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHH-hcc-cCCceEEEEecCCCHHHHHHHHHhc-----CC
Confidence            5899999999999999999999987554334322  1122211 111 1245778899999999999988752     79


Q ss_pred             cEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-----CCCCeEEEEcCCcccc------------
Q 024338          106 DILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMK-----KKKGRIINIASVVGLV------------  168 (269)
Q Consensus       106 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-----~~~~~iv~isS~~~~~------------  168 (269)
                      |+|||+|+.....    ...+..++.+++|+.++.++++++.+.|.+     ++..++|++||...+-            
T Consensus        75 d~vih~A~~~~~~----~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~  150 (352)
T PRK10084         75 DAVMHLAAESHVD----RSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSE  150 (352)
T ss_pred             CEEEECCcccCCc----chhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccc
Confidence            9999999865321    112334678999999999999999887632     1235899999964322            


Q ss_pred             ---------CCCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccc--ccChHHHHHHHhcC--CC----
Q 024338          169 ---------GNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTA--KLGEDLEKKILEKI--PL----  231 (269)
Q Consensus       169 ---------~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~--~~~~~~~~~~~~~~--~~----  231 (269)
                               +..+...|+.||.+.+.+++.++.++   |+++..+.|+.+..|...  ............+.  ++    
T Consensus       151 ~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~g  227 (352)
T PRK10084        151 ELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTY---GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKG  227 (352)
T ss_pred             cCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEEeCCC
Confidence                     11234689999999999999887765   677788888888877531  11222222222221  11    


Q ss_pred             ---CCCCCHHHHHHHHHHhccCCCCCCccccEEEecCC
Q 024338          232 ---GRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGG  266 (269)
Q Consensus       232 ---~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg  266 (269)
                         +.+.+++|++++++.++..+    ..|+++++.++
T Consensus       228 ~~~~~~v~v~D~a~a~~~~l~~~----~~~~~yni~~~  261 (352)
T PRK10084        228 DQIRDWLYVEDHARALYKVVTEG----KAGETYNIGGH  261 (352)
T ss_pred             CeEEeeEEHHHHHHHHHHHHhcC----CCCceEEeCCC
Confidence               23568999999999887432    24688887655

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.80  E-value=1.6e-17  Score=139.47  Aligned_cols=208  Identities=19%  Similarity=0.161  Sum_probs=134.2

Q ss_pred             ccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCH-HHHHHHHHHH
Q 024338           20 AAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKE-ADVESMIKTA   98 (269)
Q Consensus        20 ~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~-~~~~~~~~~~   98 (269)
                      ...+.++|++|||||+|+||+.++++|+++|++|+++ .|+.+...+...    ...++.++.+|++|. +++.+.+.  
T Consensus        11 ~~~~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~-~R~~~~~~~~~~----~~~~~~~~~~Dl~d~~~~l~~~~~--   83 (251)
T PLN00141         11 DAENVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAG-VRDVDKAKTSLP----QDPSLQIVRADVTEGSDKLVEAIG--   83 (251)
T ss_pred             ccccccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEE-ecCHHHHHHhcc----cCCceEEEEeeCCCCHHHHHHHhh--
Confidence            3455678999999999999999999999999998874 677655433221    134688899999983 33222220  


Q ss_pred             HHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcccc---CCCCChh
Q 024338           99 VDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLV---GNIGQAN  175 (269)
Q Consensus        99 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~---~~~~~~~  175 (269)
                          .++|+||+++|......  .      ...+++|+.+...+++++.    +++.++||++||...+.   +.+....
T Consensus        84 ----~~~d~vi~~~g~~~~~~--~------~~~~~~n~~~~~~ll~a~~----~~~~~~iV~iSS~~v~g~~~~~~~~~~  147 (251)
T PLN00141         84 ----DDSDAVICATGFRRSFD--P------FAPWKVDNFGTVNLVEACR----KAGVTRFILVSSILVNGAAMGQILNPA  147 (251)
T ss_pred             ----cCCCEEEECCCCCcCCC--C------CCceeeehHHHHHHHHHHH----HcCCCEEEEEccccccCCCcccccCcc
Confidence                27999999998642211  0      1124678888777777763    45668999999986432   2233445


Q ss_pred             hHHhHHHHHHHHHHHHHH--hccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCC
Q 024338          176 YSAAKAGVIGLTKTVAKE--YASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAA  253 (269)
Q Consensus       176 Y~~sK~al~~~~~~la~e--~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~  253 (269)
                      |...|.+...+...+..|  +...|++++.|+||++.++........    ...........+++|+|+.++.++..+..
T Consensus       148 ~~~~~~~~~~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~~~~~~~~----~~~~~~~~~~i~~~dvA~~~~~~~~~~~~  223 (251)
T PLN00141        148 YIFLNLFGLTLVAKLQAEKYIRKSGINYTIVRPGGLTNDPPTGNIVM----EPEDTLYEGSISRDQVAEVAVEALLCPES  223 (251)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECCCccCCCCCceEEE----CCCCccccCcccHHHHHHHHHHHhcChhh
Confidence            766665444333333333  456799999999999987642211000    00001112345899999999999876654


Q ss_pred             C
Q 024338          254 G  254 (269)
Q Consensus       254 ~  254 (269)
                      .
T Consensus       224 ~  224 (251)
T PLN00141        224 S  224 (251)
T ss_pred             c
Confidence            3

>PLN02686 cinnamoyl-CoA reductase

Probab=99.80  E-value=4.1e-17  Score=144.28  Aligned_cols=211  Identities=12%  Similarity=0.124  Sum_probs=144.9

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHc------CCcEEEEEccCCCHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS------GGQALTFGGDVSKEADVESM   94 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~------~~~~~~~~~Dls~~~~~~~~   94 (269)
                      ..+.++|++|||||+|+||.+++++|+++|++|+++ .|+.+..+.+ .++...      ...+.++.+|++|.+++.++
T Consensus        48 ~~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~-~r~~~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~  125 (367)
T PLN02686         48 GADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIA-VDTQEDKEKL-REMEMFGEMGRSNDGIWTVMANLTEPESLHEA  125 (367)
T ss_pred             ccCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEE-eCCHHHHHHH-HHHhhhccccccCCceEEEEcCCCCHHHHHHH
Confidence            456789999999999999999999999999999874 5665554443 232211      12577899999999998888


Q ss_pred             HHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcc-cc-----
Q 024338           95 IKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVG-LV-----  168 (269)
Q Consensus        95 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~-~~-----  168 (269)
                      ++       .+|.+||.|+.........    ......++|+.++..+++++...   .+..++|++||..+ ..     
T Consensus       126 i~-------~~d~V~hlA~~~~~~~~~~----~~~~~~~~nv~gt~~llea~~~~---~~v~r~V~~SS~~~~vyg~~~~  191 (367)
T PLN02686        126 FD-------GCAGVFHTSAFVDPAGLSG----YTKSMAELEAKASENVIEACVRT---ESVRKCVFTSSLLACVWRQNYP  191 (367)
T ss_pred             HH-------hccEEEecCeeeccccccc----ccchhhhhhHHHHHHHHHHHHhc---CCccEEEEeccHHHhcccccCC
Confidence            76       5799999998754322111    11345677888988887776431   24569999999631 11     


Q ss_pred             ---C--------------CCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccCh-HHHHHHHhcCC
Q 024338          169 ---G--------------NIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGE-DLEKKILEKIP  230 (269)
Q Consensus       169 ---~--------------~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~-~~~~~~~~~~~  230 (269)
                         +              .++...|+.||.+.+.+++.++.+   .|+++++++|+.+.+|....... ..........+
T Consensus       192 ~~~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~gl~~v~lRp~~vyGp~~~~~~~~~~~~~~~g~~~  268 (367)
T PLN02686        192 HDLPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARG---KGLKLATICPALVTGPGFFRRNSTATIAYLKGAQE  268 (367)
T ss_pred             CCCCcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHh---cCceEEEEcCCceECCCCCCCCChhHHHHhcCCCc
Confidence               0              012246999999999999887665   48999999999999996432111 11111111111


Q ss_pred             C-----CCCCCHHHHHHHHHHhccC
Q 024338          231 L-----GRYGQPEEVAGLVEFLALN  250 (269)
Q Consensus       231 ~-----~~~~~~~~~a~~~~~l~~~  250 (269)
                      .     ..+.+++|++++++.++..
T Consensus       269 ~~g~g~~~~v~V~Dva~A~~~al~~  293 (367)
T PLN02686        269 MLADGLLATADVERLAEAHVCVYEA  293 (367)
T ss_pred             cCCCCCcCeEEHHHHHHHHHHHHhc
Confidence            1     1356899999999988853

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.79  E-value=1.3e-18  Score=145.76  Aligned_cols=218  Identities=19%  Similarity=0.226  Sum_probs=153.6

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHc--CCcE----EEEEccCCCHHHHHHHHHHHHHhc
Q 024338           29 AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS--GGQA----LTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        29 vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~--~~~~----~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      ||||||+|.||.++++++++.+...++++++++..+-.+..++++.  +.++    .++.+|++|.+.+.+++++.    
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~----   76 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY----   76 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT------
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc----
Confidence            7999999999999999999999776666899999998888888543  2223    34578999999999888764    


Q ss_pred             CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHH
Q 024338          103 GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAG  182 (269)
Q Consensus       103 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  182 (269)
                       ++|+|+|.|+.-+....+.    ...+.+++|+.|+.++++++..    .+..++|++|+..+..|   ...||+||..
T Consensus        77 -~pdiVfHaAA~KhVpl~E~----~p~eav~tNv~GT~nv~~aa~~----~~v~~~v~ISTDKAv~P---tnvmGatKrl  144 (293)
T PF02719_consen   77 -KPDIVFHAAALKHVPLMED----NPFEAVKTNVLGTQNVAEAAIE----HGVERFVFISTDKAVNP---TNVMGATKRL  144 (293)
T ss_dssp             -T-SEEEE------HHHHCC----CHHHHHHHHCHHHHHHHHHHHH----TT-SEEEEEEECGCSS-----SHHHHHHHH
T ss_pred             -CCCEEEEChhcCCCChHHh----CHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEccccccCCC---CcHHHHHHHH
Confidence             8999999999865533222    4577899999999999998875    56779999999988764   4789999999


Q ss_pred             HHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCC--------CCCCCHHHHHHHHHHhccCCCCC
Q 024338          183 VIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPL--------GRYGQPEEVAGLVEFLALNPAAG  254 (269)
Q Consensus       183 l~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~a~~~~~l~~~~~~~  254 (269)
                      .+.++.+.+......+.++.+|.-|-|-..-.. ..+.+.+++.++-|+        +.+.+++|.++.++..+...   
T Consensus       145 aE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GS-Vip~F~~Qi~~g~PlTvT~p~mtRffmti~EAv~Lvl~a~~~~---  220 (293)
T PF02719_consen  145 AEKLVQAANQYSGNSDTKFSSVRFGNVLGSRGS-VIPLFKKQIKNGGPLTVTDPDMTRFFMTIEEAVQLVLQAAALA---  220 (293)
T ss_dssp             HHHHHHHHCCTSSSS--EEEEEEE-EETTGTTS-CHHHHHHHHHTTSSEEECETT-EEEEE-HHHHHHHHHHHHHH----
T ss_pred             HHHHHHHHhhhCCCCCcEEEEEEecceecCCCc-HHHHHHHHHHcCCcceeCCCCcEEEEecHHHHHHHHHHHHhhC---
Confidence            999999888887677899999999988654322 235566666666554        34568999999999887432   


Q ss_pred             CccccEEEecCCc
Q 024338          255 YITGQVLTIDGGM  267 (269)
Q Consensus       255 ~~~G~~i~~dgg~  267 (269)
                       ..|+++..|-|.
T Consensus       221 -~~geifvl~mg~  232 (293)
T PF02719_consen  221 -KGGEIFVLDMGE  232 (293)
T ss_dssp             --TTEEEEE---T
T ss_pred             -CCCcEEEecCCC
Confidence             358999888764

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.79  E-value=1.8e-17  Score=136.53  Aligned_cols=217  Identities=19%  Similarity=0.147  Sum_probs=161.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCc--EEEE----ecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCK--VLVN----YARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~--v~i~----~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      +++|||||.|.||..+++++.++...  |+.+    ..-+.+.+..+.     ...++.++++|+.|.+.+.+++++-  
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~-----~~~~~~fv~~DI~D~~~v~~~~~~~--   73 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVE-----DSPRYRFVQGDICDRELVDRLFKEY--   73 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhh-----cCCCceEEeccccCHHHHHHHHHhc--
Confidence            46899999999999999999988753  3442    222333332222     2458999999999999999888864  


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccc-------------
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGL-------------  167 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~-------------  167 (269)
                         .+|+++|-|+-++..    .+...-+..+++|+.|++.++.++..+..   .-|+++||...-+             
T Consensus        74 ---~~D~VvhfAAESHVD----RSI~~P~~Fi~TNv~GT~~LLEaar~~~~---~frf~HISTDEVYG~l~~~~~~FtE~  143 (340)
T COG1088          74 ---QPDAVVHFAAESHVD----RSIDGPAPFIQTNVVGTYTLLEAARKYWG---KFRFHHISTDEVYGDLGLDDDAFTET  143 (340)
T ss_pred             ---CCCeEEEechhcccc----ccccChhhhhhcchHHHHHHHHHHHHhcc---cceEEEeccccccccccCCCCCcccC
Confidence               799999999977653    35667788999999999999999987652   2589999985322             


Q ss_pred             cCCCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcc--cccChHHHHHHHhcCCC---------CCCCC
Q 024338          168 VGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMT--AKLGEDLEKKILEKIPL---------GRYGQ  236 (269)
Q Consensus       168 ~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~--~~~~~~~~~~~~~~~~~---------~~~~~  236 (269)
                      .+..+.++|++||++.+.+++++.+.+   |+.+....|.--..|..  +++.+..+-....+.|+         +.+..
T Consensus       144 tp~~PsSPYSASKAasD~lVray~~TY---glp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~iRDWl~  220 (340)
T COG1088         144 TPYNPSSPYSASKAASDLLVRAYVRTY---GLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIRDWLY  220 (340)
T ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHHc---CCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcceeeeEE
Confidence            345678899999999999999999887   88999998887777742  22334444444444444         23457


Q ss_pred             HHHHHHHHHHhccCCCCCCccccEEEecCCc
Q 024338          237 PEEVAGLVEFLALNPAAGYITGQVLTIDGGM  267 (269)
Q Consensus       237 ~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg~  267 (269)
                      ++|-+.++..++..  +  -.||++++.||.
T Consensus       221 VeDh~~ai~~Vl~k--g--~~GE~YNIgg~~  247 (340)
T COG1088         221 VEDHCRAIDLVLTK--G--KIGETYNIGGGN  247 (340)
T ss_pred             eHhHHHHHHHHHhc--C--cCCceEEeCCCc
Confidence            89999999988843  2  239999998874

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.78  E-value=6.8e-17  Score=141.28  Aligned_cols=223  Identities=17%  Similarity=0.156  Sum_probs=145.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHc-CCcEEEEEccCCCHHHHHHHHHHHHHhcCCcc
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS-GGQALTFGGDVSKEADVESMIKTAVDAWGTVD  106 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id  106 (269)
                      ++|||||+|+||.+++++|+++|++|+++ .|..+........+.+. +.+..++.+|++|.+++.++++.     .++|
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~d   75 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHDVVIL-DNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHD-----HAID   75 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEE-ecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhc-----CCCC
Confidence            58999999999999999999999999885 33222222222222222 34567789999999988888763     3799


Q ss_pred             EEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccC-----------C-CCCh
Q 024338          107 ILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVG-----------N-IGQA  174 (269)
Q Consensus       107 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~-----------~-~~~~  174 (269)
                      +|||+|+......    ..+...+.+++|+.++..+++++.    +.+.+++|++||...+-.           . .+..
T Consensus        76 ~vvh~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~  147 (338)
T PRK10675         76 TVIHFAGLKAVGE----SVQKPLEYYDNNVNGTLRLISAMR----AANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQS  147 (338)
T ss_pred             EEEECCccccccc----hhhCHHHHHHHHHHHHHHHHHHHH----HcCCCEEEEeccHHhhCCCCCCccccccCCCCCCC
Confidence            9999998754321    123345688999999888877653    345678999999754311           1 2357


Q ss_pred             hhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccc--------ccChHH---HHHHH-hcC----------C--
Q 024338          175 NYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTA--------KLGEDL---EKKIL-EKI----------P--  230 (269)
Q Consensus       175 ~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~--------~~~~~~---~~~~~-~~~----------~--  230 (269)
                      .|+.+|.+.+.+++.++++..  ++++..+.|+.+.++...        .....+   ..... ...          +  
T Consensus       148 ~Y~~sK~~~E~~~~~~~~~~~--~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (338)
T PRK10675        148 PYGKSKLMVEQILTDLQKAQP--DWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTE  225 (338)
T ss_pred             hhHHHHHHHHHHHHHHHHhcC--CCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCC
Confidence            899999999999998876542  467777776655554210        001111   11111 111          0  


Q ss_pred             ----CCCCCCHHHHHHHHHHhccCCCCCCccccEEEecCCc
Q 024338          231 ----LGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM  267 (269)
Q Consensus       231 ----~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg~  267 (269)
                          ...+..++|+|++++.++.... ....|+++++.+|.
T Consensus       226 ~g~~~~~~v~v~D~a~~~~~~~~~~~-~~~~~~~~ni~~~~  265 (338)
T PRK10675        226 DGTGVRDYIHVMDLADGHVAAMEKLA-NKPGVHIYNLGAGV  265 (338)
T ss_pred             CCcEEEeeEEHHHHHHHHHHHHHhhh-ccCCCceEEecCCC
Confidence                1235689999999988874311 11235788886653

>PLN02427 UDP-apiose/xylose synthase

Probab=99.77  E-value=7.1e-17  Score=143.80  Aligned_cols=223  Identities=16%  Similarity=0.171  Sum_probs=148.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHc-CCcEEEEecCCHHHHHHHHHHHH-HcCCcEEEEEccCCCHHHHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKA-GCKVLVNYARSSKEAEEVCKEIE-ASGGQALTFGGDVSKEADVESMIKTAV   99 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~-G~~v~i~~~r~~~~~~~~~~~l~-~~~~~~~~~~~Dls~~~~~~~~~~~~~   99 (269)
                      +..+.++||||||+|.||.+++++|+++ |++|+++ +|+.+....+..... ....++.++.+|++|.++++++++   
T Consensus        10 ~~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l-~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~---   85 (386)
T PLN02427         10 KPIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLAL-DVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIK---   85 (386)
T ss_pred             CcccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEE-ecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhh---
Confidence            3455678999999999999999999998 5888875 565544333221100 112468899999999988887775   


Q ss_pred             HhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCC---------
Q 024338          100 DAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGN---------  170 (269)
Q Consensus       100 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~---------  170 (269)
                          .+|+|||+|+........    +.-.+.+..|+.++..+++++..    .+ .++|++||...+-..         
T Consensus        86 ----~~d~ViHlAa~~~~~~~~----~~~~~~~~~n~~gt~~ll~aa~~----~~-~r~v~~SS~~vYg~~~~~~~~e~~  152 (386)
T PLN02427         86 ----MADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYCSE----NN-KRLIHFSTCEVYGKTIGSFLPKDH  152 (386)
T ss_pred             ----cCCEEEEcccccChhhhh----hChHHHHHHHHHHHHHHHHHHHh----cC-CEEEEEeeeeeeCCCcCCCCCccc
Confidence                579999999975432111    11234466799998888877642    23 689999996432110         


Q ss_pred             ------------------------CCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccc---------c
Q 024338          171 ------------------------IGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAK---------L  217 (269)
Q Consensus       171 ------------------------~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~---------~  217 (269)
                                              .....|+.||.+.+.+++.++..   .|+.+..+.|+.+..|....         .
T Consensus       153 p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~  229 (386)
T PLN02427        153 PLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEG  229 (386)
T ss_pred             ccccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhh---cCCceEEecccceeCCCCCccccccccccc
Confidence                                    01236999999988888765433   48999999999999885321         0


Q ss_pred             ChH----HHHHHHhcCCC---------CCCCCHHHHHHHHHHhccCCCCCCccccEEEecCC
Q 024338          218 GED----LEKKILEKIPL---------GRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGG  266 (269)
Q Consensus       218 ~~~----~~~~~~~~~~~---------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg  266 (269)
                      .+.    +......+.+.         +.+..++|+|++++.++..+.  ...|+++++.+|
T Consensus       230 ~~~~i~~~~~~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~~--~~~g~~yni~~~  289 (386)
T PLN02427        230 VPRVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPA--RANGHIFNVGNP  289 (386)
T ss_pred             cchHHHHHHHHHhcCCCeEEECCCCceECcEeHHHHHHHHHHHHhCcc--cccCceEEeCCC
Confidence            111    12222222221         236689999999999885432  135788888764

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.77  E-value=3.2e-17  Score=135.77  Aligned_cols=210  Identities=22%  Similarity=0.280  Sum_probs=154.9

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCccEE
Q 024338           29 AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDIL  108 (269)
Q Consensus        29 vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l  108 (269)
                      ||||||+|.||.+++++|.++|..|+.+..++.+.......      .++.++.+|+.|.++++++++..     ++|.|
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~------~~~~~~~~dl~~~~~~~~~~~~~-----~~d~v   69 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKK------LNVEFVIGDLTDKEQLEKLLEKA-----NIDVV   69 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHH------TTEEEEESETTSHHHHHHHHHHH-----TESEE
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCcccccccccccccccccc------ceEEEEEeecccccccccccccc-----CceEE
Confidence            79999999999999999999999988765555443321111      17889999999999999999876     89999


Q ss_pred             EEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCC-----------CCChhhH
Q 024338          109 INNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGN-----------IGQANYS  177 (269)
Q Consensus       109 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~-----------~~~~~Y~  177 (269)
                      ||+|+.....    ...+.....++.|+.+...+++++..    .+..++|++||...+...           .+...|+
T Consensus        70 i~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~  141 (236)
T PF01370_consen   70 IHLAAFSSNP----ESFEDPEEIIEANVQGTRNLLEAARE----AGVKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYG  141 (236)
T ss_dssp             EEEBSSSSHH----HHHHSHHHHHHHHHHHHHHHHHHHHH----HTTSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHH
T ss_pred             EEeecccccc----cccccccccccccccccccccccccc----cccccccccccccccccccccccccccccccccccc
Confidence            9999865311    12246678888899887777777654    445799999996443222           1345699


Q ss_pred             HhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCc-----ccccChHHHHHHHhcCCC---------CCCCCHHHHHHH
Q 024338          178 AAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDM-----TAKLGEDLEKKILEKIPL---------GRYGQPEEVAGL  243 (269)
Q Consensus       178 ~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~-----~~~~~~~~~~~~~~~~~~---------~~~~~~~~~a~~  243 (269)
                      .+|...+.+++.+..+.   ++++..+.|+.+..|.     .....+.+......+.+.         +.+..++|+|++
T Consensus       142 ~~K~~~e~~~~~~~~~~---~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  218 (236)
T PF01370_consen  142 ASKRAAEELLRDYAKKY---GLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEA  218 (236)
T ss_dssp             HHHHHHHHHHHHHHHHH---TSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHH
T ss_pred             ccccccccccccccccc---ccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHH
Confidence            99999999988887765   8999999999999987     111223444455444322         123479999999


Q ss_pred             HHHhccCCCCCCccccEEEe
Q 024338          244 VEFLALNPAAGYITGQVLTI  263 (269)
Q Consensus       244 ~~~l~~~~~~~~~~G~~i~~  263 (269)
                      ++.++..+.   ..|++++|
T Consensus       219 ~~~~~~~~~---~~~~~yNi  235 (236)
T PF01370_consen  219 IVAALENPK---AAGGIYNI  235 (236)
T ss_dssp             HHHHHHHSC---TTTEEEEE
T ss_pred             HHHHHhCCC---CCCCEEEe
Confidence            999997654   46788876

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.76  E-value=1.1e-16  Score=139.00  Aligned_cols=209  Identities=20%  Similarity=0.145  Sum_probs=147.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCcc
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVD  106 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id  106 (269)
                      ++++||||+|+||.++++.|+++|++|+++ .|+++....+    .  ...+.++.+|++|.++++++++       ++|
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~----~--~~~~~~~~~D~~~~~~l~~~~~-------~~d   66 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVL-VRPTSDRRNL----E--GLDVEIVEGDLRDPASLRKAVA-------GCR   66 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEE-EecCcccccc----c--cCCceEEEeeCCCHHHHHHHHh-------CCC
Confidence            369999999999999999999999998885 5654433211    1  2357789999999998888775       689


Q ss_pred             EEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCC---------------
Q 024338          107 ILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNI---------------  171 (269)
Q Consensus       107 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~---------------  171 (269)
                      +|||+|+....      ..+..+..+++|+.++..+++++..    .+.+++|++||...+.+.+               
T Consensus        67 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~  136 (328)
T TIGR03466        67 ALFHVAADYRL------WAPDPEEMYAANVEGTRNLLRAALE----AGVERVVYTSSVATLGVRGDGTPADETTPSSLDD  136 (328)
T ss_pred             EEEEeceeccc------CCCCHHHHHHHHHHHHHHHHHHHHH----hCCCeEEEEechhhcCcCCCCCCcCccCCCCccc
Confidence            99999985321      1124567899999998888887654    4457999999976543211               


Q ss_pred             CChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC--hHH-HHHHHhcCCC-----CCCCCHHHHHHH
Q 024338          172 GQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG--EDL-EKKILEKIPL-----GRYGQPEEVAGL  243 (269)
Q Consensus       172 ~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~--~~~-~~~~~~~~~~-----~~~~~~~~~a~~  243 (269)
                      ....|+.+|.+.+.+++.++.+   .|+++..+.|+.+.++......  ... ........+.     ..+..++|+|++
T Consensus       137 ~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a  213 (328)
T TIGR03466       137 MIGHYKRSKFLAEQAALEMAAE---KGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYVDTGLNLVHVDDVAEG  213 (328)
T ss_pred             ccChHHHHHHHHHHHHHHHHHh---cCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCceeeCCCcceEEHHHHHHH
Confidence            1347999999999998887654   3799999999998877532211  111 1111111111     124579999999


Q ss_pred             HHHhccCCCCCCccccEEEecCC
Q 024338          244 VEFLALNPAAGYITGQVLTIDGG  266 (269)
Q Consensus       244 ~~~l~~~~~~~~~~G~~i~~dgg  266 (269)
                      +..++..+    ..|+.+.+++.
T Consensus       214 ~~~~~~~~----~~~~~~~~~~~  232 (328)
T TIGR03466       214 HLLALERG----RIGERYILGGE  232 (328)
T ss_pred             HHHHHhCC----CCCceEEecCC
Confidence            98887442    35777877543

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.75  E-value=4.8e-16  Score=136.82  Aligned_cols=215  Identities=19%  Similarity=0.234  Sum_probs=143.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcC--CcEEEEecCCHHH---HHHHHHHHHHcC--------CcEEEEEccCCCHH-----
Q 024338           28 VAVVTGASRGIGRAVATSLGKAG--CKVLVNYARSSKE---AEEVCKEIEASG--------GQALTFGGDVSKEA-----   89 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G--~~v~i~~~r~~~~---~~~~~~~l~~~~--------~~~~~~~~Dls~~~-----   89 (269)
                      ++|||||+|+||.+++++|+++|  ++|+.+ .|+.+.   .+++.+.+....        .++.++.+|++++.     
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l-~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~   79 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICL-VRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSD   79 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEE-EccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCH
Confidence            48999999999999999999999  667775 554332   223333332211        47889999998642     


Q ss_pred             -HHHHHHHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcccc
Q 024338           90 -DVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLV  168 (269)
Q Consensus        90 -~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~  168 (269)
                       ....+.       ..+|++||||+.....       ..++..+++|+.++..+++.+..    .+..+++++||.....
T Consensus        80 ~~~~~~~-------~~~d~vih~a~~~~~~-------~~~~~~~~~nv~g~~~ll~~a~~----~~~~~~v~iSS~~v~~  141 (367)
T TIGR01746        80 AEWERLA-------ENVDTIVHNGALVNWV-------YPYSELRAANVLGTREVLRLAAS----GRAKPLHYVSTISVLA  141 (367)
T ss_pred             HHHHHHH-------hhCCEEEeCCcEeccC-------CcHHHHhhhhhHHHHHHHHHHhh----CCCceEEEEccccccC
Confidence             333222       3799999999865321       23567788999998888877653    4445699999987653


Q ss_pred             CC----------------CCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc--ChHHHHHH----H
Q 024338          169 GN----------------IGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL--GEDLEKKI----L  226 (269)
Q Consensus       169 ~~----------------~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~--~~~~~~~~----~  226 (269)
                      ..                .....|+.+|.+.+.+++.++.    .|++++.+.||.+.++.....  ........    .
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~  217 (367)
T TIGR01746       142 AIDLSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREASD----RGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCL  217 (367)
T ss_pred             CcCCCCccccccccccccccCCChHHHHHHHHHHHHHHHh----cCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHH
Confidence            31                1134799999998888776543    389999999999998622111  11111111    1


Q ss_pred             --hcCCC-----CCCCCHHHHHHHHHHhccCCCCCCccccEEEecCC
Q 024338          227 --EKIPL-----GRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGG  266 (269)
Q Consensus       227 --~~~~~-----~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg  266 (269)
                        ...|.     ..+.++++++++++.++..+. .+.+|+++++.++
T Consensus       218 ~~~~~p~~~~~~~~~~~vddva~ai~~~~~~~~-~~~~~~~~~v~~~  263 (367)
T TIGR01746       218 ALGAYPDSPELTEDLTPVDYVARAIVALSSQPA-ASAGGPVFHVVNP  263 (367)
T ss_pred             HhCCCCCCCccccCcccHHHHHHHHHHHHhCCC-cccCCceEEecCC
Confidence              11121     225689999999999985543 2245788888775

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.75  E-value=2.7e-16  Score=136.40  Aligned_cols=221  Identities=15%  Similarity=0.048  Sum_probs=148.1

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCccE
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDI  107 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~  107 (269)
                      ++|||||+|+||..++++|.++|++|+++ ++......+....+... .++..+.+|+++.++++++++.     .++|+
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   73 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVL-DNLSNGSPEALKRGERI-TRVTFVEGDLRDRELLDRLFEE-----HKIDA   73 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEE-eCCCccchhhhhhhccc-cceEEEECCCCCHHHHHHHHHh-----CCCcE
Confidence            37999999999999999999999998874 44322211112222211 2577889999999999988763     37999


Q ss_pred             EEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccC-----------CCCChhh
Q 024338          108 LINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVG-----------NIGQANY  176 (269)
Q Consensus       108 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~-----------~~~~~~Y  176 (269)
                      +|||||......    ..+...+.++.|+.++..+++++..    .+.+++|++||...+..           ..+...|
T Consensus        74 vv~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y  145 (328)
T TIGR01179        74 VIHFAGLIAVGE----SVQDPLKYYRNNVVNTLNLLEAMQQ----TGVKKFIFSSSAAVYGEPSSIPISEDSPLGPINPY  145 (328)
T ss_pred             EEECccccCcch----hhcCchhhhhhhHHHHHHHHHHHHh----cCCCEEEEecchhhcCCCCCCCccccCCCCCCCch
Confidence            999999753321    2234567789999999988887543    44579999998654321           1134679


Q ss_pred             HHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc-------Ch----HHHHHHHhc----------CCC----
Q 024338          177 SAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL-------GE----DLEKKILEK----------IPL----  231 (269)
Q Consensus       177 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-------~~----~~~~~~~~~----------~~~----  231 (269)
                      +.+|++.+.+++.++.+.  .++++..+.|+.+..+.....       ..    .+.......          .+.    
T Consensus       146 ~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  223 (328)
T TIGR01179       146 GRSKLMSERILRDLSKAD--PGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGT  223 (328)
T ss_pred             HHHHHHHHHHHHHHHHhc--cCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCc
Confidence            999999999999887652  478999999988887642111       11    111111111          011    


Q ss_pred             --CCCCCHHHHHHHHHHhccCCCCCCccccEEEecCC
Q 024338          232 --GRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGG  266 (269)
Q Consensus       232 --~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg  266 (269)
                        ..+..++|++++++.++.... ....|+++++.++
T Consensus       224 ~~~~~v~~~D~a~~~~~~~~~~~-~~~~~~~~n~~~~  259 (328)
T TIGR01179       224 CVRDYIHVMDLADAHLAALEYLL-NGGESHVYNLGYG  259 (328)
T ss_pred             eEEeeeeHHHHHHHHHHHHhhhh-cCCCcceEEcCCC
Confidence              135678999999998884321 1234678887554

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.72  E-value=1.5e-15  Score=133.34  Aligned_cols=214  Identities=13%  Similarity=0.114  Sum_probs=144.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHc-CCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCC-CHHHHHHHHHHHHHhcCC
Q 024338           27 PVAVVTGASRGIGRAVATSLGKA-GCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVS-KEADVESMIKTAVDAWGT  104 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~-G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls-~~~~~~~~~~~~~~~~~~  104 (269)
                      +++|||||+|.||.+++++|+++ |++|+.+ .|+.+....+.    . ...+.++.+|++ +.+.+.++++       +
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~-~r~~~~~~~~~----~-~~~~~~~~~Dl~~~~~~~~~~~~-------~   68 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGM-DMQTDRLGDLV----N-HPRMHFFEGDITINKEWIEYHVK-------K   68 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEE-eCcHHHHHHhc----c-CCCeEEEeCCCCCCHHHHHHHHc-------C
Confidence            46999999999999999999986 6898885 55543322211    1 235888999998 6665555443       6


Q ss_pred             ccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCC--------------
Q 024338          105 VDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGN--------------  170 (269)
Q Consensus       105 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~--------------  170 (269)
                      +|+|||+|+...+..    ..++.+..+++|+.++.++++++..    .+ .++|++||...+-..              
T Consensus        69 ~d~ViH~aa~~~~~~----~~~~p~~~~~~n~~~~~~ll~aa~~----~~-~~~v~~SS~~vyg~~~~~~~~ee~~~~~~  139 (347)
T PRK11908         69 CDVILPLVAIATPAT----YVKQPLRVFELDFEANLPIVRSAVK----YG-KHLVFPSTSEVYGMCPDEEFDPEASPLVY  139 (347)
T ss_pred             CCEEEECcccCChHH----hhcCcHHHHHHHHHHHHHHHHHHHh----cC-CeEEEEecceeeccCCCcCcCcccccccc
Confidence            899999999754321    1223457789999998888777643    33 699999997433110              


Q ss_pred             ----CCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccc----------cChHHHHHHHhcCC------
Q 024338          171 ----IGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAK----------LGEDLEKKILEKIP------  230 (269)
Q Consensus       171 ----~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~----------~~~~~~~~~~~~~~------  230 (269)
                          ++...|+.||.+.+..++.++..   .|+.+..+.|+.+..|....          ........+..+.+      
T Consensus       140 ~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  216 (347)
T PRK11908        140 GPINKPRWIYACSKQLMDRVIWAYGME---EGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDG  216 (347)
T ss_pred             CcCCCccchHHHHHHHHHHHHHHHHHH---cCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecC
Confidence                11236999999998888877654   47888899998887774321          11122222222221      


Q ss_pred             ---CCCCCCHHHHHHHHHHhccCCCCCCccccEEEecCC
Q 024338          231 ---LGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGG  266 (269)
Q Consensus       231 ---~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg  266 (269)
                         .+.+..++|++++++.++..+. ....|+++++.++
T Consensus       217 g~~~r~~i~v~D~a~a~~~~~~~~~-~~~~g~~yni~~~  254 (347)
T PRK11908        217 GSQKRAFTDIDDGIDALMKIIENKD-GVASGKIYNIGNP  254 (347)
T ss_pred             CceeeccccHHHHHHHHHHHHhCcc-ccCCCCeEEeCCC
Confidence               2246789999999999885532 1245788988764

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.71  E-value=4.5e-15  Score=131.42  Aligned_cols=227  Identities=17%  Similarity=0.043  Sum_probs=151.1

Q ss_pred             hhhhhhcccccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHH
Q 024338           11 ATIEQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEAD   90 (269)
Q Consensus        11 ~~~~~~~~~~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~   90 (269)
                      +|+-..+.+..+.=++|++|||||+|.||.++++.|.++|++|+.+ .|.....   .   ........++.+|++|.++
T Consensus         6 ~~~~~~~~~~~~~~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v-~r~~~~~---~---~~~~~~~~~~~~Dl~d~~~   78 (370)
T PLN02695          6 YTLAELEREPYWPSEKLRICITGAGGFIASHIARRLKAEGHYIIAS-DWKKNEH---M---SEDMFCHEFHLVDLRVMEN   78 (370)
T ss_pred             cchhhcCCCCCCCCCCCEEEEECCccHHHHHHHHHHHhCCCEEEEE-Eeccccc---c---ccccccceEEECCCCCHHH
Confidence            3444555555555578999999999999999999999999999885 4432211   0   0001124578899999887


Q ss_pred             HHHHHHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcccc--
Q 024338           91 VESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLV--  168 (269)
Q Consensus        91 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~--  168 (269)
                      +.+++.       ++|+|||+|+.........   ......+..|+.++.++++++..    .+.+++|++||...+-  
T Consensus        79 ~~~~~~-------~~D~Vih~Aa~~~~~~~~~---~~~~~~~~~N~~~t~nll~aa~~----~~vk~~V~~SS~~vYg~~  144 (370)
T PLN02695         79 CLKVTK-------GVDHVFNLAADMGGMGFIQ---SNHSVIMYNNTMISFNMLEAARI----NGVKRFFYASSACIYPEF  144 (370)
T ss_pred             HHHHHh-------CCCEEEEcccccCCccccc---cCchhhHHHHHHHHHHHHHHHHH----hCCCEEEEeCchhhcCCc
Confidence            776654       6899999998643221111   12234567899998888887643    4556999999964221  


Q ss_pred             ---------------CCCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccc------cChHHHHHHHh
Q 024338          169 ---------------GNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAK------LGEDLEKKILE  227 (269)
Q Consensus       169 ---------------~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~------~~~~~~~~~~~  227 (269)
                                     +..+...|+.+|.+.+.+++..+..   .|+++..+.|+.+..|....      ..+.+......
T Consensus       145 ~~~~~~~~~~E~~~~p~~p~s~Yg~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~  221 (370)
T PLN02695        145 KQLETNVSLKESDAWPAEPQDAYGLEKLATEELCKHYTKD---FGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALT  221 (370)
T ss_pred             cccCcCCCcCcccCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCEEEEEECCccCCCCCccccccccHHHHHHHHHc
Confidence                           2234558999999999888876554   38999999999999985321      11223322221


Q ss_pred             ---cCC-------CCCCCCHHHHHHHHHHhccCCCCCCccccEEEecCC
Q 024338          228 ---KIP-------LGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGG  266 (269)
Q Consensus       228 ---~~~-------~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg  266 (269)
                         .++       .+.+..++|++++++.+...+     .++.+++.+|
T Consensus       222 ~~~~i~~~g~g~~~r~~i~v~D~a~ai~~~~~~~-----~~~~~nv~~~  265 (370)
T PLN02695        222 STDEFEMWGDGKQTRSFTFIDECVEGVLRLTKSD-----FREPVNIGSD  265 (370)
T ss_pred             CCCCeEEeCCCCeEEeEEeHHHHHHHHHHHHhcc-----CCCceEecCC
Confidence               111       123568999999999987442     2467777655

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.70  E-value=1.7e-15  Score=143.39  Aligned_cols=217  Identities=15%  Similarity=0.088  Sum_probs=147.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHc-CCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHH-HHHHHHHHHHh
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKA-GCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEAD-VESMIKTAVDA  101 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~-G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~-~~~~~~~~~~~  101 (269)
                      .++++||||||+|.||.+++++|+++ |++|+.+ +|+........     ...++.++.+|++|.++ ++++++     
T Consensus       313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l-~r~~~~~~~~~-----~~~~~~~~~gDl~d~~~~l~~~l~-----  381 (660)
T PRK08125        313 KRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGL-DIGSDAISRFL-----GHPRFHFVEGDISIHSEWIEYHIK-----  381 (660)
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEE-eCCchhhhhhc-----CCCceEEEeccccCcHHHHHHHhc-----
Confidence            46789999999999999999999986 7999885 56553322211     12367889999998654 344443     


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCC-----------
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGN-----------  170 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~-----------  170 (269)
                        ++|+|||+|+.......    .+..+..+++|+.++..+++++..    .+ .++|++||...+-..           
T Consensus       382 --~~D~ViHlAa~~~~~~~----~~~~~~~~~~Nv~~t~~ll~a~~~----~~-~~~V~~SS~~vyg~~~~~~~~E~~~~  450 (660)
T PRK08125        382 --KCDVVLPLVAIATPIEY----TRNPLRVFELDFEENLKIIRYCVK----YN-KRIIFPSTSEVYGMCTDKYFDEDTSN  450 (660)
T ss_pred             --CCCEEEECccccCchhh----ccCHHHHHHhhHHHHHHHHHHHHh----cC-CeEEEEcchhhcCCCCCCCcCccccc
Confidence              68999999997543211    122346789999999988888764    23 589999996433110           


Q ss_pred             ----C---CChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc----------ChHHHHHHHhcCC---
Q 024338          171 ----I---GQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL----------GEDLEKKILEKIP---  230 (269)
Q Consensus       171 ----~---~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~----------~~~~~~~~~~~~~---  230 (269)
                          |   +...|+.||.+.+.+++.++..+   |+++..+.|+.+..|.....          ...+......+.+   
T Consensus       451 ~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~~---g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~  527 (660)
T PRK08125        451 LIVGPINKQRWIYSVSKQLLDRVIWAYGEKE---GLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKL  527 (660)
T ss_pred             cccCCCCCCccchHHHHHHHHHHHHHHHHhc---CCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEE
Confidence                1   12369999999998888776553   78999999999988753211          1122222222211   


Q ss_pred             ------CCCCCCHHHHHHHHHHhccCCCCCCccccEEEecCC
Q 024338          231 ------LGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGG  266 (269)
Q Consensus       231 ------~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg  266 (269)
                            .+.+..++|++++++.++..+. ....|+++++.+|
T Consensus       528 ~g~g~~~rd~i~v~Dva~a~~~~l~~~~-~~~~g~iyni~~~  568 (660)
T PRK08125        528 VDGGKQKRCFTDIRDGIEALFRIIENKD-NRCDGQIINIGNP  568 (660)
T ss_pred             eCCCceeeceeeHHHHHHHHHHHHhccc-cccCCeEEEcCCC
Confidence                  1246689999999999885432 1235788888765

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.68  E-value=6.4e-15  Score=140.00  Aligned_cols=222  Identities=19%  Similarity=0.165  Sum_probs=149.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHc--CCcEEEEecCCH--HHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHH
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKA--GCKVLVNYARSS--KEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTA   98 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~--G~~v~i~~~r~~--~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~   98 (269)
                      .+++|+||||||+|.||.+++++|+++  |++|+.+ .+..  +....+...  ....++.++.+|++|.+.+.+++.. 
T Consensus         3 ~~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~-d~~~~~~~~~~l~~~--~~~~~v~~~~~Dl~d~~~~~~~~~~-   78 (668)
T PLN02260          3 TYEPKNILITGAAGFIASHVANRLIRNYPDYKIVVL-DKLDYCSNLKNLNPS--KSSPNFKFVKGDIASADLVNYLLIT-   78 (668)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEE-eCCCccchhhhhhhc--ccCCCeEEEECCCCChHHHHHHHhh-
Confidence            356799999999999999999999998  5777764 4321  222221111  1134688899999998877765532 


Q ss_pred             HHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccC---------
Q 024338           99 VDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVG---------  169 (269)
Q Consensus        99 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~---------  169 (269)
                          .++|+|||+|+......    ..+...+.+++|+.++..+++++...   ...+++|++||...+-.         
T Consensus        79 ----~~~D~ViHlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~vkr~I~~SS~~vyg~~~~~~~~~~  147 (668)
T PLN02260         79 ----EGIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDADVGN  147 (668)
T ss_pred             ----cCCCEEEECCCccCchh----hhhCHHHHHHHHHHHHHHHHHHHHhc---CCCcEEEEEcchHHhCCCccccccCc
Confidence                37999999999754321    12234567899999988888776431   22569999999753211         


Q ss_pred             -----CCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccc--cChHHHHHHHhcCCC---------CC
Q 024338          170 -----NIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAK--LGEDLEKKILEKIPL---------GR  233 (269)
Q Consensus       170 -----~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~--~~~~~~~~~~~~~~~---------~~  233 (269)
                           ..+...|+.+|.+.+.+++.++.++   ++.+..+.|+.+..|....  ..+.+......+.++         +.
T Consensus       148 ~E~~~~~p~~~Y~~sK~~aE~~v~~~~~~~---~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~r~  224 (668)
T PLN02260        148 HEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRS  224 (668)
T ss_pred             cccCCCCCCCCcHHHHHHHHHHHHHHHHHc---CCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecCCCceEe
Confidence                 1134579999999999998776653   7899999999999875321  122233332222211         23


Q ss_pred             CCCHHHHHHHHHHhccCCCCCCccccEEEecCC
Q 024338          234 YGQPEEVAGLVEFLALNPAAGYITGQVLTIDGG  266 (269)
Q Consensus       234 ~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg  266 (269)
                      +..++|+|+++..++...    ..|+++++.++
T Consensus       225 ~ihV~Dva~a~~~~l~~~----~~~~vyni~~~  253 (668)
T PLN02260        225 YLYCEDVAEAFEVVLHKG----EVGHVYNIGTK  253 (668)
T ss_pred             eEEHHHHHHHHHHHHhcC----CCCCEEEECCC
Confidence            467999999999887432    24678888654

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.68  E-value=2.9e-15  Score=133.34  Aligned_cols=210  Identities=14%  Similarity=0.169  Sum_probs=142.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHH--HHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEE--VCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~--~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      ..+++++|||||+|+||.+++++|+++|++|+++ .|+......  ...++......+.++.+|++|.+++.++++..  
T Consensus        57 ~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l-~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~--  133 (390)
T PLN02657         57 EPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAV-AREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSE--  133 (390)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE-EechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHh--
Confidence            3467899999999999999999999999999885 666543321  11122222346788999999999999888753  


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhH
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                       .+++|+||||++.....         ....+++|+.+..++++++.    +.+.+++|++||.....   +...|..+|
T Consensus       134 -~~~~D~Vi~~aa~~~~~---------~~~~~~vn~~~~~~ll~aa~----~~gv~r~V~iSS~~v~~---p~~~~~~sK  196 (390)
T PLN02657        134 -GDPVDVVVSCLASRTGG---------VKDSWKIDYQATKNSLDAGR----EVGAKHFVLLSAICVQK---PLLEFQRAK  196 (390)
T ss_pred             -CCCCcEEEECCccCCCC---------CccchhhHHHHHHHHHHHHH----HcCCCEEEEEeeccccC---cchHHHHHH
Confidence             12699999999843211         11335678888777766653    45667999999986543   345688889


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCC---C--C-----CCCCHHHHHHHHHHhccC
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIP---L--G-----RYGQPEEVAGLVEFLALN  250 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~---~--~-----~~~~~~~~a~~~~~l~~~  250 (269)
                      ...+...+.     ...+++...+.|+.+..++..     ..+....+.+   .  +     .+.+.+|+|..+..++.+
T Consensus       197 ~~~E~~l~~-----~~~gl~~tIlRp~~~~~~~~~-----~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~  266 (390)
T PLN02657        197 LKFEAELQA-----LDSDFTYSIVRPTAFFKSLGG-----QVEIVKDGGPYVMFGDGKLCACKPISEADLASFIADCVLD  266 (390)
T ss_pred             HHHHHHHHh-----ccCCCCEEEEccHHHhcccHH-----HHHhhccCCceEEecCCcccccCceeHHHHHHHHHHHHhC
Confidence            877766543     245899999999877644311     1122212111   1  1     135789999999998854


Q ss_pred             CCCCCccccEEEecC
Q 024338          251 PAAGYITGQVLTIDG  265 (269)
Q Consensus       251 ~~~~~~~G~~i~~dg  265 (269)
                      +.   ..|+++++.|
T Consensus       267 ~~---~~~~~~~Igg  278 (390)
T PLN02657        267 ES---KINKVLPIGG  278 (390)
T ss_pred             cc---ccCCEEEcCC
Confidence            32   2478888865

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.68  E-value=5.4e-15  Score=127.69  Aligned_cols=209  Identities=12%  Similarity=0.103  Sum_probs=137.2

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH--hcCCcc
Q 024338           29 AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD--AWGTVD  106 (269)
Q Consensus        29 vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~--~~~~id  106 (269)
                      +|||||+|.||.+++++|+++|++++++.++... ..... .         ...+|+.|..+.+.+++++.+  .++++|
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~-~~~~~-~---------~~~~~~~d~~~~~~~~~~~~~~~~~~~~d   70 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKD-GTKFV-N---------LVDLDIADYMDKEDFLAQIMAGDDFGDIE   70 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCc-chHHH-h---------hhhhhhhhhhhHHHHHHHHhcccccCCcc
Confidence            7999999999999999999999976665444332 11110 1         234577776666666655543  345799


Q ss_pred             EEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccC-----------CCCChh
Q 024338          107 ILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVG-----------NIGQAN  175 (269)
Q Consensus       107 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~-----------~~~~~~  175 (269)
                      +|||+|+......   ..   -+..++.|+.++..+++++..    .+ .++|++||...+-.           ..+...
T Consensus        71 ~Vih~A~~~~~~~---~~---~~~~~~~n~~~t~~ll~~~~~----~~-~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~  139 (308)
T PRK11150         71 AIFHEGACSSTTE---WD---GKYMMDNNYQYSKELLHYCLE----RE-IPFLYASSAATYGGRTDDFIEEREYEKPLNV  139 (308)
T ss_pred             EEEECceecCCcC---CC---hHHHHHHHHHHHHHHHHHHHH----cC-CcEEEEcchHHhCcCCCCCCccCCCCCCCCH
Confidence            9999998643321   11   245789999998888887743    33 37999999754321           123457


Q ss_pred             hHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc--Ch----HHHHHHHhcCC----------CCCCCCHHH
Q 024338          176 YSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL--GE----DLEKKILEKIP----------LGRYGQPEE  239 (269)
Q Consensus       176 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~--~~----~~~~~~~~~~~----------~~~~~~~~~  239 (269)
                      |+.+|.+.+.+++.++.+   .++.+..+.|+.+..|.....  ..    .+.....++.+          .+.+..++|
T Consensus       140 Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D  216 (308)
T PRK11150        140 YGYSKFLFDEYVRQILPE---ANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGD  216 (308)
T ss_pred             HHHHHHHHHHHHHHHHHH---cCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHH
Confidence            999999999888877654   378999999999888753221  11    11122222211          123568999


Q ss_pred             HHHHHHHhccCCCCCCccccEEEecCCc
Q 024338          240 VAGLVEFLALNPAAGYITGQVLTIDGGM  267 (269)
Q Consensus       240 ~a~~~~~l~~~~~~~~~~G~~i~~dgg~  267 (269)
                      ++++++.++..+     .+.++++.+|.
T Consensus       217 ~a~a~~~~~~~~-----~~~~yni~~~~  239 (308)
T PRK11150        217 VAAVNLWFWENG-----VSGIFNCGTGR  239 (308)
T ss_pred             HHHHHHHHHhcC-----CCCeEEcCCCC
Confidence            999998887532     24578876553

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.67  E-value=1.3e-14  Score=123.97  Aligned_cols=191  Identities=16%  Similarity=0.179  Sum_probs=133.1

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCccEE
Q 024338           29 AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDIL  108 (269)
Q Consensus        29 vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l  108 (269)
                      +|||||+|.||.+++++|.++|++|+++ .|+                     .+|+.+.++++++++..     ++|++
T Consensus         2 ilv~G~tG~iG~~l~~~l~~~g~~v~~~-~r~---------------------~~d~~~~~~~~~~~~~~-----~~d~v   54 (287)
T TIGR01214         2 ILITGANGQLGRELVQQLSPEGRVVVAL-TSS---------------------QLDLTDPEALERLLRAI-----RPDAV   54 (287)
T ss_pred             EEEEcCCCHHHHHHHHHHHhcCCEEEEe-CCc---------------------ccCCCCHHHHHHHHHhC-----CCCEE
Confidence            7999999999999999999999998885 553                     47999999998887752     68999


Q ss_pred             EEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccC-----------CCCChhhH
Q 024338          109 INNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVG-----------NIGQANYS  177 (269)
Q Consensus       109 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~-----------~~~~~~Y~  177 (269)
                      ||+|+......    .....+..+++|+.++..+++++..    .+ .++|++||...+.+           ..+...|+
T Consensus        55 i~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~  125 (287)
T TIGR01214        55 VNTAAYTDVDG----AESDPEKAFAVNALAPQNLARAAAR----HG-ARLVHISTDYVFDGEGKRPYREDDATNPLNVYG  125 (287)
T ss_pred             EECCccccccc----cccCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEeeeeeecCCCCCCCCCCCCCCCcchhh
Confidence            99998653211    1223567889999999888887643    23 48999999653321           11346799


Q ss_pred             HhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccc-ccChHHHHHHHhcCC-------CCCCCCHHHHHHHHHHhcc
Q 024338          178 AAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTA-KLGEDLEKKILEKIP-------LGRYGQPEEVAGLVEFLAL  249 (269)
Q Consensus       178 ~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~-~~~~~~~~~~~~~~~-------~~~~~~~~~~a~~~~~l~~  249 (269)
                      .+|.+.+.+++.+       +.++..+.|+.+..+... .....+........+       ...+...+|+|+++..++.
T Consensus       126 ~~K~~~E~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~  198 (287)
T TIGR01214       126 QSKLAGEQAIRAA-------GPNALIVRTSWLYGGGGGRNFVRTMLRLAGRGEELRVVDDQIGSPTYAKDLARVIAALLQ  198 (287)
T ss_pred             HHHHHHHHHHHHh-------CCCeEEEEeeecccCCCCCCHHHHHHHHhhcCCCceEecCCCcCCcCHHHHHHHHHHHHh
Confidence            9999888877654       457899999999887531 111222222222111       1234568999999999985


Q ss_pred             CCCCCCccccEEEecC
Q 024338          250 NPAAGYITGQVLTIDG  265 (269)
Q Consensus       250 ~~~~~~~~G~~i~~dg  265 (269)
                      .+..   .++++++-+
T Consensus       199 ~~~~---~~~~~ni~~  211 (287)
T TIGR01214       199 RLAR---ARGVYHLAN  211 (287)
T ss_pred             hccC---CCCeEEEEC
Confidence            4311   245565543

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.67  E-value=8.3e-15  Score=126.45  Aligned_cols=208  Identities=20%  Similarity=0.195  Sum_probs=144.9

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc-cE
Q 024338           29 AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTV-DI  107 (269)
Q Consensus        29 vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i-d~  107 (269)
                      +|||||+|.||.+++++|.++|++|..+ .|.........       ..+.++.+|+++.+...++++       .. |.
T Consensus         3 ILVtG~tGfiG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~-------~~~d~   67 (314)
T COG0451           3 ILVTGGAGFIGSHLVERLLAAGHDVRGL-DRLRDGLDPLL-------SGVEFVVLDLTDRDLVDELAK-------GVPDA   67 (314)
T ss_pred             EEEEcCcccHHHHHHHHHHhCCCeEEEE-eCCCccccccc-------cccceeeecccchHHHHHHHh-------cCCCE
Confidence            9999999999999999999999999995 55443322111       356778999999855555554       33 99


Q ss_pred             EEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCC-----------CCCh--
Q 024338          108 LINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGN-----------IGQA--  174 (269)
Q Consensus       108 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~-----------~~~~--  174 (269)
                      +||+|+........  .. ...+.+++|+.++.++++++..    .+..++|+.||.....+.           +..+  
T Consensus        68 vih~aa~~~~~~~~--~~-~~~~~~~~nv~gt~~ll~aa~~----~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~  140 (314)
T COG0451          68 VIHLAAQSSVPDSN--AS-DPAEFLDVNVDGTLNLLEAARA----AGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLN  140 (314)
T ss_pred             EEEccccCchhhhh--hh-CHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEeCCCceECCCCCCCCcccccCCCCCCC
Confidence            99999976542110  11 3567999999998888888765    567799996665433321           1111  


Q ss_pred             hhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC-----hHHHHHHHhcCC-CC---------CCCCHHH
Q 024338          175 NYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG-----EDLEKKILEKIP-LG---------RYGQPEE  239 (269)
Q Consensus       175 ~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~-----~~~~~~~~~~~~-~~---------~~~~~~~  239 (269)
                      .|+.+|.+.+.++.....   ..|+.+.++.|+.+..|......     ..+........+ ..         .+...+|
T Consensus       141 ~Yg~sK~~~E~~~~~~~~---~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  217 (314)
T COG0451         141 PYGVSKLAAEQLLRAYAR---LYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDD  217 (314)
T ss_pred             HHHHHHHHHHHHHHHHHH---HhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHH
Confidence            499999999999888877   45899999999999887654321     122222333333 11         2456999


Q ss_pred             HHHHHHHhccCCCCCCccccEEEecCC
Q 024338          240 VAGLVEFLALNPAAGYITGQVLTIDGG  266 (269)
Q Consensus       240 ~a~~~~~l~~~~~~~~~~G~~i~~dgg  266 (269)
                      ++++++.++..+..    + .+++.++
T Consensus       218 ~a~~~~~~~~~~~~----~-~~ni~~~  239 (314)
T COG0451         218 VADALLLALENPDG----G-VFNIGSG  239 (314)
T ss_pred             HHHHHHHHHhCCCC----c-EEEeCCC
Confidence            99999999965443    2 7777655

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.66  E-value=1.3e-14  Score=125.08  Aligned_cols=198  Identities=18%  Similarity=0.159  Sum_probs=135.6

Q ss_pred             EEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCccEEE
Q 024338           30 VVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILI  109 (269)
Q Consensus        30 lItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li  109 (269)
                      |||||+|.||.++++.|.++|+++++...+                     ..+|++|.++++++++..     ++|+||
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~---------------------~~~Dl~~~~~l~~~~~~~-----~~d~Vi   54 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH---------------------KELDLTRQADVEAFFAKE-----KPTYVI   54 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc---------------------ccCCCCCHHHHHHHHhcc-----CCCEEE
Confidence            699999999999999999999988764221                     247999999888877752     689999


Q ss_pred             EccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccC---------------C-CCC
Q 024338          110 NNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVG---------------N-IGQ  173 (269)
Q Consensus       110 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~---------------~-~~~  173 (269)
                      |+|+......   ...+..+..++.|+.++..+++++..    .+.+++|++||..-+-+               . |..
T Consensus        55 h~A~~~~~~~---~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~  127 (306)
T PLN02725         55 LAAAKVGGIH---ANMTYPADFIRENLQIQTNVIDAAYR----HGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTN  127 (306)
T ss_pred             Eeeeeecccc---hhhhCcHHHHHHHhHHHHHHHHHHHH----cCCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCc
Confidence            9998643111   01123356788999998888877753    44579999999643221               1 112


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccc------cChHHHHHH----Hhc----------CCCCC
Q 024338          174 ANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAK------LGEDLEKKI----LEK----------IPLGR  233 (269)
Q Consensus       174 ~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~------~~~~~~~~~----~~~----------~~~~~  233 (269)
                      ..|+.||.+.+.+++.+..++   ++++..+.|+.+..|....      ..+......    ..+          ...+.
T Consensus       128 ~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~  204 (306)
T PLN02725        128 EWYAIAKIAGIKMCQAYRIQY---GWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLRE  204 (306)
T ss_pred             chHHHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeec
Confidence            349999999988887776554   7899999999999885321      112222211    111          11235


Q ss_pred             CCCHHHHHHHHHHhccCCCCCCccccEEEecCCc
Q 024338          234 YGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM  267 (269)
Q Consensus       234 ~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg~  267 (269)
                      +..++|++++++.++....    .++.+++.+|.
T Consensus       205 ~i~v~Dv~~~~~~~~~~~~----~~~~~ni~~~~  234 (306)
T PLN02725        205 FLHVDDLADAVVFLMRRYS----GAEHVNVGSGD  234 (306)
T ss_pred             cccHHHHHHHHHHHHhccc----cCcceEeCCCC
Confidence            6789999999999985432    23556776653

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.65  E-value=2.3e-14  Score=129.34  Aligned_cols=212  Identities=16%  Similarity=0.067  Sum_probs=140.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCH-HHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSS-KEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~-~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      ..++++||||||+|.||.+++++|.++|++|+++ .+.. ...+.....+  ...++.++..|+.+..     +      
T Consensus       116 ~~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~l-d~~~~~~~~~~~~~~--~~~~~~~i~~D~~~~~-----l------  181 (442)
T PLN02206        116 KRKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVV-DNFFTGRKENVMHHF--SNPNFELIRHDVVEPI-----L------  181 (442)
T ss_pred             ccCCCEEEEECcccHHHHHHHHHHHHCcCEEEEE-eCCCccchhhhhhhc--cCCceEEEECCccChh-----h------
Confidence            3467899999999999999999999999999885 3321 1111121111  1245778888987642     1      


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccC------------
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVG------------  169 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~------------  169 (269)
                       ..+|+|||+|+.......    .++.++.+++|+.++.++++++..    .+ .++|++||...+..            
T Consensus       182 -~~~D~ViHlAa~~~~~~~----~~~p~~~~~~Nv~gt~nLleaa~~----~g-~r~V~~SS~~VYg~~~~~p~~E~~~~  251 (442)
T PLN02206        182 -LEVDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQVETYWG  251 (442)
T ss_pred             -cCCCEEEEeeeecchhhh----hcCHHHHHHHHHHHHHHHHHHHHH----hC-CEEEEECChHHhCCCCCCCCCccccc
Confidence             258999999986543211    123467899999999999888754    23 48999999864421            


Q ss_pred             ----CCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccc----cChHHHHHHHhcCCC---------C
Q 024338          170 ----NIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAK----LGEDLEKKILEKIPL---------G  232 (269)
Q Consensus       170 ----~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~----~~~~~~~~~~~~~~~---------~  232 (269)
                          ......|+.+|.+.+.+++.+...   .++++..+.|+.+..|....    ....+......+.+.         +
T Consensus       252 ~~~P~~~~s~Y~~SK~~aE~~~~~y~~~---~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~r  328 (442)
T PLN02206        252 NVNPIGVRSCYDEGKRTAETLTMDYHRG---ANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTR  328 (442)
T ss_pred             cCCCCCccchHHHHHHHHHHHHHHHHHH---hCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEE
Confidence                112457999999988888776544   37899999998888775321    112233333222111         2


Q ss_pred             CCCCHHHHHHHHHHhccCCCCCCccccEEEecCC
Q 024338          233 RYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGG  266 (269)
Q Consensus       233 ~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg  266 (269)
                      .+..++|+|++++.++..+     .+..+++.+|
T Consensus       329 dfi~V~Dva~ai~~a~e~~-----~~g~yNIgs~  357 (442)
T PLN02206        329 SFQFVSDLVEGLMRLMEGE-----HVGPFNLGNP  357 (442)
T ss_pred             eEEeHHHHHHHHHHHHhcC-----CCceEEEcCC
Confidence            3568999999999887432     1347877655

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.65  E-value=2.1e-14  Score=124.09  Aligned_cols=210  Identities=14%  Similarity=0.106  Sum_probs=136.6

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCC-cEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCccE
Q 024338           29 AVVTGASRGIGRAVATSLGKAGC-KVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDI  107 (269)
Q Consensus        29 vlItGas~giG~~~a~~l~~~G~-~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~  107 (269)
                      +|||||+|.||.++++.|.++|+ .|+++ +|..... .+. ++.     ...+..|+++.+.++.+.+.   .+.++|+
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~-~~~~~~~-~~~-~~~-----~~~~~~d~~~~~~~~~~~~~---~~~~~D~   69 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVV-DNLRDGH-KFL-NLA-----DLVIADYIDKEDFLDRLEKG---AFGKIEA   69 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEE-ecCCCch-hhh-hhh-----heeeeccCcchhHHHHHHhh---ccCCCCE
Confidence            68999999999999999999998 56664 4433211 111 111     12456788877666655442   3458999


Q ss_pred             EEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccC-----------CCCChhh
Q 024338          108 LINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVG-----------NIGQANY  176 (269)
Q Consensus       108 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~-----------~~~~~~Y  176 (269)
                      |||+|+....      ..++.+..+++|+.++..+++++..    .+ .++|++||...+-.           ..+...|
T Consensus        70 vvh~A~~~~~------~~~~~~~~~~~n~~~~~~ll~~~~~----~~-~~~v~~SS~~vy~~~~~~~~e~~~~~~p~~~Y  138 (314)
T TIGR02197        70 IFHQGACSDT------TETDGEYMMENNYQYSKRLLDWCAE----KG-IPFIYASSAATYGDGEAGFREGRELERPLNVY  138 (314)
T ss_pred             EEECccccCc------cccchHHHHHHHHHHHHHHHHHHHH----hC-CcEEEEccHHhcCCCCCCcccccCcCCCCCHH
Confidence            9999996432      2234577889999998888887754    23 48999999754321           1245679


Q ss_pred             HHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc------ChHHHHHHHhcCC---------------CCCCC
Q 024338          177 SAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL------GEDLEKKILEKIP---------------LGRYG  235 (269)
Q Consensus       177 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~------~~~~~~~~~~~~~---------------~~~~~  235 (269)
                      +.+|.+.+.+++...... ..++++..+.|+.+..|.....      ...+........+               .+.+.
T Consensus       139 ~~sK~~~e~~~~~~~~~~-~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i  217 (314)
T TIGR02197       139 GYSKFLFDQYVRRRVLPE-ALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFV  217 (314)
T ss_pred             HHHHHHHHHHHHHHhHhh-ccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeE
Confidence            999999888887533221 2257888899988888753211      1122222222111               12466


Q ss_pred             CHHHHHHHHHHhccCCCCCCccccEEEecCC
Q 024338          236 QPEEVAGLVEFLALNPAAGYITGQVLTIDGG  266 (269)
Q Consensus       236 ~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg  266 (269)
                      ..+|++++++.++..     ..+.++++.++
T Consensus       218 ~v~D~a~~i~~~~~~-----~~~~~yni~~~  243 (314)
T TIGR02197       218 YVKDVVDVNLWLLEN-----GVSGIFNLGTG  243 (314)
T ss_pred             EHHHHHHHHHHHHhc-----ccCceEEcCCC
Confidence            899999999999854     13567877665

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.64  E-value=1.2e-14  Score=120.43  Aligned_cols=160  Identities=18%  Similarity=0.133  Sum_probs=119.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCcc
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVD  106 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id  106 (269)
                      +++|||||.|-||.+++++|++.|++|+++..-+....+.+...      ...++.+|+.|.+.+.+++++.     +||
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~------~~~f~~gDi~D~~~L~~vf~~~-----~id   69 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL------QFKFYEGDLLDRALLTAVFEEN-----KID   69 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc------cCceEEeccccHHHHHHHHHhc-----CCC
Confidence            46999999999999999999999999999644433333322211      1568999999999998888874     899


Q ss_pred             EEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCC------------CCh
Q 024338          107 ILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNI------------GQA  174 (269)
Q Consensus       107 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~------------~~~  174 (269)
                      .|||.||....+.    +.+.-.+.++.|+.++..|++++..    .+...+||-||. +..+.|            +..
T Consensus        70 aViHFAa~~~VgE----Sv~~Pl~Yy~NNv~gTl~Ll~am~~----~gv~~~vFSStA-avYG~p~~~PI~E~~~~~p~N  140 (329)
T COG1087          70 AVVHFAASISVGE----SVQNPLKYYDNNVVGTLNLIEAMLQ----TGVKKFIFSSTA-AVYGEPTTSPISETSPLAPIN  140 (329)
T ss_pred             EEEECccccccch----hhhCHHHHHhhchHhHHHHHHHHHH----hCCCEEEEecch-hhcCCCCCcccCCCCCCCCCC
Confidence            9999999765442    4566788999999998888776654    555677765554 443332            456


Q ss_pred             hhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCc
Q 024338          175 NYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFI  209 (269)
Q Consensus       175 ~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v  209 (269)
                      +|+.||.+.+.+.+.++..+   +.++..+..--+
T Consensus       141 PYG~sKlm~E~iL~d~~~a~---~~~~v~LRYFN~  172 (329)
T COG1087         141 PYGRSKLMSEEILRDAAKAN---PFKVVILRYFNV  172 (329)
T ss_pred             cchhHHHHHHHHHHHHHHhC---CCcEEEEEeccc
Confidence            89999999999999888765   466666655433

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.62  E-value=5e-14  Score=122.27  Aligned_cols=200  Identities=15%  Similarity=0.121  Sum_probs=131.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCccE
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDI  107 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~  107 (269)
                      +++||||+|.||.+++++|.++|++|.++ .|+.+....+    ..  ..+.++.+|++|.+++.++++       ++|+
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l-~R~~~~~~~l----~~--~~v~~v~~Dl~d~~~l~~al~-------g~d~   67 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCL-VRNLRKASFL----KE--WGAELVYGDLSLPETLPPSFK-------GVTA   67 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEE-EcChHHhhhH----hh--cCCEEEECCCCCHHHHHHHHC-------CCCE
Confidence            69999999999999999999999999885 6665443221    11  257789999999998887776       7899


Q ss_pred             EEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHHHHHH
Q 024338          108 LINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLT  187 (269)
Q Consensus       108 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~  187 (269)
                      |||+++....         +.....++|+.+..++++++.    +.+..++|++||..+..  .+...|..+|...+.+.
T Consensus        68 Vi~~~~~~~~---------~~~~~~~~~~~~~~~l~~aa~----~~gvkr~I~~Ss~~~~~--~~~~~~~~~K~~~e~~l  132 (317)
T CHL00194         68 IIDASTSRPS---------DLYNAKQIDWDGKLALIEAAK----AAKIKRFIFFSILNAEQ--YPYIPLMKLKSDIEQKL  132 (317)
T ss_pred             EEECCCCCCC---------CccchhhhhHHHHHHHHHHHH----HcCCCEEEEeccccccc--cCCChHHHHHHHHHHHH
Confidence            9998763211         123456678888777776664    35567999999864431  12356888888766554


Q ss_pred             HHHHHHhccCCeEEEEEecCCccCCcccccChHHHH-H---HHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEEEe
Q 024338          188 KTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEK-K---ILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTI  263 (269)
Q Consensus       188 ~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~  263 (269)
                      +       ..|+....+.|+.+..++.......... .   .........+.+++|+|++++.++..+.   ..|+++++
T Consensus       133 ~-------~~~l~~tilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~---~~~~~~ni  202 (317)
T CHL00194        133 K-------KSGIPYTIFRLAGFFQGLISQYAIPILEKQPIWITNESTPISYIDTQDAAKFCLKSLSLPE---TKNKTFPL  202 (317)
T ss_pred             H-------HcCCCeEEEeecHHhhhhhhhhhhhhccCCceEecCCCCccCccCHHHHHHHHHHHhcCcc---ccCcEEEe
Confidence            3       3478999999985543321111000000 0   0000001134568999999998885443   24788988


Q ss_pred             cCC
Q 024338          264 DGG  266 (269)
Q Consensus       264 dgg  266 (269)
                      -|+
T Consensus       203 ~g~  205 (317)
T CHL00194        203 VGP  205 (317)
T ss_pred             cCC
Confidence            765

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.62  E-value=6.4e-14  Score=120.59  Aligned_cols=158  Identities=14%  Similarity=0.147  Sum_probs=110.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCccE
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDI  107 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~  107 (269)
                      ++|||||+|.||.+++++|.++| +|+.+ .|...                 .+..|++|.+++++++++.     ++|+
T Consensus         2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~-~~~~~-----------------~~~~Dl~d~~~~~~~~~~~-----~~D~   57 (299)
T PRK09987          2 NILLFGKTGQVGWELQRALAPLG-NLIAL-DVHST-----------------DYCGDFSNPEGVAETVRKI-----RPDV   57 (299)
T ss_pred             eEEEECCCCHHHHHHHHHhhccC-CEEEe-ccccc-----------------cccCCCCCHHHHHHHHHhc-----CCCE
Confidence            59999999999999999999999 77664 44321                 2467999999998888753     6899


Q ss_pred             EEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcccc-----------CCCCChhh
Q 024338          108 LINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLV-----------GNIGQANY  176 (269)
Q Consensus       108 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~-----------~~~~~~~Y  176 (269)
                      |||+|+......    ..++-+..+.+|+.++..+++++..    . +.++|++||..-+-           +..+...|
T Consensus        58 Vih~Aa~~~~~~----~~~~~~~~~~~N~~~~~~l~~aa~~----~-g~~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~Y  128 (299)
T PRK09987         58 IVNAAAHTAVDK----AESEPEFAQLLNATSVEAIAKAANE----V-GAWVVHYSTDYVFPGTGDIPWQETDATAPLNVY  128 (299)
T ss_pred             EEECCccCCcch----hhcCHHHHHHHHHHHHHHHHHHHHH----c-CCeEEEEccceEECCCCCCCcCCCCCCCCCCHH
Confidence            999999754321    1223456778999998888887754    2 24899999964321           11244579


Q ss_pred             HHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHH
Q 024338          177 SAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKI  225 (269)
Q Consensus       177 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~  225 (269)
                      +.+|.+.+.+++...    .   ....+.|+.+..|........+....
T Consensus       129 g~sK~~~E~~~~~~~----~---~~~ilR~~~vyGp~~~~~~~~~~~~~  170 (299)
T PRK09987        129 GETKLAGEKALQEHC----A---KHLIFRTSWVYAGKGNNFAKTMLRLA  170 (299)
T ss_pred             HHHHHHHHHHHHHhC----C---CEEEEecceecCCCCCCHHHHHHHHH
Confidence            999998888776442    2   34778888888764333333344433

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.60  E-value=1.4e-13  Score=124.04  Aligned_cols=210  Identities=13%  Similarity=0.053  Sum_probs=139.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCH-HHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSS-KEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~-~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      +.+++|||||+|.||.+++++|+++|++|+++ +|.. ....... .+. ...++.++..|+.+..     +       .
T Consensus       119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~l-dr~~~~~~~~~~-~~~-~~~~~~~~~~Di~~~~-----~-------~  183 (436)
T PLN02166        119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVI-DNFFTGRKENLV-HLF-GNPRFELIRHDVVEPI-----L-------L  183 (436)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEE-eCCCCccHhHhh-hhc-cCCceEEEECcccccc-----c-------c
Confidence            34689999999999999999999999999885 4432 1111111 111 1235778888887542     1       2


Q ss_pred             CccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcccc---------------
Q 024338          104 TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLV---------------  168 (269)
Q Consensus       104 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~---------------  168 (269)
                      ++|+|||+|+.......    ..+-.+.++.|+.++..+++++..    .+ .++|++||...+-               
T Consensus       184 ~~D~ViHlAa~~~~~~~----~~~p~~~~~~Nv~gT~nLleaa~~----~g-~r~V~~SS~~VYg~~~~~p~~E~~~~~~  254 (436)
T PLN02166        184 EVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLEHPQKETYWGNV  254 (436)
T ss_pred             CCCEEEECceeccchhh----ccCHHHHHHHHHHHHHHHHHHHHH----hC-CEEEEECcHHHhCCCCCCCCCccccccC
Confidence            68999999986543211    113467899999999998887754    22 4899999975331               


Q ss_pred             -CCCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccc----cChHHHHHHHhcCCC---------CCC
Q 024338          169 -GNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAK----LGEDLEKKILEKIPL---------GRY  234 (269)
Q Consensus       169 -~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~----~~~~~~~~~~~~~~~---------~~~  234 (269)
                       +..+...|+.+|.+.+.+++.....   .++.+..+.|+.+..|....    ....+......+.+.         +.+
T Consensus       255 ~p~~p~s~Yg~SK~~aE~~~~~y~~~---~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdf  331 (436)
T PLN02166        255 NPIGERSCYDEGKRTAETLAMDYHRG---AGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSF  331 (436)
T ss_pred             CCCCCCCchHHHHHHHHHHHHHHHHH---hCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEee
Confidence             1112456999999999888877554   37899999998888875321    112333333322221         235


Q ss_pred             CCHHHHHHHHHHhccCCCCCCccccEEEecCC
Q 024338          235 GQPEEVAGLVEFLALNPAAGYITGQVLTIDGG  266 (269)
Q Consensus       235 ~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg  266 (269)
                      ..++|+++++..++..+     .+.++++.+|
T Consensus       332 i~V~Dva~ai~~~~~~~-----~~giyNIgs~  358 (436)
T PLN02166        332 QYVSDLVDGLVALMEGE-----HVGPFNLGNP  358 (436)
T ss_pred             EEHHHHHHHHHHHHhcC-----CCceEEeCCC
Confidence            68999999999888432     1347887654

>PLN02996 fatty acyl-CoA reductase

Probab=99.59  E-value=2.5e-13  Score=124.17  Aligned_cols=220  Identities=17%  Similarity=0.144  Sum_probs=141.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC---cEEEEecCCHH---HHHHHHHHH---------HHc---------CCcEE
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGC---KVLVNYARSSK---EAEEVCKEI---------EAS---------GGQAL   79 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~---~v~i~~~r~~~---~~~~~~~~l---------~~~---------~~~~~   79 (269)
                      ++||++|||||+|.||..+++.|++.+.   ++.++ .|...   ..+++..++         ++.         ..++.
T Consensus         9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~L-vR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~   87 (491)
T PLN02996          9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLL-LRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVT   87 (491)
T ss_pred             hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEE-EeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEE
Confidence            6899999999999999999999998653   34454 34331   122221111         110         15788


Q ss_pred             EEEccCCC-------HHHHHHHHHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Q 024338           80 TFGGDVSK-------EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMK  152 (269)
Q Consensus        80 ~~~~Dls~-------~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~  152 (269)
                      ++.+|+++       .+.++++++       .+|+|||+|+.....       +..+..+++|+.++..+++++...   
T Consensus        88 ~i~GDl~~~~LGLs~~~~~~~l~~-------~vD~ViH~AA~v~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~---  150 (491)
T PLN02996         88 PVPGDISYDDLGVKDSNLREEMWK-------EIDIVVNLAATTNFD-------ERYDVALGINTLGALNVLNFAKKC---  150 (491)
T ss_pred             EEecccCCcCCCCChHHHHHHHHh-------CCCEEEECccccCCc-------CCHHHHHHHHHHHHHHHHHHHHhc---
Confidence            99999983       333444443       689999999975421       246778999999988888877541   


Q ss_pred             CCCCeEEEEcCCccccCC---------C----------------------------------------------------
Q 024338          153 KKKGRIINIASVVGLVGN---------I----------------------------------------------------  171 (269)
Q Consensus       153 ~~~~~iv~isS~~~~~~~---------~----------------------------------------------------  171 (269)
                      .+..++|++||....-..         +                                                    
T Consensus       151 ~~~k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (491)
T PLN02996        151 VKVKMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLH  230 (491)
T ss_pred             CCCCeEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhC
Confidence            234589999997643110         0                                                    


Q ss_pred             -CChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccCh---------HHHHHHHhcCC---------CC
Q 024338          172 -GQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGE---------DLEKKILEKIP---------LG  232 (269)
Q Consensus       172 -~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~---------~~~~~~~~~~~---------~~  232 (269)
                       ....|+.||++.+.+++..    .. ++.+..+.|+.|..+...+...         ........+..         ..
T Consensus       231 ~~pn~Y~~TK~~aE~lv~~~----~~-~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~  305 (491)
T PLN02996        231 GWPNTYVFTKAMGEMLLGNF----KE-NLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVL  305 (491)
T ss_pred             CCCCchHhhHHHHHHHHHHh----cC-CCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeec
Confidence             1134999999888887543    22 7999999999998875443221         11111111111         23


Q ss_pred             CCCCHHHHHHHHHHhccCCCCCCccccEEEecCC
Q 024338          233 RYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGG  266 (269)
Q Consensus       233 ~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg  266 (269)
                      .+.++++++++++.++.......-.++++++.+|
T Consensus       306 D~v~Vddvv~a~l~a~~~~~~~~~~~~vYNi~s~  339 (491)
T PLN02996        306 DVIPADMVVNAMIVAMAAHAGGQGSEIIYHVGSS  339 (491)
T ss_pred             ceecccHHHHHHHHHHHHhhccCCCCcEEEecCC
Confidence            4568999999998887432111124678888766

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.57  E-value=3.6e-13  Score=127.93  Aligned_cols=213  Identities=17%  Similarity=0.153  Sum_probs=136.9

Q ss_pred             EEEEeCCCCchHHHHHHHHH--HcCCcEEEEecCCHHHHHHHHHHHHHcC-CcEEEEEccCCCHHHH--HHHHHHHHHhc
Q 024338           28 VAVVTGASRGIGRAVATSLG--KAGCKVLVNYARSSKEAEEVCKEIEASG-GQALTFGGDVSKEADV--ESMIKTAVDAW  102 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~--~~G~~v~i~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dls~~~~~--~~~~~~~~~~~  102 (269)
                      ++|||||+|.||.+++++|+  ++|++|.++ .|+... ..+.......+ .++.++.+|++|.+..  ...++++    
T Consensus         2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l-~R~~~~-~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l----   75 (657)
T PRK07201          2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVL-VRRQSL-SRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL----   75 (657)
T ss_pred             eEEEeCCccHHHHHHHHHHHhcCCCCEEEEE-ECcchH-HHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh----
Confidence            69999999999999999999  589998885 454322 22222222222 5788999999985310  1112222    


Q ss_pred             CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccC-------------
Q 024338          103 GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVG-------------  169 (269)
Q Consensus       103 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~-------------  169 (269)
                      .++|+|||+|+.....       ...+...++|+.++..+++++.    +.+..++|++||....-.             
T Consensus        76 ~~~D~Vih~Aa~~~~~-------~~~~~~~~~nv~gt~~ll~~a~----~~~~~~~v~~SS~~v~g~~~~~~~e~~~~~~  144 (657)
T PRK07201         76 GDIDHVVHLAAIYDLT-------ADEEAQRAANVDGTRNVVELAE----RLQAATFHHVSSIAVAGDYEGVFREDDFDEG  144 (657)
T ss_pred             cCCCEEEECceeecCC-------CCHHHHHHHHhHHHHHHHHHHH----hcCCCeEEEEeccccccCccCccccccchhh
Confidence            3799999999964322       1235577899999777776654    345679999999765321             


Q ss_pred             CCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc----C-hH----HHHHHHhc---CCC------
Q 024338          170 NIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL----G-ED----LEKKILEK---IPL------  231 (269)
Q Consensus       170 ~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~----~-~~----~~~~~~~~---~~~------  231 (269)
                      .+....|+.+|...+.+.+.      ..|+++..+.|+.+..+.....    . ..    ........   .+.      
T Consensus       145 ~~~~~~Y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (657)
T PRK07201        145 QGLPTPYHRTKFEAEKLVRE------ECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGG  218 (657)
T ss_pred             cCCCCchHHHHHHHHHHHHH------cCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCC
Confidence            11235699999988887652      2479999999999987632111    0 11    11111110   010      


Q ss_pred             -CCCCCHHHHHHHHHHhccCCCCCCccccEEEecCC
Q 024338          232 -GRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGG  266 (269)
Q Consensus       232 -~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg  266 (269)
                       ..+.+++|+++++..++..+   ...|+++++-++
T Consensus       219 ~~~~v~vddva~ai~~~~~~~---~~~g~~~ni~~~  251 (657)
T PRK07201        219 RTNIVPVDYVADALDHLMHKD---GRDGQTFHLTDP  251 (657)
T ss_pred             eeeeeeHHHHHHHHHHHhcCc---CCCCCEEEeCCC
Confidence             12446899999999998532   246888988654

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=99.55  E-value=5.8e-13  Score=112.28  Aligned_cols=184  Identities=17%  Similarity=0.198  Sum_probs=150.7

Q ss_pred             CCCEEEEeCC-CCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           25 EAPVAVVTGA-SRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        25 ~~k~vlItGa-s~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      +.++|||.|. +..|++.+|..|-++|+-|++ +..+.++.+.+.++-   ..+++.+..|..+..++...+.+..+.+.
T Consensus         2 R~evVvI~Gs~~~PltR~la~DLeRRGFIV~v-~~~~~ed~~~ve~e~---~~dI~~L~ld~~~~~~~~~~l~~f~~~L~   77 (299)
T PF08643_consen    2 RKEVVVIAGSPHDPLTRSLALDLERRGFIVYV-TVSSAEDEKYVESED---RPDIRPLWLDDSDPSSIHASLSRFASLLS   77 (299)
T ss_pred             ceeEEEEECCCCCccHHHHHHHHhhCCeEEEE-EeCCHHHHHHHHhcc---CCCCCCcccCCCCCcchHHHHHHHHHHhc
Confidence            4578999996 799999999999999999999 466665554444332   45688888899888888888777776554


Q ss_pred             --------------CccEEEEccCCC-CCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh---CCCCeEEEEcCCc
Q 024338          104 --------------TVDILINNAGIT-RDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMK---KKKGRIINIASVV  165 (269)
Q Consensus       104 --------------~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~---~~~~~iv~isS~~  165 (269)
                                    .+..||...... ..++++.++.+.|...++.|+..++..++.++|+++.   ++..-|++.-|+.
T Consensus        78 ~p~~p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~Psi~  157 (299)
T PF08643_consen   78 RPHVPFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNPSIS  157 (299)
T ss_pred             CCCCCCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeCchh
Confidence                          345666666644 4588999999999999999999999999999999987   3444455566888


Q ss_pred             cccCCCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCC
Q 024338          166 GLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASD  212 (269)
Q Consensus       166 ~~~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~  212 (269)
                      +....|..+.-.....++.+|.++|++|+.+.||.|..+..|.++-.
T Consensus       158 ssl~~PfhspE~~~~~al~~~~~~LrrEl~~~~I~V~~i~LG~l~i~  204 (299)
T PF08643_consen  158 SSLNPPFHSPESIVSSALSSFFTSLRRELRPHNIDVTQIKLGNLDIG  204 (299)
T ss_pred             hccCCCccCHHHHHHHHHHHHHHHHHHHhhhcCCceEEEEeeeeccc
Confidence            88999999999999999999999999999999999999999987754

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.54  E-value=1.4e-13  Score=109.77  Aligned_cols=173  Identities=21%  Similarity=0.223  Sum_probs=123.3

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCccEE
Q 024338           29 AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDIL  108 (269)
Q Consensus        29 vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l  108 (269)
                      |+|+||+|.+|+.++++|.++|++|.++ .|++++.++        ..++.++.+|+.|.+++.+++.       +.|.+
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~-~R~~~~~~~--------~~~~~~~~~d~~d~~~~~~al~-------~~d~v   64 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTAL-VRSPSKAED--------SPGVEIIQGDLFDPDSVKAALK-------GADAV   64 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEE-ESSGGGHHH--------CTTEEEEESCTTCHHHHHHHHT-------TSSEE
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEE-ecCchhccc--------ccccccceeeehhhhhhhhhhh-------hcchh
Confidence            6899999999999999999999999995 677765554        5689999999999988888776       79999


Q ss_pred             EEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCC---------hhhHHh
Q 024338          109 INNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQ---------ANYSAA  179 (269)
Q Consensus       109 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~---------~~Y~~s  179 (269)
                      |+++|....         +            ...++.++..+++.+..++|++||.......+..         ..|...
T Consensus        65 i~~~~~~~~---------~------------~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (183)
T PF13460_consen   65 IHAAGPPPK---------D------------VDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARD  123 (183)
T ss_dssp             EECCHSTTT---------H------------HHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHH
T ss_pred             hhhhhhhcc---------c------------ccccccccccccccccccceeeeccccCCCCCcccccccccchhhhHHH
Confidence            999975332         1            3345566666666777899999998876654442         245666


Q ss_pred             HHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhcc
Q 024338          180 KAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLAL  249 (269)
Q Consensus       180 K~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~  249 (269)
                      |...+.+.       ...+++...++|+++..+.....  .....  .........+.+|+|++++.++.
T Consensus       124 ~~~~e~~~-------~~~~~~~~ivrp~~~~~~~~~~~--~~~~~--~~~~~~~~i~~~DvA~~~~~~l~  182 (183)
T PF13460_consen  124 KREAEEAL-------RESGLNWTIVRPGWIYGNPSRSY--RLIKE--GGPQGVNFISREDVAKAIVEALE  182 (183)
T ss_dssp             HHHHHHHH-------HHSTSEEEEEEESEEEBTTSSSE--EEESS--TSTTSHCEEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHH-------HhcCCCEEEEECcEeEeCCCcce--eEEec--cCCCCcCcCCHHHHHHHHHHHhC
Confidence            65444332       23489999999999887753210  00000  11111234578999999998873

...

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.54  E-value=4.6e-13  Score=115.75  Aligned_cols=222  Identities=16%  Similarity=0.145  Sum_probs=148.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcC--CcEEEEecCCHHHHHHHHHHHH-HcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAG--CKVLVNYARSSKEAEEVCKEIE-ASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G--~~v~i~~~r~~~~~~~~~~~l~-~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      ++.++|||||+|.+|++++++|.+++  .++.+. +..+.. ..+..+.. ....++..+.+|+.|..++.++++     
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~-D~~~~~-~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~-----   75 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVV-DKTPTQ-SNLPAELTGFRSGRVTVILGDLLDANSISNAFQ-----   75 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEe-ccCccc-cccchhhhcccCCceeEEecchhhhhhhhhhcc-----
Confidence            57899999999999999999999999  666664 433321 11111111 135678899999999998888887     


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcccc------------C
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLV------------G  169 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~------------~  169 (269)
                        +. .++|+|+...+..    -..+-+..+++|+.|+.+++.++..    .+..++|++||..-..            +
T Consensus        76 --~~-~Vvh~aa~~~~~~----~~~~~~~~~~vNV~gT~nvi~~c~~----~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p  144 (361)
T KOG1430|consen   76 --GA-VVVHCAASPVPDF----VENDRDLAMRVNVNGTLNVIEACKE----LGVKRLIYTSSAYVVFGGEPIINGDESLP  144 (361)
T ss_pred             --Cc-eEEEeccccCccc----cccchhhheeecchhHHHHHHHHHH----hCCCEEEEecCceEEeCCeecccCCCCCC
Confidence              66 7777776543321    2225678999999997777777754    6778999999976543            2


Q ss_pred             CCC--ChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCC---------CCCCHH
Q 024338          170 NIG--QANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLG---------RYGQPE  238 (269)
Q Consensus       170 ~~~--~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~  238 (269)
                      .|.  ...|+.||+-.+.+......   ..+....++.|..|..|..+...+...+.+..+....         .+...+
T Consensus       145 ~p~~~~d~Y~~sKa~aE~~Vl~an~---~~~l~T~aLR~~~IYGpgd~~~~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~  221 (361)
T KOG1430|consen  145 YPLKHIDPYGESKALAEKLVLEANG---SDDLYTCALRPPGIYGPGDKRLLPKIVEALKNGGFLFKIGDGENLNDFTYGE  221 (361)
T ss_pred             CccccccccchHHHHHHHHHHHhcC---CCCeeEEEEccccccCCCCccccHHHHHHHHccCceEEeeccccccceEEec
Confidence            332  24899999977777664443   4568999999999999987776666555444332221         122334


Q ss_pred             HHHHH--HHHhccCCCCCCccccEEEecCCc
Q 024338          239 EVAGL--VEFLALNPAAGYITGQVLTIDGGM  267 (269)
Q Consensus       239 ~~a~~--~~~l~~~~~~~~~~G~~i~~dgg~  267 (269)
                      .++.+  ....+........+||.+.+..|.
T Consensus       222 Nva~ahilA~~aL~~~~~~~~Gq~yfI~d~~  252 (361)
T KOG1430|consen  222 NVAWAHILAARALLDKSPSVNGQFYFITDDT  252 (361)
T ss_pred             hhHHHHHHHHHHHHhcCCccCceEEEEeCCC
Confidence            33332  222222224456899999887663

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.53  E-value=2.7e-13  Score=113.57  Aligned_cols=156  Identities=15%  Similarity=0.172  Sum_probs=118.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHH---HHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSK---EAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~---~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      +++||||||.|.||.+.+.+|.++|+.|+++.--+..   .+.+..+.. ..+.++.++..|+.|.+.+++++++.    
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~-~~~~~v~f~~~Dl~D~~~L~kvF~~~----   76 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLL-GEGKSVFFVEGDLNDAEALEKLFSEV----   76 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhc-CCCCceEEEEeccCCHHHHHHHHhhc----
Confidence            5889999999999999999999999999986444433   333332222 22578999999999999999999876    


Q ss_pred             CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcccc-----------CC-
Q 024338          103 GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLV-----------GN-  170 (269)
Q Consensus       103 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~-----------~~-  170 (269)
                       ++|.|+|-|+....+.    +.+.....++.|+.+++.++..+..    .+-..+|+.||..-+-           +. 
T Consensus        77 -~fd~V~Hfa~~~~vge----S~~~p~~Y~~nNi~gtlnlLe~~~~----~~~~~~V~sssatvYG~p~~ip~te~~~t~  147 (343)
T KOG1371|consen   77 -KFDAVMHFAALAAVGE----SMENPLSYYHNNIAGTLNLLEVMKA----HNVKALVFSSSATVYGLPTKVPITEEDPTD  147 (343)
T ss_pred             -CCceEEeehhhhccch----hhhCchhheehhhhhHHHHHHHHHH----cCCceEEEecceeeecCcceeeccCcCCCC
Confidence             7999999999765543    3334477899999998888776654    4566888888865431           11 


Q ss_pred             CCChhhHHhHHHHHHHHHHHHHHhc
Q 024338          171 IGQANYSAAKAGVIGLTKTVAKEYA  195 (269)
Q Consensus       171 ~~~~~Y~~sK~al~~~~~~la~e~~  195 (269)
                      .+...|+.+|.+++..+......+.
T Consensus       148 ~p~~pyg~tK~~iE~i~~d~~~~~~  172 (343)
T KOG1371|consen  148 QPTNPYGKTKKAIEEIIHDYNKAYG  172 (343)
T ss_pred             CCCCcchhhhHHHHHHHHhhhcccc
Confidence            1567899999999999988877654

>PRK05865 hypothetical protein; Provisional

Probab=99.52  E-value=1.1e-12  Score=125.29  Aligned_cols=177  Identities=19%  Similarity=0.232  Sum_probs=125.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCccE
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDI  107 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~  107 (269)
                      +++||||+|+||.+++++|+++|++|+++ .|+....      +   ...+.++.+|++|.+++.++++       ++|+
T Consensus         2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l-~R~~~~~------~---~~~v~~v~gDL~D~~~l~~al~-------~vD~   64 (854)
T PRK05865          2 RIAVTGASGVLGRGLTARLLSQGHEVVGI-ARHRPDS------W---PSSADFIAADIRDATAVESAMT-------GADV   64 (854)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEE-ECCchhh------c---ccCceEEEeeCCCHHHHHHHHh-------CCCE
Confidence            59999999999999999999999999885 5553211      1   1256789999999999888776       6899


Q ss_pred             EEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHHHHHH
Q 024338          108 LINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLT  187 (269)
Q Consensus       108 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~  187 (269)
                      |||+|+....             .+++|+.++.++++++    .+.+.+++|++||..              |.+.+.++
T Consensus        65 VVHlAa~~~~-------------~~~vNv~GT~nLLeAa----~~~gvkr~V~iSS~~--------------K~aaE~ll  113 (854)
T PRK05865         65 VAHCAWVRGR-------------NDHINIDGTANVLKAM----AETGTGRIVFTSSGH--------------QPRVEQML  113 (854)
T ss_pred             EEECCCcccc-------------hHHHHHHHHHHHHHHH----HHcCCCeEEEECCcH--------------HHHHHHHH
Confidence            9999975321             4678999977666554    445667999999863              77666655


Q ss_pred             HHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhc--CCCC------CCCCHHHHHHHHHHhccCCCCCCcccc
Q 024338          188 KTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEK--IPLG------RYGQPEEVAGLVEFLALNPAAGYITGQ  259 (269)
Q Consensus       188 ~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~--~~~~------~~~~~~~~a~~~~~l~~~~~~~~~~G~  259 (269)
                      +       ..++.+..+.|+.+..|...    .+.......  .+.+      .+.+++|+|+++..++..+.   ..+.
T Consensus       114 ~-------~~gl~~vILRp~~VYGP~~~----~~i~~ll~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~---~~gg  179 (854)
T PRK05865        114 A-------DCGLEWVAVRCALIFGRNVD----NWVQRLFALPVLPAGYADRVVQVVHSDDAQRLLVRALLDTV---IDSG  179 (854)
T ss_pred             H-------HcCCCEEEEEeceEeCCChH----HHHHHHhcCceeccCCCCceEeeeeHHHHHHHHHHHHhCCC---cCCC
Confidence            3       24799999999999887421    122211111  1111      35679999999998874332   2356


Q ss_pred             EEEecCC
Q 024338          260 VLTIDGG  266 (269)
Q Consensus       260 ~i~~dgg  266 (269)
                      ++++.+|
T Consensus       180 vyNIgsg  186 (854)
T PRK05865        180 PVNLAAP  186 (854)
T ss_pred             eEEEECC
Confidence            7777655

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.50  E-value=2.4e-13  Score=116.21  Aligned_cols=195  Identities=17%  Similarity=0.211  Sum_probs=126.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCccE
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDI  107 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~  107 (269)
                      ++||||++|-||.++.+.|.++|+.++.+ .|+                     .+|++|.+++.+++++.     ++|+
T Consensus         2 riLI~GasG~lG~~l~~~l~~~~~~v~~~-~r~---------------------~~dl~d~~~~~~~~~~~-----~pd~   54 (286)
T PF04321_consen    2 RILITGASGFLGSALARALKERGYEVIAT-SRS---------------------DLDLTDPEAVAKLLEAF-----KPDV   54 (286)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTTSEEEEEE-STT---------------------CS-TTSHHHHHHHHHHH-------SE
T ss_pred             EEEEECCCCHHHHHHHHHHhhCCCEEEEe-Cch---------------------hcCCCCHHHHHHHHHHh-----CCCe
Confidence            58999999999999999999999998875 554                     77999999999998876     7999


Q ss_pred             EEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCC-----------CCChhh
Q 024338          108 LINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGN-----------IGQANY  176 (269)
Q Consensus       108 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~-----------~~~~~Y  176 (269)
                      |||+|+......    -.++-+..+.+|+.++..+.+.+..     .+.++|++||..-+.+.           .+...|
T Consensus        55 Vin~aa~~~~~~----ce~~p~~a~~iN~~~~~~la~~~~~-----~~~~li~~STd~VFdG~~~~~y~E~d~~~P~~~Y  125 (286)
T PF04321_consen   55 VINCAAYTNVDA----CEKNPEEAYAINVDATKNLAEACKE-----RGARLIHISTDYVFDGDKGGPYTEDDPPNPLNVY  125 (286)
T ss_dssp             EEE------HHH----HHHSHHHHHHHHTHHHHHHHHHHHH-----CT-EEEEEEEGGGS-SSTSSSB-TTS----SSHH
T ss_pred             EeccceeecHHh----hhhChhhhHHHhhHHHHHHHHHHHH-----cCCcEEEeeccEEEcCCcccccccCCCCCCCCHH
Confidence            999999754311    2234678899999999999888853     45699999997544332           245679


Q ss_pred             HHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCC-------CCCCCHHHHHHHHHHhcc
Q 024338          177 SAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPL-------GRYGQPEEVAGLVEFLAL  249 (269)
Q Consensus       177 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~a~~~~~l~~  249 (269)
                      |-+|...+...+.    ..+   ....+.++++..+....+...+.+.+.++.++       +.....+|+|+.+..|+.
T Consensus       126 G~~K~~~E~~v~~----~~~---~~~IlR~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA~~i~~l~~  198 (286)
T PF04321_consen  126 GRSKLEGEQAVRA----ACP---NALILRTSWVYGPSGRNFLRWLLRRLRQGEPIKLFDDQYRSPTYVDDLARVILELIE  198 (286)
T ss_dssp             HHHHHHHHHHHHH----H-S---SEEEEEE-SEESSSSSSHHHHHHHHHHCTSEEEEESSCEE--EEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH----hcC---CEEEEecceecccCCCchhhhHHHHHhcCCeeEeeCCceeCCEEHHHHHHHHHHHHH
Confidence            9999987777665    222   67788888887773333334444444333222       234568999999999996


Q ss_pred             CCCCCCccccEEEecC
Q 024338          250 NPAAGYITGQVLTIDG  265 (269)
Q Consensus       250 ~~~~~~~~G~~i~~dg  265 (269)
                      ....+.-...++.+.|
T Consensus       199 ~~~~~~~~~Giyh~~~  214 (286)
T PF04321_consen  199 KNLSGASPWGIYHLSG  214 (286)
T ss_dssp             HHHH-GGG-EEEE---
T ss_pred             hcccccccceeEEEec
Confidence            5332112234555443

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.47  E-value=3.3e-12  Score=106.83  Aligned_cols=178  Identities=19%  Similarity=0.208  Sum_probs=131.7

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCccEE
Q 024338           29 AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDIL  108 (269)
Q Consensus        29 vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l  108 (269)
                      +||||++|-+|.++++.|. .+.+|+.+ .+..                     +|++|.+.+.+++.+.     ++|+|
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~-~~~~---------------------~Ditd~~~v~~~i~~~-----~PDvV   54 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFEVIAT-DRAE---------------------LDITDPDAVLEVIRET-----RPDVV   54 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCceEEec-cCcc---------------------ccccChHHHHHHHHhh-----CCCEE
Confidence            8999999999999999999 66888775 3322                     7999999999999987     89999


Q ss_pred             EEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCC-----------CCChhhH
Q 024338          109 INNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGN-----------IGQANYS  177 (269)
Q Consensus       109 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~-----------~~~~~Y~  177 (269)
                      ||+|++.....    -+.+-+..+.+|..++.++++++..     -+..+|++|+..-+.+.           .+...||
T Consensus        55 In~AAyt~vD~----aE~~~e~A~~vNa~~~~~lA~aa~~-----~ga~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG  125 (281)
T COG1091          55 INAAAYTAVDK----AESEPELAFAVNATGAENLARAAAE-----VGARLVHISTDYVFDGEKGGPYKETDTPNPLNVYG  125 (281)
T ss_pred             EECcccccccc----ccCCHHHHHHhHHHHHHHHHHHHHH-----hCCeEEEeecceEecCCCCCCCCCCCCCCChhhhh
Confidence            99999865432    2345688999999999999998853     45689999987654332           3556899


Q ss_pred             HhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCC-------CCCCCHHHHHHHHHHhccC
Q 024338          178 AAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPL-------GRYGQPEEVAGLVEFLALN  250 (269)
Q Consensus       178 ~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~a~~~~~l~~~  250 (269)
                      .||.+-+..++...    +   +...+.-.++.....+++...+.+...++.++       +...+.+++|+++..|+..
T Consensus       126 ~sKl~GE~~v~~~~----~---~~~I~Rtswv~g~~g~nFv~tml~la~~~~~l~vv~Dq~gsPt~~~dlA~~i~~ll~~  198 (281)
T COG1091         126 RSKLAGEEAVRAAG----P---RHLILRTSWVYGEYGNNFVKTMLRLAKEGKELKVVDDQYGSPTYTEDLADAILELLEK  198 (281)
T ss_pred             HHHHHHHHHHHHhC----C---CEEEEEeeeeecCCCCCHHHHHHHHhhcCCceEEECCeeeCCccHHHHHHHHHHHHhc
Confidence            99998877766543    2   44455555666555445544444444444333       3456789999999998844

>PLN02778 3,5-epimerase/4-reductase

Probab=99.44  E-value=4.2e-11  Score=103.06  Aligned_cols=191  Identities=17%  Similarity=0.143  Sum_probs=116.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTV  105 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i  105 (269)
                      .+++|||||+|.||.+++++|.++|++|+.. .                        .|++|.+.+...++..     ++
T Consensus         9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~-~------------------------~~~~~~~~v~~~l~~~-----~~   58 (298)
T PLN02778          9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYG-S------------------------GRLENRASLEADIDAV-----KP   58 (298)
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCCEEEEe-c------------------------CccCCHHHHHHHHHhc-----CC
Confidence            4779999999999999999999999998642 1                        2344555555544432     68


Q ss_pred             cEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcc--cc---------------
Q 024338          106 DILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVG--LV---------------  168 (269)
Q Consensus       106 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~--~~---------------  168 (269)
                      |+|||+||....... +...+.-.+.+++|+.++.++++++..    .+. +.+++||...  ..               
T Consensus        59 D~ViH~Aa~~~~~~~-~~~~~~p~~~~~~Nv~gt~~ll~aa~~----~gv-~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~  132 (298)
T PLN02778         59 THVFNAAGVTGRPNV-DWCESHKVETIRANVVGTLTLADVCRE----RGL-VLTNYATGCIFEYDDAHPLGSGIGFKEED  132 (298)
T ss_pred             CEEEECCcccCCCCc-hhhhhCHHHHHHHHHHHHHHHHHHHHH----hCC-CEEEEecceEeCCCCCCCcccCCCCCcCC
Confidence            999999997643211 112234577899999999999888854    222 3455554321  10               


Q ss_pred             -CCCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCC---C-CCCCCHHHHHHH
Q 024338          169 -GNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIP---L-GRYGQPEEVAGL  243 (269)
Q Consensus       169 -~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~a~~  243 (269)
                       +.+....|+.||.+.+.+++..+..   .++|+     ++...+-. .....+...+....+   . +.+...+|++++
T Consensus       133 ~p~~~~s~Yg~sK~~~E~~~~~y~~~---~~lr~-----~~~~~~~~-~~~~~fi~~~~~~~~~~~~~~s~~yv~D~v~a  203 (298)
T PLN02778        133 TPNFTGSFYSKTKAMVEELLKNYENV---CTLRV-----RMPISSDL-SNPRNFITKITRYEKVVNIPNSMTILDELLPI  203 (298)
T ss_pred             CCCCCCCchHHHHHHHHHHHHHhhcc---EEeee-----cccCCccc-ccHHHHHHHHHcCCCeeEcCCCCEEHHHHHHH
Confidence             1112357999999998888765421   23444     22211100 011223333333221   1 336689999999


Q ss_pred             HHHhccCCCCCCccccEEEecCC
Q 024338          244 VEFLALNPAAGYITGQVLTIDGG  266 (269)
Q Consensus       244 ~~~l~~~~~~~~~~G~~i~~dgg  266 (269)
                      ++.++...    .+ ..+++.++
T Consensus       204 l~~~l~~~----~~-g~yNigs~  221 (298)
T PLN02778        204 SIEMAKRN----LT-GIYNFTNP  221 (298)
T ss_pred             HHHHHhCC----CC-CeEEeCCC
Confidence            99988432    23 47887554

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.43  E-value=2.8e-12  Score=107.54  Aligned_cols=160  Identities=21%  Similarity=0.251  Sum_probs=95.9

Q ss_pred             EeCCCCchHHHHHHHHHHcCC--cEEEEecCCH---HHHHHHHHHHH----------HcCCcEEEEEccCCCHH------
Q 024338           31 VTGASRGIGRAVATSLGKAGC--KVLVNYARSS---KEAEEVCKEIE----------ASGGQALTFGGDVSKEA------   89 (269)
Q Consensus        31 ItGas~giG~~~a~~l~~~G~--~v~i~~~r~~---~~~~~~~~~l~----------~~~~~~~~~~~Dls~~~------   89 (269)
                      ||||||.||..+.++|++++.  +|+.+ .|..   ...+++.+.+.          ....++.++.+|++++.      
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cL-vR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~   79 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCL-VRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDE   79 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEE-E-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEE-EeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChH
Confidence            799999999999999999986  67776 4443   22334433321          12579999999999743      


Q ss_pred             HHHHHHHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccc--
Q 024338           90 DVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGL--  167 (269)
Q Consensus        90 ~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~--  167 (269)
                      +.+.+.+       .+|+|||||+.....       ..+++..++|+.|+..+++.+.    ..+..+++++||....  
T Consensus        80 ~~~~L~~-------~v~~IiH~Aa~v~~~-------~~~~~~~~~NV~gt~~ll~la~----~~~~~~~~~iSTa~v~~~  141 (249)
T PF07993_consen   80 DYQELAE-------EVDVIIHCAASVNFN-------APYSELRAVNVDGTRNLLRLAA----QGKRKRFHYISTAYVAGS  141 (249)
T ss_dssp             HHHHHHH-------H--EEEE--SS-SBS--------S--EEHHHHHHHHHHHHHHHT----SSS---EEEEEEGGGTTS
T ss_pred             Hhhcccc-------ccceeeecchhhhhc-------ccchhhhhhHHHHHHHHHHHHH----hccCcceEEeccccccCC
Confidence            3333333       689999999865432       1445578899999777777664    2344499999993211  


Q ss_pred             cC------------------CCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCC
Q 024338          168 VG------------------NIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASD  212 (269)
Q Consensus       168 ~~------------------~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~  212 (269)
                      ..                  ......|..||+..|.+.+..+.+   .|+.+..+.||.+-..
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~---~g~p~~I~Rp~~i~g~  201 (249)
T PF07993_consen  142 RPGTIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQR---HGLPVTIYRPGIIVGD  201 (249)
T ss_dssp             -TTT--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHH---H---EEEEEE-EEE-S
T ss_pred             CCCcccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhc---CCceEEEEecCccccc
Confidence            11                  012347999999999998877654   3789999999988773

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.37  E-value=1.2e-10  Score=92.29  Aligned_cols=173  Identities=17%  Similarity=0.177  Sum_probs=119.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCccE
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDI  107 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~  107 (269)
                      +++||||+ |+|.++++.|+++|++|++. .|+++..+.+...+.. ..++.++.+|++|.+++.++++++.+.++++|.
T Consensus         2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~-~R~~~~~~~l~~~l~~-~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~   78 (177)
T PRK08309          2 HALVIGGT-GMLKRVSLWLCEKGFHVSVI-ARREVKLENVKRESTT-PESITPLPLDYHDDDALKLAIKSTIEKNGPFDL   78 (177)
T ss_pred             EEEEECcC-HHHHHHHHHHHHCcCEEEEE-ECCHHHHHHHHHHhhc-CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeE
Confidence            68999998 67778999999999999885 6777777666655543 457888999999999999999999999999999


Q ss_pred             EEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHHHHHH
Q 024338          108 LINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLT  187 (269)
Q Consensus       108 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~  187 (269)
                      +|+.+-...                      +-.+..++...=.+.+.-+++++-+..+..+                  
T Consensus        79 lv~~vh~~~----------------------~~~~~~~~~~~gv~~~~~~~~h~~gs~~~~~------------------  118 (177)
T PRK08309         79 AVAWIHSSA----------------------KDALSVVCRELDGSSETYRLFHVLGSAASDP------------------  118 (177)
T ss_pred             EEEeccccc----------------------hhhHHHHHHHHccCCCCceEEEEeCCcCCch------------------
Confidence            998876432                      2222333322111122337887654433211                  


Q ss_pred             HHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccE
Q 024338          188 KTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQV  260 (269)
Q Consensus       188 ~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~  260 (269)
                      +.-.......+....-|..|++..+-..+                 +.+=+|+++.++.-..++...++.|++
T Consensus       119 ~~~~~~~~~~~~~~~~i~lgf~~~~~~~r-----------------wlt~~ei~~gv~~~~~~~~~~~~~g~~  174 (177)
T PRK08309        119 RIPSEKIGPARCSYRRVILGFVLEDTYSR-----------------WLTHEEISDGVIKAIESDADEHVVGTV  174 (177)
T ss_pred             hhhhhhhhhcCCceEEEEEeEEEeCCccc-----------------cCchHHHHHHHHHHHhcCCCeEEEEEe
Confidence            11112333445677888999887664333                 446788888888888887777777754

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.36  E-value=4e-11  Score=102.92  Aligned_cols=166  Identities=20%  Similarity=0.251  Sum_probs=118.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcC-CcEEEEecCCHH--HHHHHHHHHH-------HcCCcEEEEEccCC------CHHH
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAG-CKVLVNYARSSK--EAEEVCKEIE-------ASGGQALTFGGDVS------KEAD   90 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G-~~v~i~~~r~~~--~~~~~~~~l~-------~~~~~~~~~~~Dls------~~~~   90 (269)
                      +++|+|||||.+|..+..+|+.+- ++|+-+++.+.+  ..+++.+.+.       ....++.++.+|++      +...
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            579999999999999999998764 577776665543  2344444443       34678999999998      3444


Q ss_pred             HHHHHHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCC
Q 024338           91 VESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGN  170 (269)
Q Consensus        91 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~  170 (269)
                      .+++.+       .+|.+|||++..+--       ....+....|+.|+..+++.+.    ..+.+.+.+|||++..-..
T Consensus        81 ~~~La~-------~vD~I~H~gA~Vn~v-------~pYs~L~~~NVlGT~evlrLa~----~gk~Kp~~yVSsisv~~~~  142 (382)
T COG3320          81 WQELAE-------NVDLIIHNAALVNHV-------FPYSELRGANVLGTAEVLRLAA----TGKPKPLHYVSSISVGETE  142 (382)
T ss_pred             HHHHhh-------hcceEEecchhhccc-------CcHHHhcCcchHhHHHHHHHHh----cCCCceeEEEeeeeecccc
Confidence            445444       689999999875421       2457788899999777776654    2344569999998653211


Q ss_pred             --------------------CCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcc
Q 024338          171 --------------------IGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMT  214 (269)
Q Consensus       171 --------------------~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~  214 (269)
                                          ...+.|+-||++.+.+++..    .+.|+++..+.||++-.+-.
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A----~~rGLpv~I~Rpg~I~gds~  202 (382)
T COG3320         143 YYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREA----GDRGLPVTIFRPGYITGDSR  202 (382)
T ss_pred             ccCCCccccccccccccccCccCCCcchhHHHHHHHHHHH----hhcCCCeEEEecCeeeccCc
Confidence                                12367999999777776644    44599999999999876643

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=99.35  E-value=6.6e-10  Score=84.24  Aligned_cols=214  Identities=16%  Similarity=0.124  Sum_probs=143.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC--
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG--  103 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~--  103 (269)
                      -.+|+|-||-+.+|.+|+..|-.+++-|.-+.-...++.           +.-.++..|-+=.++-+.++++.-+.++  
T Consensus         3 agrVivYGGkGALGSacv~~FkannywV~siDl~eNe~A-----------d~sI~V~~~~swtEQe~~v~~~vg~sL~ge   71 (236)
T KOG4022|consen    3 AGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQA-----------DSSILVDGNKSWTEQEQSVLEQVGSSLQGE   71 (236)
T ss_pred             CceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccccc-----------cceEEecCCcchhHHHHHHHHHHHHhhccc
Confidence            457899999999999999999999988775322111111           1222455555556677777777766553  


Q ss_pred             CccEEEEccCCCCCCcccCC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHH
Q 024338          104 TVDILINNAGITRDTLLMRM-KKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAG  182 (269)
Q Consensus       104 ~id~li~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  182 (269)
                      ++|.++|.||...-+.-..- -....+-++.-.+.......+....++  +.+|.+-..+.-++.-+.|++-.|+++|+|
T Consensus        72 kvDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HL--K~GGLL~LtGAkaAl~gTPgMIGYGMAKaA  149 (236)
T KOG4022|consen   72 KVDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHL--KPGGLLQLTGAKAALGGTPGMIGYGMAKAA  149 (236)
T ss_pred             ccceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhcc--CCCceeeecccccccCCCCcccchhHHHHH
Confidence            79999999986533221110 011233344444444444455555555  456677777777788899999999999999


Q ss_pred             HHHHHHHHHHHhc--cCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccE
Q 024338          183 VIGLTKTVAKEYA--SRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQV  260 (269)
Q Consensus       183 l~~~~~~la~e~~--~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~  260 (269)
                      ++.++++|+.+-.  +.|-.+.+|-|-..+|||.+.+.++.        ....+.+.+.+++..+.-... ..+--+|..
T Consensus       150 VHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKwMP~A--------DfssWTPL~fi~e~flkWtt~-~~RPssGsL  220 (236)
T KOG4022|consen  150 VHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKWMPNA--------DFSSWTPLSFISEHFLKWTTE-TSRPSSGSL  220 (236)
T ss_pred             HHHHHHHhcccccCCCCCceeEEEeeeeccCccccccCCCC--------cccCcccHHHHHHHHHHHhcc-CCCCCCCce
Confidence            9999999998743  45788899999999999988765432        233455678888776665532 334456654


Q ss_pred             E
Q 024338          261 L  261 (269)
Q Consensus       261 i  261 (269)
                      +
T Consensus       221 l  221 (236)
T KOG4022|consen  221 L  221 (236)
T ss_pred             E
Confidence            4

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.32  E-value=8e-10  Score=113.32  Aligned_cols=222  Identities=20%  Similarity=0.217  Sum_probs=138.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcC----CcEEEEecCCHH---HHHHHHHHHHHc-------CCcEEEEEccCCCHHH
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAG----CKVLVNYARSSK---EAEEVCKEIEAS-------GGQALTFGGDVSKEAD   90 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G----~~v~i~~~r~~~---~~~~~~~~l~~~-------~~~~~~~~~Dls~~~~   90 (269)
                      ..++++|||++|.||.++++.|+++|    .+|+.+ .|+..   ..+++.+.+...       ..++.++.+|++++.-
T Consensus       970 ~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l-~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~l 1048 (1389)
T TIGR03443       970 TPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAH-VRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKF 1048 (1389)
T ss_pred             CCceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEE-ECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccC
Confidence            35899999999999999999999987    566654 45432   222332222211       2368889999985420


Q ss_pred             --HHHHHHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcccc
Q 024338           91 --VESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLV  168 (269)
Q Consensus        91 --~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~  168 (269)
                        -...++++.   ..+|++||||+.....    .   .++.....|+.++..+++.+..    .+..+++++||.....
T Consensus      1049 gl~~~~~~~l~---~~~d~iiH~Aa~~~~~----~---~~~~~~~~nv~gt~~ll~~a~~----~~~~~~v~vSS~~v~~ 1114 (1389)
T TIGR03443      1049 GLSDEKWSDLT---NEVDVIIHNGALVHWV----Y---PYSKLRDANVIGTINVLNLCAE----GKAKQFSFVSSTSALD 1114 (1389)
T ss_pred             CcCHHHHHHHH---hcCCEEEECCcEecCc----c---CHHHHHHhHHHHHHHHHHHHHh----CCCceEEEEeCeeecC
Confidence              011122222   2789999999865321    1   2344556799998888877643    3456899999975431


Q ss_pred             C-----------------C-----------CCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc--C
Q 024338          169 G-----------------N-----------IGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL--G  218 (269)
Q Consensus       169 ~-----------------~-----------~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~--~  218 (269)
                      .                 .           .....|+.||.+.+.+++..+    ..|+.+..+.||.+..+.....  .
T Consensus      1115 ~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~----~~g~~~~i~Rpg~v~G~~~~g~~~~ 1190 (1389)
T TIGR03443      1115 TEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAG----KRGLRGCIVRPGYVTGDSKTGATNT 1190 (1389)
T ss_pred             cccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHH----hCCCCEEEECCCccccCCCcCCCCc
Confidence            1                 0           012459999999888877643    2489999999999987643221  1


Q ss_pred             hHHHHHHHh------cCCC----CCCCCHHHHHHHHHHhccCCCCCCccccEEEecCC
Q 024338          219 EDLEKKILE------KIPL----GRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGG  266 (269)
Q Consensus       219 ~~~~~~~~~------~~~~----~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg  266 (269)
                      .++......      ..|.    ..+.++++++++++.++..+.. ...+.++.+.++
T Consensus      1191 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~Vddva~ai~~~~~~~~~-~~~~~i~~~~~~ 1247 (1389)
T TIGR03443      1191 DDFLLRMLKGCIQLGLIPNINNTVNMVPVDHVARVVVAAALNPPK-ESELAVAHVTGH 1247 (1389)
T ss_pred             hhHHHHHHHHHHHhCCcCCCCCccccccHHHHHHHHHHHHhCCcc-cCCCCEEEeCCC
Confidence            122211111      1121    2356799999999999854321 123456666554

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.32  E-value=5.2e-11  Score=97.98  Aligned_cols=221  Identities=14%  Similarity=0.079  Sum_probs=151.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHc--CCcEEEEecCCH-HHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHH
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKA--GCKVLVNYARSS-KEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAV   99 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~--G~~v~i~~~r~~-~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~   99 (269)
                      .+..|.++||||.|.||...+..++..  ..+.+-+..-+- ..+ +.+++. .+..+..++..|+.+...+..++.+  
T Consensus         3 ~~~~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~-~~l~~~-~n~p~ykfv~~di~~~~~~~~~~~~--   78 (331)
T KOG0747|consen    3 TYKEKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNL-KNLEPV-RNSPNYKFVEGDIADADLVLYLFET--   78 (331)
T ss_pred             CCccceEEEecCcCcchhhhhhhcccCCCCCcEEEEeeccccccc-chhhhh-ccCCCceEeeccccchHHHHhhhcc--
Confidence            344599999999999999999999876  233332111110 012 222222 2356789999999998888877764  


Q ss_pred             HhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcccc-----------
Q 024338          100 DAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLV-----------  168 (269)
Q Consensus       100 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~-----------  168 (269)
                         +++|.|+|-|+......    +.-+--+..+.|++++..|++.+....   +..++|++|+..-+-           
T Consensus        79 ---~~id~vihfaa~t~vd~----s~~~~~~~~~nnil~t~~Lle~~~~sg---~i~~fvhvSTdeVYGds~~~~~~~E~  148 (331)
T KOG0747|consen   79 ---EEIDTVIHFAAQTHVDR----SFGDSFEFTKNNILSTHVLLEAVRVSG---NIRRFVHVSTDEVYGDSDEDAVVGEA  148 (331)
T ss_pred             ---CchhhhhhhHhhhhhhh----hcCchHHHhcCCchhhhhHHHHHHhcc---CeeEEEEecccceecCcccccccccc
Confidence               48999999998654321    122334567889999888888876543   446899999865331           


Q ss_pred             -CCCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccc--cChHHHHHHHhcC---------CCCCCCC
Q 024338          169 -GNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAK--LGEDLEKKILEKI---------PLGRYGQ  236 (269)
Q Consensus       169 -~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~--~~~~~~~~~~~~~---------~~~~~~~  236 (269)
                       ...+..+|+++|+|.+++.+++.+.+   |+.+..+.-+-|..|-..+  ..+.++.....+.         ..+++..
T Consensus       149 s~~nPtnpyAasKaAaE~~v~Sy~~sy---~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~rs~l~  225 (331)
T KOG0747|consen  149 SLLNPTNPYAASKAAAEMLVRSYGRSY---GLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTRSYLY  225 (331)
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHhhcc---CCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecCcccceeeEe
Confidence             12356689999999999999998876   8999999999999985322  2233333222222         2245668


Q ss_pred             HHHHHHHHHHhccCCCCCCccccEEEec
Q 024338          237 PEEVAGLVEFLALNPAAGYITGQVLTID  264 (269)
Q Consensus       237 ~~~~a~~~~~l~~~~~~~~~~G~~i~~d  264 (269)
                      ++|+++++...+..  +  -.||++++.
T Consensus       226 veD~~ea~~~v~~K--g--~~geIYNIg  249 (331)
T KOG0747|consen  226 VEDVSEAFKAVLEK--G--ELGEIYNIG  249 (331)
T ss_pred             HHHHHHHHHHHHhc--C--Cccceeecc
Confidence            99999999888743  2  258999874

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.30  E-value=1.4e-10  Score=99.07  Aligned_cols=178  Identities=16%  Similarity=0.133  Sum_probs=111.2

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC-cc
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT-VD  106 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~-id  106 (269)
                      ++|||||+|.+|..++++|.++|++|.++ .|+++...         ...+..+.+|+.|.+++.++++.. +...+ +|
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~-~R~~~~~~---------~~~~~~~~~d~~d~~~l~~a~~~~-~~~~g~~d   69 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVA-SRSSSSSA---------GPNEKHVKFDWLDEDTWDNPFSSD-DGMEPEIS   69 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEE-eCCCcccc---------CCCCccccccCCCHHHHHHHHhcc-cCcCCcee
Confidence            38999999999999999999999999885 67655321         124556788999999999988653 33335 99


Q ss_pred             EEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHHHHH
Q 024338          107 ILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGL  186 (269)
Q Consensus       107 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~~  186 (269)
                      .++++++....         ..+            ..+.+++.+++.+..++|++||.....+.+       .+...+.+
T Consensus        70 ~v~~~~~~~~~---------~~~------------~~~~~i~aa~~~gv~~~V~~Ss~~~~~~~~-------~~~~~~~~  121 (285)
T TIGR03649        70 AVYLVAPPIPD---------LAP------------PMIKFIDFARSKGVRRFVLLSASIIEKGGP-------AMGQVHAH  121 (285)
T ss_pred             EEEEeCCCCCC---------hhH------------HHHHHHHHHHHcCCCEEEEeeccccCCCCc-------hHHHHHHH
Confidence            99998863211         000            112344445556778999999865443311       22222222


Q ss_pred             HHHHHHHhcc-CCeEEEEEecCCccCCcccccC-hHHHH--HHHh--cCCCCCCCCHHHHHHHHHHhccCC
Q 024338          187 TKTVAKEYAS-RNINVNAIAPGFIASDMTAKLG-EDLEK--KILE--KIPLGRYGQPEEVAGLVEFLALNP  251 (269)
Q Consensus       187 ~~~la~e~~~-~gi~v~~v~pG~v~t~~~~~~~-~~~~~--~~~~--~~~~~~~~~~~~~a~~~~~l~~~~  251 (269)
                             +.. .|+....+.|+++..++..... ....+  .+..  ......+.+++|+|+++..++..+
T Consensus       122 -------l~~~~gi~~tilRp~~f~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~Dva~~~~~~l~~~  185 (285)
T TIGR03649       122 -------LDSLGGVEYTVLRPTWFMENFSEEFHVEAIRKENKIYSATGDGKIPFVSADDIARVAYRALTDK  185 (285)
T ss_pred             -------HHhccCCCEEEEeccHHhhhhcccccccccccCCeEEecCCCCccCcccHHHHHHHHHHHhcCC
Confidence                   222 3899999999987655422110 00000  0000  111123668999999999998654

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.28  E-value=4.4e-11  Score=98.47  Aligned_cols=215  Identities=18%  Similarity=0.148  Sum_probs=148.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHH----HcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIE----ASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~----~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      +|++||||-+|-=|..+|+.|+++|+.|..+.+|+........ .+.    ....+++.+.+|++|..++.++++++   
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri-~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v---   77 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRI-HLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV---   77 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccc-eeccccccCCceeEEEeccccchHHHHHHHHhc---
Confidence            6999999999999999999999999999997666443222211 221    22446889999999999999999987   


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccc-----------cCC
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGL-----------VGN  170 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~-----------~~~  170 (269)
                        .+|-++|.++.+...    .+.++-+...+++..|+.+++.++.-+-  .+.-++..-||..-+           .|.
T Consensus        78 --~PdEIYNLaAQS~V~----vSFe~P~~T~~~~~iGtlrlLEaiR~~~--~~~~rfYQAStSE~fG~v~~~pq~E~TPF  149 (345)
T COG1089          78 --QPDEIYNLAAQSHVG----VSFEQPEYTADVDAIGTLRLLEAIRILG--EKKTRFYQASTSELYGLVQEIPQKETTPF  149 (345)
T ss_pred             --Cchhheecccccccc----ccccCcceeeeechhHHHHHHHHHHHhC--CcccEEEecccHHhhcCcccCccccCCCC
Confidence              789999999876653    3555667788899999999888775432  234567666664321           345


Q ss_pred             CCChhhHHhHHHHHHHHHHHHHHh---ccCCeEEEEEecCCccCCcccccChHHHHH---HHhcCCC------CCCCCHH
Q 024338          171 IGQANYSAAKAGVIGLTKTVAKEY---ASRNINVNAIAPGFIASDMTAKLGEDLEKK---ILEKIPL------GRYGQPE  238 (269)
Q Consensus       171 ~~~~~Y~~sK~al~~~~~~la~e~---~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~---~~~~~~~------~~~~~~~  238 (269)
                      .+.++|+++|.....++...+..|   +-.||-+|.=+|.-=.|-.+++........   ..+.+.+      +.+..+.
T Consensus       150 yPrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~  229 (345)
T COG1089         150 YPRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAK  229 (345)
T ss_pred             CCCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccchH
Confidence            578899999999888888777665   344777777777544444444332211111   1111112      3456788


Q ss_pred             HHHHHHHHhccCCC
Q 024338          239 EVAGLVEFLALNPA  252 (269)
Q Consensus       239 ~~a~~~~~l~~~~~  252 (269)
                      |.+++.+.+++.++
T Consensus       230 DYVe~mwlmLQq~~  243 (345)
T COG1089         230 DYVEAMWLMLQQEE  243 (345)
T ss_pred             HHHHHHHHHHccCC
Confidence            88888888886553

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.28  E-value=1.2e-10  Score=105.86  Aligned_cols=160  Identities=16%  Similarity=0.258  Sum_probs=113.8

Q ss_pred             CCEEE----EeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           26 APVAV----VTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        26 ~k~vl----ItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      +..+|    |+||++|+|.++++.+...|+.|+.+ .+......                                 ...
T Consensus        34 ~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~-~~~~~~~~---------------------------------~~~   79 (450)
T PRK08261         34 GQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVAN-NDGGLTWA---------------------------------AGW   79 (450)
T ss_pred             CCCCCCCceEEccCchhHHHHHHHHhhCCCeeeec-Cccccccc---------------------------------cCc
Confidence            44556    88889999999999999999999874 33322000                                 000


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKA  181 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  181 (269)
                      ..+++.+++-+....       +.+++.        +.+.+.+..++.|  .+.|+||+++|..+..   ....|+++|+
T Consensus        80 ~~~~~~~~~d~~~~~-------~~~~l~--------~~~~~~~~~l~~l--~~~griv~i~s~~~~~---~~~~~~~aka  139 (450)
T PRK08261         80 GDRFGALVFDATGIT-------DPADLK--------ALYEFFHPVLRSL--APCGRVVVLGRPPEAA---ADPAAAAAQR  139 (450)
T ss_pred             CCcccEEEEECCCCC-------CHHHHH--------HHHHHHHHHHHhc--cCCCEEEEEccccccC---CchHHHHHHH
Confidence            113444443221110       112222        3345677777777  4568999999987653   3457999999


Q ss_pred             HHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEE
Q 024338          182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL  261 (269)
Q Consensus       182 al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i  261 (269)
                      ++.+++++++.|+ +.+++++.|.|++                          ..+++++..+.|++ ++.+.+++||.+
T Consensus       140 al~gl~rsla~E~-~~gi~v~~i~~~~--------------------------~~~~~~~~~~~~l~-s~~~a~~~g~~i  191 (450)
T PRK08261        140 ALEGFTRSLGKEL-RRGATAQLVYVAP--------------------------GAEAGLESTLRFFL-SPRSAYVSGQVV  191 (450)
T ss_pred             HHHHHHHHHHHHh-hcCCEEEEEecCC--------------------------CCHHHHHHHHHHhc-CCccCCccCcEE
Confidence            9999999999999 7799999999874                          15789999999998 556779999999


Q ss_pred             EecCCc
Q 024338          262 TIDGGM  267 (269)
Q Consensus       262 ~~dgg~  267 (269)
                      .++++.
T Consensus       192 ~~~~~~  197 (450)
T PRK08261        192 RVGAAD  197 (450)
T ss_pred             EecCCc
Confidence            998875

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.27  E-value=5.4e-10  Score=103.75  Aligned_cols=125  Identities=18%  Similarity=0.256  Sum_probs=86.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC---cEEEEecCCH---HHHHHHHHHH---------HHc---------CCcEE
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGC---KVLVNYARSS---KEAEEVCKEI---------EAS---------GGQAL   79 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~---~v~i~~~r~~---~~~~~~~~~l---------~~~---------~~~~~   79 (269)
                      +++|++|||||+|.||..+++.|++.+.   ++.++ .|..   ...+++.+++         ++.         ..++.
T Consensus       117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~L-vR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~  195 (605)
T PLN02503        117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLL-IKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLV  195 (605)
T ss_pred             hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEE-EecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEE
Confidence            6899999999999999999999998764   34554 3432   2223332222         111         24688


Q ss_pred             EEEccCCCHH------HHHHHHHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC
Q 024338           80 TFGGDVSKEA------DVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKK  153 (269)
Q Consensus        80 ~~~~Dls~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~  153 (269)
                      ++.+|+++++      ..+.+.+       .+|+|||+|+.....       +..+..+++|+.++..+++.+...   .
T Consensus       196 ~v~GDl~d~~LGLs~~~~~~L~~-------~vDiVIH~AA~v~f~-------~~~~~a~~vNV~GT~nLLelA~~~---~  258 (605)
T PLN02503        196 PVVGNVCESNLGLEPDLADEIAK-------EVDVIINSAANTTFD-------ERYDVAIDINTRGPCHLMSFAKKC---K  258 (605)
T ss_pred             EEEeeCCCcccCCCHHHHHHHHh-------cCCEEEECccccccc-------cCHHHHHHHHHHHHHHHHHHHHHc---C
Confidence            8999999862      3333332       689999999875421       357788999999988888876542   2


Q ss_pred             CCCeEEEEcCCcc
Q 024338          154 KKGRIINIASVVG  166 (269)
Q Consensus       154 ~~~~iv~isS~~~  166 (269)
                      ...++|++||...
T Consensus       259 ~lk~fV~vSTayV  271 (605)
T PLN02503        259 KLKLFLQVSTAYV  271 (605)
T ss_pred             CCCeEEEccCcee
Confidence            3457999998643

>PLN00016 RNA-binding protein; Provisional

Probab=99.26  E-value=5.5e-10  Score=99.34  Aligned_cols=197  Identities=19%  Similarity=0.224  Sum_probs=121.8

Q ss_pred             CCCCEEEEe----CCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHH-------HHHHHHcCCcEEEEEccCCCHHHHH
Q 024338           24 VEAPVAVVT----GASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEV-------CKEIEASGGQALTFGGDVSKEADVE   92 (269)
Q Consensus        24 ~~~k~vlIt----Gas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~-------~~~l~~~~~~~~~~~~Dls~~~~~~   92 (269)
                      ...++||||    ||+|.||..+++.|+++|++|+++ .|+......+       ..++..  ..+.++.+|++|   +.
T Consensus        50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l-~R~~~~~~~~~~~~~~~~~~l~~--~~v~~v~~D~~d---~~  123 (378)
T PLN00016         50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLF-TRGKEPSQKMKKEPFSRFSELSS--AGVKTVWGDPAD---VK  123 (378)
T ss_pred             cccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEE-ecCCcchhhhccCchhhhhHhhh--cCceEEEecHHH---HH
Confidence            445789999    999999999999999999999986 5554332211       112221  247788889876   33


Q ss_pred             HHHHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCC
Q 024338           93 SMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIG  172 (269)
Q Consensus        93 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~  172 (269)
                      +++.     ..++|+|||+++..         .           .+    ++.++..+++.+..++|++||...+.....
T Consensus       124 ~~~~-----~~~~d~Vi~~~~~~---------~-----------~~----~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~  174 (378)
T PLN00016        124 SKVA-----GAGFDVVYDNNGKD---------L-----------DE----VEPVADWAKSPGLKQFLFCSSAGVYKKSDE  174 (378)
T ss_pred             hhhc-----cCCccEEEeCCCCC---------H-----------HH----HHHHHHHHHHcCCCEEEEEccHhhcCCCCC
Confidence            3221     13789999997621         1           12    223334444456679999999865432111


Q ss_pred             --------ChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC-hHHHHHHHhcCCC---------CCC
Q 024338          173 --------QANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG-EDLEKKILEKIPL---------GRY  234 (269)
Q Consensus       173 --------~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~-~~~~~~~~~~~~~---------~~~  234 (269)
                              ...+. +|...+.+.+       ..++.+..+.|+.+..+...... ..+......+.+.         ..+
T Consensus       175 ~p~~E~~~~~p~~-sK~~~E~~l~-------~~~l~~~ilRp~~vyG~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~~~~  246 (378)
T PLN00016        175 PPHVEGDAVKPKA-GHLEVEAYLQ-------KLGVNWTSFRPQYIYGPGNNKDCEEWFFDRLVRGRPVPIPGSGIQLTQL  246 (378)
T ss_pred             CCCCCCCcCCCcc-hHHHHHHHHH-------HcCCCeEEEeceeEECCCCCCchHHHHHHHHHcCCceeecCCCCeeece
Confidence                    11122 6877766543       24799999999999988533211 2222222222111         134


Q ss_pred             CCHHHHHHHHHHhccCCCCCCccccEEEecCC
Q 024338          235 GQPEEVAGLVEFLALNPAAGYITGQVLTIDGG  266 (269)
Q Consensus       235 ~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg  266 (269)
                      ..++|+|+++..++..+.   ..|+++++.++
T Consensus       247 i~v~Dva~ai~~~l~~~~---~~~~~yni~~~  275 (378)
T PLN00016        247 GHVKDLASMFALVVGNPK---AAGQIFNIVSD  275 (378)
T ss_pred             ecHHHHHHHHHHHhcCcc---ccCCEEEecCC
Confidence            579999999999985532   34788888765

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.26  E-value=4.5e-10  Score=95.92  Aligned_cols=203  Identities=17%  Similarity=0.106  Sum_probs=114.4

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCccEE
Q 024338           29 AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDIL  108 (269)
Q Consensus        29 vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l  108 (269)
                      +|||||+|.||.++++.|+++|++|+++ .|+.+.......        .  ...|+.. .       ...+.+.++|+|
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~--------~--~~~~~~~-~-------~~~~~~~~~D~V   61 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTIL-TRSPPAGANTKW--------E--GYKPWAP-L-------AESEALEGADAV   61 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEE-eCCCCCCCcccc--------e--eeecccc-c-------chhhhcCCCCEE
Confidence            6899999999999999999999999885 565543322110        0  0112222 1       112333579999


Q ss_pred             EEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC--CeEEEEcCCcccc-----CC-----C-CChh
Q 024338          109 INNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKK--GRIINIASVVGLV-----GN-----I-GQAN  175 (269)
Q Consensus       109 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~--~~iv~isS~~~~~-----~~-----~-~~~~  175 (269)
                      ||+|+.....  .....+..+..+++|+.++..+++++..    .+.  ..+++.|+...+-     +.     + +...
T Consensus        62 vh~a~~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~~~  135 (292)
T TIGR01777        62 INLAGEPIAD--KRWTEERKQEIRDSRIDTTRALVEAIAA----AEQKPKVFISASAVGYYGTSEDRVFTEEDSPAGDDF  135 (292)
T ss_pred             EECCCCCccc--ccCCHHHHHHHHhcccHHHHHHHHHHHh----cCCCceEEEEeeeEEEeCCCCCCCcCcccCCCCCCh
Confidence            9999964321  1234455677889999997777766643    332  2444444432111     00     0 1112


Q ss_pred             hHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHH--------hcCCCCCCCCHHHHHHHHHHh
Q 024338          176 YSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKIL--------EKIPLGRYGQPEEVAGLVEFL  247 (269)
Q Consensus       176 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~a~~~~~l  247 (269)
                      |+..+...+...+    .....++.+..+.|+.+..|... ..........        .......+..++|+|+++..+
T Consensus       136 ~~~~~~~~e~~~~----~~~~~~~~~~ilR~~~v~G~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~i~v~Dva~~i~~~  210 (292)
T TIGR01777       136 LAELCRDWEEAAQ----AAEDLGTRVVLLRTGIVLGPKGG-ALAKMLPPFRLGLGGPLGSGRQWFSWIHIEDLVQLILFA  210 (292)
T ss_pred             HHHHHHHHHHHhh----hchhcCCceEEEeeeeEECCCcc-hhHHHHHHHhcCcccccCCCCcccccEeHHHHHHHHHHH
Confidence            3333333322222    23345799999999999887421 1111111111        011123466899999999999


Q ss_pred             ccCCCCCCccccEEEecC
Q 024338          248 ALNPAAGYITGQVLTIDG  265 (269)
Q Consensus       248 ~~~~~~~~~~G~~i~~dg  265 (269)
                      +..+.   ..| ++++-+
T Consensus       211 l~~~~---~~g-~~~~~~  224 (292)
T TIGR01777       211 LENAS---ISG-PVNATA  224 (292)
T ss_pred             hcCcc---cCC-ceEecC
Confidence            85432   223 555544

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PRK12320 hypothetical protein; Provisional

Probab=99.26  E-value=9.3e-10  Score=103.43  Aligned_cols=183  Identities=16%  Similarity=0.149  Sum_probs=117.2

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCccE
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDI  107 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~  107 (269)
                      ++|||||+|.||.+++++|.++|++|+++ .|.....         ....+.++.+|+++.. +.+++.       ++|+
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~l-dr~~~~~---------~~~~ve~v~~Dl~d~~-l~~al~-------~~D~   63 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHTVSGI-AQHPHDA---------LDPRVDYVCASLRNPV-LQELAG-------EADA   63 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEE-eCChhhc---------ccCCceEEEccCCCHH-HHHHhc-------CCCE
Confidence            59999999999999999999999999885 4543211         1235778999999873 433332       6899


Q ss_pred             EEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHHHHHH
Q 024338          108 LINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLT  187 (269)
Q Consensus       108 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~  187 (269)
                      +||+|+.....            ...+|+.++.++++++..    .+ .++|++||..+.   +  ..|..        .
T Consensus        64 VIHLAa~~~~~------------~~~vNv~Gt~nLleAA~~----~G-vRiV~~SS~~G~---~--~~~~~--------a  113 (699)
T PRK12320         64 VIHLAPVDTSA------------PGGVGITGLAHVANAAAR----AG-ARLLFVSQAAGR---P--ELYRQ--------A  113 (699)
T ss_pred             EEEcCccCccc------------hhhHHHHHHHHHHHHHHH----cC-CeEEEEECCCCC---C--ccccH--------H
Confidence            99999863211            124788998888777643    33 489999987431   1  12321        2


Q ss_pred             HHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHH----hcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEEEe
Q 024338          188 KTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKIL----EKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTI  263 (269)
Q Consensus       188 ~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~  263 (269)
                      +.+..+   .++.+..+.|+.+..+............+.    ...++. +..++|++++++.+++.+    .+| ++++
T Consensus       114 E~ll~~---~~~p~~ILR~~nVYGp~~~~~~~r~I~~~l~~~~~~~pI~-vIyVdDvv~alv~al~~~----~~G-iyNI  184 (699)
T PRK12320        114 ETLVST---GWAPSLVIRIAPPVGRQLDWMVCRTVATLLRSKVSARPIR-VLHLDDLVRFLVLALNTD----RNG-VVDL  184 (699)
T ss_pred             HHHHHh---cCCCEEEEeCceecCCCCcccHhHHHHHHHHHHHcCCceE-EEEHHHHHHHHHHHHhCC----CCC-EEEE
Confidence            222222   247888999998888743322122222222    222221 237999999999888532    134 8888


Q ss_pred             cCCc
Q 024338          264 DGGM  267 (269)
Q Consensus       264 dgg~  267 (269)
                      .+|.
T Consensus       185 G~~~  188 (699)
T PRK12320        185 ATPD  188 (699)
T ss_pred             eCCC
Confidence            7764

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.23  E-value=9e-10  Score=104.97  Aligned_cols=142  Identities=18%  Similarity=0.171  Sum_probs=98.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTV  105 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i  105 (269)
                      .+++|||||+|.||+++++.|.++|++|.+                         ...|++|.+++.+.+.+.     ++
T Consensus       380 ~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~-------------------------~~~~l~d~~~v~~~i~~~-----~p  429 (668)
T PLN02260        380 SLKFLIYGRTGWIGGLLGKLCEKQGIAYEY-------------------------GKGRLEDRSSLLADIRNV-----KP  429 (668)
T ss_pred             CceEEEECCCchHHHHHHHHHHhCCCeEEe-------------------------eccccccHHHHHHHHHhh-----CC
Confidence            357999999999999999999999988632                         113677888777776653     78


Q ss_pred             cEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcccc-----------C-----
Q 024338          106 DILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLV-----------G-----  169 (269)
Q Consensus       106 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~-----------~-----  169 (269)
                      |+|||+|+....... +...++-+..+++|+.++..+++++..    .+ .+++++||...+-           +     
T Consensus       430 d~Vih~Aa~~~~~~~-~~~~~~~~~~~~~N~~gt~~l~~a~~~----~g-~~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~  503 (668)
T PLN02260        430 THVFNAAGVTGRPNV-DWCESHKVETIRANVVGTLTLADVCRE----NG-LLMMNFATGCIFEYDAKHPEGSGIGFKEED  503 (668)
T ss_pred             CEEEECCcccCCCCC-ChHHhCHHHHHHHHhHHHHHHHHHHHH----cC-CeEEEEcccceecCCcccccccCCCCCcCC
Confidence            999999997542111 122345578899999999999998864    22 3566666543210           1     


Q ss_pred             --CCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEec
Q 024338          170 --NIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP  206 (269)
Q Consensus       170 --~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~p  206 (269)
                        .+....|+.||.+.+.+++....   ...+|+..+..
T Consensus       504 ~~~~~~~~Yg~sK~~~E~~~~~~~~---~~~~r~~~~~~  539 (668)
T PLN02260        504 KPNFTGSFYSKTKAMVEELLREYDN---VCTLRVRMPIS  539 (668)
T ss_pred             CCCCCCChhhHHHHHHHHHHHhhhh---heEEEEEEecc
Confidence              12236799999999998876532   22466665553

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=99.19  E-value=5.5e-10  Score=92.03  Aligned_cols=207  Identities=14%  Similarity=0.053  Sum_probs=137.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      ...++++++||||.|.||.++|..|..+|+.|+++.--.....+.+.-..  ....+..+.-|+..     .++.     
T Consensus        23 ~p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~--~~~~fel~~hdv~~-----pl~~-----   90 (350)
T KOG1429|consen   23 KPSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWI--GHPNFELIRHDVVE-----PLLK-----   90 (350)
T ss_pred             cCCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhc--cCcceeEEEeechh-----HHHH-----
Confidence            45678999999999999999999999999999885333322222221111  12344445555543     3444     


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccc--------------
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGL--------------  167 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~--------------  167 (269)
                        .+|.++|.|+...+..+...+    -..+..|+.++.+.+..+..     -+.|++..|+..-+              
T Consensus        91 --evD~IyhLAapasp~~y~~np----vktIktN~igtln~lglakr-----v~aR~l~aSTseVYgdp~~hpq~e~ywg  159 (350)
T KOG1429|consen   91 --EVDQIYHLAAPASPPHYKYNP----VKTIKTNVIGTLNMLGLAKR-----VGARFLLASTSEVYGDPLVHPQVETYWG  159 (350)
T ss_pred             --HhhhhhhhccCCCCcccccCc----cceeeecchhhHHHHHHHHH-----hCceEEEeecccccCCcccCCCcccccc
Confidence              578899998876553332222    34677889998888776643     34688888876433              


Q ss_pred             --cCCCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccCh----HHHHHHHhcCCC---------C
Q 024338          168 --VGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGE----DLEKKILEKIPL---------G  232 (269)
Q Consensus       168 --~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~----~~~~~~~~~~~~---------~  232 (269)
                        .+....++|.-.|.+.+-++....   +..||.+....+.-+..|.+.-.+.    .+........|+         +
T Consensus       160 ~vnpigpr~cydegKr~aE~L~~~y~---k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtR  236 (350)
T KOG1429|consen  160 NVNPIGPRSCYDEGKRVAETLCYAYH---KQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTR  236 (350)
T ss_pred             ccCcCCchhhhhHHHHHHHHHHHHhh---cccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceE
Confidence              123356789999997777766544   3458999888888888886544333    333333333343         4


Q ss_pred             CCCCHHHHHHHHHHhccCCCCC
Q 024338          233 RYGQPEEVAGLVEFLALNPAAG  254 (269)
Q Consensus       233 ~~~~~~~~a~~~~~l~~~~~~~  254 (269)
                      .++.+.|+.+.++.|..++..+
T Consensus       237 SF~yvsD~Vegll~Lm~s~~~~  258 (350)
T KOG1429|consen  237 SFQYVSDLVEGLLRLMESDYRG  258 (350)
T ss_pred             EEEeHHHHHHHHHHHhcCCCcC
Confidence            5778999999999999777653

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=99.17  E-value=7.9e-11  Score=97.05  Aligned_cols=102  Identities=18%  Similarity=0.209  Sum_probs=78.5

Q ss_pred             CEEEEeCC-CCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Q 024338           27 PVAVVTGA-SRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTV  105 (269)
Q Consensus        27 k~vlItGa-s~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i  105 (269)
                      .+=.||.. +||||+++|+.|+++|++|+++ ++.. .       +....    ...+|+++.++++++++++.+.++++
T Consensus        15 ~VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv-~~~~-~-------l~~~~----~~~~Dv~d~~s~~~l~~~v~~~~g~i   81 (227)
T TIGR02114        15 SVRSITNHSTGHLGKIITETFLSAGHEVTLV-TTKR-A-------LKPEP----HPNLSIREIETTKDLLITLKELVQEH   81 (227)
T ss_pred             CceeecCCcccHHHHHHHHHHHHCCCEEEEE-cChh-h-------ccccc----CCcceeecHHHHHHHHHHHHHHcCCC
Confidence            45566666 5789999999999999999885 4421 1       11000    24589999999999999999999999


Q ss_pred             cEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHH
Q 024338          106 DILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQ  144 (269)
Q Consensus       106 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  144 (269)
                      |++|||||+....++.+.+.++|++++..   +.+.+.+
T Consensus        82 DiLVnnAgv~d~~~~~~~s~e~~~~~~~~---~~~~~~~  117 (227)
T TIGR02114        82 DILIHSMAVSDYTPVYMTDLEQVQASDNL---NEFLSKQ  117 (227)
T ss_pred             CEEEECCEeccccchhhCCHHHHhhhcch---hhhhccc
Confidence            99999999887778888999999988554   4444443

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.02  E-value=1.7e-09  Score=89.15  Aligned_cols=198  Identities=20%  Similarity=0.225  Sum_probs=113.3

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCccEE
Q 024338           29 AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDIL  108 (269)
Q Consensus        29 vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l  108 (269)
                      ++||||+|-||++++..|.+.|+.|+++ .|++...+....      ..+       ...+.    +.+..+.  ++|+|
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~il-tR~~~~~~~~~~------~~v-------~~~~~----~~~~~~~--~~Dav   60 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTIL-TRRPPKASQNLH------PNV-------TLWEG----LADALTL--GIDAV   60 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEE-EcCCcchhhhcC------ccc-------cccch----hhhcccC--CCCEE
Confidence            5899999999999999999999999996 555543332111      001       01111    1121111  79999


Q ss_pred             EEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-CCCCeEEEEcCCccccCCCCChhhHHhHHH----H
Q 024338          109 INNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMK-KKKGRIINIASVVGLVGNIGQANYSAAKAG----V  183 (269)
Q Consensus       109 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a----l  183 (269)
                      ||.||......  ..+.+.-++.++.-+..    ++.+...+.+ +++.++..=+|..|+++......|.=....    +
T Consensus        61 INLAG~~I~~r--rWt~~~K~~i~~SRi~~----T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fl  134 (297)
T COG1090          61 INLAGEPIAER--RWTEKQKEEIRQSRINT----TEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFL  134 (297)
T ss_pred             EECCCCccccc--cCCHHHHHHHHHHHhHH----HHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCCChH
Confidence            99999654321  13555666666665555    5555554442 344555555666677766544443322222    3


Q ss_pred             HHHHHHHHHHh---ccCCeEEEEEecCCccCCccccc---ChHHH----HHHHhcCCCCCCCCHHHHHHHHHHhccCCC
Q 024338          184 IGLTKTVAKEY---ASRNINVNAIAPGFIASDMTAKL---GEDLE----KKILEKIPLGRYGQPEEVAGLVEFLALNPA  252 (269)
Q Consensus       184 ~~~~~~la~e~---~~~gi~v~~v~pG~v~t~~~~~~---~~~~~----~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~  252 (269)
                      ..+|+.+-.+-   ...|+||+.+.-|.|-.+-....   .+.+.    ..+-++-.+-++-..||.++.+.|+.++..
T Consensus       135 a~lc~~WE~~a~~a~~~gtRvvllRtGvVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~~SWIhieD~v~~I~fll~~~~  213 (297)
T COG1090         135 AQLCQDWEEEALQAQQLGTRVVLLRTGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQWFSWIHIEDLVNAILFLLENEQ  213 (297)
T ss_pred             HHHHHHHHHHHhhhhhcCceEEEEEEEEEecCCCcchhhhcchhhhccCCccCCCCceeeeeeHHHHHHHHHHHHhCcC
Confidence            33444333332   23489999999998877532211   11110    011111122235579999999999996543

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=98.97  E-value=8.6e-08  Score=86.75  Aligned_cols=225  Identities=19%  Similarity=0.145  Sum_probs=144.6

Q ss_pred             cCCCCCCEEEEeCCC-CchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHc----CCcEEEEEccCCCHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGAS-RGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS----GGQALTFGGDVSKEADVESMI   95 (269)
Q Consensus        21 ~~~~~~k~vlItGas-~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dls~~~~~~~~~   95 (269)
                      .-.+.+|++|||||+ +.||.+++..|+..|+.|+++.+|-.+.-.++.+.|...    +...-++..++++..+++.++
T Consensus       391 ~~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlI  470 (866)
T COG4982         391 GGTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALI  470 (866)
T ss_pred             CCCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHH
Confidence            456788999999999 789999999999999999998887766666777777543    456778899999999999999


Q ss_pred             HHHHHhcC--------------CccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC---CCeE
Q 024338           96 KTAVDAWG--------------TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK---KGRI  158 (269)
Q Consensus        96 ~~~~~~~~--------------~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~~~i  158 (269)
                      +.|-+...              .+|.+|--|+....+.+.+... .-+..+.+-+.+...++-.+.+.-.++.   .-++
T Consensus       471 ewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~ags-raE~~~rilLw~V~Rliggl~~~~s~r~v~~R~hV  549 (866)
T COG4982         471 EWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGS-RAEFAMRILLWNVLRLIGGLKKQGSSRGVDTRLHV  549 (866)
T ss_pred             HHhccccccccCCcceecccccCcceeeecccCCccCccccCCc-hHHHHHHHHHHHHHHHHHHhhhhccccCcccceEE
Confidence            98844211              3677888887766665555543 2233333434443444444433322221   1234


Q ss_pred             EEEcCCccccCCCCChhhHHhHHHHHHHHHHHHHHhc-cCCeEEEEEecCCccCC-cccccChHHHHHHHhcCCCCCCCC
Q 024338          159 INIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYA-SRNINVNAIAPGFIASD-MTAKLGEDLEKKILEKIPLGRYGQ  236 (269)
Q Consensus       159 v~isS~~~~~~~~~~~~Y~~sK~al~~~~~~la~e~~-~~gi~v~~v~pG~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~  236 (269)
                      |.-.|- -.-.+.+-+.|+-||++++.....+..|-. ...+.+..-.-|+++.- ++...  +..-...++.-.. .-+
T Consensus       550 VLPgSP-NrG~FGgDGaYgEsK~aldav~~RW~sEs~Wa~~vsl~~A~IGWtrGTGLMg~N--diiv~aiEk~GV~-tyS  625 (866)
T COG4982         550 VLPGSP-NRGMFGGDGAYGESKLALDAVVNRWHSESSWAARVSLAHALIGWTRGTGLMGHN--DIIVAAIEKAGVR-TYS  625 (866)
T ss_pred             EecCCC-CCCccCCCcchhhHHHHHHHHHHHhhccchhhHHHHHhhhheeeeccccccCCc--chhHHHHHHhCce-ecC
Confidence            443331 111233667899999999999888877642 22366666667888754 33222  1122222222222 227


Q ss_pred             HHHHHHHHHHhccC
Q 024338          237 PEEVAGLVEFLALN  250 (269)
Q Consensus       237 ~~~~a~~~~~l~~~  250 (269)
                      ++++|..++-|++.
T Consensus       626 ~~EmA~~LLgL~sa  639 (866)
T COG4982         626 TDEMAFNLLGLASA  639 (866)
T ss_pred             HHHHHHHHHhhccH
Confidence            89999999999854

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=98.94  E-value=6.2e-09  Score=99.50  Aligned_cols=187  Identities=20%  Similarity=0.263  Sum_probs=150.7

Q ss_pred             hhhcccccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHH---HHHHHHHHHHcCCcEEEEEccCCCHHH
Q 024338           14 EQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKE---AEEVCKEIEASGGQALTFGGDVSKEAD   90 (269)
Q Consensus        14 ~~~~~~~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~---~~~~~~~l~~~~~~~~~~~~Dls~~~~   90 (269)
                      ...+.+.++  ..|..+|+||-||.|.+++..|..+|++.+++.+|+--+   .......+++.+.++.+-..|++..+.
T Consensus      1758 ~AI~rt~~h--peksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~g 1835 (2376)
T KOG1202|consen 1758 SAIPRTYCH--PEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEG 1835 (2376)
T ss_pred             hhcchhhcC--ccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhh
Confidence            333443333  369999999999999999999999999999888887432   223455567778888888999999999


Q ss_pred             HHHHHHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCC
Q 024338           91 VESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGN  170 (269)
Q Consensus        91 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~  170 (269)
                      .++++++. .+.+++..++|.|....+..+++.+.+.++..-+..+.++.++-+...+..  ..-..+|.+||+.+-++.
T Consensus      1836 a~~Li~~s-~kl~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C--~~LdyFv~FSSvscGRGN 1912 (2376)
T KOG1202|consen 1836 ARGLIEES-NKLGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREIC--PELDYFVVFSSVSCGRGN 1912 (2376)
T ss_pred             HHHHHHHh-hhcccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhC--cccceEEEEEeecccCCC
Confidence            99998765 456899999999998888889999999999999999999999887765544  244689999999999999


Q ss_pred             CCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCc
Q 024338          171 IGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFI  209 (269)
Q Consensus       171 ~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v  209 (269)
                      .++.-|+-++++.+-+++.-..+    |..-.+|.-|.+
T Consensus      1913 ~GQtNYG~aNS~MERiceqRr~~----GfPG~AiQWGAI 1947 (2376)
T KOG1202|consen 1913 AGQTNYGLANSAMERICEQRRHE----GFPGTAIQWGAI 1947 (2376)
T ss_pred             CcccccchhhHHHHHHHHHhhhc----CCCcceeeeecc
Confidence            99999999999999998865443    555556666644

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=98.80  E-value=2.7e-07  Score=76.47  Aligned_cols=206  Identities=20%  Similarity=0.238  Sum_probs=136.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHH--HHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAE--EVCKEIEASGGQALTFGGDVSKEADVESMIKTAV   99 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~--~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~   99 (269)
                      .+++|-++-|.||+|.+|+.++.+|++.|..+++-.+-++....  +...+|    +++.++..|+.|+++++++++   
T Consensus        57 sS~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdL----GQvl~~~fd~~DedSIr~vvk---  129 (391)
T KOG2865|consen   57 SSVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDL----GQVLFMKFDLRDEDSIRAVVK---  129 (391)
T ss_pred             ccccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccc----cceeeeccCCCCHHHHHHHHH---
Confidence            46888999999999999999999999999999996444443222  222222    578899999999999999998   


Q ss_pred             HhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHh
Q 024338          100 DAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAA  179 (269)
Q Consensus       100 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  179 (269)
                          +-++|||..|.-.+...  .      ..-++|+.++-.+++.+..    .+.-++|.+|+..+..  .+.+-|--|
T Consensus       130 ----~sNVVINLIGrd~eTkn--f------~f~Dvn~~~aerlAricke----~GVerfIhvS~Lganv--~s~Sr~Lrs  191 (391)
T KOG2865|consen  130 ----HSNVVINLIGRDYETKN--F------SFEDVNVHIAERLARICKE----AGVERFIHVSCLGANV--KSPSRMLRS  191 (391)
T ss_pred             ----hCcEEEEeeccccccCC--c------ccccccchHHHHHHHHHHh----hChhheeehhhccccc--cChHHHHHh
Confidence                67999999997544221  1      1345778887777766643    5667999999987553  344556777


Q ss_pred             HHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHH--HhcCCCC--------CCCCHHHHHHHHHHhcc
Q 024338          180 KAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKI--LEKIPLG--------RYGQPEEVAGLVEFLAL  249 (269)
Q Consensus       180 K~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~--~~~~~~~--------~~~~~~~~a~~~~~l~~  249 (269)
                      |++-+--.+   .++.    ....|.|.-+...--+ +...+....  ..-+|+.        ....+-|+|.+|...+.
T Consensus       192 K~~gE~aVr---dafP----eAtIirPa~iyG~eDr-fln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvk  263 (391)
T KOG2865|consen  192 KAAGEEAVR---DAFP----EATIIRPADIYGTEDR-FLNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVK  263 (391)
T ss_pred             hhhhHHHHH---hhCC----cceeechhhhcccchh-HHHHHHHHHHhcCceeeecCCcceeeccEEEehHHHHHHHhcc
Confidence            776554433   2332    3456777766554211 111111111  1122322        22357899999999997


Q ss_pred             CCCCCCccccEEEe
Q 024338          250 NPAAGYITGQVLTI  263 (269)
Q Consensus       250 ~~~~~~~~G~~i~~  263 (269)
                      +|.+   .|.++..
T Consensus       264 Dp~s---~Gktye~  274 (391)
T KOG2865|consen  264 DPDS---MGKTYEF  274 (391)
T ss_pred             Cccc---cCceeee
Confidence            7644   4666654

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.78  E-value=3.8e-08  Score=87.43  Aligned_cols=83  Identities=17%  Similarity=0.182  Sum_probs=63.0

Q ss_pred             CCCCCCEEEEeCC----------------CCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccC
Q 024338           22 QNVEAPVAVVTGA----------------SRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDV   85 (269)
Q Consensus        22 ~~~~~k~vlItGa----------------s~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl   85 (269)
                      .+++||++|||||                ||++|.++|++|+++|++|+++ .++.+ ..     .   ..  ....+|+
T Consensus       184 ~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v-~~~~~-~~-----~---~~--~~~~~dv  251 (399)
T PRK05579        184 KDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLV-SGPVN-LP-----T---PA--GVKRIDV  251 (399)
T ss_pred             cccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEe-CCCcc-cc-----C---CC--CcEEEcc
Confidence            5689999999999                4559999999999999999885 55432 11     0   11  1346799


Q ss_pred             CCHHHHHHHHHHHHHhcCCccEEEEccCCCCCCc
Q 024338           86 SKEADVESMIKTAVDAWGTVDILINNAGITRDTL  119 (269)
Q Consensus        86 s~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~  119 (269)
                      ++.+++.+.+.   +.++++|++|||||+....+
T Consensus       252 ~~~~~~~~~v~---~~~~~~DilI~~Aav~d~~~  282 (399)
T PRK05579        252 ESAQEMLDAVL---AALPQADIFIMAAAVADYRP  282 (399)
T ss_pred             CCHHHHHHHHH---HhcCCCCEEEEccccccccc
Confidence            99888877765   45788999999999865543

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.76  E-value=1.3e-06  Score=73.86  Aligned_cols=193  Identities=20%  Similarity=0.198  Sum_probs=121.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCcc
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVD  106 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id  106 (269)
                      +.+|||||||.+|.+++++|.++|+.|.+ ..|+++....+.       ..+.+...|+.++.++...++       +.|
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~-~~r~~~~~~~~~-------~~v~~~~~d~~~~~~l~~a~~-------G~~   65 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRA-AVRNPEAAAALA-------GGVEVVLGDLRDPKSLVAGAK-------GVD   65 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEE-EEeCHHHHHhhc-------CCcEEEEeccCCHhHHHHHhc-------ccc
Confidence            36899999999999999999999999999 478877766554       467889999999999998887       889


Q ss_pred             EEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHHHHH
Q 024338          107 ILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGL  186 (269)
Q Consensus       107 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~~  186 (269)
                      .+++..+... ...         ..............+...     .+..+++.+|+..+..  .....|..+|...+..
T Consensus        66 ~~~~i~~~~~-~~~---------~~~~~~~~~~~~~a~~a~-----~~~~~~~~~s~~~~~~--~~~~~~~~~~~~~e~~  128 (275)
T COG0702          66 GVLLISGLLD-GSD---------AFRAVQVTAVVRAAEAAG-----AGVKHGVSLSVLGADA--ASPSALARAKAAVEAA  128 (275)
T ss_pred             EEEEEecccc-ccc---------chhHHHHHHHHHHHHHhc-----CCceEEEEeccCCCCC--CCccHHHHHHHHHHHH
Confidence            9888887544 210         111222233333333322     2345677777766554  3456788888877666


Q ss_pred             HHHHHHHhccCCeEEEEEe-cCCccCCcccccChHHHHHHHhcC-----CCC--CCCCHHHHHHHHHHhccCCCCCCccc
Q 024338          187 TKTVAKEYASRNINVNAIA-PGFIASDMTAKLGEDLEKKILEKI-----PLG--RYGQPEEVAGLVEFLALNPAAGYITG  258 (269)
Q Consensus       187 ~~~la~e~~~~gi~v~~v~-pG~v~t~~~~~~~~~~~~~~~~~~-----~~~--~~~~~~~~a~~~~~l~~~~~~~~~~G  258 (269)
                      .++.       |+.-..+. ++++.... ...   .........     +.+  .....++++..+...+..+.   ..|
T Consensus       129 l~~s-------g~~~t~lr~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~i~~~d~a~~~~~~l~~~~---~~~  194 (275)
T COG0702         129 LRSS-------GIPYTTLRRAAFYLGAG-AAF---IEAAEAAGLPVIPRGIGRLSPIAVDDVAEALAAALDAPA---TAG  194 (275)
T ss_pred             HHhc-------CCCeEEEecCeeeeccc-hhH---HHHHHhhCCceecCCCCceeeeEHHHHHHHHHHHhcCCc---ccC
Confidence            5433       55545555 33333221 111   111111111     111  23468999999888885543   456


Q ss_pred             cEEEecC
Q 024338          259 QVLTIDG  265 (269)
Q Consensus       259 ~~i~~dg  265 (269)
                      +++.+-|
T Consensus       195 ~~~~l~g  201 (275)
T COG0702         195 RTYELAG  201 (275)
T ss_pred             cEEEccC
Confidence            7666644

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=98.73  E-value=5.6e-07  Score=74.51  Aligned_cols=196  Identities=19%  Similarity=0.235  Sum_probs=114.5

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCccEE
Q 024338           29 AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDIL  108 (269)
Q Consensus        29 vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l  108 (269)
                      |+|+||+|.+|+.+++.|.+.|+.|.++ .|+..  .+..++++..+.  .++.+|+.|.+++.++++       ++|.|
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l-~R~~~--~~~~~~l~~~g~--~vv~~d~~~~~~l~~al~-------g~d~v   68 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRAL-VRDPS--SDRAQQLQALGA--EVVEADYDDPESLVAALK-------GVDAV   68 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEE-ESSSH--HHHHHHHHHTTT--EEEES-TT-HHHHHHHHT-------TCSEE
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEE-Eeccc--hhhhhhhhcccc--eEeecccCCHHHHHHHHc-------CCceE
Confidence            6899999999999999999999999996 45542  123444554444  457999999999988887       89999


Q ss_pred             EEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCC--C--ChhhHHhHHHHH
Q 024338          109 INNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNI--G--QANYSAAKAGVI  184 (269)
Q Consensus       109 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~--~--~~~Y~~sK~al~  184 (269)
                      |++.+.....     .           ......+++++..    .+-.++|+ ||........  .  ...+-..|..++
T Consensus        69 ~~~~~~~~~~-----~-----------~~~~~~li~Aa~~----agVk~~v~-ss~~~~~~~~~~~~p~~~~~~~k~~ie  127 (233)
T PF05368_consen   69 FSVTPPSHPS-----E-----------LEQQKNLIDAAKA----AGVKHFVP-SSFGADYDESSGSEPEIPHFDQKAEIE  127 (233)
T ss_dssp             EEESSCSCCC-----H-----------HHHHHHHHHHHHH----HT-SEEEE-SEESSGTTTTTTSTTHHHHHHHHHHHH
T ss_pred             EeecCcchhh-----h-----------hhhhhhHHHhhhc----cccceEEE-EEecccccccccccccchhhhhhhhhh
Confidence            9998754321     1           1122223444432    34678875 5544333211  1  122334566555


Q ss_pred             HHHHHHHHHhccCCeEEEEEecCCccCCcccccCh--HHHHH---HHhcCCCC---CCC-CHHHHHHHHHHhccCCCCCC
Q 024338          185 GLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGE--DLEKK---ILEKIPLG---RYG-QPEEVAGLVEFLALNPAAGY  255 (269)
Q Consensus       185 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~--~~~~~---~~~~~~~~---~~~-~~~~~a~~~~~l~~~~~~~~  255 (269)
                      ...+       +.++..+.|.||+...........  .....   ..-..+..   .+. +.+|+|+++..++.++. .+
T Consensus       128 ~~l~-------~~~i~~t~i~~g~f~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~-~~  199 (233)
T PF05368_consen  128 EYLR-------ESGIPYTIIRPGFFMENLLPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPE-KH  199 (233)
T ss_dssp             HHHH-------HCTSEBEEEEE-EEHHHHHTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGG-GT
T ss_pred             hhhh-------hccccceeccccchhhhhhhhhcccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChH-Hh
Confidence            4433       238999999999665433221111  00000   00001111   222 67999999999997644 34


Q ss_pred             ccccEEEecC
Q 024338          256 ITGQVLTIDG  265 (269)
Q Consensus       256 ~~G~~i~~dg  265 (269)
                      ..|..+.+-+
T Consensus       200 ~~~~~~~~~~  209 (233)
T PF05368_consen  200 NNGKTIFLAG  209 (233)
T ss_dssp             TEEEEEEEGG
T ss_pred             cCCEEEEeCC
Confidence            4677777644

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.72  E-value=8.9e-08  Score=81.94  Aligned_cols=83  Identities=20%  Similarity=0.328  Sum_probs=64.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCc-EEEEecCCH---HHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHH
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCK-VLVNYARSS---KEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTA   98 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~-v~i~~~r~~---~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~   98 (269)
                      ++++|+++|+|+ ||+|++++..|++.|+. |.+ ..|+.   ++.+++.+++...........+|+++.+++++.++  
T Consensus       123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I-~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~--  198 (289)
T PRK12548        123 DVKGKKLTVIGA-GGAATAIQVQCALDGAKEITI-FNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIA--  198 (289)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEE-EeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhc--
Confidence            567899999999 69999999999999997 666 57775   66777777776554455566789988777665544  


Q ss_pred             HHhcCCccEEEEccCC
Q 024338           99 VDAWGTVDILINNAGI  114 (269)
Q Consensus        99 ~~~~~~id~li~~ag~  114 (269)
                           ..|+||||-..
T Consensus       199 -----~~DilINaTp~  209 (289)
T PRK12548        199 -----SSDILVNATLV  209 (289)
T ss_pred             -----cCCEEEEeCCC
Confidence                 56999999754

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.63  E-value=4.5e-07  Score=73.06  Aligned_cols=85  Identities=20%  Similarity=0.309  Sum_probs=67.4

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      ..++++++++|+||+|++|+.+++.|+++|++|++ ..|+.++.+++.+++.+.. ......+|..+.+++.+.++    
T Consensus        23 ~~~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l-~~R~~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~----   96 (194)
T cd01078          23 GKDLKGKTAVVLGGTGPVGQRAAVLLAREGARVVL-VGRDLERAQKAADSLRARF-GEGVGAVETSDDAARAAAIK----   96 (194)
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEE-EcCCHHHHHHHHHHHHhhc-CCcEEEeeCCCHHHHHHHHh----
Confidence            34788999999999999999999999999998887 5888888888877775321 23355678888888777665    


Q ss_pred             hcCCccEEEEccCC
Q 024338          101 AWGTVDILINNAGI  114 (269)
Q Consensus       101 ~~~~id~li~~ag~  114 (269)
                         +.|++|++...
T Consensus        97 ---~~diVi~at~~  107 (194)
T cd01078          97 ---GADVVFAAGAA  107 (194)
T ss_pred             ---cCCEEEECCCC
Confidence               67988887653

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=98.62  E-value=7.3e-07  Score=78.51  Aligned_cols=172  Identities=20%  Similarity=0.180  Sum_probs=108.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      .+-.+|+|+||+|++|+-+++.|.++|+.|.. ..|+.+..+++.. +.........+..|.....+...-+-   +..+
T Consensus        77 ~~~~~VlVvGatG~vG~~iv~~llkrgf~vra-~VRd~~~a~~~~~-~~~~d~~~~~v~~~~~~~~d~~~~~~---~~~~  151 (411)
T KOG1203|consen   77 KKPTTVLVVGATGKVGRRIVKILLKRGFSVRA-LVRDEQKAEDLLG-VFFVDLGLQNVEADVVTAIDILKKLV---EAVP  151 (411)
T ss_pred             CCCCeEEEecCCCchhHHHHHHHHHCCCeeee-eccChhhhhhhhc-ccccccccceeeeccccccchhhhhh---hhcc
Confidence            35689999999999999999999999999888 4788888877766 11112234445555554444333222   2212


Q ss_pred             -CccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHH
Q 024338          104 -TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAG  182 (269)
Q Consensus       104 -~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  182 (269)
                       ...+++.++|..+...       +...-.++.+.+..+++.++..    .+-.+++++||+.+....+....+.. -..
T Consensus       152 ~~~~~v~~~~ggrp~~e-------d~~~p~~VD~~g~knlvdA~~~----aGvk~~vlv~si~~~~~~~~~~~~~~-~~~  219 (411)
T KOG1203|consen  152 KGVVIVIKGAGGRPEEE-------DIVTPEKVDYEGTKNLVDACKK----AGVKRVVLVGSIGGTKFNQPPNILLL-NGL  219 (411)
T ss_pred             ccceeEEecccCCCCcc-------cCCCcceecHHHHHHHHHHHHH----hCCceEEEEEeecCcccCCCchhhhh-hhh
Confidence             3556777776543321       1222334556777777887733    46679999999988766655444442 111


Q ss_pred             HHHHHHHHHHHhccCCeEEEEEecCCccCC
Q 024338          183 VIGLTKTVAKEYASRNINVNAIAPGFIASD  212 (269)
Q Consensus       183 l~~~~~~la~e~~~~gi~v~~v~pG~v~t~  212 (269)
                      ....=+....++...|+.-..|.||-...+
T Consensus       220 ~~~~k~~~e~~~~~Sgl~ytiIR~g~~~~~  249 (411)
T KOG1203|consen  220 VLKAKLKAEKFLQDSGLPYTIIRPGGLEQD  249 (411)
T ss_pred             hhHHHHhHHHHHHhcCCCcEEEeccccccC
Confidence            111112334456678999999999977654

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=98.62  E-value=7.2e-07  Score=79.75  Aligned_cols=176  Identities=18%  Similarity=0.216  Sum_probs=112.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcC--C-cEEEEecCCH---HHHH--------HHHHHHHHc----CCcEEEEEcc
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAG--C-KVLVNYARSS---KEAE--------EVCKEIEAS----GGQALTFGGD   84 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G--~-~v~i~~~r~~---~~~~--------~~~~~l~~~----~~~~~~~~~D   84 (269)
                      -++||+++||||+|++|+-+...+++--  . ++.++ -|.+   +..+        ++.+.+++.    -.++..+.+|
T Consensus         9 f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlL-iR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GD   87 (467)
T KOG1221|consen    9 FYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLL-IRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGD   87 (467)
T ss_pred             HhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEE-EecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccc
Confidence            4689999999999999999999998753  2 33333 3322   1122        233334333    2467788889


Q ss_pred             CCCHHHHHH--HHHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEc
Q 024338           85 VSKEADVES--MIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIA  162 (269)
Q Consensus        85 ls~~~~~~~--~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~is  162 (269)
                      +++++---+  -.+.+.   ..+|++||+|+....       .+.++....+|.+|+..+++.+....   +-..++++|
T Consensus        88 i~~~~LGis~~D~~~l~---~eV~ivih~AAtvrF-------de~l~~al~iNt~Gt~~~l~lak~~~---~l~~~vhVS  154 (467)
T KOG1221|consen   88 ISEPDLGISESDLRTLA---DEVNIVIHSAATVRF-------DEPLDVALGINTRGTRNVLQLAKEMV---KLKALVHVS  154 (467)
T ss_pred             ccCcccCCChHHHHHHH---hcCCEEEEeeeeecc-------chhhhhhhhhhhHhHHHHHHHHHHhh---hhheEEEee
Confidence            885442111  111111   279999999997543       35788899999999999988776643   345789998


Q ss_pred             CCcccc--------CCC--------------------------------CChhhHHhHHHHHHHHHHHHHHhccCCeEEE
Q 024338          163 SVVGLV--------GNI--------------------------------GQANYSAAKAGVIGLTKTVAKEYASRNINVN  202 (269)
Q Consensus       163 S~~~~~--------~~~--------------------------------~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~  202 (269)
                      ...+..        +++                                ..-.|.-+|+..+.+..    +. ..++.+.
T Consensus       155 TAy~n~~~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~----~~-~~~lPiv  229 (467)
T KOG1221|consen  155 TAYSNCNVGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQ----KE-AENLPLV  229 (467)
T ss_pred             hhheecccccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHH----hh-ccCCCeE
Confidence            876641        111                                11237777774444433    22 2368899


Q ss_pred             EEecCCccCCccccc
Q 024338          203 AIAPGFIASDMTAKL  217 (269)
Q Consensus       203 ~v~pG~v~t~~~~~~  217 (269)
                      .+.|..|-+...++.
T Consensus       230 IiRPsiI~st~~EP~  244 (467)
T KOG1221|consen  230 IIRPSIITSTYKEPF  244 (467)
T ss_pred             EEcCCceeccccCCC
Confidence            999998877655444

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=98.62  E-value=2e-06  Score=69.14  Aligned_cols=187  Identities=13%  Similarity=0.125  Sum_probs=116.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC--cEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGC--KVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~--~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      |++||||++|-+|.++.+.+.+.|.  .-.++.+.                     -.+|+++..+.++++++.     +
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s---------------------kd~DLt~~a~t~~lF~~e-----k   55 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS---------------------KDADLTNLADTRALFESE-----K   55 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc---------------------ccccccchHHHHHHHhcc-----C
Confidence            6899999999999999999999886  32332111                     246999999999999864     7


Q ss_pred             ccEEEEccCCCCC-CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccc-----c----------
Q 024338          105 VDILINNAGITRD-TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGL-----V----------  168 (269)
Q Consensus       105 id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~-----~----------  168 (269)
                      +-+|||.|+...- -....-..+-++..+++|--    +++.+-.    .+..++++..|.+-+     .          
T Consensus        56 PthVIhlAAmVGGlf~N~~ynldF~r~Nl~indN----Vlhsa~e----~gv~K~vsclStCIfPdkt~yPIdEtmvh~g  127 (315)
T KOG1431|consen   56 PTHVIHLAAMVGGLFHNNTYNLDFIRKNLQINDN----VLHSAHE----HGVKKVVSCLSTCIFPDKTSYPIDETMVHNG  127 (315)
T ss_pred             CceeeehHhhhcchhhcCCCchHHHhhcceechh----HHHHHHH----hchhhhhhhcceeecCCCCCCCCCHHHhccC
Confidence            8899999875421 11112234555555444322    2222222    233345554443321     1          


Q ss_pred             -CCCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC------h----HHHHHHH----------h
Q 024338          169 -GNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG------E----DLEKKIL----------E  227 (269)
Q Consensus       169 -~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~------~----~~~~~~~----------~  227 (269)
                       +-|....|+.+|..+.-..+..+.++   |-...++.|--+..|.-+-..      +    .+++...          .
T Consensus       128 pphpsN~gYsyAKr~idv~n~aY~~qh---g~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGs  204 (315)
T KOG1431|consen  128 PPHPSNFGYSYAKRMIDVQNQAYRQQH---GRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGS  204 (315)
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHHh---CCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecC
Confidence             12345579999998877777777766   446677777766666432111      1    2222222          2


Q ss_pred             cCCCCCCCCHHHHHHHHHHhccC
Q 024338          228 KIPLGRYGQPEEVAGLVEFLALN  250 (269)
Q Consensus       228 ~~~~~~~~~~~~~a~~~~~l~~~  250 (269)
                      +.|++.+...+|.|++.+|++..
T Consensus       205 G~PlRqFiys~DLA~l~i~vlr~  227 (315)
T KOG1431|consen  205 GSPLRQFIYSDDLADLFIWVLRE  227 (315)
T ss_pred             CChHHHHhhHhHHHHHHHHHHHh
Confidence            34667778899999999999854

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.58  E-value=1.9e-07  Score=82.68  Aligned_cols=84  Identities=21%  Similarity=0.202  Sum_probs=62.4

Q ss_pred             CCCCCCEEEEeCC---------------CCc-hHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccC
Q 024338           22 QNVEAPVAVVTGA---------------SRG-IGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDV   85 (269)
Q Consensus        22 ~~~~~k~vlItGa---------------s~g-iG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl   85 (269)
                      .+++||++|||||               |+| +|.++|+.|+.+|++|+++.++....          ...  ....+|+
T Consensus       181 ~~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~----------~~~--~~~~~~v  248 (390)
T TIGR00521       181 EDLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL----------TPP--GVKSIKV  248 (390)
T ss_pred             cccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC----------CCC--CcEEEEe
Confidence            4589999999999               666 99999999999999998854433211          111  1256799


Q ss_pred             CCHHHH-HHHHHHHHHhcCCccEEEEccCCCCCCcc
Q 024338           86 SKEADV-ESMIKTAVDAWGTVDILINNAGITRDTLL  120 (269)
Q Consensus        86 s~~~~~-~~~~~~~~~~~~~id~li~~ag~~~~~~~  120 (269)
                      ++.+++ +++++++   ++++|++|+|||+....+.
T Consensus       249 ~~~~~~~~~~~~~~---~~~~D~~i~~Aavsd~~~~  281 (390)
T TIGR00521       249 STAEEMLEAALNEL---AKDFDIFISAAAVADFKPK  281 (390)
T ss_pred             ccHHHHHHHHHHhh---cccCCEEEEcccccccccc
Confidence            999988 5555443   4689999999998766543

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.50  E-value=6.8e-07  Score=73.82  Aligned_cols=100  Identities=17%  Similarity=0.163  Sum_probs=67.2

Q ss_pred             CEEEEeCCCCc-hHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Q 024338           27 PVAVVTGASRG-IGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTV  105 (269)
Q Consensus        27 k~vlItGas~g-iG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i  105 (269)
                      .+-.||..|+| +|.++|++|+++|++|+++ .++... .   .   .....+.++.+  .+   .++..+.+.+.++.+
T Consensus        16 ~VR~itN~SSG~iG~aLA~~L~~~G~~V~li-~r~~~~-~---~---~~~~~v~~i~v--~s---~~~m~~~l~~~~~~~   82 (229)
T PRK06732         16 SVRGITNHSTGQLGKIIAETFLAAGHEVTLV-TTKTAV-K---P---EPHPNLSIIEI--EN---VDDLLETLEPLVKDH   82 (229)
T ss_pred             CceeecCccchHHHHHHHHHHHhCCCEEEEE-ECcccc-c---C---CCCCCeEEEEE--ec---HHHHHHHHHHHhcCC
Confidence            46678877765 9999999999999999986 443211 0   0   00124445543  22   233333444445679


Q ss_pred             cEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHH
Q 024338          106 DILINNAGITRDTLLMRMKKSQWQDVIDLNLTGV  139 (269)
Q Consensus       106 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~  139 (269)
                      |++|||||.....+....+.+++.+.+++|.+..
T Consensus        83 DivIh~AAvsd~~~~~~~~~~~~~~~~~v~~~~~  116 (229)
T PRK06732         83 DVLIHSMAVSDYTPVYMTDLEEVSASDNLNEFLT  116 (229)
T ss_pred             CEEEeCCccCCceehhhhhhhhhhhhhhhhhhhc
Confidence            9999999998766666778888999988887753

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=98.44  E-value=1.6e-05  Score=62.00  Aligned_cols=196  Identities=15%  Similarity=0.086  Sum_probs=121.4

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCccE
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDI  107 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~  107 (269)
                      .+.|+||||..|..++++..++|+.|..+ .|++.+....        ..+.+++.|+.|.+++.+.+.       +.|.
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAi-vRn~~K~~~~--------~~~~i~q~Difd~~~~a~~l~-------g~Da   65 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAI-VRNASKLAAR--------QGVTILQKDIFDLTSLASDLA-------GHDA   65 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEE-EeChHhcccc--------ccceeecccccChhhhHhhhc-------CCce
Confidence            47899999999999999999999999994 7888766433        245578999999998876665       8999


Q ss_pred             EEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCC--------C--hhhH
Q 024338          108 LINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIG--------Q--ANYS  177 (269)
Q Consensus       108 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~--------~--~~Y~  177 (269)
                      ||..-|......      +  +...        ...+.+...++..+..|++.++...+..-.++        .  .-|.
T Consensus        66 VIsA~~~~~~~~------~--~~~~--------k~~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~ey~~  129 (211)
T COG2910          66 VISAFGAGASDN------D--ELHS--------KSIEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYKP  129 (211)
T ss_pred             EEEeccCCCCCh------h--HHHH--------HHHHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecCCCCchhHHH
Confidence            999887653221      1  1111        11445555555557889999999887643322        1  2244


Q ss_pred             HhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChH-HH-HHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCC
Q 024338          178 AAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGED-LE-KKILEKIPLGRYGQPEEVAGLVEFLALNPAAGY  255 (269)
Q Consensus       178 ~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~  255 (269)
                      .+++. .-+.+.|.   ...++.-+-++|.....|.. +.... .. +.+.....-.+.-+-+|-|-+++.-...+..  
T Consensus       130 ~A~~~-ae~L~~Lr---~~~~l~WTfvSPaa~f~PGe-rTg~yrlggD~ll~n~~G~SrIS~aDYAiA~lDe~E~~~h--  202 (211)
T COG2910         130 EALAQ-AEFLDSLR---AEKSLDWTFVSPAAFFEPGE-RTGNYRLGGDQLLVNAKGESRISYADYAIAVLDELEKPQH--  202 (211)
T ss_pred             HHHHH-HHHHHHHh---hccCcceEEeCcHHhcCCcc-ccCceEeccceEEEcCCCceeeeHHHHHHHHHHHHhcccc--
Confidence            44442 22333343   34468888999987777632 11110 00 0000111111334678888888877755432  


Q ss_pred             ccccEEEe
Q 024338          256 ITGQVLTI  263 (269)
Q Consensus       256 ~~G~~i~~  263 (269)
                       .-|.|.+
T Consensus       203 -~rqRftv  209 (211)
T COG2910         203 -IRQRFTV  209 (211)
T ss_pred             -cceeeee
Confidence             3455554

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=98.43  E-value=6.6e-07  Score=72.70  Aligned_cols=220  Identities=18%  Similarity=0.146  Sum_probs=134.4

Q ss_pred             CCCCC-CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHH-----cCCcEEEEEccCCCHHHHHHHH
Q 024338           22 QNVEA-PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEA-----SGGQALTFGGDVSKEADVESMI   95 (269)
Q Consensus        22 ~~~~~-k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~-----~~~~~~~~~~Dls~~~~~~~~~   95 (269)
                      ..++. |++||||-+|-=|..++..|+.+|++|..+++|+..-...-.+.+-.     .+.....+.+|++|...+.+++
T Consensus        23 ~~~r~rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I  102 (376)
T KOG1372|consen   23 GAFRPRKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLI  102 (376)
T ss_pred             cCcccceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHH
Confidence            34444 69999999999999999999999999998777766433333334322     2556788999999999999999


Q ss_pred             HHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCC--cc-------
Q 024338           96 KTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASV--VG-------  166 (269)
Q Consensus        96 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~--~~-------  166 (269)
                      +.+     +++-+.|.|+.++..-    +.+--+-.-++...|++.++.++...-..++ =++---|+.  .|       
T Consensus       103 ~~i-----kPtEiYnLaAQSHVkv----SFdlpeYTAeVdavGtLRlLdAi~~c~l~~~-VrfYQAstSElyGkv~e~PQ  172 (376)
T KOG1372|consen  103 STI-----KPTEVYNLAAQSHVKV----SFDLPEYTAEVDAVGTLRLLDAIRACRLTEK-VRFYQASTSELYGKVQEIPQ  172 (376)
T ss_pred             hcc-----CchhhhhhhhhcceEE----EeecccceeeccchhhhhHHHHHHhcCcccc-eeEEecccHhhcccccCCCc
Confidence            987     7788888888765532    1122234556667788877776654222221 222222222  12       


Q ss_pred             --ccCCCCChhhHHhHHHHHHHHHHHHHH---hccCCeEEEEEecCCccCCcccccChHHHHHH---HhcC------CCC
Q 024338          167 --LVGNIGQANYSAAKAGVIGLTKTVAKE---YASRNINVNAIAPGFIASDMTAKLGEDLEKKI---LEKI------PLG  232 (269)
Q Consensus       167 --~~~~~~~~~Y~~sK~al~~~~~~la~e---~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~---~~~~------~~~  232 (269)
                        ..|.-+.++|+++|.+-..++-..+..   ++-.||-+|.=+|--=.+-.++..........   .+.+      ..+
T Consensus       173 sE~TPFyPRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~R  252 (376)
T KOG1372|consen  173 SETTPFYPRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALR  252 (376)
T ss_pred             ccCCCCCCCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhhc
Confidence              123446789999998754444333333   34457777777764333333332222111110   1111      223


Q ss_pred             CCCCHHHHHHHHHHhccCC
Q 024338          233 RYGQPEEVAGLVEFLALNP  251 (269)
Q Consensus       233 ~~~~~~~~a~~~~~l~~~~  251 (269)
                      .+..+.|-.++++.+++.+
T Consensus       253 DWGhA~dYVEAMW~mLQ~d  271 (376)
T KOG1372|consen  253 DWGHAGDYVEAMWLMLQQD  271 (376)
T ss_pred             ccchhHHHHHHHHHHHhcC
Confidence            4567888888888777544

>PRK09620 hypothetical protein; Provisional

Probab=98.26  E-value=1.1e-06  Score=72.40  Aligned_cols=85  Identities=20%  Similarity=0.263  Sum_probs=52.1

Q ss_pred             CCCCEEEEeCCC----------------CchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCC
Q 024338           24 VEAPVAVVTGAS----------------RGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK   87 (269)
Q Consensus        24 ~~~k~vlItGas----------------~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~   87 (269)
                      |+||.||||+|.                |.+|.++|++|+++|+.|+++.+.......    .+. .......+..    
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~----~~~-~~~~~~~V~s----   71 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPN----DIN-NQLELHPFEG----   71 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCc----ccC-CceeEEEEec----
Confidence            579999999886                999999999999999999886432211000    000 0112223333    


Q ss_pred             HHHHHHHHHHHHHhcCCccEEEEccCCCCCC
Q 024338           88 EADVESMIKTAVDAWGTVDILINNAGITRDT  118 (269)
Q Consensus        88 ~~~~~~~~~~~~~~~~~id~li~~ag~~~~~  118 (269)
                      ..++...+.++.+. .++|++||+|+..+..
T Consensus        72 ~~d~~~~l~~~~~~-~~~D~VIH~AAvsD~~  101 (229)
T PRK09620         72 IIDLQDKMKSIITH-EKVDAVIMAAAGSDWV  101 (229)
T ss_pred             HHHHHHHHHHHhcc-cCCCEEEECcccccee
Confidence            22222333333321 2689999999986554

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=98.25  E-value=5.5e-06  Score=64.10  Aligned_cols=162  Identities=17%  Similarity=0.101  Sum_probs=101.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcC--CcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAG--CKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAV   99 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G--~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~   99 (269)
                      ..++++.++|.||+|-.|..+.+++++.+  .+|.++.+|... ..+       .+..+.....|++..++.....    
T Consensus        14 f~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~-d~a-------t~k~v~q~~vDf~Kl~~~a~~~----   81 (238)
T KOG4039|consen   14 FRMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELP-DPA-------TDKVVAQVEVDFSKLSQLATNE----   81 (238)
T ss_pred             HhhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCC-Ccc-------ccceeeeEEechHHHHHHHhhh----
Confidence            56789999999999999999999999998  556665454221 111       1334556677887766544443    


Q ss_pred             HhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHh
Q 024338          100 DAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAA  179 (269)
Q Consensus       100 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  179 (269)
                         ..+|+++|+-|...-..       ..+..+.+.-.-.+.+++..    .+++-..++.+||..+.-.  ....|--.
T Consensus        82 ---qg~dV~FcaLgTTRgka-------GadgfykvDhDyvl~~A~~A----Ke~Gck~fvLvSS~GAd~s--SrFlY~k~  145 (238)
T KOG4039|consen   82 ---QGPDVLFCALGTTRGKA-------GADGFYKVDHDYVLQLAQAA----KEKGCKTFVLVSSAGADPS--SRFLYMKM  145 (238)
T ss_pred             ---cCCceEEEeeccccccc-------ccCceEeechHHHHHHHHHH----HhCCCeEEEEEeccCCCcc--cceeeeec
Confidence               38999999998643210       11111222222222233333    2355678999999876644  34567777


Q ss_pred             HHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc
Q 024338          180 KAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL  217 (269)
Q Consensus       180 K~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~  217 (269)
                      |.-++.=+..|-.      =++..+.||++.....+.-
T Consensus       146 KGEvE~~v~eL~F------~~~~i~RPG~ll~~R~esr  177 (238)
T KOG4039|consen  146 KGEVERDVIELDF------KHIIILRPGPLLGERTESR  177 (238)
T ss_pred             cchhhhhhhhccc------cEEEEecCcceeccccccc
Confidence            7766554444332      2788899999987655433

>PLN00106 malate dehydrogenase

Probab=98.24  E-value=8.6e-06  Score=70.52  Aligned_cols=150  Identities=17%  Similarity=0.162  Sum_probs=91.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC--cEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGC--KVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~--~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      .++.|.|||++|.+|..++..++.++.  ++++ .+.++  .+...-++.......  ...|+++.+++.+.+.      
T Consensus        17 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L-~Di~~--~~g~a~Dl~~~~~~~--~i~~~~~~~d~~~~l~------   85 (323)
T PLN00106         17 PGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHL-YDIAN--TPGVAADVSHINTPA--QVRGFLGDDQLGDALK------   85 (323)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEE-EecCC--CCeeEchhhhCCcCc--eEEEEeCCCCHHHHcC------
Confidence            347899999999999999999997763  4544 56655  211122332222221  2234444444444443      


Q ss_pred             CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccc-------------cC
Q 024338          103 GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGL-------------VG  169 (269)
Q Consensus       103 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~-------------~~  169 (269)
                       ..|++|+.||....      +...+.+.+..|+.....+    .+.+.+.....+++++|-...             .+
T Consensus        86 -~aDiVVitAG~~~~------~g~~R~dll~~N~~i~~~i----~~~i~~~~p~aivivvSNPvD~~~~i~t~~~~~~s~  154 (323)
T PLN00106         86 -GADLVIIPAGVPRK------PGMTRDDLFNINAGIVKTL----CEAVAKHCPNALVNIISNPVNSTVPIAAEVLKKAGV  154 (323)
T ss_pred             -CCCEEEEeCCCCCC------CCCCHHHHHHHHHHHHHHH----HHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCC
Confidence             89999999997533      1234677888888874444    444444444455555554332             23


Q ss_pred             CCCChhhHHhHHHHHHHHHHHHHHhcc
Q 024338          170 NIGQANYSAAKAGVIGLTKTVAKEYAS  196 (269)
Q Consensus       170 ~~~~~~Y~~sK~al~~~~~~la~e~~~  196 (269)
                      .|..-.|+.++.-..-|...++.++.-
T Consensus       155 ~p~~~viG~~~LDs~Rl~~~lA~~lgv  181 (323)
T PLN00106        155 YDPKKLFGVTTLDVVRANTFVAEKKGL  181 (323)
T ss_pred             CCcceEEEEecchHHHHHHHHHHHhCC
Confidence            566678888876666677777777643

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.19  E-value=1.1e-05  Score=73.46  Aligned_cols=79  Identities=23%  Similarity=0.347  Sum_probs=58.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      ++++|+++|+|+++ +|.++|+.|+++|++|.+......+..++..+++...+  +.++.+|..+            +..
T Consensus         2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~--~~~~~~~~~~------------~~~   66 (450)
T PRK14106          2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELG--IELVLGEYPE------------EFL   66 (450)
T ss_pred             CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC--CEEEeCCcch------------hHh
Confidence            67899999999887 99999999999999999853333344555555554433  4567778776            112


Q ss_pred             CCccEEEEccCCCC
Q 024338          103 GTVDILINNAGITR  116 (269)
Q Consensus       103 ~~id~li~~ag~~~  116 (269)
                      +.+|+||+++|...
T Consensus        67 ~~~d~vv~~~g~~~   80 (450)
T PRK14106         67 EGVDLVVVSPGVPL   80 (450)
T ss_pred             hcCCEEEECCCCCC
Confidence            47899999999753

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.18  E-value=1.1e-05  Score=71.00  Aligned_cols=77  Identities=29%  Similarity=0.426  Sum_probs=65.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcC-CcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAG-CKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTV  105 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G-~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i  105 (269)
                      +.+||.|+ |++|+.+|+.|+++| .+|.+ .+|+.++..++.+..   ..++...++|+.|.+.+.++++       +.
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~i-AdRs~~~~~~i~~~~---~~~v~~~~vD~~d~~al~~li~-------~~   69 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTI-ADRSKEKCARIAELI---GGKVEALQVDAADVDALVALIK-------DF   69 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEE-EeCCHHHHHHHHhhc---cccceeEEecccChHHHHHHHh-------cC
Confidence            56899999 999999999999999 77777 699988888776654   3489999999999999998888       44


Q ss_pred             cEEEEccCCC
Q 024338          106 DILINNAGIT  115 (269)
Q Consensus       106 d~li~~ag~~  115 (269)
                      |+|||++...
T Consensus        70 d~VIn~~p~~   79 (389)
T COG1748          70 DLVINAAPPF   79 (389)
T ss_pred             CEEEEeCCch
Confidence            9999999643

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.18  E-value=1.5e-05  Score=69.21  Aligned_cols=76  Identities=26%  Similarity=0.391  Sum_probs=54.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHc-CCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKA-GCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~-G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      .++++|+++||||+|.||..+|++|+++ |..-+++..|+.+++.++..++..         .|+.   ++.       +
T Consensus       151 ~~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~---------~~i~---~l~-------~  211 (340)
T PRK14982        151 IDLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGG---------GKIL---SLE-------E  211 (340)
T ss_pred             cCcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhcc---------ccHH---hHH-------H
Confidence            4789999999999999999999999865 654344468888888777665521         2222   222       2


Q ss_pred             hcCCccEEEEccCCCC
Q 024338          101 AWGTVDILINNAGITR  116 (269)
Q Consensus       101 ~~~~id~li~~ag~~~  116 (269)
                      .+...|++|++++...
T Consensus       212 ~l~~aDiVv~~ts~~~  227 (340)
T PRK14982        212 ALPEADIVVWVASMPK  227 (340)
T ss_pred             HHccCCEEEECCcCCc
Confidence            3347899999998643

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.15  E-value=1.9e-05  Score=59.71  Aligned_cols=79  Identities=27%  Similarity=0.369  Sum_probs=58.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      .++++|+++|.|+ ||.|++++..|++.|+.-+.++.|+.++++++.+++.  +..+.++..  .+   +.+.+.     
T Consensus         8 ~~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~--~~~~~~~~~--~~---~~~~~~-----   74 (135)
T PF01488_consen    8 GDLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFG--GVNIEAIPL--ED---LEEALQ-----   74 (135)
T ss_dssp             STGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHT--GCSEEEEEG--GG---HCHHHH-----
T ss_pred             CCcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcC--ccccceeeH--HH---HHHHHh-----
Confidence            4789999999998 8999999999999999944447999999999988882  233444433  22   223333     


Q ss_pred             cCCccEEEEccCCC
Q 024338          102 WGTVDILINNAGIT  115 (269)
Q Consensus       102 ~~~id~li~~ag~~  115 (269)
                        ..|++|++.+..
T Consensus        75 --~~DivI~aT~~~   86 (135)
T PF01488_consen   75 --EADIVINATPSG   86 (135)
T ss_dssp             --TESEEEE-SSTT
T ss_pred             --hCCeEEEecCCC
Confidence              789999998754

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.14  E-value=1.3e-05  Score=71.52  Aligned_cols=76  Identities=28%  Similarity=0.440  Sum_probs=59.1

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCC--cEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCcc
Q 024338           29 AVVTGASRGIGRAVATSLGKAGC--KVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVD  106 (269)
Q Consensus        29 vlItGas~giG~~~a~~l~~~G~--~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id  106 (269)
                      |+|.|+ |.+|+.+++.|++++-  ++++ .+|+.++++++.+++  ...++..+++|+.|.+++.++++       ..|
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~v-a~r~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~l~~~~~-------~~d   69 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTV-ADRNPEKAERLAEKL--LGDRVEAVQVDVNDPESLAELLR-------GCD   69 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEE-EESSHHHHHHHHT----TTTTEEEEE--TTTHHHHHHHHT-------TSS
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEE-EECCHHHHHHHHhhc--cccceeEEEEecCCHHHHHHHHh-------cCC
Confidence            689999 9999999999999985  5555 799999988887765  45789999999999999888877       669


Q ss_pred             EEEEccCCC
Q 024338          107 ILINNAGIT  115 (269)
Q Consensus       107 ~li~~ag~~  115 (269)
                      +|||++|..
T Consensus        70 vVin~~gp~   78 (386)
T PF03435_consen   70 VVINCAGPF   78 (386)
T ss_dssp             EEEE-SSGG
T ss_pred             EEEECCccc
Confidence            999999843

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PTZ00325 malate dehydrogenase; Provisional

Probab=98.05  E-value=2.9e-05  Score=67.18  Aligned_cols=146  Identities=15%  Similarity=0.123  Sum_probs=88.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcC--CcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAG--CKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G--~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      +.+.+.|||++|.+|..++..++.++  .++++ .+++..  +...-++.....  .....+.+|..+..+.++      
T Consensus         7 ~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL-~Di~~~--~g~a~Dl~~~~~--~~~v~~~td~~~~~~~l~------   75 (321)
T PTZ00325          7 KMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSL-YDIVGA--PGVAADLSHIDT--PAKVTGYADGELWEKALR------   75 (321)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEE-EecCCC--cccccchhhcCc--CceEEEecCCCchHHHhC------
Confidence            45689999999999999999999665  44555 455322  211223332222  223345555444334443      


Q ss_pred             CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcc-------------ccC
Q 024338          103 GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVG-------------LVG  169 (269)
Q Consensus       103 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~-------------~~~  169 (269)
                       +.|+||+++|....      +.+.+.+.++.|+..    ++.+.+.|.+....++|.++|...             ..+
T Consensus        76 -gaDvVVitaG~~~~------~~~tR~dll~~N~~i----~~~i~~~i~~~~~~~iviv~SNPvdv~~~~~~~~~~~~sg  144 (321)
T PTZ00325         76 -GADLVLICAGVPRK------PGMTRDDLFNTNAPI----VRDLVAAVASSAPKAIVGIVSNPVNSTVPIAAETLKKAGV  144 (321)
T ss_pred             -CCCEEEECCCCCCC------CCCCHHHHHHHHHHH----HHHHHHHHHHHCCCeEEEEecCcHHHHHHHHHhhhhhccC
Confidence             79999999997432      123456778888887    555666666666678888877532             133


Q ss_pred             CCCChhhHHhHHHHHH--HHHHHHHHh
Q 024338          170 NIGQANYSAAKAGVIG--LTKTVAKEY  194 (269)
Q Consensus       170 ~~~~~~Y~~sK~al~~--~~~~la~e~  194 (269)
                      .|....|+.+ . |+.  |...++..+
T Consensus       145 ~p~~~viG~g-~-LDs~R~r~~la~~l  169 (321)
T PTZ00325        145 YDPRKLFGVT-T-LDVVRARKFVAEAL  169 (321)
T ss_pred             CChhheeech-h-HHHHHHHHHHHHHh
Confidence            4566677776 2 432  344455444

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=97.83  E-value=8.1e-05  Score=63.83  Aligned_cols=79  Identities=23%  Similarity=0.334  Sum_probs=66.7

Q ss_pred             EEEEeCCCCchHHHHHHHHHH----cCCcEEEEecCCHHHHHHHHHHHHHcC----CcEEEEEccCCCHHHHHHHHHHHH
Q 024338           28 VAVVTGASRGIGRAVATSLGK----AGCKVLVNYARSSKEAEEVCKEIEASG----GQALTFGGDVSKEADVESMIKTAV   99 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~----~G~~v~i~~~r~~~~~~~~~~~l~~~~----~~~~~~~~Dls~~~~~~~~~~~~~   99 (269)
                      -++|-||||.-|..++.++..    .|....+ .+|+++++++.++++.+..    ....++.||.+|++++.+.+.   
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slav-AGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak---   82 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAV-AGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAK---   82 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEE-ecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHh---
Confidence            478999999999999999998    6777666 7999999999999887654    223388999999999999888   


Q ss_pred             HhcCCccEEEEccCC
Q 024338          100 DAWGTVDILINNAGI  114 (269)
Q Consensus       100 ~~~~~id~li~~ag~  114 (269)
                          ...+++||+|-
T Consensus        83 ----~~~vivN~vGP   93 (423)
T KOG2733|consen   83 ----QARVIVNCVGP   93 (423)
T ss_pred             ----hhEEEEecccc
Confidence                45789999984

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.81  E-value=6.6e-05  Score=59.80  Aligned_cols=81  Identities=19%  Similarity=0.216  Sum_probs=49.0

Q ss_pred             CCCCEEEEeCC----------------CCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCC
Q 024338           24 VEAPVAVVTGA----------------SRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK   87 (269)
Q Consensus        24 ~~~k~vlItGa----------------s~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~   87 (269)
                      |+||.||||+|                ||..|.++|+.++.+|++|+++.+...-..          ...+..+  ++.+
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~~~~----------p~~~~~i--~v~s   68 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSSLPP----------PPGVKVI--RVES   68 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS--------------TTEEEE--E-SS
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCccccc----------cccceEE--Eecc
Confidence            57899999987                578999999999999999998655432111          1234333  4555


Q ss_pred             HHHHHHHHHHHHHhcCCccEEEEccCCCCCCc
Q 024338           88 EADVESMIKTAVDAWGTVDILINNAGITRDTL  119 (269)
Q Consensus        88 ~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~  119 (269)
                      .+++.+.+.+.   ++.-|++|++|+..+..+
T Consensus        69 a~em~~~~~~~---~~~~Di~I~aAAVsDf~p   97 (185)
T PF04127_consen   69 AEEMLEAVKEL---LPSADIIIMAAAVSDFRP   97 (185)
T ss_dssp             HHHHHHHHHHH---GGGGSEEEE-SB--SEEE
T ss_pred             hhhhhhhhccc---cCcceeEEEecchhheee
Confidence            55555555544   445699999999876543

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=97.72  E-value=0.0005  Score=58.99  Aligned_cols=79  Identities=23%  Similarity=0.313  Sum_probs=52.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      +|++++|+|+++++|.++++.+...|++++++ .++.+..+.+ .++   +.+   ..+|..+.+..+.+.+...+  .+
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~-~~~~~~~~~~-~~~---g~~---~~~~~~~~~~~~~~~~~~~~--~~  213 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGARVIAT-ASSAEGAELV-RQA---GAD---AVFNYRAEDLADRILAATAG--QG  213 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHH-HHc---CCC---EEEeCCCcCHHHHHHHHcCC--Cc
Confidence            58999999999999999999999999998874 6666554433 222   322   12344444444443322211  36


Q ss_pred             ccEEEEccC
Q 024338          105 VDILINNAG  113 (269)
Q Consensus       105 id~li~~ag  113 (269)
                      +|.+++++|
T Consensus       214 ~d~vi~~~~  222 (325)
T cd08253         214 VDVIIEVLA  222 (325)
T ss_pred             eEEEEECCc
Confidence            999999986

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=97.72  E-value=9.4e-05  Score=64.37  Aligned_cols=116  Identities=19%  Similarity=0.238  Sum_probs=66.1

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcC-------CcEEEEecCCHH--HHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHH
Q 024338           28 VAVVTGASRGIGRAVATSLGKAG-------CKVLVNYARSSK--EAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTA   98 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G-------~~v~i~~~r~~~--~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~   98 (269)
                      .++||||+|.+|..++..|+..+       .+++++ ++++.  .++...-++...   ......|++...+..+.+   
T Consensus         4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~-D~~~~~~~~~g~~~Dl~d~---~~~~~~~~~~~~~~~~~l---   76 (325)
T cd01336           4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLL-DIPPALKALEGVVMELQDC---AFPLLKSVVATTDPEEAF---   76 (325)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEE-EcCCccccccceeeehhhc---cccccCCceecCCHHHHh---
Confidence            58999999999999999999855       467664 55432  122111111100   001112333222222323   


Q ss_pred             HHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC--CCCeEEEEcCC
Q 024338           99 VDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKK--KKGRIINIASV  164 (269)
Q Consensus        99 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~--~~~~iv~isS~  164 (269)
                          .+.|+|||+||.....   ..+   -.+.++.|+.-    .+.+.+.+.+.  +++.+|++|..
T Consensus        77 ----~~aDiVI~tAG~~~~~---~~~---R~~l~~~N~~i----~~~i~~~i~~~~~~~~iiivvsNP  130 (325)
T cd01336          77 ----KDVDVAILVGAMPRKE---GME---RKDLLKANVKI----FKEQGEALDKYAKKNVKVLVVGNP  130 (325)
T ss_pred             ----CCCCEEEEeCCcCCCC---CCC---HHHHHHHHHHH----HHHHHHHHHHhCCCCeEEEEecCc
Confidence                3799999999975431   122   25566677664    55555555444  46777877763

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=97.67  E-value=0.00071  Score=72.73  Aligned_cols=178  Identities=16%  Similarity=0.163  Sum_probs=114.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      +.++.++|++..++++.+++..|.++|+.|+++ . ..+...   .........+..+...--|..++..+++.+....+
T Consensus      1753 ~~~~~~~v~~d~~~~~~~L~~~L~~~G~~v~~~-~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1827 (2582)
T TIGR02813      1753 QSGANALVIDDDGHNAGVLAEKLIAAGWQVAVV-R-SPWVVS---HSASPLASAIASVTLGTIDDTSIEAVIKDIEEKTA 1827 (2582)
T ss_pred             ccCceeEEEcCCcchHHHHHHHHHhCCCeEEEe-e-cccccc---ccccccccccccccccccchHHHHHHHHhhhcccc
Confidence            447888888888999999999999999998874 2 221111   11000112233344555566778888888877778


Q ss_pred             CccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhh-------
Q 024338          104 TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANY-------  176 (269)
Q Consensus       104 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y-------  176 (269)
                      .++.+||..+...... ...+...+...-..-+...+.++|.+.+.+...+.+.++.++...|..+..+....       
T Consensus      1828 ~~~g~i~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~f~~ak~~~~~l~~~~~~~~~~vsr~~G~~g~~~~~~~~~~~~~~ 1906 (2582)
T TIGR02813      1828 QIDGFIHLQPQHKSVA-DKVDAIELPEAAKQSLMLAFLFAKLLNVKLATNARASFVTVSRIDGGFGYSNGDADSGTQQVK 1906 (2582)
T ss_pred             ccceEEEecccccccc-ccccccccchhhHHHHHHHHHHHHhhchhhccCCCeEEEEEEecCCccccCCccccccccccc
Confidence            8999999877542210 00000011111123344466777777666655566789999998877765432221       


Q ss_pred             -HHhHHHHHHHHHHHHHHhccCCeEEEEEecC
Q 024338          177 -SAAKAGVIGLTKTVAKEYASRNINVNAIAPG  207 (269)
Q Consensus       177 -~~sK~al~~~~~~la~e~~~~gi~v~~v~pG  207 (269)
                       ....+++.+|+|++++|+....+|...+.|.
T Consensus      1907 ~~~~~a~l~Gl~Ktl~~E~P~~~~r~vDl~~~ 1938 (2582)
T TIGR02813      1907 AELNQAALAGLTKTLNHEWNAVFCRALDLAPK 1938 (2582)
T ss_pred             cchhhhhHHHHHHhHHHHCCCCeEEEEeCCCC
Confidence             2357899999999999998877777777775

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.66  E-value=9.3e-05  Score=67.37  Aligned_cols=82  Identities=22%  Similarity=0.335  Sum_probs=53.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      |++++|+++|||+++ +|.++|+.|+++|+.|++. +++........+++...+.++  ...+..  ..+   .+     
T Consensus         1 ~~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~-d~~~~~~~~~~~~l~~~g~~~--~~~~~~--~~~---~~-----   66 (447)
T PRK02472          1 TEYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVN-DGKPFSENPEAQELLEEGIKV--ICGSHP--LEL---LD-----   66 (447)
T ss_pred             CCcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEE-cCCCccchhHHHHHHhcCCEE--EeCCCC--HHH---hc-----
Confidence            457899999999986 9999999999999999885 554433333344454433322  222111  111   11     


Q ss_pred             cCCccEEEEccCCCCCC
Q 024338          102 WGTVDILINNAGITRDT  118 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~  118 (269)
                       .++|.||+++|+....
T Consensus        67 -~~~d~vV~s~gi~~~~   82 (447)
T PRK02472         67 -EDFDLMVKNPGIPYTN   82 (447)
T ss_pred             -CcCCEEEECCCCCCCC
Confidence             1489999999986543

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=97.64  E-value=5.1e-05  Score=61.49  Aligned_cols=160  Identities=19%  Similarity=0.294  Sum_probs=98.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHH-cCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGK-AGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~-~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      +...+||||+-|-+|..+|+.|.. .|...+++.+-..+..     ..-+.+.   ++..|+-|..++++.+-.     .
T Consensus        43 ~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~-----~V~~~GP---yIy~DILD~K~L~eIVVn-----~  109 (366)
T KOG2774|consen   43 KAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPA-----NVTDVGP---YIYLDILDQKSLEEIVVN-----K  109 (366)
T ss_pred             CCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCch-----hhcccCC---chhhhhhccccHHHhhcc-----c
Confidence            457899999999999999999975 4776665433222211     1111122   466788887777765542     3


Q ss_pred             CccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccC-C------C-----
Q 024338          104 TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVG-N------I-----  171 (269)
Q Consensus       104 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~-~------~-----  171 (269)
                      +||-+||-.+....     ..+....-..++|+.|..++++....      ...-+|+-|..|..+ .      |     
T Consensus       110 RIdWL~HfSALLSA-----vGE~NVpLA~~VNI~GvHNil~vAa~------~kL~iFVPSTIGAFGPtSPRNPTPdltIQ  178 (366)
T KOG2774|consen  110 RIDWLVHFSALLSA-----VGETNVPLALQVNIRGVHNILQVAAK------HKLKVFVPSTIGAFGPTSPRNPTPDLTIQ  178 (366)
T ss_pred             ccceeeeHHHHHHH-----hcccCCceeeeecchhhhHHHHHHHH------cCeeEeecccccccCCCCCCCCCCCeeee
Confidence            89999998764221     12233445678999998887776643      223445544444332 1      1     


Q ss_pred             -CChhhHHhHHHHHHHHHHHHHHhccCCeEEEEE-ecCCccC
Q 024338          172 -GQANYSAAKAGVIGLTKTVAKEYASRNINVNAI-APGFIAS  211 (269)
Q Consensus       172 -~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v-~pG~v~t  211 (269)
                       +...|+.||.-.+.+-+.+...   +|+.+-++ .||.+..
T Consensus       179 RPRTIYGVSKVHAEL~GEy~~hr---Fg~dfr~~rfPg~is~  217 (366)
T KOG2774|consen  179 RPRTIYGVSKVHAELLGEYFNHR---FGVDFRSMRFPGIISA  217 (366)
T ss_pred             cCceeechhHHHHHHHHHHHHhh---cCccceecccCccccc
Confidence             4557999999877777655544   46655444 4665543

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.63  E-value=0.00049  Score=53.04  Aligned_cols=76  Identities=21%  Similarity=0.385  Sum_probs=54.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcC-CcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAG-CKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G-~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      ++++++++|+|+ |++|.++++.|.+.| ..+.+ ..|+.+..+++.+++....     +..+.++.++.          
T Consensus        16 ~~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v-~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~~~----------   78 (155)
T cd01065          16 ELKGKKVLILGA-GGAARAVAYALAELGAAKIVI-VNRTLEKAKALAERFGELG-----IAIAYLDLEEL----------   78 (155)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEE-EcCCHHHHHHHHHHHhhcc-----cceeecchhhc----------
Confidence            466899999998 899999999999997 56666 6888888877777664211     22333443322          


Q ss_pred             cCCccEEEEccCCC
Q 024338          102 WGTVDILINNAGIT  115 (269)
Q Consensus       102 ~~~id~li~~ag~~  115 (269)
                      ....|++|++....
T Consensus        79 ~~~~Dvvi~~~~~~   92 (155)
T cd01065          79 LAEADLIINTTPVG   92 (155)
T ss_pred             cccCCEEEeCcCCC
Confidence            24789999998754

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.51  E-value=0.00035  Score=59.51  Aligned_cols=77  Identities=26%  Similarity=0.405  Sum_probs=54.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcC-CcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAG-CKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G-~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      .++++|+++|+|+ ||+|++++..|++.| .+|.+ +.|+.++.+++.+++.... .+.   .++    +..       +
T Consensus       119 ~~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v-~~R~~~~a~~l~~~~~~~~-~~~---~~~----~~~-------~  181 (278)
T PRK00258        119 VDLKGKRILILGA-GGAARAVILPLLDLGVAEITI-VNRTVERAEELAKLFGALG-KAE---LDL----ELQ-------E  181 (278)
T ss_pred             CCCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEE-EeCCHHHHHHHHHHhhhcc-cee---ecc----cch-------h
Confidence            3678999999997 899999999999999 56666 6899988888887764321 111   111    011       1


Q ss_pred             hcCCccEEEEccCCC
Q 024338          101 AWGTVDILINNAGIT  115 (269)
Q Consensus       101 ~~~~id~li~~ag~~  115 (269)
                      .....|+|||+....
T Consensus       182 ~~~~~DivInaTp~g  196 (278)
T PRK00258        182 ELADFDLIINATSAG  196 (278)
T ss_pred             ccccCCEEEECCcCC
Confidence            123689999997643

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.49  E-value=0.0013  Score=55.86  Aligned_cols=76  Identities=30%  Similarity=0.462  Sum_probs=55.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      ..++|+++|+|+ ||+|++++..|++.|+.+.+ ..|+.++.+++.+.+...+ .......|     +.         ..
T Consensus       114 ~~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v-~~R~~~~~~~la~~~~~~~-~~~~~~~~-----~~---------~~  176 (270)
T TIGR00507       114 LRPNQRVLIIGA-GGAARAVALPLLKADCNVII-ANRTVSKAEELAERFQRYG-EIQAFSMD-----EL---------PL  176 (270)
T ss_pred             CccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHhhcC-ceEEechh-----hh---------cc
Confidence            356899999999 69999999999999998777 5888888888887775432 22222111     10         12


Q ss_pred             CCccEEEEccCCC
Q 024338          103 GTVDILINNAGIT  115 (269)
Q Consensus       103 ~~id~li~~ag~~  115 (269)
                      ...|+||++.+..
T Consensus       177 ~~~DivInatp~g  189 (270)
T TIGR00507       177 HRVDLIINATSAG  189 (270)
T ss_pred             cCccEEEECCCCC
Confidence            3689999998764

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.43  E-value=0.0043  Score=53.67  Aligned_cols=80  Identities=26%  Similarity=0.366  Sum_probs=55.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      ..+++++|+|+++++|.++++.+...|++++++ .++++..+.+ ..+   +..   ...|..+.+..+.+.+...+  .
T Consensus       165 ~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~-~~~~~~~~~~-~~~---~~~---~~~~~~~~~~~~~~~~~~~~--~  234 (342)
T cd08266         165 RPGETVLVHGAGSGVGSAAIQIAKLFGATVIAT-AGSEDKLERA-KEL---GAD---YVIDYRKEDFVREVRELTGK--R  234 (342)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHH-HHc---CCC---eEEecCChHHHHHHHHHhCC--C
Confidence            367899999999999999999999999998774 6666554433 222   222   22355665555554443322  3


Q ss_pred             CccEEEEccC
Q 024338          104 TVDILINNAG  113 (269)
Q Consensus       104 ~id~li~~ag  113 (269)
                      ++|++++++|
T Consensus       235 ~~d~~i~~~g  244 (342)
T cd08266         235 GVDVVVEHVG  244 (342)
T ss_pred             CCcEEEECCc
Confidence            6999999987

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.42  E-value=0.0042  Score=53.17  Aligned_cols=43  Identities=26%  Similarity=0.360  Sum_probs=36.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEE   66 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~   66 (269)
                      .+++||+++|+|. |++|+++++.|...|++|.+ ..|+++....
T Consensus       147 ~~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v-~~R~~~~~~~  189 (287)
T TIGR02853       147 FTIHGSNVMVLGF-GRTGMTIARTFSALGARVFV-GARSSADLAR  189 (287)
T ss_pred             CCCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEE-EeCCHHHHHH
Confidence            4788999999999 57999999999999999887 5777765443

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>cd00704 MDH Malate dehydrogenase

Probab=97.37  E-value=0.0013  Score=57.27  Aligned_cols=111  Identities=14%  Similarity=0.121  Sum_probs=66.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC-------cEEEEecCCH--HHHHHHHHHHHHcCCcEEEEEccCCCHHHHH----HH
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGC-------KVLVNYARSS--KEAEEVCKEIEASGGQALTFGGDVSKEADVE----SM   94 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~-------~v~i~~~r~~--~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~----~~   94 (269)
                      .+.||||+|.+|..++..|+..|.       .+++ .++++  +.+              .....|++|.....    ..
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L-~Di~~~~~~~--------------~g~~~Dl~d~~~~~~~~~~i   66 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHL-LDIPPAMKAL--------------EGVVMELQDCAFPLLKGVVI   66 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEE-EecCCccCcc--------------ceeeeehhhhcccccCCcEE
Confidence            479999999999999999998762       2444 56654  221              22344444431000    00


Q ss_pred             HHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC--CCCeEEEEcC
Q 024338           95 IKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKK--KKGRIINIAS  163 (269)
Q Consensus        95 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~--~~~~iv~isS  163 (269)
                      -....+.+...|++|+.||.....      .+.-.+.++.|+.-    .+.+.+.+.+.  +.+.++++|-
T Consensus        67 ~~~~~~~~~~aDiVVitAG~~~~~------g~tR~dll~~N~~i----~~~i~~~i~~~~~~~~iiivvsN  127 (323)
T cd00704          67 TTDPEEAFKDVDVAILVGAFPRKP------GMERADLLRKNAKI----FKEQGEALNKVAKPTVKVLVVGN  127 (323)
T ss_pred             ecChHHHhCCCCEEEEeCCCCCCc------CCcHHHHHHHhHHH----HHHHHHHHHHhCCCCeEEEEeCC
Confidence            012223345899999999975331      12344566666654    66666666554  5677777764

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.34  E-value=0.005  Score=54.66  Aligned_cols=76  Identities=21%  Similarity=0.299  Sum_probs=53.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      ++++.++|+|+ |.+|...++.+...|++|.+ +.++.++++.+...+   +..   +..+..+.+++.+.+       .
T Consensus       165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v-~d~~~~~~~~l~~~~---g~~---v~~~~~~~~~l~~~l-------~  229 (370)
T TIGR00518       165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTI-LDINIDRLRQLDAEF---GGR---IHTRYSNAYEIEDAV-------K  229 (370)
T ss_pred             CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEE-EECCHHHHHHHHHhc---Cce---eEeccCCHHHHHHHH-------c
Confidence            56778999988 79999999999999998777 577777665554433   221   223455555544443       3


Q ss_pred             CccEEEEccCC
Q 024338          104 TVDILINNAGI  114 (269)
Q Consensus       104 ~id~li~~ag~  114 (269)
                      ..|++|++++.
T Consensus       230 ~aDvVI~a~~~  240 (370)
T TIGR00518       230 RADLLIGAVLI  240 (370)
T ss_pred             cCCEEEEcccc
Confidence            68999999865

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK06849 hypothetical protein; Provisional

Probab=97.32  E-value=0.0026  Score=56.89  Aligned_cols=83  Identities=14%  Similarity=0.151  Sum_probs=54.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      +.|+|||||++..+|..+++.|.+.|++|+++ ..++.........+    .....+...-.+.+...+.+.++.++. +
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~-d~~~~~~~~~s~~~----d~~~~~p~p~~d~~~~~~~L~~i~~~~-~   76 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILA-DSLKYPLSRFSRAV----DGFYTIPSPRWDPDAYIQALLSIVQRE-N   76 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE-eCCchHHHHHHHhh----hheEEeCCCCCCHHHHHHHHHHHHHHc-C
Confidence            35899999999999999999999999999985 44543332222222    122223223345555555566666654 5


Q ss_pred             ccEEEEccC
Q 024338          105 VDILINNAG  113 (269)
Q Consensus       105 id~li~~ag  113 (269)
                      +|++|-...
T Consensus        77 id~vIP~~e   85 (389)
T PRK06849         77 IDLLIPTCE   85 (389)
T ss_pred             CCEEEECCh
Confidence            899987764

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=97.28  E-value=0.014  Score=44.42  Aligned_cols=112  Identities=21%  Similarity=0.285  Sum_probs=68.8

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC-cEEEEecCCHHHHHHHHHHHHHc---C-CcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGC-KVLVNYARSSKEAEEVCKEIEAS---G-GQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~-~v~i~~~r~~~~~~~~~~~l~~~---~-~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      .+.|+|++|.+|.+++..+...+. .-+++.+++++.++....++...   . ....+...|..+              +
T Consensus         2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~~--------------~   67 (141)
T PF00056_consen    2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGDYEA--------------L   67 (141)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESSGGG--------------G
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhcccccccccccccc--------------c
Confidence            478999999999999999999873 33444688877776666665443   1 223333222221              2


Q ss_pred             CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-CCCCeEEEEcC
Q 024338          103 GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMK-KKKGRIINIAS  163 (269)
Q Consensus       103 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~iv~isS  163 (269)
                      ...|++|..+|.....   ..   .-.+.++.|..-    .+.+.+.+.+ .+++.++.+|.
T Consensus        68 ~~aDivvitag~~~~~---g~---sR~~ll~~N~~i----~~~~~~~i~~~~p~~~vivvtN  119 (141)
T PF00056_consen   68 KDADIVVITAGVPRKP---GM---SRLDLLEANAKI----VKEIAKKIAKYAPDAIVIVVTN  119 (141)
T ss_dssp             TTESEEEETTSTSSST---TS---SHHHHHHHHHHH----HHHHHHHHHHHSTTSEEEE-SS
T ss_pred             ccccEEEEeccccccc---cc---cHHHHHHHhHhH----HHHHHHHHHHhCCccEEEEeCC
Confidence            3789999999975321   11   244556666665    4444444433 45677777764

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.27  E-value=0.0017  Score=58.40  Aligned_cols=77  Identities=14%  Similarity=0.216  Sum_probs=55.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      .++++|+++|.|+ |+.|+.+++.|+++|...+.++.|+.++.+++.+++..    ...+     ..++..+       .
T Consensus       177 ~~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~----~~~~-----~~~~l~~-------~  239 (414)
T PRK13940        177 DNISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRN----ASAH-----YLSELPQ-------L  239 (414)
T ss_pred             cCccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcC----CeEe-----cHHHHHH-------H
Confidence            4688999999999 89999999999999976555579998888888776521    1111     1222222       2


Q ss_pred             cCCccEEEEccCCC
Q 024338          102 WGTVDILINNAGIT  115 (269)
Q Consensus       102 ~~~id~li~~ag~~  115 (269)
                      +...|+||++.+..
T Consensus       240 l~~aDiVI~aT~a~  253 (414)
T PRK13940        240 IKKADIIIAAVNVL  253 (414)
T ss_pred             hccCCEEEECcCCC
Confidence            34689999998743

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=97.25  E-value=0.0058  Score=53.38  Aligned_cols=81  Identities=23%  Similarity=0.392  Sum_probs=51.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      -.|+++||+|++|++|..+++.+...|++++.+ .+++++.+.+.+.+   +.. .++  |-.+.++..+.+.+...  +
T Consensus       150 ~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~-~~~~~~~~~~~~~l---Ga~-~vi--~~~~~~~~~~~i~~~~~--~  220 (338)
T cd08295         150 KKGETVFVSAASGAVGQLVGQLAKLKGCYVVGS-AGSDEKVDLLKNKL---GFD-DAF--NYKEEPDLDAALKRYFP--N  220 (338)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHHhc---CCc-eeE--EcCCcccHHHHHHHhCC--C
Confidence            358999999999999999999888899998774 56665554443323   322 122  22222233333333321  3


Q ss_pred             CccEEEEccC
Q 024338          104 TVDILINNAG  113 (269)
Q Consensus       104 ~id~li~~ag  113 (269)
                      ++|+++.+.|
T Consensus       221 gvd~v~d~~g  230 (338)
T cd08295         221 GIDIYFDNVG  230 (338)
T ss_pred             CcEEEEECCC
Confidence            7999999887

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=97.23  E-value=0.003  Score=53.86  Aligned_cols=81  Identities=26%  Similarity=0.359  Sum_probs=55.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      ++++|+++|.|+ ||-+++++..|++.|+.-+.++.|+.++.+++.+.+............|.   .+.....       
T Consensus       124 ~~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~~~~---~~~~~~~-------  192 (283)
T PRK14027        124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDA---RGIEDVI-------  192 (283)
T ss_pred             CcCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEEecCH---hHHHHHH-------
Confidence            456899999998 79999999999999986555579999999888887753322111111222   1111111       


Q ss_pred             CCccEEEEccCC
Q 024338          103 GTVDILINNAGI  114 (269)
Q Consensus       103 ~~id~li~~ag~  114 (269)
                      ...|+|||+...
T Consensus       193 ~~~divINaTp~  204 (283)
T PRK14027        193 AAADGVVNATPM  204 (283)
T ss_pred             hhcCEEEEcCCC
Confidence            257999998754

>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]

Probab=97.23  E-value=0.025  Score=47.55  Aligned_cols=172  Identities=16%  Similarity=0.194  Sum_probs=103.0

Q ss_pred             CCEEEEeCCCCchHHHH--HHHHHHcCCcEEEEec-CCHH----------HHHHHHHHHHHcCCcEEEEEccCCCHHHHH
Q 024338           26 APVAVVTGASRGIGRAV--ATSLGKAGCKVLVNYA-RSSK----------EAEEVCKEIEASGGQALTFGGDVSKEADVE   92 (269)
Q Consensus        26 ~k~vlItGas~giG~~~--a~~l~~~G~~v~i~~~-r~~~----------~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~   92 (269)
                      .|.|||.|+|+|.|.+.  +..|- .|++.+.+.. |...          ....+.+..++.+--..-+..|.-+.+--+
T Consensus        41 PKkVLviGaSsGyGLa~RIsaaFG-~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~kGlyAksingDaFS~e~k~  119 (398)
T COG3007          41 PKKVLVIGASSGYGLAARISAAFG-PGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQKGLYAKSINGDAFSDEMKQ  119 (398)
T ss_pred             CceEEEEecCCcccHHHHHHHHhC-CCCceeeEEeecCCccCCCcchhhhHHHHHHHHHHhcCceeeecccchhhHHHHH
Confidence            38999999999988764  33333 5677654322 2111          112333444444545566888999888888


Q ss_pred             HHHHHHHHhcCCccEEEEccCCCCC----------------------------------CcccCCCHHHHHHHHHHHhHH
Q 024338           93 SMIKTAVDAWGTVDILINNAGITRD----------------------------------TLLMRMKKSQWQDVIDLNLTG  138 (269)
Q Consensus        93 ~~~~~~~~~~~~id~li~~ag~~~~----------------------------------~~~~~~~~~~~~~~~~~n~~~  138 (269)
                      +.++.++..+|++|.+|+.-+-...                                  ..++..+.++++....+.=--
T Consensus       120 kvIe~Ik~~~g~vDlvvYSlAsp~Rk~pktgev~~SalKpIg~a~~~~~ldt~kd~i~e~~lepAseqEI~~Tv~VMGGe  199 (398)
T COG3007         120 KVIEAIKQDFGKVDLVVYSLASPRRKHPKTGEVFRSALKPIGEAVSGRTLDTEKDVIIEATLEPASEQEIADTVAVMGGE  199 (398)
T ss_pred             HHHHHHHHhhccccEEEEeccCccccCCCcchhhHhhhcchhhhccccccccccceeeeeecccccHHHHHHHHHhhCcc
Confidence            9999999999999999988532100                                  011112344444443332111


Q ss_pred             HHH-HHHHHHHHHHhCCCCeEEEEcCCccccCCC--CChhhHHhHHHHHHHHHHHHHHhccCC
Q 024338          139 VFL-CTQAAAKIMMKKKKGRIINIASVVGLVGNI--GQANYSAAKAGVIGLTKTVAKEYASRN  198 (269)
Q Consensus       139 ~~~-l~~~~~~~l~~~~~~~iv~isS~~~~~~~~--~~~~Y~~sK~al~~~~~~la~e~~~~g  198 (269)
                      -|. .+.+++..-.-..+.+-+-.|-+......|  ..+.-+.+|.-++.-+..+...++..|
T Consensus       200 DWq~WidaLl~advlaeg~kTiAfsYiG~~iT~~IYw~GtiG~AK~DLd~~~~~inekLa~~g  262 (398)
T COG3007         200 DWQMWIDALLEADVLAEGAKTIAFSYIGEKITHPIYWDGTIGRAKKDLDQKSLAINEKLAALG  262 (398)
T ss_pred             hHHHHHHHHHhccccccCceEEEEEecCCccccceeeccccchhhhcHHHHHHHHHHHHHhcC
Confidence            111 223333211113456777777776655444  456779999999999999988887774

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=97.23  E-value=0.0095  Score=50.28  Aligned_cols=147  Identities=14%  Similarity=0.112  Sum_probs=83.3

Q ss_pred             ccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCc-EEEEecCCH-------------------HHHHHHHHHHHHcCCcEE
Q 024338           20 AAQNVEAPVAVVTGASRGIGRAVATSLGKAGCK-VLVNYARSS-------------------KEAEEVCKEIEASGGQAL   79 (269)
Q Consensus        20 ~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~-v~i~~~r~~-------------------~~~~~~~~~l~~~~~~~~   79 (269)
                      ....++++.|+|.|+. |+|.++++.|++.|.. +.+ ++.+.                   .+.+.+.+.+.+....+.
T Consensus        24 ~~~kL~~s~VlVvG~G-GVGs~vae~Lar~GVg~itL-iD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~  101 (268)
T PRK15116         24 ALQLFADAHICVVGIG-GVGSWAAEALARTGIGAITL-IDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECR  101 (268)
T ss_pred             HHHHhcCCCEEEECcC-HHHHHHHHHHHHcCCCEEEE-EeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcE
Confidence            3456788999999876 9999999999999944 444 34331                   122344445554443333


Q ss_pred             EEEc-cCCCHHHHHHHHHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeE
Q 024338           80 TFGG-DVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRI  158 (269)
Q Consensus        80 ~~~~-Dls~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~i  158 (269)
                      +... +.-+.+...+++.      .+.|+||.+....                     ..-..+.+.+.     +.+-.+
T Consensus       102 V~~i~~~i~~e~~~~ll~------~~~D~VIdaiD~~---------------------~~k~~L~~~c~-----~~~ip~  149 (268)
T PRK15116        102 VTVVDDFITPDNVAEYMS------AGFSYVIDAIDSV---------------------RPKAALIAYCR-----RNKIPL  149 (268)
T ss_pred             EEEEecccChhhHHHHhc------CCCCEEEEcCCCH---------------------HHHHHHHHHHH-----HcCCCE
Confidence            3222 2223444444332      2578888776521                     11112222221     233456


Q ss_pred             EEEcCCccccCCCCChhhHHhHHHHHHHHHHHHHHhcc-CCeE
Q 024338          159 INIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYAS-RNIN  200 (269)
Q Consensus       159 v~isS~~~~~~~~~~~~Y~~sK~al~~~~~~la~e~~~-~gi~  200 (269)
                      |...+.++.......-.-..+|.....|++.+++++++ +||+
T Consensus       150 I~~gGag~k~dp~~~~~~di~~t~~~pla~~~R~~lr~~~~~~  192 (268)
T PRK15116        150 VTTGGAGGQIDPTQIQVVDLAKTIQDPLAAKLRERLKSDFGVV  192 (268)
T ss_pred             EEECCcccCCCCCeEEEEeeecccCChHHHHHHHHHHHhhCCC
Confidence            66655555444333334455677778899999999987 5664

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=97.19  E-value=0.0093  Score=49.28  Aligned_cols=151  Identities=16%  Similarity=0.176  Sum_probs=86.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCH-------------------HHHHHHHHHHHHcCCc--EEE
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSS-------------------KEAEEVCKEIEASGGQ--ALT   80 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~-------------------~~~~~~~~~l~~~~~~--~~~   80 (269)
                      ..++++.|+|.|++ |+|..+++.|++.|..-+.+++.+.                   .+.+.+.+.+++....  +..
T Consensus         7 ~~L~~~~VlVvG~G-GvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~   85 (231)
T cd00755           7 EKLRNAHVAVVGLG-GVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDA   85 (231)
T ss_pred             HHHhCCCEEEECCC-HHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEE
Confidence            34678889999876 9999999999999976554445432                   2334445555554443  444


Q ss_pred             EEccCCCHHHHHHHHHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEE
Q 024338           81 FGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIIN  160 (269)
Q Consensus        81 ~~~Dls~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~  160 (269)
                      +...++ .+....++.      ...|++|.+..-             +.        .-..+.+.+.     +.+-.+|.
T Consensus        86 ~~~~i~-~~~~~~l~~------~~~D~VvdaiD~-------------~~--------~k~~L~~~c~-----~~~ip~I~  132 (231)
T cd00755          86 VEEFLT-PDNSEDLLG------GDPDFVVDAIDS-------------IR--------AKVALIAYCR-----KRKIPVIS  132 (231)
T ss_pred             eeeecC-HhHHHHHhc------CCCCEEEEcCCC-------------HH--------HHHHHHHHHH-----HhCCCEEE
Confidence            444444 333333332      258888887531             11        1112223232     12334555


Q ss_pred             EcCCccccCCCCChhhHHhHHHHHHHHHHHHHHhccCCeE--EEEEec
Q 024338          161 IASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNIN--VNAIAP  206 (269)
Q Consensus       161 isS~~~~~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~--v~~v~p  206 (269)
                      ..+.++.........-..+|.-...+++.+++++.++|++  +.+|.-
T Consensus       133 s~g~g~~~dp~~i~i~di~~t~~~pla~~~R~~Lrk~~~~~~~~~v~S  180 (231)
T cd00755         133 SMGAGGKLDPTRIRVADISKTSGDPLARKVRKRLRKRGIFFGVPVVYS  180 (231)
T ss_pred             EeCCcCCCCCCeEEEccEeccccCcHHHHHHHHHHHcCCCCCeEEEeC
Confidence            5554444332222333455666677999999999988885  555443

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.18  E-value=0.0043  Score=53.00  Aligned_cols=77  Identities=26%  Similarity=0.310  Sum_probs=54.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      ++++|+++|.|+ ||.|++++..|++.|+.-+.++.|+.++.+++.+.+........+...     +++.+       ..
T Consensus       124 ~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~-----~~~~~-------~~  190 (284)
T PRK12549        124 DASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAG-----SDLAA-------AL  190 (284)
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEec-----cchHh-------hh
Confidence            467899999998 589999999999999854444799999999988887654332222211     11111       12


Q ss_pred             CCccEEEEcc
Q 024338          103 GTVDILINNA  112 (269)
Q Consensus       103 ~~id~li~~a  112 (269)
                      ...|+|||+.
T Consensus       191 ~~aDiVInaT  200 (284)
T PRK12549        191 AAADGLVHAT  200 (284)
T ss_pred             CCCCEEEECC
Confidence            3689999994

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=97.14  E-value=0.011  Score=52.08  Aligned_cols=80  Identities=25%  Similarity=0.405  Sum_probs=51.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      .|+++||+|++|++|..+++.....|++|+. +.+++++.+.+.+++   +.+. ++  |-.+.++..+.+.+...  ++
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~-~~~~~~k~~~~~~~l---Ga~~-vi--~~~~~~~~~~~i~~~~~--~g  228 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVG-SAGSSQKVDLLKNKL---GFDE-AF--NYKEEPDLDAALKRYFP--EG  228 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEE-EcCCHHHHHHHHHhc---CCCE-EE--ECCCcccHHHHHHHHCC--CC
Confidence            5899999999999999999888889999777 456665554433233   3322 22  22222223333333221  36


Q ss_pred             ccEEEEccC
Q 024338          105 VDILINNAG  113 (269)
Q Consensus       105 id~li~~ag  113 (269)
                      +|+++.+.|
T Consensus       229 vD~v~d~vG  237 (348)
T PLN03154        229 IDIYFDNVG  237 (348)
T ss_pred             cEEEEECCC
Confidence            999999887

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.13  E-value=0.0034  Score=53.58  Aligned_cols=80  Identities=14%  Similarity=0.141  Sum_probs=54.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      ++++|+++|.|+ ||.|++++..|++.|+.-+.++.|+.++.+++++.+.... .+  ..  +...++..       ...
T Consensus       122 ~~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~-~~--~~--~~~~~~~~-------~~~  188 (282)
T TIGR01809       122 PLAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVG-VI--TR--LEGDSGGL-------AIE  188 (282)
T ss_pred             ccCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcC-cc--ee--ccchhhhh-------hcc
Confidence            467899999987 7999999999999998644447999999888887764321 11  11  11111121       122


Q ss_pred             CCccEEEEccCCC
Q 024338          103 GTVDILINNAGIT  115 (269)
Q Consensus       103 ~~id~li~~ag~~  115 (269)
                      ...|+|||+....
T Consensus       189 ~~~DiVInaTp~g  201 (282)
T TIGR01809       189 KAAEVLVSTVPAD  201 (282)
T ss_pred             cCCCEEEECCCCC
Confidence            4689999997653

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK05086 malate dehydrogenase; Provisional

Probab=97.12  E-value=0.0031  Score=54.64  Aligned_cols=117  Identities=20%  Similarity=0.202  Sum_probs=60.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHH-cC-CcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           27 PVAVVTGASRGIGRAVATSLGK-AG-CKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~-~G-~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      +.++|+||+|++|.+++..+.. .+ .+.+.+.++++. .....-.+....... .+..  .+.+++.+.       +..
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~g~alDl~~~~~~~-~i~~--~~~~d~~~~-------l~~   69 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TPGVAVDLSHIPTAV-KIKG--FSGEDPTPA-------LEG   69 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-CcceehhhhcCCCCc-eEEE--eCCCCHHHH-------cCC
Confidence            4689999999999999998865 33 233333566543 211111222111011 1222  111111122       236


Q ss_pred             ccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Q 024338          105 VDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASV  164 (269)
Q Consensus       105 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~  164 (269)
                      .|+||.++|......      ..-...+..|...    ++.+.+.|.+....++|.+.|-
T Consensus        70 ~DiVIitaG~~~~~~------~~R~dll~~N~~i----~~~ii~~i~~~~~~~ivivvsN  119 (312)
T PRK05086         70 ADVVLISAGVARKPG------MDRSDLFNVNAGI----VKNLVEKVAKTCPKACIGIITN  119 (312)
T ss_pred             CCEEEEcCCCCCCCC------CCHHHHHHHHHHH----HHHHHHHHHHhCCCeEEEEccC
Confidence            999999999754321      1234556667665    5555555554444455555543

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=97.09  E-value=0.0046  Score=53.84  Aligned_cols=114  Identities=16%  Similarity=0.134  Sum_probs=68.2

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC-------cEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHH--H--HH
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGC-------KVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVES--M--IK   96 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~-------~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~--~--~~   96 (269)
                      .+.|+|++|.+|..++..++..|.       .+++ .++++...            .......|++|......  .  ..
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~L-iD~~~~~~------------~a~g~~~Dl~d~~~~~~~~~~~~~   67 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHL-LDIPPAMK------------VLEGVVMELMDCAFPLLDGVVPTH   67 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEE-EecCCccc------------ccceeEeehhcccchhcCceeccC
Confidence            378999999999999999998664       2444 56543210            11224445555441110  0  00


Q ss_pred             HHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC--CCCeEEEEcCC
Q 024338           97 TAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKK--KKGRIINIASV  164 (269)
Q Consensus        97 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~--~~~~iv~isS~  164 (269)
                      ...+.+...|++|+.||.....      .+...+.++.|+.-    .+.+.+.+.+.  +.+.++++|..
T Consensus        68 ~~~~~~~~aDiVVitAG~~~~~------~~tr~~ll~~N~~i----~k~i~~~i~~~~~~~~iiivvsNP  127 (324)
T TIGR01758        68 DPAVAFTDVDVAILVGAFPRKE------GMERRDLLSKNVKI----FKEQGRALDKLAKKDCKVLVVGNP  127 (324)
T ss_pred             ChHHHhCCCCEEEEcCCCCCCC------CCcHHHHHHHHHHH----HHHHHHHHHhhCCCCeEEEEeCCc
Confidence            1123345799999999975331      22356677777765    66666666554  46777777753

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=97.07  E-value=0.035  Score=47.72  Aligned_cols=41  Identities=27%  Similarity=0.297  Sum_probs=34.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEA   64 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~   64 (269)
                      .++++++++|.|. |++|+.+++.|...|++|.+ +.|+++..
T Consensus       148 ~~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v-~~r~~~~~  188 (296)
T PRK08306        148 ITIHGSNVLVLGF-GRTGMTLARTLKALGANVTV-GARKSAHL  188 (296)
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEE-EECCHHHH
Confidence            4678999999997 67999999999999998888 47776543

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.05  E-value=0.0069  Score=53.05  Aligned_cols=84  Identities=20%  Similarity=0.305  Sum_probs=57.1

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCH---------------------HHHHHHHHHHHHcC--Cc
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSS---------------------KEAEEVCKEIEASG--GQ   77 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~---------------------~~~~~~~~~l~~~~--~~   77 (269)
                      -..+++++|+|.|+ ||+|..+++.|+..|...+.+++++.                     .+.+.+.+.+++..  .+
T Consensus        19 Q~~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~   97 (338)
T PRK12475         19 QRKIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVE   97 (338)
T ss_pred             HHhhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcE
Confidence            35678899999997 58999999999999985454456653                     23444556666553  34


Q ss_pred             EEEEEccCCCHHHHHHHHHHHHHhcCCccEEEEccC
Q 024338           78 ALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAG  113 (269)
Q Consensus        78 ~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~ag  113 (269)
                      +..+..|++. +.+++++       ...|++|.+..
T Consensus        98 i~~~~~~~~~-~~~~~~~-------~~~DlVid~~D  125 (338)
T PRK12475         98 IVPVVTDVTV-EELEELV-------KEVDLIIDATD  125 (338)
T ss_pred             EEEEeccCCH-HHHHHHh-------cCCCEEEEcCC
Confidence            5566667763 3444443       26788887763

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.05  E-value=0.0029  Score=54.07  Aligned_cols=77  Identities=25%  Similarity=0.314  Sum_probs=60.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTV  105 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i  105 (269)
                      ...++|-||+|..|.-+|++|+.+|....+ .+|+.+++..+..+|   +.....+.+++  ++.+++.++       ..
T Consensus         6 e~d~iiYGAtGy~G~lvae~l~~~g~~~aL-AgRs~~kl~~l~~~L---G~~~~~~p~~~--p~~~~~~~~-------~~   72 (382)
T COG3268           6 EYDIIIYGATGYAGGLVAEYLAREGLTAAL-AGRSSAKLDALRASL---GPEAAVFPLGV--PAALEAMAS-------RT   72 (382)
T ss_pred             ceeEEEEccccchhHHHHHHHHHcCCchhh-ccCCHHHHHHHHHhc---CccccccCCCC--HHHHHHHHh-------cc
Confidence            367899999999999999999999988755 799999999888777   55555666655  444444444       78


Q ss_pred             cEEEEccCCC
Q 024338          106 DILINNAGIT  115 (269)
Q Consensus       106 d~li~~ag~~  115 (269)
                      ++|+||+|-.
T Consensus        73 ~VVlncvGPy   82 (382)
T COG3268          73 QVVLNCVGPY   82 (382)
T ss_pred             eEEEeccccc
Confidence            9999999954

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=97.05  E-value=0.025  Score=52.05  Aligned_cols=84  Identities=23%  Similarity=0.208  Sum_probs=55.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCC-------------CHHH
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVS-------------KEAD   90 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls-------------~~~~   90 (269)
                      ..+.+++|.|+ |.+|...+..+...|+.|+++ .++.+.++... ++   +.+  ++..|..             +.+.
T Consensus       162 vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~-d~~~~rle~a~-~l---Ga~--~v~v~~~e~g~~~~gYa~~~s~~~  233 (511)
T TIGR00561       162 VPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAF-DTRPEVKEQVQ-SM---GAE--FLELDFKEEGGSGDGYAKVMSEEF  233 (511)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEE-eCCHHHHHHHH-Hc---CCe--EEeccccccccccccceeecCHHH
Confidence            45689999996 799999999999999998874 66666544322 22   332  3344432             2333


Q ss_pred             HHHHHHHHHHhcCCccEEEEccCCC
Q 024338           91 VESMIKTAVDAWGTVDILINNAGIT  115 (269)
Q Consensus        91 ~~~~~~~~~~~~~~id~li~~ag~~  115 (269)
                      .++..+.+.++..+.|++|+++-+.
T Consensus       234 ~~~~~~~~~e~~~~~DIVI~Talip  258 (511)
T TIGR00561       234 IAAEMELFAAQAKEVDIIITTALIP  258 (511)
T ss_pred             HHHHHHHHHHHhCCCCEEEECcccC
Confidence            4444444555566899999999543

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.04  E-value=0.011  Score=51.13  Aligned_cols=113  Identities=18%  Similarity=0.212  Sum_probs=70.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC--cEEEEecCCHHHHHHHHHHHHHc----CCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGC--KVLVNYARSSKEAEEVCKEIEAS----GGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~--~v~i~~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      +.+.|.|+ |++|..++..|+.+|.  ++++ ++++++..+.+..++.+.    .....+..   .+.++          
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l-~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~---~~~~~----------   65 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVL-IDINEEKAEGEALDLEDALAFLPSPVKIKA---GDYSD----------   65 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEE-EeCCcchhhHhHhhHHHHhhccCCCeEEEc---CCHHH----------
Confidence            35788996 8999999999999994  5555 688888777777776543    12222221   22211          


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-CCCCeEEEEcCCc
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMK-KKKGRIINIASVV  165 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~iv~isS~~  165 (269)
                       +...|++|+++|.....   ..+   -.+.++.|..-    .+.+.+.+.+ .+.+.++++|-..
T Consensus        66 -l~~aDIVIitag~~~~~---g~~---R~dll~~N~~i----~~~~~~~i~~~~~~~~vivvsNP~  120 (306)
T cd05291          66 -CKDADIVVITAGAPQKP---GET---RLDLLEKNAKI----MKSIVPKIKASGFDGIFLVASNPV  120 (306)
T ss_pred             -hCCCCEEEEccCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHHHhCCCeEEEEecChH
Confidence             13789999999974321   122   23455555554    4555554443 4567788877543

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=97.03  E-value=0.0028  Score=57.57  Aligned_cols=81  Identities=17%  Similarity=0.143  Sum_probs=55.2

Q ss_pred             CCCCCCEEEEeCC----------------CCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccC
Q 024338           22 QNVEAPVAVVTGA----------------SRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDV   85 (269)
Q Consensus        22 ~~~~~k~vlItGa----------------s~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl   85 (269)
                      .+++||.+|||+|                ||..|.++|+.++.+|++|.++.+...  +       . ....+.++  ++
T Consensus       252 ~~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~--~-------~-~p~~v~~i--~V  319 (475)
T PRK13982        252 KPLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD--L-------A-DPQGVKVI--HV  319 (475)
T ss_pred             cccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC--C-------C-CCCCceEE--Ee
Confidence            4699999999998                468999999999999999998654321  1       0 11223333  33


Q ss_pred             CCHHHHHHHHHHHHHhcCCccEEEEccCCCCCC
Q 024338           86 SKEADVESMIKTAVDAWGTVDILINNAGITRDT  118 (269)
Q Consensus        86 s~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~  118 (269)
                      .+.+++.+   .+.+.++ .|++|++|+..+..
T Consensus       320 ~ta~eM~~---av~~~~~-~Di~I~aAAVaDyr  348 (475)
T PRK13982        320 ESARQMLA---AVEAALP-ADIAIFAAAVADWR  348 (475)
T ss_pred             cCHHHHHH---HHHhhCC-CCEEEEecccccee
Confidence            44444444   4444444 69999999987553

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=96.99  E-value=0.0019  Score=60.02  Aligned_cols=48  Identities=27%  Similarity=0.473  Sum_probs=41.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEI   71 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l   71 (269)
                      .++++|+++|+|+ ||+|++++..|+++|+++++ +.|+.++.+++.+++
T Consensus       375 ~~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i-~nR~~e~a~~la~~l  422 (529)
T PLN02520        375 SPLAGKLFVVIGA-GGAGKALAYGAKEKGARVVI-ANRTYERAKELADAV  422 (529)
T ss_pred             cCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEE-EcCCHHHHHHHHHHh
Confidence            3578999999999 69999999999999998776 688888888777665

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=96.98  E-value=0.03  Score=51.59  Aligned_cols=112  Identities=25%  Similarity=0.294  Sum_probs=68.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCH-------------HH
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKE-------------AD   90 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~-------------~~   90 (269)
                      ..+.+|+|+|+. .+|...+......|+.|++ +++++++++... ++   +.+...+  |..+.             +.
T Consensus       163 ~pg~kVlViGaG-~iGL~Ai~~Ak~lGA~V~a-~D~~~~rle~ae-sl---GA~~v~i--~~~e~~~~~~gya~~~s~~~  234 (509)
T PRK09424        163 VPPAKVLVIGAG-VAGLAAIGAAGSLGAIVRA-FDTRPEVAEQVE-SM---GAEFLEL--DFEEEGGSGDGYAKVMSEEF  234 (509)
T ss_pred             cCCCEEEEECCc-HHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHH-Hc---CCeEEEe--ccccccccccchhhhcchhH
Confidence            568999999986 8999999999999998777 577776665332 23   4443222  22211             11


Q ss_pred             HHHHHHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Q 024338           91 VESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASV  164 (269)
Q Consensus        91 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~  164 (269)
                      .++..+.+.+..+..|++|.+++.....                   ++..+++..+..|  ++++.|+.++..
T Consensus       235 ~~~~~~~~~~~~~gaDVVIetag~pg~~-------------------aP~lit~~~v~~m--kpGgvIVdvg~~  287 (509)
T PRK09424        235 IKAEMALFAEQAKEVDIIITTALIPGKP-------------------APKLITAEMVASM--KPGSVIVDLAAE  287 (509)
T ss_pred             HHHHHHHHHhccCCCCEEEECCCCCccc-------------------CcchHHHHHHHhc--CCCCEEEEEccC
Confidence            1222222233335799999999975421                   1222235555555  567888888763

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.95  E-value=0.0016  Score=52.72  Aligned_cols=48  Identities=19%  Similarity=0.303  Sum_probs=40.7

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKE   70 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~   70 (269)
                      ..+++||+++|+|.. .+|+.+++.|.+.|++|++ ..++.+..+++.+.
T Consensus        23 ~~~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv-~D~~~~~~~~~~~~   70 (200)
T cd01075          23 TDSLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIV-ADINEEAVARAAEL   70 (200)
T ss_pred             CCCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEE-EcCCHHHHHHHHHH
Confidence            567899999999996 8999999999999999987 57887766666554

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.91  E-value=0.013  Score=50.99  Aligned_cols=98  Identities=19%  Similarity=0.361  Sum_probs=63.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      -.|++++|+|+. |+|...++.....|++|++ .++++++++. ++++   +.+.. +  |-+|.+..+.+-+       
T Consensus       165 ~pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via-~~~~~~K~e~-a~~l---GAd~~-i--~~~~~~~~~~~~~-------  228 (339)
T COG1064         165 KPGKWVAVVGAG-GLGHMAVQYAKAMGAEVIA-ITRSEEKLEL-AKKL---GADHV-I--NSSDSDALEAVKE-------  228 (339)
T ss_pred             CCCCEEEEECCc-HHHHHHHHHHHHcCCeEEE-EeCChHHHHH-HHHh---CCcEE-E--EcCCchhhHHhHh-------
Confidence            358999999999 9998777777779999998 4777776643 3333   33322 2  3334443333332       


Q ss_pred             CccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCc
Q 024338          104 TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVV  165 (269)
Q Consensus       104 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  165 (269)
                      .+|++|.+++ ...                         ....++.+  +..|+++.++-..
T Consensus       229 ~~d~ii~tv~-~~~-------------------------~~~~l~~l--~~~G~~v~vG~~~  262 (339)
T COG1064         229 IADAIIDTVG-PAT-------------------------LEPSLKAL--RRGGTLVLVGLPG  262 (339)
T ss_pred             hCcEEEECCC-hhh-------------------------HHHHHHHH--hcCCEEEEECCCC
Confidence            2899999997 221                         22334444  5678999887653

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.89  E-value=0.044  Score=50.43  Aligned_cols=80  Identities=21%  Similarity=0.207  Sum_probs=54.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      ++++|.++|.|+ |++|.++|+.|+++|+.|.+...++.+......+.+++.+..+  ...+-..             ..
T Consensus        13 ~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~--~~~~~~~-------------~~   76 (480)
T PRK01438         13 DWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATV--RLGPGPT-------------LP   76 (480)
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEE--EECCCcc-------------cc
Confidence            357899999997 6799999999999999998864455544445555666544333  3222111             01


Q ss_pred             CCccEEEEccCCCCCC
Q 024338          103 GTVDILINNAGITRDT  118 (269)
Q Consensus       103 ~~id~li~~ag~~~~~  118 (269)
                      ...|.||...|+.+..
T Consensus        77 ~~~D~Vv~s~Gi~~~~   92 (480)
T PRK01438         77 EDTDLVVTSPGWRPDA   92 (480)
T ss_pred             CCCCEEEECCCcCCCC
Confidence            3689999999986543

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=96.88  E-value=0.0087  Score=52.07  Aligned_cols=150  Identities=13%  Similarity=0.110  Sum_probs=90.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-------cEEEEecCCHH--HHHHHHHHHHHcC----CcEEEEEccCCCHHHHHH
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGC-------KVLVNYARSSK--EAEEVCKEIEASG----GQALTFGGDVSKEADVES   93 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~-------~v~i~~~r~~~--~~~~~~~~l~~~~----~~~~~~~~Dls~~~~~~~   93 (269)
                      +.+.|+|++|.+|..++..++.+|.       ++++ .+.++.  .++...-++....    .++.     ++. +.   
T Consensus         3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L-~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~-----i~~-~~---   72 (322)
T cd01338           3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQL-LELPQALKALEGVAMELEDCAFPLLAEIV-----ITD-DP---   72 (322)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEE-EecCCcccccceeehhhhhccccccCceE-----Eec-Cc---
Confidence            5789999999999999999998874       4555 455332  2333333332211    1111     111 00   


Q ss_pred             HHHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC--CCCeEEEEcCCcc-----
Q 024338           94 MIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKK--KKGRIINIASVVG-----  166 (269)
Q Consensus        94 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~--~~~~iv~isS~~~-----  166 (269)
                           -+.+..-|++|.+||.... +  ..+   -.+.+..|+.-    .+.+.+.+.+.  +.+.+|++|--.-     
T Consensus        73 -----~~~~~daDivvitaG~~~k-~--g~t---R~dll~~N~~i----~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~  137 (322)
T cd01338          73 -----NVAFKDADWALLVGAKPRG-P--GME---RADLLKANGKI----FTAQGKALNDVASRDVKVLVVGNPCNTNALI  137 (322)
T ss_pred             -----HHHhCCCCEEEEeCCCCCC-C--CCc---HHHHHHHHHHH----HHHHHHHHHhhCCCCeEEEEecCcHHHHHHH
Confidence                 1122378999999997432 1  122   34456666654    66666666543  3677887775332     


Q ss_pred             ---ccC-CCCChhhHHhHHHHHHHHHHHHHHhcc--CCeEE
Q 024338          167 ---LVG-NIGQANYSAAKAGVIGLTKTVAKEYAS--RNINV  201 (269)
Q Consensus       167 ---~~~-~~~~~~Y~~sK~al~~~~~~la~e~~~--~gi~v  201 (269)
                         ..+ .|....|+.++.--.-|...++..+.-  ..|+.
T Consensus       138 ~~k~sg~~p~~~ViG~t~LDs~Rl~~~la~~lgv~~~~v~~  178 (322)
T cd01338         138 AMKNAPDIPPDNFTAMTRLDHNRAKSQLAKKAGVPVTDVKN  178 (322)
T ss_pred             HHHHcCCCChHheEEehHHHHHHHHHHHHHHhCcChhHeEE
Confidence               132 667778999888888888888887643  24553

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK14968 putative methyltransferase; Provisional

Probab=96.86  E-value=0.025  Score=44.83  Aligned_cols=121  Identities=15%  Similarity=0.109  Sum_probs=69.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCc---EEEEEccCCCHHHHHHHHHHHHH
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQ---ALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~---~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      .+++++|-.|+..|.   ++..+++++.+++. +..+++..+...+.+...+.+   +.++.+|+.+.         ..+
T Consensus        22 ~~~~~vLd~G~G~G~---~~~~l~~~~~~v~~-~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~---------~~~   88 (188)
T PRK14968         22 KKGDRVLEVGTGSGI---VAIVAAKNGKKVVG-VDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEP---------FRG   88 (188)
T ss_pred             cCCCEEEEEccccCH---HHHHHHhhcceEEE-EECCHHHHHHHHHHHHHcCCCCcceEEEecccccc---------ccc
Confidence            367889999988666   55556666888877 578877776666666554433   77788887542         111


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHH---HHHHHHHHHHHHHhCCCCeEEEEc
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTG---VFLCTQAAAKIMMKKKKGRIINIA  162 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~---~~~l~~~~~~~l~~~~~~~iv~is  162 (269)
                        +.+|.++.|.......+.... .+.+...+.....+   .-.+++.+.+.|  +++|.++++.
T Consensus        89 --~~~d~vi~n~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~L--k~gG~~~~~~  148 (188)
T PRK14968         89 --DKFDVILFNPPYLPTEEEEEW-DDWLNYALSGGKDGREVIDRFLDEVGRYL--KPGGRILLLQ  148 (188)
T ss_pred             --cCceEEEECCCcCCCCchhhh-hhhhhhhhccCcChHHHHHHHHHHHHHhc--CCCeEEEEEE
Confidence              268999998876543322111 11222222222221   223455666666  4567766554

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=96.85  E-value=0.01  Score=48.01  Aligned_cols=86  Identities=20%  Similarity=0.336  Sum_probs=55.3

Q ss_pred             cccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCC-------------------HHHHHHHHHHHHHcCCc--
Q 024338           19 EAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARS-------------------SKEAEEVCKEIEASGGQ--   77 (269)
Q Consensus        19 ~~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~-------------------~~~~~~~~~~l~~~~~~--   77 (269)
                      +....+++++|+|.|+ ||+|.++++.|+..|..-+.+.+.+                   ..+.+.+.+.+++....  
T Consensus        14 ~~q~kl~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~   92 (202)
T TIGR02356        14 EGQQRLLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQ   92 (202)
T ss_pred             HHHHHhcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCE
Confidence            3345788899999995 5999999999999998544435555                   23445556666655443  


Q ss_pred             EEEEEccCCCHHHHHHHHHHHHHhcCCccEEEEccC
Q 024338           78 ALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAG  113 (269)
Q Consensus        78 ~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~ag  113 (269)
                      +..+..++.+ +.+.+++       ...|++|.+..
T Consensus        93 i~~~~~~i~~-~~~~~~~-------~~~D~Vi~~~d  120 (202)
T TIGR02356        93 VTALKERVTA-ENLELLI-------NNVDLVLDCTD  120 (202)
T ss_pred             EEEehhcCCH-HHHHHHH-------hCCCEEEECCC
Confidence            4444444443 3333333       37899988763

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=96.84  E-value=0.029  Score=48.66  Aligned_cols=116  Identities=14%  Similarity=0.203  Sum_probs=72.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC--cEEEEecCCHHHHHHHHHHHHHcC---CcEEEEEccCCCHHHHHHHHHH
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGC--KVLVNYARSSKEAEEVCKEIEASG---GQALTFGGDVSKEADVESMIKT   97 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~--~v~i~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dls~~~~~~~~~~~   97 (269)
                      +=+++.+.|+|+ |.+|..++..++..|.  ++++ .+++.+.++....++....   .++.+. .  .+.+       .
T Consensus         3 ~~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L-~D~~~~~~~g~~~Dl~~~~~~~~~~~i~-~--~~~~-------~   70 (315)
T PRK00066          3 KKQHNKVVLVGD-GAVGSSYAYALVNQGIADELVI-IDINKEKAEGDAMDLSHAVPFTSPTKIY-A--GDYS-------D   70 (315)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEE-EeCCCchhHHHHHHHHhhccccCCeEEE-e--CCHH-------H
Confidence            335678999998 9999999999999885  4444 6787777766666665432   122222 1  1211       1


Q ss_pred             HHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-CCCCeEEEEcCC
Q 024338           98 AVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMK-KKKGRIINIASV  164 (269)
Q Consensus        98 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~iv~isS~  164 (269)
                          +..-|++|..||.....   ..+   -.+.++.|..-    .+.+.+.+.+ ...+.++++|-.
T Consensus        71 ----~~~adivIitag~~~k~---g~~---R~dll~~N~~i----~~~i~~~i~~~~~~~~vivvsNP  124 (315)
T PRK00066         71 ----CKDADLVVITAGAPQKP---GET---RLDLVEKNLKI----FKSIVGEVMASGFDGIFLVASNP  124 (315)
T ss_pred             ----hCCCCEEEEecCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHHHhCCCeEEEEccCc
Confidence                23789999999975331   122   24556666554    4444554443 356778877753

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=96.83  E-value=0.014  Score=50.89  Aligned_cols=77  Identities=23%  Similarity=0.412  Sum_probs=50.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC--
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG--  103 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~--  103 (269)
                      |+++||+||+||+|...++.....|+.+++.+++ +++.+ ++.++   +.+..+   |..+.+    +.+++++..+  
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s-~~k~~-~~~~l---GAd~vi---~y~~~~----~~~~v~~~t~g~  210 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSS-SEKLE-LLKEL---GADHVI---NYREED----FVEQVRELTGGK  210 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecC-HHHHH-HHHhc---CCCEEE---cCCccc----HHHHHHHHcCCC
Confidence            8999999999999999888888899877775444 44443 33333   433221   233322    4444444433  


Q ss_pred             CccEEEEccCC
Q 024338          104 TVDILINNAGI  114 (269)
Q Consensus       104 ~id~li~~ag~  114 (269)
                      ++|+++...|.
T Consensus       211 gvDvv~D~vG~  221 (326)
T COG0604         211 GVDVVLDTVGG  221 (326)
T ss_pred             CceEEEECCCH
Confidence            59999999883

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=96.83  E-value=0.007  Score=44.95  Aligned_cols=77  Identities=23%  Similarity=0.339  Sum_probs=57.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHH-cCCcEEEEecCCH----------------------HHHHHHHHHHHHcCCcEEEEEcc
Q 024338           28 VAVVTGASRGIGRAVATSLGK-AGCKVLVNYARSS----------------------KEAEEVCKEIEASGGQALTFGGD   84 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~-~G~~v~i~~~r~~----------------------~~~~~~~~~l~~~~~~~~~~~~D   84 (269)
                      .+.|.|++|.+|+.+++.+.+ .|.+++..+.++.                      ..++++.+.     .   -+..|
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~-----~---DVvID   73 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE-----A---DVVID   73 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH---------SEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc-----C---CEEEE
Confidence            589999999999999999998 6888777666766                      223333332     1   16679


Q ss_pred             CCCHHHHHHHHHHHHHhcCCccEEEEccCC
Q 024338           85 VSKEADVESMIKTAVDAWGTVDILINNAGI  114 (269)
Q Consensus        85 ls~~~~~~~~~~~~~~~~~~id~li~~ag~  114 (269)
                      +|.++.+...++.+.+.  ++.+|+-..|.
T Consensus        74 fT~p~~~~~~~~~~~~~--g~~~ViGTTG~  101 (124)
T PF01113_consen   74 FTNPDAVYDNLEYALKH--GVPLVIGTTGF  101 (124)
T ss_dssp             ES-HHHHHHHHHHHHHH--T-EEEEE-SSS
T ss_pred             cCChHHhHHHHHHHHhC--CCCEEEECCCC
Confidence            99999999999998887  88899988886

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.82  E-value=0.027  Score=46.87  Aligned_cols=104  Identities=26%  Similarity=0.374  Sum_probs=64.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      .++++++|+|+++ +|..+++.+...|.+++++ .++++..+.+ +++   +.. ..  .|..+.+..+.+.   ....+
T Consensus       133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~-~~~~~~~~~~-~~~---g~~-~~--~~~~~~~~~~~~~---~~~~~  200 (271)
T cd05188         133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVT-DRSDEKLELA-KEL---GAD-HV--IDYKEEDLEEELR---LTGGG  200 (271)
T ss_pred             CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEE-cCCHHHHHHH-HHh---CCc-ee--ccCCcCCHHHHHH---HhcCC
Confidence            4688999999998 9999999999999998774 6665544332 222   221 11  2333333333322   12224


Q ss_pred             CccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcc
Q 024338          104 TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVG  166 (269)
Q Consensus       104 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  166 (269)
                      ++|+++++++..                         ...+..++.+  +..|+++.++....
T Consensus       201 ~~d~vi~~~~~~-------------------------~~~~~~~~~l--~~~G~~v~~~~~~~  236 (271)
T cd05188         201 GADVVIDAVGGP-------------------------ETLAQALRLL--RPGGRIVVVGGTSG  236 (271)
T ss_pred             CCCEEEECCCCH-------------------------HHHHHHHHhc--ccCCEEEEEccCCC
Confidence            799999998731                         1133344444  46789999887644

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>cd08293 PTGR2 Prostaglandin reductase

Probab=96.73  E-value=0.011  Score=51.67  Aligned_cols=78  Identities=22%  Similarity=0.345  Sum_probs=49.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCC-cEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGC-KVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~-~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      ++++||+|++|++|..+++.....|+ +|+. +.+++++.+.+.+++   +.+. ++  |..+ +++.+.+.++..  ++
T Consensus       155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~-~~~s~~~~~~~~~~l---Ga~~-vi--~~~~-~~~~~~i~~~~~--~g  224 (345)
T cd08293         155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVG-ICGSDEKCQLLKSEL---GFDA-AI--NYKT-DNVAERLRELCP--EG  224 (345)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHcCCCEEEE-EcCCHHHHHHHHHhc---CCcE-EE--ECCC-CCHHHHHHHHCC--CC
Confidence            38999999999999999988888898 6777 466666555444433   3322 22  2222 223333333322  36


Q ss_pred             ccEEEEccC
Q 024338          105 VDILINNAG  113 (269)
Q Consensus       105 id~li~~ag  113 (269)
                      +|+++.+.|
T Consensus       225 vd~vid~~g  233 (345)
T cd08293         225 VDVYFDNVG  233 (345)
T ss_pred             ceEEEECCC
Confidence            999999887

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=96.71  E-value=0.0017  Score=43.12  Aligned_cols=32  Identities=31%  Similarity=0.480  Sum_probs=22.8

Q ss_pred             CCC-CEEEEeCCCCchHHH--HHHHHHHcCCcEEEE
Q 024338           24 VEA-PVAVVTGASRGIGRA--VATSLGKAGCKVLVN   56 (269)
Q Consensus        24 ~~~-k~vlItGas~giG~~--~a~~l~~~G~~v~i~   56 (269)
                      ++| |+|||+|+|+|.|++  ++..| ..|++.+-+
T Consensus        36 ~~GpK~VLViGaStGyGLAsRIa~aF-g~gA~TiGV   70 (78)
T PF12242_consen   36 INGPKKVLVIGASTGYGLASRIAAAF-GAGADTIGV   70 (78)
T ss_dssp             -TS-SEEEEES-SSHHHHHHHHHHHH-CC--EEEEE
T ss_pred             CCCCceEEEEecCCcccHHHHHHHHh-cCCCCEEEE
Confidence            355 999999999999999  66666 778887763

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=96.71  E-value=0.0039  Score=52.31  Aligned_cols=73  Identities=23%  Similarity=0.341  Sum_probs=51.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCccE
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDI  107 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~  107 (269)
                      ++||+|||+- |+.+++.|.++|+.|++. .++....+.+.+    .  ....+..+..|.+++.+++.+     .++|.
T Consensus         2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s-~~t~~~~~~~~~----~--g~~~v~~g~l~~~~l~~~l~~-----~~i~~   68 (256)
T TIGR00715         2 TVLLMGGTVD-SRAIAKGLIAQGIEILVT-VTTSEGKHLYPI----H--QALTVHTGALDPQELREFLKR-----HSIDI   68 (256)
T ss_pred             eEEEEechHH-HHHHHHHHHhCCCeEEEE-EccCCccccccc----c--CCceEEECCCCHHHHHHHHHh-----cCCCE
Confidence            6999999987 999999999999998885 444432222221    1  122355666677777776654     27999


Q ss_pred             EEEccC
Q 024338          108 LINNAG  113 (269)
Q Consensus       108 li~~ag  113 (269)
                      ||+.+.
T Consensus        69 VIDAtH   74 (256)
T TIGR00715        69 LVDATH   74 (256)
T ss_pred             EEEcCC
Confidence            999885

This enzyme was found to be a monomer by gel filtration.

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.70  E-value=0.014  Score=50.01  Aligned_cols=50  Identities=18%  Similarity=0.294  Sum_probs=38.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCH---HHHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSS---KEAEEVCKEIE   72 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~---~~~~~~~~~l~   72 (269)
                      .++++|+++|.|+ ||-+++++..++..|+.-+.++.|+.   ++.+++.+.+.
T Consensus       120 ~~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~  172 (288)
T PRK12749        120 FDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVN  172 (288)
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhh
Confidence            3578899999998 56699999999999976554468874   46777777664

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=96.69  E-value=0.034  Score=48.71  Aligned_cols=76  Identities=16%  Similarity=0.314  Sum_probs=49.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCc-EEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCK-VLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~-v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      ..+++++|+|+ |++|...++.+...|++ |++ +.+++++++ +++++   +.+. +  .|..+. ++.+    +.+..
T Consensus       168 ~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~-~~~~~~~~~-~a~~l---Ga~~-v--i~~~~~-~~~~----~~~~~  233 (343)
T PRK09880        168 LQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVC-ADVSPRSLS-LAREM---GADK-L--VNPQND-DLDH----YKAEK  233 (343)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEE-EeCCHHHHH-HHHHc---CCcE-E--ecCCcc-cHHH----HhccC
Confidence            46899999986 89999999888889986 555 567766654 33333   3322 2  233332 2222    22223


Q ss_pred             CCccEEEEccC
Q 024338          103 GTVDILINNAG  113 (269)
Q Consensus       103 ~~id~li~~ag  113 (269)
                      +++|++|.+.|
T Consensus       234 g~~D~vid~~G  244 (343)
T PRK09880        234 GYFDVSFEVSG  244 (343)
T ss_pred             CCCCEEEECCC
Confidence            56999999998

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=96.69  E-value=0.0034  Score=46.75  Aligned_cols=89  Identities=24%  Similarity=0.278  Sum_probs=55.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHc--------CCcEEEEEccCCCHHHHHHHHHH
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS--------GGQALTFGGDVSKEADVESMIKT   97 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~--------~~~~~~~~~Dls~~~~~~~~~~~   97 (269)
                      .-++-|+|+ |.+|.++++.|.+.|+.|..+.+|+.+..++....+...        -.+...+-.-+.| +.+..++++
T Consensus        10 ~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpD-daI~~va~~   87 (127)
T PF10727_consen   10 RLKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPD-DAIAEVAEQ   87 (127)
T ss_dssp             --EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-C-CHHHHHHHH
T ss_pred             ccEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEech-HHHHHHHHH
Confidence            356889998 799999999999999999887788877666665544211        1122333334444 478888888


Q ss_pred             HHHh--cCCccEEEEccCCCC
Q 024338           98 AVDA--WGTVDILINNAGITR  116 (269)
Q Consensus        98 ~~~~--~~~id~li~~ag~~~  116 (269)
                      +...  +.+=.+|+|+.|...
T Consensus        88 La~~~~~~~g~iVvHtSGa~~  108 (127)
T PF10727_consen   88 LAQYGAWRPGQIVVHTSGALG  108 (127)
T ss_dssp             HHCC--S-TT-EEEES-SS--
T ss_pred             HHHhccCCCCcEEEECCCCCh
Confidence            8775  333458999999654

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.67  E-value=0.011  Score=50.21  Aligned_cols=79  Identities=29%  Similarity=0.430  Sum_probs=56.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCc-EEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCK-VLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~-v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      .+.+++.++|.||. |-+++++..|++.|+. +.+ +.|+.++.+++.+.+.+.+..+.  ..++.+.+..+        
T Consensus       122 ~~~~~~~vlilGAG-GAarAv~~aL~~~g~~~i~V-~NRt~~ra~~La~~~~~~~~~~~--~~~~~~~~~~~--------  189 (283)
T COG0169         122 VDVTGKRVLILGAG-GAARAVAFALAEAGAKRITV-VNRTRERAEELADLFGELGAAVE--AAALADLEGLE--------  189 (283)
T ss_pred             cccCCCEEEEECCc-HHHHHHHHHHHHcCCCEEEE-EeCCHHHHHHHHHHhhhcccccc--ccccccccccc--------
Confidence            45578999999986 8999999999999965 555 79999999999988876543221  12222222111        


Q ss_pred             hcCCccEEEEccCCC
Q 024338          101 AWGTVDILINNAGIT  115 (269)
Q Consensus       101 ~~~~id~li~~ag~~  115 (269)
                         ..|++||+....
T Consensus       190 ---~~dliINaTp~G  201 (283)
T COG0169         190 ---EADLLINATPVG  201 (283)
T ss_pred             ---ccCEEEECCCCC
Confidence               479999997653

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.65  E-value=0.0092  Score=52.42  Aligned_cols=81  Identities=23%  Similarity=0.268  Sum_probs=51.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh-
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA-  101 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~-  101 (269)
                      .-+|+.+||.||++|+|.+.++.....|+..++. .++.+.. ++.+++   +.+   ...|..+++-    .+++++. 
T Consensus       155 ~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t-~~s~e~~-~l~k~l---GAd---~vvdy~~~~~----~e~~kk~~  222 (347)
T KOG1198|consen  155 LSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVT-ACSKEKL-ELVKKL---GAD---EVVDYKDENV----VELIKKYT  222 (347)
T ss_pred             cCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEE-EcccchH-HHHHHc---CCc---EeecCCCHHH----HHHHHhhc
Confidence            3467899999999999999999888889444442 3333322 344444   221   3346666333    3333332 


Q ss_pred             cCCccEEEEccCCC
Q 024338          102 WGTVDILINNAGIT  115 (269)
Q Consensus       102 ~~~id~li~~ag~~  115 (269)
                      .+++|+|+.|.|..
T Consensus       223 ~~~~DvVlD~vg~~  236 (347)
T KOG1198|consen  223 GKGVDVVLDCVGGS  236 (347)
T ss_pred             CCCccEEEECCCCC
Confidence            45899999999964

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=96.65  E-value=0.03  Score=48.45  Aligned_cols=79  Identities=20%  Similarity=0.317  Sum_probs=50.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      .+.+++|.|+++++|..+++.+...|++++.+ .++.++.+.+.+.+   +.. .++  |..+.+ ..+.+.+...  ++
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~-~~~~~~~~~~~~~~---g~~-~~~--~~~~~~-~~~~v~~~~~--~~  214 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGI-AGSDEKCRWLVEEL---GFD-AAI--NYKTPD-LAEALKEAAP--DG  214 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHhhc---CCc-eEE--ecCChh-HHHHHHHhcc--CC
Confidence            57899999999999999999999999998774 56665544333222   221 122  222322 2222222221  47


Q ss_pred             ccEEEEccC
Q 024338          105 VDILINNAG  113 (269)
Q Consensus       105 id~li~~ag  113 (269)
                      +|+++.+.|
T Consensus       215 ~d~vi~~~g  223 (329)
T cd05288         215 IDVYFDNVG  223 (329)
T ss_pred             ceEEEEcch
Confidence            999999886

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.64  E-value=0.012  Score=52.38  Aligned_cols=83  Identities=19%  Similarity=0.337  Sum_probs=55.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCC-------------------HHHHHHHHHHHHHcCCc--EEE
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARS-------------------SKEAEEVCKEIEASGGQ--ALT   80 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~-------------------~~~~~~~~~~l~~~~~~--~~~   80 (269)
                      ..+++++|+|.|+ ||+|..+++.|+..|..-+.+++++                   ..+.+.+.+.+++....  +..
T Consensus       131 ~~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~  209 (376)
T PRK08762        131 RRLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEA  209 (376)
T ss_pred             HHHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEE
Confidence            4577889999976 6999999999999998655555665                   34555566666655443  334


Q ss_pred             EEccCCCHHHHHHHHHHHHHhcCCccEEEEccC
Q 024338           81 FGGDVSKEADVESMIKTAVDAWGTVDILINNAG  113 (269)
Q Consensus        81 ~~~Dls~~~~~~~~~~~~~~~~~~id~li~~ag  113 (269)
                      +...+++ +.+.++++       ..|+||++..
T Consensus       210 ~~~~~~~-~~~~~~~~-------~~D~Vv~~~d  234 (376)
T PRK08762        210 VQERVTS-DNVEALLQ-------DVDVVVDGAD  234 (376)
T ss_pred             EeccCCh-HHHHHHHh-------CCCEEEECCC
Confidence            4444443 33333333       6788888774

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.63  E-value=0.019  Score=49.62  Aligned_cols=74  Identities=24%  Similarity=0.395  Sum_probs=48.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      .+++++|+|+++++|.++++.+...|++++.+ .++++..+.+ ..   .+.. .++  |.   ++..+   .+ ....+
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~-~~~~~~~~~~-~~---~~~~-~~~--~~---~~~~~---~~-~~~~~  226 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAV-TRSPEKLKIL-KE---LGAD-YVI--DG---SKFSE---DV-KKLGG  226 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEE-eCCHHHHHHH-HH---cCCc-EEE--ec---HHHHH---HH-HhccC
Confidence            57899999999999999999999999998775 5666554433 22   2221 112  21   11222   22 22347


Q ss_pred             ccEEEEccC
Q 024338          105 VDILINNAG  113 (269)
Q Consensus       105 id~li~~ag  113 (269)
                      +|++++++|
T Consensus       227 ~d~v~~~~g  235 (332)
T cd08259         227 ADVVIELVG  235 (332)
T ss_pred             CCEEEECCC
Confidence            999999987

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=96.63  E-value=0.011  Score=58.65  Aligned_cols=78  Identities=21%  Similarity=0.213  Sum_probs=60.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcC-Cc------------EEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHH
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAG-CK------------VLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEAD   90 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G-~~------------v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~   90 (269)
                      -+.|.|+|.|+ |.+|...++.|++.. +.            ++.+++++.+..+++.+..    ..+..+..|++|.++
T Consensus       567 ~~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~----~~~~~v~lDv~D~e~  641 (1042)
T PLN02819        567 KKSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGI----ENAEAVQLDVSDSES  641 (1042)
T ss_pred             ccCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhc----CCCceEEeecCCHHH
Confidence            45789999997 899999999998764 23            2334688877777666543    245678999999988


Q ss_pred             HHHHHHHHHHhcCCccEEEEccC
Q 024338           91 VESMIKTAVDAWGTVDILINNAG  113 (269)
Q Consensus        91 ~~~~~~~~~~~~~~id~li~~ag  113 (269)
                      +.++++       ++|+||++..
T Consensus       642 L~~~v~-------~~DaVIsalP  657 (1042)
T PLN02819        642 LLKYVS-------QVDVVISLLP  657 (1042)
T ss_pred             HHHhhc-------CCCEEEECCC
Confidence            877766       6899999985

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.62  E-value=0.011  Score=51.15  Aligned_cols=74  Identities=26%  Similarity=0.436  Sum_probs=53.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      ++.+++++|.|+ |.+|..+++.|...|...+.++.|+.++.+++++++   +.  ..+     +.++..+.+.      
T Consensus       175 ~l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~---g~--~~~-----~~~~~~~~l~------  237 (311)
T cd05213         175 NLKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKEL---GG--NAV-----PLDELLELLN------  237 (311)
T ss_pred             CccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc---CC--eEE-----eHHHHHHHHh------
Confidence            378999999998 899999999999988655554789988887777765   22  112     2233333332      


Q ss_pred             CCccEEEEccCC
Q 024338          103 GTVDILINNAGI  114 (269)
Q Consensus       103 ~~id~li~~ag~  114 (269)
                       ..|++|.+.+.
T Consensus       238 -~aDvVi~at~~  248 (311)
T cd05213         238 -EADVVISATGA  248 (311)
T ss_pred             -cCCEEEECCCC
Confidence             57999999874

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=96.61  E-value=0.023  Score=49.78  Aligned_cols=84  Identities=23%  Similarity=0.332  Sum_probs=54.2

Q ss_pred             ccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCH---------------------HHHHHHHHHHHHcCC--
Q 024338           20 AAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSS---------------------KEAEEVCKEIEASGG--   76 (269)
Q Consensus        20 ~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~---------------------~~~~~~~~~l~~~~~--   76 (269)
                      .-..+++++|+|.|+ ||+|..+++.|+..|..-+.+++.+.                     .+.+...+.+++...  
T Consensus        18 ~Q~~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v   96 (339)
T PRK07688         18 GQQKLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDV   96 (339)
T ss_pred             HHHHhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCc
Confidence            345678899999999 69999999999999985444355542                     233334455554433  


Q ss_pred             cEEEEEccCCCHHHHHHHHHHHHHhcCCccEEEEcc
Q 024338           77 QALTFGGDVSKEADVESMIKTAVDAWGTVDILINNA  112 (269)
Q Consensus        77 ~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~a  112 (269)
                      ++..+..|++. +.+.++++       +.|++|.+.
T Consensus        97 ~v~~~~~~~~~-~~~~~~~~-------~~DlVid~~  124 (339)
T PRK07688         97 RVEAIVQDVTA-EELEELVT-------GVDLIIDAT  124 (339)
T ss_pred             EEEEEeccCCH-HHHHHHHc-------CCCEEEEcC
Confidence            45555566653 33443332       578888774

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.61  E-value=0.025  Score=50.43  Aligned_cols=50  Identities=28%  Similarity=0.418  Sum_probs=43.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIE   72 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~   72 (269)
                      .++++|++||.|++ -+|.-+|++|+++|...+.++.|+.++..++++++.
T Consensus       174 ~~L~~~~vlvIGAG-em~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~  223 (414)
T COG0373         174 GSLKDKKVLVIGAG-EMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG  223 (414)
T ss_pred             cccccCeEEEEccc-HHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC
Confidence            34889999999986 799999999999996666658999999999998873

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.58  E-value=0.016  Score=52.53  Aligned_cols=48  Identities=27%  Similarity=0.437  Sum_probs=39.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHH
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEI   71 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l   71 (269)
                      ++.+++++|.|+ |.+|..+++.|...|+..+.+..|+.+...++.+++
T Consensus       179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~  226 (423)
T PRK00045        179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEF  226 (423)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc
Confidence            478999999987 899999999999999843443688888777776654

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=96.57  E-value=0.018  Score=49.15  Aligned_cols=79  Identities=20%  Similarity=0.344  Sum_probs=51.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      .+++++|+|+++++|..+++.+...|+++++ +.++.+..+.+ +++   +.+   ...|..+.+....+.+ ... .++
T Consensus       139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~-~~~~~~~~~~~-~~~---g~~---~~~~~~~~~~~~~~~~-~~~-~~~  208 (323)
T cd05276         139 AGETVLIHGGASGVGTAAIQLAKALGARVIA-TAGSEEKLEAC-RAL---GAD---VAINYRTEDFAEEVKE-ATG-GRG  208 (323)
T ss_pred             CCCEEEEEcCcChHHHHHHHHHHHcCCEEEE-EcCCHHHHHHH-HHc---CCC---EEEeCCchhHHHHHHH-HhC-CCC
Confidence            6789999999999999999999999999877 46666555433 322   322   1233333332233222 211 136


Q ss_pred             ccEEEEccC
Q 024338          105 VDILINNAG  113 (269)
Q Consensus       105 id~li~~ag  113 (269)
                      +|.+++++|
T Consensus       209 ~d~vi~~~g  217 (323)
T cd05276         209 VDVILDMVG  217 (323)
T ss_pred             eEEEEECCc
Confidence            999999987

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.55  E-value=0.032  Score=46.63  Aligned_cols=83  Identities=17%  Similarity=0.278  Sum_probs=53.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCH-------------------HHHHHHHHHHHHcCC--cEEE
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSS-------------------KEAEEVCKEIEASGG--QALT   80 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~-------------------~~~~~~~~~l~~~~~--~~~~   80 (269)
                      ..+++++|+|.|+ ||+|..+++.|+..|..-+.+++.+.                   .+.+.+.+.+++...  ++..
T Consensus        28 ~~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~  106 (245)
T PRK05690         28 EKLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIET  106 (245)
T ss_pred             HHhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEE
Confidence            5678899999999 89999999999999976444344321                   233444555655443  4444


Q ss_pred             EEccCCCHHHHHHHHHHHHHhcCCccEEEEccC
Q 024338           81 FGGDVSKEADVESMIKTAVDAWGTVDILINNAG  113 (269)
Q Consensus        81 ~~~Dls~~~~~~~~~~~~~~~~~~id~li~~ag  113 (269)
                      +...++. +.+.+++       ...|++|.+..
T Consensus       107 ~~~~i~~-~~~~~~~-------~~~DiVi~~~D  131 (245)
T PRK05690        107 INARLDD-DELAALI-------AGHDLVLDCTD  131 (245)
T ss_pred             EeccCCH-HHHHHHH-------hcCCEEEecCC
Confidence            5555542 3333333       36888888763

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=96.48  E-value=0.014  Score=50.72  Aligned_cols=79  Identities=24%  Similarity=0.371  Sum_probs=50.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      .|.++||+|+++++|..+++.....|++|+.+ .+++++.+.+ .++   +.+. ++  |-.+.+...+.+.+...  ++
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~-~~s~~~~~~~-~~l---Ga~~-vi--~~~~~~~~~~~~~~~~~--~g  207 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGA-AGSDEKVAYL-KKL---GFDV-AF--NYKTVKSLEETLKKASP--DG  207 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEE-eCCHHHHHHH-HHc---CCCE-EE--eccccccHHHHHHHhCC--CC
Confidence            57999999999999999998888899998774 5565554433 333   3322 22  22222233333333321  36


Q ss_pred             ccEEEEccC
Q 024338          105 VDILINNAG  113 (269)
Q Consensus       105 id~li~~ag  113 (269)
                      +|+++.+.|
T Consensus       208 vdvv~d~~G  216 (325)
T TIGR02825       208 YDCYFDNVG  216 (325)
T ss_pred             eEEEEECCC
Confidence            999999887

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.43  E-value=0.0069  Score=47.99  Aligned_cols=46  Identities=28%  Similarity=0.336  Sum_probs=35.9

Q ss_pred             cccccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHH
Q 024338           17 TNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEA   64 (269)
Q Consensus        17 ~~~~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~   64 (269)
                      ......++.||++.|.|. |.||+++|+.+...|++|+.. +|.....
T Consensus        27 ~~~~~~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~-d~~~~~~   72 (178)
T PF02826_consen   27 ERFPGRELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGY-DRSPKPE   72 (178)
T ss_dssp             TTTTBS-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEE-ESSCHHH
T ss_pred             cCCCccccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEe-cccCChh
Confidence            344557899999999987 699999999999999999984 6665443

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=96.42  E-value=0.045  Score=49.17  Aligned_cols=51  Identities=27%  Similarity=0.348  Sum_probs=39.7

Q ss_pred             hhhhcccccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHH
Q 024338           13 IEQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAE   65 (269)
Q Consensus        13 ~~~~~~~~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~   65 (269)
                      ++..-..+...+.|++++|.|+. .||+.+++.+...|++|++ +.+++.+++
T Consensus       189 ~~~i~r~t~~~l~GktVvViG~G-~IG~~va~~ak~~Ga~ViV-~d~d~~R~~  239 (413)
T cd00401         189 IDGIKRATDVMIAGKVAVVAGYG-DVGKGCAQSLRGQGARVIV-TEVDPICAL  239 (413)
T ss_pred             HHHHHHhcCCCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEE-EECChhhHH
Confidence            34444444456789999999987 8999999999999999887 577766554

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=96.42  E-value=0.021  Score=48.39  Aligned_cols=107  Identities=21%  Similarity=0.280  Sum_probs=67.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC-
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG-  103 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~-  103 (269)
                      .|+|++|++|+|.+|.-+.+----+|++|+.+ .-.+++.+-+.+++   +.+.   -.|-..+    .+.+.+.+..+ 
T Consensus       150 ~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGi-aGg~eK~~~l~~~l---GfD~---~idyk~~----d~~~~L~~a~P~  218 (340)
T COG2130         150 AGETVVVSAAAGAVGSVVGQIAKLKGCRVVGI-AGGAEKCDFLTEEL---GFDA---GIDYKAE----DFAQALKEACPK  218 (340)
T ss_pred             CCCEEEEEecccccchHHHHHHHhhCCeEEEe-cCCHHHHHHHHHhc---CCce---eeecCcc----cHHHHHHHHCCC
Confidence            58999999999999954444434569999985 55555554444434   2211   1133332    34445555555 


Q ss_pred             CccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCC
Q 024338          104 TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGN  170 (269)
Q Consensus       104 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~  170 (269)
                      .||+.+-|.|...                          ..++++.|  +..+||+..+-++.+...
T Consensus       219 GIDvyfeNVGg~v--------------------------~DAv~~~l--n~~aRi~~CG~IS~YN~~  257 (340)
T COG2130         219 GIDVYFENVGGEV--------------------------LDAVLPLL--NLFARIPVCGAISQYNAP  257 (340)
T ss_pred             CeEEEEEcCCchH--------------------------HHHHHHhh--ccccceeeeeehhhcCCC
Confidence            6999999998421                          34456666  567899988777766543

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=96.41  E-value=0.043  Score=45.29  Aligned_cols=84  Identities=19%  Similarity=0.321  Sum_probs=55.6

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCC-------------------HHHHHHHHHHHHHcCC--cEE
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARS-------------------SKEAEEVCKEIEASGG--QAL   79 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~-------------------~~~~~~~~~~l~~~~~--~~~   79 (269)
                      ...+++++|+|.|+ ||+|.++++.|+..|..-+.+++.+                   ..+.+.+.+.+++...  ++.
T Consensus        16 q~~L~~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~   94 (228)
T cd00757          16 QEKLKNARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIE   94 (228)
T ss_pred             HHHHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEE
Confidence            34677899999995 5999999999999998755544322                   2344556666666544  455


Q ss_pred             EEEccCCCHHHHHHHHHHHHHhcCCccEEEEccC
Q 024338           80 TFGGDVSKEADVESMIKTAVDAWGTVDILINNAG  113 (269)
Q Consensus        80 ~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~ag  113 (269)
                      .+..+++ .+.+.++++       ..|++|.+..
T Consensus        95 ~~~~~i~-~~~~~~~~~-------~~DvVi~~~d  120 (228)
T cd00757          95 AYNERLD-AENAEELIA-------GYDLVLDCTD  120 (228)
T ss_pred             EecceeC-HHHHHHHHh-------CCCEEEEcCC
Confidence            5555553 333444333       6899998875

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PLN00203 glutamyl-tRNA reductase

Probab=96.41  E-value=0.025  Score=52.36  Aligned_cols=76  Identities=16%  Similarity=0.298  Sum_probs=52.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCc-EEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCK-VLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~-v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      ++.+++++|.|+ |.+|..+++.|..+|+. +++ +.|+.+..+.+.+++.  +..+.+     ...++...++      
T Consensus       263 ~l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V-~nRs~era~~La~~~~--g~~i~~-----~~~~dl~~al------  327 (519)
T PLN00203        263 SHASARVLVIGA-GKMGKLLVKHLVSKGCTKMVV-VNRSEERVAALREEFP--DVEIIY-----KPLDEMLACA------  327 (519)
T ss_pred             CCCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEE-EeCCHHHHHHHHHHhC--CCceEe-----ecHhhHHHHH------
Confidence            378999999999 89999999999999975 555 6899888887776652  111211     1122233333      


Q ss_pred             cCCccEEEEccCC
Q 024338          102 WGTVDILINNAGI  114 (269)
Q Consensus       102 ~~~id~li~~ag~  114 (269)
                       ...|+||.+.+.
T Consensus       328 -~~aDVVIsAT~s  339 (519)
T PLN00203        328 -AEADVVFTSTSS  339 (519)
T ss_pred             -hcCCEEEEccCC
Confidence             267888887653

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=96.40  E-value=0.051  Score=48.99  Aligned_cols=42  Identities=26%  Similarity=0.336  Sum_probs=35.0

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEA   64 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~   64 (269)
                      ...+.||+++|.|. |.||+.+++.+...|++|++ +.+++.+.
T Consensus       207 ~~~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV-~d~dp~ra  248 (425)
T PRK05476        207 NVLIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIV-TEVDPICA  248 (425)
T ss_pred             cCCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEE-EcCCchhh
Confidence            34578999999997 68999999999999999887 56766543

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.36  E-value=0.18  Score=41.99  Aligned_cols=98  Identities=19%  Similarity=0.196  Sum_probs=63.7

Q ss_pred             chhhhhhhhhhhcccccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEcc
Q 024338            5 GIRAQVATIEQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGD   84 (269)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~D   84 (269)
                      .+.-|.+|.-.+..+..+.-.|.+|||--|.||+|..+++.+-..|++++.+. ...++.+...    +.+..   +..|
T Consensus       126 a~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~a-sTaeK~~~ak----enG~~---h~I~  197 (336)
T KOG1197|consen  126 ALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATA-STAEKHEIAK----ENGAE---HPID  197 (336)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCcEEEEEe-ccHHHHHHHH----hcCCc---ceee
Confidence            34445555555555555666799999999999999999999999999998854 4444443322    22322   2234


Q ss_pred             CCCHHHHHHHHHHHHHhc-C-CccEEEEccCC
Q 024338           85 VSKEADVESMIKTAVDAW-G-TVDILINNAGI  114 (269)
Q Consensus        85 ls~~~~~~~~~~~~~~~~-~-~id~li~~ag~  114 (269)
                      -+.++    +++++.+.. | ++|.++...|.
T Consensus       198 y~~eD----~v~~V~kiTngKGVd~vyDsvG~  225 (336)
T KOG1197|consen  198 YSTED----YVDEVKKITNGKGVDAVYDSVGK  225 (336)
T ss_pred             ccchh----HHHHHHhccCCCCceeeeccccc
Confidence            44433    344444433 3 59999888875

>PRK08655 prephenate dehydrogenase; Provisional

Probab=96.35  E-value=0.087  Score=47.91  Aligned_cols=41  Identities=32%  Similarity=0.509  Sum_probs=33.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHH
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCK   69 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~   69 (269)
                      ++.|+||.|.+|.++++.|.++|.+|.+ ..|+++...+...
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v-~~r~~~~~~~~a~   42 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIV-TGRDPKKGKEVAK   42 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEE-EECChHHHHHHHH
Confidence            5899999999999999999999999887 4777765544443

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=96.35  E-value=0.043  Score=44.79  Aligned_cols=83  Identities=14%  Similarity=0.269  Sum_probs=52.6

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCH------------------HHHHHHHHHHHHcC--CcEEE
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSS------------------KEAEEVCKEIEASG--GQALT   80 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~------------------~~~~~~~~~l~~~~--~~~~~   80 (269)
                      ...+++++|+|.|+ ||+|..+++.|+..|..-+.+.+.+.                  .+.+.+.+.+++..  .++..
T Consensus        23 q~~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~  101 (212)
T PRK08644         23 LEKLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEA  101 (212)
T ss_pred             HHHHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEE
Confidence            35678899999996 69999999999999987444445541                  23344455555433  34444


Q ss_pred             EEccCCCHHHHHHHHHHHHHhcCCccEEEEcc
Q 024338           81 FGGDVSKEADVESMIKTAVDAWGTVDILINNA  112 (269)
Q Consensus        81 ~~~Dls~~~~~~~~~~~~~~~~~~id~li~~a  112 (269)
                      +...+++ +.+.+++       .+.|++|.+.
T Consensus       102 ~~~~i~~-~~~~~~~-------~~~DvVI~a~  125 (212)
T PRK08644        102 HNEKIDE-DNIEELF-------KDCDIVVEAF  125 (212)
T ss_pred             EeeecCH-HHHHHHH-------cCCCEEEECC
Confidence            5555553 2233333       3678888774

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.34  E-value=0.028  Score=50.82  Aligned_cols=73  Identities=30%  Similarity=0.508  Sum_probs=50.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcC-CcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAG-CKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G-~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      ++.+++++|.|+ |.+|..+++.|...| .++++ ..|+.+..+++.+.+.   ..  .+.     .++..+.+.     
T Consensus       177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v-~~rs~~ra~~la~~~g---~~--~i~-----~~~l~~~l~-----  239 (417)
T TIGR01035       177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILI-ANRTYERAEDLAKELG---GE--AVK-----FEDLEEYLA-----  239 (417)
T ss_pred             CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEE-EeCCHHHHHHHHHHcC---Ce--Eee-----HHHHHHHHh-----
Confidence            578999999997 899999999999999 55655 6888877766666542   11  121     123333332     


Q ss_pred             cCCccEEEEccCC
Q 024338          102 WGTVDILINNAGI  114 (269)
Q Consensus       102 ~~~id~li~~ag~  114 (269)
                        ..|++|.+.+.
T Consensus       240 --~aDvVi~aT~s  250 (417)
T TIGR01035       240 --EADIVISSTGA  250 (417)
T ss_pred             --hCCEEEECCCC
Confidence              57888888764

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.31  E-value=0.033  Score=50.72  Aligned_cols=81  Identities=22%  Similarity=0.270  Sum_probs=51.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      |++.+|+++|+|.+ +.|.++|+.|+++|+.|.+........   ..++++.....+.++..+..+ .    ..      
T Consensus         1 ~~~~~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~~~---~~~~l~~~~~gi~~~~g~~~~-~----~~------   65 (445)
T PRK04308          1 MTFQNKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELKPE---RVAQIGKMFDGLVFYTGRLKD-A----LD------   65 (445)
T ss_pred             CCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCch---hHHHHhhccCCcEEEeCCCCH-H----HH------
Confidence            34678999999986 999999999999999988853332221   122333221234444333221 1    11      


Q ss_pred             cCCccEEEEccCCCCCC
Q 024338          102 WGTVDILINNAGITRDT  118 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~  118 (269)
                       ...|.||..+|+....
T Consensus        66 -~~~d~vv~spgi~~~~   81 (445)
T PRK04308         66 -NGFDILALSPGISERQ   81 (445)
T ss_pred             -hCCCEEEECCCCCCCC
Confidence             2689999999987543

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=96.30  E-value=0.096  Score=45.99  Aligned_cols=40  Identities=20%  Similarity=0.354  Sum_probs=33.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHH
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAE   65 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~   65 (269)
                      -.|++++|.|+ +++|..++......|+++++ +.+++++++
T Consensus       165 ~~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~-~~~~~~~~~  204 (349)
T TIGR03201       165 KKGDLVIVIGA-GGVGGYMVQTAKAMGAAVVA-IDIDPEKLE  204 (349)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCeEEE-EcCCHHHHH
Confidence            35899999999 99999999999899998776 466766654

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.28  E-value=0.045  Score=48.36  Aligned_cols=39  Identities=23%  Similarity=0.266  Sum_probs=31.8

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCC
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARS   60 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~   60 (269)
                      ...+++++|+|.|+ ||+|..+++.|+..|..-+.+++.+
T Consensus        23 q~~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D   61 (355)
T PRK05597         23 QQSLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDD   61 (355)
T ss_pred             HHHHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            45678899999998 6999999999999997755544543

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=96.28  E-value=0.059  Score=40.48  Aligned_cols=79  Identities=20%  Similarity=0.376  Sum_probs=54.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCC-------------------HHHHHHHHHHHHHc--CCcEEEEEcc
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARS-------------------SKEAEEVCKEIEAS--GGQALTFGGD   84 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~-------------------~~~~~~~~~~l~~~--~~~~~~~~~D   84 (269)
                      +++++|.|++ ++|.++++.|+..|..-+.+++.+                   ..+.+.+.+.+++.  ..++..+..+
T Consensus         2 ~~~v~iiG~G-~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~   80 (135)
T PF00899_consen    2 NKRVLIIGAG-GVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK   80 (135)
T ss_dssp             T-EEEEESTS-HHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred             CCEEEEECcC-HHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence            5789999876 999999999999998644433331                   12455666667665  4567777777


Q ss_pred             CCCHHHHHHHHHHHHHhcCCccEEEEccC
Q 024338           85 VSKEADVESMIKTAVDAWGTVDILINNAG  113 (269)
Q Consensus        85 ls~~~~~~~~~~~~~~~~~~id~li~~ag  113 (269)
                      + +.+...++++       ..|++|.+..
T Consensus        81 ~-~~~~~~~~~~-------~~d~vi~~~d  101 (135)
T PF00899_consen   81 I-DEENIEELLK-------DYDIVIDCVD  101 (135)
T ss_dssp             C-SHHHHHHHHH-------TSSEEEEESS
T ss_pred             c-cccccccccc-------CCCEEEEecC
Confidence            7 3455555553       7799998764

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK07574 formate dehydrogenase; Provisional

Probab=96.25  E-value=0.34  Score=43.21  Aligned_cols=39  Identities=26%  Similarity=0.248  Sum_probs=33.2

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSS   61 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~   61 (269)
                      ..+++||++.|.|. |.||+.+|+.|...|++|+. ..|..
T Consensus       187 ~~~L~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~-~dr~~  225 (385)
T PRK07574        187 SYDLEGMTVGIVGA-GRIGLAVLRRLKPFDVKLHY-TDRHR  225 (385)
T ss_pred             ceecCCCEEEEECC-CHHHHHHHHHHHhCCCEEEE-ECCCC
Confidence            35689999999998 57999999999999999988 46554

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.24  E-value=0.018  Score=49.13  Aligned_cols=38  Identities=26%  Similarity=0.288  Sum_probs=33.4

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecC
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYAR   59 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r   59 (269)
                      ..+++||.++|.|+++-.|+.++..|.++|+.|.+ +.|
T Consensus       154 ~i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv-~~~  191 (283)
T PRK14192        154 NIELAGKHAVVVGRSAILGKPMAMMLLNANATVTI-CHS  191 (283)
T ss_pred             CCCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEE-EeC
Confidence            34789999999999988999999999999998777 455

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.17  E-value=0.033  Score=48.12  Aligned_cols=78  Identities=29%  Similarity=0.438  Sum_probs=49.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      .|.++||+||++++|..+++.....|++++.+ .+++++.+.+ +++   +.+. ++  |-.+.+ ..+.+.+...  ++
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~-~~s~~~~~~l-~~~---Ga~~-vi--~~~~~~-~~~~v~~~~~--~g  211 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGC-AGSDDKVAWL-KEL---GFDA-VF--NYKTVS-LEEALKEAAP--DG  211 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEE-eCCHHHHHHH-HHc---CCCE-EE--eCCCcc-HHHHHHHHCC--CC
Confidence            57999999999999999998888899998774 5565554433 222   3321 22  322222 2222222221  36


Q ss_pred             ccEEEEccC
Q 024338          105 VDILINNAG  113 (269)
Q Consensus       105 id~li~~ag  113 (269)
                      +|+++.+.|
T Consensus       212 vd~vld~~g  220 (329)
T cd08294         212 IDCYFDNVG  220 (329)
T ss_pred             cEEEEECCC
Confidence            999998887

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.16  E-value=0.029  Score=51.12  Aligned_cols=72  Identities=18%  Similarity=0.175  Sum_probs=49.1

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCccE
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDI  107 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~  107 (269)
                      .++|.|+ |.+|+++++.|.++|..+++ ..++++..+.+.+.     ..+.++.+|.++...++++-      ..+.|.
T Consensus         2 ~viIiG~-G~ig~~~a~~L~~~g~~v~v-id~~~~~~~~~~~~-----~~~~~~~gd~~~~~~l~~~~------~~~a~~   68 (453)
T PRK09496          2 KIIIVGA-GQVGYTLAENLSGENNDVTV-IDTDEERLRRLQDR-----LDVRTVVGNGSSPDVLREAG------AEDADL   68 (453)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCcEEE-EECCHHHHHHHHhh-----cCEEEEEeCCCCHHHHHHcC------CCcCCE
Confidence            5788887 89999999999999999887 57887766554431     23556667777655444430      124565


Q ss_pred             EEEcc
Q 024338          108 LINNA  112 (269)
Q Consensus       108 li~~a  112 (269)
                      +|.+.
T Consensus        69 vi~~~   73 (453)
T PRK09496         69 LIAVT   73 (453)
T ss_pred             EEEec
Confidence            55544

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=96.16  E-value=0.055  Score=44.15  Aligned_cols=203  Identities=15%  Similarity=0.040  Sum_probs=118.3

Q ss_pred             cccccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHH
Q 024338           17 TNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIK   96 (269)
Q Consensus        17 ~~~~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~   96 (269)
                      +.+.+.+++-.+.++.|+.+..|.++++.-...|..|.++ .|+..  .++.+   .+...+..++.|.-...-.+... 
T Consensus        43 kid~~~dve~e~tlvlggnpfsgs~vlk~A~~vv~svgil-sen~~--k~~l~---sw~~~vswh~gnsfssn~~k~~l-  115 (283)
T KOG4288|consen   43 KIDDKQDVEVEWTLVLGGNPFSGSEVLKNATNVVHSVGIL-SENEN--KQTLS---SWPTYVSWHRGNSFSSNPNKLKL-  115 (283)
T ss_pred             CCcchhhhhHHHHhhhcCCCcchHHHHHHHHhhceeeeEe-ecccC--cchhh---CCCcccchhhccccccCcchhhh-
Confidence            3444556666788999999999999999999999999885 55543  22222   33445555555554322122211 


Q ss_pred             HHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhh
Q 024338           97 TAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANY  176 (269)
Q Consensus        97 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y  176 (269)
                            .++..++-++|....          ...+...|=.......++..    +.+..++++||....-.+.--...|
T Consensus       116 ------~g~t~v~e~~ggfgn----------~~~m~~ing~ani~a~kaa~----~~gv~~fvyISa~d~~~~~~i~rGY  175 (283)
T KOG4288|consen  116 ------SGPTFVYEMMGGFGN----------IILMDRINGTANINAVKAAA----KAGVPRFVYISAHDFGLPPLIPRGY  175 (283)
T ss_pred             ------cCCcccHHHhcCccc----------hHHHHHhccHhhHHHHHHHH----HcCCceEEEEEhhhcCCCCccchhh
Confidence                  256666666664322          22333444444444455554    3567899999876553332222368


Q ss_pred             HHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccc--cc-----ChHHHHHHHhc-------CC-----CCCCCCH
Q 024338          177 SAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTA--KL-----GEDLEKKILEK-------IP-----LGRYGQP  237 (269)
Q Consensus       177 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~--~~-----~~~~~~~~~~~-------~~-----~~~~~~~  237 (269)
                      =-+|.+.+.=      -+...+.|-..+.||++.....-  ..     .....+...+.       +|     +....+.
T Consensus       176 ~~gKR~AE~E------ll~~~~~rgiilRPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnv  249 (283)
T KOG4288|consen  176 IEGKREAEAE------LLKKFRFRGIILRPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNV  249 (283)
T ss_pred             hccchHHHHH------HHHhcCCCceeeccceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCcccccccCCCcCH
Confidence            8888865432      12334577788999999865210  00     01122222221       11     1234578


Q ss_pred             HHHHHHHHHhccCCC
Q 024338          238 EEVAGLVEFLALNPA  252 (269)
Q Consensus       238 ~~~a~~~~~l~~~~~  252 (269)
                      +++|.+++..+.+|+
T Consensus       250 e~VA~aal~ai~dp~  264 (283)
T KOG4288|consen  250 ESVALAALKAIEDPD  264 (283)
T ss_pred             HHHHHHHHHhccCCC
Confidence            999999999997664

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=96.13  E-value=0.1  Score=46.49  Aligned_cols=114  Identities=18%  Similarity=0.128  Sum_probs=69.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-c-----EEEEe--cCCHHHHHHHHHHHHHcC----CcEEEEEccCCCHHHHHHH
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGC-K-----VLVNY--ARSSKEAEEVCKEIEASG----GQALTFGGDVSKEADVESM   94 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~-~-----v~i~~--~r~~~~~~~~~~~l~~~~----~~~~~~~~Dls~~~~~~~~   94 (269)
                      -.|.|+|++|.+|.++|..++..|. .     ++.+.  +++.+.++...-++....    .++.+. .  .+       
T Consensus        45 ~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~-~--~~-------  114 (387)
T TIGR01757        45 VNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIG-I--DP-------  114 (387)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEe-c--CC-------
Confidence            4799999999999999999998873 3     33333  677777666555554422    111111 1  11       


Q ss_pred             HHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-C-CCCeEEEEcCC
Q 024338           95 IKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMK-K-KKGRIINIASV  164 (269)
Q Consensus        95 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~-~~~~iv~isS~  164 (269)
                          -+.+...|++|..||.... +     .+.-.+.++.|..-    .+.+.+.+.+ . +.+.+|++|-.
T Consensus       115 ----y~~~kdaDIVVitAG~prk-p-----g~tR~dll~~N~~I----~k~i~~~I~~~a~~~~iviVVsNP  172 (387)
T TIGR01757       115 ----YEVFEDADWALLIGAKPRG-P-----GMERADLLDINGQI----FADQGKALNAVASKNCKVLVVGNP  172 (387)
T ss_pred             ----HHHhCCCCEEEECCCCCCC-C-----CCCHHHHHHHHHHH----HHHHHHHHHHhCCCCeEEEEcCCc
Confidence                1122378999999997432 1     12334566666654    5555555544 3 56778877753

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=96.12  E-value=0.086  Score=44.76  Aligned_cols=77  Identities=19%  Similarity=0.233  Sum_probs=46.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCc-EEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCK-VLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~-v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      ..+++++|.|+ +++|..+++.+...|+. |++ +.+++++.+ +++++   +.+. ++  |..+   ..+.+.++.. -
T Consensus       119 ~~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~-~~~~~~r~~-~a~~~---Ga~~-~i--~~~~---~~~~~~~~~~-~  185 (280)
T TIGR03366       119 LKGRRVLVVGA-GMLGLTAAAAAAAAGAARVVA-ADPSPDRRE-LALSF---GATA-LA--EPEV---LAERQGGLQN-G  185 (280)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEE-ECCCHHHHH-HHHHc---CCcE-ec--Cchh---hHHHHHHHhC-C
Confidence            36899999987 79999999988889998 555 466665553 33333   3321 11  2221   1222222211 1


Q ss_pred             CCccEEEEccC
Q 024338          103 GTVDILINNAG  113 (269)
Q Consensus       103 ~~id~li~~ag  113 (269)
                      ..+|++|.+.|
T Consensus       186 ~g~d~vid~~G  196 (280)
T TIGR03366       186 RGVDVALEFSG  196 (280)
T ss_pred             CCCCEEEECCC
Confidence            25999999887

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=96.10  E-value=0.038  Score=45.51  Aligned_cols=74  Identities=24%  Similarity=0.368  Sum_probs=53.4

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCccE
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDI  107 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~  107 (269)
                      .++|.|++ -+|..+|+.|.+.|++|++ ..++++..++..++-    -....+.+|-+|++-++++=-      ...|+
T Consensus         2 ~iiIiG~G-~vG~~va~~L~~~g~~Vv~-Id~d~~~~~~~~~~~----~~~~~v~gd~t~~~~L~~agi------~~aD~   69 (225)
T COG0569           2 KIIIIGAG-RVGRSVARELSEEGHNVVL-IDRDEERVEEFLADE----LDTHVVIGDATDEDVLEEAGI------DDADA   69 (225)
T ss_pred             EEEEECCc-HHHHHHHHHHHhCCCceEE-EEcCHHHHHHHhhhh----cceEEEEecCCCHHHHHhcCC------CcCCE
Confidence            46666665 8999999999999999998 588888776644321    256778889998776655411      26777


Q ss_pred             EEEccC
Q 024338          108 LINNAG  113 (269)
Q Consensus       108 li~~ag  113 (269)
                      +|-..|
T Consensus        70 vva~t~   75 (225)
T COG0569          70 VVAATG   75 (225)
T ss_pred             EEEeeC
Confidence            776665

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.08  E-value=0.017  Score=45.23  Aligned_cols=38  Identities=24%  Similarity=0.278  Sum_probs=33.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCC
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARS   60 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~   60 (269)
                      .+++||+++|.|++.-+|..+++.|.++|++|.+ +.|+
T Consensus        40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v-~~r~   77 (168)
T cd01080          40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTV-CHSK   77 (168)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEE-EECC
Confidence            5799999999999766899999999999998777 4555

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.07  E-value=0.051  Score=46.52  Aligned_cols=74  Identities=23%  Similarity=0.290  Sum_probs=48.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCC-CHHHHHHHHHHHHHhcC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVS-KEADVESMIKTAVDAWG  103 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls-~~~~~~~~~~~~~~~~~  103 (269)
                      .||++-|+|+.| ||.--++.--+.|++|+++ +++..+.++..+.|   +.+.+   .|.+ |.+.++++.+       
T Consensus       181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vi-s~~~~kkeea~~~L---GAd~f---v~~~~d~d~~~~~~~-------  245 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVI-STSSKKKEEAIKSL---GADVF---VDSTEDPDIMKAIMK-------  245 (360)
T ss_pred             CCcEEEEecCcc-cchHHHHHHHHhCcEEEEE-eCCchhHHHHHHhc---Cccee---EEecCCHHHHHHHHH-------
Confidence            799999999998 9954444444669999994 67665565555554   44433   3556 6666666655       


Q ss_pred             CccEEEEccC
Q 024338          104 TVDILINNAG  113 (269)
Q Consensus       104 ~id~li~~ag  113 (269)
                      ..|++++++.
T Consensus       246 ~~dg~~~~v~  255 (360)
T KOG0023|consen  246 TTDGGIDTVS  255 (360)
T ss_pred             hhcCcceeee
Confidence            3455555543

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=96.06  E-value=0.045  Score=46.20  Aligned_cols=116  Identities=20%  Similarity=0.263  Sum_probs=66.1

Q ss_pred             EEEeCCCCchHHHHHHHHHHcC----CcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           29 AVVTGASRGIGRAVATSLGKAG----CKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        29 vlItGas~giG~~~a~~l~~~G----~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      +.|+|++|.+|..++..|+..|    .++++ .+.+++.++....+++......  ....++-..+..+.+       ..
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L-~D~~~~~l~~~~~dl~~~~~~~--~~~~i~~~~d~~~~~-------~~   70 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVL-YDIDEEKLKGVAMDLQDAVEPL--ADIKVSITDDPYEAF-------KD   70 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEE-EeCCcccchHHHHHHHHhhhhc--cCcEEEECCchHHHh-------CC
Confidence            4699998899999999999998    56666 5777776666666664432111  011111111122222       37


Q ss_pred             ccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-CCCCeEEEEcCC
Q 024338          105 VDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMK-KKKGRIINIASV  164 (269)
Q Consensus       105 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~iv~isS~  164 (269)
                      .|++|..+|.....   ..+   -......|..-    .+.+.+.+.+ .+++.++++|--
T Consensus        71 aDiVv~t~~~~~~~---g~~---r~~~~~~n~~i----~~~i~~~i~~~~p~a~~i~~tNP  121 (263)
T cd00650          71 ADVVIITAGVGRKP---GMG---RLDLLKRNVPI----VKEIGDNIEKYSPDAWIIVVSNP  121 (263)
T ss_pred             CCEEEECCCCCCCc---CCC---HHHHHHHHHHH----HHHHHHHHHHHCCCeEEEEecCc
Confidence            89999999864332   112   12233333333    4444554433 456777777643

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=96.03  E-value=0.1  Score=45.52  Aligned_cols=78  Identities=18%  Similarity=0.226  Sum_probs=49.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCc-EEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCK-VLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~-v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      ..|++++|+|+ |++|..++..+...|++ |++ +.+++++.+. ++++   +.+. +  .|..+.+ .+++. ++.. .
T Consensus       162 ~~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~-~~~~~~~~~~-~~~~---ga~~-~--i~~~~~~-~~~~~-~~~~-~  229 (339)
T cd08239         162 SGRDTVLVVGA-GPVGLGALMLARALGAEDVIG-VDPSPERLEL-AKAL---GADF-V--INSGQDD-VQEIR-ELTS-G  229 (339)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEE-ECCCHHHHHH-HHHh---CCCE-E--EcCCcch-HHHHH-HHhC-C
Confidence            35899999986 89999999999899999 766 4666665543 3433   3221 1  2333332 22222 2211 1


Q ss_pred             CCccEEEEccC
Q 024338          103 GTVDILINNAG  113 (269)
Q Consensus       103 ~~id~li~~ag  113 (269)
                      .++|++|.+.|
T Consensus       230 ~~~d~vid~~g  240 (339)
T cd08239         230 AGADVAIECSG  240 (339)
T ss_pred             CCCCEEEECCC
Confidence            26999999987

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=95.99  E-value=0.019  Score=52.70  Aligned_cols=48  Identities=27%  Similarity=0.523  Sum_probs=39.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEI   71 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l   71 (269)
                      .++++|+++|+|+ ||+|++++..|++.|+++.+ ..|+.++.+++.+++
T Consensus       328 ~~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i-~~R~~~~~~~la~~~  375 (477)
T PRK09310        328 IPLNNQHVAIVGA-GGAAKAIATTLARAGAELLI-FNRTKAHAEALASRC  375 (477)
T ss_pred             CCcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHh
Confidence            3567899999996 79999999999999998777 588887777666543

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=95.88  E-value=0.14  Score=44.88  Aligned_cols=41  Identities=20%  Similarity=0.191  Sum_probs=32.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHH
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEE   66 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~   66 (269)
                      .+++++|+|+ +++|..+++.....|+++++.+.+++++.+.
T Consensus       160 ~g~~vlV~G~-g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~  200 (347)
T PRK10309        160 EGKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDINSEKLAL  200 (347)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHH
Confidence            5799999975 8999999998889999854445677766553

>PLN02494 adenosylhomocysteinase

Probab=95.88  E-value=0.097  Score=47.61  Aligned_cols=50  Identities=20%  Similarity=0.296  Sum_probs=39.3

Q ss_pred             hhhhhcccccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHH
Q 024338           12 TIEQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKE   63 (269)
Q Consensus        12 ~~~~~~~~~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~   63 (269)
                      +++.+-..+...+.||+++|.|.. .||+.+|+.+...|++|++ +.+++..
T Consensus       240 ~~d~i~r~t~i~LaGKtVvViGyG-~IGr~vA~~aka~Ga~VIV-~e~dp~r  289 (477)
T PLN02494        240 LPDGLMRATDVMIAGKVAVICGYG-DVGKGCAAAMKAAGARVIV-TEIDPIC  289 (477)
T ss_pred             HHHHHHHhcCCccCCCEEEEECCC-HHHHHHHHHHHHCCCEEEE-EeCCchh
Confidence            344454444556899999999987 9999999999999999887 5666644

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=95.85  E-value=0.14  Score=46.49  Aligned_cols=113  Identities=18%  Similarity=0.137  Sum_probs=71.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHc-------CC--cEEEEecCCHHHHHHHHHHHHHcC----CcEEEEEccCCCHHHHHH
Q 024338           27 PVAVVTGASRGIGRAVATSLGKA-------GC--KVLVNYARSSKEAEEVCKEIEASG----GQALTFGGDVSKEADVES   93 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~-------G~--~v~i~~~r~~~~~~~~~~~l~~~~----~~~~~~~~Dls~~~~~~~   93 (269)
                      -.|.|+|++|.+|.+++..++..       |.  ++++ ..++++.++...-++....    .++.+. .  .+.     
T Consensus       101 ~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvl-iD~~~~~a~G~amDL~daa~~~~~~v~i~-~--~~y-----  171 (444)
T PLN00112        101 INVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLG-SERSKQALEGVAMELEDSLYPLLREVSIG-I--DPY-----  171 (444)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEE-EcCCcchhHHHHHHHHHhhhhhcCceEEe-c--CCH-----
Confidence            46899999999999999999988       53  3444 6888887776666665432    112111 1  111     


Q ss_pred             HHHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--CCCCeEEEEcCC
Q 024338           94 MIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMK--KKKGRIINIASV  164 (269)
Q Consensus        94 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~--~~~~~iv~isS~  164 (269)
                            +.+...|++|..||.... +     ..+-.+.++.|..-    .+.+.+.+.+  .+++.+|++|--
T Consensus       172 ------e~~kdaDiVVitAG~prk-p-----G~tR~dLl~~N~~I----~k~i~~~I~~~a~p~~ivIVVsNP  228 (444)
T PLN00112        172 ------EVFQDAEWALLIGAKPRG-P-----GMERADLLDINGQI----FAEQGKALNEVASRNVKVIVVGNP  228 (444)
T ss_pred             ------HHhCcCCEEEECCCCCCC-C-----CCCHHHHHHHHHHH----HHHHHHHHHHhcCCCeEEEEcCCc
Confidence                  122378999999997432 1     12344566666654    5666666654  467778887754

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=95.84  E-value=0.1  Score=42.28  Aligned_cols=37  Identities=19%  Similarity=0.258  Sum_probs=32.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCC
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARS   60 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~   60 (269)
                      .+++||.+||.|| |.+|...++.|.+.|++|+++ .++
T Consensus         6 l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VI-s~~   42 (202)
T PRK06718          6 IDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVI-SPE   42 (202)
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEE-cCC
Confidence            4789999999999 699999999999999998885 443

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=95.82  E-value=0.081  Score=46.90  Aligned_cols=78  Identities=19%  Similarity=0.290  Sum_probs=47.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCc-EEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCK-VLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~-v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      .+++++|+|+ +++|..++..+...|+. |++ +.+++++++ +++++   +.+.   ..|..+.+ ..+.+.++..  +
T Consensus       191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~-~~~~~~r~~-~a~~~---Ga~~---~i~~~~~~-~~~~i~~~~~--~  258 (371)
T cd08281         191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVA-VDLNEDKLA-LAREL---GATA---TVNAGDPN-AVEQVRELTG--G  258 (371)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEE-EcCCHHHHH-HHHHc---CCce---EeCCCchh-HHHHHHHHhC--C
Confidence            5789999985 89999998888889995 655 466666554 33333   3321   12333322 2222222221  3


Q ss_pred             CccEEEEccCC
Q 024338          104 TVDILINNAGI  114 (269)
Q Consensus       104 ~id~li~~ag~  114 (269)
                      ++|++|.+.|.
T Consensus       259 g~d~vid~~G~  269 (371)
T cd08281         259 GVDYAFEMAGS  269 (371)
T ss_pred             CCCEEEECCCC
Confidence            69999999873

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>PLN02827 Alcohol dehydrogenase-like

Probab=95.82  E-value=0.17  Score=45.00  Aligned_cols=81  Identities=19%  Similarity=0.257  Sum_probs=50.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCH-HHHHHHHHHHHHhc
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKE-ADVESMIKTAVDAW  102 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~-~~~~~~~~~~~~~~  102 (269)
                      ..|+++||.|+ |++|..+++.....|+..++.+.+++++.+ +++++   +.+. ++  |..+. ++..+.+.++..  
T Consensus       192 ~~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~~~~~-~a~~l---Ga~~-~i--~~~~~~~~~~~~v~~~~~--  261 (378)
T PLN02827        192 SKGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINPEKAE-KAKTF---GVTD-FI--NPNDLSEPIQQVIKRMTG--  261 (378)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHH-HHHHc---CCcE-EE--cccccchHHHHHHHHHhC--
Confidence            35899999986 899999999888899875543566665544 33333   3321 22  33221 234444444332  


Q ss_pred             CCccEEEEccCC
Q 024338          103 GTVDILINNAGI  114 (269)
Q Consensus       103 ~~id~li~~ag~  114 (269)
                      +++|++|.+.|.
T Consensus       262 ~g~d~vid~~G~  273 (378)
T PLN02827        262 GGADYSFECVGD  273 (378)
T ss_pred             CCCCEEEECCCC
Confidence            369999999983

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=95.81  E-value=0.12  Score=43.10  Aligned_cols=38  Identities=24%  Similarity=0.346  Sum_probs=30.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCC
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARS   60 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~   60 (269)
                      ..+++++|+|.|+. |+|..+++.|+..|..-+.+++.+
T Consensus        20 ~~L~~~~VlvvG~G-glGs~va~~La~~Gvg~i~lvD~D   57 (240)
T TIGR02355        20 EALKASRVLIVGLG-GLGCAASQYLAAAGVGNLTLLDFD   57 (240)
T ss_pred             HHHhCCcEEEECcC-HHHHHHHHHHHHcCCCEEEEEeCC
Confidence            45778899999876 999999999999997766554543

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=95.76  E-value=0.068  Score=45.73  Aligned_cols=80  Identities=20%  Similarity=0.361  Sum_probs=50.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      .++++++|+|+++++|..+++.+...|++++++ .++++..+ ...++   +.+. .  .+..+.+....+. .... ..
T Consensus       138 ~~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~-~~~~~~~~-~~~~~---g~~~-~--~~~~~~~~~~~~~-~~~~-~~  207 (325)
T TIGR02824       138 KAGETVLIHGGASGIGTTAIQLAKAFGARVFTT-AGSDEKCA-ACEAL---GADI-A--INYREEDFVEVVK-AETG-GK  207 (325)
T ss_pred             CCCCEEEEEcCcchHHHHHHHHHHHcCCEEEEE-eCCHHHHH-HHHHc---CCcE-E--EecCchhHHHHHH-HHcC-CC
Confidence            367999999999999999999999999998774 66665543 22322   3221 1  2222222222222 2211 12


Q ss_pred             CccEEEEccC
Q 024338          104 TVDILINNAG  113 (269)
Q Consensus       104 ~id~li~~ag  113 (269)
                      ++|.+++++|
T Consensus       208 ~~d~~i~~~~  217 (325)
T TIGR02824       208 GVDVILDIVG  217 (325)
T ss_pred             CeEEEEECCc
Confidence            5999999987

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=95.75  E-value=0.2  Score=44.86  Aligned_cols=118  Identities=17%  Similarity=0.143  Sum_probs=65.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      ..+++++|. |.++||..++..+...|+.+++...+++++++ +++++   +..  .  .|.+..++..+.+.++... .
T Consensus       184 ~~g~~VlV~-G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~-~a~~~---Ga~--~--v~~~~~~~~~~~v~~~~~~-~  253 (393)
T TIGR02819       184 GPGSTVYIA-GAGPVGLAAAASAQLLGAAVVIVGDLNPARLA-QARSF---GCE--T--VDLSKDATLPEQIEQILGE-P  253 (393)
T ss_pred             CCCCEEEEE-CCCHHHHHHHHHHHHcCCceEEEeCCCHHHHH-HHHHc---CCe--E--EecCCcccHHHHHHHHcCC-C
Confidence            357899995 55899999999888899997765556655443 33333   332  1  2333222333333333221 2


Q ss_pred             CccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Q 024338          104 TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASV  164 (269)
Q Consensus       104 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~  164 (269)
                      ++|++|.+.|....+...+...           ...-...+..+..+  +++|++++++..
T Consensus       254 g~Dvvid~~G~~~~~~~~~~~~-----------~~~~~~~~~~~~~~--~~~G~i~~~G~~  301 (393)
T TIGR02819       254 EVDCAVDCVGFEARGHGHDGKK-----------EAPATVLNSLMEVT--RVGGAIGIPGLY  301 (393)
T ss_pred             CCcEEEECCCCccccccccccc-----------cchHHHHHHHHHHh--hCCCEEEEeeec
Confidence            5999999999642111001100           01111233344444  567999998764

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>PLN02928 oxidoreductase family protein

Probab=95.74  E-value=0.041  Score=48.46  Aligned_cols=37  Identities=27%  Similarity=0.340  Sum_probs=32.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCC
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARS   60 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~   60 (269)
                      .++.||++.|.|. |.||+.+|+.+...|++|+. +.|+
T Consensus       155 ~~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~-~dr~  191 (347)
T PLN02928        155 DTLFGKTVFILGY-GAIGIELAKRLRPFGVKLLA-TRRS  191 (347)
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEE-ECCC
Confidence            4689999999998 69999999999999999988 4665

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=95.74  E-value=0.13  Score=41.58  Aligned_cols=38  Identities=26%  Similarity=0.476  Sum_probs=30.9

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCc-EEEEecCC
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCK-VLVNYARS   60 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~-v~i~~~r~   60 (269)
                      ...+++++|+|.|+ ||+|..+++.|++.|.. +++ .+.+
T Consensus        16 q~~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~l-vD~D   54 (200)
T TIGR02354        16 VQKLEQATVAICGL-GGLGSNVAINLARAGIGKLIL-VDFD   54 (200)
T ss_pred             HHHHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEE-ECCC
Confidence            34577899999999 58999999999999985 555 4555

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>cd08230 glucose_DH Glucose dehydrogenase

Probab=95.74  E-value=0.14  Score=45.09  Aligned_cols=73  Identities=30%  Similarity=0.429  Sum_probs=46.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecC---CHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYAR---SSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r---~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      .|++++|+|+ |++|...+..+...|++|+++ .+   ++++.+ +++++   +...  +  |..+ +++.+ .    ..
T Consensus       172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~-~~~~~~~~~~~-~~~~~---Ga~~--v--~~~~-~~~~~-~----~~  235 (355)
T cd08230         172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVL-NRRDPPDPKAD-IVEEL---GATY--V--NSSK-TPVAE-V----KL  235 (355)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEE-ecCCCCHHHHH-HHHHc---CCEE--e--cCCc-cchhh-h----hh
Confidence            6889999986 899999998888889987774 54   343333 33333   4332  2  3332 22222 1    11


Q ss_pred             cCCccEEEEccC
Q 024338          102 WGTVDILINNAG  113 (269)
Q Consensus       102 ~~~id~li~~ag  113 (269)
                      .+++|++|.+.|
T Consensus       236 ~~~~d~vid~~g  247 (355)
T cd08230         236 VGEFDLIIEATG  247 (355)
T ss_pred             cCCCCEEEECcC
Confidence            247999999997

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=95.72  E-value=0.2  Score=44.63  Aligned_cols=74  Identities=23%  Similarity=0.340  Sum_probs=46.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      .|++++|.|+ +++|..++......|++++++ .++.++..+.++++   +.+. ++  |..+.+.+       .+..++
T Consensus       178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~-~~~~~~~~~~a~~l---Ga~~-~i--~~~~~~~v-------~~~~~~  242 (375)
T PLN02178        178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVI-SRSSEKEREAIDRL---GADS-FL--VTTDSQKM-------KEAVGT  242 (375)
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEE-eCChHHhHHHHHhC---CCcE-EE--cCcCHHHH-------HHhhCC
Confidence            5899999986 899999999888999998775 44443333333333   3322 12  33332222       222246


Q ss_pred             ccEEEEccC
Q 024338          105 VDILINNAG  113 (269)
Q Consensus       105 id~li~~ag  113 (269)
                      +|+++.+.|
T Consensus       243 ~D~vid~~G  251 (375)
T PLN02178        243 MDFIIDTVS  251 (375)
T ss_pred             CcEEEECCC
Confidence            999999987

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=95.71  E-value=0.16  Score=44.75  Aligned_cols=78  Identities=23%  Similarity=0.374  Sum_probs=47.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCc-EEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCK-VLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~-v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      .|+++||.|+ +++|..++......|+. |++ +.+++++.+.+ +++   +.+. ++  |..+.+..+. +.++... .
T Consensus       176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~-~~~~~~~~~~~-~~~---Ga~~-~i--~~~~~~~~~~-i~~~~~~-~  244 (358)
T TIGR03451       176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIA-VDIDDRKLEWA-REF---GATH-TV--NSSGTDPVEA-IRALTGG-F  244 (358)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEE-EcCCHHHHHHH-HHc---CCce-EE--cCCCcCHHHH-HHHHhCC-C
Confidence            5899999985 89999999988889996 555 56666655433 333   3321 22  3333222222 2222111 2


Q ss_pred             CccEEEEccC
Q 024338          104 TVDILINNAG  113 (269)
Q Consensus       104 ~id~li~~ag  113 (269)
                      ++|++|.+.|
T Consensus       245 g~d~vid~~g  254 (358)
T TIGR03451       245 GADVVIDAVG  254 (358)
T ss_pred             CCCEEEECCC
Confidence            5999999987

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=95.70  E-value=0.12  Score=40.82  Aligned_cols=32  Identities=25%  Similarity=0.347  Sum_probs=24.7

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCcEEEEecCCH
Q 024338           29 AVVTGASRGIGRAVATSLGKAGCKVLVNYARSS   61 (269)
Q Consensus        29 vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~   61 (269)
                      |+|.|+ ||+|..+++.|++.|..-+.+.+.+.
T Consensus         2 VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           2 VGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            788886 69999999999999987333345543

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=95.69  E-value=0.13  Score=45.55  Aligned_cols=74  Identities=23%  Similarity=0.320  Sum_probs=45.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      .|++++|.|+ |++|..++......|++++++ ..+.++..++.+++   +.+. ++  |..+.+.+.       +..++
T Consensus       183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~-~~~~~~~~~~~~~~---Ga~~-vi--~~~~~~~~~-------~~~~~  247 (360)
T PLN02586        183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVI-SSSSNKEDEAINRL---GADS-FL--VSTDPEKMK-------AAIGT  247 (360)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEE-eCCcchhhhHHHhC---CCcE-EE--cCCCHHHHH-------hhcCC
Confidence            6889999775 899999999888899998774 44443333333332   3321 22  223322222       22246


Q ss_pred             ccEEEEccC
Q 024338          105 VDILINNAG  113 (269)
Q Consensus       105 id~li~~ag  113 (269)
                      +|++|.+.|
T Consensus       248 ~D~vid~~g  256 (360)
T PLN02586        248 MDYIIDTVS  256 (360)
T ss_pred             CCEEEECCC
Confidence            899999887

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=95.64  E-value=0.069  Score=38.75  Aligned_cols=71  Identities=25%  Similarity=0.360  Sum_probs=50.1

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCccEE
Q 024338           29 AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDIL  108 (269)
Q Consensus        29 vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l  108 (269)
                      ++|.|.+ .+|+.+++.|.+.+..+++ +.++++..+++.+    .+  +.++.+|.++++.++++--      .+.+.+
T Consensus         1 vvI~G~g-~~~~~i~~~L~~~~~~vvv-id~d~~~~~~~~~----~~--~~~i~gd~~~~~~l~~a~i------~~a~~v   66 (116)
T PF02254_consen    1 VVIIGYG-RIGREIAEQLKEGGIDVVV-IDRDPERVEELRE----EG--VEVIYGDATDPEVLERAGI------EKADAV   66 (116)
T ss_dssp             EEEES-S-HHHHHHHHHHHHTTSEEEE-EESSHHHHHHHHH----TT--SEEEES-TTSHHHHHHTTG------GCESEE
T ss_pred             eEEEcCC-HHHHHHHHHHHhCCCEEEE-EECCcHHHHHHHh----cc--cccccccchhhhHHhhcCc------cccCEE
Confidence            4677775 8999999999997778877 5788776554433    22  6689999999887766422      267777


Q ss_pred             EEccC
Q 024338          109 INNAG  113 (269)
Q Consensus       109 i~~ag  113 (269)
                      |....
T Consensus        67 v~~~~   71 (116)
T PF02254_consen   67 VILTD   71 (116)
T ss_dssp             EEESS
T ss_pred             EEccC
Confidence            76664

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=95.61  E-value=0.11  Score=47.25  Aligned_cols=41  Identities=22%  Similarity=0.296  Sum_probs=34.6

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKE   63 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~   63 (269)
                      ...+.||+++|.|.+ .||+.+|+.+...|++|++ +.+++..
T Consensus       249 ~~~LaGKtVgVIG~G-~IGr~vA~rL~a~Ga~ViV-~e~dp~~  289 (476)
T PTZ00075        249 DVMIAGKTVVVCGYG-DVGKGCAQALRGFGARVVV-TEIDPIC  289 (476)
T ss_pred             CCCcCCCEEEEECCC-HHHHHHHHHHHHCCCEEEE-EeCCchh
Confidence            457899999999977 6999999999999999887 4666544

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=95.61  E-value=0.047  Score=42.33  Aligned_cols=35  Identities=29%  Similarity=0.320  Sum_probs=31.6

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEE
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVN   56 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~   56 (269)
                      ..+++||.++|.||+ .+|...++.|.+.|++|.++
T Consensus         8 ~l~l~~~~vlVvGGG-~va~rka~~Ll~~ga~V~VI   42 (157)
T PRK06719          8 MFNLHNKVVVIIGGG-KIAYRKASGLKDTGAFVTVV   42 (157)
T ss_pred             EEEcCCCEEEEECCC-HHHHHHHHHHHhCCCEEEEE
Confidence            357899999999986 89999999999999999885

>PRK08223 hypothetical protein; Validated

Probab=95.58  E-value=0.067  Score=45.55  Aligned_cols=44  Identities=16%  Similarity=0.212  Sum_probs=34.2

Q ss_pred             hcccccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCC
Q 024338           16 ATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARS   60 (269)
Q Consensus        16 ~~~~~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~   60 (269)
                      +..+....+++.+|+|.|+. |+|..+++.|+..|..-+.+++.+
T Consensus        17 iG~e~Q~kL~~s~VlIvG~G-GLGs~va~~LA~aGVG~i~lvD~D   60 (287)
T PRK08223         17 ITPTEQQRLRNSRVAIAGLG-GVGGIHLLTLARLGIGKFTIADFD   60 (287)
T ss_pred             cCHHHHHHHhcCCEEEECCC-HHHHHHHHHHHHhCCCeEEEEeCC
Confidence            33344467889999999986 999999999999998766545544

>PRK08328 hypothetical protein; Provisional

Probab=95.57  E-value=0.21  Score=41.34  Aligned_cols=39  Identities=23%  Similarity=0.373  Sum_probs=31.6

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCC
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARS   60 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~   60 (269)
                      ...+++++|+|.|++ |+|.++++.|+..|..-+.+++.+
T Consensus        22 q~~L~~~~VlIiG~G-GlGs~ia~~La~~Gvg~i~lvD~D   60 (231)
T PRK08328         22 QEKLKKAKVAVVGVG-GLGSPVAYYLAAAGVGRILLIDEQ   60 (231)
T ss_pred             HHHHhCCcEEEECCC-HHHHHHHHHHHHcCCCEEEEEcCC
Confidence            456788999999886 999999999999998755545544

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=95.56  E-value=0.096  Score=42.20  Aligned_cols=82  Identities=17%  Similarity=0.287  Sum_probs=50.6

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCH-------------------HHHHHHHHHHHHcCCc--EE
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSS-------------------KEAEEVCKEIEASGGQ--AL   79 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~-------------------~~~~~~~~~l~~~~~~--~~   79 (269)
                      ...+++++|+|.|++ |+|.++++.|+..|..-+.+++.+.                   .+.+.+.+.+++..+.  +.
T Consensus        16 Q~~L~~s~VlIiG~g-glG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~   94 (197)
T cd01492          16 QKRLRSARILLIGLK-GLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVS   94 (197)
T ss_pred             HHHHHhCcEEEEcCC-HHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEE
Confidence            356778999999865 6999999999999987554344321                   2344455556655443  44


Q ss_pred             EEEccCCCHHHHHHHHHHHHHhcCCccEEEEcc
Q 024338           80 TFGGDVSKEADVESMIKTAVDAWGTVDILINNA  112 (269)
Q Consensus        80 ~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~a  112 (269)
                      .....+++  ...+++       ...|++|.+.
T Consensus        95 ~~~~~~~~--~~~~~~-------~~~dvVi~~~  118 (197)
T cd01492          95 VDTDDISE--KPEEFF-------SQFDVVVATE  118 (197)
T ss_pred             EEecCccc--cHHHHH-------hCCCEEEECC
Confidence            44444441  122222       3678888764

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=95.55  E-value=0.13  Score=45.71  Aligned_cols=39  Identities=23%  Similarity=0.371  Sum_probs=30.8

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCC
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARS   60 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~   60 (269)
                      ...+++++|+|.|++ |+|..+++.|+..|..-+.+++.+
T Consensus        36 q~~l~~~~VliiG~G-glG~~v~~~La~~Gvg~i~ivD~D   74 (370)
T PRK05600         36 QERLHNARVLVIGAG-GLGCPAMQSLASAGVGTITLIDDD   74 (370)
T ss_pred             HHHhcCCcEEEECCC-HHHHHHHHHHHHcCCCEEEEEeCC
Confidence            356788999999885 999999999999997544434443

>PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised

Probab=95.55  E-value=0.033  Score=42.54  Aligned_cols=42  Identities=26%  Similarity=0.397  Sum_probs=35.6

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHH
Q 024338           29 AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEA   73 (269)
Q Consensus        29 vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~   73 (269)
                      |+.+|+++.+|+++|.+|.++|..|+.+   +++..+.+..++..
T Consensus         1 V~L~G~~sKvaraiA~~LC~rgv~V~m~---~~~~y~~lk~~~~~   42 (164)
T PF12076_consen    1 VFLTGNTSKVARAIALALCRRGVQVVML---SKERYESLKSEAPE   42 (164)
T ss_pred             CeecccccHHHHHHHHHHHhcCCEEEEe---cHHHHHHHHHHcCH
Confidence            5789999999999999999999999985   66777777766643

This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases [].

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=95.49  E-value=0.16  Score=40.95  Aligned_cols=37  Identities=19%  Similarity=0.346  Sum_probs=29.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecC
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYAR   59 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r   59 (269)
                      ..+++.+|+|.|++ |+|.++++.|+..|..-+.+++.
T Consensus        15 ~~L~~s~VlviG~g-glGsevak~L~~~GVg~i~lvD~   51 (198)
T cd01485          15 NKLRSAKVLIIGAG-ALGAEIAKNLVLAGIDSITIVDH   51 (198)
T ss_pred             HHHhhCcEEEECCC-HHHHHHHHHHHHcCCCEEEEEEC
Confidence            45677889999887 59999999999999875543443

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=95.48  E-value=0.064  Score=46.42  Aligned_cols=115  Identities=23%  Similarity=0.278  Sum_probs=64.5

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCc--EEEEecCCH--HHHHHHHHHHHH----cCCcEEEEEccCCCHHHHHHHHHHHH
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGCK--VLVNYARSS--KEAEEVCKEIEA----SGGQALTFGGDVSKEADVESMIKTAV   99 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~~--v~i~~~r~~--~~~~~~~~~l~~----~~~~~~~~~~Dls~~~~~~~~~~~~~   99 (269)
                      .+.|+|++|.+|..++..++..|..  +++ +++++  +.++.....+.+    .+....   ...++.  .+. +    
T Consensus         2 kI~IiGatG~vG~~~a~~l~~~g~~~~v~l-vd~~~~~~~l~~~~~dl~d~~~~~~~~~~---i~~~~d--~~~-l----   70 (309)
T cd05294           2 KVSIIGASGRVGSATALLLAKEDVVKEINL-ISRPKSLEKLKGLRLDIYDALAAAGIDAE---IKISSD--LSD-V----   70 (309)
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEE-EECcccccccccccchhhhchhccCCCcE---EEECCC--HHH-h----
Confidence            5899999999999999999999864  666 46643  333322222221    111111   111111  111 2    


Q ss_pred             HhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCc
Q 024338          100 DAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVV  165 (269)
Q Consensus       100 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  165 (269)
                         ...|++|.++|.....   ..+   -.+.++.|..-...+.+.+.+.   .+.+.+|++++..
T Consensus        71 ---~~aDiViitag~p~~~---~~~---r~dl~~~n~~i~~~~~~~i~~~---~~~~~viv~~npv  124 (309)
T cd05294          71 ---AGSDIVIITAGVPRKE---GMS---RLDLAKKNAKIVKKYAKQIAEF---APDTKILVVTNPV  124 (309)
T ss_pred             ---CCCCEEEEecCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHHH---CCCeEEEEeCCch
Confidence               3789999999974321   122   2345555665544444444332   3567888888754

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=95.46  E-value=0.21  Score=40.51  Aligned_cols=45  Identities=24%  Similarity=0.243  Sum_probs=34.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEV   67 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~   67 (269)
                      .+++||.+||.||+ .+|..-++.|++.|++|.++.....+.+.++
T Consensus         5 l~l~gk~vlVvGgG-~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l   49 (205)
T TIGR01470         5 ANLEGRAVLVVGGG-DVALRKARLLLKAGAQLRVIAEELESELTLL   49 (205)
T ss_pred             EEcCCCeEEEECcC-HHHHHHHHHHHHCCCEEEEEcCCCCHHHHHH
Confidence            46889999999986 8999999999999999998533333344443

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=95.46  E-value=0.083  Score=45.24  Aligned_cols=80  Identities=19%  Similarity=0.302  Sum_probs=50.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      .++++++|+|+++++|..+++.+...|++++.+ .++.+..+.+ .+.   +.+ .++  |... .+..+.+.+... ..
T Consensus       143 ~~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~-~~~~~~~~~~-~~~---g~~-~~~--~~~~-~~~~~~~~~~~~-~~  212 (328)
T cd08268         143 RPGDSVLITAASSSVGLAAIQIANAAGATVIAT-TRTSEKRDAL-LAL---GAA-HVI--VTDE-EDLVAEVLRITG-GK  212 (328)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEE-cCCHHHHHHH-HHc---CCC-EEE--ecCC-ccHHHHHHHHhC-CC
Confidence            357899999999999999999999999998874 5565554433 222   221 222  2222 222222222221 12


Q ss_pred             CccEEEEccC
Q 024338          104 TVDILINNAG  113 (269)
Q Consensus       104 ~id~li~~ag  113 (269)
                      ++|.++++.+
T Consensus       213 ~~d~vi~~~~  222 (328)
T cd08268         213 GVDVVFDPVG  222 (328)
T ss_pred             CceEEEECCc
Confidence            5999999887

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.43  E-value=0.044  Score=46.67  Aligned_cols=35  Identities=29%  Similarity=0.327  Sum_probs=32.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEE
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVN   56 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~   56 (269)
                      -+++||.++|+|.+.-+|+.++..|.++|+.|.+.
T Consensus       154 i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~  188 (286)
T PRK14175        154 IDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTIL  188 (286)
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEE
Confidence            37999999999999999999999999999999985

>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.43  E-value=0.51  Score=43.43  Aligned_cols=80  Identities=20%  Similarity=0.358  Sum_probs=50.4

Q ss_pred             cccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHH
Q 024338           19 EAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTA   98 (269)
Q Consensus        19 ~~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~   98 (269)
                      .....+.+|.++|.| .|+.|.++++.|.++|+.|.+ .+++.....++   +...+  +.++..+- +.+    .+   
T Consensus         8 ~~~~~~~~~~v~v~G-~G~sG~a~a~~L~~~G~~V~~-~D~~~~~~~~~---l~~~g--i~~~~~~~-~~~----~~---   72 (473)
T PRK00141          8 SALPQELSGRVLVAG-AGVSGRGIAAMLSELGCDVVV-ADDNETARHKL---IEVTG--VADISTAE-ASD----QL---   72 (473)
T ss_pred             hhcccccCCeEEEEc-cCHHHHHHHHHHHHCCCEEEE-ECCChHHHHHH---HHhcC--cEEEeCCC-chh----Hh---
Confidence            334567788999999 668999999999999998887 45554433222   22212  22322111 111    11   


Q ss_pred             HHhcCCccEEEEccCCCCC
Q 024338           99 VDAWGTVDILINNAGITRD  117 (269)
Q Consensus        99 ~~~~~~id~li~~ag~~~~  117 (269)
                          ...|.||..+|+...
T Consensus        73 ----~~~d~vV~Spgi~~~   87 (473)
T PRK00141         73 ----DSFSLVVTSPGWRPD   87 (473)
T ss_pred             ----cCCCEEEeCCCCCCC
Confidence                267999999998754

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=95.39  E-value=0.29  Score=43.03  Aligned_cols=82  Identities=22%  Similarity=0.337  Sum_probs=47.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-cEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGC-KVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~-~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      .|+++||+| ++++|..+++.+...|+ +++++ .+++++.+ +.+++   +.+. ++..+-.+..+..+.+.++.. -.
T Consensus       177 ~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~-~~~~~~~~-~~~~~---g~~~-vi~~~~~~~~~~~~~i~~~~~-~~  248 (361)
T cd08231         177 AGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVI-DGSPERLE-LAREF---GADA-TIDIDELPDPQRRAIVRDITG-GR  248 (361)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEE-cCCHHHHH-HHHHc---CCCe-EEcCcccccHHHHHHHHHHhC-CC
Confidence            689999997 59999999998888999 77664 56655543 33332   3221 221111111112122222221 12


Q ss_pred             CccEEEEccCC
Q 024338          104 TVDILINNAGI  114 (269)
Q Consensus       104 ~id~li~~ag~  114 (269)
                      ++|+++.+.|.
T Consensus       249 ~~d~vid~~g~  259 (361)
T cd08231         249 GADVVIEASGH  259 (361)
T ss_pred             CCcEEEECCCC
Confidence            69999999873

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>COG2263 Predicted RNA methylase [Translation, ribosomal structure and biogenesis]

Probab=95.36  E-value=0.5  Score=37.55  Aligned_cols=80  Identities=21%  Similarity=0.200  Sum_probs=61.4

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      .-+++||+|+=.|+..|+   ++-..+-.|++-++-+..+++..+...+...+..+++.++.+|+++..           
T Consensus        41 ~g~l~g~~V~DlG~GTG~---La~ga~~lGa~~V~~vdiD~~a~ei~r~N~~~l~g~v~f~~~dv~~~~-----------  106 (198)
T COG2263          41 RGDLEGKTVLDLGAGTGI---LAIGAALLGASRVLAVDIDPEALEIARANAEELLGDVEFVVADVSDFR-----------  106 (198)
T ss_pred             cCCcCCCEEEEcCCCcCH---HHHHHHhcCCcEEEEEecCHHHHHHHHHHHHhhCCceEEEEcchhhcC-----------
Confidence            357999999999998664   233334568666665789999888888777777889999999999743           


Q ss_pred             hcCCccEEEEccCCCC
Q 024338          101 AWGTVDILINNAGITR  116 (269)
Q Consensus       101 ~~~~id~li~~ag~~~  116 (269)
                        ++.|.+|-|.-+..
T Consensus       107 --~~~dtvimNPPFG~  120 (198)
T COG2263         107 --GKFDTVIMNPPFGS  120 (198)
T ss_pred             --CccceEEECCCCcc
Confidence              57899999986543

>PRK04148 hypothetical protein; Provisional

Probab=95.35  E-value=0.19  Score=37.69  Aligned_cols=79  Identities=22%  Similarity=0.212  Sum_probs=54.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCC-----------------
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK-----------------   87 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~-----------------   87 (269)
                      +++.+++.|.+  -|.++|..|++.|++|+.+ +.++...+...+.      .+.++..|+.+                 
T Consensus        16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaI-Di~~~aV~~a~~~------~~~~v~dDlf~p~~~~y~~a~liysirp   86 (134)
T PRK04148         16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVI-DINEKAVEKAKKL------GLNAFVDDLFNPNLEIYKNAKLIYSIRP   86 (134)
T ss_pred             cCCEEEEEEec--CCHHHHHHHHHCCCEEEEE-ECCHHHHHHHHHh------CCeEEECcCCCCCHHHHhcCCEEEEeCC
Confidence            56789999998  7778899999999999984 7777654433221      34567777765                 


Q ss_pred             HHHHHHHHHHHHHhcCCccEEEEccC
Q 024338           88 EADVESMIKTAVDAWGTVDILINNAG  113 (269)
Q Consensus        88 ~~~~~~~~~~~~~~~~~id~li~~ag  113 (269)
                      +.+++..+-++.++. +.|.+|..-+
T Consensus        87 p~el~~~~~~la~~~-~~~~~i~~l~  111 (134)
T PRK04148         87 PRDLQPFILELAKKI-NVPLIIKPLS  111 (134)
T ss_pred             CHHHHHHHHHHHHHc-CCCEEEEcCC
Confidence            344566666666553 4677766544

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=95.34  E-value=0.25  Score=37.39  Aligned_cols=77  Identities=17%  Similarity=0.298  Sum_probs=47.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCcEEEEecCC-------------------HHHHHHHHHHHHHcCC--cEEEEEccCC
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGCKVLVNYARS-------------------SKEAEEVCKEIEASGG--QALTFGGDVS   86 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~-------------------~~~~~~~~~~l~~~~~--~~~~~~~Dls   86 (269)
                      +++|.|+ ||+|.++++.|+..|..-+.+++.+                   ..+.+.+.+.+++...  ++..+..++.
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~   79 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS   79 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence            3788887 7999999999999998644334433                   1234445555555443  3444555554


Q ss_pred             CHHHHHHHHHHHHHhcCCccEEEEccC
Q 024338           87 KEADVESMIKTAVDAWGTVDILINNAG  113 (269)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~id~li~~ag  113 (269)
                      +.. .       .+.+.+.|++|.+..
T Consensus        80 ~~~-~-------~~~~~~~diVi~~~d   98 (143)
T cd01483          80 EDN-L-------DDFLDGVDLVIDAID   98 (143)
T ss_pred             hhh-H-------HHHhcCCCEEEECCC
Confidence            322 1       222347888888775

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=95.32  E-value=0.072  Score=41.45  Aligned_cols=85  Identities=26%  Similarity=0.273  Sum_probs=56.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHH-------HHcCCcEEEEEccCCCHHHHHHHHHH--
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEI-------EASGGQALTFGGDVSKEADVESMIKT--   97 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l-------~~~~~~~~~~~~Dls~~~~~~~~~~~--   97 (269)
                      +++-+.|. |.+|..+++.|+++|++|.+ ..|++++.+++.++-       .+.-.+..++-.-+.+.+++++++..  
T Consensus         2 ~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~-~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~   79 (163)
T PF03446_consen    2 MKIGFIGL-GNMGSAMARNLAKAGYEVTV-YDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGEN   79 (163)
T ss_dssp             BEEEEE---SHHHHHHHHHHHHTTTEEEE-EESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTT
T ss_pred             CEEEEEch-HHHHHHHHHHHHhcCCeEEe-eccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhH
Confidence            45777887 69999999999999999988 588888877765431       11011224555667888889998887  


Q ss_pred             HHHhcCCccEEEEccC
Q 024338           98 AVDAWGTVDILINNAG  113 (269)
Q Consensus        98 ~~~~~~~id~li~~ag  113 (269)
                      +.....+=.++|.+..
T Consensus        80 i~~~l~~g~iiid~sT   95 (163)
T PF03446_consen   80 ILAGLRPGKIIIDMST   95 (163)
T ss_dssp             HGGGS-TTEEEEE-SS
T ss_pred             HhhccccceEEEecCC
Confidence            6665544456665554

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=95.27  E-value=0.3  Score=41.57  Aligned_cols=162  Identities=20%  Similarity=0.271  Sum_probs=86.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHH-HcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLG-KAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~-~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      +|+|++|.||+|..|. ++-+|| -.|++|+..++ +.++..-+..++   +-+.   ..|--++..+.+++.+   .++
T Consensus       153 ~geTv~VSaAsGAvGq-l~GQ~Ak~~Gc~VVGsaG-S~EKv~ll~~~~---G~d~---afNYK~e~~~~~aL~r---~~P  221 (343)
T KOG1196|consen  153 KGETVFVSAASGAVGQ-LVGQFAKLMGCYVVGSAG-SKEKVDLLKTKF---GFDD---AFNYKEESDLSAALKR---CFP  221 (343)
T ss_pred             CCCEEEEeeccchhHH-HHHHHHHhcCCEEEEecC-ChhhhhhhHhcc---CCcc---ceeccCccCHHHHHHH---hCC
Confidence            5799999999999995 555555 46999888544 444444344332   1110   1122233345555544   343


Q ss_pred             -CccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHH
Q 024338          104 -TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAG  182 (269)
Q Consensus       104 -~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  182 (269)
                       .||+.+-|.|..                          +..+.+..|  +..|||+.-+-+..+.-........     
T Consensus       222 ~GIDiYfeNVGG~--------------------------~lDavl~nM--~~~gri~~CG~ISqYN~~~~~~~~~-----  268 (343)
T KOG1196|consen  222 EGIDIYFENVGGK--------------------------MLDAVLLNM--NLHGRIAVCGMISQYNLENPEGLHN-----  268 (343)
T ss_pred             CcceEEEeccCcH--------------------------HHHHHHHhh--hhccceEeeeeehhccccCCccccc-----
Confidence             799999999842                          123344444  5568988766444332221121111     


Q ss_pred             HHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHH
Q 024338          183 VIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGL  243 (269)
Q Consensus       183 l~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  243 (269)
                         +..-+.     +.+++..    +.-++..... +++.+.+...+..++....|++++-
T Consensus       269 ---l~~ii~-----Kr~~iqg----flv~d~~d~~-~k~ld~l~~~ikegKI~y~edi~~G  316 (343)
T KOG1196|consen  269 ---LSTIIY-----KRIRIQG----FLVSDYLDKY-PKFLDFLLPYIKEGKITYVEDIADG  316 (343)
T ss_pred             ---hhhhee-----eeEEeee----EEeechhhhh-HHHHHHHHHHHhcCceEEehhHHHH
Confidence               111111     1234432    2333333333 4555555556666777777887765

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=95.26  E-value=0.48  Score=41.09  Aligned_cols=115  Identities=14%  Similarity=0.161  Sum_probs=67.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-cEEEEecCCHHHHHHHHHHHHHcC---CcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGC-KVLVNYARSSKEAEEVCKEIEASG---GQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~-~v~i~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      ..+.|+|+ |.+|..++..++..|. .-+++++.+++.++....++....   ....+...  .|.+       .    +
T Consensus         4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~dy~-------~----~   69 (312)
T cd05293           4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KDYS-------V----T   69 (312)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CCHH-------H----h
Confidence            46899996 9999999999998873 334446777666655555554332   11111211  1211       1    2


Q ss_pred             CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-CCCCeEEEEcCCc
Q 024338          103 GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMK-KKKGRIINIASVV  165 (269)
Q Consensus       103 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~iv~isS~~  165 (269)
                      .+.|++|.+||.....   ..+.   .+.++.|..-    .+.+.+.+.+ ..++.++++|.-.
T Consensus        70 ~~adivvitaG~~~k~---g~~R---~dll~~N~~i----~~~~~~~i~~~~p~~~vivvsNP~  123 (312)
T cd05293          70 ANSKVVIVTAGARQNE---GESR---LDLVQRNVDI----FKGIIPKLVKYSPNAILLVVSNPV  123 (312)
T ss_pred             CCCCEEEECCCCCCCC---CCCH---HHHHHHHHHH----HHHHHHHHHHhCCCcEEEEccChH
Confidence            3789999999975431   2232   3445555554    5555554443 4567888887644

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=95.23  E-value=0.06  Score=44.40  Aligned_cols=38  Identities=32%  Similarity=0.364  Sum_probs=31.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCc--EEEEecCC
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCK--VLVNYARS   60 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~--v~i~~~r~   60 (269)
                      .++++++++|.|+ |+.|+++++.|++.|..  -+.++.|+
T Consensus        21 ~~l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~   60 (226)
T cd05311          21 KKIEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSK   60 (226)
T ss_pred             CCccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCC
Confidence            4688999999999 79999999999999986  34335776

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.23  E-value=0.055  Score=41.05  Aligned_cols=40  Identities=18%  Similarity=0.250  Sum_probs=35.2

Q ss_pred             ccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCC
Q 024338           20 AAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARS   60 (269)
Q Consensus        20 ~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~   60 (269)
                      +..+++||.++|.|.+.-+|+.++..|.++|+.|.+. .++
T Consensus        22 ~~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~-~~~   61 (140)
T cd05212          22 EGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSC-DWK   61 (140)
T ss_pred             cCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEe-CCC
Confidence            3458999999999999999999999999999999884 443

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=95.15  E-value=0.52  Score=41.24  Aligned_cols=76  Identities=29%  Similarity=0.341  Sum_probs=47.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-cEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc-
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGC-KVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW-  102 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~-~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~-  102 (269)
                      .|++++|+|+ +++|..+++.+...|+ .+++ +.+++++.+. +.++   +.+.   ..|..+.+ +   .+++.+.. 
T Consensus       172 ~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~-~~~~~~~~~~-~~~~---ga~~---~i~~~~~~-~---~~~l~~~~~  238 (351)
T cd08233         172 PGDTALVLGA-GPIGLLTILALKAAGASKIIV-SEPSEARREL-AEEL---GATI---VLDPTEVD-V---VAEVRKLTG  238 (351)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEE-ECCCHHHHHH-HHHh---CCCE---EECCCccC-H---HHHHHHHhC
Confidence            5799999985 8999999999999999 5655 4666665543 3333   3322   12333322 2   22232222 


Q ss_pred             -CCccEEEEccC
Q 024338          103 -GTVDILINNAG  113 (269)
Q Consensus       103 -~~id~li~~ag  113 (269)
                       +++|+++.+.|
T Consensus       239 ~~~~d~vid~~g  250 (351)
T cd08233         239 GGGVDVSFDCAG  250 (351)
T ss_pred             CCCCCEEEECCC
Confidence             24999999987

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>PTZ00117 malate dehydrogenase; Provisional

Probab=95.14  E-value=0.17  Score=44.04  Aligned_cols=116  Identities=19%  Similarity=0.255  Sum_probs=65.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcC-CcEEEEecCCHHHHHHHHHHHHHc----CCcEEEEEccCCCHHHHHHHHHHHH
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAG-CKVLVNYARSSKEAEEVCKEIEAS----GGQALTFGGDVSKEADVESMIKTAV   99 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G-~~v~i~~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dls~~~~~~~~~~~~~   99 (269)
                      ..+.+.|+|| |.+|..++..++..| ..+++ ++.+++.++...-.+...    +.... +.. -+|   .+ .+    
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L-~Di~~~~~~g~~lDl~~~~~~~~~~~~-i~~-~~d---~~-~l----   71 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVL-YDVIKGVPQGKALDLKHFSTLVGSNIN-ILG-TNN---YE-DI----   71 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEE-EECCCccchhHHHHHhhhccccCCCeE-EEe-CCC---HH-Hh----
Confidence            4578999997 889999999999999 56444 677765443222222111    11111 111 012   12 22    


Q ss_pred             HhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-CCCCeEEEEcCCc
Q 024338          100 DAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMK-KKKGRIINIASVV  165 (269)
Q Consensus       100 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~iv~isS~~  165 (269)
                         ..-|++|.++|.....   ..+   -.+.+..|.    .+.+.+.+.+.+ .+++.++++|...
T Consensus        72 ---~~ADiVVitag~~~~~---g~~---r~dll~~n~----~i~~~i~~~i~~~~p~a~vivvsNP~  125 (319)
T PTZ00117         72 ---KDSDVVVITAGVQRKE---EMT---REDLLTING----KIMKSVAESVKKYCPNAFVICVTNPL  125 (319)
T ss_pred             ---CCCCEEEECCCCCCCC---CCC---HHHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecChH
Confidence               2789999999864321   122   234555565    345555555543 3456678776644

>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

Probab=95.13  E-value=0.16  Score=43.87  Aligned_cols=41  Identities=17%  Similarity=0.268  Sum_probs=31.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHH
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAE   65 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~   65 (269)
                      .++++++|+| .|++|...+..+...|+++++.+++++++++
T Consensus       143 ~~~~~vlV~G-~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~  183 (308)
T TIGR01202       143 VKVLPDLIVG-HGTLGRLLARLTKAAGGSPPAVWETNPRRRD  183 (308)
T ss_pred             cCCCcEEEEC-CCHHHHHHHHHHHHcCCceEEEeCCCHHHHH
Confidence            3578899997 5899999998888889997665566665543

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=95.10  E-value=0.52  Score=38.48  Aligned_cols=78  Identities=21%  Similarity=0.204  Sum_probs=52.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHH-------------cCCcEEEEEccCCCHHHH
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEA-------------SGGQALTFGGDVSKEADV   91 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~-------------~~~~~~~~~~Dls~~~~~   91 (269)
                      .+.+||+.|+..|   .=+..|+++|++|+. +..++...+.+.++..-             .+.++.++.+|+.+.+. 
T Consensus        34 ~~~rvLd~GCG~G---~da~~LA~~G~~V~g-vD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~-  108 (213)
T TIGR03840        34 AGARVFVPLCGKS---LDLAWLAEQGHRVLG-VELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTA-  108 (213)
T ss_pred             CCCeEEEeCCCch---hHHHHHHhCCCeEEE-EeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCc-
Confidence            5679999999876   457788999999998 47777766654332110             13467888999987542 


Q ss_pred             HHHHHHHHHhcCCccEEEEccCCC
Q 024338           92 ESMIKTAVDAWGTVDILINNAGIT  115 (269)
Q Consensus        92 ~~~~~~~~~~~~~id~li~~ag~~  115 (269)
                              +..++.|.++..+...
T Consensus       109 --------~~~~~fD~i~D~~~~~  124 (213)
T TIGR03840       109 --------ADLGPVDAVYDRAALI  124 (213)
T ss_pred             --------ccCCCcCEEEechhhc
Confidence                    1124678887766543

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=95.07  E-value=0.24  Score=42.89  Aligned_cols=117  Identities=22%  Similarity=0.236  Sum_probs=65.5

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC--cEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGC--KVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTV  105 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~--~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i  105 (269)
                      .+.|+|++|.+|.++|..++.+|.  ++++ ++.+  .++...-++........+....  ..+++       .+.+...
T Consensus         2 KI~IIGaaG~VG~~~a~~l~~~~~~~elvL-iDi~--~a~g~alDL~~~~~~~~i~~~~--~~~~~-------y~~~~da   69 (310)
T cd01337           2 KVAVLGAAGGIGQPLSLLLKLNPLVSELAL-YDIV--NTPGVAADLSHINTPAKVTGYL--GPEEL-------KKALKGA   69 (310)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCcEEEE-EecC--ccceeehHhHhCCCcceEEEec--CCCch-------HHhcCCC
Confidence            578999999999999999998883  4444 5655  2222222233221111111110  00111       1223478


Q ss_pred             cEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCc
Q 024338          106 DILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVV  165 (269)
Q Consensus       106 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  165 (269)
                      |++|.+||.....      .+.-.+.++.|..-...+.+.+.++   .+.+.++++|-..
T Consensus        70 DivvitaG~~~k~------g~tR~dll~~N~~i~~~i~~~i~~~---~p~a~vivvtNPv  120 (310)
T cd01337          70 DVVVIPAGVPRKP------GMTRDDLFNINAGIVRDLATAVAKA---CPKALILIISNPV  120 (310)
T ss_pred             CEEEEeCCCCCCC------CCCHHHHHHHHHHHHHHHHHHHHHh---CCCeEEEEccCch
Confidence            9999999974321      1234556677766544444444332   4577888888765

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=95.07  E-value=0.12  Score=47.11  Aligned_cols=79  Identities=24%  Similarity=0.288  Sum_probs=58.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      ....+.++|.|+ |.+|+.+++.|.++|..+++ +.++++..+++.++    ...+.++.+|.++.+.++++-      .
T Consensus       228 ~~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~v-id~~~~~~~~~~~~----~~~~~~i~gd~~~~~~L~~~~------~  295 (453)
T PRK09496        228 EKPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKL-IERDPERAEELAEE----LPNTLVLHGDGTDQELLEEEG------I  295 (453)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCeEEE-EECCHHHHHHHHHH----CCCCeEEECCCCCHHHHHhcC------C
Confidence            345688999999 89999999999999999988 57887766555443    235667889999887655432      1


Q ss_pred             CCccEEEEccC
Q 024338          103 GTVDILINNAG  113 (269)
Q Consensus       103 ~~id~li~~ag  113 (269)
                      .+.|.+|.+..
T Consensus       296 ~~a~~vi~~~~  306 (453)
T PRK09496        296 DEADAFIALTN  306 (453)
T ss_pred             ccCCEEEECCC
Confidence            36777775543

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=95.05  E-value=0.14  Score=44.44  Aligned_cols=36  Identities=19%  Similarity=0.210  Sum_probs=31.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARS   60 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~   60 (269)
                      .++++||.|+++++|..+++.....|+.++++++.+
T Consensus       146 ~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~  181 (341)
T cd08290         146 PGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDR  181 (341)
T ss_pred             CCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCC
Confidence            579999999999999999999999999988865443

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=95.04  E-value=0.12  Score=44.46  Aligned_cols=79  Identities=22%  Similarity=0.338  Sum_probs=49.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      .+.+++|+|+++++|..+++.+...|++++.+ .++.+..+.+ +++   +... +  .|..+.+..+.+. +... ..+
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~-~~~~~~~~~~-~~~---g~~~-~--~~~~~~~~~~~~~-~~~~-~~~  211 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGA-AGGPAKTALV-RAL---GADV-A--VDYTRPDWPDQVR-EALG-GGG  211 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEE-eCCHHHHHHH-HHc---CCCE-E--EecCCccHHHHHH-HHcC-CCC
Confidence            47899999999999999999999999998774 5666554433 332   3221 1  2333333222222 1111 125


Q ss_pred             ccEEEEccC
Q 024338          105 VDILINNAG  113 (269)
Q Consensus       105 id~li~~ag  113 (269)
                      +|.++++.|
T Consensus       212 ~d~vl~~~g  220 (324)
T cd08244         212 VTVVLDGVG  220 (324)
T ss_pred             ceEEEECCC
Confidence            999999886

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=95.03  E-value=0.12  Score=44.58  Aligned_cols=79  Identities=14%  Similarity=0.245  Sum_probs=49.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      .|.++||.|+++++|.++++.....|++++++ .++.+..+.+.+ +   +.+ .++  +-.+ .+..+.+.+.... .+
T Consensus       139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~-~~~~~~~~~~~~-~---g~~-~~~--~~~~-~~~~~~i~~~~~~-~~  208 (324)
T cd08292         139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINL-VRRDAGVAELRA-L---GIG-PVV--STEQ-PGWQDKVREAAGG-AP  208 (324)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEE-ecCHHHHHHHHh-c---CCC-EEE--cCCC-chHHHHHHHHhCC-CC
Confidence            57999999999999999999999999998875 455554443332 2   322 122  2222 2222222222111 25


Q ss_pred             ccEEEEccC
Q 024338          105 VDILINNAG  113 (269)
Q Consensus       105 id~li~~ag  113 (269)
                      +|+++.+.|
T Consensus       209 ~d~v~d~~g  217 (324)
T cd08292         209 ISVALDSVG  217 (324)
T ss_pred             CcEEEECCC
Confidence            999999887

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.03  E-value=0.076  Score=45.14  Aligned_cols=35  Identities=29%  Similarity=0.375  Sum_probs=33.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEE
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVN   56 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~   56 (269)
                      -+++||.++|.|.|.-+|+.++..|.++|+.|.+.
T Consensus       153 i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~  187 (285)
T PRK14191        153 IEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVC  187 (285)
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEE
Confidence            47899999999999999999999999999999884

>PRK05442 malate dehydrogenase; Provisional

Probab=95.02  E-value=0.22  Score=43.41  Aligned_cols=113  Identities=15%  Similarity=0.198  Sum_probs=65.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-------cEEEEecCCH--HHHHHHHHHHHHcC----CcEEEEEccCCCHHHHHH
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGC-------KVLVNYARSS--KEAEEVCKEIEASG----GQALTFGGDVSKEADVES   93 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~-------~v~i~~~r~~--~~~~~~~~~l~~~~----~~~~~~~~Dls~~~~~~~   93 (269)
                      +.+.|+|++|.+|..++..++..|.       ++++ .+.++  +.++...-++....    ..+. +    +.      
T Consensus         5 ~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~L-iDi~~~~~~~~g~a~Dl~~~~~~~~~~~~-i----~~------   72 (326)
T PRK05442          5 VRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQL-LEIPPALKALEGVVMELDDCAFPLLAGVV-I----TD------   72 (326)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEE-EecCCcccccceeehhhhhhhhhhcCCcE-E----ec------
Confidence            4689999999999999999988763       3444 45533  22332222222211    1111 1    10      


Q ss_pred             HHHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-C-CCCeEEEEcCC
Q 024338           94 MIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMK-K-KKGRIINIASV  164 (269)
Q Consensus        94 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~-~~~~iv~isS~  164 (269)
                         ..-+.+..-|++|.+||....      +.+.-.+.++.|..-    .+.+.+.+.+ . +.+.++++|--
T Consensus        73 ---~~y~~~~daDiVVitaG~~~k------~g~tR~dll~~Na~i----~~~i~~~i~~~~~~~~iiivvsNP  132 (326)
T PRK05442         73 ---DPNVAFKDADVALLVGARPRG------PGMERKDLLEANGAI----FTAQGKALNEVAARDVKVLVVGNP  132 (326)
T ss_pred             ---ChHHHhCCCCEEEEeCCCCCC------CCCcHHHHHHHHHHH----HHHHHHHHHHhCCCCeEEEEeCCc
Confidence               111223478999999996432      122345566666654    6666666655 3 46778877753

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=95.02  E-value=0.035  Score=43.05  Aligned_cols=40  Identities=25%  Similarity=0.341  Sum_probs=31.2

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSS   61 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~   61 (269)
                      .-+++||.++|.|.|.-+|+.++..|.++|+.|.+. ....
T Consensus        31 ~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~-h~~T   70 (160)
T PF02882_consen   31 GIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTIC-HSKT   70 (160)
T ss_dssp             T-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE--TTS
T ss_pred             CCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEec-cCCC
Confidence            347999999999999999999999999999999883 4443

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=95.00  E-value=0.18  Score=43.63  Aligned_cols=117  Identities=21%  Similarity=0.236  Sum_probs=64.3

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCC-cEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCccE
Q 024338           29 AVVTGASRGIGRAVATSLGKAGC-KVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDI  107 (269)
Q Consensus        29 vlItGas~giG~~~a~~l~~~G~-~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~  107 (269)
                      +.|+|++|.+|.++|..++.++. .-+++++.++  .....-++........+..+.  +.++       ..+.+...|+
T Consensus         2 V~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~--a~g~a~DL~~~~~~~~i~~~~--~~~~-------~~~~~~daDi   70 (312)
T TIGR01772         2 VAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG--AAGVAADLSHIPTAASVKGFS--GEEG-------LENALKGADV   70 (312)
T ss_pred             EEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC--CcEEEchhhcCCcCceEEEec--CCCc-------hHHHcCCCCE
Confidence            68999999999999999998874 3333356655  111111222111111111100  0011       1223348999


Q ss_pred             EEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-CCCCeEEEEcCCcc
Q 024338          108 LINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMK-KKKGRIINIASVVG  166 (269)
Q Consensus       108 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~iv~isS~~~  166 (269)
                      +|.+||.....      ..+-.+.++.|+.-    .+.+.+.+.+ .+++.++++|-..-
T Consensus        71 vvitaG~~~~~------g~~R~dll~~N~~I----~~~i~~~i~~~~p~~iiivvsNPvD  120 (312)
T TIGR01772        71 VVIPAGVPRKP------GMTRDDLFNVNAGI----VKDLVAAVAESCPKAMILVITNPVN  120 (312)
T ss_pred             EEEeCCCCCCC------CccHHHHHHHhHHH----HHHHHHHHHHhCCCeEEEEecCchh
Confidence            99999974321      12344566666663    5555555543 45677888877653

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PRK02006 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.98  E-value=0.73  Score=42.70  Aligned_cols=127  Identities=16%  Similarity=0.200  Sum_probs=68.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      +++++|.++|.|.. +.|.++|+.|.++|+.|.+...+.....   .+.+...+..+.+...+.. +    ..+      
T Consensus         3 ~~~~~~~i~v~G~G-~sG~s~a~~L~~~G~~v~~~D~~~~~~~---~~~L~~~~~~~~~~~g~~~-~----~~~------   67 (498)
T PRK02006          3 GDLQGPMVLVLGLG-ESGLAMARWCARHGARLRVADTREAPPN---LAALRAELPDAEFVGGPFD-P----ALL------   67 (498)
T ss_pred             cccCCCEEEEEeec-HhHHHHHHHHHHCCCEEEEEcCCCCchh---HHHHHhhcCCcEEEeCCCc-h----hHh------
Confidence            45678999999954 7899999999999999988533322111   2223333223333322222 1    111      


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHH--HHHhHHHHHHHHHHHHHHHhCC-CCeEEEEcCCccc
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVI--DLNLTGVFLCTQAAAKIMMKKK-KGRIINIASVVGL  167 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~--~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~  167 (269)
                       ...|.||...|+....   +.....+.+.-  .+.+.+...++..++..+..+. ...+|-|+..-|.
T Consensus        68 -~~~d~vv~sp~I~~~~---~~~~~~~~~a~~~~i~v~~~~e~~~~~~~~l~~~~~~~~~I~VTGTnGK  132 (498)
T PRK02006         68 -DGVDLVALSPGLSPLE---AALAPLVAAARERGIPVWGEIELFAQALAALGASGYAPKVLAITGTNGK  132 (498)
T ss_pred             -cCCCEEEECCCCCCcc---cccCHHHHHHHHCCCcEEEHHHHHHHHHhhhccccCCCCEEEEECCCcH
Confidence             2579999999975421   00112333332  3445555455444444332221 2367777766554

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=94.97  E-value=0.24  Score=42.90  Aligned_cols=77  Identities=14%  Similarity=0.188  Sum_probs=46.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCH-------------------HHHHHHHHHHHHcC--CcEEEEEccCC
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSS-------------------KEAEEVCKEIEASG--GQALTFGGDVS   86 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~-------------------~~~~~~~~~l~~~~--~~~~~~~~Dls   86 (269)
                      .|||.|+ ||+|.++++.|+..|..-+.+++.+.                   .+.+...+.+++..  .++..+..+++
T Consensus         1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~   79 (312)
T cd01489           1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIK   79 (312)
T ss_pred             CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCC
Confidence            3788887 79999999999999977554444322                   23344455555543  34555555666


Q ss_pred             CHHHHHHHHHHHHHhcCCccEEEEcc
Q 024338           87 KEADVESMIKTAVDAWGTVDILINNA  112 (269)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~id~li~~a  112 (269)
                      +.....+++       ...|+||++.
T Consensus        80 ~~~~~~~f~-------~~~DvVv~a~   98 (312)
T cd01489          80 DPDFNVEFF-------KQFDLVFNAL   98 (312)
T ss_pred             CccchHHHH-------hcCCEEEECC
Confidence            532122222       2677777665

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=94.93  E-value=0.084  Score=36.91  Aligned_cols=42  Identities=29%  Similarity=0.416  Sum_probs=35.0

Q ss_pred             EEEeCCCCchHHHHHHHHHHcC---CcEEEEecCCHHHHHHHHHHH
Q 024338           29 AVVTGASRGIGRAVATSLGKAG---CKVLVNYARSSKEAEEVCKEI   71 (269)
Q Consensus        29 vlItGas~giG~~~a~~l~~~G---~~v~i~~~r~~~~~~~~~~~l   71 (269)
                      +.|. |+|.+|.++++.|++.|   .++.+...|++++.+++.++.
T Consensus         2 I~iI-G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~   46 (96)
T PF03807_consen    2 IGII-GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEY   46 (96)
T ss_dssp             EEEE-STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHC
T ss_pred             EEEE-CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhh
Confidence            3445 77899999999999999   888865699999888887765

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>TIGR00936 ahcY adenosylhomocysteinase

Probab=94.91  E-value=0.35  Score=43.37  Aligned_cols=40  Identities=20%  Similarity=0.258  Sum_probs=33.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKE   63 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~   63 (269)
                      ..+.||+++|.|.. .||+.+++.+...|++|++ +.+++.+
T Consensus       191 ~~l~Gk~VvViG~G-~IG~~vA~~ak~~Ga~ViV-~d~dp~r  230 (406)
T TIGR00936       191 LLIAGKTVVVAGYG-WCGKGIAMRARGMGARVIV-TEVDPIR  230 (406)
T ss_pred             CCCCcCEEEEECCC-HHHHHHHHHHhhCcCEEEE-EeCChhh
Confidence            35789999999964 7999999999999999888 5666654

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=94.90  E-value=0.18  Score=34.59  Aligned_cols=36  Identities=31%  Similarity=0.532  Sum_probs=30.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcC-CcEEEEecC
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAG-CKVLVNYAR   59 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G-~~v~i~~~r   59 (269)
                      .++++|+++|.|+ |+.|+.+++.+.+.| ..+.+ ..|
T Consensus        19 ~~~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v-~~r   55 (86)
T cd05191          19 KSLKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVL-CDR   55 (86)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEE-EcC
Confidence            6688999999999 999999999999985 55555 454

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=94.90  E-value=0.17  Score=43.60  Aligned_cols=77  Identities=23%  Similarity=0.305  Sum_probs=48.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      .+++++|.|+++++|..+++.....|++++.+ .+++++.+.+ +++   +... +  .|..+. . .+.+.+..  -++
T Consensus       146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~-~~~~~~~~~~-~~~---g~~~-v--~~~~~~-~-~~~~~~~~--~~~  213 (326)
T cd08289         146 EQGPVLVTGATGGVGSLAVSILAKLGYEVVAS-TGKADAADYL-KKL---GAKE-V--IPREEL-Q-EESIKPLE--KQR  213 (326)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEE-ecCHHHHHHH-HHc---CCCE-E--EcchhH-H-HHHHHhhc--cCC
Confidence            36899999999999999999999999998774 5665554433 333   3211 1  122221 1 12222221  136


Q ss_pred             ccEEEEccC
Q 024338          105 VDILINNAG  113 (269)
Q Consensus       105 id~li~~ag  113 (269)
                      +|.++.+.|
T Consensus       214 ~d~vld~~g  222 (326)
T cd08289         214 WAGAVDPVG  222 (326)
T ss_pred             cCEEEECCc
Confidence            899998876

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=94.87  E-value=0.65  Score=40.34  Aligned_cols=75  Identities=23%  Similarity=0.406  Sum_probs=47.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      .++++||.| ++++|..++..+...|++++++ .+++++.+.+ +++   +.+ .++  |..+.+ ..+.+.+.    ++
T Consensus       163 ~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~-~~~~~~~~~~-~~~---g~~-~~i--~~~~~~-~~~~~~~~----~~  228 (333)
T cd08296         163 PGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAI-SRGSDKADLA-RKL---GAH-HYI--DTSKED-VAEALQEL----GG  228 (333)
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEE-eCChHHHHHH-HHc---CCc-EEe--cCCCcc-HHHHHHhc----CC
Confidence            578999999 7999999999999999997774 6665554433 433   322 122  222222 22222222    36


Q ss_pred             ccEEEEccC
Q 024338          105 VDILINNAG  113 (269)
Q Consensus       105 id~li~~ag  113 (269)
                      +|.++.+.|
T Consensus       229 ~d~vi~~~g  237 (333)
T cd08296         229 AKLILATAP  237 (333)
T ss_pred             CCEEEECCC
Confidence            899998765

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=94.85  E-value=0.36  Score=42.07  Aligned_cols=115  Identities=18%  Similarity=0.199  Sum_probs=64.5

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC-------cEEEEecCCH--HHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHH
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGC-------KVLVNYARSS--KEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTA   98 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~-------~v~i~~~r~~--~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~   98 (269)
                      .+.|+|++|.+|..++..++..|.       ++++ .+.++  +.++....++......  ... +..    +.   ...
T Consensus         5 KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L-~Di~~~~~~a~g~a~Dl~~~~~~--~~~-~~~----i~---~~~   73 (323)
T TIGR01759         5 RVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHL-LDIPPAMKALEGVAMELEDCAFP--LLA-GVV----AT---TDP   73 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEE-EecCCcccccchHHHHHhhcccc--ccC-CcE----Ee---cCh
Confidence            588999999999999999998883       4555 46543  2233333344322100  000 110    00   001


Q ss_pred             HHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-C-CCeEEEEcC
Q 024338           99 VDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKK-K-KGRIINIAS  163 (269)
Q Consensus        99 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~-~~~iv~isS  163 (269)
                      -+.+..-|++|.+||....      +.+.-.+.++.|+.-    .+.+.+.+.+. + ++.++++|-
T Consensus        74 ~~~~~daDvVVitAG~~~k------~g~tR~dll~~Na~i----~~~i~~~i~~~~~~~~iiivvsN  130 (323)
T TIGR01759        74 EEAFKDVDAALLVGAFPRK------PGMERADLLSKNGKI----FKEQGKALNKVAKKDVKVLVVGN  130 (323)
T ss_pred             HHHhCCCCEEEEeCCCCCC------CCCcHHHHHHHHHHH----HHHHHHHHHhhCCCCeEEEEeCC
Confidence            1222378999999997432      112345566666665    55555555443 3 677777764

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=94.85  E-value=0.32  Score=43.06  Aligned_cols=79  Identities=22%  Similarity=0.302  Sum_probs=50.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-cEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCC-HHHHHHHHHHHHHhc
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGC-KVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK-EADVESMIKTAVDAW  102 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~-~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~-~~~~~~~~~~~~~~~  102 (269)
                      .|+++||+|+ +++|...+......|+ +|+. +.+++++++.. +++   +.+.   ..|..+ .+++.+.+.++..  
T Consensus       185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~-~~~~~~~~~~a-~~~---Ga~~---~i~~~~~~~~~~~~v~~~~~--  253 (368)
T TIGR02818       185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIA-IDINPAKFELA-KKL---GATD---CVNPNDYDKPIQEVIVEITD--  253 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEE-EcCCHHHHHHH-HHh---CCCe---EEcccccchhHHHHHHHHhC--
Confidence            5799999986 8999999988888898 5665 56666655433 333   3321   123332 2233333433332  


Q ss_pred             CCccEEEEccCC
Q 024338          103 GTVDILINNAGI  114 (269)
Q Consensus       103 ~~id~li~~ag~  114 (269)
                      +++|++|.++|.
T Consensus       254 ~g~d~vid~~G~  265 (368)
T TIGR02818       254 GGVDYSFECIGN  265 (368)
T ss_pred             CCCCEEEECCCC
Confidence            369999999883

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=94.84  E-value=0.17  Score=45.21  Aligned_cols=73  Identities=18%  Similarity=0.272  Sum_probs=49.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHH-HHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKE-AEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~-~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      .+.|+++|+|++ .+|+.+++.+.+.|++++++ ..++.. .....+         ..+..|..|.+.+.+++++     
T Consensus        10 ~~~~~ilIiG~g-~~~~~~~~a~~~~G~~v~~~-~~~~~~~~~~~ad---------~~~~~~~~d~~~l~~~~~~-----   73 (395)
T PRK09288         10 PSATRVMLLGSG-ELGKEVAIEAQRLGVEVIAV-DRYANAPAMQVAH---------RSHVIDMLDGDALRAVIER-----   73 (395)
T ss_pred             CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEE-eCCCCCchHHhhh---------heEECCCCCHHHHHHHHHH-----
Confidence            356799999875 69999999999999999875 443321 111211         1456778887776666553     


Q ss_pred             CCccEEEEcc
Q 024338          103 GTVDILINNA  112 (269)
Q Consensus       103 ~~id~li~~a  112 (269)
                      .++|.++...
T Consensus        74 ~~id~vi~~~   83 (395)
T PRK09288         74 EKPDYIVPEI   83 (395)
T ss_pred             hCCCEEEEee
Confidence            2688887643

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=94.82  E-value=0.11  Score=41.11  Aligned_cols=43  Identities=37%  Similarity=0.568  Sum_probs=34.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHH
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIE   72 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~   72 (269)
                      +|.|.|+ |.+|..+|..|+..|++|.+ +.++++.+++..+.++
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l-~d~~~~~l~~~~~~i~   43 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTL-YDRSPEALERARKRIE   43 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEE-E-SSHHHHHHHHHHHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEE-EECChHHHHhhhhHHH
Confidence            4778888 89999999999999999999 5888887766555543

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=94.82  E-value=0.27  Score=43.51  Aligned_cols=78  Identities=19%  Similarity=0.280  Sum_probs=50.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCc-EEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCH-HHHHHHHHHHHHhc
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCK-VLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKE-ADVESMIKTAVDAW  102 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~-v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~-~~~~~~~~~~~~~~  102 (269)
                      .|.++||.|+ +++|...++.+...|+. |+. +.+++++.+.+ +++   +.+. +  .|..+. +++.+.+.++..  
T Consensus       186 ~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~-~~~~~~~~~~~-~~l---Ga~~-~--i~~~~~~~~~~~~v~~~~~--  254 (368)
T cd08300         186 PGSTVAVFGL-GAVGLAVIQGAKAAGASRIIG-IDINPDKFELA-KKF---GATD-C--VNPKDHDKPIQQVLVEMTD--  254 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEE-EeCCHHHHHHH-HHc---CCCE-E--EcccccchHHHHHHHHHhC--
Confidence            5899999985 89999999999899994 655 56776665433 333   3322 2  233332 234444444433  


Q ss_pred             CCccEEEEccC
Q 024338          103 GTVDILINNAG  113 (269)
Q Consensus       103 ~~id~li~~ag  113 (269)
                      +++|++|.+.|
T Consensus       255 ~g~d~vid~~g  265 (368)
T cd08300         255 GGVDYTFECIG  265 (368)
T ss_pred             CCCcEEEECCC
Confidence            37999999987

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=94.81  E-value=0.085  Score=42.57  Aligned_cols=72  Identities=19%  Similarity=0.287  Sum_probs=48.4

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHc-----------CCcEEEEEccCCCHHHHHHHHHH
Q 024338           29 AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS-----------GGQALTFGGDVSKEADVESMIKT   97 (269)
Q Consensus        29 vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~-----------~~~~~~~~~Dls~~~~~~~~~~~   97 (269)
                      ....||+|.||.+++++|++.|++|++-.+|.++..+...+.+...           ..++.++..-+   +.+...+.+
T Consensus         3 ~~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~i~~~~~~dA~~~aDVVvLAVP~---~a~~~v~~~   79 (211)
T COG2085           3 IIAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPLITGGSNEDAAALADVVVLAVPF---EAIPDVLAE   79 (211)
T ss_pred             EEEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccccccCChHHHHhcCCEEEEeccH---HHHHhHHHH
Confidence            3456778899999999999999999995566676666666665321           23444443333   445566667


Q ss_pred             HHHhcC
Q 024338           98 AVDAWG  103 (269)
Q Consensus        98 ~~~~~~  103 (269)
                      +.+.++
T Consensus        80 l~~~~~   85 (211)
T COG2085          80 LRDALG   85 (211)
T ss_pred             HHHHhC
Confidence            766654

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=94.81  E-value=0.091  Score=43.03  Aligned_cols=43  Identities=30%  Similarity=0.450  Sum_probs=36.2

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHH
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEI   71 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l   71 (269)
                      ++.|+||+|.+|.++++.|++.|++|.+ ..|+++..+++.+..
T Consensus         2 kI~IIGG~G~mG~ala~~L~~~G~~V~v-~~r~~~~~~~l~~~~   44 (219)
T TIGR01915         2 KIAVLGGTGDQGKGLALRLAKAGNKIII-GSRDLEKAEEAAAKA   44 (219)
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCEEEE-EEcCHHHHHHHHHHH
Confidence            4889999999999999999999999887 588887777665543

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PLN02306 hydroxypyruvate reductase

Probab=94.77  E-value=0.18  Score=45.03  Aligned_cols=38  Identities=18%  Similarity=0.128  Sum_probs=31.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHH-HcCCcEEEEecCCH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLG-KAGCKVLVNYARSS   61 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~-~~G~~v~i~~~r~~   61 (269)
                      .++.||++.|.|.. .||+++|+.+. ..|++|+.. ++..
T Consensus       161 ~~L~gktvGIiG~G-~IG~~vA~~l~~~fGm~V~~~-d~~~  199 (386)
T PLN02306        161 NLLKGQTVGVIGAG-RIGSAYARMMVEGFKMNLIYY-DLYQ  199 (386)
T ss_pred             cCCCCCEEEEECCC-HHHHHHHHHHHhcCCCEEEEE-CCCC
Confidence            46899999999864 99999999986 789998874 5543

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=94.77  E-value=0.62  Score=41.07  Aligned_cols=74  Identities=22%  Similarity=0.280  Sum_probs=46.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      .|++++|.| .+++|..++......|++++++ .+++++.....+.+   +... .+  |-.+.+.+       .+..++
T Consensus       180 ~g~~vlV~G-~G~vG~~av~~Ak~~G~~vi~~-~~~~~~~~~~~~~~---Ga~~-~i--~~~~~~~~-------~~~~~~  244 (357)
T PLN02514        180 SGLRGGILG-LGGVGHMGVKIAKAMGHHVTVI-SSSDKKREEALEHL---GADD-YL--VSSDAAEM-------QEAADS  244 (357)
T ss_pred             CCCeEEEEc-ccHHHHHHHHHHHHCCCeEEEE-eCCHHHHHHHHHhc---CCcE-Ee--cCCChHHH-------HHhcCC
Confidence            678999996 5899999998888899988774 45555444443332   3322 11  22232222       222246


Q ss_pred             ccEEEEccC
Q 024338          105 VDILINNAG  113 (269)
Q Consensus       105 id~li~~ag  113 (269)
                      +|++|.+.|
T Consensus       245 ~D~vid~~g  253 (357)
T PLN02514        245 LDYIIDTVP  253 (357)
T ss_pred             CcEEEECCC
Confidence            999999987

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=94.69  E-value=0.49  Score=41.40  Aligned_cols=89  Identities=15%  Similarity=0.226  Sum_probs=52.7

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHH---HHHHH--cCCcEEEEEccCCCHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVC---KEIEA--SGGQALTFGGDVSKEADVESMI   95 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~---~~l~~--~~~~~~~~~~Dls~~~~~~~~~   95 (269)
                      ...++|+++.|.|. |.||.++|+.+...|++|++ .++++.......   ..+.+  ..+++.++.+-++.  +...++
T Consensus       141 ~~~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~-~d~~~~~~~~~~~~~~~l~ell~~aDiVil~lP~t~--~t~~li  216 (330)
T PRK12480        141 SKPVKNMTVAIIGT-GRIGAATAKIYAGFGATITA-YDAYPNKDLDFLTYKDSVKEAIKDADIISLHVPANK--ESYHLF  216 (330)
T ss_pred             ccccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEE-EeCChhHhhhhhhccCCHHHHHhcCCEEEEeCCCcH--HHHHHH
Confidence            35789999999987 57999999999999999988 466554322111   11111  13455555555553  223333


Q ss_pred             -HHHHHhcCCccEEEEccCC
Q 024338           96 -KTAVDAWGTVDILINNAGI  114 (269)
Q Consensus        96 -~~~~~~~~~id~li~~ag~  114 (269)
                       ++..... +.+.++-|.+.
T Consensus       217 ~~~~l~~m-k~gavlIN~aR  235 (330)
T PRK12480        217 DKAMFDHV-KKGAILVNAAR  235 (330)
T ss_pred             hHHHHhcC-CCCcEEEEcCC
Confidence             2333332 34556556554

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.67  E-value=0.066  Score=45.88  Aligned_cols=39  Identities=33%  Similarity=0.399  Sum_probs=34.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSS   61 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~   61 (269)
                      -+++||.+.|.|.++-+|+.++..|.++|+.|.+. .+..
T Consensus       155 i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~-~~~t  193 (301)
T PRK14194        155 GDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVV-HSRS  193 (301)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEE-CCCC
Confidence            47899999999999999999999999999999984 4443

>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase

Probab=94.65  E-value=0.68  Score=40.89  Aligned_cols=78  Identities=24%  Similarity=0.403  Sum_probs=47.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      .+++++|.|+ +++|..++......|+++++.+.+++++.+ +.+++   +.+ .++  |-.+. +..+.+.+..  -.+
T Consensus       186 ~g~~vlI~g~-g~vG~~~~~la~~~G~~~v~~~~~~~~k~~-~~~~~---g~~-~~i--~~~~~-~~~~~v~~~~--~~~  254 (365)
T cd08278         186 PGSSIAVFGA-GAVGLAAVMAAKIAGCTTIIAVDIVDSRLE-LAKEL---GAT-HVI--NPKEE-DLVAAIREIT--GGG  254 (365)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHH-HHHHc---CCc-EEe--cCCCc-CHHHHHHHHh--CCC
Confidence            5799999974 899999888888899974544566665543 33333   322 122  22221 2222222222  236


Q ss_pred             ccEEEEccC
Q 024338          105 VDILINNAG  113 (269)
Q Consensus       105 id~li~~ag  113 (269)
                      +|.++.+.|
T Consensus       255 ~d~vld~~g  263 (365)
T cd08278         255 VDYALDTTG  263 (365)
T ss_pred             CcEEEECCC
Confidence            999999987

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=94.65  E-value=0.093  Score=46.77  Aligned_cols=101  Identities=19%  Similarity=0.150  Sum_probs=59.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHc-CCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKA-GCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~-G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      +.+.+.|.||+|.+|.++.+.|.++ +.++..+ .++....+.+.+.    ..  .....|+.+.++++..      .+.
T Consensus        37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l-~s~~saG~~i~~~----~~--~l~~~~~~~~~~~~~~------~~~  103 (381)
T PLN02968         37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVM-TADRKAGQSFGSV----FP--HLITQDLPNLVAVKDA------DFS  103 (381)
T ss_pred             cccEEEEECCCChHHHHHHHHHHhCCCCeEEEE-EChhhcCCCchhh----Cc--cccCccccceecCCHH------Hhc
Confidence            3468999999999999999999999 6777775 4433322222111    11  1122343333333221      123


Q ss_pred             CccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcc
Q 024338          104 TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVG  166 (269)
Q Consensus       104 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  166 (269)
                      .+|++|.+.+-.                          ..+.+.|.|.  .+.+||-.|+..=
T Consensus       104 ~~DvVf~Alp~~--------------------------~s~~i~~~~~--~g~~VIDlSs~fR  138 (381)
T PLN02968        104 DVDAVFCCLPHG--------------------------TTQEIIKALP--KDLKIVDLSADFR  138 (381)
T ss_pred             CCCEEEEcCCHH--------------------------HHHHHHHHHh--CCCEEEEcCchhc
Confidence            789999887521                          3555566652  3467888887653

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=94.63  E-value=0.41  Score=41.24  Aligned_cols=112  Identities=19%  Similarity=0.230  Sum_probs=66.8

Q ss_pred             EEEeCCCCchHHHHHHHHHHcC--CcEEEEecCCHHHHHHHHHHHHHcCCc---EEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           29 AVVTGASRGIGRAVATSLGKAG--CKVLVNYARSSKEAEEVCKEIEASGGQ---ALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        29 vlItGas~giG~~~a~~l~~~G--~~v~i~~~r~~~~~~~~~~~l~~~~~~---~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      +.|.|+ |++|..++..++..|  .++++ ++.+++.++....++.+....   ..+...  .|.    +.       +.
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l-~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~~----~~-------l~   65 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLASELVL-VDVNEEKAKGDALDLSHASAFLATGTIVRG--GDY----AD-------AA   65 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCCEEEE-EeCCccHHHHHHHhHHHhccccCCCeEEEC--CCH----HH-------hC
Confidence            357887 679999999999998  45555 677777777666666543221   111111  111    11       23


Q ss_pred             CccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-CCCCeEEEEcCCc
Q 024338          104 TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMK-KKKGRIINIASVV  165 (269)
Q Consensus       104 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~iv~isS~~  165 (269)
                      .-|++|.++|.....   ..+   -.+.+..|+.-    .+.+.+.+.+ .+++.++++|...
T Consensus        66 ~aDiVIitag~p~~~---~~~---R~~l~~~n~~i----~~~~~~~i~~~~p~~~viv~sNP~  118 (300)
T cd00300          66 DADIVVITAGAPRKP---GET---RLDLINRNAPI----LRSVITNLKKYGPDAIILVVSNPV  118 (300)
T ss_pred             CCCEEEEcCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHHHhCCCeEEEEccChH
Confidence            789999999974321   122   23444445443    5555555543 3577888887543

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>PRK13256 thiopurine S-methyltransferase; Reviewed

Probab=94.58  E-value=0.76  Score=37.84  Aligned_cols=127  Identities=12%  Similarity=0.125  Sum_probs=76.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHH-------------HcCCcEEEEEccCCCHHHH
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIE-------------ASGGQALTFGGDVSKEADV   91 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~-------------~~~~~~~~~~~Dls~~~~~   91 (269)
                      ++.+|||-|+..|.=   +..|+++|++|+. +.-++...+++.++..             ..+.++.++.+|+-+...-
T Consensus        43 ~~~rvLvPgCGkg~D---~~~LA~~G~~V~G-vDlS~~Ai~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~gD~f~l~~~  118 (226)
T PRK13256         43 DSSVCLIPMCGCSID---MLFFLSKGVKVIG-IELSEKAVLSFFSQNTINYEVIHGNDYKLYKGDDIEIYVADIFNLPKI  118 (226)
T ss_pred             CCCeEEEeCCCChHH---HHHHHhCCCcEEE-EecCHHHHHHHHHHcCCCcceecccccceeccCceEEEEccCcCCCcc
Confidence            467999999987643   6678999999988 4777777766655321             1245788899999875321


Q ss_pred             HHHHHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCC
Q 024338           92 ESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNI  171 (269)
Q Consensus        92 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~  171 (269)
                      .       +..+++|.|+-.+.+..-      +.+.-.+.           ++.+...+  +++|+++.++=  ......
T Consensus       119 ~-------~~~~~fD~VyDra~~~Al------pp~~R~~Y-----------~~~l~~lL--~pgg~llll~~--~~~~~~  170 (226)
T PRK13256        119 A-------NNLPVFDIWYDRGAYIAL------PNDLRTNY-----------AKMMLEVC--SNNTQILLLVM--EHDKKS  170 (226)
T ss_pred             c-------cccCCcCeeeeehhHhcC------CHHHHHHH-----------HHHHHHHh--CCCcEEEEEEE--ecCCCC
Confidence            1       122478888777665432      33333332           33344444  45667666642  112234


Q ss_pred             CChhhHHhHHHH
Q 024338          172 GQANYSAAKAGV  183 (269)
Q Consensus       172 ~~~~Y~~sK~al  183 (269)
                      +.++|+.+...+
T Consensus       171 ~GPPf~v~~~e~  182 (226)
T PRK13256        171 QTPPYSVTQAEL  182 (226)
T ss_pred             CCCCCcCCHHHH
Confidence            566777777544

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=94.57  E-value=0.065  Score=39.48  Aligned_cols=34  Identities=18%  Similarity=0.254  Sum_probs=26.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcC-CcEEEEecCCH
Q 024338           28 VAVVTGASRGIGRAVATSLGKAG-CKVLVNYARSS   61 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G-~~v~i~~~r~~   61 (269)
                      ++.|+||+|-+|.++++.|.++- ++++.+++++.
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~   35 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSR   35 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTT
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeecc
Confidence            47899999999999999999863 55555556655

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PLN02740 Alcohol dehydrogenase-like

Probab=94.57  E-value=0.3  Score=43.45  Aligned_cols=79  Identities=22%  Similarity=0.268  Sum_probs=50.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCc-EEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCH-HHHHHHHHHHHHhc
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCK-VLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKE-ADVESMIKTAVDAW  102 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~-v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~-~~~~~~~~~~~~~~  102 (269)
                      .|+++||.|+ |++|..++..+...|+. |++ +.+++++++.. +++   +.+. ++  |..+. ++..+.+.++..  
T Consensus       198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~-~~~~~~r~~~a-~~~---Ga~~-~i--~~~~~~~~~~~~v~~~~~--  266 (381)
T PLN02740        198 AGSSVAIFGL-GAVGLAVAEGARARGASKIIG-VDINPEKFEKG-KEM---GITD-FI--NPKDSDKPVHERIREMTG--  266 (381)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCCcEEE-EcCChHHHHHH-HHc---CCcE-EE--ecccccchHHHHHHHHhC--
Confidence            5789999986 89999999988899985 666 46666655433 333   3322 22  33322 123333333332  


Q ss_pred             CCccEEEEccCC
Q 024338          103 GTVDILINNAGI  114 (269)
Q Consensus       103 ~~id~li~~ag~  114 (269)
                      +.+|++|.+.|.
T Consensus       267 ~g~dvvid~~G~  278 (381)
T PLN02740        267 GGVDYSFECAGN  278 (381)
T ss_pred             CCCCEEEECCCC
Confidence            269999999983

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=94.55  E-value=0.25  Score=42.63  Aligned_cols=79  Identities=24%  Similarity=0.385  Sum_probs=49.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      .++.+++|.|+++.+|..++......|+.++.+ .++++..+.+ +++   +.+ .++  |..+ .+..+.+.+...  .
T Consensus       138 ~~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~-~~~~~~~~~~-~~~---g~~-~v~--~~~~-~~~~~~~~~~~~--~  206 (329)
T cd08250         138 KSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGT-CSSDEKAEFL-KSL---GCD-RPI--NYKT-EDLGEVLKKEYP--K  206 (329)
T ss_pred             CCCCEEEEEeCccHHHHHHHHHHHHcCCeEEEE-eCcHHHHHHH-HHc---CCc-eEE--eCCC-ccHHHHHHHhcC--C
Confidence            357899999999999999999888999998774 5665544433 332   321 122  2222 223333333222  3


Q ss_pred             CccEEEEccC
Q 024338          104 TVDILINNAG  113 (269)
Q Consensus       104 ~id~li~~ag  113 (269)
                      ++|.++++.|
T Consensus       207 ~vd~v~~~~g  216 (329)
T cd08250         207 GVDVVYESVG  216 (329)
T ss_pred             CCeEEEECCc
Confidence            6999998876

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PRK14851 hypothetical protein; Provisional

Probab=94.53  E-value=0.28  Score=47.07  Aligned_cols=84  Identities=8%  Similarity=0.200  Sum_probs=55.0

Q ss_pred             ccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCH-------------------HHHHHHHHHHHHcC--CcE
Q 024338           20 AAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSS-------------------KEAEEVCKEIEASG--GQA   78 (269)
Q Consensus        20 ~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~-------------------~~~~~~~~~l~~~~--~~~   78 (269)
                      ....+++++|+|.|+ ||+|..+++.|+..|..-+.+++.+.                   .+.+..++.+++.+  .++
T Consensus        37 ~Q~kL~~~~VlIvG~-GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I  115 (679)
T PRK14851         37 EQERLAEAKVAIPGM-GGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEI  115 (679)
T ss_pred             HHHHHhcCeEEEECc-CHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeE
Confidence            335688999999995 59999999999999977555444321                   23344455555443  456


Q ss_pred             EEEEccCCCHHHHHHHHHHHHHhcCCccEEEEcc
Q 024338           79 LTFGGDVSKEADVESMIKTAVDAWGTVDILINNA  112 (269)
Q Consensus        79 ~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~a  112 (269)
                      ..+...++ .+.+.++++       .+|+||.+.
T Consensus       116 ~~~~~~i~-~~n~~~~l~-------~~DvVid~~  141 (679)
T PRK14851        116 TPFPAGIN-ADNMDAFLD-------GVDVVLDGL  141 (679)
T ss_pred             EEEecCCC-hHHHHHHHh-------CCCEEEECC
Confidence            66666775 344555544       678877655

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=94.48  E-value=0.27  Score=42.06  Aligned_cols=77  Identities=21%  Similarity=0.323  Sum_probs=48.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      -+|.+++|.|+++++|..+++.....|+.++.+ .+++++.+.+ .++   +.+. ++. +  .. +..+.+.+.   -.
T Consensus       141 ~~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~-~~~~~~~~~~-~~~---g~~~-~~~-~--~~-~~~~~i~~~---~~  207 (320)
T cd08243         141 QPGDTLLIRGGTSSVGLAALKLAKALGATVTAT-TRSPERAALL-KEL---GADE-VVI-D--DG-AIAEQLRAA---PG  207 (320)
T ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHcCCEEEEE-eCCHHHHHHH-Hhc---CCcE-EEe-c--Cc-cHHHHHHHh---CC
Confidence            357999999999999999999999999998774 5555544333 332   3221 121 1  11 222222222   23


Q ss_pred             CccEEEEccC
Q 024338          104 TVDILINNAG  113 (269)
Q Consensus       104 ~id~li~~ag  113 (269)
                      ++|.++++.|
T Consensus       208 ~~d~vl~~~~  217 (320)
T cd08243         208 GFDKVLELVG  217 (320)
T ss_pred             CceEEEECCC
Confidence            6999999886

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=94.48  E-value=0.19  Score=42.50  Aligned_cols=84  Identities=19%  Similarity=0.266  Sum_probs=64.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      +|-++.--||++++|+++.+.....|.+-+= +.|+++..+++.+.|+..+....+-.-.+.+.     -........++
T Consensus       160 ~GD~vIQNganS~VG~~ViQlaka~Giktin-vVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~-----~~~k~~~~~~~  233 (354)
T KOG0025|consen  160 KGDSVIQNGANSGVGQAVIQLAKALGIKTIN-VVRDRPNIEELKKQLKSLGATEVITEEELRDR-----KMKKFKGDNPR  233 (354)
T ss_pred             CCCeeeecCcccHHHHHHHHHHHHhCcceEE-EeecCccHHHHHHHHHHcCCceEecHHHhcch-----hhhhhhccCCC
Confidence            4778999999999999999999999999765 47899999999999998776654443333332     23333335678


Q ss_pred             ccEEEEccCC
Q 024338          105 VDILINNAGI  114 (269)
Q Consensus       105 id~li~~ag~  114 (269)
                      +..-+||.|.
T Consensus       234 prLalNcVGG  243 (354)
T KOG0025|consen  234 PRLALNCVGG  243 (354)
T ss_pred             ceEEEeccCc
Confidence            9999999985

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=94.47  E-value=0.26  Score=41.94  Aligned_cols=41  Identities=24%  Similarity=0.354  Sum_probs=33.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHH
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAE   65 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~   65 (269)
                      ..|++++|+|+++++|..++..+...|+.++.+ .++.+..+
T Consensus       138 ~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~-~~~~~~~~  178 (323)
T cd08241         138 QPGETVLVLGAAGGVGLAAVQLAKALGARVIAA-ASSEEKLA  178 (323)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhCCEEEEE-eCCHHHHH
Confidence            357999999999999999999999999998774 55554443

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=94.46  E-value=0.13  Score=43.63  Aligned_cols=45  Identities=27%  Similarity=0.336  Sum_probs=36.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHH
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEI   71 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l   71 (269)
                      +|+++|.|+ ||-+++++..|++.|+.-+.++.|+.++.+++.+.+
T Consensus       122 ~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~  166 (272)
T PRK12550        122 DLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELY  166 (272)
T ss_pred             CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh
Confidence            578999996 799999999999999874444799998888777654

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=94.45  E-value=0.53  Score=40.64  Aligned_cols=115  Identities=24%  Similarity=0.280  Sum_probs=64.7

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCc-EEEEecCCHHHHHHHHHHHHHc----CCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGCK-VLVNYARSSKEAEEVCKEIEAS----GGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~~-v~i~~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      .|.|+|+ |++|.+++..|+.++.. -+++.+.+++..+-...++...    ..+. .+..| .+.+           .+
T Consensus         2 KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~-~i~~~-~~y~-----------~~   67 (313)
T COG0039           2 KVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDV-KITGD-GDYE-----------DL   67 (313)
T ss_pred             eEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCce-EEecC-CChh-----------hh
Confidence            5889999 99999999999888744 3444577754444333333321    1111 12222 1111           11


Q ss_pred             CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCc
Q 024338          103 GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVV  165 (269)
Q Consensus       103 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  165 (269)
                      .+-|++|-.||......   +   +-.+.++.|..=.-.+.+.+.+.   ..++.++.+|--.
T Consensus        68 ~~aDiVvitAG~prKpG---m---tR~DLl~~Na~I~~~i~~~i~~~---~~d~ivlVvtNPv  121 (313)
T COG0039          68 KGADIVVITAGVPRKPG---M---TRLDLLEKNAKIVKDIAKAIAKY---APDAIVLVVTNPV  121 (313)
T ss_pred             cCCCEEEEeCCCCCCCC---C---CHHHHHHhhHHHHHHHHHHHHhh---CCCeEEEEecCcH
Confidence            37899999998754321   2   33455666666544444444332   3456777776543

>PRK07411 hypothetical protein; Validated

Probab=94.42  E-value=0.36  Score=43.23  Aligned_cols=37  Identities=19%  Similarity=0.271  Sum_probs=30.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecC
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYAR   59 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r   59 (269)
                      ..+++.+|+|.|++ |+|..+++.|+..|..-+.+++.
T Consensus        34 ~~L~~~~VlivG~G-GlG~~va~~La~~Gvg~l~lvD~   70 (390)
T PRK07411         34 KRLKAASVLCIGTG-GLGSPLLLYLAAAGIGRIGIVDF   70 (390)
T ss_pred             HHHhcCcEEEECCC-HHHHHHHHHHHHcCCCEEEEECC
Confidence            46788999999886 99999999999999876654444

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=94.39  E-value=0.46  Score=41.89  Aligned_cols=105  Identities=19%  Similarity=0.245  Sum_probs=63.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc-
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW-  102 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~-  102 (269)
                      ..+.+++|+|+. .||...+..+...|+..++...+++++++...+..   +.....   +... +   ....++.+.. 
T Consensus       167 ~~~~~V~V~GaG-pIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~---g~~~~~---~~~~-~---~~~~~~~~~t~  235 (350)
T COG1063         167 RPGGTVVVVGAG-PIGLLAIALAKLLGASVVIVVDRSPERLELAKEAG---GADVVV---NPSE-D---DAGAEILELTG  235 (350)
T ss_pred             CCCCEEEEECCC-HHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhC---CCeEee---cCcc-c---cHHHHHHHHhC
Confidence            344489999875 89999988888899887877788888776443322   121111   1111 1   2222332322 


Q ss_pred             C-CccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcc
Q 024338          103 G-TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVG  166 (269)
Q Consensus       103 ~-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  166 (269)
                      + ..|++|-++|...                         .++.++...  ++.|++++++-...
T Consensus       236 g~g~D~vie~~G~~~-------------------------~~~~ai~~~--r~gG~v~~vGv~~~  273 (350)
T COG1063         236 GRGADVVIEAVGSPP-------------------------ALDQALEAL--RPGGTVVVVGVYGG  273 (350)
T ss_pred             CCCCCEEEECCCCHH-------------------------HHHHHHHHh--cCCCEEEEEeccCC
Confidence            3 5999999999211                         233344443  67889998865433

>PLN02602 lactate dehydrogenase

Probab=94.34  E-value=0.52  Score=41.55  Aligned_cols=114  Identities=11%  Similarity=0.108  Sum_probs=66.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-cEEEEecCCHHHHHHHHHHHHHcC---CcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGC-KVLVNYARSSKEAEEVCKEIEASG---GQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~-~v~i~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      +.+.|+|+ |.+|..++..++..|. .-+++++.+++.++....++....   .... +..+ .+.+       .    +
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~-i~~~-~dy~-------~----~  103 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTK-ILAS-TDYA-------V----T  103 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCE-EEeC-CCHH-------H----h
Confidence            68999996 8999999999998874 334446777766655555554321   1111 2110 1211       1    2


Q ss_pred             CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-CCCCeEEEEcCC
Q 024338          103 GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMK-KKKGRIINIASV  164 (269)
Q Consensus       103 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~iv~isS~  164 (269)
                      ..-|++|.+||.....   ..+.   .+.+..|..-    .+.+.+.+.+ ..++.++++|--
T Consensus       104 ~daDiVVitAG~~~k~---g~tR---~dll~~N~~I----~~~i~~~I~~~~p~~ivivvtNP  156 (350)
T PLN02602        104 AGSDLCIVTAGARQIP---GESR---LNLLQRNVAL----FRKIIPELAKYSPDTILLIVSNP  156 (350)
T ss_pred             CCCCEEEECCCCCCCc---CCCH---HHHHHHHHHH----HHHHHHHHHHHCCCeEEEEecCc
Confidence            3789999999975321   1222   3445555543    5555555543 456778888753

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=94.34  E-value=0.41  Score=41.23  Aligned_cols=80  Identities=15%  Similarity=0.257  Sum_probs=49.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      .+.+++|.|+++++|..+++.+...|+.+++ +.++++..+.+ .+   .+.+. ++  |..+.+...+.+.+... -.+
T Consensus       140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~-~~~~~~~~~~~-~~---~g~~~-~~--~~~~~~~~~~~~~~~~~-~~~  210 (334)
T PTZ00354        140 KGQSVLIHAGASGVGTAAAQLAEKYGAATII-TTSSEEKVDFC-KK---LAAII-LI--RYPDEEGFAPKVKKLTG-EKG  210 (334)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEE-EeCCHHHHHHH-HH---cCCcE-EE--ecCChhHHHHHHHHHhC-CCC
Confidence            5789999999999999999999999999877 46666555443 22   23321 12  22222212222222211 125


Q ss_pred             ccEEEEccC
Q 024338          105 VDILINNAG  113 (269)
Q Consensus       105 id~li~~ag  113 (269)
                      +|.++++.|
T Consensus       211 ~d~~i~~~~  219 (334)
T PTZ00354        211 VNLVLDCVG  219 (334)
T ss_pred             ceEEEECCc
Confidence            999999876

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=94.33  E-value=0.2  Score=42.98  Aligned_cols=80  Identities=20%  Similarity=0.308  Sum_probs=49.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      ..+.+++|.|+++++|.++++.+...|++++++ .++.++.+.+ +++   +.+. ++  |..+.+ ..+.+.+... ..
T Consensus       137 ~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~-~~~~~~~~~~-~~~---g~~~-~~--~~~~~~-~~~~~~~~~~-~~  206 (323)
T cd05282         137 PPGDWVIQNAANSAVGRMLIQLAKLLGFKTINV-VRRDEQVEEL-KAL---GADE-VI--DSSPED-LAQRVKEATG-GA  206 (323)
T ss_pred             CCCCEEEEcccccHHHHHHHHHHHHCCCeEEEE-ecChHHHHHH-Hhc---CCCE-Ee--cccchh-HHHHHHHHhc-CC
Confidence            357899999999999999999999999998874 5555444333 332   3221 11  222222 2222222211 12


Q ss_pred             CccEEEEccC
Q 024338          104 TVDILINNAG  113 (269)
Q Consensus       104 ~id~li~~ag  113 (269)
                      ++|.++.+.|
T Consensus       207 ~~d~vl~~~g  216 (323)
T cd05282         207 GARLALDAVG  216 (323)
T ss_pred             CceEEEECCC
Confidence            6999999887

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=94.32  E-value=0.93  Score=39.21  Aligned_cols=110  Identities=14%  Similarity=0.204  Sum_probs=63.7

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcC--CcEEEEecCCHHHHHHHHHHHHHcC---CcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           28 VAVVTGASRGIGRAVATSLGKAG--CKVLVNYARSSKEAEEVCKEIEASG---GQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G--~~v~i~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      .+.|.|+ |.+|..++..|+.+|  .++++ ++++++..+.....+....   ....+..   .+.+           .+
T Consensus         2 kI~IIGa-G~VG~~~a~~l~~~g~~~ev~l-~D~~~~~~~g~a~dl~~~~~~~~~~~i~~---~d~~-----------~l   65 (308)
T cd05292           2 KVAIVGA-GFVGSTTAYALLLRGLASEIVL-VDINKAKAEGEAMDLAHGTPFVKPVRIYA---GDYA-----------DC   65 (308)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCCEEEE-EECCchhhhhHHHHHHccccccCCeEEee---CCHH-----------Hh
Confidence            4789998 799999999999999  34555 6887766553333333211   1111111   1211           12


Q ss_pred             CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-CCCCeEEEEcC
Q 024338          103 GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMK-KKKGRIINIAS  163 (269)
Q Consensus       103 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~iv~isS  163 (269)
                      ...|++|.+++.....   .   ....+.+..|..-    .+.+.+.+.+ .+++.+++++.
T Consensus        66 ~~aDiViita~~~~~~---~---~~r~dl~~~n~~i----~~~~~~~l~~~~~~giiiv~tN  117 (308)
T cd05292          66 KGADVVVITAGANQKP---G---ETRLDLLKRNVAI----FKEIIPQILKYAPDAILLVVTN  117 (308)
T ss_pred             CCCCEEEEccCCCCCC---C---CCHHHHHHHHHHH----HHHHHHHHHHHCCCeEEEEecC
Confidence            3789999999964321   1   1233445555554    4445554433 35677777765

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=94.27  E-value=0.044  Score=39.19  Aligned_cols=38  Identities=24%  Similarity=0.238  Sum_probs=30.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSS   61 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~   61 (269)
                      .+++||.+||+|+ |.+|..=++.|++.|+++.++ +...
T Consensus         3 l~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vi-s~~~   40 (103)
T PF13241_consen    3 LDLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVI-SPEI   40 (103)
T ss_dssp             E--TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEE-ESSE
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEE-CCch
Confidence            4689999999999 799999999999999999995 4443

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=94.27  E-value=0.22  Score=42.33  Aligned_cols=80  Identities=18%  Similarity=0.264  Sum_probs=49.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      .+|++++|.|+++++|..+++.....|+.++.+ .+++++.+.+ .+   .+.+. ++..  .+ .+..+.+.+... -.
T Consensus       135 ~~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~-~~~~~~~~~~-~~---~g~~~-~~~~--~~-~~~~~~~~~~~~-~~  204 (320)
T cd05286         135 KPGDTVLVHAAAGGVGLLLTQWAKALGATVIGT-VSSEEKAELA-RA---AGADH-VINY--RD-EDFVERVREITG-GR  204 (320)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEE-cCCHHHHHHH-HH---CCCCE-EEeC--Cc-hhHHHHHHHHcC-CC
Confidence            367999999999999999999999999998774 5565554433 32   23221 2221  12 222222222211 12


Q ss_pred             CccEEEEccC
Q 024338          104 TVDILINNAG  113 (269)
Q Consensus       104 ~id~li~~ag  113 (269)
                      ++|.++++.+
T Consensus       205 ~~d~vl~~~~  214 (320)
T cd05286         205 GVDVVYDGVG  214 (320)
T ss_pred             CeeEEEECCC
Confidence            5999999876

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>PRK13243 glyoxylate reductase; Reviewed

Probab=94.24  E-value=0.31  Score=42.70  Aligned_cols=38  Identities=29%  Similarity=0.399  Sum_probs=33.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSS   61 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~   61 (269)
                      .+++||++.|.|. |.||+++|+.+...|++|++ +.|+.
T Consensus       146 ~~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~-~d~~~  183 (333)
T PRK13243        146 YDVYGKTIGIIGF-GRIGQAVARRAKGFGMRILY-YSRTR  183 (333)
T ss_pred             cCCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEE-ECCCC
Confidence            5789999999998 79999999999999999887 46654

>PRK06141 ornithine cyclodeaminase; Validated

Probab=94.23  E-value=0.54  Score=40.81  Aligned_cols=75  Identities=24%  Similarity=0.319  Sum_probs=51.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHH-cC-CcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGK-AG-CKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~-~G-~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      +...++++|.|+ |+.|+..++.++. ++ .++.+ ..|++++.+++.+++++.+..+..    .   ++.++++.    
T Consensus       122 ~~~~~~v~iiG~-G~~a~~~~~al~~~~~~~~V~V-~~Rs~~~a~~~a~~~~~~g~~~~~----~---~~~~~av~----  188 (314)
T PRK06141        122 RKDASRLLVVGT-GRLASLLALAHASVRPIKQVRV-WGRDPAKAEALAAELRAQGFDAEV----V---TDLEAAVR----  188 (314)
T ss_pred             CCCCceEEEECC-cHHHHHHHHHHHhcCCCCEEEE-EcCCHHHHHHHHHHHHhcCCceEE----e---CCHHHHHh----
Confidence            345789999995 8999999997775 56 45555 699999999999888654322222    1   22333333    


Q ss_pred             hcCCccEEEEccC
Q 024338          101 AWGTVDILINNAG  113 (269)
Q Consensus       101 ~~~~id~li~~ag  113 (269)
                         .-|+||++..
T Consensus       189 ---~aDIVi~aT~  198 (314)
T PRK06141        189 ---QADIISCATL  198 (314)
T ss_pred             ---cCCEEEEeeC
Confidence               6799877765

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	269
1edo_A	244	The X-Ray Structure Of Beta-Keto Acyl Carrier Prote		1e-110
4dml_A	269	3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Syn		4e-77
2uvd_A	246	The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier		4e-73
3sj7_A	252	Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F		1e-68
2c07_A	285	Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng		8e-66
2hq1_A	247	Crystal Structure Of Orf 1438 A Putative GlucoseRIB		3e-65
3osu_A	246	Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro		1e-63
3rsh_A	251	Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc		4e-60
3tzc_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-59
3tzk_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-59
3u09_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-59
3tzh_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		6e-59
1i01_A	244	Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr		1e-57
2pnf_A	248	Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-		1e-57
1q7c_A	244	The Structure Of Betaketoacyl-[acp] Reductase Y151f		3e-57
2ph3_A	245	Crystal Structure Of 3-oxoacyl-[acyl Carrier Protei		3e-56
3op4_A	248	Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr		3e-55
3ftp_A	270	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		4e-53
4afn_A	269	Crystal Structure Of 3-ketoacyl-(acyl-carrier-prote		8e-53
3f9i_A	249	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-50
3emk_A	246	2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		8e-49
3enn_A	249	2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		9e-49
2nm0_A	253	Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl		2e-48
3grp_A	266	2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-		4e-48
4iin_A	271	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		6e-48
2cf2_E	226	Architecture Of Mammalian Fatty Acid Synthase Lengt		7e-48
3lyl_A	247	Structure Of 3-Oxoacyl-Acylcarrier Protein Reductas		1e-46
3gk3_A	269	Crystal Structure Of Acetoacetyl-Coa Reductase From		6e-44
3aus_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		1e-42
3ay7_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		1e-42
3ay6_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		1e-42
2ntn_A	267	Crystal Structure Of Maba-c60v/g139a/s144l Length =		2e-41
1uzm_A	247	Maba From Mycobacterium Tuberculosis Length = 247		5e-41
2pd6_A	264	Structure Of Human Hydroxysteroid Dehydrogenase Typ		7e-41
1uzl_A	247	Maba From Mycobacterium Tuberculosis Length = 247		2e-40
4iiu_A	267	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		3e-40
1rwb_A	261	Cooperative Effect Of Two Surface Amino Acid Mutati		6e-40
3u5t_A	267	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		1e-39
1gee_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant Q		2e-39
1g6k_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant E		3e-39
1gco_A	261	Crystal Structure Of Glucose Dehydrogenase Complexe		4e-39
3ezl_A	256	Crystal Structure Of Acetyacetyl-Coa Reductase From		6e-39
2et6_A	604	(3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candid		6e-38
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		2e-37
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		2e-37
4hp8_A	247	Crystal Structure Of A Putative 2-Deoxy-D-Gluconate		3e-37
1w4z_A	281	Structure Of Actinorhodin Polyketide (Actiii) Reduc		3e-37
2rhr_B	277	P94l Actinorhodin Ketordeuctase Mutant, With Nadph		3e-37
3csd_B	281	Actinorhodin Polyketide Ketoreductase Mutant P94l B		3e-37
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		3e-37
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		1e-36
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		1e-36
1uls_A	245	Crystal Structure Of Tt0140 From Thermus Thermophil		7e-36
3r1i_A	276	Crystal Structure Of A Short-Chain Type Dehydrogena		1e-35
3uf0_A	273	Crystal Structure Of A Putative Nad(P) Dependent Gl		1e-35
3rih_A	293	Crystal Structure Of A Putative Short Chain Dehydro		2e-35
4g81_D	255	Crystal Structure Of A Hexonate Dehydrogenase Ortho		6e-35
4ibo_A	271	Crystal Structure Of A Putative Gluconate Dehydroge		7e-35
1vl8_A	267	Crystal Structure Of Gluconate 5-dehydrogenase (tm0		7e-35
3cxr_A	291	Crystal Structure Of Gluconate 5-Dehydrogase From S		2e-34
2ztm_A	260	T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase L		4e-34
2ztu_A	260	T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase C		8e-34
1wmb_A	260	Crystal Structure Of Nad Dependent D-3-Hydroxybutyl		8e-34
2yz7_A	260	X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase F		3e-33
3v2g_A	271	Crystal Structure Of A DehydrogenaseREDUCTASE FROM		1e-32
2q2q_A	255	Structure Of D-3-Hydroxybutyrate Dehydrogenase From		1e-32
3s55_A	281	Crystal Structure Of A Putative Short-Chain Dehydro		1e-32
3pk0_A	262	Crystal Structure Of Short-Chain DehydrogenaseREDUC		4e-32
4e3z_A	272	Crystal Structure Of A Oxidoreductase From Rhizobiu		5e-32
3sju_A	279	Hedamycin Polyketide Ketoreductase Bound To Nadph L		7e-32
3q6i_A	446	Crystal Structure Of Fabg4 And Coenzyme Binary Comp		8e-32
4fw8_A	454	Crystal Structure Of Fabg4 Complexed With Coenzyme		9e-32
3lls_A	475	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		9e-32
3m1l_A	432	Crystal Strucutre Of A C-Terminal Trunacted Mutant		9e-32
3v1t_C	462	Crystal Structure Of A Putative Ketoacyl Reductase		1e-31
3u0b_A	454	Crystal Structure Of An Oxidoreductase From Mycobac		2e-31
2b4q_A	276	Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex		2e-31
1ybv_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		5e-31
1doh_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		6e-31
3gaf_A	256	2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid De		8e-31
3oml_A	613	Structure Of Full-Length Peroxisomal Multifunctiona		1e-30
3vtz_A	269	Structure Of Thermoplasma Volcanium Aldohexose Dehy		3e-30
1geg_A	256	Cryatal Structure Analysis Of Meso-2,3-Butanediol D		4e-30
1x1e_A	239	Crystal Structure Of Tt0495 Protein From Thermus Th		4e-30
3is3_A	270	Crystal Structure Of 17beta-Hydroxysteroid Dehydrog		5e-30
1iy8_A	267	Crystal Structure Of Levodione Reductase Length = 2		7e-30
3v2h_A	281	The Crystal Structure Of D-Beta-Hydroxybutyrate Deh		8e-30
4iqg_C	271	Crystal Structure Of Bpro0239 Oxidoreductase From P		8e-30
1xq1_A	266	X-Ray Structure Of Putative Tropinone Reducatse Fro		8e-30
3ak4_A	263	Crystal Structure Of Nadh-Dependent Quinuclidinone		9e-30
3itd_A	270	Crystal Structure Of An Inactive 17beta-Hydroxyster		1e-29
2d1y_A	256	Crystal Structure Of Tt0321 From Thermus Thermophil		2e-29
4b79_A	242	The Aeropath Project And Pseudomonas Aeruginosa Hig		3e-29
3nug_A	247	Crystal Structure Of Wild Type Tetrameric Pyridoxal		4e-29
3qiv_A	253	Crystal Structure Of A Putative Short-Chain Dehydro		5e-29
3o4r_A	261	Crystal Structure Of Human DehydrogenaseREDUCTASE (		8e-29
1zbq_A	327	Crystal Structure Of Human 17-beta-hydroxysteroid D		1e-28
2cfc_A	250	Structural Basis For Stereo Selectivity In The (R)-		1e-28
3qlj_A	322	Crystal Structure Of A Short Chain Dehydrogenase Fr		1e-28
3ndr_A	247	Crystal Structure Of Tetrameric Pyridoxal 4-Dehydro		2e-28
1gz6_A	319	(3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat		3e-28
2wdz_A	254	Crystal Structure Of The Short Chain Dehydrogenase		4e-28
3imf_A	257	1.99 Angstrom Resolution Crystal Structure Of A Sho		4e-28
1yxm_A	303	Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa		5e-28
3icc_A	255	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Car		5e-28
2ew8_A	249	Crystal Structure Of The (s)-specific 1-phenylethan		6e-28
1u7t_A	261	Crystal Structure Of AbadHSD10 WITH A BOUND INHIBIT		7e-28
1nff_A	260	Crystal Structure Of Rv2002 Gene Product From Mycob		8e-28
3a28_C	258	Crystal Structure Of L-2,3-Butanediol Dehydrogenase		1e-27
3awd_A	260	Crystal Structure Of Gox2181 Length = 260		1e-27
1ahi_A	255	7 Alpha-Hydroxysteroid Dehydrogenase Complexed With		1e-27
2o23_A	265	The Structure Of Wild-Type Human Hadh2 (17beta-Hydr		2e-27
1so8_A	261	Abeta-bound Human Abad Structure [also Known As 3-h		2e-27
3oic_A	258	Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl		3e-27
4fn4_A	254	Short-chain Nad(h)-dependent Dehydrogenase/reductas		4e-27
3oec_A	317	Crystal Structure Of Carveol Dehydrogenase From Myc		5e-27
3ctm_A	279	Crystal Structure Of A Carbonyl Reductase From Cand		1e-26
1ipe_A	259	Tropinone Reductase-Ii Complexed With Nadph Length		1e-26
2ae2_A	260	Tropinone Reductase-Ii Complexed With Nadp+ And Pse		1e-26
1e6w_A	260	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		1e-26
1e3s_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		1e-26
1e3w_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		1e-26
1nfr_A	260	Rv2002 Gene Product From Mycobacterium Tuberculosis		2e-26
1ae1_A	273	Tropinone Reductase-I Complex With Nadp Length = 27		2e-26
2dtd_A	264	Structure Of Thermoplasma Acidophilum Aldohexose De		2e-26
2a4k_A	263	3-Oxoacyl-[acyl Carrier Protein] Reductase From The		2e-26
2zk7_A	257	Structure Of A C-Terminal Deletion Mutant Of Thermo		2e-26
2hsd_A	253	The Refined Three-Dimensional Structure Of 3alpha,2		3e-26
3gdf_A	267	Crystal Structure Of The Nadp-Dependent Mannitol De		3e-26
2zat_A	260	Crystal Structure Of A Mammalian Reductase Length =		1e-25
1k2w_A	256	Crystal Structure Of Sorbitol Dehydrogenase From R.		2e-25
3edm_A	259	Crystal Structure Of A Short Chain Dehydrogenase Fr		5e-25
3gvc_A	277	Crystal Structure Of Probable Short-Chain Dehydroge		5e-25
1hdc_A	254	Mechanism Of Inhibition Of 3alpha,20beta-Hydroxyste		8e-25
1spx_A	278	Crystal Structure Of Glucose Dehydrogenase Of Caeno		1e-24
4dqx_A	277	Crystal Structure Of A Short Chain Dehydrogenase Fr		1e-24
3tox_A	280	Crystal Structure Of A Short Chain Dehydrogenase In		1e-24
3i3o_A	291	2.06 Angstrom Resolution Crystal Structure Of A Sho		3e-24
3tl3_A	257	Structure Of A Short-Chain Type DehydrogenaseREDUCT		7e-24
3v8b_A	283	Crystal Structure Of A 3-Ketoacyl-Acp Reductase Fro		8e-24
1nxq_A	251	Crystal Structure Of R-Alcohol Dehydrogenase (Radh)		9e-24
3t7c_A	299	Crystal Structure Of Carveol Dehydrogenase From Myc		1e-23
3tzq_B	271	Crystal Structure Of A Short-Chain Type Dehydrogena		1e-23
3i4f_A	264	Structure Of Putative 3-oxoacyl-reductase From Baci		1e-23
1zjy_A	251	Structure Of R-Specific Alcohol Dehydrogenase (Muta		1e-23
3ijr_A	291	2.05 Angstrom Resolution Crystal Structure Of A Sho		1e-23
3bmc_A	288	Structure Of Pteridine Reductase 1 (Ptr1) From Tryp		3e-23
2z1n_A	260	Crystal Structure Of Ape0912 From Aeropyrum Pernix		3e-23
3jq7_A	288	Crystal Structure Of Pteridine Reductase 1 (Ptr1) F		3e-23
3bmc_B	288	Structure Of Pteridine Reductase 1 (Ptr1) From Tryp		3e-23
3jq7_B	288	Crystal Structure Of Pteridine Reductase 1 (Ptr1) F		4e-23
2c7v_A	268	Structure Of Trypanosoma Brucei Pteridine Reductase		4e-23
3rkr_A	262	Crystal Structure Of A Metagenomic Short-Chain Oxid		4e-23
2wd7_A	268	Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce		5e-23
2wd7_B	268	Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce		5e-23
1zem_A	262	Crystal Structure Of Nad+-Bound Xylitol Dehydrogena		1e-22
1xhl_A	297	Crystal Structure Of Putative Tropinone Reductase-I		2e-22
3tfo_A	264	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Car		3e-22
3r3s_A	294	Structure Of The Ygha Oxidoreductase From Salmonell		4e-22
3ai1_A	263	The Crystal Structure Of L-Sorbose Reductase From G		9e-22
3n74_A	261	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-21
4e6p_A	259	Crystal Structure Of A Probable Sorbitol Dehydrogen		1e-21
1mxh_A	276	Crystal Structure Of Substrate Complex Of Putative		2e-21
3ai3_A	263	The Crystal Structure Of L-Sorbose Reductase From G		4e-21
1ja9_A	274	Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalen		7e-21
1mxf_A	276	Crystal Structure Of Inhibitor Complex Of Putative		7e-21
4fc6_A	277	Studies On Dcr Shed New Light On Peroxisomal Beta-O		1e-20
1xg5_A	279	Structure Of Human Putative Dehydrogenase Mgc4172 I		2e-20
1h5q_A	265	Mannitol Dehydrogenase From Agaricus Bisporus Lengt		2e-20
1xkq_A	280	Crystal Structure Of Short-Chain DehydrogenaseREDUC		3e-20
2bd0_A	244	Chlorobium Tepidum Sepiapterin Reductase Complexed		3e-20
3t4x_A	267	Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDU		6e-20
3pgx_A	280	Crystal Structure Of A Putative Carveol Dehydrogena		6e-20
1o5i_A	249	Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei		1e-19
3o38_A	266	Crystal Structure Of A Short Chain Dehydrogenase Fr		2e-19
1p33_A	289	Pteridine Reductase From Leishmania Tarentolae Comp		2e-19
3sx2_A	278	Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Ca		4e-19
4imr_A	275	Crystal Structure Of 3-oxoacyl (acyl-carrier-protei		5e-19
2fwm_X	250	Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodih		7e-19
3afm_A	258	Crystal Structure Of Aldose Reductase A1-R Responsi		3e-18
1yde_A	270	Crystal Structure Of Human Retinal Short-Chain Dehy		3e-18
3un1_A	260	Crystal Structure Of An Oxidoreductase From Sinorhi		4e-18
2ehd_A	234	Crystal Structure Analysis Of Oxidoreductase Length		4e-18
3ged_A	247	Fingerprint And Structural Analysis Of A Apo Scor E		1e-17
3uwr_A	286	Crystal Structure Of Carveol Dehydrogenase From Myc		1e-17
2gdz_A	267	Crystal Structure Of 15-Hydroxyprostaglandin Dehydr		2e-17
1cyd_A	244	Carbonyl Reductase Complexed With Nadph And 2-Propa		2e-17
3uve_A	286	Crystal Structure Of Carveol Dehydrogenase ((+)-Tra		3e-17
4da9_A	280	Crystal Structure Of Putative Short-Chain Dehydroge		4e-17
3uxy_A	266	The Crystal Structure Of Short Chain Dehydrogenase		6e-17
2y93_A	281	Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2		9e-17
3ucx_A	264	The Structure Of A Short Chain Dehydrogenase From M		1e-16
3ppi_A	281	Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenas		2e-16
2ag5_A	246	Crystal Structure Of Human Dhrs6 Length = 246		2e-16
3tpc_A	257	Crystal Structure Of A Hypothtical Protein Sma1452		2e-16
4fgs_A	273	Crystal Structure Of A Probable Dehydrogenase Prote		4e-16
1pr9_A	244	Human L-Xylulose Reductase Holoenzyme Length = 244		5e-16
3d3w_A	244	Structure Of L-Xylulose Reductase With Bound Coenzy		6e-16
3tjr_A	301	Crystal Structure Of A Rv0851c Ortholog Short Chain		2e-15
2qq5_A	260	Crystal Structure Of Human Sdr Family Member 1 Leng		2e-15
1uay_A	242	Crystal Structure Of Type Ii 3-Hydroxyacyl-Coa Dehy		3e-15
4dyv_A	272	Crystal Structure Of A Short-Chain DehydrogenaseRED		4e-15
1w0c_A	307	Inhibition Of Leishmania Major Pteridine Reductase		4e-15
4eso_A	255	Crystal Structure Of A Putative Oxidoreductase Prot		4e-15
3vc7_A	254	Crystal Structure Of A Putative Oxidoreductase From		4e-15
1e92_A	288	Pteridine Reductase 1 From Leishmania Major Complex		5e-15
1e7w_A	291	One Active Site, Two Modes Of Reduction Correlate T		5e-15
2qhx_A	328	Structure Of Pteridine Reductase From Leishmania Ma		5e-15
3f5q_A	262	Crystal Structure Of Putative Short Chain Dehydroge		6e-15
3f5s_A	255	Crystal Structure Of Putatitve Short Chain Dehydrog		6e-15
3d3w_B	245	Structure Of L-Xylulose Reductase With Bound Coenzy		8e-15
2jap_A	247	Clavulanic Acid Dehydrogenase: Structural And Bioch		2e-14
3lf1_A	265	Apo Structure Of The Short Chain Oxidoreductase Q9h		2e-14
4egf_A	266	Crystal Structure Of A L-Xylulose Reductase From My		2e-14
3f1l_A	252	The 0.95 A Structure Of An Oxidoreductase, Ycik Fro		2e-14
2xox_A	288	Crystal Structure Of Pteridine Reductase (Ptr1) Fro		3e-14
3tsc_A	277	Crystal Structure Of Short Chain Dehydrogenase Map_		4e-14
1yb1_A	272	Crystal Structure Of Human 17-Beta-Hydroxysteroid D		6e-14
1bdb_A	277	Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From		7e-14
2bgk_A	278	X-Ray Structure Of Apo-Secoisolariciresinol Dehydro		9e-14
3svt_A	281	Structure Of A Short-Chain Type DehydrogenaseREDUCT		1e-13
1hxh_A	253	Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID D		1e-13
2jah_A	247	Biochemical And Structural Analysis Of The Clavulan		2e-13
3g1t_A	258	Crystal Structure Of Short Chain Dehydrogenase From		7e-13
3p19_A	266	Improved Nadph-Dependent Blue Fluorescent Protein L		2e-12
3nyw_A	250	Crystal Structure Of A Betaketoacyl-[acp] Reductase		2e-12
3kvo_A	346	Crystal Structure Of The Catalytic Domain Of Human		3e-12
3rku_A	287	Substrate Fingerprint And The Structure Of Nadp+ De		3e-12
1w6u_A	302	Structure Of Human Decr Ternary Complex Length = 30		6e-12
4gkb_A	258	Crystal Structure Of A Short Chain Dehydrogenase Ho		2e-11
3e03_A	274	Crystal Structure Of A Putative Dehydrogenase From		2e-11
3e9q_A	273	Crystal Structure Of The Short Chain Dehydrogenase		2e-11
3ksu_A	262	Crystal Structure Of Short-Chain Dehydrogenase From		2e-11
3pxx_A	287	Crystal Structure Of Carveol Dehydrogenase From Myc		3e-11
1w73_A	302	Binary Structure Of Human Decr Solved By Semet Sad.		3e-11
3f1k_A	252	Crystal Structure Of Ycik From E. Coli, An Oxidored		5e-11
3asu_A	248	Crystal Structure Of Serine Dehydrogenase From Esch		6e-11
4e4y_A	244	The Crystal Structure Of A Short Chain Dehydrogenas		7e-11
1zmo_A	244	Apo Structure Of Haloalcohol Dehalogenase Hhea Of A		9e-11
4dry_A	281	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		9e-11
3tn7_A	257	Crystal Structure Of Short-Chain Alcohol Dehydrogen		1e-10
3m1a_A	281	The Crystal Structure Of A Short-Chain Dehydrogenas		2e-10
3l77_A	235	X-Ray Structure Alcohol Dehydrogenase From Archaeon		2e-10
4h15_A	261	Crystal Structure Of A Short Chain Alcohol Dehydrog		6e-10
2yw9_A	261	Crystal Structure Of Tt0143 From Thermus Thermophil		1e-09
1ulu_A	261	Crystal Structure Of Tt0143 From Thermus Thermophil		4e-09
2dkn_A	255	Crystal Structure Of The 3-alpha-hydroxysteroid Deh		4e-09
3d5q_A	272	Crystal Structure Of 11b-Hsd1 In Complex With Triaz		5e-09
2ilt_A	275	Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W		5e-09
4bb5_A	292	Free-Wilson And Structural Approaches To Co-Optimis		5e-09
1xu7_A	286	Crystal Structure Of The Interface Open Conformatio		5e-09
3pdj_A	273	Crystal Structure Of Human 11-Beta-Hydroxysteroid D		5e-09
2rbe_A	275	The Discovery Of 2-Anilinothiazolones As 11beta-Hsd		6e-09
3iah_A	256	Crystal Structure Of Short Chain Dehydrogenase (yci		6e-09
2bel_A	283	Structure Of Human 11-Beta-Hydroxysteroid Dehydroge		6e-09
2irw_A	264	Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W		6e-09
4bb6_A	292	Free-Wilson And Structural Approaches To Co-Optimis		7e-09
3ch6_A	286	Crystal Structure Of 11beta-Hsd1 Double Mutant (L26		9e-09
4hfr_A	272	Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In		1e-08
3ioy_A	319	Structure Of Putative Short-Chain Dehydrogenase (Sa		2e-08
1xse_A	295	Crystal Structure Of Guinea Pig 11beta-Hydroxystero		3e-08
3lz6_A	263	Guinea Pig 11beta Hydroxysteroid Dehydrogenase With		3e-08
3g49_A	277	N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b-		4e-08
3dwf_A	276	Crystal Structure Of The Guinea Pig 11beta-Hydroxys		5e-08
2nwq_A	272	Short Chain Dehydrogenase From Pseudomonas Aerugino		9e-08
3kzv_A	254	The Crystal Structure Of A Cytoplasmic Protein With		2e-07
3oif_A	266	Crystal Structure Of Enoyl-Acp Reductases I (Fabi)		2e-07
4ixt_A	254	Structure Of A 37-fold Mutant Of Halohydrin Dehalog		3e-07
1pwx_A	254	Crystal Structure Of The Haloalcohol Dehalogenase H		4e-07
3gmd_A	264	Structure-Based Design Of 7-Azaindole-Pyrrolidines		4e-07
1y5m_A	276	The Crystal Structure Of Murine 11b-Hydroxysteroid		1e-06
3e9n_A	245	Crystal Structure Of A Putative Short-Chain Dehydro		1e-06
3h7a_A	252	Crystal Structure Of Short-Chain Dehydrogenase From		1e-06
1fjh_A	257	The Crystal Structure Of 3-Alpha-Hydroxysteroid Deh		5e-06
2qio_A	256	X-Ray Structure Of Enoyl-Acyl Carrier Protein Reduc		8e-06
3ojf_A	257	Crystal Structure Of The Bacillus Cereus Enoyl-Acyl		9e-06
3rj5_A	254	Structure Of Alcohol Dehydrogenase From Drosophila		2e-05
1a4u_A	254	Alcohol Dehydrogenase From Drosophila Lebanonensis		2e-05
1nas_A	259	Sepiapterin Reductase Complexed With N-acetyl Serot		2e-05
1sep_A	261	Mouse Sepiapterin Reductase Complexed With Nadp And		2e-05
1mg5_A	255	Crystal Structure Of Drosophila Melanogaster Alcoho		2e-05
3sc4_A	285	Crystal Structure Of A Short Chain Dehydrogenase (A		3e-05
1equ_A	327	Type 1 17-Beta Hydroxysteroid Dehydrogenase Equilin		5e-05
1fdu_A	327	Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 M		6e-05
1fds_A	327	Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 C		6e-05
1fdw_A	327	Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 M		6e-05
1a27_A	289	Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 C		7e-05
2p91_A	285	Crystal Structure Of Enoyl-[acyl-Carrier-Protein] R		7e-05
3uce_A	223	Crystal Structure Of A Small-Chain Dehydrogenase In		9e-05
3gem_A	260	Crystal Structure Of Short-Chain Dehydrogenase From		2e-04
1z6z_A	282	Crystal Structure Of Human Sepiapterin Reductase In		2e-04
1iol_A	327	Estrogenic 17-beta Hydroxysteroid Dehydrogenase Com		2e-04
1n5d_A	288	Crystal Structure Of Porcine Testicular Carbonyl Re		3e-04
2hrb_A	274	Crystal Structure Of Human Carbonyl Reductase 3, Co		3e-04
1wma_A	276	Crystal Structure Of Human Cbr1 In Complex With Hyd		3e-04

>pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein Reductase From Brassica Napus Complexed With Nadp+ Length = 244

Iteration: 1
 Score =  393 bits (1009), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 190/244 (77%), Positives = 214/244 (87%)
Query: 26  APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDV 85
           +PV VVTGASRGIG+A+A SLGKAGCKVLVNYARS+K AEEV K+IEA GGQA+TFGGDV
Sbjct: 1   SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDV 60
Query: 86  SKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQX 145
           SKEADVE+M+KTA+DAWGT+D+++NNAGITRDTLL+RMKKSQW +VIDLNLTGVFLCTQ 
Sbjct: 61  SKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQA 120
Query: 146 XXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIA 205
                     GRIINIASVVGL+GNIGQANY+AAKAGVIG +KT A+E ASRNINVN + 
Sbjct: 121 ATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVC 180
Query: 206 PGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDG 265
           PGFIASDMTAKLGED+EKKIL  IPLGR GQPE VAGLVEFLAL+PAA YITGQ  TIDG
Sbjct: 181 PGFIASDMTAKLGEDMEKKILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQAFTIDG 240
Query: 266 GMVM 269
           G+ +
Sbjct: 241 GIAI 244

>pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Synechococcus Elongatus Pcc 7942 Length = 269

Iteration: 1
 Score =  284 bits (726), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 152/242 (62%), Positives = 186/242 (76%), Gaps = 3/242 (1%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           +A+VTGASRGIGRA+A  L  AG KV VNYA S+  A+EV   I A+GG+A     DVS+
Sbjct: 30  IALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQ 89
Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXX 147
           E++VE++    ++ WG +D+L+NNAGITRDTLL+RMK+  WQ V+DLNL GVFLC++   
Sbjct: 90  ESEVEALFAAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAA 149
Query: 148 XXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
                   GRIINIASVVG +GN GQANYSAAKAGVIGLTKTVAKE ASR I VNA+APG
Sbjct: 150 KIMLKQRSGRIINIASVVGEMGNPGQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPG 209
Query: 208 FIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM 267
           FIA+DMT++L  +   K+LE IPLGRYG+  EVAG+V FLA +PAA YITGQV+ IDGG+
Sbjct: 210 FIATDMTSELAAE---KLLEVIPLGRYGEAAEVAGVVRFLAADPAAAYITGQVINIDGGL 266
Query: 268 VM 269
           VM
Sbjct: 267 VM 268

>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246

Iteration: 1
 Score =  271 bits (692), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 137/246 (55%), Positives = 176/246 (71%), Gaps = 1/246 (0%)
Query: 24  VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGG 83
           ++  VA+VTGASRGIGRA+A  L K G  V+VNYA + ++A EV  EI+  G  A+    
Sbjct: 2   LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRA 61
Query: 84  DVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCT 143
           DV+   DV +M+K  VD +G VDIL+NNAG+T+D LLMRMK+ +W  VI+ NL GVFLCT
Sbjct: 62  DVANAEDVTNMVKQTVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCT 121
Query: 144 QXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNA 203
           +           GRI+NIASVVG+ GN GQANY AAKAGVIGLTKT AKE ASRNI VNA
Sbjct: 122 KAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGVIGLTKTSAKELASRNITVNA 181
Query: 204 IAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTI 263
           IAPGFIA+DMT  L E+++ ++L+ IP  ++G+ +++A  V F A + +  YITGQ L +
Sbjct: 182 IAPGFIATDMTDVLDENIKAEMLKLIPAAQFGEAQDIANAVTFFASDQSK-YITGQTLNV 240
Query: 264 DGGMVM 269
           DGGMVM
Sbjct: 241 DGGMVM 246

>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252

Iteration: 1
 Score =  256 bits (653), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 130/241 (53%), Positives = 170/241 (70%), Gaps = 1/241 (0%)
Query: 29  AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKE 88
           A+VTGASRGIGR++A  L + G  V VNYA S ++AE V +EI+A G  +     +V+  
Sbjct: 13  ALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADA 72
Query: 89  ADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXXX 148
            +V++MIK  V  +G++D+L+NNAGITRD LLMRMK+ +W DVID NL GVF C Q    
Sbjct: 73  DEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATP 132
Query: 149 XXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGF 208
                  G IIN++SVVG VGN GQANY A KAGVIGLTK+ A+E ASR I VNA+APGF
Sbjct: 133 QMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGF 192
Query: 209 IASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMV 268
           I SDMT  L ++L++++L +IPL R+GQ  ++A  V FLA + A  YITGQ + ++GGM 
Sbjct: 193 IVSDMTDALSDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAK-YITGQTIHVNGGMY 251
Query: 269 M 269
           M
Sbjct: 252 M 252

>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285

Iteration: 1
 Score =  246 bits (629), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 125/243 (51%), Positives = 165/243 (67%), Gaps = 2/243 (0%)
Query: 25  EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGD 84
           E  VA+VTGA RGIGR +A  L K+   V+   +R+ K  + V  EI++ G ++  + GD
Sbjct: 43  ENKVALVTGAGRGIGREIAKMLAKSVSHVIC-ISRTQKSCDSVVDEIKSFGYESSGYAGD 101
Query: 85  VSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQ 144
           VSK+ ++  +I   +     VDIL+NNAGITRD L +RMK  +W+DV+  NL  +F  TQ
Sbjct: 102 VSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQ 161
Query: 145 XXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAI 204
                      GRIINI+S+VGL GN+GQANYS++KAGVIG TK++AKE ASRNI VNAI
Sbjct: 162 PISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNITVNAI 221
Query: 205 APGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTID 264
           APGFI+SDMT K+ E ++K I+  IP GR G PEEVA L  FL+ +  +GYI G+V  ID
Sbjct: 222 APGFISSDMTDKISEQIKKNIISNIPAGRMGTPEEVANLACFLS-SDKSGYINGRVFVID 280
Query: 265 GGM 267
           GG+
Sbjct: 281 GGL 283

>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247

Iteration: 1
 Score =  244 bits (623), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 117/246 (47%), Positives = 172/246 (69%), Gaps = 1/246 (0%)
Query: 24  VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGG 83
           ++   A+VTG+SRG+G+A+A  LG  G  +++N + +S   +   +E +A+G   +   G
Sbjct: 3   LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKG 62
Query: 84  DVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCT 143
           DV    DVE+M+KTA+DA+G +DIL+NNAGITRDTL+++M +  W DV++ NL   +LCT
Sbjct: 63  DVKNPEDVENMVKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCT 122
Query: 144 QXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNA 203
           +           G+IINI S+ G++GN GQANY+A+KAG+IG TK++AKE+A++ I  NA
Sbjct: 123 KAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKAGLIGFTKSIAKEFAAKGIYCNA 182
Query: 204 IAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTI 263
           +APG I +DMT  L + +++  L  IPL R+G PEEVA +V FLA +  + YITGQV+ I
Sbjct: 183 VAPGIIKTDMTDVLPDKVKEMYLNNIPLKRFGTPEEVANVVGFLASDD-SNYITGQVINI 241
Query: 264 DGGMVM 269
           DGG+VM
Sbjct: 242 DGGLVM 247

>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246

Iteration: 1
 Score =  239 bits (610), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 125/238 (52%), Positives = 164/238 (68%), Gaps = 1/238 (0%)
Query: 29  AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKE 88
           A+VTGASRGIGR++A  L + G  V VNYA S ++AE V +EI+A G  +     +V+  
Sbjct: 7   ALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADA 66
Query: 89  ADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXXX 148
            +V++ IK  V  +G++D+L+NNAGITRD LL R K+ +W DVID NL GVF C Q    
Sbjct: 67  DEVKAXIKEVVSQFGSLDVLVNNAGITRDNLLXRXKEQEWDDVIDTNLKGVFNCIQKATP 126
Query: 149 XXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGF 208
                  G IIN++SVVG VGN GQANY A KAGVIGLTK+ A+E ASR I VNA+APGF
Sbjct: 127 QXLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGF 186
Query: 209 IASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGG 266
           I SD T  L ++L+++ L +IPL R+GQ  ++A  V FLA + A  YITGQ + ++GG
Sbjct: 187 IVSDXTDALSDELKEQXLTQIPLARFGQDTDIANTVAFLASDKAK-YITGQTIHVNGG 243

>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251

Iteration: 1
 Score =  228 bits (580), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 120/248 (48%), Positives = 164/248 (66%), Gaps = 7/248 (2%)
Query: 23  NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASG-GQALTF 81
           N+E  VA+VTGASRGIG+A+A  L + G KV +  A S   A+ +   +  +G G AL  
Sbjct: 9   NLEGKVALVTGASRGIGKAIAELLAERGAKV-IGTATSESGAQAISDYLGDNGKGMAL-- 65
Query: 82  GGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFL 141
             +V+    +E+++K   D +G VDIL+NNAGITRD LLMRMK+ +W D+++ NLT +F 
Sbjct: 66  --NVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFR 123
Query: 142 CTQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINV 201
            ++           GRIIN+ SVVG +GN GQANY+AAKAGVIG TK++A+E ASR + V
Sbjct: 124 LSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTV 183
Query: 202 NAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL 261
           N +APGFI +DMT  L ++     L ++P GR G P E+A  V FLA +P A YITG+ L
Sbjct: 184 NTVAPGFIETDMTKALNDEQRTATLAQVPAGRLGDPREIASAVAFLA-SPEAAYITGETL 242
Query: 262 TIDGGMVM 269
            ++GGM M
Sbjct: 243 HVNGGMYM 250

>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251

Iteration: 1
 Score =  226 bits (576), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 119/248 (47%), Positives = 164/248 (66%), Gaps = 7/248 (2%)
Query: 23  NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASG-GQALTF 81
           N+E  VA+VTGASRGIG+A+A  L + G KV +  A S   A+ +   +  +G G AL  
Sbjct: 9   NLEGKVALVTGASRGIGKAIAELLAERGAKV-IGTATSESGAQAISDYLGDNGKGMAL-- 65
Query: 82  GGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFL 141
             +V+    +E+++K   D +G VDIL+NNAGITRD LLMRMK+ +W D+++ NLT +F 
Sbjct: 66  --NVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFR 123
Query: 142 CTQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINV 201
            ++           GRIIN+ SVVG +GN GQAN++AAKAGVIG TK++A+E ASR + V
Sbjct: 124 LSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANFAAAKAGVIGFTKSMAREVASRGVTV 183
Query: 202 NAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL 261
           N +APGFI +DMT  L ++     L ++P GR G P E+A  V FLA +P A YITG+ L
Sbjct: 184 NTVAPGFIETDMTKALNDEQRTATLAQVPAGRLGDPREIASAVAFLA-SPEAAYITGETL 242
Query: 262 TIDGGMVM 269
            ++GGM M
Sbjct: 243 HVNGGMYM 250

>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score =  225 bits (573), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 119/248 (47%), Positives = 163/248 (65%), Gaps = 7/248 (2%)
Query: 23  NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASG-GQALTF 81
           N+E  VA+VTGASRGIG+A+A  L + G KV +  A S   A+ +   +  +G G AL  
Sbjct: 9   NLEGKVALVTGASRGIGKAIAELLAERGAKV-IGTATSESGAQAISDYLGDNGKGMAL-- 65
Query: 82  GGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFL 141
             +V+    +E+++K   D +G VDIL+NNA ITRD LLMRMK+ +W D+++ NLT +F 
Sbjct: 66  --NVTNPESIEAVLKAITDEFGGVDILVNNAAITRDNLLMRMKEEEWSDIMETNLTSIFR 123
Query: 142 CTQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINV 201
            ++           GRIIN+ SVVG +GN GQANY+AAKAGVIG TK++A+E ASR + V
Sbjct: 124 LSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTV 183
Query: 202 NAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL 261
           N +APGFI +DMT  L ++     L ++P GR G P E+A  V FLA +P A YITG+ L
Sbjct: 184 NTVAPGFIETDMTKALNDEQRTATLAQVPAGRLGDPREIASAVAFLA-SPEAAYITGETL 242
Query: 262 TIDGGMVM 269
            ++GGM M
Sbjct: 243 HVNGGMYM 250

>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251

Iteration: 1
 Score =  224 bits (572), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 119/248 (47%), Positives = 163/248 (65%), Gaps = 7/248 (2%)
Query: 23  NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASG-GQALTF 81
           N+E  VA+VTGASRGIG+A+A  L + G KV +  A S   A+ +   +  +G G AL  
Sbjct: 9   NLEGKVALVTGASRGIGKAIAELLAERGAKV-IGTATSESGAQAISDYLGDNGKGMAL-- 65
Query: 82  GGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFL 141
             +V+    +E+++K   D +G VDIL+NNA ITRD LLMRMK+ +W D+++ NLT +F 
Sbjct: 66  --NVTNPESIEAVLKAITDEFGGVDILVNNADITRDNLLMRMKEEEWSDIMETNLTSIFR 123
Query: 142 CTQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINV 201
            ++           GRIIN+ SVVG +GN GQANY+AAKAGVIG TK++A+E ASR + V
Sbjct: 124 LSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTV 183
Query: 202 NAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL 261
           N +APGFI +DMT  L ++     L ++P GR G P E+A  V FLA +P A YITG+ L
Sbjct: 184 NTVAPGFIETDMTKALNDEQRTATLAQVPAGRLGDPREIASAVAFLA-SPEAAYITGETL 242
Query: 262 TIDGGMVM 269
            ++GGM M
Sbjct: 243 HVNGGMYM 250

>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score =  223 bits (569), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 119/248 (47%), Positives = 163/248 (65%), Gaps = 7/248 (2%)
Query: 23  NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASG-GQALTF 81
           N+E  VA+VTGASRGIG+A+A  L + G KV +  A S   A+ +   +  +G G AL  
Sbjct: 9   NLEGKVALVTGASRGIGKAIAELLAERGAKV-IGTATSESGAQAISDYLGDNGKGMAL-- 65
Query: 82  GGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFL 141
             +V+    +E+++K   D +G VDIL+NNAGITRD LLMRMK+ +W D+++ NLT +F 
Sbjct: 66  --NVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFR 123
Query: 142 CTQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINV 201
            ++           GRIIN+ SVVG +GN GQANY+AAKAGVIG TK++A+E ASR + V
Sbjct: 124 LSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTV 183
Query: 202 NAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL 261
           N +APG I +DMT  L ++     L ++P GR G P E+A  V FLA +P A YITG+ L
Sbjct: 184 NTVAPGAIETDMTKALNDEQRTATLAQVPAGRLGDPREIASAVAFLA-SPEAAYITGETL 242
Query: 262 TIDGGMVM 269
            ++GGM M
Sbjct: 243 HVNGGMYM 250

>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244

Iteration: 1
 Score =  219 bits (558), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 120/247 (48%), Positives = 162/247 (65%), Gaps = 5/247 (2%)
Query: 23  NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFG 82
           N E  +A+VTGASRGIGRA+A +L   G KV +  A S   A+ +   + A+G + L   
Sbjct: 2   NFEGKIALVTGASRGIGRAIAETLAARGAKV-IGTATSENGAQAISDYLGANG-KGLML- 58
Query: 83  GDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLC 142
            +V+  A +ES+++     +G VDIL+NNAGITRD LLMRMK  +W D+I+ NL+ VF  
Sbjct: 59  -NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRL 117
Query: 143 TQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
           ++           GRII I SVVG +GN GQANY+AAKAG+IG +K++A+E ASR I VN
Sbjct: 118 SKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVN 177
Query: 203 AIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLT 262
            +APGFI +DMT  L +D    IL ++P GR G  +E+A  V FLA + AA YITG+ L 
Sbjct: 178 VVAPGFIETDMTRALSDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAA-YITGETLH 236
Query: 263 IDGGMVM 269
           ++GGM M
Sbjct: 237 VNGGMYM 243

>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248

Iteration: 1
 Score =  219 bits (557), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 115/245 (46%), Positives = 161/245 (65%), Gaps = 3/245 (1%)
Query: 24  VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEI-EASGGQALTFG 82
           ++  V++VTG++RGIGRA+A  L  AG  V++    S + A+ V +EI    G +A    
Sbjct: 5   LQGKVSLVTGSTRGIGRAIAEKLASAGSTVIIT-GTSGERAKAVAEEIANKYGVKAHGVE 63
Query: 83  GDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLC 142
            ++  E  +    +   +    +DIL+NNAGITRD L +RM    W++V+ +NLTG FL 
Sbjct: 64  MNLLSEESINKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLV 123
Query: 143 TQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
           TQ           GRI+NI+SVVG  GN+GQ NYS  KAG+IG TK++AKE A RN+ VN
Sbjct: 124 TQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSLAKELAPRNVLVN 183
Query: 203 AIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLT 262
           A+APGFI +DMTA L E++++K  E+IPLGR+G PEEVA +V FL  +  A YITG+V+ 
Sbjct: 184 AVAPGFIETDMTAVLSEEIKQKYKEQIPLGRFGSPEEVANVVLFLC-SELASYITGEVIH 242
Query: 263 IDGGM 267
           ++GGM
Sbjct: 243 VNGGM 247

>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244

Iteration: 1
 Score =  218 bits (555), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 119/247 (48%), Positives = 162/247 (65%), Gaps = 5/247 (2%)
Query: 23  NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFG 82
           N E  +A+VTGASRGIGRA+A +L   G KV +  A S   A+ +   + A+G + L   
Sbjct: 2   NFEGKIALVTGASRGIGRAIAETLAARGAKV-IGTATSENGAQAISDYLGANG-KGLML- 58
Query: 83  GDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLC 142
            +V+  A +ES+++     +G VDIL+NNAGITRD LLMRMK  +W D+I+ NL+ VF  
Sbjct: 59  -NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRL 117
Query: 143 TQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
           ++           GRII I SVVG +GN GQAN++AAKAG+IG +K++A+E ASR I VN
Sbjct: 118 SKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANFAAAKAGLIGFSKSLAREVASRGITVN 177
Query: 203 AIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLT 262
            +APGFI +DMT  L +D    IL ++P GR G  +E+A  V FLA + AA YITG+ L 
Sbjct: 178 VVAPGFIETDMTRALSDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAA-YITGETLH 236
Query: 263 IDGGMVM 269
           ++GGM M
Sbjct: 237 VNGGMYM 243

>pdb|2PH3|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein] Reductase Ttha0415 From Thermus Thermophilus Length = 245

Iteration: 1
 Score =  215 bits (547), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 114/240 (47%), Positives = 165/240 (68%), Gaps = 2/240 (0%)
Query: 29  AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQAL-TFGGDVSK 87
           A++TGASRGIGRA+A  L + G  + ++Y ++ ++AEEV +E    G   +   G ++ +
Sbjct: 4   ALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLE 63
Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXX 147
                +++  A +  G +D L+NNAGITRDTLL+RMK   W+ V++ NL+ VF  T+   
Sbjct: 64  AEAATALVHQAAEVLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAV 123
Query: 148 XXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
                   GRI+NI SVVG++GN GQANY A+KAG+IG T+ VAKEYA R I VNA+APG
Sbjct: 124 KLMMKARFGRIVNITSVVGILGNPGQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPG 183
Query: 208 FIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM 267
           FI ++MT +L +++++  L++IP GR+G+PEEVA  V FL ++  AGYITGQ L +DGG+
Sbjct: 184 FIETEMTERLPQEVKEAYLKQIPAGRFGRPEEVAEAVAFL-VSEKAGYITGQTLCVDGGL 242

>pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248

Iteration: 1
 Score =  211 bits (538), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 117/245 (47%), Positives = 158/245 (64%), Gaps = 7/245 (2%)
Query: 23  NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASG-GQALTF 81
           N+E  VA+VTGASRGIG+A+A  L + G KV +  A S   A+ +   +  +G G AL  
Sbjct: 6   NLEGKVALVTGASRGIGKAIAELLAERGAKV-IGTATSESGAQAISDYLGDNGKGXAL-- 62
Query: 82  GGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFL 141
             +V+    +E+++K   D +G VDIL+NNAGITRD LL R K+ +W D+ + NLT +F 
Sbjct: 63  --NVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLXRXKEEEWSDIXETNLTSIFR 120
Query: 142 CTQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINV 201
            ++           GRIIN+ SVVG  GN GQANY+AAKAGVIG TK+ A+E ASR + V
Sbjct: 121 LSKAVLRGXXKKRQGRIINVGSVVGTXGNAGQANYAAAKAGVIGFTKSXAREVASRGVTV 180
Query: 202 NAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL 261
           N +APGFI +D T  L ++     L ++P GR G P E+A  V FLA +P A YITG+ L
Sbjct: 181 NTVAPGFIETDXTKALNDEQRTATLAQVPAGRLGDPREIASAVAFLA-SPEAAYITGETL 239
Query: 262 TIDGG 266
            ++GG
Sbjct: 240 HVNGG 244

>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270

Iteration: 1
 Score =  204 bits (519), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 109/248 (43%), Positives = 157/248 (63%), Gaps = 2/248 (0%)
Query: 22  QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTF 81
           + ++  VA+VTGASRGIGRA+A  L + G  V +  A +   AE +    + +G +    
Sbjct: 24  KTLDKQVAIVTGASRGIGRAIALELARRGAMV-IGTATTEAGAEGIGAAFKQAGLEGRGA 82
Query: 82  GGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFL 141
             +V+    V++++++ +  +G +++L+NNAGIT+D L MRMK  +W  VID NL  VF 
Sbjct: 83  VLNVNDATAVDALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFR 142
Query: 142 CTQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINV 201
            ++           GRI+NI SVVG  GN GQ NY+AAKAGV G+T+ +A+E  SR I V
Sbjct: 143 LSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKAGVAGMTRALAREIGSRGITV 202
Query: 202 NAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL 261
           N +APGFI +DMT  L ++ +  +  +IPLGR G PE++A  V FLA +P AGYITG  L
Sbjct: 203 NCVAPGFIDTDMTKGLPQEQQTALKTQIPLGRLGSPEDIAHAVAFLA-SPQAGYITGTTL 261
Query: 262 TIDGGMVM 269
            ++GGM M
Sbjct: 262 HVNGGMFM 269

>pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein) Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a Resolution Length = 269

Iteration: 1
 Score =  203 bits (517), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 112/249 (44%), Positives = 163/249 (65%), Gaps = 2/249 (0%)
Query: 21  AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALT 80
           + +++  VA+VTGASRGIG+A+A  LG+ G  V++  A S+  AE++ + ++A+G +   
Sbjct: 22  SMSLQGKVALVTGASRGIGQAIALELGRLGA-VVIGTATSASGAEKIAETLKANGVEGAG 80
Query: 81  FGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVF 140
              DVS +  V + ++      G   I++NNAGITRD LL+RMK  +W DV++ NL  ++
Sbjct: 81  LVLDVSSDESVAATLEHIQQHLGQPLIVVNNAGITRDNLLVRMKDDEWFDVVNTNLNSLY 140
Query: 141 LCTQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNIN 200
             ++           GRIINI SVVG +GN GQ NY+AAKAG+ G T+ +A+E  SR I 
Sbjct: 141 RLSKAVLRGMTKARWGRIINIGSVVGAMGNAGQTNYAAAKAGLEGFTRALAREVGSRAIT 200
Query: 201 VNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQV 260
           VNA+APGFI +DMT +L E   + +L +IPLGR GQ EE+A +V FLA + AA Y+TG  
Sbjct: 201 VNAVAPGFIDTDMTRELPEAQREALLGQIPLGRLGQAEEIAKVVGFLASDGAA-YVTGAT 259
Query: 261 LTIDGGMVM 269
           + ++GGM M
Sbjct: 260 VPVNGGMYM 268

>pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase Rickettsia Prowazekii Length = 249

Iteration: 1
 Score =  195 bits (495), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 115/243 (47%), Positives = 152/243 (62%), Gaps = 13/243 (5%)
Query: 29  AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQAL--TFGGDVS 86
           +++TGAS GIG A+A  L K G KV++     S   EE  K +    G AL   +  +V 
Sbjct: 17  SLITGASSGIGSAIARLLHKLGSKVII-----SGSNEEKLKSL----GNALKDNYTIEVC 67
Query: 87  KEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXX 146
             A+ E      +     +DIL+ NAGIT DTL +RMK   +  VID+NL   F+  +  
Sbjct: 68  NLANKEE-CSNLISKTSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREA 126
Query: 147 XXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
                    GRIINI+S+VG+ GN GQANY A+KAG+IG+TK+++ E A+R I VNA+AP
Sbjct: 127 IKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAP 186
Query: 207 GFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGG 266
           GFI SDMT KL E   + I++KIPLG YG PE+VA  V FLA N A+ YITGQ L ++GG
Sbjct: 187 GFIKSDMTDKLNEKQREAIVQKIPLGTYGIPEDVAYAVAFLASNNAS-YITGQTLHVNGG 245
Query: 267 MVM 269
           M+M
Sbjct: 246 MLM 248

>pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE From Brucella Melitensis Length = 246

Iteration: 1
 Score =  190 bits (482), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 110/242 (45%), Positives = 150/242 (61%), Gaps = 7/242 (2%)
Query: 29  AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS-GGQALTFGGDVSK 87
           A+VTGA+ G+G A+A +L   G  V ++  R     EE  KE+ A  G +   F  ++S 
Sbjct: 10  ALVTGATGGLGEAIARALHAQGAIVGLHGTR-----EEKLKELAAELGERIFVFPANLSD 64
Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXX 147
              V+++ + A +  G VDIL+NNAGITRD L +RM    W  V+ +NLT VF  T+   
Sbjct: 65  REAVKALGQKAEEEMGGVDILVNNAGITRDGLFVRMSDEDWDAVLTVNLTSVFNLTRELT 124
Query: 148 XXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
                   GRIINI S+VG+ GN GQANY A+KAG+IG +K++A+E ASRN+ VN IAPG
Sbjct: 125 HPMMRRRNGRIINITSIVGVTGNPGQANYCASKAGLIGFSKSLAQEIASRNVTVNCIAPG 184
Query: 208 FIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM 267
           FI S MT KL E  +  I+  IP+ R G   ++A  V +LA + AA Y+TGQ L ++GGM
Sbjct: 185 FIESAMTGKLNEKQKDAIMGNIPMKRMGVGADIAAAVVYLASDEAA-YVTGQTLHVNGGM 243
Query: 268 VM 269
            M
Sbjct: 244 AM 245

>pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE FROM BRUCELLA Melitensis (P43212) Length = 249

Iteration: 1
 Score =  190 bits (482), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 110/242 (45%), Positives = 150/242 (61%), Gaps = 7/242 (2%)
Query: 29  AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS-GGQALTFGGDVSK 87
           A+VTGA+ G+G A+A +L   G  V ++  R     EE  KE+ A  G +   F  ++S 
Sbjct: 13  ALVTGATGGLGEAIARALHAQGAIVGLHGTR-----EEKLKELAAELGERIFVFPANLSD 67
Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXX 147
              V+++ + A +  G VDIL+NNAGITRD L +RM    W  V+ +NLT VF  T+   
Sbjct: 68  REAVKALGQKAEEEMGGVDILVNNAGITRDGLFVRMSDEDWDAVLTVNLTSVFNLTRELT 127
Query: 148 XXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
                   GRIINI S+VG+ GN GQANY A+KAG+IG +K++A+E ASRN+ VN IAPG
Sbjct: 128 HPMMRRRNGRIINITSIVGVTGNPGQANYCASKAGLIGFSKSLAQEIASRNVTVNCIAPG 187
Query: 208 FIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM 267
           FI S MT KL E  +  I+  IP+ R G   ++A  V +LA + AA Y+TGQ L ++GGM
Sbjct: 188 FIESAMTGKLNEKQKDAIMGNIPMKRMGVGADIAAAVVYLASDEAA-YVTGQTLHVNGGM 246
Query: 268 VM 269
            M
Sbjct: 247 AM 248

>pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier Protein Reductase From Streptomyces Coelicolor A3(2) Length = 253

Iteration: 1
 Score =  189 bits (479), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 100/240 (41%), Positives = 146/240 (60%), Gaps = 13/240 (5%)
Query: 30  VVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEA 89
           +VTG +RGIG A+A +   AG KV + Y RS +  E             L    D++   
Sbjct: 25  LVTGGNRGIGLAIARAFADAGDKVAITY-RSGEPPEGF-----------LAVKCDITDTE 72
Query: 90  DVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXXXX 149
            VE   K   +  G V++LI NAG+T+D LLMRM +  +  V++ NLTG F   +     
Sbjct: 73  QVEQAYKEIEETHGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRA 132
Query: 150 XXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFI 209
                 GR++ I+SVVGL+G+ GQANY+A+KAG++G  +++A+E  SRNI  N +APGF+
Sbjct: 133 MLRAKKGRVVLISSVVGLLGSAGQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFV 192
Query: 210 ASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 269
            +DMT  L ++    I+ ++PLGRY +PEE+A  V FLA + A+ YITG V+ +DGG+ M
Sbjct: 193 DTDMTKVLTDEQRANIVSQVPLGRYARPEEIAATVRFLASDDAS-YITGAVIPVDGGLGM 251

>pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Bartonella Henselae Length = 266

Iteration: 1
 Score =  187 bits (476), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 110/242 (45%), Positives = 143/242 (59%), Gaps = 7/242 (2%)
Query: 29  AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS-GGQALTFGGDVSK 87
           A+VTGA+ GIG A+A      G  V ++  R  K      KEI A  G     F  ++S 
Sbjct: 30  ALVTGATGGIGEAIARCFHAQGAIVGLHGTREDK-----LKEIAADLGKDVFVFSANLSD 84
Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXX 147
              ++ + + A      +DIL+NNAGITRD L +RM+   W DV+ +NLT     T+   
Sbjct: 85  RKSIKQLAEVAEREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELI 144
Query: 148 XXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
                   GRIINI S+VG+VGN GQ NY AAKAG+IG +K +A+E ASRNI VN IAPG
Sbjct: 145 HSMMRRRYGRIINITSIVGVVGNPGQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPG 204
Query: 208 FIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM 267
           FI S MT KL E  ++ I+  IP+ R G  EE+A    +LA + AA Y+TGQ L I+GGM
Sbjct: 205 FIKSAMTDKLNEKQKEAIMAMIPMKRMGIGEEIAFATVYLASDEAA-YLTGQTLHINGGM 263
Query: 268 VM 269
            M
Sbjct: 264 AM 265

>pdb|4IIN|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Helicobacter Pylori 26695 Complexed With Nad+ Length = 271

Iteration: 1
 Score =  187 bits (474), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 96/240 (40%), Positives = 147/240 (61%), Gaps = 1/240 (0%)
Query: 30  VVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEA 89
           ++TGAS+GIG  +A +L   G KV +NY  +++ A+ +  E+E  G +A     D + E+
Sbjct: 33  LITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASES 92
Query: 90  DVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXXXX 149
           D    I+T V + G +  L+NNAG+ RD L ++MK   +  VID NLT  F+  +     
Sbjct: 93  DFIEAIQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKV 152
Query: 150 XXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFI 209
                 G ++N+AS++G  GN+GQ NYSA+K G+I ++K+ A E A RNI  N++ PGFI
Sbjct: 153 MSKSRFGSVVNVASIIGERGNMGQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFI 212
Query: 210 ASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 269
            +DM A L ++L+   ++ IPL R G  +EVA  V FL L+  + YITG+ L ++GG+ M
Sbjct: 213 ETDMNANLKDELKADYVKNIPLNRLGSAKEVAEAVAFL-LSDHSSYITGETLKVNGGLYM 271

>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase Length = 226

Iteration: 1
 Score =  187 bits (474), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 109/245 (44%), Positives = 150/245 (61%), Gaps = 20/245 (8%)
Query: 23  NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFG 82
           N E  +A+VTGASRGIGRA+A +L   G KV +  A S   A+ +   + A+G + L   
Sbjct: 2   NFEGKIALVTGASRGIGRAIAETLAARGAKV-IGTATSENGAQAISDYLGANG-KGLML- 58
Query: 83  GDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLC 142
            +V+  A +ES+++     +G VDIL+NNAGITRD LLMRMK  +W D+I+ NL+ VF  
Sbjct: 59  -NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRL 117
Query: 143 TQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
           ++           GRII I          GQANY+AAKAG+IG +K++A+E ASR I VN
Sbjct: 118 SKAVMRAMMKKRHGRIITIG---------GQANYAAAKAGLIGFSKSLAREVASRGITVN 168
Query: 203 AIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLT 262
            +APGFI +       +D    IL ++P GR G  +E+A  V FLA + AA YITG+ L 
Sbjct: 169 VVAPGFIETS------DDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAA-YITGETLH 221
Query: 263 IDGGM 267
           ++GGM
Sbjct: 222 VNGGM 226

>pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg From Francisella Tularensis Length = 247

Iteration: 1
 Score =  183 bits (464), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 114/242 (47%), Positives = 149/242 (61%), Gaps = 8/242 (3%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA+VTGASRGIG  VA +L   G  V V  A S   AE+     +  G +A    G V  
Sbjct: 7   VALVTGASRGIGFEVAHALASKGATV-VGTATSQASAEKFENSXKEKGFKAR---GLVLN 62
Query: 88  EADVESMIKTAVDAWG---TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQ 144
            +D+ES+     +       +DIL+NNAGITRD L  R  + +WQ VI+ NL+ +F  ++
Sbjct: 63  ISDIESIQNFFAEIKAENLAIDILVNNAGITRDNLXXRXSEDEWQSVINTNLSSIFRXSK 122
Query: 145 XXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAI 204
                      GRII+I SVVG  GN GQ NY AAKAGVIG +K++A E ASRNI VN +
Sbjct: 123 ECVRGXXKKRWGRIISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSLAYEVASRNITVNVV 182
Query: 205 APGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTID 264
           APGFIA+D T KL ++ +  I  KIP G+ G+P+++A  V FLA +  A YITGQ L ++
Sbjct: 183 APGFIATDXTDKLTDEQKSFIATKIPSGQIGEPKDIAAAVAFLA-SEEAKYITGQTLHVN 241
Query: 265 GG 266
           GG
Sbjct: 242 GG 243

>pdb|3GK3|A Chain A, Crystal Structure Of Acetoacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 269

Iteration: 1
 Score =  174 bits (440), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 102/261 (39%), Positives = 144/261 (55%), Gaps = 2/261 (0%)
Query: 10  VATIEQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCK 69
           + T+E  T          VA VTG   G+G A++  L  AG  V V+++  +        
Sbjct: 9   MGTLEAQTQGPGSMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLM 68
Query: 70  EIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQ 129
               +G     +  DV+     E   +  +  +G VD+LINNAGITRD   M+M K  W 
Sbjct: 69  HERDAGRDFKAYAVDVADFESCERCAEKVLADFGKVDVLINNAGITRDATFMKMTKGDWD 128
Query: 130 DVIDLNLTGVFLCTQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKT 189
            V+  +L  +F  T+           GRI+NI SV G  G  GQANY++AKAG+ G TKT
Sbjct: 129 AVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAGIHGFTKT 188
Query: 190 VAKEYASRNINVNAIAPGFIASDMTAKLGED-LEKKILEKIPLGRYGQPEEVAGLVEFLA 248
           +A E A R I VN ++PG++A+ M   + +D LE KIL +IP+GR G+P+EVA L+ FL 
Sbjct: 189 LALETAKRGITVNTVSPGYLATAMVEAVPQDVLEAKILPQIPVGRLGRPDEVAALIAFLC 248
Query: 249 LNPAAGYITGQVLTIDGGMVM 269
            +  AG++TG  L I+GGM M
Sbjct: 249 SDD-AGFVTGADLAINGGMHM 268

>pdb|3AUS|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 In Ligand-Free Form Length = 269

Iteration: 1
 Score =  169 bits (429), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 96/243 (39%), Positives = 148/243 (60%), Gaps = 4/243 (1%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           V V+TG S G+GRA+A   G+   KV++NY  + +EA +  KE+E +GGQA+   GDV+K
Sbjct: 17  VVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAIIVQGDVTK 76
Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCT-QXX 146
           E DV ++++TA+  +GT+D++INNAG+        +    W  VID NLTG FL + +  
Sbjct: 77  EEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSHELSLDNWNKVIDTNLTGAFLGSREAI 136
Query: 147 XXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
                    G +IN++SV  ++      +Y+A+K G+  +T+T+A EYA + I VN I P
Sbjct: 137 KYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGP 196
Query: 207 GFIASDMTA-KLGEDLEKKILEK-IPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTID 264
           G + + + A K  + +++  +E  IP+G  G+PEEVA +  FLA +  A Y+TG  L  D
Sbjct: 197 GAMNTPINAEKFADPVQRADVESMIPMGYIGKPEEVAAVAAFLA-SSQASYVTGITLFAD 255
Query: 265 GGM 267
           GGM
Sbjct: 256 GGM 258

>pdb|3AY7|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 G259a Mutant Length = 269

Iteration: 1
 Score =  169 bits (428), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 96/243 (39%), Positives = 148/243 (60%), Gaps = 4/243 (1%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           V V+TG S G+GRA+A   G+   KV++NY  + +EA +  KE+E +GGQA+   GDV+K
Sbjct: 17  VVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAIIVQGDVTK 76
Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCT-QXX 146
           E DV ++++TA+  +GT+D++INNAG+        +    W  VID NLTG FL + +  
Sbjct: 77  EEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSHELSLDNWNKVIDTNLTGAFLGSREAI 136
Query: 147 XXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
                    G +IN++SV  ++      +Y+A+K G+  +T+T+A EYA + I VN I P
Sbjct: 137 KYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGP 196
Query: 207 GFIASDMTA-KLGEDLEKKILEK-IPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTID 264
           G + + + A K  + +++  +E  IP+G  G+PEEVA +  FLA +  A Y+TG  L  D
Sbjct: 197 GAMNTPINAEKFADPVQRADVESMIPMGYIGKPEEVAAVAAFLA-SSQASYVTGITLFAD 255
Query: 265 GGM 267
           GGM
Sbjct: 256 GGM 258

>pdb|3AY6|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 A258f Mutant In Complex With Nadh And D-Glucose Length = 269

Iteration: 1
 Score =  169 bits (428), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 96/243 (39%), Positives = 148/243 (60%), Gaps = 4/243 (1%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           V V+TG S G+GRA+A   G+   KV++NY  + +EA +  KE+E +GGQA+   GDV+K
Sbjct: 17  VVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAIIVQGDVTK 76
Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCT-QXX 146
           E DV ++++TA+  +GT+D++INNAG+        +    W  VID NLTG FL + +  
Sbjct: 77  EEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSHELSLDNWNKVIDTNLTGAFLGSREAI 136
Query: 147 XXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
                    G +IN++SV  ++      +Y+A+K G+  +T+T+A EYA + I VN I P
Sbjct: 137 KYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGP 196
Query: 207 GFIASDMTA-KLGEDLEKKILEK-IPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTID 264
           G + + + A K  + +++  +E  IP+G  G+PEEVA +  FLA +  A Y+TG  L  D
Sbjct: 197 GAMNTPINAEKFADPVQRADVESMIPMGYIGKPEEVAAVAAFLA-SSQASYVTGITLFAD 255
Query: 265 GGM 267
           GGM
Sbjct: 256 GGM 258

>pdb|2NTN|A Chain A, Crystal Structure Of Maba-c60v/g139a/s144l Length = 267

Iteration: 1
 Score =  166 bits (419), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 100/242 (41%), Positives = 141/242 (58%), Gaps = 17/242 (7%)
Query: 30  VVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVS-KE 88
           +VTG +RGIG A+A  L   G KV V +                SG     FG +V   +
Sbjct: 39  LVTGGNRGIGLAIAQRLAADGHKVAVTH--------------RGSGAPKGLFGVEVDVTD 84
Query: 89  ADVESMIKTAVDAW-GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXX 147
           +D      TAV+   G V++L++NAG++ D  LMRM + +++ VI+ NLTG F   Q   
Sbjct: 85  SDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRAS 144
Query: 148 XXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
                   GR+I IASV GL G   QANY+A+KAGVIG+ +++A+E +  N+  N +APG
Sbjct: 145 RSMQRNKFGRMIFIASVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPG 204
Query: 208 FIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM 267
           +I +DMT  L E +++  L+ IP  R G P EVAG+V FLA   A+ YI+G V+ +DGGM
Sbjct: 205 YIDTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDAS-YISGAVIPVDGGM 263
Query: 268 VM 269
            M
Sbjct: 264 GM 265

>pdb|1UZM|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score =  164 bits (415), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 99/242 (40%), Positives = 140/242 (57%), Gaps = 17/242 (7%)
Query: 30  VVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVS-KE 88
           +VTG +RGIG A+A  L   G KV V +                SG     FG +V   +
Sbjct: 19  LVTGGNRGIGLAIAQRLAADGHKVAVTH--------------RGSGAPKGLFGVEVDVTD 64
Query: 89  ADVESMIKTAVDAW-GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXX 147
           +D      TAV+   G V++L++NAG++ D  LMRM + +++ VI+ NLTG F   Q   
Sbjct: 65  SDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRAS 124
Query: 148 XXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
                   GR+I I SV GL G   QANY+A+KAGVIG+ +++A+E +  N+  N +APG
Sbjct: 125 RSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPG 184
Query: 208 FIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM 267
           +I +DMT  L E +++  L+ IP  R G P EVAG+V FLA   A+ YI+G V+ +DGGM
Sbjct: 185 YIDTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDAS-YISGAVIPVDGGM 243
Query: 268 VM 269
            M
Sbjct: 244 GM 245

>pdb|2PD6|A Chain A, Structure Of Human Hydroxysteroid Dehydrogenase Type 8, Hsd17b8 Length = 264

Iteration: 1
 Score =  164 bits (414), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 102/259 (39%), Positives = 147/259 (56%), Gaps = 14/259 (5%)
Query: 22  QN-VEAPVAVVTGASRGIGRAVATSLGKAGCKVL-VNYARSSKEAEEVCKEIEASG---- 75
           QN + + +A+VTGA  GIGRAV+  L   G  V   +  R++  A+E  + +   G    
Sbjct: 2   QNRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAA--AQETVRLLGGPGSKEG 59
Query: 76  ---GQALTFGGDVSKEADVESMIKTAVDAWG-TVDILINNAGITRDTLLMRMKKSQWQDV 131
              G    F  DVS+      +++     +     ++++ AGIT+D  L+ M +  W  V
Sbjct: 60  PPRGNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKV 119
Query: 132 IDLNLTGVFLCTQXXXXXXXXX-XXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTV 190
           I +NL G FL TQ            G IINI+S+VG VGN+GQ NY+A+KAGVIGLT+T 
Sbjct: 120 IAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTA 179
Query: 191 AKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALN 250
           A+E     I  N++ PGFIA+ MT K+ + +  KI E IP+G  G PE+VA +V FLA +
Sbjct: 180 ARELGRHGIRCNSVLPGFIATPMTQKVPQKVVDKITEMIPMGHLGDPEDVADVVAFLA-S 238
Query: 251 PAAGYITGQVLTIDGGMVM 269
             +GYITG  + + GG+ M
Sbjct: 239 EDSGYITGTSVEVTGGLFM 257

>pdb|1UZL|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score =  162 bits (409), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 96/242 (39%), Positives = 136/242 (56%), Gaps = 17/242 (7%)
Query: 30  VVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFG--GDVSK 87
           +VTG +RGIG A+A  L   G KV V +                SG     FG   DV+ 
Sbjct: 19  LVTGGNRGIGLAIAQRLAADGHKVAVTH--------------RGSGAPKGLFGVECDVTD 64
Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXX 147
              V+       +  G V++L++NAG++ D  LMRM + +++ VI+ NLTG F   Q   
Sbjct: 65  SDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRAS 124
Query: 148 XXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
                   GR+I I SV G  G   QANY+A+KAGVIG+ +++A+E +  N+  N +APG
Sbjct: 125 RSMQRNKFGRMIFIGSVSGSWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPG 184
Query: 208 FIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM 267
           +I +DMT  L E +++  L+ IP  R G P EVAG+V FLA   A+ YI+G V+ +DGGM
Sbjct: 185 YIDTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDAS-YISGAVIPVDGGM 243
Query: 268 VM 269
            M
Sbjct: 244 GM 245

>pdb|4IIU|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Escherichia Coli Strain Cft073 Complexed With Nadp+ At 2.1 A Resolution Length = 267

Iteration: 1
 Score =  161 bits (408), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 97/240 (40%), Positives = 135/240 (56%), Gaps = 3/240 (1%)
Query: 30  VVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEA 89
           +VTGAS+GIGRA+A  L   G  + V+Y R +  A+E    I A+GG       DV+   
Sbjct: 30  LVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANRE 89
Query: 90  DVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXXXX 149
               +++  +   G    +++NAGI RD     +    W  VI  NL   +   Q     
Sbjct: 90  QCREVLEHEIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMP 149
Query: 150 XXXXXXG-RIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGF 208
                 G RII ++SV G++GN GQ NYSAAKAG+IG TK +A E A R I VN IAPG 
Sbjct: 150 MIGARQGGRIITLSSVSGVMGNRGQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGL 209
Query: 209 IASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMV 268
           I + M  ++ E   K+ +  IP+ R GQ EEVAGL  +L ++  AGY+T QV++I+GGM+
Sbjct: 210 IDTGMI-EMEESALKEAMSMIPMKRMGQAEEVAGLASYL-MSDIAGYVTRQVISINGGML 267

>pdb|1RWB|A Chain A, Cooperative Effect Of Two Surface Amino Acid Mutations (Q252l And E170k) Of Glucose Dehydrogenase From Bacillus Megaterium Iwg3 For The Stabilization Of Oligomeric State Length = 261

Iteration: 1
 Score =  160 bits (405), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 93/251 (37%), Positives = 147/251 (58%), Gaps = 4/251 (1%)
Query: 22  QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTF 81
           +++E  V V+TG+S G+G+++A        KV+VNY     EA  V +EI+  GG+A+  
Sbjct: 3   KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAV 62
Query: 82  GGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFL 141
            GDV+ E+DV +++++A+  +G +D++INNAG+        M  S W  VID NLTG FL
Sbjct: 63  KGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFL 122
Query: 142 CT-QXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNIN 200
            + +           G +IN++SV   +      +Y+A+K G+  +TKT+A EYA + I 
Sbjct: 123 GSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTKTLALEYAPKGIR 182
Query: 201 VNAIAPGFIASDMTAKLGEDLEKK--ILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITG 258
           VN I PG I + + A+   D E++  +   IP+G  G+PEE+A +  +LA +  A Y+TG
Sbjct: 183 VNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLA-SSEASYVTG 241
Query: 259 QVLTIDGGMVM 269
             L  DGGM +
Sbjct: 242 ITLFADGGMTL 252

>pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Sinorhizobium Meliloti Length = 267

Iteration: 1
 Score =  159 bits (402), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 104/243 (42%), Positives = 143/243 (58%), Gaps = 6/243 (2%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA+VTGASRGIG A+A  L   G  V++NYA  +  AEEV  +IEA+GG+ALT   DVS 
Sbjct: 29  VAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSD 88
Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXX 147
            A V  +  TA +A+G VD+L+NNAGI   T +     + +  VI +NL G F   +   
Sbjct: 89  PAAVRRLFATAEEAFGGVDVLVNNAGIXPLTTIAETGDAVFDRVIAVNLKGTFNTLR--E 146
Query: 148 XXXXXXXXGRIINIA-SVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
                   GRIIN + S VGL+ +     Y+AAKAGV   T  ++KE   R+I VNA+AP
Sbjct: 147 AAQRLRVGGRIINXSTSQVGLL-HPSYGIYAAAKAGVEAXTHVLSKELRGRDITVNAVAP 205
Query: 207 GFIASDMTAKLGEDLEKKILEKI-PLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDG 265
           G  A+D+  +   D  +    K+ PL R G P+++AG V FLA  P   ++ GQVL  +G
Sbjct: 206 GPTATDLFLEGKSDEVRDRFAKLAPLERLGTPQDIAGAVAFLA-GPDGAWVNGQVLRANG 264
Query: 266 GMV 268
           G++
Sbjct: 265 GII 267

>pdb|1GEE|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l Complexed With Nad+ Length = 261

Iteration: 1
 Score =  159 bits (401), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 92/251 (36%), Positives = 147/251 (58%), Gaps = 4/251 (1%)
Query: 22  QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTF 81
           +++E  V V+TG+S G+G+++A        KV+VNY     EA  V +EI+  GG+A+  
Sbjct: 3   KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAV 62
Query: 82  GGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFL 141
            GDV+ E+DV +++++A+  +G +D++INNAG+        M  S W  VID NLTG FL
Sbjct: 63  KGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFL 122
Query: 142 CT-QXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNIN 200
            + +           G +IN++SV   +      +Y+A+K G+  +T+T+A EYA + I 
Sbjct: 123 GSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIR 182
Query: 201 VNAIAPGFIASDMTAKLGEDLEKK--ILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITG 258
           VN I PG I + + A+   D E++  +   IP+G  G+PEE+A +  +LA +  A Y+TG
Sbjct: 183 VNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLA-SSEASYVTG 241
Query: 259 QVLTIDGGMVM 269
             L  DGGM +
Sbjct: 242 ITLFADGGMTL 252

>pdb|1G6K|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant E96a Complexed With Nad+ Length = 261

Iteration: 1
 Score =  158 bits (400), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 92/249 (36%), Positives = 146/249 (58%), Gaps = 4/249 (1%)
Query: 22  QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTF 81
           +++E  V V+TG+S G+G+++A        KV+VNY     EA  V +EI+  GG+A+  
Sbjct: 3   KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAV 62
Query: 82  GGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFL 141
            GDV+ E+DV +++++A+  +G +D++INNAG+        M  S W  VID NLTG FL
Sbjct: 63  KGDVTVESDVINLVQSAIKEFGKLDVMINNAGLANPVSSHEMSLSDWNKVIDTNLTGAFL 122
Query: 142 CT-QXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNIN 200
            + +           G +IN++SV   +      +Y+A+K G+  +T+T+A EYA + I 
Sbjct: 123 GSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIR 182
Query: 201 VNAIAPGFIASDMTAKLGEDLEKK--ILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITG 258
           VN I PG I + + A+   D E++  +   IP+G  G+PEE+A +  +LA +  A Y+TG
Sbjct: 183 VNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLA-SSEASYVTG 241
Query: 259 QVLTIDGGM 267
             L  DGGM
Sbjct: 242 ITLFADGGM 250

>pdb|1GCO|A Chain A, Crystal Structure Of Glucose Dehydrogenase Complexed With Nad+ Length = 261

Iteration: 1
 Score =  158 bits (399), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 92/249 (36%), Positives = 146/249 (58%), Gaps = 4/249 (1%)
Query: 22  QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTF 81
           +++E  V V+TG+S G+G+++A        KV+VNY     EA  V +EI+  GG+A+  
Sbjct: 3   KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAV 62
Query: 82  GGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFL 141
            GDV+ E+DV +++++A+  +G +D++INNAG+        M  S W  VID NLTG FL
Sbjct: 63  KGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFL 122
Query: 142 CT-QXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNIN 200
            + +           G +IN++SV   +      +Y+A+K G+  +T+T+A EYA + I 
Sbjct: 123 GSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIR 182
Query: 201 VNAIAPGFIASDMTAKLGEDLEKK--ILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITG 258
           VN I PG I + + A+   D E++  +   IP+G  G+PEE+A +  +LA +  A Y+TG
Sbjct: 183 VNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLA-SSEASYVTG 241
Query: 259 QVLTIDGGM 267
             L  DGGM
Sbjct: 242 ITLFADGGM 250

>pdb|3EZL|A Chain A, Crystal Structure Of Acetyacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 256

Iteration: 1
 Score =  157 bits (397), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 87/242 (35%), Positives = 135/242 (55%), Gaps = 1/242 (0%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           +A VTG   GIG ++   L K G +V+     +S    +  ++ +A G       G+V  
Sbjct: 15  IAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGD 74
Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXX 147
               +          G +D+L+NNAGITRD +  +M +  WQ VID NLT +F  T+   
Sbjct: 75  WDSTKQAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVI 134
Query: 148 XXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
                   GRIINI+SV G  G  GQ NYS AKAG+ G T ++A+E A++ + VN ++PG
Sbjct: 135 DGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPG 194
Query: 208 FIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM 267
           +I +DM   +  D+ +KI+  IP+ R G P+E+  +V +LA +  +G+ TG   +++GG+
Sbjct: 195 YIGTDMVKAIRPDVLEKIVATIPVRRLGSPDEIGSIVAWLA-SEESGFSTGADFSLNGGL 253
Query: 268 VM 269
            M
Sbjct: 254 HM 255

>pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida Tropicalis Peroxisomal Multifunctional Enzyme Type 2 Length = 604

Iteration: 1
 Score =  154 bits (389), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 92/241 (38%), Positives = 136/241 (56%), Gaps = 17/241 (7%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           V ++TGA  G+G+  A    K G KV+VN     K+A +   EI+A+GG+A     DV+K
Sbjct: 324 VVLITGAGAGLGKEYAKWFAKYGAKVVVN---DFKDATKTVDEIKAAGGEAWPDQHDVAK 380
Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXX 147
             D E++IK  +D +GT+DIL+NNAGI RD    +M K +W  V  ++L G F  ++   
Sbjct: 381 --DSEAIIKNVIDKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAW 438
Query: 148 XXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
                   GRIINI S  G+ GN GQANYS++KAG++GL+KT+A E A  NI VN +AP 
Sbjct: 439 PYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAP- 497
Query: 208 FIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM 267
              + MT  +  + +K +            ++VA L+ +L  +     +TG+   I GG 
Sbjct: 498 HAETAMTLSIMREQDKNLY---------HADQVAPLLVYLGTDDVP--VTGETFEIGGGW 546
Query: 268 V 268
           +
Sbjct: 547 I 547

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score =  152 bits (384), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 97/268 (36%), Positives = 142/268 (52%), Gaps = 17/268 (6%)
Query: 13  IEQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIE 72
           + + ++ A Q+ E  VA+VTGA+ GIG  +A  LGK G +V V  AR  +      KE+ 
Sbjct: 15  VPRGSHMATQDSE--VALVTGATSGIGLEIARRLGKEGLRVFV-CARGEEGLRTTLKELR 71
Query: 73  ASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVI 132
            +G +A     DV    ++E+++   V+ +G VD+L+NNAG         +    W DV+
Sbjct: 72  EAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVV 131
Query: 133 DLNLTGVFLCTQXXXXX--XXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTV 190
           + NLTGVF  T+             GRI+NIAS  G  G +  A YSA+K GV+G TK +
Sbjct: 132 ETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKAL 191
Query: 191 AKEYASRNINVNAIAPGFIASDMTAKLGEDLE-----------KKILEKIPLGRYGQPEE 239
             E A   I VNA+ PGF+ + M A + E               +I  ++P+GRY QP E
Sbjct: 192 GLELARTGITVNAVCPGFVETPMAASVREHFSDIWEVSTEEAFDRITARVPIGRYVQPSE 251
Query: 240 VAGLVEFLALNPAAGYITGQVLTIDGGM 267
           VA +V +L + P A  +T Q L + GG+
Sbjct: 252 VAEMVAYL-IGPGAAAVTAQALNVCGGL 278

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score =  152 bits (384), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 97/268 (36%), Positives = 142/268 (52%), Gaps = 17/268 (6%)
Query: 13  IEQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIE 72
           + + ++ A Q+ E  VA+VTGA+ GIG  +A  LGK G +V V  AR  +      KE+ 
Sbjct: 11  VPRGSHMATQDSE--VALVTGATSGIGLEIARRLGKEGLRVFV-CARGEEGLRTTLKELR 67
Query: 73  ASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVI 132
            +G +A     DV    ++E+++   V+ +G VD+L+NNAG         +    W DV+
Sbjct: 68  EAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVV 127
Query: 133 DLNLTGVFLCTQXXXXX--XXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTV 190
           + NLTGVF  T+             GRI+NIAS  G  G +  A YSA+K GV+G TK +
Sbjct: 128 ETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKAL 187
Query: 191 AKEYASRNINVNAIAPGFIASDMTAKLGEDLE-----------KKILEKIPLGRYGQPEE 239
             E A   I VNA+ PGF+ + M A + E               +I  ++P+GRY QP E
Sbjct: 188 GLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSE 247
Query: 240 VAGLVEFLALNPAAGYITGQVLTIDGGM 267
           VA +V +L + P A  +T Q L + GG+
Sbjct: 248 VAEMVAYL-IGPGAAAVTAQALNVCGGL 274

>pdb|4HP8|A Chain A, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate 3-Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506435) With Bound Nadp Length = 247

Iteration: 1
 Score =  152 bits (383), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 97/249 (38%), Positives = 142/249 (57%), Gaps = 12/249 (4%)
Query: 23  NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFG 82
           ++E   A+VTGA+ G+G+A+A  L  AG +V+    R+  E  ++   I   GG A    
Sbjct: 6   SLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDI---IAKDGGNASALL 62
Query: 83  GDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLC 142
            D    AD  +   +  DA    DIL+NNAGI R    +   +  W +V+D+NL  +F  
Sbjct: 63  IDF---ADPLAAKDSFTDA--GFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFT 117
Query: 143 TQXXXXXXXXX-XXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINV 201
           TQ            G+++NIAS++   G I   +Y+AAK GV GLTK +A E+A++ INV
Sbjct: 118 TQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTAAKHGVAGLTKLLANEWAAKGINV 177
Query: 202 NAIAPGFIASDMTAKLGEDL--EKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQ 259
           NAIAPG+I ++ T  L  D    K ILE+IP GR+G  E++AG   FL+ + AA Y+ G 
Sbjct: 178 NAIAPGYIETNNTEALRADAARNKAILERIPAGRWGHSEDIAGAAVFLS-SAAADYVHGA 236
Query: 260 VLTIDGGMV 268
           +L +DGG +
Sbjct: 237 ILNVDGGWL 245

>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281

Iteration: 1
 Score =  151 bits (382), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 97/268 (36%), Positives = 142/268 (52%), Gaps = 17/268 (6%)
Query: 13  IEQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIE 72
           + + ++ A Q+ E  VA+VTGA+ GIG  +A  LGK G +V V  AR  +      KE+ 
Sbjct: 15  VPRGSHMATQDSE--VALVTGATSGIGLEIARRLGKEGLRVFV-CARGEEGLRTTLKELR 71
Query: 73  ASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVI 132
            +G +A     DV    ++E+++   V+ +G VD+L+NNAG         +    W DV+
Sbjct: 72  EAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVV 131
Query: 133 DLNLTGVFLCTQXXXXX--XXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTV 190
           + NLTGVF  T+             GRI+NIAS  G  G +  A YSA+K GV+G TK +
Sbjct: 132 ETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKAL 191
Query: 191 AKEYASRNINVNAIAPGFIASDMTAKLGEDLE-----------KKILEKIPLGRYGQPEE 239
             E A   I VNA+ PGF+ + M A + E               +I  ++P+GRY QP E
Sbjct: 192 GLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSE 251
Query: 240 VAGLVEFLALNPAAGYITGQVLTIDGGM 267
           VA +V +L + P A  +T Q L + GG+
Sbjct: 252 VAEMVAYL-IGPGAAAVTAQALNVCGGL 278

>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score =  151 bits (382), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 97/268 (36%), Positives = 142/268 (52%), Gaps = 17/268 (6%)
Query: 13  IEQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIE 72
           + + ++ A Q+ E  VA+VTGA+ GIG  +A  LGK G +V V  AR  +      KE+ 
Sbjct: 11  VPRGSHMATQDSE--VALVTGATSGIGLEIARRLGKEGLRVFV-CARGEEGLRTTLKELR 67
Query: 73  ASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVI 132
            +G +A     DV    ++E+++   V+ +G VD+L+NNAG         +    W DV+
Sbjct: 68  EAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRLGGGATAELADELWLDVV 127
Query: 133 DLNLTGVFLCTQXXXXX--XXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTV 190
           + NLTGVF  T+             GRI+NIAS  G  G +  A YSA+K GV+G TK +
Sbjct: 128 ETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKAL 187
Query: 191 AKEYASRNINVNAIAPGFIASDMTAKLGEDLE-----------KKILEKIPLGRYGQPEE 239
             E A   I VNA+ PGF+ + M A + E               +I  ++P+GRY QP E
Sbjct: 188 GLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSE 247
Query: 240 VAGLVEFLALNPAAGYITGQVLTIDGGM 267
           VA +V +L + P A  +T Q L + GG+
Sbjct: 248 VAEMVAYL-IGPGAAAVTAQALNVCGGL 274

>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281

Iteration: 1
 Score =  151 bits (382), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 97/268 (36%), Positives = 142/268 (52%), Gaps = 17/268 (6%)
Query: 13  IEQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIE 72
           + + ++ A Q+ E  VA+VTGA+ GIG  +A  LGK G +V V  AR  +      KE+ 
Sbjct: 15  VPRGSHMATQDSE--VALVTGATSGIGLEIARRLGKEGLRVFV-CARGEEGLRTTLKELR 71
Query: 73  ASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVI 132
            +G +A     DV    ++E+++   V+ +G VD+L+NNAG         +    W DV+
Sbjct: 72  EAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRLGGGATAELADELWLDVV 131
Query: 133 DLNLTGVFLCTQXXXXX--XXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTV 190
           + NLTGVF  T+             GRI+NIAS  G  G +  A YSA+K GV+G TK +
Sbjct: 132 ETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKAL 191
Query: 191 AKEYASRNINVNAIAPGFIASDMTAKLGEDLE-----------KKILEKIPLGRYGQPEE 239
             E A   I VNA+ PGF+ + M A + E               +I  ++P+GRY QP E
Sbjct: 192 GLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSE 251
Query: 240 VAGLVEFLALNPAAGYITGQVLTIDGGM 267
           VA +V +L + P A  +T Q L + GG+
Sbjct: 252 VAEMVAYL-IGPGAAAVTAQALNVCGGL 278

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score =  151 bits (382), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 97/268 (36%), Positives = 142/268 (52%), Gaps = 17/268 (6%)
Query: 13  IEQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIE 72
           + + ++ A Q+ E  VA+VTGA+ GIG  +A  LGK G +V V  AR  +      KE+ 
Sbjct: 15  VPRGSHMATQDSE--VALVTGATSGIGLEIARRLGKEGLRVFV-CARGEEGLRTTLKELR 71
Query: 73  ASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVI 132
            +G +A     DV    ++E+++   V+ +G VD+L+NNAG         +    W DV+
Sbjct: 72  EAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVV 131
Query: 133 DLNLTGVFLCTQXXXXX--XXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTV 190
           + NLTGVF  T+             GRI+NIAS  G  G +  A YSA+K GV+G TK +
Sbjct: 132 ETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGLVHAAPYSASKHGVVGFTKAL 191
Query: 191 AKEYASRNINVNAIAPGFIASDMTAKLGEDLE-----------KKILEKIPLGRYGQPEE 239
             E A   I VNA+ PGF+ + M A + E               +I  ++P+GRY QP E
Sbjct: 192 GLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSE 251
Query: 240 VAGLVEFLALNPAAGYITGQVLTIDGGM 267
           VA +V +L + P A  +T Q L + GG+
Sbjct: 252 VAEMVAYL-IGPGAAAVTAQALNVCGGL 278

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score =  150 bits (378), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 97/261 (37%), Positives = 138/261 (52%), Gaps = 17/261 (6%)
Query: 20  AAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQAL 79
           A Q+ E  VA+VTGA+ GIG  +A  LGK G +V V  AR  +      KE+  +G +A 
Sbjct: 2   ATQDSE--VALVTGATSGIGLEIARRLGKEGLRVFV-CARGEEGLRTTLKELREAGVEAD 58
Query: 80  TFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGV 139
               DV    ++E+++   V+ +G VD+L+NNAG         +    W DV++ NLTGV
Sbjct: 59  GRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGV 118
Query: 140 FLCTQXXXXX--XXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASR 197
           F  T+             GRI+NIAS  G  G +  A YSA+K GV+G TK +  E A  
Sbjct: 119 FRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELART 178
Query: 198 NINVNAIAPGFIASDMTAKLGEDLE-----------KKILEKIPLGRYGQPEEVAGLVEF 246
            I VNA+ PGF+ + M A + E               +I  ++P+GRY QP EVA +V +
Sbjct: 179 GITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAY 238
Query: 247 LALNPAAGYITGQVLTIDGGM 267
           L + P A  +T Q L + GG+
Sbjct: 239 L-IGPGAAAVTAQALNVCGGL 258

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score =  149 bits (376), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 96/268 (35%), Positives = 142/268 (52%), Gaps = 17/268 (6%)
Query: 13  IEQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIE 72
           + + ++ A Q+ E  VA+VTGA+ GIG  +A  LGK G +V V  AR  +      KE+ 
Sbjct: 15  VPRGSHMATQDSE--VALVTGATSGIGLEIARRLGKEGLRVFV-CARGEEGLRTTLKELR 71
Query: 73  ASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVI 132
            +G +A     DV    ++E+++   V+ +G VD+L+NNAG         +    W DV+
Sbjct: 72  EAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVV 131
Query: 133 DLNLTGVFLCTQXXXXX--XXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTV 190
           + NLTGVF  T+             GRI+NIAS  G  G +  A YSA+K GV+G TK +
Sbjct: 132 ETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKAL 191
Query: 191 AKEYASRNINVNAIAPGFIASDMTAKLGEDLE-----------KKILEKIPLGRYGQPEE 239
             E A   I VNA+ PG++ + M A + E               +I  ++P+GRY QP E
Sbjct: 192 GLELARTGITVNAVCPGWVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSE 251
Query: 240 VAGLVEFLALNPAAGYITGQVLTIDGGM 267
           VA +V +L + P A  +T Q L + GG+
Sbjct: 252 VAEMVAYL-IGPGAAAVTAQALNVCGGL 278

>pdb|1ULS|A Chain A, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8 Length = 245

Iteration: 1
 Score =  147 bits (370), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 94/240 (39%), Positives = 133/240 (55%), Gaps = 8/240 (3%)
Query: 30  VVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEA 89
           ++TGA+ GIGRA      K G +++        E   + +  EA G   +    DV+  A
Sbjct: 9   LITGAAHGIGRATLELFAKEGARLVA----CDIEEGPLREAAEAVGAHPVV--XDVADPA 62
Query: 90  DVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXXXX 149
            VE     A+   G +D +++ AGITRD    +     W+ V+ +NLTG FL  +     
Sbjct: 63  SVERGFAEALAHLGRLDGVVHYAGITRDNFHWKXPLEDWELVLRVNLTGSFLVAKAASEA 122
Query: 150 XXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFI 209
                 G I+  AS V L GN+GQANY+A+ AGV+GLT+T+A E     I VN +APGFI
Sbjct: 123 XREKNPGSIVLTASRVYL-GNLGQANYAASXAGVVGLTRTLALELGRWGIRVNTLAPGFI 181
Query: 210 ASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 269
            +  TAK+ E + +K +   PLGR G+P EVA    FL L+  + +ITGQVL +DGG  +
Sbjct: 182 ETRXTAKVPEKVREKAIAATPLGRAGKPLEVAYAALFL-LSDESSFITGQVLFVDGGRTI 240

>pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 276

Iteration: 1
 Score =  146 bits (368), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 94/241 (39%), Positives = 134/241 (55%), Gaps = 6/241 (2%)
Query: 29  AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKE 88
           A++TGAS GIG+ VA +  +AG +V V  AR S   + V  EI   GG+AL    DV++ 
Sbjct: 35  ALITGASTGIGKKVALAYAEAGAQVAVA-ARHSDALQVVADEIAGVGGKALPIRCDVTQP 93
Query: 89  ADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXXX 148
             V  M+       G +DI + NAGI     ++ M   ++Q + D N+TGVFL  Q    
Sbjct: 94  DQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAAR 153
Query: 149 XXXXX-XXGRIINIASVVGLVGNIGQ--ANYSAAKAGVIGLTKTVAKEYASRNINVNAIA 205
                   G II  AS+ G + NI Q  ++Y  +KA V+ LTK +A E A   I VN+++
Sbjct: 154 AMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVS 213
Query: 206 PGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDG 265
           PG+I +++   L  D       KIPLGR G+PEE+ GL  +LA + A+ Y+TG  + IDG
Sbjct: 214 PGYIRTELVEPLA-DYHALWEPKIPLGRMGRPEELTGLYLYLA-SAASSYMTGSDIVIDG 271
Query: 266 G 266
           G
Sbjct: 272 G 272

>pdb|3UF0|A Chain A, Crystal Structure Of A Putative Nad(P) Dependent Gluconate 5- Dehydrogenase From Beutenbergia Cavernae(Efi Target Efi-502044) With Bound Nadp (Low Occupancy) Length = 273

Iteration: 1
 Score =  146 bits (368), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 93/244 (38%), Positives = 137/244 (56%), Gaps = 10/244 (4%)
Query: 29  AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKE 88
           AVVTGA  GIGRA+A    +AG  VL  + R+    +EV  EI   GG A     D+   
Sbjct: 34  AVVTGAGSGIGRAIAHGYARAGAHVLA-WGRTDG-VKEVADEIADGGGSAEAVVADL--- 88
Query: 89  ADVESMIKTAVDAWGT--VDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXX 146
           AD+E     A +   T  VD+L+NNAGI        +   +W++V+ +NL   ++ ++  
Sbjct: 89  ADLEGAANVAEELAATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSF 148
Query: 147 XXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
                    GRI+ IAS++   G    A Y+A+K  V+GLT+ +A E+A R + VNA+AP
Sbjct: 149 GTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAP 208
Query: 207 GFIASDMTAKLGEDLEK--KILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTID 264
           G++ +  TA L  D E+  +I  +IP GR+  PE++ G   FLA + AA Y+ GQVL +D
Sbjct: 209 GYVVTANTAALRADDERAAEITARIPAGRWATPEDMVGPAVFLA-SDAASYVHGQVLAVD 267
Query: 265 GGMV 268
           GG +
Sbjct: 268 GGWL 271

>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293

Iteration: 1
 Score =  145 bits (367), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 93/262 (35%), Positives = 136/262 (51%), Gaps = 4/262 (1%)
Query: 10  VATIEQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCK 69
           V + E A  +   ++ A   +VTG ++GIGR +AT   +AG  V V  ARS +E   V  
Sbjct: 25  VESAEPAERKVMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVA-ARSPRELSSVTA 83
Query: 70  EI-EASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQW 128
           E+ E   G  +    DVS         +T VDA+G +D++  NAGI  +  L  M   Q 
Sbjct: 84  ELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGALDVVCANAGIFPEARLDTMTPEQL 143
Query: 129 QDVIDLNLTGVFLCTQXXXXXXXXXXXGRIINIASVVGLV-GNIGQANYSAAKAGVIGLT 187
            +V+D+N+ G     Q           GR+I  +S+ G V G  G ++Y A+KA  +G  
Sbjct: 144 SEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYGASKAAQLGFM 203
Query: 188 KTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFL 247
           +T A E A R + VNAI PG I ++    +GE+    +   IP+G  G P ++  L  FL
Sbjct: 204 RTAAIELAPRGVTVNAILPGNILTEGLVDMGEEYISGMARSIPMGMLGSPVDIGHLAAFL 263
Query: 248 ALNPAAGYITGQVLTIDGGMVM 269
           A +  AGYITGQ + +DGG V+
Sbjct: 264 ATD-EAGYITGQAIVVDGGQVL 284

>pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog (Target Efi- 506402 From Salmonella Enterica, Unliganded Structure Length = 255

Iteration: 1
 Score =  144 bits (362), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 94/244 (38%), Positives = 136/244 (55%), Gaps = 7/244 (2%)
Query: 29  AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKE 88
           A+VTG++RG+G A A  L  AG +V++N  R++  AE V   +   G  A     DV+ E
Sbjct: 12  ALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESV-DTLTRKGYDAHGVAFDVTDE 70
Query: 89  ADVESMIKTAVDAWG-TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXX 147
             +E+   + +DA G  VDILINNAGI     ++ ++   WQ VID NLT  FL ++   
Sbjct: 71  LAIEAAF-SKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAA 129
Query: 148 XXXXXXXXG-RIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
                   G +IINI S+         A Y+AAK G+  LT ++A E+A  NI  NAI P
Sbjct: 130 KRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGP 189
Query: 207 GFIASDMTAKLGED--LEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTID 264
           G+I +DM   L ED   +  +    P  R+G+PEE+ G   FL+ + A+ YI GQ++ +D
Sbjct: 190 GYILTDMNTALIEDKQFDSWVKSSTPSQRWGRPEELIGTAIFLS-SKASDYINGQIIYVD 248
Query: 265 GGMV 268
           GG +
Sbjct: 249 GGWL 252

>pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506446) Length = 271

Iteration: 1
 Score =  144 bits (362), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 86/244 (35%), Positives = 139/244 (56%), Gaps = 8/244 (3%)
Query: 29  AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKE 88
           A+VTG+SRG+GRA+A  L  AG ++L+N    S+ A+ V +E    G  A     DV+ E
Sbjct: 29  ALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTV-QEFRNVGHDAEAVAFDVTSE 87
Query: 89  ADV-ESMIKTAVDAWG-TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXX 146
           +++ E+  +  +D  G  VDIL+NNAGI     ++ ++ + WQ VID NLT  F+  +  
Sbjct: 88  SEIIEAFAR--LDEQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREA 145
Query: 147 XXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
                    G+I+NI S+   +     A Y+ AK G+  LT+ +A E+A   I  NAI P
Sbjct: 146 AKRMIPRGYGKIVNIGSLTSELARATVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGP 205
Query: 207 GFIASDMTAKL--GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTID 264
           G++ +DM   L    + +  +  + P  R+G+P+E+ G   FL+ + A+ Y+ GQ++ +D
Sbjct: 206 GYMLTDMNQALIDNPEFDAWVKARTPAKRWGKPQELVGTAVFLSAS-ASDYVNGQIIYVD 264
Query: 265 GGMV 268
           GGM+
Sbjct: 265 GGML 268

>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267

Iteration: 1
 Score =  144 bits (362), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 90/245 (36%), Positives = 140/245 (57%), Gaps = 10/245 (4%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEI-EASGGQALTFGGDVS 86
           VA+VTG SRG+G  +A  L +AGC V+V  +R+ +EA E  +++ E  G + + F  DVS
Sbjct: 23  VALVTGGSRGLGFGIAQGLAEAGCSVVVA-SRNLEEASEAAQKLTEKYGVETMAFRCDVS 81
Query: 87  KEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXX 146
              +V+ +++   + +G +D ++N AGI R          +++ VI++NL G +   +  
Sbjct: 82  NYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREA 141
Query: 147 XXXXXXXXXGRIINIASVVGLVGNIGQAN---YSAAKAGVIGLTKTVAKEYASRNINVNA 203
                      IINI S+   V  +   N   Y+A+K GV  LTK +AKE+    I VN 
Sbjct: 142 FSLLRESDNPSIINIGSLT--VEEVTMPNISAYAASKGGVASLTKALAKEWGRYGIRVNV 199
Query: 204 IAPGFIASDMTAKLGEDLEK--KILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL 261
           IAPG+  + MT  +  D EK   +L++IPLGR G PE++ G+  FLA +  A Y+TGQ++
Sbjct: 200 IAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLA-SEEAKYVTGQII 258
Query: 262 TIDGG 266
            +DGG
Sbjct: 259 FVDGG 263

>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From Streptococcus Suis Type 2 Length = 291

Iteration: 1
 Score =  142 bits (359), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 85/254 (33%), Positives = 143/254 (56%), Gaps = 10/254 (3%)
Query: 23  NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFG 82
           +++  +A+VTGAS GIG A+A++  KAG  ++ N   + +  +      +A+G  A  + 
Sbjct: 31  SLKGKIALVTGASYGIGFAIASAYAKAGATIVFN-DINQELVDRGMAAYKAAGINAHGYV 89
Query: 83  GDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLC 142
            DV+ E  +++M+       G +DIL+NNAGI R   ++ M  +Q++ VID++L   F+ 
Sbjct: 90  CDVTDEDGIQAMVAQIESEVGIIDILVNNAGIIRRVPMIEMTAAQFRQVIDIDLNAPFIV 149
Query: 143 TQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
           ++           G+IINI S++  +G    + Y+AAK G+  LTK +A EY   NI  N
Sbjct: 150 SKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYGEANIQCN 209
Query: 203 AIAPGFIASDMTAKLGE--------DLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAG 254
            I PG+IA+  TA L E          ++ I+ K P  R+G+ E++ G   FLA + A+ 
Sbjct: 210 GIGPGYIATPQTAPLRELQKDGSRHPFDQFIIAKTPAARWGEAEDLMGPAVFLASD-ASN 268
Query: 255 YITGQVLTIDGGMV 268
           ++ G +L +DGG++
Sbjct: 269 FVNGHILYVDGGIL 282

>pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase Length = 260

Iteration: 1
 Score =  141 bits (356), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 94/256 (36%), Positives = 135/256 (52%), Gaps = 14/256 (5%)
Query: 24  VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGG-QALTFG 82
           ++  VAVVTG++ GIG  +AT+L   G  +++N    + E E+V   + A  G + L  G
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61
Query: 83  GDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLC 142
            D+SK   V  ++  AV   G +DIL+NNAGI    L+      +W  ++ LNL+ VF  
Sbjct: 62  ADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHG 121
Query: 143 TQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
           T            GRIINIAS  GLV +  ++ Y AAK GV+G TK  A E A + I  N
Sbjct: 122 TAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITAN 181
Query: 203 AIAPGFIASDMTAKLGEDLEKK------------ILEKIPLGRYGQPEEVAGLVEFLALN 250
           AI PG++ S +  K    L +K            + EK P  ++  PE++ G   FLA +
Sbjct: 182 AICPGWVRSPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLA-S 240
Query: 251 PAAGYITGQVLTIDGG 266
            AA  ITG  +++DGG
Sbjct: 241 DAAAQITGTTVSVDGG 256

>pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase Complexed With Nad+ Length = 260

Iteration: 1
 Score =  140 bits (353), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 93/256 (36%), Positives = 135/256 (52%), Gaps = 14/256 (5%)
Query: 24  VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGG-QALTFG 82
           ++  VAVVTG++ GIG  +AT+L   G  +++N    + E E+V   + A  G + L  G
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61
Query: 83  GDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLC 142
            D+SK   V  ++  AV   G +DIL+NNAGI    L+      +W  ++ LNL+ VF  
Sbjct: 62  ADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHG 121
Query: 143 TQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
           T            GRIINIAS  GLV +  ++ Y AAK GV+G TK  A E A + I  N
Sbjct: 122 TAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITAN 181
Query: 203 AIAPGFIASDMTAKLGEDLEKK------------ILEKIPLGRYGQPEEVAGLVEFLALN 250
           AI PG++ + +  K    L +K            + EK P  ++  PE++ G   FLA +
Sbjct: 182 AICPGWVRAPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLA-S 240
Query: 251 PAAGYITGQVLTIDGG 266
            AA  ITG  +++DGG
Sbjct: 241 DAAAQITGTTVSVDGG 256

>pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate Dehydrogenase Length = 260

Iteration: 1
 Score =  140 bits (353), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 93/256 (36%), Positives = 135/256 (52%), Gaps = 14/256 (5%)
Query: 24  VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGG-QALTFG 82
           ++  VAVVTG++ GIG  +AT+L   G  +++N    + E E+V   + A  G + L  G
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61
Query: 83  GDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLC 142
            D+SK   V  ++  AV   G +DIL+NNAGI    L+      +W  ++ LNL+ VF  
Sbjct: 62  ADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHG 121
Query: 143 TQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
           T            GRIINIAS  GLV +  ++ Y AAK GV+G TK  A E A + I  N
Sbjct: 122 TAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITAN 181
Query: 203 AIAPGFIASDMTAKLGEDLEKK------------ILEKIPLGRYGQPEEVAGLVEFLALN 250
           AI PG++ + +  K    L +K            + EK P  ++  PE++ G   FLA +
Sbjct: 182 AICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLA-S 240
Query: 251 PAAGYITGQVLTIDGG 266
            AA  ITG  +++DGG
Sbjct: 241 DAAAQITGTTVSVDGG 256

>pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From Alcaligenes Faecalis Length = 260

Iteration: 1
 Score =  138 bits (348), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 94/251 (37%), Positives = 135/251 (53%), Gaps = 14/251 (5%)
Query: 29  AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGG-QALTFGGDVSK 87
           AVVTG++ GIG A+AT L KAG  V++N     ++ E     +E+  G +A     D+S 
Sbjct: 7   AVVTGSTSGIGLAMATELAKAGADVVINGFGQPEDIERERSTLESKFGVKAYYLNADLSD 66
Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXX 147
                  I  A +A G +DIL+NNAGI     +      +W  +I LNL+ VF  T    
Sbjct: 67  AQATRDFIAKAAEALGGLDILVNNAGIQHTAPIEEFPVDKWNAIIALNLSAVFHGTAAAL 126
Query: 148 XXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
                   GRIINIAS  GLV ++ ++ Y AAK GV+GLTK  A E A + I  NAI PG
Sbjct: 127 PIMQKQGWGRIINIASAHGLVASVNKSAYVAAKHGVVGLTKVTALENAGKGITCNAICPG 186
Query: 208 FIASDMTAKL--------GEDLE---KKIL-EKIPLGRYGQPEEVAGLVEFLALNPAAGY 255
           ++ + +  K         G D+E   +++L EK P  ++  PE++ G   FL+ + AA  
Sbjct: 187 WVRTPLVEKQIEAISQQKGIDIEAAARELLAEKQPSLQFVTPEQLGGAAVFLS-SAAADQ 245
Query: 256 ITGQVLTIDGG 266
           +TG  L++DGG
Sbjct: 246 MTGTTLSLDGG 256

>pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM SINORHIZOBIUM Meliloti 1021 Length = 271

Iteration: 1
 Score =  136 bits (343), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 89/239 (37%), Positives = 129/239 (53%), Gaps = 5/239 (2%)
Query: 29  AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKE 88
           A VTG SRGIG A+A  L   G  V + Y  +++ A+ V  EIE +GG+A+    D    
Sbjct: 34  AFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDA 93
Query: 89  ADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXXX 148
             +E  I+  V+A G +DIL+N+AGI     L     + + +V  +N    F+  +    
Sbjct: 94  EAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVXAVNFRAPFVAIR--SA 151
Query: 149 XXXXXXXGRIINIAS-VVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
                  GRII I S +  LV   G + YSA+KA + GLTK +A++   R I VN + PG
Sbjct: 152 SRHLGDGGRIITIGSNLAELVPWPGISLYSASKAALAGLTKGLARDLGPRGITVNIVHPG 211
Query: 208 FIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGG 266
              +D     G+  E +  E+I  G YG+P+++AGLV +LA  P   ++TG  LTIDGG
Sbjct: 212 STDTDXNPADGDHAEAQ-RERIATGSYGEPQDIAGLVAWLA-GPQGKFVTGASLTIDGG 268

>pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From Pseudomonas Putida Length = 255

Iteration: 1
 Score =  136 bits (343), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 91/251 (36%), Positives = 131/251 (52%), Gaps = 15/251 (5%)
Query: 29  AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKE 88
           A+VTG++ GIG  +A  L +AG  +++N      +      EI   G +A+    D+S  
Sbjct: 7   ALVTGSTSGIGLGIAQVLARAGANIVLN---GFGDPAPALAEIARHGVKAVHHPADLSDV 63
Query: 89  ADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXXX 148
           A +E++   A   +G VDIL+NNAGI     + +     W  +I LNL+ VF  T+    
Sbjct: 64  AQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALP 123
Query: 149 XXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGF 208
                  GRIINIASV GLVG+ G+A Y AAK GV+GLTK V  E A+ N+  NAI PG+
Sbjct: 124 GMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGW 183
Query: 209 IAS--------DMTAKLGEDLEKK---ILEKIPLGRYGQPEEVAGLVEFLALNPAAGYIT 257
           + +        D  A  G+ L+ +   + EK P   +  PE +  LV FL  + A   + 
Sbjct: 184 VLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELVLFLC-SEAGSQVR 242
Query: 258 GQVLTIDGGMV 268
           G    +DGG +
Sbjct: 243 GAAWNVDGGWL 253

>pdb|3S55|A Chain A, Crystal Structure Of A Putative Short-Chain DehydrogenaseREDUCTASE From Mycobacterium Abscessus Bound To Nad Length = 281

Iteration: 1
 Score =  136 bits (342), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 92/270 (34%), Positives = 138/270 (51%), Gaps = 27/270 (10%)
Query: 23  NVEAPVAVVTGASRGIGRAVATSLGKAGCKV----------LVNYA-RSSKEAEEVCKEI 71
           + E   A++TG +RG+GR+ A +L +AG  +          +V Y   ++ +  E    +
Sbjct: 7   DFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALV 66
Query: 72  EASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDV 131
           E +G + ++   DV   A +ES +  A D  G +DI I NAGI+   LL  ++ +QW +V
Sbjct: 67  EKTGRRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEV 126
Query: 132 IDLNLTGVFLCTQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVA 191
           I  NLTG F               GRI+ ++S++G   N  QA+Y ++K GVIGLTK  A
Sbjct: 127 IGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQASYVSSKWGVIGLTKCAA 186
Query: 192 KEYASRNINVNAIAPGFIASDMTAK------LGEDLEKKILEKIP---------LGRYGQ 236
            +     I VNA+APG I + MT        +  DLEK  L+ +             + +
Sbjct: 187 HDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQYAPFLK 246
Query: 237 PEEVAGLVEFLALNPAAGYITGQVLTIDGG 266
           PEEV   V FL ++ A+ +ITG VL ID G
Sbjct: 247 PEEVTRAVLFL-VDEASSHITGTVLPIDAG 275

>pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE SDR FROM Mycobacterium Smegmatis Length = 262

Iteration: 1
 Score =  134 bits (338), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 83/242 (34%), Positives = 126/242 (52%), Gaps = 4/242 (1%)
Query: 30  VVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASG-GQALTFGGDVSKE 88
           VVTG ++GIGR +AT   +AG  V V   RS+ + +    +++  G G+ +    DVS  
Sbjct: 14  VVTGGTKGIGRGIATVFARAGANVAVA-GRSTADIDACVADLDQLGSGKVIGVQTDVSDR 72
Query: 89  ADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXXX 148
           A  +++   AV+ +G +D++  NAG+  D  L  M   Q   +  +N+ G F   Q    
Sbjct: 73  AQCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLD 132
Query: 149 XXXXXXXGRIINIASVVG-LVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
                  GR++  +S+ G + G  G ++Y A KA  +G  +T A E A   I VNAI PG
Sbjct: 133 ALIASGSGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPG 192
Query: 208 FIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM 267
            I ++   + GE+    +   IP G  G PE++  L  FLA    AGYITGQ + +DGG 
Sbjct: 193 NIMTEGLLENGEEYIASMARSIPAGALGTPEDIGHLAAFLATK-EAGYITGQAIAVDGGQ 251
Query: 268 VM 269
           V+
Sbjct: 252 VL 253

>pdb|4E3Z|A Chain A, Crystal Structure Of A Oxidoreductase From Rhizobium Etli Cfn 42 Length = 272

Iteration: 1
 Score =  134 bits (337), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 88/250 (35%), Positives = 136/250 (54%), Gaps = 11/250 (4%)
Query: 25  EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGD 84
           + PV +VTG SRGIG AV     + G +V VNYA + + A+ V   I  SGG+A+   GD
Sbjct: 25  DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGD 84
Query: 85  VSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDV---IDLNLTGVFL 141
           V   AD+ +        +G +D L+NNAGI       R+ +   + +   + +N+TG  L
Sbjct: 85  VGNAADIAAXFSAVDRQFGRLDGLVNNAGIV--DYPQRVDEXSVERIERXLRVNVTGSIL 142
Query: 142 CTQXXXXXXXXXXXGR---IINIASVVGLVGNIGQ-ANYSAAKAGVIGLTKTVAKEYASR 197
           C             G+   I+N++S   ++G+  Q  +Y+A+KA +   T  +A+E A+ 
Sbjct: 143 CAAEAVRRXSRLYSGQGGAIVNVSSXAAILGSATQYVDYAASKAAIDTFTIGLAREVAAE 202
Query: 198 NINVNAIAPGFIASDMTAKLG-EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYI 256
            I VNA+ PG I +D+ A  G  D  ++    +P  R G PEEVA  + +L L+P+A Y+
Sbjct: 203 GIRVNAVRPGIIETDLHASGGLPDRAREXAPSVPXQRAGXPEEVADAILYL-LSPSASYV 261
Query: 257 TGQVLTIDGG 266
           TG +L + GG
Sbjct: 262 TGSILNVSGG 271

>pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph Length = 279

Iteration: 1
 Score =  134 bits (336), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 94/252 (37%), Positives = 131/252 (51%), Gaps = 15/252 (5%)
Query: 29  AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKE 88
           A VTG S GIG AVA +L   G  V    AR +K        + A+G        DV+  
Sbjct: 27  AFVTGVSSGIGLAVARTLAARGIAVY-GCARDAKNVSAAVDGLRAAGHDVDGSSCDVTST 85
Query: 89  ADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXXX 148
            +V + +  AV+ +G + IL+N+AG         +  + W DV+D NLTGVF  T+    
Sbjct: 86  DEVHAAVAAAVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLR 145
Query: 149 XXXXXXXG--RIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
                  G  RI+NIAS  G  G +  A Y+A+K GV+G TK+V  E A   I VNA+ P
Sbjct: 146 AGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCP 205
Query: 207 GFIASDMTAKLGE-----------DLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGY 255
           G++ + M  ++ E           ++ ++   KIPLGRY  PEEVAGLV +L  + AA  
Sbjct: 206 GYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPEEVAGLVGYLVTDAAAS- 264
Query: 256 ITGQVLTIDGGM 267
           IT Q L + GG+
Sbjct: 265 ITAQALNVCGGL 276

>pdb|3Q6I|A Chain A, Crystal Structure Of Fabg4 And Coenzyme Binary Complex Length = 446

Iteration: 1
 Score =  133 bits (335), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 87/245 (35%), Positives = 135/245 (55%), Gaps = 6/245 (2%)
Query: 22  QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTF 81
           + ++  VA+VTGA+RGIG  +A    + G  V+     S+  AE + +     GG AL  
Sbjct: 201 KPLDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESA--AENLAETASKVGGTALWL 258
Query: 82  GGDVSKEADVESMIKTAVDAWG-TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVF 140
             DV+ +  V+ + +   D  G   DIL+NNAGITRD LL  M  ++W  V+ +NL    
Sbjct: 259 --DVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLAPL 316
Query: 141 LCTQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNIN 200
             T+           GR+I ++S+ G+ GN GQ NY+  KAG+IG+T+ +A   A++ I 
Sbjct: 317 RLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAKGIT 376
Query: 201 VNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQV 260
           +NA+APGFI + MTA +     +       L + GQP +VA  + + A +PA+  +TG V
Sbjct: 377 INAVAPGFIETQMTAAIPLATREVGRRLNSLLQGGQPVDVAEAIAYFA-SPASNAVTGNV 435
Query: 261 LTIDG 265
           + + G
Sbjct: 436 IRVCG 440

>pdb|4FW8|A Chain A, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh Length = 454

Iteration: 1
 Score =  133 bits (335), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 87/245 (35%), Positives = 135/245 (55%), Gaps = 6/245 (2%)
Query: 22  QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTF 81
           + ++  VA+VTGA+RGIG  +A    + G  V+     S+  AE + +     GG AL  
Sbjct: 209 KPLDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESA--AENLAETASKVGGTALWL 266
Query: 82  GGDVSKEADVESMIKTAVDAWG-TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVF 140
             DV+ +  V+ + +   D  G   DIL+NNAGITRD LL  M  ++W  V+ +NL    
Sbjct: 267 --DVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLAPL 324
Query: 141 LCTQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNIN 200
             T+           GR+I ++S+ G+ GN GQ NY+  KAG+IG+T+ +A   A++ I 
Sbjct: 325 RLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAKGIT 384
Query: 201 VNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQV 260
           +NA+APGFI + MTA +     +       L + GQP +VA  + + A +PA+  +TG V
Sbjct: 385 INAVAPGFIETQMTAAIPLATREVGRRLNSLLQGGQPVDVAEAIAYFA-SPASNAVTGNV 443
Query: 261 LTIDG 265
           + + G
Sbjct: 444 IRVCG 448

>pdb|3LLS|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Tuberculosis Length = 475

Iteration: 1
 Score =  133 bits (335), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 87/245 (35%), Positives = 135/245 (55%), Gaps = 6/245 (2%)
Query: 22  QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTF 81
           + ++  VA+VTGA+RGIG  +A    + G  V+     S+  AE + +     GG AL  
Sbjct: 230 KPLDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESA--AENLAETASKVGGTALWL 287
Query: 82  GGDVSKEADVESMIKTAVDAWG-TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVF 140
             DV+ +  V+ + +   D  G   DIL+NNAGITRD LL  M  ++W  V+ +NL    
Sbjct: 288 --DVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLAPL 345
Query: 141 LCTQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNIN 200
             T+           GR+I ++S+ G+ GN GQ NY+  KAG+IG+T+ +A   A++ I 
Sbjct: 346 RLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAKGIT 405
Query: 201 VNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQV 260
           +NA+APGFI + MTA +     +       L + GQP +VA  + + A +PA+  +TG V
Sbjct: 406 INAVAPGFIETQMTAAIPLATREVGRRLNSLLQGGQPVDVAEAIAYFA-SPASNAVTGNV 464
Query: 261 LTIDG 265
           + + G
Sbjct: 465 IRVCG 469

>pdb|3M1L|A Chain A, Crystal Strucutre Of A C-Terminal Trunacted Mutant Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 2.5 Angstrom Resolution Length = 432

Iteration: 1
 Score =  133 bits (335), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 87/245 (35%), Positives = 135/245 (55%), Gaps = 6/245 (2%)
Query: 22  QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTF 81
           + ++  VA+VTGA+RGIG  +A    + G  V+     S+  AE + +     GG AL  
Sbjct: 193 KPLDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESA--AENLAETASKVGGTALWL 250
Query: 82  GGDVSKEADVESMIKTAVDAWG-TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVF 140
             DV+ +  V+ + +   D  G   DIL+NNAGITRD LL  M  ++W  V+ +NL    
Sbjct: 251 --DVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLAPL 308
Query: 141 LCTQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNIN 200
             T+           GR+I ++S+ G+ GN GQ NY+  KAG+IG+T+ +A   A++ I 
Sbjct: 309 RLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAKGIT 368
Query: 201 VNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQV 260
           +NA+APGFI + MTA +     +       L + GQP +VA  + + A +PA+  +TG V
Sbjct: 369 INAVAPGFIETQMTAAIPLATREVGRRLNSLLQGGQPVDVAEAIAYFA-SPASNAVTGNV 427
Query: 261 LTIDG 265
           + + G
Sbjct: 428 IRVCG 432

>pdb|3V1T|C Chain C, Crystal Structure Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 1.9 Angstrom Resolution Length = 462

Iteration: 1
 Score =  133 bits (334), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 87/245 (35%), Positives = 135/245 (55%), Gaps = 6/245 (2%)
Query: 22  QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTF 81
           + ++  VA+VTGA+RGIG  +A    + G  V+     S+  AE + +     GG AL  
Sbjct: 217 KPLDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESA--AENLAETASKVGGTALWL 274
Query: 82  GGDVSKEADVESMIKTAVDAWG-TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVF 140
             DV+ +  V+ + +   D  G   DIL+NNAGITRD LL  M  ++W  V+ +NL    
Sbjct: 275 --DVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLAPL 332
Query: 141 LCTQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNIN 200
             T+           GR+I ++S+ G+ GN GQ NY+  KAG+IG+T+ +A   A++ I 
Sbjct: 333 RLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAKGIT 392
Query: 201 VNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQV 260
           +NA+APGFI + MTA +     +       L + GQP +VA  + + A +PA+  +TG V
Sbjct: 393 INAVAPGFIETQMTAAIPLATREVGRRLNSLLQGGQPVDVAEAIAYFA-SPASNAVTGNV 451
Query: 261 LTIDG 265
           + + G
Sbjct: 452 IRVCG 456

>pdb|3U0B|A Chain A, Crystal Structure Of An Oxidoreductase From Mycobacterium Smegmatis Length = 454

Iteration: 1
 Score =  132 bits (332), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/257 (36%), Positives = 136/257 (52%), Gaps = 30/257 (11%)
Query: 22  QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTF 81
           + ++  VAVVTGA+RGIG  +A    + G  V+      +  AE++ +  +  GG ALT 
Sbjct: 209 KPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGA--AEDLKRVADKVGGTALTL 266
Query: 82  GGDVSKEADVESMIKTAVDAWG-TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVF 140
             DV+ +  V+ +     +  G  VDIL+NNAGITRD LL  M + +W  VI +NL    
Sbjct: 267 --DVTADDAVDKITAHVTEHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQ 324
Query: 141 LCTQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNIN 200
             T+           GR+I ++S+ G+ GN GQ NY+  KAG+IGL + +A   A + I 
Sbjct: 325 RLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTKAGMIGLAEALAPVLADKGIT 384
Query: 201 VNAIAPGFIASDMTAKLGEDLEKKILEKIPL-----GRY-------GQPEEVAGLVEFLA 248
           +NA+APGFI            E K+ E IPL     GR        GQP +VA L+ + A
Sbjct: 385 INAVAPGFI------------ETKMTEAIPLATREVGRRLNSLFQGGQPVDVAELIAYFA 432
Query: 249 LNPAAGYITGQVLTIDG 265
            +PA+  +TG  + + G
Sbjct: 433 -SPASNAVTGNTIRVCG 448

>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex Length = 276

Iteration: 1
 Score =  132 bits (332), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/252 (36%), Positives = 132/252 (52%), Gaps = 16/252 (6%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGG-QALTFGGDVS 86
           +A+VTG SRGIG+ +A  L +AG +V +  AR ++   +    + A G  QA+    D+S
Sbjct: 31  IALVTGGSRGIGQMIAQGLLEAGARVFI-CARDAEACADTATRLSAYGDCQAIP--ADLS 87
Query: 87  KEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQX- 145
            EA    + +   +    +DIL+NNAG +    L     S W+ V+ LN+T VF C Q  
Sbjct: 88  SEAGARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQL 147
Query: 146 ---XXXXXXXXXXGRIINIASVVGLVGNIGQAN-YSAAKAGVIGLTKTVAKEYASRNINV 201
                         R+INI SV G+     QA  Y  +KA +  L++ +AKE    +INV
Sbjct: 148 LPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAKELVGEHINV 207
Query: 202 NAIAPGFIASDMTAKLGEDLEKKILE----KIPLGRYGQPEEVAGLVEFLALNPAAGYIT 257
           N IAPG   S MT  +  D   + LE     IP+GR+G+PEE+A L   LA   A  Y+T
Sbjct: 208 NVIAPGRFPSRMTRHIAND--PQALEADSASIPMGRWGRPEEMAALAISLA-GTAGAYMT 264
Query: 258 GQVLTIDGGMVM 269
           G V+ IDGG  +
Sbjct: 265 GNVIPIDGGFHL 276

>pdb|1YBV|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And An Active Site Inhibitor Length = 283

Iteration: 1
 Score =  130 bits (328), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 88/261 (33%), Positives = 138/261 (52%), Gaps = 17/261 (6%)
Query: 23  NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFG 82
           ++E  VA+VTGA RGIGR +A  LG+ GCKV+VNYA S++ AEEV   I+ +G  A    
Sbjct: 26  SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVK 85
Query: 83  GDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLC 142
            +V    D+  M + AV  +G +DI+ +N+G+     +  +   ++  V  +N  G F  
Sbjct: 86  ANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFV 145
Query: 143 TQXXXXXXXXXXXGRIINIASVVGLVGNIG-QANYSAAKAGVIGLTKTVAKEYASRNINV 201
            +           GR+I + S+ G    +   A YS +K  +    + +A + A + I V
Sbjct: 146 AR--EAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITV 203
Query: 202 NAIAPGFIASDMTAKL-------GEDLEKKILEKI------PLGRYGQPEEVAGLVEFLA 248
           N +APG I +DM   +       GE+L  + +++       PL R G P ++A +V FLA
Sbjct: 204 NVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCFLA 263
Query: 249 LNPAAGYITGQVLTIDGGMVM 269
            N   G++TG+V+ IDGG  M
Sbjct: 264 SND-GGWVTGKVIGIDGGACM 283

>pdb|1DOH|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And 4-nitro-inden-1-one Length = 283

Iteration: 1
 Score =  130 bits (328), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 88/261 (33%), Positives = 138/261 (52%), Gaps = 17/261 (6%)
Query: 23  NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFG 82
           ++E  VA+VTGA RGIGR +A  LG+ GCKV+VNYA S++ AEEV   I+ +G  A    
Sbjct: 26  SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVK 85
Query: 83  GDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLC 142
            +V    D+  M + AV  +G +DI+ +N+G+     +  +   ++  V  +N  G F  
Sbjct: 86  ANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFV 145
Query: 143 TQXXXXXXXXXXXGRIINIASVVGLVGNIG-QANYSAAKAGVIGLTKTVAKEYASRNINV 201
            +           GR+I + S+ G    +   A YS +K  +    + +A + A + I V
Sbjct: 146 AR--EAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITV 203
Query: 202 NAIAPGFIASDMTAKL-------GEDLEKKILEKI------PLGRYGQPEEVAGLVEFLA 248
           N +APG I +DM   +       GE+L  + +++       PL R G P ++A +V FLA
Sbjct: 204 NVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCFLA 263
Query: 249 LNPAAGYITGQVLTIDGGMVM 269
            N   G++TG+V+ IDGG  M
Sbjct: 264 SN-DGGWVTGKVIGIDGGACM 283

>pdb|3GAF|A Chain A, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid Dehydrogenase From Brucella Melitensis Length = 256

Iteration: 1
 Score =  130 bits (327), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 96/252 (38%), Positives = 145/252 (57%), Gaps = 6/252 (2%)
Query: 19  EAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQA 78
           E+  ++   VA+VTGA+ GIGRA+A +  KAG  V+V   +S + AE V   I  +GG+A
Sbjct: 5   ESPFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKS-EGAEAVAAAIRQAGGKA 63
Query: 79  LTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGIT-RDTLLMRMKKSQWQDVIDLNLT 137
           +    +V+ E   E++IK A+D +G + +L+NNAG        M M   +W     LNL 
Sbjct: 64  IGLECNVTDEQHREAVIKAALDQFGKITVLVNNAGGGGPKPFDMPMSDFEW--AFKLNLF 121
Query: 138 GVFLCTQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASR 197
            +F  +Q           G I+NI+S+ G   N+  A+Y ++KA V  LT+ +A +    
Sbjct: 122 SLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFDVGPM 181
Query: 198 NINVNAIAPGFIASDMTAK-LGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYI 256
            I VNAIAPG I +D  A  L  ++E+ +L+  PLGR G+ +++A    FL  +PAA +I
Sbjct: 182 GIRVNAIAPGAIKTDALATVLTPEIERAMLKHTPLGRLGEAQDIANAALFLC-SPAAAWI 240
Query: 257 TGQVLTIDGGMV 268
           +GQVLT+ GG V
Sbjct: 241 SGQVLTVSGGGV 252

>pdb|3OML|A Chain A, Structure Of Full-Length Peroxisomal Multifunctional Enzyme Type 2 From Drosophila Melanogaster Length = 613

Iteration: 1
 Score =  130 bits (326), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 85/202 (42%), Positives = 111/202 (54%), Gaps = 12/202 (5%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNY--------ARSSKEAEEVCKEIEASGGQAL 79
           VAVVTGA  G+GR  A    + G KV+VN           S + A+ V  EI  +GG+A+
Sbjct: 21  VAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAV 80
Query: 80  TFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGV 139
               D +   D   +I+TA+ A+G VDIL+NNAGI RD  L++  +  W  V D++L G 
Sbjct: 81  ---ADYNSVIDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGS 137
Query: 140 FLCTQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNI 199
           F CTQ           GRII  +S  G+ GN GQ NY+AAK G+IGL  TVA E A  N+
Sbjct: 138 FKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQVNYTAAKMGLIGLANTVAIEGARNNV 197
Query: 200 NVNAIAPGFIASDMTAKLGEDL 221
             N I P   AS MT  +  D+
Sbjct: 198 LCNVIVPT-AASRMTEGILPDI 218

>pdb|3VTZ|A Chain A, Structure Of Thermoplasma Volcanium Aldohexose Dehydrogenase Length = 269

Iteration: 1
 Score =  128 bits (322), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 93/252 (36%), Positives = 136/252 (53%), Gaps = 24/252 (9%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA+VTG S GIG AV  +L + G KV V+ +   K    V             F  DV+ 
Sbjct: 16  VAIVTGGSSGIGLAVVDALVRYGAKV-VSVSLDEKSDVNVSDH----------FKIDVTN 64
Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXX 147
           E +V+  ++     +G +DIL+NNAGI + + L       W+ +ID+N+ G +L  +   
Sbjct: 65  EEEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTI 124
Query: 148 XXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
                   G IINIASV         A Y  +K  ++GLT++VA +YA + I  NA+ PG
Sbjct: 125 PVMLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYAPK-IRCNAVCPG 183
Query: 208 FIASDMTAK-----LGED---LEKKILE---KIPLGRYGQPEEVAGLVEFLALNPAAGYI 256
            I + M  K     +GED   +E+KI E   + P+GR G+PEEVA +V FLA +  + +I
Sbjct: 184 TIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVAFLASD-RSSFI 242
Query: 257 TGQVLTIDGGMV 268
           TG  LT+DGG++
Sbjct: 243 TGACLTVDGGLL 254

>pdb|1GEG|A Chain A, Cryatal Structure Analysis Of Meso-2,3-Butanediol Dehydrogenase Length = 256

Iteration: 1
 Score =  128 bits (321), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 90/255 (35%), Positives = 134/255 (52%), Gaps = 16/255 (6%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGCKV-LVNYARSSKEAEEVCKEIEASGGQALTFGGDVS 86
           VA+VTGA +GIG+A+A  L K G  V + +Y  ++ +A  V  EI  +GG A+    DVS
Sbjct: 4   VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKA--VASEINQAGGHAVAVKVDVS 61
Query: 87  KEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXX 146
               V + ++ A    G  D+++NNAG+   T +  +       V ++N+ GV    Q  
Sbjct: 62  DRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAA 121
Query: 147 XXXXXXXXXG-RIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIA 205
                    G +IIN  S  G VGN   A YS++K  V GLT+T A++ A   I VN   
Sbjct: 122 VEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYC 181
Query: 206 PGFIASDMTAKLGEDLEK-----------KILEKIPLGRYGQPEEVAGLVEFLALNPAAG 254
           PG + + M A++   + +           +  ++I LGR  +PE+VA  V +LA +P + 
Sbjct: 182 PGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLA-SPDSD 240
Query: 255 YITGQVLTIDGGMVM 269
           Y+TGQ L IDGGMV 
Sbjct: 241 YMTGQSLLIDGGMVF 255

>pdb|1X1E|A Chain A, Crystal Structure Of Tt0495 Protein From Thermus Thermophilus Hb8 Length = 239

Iteration: 1
 Score =  128 bits (321), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 77/244 (31%), Positives = 133/244 (54%), Gaps = 15/244 (6%)
Query: 29  AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKE 88
           A+VTG SRGIGRA+A +L   G +V +    +S+  EE  + +      A+    D+ K+
Sbjct: 5   ALVTGGSRGIGRAIAEALVARGYRVAI----ASRNPEEAAQSL-----GAVPLPTDLEKD 55
Query: 89  ADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXXX 148
            D + ++K A++A G + +L++ A +      + +   +W+ V+ L+L   FL  Q    
Sbjct: 56  -DPKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAP 114
Query: 149 XXXXXXXGRIINIASVVGLV--GNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
                  GR++ I SV      G +    Y+ AK  ++GLT+ +AKE+A   I VN + P
Sbjct: 115 HMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCP 174
Query: 207 GFIASDMTAKLGE--DLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTID 264
           G++ ++ T  L +  +L + I  +IP+GR+ +PEE+A +   L  +  A Y+TGQ + +D
Sbjct: 175 GYVETEFTLPLRQNPELYEPITARIPMGRWARPEEIARVAAVLCGD-EAEYLTGQAVAVD 233
Query: 265 GGMV 268
           GG +
Sbjct: 234 GGFL 237

>pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase (Apo Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score =  127 bits (320), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 134/256 (52%), Gaps = 16/256 (6%)
Query: 24  VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGG 83
           ++  VA+VTG+ RGIG AVA  LG+ G KV+VNYA S+K+AE+V  EI+A G  A+    
Sbjct: 16  LDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKA 75
Query: 84  DVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCT 143
           D+ +  ++  +   AV  +G +DI ++N+G+     L  + + ++  V  LN  G F   
Sbjct: 76  DIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVA 135
Query: 144 QXXXXXXXXXXXGRIINIASVVGLVGNIGQAN-YSAAKAGVIGLTKTVAKEYASRNINVN 202
           +           GRI+  +S      ++ + + YS +K  V    +  +K+   + I VN
Sbjct: 136 R--EAYRHLTEGGRIVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRIFSKDCGDKKITVN 193
Query: 203 AIAPGFIASDM------------TAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALN 250
           A+APG   +DM            T+   E  ++      PL R G P++VA +V FL ++
Sbjct: 194 AVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVANVVGFL-VS 252
Query: 251 PAAGYITGQVLTIDGG 266
               ++ G+VLT+DGG
Sbjct: 253 KEGEWVNGKVLTLDGG 268

>pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase Length = 267

Iteration: 1
 Score =  127 bits (319), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 88/249 (35%), Positives = 127/249 (51%), Gaps = 11/249 (4%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGCKV-LVNYARSSKEAEEVCKEIEASGGQALTFGGDVS 86
           V ++TG   G+GRA A  L   G K+ LV+ +    EA +      A   + LT   DVS
Sbjct: 15  VVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVS 74
Query: 87  KEADVESMIKTAVDAWGTVDILINNAGIT-RDTLLMRMKKSQWQDVIDLNLTGVFLCTQX 145
            EA VE+ +    + +G +D   NNAGI  +         +++  V+ +NL GVFL  + 
Sbjct: 75  DEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEK 134
Query: 146 XXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIA 205
                     G ++N ASV G+ G   Q+ Y+AAK GV+GLT+  A EY    I +NAIA
Sbjct: 135 VLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIA 194
Query: 206 PGFIASDMT----AKLGEDLEKKILEKI----PLGRYGQPEEVAGLVEFLALNPAAGYIT 257
           PG I + M      +L  +  +K  E+     P  RYG+  E+A +V FL L+  A Y+ 
Sbjct: 195 PGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFL-LSDDASYVN 253
Query: 258 GQVLTIDGG 266
             V+ IDGG
Sbjct: 254 ATVVPIDGG 262

>pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate Dehydrogenase From Sinorhizobium Meliloti Length = 281

Iteration: 1
 Score =  127 bits (318), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 134/260 (51%), Gaps = 18/260 (6%)
Query: 22  QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEA-SGGQALT 80
           Q+     AV+TG++ GIG A+A +L KAG  +++N   +  E   V  E+   S G  L 
Sbjct: 21  QSXXTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLH 80
Query: 81  FGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVF 140
              D +K +++        D +G  DIL+NNAG+     +      QW  +I +NL+  F
Sbjct: 81  HPADXTKPSEIADXXAXVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSF 140
Query: 141 LCTQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNIN 200
              +           GRIINIAS  GLV +  ++ Y AAK G+ GLTKTVA E A   + 
Sbjct: 141 HTIRGAIPPXKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIXGLTKTVALEVAESGVT 200
Query: 201 VNAIAPGFIASDMTAKLGED-------LEKKILEKIPLGRYGQP-------EEVAGLVEF 246
           VN+I PG++ + +  K   D        E++++ ++ L   GQP       E+VA L  +
Sbjct: 201 VNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVXL--KGQPTKKFITVEQVASLALY 258
Query: 247 LALNPAAGYITGQVLTIDGG 266
           LA + AA  ITG  ++ DGG
Sbjct: 259 LAGDDAA-QITGTHVSXDGG 277

>pdb|4IQG|C Chain C, Crystal Structure Of Bpro0239 Oxidoreductase From Polaromonas Sp. Js666 In Nadp Bound Form Length = 271

Iteration: 1
 Score =  127 bits (318), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 88/251 (35%), Positives = 134/251 (53%), Gaps = 7/251 (2%)
Query: 22  QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTF 81
           Q+  + V ++TG SRGIG A A    + G  V VNYA +S  A+EV ++I  +GGQAL  
Sbjct: 21  QSXLSKVVLITGGSRGIGAASALLAARQGYAVAVNYASNSAAADEVVRQIREAGGQALAV 80
Query: 82  GGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMR-MKKSQWQDVIDLNLTGVF 140
             DV+KE +V +  +T     G +  L+NNAG+   T  +  +   + Q   ++N+ G F
Sbjct: 81  QADVAKEREVLAXFETVDAQLGRLSALVNNAGVVDQTTRVDGITLERLQRXFEINVFGSF 140
Query: 141 LCTQXXXXXXXXX---XXGRIINIASVVGLVGNIGQ-ANYSAAKAGVIGLTKTVAKEYAS 196
           LC +              G I+N++S    +G+ GQ  +Y+AAK  +   T  +AKE A+
Sbjct: 141 LCAREAVKRXSTRYGGSGGSIVNVSSAAARLGSPGQYVDYAAAKGAIDTFTLGLAKEVAT 200
Query: 197 RNINVNAIAPGFIASDMTAKLG-EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGY 255
             I VNA+ PG I +D+ A  G  +  + +  ++P  R G   EVA  + +L L   A Y
Sbjct: 201 EGIRVNAVRPGIIETDIHASGGLPNRARDVAPQVPXQRAGTAREVAEAIVWL-LGDQASY 259
Query: 256 ITGQVLTIDGG 266
            TG +L + GG
Sbjct: 260 TTGALLDVTGG 270

>pdb|1XQ1|A Chain A, X-Ray Structure Of Putative Tropinone Reducatse From Arabidopsis Thaliana Gene At1g07440 Length = 266

Iteration: 1
 Score =  127 bits (318), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 81/249 (32%), Positives = 128/249 (51%), Gaps = 4/249 (1%)
Query: 23  NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFG 82
           +++A   +VTG ++GIG A+       G  V+   AR+  E  E   + +  G Q     
Sbjct: 11  SLKAKTVLVTGGTKGIGHAIVEEFAGFG-AVIHTCARNEYELNECLSKWQKKGFQVTGSV 69
Query: 83  GDVSKEADVESMIKTAVDAWG-TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFL 141
            D S   + E +++T    +G  +DILINN G  R    +      +   I  NL   + 
Sbjct: 70  CDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYH 129
Query: 142 CTQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINV 201
            +Q           G II ++S+ G+V     + YSA K  +  L + +A E+AS  I  
Sbjct: 130 LSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIRA 189
Query: 202 NAIAPGFIASDMTAKLGED-LEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQV 260
           NA+AP  IA+ +   + +D  +K ++ + PLGR+G+PEEV+ LV FL + PAA YITGQ 
Sbjct: 190 NAVAPAVIATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAFLCM-PAASYITGQT 248
Query: 261 LTIDGGMVM 269
           + +DGG+ +
Sbjct: 249 ICVDGGLTV 257

>pdb|3AK4|A Chain A, Crystal Structure Of Nadh-Dependent Quinuclidinone Reductase From Agrobacterium Tumefaciens Length = 263

Iteration: 1
 Score =  127 bits (318), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 90/253 (35%), Positives = 136/253 (53%), Gaps = 17/253 (6%)
Query: 29  AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKE 88
           A+VTG S+GIG A+A +L KAG  V +        A+ V   +E +GG A+    DV+K 
Sbjct: 15  AIVTGGSKGIGAAIARALDKAGATVAI-ADLDVMAAQAVVAGLE-NGGFAVEV--DVTKR 70
Query: 89  ADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQ-XXX 147
           A V++ ++ A+DA G  D+L  NAG++     + +   +W    D+N  GVFL  Q    
Sbjct: 71  ASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACR 130
Query: 148 XXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
                   G I+N AS+   VG    A+YSA+K  V G T+ +A+E A +NI VN + PG
Sbjct: 131 HFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPG 190
Query: 208 FIASDMTAK-----------LGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYI 256
           F+ + M  +             E +  + +   PLGR  +PE+VA +V FLA + AA ++
Sbjct: 191 FVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVVVFLA-SDAARFM 249
Query: 257 TGQVLTIDGGMVM 269
           TGQ + + GG+ M
Sbjct: 250 TGQGINVTGGVRM 262

>pdb|3ITD|A Chain A, Crystal Structure Of An Inactive 17beta-Hydroxysteroid Dehydrogenase (Y167f Mutated Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score =  126 bits (316), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 134/256 (52%), Gaps = 16/256 (6%)
Query: 24  VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGG 83
           ++  VA+VTG+ RGIG AVA  LG+ G KV+VNYA S+K+AE+V  EI+A G  A+    
Sbjct: 16  LDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKA 75
Query: 84  DVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCT 143
           D+ +  ++  +   AV  +G +DI ++N+G+     L  + + ++  V  LN  G F   
Sbjct: 76  DIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVA 135
Query: 144 QXXXXXXXXXXXGRIINIASVVGLVGNIGQAN-YSAAKAGVIGLTKTVAKEYASRNINVN 202
           +           GRI+  +S      ++ + + +S +K  V    +  +K+   + I VN
Sbjct: 136 R--EAYRHLTEGGRIVLTSSNTSKDFSVPKHSLFSGSKGAVDSFVRIFSKDCGDKKITVN 193
Query: 203 AIAPGFIASDM------------TAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALN 250
           A+APG   +DM            T+   E  ++      PL R G P++VA +V FL ++
Sbjct: 194 AVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVANVVGFL-VS 252
Query: 251 PAAGYITGQVLTIDGG 266
               ++ G+VLT+DGG
Sbjct: 253 KEGEWVNGKVLTLDGG 268

>pdb|2D1Y|A Chain A, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8 Length = 256

Iteration: 1
 Score =  125 bits (315), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 89/244 (36%), Positives = 132/244 (54%), Gaps = 14/244 (5%)
Query: 30  VVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEA 89
           +VTG +RGIGRA+A +  + G   LV       E +EV    EA GG    F  D+  E 
Sbjct: 10  LVTGGARGIGRAIAQAFAREGA--LVALCDLRPEGKEVA---EAIGGA--FFQVDLEDER 62
Query: 90  DVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXXXX 149
           +    ++ A  A G VD+L+NNA I      + ++  +W+ V+++NLT     +      
Sbjct: 63  ERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAARE 122
Query: 150 XXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFI 209
                 G I+N+ASV GL      A Y+A+K G++ LT+++A + A   I VNA+APG I
Sbjct: 123 MRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAI 182
Query: 210 ASDMTAK---LGEDLE--KKILEKI-PLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTI 263
           A++   +   L  D E  ++  E +  L R G+PEEVA  V FLA +  A +ITG +L +
Sbjct: 183 ATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLA-SEKASFITGAILPV 241
Query: 264 DGGM 267
           DGGM
Sbjct: 242 DGGM 245

>pdb|4B79|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa High-throughput Crystallographic Studies For Assessment Of Potential Targets In Early Stage Drug Discovery. Length = 242

Iteration: 1
 Score =  125 bits (314), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 83/243 (34%), Positives = 129/243 (53%), Gaps = 21/243 (8%)
Query: 30  VVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEA 89
           +VTG S GIG A+A    + G             AE V   ++A G  A        +E 
Sbjct: 15  LVTGGSSGIGAAIAMQFAELG-------------AEVVALGLDADGVHAPRHPRIRREEL 61
Query: 90  DV--ESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXX 147
           D+     ++   +A   +D+L+NNAGI+RD        + ++ V+ LNL+   L +Q   
Sbjct: 62  DITDSQRLQRLFEALPRLDVLVNNAGISRDR--EEYDLATFERVLRLNLSAAMLASQLAR 119
Query: 148 XXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
                   G I+NIAS+    G+  +  YSA+K  ++ LT+++A EYA+  I VNAIAPG
Sbjct: 120 PLLAQRG-GSILNIASMYSTFGSADRPAYSASKGAIVQLTRSLACEYAAERIRVNAIAPG 178
Query: 208 FIASDMTAKLGEDLE--KKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDG 265
           +I + + A L  D+E  ++I+++ PL R+G+  EVA    FL   P A ++TG VL +DG
Sbjct: 179 WIDTPLGAGLKADVEATRRIMQRTPLARWGEAPEVASAAAFLC-GPGASFVTGAVLAVDG 237
Query: 266 GMV 268
           G +
Sbjct: 238 GYL 240

>pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score =  124 bits (312), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 87/242 (35%), Positives = 121/242 (50%), Gaps = 7/242 (2%)
Query: 29  AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKE 88
           A+VTGA++GIG+A+A  L   G  V+V    S   AE       + G +A     D+S  
Sbjct: 9   ALVTGAAQGIGKAIAARLAADGATVIV----SDINAEGAKAAAASIGKKARAIAADISDP 64
Query: 89  ADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXXX 148
             V+++        G +DIL+NNA I        +    W+ +ID+NLTG F+ T+    
Sbjct: 65  GSVKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTD 124
Query: 149 XXXXX-XXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
                   GR+I+IAS     G    A Y AAK GVIG T+ +A E    NI  NA+ PG
Sbjct: 125 QMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATELGKYNITANAVTPG 184
Query: 208 FIASDMTAKLGEDLEKKILEKI-PLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGG 266
            I SD       +     +E +  +   GQPE +A +V FLA + A  +ITGQ L +D G
Sbjct: 185 LIESDGVKASPHNEAFGFVEMLQAMKGKGQPEHIADVVSFLASDDAR-WITGQTLNVDAG 243
Query: 267 MV 268
           MV
Sbjct: 244 MV 245

>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253

Iteration: 1
 Score =  124 bits (312), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 82/254 (32%), Positives = 135/254 (53%), Gaps = 11/254 (4%)
Query: 21  AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALT 80
           +   E  V +VTG+  GIG+A A +L + G  V+V    +++ AE V K+I A GG A++
Sbjct: 4   SMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADI-NAEAAEAVAKQIVADGGTAIS 62
Query: 81  FGGDVSKEADVESMIKTAVDAWGTVDILINNAGI---TRDTLLMRMKKSQWQDVIDLNLT 137
              DVS     ++M    +  +G +D L+NNA I    +   L+ +    ++  + +NL 
Sbjct: 63  VAVDVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLD 122
Query: 138 GVFLCTQXXXXXXXXXXXGRIINIASVVG-LVGNIGQANYSAAKAGVIGLTKTVAKEYAS 196
           G   CT+           G I+N +S    L  N     Y  AK G+ GLT+ +++E   
Sbjct: 123 GALWCTRAVYKKMTKRGGGAIVNQSSTAAWLYSNY----YGLAKVGINGLTQQLSRELGG 178
Query: 197 RNINVNAIAPGFIASDMT-AKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGY 255
           RNI +NAIAPG I ++       +++   I++ +PL R G P+++ G+  FL L+  A +
Sbjct: 179 RNIRINAIAPGPIDTEANRTTTPKEMVDDIVKGLPLSRMGTPDDLVGMCLFL-LSDEASW 237
Query: 256 ITGQVLTIDGGMVM 269
           ITGQ+  +DGG ++
Sbjct: 238 ITGQIFNVDGGQII 251

>pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR FAMILY) MEMBER 4 (Dhrs4) Length = 261

Iteration: 1
 Score =  124 bits (310), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 81/245 (33%), Positives = 133/245 (54%), Gaps = 11/245 (4%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGG---D 84
           VA+VT ++ GIG A+A  L + G  V+V    SS++ + V + +    G+ L+  G    
Sbjct: 17  VALVTASTDGIGFAIARRLAQDGAHVVV----SSRKQQNVDQAVATLQGEGLSVTGTVCH 72
Query: 85  VSKEADVESMIKTAVDAWGTVDILINNAGITRDT-LLMRMKKSQWQDVIDLNLTGVFLCT 143
           V K  D E ++ TAV   G +DIL++NA +      +M + +  W   +D+N+    L T
Sbjct: 73  VGKAEDRERLVATAVKLHGGIDILVSNAAVNPFFGSIMDVTEEVWDKTLDINVKAPALMT 132
Query: 144 QXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNA 203
           +           G ++ ++S+     + G + Y+ +K  ++GLTKT+A E A RNI VN 
Sbjct: 133 KAVVPEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAIELAPRNIRVNC 192
Query: 204 IAPGFIASDMTAKLGEDLEKK--ILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL 261
           +APG I +  +  L  D EK+  + E + + R G+PE+ AG+V FL  +  A YITG+ +
Sbjct: 193 LAPGLIKTSFSRMLWMDKEKEESMKETLRIRRLGEPEDCAGIVSFLC-SEDASYITGETV 251
Query: 262 TIDGG 266
            + GG
Sbjct: 252 VVGGG 256

>pdb|1ZBQ|A Chain A, Crystal Structure Of Human 17-beta-hydroxysteroid Dehydrogenase Type 4 In Complex With Nad Length = 327

Iteration: 1
 Score =  123 bits (309), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/229 (36%), Positives = 122/229 (53%), Gaps = 23/229 (10%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVN--------YARSSKEAEEVCKEIEASGGQAL 79
           V +VTGA  G+GRA A +  + G  V+VN          + S  A++V +EI   GG+A+
Sbjct: 32  VVLVTGAGAGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSLAADKVVEEIRRRGGKAV 91
Query: 80  TFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGV 139
               +     + E ++KTA+DA+G +D+++NNAGI RD    R+    W  +  ++L G 
Sbjct: 92  A---NYDSVEEGEKVVKTALDAFGRIDVVVNNAGILRDRSFARISDEDWDIIHRVHLRGS 148
Query: 140 FLCTQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNI 199
           F  T+           GRII  +S  G+ GN GQANYSAAK G++GL  ++A E    NI
Sbjct: 149 FQVTRAAWEHMKKQKYGRIIMTSSASGIYGNFGQANYSAAKLGLLGLANSLAIEGRKSNI 208
Query: 200 NVNAIAPGFIASDMTAK-LGEDLEKKILEKIPLGRYGQPEEVAGLVEFL 247
           + N IAP    S MT   + EDL + +          +PE VA LV +L
Sbjct: 209 HCNTIAPN-AGSRMTQTVMPEDLVEAL----------KPEYVAPLVLWL 246

>pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And (S)- Hydroxypropylethane Thiosulfonate Dehydrogenases Length = 250

Iteration: 1
 Score =  123 bits (309), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 87/244 (35%), Positives = 130/244 (53%), Gaps = 8/244 (3%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCK-EIEASGGQALTFGGDVS 86
           VA+VTGAS G G A+AT     G +V      S++  EE  +    A   + L    DV+
Sbjct: 4   VAIVTGASSGNGLAIATRFLARGDRV-AALDLSAETLEETARTHWHAYADKVLRVRADVA 62
Query: 87  KEADVESMIKTAVDAWGTVDILINNAGITRDT---LLMRMKKSQWQDVIDLNLTGVFLCT 143
            E DV + I   ++ +G +D+L+NNAGIT ++   +L      Q+  V+ +N+ G+FL  
Sbjct: 63  DEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGC 122
Query: 144 QXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNA 203
           +           G I+NIASV  LV   G++ Y+ +K  V+ LTK+VA +YA   I  NA
Sbjct: 123 RAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNA 182
Query: 204 IAPGFIASDMTA-KLGE-DLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL 261
           + PG I + MT  +L + +L  ++L +IP    G   +VA  V FLA    A Y+ G  L
Sbjct: 183 VCPGMIETPMTQWRLDQPELRDQVLARIPQKEIGTAAQVADAVMFLA-GEDATYVNGAAL 241
Query: 262 TIDG 265
            +DG
Sbjct: 242 VMDG 245

>pdb|3QLJ|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Avium Length = 322

Iteration: 1
 Score =  123 bits (308), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 90/267 (33%), Positives = 134/267 (50%), Gaps = 34/267 (12%)
Query: 24  VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVN---------YARSSKEAEEVCKEIEAS 74
           V+  V +VTGA  GIGRA A +    G +V+VN          A     A+ V  EI A+
Sbjct: 25  VDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAA 84
Query: 75  GGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDL 134
           GG+A+  G +V+       +I+TAV+ +G +D+L+NNAGI RD ++    + ++  VI +
Sbjct: 85  GGEAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAV 144
Query: 135 NLTGVFLCTQXXX------XXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTK 188
           +L G F   +                 GRIIN +S  GL G++GQ NYSAAKAG+  LT 
Sbjct: 145 HLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQGNYSAAKAGIATLTL 204
Query: 189 TVAKEYASRNINVNAIAPG-------FIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVA 241
             A E     + VNAIAP         + ++M A   +D +              PE V+
Sbjct: 205 VGAAEMGRYGVTVNAIAPSARTRMTETVFAEMMATQDQDFDAM-----------APENVS 253
Query: 242 GLVEFLALNPAAGYITGQVLTIDGGMV 268
            LV +L  +  A  +TG+V  ++GG +
Sbjct: 254 PLVVWLG-SAEARDVTGKVFEVEGGKI 279

>pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score =  122 bits (305), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 87/242 (35%), Positives = 121/242 (50%), Gaps = 7/242 (2%)
Query: 29  AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKE 88
           A+VTGA++GIG+A+A  L   G  V+V    S   AE       + G +A     D+S  
Sbjct: 9   ALVTGAAQGIGKAIAARLAADGATVIV----SDINAEGAKAAAASIGKKARAIAADISDP 64
Query: 89  ADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXXX 148
             V+++        G +DIL+NNA I        +    W+ +ID+NLTG F+ T+    
Sbjct: 65  GSVKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTD 124
Query: 149 XXXXX-XXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
                   GR+I+IAS     G    A Y AAK GVIG T+ +A E    NI  NA+ PG
Sbjct: 125 QXRAAGKAGRVISIASNTFFAGTPNXAAYVAAKGGVIGFTRALATELGKYNITANAVTPG 184
Query: 208 FIASDMTAKLGEDLEKKILEKIPLGR-YGQPEEVAGLVEFLALNPAAGYITGQVLTIDGG 266
            I SD       +     +E +   +  GQPE +A +V FLA + A  +ITGQ L +D G
Sbjct: 185 LIESDGVKASPHNEAFGFVEXLQAXKGKGQPEHIADVVSFLASDDAR-WITGQTLNVDAG 243
Query: 267 MV 268
            V
Sbjct: 244 XV 245

>pdb|1GZ6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat Peroxisomal Multifunctional Enzyme Type 2 Length = 319

Iteration: 1
 Score =  122 bits (305), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 85/228 (37%), Positives = 119/228 (52%), Gaps = 21/228 (9%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVN--------YARSSKEAEEVCKEIEASGGQAL 79
           V +VTGA  G+GRA A +  + G  V+VN          + S  A++V +EI   GG+A+
Sbjct: 11  VVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAV 70
Query: 80  TFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGV 139
                V  EA  E ++KTA+D +G +D+++NNAGI RD    R+    W  +  ++L G 
Sbjct: 71  ANYDSV--EAG-EKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGS 127
Query: 140 FLCTQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNI 199
           F  T+           GRII  AS  G+ GN GQANYSAAK G++GL  T+  E    NI
Sbjct: 128 FQVTRAAWDHXKKQNYGRIIXTASASGIYGNFGQANYSAAKLGLLGLANTLVIEGRKNNI 187
Query: 200 NVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFL 247
           + N IAP   +        EDL + +          +PE VA LV +L
Sbjct: 188 HCNTIAPNAGSRXTETVXPEDLVEAL----------KPEYVAPLVLWL 225

>pdb|2WDZ|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter Sphaeroides In Complex With Nad+ And 1,2-Pentandiol Length = 254

Iteration: 1
 Score =  121 bits (304), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 133/248 (53%), Gaps = 9/248 (3%)
Query: 23  NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFG 82
            ++   A VTGA  GIG  +  +   +G + L+   R +   +   +E+ A+    +   
Sbjct: 8   RLDGACAAVTGAGSGIGLEICRAFAASGAR-LILIDREAAALDRAAQELGAAVAARIV-- 64
Query: 83  GDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLC 142
            DV+    + +    A      V IL+N+AGI R    +    + W+ V+ +N+ G+F  
Sbjct: 65  ADVTDAEAMTAAAAEAEAV-APVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWA 123
Query: 143 TQXXXXXXXXXXXGRIINIASVVGLVGNIGQ--ANYSAAKAGVIGLTKTVAKEYASRNIN 200
           ++           G I+N+ S+ G + N  Q  ++Y A+K  V  LT+ +A E+A R + 
Sbjct: 124 SRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAAEWAGRGVR 183
Query: 201 VNAIAPGFIASDMTAKLGE--DLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITG 258
           VNA+APG++A++MT K+ E  +L +  L+  P+GR G+P E+A    FLA +PAA Y+TG
Sbjct: 184 VNALAPGYVATEMTLKMRERPELFETWLDMTPMGRCGEPSEIAAAALFLA-SPAASYVTG 242
Query: 259 QVLTIDGG 266
            +L +DGG
Sbjct: 243 AILAVDGG 250

>pdb|3IMF|A Chain A, 1.99 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' Length = 257

Iteration: 1
 Score =  121 bits (303), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 90/247 (36%), Positives = 127/247 (51%), Gaps = 7/247 (2%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           V ++TG S G G+  AT   K G +V++   R+ ++ EE   EIE   GQ LT   DV  
Sbjct: 8   VVIITGGSSGXGKGXATRFAKEGARVVIT-GRTKEKLEEAKLEIEQFPGQILTVQXDVRN 66
Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXX- 146
             D++  I+   + +G +DILINNA          +  + W  VI++ L G F C+Q   
Sbjct: 67  TDDIQKXIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIG 126
Query: 147 XXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASR-NINVNAIA 205
                    G IIN  +        G  + +AAKAGV+  TKT+A E+  +  I VNAIA
Sbjct: 127 KYWIEKGIKGNIINXVATYAWDAGPGVIHSAAAKAGVLAXTKTLAVEWGRKYGIRVNAIA 186
Query: 206 PGFIASDMTAK---LGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLT 262
           PG I     A    + E+  K+ ++ +PLGR G PEE+AGL  +L  + AA YI G   T
Sbjct: 187 PGPIERTGGADKLWISEEXAKRTIQSVPLGRLGTPEEIAGLAYYLCSDEAA-YINGTCXT 245
Query: 263 IDGGMVM 269
            DGG  +
Sbjct: 246 XDGGQHL 252

>pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa Reductase Length = 303

Iteration: 1
 Score =  121 bits (303), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 80/253 (31%), Positives = 133/253 (52%), Gaps = 14/253 (5%)
Query: 24  VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS-----GGQA 78
           ++  VA+VTG + GIG+A+   L + G  V++  +R  +  +    E++A+       + 
Sbjct: 16  LQGQVAIVTGGATGIGKAIVKELLELGSNVVIA-SRKLERLKSAADELQANLPPTKQARV 74
Query: 79  LTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTG 138
           +    ++  E +V +++K+ +D +G ++ L+NN G    +    +    W  V++ NLTG
Sbjct: 75  IPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTG 134
Query: 139 VFLCTQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYS-AAKAGVIGLTKTVAKEYASR 197
            F   +           G I+NI  +V        A +S AA+AGV  LTK++A E+A  
Sbjct: 135 TFYMCKAVYSSWMKEHGGSIVNI--IVPTKAGFPLAVHSGAARAGVYNLTKSLALEWACS 192
Query: 198 NINVNAIAPGFIASDMTAK----LGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAA 253
            I +N +APG I S    +     G+   +   +KIP  R G PEEV+ +V FL L+PAA
Sbjct: 193 GIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFL-LSPAA 251
Query: 254 GYITGQVLTIDGG 266
            +ITGQ + +DGG
Sbjct: 252 SFITGQSVDVDGG 264

>pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis At 1.87 A Resolution Length = 255

Iteration: 1
 Score =  120 bits (302), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 83/258 (32%), Positives = 125/258 (48%), Gaps = 11/258 (4%)
Query: 20  AAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQAL 79
           A   ++  VA+VTGASRGIGRA+A  L   G  V ++Y    +EAEE   EI+++GG A 
Sbjct: 1   ANSXLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAF 60
Query: 80  TFGGDVSKEADVESMIKTAVDAWGT------VDILINNAGITRDTLLMRMKKSQWQDVID 133
           + G ++     VE++  +  +           DILINNAGI     +    +  +   + 
Sbjct: 61  SIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRXVS 120
Query: 134 LNLTGVFLCTQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKE 193
           +N    F   Q            RIINI+S    +       YS  K  +   T T+AK+
Sbjct: 121 VNAKAPFFIIQQALSRLRDNS--RIINISSAATRISLPDFIAYSXTKGAINTXTFTLAKQ 178
Query: 194 YASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKI--PLGRYGQPEEVAGLVEFLALNP 251
             +R I VNAI PGF+ +D  A+L  D   K          R G+ E++A    FLA +P
Sbjct: 179 LGARGITVNAILPGFVKTDXNAELLSDPXXKQYATTISAFNRLGEVEDIADTAAFLA-SP 237
Query: 252 AAGYITGQVLTIDGGMVM 269
            + ++TGQ++ + GG  +
Sbjct: 238 DSRWVTGQLIDVSGGSCL 255

>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1 Length = 249

Iteration: 1
 Score =  120 bits (302), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 83/253 (32%), Positives = 125/253 (49%), Gaps = 14/253 (5%)
Query: 22  QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTF 81
           Q ++  +AV+TG + GIGRA+A      G  + +     + EAE   + +   G + LT 
Sbjct: 3   QRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNL---GRRVLTV 59
Query: 82  GGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFL 141
             DVS+  DVE+  K  +  +G  DIL+NNAGI        +   QW+   ++N+   FL
Sbjct: 60  KCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFL 119
Query: 142 CTQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINV 201
             +           GRIIN+ S    +      +Y + KA  IG T+ +A +     I V
Sbjct: 120 MAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGITV 179
Query: 202 NAIAPGFI------ASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGY 255
           NAIAP  +      AS ++A    D+   +L+ IP  R   P ++ G   FLA + A+ +
Sbjct: 180 NAIAPSLVRTATTEASALSAMF--DVLPNMLQAIP--RLQVPLDLTGAAAFLASDDAS-F 234
Query: 256 ITGQVLTIDGGMV 268
           ITGQ L +DGGMV
Sbjct: 235 ITGQTLAVDGGMV 247

>pdb|1U7T|A Chain A, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR Length = 261

Iteration: 1
 Score =  120 bits (301), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 134/264 (50%), Gaps = 22/264 (8%)
Query: 20  AAQNVEAPVAVVTGASRGIGRAVATSL-GKAGCKVLVNYARSSKEAEEVCKEIEASGGQA 78
           A ++V+  VAV+TG + G+G A A  L G+    VL++   S  EA+   K++   G   
Sbjct: 4   ACRSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQ--AKKL---GNNC 58
Query: 79  LTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQ------WQDVI 132
           +    DV+ E DV++ +  A   +G VD+ +N AGI   +    +KK Q      +Q V+
Sbjct: 59  VFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVL 118
Query: 133 DLNLTGVFLCTQXXXXXXXXX------XXGRIINIASVVGLVGNIGQANYSAAKAGVIGL 186
           D+NL G F   +                 G IIN ASV    G +GQA YSA+K G++G+
Sbjct: 119 DVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGM 178
Query: 187 TKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPL-GRYGQPEEVAGLVE 245
           T  +A++ A   I V  IAPG   + +   L E +   +  ++P   R G P E A LV+
Sbjct: 179 TLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVRNFLASQVPFPSRLGDPAEYAHLVQ 238
Query: 246 FLALNPAAGYITGQVLTIDGGMVM 269
            +  NP   ++ G+V+ +DG + M
Sbjct: 239 AIIENP---FLNGEVIRLDGAIRM 259

>pdb|1NFF|A Chain A, Crystal Structure Of Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score =  120 bits (301), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 82/241 (34%), Positives = 128/241 (53%), Gaps = 10/241 (4%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA+V+G +RG+G +   ++   G KV+  +     E  +      A   + +    DV++
Sbjct: 9   VALVSGGARGMGASHVRAMVAEGAKVV--FGDILDEEGKAMAAELADAARYVHL--DVTQ 64
Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXX 147
            A  ++ + TAV A+G + +L+NNAGI     +     ++WQ ++D+NLTGVFL  +   
Sbjct: 65  PAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVV 124
Query: 148 XXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
                   G IINI+S+ GL G +    Y+A K  V GLTK+ A E     I VN+I PG
Sbjct: 125 KPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPG 184
Query: 208 FIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM 267
            + + MT  + ED+ +       LGR  +P EV+ LV +LA + ++ Y TG    +DGG 
Sbjct: 185 LVKTPMTDWVPEDIFQT-----ALGRAAEPVEVSNLVVYLASDESS-YSTGAEFVVDGGT 238
Query: 268 V 268
           V
Sbjct: 239 V 239

>pdb|3A28|C Chain C, Crystal Structure Of L-2,3-Butanediol Dehydrogenase Length = 258

Iteration: 1
 Score =  119 bits (299), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 88/254 (34%), Positives = 136/254 (53%), Gaps = 14/254 (5%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLV-NYARSSKEAEEVCKEIEASGGQALTFGGDVS 86
           VA+VTG ++GIGR ++  L   G  + V +  +  ++A E  K IEA+  +A+  G DV+
Sbjct: 4   VAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVT 63
Query: 87  KEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXX 146
            +A+ +S I  A +  G  D+L+NNAGI +   L+ + +   + +  +N+  VF   Q  
Sbjct: 64  DKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAA 123
Query: 147 XXXXXXX-XXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIA 205
                     G+IIN AS+  + G    + YS  K  V GLT+  A+E A +   VNA A
Sbjct: 124 SRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYA 183
Query: 206 PGFIASDMTAKLGEDLE-----------KKILEKIPLGRYGQPEEVAGLVEFLALNPAAG 254
           PG + + M  ++  +L            K+    I LGR   PE+VAGLV FLA +  + 
Sbjct: 184 PGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLVSFLA-SENSN 242
Query: 255 YITGQVLTIDGGMV 268
           Y+TGQV+ +DGGM+
Sbjct: 243 YVTGQVMLVDGGML 256

>pdb|3AWD|A Chain A, Crystal Structure Of Gox2181 Length = 260

Iteration: 1
 Score =  119 bits (299), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/249 (33%), Positives = 135/249 (54%), Gaps = 15/249 (6%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLV---NYARSSKEAEEVCKEIEASGGQALTFGGD 84
           VA+VTG ++ IG A  T+L +AG +V++   + A ++K  E++  E    G    +   D
Sbjct: 15  VAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRME----GHDVSSVVMD 70
Query: 85  VSKEADVESMIKTAVDAWGTVDILINNAGIT-RDTLLMRMKKSQWQDVIDLNLTGVFLCT 143
           V+    V++ +++  +  G VDIL+  AGI   +     M   QW   +D+NL G+F   
Sbjct: 71  VTNTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSC 130
Query: 144 QXXXXXXXXXXXGRIINIASVVGLVGNIGQ--ANYSAAKAGVIGLTKTVAKEYASRNINV 201
           Q           G I+ I S+ GL+ N  Q  A Y+A+KAGV    +++A E+A   I  
Sbjct: 131 QAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAEWAPHGIRA 190
Query: 202 NAIAPGFIASDMTAKLG---EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITG 258
           NA+AP +I + +T + G    +L    +   P+GR GQP+EVA +V+FLA + AA  +TG
Sbjct: 191 NAVAPTYIETTLT-RFGMEKPELYDAWIAGTPMGRVGQPDEVASVVQFLA-SDAASLMTG 248
Query: 259 QVLTIDGGM 267
            ++ +D G 
Sbjct: 249 AIVNVDAGF 257

>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh And 7-Oxo Glycochenodeoxycholic Acid Length = 255

Iteration: 1
 Score =  119 bits (299), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/246 (32%), Positives = 134/246 (54%), Gaps = 4/246 (1%)
Query: 24  VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGG 83
           ++   A++TGA  GIG+ +A +   AG  V+V+   ++  A  V  EI+  GGQA     
Sbjct: 9   LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDI-NADAANHVVDEIQQLGGQAFACRC 67
Query: 84  DVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCT 143
           D++ E ++ ++   A+   G VDIL+NNAG         M  + ++   +LN+   F  +
Sbjct: 68  DITSEQELSALADFAISKLGKVDILVNNAG-GGGPKPFDMPMADFRRAYELNVFSFFHLS 126
Query: 144 QXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNA 203
           Q           G I+ I S+     NI   +Y+++KA    L + +A +   +NI VN 
Sbjct: 127 QLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNG 186
Query: 204 IAPGFIASD-MTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLT 262
           IAPG I +D + + +  ++E+K+L+  P+ R GQP+++A    FL  +PAA +++GQ+LT
Sbjct: 187 IAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLC-SPAASWVSGQILT 245
Query: 263 IDGGMV 268
           + GG V
Sbjct: 246 VSGGGV 251

>pdb|2O23|A Chain A, The Structure Of Wild-Type Human Hadh2 (17beta-Hydroxysteroid Dehydrogenase Type 10) Bound To Nad+ At 1.2 A Length = 265

Iteration: 1
 Score =  119 bits (298), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 134/264 (50%), Gaps = 22/264 (8%)
Query: 20  AAQNVEAPVAVVTGASRGIGRAVATSL-GKAGCKVLVNYARSSKEAEEVCKEIEASGGQA 78
           A ++V+  VAV+TG + G+G A A  L G+    VL++   S  EA+   K++   G   
Sbjct: 6   ACRSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQ--AKKL---GNNC 60
Query: 79  LTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQ------WQDVI 132
           +    DV+ E DV++ +  A   +G VD+ +N AGI   +    +KK Q      +Q V+
Sbjct: 61  VFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVL 120
Query: 133 DLNLTGVFLCTQXXXXXXXXX------XXGRIINIASVVGLVGNIGQANYSAAKAGVIGL 186
           D+NL G F   +                 G IIN ASV    G +GQA YSA+K G++G+
Sbjct: 121 DVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGM 180
Query: 187 TKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPL-GRYGQPEEVAGLVE 245
           T  +A++ A   I V  IAPG   + +   L E +   +  ++P   R G P E A LV+
Sbjct: 181 TLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFPSRLGDPAEYAHLVQ 240
Query: 246 FLALNPAAGYITGQVLTIDGGMVM 269
            +  NP   ++ G+V+ +DG + M
Sbjct: 241 AIIENP---FLNGEVIRLDGAIRM 261

>pdb|1SO8|A Chain A, Abeta-bound Human Abad Structure [also Known As 3-hydroxyacyl-coa Dehydrogenase Type Ii (type Ii Hadh), Endoplasmic Reticulum- Associated Amyloid Beta-peptide Binding Protein (erab)] Length = 261

Iteration: 1
 Score =  119 bits (298), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 134/264 (50%), Gaps = 22/264 (8%)
Query: 20  AAQNVEAPVAVVTGASRGIGRAVATSL-GKAGCKVLVNYARSSKEAEEVCKEIEASGGQA 78
           A ++V+  VAV+TG + G+G A A  L G+    VL++   S  EA+   K++   G   
Sbjct: 4   ACRSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQ--AKKL---GNNC 58
Query: 79  LTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQ------WQDVI 132
           +    DV+ E DV++ +  A   +G VD+ +N AGI   +    +KK Q      +Q V+
Sbjct: 59  VFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVL 118
Query: 133 DLNLTGVFLCTQXXXXXXXXX------XXGRIINIASVVGLVGNIGQANYSAAKAGVIGL 186
           D+NL G F   +                 G IIN ASV    G +GQA YSA+K G++G+
Sbjct: 119 DVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGM 178
Query: 187 TKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPL-GRYGQPEEVAGLVE 245
           T  +A++ A   I V  IAPG   + +   L E +   +  ++P   R G P E A LV+
Sbjct: 179 TLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFPSRLGDPAEYAHLVQ 238
Query: 246 FLALNPAAGYITGQVLTIDGGMVM 269
            +  NP   ++ G+V+ +DG + M
Sbjct: 239 AIIENP---FLNGEVIRLDGAIRM 259

>pdb|3OIC|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From B. Subtilis (Apo Form) Length = 258

Iteration: 1
 Score =  119 bits (297), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 78/246 (31%), Positives = 133/246 (54%), Gaps = 15/246 (6%)
Query: 29  AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKE 88
           A+VTG+SRG+G+A A  L + G  +++NYARS K A E  +EIE  G + L    +V + 
Sbjct: 7   ALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQP 66
Query: 89  ADVESMIKTAVDAWGTVDILINNA--GITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXX 146
           A ++ M +   + +G +D+ +NNA  G+ R   +M ++++ W   +++N   +  C Q  
Sbjct: 67  AKIKEMFQQIDETFGRLDVFVNNAASGVLRP--VMELEETHWDWTMNINAKALLFCAQEA 124
Query: 147 XXXXXXXXXGRIINIASVVGLVGNIGQ-ANYSA---AKAGVIGLTKTVAKEYASRNINVN 202
                    G I++I+S    +G+I    NY+    +KA +  LT+ +A E + + I VN
Sbjct: 125 AKLMEKNGGGHIVSISS----LGSIRYLENYTTVGVSKAALEALTRYLAVELSPKQIIVN 180
Query: 203 AIAPGFIASDMTAKLG--EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQV 260
           A++ G I +D        EDL +   +  P GR  + +++   VEFL ++  A  I GQ 
Sbjct: 181 AVSGGAIDTDALKHFPNREDLLEDARQNTPAGRMVEIKDMVDTVEFL-VSSKADMIRGQT 239
Query: 261 LTIDGG 266
           + +DGG
Sbjct: 240 IIVDGG 245

>pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From Sulfolobus Acidocaldarius Length = 254

Iteration: 1
 Score =  118 bits (295), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 131/251 (52%), Gaps = 7/251 (2%)
Query: 22  QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTF 81
           Q+++  V +VTGA  GIGRA+A         ++V          ++ +E+   G + L  
Sbjct: 3   QSLKNKVVIVTGAGSGIGRAIAKKFA-LNDSIVVAVELLEDRLNQIVQELRGMGKEVLGV 61
Query: 82  GGDVSKEADVESMIKTAVDAWGTVDILINNAGITRD-TLLMRMKKSQWQDVIDLNLTGVF 140
             DVSK+ DVE  ++   + +  +D+L NNAGI    T +  +    W+ V+ +NL   F
Sbjct: 62  KADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAF 121
Query: 141 LCTQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNIN 200
             ++           G I+N AS+ G+ G    A Y+ AK G+IGLT+++A  Y  + I 
Sbjct: 122 YSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIR 181
Query: 201 VNAIAPGFIASDM---TAKLGEDLEKKILEKIPL-GRYGQPEEVAGLVEFLALNPAAGYI 256
             A+ PG + +++   ++K  E   + + + + L  R  +PE++A ++ FLA + A+ ++
Sbjct: 182 AVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVIVFLASDEAS-FV 240
Query: 257 TGQVLTIDGGM 267
            G  + +DGG+
Sbjct: 241 NGDAVVVDGGL 251

>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Thermoresistibile Length = 317

Iteration: 1
 Score =  117 bits (294), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 139/275 (50%), Gaps = 34/275 (12%)
Query: 24  VEAPVAVVTGASRGIGRAVATSLGKAGCKVL----------VNYAR-SSKEAEEVCKEIE 72
           ++  VA +TGA+RG GR  A  L + G  ++          ++YA+ S +E +E  + +E
Sbjct: 44  LQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVE 103
Query: 73  ASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVI 132
             G + +    DV   A +++++  A+  +G +DIL++N GI+    ++ +   QW D++
Sbjct: 104 EQGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDIL 163
Query: 133 DLNLTGVFL-CTQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVA 191
             NL G +  C             G +I ++S VGL G  GQ++Y+A+K GV GL  ++A
Sbjct: 164 QTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASKHGVQGLMLSLA 223
Query: 192 KEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEK------------------IPLGR 233
            E    NI VN++ PG + ++M   L E L K  L                    +P+  
Sbjct: 224 NEVGRHNIRVNSVNPGAVNTEMA--LNEKLLKMFLPHLENPTREDAAELFSQLTLLPIP- 280
Query: 234 YGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMV 268
           + +PE+V+  V +LA + A  YI G  + +DGG +
Sbjct: 281 WVEPEDVSNAVAWLASDEAR-YIHGAAIPVDGGQL 314

>pdb|3CTM|A Chain A, Crystal Structure Of A Carbonyl Reductase From Candida Parapsilosis With Anti-Prelog Stereo-Specificity Length = 279

Iteration: 1
 Score =  117 bits (292), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/246 (32%), Positives = 129/246 (52%), Gaps = 9/246 (3%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGG-QALTFGGDVS 86
           VA VTG+S GIG AVA +  +AG  V + Y  +S  A+E  + ++ + G  +  +  ++S
Sbjct: 36  VASVTGSSGGIGWAVAEAYAQAGADVAIWY--NSHPADEKAEHLQKTYGVHSKAYKCNIS 93
Query: 87  KEADVESMIKTAVDAWGTVDILINNAGIT--RDTLLMRMKKSQWQDVIDLNLTGVFLCTQ 144
               VE  I      +GT+D+ + NAG+T  +   +       W  +I ++L GV+ C+ 
Sbjct: 94  DPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSH 153
Query: 145 XXXXXXXXXXXGRIINIASVVGLVGNIGQ--ANYSAAKAGVIGLTKTVAKEYASRNINVN 202
                      G +I  +S+ G + NI Q  A Y+ AKA    L K++A E+A     VN
Sbjct: 154 NIGKIFKKNGKGSLIITSSISGKIVNIPQLQAPYNTAKAACTHLAKSLAIEWAPF-ARVN 212
Query: 203 AIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLT 262
            I+PG+I +D+T    +D++ K  +  PLGR G  +E+ G   +LA N A+ + TG  + 
Sbjct: 213 TISPGYIDTDITDFASKDMKAKWWQLTPLGREGLTQELVGGYLYLASN-ASTFTTGSDVV 271
Query: 263 IDGGMV 268
           IDGG  
Sbjct: 272 IDGGYT 277

>pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph Length = 259

Iteration: 1
 Score =  116 bits (291), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 74/252 (29%), Positives = 128/252 (50%), Gaps = 8/252 (3%)
Query: 23  NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFG 82
           N+E   A+VTG SRGIG  +   L   G  V    +R+ KE  +   +  + G +     
Sbjct: 5   NLEGCTALVTGGSRGIGYGIVEELASLGASVYTC-SRNQKELNDCLTQWRSKGFKVEASV 63
Query: 83  GDVSKEADVESMIKTAVDAW-GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFL 141
            D+S  ++ + ++ T  + + G ++IL+NNAGI             +  ++ +N    + 
Sbjct: 64  CDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYH 123
Query: 142 CTQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINV 201
            +            G ++ I+SV G +    +A Y A K  +  LT+ +A E+A  NI V
Sbjct: 124 LSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRV 183
Query: 202 NAIAPGFIASDMTAKLGEDLEK-----KILEKIPLGRYGQPEEVAGLVEFLALNPAAGYI 256
           N + PG IA+ +     +D E+     K++++  L R G+P+E+A +V FL   PAA Y+
Sbjct: 184 NGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCF-PAASYV 242
Query: 257 TGQVLTIDGGMV 268
           TGQ++ +DGG++
Sbjct: 243 TGQIIYVDGGLM 254

>pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And Pseudotropine Length = 260

Iteration: 1
 Score =  116 bits (291), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 74/252 (29%), Positives = 128/252 (50%), Gaps = 8/252 (3%)
Query: 23  NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFG 82
           N+E   A+VTG SRGIG  +   L   G  V    +R+ KE  +   +  + G +     
Sbjct: 6   NLEGCTALVTGGSRGIGYGIVEELASLGASVYTC-SRNQKELNDCLTQWRSKGFKVEASV 64
Query: 83  GDVSKEADVESMIKTAVDAW-GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFL 141
            D+S  ++ + ++ T  + + G ++IL+NNAGI             +  ++ +N    + 
Sbjct: 65  CDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYH 124
Query: 142 CTQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINV 201
            +            G ++ I+SV G +    +A Y A K  +  LT+ +A E+A  NI V
Sbjct: 125 LSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRV 184
Query: 202 NAIAPGFIASDMTAKLGEDLEK-----KILEKIPLGRYGQPEEVAGLVEFLALNPAAGYI 256
           N + PG IA+ +     +D E+     K++++  L R G+P+E+A +V FL   PAA Y+
Sbjct: 185 NGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCF-PAASYV 243
Query: 257 TGQVLTIDGGMV 268
           TGQ++ +DGG++
Sbjct: 244 TGQIIYVDGGLM 255

>pdb|1E6W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And Estradiol Length = 260

Iteration: 1
 Score =  116 bits (291), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 83/264 (31%), Positives = 135/264 (51%), Gaps = 22/264 (8%)
Query: 20  AAQNVEAPVAVVTGASRGIGRAVATSL-GKAGCKVLVNYARSSKEAEEVCKEIEASGGQA 78
           A ++V+  VAV+TG + G+G + A  L G+    VL++   S  E E   K++   GG  
Sbjct: 3   AVRSVKGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGETE--AKKL---GGNC 57
Query: 79  LTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQ------WQDVI 132
           +    +V+ E +V++ +  A + +G +D+ +N AGI         KK+Q      +Q VI
Sbjct: 58  IFAPANVTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVI 117
Query: 133 DLNLTGVFLCTQXXXXXXXXX------XXGRIINIASVVGLVGNIGQANYSAAKAGVIGL 186
           ++NL G F   +                 G IIN ASV    G +GQA YSA+K G++G+
Sbjct: 118 NVNLIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGM 177
Query: 187 TKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPL-GRYGQPEEVAGLVE 245
           T  +A++ A   I V  IAPG  A+ +   L + +   +  ++P   R G P E A LV+
Sbjct: 178 TLPIARDLAPIGIRVVTIAPGLFATPLLTTLPDKVRNFLASQVPFPSRLGDPAEYAHLVQ 237
Query: 246 FLALNPAAGYITGQVLTIDGGMVM 269
            +  NP   ++ G+V+ +DG + M
Sbjct: 238 MVIENP---FLNGEVIRLDGAIRM 258

>pdb|1E3S|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh Length = 261

Iteration: 1
 Score =  116 bits (291), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 83/264 (31%), Positives = 135/264 (51%), Gaps = 22/264 (8%)
Query: 20  AAQNVEAPVAVVTGASRGIGRAVATSL-GKAGCKVLVNYARSSKEAEEVCKEIEASGGQA 78
           A ++V+  VAV+TG + G+G + A  L G+    VL++   S  E E   K++   GG  
Sbjct: 4   AVRSVKGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGETE--AKKL---GGNC 58
Query: 79  LTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQ------WQDVI 132
           +    +V+ E +V++ +  A + +G +D+ +N AGI         KK+Q      +Q VI
Sbjct: 59  IFAPANVTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVI 118
Query: 133 DLNLTGVFLCTQXXXXXXXXX------XXGRIINIASVVGLVGNIGQANYSAAKAGVIGL 186
           ++NL G F   +                 G IIN ASV    G +GQA YSA+K G++G+
Sbjct: 119 NVNLIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGM 178
Query: 187 TKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPL-GRYGQPEEVAGLVE 245
           T  +A++ A   I V  IAPG  A+ +   L + +   +  ++P   R G P E A LV+
Sbjct: 179 TLPIARDLAPIGIRVVTIAPGLFATPLLTTLPDKVRNFLASQVPFPSRLGDPAEYAHLVQ 238
Query: 246 FLALNPAAGYITGQVLTIDGGMVM 269
            +  NP   ++ G+V+ +DG + M
Sbjct: 239 MVIENP---FLNGEVIRLDGAIRM 259

>pdb|1E3W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And 3-Keto Butyrate Length = 261

Iteration: 1
 Score =  116 bits (290), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 83/264 (31%), Positives = 135/264 (51%), Gaps = 22/264 (8%)
Query: 20  AAQNVEAPVAVVTGASRGIGRAVATSL-GKAGCKVLVNYARSSKEAEEVCKEIEASGGQA 78
           A ++V+  VAV+TG + G+G + A  L G+    VL++   S  E E   K++   GG  
Sbjct: 4   AVRSVKGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGETE--AKKL---GGNC 58
Query: 79  LTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQ------WQDVI 132
           +    +V+ E +V++ +  A + +G +D+ +N AGI         KK+Q      +Q VI
Sbjct: 59  IFAPANVTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVI 118
Query: 133 DLNLTGVFLCTQXXXXXXXXX------XXGRIINIASVVGLVGNIGQANYSAAKAGVIGL 186
           ++NL G F   +                 G IIN ASV    G +GQA YSA+K G++G+
Sbjct: 119 NVNLIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGM 178
Query: 187 TKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPL-GRYGQPEEVAGLVE 245
           T  +A++ A   I V  IAPG  A+ +   L + +   +  ++P   R G P E A LV+
Sbjct: 179 TLPIARDLAPIGIRVVTIAPGLFATPLLTTLPDTVRNFLASQVPFPSRLGDPAEYAHLVQ 238
Query: 246 FLALNPAAGYITGQVLTIDGGMVM 269
            +  NP   ++ G+V+ +DG + M
Sbjct: 239 MVIENP---FLNGEVIRLDGAIRM 259

>pdb|1NFR|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score =  115 bits (289), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 70/185 (37%), Positives = 104/185 (56%), Gaps = 6/185 (3%)
Query: 84  DVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCT 143
           DV++ A  ++ + TAV A+G + +L+NNAGI     +     ++WQ ++D+NLTGVFL  
Sbjct: 61  DVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGI 120
Query: 144 QXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNA 203
           +           G IINI+S+ GL G +    Y+A K  V GLTK+ A E     I VN+
Sbjct: 121 RAVVKPXKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNS 180
Query: 204 IAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTI 263
           I PG + +  T  + ED+ +       LGR  +P EV+ LV +LA + ++ Y TG    +
Sbjct: 181 IHPGLVKTPXTDWVPEDIFQT-----ALGRAAEPVEVSNLVVYLASDESS-YSTGAEFVV 234
Query: 264 DGGMV 268
           DGG V
Sbjct: 235 DGGTV 239

>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273

Iteration: 1
 Score =  115 bits (289), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/267 (29%), Positives = 135/267 (50%), Gaps = 17/267 (6%)
Query: 12  TIEQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEI 71
           ++    NE   +++   A+VTG S+GIG A+   L   G +V    +R+ KE +E C EI
Sbjct: 7   SMMNCNNEGRWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYT-CSRNEKELDE-CLEI 64
Query: 72  EASGGQALTFGG---DVSKEADVESMIKTAVDAW-GTVDILINNAGITRDTLLMRMKKSQ 127
               G  L   G   D+    + + +++T    + G ++IL+NNAG+          +  
Sbjct: 65  WREKG--LNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKD 122
Query: 128 WQDVIDLNLTGVFLCTQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLT 187
           +  ++  N    +  +Q           G +I ++S+ G       + YSA+K  +  +T
Sbjct: 123 YNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMT 182
Query: 188 KTVAKEYASRNINVNAIAPGFIASDM-------TAKLGEDLEKKILEKIPLGRYGQPEEV 240
           K++A E+A  NI VN++APG I + +            E+++  I+ K P+GR G+P+EV
Sbjct: 183 KSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIV-KTPMGRAGKPQEV 241
Query: 241 AGLVEFLALNPAAGYITGQVLTIDGGM 267
           + L+ FL   PAA YITGQ++  DGG 
Sbjct: 242 SALIAFLCF-PAASYITGQIIWADGGF 267

>pdb|2DTD|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (aldt) In Ligand-free Form Length = 264

Iteration: 1
 Score =  115 bits (289), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 84/251 (33%), Positives = 126/251 (50%), Gaps = 25/251 (9%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           V +VTGAS GIGRA+A      G KV+        EA+     IE           DV+ 
Sbjct: 10  VVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGEAKY--DHIEC----------DVTN 57
Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXX 147
              V++ I      +G++ +L+NNAGI     +  M   +W+ +ID+NL G +  ++   
Sbjct: 58  PDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAI 117
Query: 148 XXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
                     I+NI+SV   +     + Y  +K  VIGLTK++A +YA   +  NA+ P 
Sbjct: 118 PYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAPL-LRCNAVCPA 176
Query: 208 FIASDMTAK-----LGED---LEKKILE---KIPLGRYGQPEEVAGLVEFLALNPAAGYI 256
            I + +  K     +G D   +EKKI E   + P+ R G+P+EVA  V FLA +  A +I
Sbjct: 177 TIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFLA-SREASFI 235
Query: 257 TGQVLTIDGGM 267
           TG  L +DGG+
Sbjct: 236 TGTCLYVDGGL 246

>pdb|2A4K|A Chain A, 3-Oxoacyl-[acyl Carrier Protein] Reductase From Thermus Thermophilus Tt0137 Length = 263

Iteration: 1
 Score =  115 bits (288), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 84/237 (35%), Positives = 122/237 (51%), Gaps = 8/237 (3%)
Query: 30  VVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEA 89
           +VTGA+ GIGRA      + G   LV   R  +   E    +EA     +    DVS   
Sbjct: 10  LVTGAASGIGRAALDLFAREGAS-LVAVDREERLLAEAVAALEAEAIAVVA---DVSDPK 65
Query: 90  DVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXXXX 149
            VE++   A++ +G +  + + AG+    L   +    W+ V+ +NLTG FL  +     
Sbjct: 66  AVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEV 125
Query: 150 XXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFI 209
                 G ++   SV GL G  G A+Y+A K GV+GL +T+A E A + + VN + PG I
Sbjct: 126 LEEG--GSLVLTGSVAGL-GAFGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLI 182
Query: 210 ASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGG 266
            + MTA L     ++ +   PLGR G+PEEVA    FL L+  + YITGQ L +DGG
Sbjct: 183 QTPMTAGLPPWAWEQEVGASPLGRAGRPEEVAQAALFL-LSEESAYITGQALYVDGG 238

>pdb|2ZK7|A Chain A, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (Aldt) Length = 257

Iteration: 1
 Score =  115 bits (288), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 84/251 (33%), Positives = 126/251 (50%), Gaps = 25/251 (9%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           V +VTGAS GIGRA+A      G KV+        EA+     IE           DV+ 
Sbjct: 17  VVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGEAKY--DHIEC----------DVTN 64
Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXX 147
              V++ I      +G++ +L+NNAGI     +  M   +W+ +ID+NL G +  ++   
Sbjct: 65  PDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAI 124
Query: 148 XXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
                     I+NI+SV   +     + Y  +K  VIGLTK++A +YA   +  NA+ P 
Sbjct: 125 PYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAPL-LRCNAVCPA 183
Query: 208 FIASDMTAK-----LGED---LEKKILE---KIPLGRYGQPEEVAGLVEFLALNPAAGYI 256
            I + +  K     +G D   +EKKI E   + P+ R G+P+EVA  V FLA +  A +I
Sbjct: 184 TIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFLA-SREASFI 242
Query: 257 TGQVLTIDGGM 267
           TG  L +DGG+
Sbjct: 243 TGTCLYVDGGL 253

>pdb|2HSD|A Chain A, The Refined Three-Dimensional Structure Of 3alpha,20beta- Hydroxysteroid Dehydrogenase And Possible Roles Of The Residues Conserved In Short-Chain Dehydrogenases Length = 253

Iteration: 1
 Score =  115 bits (287), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 80/245 (32%), Positives = 130/245 (53%), Gaps = 5/245 (2%)
Query: 22  QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTF 81
            ++     ++TG +RG+G   A     AG +V++      + A    +  +A+  Q L  
Sbjct: 1   NDLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHL-- 58
Query: 82  GGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFL 141
             DV+ E D + ++  A + +G+VD L+NNAGI+    L      +++ V+++NLTGVF+
Sbjct: 59  --DVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFI 116
Query: 142 CTQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINV 201
             +           G I+NI+S  GL+G    ++Y A+K GV GL+K  A E  +  I V
Sbjct: 117 GMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRV 176
Query: 202 NAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL 261
           N++ PG   + MTA+ G    +      P+GR G+P E+AG V  L L+  + Y+TG  L
Sbjct: 177 NSVHPGMTYTPMTAETGIRQGEGNYPNTPMGRVGEPGEIAGAVVKL-LSDTSSYVTGAEL 235
Query: 262 TIDGG 266
            +DGG
Sbjct: 236 AVDGG 240

>pdb|3GDF|A Chain A, Crystal Structure Of The Nadp-Dependent Mannitol Dehydrogenase From Cladosporium Herbarum. Length = 267

Iteration: 1
 Score =  115 bits (287), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 78/250 (31%), Positives = 131/250 (52%), Gaps = 9/250 (3%)
Query: 23  NVEAPVAVVTGAS--RGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGG-QAL 79
           +++  V VVTGAS  +G+G   A    + G  V + YA  ++ AEE  KE+E + G +A 
Sbjct: 17  SLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAK 76
Query: 80  TFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGV 139
            +   V      E ++K  V  +G +D  I NAG T D+ ++      W  V+ ++L G 
Sbjct: 77  AYKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGT 136
Query: 140 FLCTQXXXXXXXXXXXGRIINIASVVGLVGNIG--QANYSAAKAGVIGLTKTVAKEYASR 197
           F C +           G ++  AS+ G + N    Q +Y+ AKAG I + +++A E+  R
Sbjct: 137 FHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTSYNVAKAGCIHMARSLANEW--R 194
Query: 198 NI-NVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYI 256
           +   VN+I+PG+I + ++  + ++ ++     IP+GR G  +E+ G   + A + A+ Y 
Sbjct: 195 DFARVNSISPGYIDTGLSDFVPKETQQLWHSMIPMGRDGLAKELKGAYVYFA-SDASTYT 253
Query: 257 TGQVLTIDGG 266
           TG  L IDGG
Sbjct: 254 TGADLLIDGG 263

>pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase Length = 260

Iteration: 1
 Score =  113 bits (283), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 80/254 (31%), Positives = 131/254 (51%), Gaps = 11/254 (4%)
Query: 19  EAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQA 78
           E  + +E  VA+VT ++ GIG A+A  L + G  V+V    SS++ E V + +    G+ 
Sbjct: 7   ERRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVV----SSRKQENVDRTVATLQGEG 62
Query: 79  LTFGG---DVSKEADVESMIKTAVDAWGTVDILINNAGITRDT-LLMRMKKSQWQDVIDL 134
           L+  G    V K  D E ++  AV+  G VDIL++NA +      ++   +  W  ++ +
Sbjct: 63  LSVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHV 122
Query: 135 NLTGVFLCTQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEY 194
           N+    L T+           G ++ ++SV           Y+ +K  ++GLTK +A E 
Sbjct: 123 NVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVEL 182
Query: 195 ASRNINVNAIAPGFIASDMTAKLGEDLEKK--ILEKIPLGRYGQPEEVAGLVEFLALNPA 252
           A RNI VN +APG I ++ +  L  D  +K  + E + + R G PE+ AG+V FL  +  
Sbjct: 183 APRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLC-SED 241
Query: 253 AGYITGQVLTIDGG 266
           A YITG+ + + GG
Sbjct: 242 ASYITGETVVVGGG 255

>pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R. Sphaeroides Length = 256

Iteration: 1
 Score =  112 bits (281), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 129/261 (49%), Gaps = 23/261 (8%)
Query: 24  VEAPVAVVTGASRGIGRAVATSLGKAGCKVLV---NYARSSKEAEEVCKEIEASGGQALT 80
           ++   A++TG++RGIGRA A +  + G +V +   N   +   A E+       G  A  
Sbjct: 3   LDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI-------GPAACA 55
Query: 81  FGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTG-V 139
              DV+ +A ++  +   +D WG++DIL+NNA +     ++ + +  +  +  +N++G +
Sbjct: 56  IALDVTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTL 115
Query: 140 FLCTQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNI 199
           F+              G+IIN+AS  G  G      Y A KA VI LT++         I
Sbjct: 116 FMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGI 175
Query: 200 NVNAIAPGFIASD----MTAKLGE-------DLEKKILEKIPLGRYGQPEEVAGLVEFLA 248
           NVNAIAPG +  +    + AK  +       + ++++   +P GR G+ E++ G+  FLA
Sbjct: 176 NVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIFLA 235
Query: 249 LNPAAGYITGQVLTIDGGMVM 269
             P A YI  Q   +DGG  M
Sbjct: 236 -TPEADYIVAQTYNVDGGNWM 255

>pdb|3EDM|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Agrobacterium Tumefaciens Length = 259

Iteration: 1
 Score =  111 bits (277), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 83/244 (34%), Positives = 127/244 (52%), Gaps = 9/244 (3%)
Query: 30  VVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEA 89
           VV GA R IGRA A    + G  V++ Y  +++ A     EIE  G  AL    D++  A
Sbjct: 12  VVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAA 71
Query: 90  DVESMIKTAVDAWGTVDILINNAG--ITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXX 147
           +VE+ I  A D +G +  L++ AG  I R T +  M ++ W  V+D+NLT +FL  +   
Sbjct: 72  EVEAAISAAADKFGEIHGLVHVAGGLIARKT-IAEMDEAFWHQVLDVNLTSLFLTAK--T 128
Query: 148 XXXXXXXXGRIINIASVVGLV-GNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
                   G I+  +S  G   G  G   Y+ +K  V+  T+ +AKE   + I VNA+ P
Sbjct: 129 ALPKMAKGGAIVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGLAKEVGPK-IRVNAVCP 187
Query: 207 GFIASDMTAKLGE-DLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDG 265
           G I++       + ++ +++     L R G  E+VAGLV FLA + AA Y+TG    I+G
Sbjct: 188 GMISTTFHDTFTKPEVRERVAGATSLKREGSSEDVAGLVAFLASDDAA-YVTGACYDING 246
Query: 266 GMVM 269
           G++ 
Sbjct: 247 GVLF 250

>pdb|3GVC|A Chain A, Crystal Structure Of Probable Short-Chain Dehydrogenase- Reductase From Mycobacterium Tuberculosis Length = 277

Iteration: 1
 Score =  111 bits (277), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 84/254 (33%), Positives = 118/254 (46%), Gaps = 14/254 (5%)
Query: 23  NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFG 82
           ++   VA+VTGA  GIG AVA  L   GC VL              K     G  A    
Sbjct: 26  DLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATK----IGCGAAACR 81
Query: 83  GDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLC 142
            DVS E  + +M+   V A+G VD L+ NAG+     L+      +  VI +NL G +LC
Sbjct: 82  VDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLC 141
Query: 143 TQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
           T+           G I+N++S+ G V   G   Y  +KAG+I L++  A E  S  I  N
Sbjct: 142 TKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELRSSGIRSN 201
Query: 203 AIAPGFIASDMT--------AKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAG 254
            + P F+ + M           LG    + ++ ++  GR   PEE+AG+V FL L+  A 
Sbjct: 202 TLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQ-GRMAAPEEMAGIVVFL-LSDDAS 259
Query: 255 YITGQVLTIDGGMV 268
            ITG     DGG +
Sbjct: 260 MITGTTQIADGGTI 273

>pdb|1HDC|A Chain A, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid Dehydrogenase By A Licorice-Derived Steroidal Inhibitor Length = 254

Iteration: 1
 Score =  110 bits (275), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 130/246 (52%), Gaps = 6/246 (2%)
Query: 22  QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTF 81
            ++     ++TG +RG+G   A     AG +V++      + A    +  +A+  Q L  
Sbjct: 1   NDLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHL-- 58
Query: 82  GGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFL 141
             DV+ E D + ++  A + +G+VD L+NNAGI+    L      +++ V+++NLTGVF+
Sbjct: 59  --DVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFI 116
Query: 142 CTQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINV 201
             +           G I+NI+S  GL+G    ++Y A+K GV GL+K  A E  +  I V
Sbjct: 117 GMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRV 176
Query: 202 NAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYG-QPEEVAGLVEFLALNPAAGYITGQV 260
           N++ PG   + MTA+ G    +      P+GR G +P E+AG V  L L+  + Y+TG  
Sbjct: 177 NSVHPGMTYTPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKL-LSDTSSYVTGAE 235
Query: 261 LTIDGG 266
           L +DGG
Sbjct: 236 LAVDGG 241

>pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278

Iteration: 1
 Score =  110 bits (274), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 80/256 (31%), Positives = 126/256 (49%), Gaps = 19/256 (7%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGG---D 84
           VA++TG+S GIGRA A    + G KV +   R ++  EE  ++I A+G           D
Sbjct: 8   VAIITGSSNGIGRATAVLFAREGAKVTIT-GRHAERLEETRQQILAAGVSEQNVNSVVAD 66
Query: 85  VSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQ----WQDVIDLNLTGVF 140
           V+ +A  + ++ T +  +G +DIL+NNAG        +   +Q    +   ++LNL  V 
Sbjct: 67  VTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVI 126
Query: 141 LCTQXXXXXXXXXXXGRIINIASVV-GLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNI 199
             T+           G I+NI+S+  GL        YS AKA +   T+  A +     I
Sbjct: 127 ALTKKAVPHLSSTK-GEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQHGI 185
Query: 200 NVNAIAPGFIASDMTAKLG--EDLEKKIL-------EKIPLGRYGQPEEVAGLVEFLALN 250
            VN+I+PG +A+   + +G  E+  KK         E +P G  GQP+++A ++ FLA  
Sbjct: 186 RVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAFLADR 245
Query: 251 PAAGYITGQVLTIDGG 266
             + YI G  L +DGG
Sbjct: 246 KTSSYIIGHQLVVDGG 261

>pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Rhizobium Etli Cfn 42 Length = 277

Iteration: 1
 Score =  110 bits (274), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 82/249 (32%), Positives = 115/249 (46%), Gaps = 19/249 (7%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           V +VTG   GIGRA A    K G  V+V    +   A  V  EI   G +A     DVS 
Sbjct: 29  VCIVTGGGSGIGRATAELFAKNGAYVVVADV-NEDAAVRVANEI---GSKAFGVRVDVSS 84
Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXX 147
             D ES ++     WG VD+L+NNAG      ++ + +  W  +  +N+ G+FLC++   
Sbjct: 85  AKDAESXVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIXSVNVKGIFLCSKYVI 144
Query: 148 XXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
                   G IIN  S         +  Y A+K  +  LT+  A ++A   I VNA+APG
Sbjct: 145 PVXRRNGGGSIINTTSYTATSAIADRTAYVASKGAISSLTRAXAXDHAKEGIRVNAVAPG 204
Query: 208 FIASDM----------TAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYIT 257
            I S             AKL  D   + +      R G  EE+A    FLA + +  + T
Sbjct: 205 TIDSPYFTKIFAEAKDPAKLRSDFNARAVXD----RXGTAEEIAEAXLFLASDRSR-FAT 259
Query: 258 GQVLTIDGG 266
           G +LT+DGG
Sbjct: 260 GSILTVDGG 268

>pdb|3TOX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase In Complex With Nad(P) From Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score =  110 bits (274), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/253 (35%), Positives = 130/253 (51%), Gaps = 12/253 (4%)
Query: 22  QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTF 81
             +E  +A+VTGAS GIGRA A    + G KV+V  AR+     E+  EI   GG+A   
Sbjct: 4   SRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVT-ARNGNALAELTDEIAGGGGEAAAL 62
Query: 82  GGDVSKEADVESMIKTAVDAWGTVDILINNAG-ITRDTLLMRMKKSQWQDVIDLNLTGVF 140
            GDV  EA  E++++ AV  +G +D   NNAG +     +  +    W++ +D NLT  F
Sbjct: 63  AGDVGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAF 122
Query: 141 LCTQXXXXXXXXXXXGRIINIASVVG-LVGNIGQANYSAAKAGVIGLTKTVAKEYASRNI 199
           L  +           G +   +S VG   G  G A Y+A+KAG+IGL + +A E  +R I
Sbjct: 123 LAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELGARGI 182
Query: 200 NVNAIAPGFIASDMTAKL----GEDLEKK-ILEKI-PLGRYGQPEEVAGLVEFLALNPAA 253
            VNA+ PG   +D  A      G   E +  +E +  L R  +PEE+A    +LA +  A
Sbjct: 183 RVNALLPG--GTDTPANFANLPGAAPETRGFVEGLHALKRIARPEEIAEAALYLA-SDGA 239
Query: 254 GYITGQVLTIDGG 266
            ++TG  L  DGG
Sbjct: 240 SFVTGAALLADGG 252

>pdb|3I3O|A Chain A, 2.06 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad-acetone Length = 291

Iteration: 1
 Score =  108 bits (270), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 132/264 (50%), Gaps = 9/264 (3%)
Query: 10  VATIEQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCK 69
           +   E    + ++ ++    ++TG   GIGRAV+ +  K G  + + Y     +A E  +
Sbjct: 31  LPQFEDPNYKGSEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQ 90
Query: 70  EIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINN-AGITRDTLLMRMKKSQW 128
            +E  G + +   GD+S E   + +++  V   G+++IL+NN A       L  +   Q 
Sbjct: 91  YVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQL 150
Query: 129 QDVIDLNLTGVFLCTQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTK 188
           +    +N+   F  T+             IIN AS+V   GN    +YSA K  ++  T+
Sbjct: 151 EKTFRINIFSYFHVTKAALSHLKQGDV--IINTASIVAYEGNETLIDYSATKGAIVAFTR 208
Query: 189 TVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILE---KIPLGRYGQPEEVAGLVE 245
           ++++    + I VN +APG I + +     +  EKK+ +    +P+ R GQP E+A    
Sbjct: 209 SLSQSLVQKGIRVNGVAPGPIWTPLIPSSFD--EKKVSQFGSNVPMQRPGQPYELAPAYV 266
Query: 246 FLALNPAAGYITGQVLTIDGGMVM 269
           +LA + ++ Y+TGQ++ ++GG+++
Sbjct: 267 YLASSDSS-YVTGQMIHVNGGVIV 289

>pdb|3TL3|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 257

Iteration: 1
 Score =  107 bits (267), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 84/258 (32%), Positives = 128/258 (49%), Gaps = 30/258 (11%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VAVVTG + G+G A    L  AG +V+V   R     E+V  ++   G +A     DV+ 
Sbjct: 11  VAVVTGGASGLGLATTKRLLDAGAQVVVLDIRG----EDVVADL---GDRARFAAADVTD 63
Query: 88  EADVESMIKTAVDAWGTVDILINNAG-------ITRDTLLMRMKKSQWQDVIDLNLTGVF 140
           EA V S +  A +  GT+ I++N AG       ++RD +      + ++ ++D+NL G F
Sbjct: 64  EAAVASALDLA-ETMGTLRIVVNCAGTGNAIRVLSRDGVF---SLAAFRKIVDINLVGSF 119
Query: 141 --------LCTQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAK 192
                      +           G IIN ASV    G IGQA YSA+K GV+G+T  +A+
Sbjct: 120 NVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIAR 179
Query: 193 EYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPL-GRYGQPEEVAGLVEFLALNP 251
           + AS  I V  IAPG   + + A L E+    + +++P   R G P+E   L   +  NP
Sbjct: 180 DLASHRIRVMTIAPGLFDTPLLASLPEEARASLGKQVPHPSRLGNPDEYGALAVHIIENP 239
Query: 252 AAGYITGQVLTIDGGMVM 269
               + G+V+ +DG + M
Sbjct: 240 ---MLNGEVIRLDGAIRM 254

>pdb|3V8B|A Chain A, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From Sinorhizobium Meliloti 1021 Length = 283

Iteration: 1
 Score =  107 bits (266), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 87/260 (33%), Positives = 133/260 (51%), Gaps = 14/260 (5%)
Query: 19  EAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQA 78
           ++  N  +PVA++TGA  GIGRA A +L   G  V     R+  E EEV  EI  +GGQA
Sbjct: 21  QSXXNQPSPVALITGAGSGIGRATALALAADGVTVGA-LGRTRTEVEEVADEIVGAGGQA 79
Query: 79  LTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITR-DTLLMRMKKSQWQDVIDLNLT 137
           +    DVS E    + ++  V  +G +DI++ NAGI      +  +K  +W + I +NL 
Sbjct: 80  IALEADVSDELQXRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLR 139
Query: 138 GVFLCTQXXXXXXXXXXXGRIINIASVVG--LVGNIGQANYSAAKAGVIGLTKTVAKEYA 195
           G FL              G I+ ++S+ G       G   Y+A KA  + + + +A E  
Sbjct: 140 GTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALELG 199
Query: 196 SRNINVNAIAPGFIASDMT--AKLGEDLEKKILEKIPLGRY----GQP---EEVAGLVEF 246
             +I VNA+ PG I ++++   KL  + E  I  + P G+     GQP   E+VA L+ F
Sbjct: 200 KHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIRF 259
Query: 247 LALNPAAGYITGQVLTIDGG 266
           L ++  A ++TG  + IDGG
Sbjct: 260 L-VSERARHVTGSPVWIDGG 278

>pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh) (Apoenyzme) From Lactobacillus Brevis Length = 251

Iteration: 1
 Score =  107 bits (266), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 126/250 (50%), Gaps = 7/250 (2%)
Query: 21  AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALT 80
           +  ++  VA++TG + GIG A+AT   + G KV++   R S   E+  K +  +  Q   
Sbjct: 1   SNRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMIT-GRHSDVGEKAAKSV-GTPDQIQF 58
Query: 81  FGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVF 140
           F  D S E     +      A+G V  L+NNAGI  +  +     ++W+ ++ +NL GVF
Sbjct: 59  FQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVF 118
Query: 141 LCTQXXXXXXXXXXXG-RIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASR-- 197
             T+           G  IIN++S+ G VG+     Y+A+K  V  ++K+ A + A +  
Sbjct: 119 FGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDY 178
Query: 198 NINVNAIAPGFIASDMTAKL-GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYI 256
           ++ VN + PG+I + +   L G +       K P+G  G+P ++A +  +LA N +  + 
Sbjct: 179 DVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNESK-FA 237
Query: 257 TGQVLTIDGG 266
           TG    +DGG
Sbjct: 238 TGSEFVVDGG 247

>pdb|3T7C|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nad Length = 299

Iteration: 1
 Score =  107 bits (266), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 89/286 (31%), Positives = 139/286 (48%), Gaps = 35/286 (12%)
Query: 15  QATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAG--------CKVL--VNYARSSKE- 63
           Q     A  VE  VA +TGA+RG GR+ A +L + G        CK L  V    S+ + 
Sbjct: 17  QGPGSMAGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDD 76
Query: 64  AEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRD-TLLMR 122
             E  +++EA G + +    DV     +++ +   V   G +DI++ NA +  + T L R
Sbjct: 77  LAETVRQVEALGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNR 136
Query: 123 MKKSQWQDVIDLNLTGVFLCTQXXXXXXXXXXXG-RIINIASVVGLVG--NIGQANYSAA 179
           M    W+D+ID+NL G ++  +           G  I+  +S+ GL G  NIG  NY A+
Sbjct: 137 MDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIG--NYIAS 194
Query: 180 KAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAK------LGEDLEKKILEK----- 228
           K G+ GL +T+A E   RNI VN + P  +A+ M            DLE   +E      
Sbjct: 195 KHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVAS 254
Query: 229 -----IPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 269
                +P+  Y +P +++  + FL ++  A YITG  L +DGG ++
Sbjct: 255 RQMHVLPIP-YVEPADISNAILFL-VSDDARYITGVSLPVDGGALL 298

>pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 271

Iteration: 1
 Score =  106 bits (265), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 122/251 (48%), Gaps = 14/251 (5%)
Query: 24  VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGG 83
           +E  VA++TGA  GIG   +  L +AG +V++    +     ++     + G  A+    
Sbjct: 9   LENKVAIITGACGGIGLETSRVLARAGARVVL----ADLPETDLAGAAASVGRGAVHHVV 64
Query: 84  DVSKEADVESMIKTAVDAWGTVDILINNAGITR--DTLLMRMKKSQWQDVIDLNLTGVFL 141
           D++ E  V ++I   +D +G +DI+ NNA  +   D L+ +M    W D   +N  G  L
Sbjct: 65  DLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTML 124
Query: 142 CTQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINV 201
             +           G I+NI+S            Y+  KA +  LT+ VA +Y    +  
Sbjct: 125 MCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQYGRHGVRC 184
Query: 202 NAIAPGFIASDMTAKLGEDLEKKILEKIPL----GRYGQPEEVAGLVEFLALNPAAGYIT 257
           NAIAPG +    T +L   L + I++        GR G+P E+A LV FLA + AA +IT
Sbjct: 185 NAIAPGLV---RTPRLEVGLPQPIVDIFATHHLAGRIGEPHEIAELVCFLASDRAA-FIT 240
Query: 258 GQVLTIDGGMV 268
           GQV+  D G++
Sbjct: 241 GQVIAADSGLL 251

>pdb|3I4F|A Chain A, Structure Of Putative 3-oxoacyl-reductase From Bacillus Thuringiensis Length = 264

Iteration: 1
 Score =  106 bits (265), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 75/242 (30%), Positives = 119/242 (49%), Gaps = 7/242 (2%)
Query: 29  AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTF-GGDVSK 87
           A++T  ++G+G+ V   L   G  V V Y  S   A E  KE      + L F   DV+K
Sbjct: 10  ALITAGTKGLGKQVTEKLLAKGYSVTVTY-HSDTTAMETMKETYKDVEERLQFVQADVTK 68
Query: 88  EADVESMIKTAVDAWGTVDILINNAG--ITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQX 145
           + D+  +++ A+  +G +D LINNAG  +     L+  ++ +W ++I  NLT VF   + 
Sbjct: 69  KEDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKL 128
Query: 146 XXXXXXXXXXGRIIN--IASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNA 203
                     GRIIN          G I ++ ++AAK G++ LTKTVA E A   I  N 
Sbjct: 129 VVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANM 188
Query: 204 IAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTI 263
           + PG I  +M     ++  +      P+GR G  E++A  + FL  +  +  ITG ++ +
Sbjct: 189 VCPGDIIGEMKEATIQEARQLKEHNTPIGRSGTGEDIARTISFLCEDD-SDMITGTIIEV 247
Query: 264 DG 265
            G
Sbjct: 248 TG 249

>pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus Brevis In Complex With Phenylethanol And Nadh Length = 251

Iteration: 1
 Score =  106 bits (265), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 126/250 (50%), Gaps = 7/250 (2%)
Query: 21  AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALT 80
           +  ++  VA++TG + GIG A+AT   + G KV++   R S   E+  K +  +  Q   
Sbjct: 1   SNRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMIT-DRHSDVGEKAAKSV-GTPDQIQF 58
Query: 81  FGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVF 140
           F  D S E     +      A+G V  L+NNAGI  +  +     ++W+ ++ +NL GVF
Sbjct: 59  FQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVF 118
Query: 141 LCTQXXXXXXXXXXXG-RIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASR-- 197
             T+           G  IIN++S+ G VG+     Y+A+K  V  ++K+ A + A +  
Sbjct: 119 FGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDY 178
Query: 198 NINVNAIAPGFIASDMTAKL-GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYI 256
           ++ VN + PG+I + +   L G +       K P+G  G+P ++A +  +LA N +  + 
Sbjct: 179 DVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNESK-FA 237
Query: 257 TGQVLTIDGG 266
           TG    +DGG
Sbjct: 238 TGSEFVVDGG 247

>pdb|3IJR|A Chain A, 2.05 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad+ Length = 291

Iteration: 1
 Score =  106 bits (265), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 130/264 (49%), Gaps = 9/264 (3%)
Query: 10  VATIEQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCK 69
           +   E    + ++ ++    ++TG   GIGRAV+ +  K G  + + Y     +A E  +
Sbjct: 31  LPQFEDPNYKGSEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQ 90
Query: 70  EIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINN-AGITRDTLLMRMKKSQW 128
            +E  G + +   GD+S E   + +++  V   G+++IL+NN A       L  +   Q 
Sbjct: 91  YVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQL 150
Query: 129 QDVIDLNLTGVFLCTQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTK 188
           +    +N+   F  T+             IIN AS+V   GN    +YSA K  ++  T+
Sbjct: 151 EKTFRINIFSYFHVTKAALSHLKQGDV--IINTASIVAYEGNETLIDYSATKGAIVAFTR 208
Query: 189 TVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILE---KIPLGRYGQPEEVAGLVE 245
           ++++    + I VN +APG I + +     +  EKK+ +    +P  R GQP E+A    
Sbjct: 209 SLSQSLVQKGIRVNGVAPGPIWTPLIPSSFD--EKKVSQFGSNVPXQRPGQPYELAPAYV 266
Query: 246 FLALNPAAGYITGQVLTIDGGMVM 269
           +LA + ++ Y+TGQ + ++GG+++
Sbjct: 267 YLASSDSS-YVTGQXIHVNGGVIV 289

>pdb|3BMC|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288

Iteration: 1
 Score =  105 bits (262), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/269 (29%), Positives = 135/269 (50%), Gaps = 25/269 (9%)
Query: 23  NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEI-EASGGQALTF 81
           ++EAP AVVTGA++ IGRA+A  L + G +V+++Y  S++ A  +  E+ +     A+  
Sbjct: 20  HMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVC 79
Query: 82  GGDVSKE----ADVESMIKTAVDAWGTVDILINNAGITRDTLLM----------RMKKSQ 127
             D++      A  E +I +   A+G  D+L+NNA     T L+          +  ++Q
Sbjct: 80  QADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQ 139
Query: 128 WQDVIDLNLTGVFLCT------QXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKA 181
             ++I  N    FL T      Q             I+N+   +     +  + Y+  K 
Sbjct: 140 VAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLYNMGKH 199
Query: 182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRY-GQPEEV 240
            ++GLT++ A E A   I VN +APG   S +   +GE+ + K   K+PLGR     E++
Sbjct: 200 ALVGLTQSAALELAPYGIRVNGVAPG--VSLLPVAMGEEEKDKWRRKVPLGRREASAEQI 257
Query: 241 AGLVEFLALNPAAGYITGQVLTIDGGMVM 269
           A  V FL ++ +A YITG ++ +DGG+ +
Sbjct: 258 ADAVIFL-VSGSAQYITGSIIKVDGGLSL 285

>pdb|2Z1N|A Chain A, Crystal Structure Of Ape0912 From Aeropyrum Pernix K1 Length = 260

Iteration: 1
 Score =  105 bits (262), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 123/256 (48%), Gaps = 16/256 (6%)
Query: 24  VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEA--SGGQALTF 81
           ++  +AVVT  S G+G A A  L + G ++L+ ++R+ ++ E     I +  SG Q    
Sbjct: 5   IQGKLAVVTAGSSGLGFASALELARNGARLLL-FSRNREKLEAAASRIASLVSGAQVDIV 63
Query: 82  GGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFL 141
            GD+ +  D++ + + A D  G  DIL+ + G  R    M +    W +   L       
Sbjct: 64  AGDIREPGDIDRLFEKARDL-GGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVW 122
Query: 142 CTQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINV 201
             +           GR++ I SV  L      A  +  +  VIG+ +T+A E A   + V
Sbjct: 123 VGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTLALELAPHGVTV 182
Query: 202 NAIAPGFIASDMTAKLGEDLEKK-----------ILEKIPLGRYGQPEEVAGLVEFLALN 250
           NA+ P  I +D    L E+  ++           +  +IP+GR G+PEE+A +V FLA +
Sbjct: 183 NAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELASVVAFLA-S 241
Query: 251 PAAGYITGQVLTIDGG 266
             A +ITG V+ +DGG
Sbjct: 242 EKASFITGAVIPVDGG 257

>pdb|3JQ7|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288

Iteration: 1
 Score =  105 bits (262), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/269 (29%), Positives = 135/269 (50%), Gaps = 25/269 (9%)
Query: 23  NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEI-EASGGQALTF 81
           ++EAP AVVTGA++ IGRA+A  L + G +V+++Y  S++ A  +  E+ +     A+  
Sbjct: 20  HMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVX 79
Query: 82  GGDVSKE----ADVESMIKTAVDAWGTVDILINNAGITRDTLLM----------RMKKSQ 127
             D++      A  E +I +   A+G  D+L+NNA     T L+          +  ++Q
Sbjct: 80  QADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQ 139
Query: 128 WQDVIDLNLTGVFLCT------QXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKA 181
             ++I  N    FL T      Q             I+N+   +     +  + Y+  K 
Sbjct: 140 VAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLYNMGKH 199
Query: 182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRY-GQPEEV 240
            ++GLT++ A E A   I VN +APG   S +   +GE+ + K   K+PLGR     E++
Sbjct: 200 ALVGLTQSAALELAPYGIRVNGVAPG--VSLLPVAMGEEEKDKWRRKVPLGRREASAEQI 257
Query: 241 AGLVEFLALNPAAGYITGQVLTIDGGMVM 269
           A  V FL ++ +A YITG ++ +DGG+ +
Sbjct: 258 ADAVIFL-VSGSAQYITGSIIKVDGGLSL 285

>pdb|3BMC|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288

Iteration: 1
 Score =  105 bits (261), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/269 (29%), Positives = 135/269 (50%), Gaps = 25/269 (9%)
Query: 23  NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEI-EASGGQALTF 81
           ++EAP AVVTGA++ IGRA+A  L + G +V+++Y  S++ A  +  E+ +     A+  
Sbjct: 20  HMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVC 79
Query: 82  GGDVSKE----ADVESMIKTAVDAWGTVDILINNAGITRDTLLM----------RMKKSQ 127
             D++      A  E +I +   A+G  D+L+NNA     T L+          +  ++Q
Sbjct: 80  QADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQ 139
Query: 128 WQDVIDLNLTGVFLCT------QXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKA 181
             ++I  N    FL T      Q             I+N+   +     +  + Y+  K 
Sbjct: 140 VAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKH 199
Query: 182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRY-GQPEEV 240
            ++GLT++ A E A   I VN +APG   S +   +GE+ + K   K+PLGR     E++
Sbjct: 200 ALVGLTQSAALELAPYGIRVNGVAPG--VSLLPVAMGEEEKDKWRRKVPLGRREASAEQI 257
Query: 241 AGLVEFLALNPAAGYITGQVLTIDGGMVM 269
           A  V FL ++ +A YITG ++ +DGG+ +
Sbjct: 258 ADAVIFL-VSGSAQYITGSIIKVDGGLSL 285

>pdb|3JQ7|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288

Iteration: 1
 Score =  105 bits (261), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 80/269 (29%), Positives = 135/269 (50%), Gaps = 25/269 (9%)
Query: 23  NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEI-EASGGQALTF 81
           ++EAP AVVTGA++ IGRA+A  L + G +V+++Y  S++ A  +  E+ +     A+  
Sbjct: 20  HMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVX 79
Query: 82  GGDVSKE----ADVESMIKTAVDAWGTVDILINNAGITRDTLLM----------RMKKSQ 127
             D++      A  E +I +   A+G  D+L+NNA     T L+          +  ++Q
Sbjct: 80  QADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQ 139
Query: 128 WQDVIDLNLTGVFLCT------QXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKA 181
             ++I  N    FL T      Q             I+N+   +     +  + Y+  K 
Sbjct: 140 VAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKH 199
Query: 182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRY-GQPEEV 240
            ++GLT++ A E A   I VN +APG   S +   +GE+ + K   K+PLGR     E++
Sbjct: 200 ALVGLTQSAALELAPYGIRVNGVAPG--VSLLPVAMGEEEKDKWRRKVPLGRREASAEQI 257
Query: 241 AGLVEFLALNPAAGYITGQVLTIDGGMVM 269
           A  V FL ++ +A YITG ++ +DGG+ +
Sbjct: 258 ADAVIFL-VSGSAQYITGSIIKVDGGLSL 285

>pdb|2C7V|A Chain A, Structure Of Trypanosoma Brucei Pteridine Reductase (Ptr1) In Ternary Complex With Cofactor And The Antifolate Methotrexate Length = 268

Iteration: 1
 Score =  105 bits (261), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 80/268 (29%), Positives = 134/268 (50%), Gaps = 25/268 (9%)
Query: 24  VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEI-EASGGQALTFG 82
           +EAP AVVTGA++ IGRA+A  L + G +V+++Y  S++ A  +  E+ +     A+   
Sbjct: 1   MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVXQ 60
Query: 83  GDVSKE----ADVESMIKTAVDAWGTVDILINNAGITRDTLLM----------RMKKSQW 128
            D++      A  E +I +   A+G  D+L+NNA     T L+          +  ++Q 
Sbjct: 61  ADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQV 120
Query: 129 QDVIDLNLTGVFLCT------QXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAG 182
            ++I  N    FL T      Q             I+N+   +     +  + Y+  K  
Sbjct: 121 AELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLYNMGKHA 180
Query: 183 VIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRY-GQPEEVA 241
           ++GLT++ A E A   I VN +APG   S +   +GE+ + K   K+PLGR     E++A
Sbjct: 181 LVGLTQSAALELAPYGIRVNGVAPG--VSLLPVAMGEEEKDKWRRKVPLGRREASAEQIA 238
Query: 242 GLVEFLALNPAAGYITGQVLTIDGGMVM 269
             V FL ++ +A YITG ++ +DGG+ +
Sbjct: 239 DAVIFL-VSGSAQYITGSIIKVDGGLSL 265

>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262

Iteration: 1
 Score =  104 bits (260), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 75/231 (32%), Positives = 120/231 (51%), Gaps = 10/231 (4%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VAVVTGASRGIG A+A  LG  G +V++  AR  ++   V +EI A+GG+A +   D+S 
Sbjct: 31  VAVVTGASRGIGAAIARKLGSLGARVVLT-ARDVEKLRAVEREIVAAGGEAESHACDLSH 89
Query: 88  EADVESMIKTAVDAWGTVDILINNAGI-TRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXX 146
              + +     + A G  D+L+NNAG+      L  MK ++W  +I +NL   +L  +  
Sbjct: 90  SDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAF 149
Query: 147 XXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
                    G IINI+S+ G       A Y+A+K G+ GL  + A+E     + V+ +AP
Sbjct: 150 APAMIAAKRGHIINISSLAGKNPVADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAP 209
Query: 207 GFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYIT 257
           G + ++    +G   +K  L  I      +P+++A +V  LA      +I+
Sbjct: 210 GSVRTEF--GVGLSAKKSALGAI------EPDDIADVVALLATQADQSFIS 252

>pdb|2WD7|A Chain A, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268

Iteration: 1
 Score =  104 bits (260), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 80/268 (29%), Positives = 134/268 (50%), Gaps = 25/268 (9%)
Query: 24  VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEI-EASGGQALTFG 82
           +EAP AVVTGA++ IGRA+A  L + G +V+++Y  S++ A  +  E+ +     A+   
Sbjct: 1   MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQ 60
Query: 83  GDVSKE----ADVESMIKTAVDAWGTVDILINNAGITRDTLLM----------RMKKSQW 128
            D++      A  E +I +   A+G  D+L+NNA     T L+          +  ++Q 
Sbjct: 61  ADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQV 120
Query: 129 QDVIDLNLTGVFLCT------QXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAG 182
            ++I  N    FL T      Q             I+N+   +     +  + Y+  K  
Sbjct: 121 AELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHA 180
Query: 183 VIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRY-GQPEEVA 241
           ++GLT++ A E A   I VN +APG   S +   +GE+ + K   K+PLGR     E++A
Sbjct: 181 LVGLTQSAALELAPYGIRVNGVAPG--VSLLPVAMGEEEKDKWRRKVPLGRREASAEQIA 238
Query: 242 GLVEFLALNPAAGYITGQVLTIDGGMVM 269
             V FL ++ +A YITG ++ +DGG+ +
Sbjct: 239 DAVIFL-VSGSAQYITGSIIKVDGGLSL 265

>pdb|2WD7|B Chain B, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268

Iteration: 1
 Score =  104 bits (259), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 80/268 (29%), Positives = 134/268 (50%), Gaps = 25/268 (9%)
Query: 24  VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEI-EASGGQALTFG 82
           +EAP AVVTGA++ IGRA+A  L + G +V+++Y  S++ A  +  E+ +     A+   
Sbjct: 1   MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVXQ 60
Query: 83  GDVSKE----ADVESMIKTAVDAWGTVDILINNAGITRDTLLM----------RMKKSQW 128
            D++      A  E +I +   A+G  D+L+NNA     T L+          +  ++Q 
Sbjct: 61  ADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQV 120
Query: 129 QDVIDLNLTGVFLCT------QXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAG 182
            ++I  N    FL T      Q             I+N+   +     +  + Y+  K  
Sbjct: 121 AELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHA 180
Query: 183 VIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRY-GQPEEVA 241
           ++GLT++ A E A   I VN +APG   S +   +GE+ + K   K+PLGR     E++A
Sbjct: 181 LVGLTQSAALELAPYGIRVNGVAPG--VSLLPVAMGEEEKDKWRRKVPLGRREASAEQIA 238
Query: 242 GLVEFLALNPAAGYITGQVLTIDGGMVM 269
             V FL ++ +A YITG ++ +DGG+ +
Sbjct: 239 DAVIFL-VSGSAQYITGSIIKVDGGLSL 265

>pdb|1ZEM|A Chain A, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase Length = 262

Iteration: 1
 Score =  103 bits (257), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 79/257 (30%), Positives = 126/257 (49%), Gaps = 21/257 (8%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGCKV-LVNYARSSKEAEEVCKEIEASGGQALTFGGDVS 86
           V +VTGA   IG A A  L + G  + L++  R + E  E    +   G +A ++  DV+
Sbjct: 9   VCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEAS--VREKGVEARSYVCDVT 66
Query: 87  KEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQ-WQDVIDLNLTGVFLCTQX 145
            E  V   + + V  +G +D L NNAG       ++   S  +  V+ +N+TG F   + 
Sbjct: 67  SEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKA 126
Query: 146 XXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIA 205
                     GRI+N AS+ G+ G    A Y  +K  +I LT+T A + A  NI VNAI+
Sbjct: 127 VSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAIS 186
Query: 206 PGFIAS--------DMTAKLGED--------LEKKILEKIPLGRYGQPEEVAGLVEFLAL 249
           PG++          ++ AK+G          + ++++  +P+ RYG   E+ G+V FL L
Sbjct: 187 PGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVAFL-L 245
Query: 250 NPAAGYITGQVLTIDGG 266
              + ++TG  L I GG
Sbjct: 246 GDDSSFMTGVNLPIAGG 262

>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297

Iteration: 1
 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 122/255 (47%), Gaps = 17/255 (6%)
Query: 30  VVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGG---DVS 86
           ++TG+S GIGR+ A    K G +V +   R+    EE  ++I  +G  A        DV+
Sbjct: 30  IITGSSNGIGRSAAVIFAKEGAQVTIT-GRNEDRLEETKQQILKAGVPAEKINAVVADVT 88
Query: 87  KEADVESMIKTAVDAWGTVDILINNAG--ITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQ 144
           + +  + +I T +  +G +DIL+NNAG  +   T         +Q    LN   V   TQ
Sbjct: 89  EASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQ 148
Query: 145 XXXXXXXXXXXGRIINIASVV-GLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNA 203
                      G I+N++S+V G   + G   Y+ AKA +   T+  A +     + VN+
Sbjct: 149 KTKEHLIKTK-GEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNS 207
Query: 204 IAPGFIASDMTAKLG--EDLEKKIL-------EKIPLGRYGQPEEVAGLVEFLALNPAAG 254
           ++PG +A+     +G  E    K+        E IP+G  G+PEE+A ++ FLA    + 
Sbjct: 208 VSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLADRNLSS 267
Query: 255 YITGQVLTIDGGMVM 269
           YI GQ +  DGG  +
Sbjct: 268 YIIGQSIVADGGSTL 282

>pdb|3TFO|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From Sinorhizobium Meliloti Length = 264

Iteration: 1
 Score =  102 bits (253), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 66/186 (35%), Positives = 97/186 (52%), Gaps = 3/186 (1%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           V ++TGAS GIG  +A  LG AG K+L+  AR     E +  EI  +GG AL    DV+ 
Sbjct: 6   VILITGASGGIGEGIARELGVAGAKILLG-ARRQARIEAIATEIRDAGGTALAQVLDVTD 64
Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXX 147
              V +  + AVD WG +D+L+NNAG+   + L  +K  +W+ +ID+N+ GV        
Sbjct: 65  RHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVL 124
Query: 148 XXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
                   G+IINI S+  L      A Y A K  V  ++  + +E  S NI V  + PG
Sbjct: 125 PIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVRAISDGLRQE--STNIRVTCVNPG 182
Query: 208 FIASDM 213
            + S++
Sbjct: 183 VVESEL 188

>pdb|3R3S|A Chain A, Structure Of The Ygha Oxidoreductase From Salmonella Enterica Length = 294

Iteration: 1
 Score =  101 bits (252), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 126/244 (51%), Gaps = 11/244 (4%)
Query: 29  AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKE-AEEVCKEIEASGGQALTFGGDVSK 87
           A+VTG   GIGRA A +  + G  V +NY  + +E A++V   IE  G +A+   GD+S 
Sbjct: 52  ALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSD 111
Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMK---KSQWQDVIDLNLTGVFLCTQ 144
           E+   S++  A +A G +DIL   AG  + T +  +K     Q+Q    +N+  +F  TQ
Sbjct: 112 ESFARSLVHKAREALGGLDILALVAG--KQTAIPEIKDLTSEQFQQTFAVNVFALFWITQ 169
Query: 145 XXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAI 204
                        II  +S+     +    +Y+A KA ++  ++ +AK+ A + I VN +
Sbjct: 170 EAIPLLPKGAS--IITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIV 227
Query: 205 APGFIASDMTAKLGEDLEK--KILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLT 262
           APG I + +    G+  +K  +  ++ P+ R GQP E+A +  +LA    + Y+T +V  
Sbjct: 228 APGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQ-ESSYVTAEVHG 286
Query: 263 IDGG 266
           + GG
Sbjct: 287 VCGG 290

>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263

Iteration: 1
 Score =  100 bits (249), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 120/258 (46%), Gaps = 15/258 (5%)
Query: 24  VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEI-EASGGQALTFG 82
           +   VAV+TG+S GIG A+A    K G  +++  AR      E  + + E  G + L   
Sbjct: 5   ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVL-VARQVDRLHEAARSLKEKFGVRVLEVA 63
Query: 83  GDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLC 142
            DV+    V++++++   ++G  DIL+NNAG   +  +M     +WQ   +L++      
Sbjct: 64  VDVATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELHVMAAVRL 123
Query: 143 TQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
            +           G II+ AS+  +     +  Y+  KA ++  +KT+A E    NI VN
Sbjct: 124 ARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIRVN 183
Query: 203 AIAPGFI--------ASDMTAKLGED----LEKKILEKIPLGRYGQPEEVAGLVEFLALN 250
            I PG I        A ++T   G D    L+    E  P+ R+  PEE+A    FL  +
Sbjct: 184 CINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANFFVFLC-S 242
Query: 251 PAAGYITGQVLTIDGGMV 268
             A Y  G    +DGGM+
Sbjct: 243 ERATYSVGSAYFVDGGML 260

>pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reduc Brucella Melitensis Length = 261

Iteration: 1
 Score =  100 bits (248), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 89/257 (34%), Positives = 135/257 (52%), Gaps = 18/257 (7%)
Query: 21  AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALT 80
           + ++E  VA++TGA  G G  +A    K G KV++   R    AE V  EI   G  AL 
Sbjct: 4   SMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVI-VDRDKAGAERVAGEI---GDAALA 59
Query: 81  FGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRM-KKSQWQDVIDLNLTGV 139
              D+SKEADV++ ++ A+  +G VDIL+NNAGI        + +  ++  ++ +N+ GV
Sbjct: 60  VAADISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGV 119
Query: 140 FLCT-QXXXXXXXXXXXGR---IINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYA 195
           +L T +           G+   I+N+AS          A Y+A K  V+ +TK +A E A
Sbjct: 120 YLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAIELA 179
Query: 196 SRNINVNAIAPGFIASD---MTAKLGEDLE---KKILEKIPLGRYGQPEEVAGLVEFLAL 249
              I V A+ P  +A +   +T  +GED E   KK  + IP+GR  +P+++A    FL  
Sbjct: 180 PAKIRVVALNP--VAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEAAAFLC- 236
Query: 250 NPAAGYITGQVLTIDGG 266
           +P A  ITG  L +DGG
Sbjct: 237 SPQASMITGVALDVDGG 253

>pdb|4E6P|A Chain A, Crystal Structure Of A Probable Sorbitol Dehydrogenase (Target Psi- 012078) From Sinorhizobium Meliloti 1021 Length = 259

Iteration: 1
 Score = 99.8 bits (247), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 82/262 (31%), Positives = 126/262 (48%), Gaps = 27/262 (10%)
Query: 22  QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLV---NYARSSKEAEEVCKEIEASGGQA 78
           + +E   A++TG++RGIGRA A +  + G  V +   +  R+ + A E+       G  A
Sbjct: 4   KRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI-------GPAA 56
Query: 79  LTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTG 138
                DV+++  +++ I   V+  G +DIL+NNA +     ++ + +  ++ +  +N+ G
Sbjct: 57  YAVQXDVTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAG 116
Query: 139 -VFLCTQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASR 197
            +F               G+IIN AS  G  G    A Y A KA VI LT++   +    
Sbjct: 117 TLFTLQAAARQXIAQGRGGKIINXASQAGRRGEALVAIYCATKAAVISLTQSAGLDLIKH 176
Query: 198 NINVNAIAPGFIASDMTAKLGEDL-----------EKKIL--EKIPLGRYGQPEEVAGLV 244
            INVNAIAPG +  D     G D            EKK L  E +P GR G  E++ G  
Sbjct: 177 RINVNAIAPGVV--DGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRXGTAEDLTGXA 234
Query: 245 EFLALNPAAGYITGQVLTIDGG 266
            FLA +  + YI  Q   +DGG
Sbjct: 235 IFLA-SAESDYIVSQTYNVDGG 255

>pdb|1MXH|A Chain A, Crystal Structure Of Substrate Complex Of Putative Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi Length = 276

Iteration: 1
 Score = 99.4 bits (246), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/280 (28%), Positives = 137/280 (48%), Gaps = 30/280 (10%)
Query: 13  IEQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIE 72
           + + ++EA+   E P AV+TG +R IG ++A  L + G +V+V+Y  S   A+ +  E+ 
Sbjct: 1   MNETSHEAS---ECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELN 57
Query: 73  AS-GGQALTFGGDVSKEAD----VESMIKTAVDAWGTVDILINNAGITRDTLLM------ 121
           A+  G A+   GD+S  +      E +I  +  A+G  D+L+NNA     T L+      
Sbjct: 58  AARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTN 117
Query: 122 -----RMKKSQWQDVIDLNLTGVFLCTQXXXXXXXXXXXGRIINIASVVGLVGNI----- 171
                +   +Q  ++   N        +            R  N+ SVV L   +     
Sbjct: 118 GAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNL-SVVNLCDAMTDLPL 176
Query: 172 -GQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIP 230
            G   Y+ AK  + GLT+  A E A R+I VNA+APG   S +   + ++ +++   K+P
Sbjct: 177 PGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGL--SLLPPAMPQETQEEYRRKVP 234
Query: 231 LGRY-GQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 269
           LG+      ++A  + FL ++  AGYITG  L +DGG+++
Sbjct: 235 LGQSEASAAQIADAIAFL-VSKDAGYITGTTLKVDGGLIL 273

>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263

Iteration: 1
 Score = 98.2 bits (243), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 119/258 (46%), Gaps = 15/258 (5%)
Query: 24  VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEI-EASGGQALTFG 82
           +   VAV+TG+S GIG A+A    K G  +++  AR      E  + + E  G + L   
Sbjct: 5   ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVL-VARQVDRLHEAARSLKEKFGVRVLEVA 63
Query: 83  GDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLC 142
            DV+    V++++++   ++G  DIL+NNAG   +  +M     +WQ   +L +      
Sbjct: 64  VDVATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRL 123
Query: 143 TQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
            +           G II+ AS+  +     +  Y+  KA ++  +KT+A E    NI VN
Sbjct: 124 ARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIRVN 183
Query: 203 AIAPGFI--------ASDMTAKLGED----LEKKILEKIPLGRYGQPEEVAGLVEFLALN 250
            I PG I        A ++T   G D    L+    E  P+ R+  PEE+A    FL  +
Sbjct: 184 CINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANFFVFLC-S 242
Query: 251 PAAGYITGQVLTIDGGMV 268
             A Y  G    +DGGM+
Sbjct: 243 ERATYSVGSAYFVDGGML 260

>pdb|1JA9|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene Reductase In Complex With Nadph And Pyroquilon Length = 274

Iteration: 1
 Score = 97.4 bits (241), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 80/263 (30%), Positives = 133/263 (50%), Gaps = 17/263 (6%)
Query: 18  NEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQ 77
           ++A++ +   VA+ TGA RGIGR +A  LG+ G  V+VNY  SSK AEEV  E++  G Q
Sbjct: 13  SDASKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQ 72
Query: 78  ALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLT 137
            +    D+SK ++V ++   AV  +G +D +++N+G+      + + +  +  V +LN  
Sbjct: 73  GVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTR 132
Query: 138 GVFLCTQXXXXXXXXXXXGRIINIASVVGLVGNI-GQANYSAAKAGVIGLTKTVAKEYAS 196
           G F   Q           GRII  +S+  ++  I   A Y+ +KA V G  +  A +  +
Sbjct: 133 GQFFVAQ--QGLKHCRRGGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGA 190
Query: 197 RNINVNAIAPGFIASDMTAKLG-------------EDLEKKILEKIPLGRYGQPEEVAGL 243
           + + VN IAPG + +DM  +               E +++ +    PL R G P ++   
Sbjct: 191 KGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRA 250
Query: 244 VEFLALNPAAGYITGQVLTIDGG 266
           V  L    +  +I GQV+ + GG
Sbjct: 251 VSALCQEESE-WINGQVIKLTGG 272

>pdb|1MXF|A Chain A, Crystal Structure Of Inhibitor Complex Of Putative Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi Length = 276

Iteration: 1
 Score = 97.4 bits (241), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 81/280 (28%), Positives = 135/280 (48%), Gaps = 30/280 (10%)
Query: 13  IEQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIE 72
           + + ++EA+   E P AV+TG +R IG ++A  L + G +V+V+Y  S   A+ +  E+ 
Sbjct: 1   MNETSHEAS---ECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELN 57
Query: 73  AS-GGQALTFGGDVSKEAD----VESMIKTAVDAWGTVDILINNAGITRDTLLM------ 121
           A+  G A+   GD+S  +      E +I  +  A+G  D+L+NNA     T L+      
Sbjct: 58  AARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTN 117
Query: 122 -----RMKKSQWQDVIDLNLTGVFLCTQXXXXXXXXXXXGRIINIASVVGLVGNI----- 171
                +   +Q  ++   N        +            R  N+ SVV L         
Sbjct: 118 GAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNL-SVVNLCDAXTDLPL 176
Query: 172 -GQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIP 230
            G   Y+ AK  + GLT+  A E A R+I VNA+APG   S +     ++ +++   K+P
Sbjct: 177 PGFCVYTXAKHALGGLTRAAALELAPRHIRVNAVAPGL--SLLPPAXPQETQEEYRRKVP 234
Query: 231 LGRY-GQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 269
           LG+      ++A  + FL ++  AGYITG  L +DGG+++
Sbjct: 235 LGQSEASAAQIADAIAFL-VSKDAGYITGTTLKVDGGLIL 273

>pdb|4FC6|A Chain A, Studies On Dcr Shed New Light On Peroxisomal Beta-Oxidation: Crystal Structure Of The Ternary Complex Of Pdcr Length = 277

Iteration: 1
 Score = 96.3 bits (238), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 122/244 (50%), Gaps = 8/244 (3%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIE-ASGGQALTFGGDVS 86
           VA +TG   GIG  +A    + GC  ++  +RS        +++  A+G + L    DV 
Sbjct: 29  VAFITGGGSGIGFRIAEIFMRHGCHTVIA-SRSLPRVLTAARKLAGATGRRCLPLSMDVR 87
Query: 87  KEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXX 146
               V + +  A+  +G +DILIN A          +  + ++ V+D++ +G F  ++  
Sbjct: 88  APPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVL 147
Query: 147 XXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
                    G I+NI + +G  G   Q +  +AKA V  +T+ +A E+  +NI VN++AP
Sbjct: 148 YEKFFRDHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAP 207
Query: 207 GFIA-SDMTAKLG---EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLT 262
           G I+ ++   +LG     L  K+    PL R G   E+A  V +LA +P A Y+TG VL 
Sbjct: 208 GPISGTEGLRRLGGPQASLSTKVTAS-PLQRLGNKTEIAHSVLYLA-SPLASYVTGAVLV 265
Query: 263 IDGG 266
            DGG
Sbjct: 266 ADGG 269

>pdb|1XG5|A Chain A, Structure Of Human Putative Dehydrogenase Mgc4172 In Complex With Nadp Length = 279

Iteration: 1
 Score = 96.3 bits (238), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 117/234 (50%), Gaps = 11/234 (4%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASG--GQALTFGGDV 85
           +A+VTGAS GIG AVA +L + G KV V  AR+    EE+  E +++G  G  + +  D+
Sbjct: 34  LALVTGASGGIGAAVARALVQQGLKV-VGCARTVGNIEELAAECKSAGYPGTLIPYRCDL 92
Query: 86  SKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQX 145
           S E D+ SM          VDI INNAG+ R   L+    S W+D+ ++N+  + +CT+ 
Sbjct: 93  SNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTRE 152
Query: 146 XXXXXXXXXX--GRIINIASVVG---LVGNIGQANYSAAKAGVIGLTKTVAKEY--ASRN 198
                       G IINI S+ G   L  ++    YSA K  V  LT+ + +E   A  +
Sbjct: 153 AYQSMKERNVDDGHIININSMSGHRVLPLSVTHF-YSATKYAVTALTEGLRQELREAQTH 211
Query: 199 INVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPA 252
           I    I+PG + +    KL +   +K        +  +PE+VA  V ++   PA
Sbjct: 212 IRATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCLKPEDVAEAVIYVLSTPA 265

>pdb|1H5Q|A Chain A, Mannitol Dehydrogenase From Agaricus Bisporus Length = 265

Iteration: 1
 Score = 96.3 bits (238), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 124/249 (49%), Gaps = 11/249 (4%)
Query: 30  VVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEI-EASGGQALTFGGDVSKE 88
           +VTG +RGIG A   ++  AG  V V Y RS+ +A EV +++ +  G +   +  DVS  
Sbjct: 18  IVTGGNRGIGLAFTRAVAAAGANVAVIY-RSAADAVEVTEKVGKEFGVKTKAYQCDVSNT 76
Query: 89  ADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVF-LCTQXXX 147
             V   I+      G +  LI NAG++       +    +  V D+N+ GVF  C     
Sbjct: 77  DIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAK 136
Query: 148 XXXXXXXXGRIINIASVVG-------LVGNIGQANYSAAKAGVIGLTKTVAKEYASRNIN 200
                   G I+  +S+         L G++ Q  Y+++KA    L K +A E+AS  I 
Sbjct: 137 LWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIR 196
Query: 201 VNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQV 260
           VNA++PG++ +D TA + + +       IPL R+ QPEE+ G    L L+  A Y+TG  
Sbjct: 197 VNALSPGYVNTDQTAHMDKKIRDHQASNIPLNRFAQPEEMTGQA-ILLLSDHATYMTGGE 255
Query: 261 LTIDGGMVM 269
             IDGG ++
Sbjct: 256 YFIDGGQLI 264

>pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF Unknown Function From Caenorhabditis Elegans With Cofactor Length = 280

Iteration: 1
 Score = 95.5 bits (236), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 121/256 (47%), Gaps = 23/256 (8%)
Query: 30  VVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASG---GQALTFGGDVS 86
           ++TG+S GIGR  A    + G  V +   RSS+  EE  + I  SG    Q  +   DV+
Sbjct: 10  IITGSSNGIGRTTAILFAQEGANVTIT-GRSSERLEETRQIILKSGVSEKQVNSVVADVT 68
Query: 87  KEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQ----WQDVIDLNLTGVFLC 142
            E   + +I + +  +G +D+L+NNAG             Q    +   + LNL  V   
Sbjct: 69  TEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEM 128
Query: 143 TQXXXXXXXXXXXGRIINIASVVGLVGNIGQAN---YSAAKAGVIGLTKTVAKEYASRNI 199
           T+           G I+N++S+V   G   Q +   Y+ AKA +   T++ A + A   I
Sbjct: 129 TKKVKPHLVASK-GEIVNVSSIVA--GPQAQPDFLYYAIAKAALDQYTRSTAIDLAKFGI 185
Query: 200 NVNAIAPGFIASDMTAKLG--EDLEKKIL-------EKIPLGRYGQPEEVAGLVEFLALN 250
            VN+++PG + +  T  +G  +   +K         E IP+G  G+PE +A ++ FLA  
Sbjct: 186 RVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILFLADR 245
Query: 251 PAAGYITGQVLTIDGG 266
             + YI GQ +  DGG
Sbjct: 246 NLSFYILGQSIVADGG 261

>pdb|2BD0|A Chain A, Chlorobium Tepidum Sepiapterin Reductase Complexed With Nadp And Sepiapterin Length = 244

Iteration: 1
 Score = 95.1 bits (235), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 70/241 (29%), Positives = 117/241 (48%), Gaps = 15/241 (6%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGCK------VLVNYARSSKEAEEVCKEIEASGGQALTF 81
           + ++TGA +GIGRA+A    +A         VLV  +R++ + E++  E  A G    T 
Sbjct: 4   ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTI 63
Query: 82  GGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFL 141
             D+S  ADV  +    V+ +G +D L+NNAG+ R   L  + +  +   ++ NL G F 
Sbjct: 64  TADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFF 123
Query: 142 CTQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASR-NIN 200
            TQ           G I  I SV         + Y  +K G  GL +T+ + YA + N+ 
Sbjct: 124 LTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETM-RLYARKCNVR 182
Query: 201 VNAIAPGFIASDMTAKLGEDLEKKIL--EKI--PLGR-YGQPEEVAGLVEFLALNPAAGY 255
           +  + PG + + M  K+ ++++  ++  E I  P+ + Y QP     +VE + L P +G 
Sbjct: 183 ITDVQPGAVYTPMWGKVDDEMQALMMMPEDIAAPVVQAYLQPSRT--VVEEIILRPTSGD 240
Query: 256 I 256
           I
Sbjct: 241 I 241

>pdb|3T4X|A Chain A, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE FROM Bacillus Anthracis Str. Ames Ancestor Length = 267

Iteration: 1
 Score = 94.4 bits (233), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 82/267 (30%), Positives = 127/267 (47%), Gaps = 19/267 (7%)
Query: 17  TNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGG 76
           +N     ++   A+VTG++ GIG+A+ATSL   G  VL+N  R  +   E  KEI A   
Sbjct: 1   SNAXHXQLKGKTALVTGSTAGIGKAIATSLVAEGANVLIN-GRREENVNETIKEIRAQYP 59
Query: 77  QALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNL 136
            A+     V  +   E   +  ++ +  VDILINN GI        +    W  + ++N+
Sbjct: 60  DAIL--QPVVADLGTEQGCQDVIEKYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNI 117
Query: 137 TGVFLCTQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYAS 196
                 T+           GR+I IAS   +  +   A+YSA K   + L++++A+    
Sbjct: 118 XSGVRLTRSYLKKXIERKEGRVIFIASEAAIXPSQEXAHYSATKTXQLSLSRSLAELTTG 177
Query: 197 RNINVNAIAPGFIASD-MTAKLG----------EDLEKKIL-EKIP---LGRYGQPEEVA 241
            N+ VN I PG   ++ +   L           E+ EK+   E  P   + R  +PEE+A
Sbjct: 178 TNVTVNTIXPGSTLTEGVETXLNSLYPNEQLTIEEAEKRFXKENRPTSIIQRLIRPEEIA 237
Query: 242 GLVEFLALNPAAGYITGQVLTIDGGMV 268
            LV FL+ +P +  I G  L IDGG+V
Sbjct: 238 HLVTFLS-SPLSSAINGSALRIDGGLV 263

>pdb|3PGX|A Chain A, Crystal Structure Of A Putative Carveol Dehydrogenase From Mycobacterium Paratuberculosis Bound To Nicotinamide Adenine Dinucleotide Length = 280

Iteration: 1
 Score = 94.4 bits (233), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 76/271 (28%), Positives = 129/271 (47%), Gaps = 29/271 (10%)
Query: 21  AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVL-----------VNYARSSKE-AEEVC 68
           A +++  VA +TGA+RG GR+ A  L   G  ++           V YA +S E  +E  
Sbjct: 10  AGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETA 69
Query: 69  KEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQW 128
           + +E  G +ALT   DV  +A +  ++   ++ +G +D+++ NAG+     +  +   QW
Sbjct: 70  RLVEDQGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQW 129
Query: 129 QDVIDLNLTGVFLCTQXXXXXXXXX-XXGRIINIASVVGLVGNIGQANYSAAKAGVIGLT 187
             VI +NLTG +   +            G I+ ++S  GL    G  +YSA+K G+  LT
Sbjct: 130 DTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASKHGLTALT 189
Query: 188 KTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQP---------- 237
            T+A E     I VN+I P  + + M   +  +   +I  + P   +  P          
Sbjct: 190 NTLAIELGEYGIRVNSIHPYSVETPM---IEPEAMMEIFARHPSFVHSFPPMPVQPNGFM 246
Query: 238 --EEVAGLVEFLALNPAAGYITGQVLTIDGG 266
             +EVA +V +LA +  +G +TG  + +D G
Sbjct: 247 TADEVADVVAWLAGD-GSGTLTGTQIPVDKG 276

>pdb|1O5I|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Reductase (Tm1169) From Thermotoga Maritima At 2.50 A Resolution Length = 249

Iteration: 1
 Score = 93.6 bits (231), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/241 (30%), Positives = 123/241 (51%), Gaps = 22/241 (9%)
Query: 30  VVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEA 89
           +V  ASRGIGRAVA  L + G +V +  AR+    EE+ K    SG + +    D+ K+ 
Sbjct: 23  LVLAASRGIGRAVADVLSQEGAEVTI-CARN----EELLKR---SGHRYVV--CDLRKDL 72
Query: 90  DVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXXXX 149
           D+        +    VDIL+ NAG  +      +    +++ ID     +    +     
Sbjct: 73  DL------LFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPA 126
Query: 150 XXXXXXGRIINIAS--VVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
                 GRI+ I S  V+  + N+  +N  +A+  + G  KT++ E A   I VN +APG
Sbjct: 127 MKEKGWGRIVAITSFSVISPIENLYTSN--SARMALTGFLKTLSFEVAPYGITVNCVAPG 184
Query: 208 FIASDMTAK-LGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGG 266
           +  ++   + L E+ +K++  +IP+ R  +PEE+A +V FL  +  A Y+TGQ + +DGG
Sbjct: 185 WTETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFLC-SEKASYLTGQTIVVDGG 243
Query: 267 M 267
           +
Sbjct: 244 L 244

>pdb|3O38|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 92.8 bits (229), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 97/182 (53%), Gaps = 3/182 (1%)
Query: 84  DVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCT 143
           DV+    V+++I   V+  G +D+L+NNAG+   T ++ M   +W  V+++ LT V   T
Sbjct: 81  DVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRAT 140
Query: 144 QXXXXXXX-XXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
           +            G I+N ASV+G      Q++Y+AAKAGV+ LT+  A E     + +N
Sbjct: 141 RAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAIEAVEFGVRIN 200
Query: 203 AIAPGFIASDMTAKL-GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL 261
           A++P         K    +L  ++      GR  +P EVA  + FLA + ++ Y+TG+V+
Sbjct: 201 AVSPSIARHKFLEKTSSSELLDRLASDEAFGRAAEPWEVAATIAFLASDYSS-YMTGEVV 259
Query: 262 TI 263
           ++
Sbjct: 260 SV 261

>pdb|1P33|A Chain A, Pteridine Reductase From Leishmania Tarentolae Complex With Nadph And Mtx Length = 289

Iteration: 1
 Score = 92.4 bits (228), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/285 (30%), Positives = 127/285 (44%), Gaps = 46/285 (16%)
Query: 26  APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS-GGQALTFGGD 84
           APVA+VTGA++ +G ++A +L   G  V ++Y RS+ +A  +   + A     A+T   D
Sbjct: 7   APVALVTGAAKRLGSSIAEALHAEGYTVCLHYHRSAADASTLAATLNARRPNSAITVQAD 66
Query: 85  VS-------KEAD------VESMIKTAVDA----WGTVDILINNAGITRDTLLMRM---- 123
           +S        E D      + S     VDA    WG  D+L+NNA     T L+R     
Sbjct: 67  LSNVATASFSETDGSVPVTLFSRCSALVDACYMHWGRCDVLVNNASSFYPTPLLRKDAGE 126
Query: 124 -------KKSQWQDVIDL----NLTGVFLCTQXXXXXXXXXXXGR-----IINIASVVGL 167
                  K+S      DL     +   FL               R     I+N+   +  
Sbjct: 127 GGSSVGDKESLEVAAADLFGSNAIAPYFLIKAFAQRVADTRAEQRGTSYSIVNMVDAMTS 186
Query: 168 VGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGF--IASDMTAKLGEDLEKKI 225
              +G   Y+ AK  + GLT++ A E AS  I VN ++PG   +  DM   + ED  +  
Sbjct: 187 QPLLGYTMYTMAKEALEGLTRSAALELASLQIRVNGVSPGLSVLPDDMPFSVQEDYRR-- 244
Query: 226 LEKIPL-GRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 269
             K+PL  R    EEV+ +V FL  +P A YITG  + +DGG  +
Sbjct: 245 --KVPLYQRNSSAEEVSDVVIFLC-SPKAKYITGTCIKVDGGYSL 286

>pdb|3SX2|A Chain A, Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Paratuberculosis In Complex With Nad Length = 278

Iteration: 1
 Score = 91.7 bits (226), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 82/270 (30%), Positives = 123/270 (45%), Gaps = 37/270 (13%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVL----------VNYARSS-KEAEEVCKEIEASGG 76
           VA +TGA+RG GRA A  L   G  ++          V Y  ++ +E     K +E  G 
Sbjct: 15  VAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGS 74
Query: 77  QALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNL 136
           + +    DV     + + ++  +D  G +DI++ NAGI      M      W DVID+NL
Sbjct: 75  RIVARQADVRDRESLSAALQAGLDELGRLDIVVANAGIAP----MSAGDDGWHDVIDVNL 130
Query: 137 TGVFLCTQXXXXXXXXXXXG-RIINIASVVGLVG----NIGQANYSAAKAGVIGLTKTVA 191
           TGV+   +           G  I+ I+S  GL G    + G   Y AAK GV+GL +  A
Sbjct: 131 TGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKHGVVGLMRVYA 190
Query: 192 KEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPL-----GRYGQ--------PE 238
              A + I VN+I P  + + M   +  +  ++ L K+       G  G         PE
Sbjct: 191 NLLAGQMIRVNSIHPSGVETPM---INNEFTREWLAKMAAATDTPGAMGNAMPVEVLAPE 247
Query: 239 EVAGLVEFLALNPAAGYITGQVLTIDGGMV 268
           +VA  V +L ++  A YITG  L +D G +
Sbjct: 248 DVANAVAWL-VSDQARYITGVTLPVDAGFL 276

>pdb|4IMR|A Chain A, Crystal Structure Of 3-oxoacyl (acyl-carrier-protein) Reductase (target Efi-506442) From Agrobacterium Tumefaciens C58 With Nadp Bound Length = 275

Iteration: 1
 Score = 91.3 bits (225), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 75/242 (30%), Positives = 122/242 (50%), Gaps = 7/242 (2%)
Query: 29  AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKE 88
           A+VTG+SRGIG A+A  L  AG  V+++  +    A  V + I ASGG A    GD+S+ 
Sbjct: 36  ALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAA-VQQRIIASGGTAQELAGDLSEA 94
Query: 89  ADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXXX 148
                +I+ A +A   VDIL+ NA    +  L  +  +     + +NL       Q    
Sbjct: 95  GAGTDLIERA-EAIAPVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALP 153
Query: 149 XXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGF 208
                  GR+++I S+  L        Y+A KA    L ++ A+++A  N+ +N +APG 
Sbjct: 154 KMVARKWGRVVSIGSINQLRPKSVVTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGL 213
Query: 209 IASDMTA-KLGEDLE---KKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTID 264
           + +D  A +  +D E   + +     +GR G+PEE+ G   FLA + A  ++TG+ + + 
Sbjct: 214 VDTDRNADRRAQDPEGWDEYVRTLNWMGRAGRPEEMVGAALFLA-SEACSFMTGETIFLT 272
Query: 265 GG 266
           GG
Sbjct: 273 GG 274

>pdb|2FWM|X Chain X, Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodihydroxy Benzoate Dehydrogenase Length = 250

Iteration: 1
 Score = 90.9 bits (224), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 113/249 (45%), Gaps = 22/249 (8%)
Query: 31  VTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEAD 90
           VTGA +GIG A A +  +AG KV       ++E      E+            DV+  A 
Sbjct: 12  VTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQYPFATEVM-----------DVADAAQ 60
Query: 91  VESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXXXXX 150
           V  + +  +     +D L+N AGI R     ++ K  WQ    +N+ G F   Q      
Sbjct: 61  VAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQF 120
Query: 151 XXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIA 210
                G I+ +AS       IG + Y A+KA +  L  +V  E A   +  N ++PG   
Sbjct: 121 RRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTD 180
Query: 211 SDMTAKL--GEDLEKKILE--------KIPLGRYGQPEEVAGLVEFLALNPAAGYITGQV 260
           +DM   L   +D E++ +          IPLG+  +P+E+A  + FLA + A+ +IT Q 
Sbjct: 181 TDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFLASDLAS-HITLQD 239
Query: 261 LTIDGGMVM 269
           + +DGG  +
Sbjct: 240 IVVDGGSTL 248

>pdb|3AFM|A Chain A, Crystal Structure Of Aldose Reductase A1-R Responsible For Alginate Metabolism Length = 258

Iteration: 1
 Score = 88.6 bits (218), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 118/244 (48%), Gaps = 7/244 (2%)
Query: 30  VVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEA 89
           ++TG+S+GIG A A    +AG KV ++  ++    +E    + A GG A  F  D++   
Sbjct: 11  LITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSE 70
Query: 90  DVESMIKTAVDAWGTVDILINNAG-ITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXXX 148
             + ++   V  +G +D+LINNAG +     L  +  + +  V+D N+  V + T+    
Sbjct: 71  ACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALP 130
Query: 149 XXXXXXXGR-----IINIASVVGLVGNIGQANYSAA-KAGVIGLTKTVAKEYASRNINVN 202
                         +I+  S+ G  G    A    A KA +  + K     +    +  N
Sbjct: 131 HLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFN 190
Query: 203 AIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLT 262
            ++PG + +   A   +D+  +I   IP+GR+G  EE+A    F A + A+GYITGQVL 
Sbjct: 191 IVSPGTVDTAFHADKTQDVRDRISNGIPMGRFGTAEEMAPAFLFFASHLASGYITGQVLD 250
Query: 263 IDGG 266
           I+GG
Sbjct: 251 INGG 254

>pdb|1YDE|A Chain A, Crystal Structure Of Human Retinal Short-Chain DehydrogenaseREDUCTASE 3 Length = 270

Iteration: 1
 Score = 88.6 bits (218), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 69/215 (32%), Positives = 106/215 (49%), Gaps = 19/215 (8%)
Query: 67  VCKEIEASGGQALT--FGG------DVSKEADVESMIKTAVDAWGTVDILINNAGITRDT 118
           +C + E SGG+AL     G      DV++E DV++++   +  +G +D ++NNAG     
Sbjct: 38  ICDKDE-SGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPP 96
Query: 119 LLMRMKKSQ-WQDVIDLNLTGVFLCTQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYS 177
                  +Q ++ +++LNL G +  T+           G +INI+S+VG +G      Y 
Sbjct: 97  QRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ-GNVINISSLVGAIGQAQAVPYV 155
Query: 178 AAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDM---TAKLGEDLEKKILEKI---PL 231
           A K  V  +TK +A + +   + VN I+PG I + +    A L  D    I E +   PL
Sbjct: 156 ATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPL 215
Query: 232 GRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGG 266
           GR GQP EV     FLA    A + TG  L + GG
Sbjct: 216 GRMGQPAEVGAAAVFLASE--ANFCTGIELLVTGG 248

>pdb|3UN1|A Chain A, Crystal Structure Of An Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 260

Iteration: 1
 Score = 88.6 bits (218), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 118/242 (48%), Gaps = 18/242 (7%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           V V+TGAS+GIG  +  +      +V+   +RS K + +   +I        T  GD+SK
Sbjct: 30  VVVITGASQGIGAGLVRAYRDRNYRVVAT-SRSIKPSAD--PDIH-------TVAGDISK 79
Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXX 147
               + +++  ++ +G +D L+NNAG+      +   +  +   + +N+ G F  TQ   
Sbjct: 80  PETADRIVREGIERFGRIDSLVNNAGVFLAKPFVEXTQEDYDHNLGVNVAGFFHITQRAA 139
Query: 148 XXXXXXXXGRIINIASVVGLVGNIG--QANYSAAKAGVIGLTKTVAKEYASRNINVNAIA 205
                   G I++I + +     +G   A  S  K G+  +T+++A E++   + VNA++
Sbjct: 140 AEXLKQGSGHIVSITTSLVDQPXVGXPSALASLTKGGLNAVTRSLAXEFSRSGVRVNAVS 199
Query: 206 PGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDG 265
           PG I    T     +    +    P+GR G+  +V   V +L     AG+ITG++L +DG
Sbjct: 200 PGVI---KTPXHPAETHSTLAGLHPVGRXGEIRDVVDAVLYLE---HAGFITGEILHVDG 253
Query: 266 GM 267
           G 
Sbjct: 254 GQ 255

>pdb|2EHD|A Chain A, Crystal Structure Analysis Of Oxidoreductase Length = 234

Iteration: 1
 Score = 88.2 bits (217), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 89/180 (49%), Gaps = 5/180 (2%)
Query: 30  VVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEA 89
           ++TGASRGIG A A  L   G +V +  AR  K  + +  E+E     AL   GDV +E 
Sbjct: 9   LITGASRGIGEATARLLHAKGYRVGL-MARDEKRLQALAAELEG----ALPLPGDVREEG 63
Query: 90  DVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXXXX 149
           D    +    +A+G +  L+NNAG+     +  +   +W+ V+D NLTG FL  +     
Sbjct: 64  DWARAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPA 123
Query: 150 XXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFI 209
                 G I+N+ S+ G     G A Y+A+K G++GL      +    N+ V  + PG +
Sbjct: 124 LLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSV 183

>pdb|3GED|A Chain A, Fingerprint And Structural Analysis Of A Apo Scor Enzyme From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 117/245 (47%), Gaps = 28/245 (11%)
Query: 30  VVTGASRGIGRAVATSLGKAG---CKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVS 86
           +VTG   GIG+ +     +AG   C + ++  RS+  A+E              F GDV+
Sbjct: 6   IVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKE--------RPNLFYFHGDVA 57
Query: 87  KEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVF----LC 142
               ++  ++ A++    +D+L+NNA      +L  +   ++  ++ + L   +    LC
Sbjct: 58  DPLTLKKFVEYAMEKLQRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLC 117
Query: 143 TQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
                        GRIINIAS            Y++AK G++ LT  +A      ++ VN
Sbjct: 118 RDELIKNK-----GRIINIASTRAFQSEPDSEAYASAKGGIVALTHALAMSLGP-DVLVN 171
Query: 203 AIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLT 262
            IAPG+I  ++T +  ++  ++    IP G+ G P++++ +V FL       +ITG+ + 
Sbjct: 172 CIAPGWI--NVTEQ--QEFTQEDCAAIPAGKVGTPKDISNMVLFLC---QQDFITGETII 224
Query: 263 IDGGM 267
           +DGGM
Sbjct: 225 VDGGM 229

>pdb|3UWR|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Strain 104 Length = 286

Iteration: 1
 Score = 86.3 bits (212), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/271 (28%), Positives = 129/271 (47%), Gaps = 31/271 (11%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVL----------VNYARSSKE-AEEVCKEIEASGG 76
           VA ++GA+RG GR+ A  L + G  ++          + Y  S+ E   E    ++    
Sbjct: 17  VAFISGAARGQGRSHAVRLAQEGADIIAIDICGPIENLAYPHSTPEDLAETADLVKDLDR 76
Query: 77  QALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRD-TLLMRMKKSQWQDVIDLN 135
           + +T   DV     ++S + + V+  G +DI++ NAG+  D   L +++ + WQD+ID+N
Sbjct: 77  RIVTAQVDVRDFEALKSAVDSGVEQLGRLDIIVANAGVGTDGRKLHKIRDNVWQDMIDIN 136
Query: 136 LTGVFLCTQXXXXXXXXXXXG-RIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEY 194
           LTGV+   +           G  I+  +SV G        +Y AAK GVIGL +  A E 
Sbjct: 137 LTGVWHTVKAGVPHVLSGGRGGSIVLTSSVGGRKAYPNTGHYIAAKHGVIGLMRAFAVEL 196
Query: 195 ASRNINVNAIAP-----GFIASDMTAKLGE-DLE----------KKILEKIPLGRYGQPE 238
               I VNA+ P       + +D T +L   DLE           +++  +P+  +    
Sbjct: 197 GPHMIRVNAVLPTQVSTTMVMNDQTFRLFRPDLENPGPDDFAPISQMMHTLPV-PWVDAS 255
Query: 239 EVAGLVEFLALNPAAGYITGQVLTIDGGMVM 269
           +++  V FLA +  + Y+TG  L +D G ++
Sbjct: 256 DISNAVLFLASD-ESRYVTGVSLPVDAGSLL 285

>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase Type1, Complexed With Nad+ Length = 267

Iteration: 1
 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 122/258 (47%), Gaps = 32/258 (12%)
Query: 21  AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKV-LVNYARSSKEAEEVCK---EIEASGG 76
           A  V   VA+VTGA++GIGRA A +L   G KV LV++   + EA   CK     +    
Sbjct: 2   AHMVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDW---NLEAGVQCKAALHEQFEPQ 58
Query: 77  QALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNL 136
           + L    DV+ +  +    +  VD +G +DIL+NNAG+  +          W+  + +NL
Sbjct: 59  KTLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVNNE--------KNWEKTLQINL 110
Query: 137 TGVFLCTQXXXXXXXXXXXGR---IINIASVVGLVGNIGQANYSAAKAGVIGLTKT--VA 191
             V   T            G    IIN++S+ GL+    Q  Y A+K G++G T++  +A
Sbjct: 111 VSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALA 170
Query: 192 KEYASRNINVNAIAPGFIAS------DMTAKLGEDLEKKILEKIPLGRYG--QPEEVAG- 242
               +  + +NAI PGF+ +      +    +G+ +E K   K  +  YG   P  +A  
Sbjct: 171 ANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANG 230
Query: 243 ---LVEFLALNPAAGYIT 257
              L+E  ALN A   IT
Sbjct: 231 LITLIEDDALNGAIMKIT 248

>pdb|1CYD|A Chain A, Carbonyl Reductase Complexed With Nadph And 2-Propanol Length = 244

Iteration: 1
 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 110/250 (44%), Gaps = 31/250 (12%)
Query: 29  AVVTGASRGIGRAVATSLGKAGCKV---------LVNYARSSKEAEEVCKEIEASGGQAL 79
           A+VTGA +GIGR    +L  +G KV         LV+ A+     E VC ++        
Sbjct: 10  ALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEK 69
Query: 80  TFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGV 139
             GG                   G VD+L+NNA +      + + K  +     +NL  V
Sbjct: 70  ALGG------------------IGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSV 111
Query: 140 FLCTQXXXXXXXXX-XXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRN 198
           F  +Q            G I+N++S+V  V       YS+ K  +  LTK +A E     
Sbjct: 112 FQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHK 171
Query: 199 INVNAIAPGFIASDMTAKLGEDLE--KKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYI 256
           I VN++ P  + +DM  K+  D E  +K+ E+ PL ++ + E+V   + FL  + +A   
Sbjct: 172 IRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSASTS 231
Query: 257 TGQVLTIDGG 266
            G +L +D G
Sbjct: 232 GGGIL-VDAG 240

>pdb|3UVE|A Chain A, Crystal Structure Of Carveol Dehydrogenase ((+)-Trans-Carveol Dehydrogenase) From Mycobacterium Avium Length = 286

Iteration: 1
 Score = 85.5 bits (210), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 124/280 (44%), Gaps = 37/280 (13%)
Query: 24  VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGG 83
           VE  VA VTGA+RG GR+ A  L + G  ++         A  V   I AS  + L    
Sbjct: 9   VEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETA 68
Query: 84  D---------VSKEADVESM--IKTAVDA----WGTVDILINNAGITR--DTLLMRMKKS 126
           D         V+ E DV     +K AVD+     G +DI++ NAGI    DTL  +  + 
Sbjct: 69  DLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTL-DKTSEE 127
Query: 127 QWQDVIDLNLTGVFLCTQXXXXXXXXXXXG-RIINIASVVGLVGNIGQANYSAAKAGVIG 185
            W ++ID+NL GV+   +           G  II  +SV GL       +Y AAK GV+G
Sbjct: 128 DWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKHGVVG 187
Query: 186 LTKTVAKEYASRNINVNAIAPGFIASDMTAKLG------EDLEK----------KILEKI 229
           L +    E     I VN++ P  + + M    G       DLE           ++   +
Sbjct: 188 LMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMFHTL 247
Query: 230 PLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 269
           P+  + +P +++  V F A +  A YITG  L ID G  +
Sbjct: 248 PI-PWVEPIDISNAVLFFASD-EARYITGVTLPIDAGSCL 285

>pdb|4DA9|A Chain A, Crystal Structure Of Putative Short-Chain DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 85.1 bits (209), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 119/248 (47%), Gaps = 9/248 (3%)
Query: 27  PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVS 86
           PVA+VTG  RGIG  +A +L  +G  + +     ++    V  E+   G + +    D++
Sbjct: 30  PVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLA 89
Query: 87  KEADVESMIKTAVDAWGTVDILINNAG---ITRDTLLMRMKKSQWQDVIDLNLTGVFLCT 143
             +  ++ +   V  +G +D L+NNAG   I RD  L  +K   +  ++ +NL G    T
Sbjct: 90  DLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFL-DLKPENFDTIVGVNLRGTVFFT 148
Query: 144 QX---XXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNIN 200
           Q                IINI SV  +  +  + +Y  +KAG+   ++ +A   A   I 
Sbjct: 149 QAVLKAXLASDARASRSIINITSVSAVXTSPERLDYCXSKAGLAAFSQGLALRLAETGIA 208
Query: 201 VNAIAPGFIASDMTAKLGEDLEKKILEK-IPLGRYGQPEEVAGLVEFLALNPAAGYITGQ 259
           V  + PG I SD TA +    +  I    +P  R+G+PE++  +V  LA     G+ TG 
Sbjct: 209 VFEVRPGIIRSDXTAAVSGKYDGLIESGLVPXRRWGEPEDIGNIVAGLA-GGQFGFATGS 267
Query: 260 VLTIDGGM 267
           V+  DGG+
Sbjct: 268 VIQADGGL 275

>pdb|3UXY|A Chain A, The Crystal Structure Of Short Chain Dehydrogenase From Rhodobacter Sphaeroides Length = 266

Iteration: 1
 Score = 84.3 bits (207), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 95/195 (48%), Gaps = 8/195 (4%)
Query: 79  LTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTG 138
           L   GD+ + A  + +        G +DI++NNAG+     +     + W   + +N+  
Sbjct: 69  LHLPGDLREAAYADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEA 128
Query: 139 VFLCTQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRN 198
            F   +           G I+N+AS  GL    G A Y   KA +  LT+    ++A + 
Sbjct: 129 PFRICRAAIPLXAAAGGGAIVNVASCWGLRPGPGHALYCLTKAALASLTQCXGXDHAPQG 188
Query: 199 INVNAIAPGFIASDMT----AKLGEDLEKKILE---KIPLGRYGQPEEVAGLVEFLALNP 251
           I +NA+ P  + +       AK G D ++ + E    +PLGR  +PE++A +V FLA + 
Sbjct: 189 IRINAVCPNEVNTPXLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADVVLFLASD- 247
Query: 252 AAGYITGQVLTIDGG 266
           AA Y+ G ++ ++GG
Sbjct: 248 AARYLCGSLVEVNGG 262

>pdb|2Y93|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3- Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain B-356. Length = 281

Iteration: 1
 Score = 84.0 bits (206), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 117/256 (45%), Gaps = 23/256 (8%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIE-ASGGQALTFGGDVS 86
           VA++TG + G+GRA+       G +V V      K AE + +E+E A GG A+   GDV 
Sbjct: 7   VALITGGASGLGRALVDRFVAEGARVAV----LDKSAERL-RELEVAHGGNAVGVVGDVR 61
Query: 87  KEADVESMIKTAVDAWGTVDILINNAGI-TRDTLLMRMKKSQ----WQDVIDLNLTGVFL 141
              D +   +  + A+G +D LI NAGI    T L  + + +    + D+  +N+ G ++
Sbjct: 62  SLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKG-YI 120
Query: 142 CTQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINV 201
                         G ++   S  G   N G   Y+A K  V+GL + +A E A  ++ V
Sbjct: 121 HAVKACLPALVSSRGSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQMAFELAP-HVRV 179
Query: 202 NAIAPGFIASDMTAKLGEDLEKKILEKIPL----------GRYGQPEEVAGLVEFLALNP 251
           N +APG + +D+       L ++ +  +PL          GR    EE  G   F A   
Sbjct: 180 NGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEYTGAYVFFATRG 239
Query: 252 AAGYITGQVLTIDGGM 267
            +   TG +L  DGGM
Sbjct: 240 DSLPATGALLNYDGGM 255

>pdb|3UCX|A Chain A, The Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 264

Iteration: 1
 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 117/251 (46%), Gaps = 15/251 (5%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           V V++G    +G  +A    + G   LV  AR+ +  E+V K++  +G +AL+ G D++ 
Sbjct: 13  VVVISGVGPALGTTLARRCAEQGAD-LVLAARTVERLEDVAKQVTDTGRRALSVGTDITD 71
Query: 88  EADVESMIKTAVDAWGTVDILINNA-GITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXX 146
           +A V  ++   + A+G VD++INNA  +              +D I+L + G     Q  
Sbjct: 72  DAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQ-G 130
Query: 147 XXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
                    G ++N+ S+V          Y  AK+ ++ +++T+A E   + I VN++ P
Sbjct: 131 FTPALEESKGAVVNVNSMVVRHSQAKYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLP 190
Query: 207 GFI--------ASDMTAKLG---EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGY 255
           G+I              K G   ED+         L R    +EVA  + F+A + A+G 
Sbjct: 191 GYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASAILFMASDLASG- 249
Query: 256 ITGQVLTIDGG 266
           ITGQ L ++ G
Sbjct: 250 ITGQALDVNCG 260

>pdb|3PPI|A Chain A, Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenase Type-2 From Mycobacterium Avium Length = 281

Iteration: 1
 Score = 82.8 bits (203), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 53/145 (36%), Positives = 72/145 (49%), Gaps = 10/145 (6%)
Query: 128 WQDVIDLNLTGVFLCTQXXXXXXXXXX------XGRIINIASVVGLVGNIGQANYSAAKA 181
           +   IDL L G +   +                 G ++  AS+ G  G IGQ  Y+AAKA
Sbjct: 133 FTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQTAYAAAKA 192
Query: 182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLG-RYGQPEEV 240
           GVIGLT   A++ +S  I VN IAPG + + +   +GE+   K    IP   R G P+E 
Sbjct: 193 GVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVGEEALAKFAANIPFPKRLGTPDEF 252
Query: 241 AGLVEFLALNPAAGYITGQVLTIDG 265
           A    FL  N   GYI G+V+ +DG
Sbjct: 253 ADAAAFLLTN---GYINGEVMRLDG 274

>pdb|2AG5|A Chain A, Crystal Structure Of Human Dhrs6 Length = 246

Iteration: 1
 Score = 82.8 bits (203), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 87/172 (50%), Gaps = 14/172 (8%)
Query: 105 VDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXXXXXXXXXXGRIINIASV 164
           +D+L N AG      ++  ++  W   ++LN+  ++L  +           G IIN++SV
Sbjct: 75  LDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSV 134
Query: 165 VGLV-GNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEK 223
              V G + +  YS  KA VIGLTK+VA ++  + I  N + PG +    T  L E ++ 
Sbjct: 135 ASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVD---TPSLQERIQA 191
Query: 224 K---------ILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGG 266
           +          L++   GR+   EE+A L  +LA + +A Y+TG  + IDGG
Sbjct: 192 RGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESA-YVTGNPVIIDGG 242

>pdb|3TPC|A Chain A, Crystal Structure Of A Hypothtical Protein Sma1452 From Sinorhizobium Meliloti 1021 Length = 257

Iteration: 1
 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 79/252 (31%), Positives = 113/252 (44%), Gaps = 20/252 (7%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTF-GGDVS 86
           V +VTGAS G+G AV   L + G  VL          EE   E+    G A+ F   DV+
Sbjct: 9   VFIVTGASSGLGAAVTRXLAQEGATVL-GLDLKPPAGEEPAAEL----GAAVRFRNADVT 63
Query: 87  KEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQD----VIDLNLTGVFLC 142
            EAD  + +  A   +G V  L+N AG      ++        D     + +NL G F  
Sbjct: 64  NEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNX 123
Query: 143 TQXXXXXXXXXXX------GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYAS 196
            +                 G I+N AS+    G IGQA Y+A+K GV  LT   A+E A 
Sbjct: 124 IRLAAEVXSQGEPDADGERGVIVNTASIAAFDGQIGQAAYAASKGGVAALTLPAARELAR 183
Query: 197 RNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPL-GRYGQPEEVAGLVEFLALNPAAGY 255
             I V  IAPG   +   A   +D++  +   +P   R G+ EE A LV+ +  N     
Sbjct: 184 FGIRVVTIAPGIFDTPXXAGXPQDVQDALAASVPFPPRLGRAEEYAALVKHICEN---TX 240
Query: 256 ITGQVLTIDGGM 267
           + G+V+ +DG +
Sbjct: 241 LNGEVIRLDGAL 252

>pdb|4FGS|A Chain A, Crystal Structure Of A Probable Dehydrogenase Protein Length = 273

Iteration: 1
 Score = 81.6 bits (200), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 113/252 (44%), Gaps = 14/252 (5%)
Query: 22  QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTF 81
           Q + A +AV+TGA+ GIG A A      G +V +   R     +    EI   GG A+  
Sbjct: 25  QRLNAKIAVITGATSGIGLAAAKRFVAEGARVFIT-GRRKDVLDAAIAEI---GGGAVGI 80
Query: 82  GGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFL 141
             D +  A+++ + +      G +D+L  NAG      L  + + Q+ D  D N+ GV  
Sbjct: 81  QADSANLAELDRLYEKVKAEAGRIDVLFVNAGGGSXLPLGEVTEEQYDDTFDRNVKGVLF 140
Query: 142 CTQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINV 201
             Q             ++   S  G  G    + Y+A+KA +    +    +   R I +
Sbjct: 141 TVQKALPLLARGSS--VVLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDLKDRGIRI 198
Query: 202 NAIAPGFIASDMTAKL-GED------LEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAG 254
           N ++PG   +    +L G+D      L   +  ++P GR G+ EEVA    FLA + ++ 
Sbjct: 199 NTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPXGRVGRAEEVAAAALFLASDDSS- 257
Query: 255 YITGQVLTIDGG 266
           ++TG  L +DGG
Sbjct: 258 FVTGAELFVDGG 269

>pdb|1PR9|A Chain A, Human L-Xylulose Reductase Holoenzyme Length = 244

Iteration: 1
 Score = 81.3 bits (199), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 109/241 (45%), Gaps = 13/241 (5%)
Query: 30  VVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEA 89
           +VTGA +GIGR    +L   G +V V  +R+  + + + +E        +  G       
Sbjct: 11  LVTGAGKGIGRGTVQALHATGARV-VAVSRTQADLDSLVRECPGIEPVCVDLG------- 62
Query: 90  DVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXXXX 149
           D E+  + A+ + G VD+L+NNA +      + + K  +    ++NL  V   +Q     
Sbjct: 63  DWEA-TERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARG 121
Query: 150 XXXX-XXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGF 208
                  G I+N++S          + Y + K  +  LTK +A E     I VNA+ P  
Sbjct: 122 LIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTV 181
Query: 209 IASDMTAKLGEDLE--KKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGG 266
           + + M      D    K +L +IPLG++ + E V   + FL L+  +G  TG  L ++GG
Sbjct: 182 VMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFL-LSDRSGMTTGSTLPVEGG 240
Query: 267 M 267
Sbjct: 241 F 241

>pdb|3D3W|A Chain A, Structure Of L-Xylulose Reductase With Bound Coenzyme, Phosphate And Hydroxide Length = 244

Iteration: 1
 Score = 81.3 bits (199), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 109/241 (45%), Gaps = 13/241 (5%)
Query: 30  VVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEA 89
           +VTGA +GIGR    +L   G +V V  +R+  + + + +E        +  G       
Sbjct: 11  LVTGAGKGIGRGTVQALHATGARV-VAVSRTQADLDSLVRECPGIEPVCVDLG------- 62
Query: 90  DVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXXXX 149
           D E+  + A+ + G VD+L+NNA +      + + K  +    ++NL  V   +Q     
Sbjct: 63  DWEA-TERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARG 121
Query: 150 XXXX-XXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGF 208
                  G I+N++S          + Y + K  +  LTK +A E     I VNA+ P  
Sbjct: 122 LIARGVPGAIVNVSSQXSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTV 181
Query: 209 IASDMTAKLGEDLE--KKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGG 266
           + + M      D    K +L +IPLG++ + E V   + FL L+  +G  TG  L ++GG
Sbjct: 182 VMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFL-LSDRSGMTTGSTLPVEGG 240
Query: 267 M 267
Sbjct: 241 F 241

>pdb|3TJR|A Chain A, Crystal Structure Of A Rv0851c Ortholog Short Chain Dehydrogenase From Mycobacterium Paratuberculosis Length = 301

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 87/182 (47%), Gaps = 8/182 (4%)
Query: 29  AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKE 88
           AVVTG + GIG A AT   + G ++++    S  +   + + +    GQ     G V   
Sbjct: 34  AVVTGGASGIGLATATEFARRGARLVL----SDVDQPALEQAVNGLRGQGFDAHGVVCDV 89
Query: 89  ADVESMIKTAVDAW---GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQX 145
             ++ M++ A +A+   G VD++ +NAGI     L +M    W+ VID++L G     + 
Sbjct: 90  RHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEA 149
Query: 146 XXXXXXXXXXG-RIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAI 204
                     G  I   AS  GLV N G   Y  AK GV+GL +T+A+E     I V+ +
Sbjct: 150 FLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVL 209
Query: 205 AP 206
            P
Sbjct: 210 CP 211

>pdb|2QQ5|A Chain A, Crystal Structure Of Human Sdr Family Member 1 Length = 260

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 118/250 (47%), Gaps = 21/250 (8%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           V VVTGASRGIGR +A  L KAG  V +   R       V +E ++ GGQ +    D S+
Sbjct: 7   VCVVTGASRGIGRGIALQLCKAGATVYIT-GRHLDTLRVVAQEAQSLGGQCVPVVCDSSQ 65
Query: 88  EADVESMIKTA-VDAWGTVDILINN--AGI-----TRDTLLMRMKKSQWQDVIDLNLTGV 139
           E++V S+ +    +  G +D+L+NN  AG+     TR+        S W D+ ++ L G 
Sbjct: 66  ESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGH 125
Query: 140 FLCTQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNI 199
           + C+            G I+ I+S  G +  +    Y   KA    L    A E     +
Sbjct: 126 YFCSVYGARLMVPAGQGLIVVISS-PGSLQYMFNVPYGVGKAACDKLAADCAHELRRHGV 184
Query: 200 NVNAIAPGFIASDMTAKLGEDLEK-KILEKIPLGRY------GQPEEVAG-LVEFLALNP 251
           +  ++ PG + +++   L E + K ++L+   L ++       +  E++G  V  LA +P
Sbjct: 185 SCVSLWPGIVQTEL---LKEHMAKEEVLQDPVLKQFKSAFSSAETTELSGKCVVALATDP 241
Query: 252 AAGYITGQVL 261
               ++G+VL
Sbjct: 242 NILSLSGKVL 251

>pdb|1UAY|A Chain A, Crystal Structure Of Type Ii 3-Hydroxyacyl-Coa Dehydrogenase From Thermus Thermophilus Hb8 Length = 242

Iteration: 1
 Score = 79.0 bits (193), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 100/214 (46%), Gaps = 15/214 (7%)
Query: 67  VCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKS 126
           V  ++   G   +   GDV++E DV   +  A +    +  +++ AG+     ++  +  
Sbjct: 30  VVLDLRREGEDLIYVEGDVTREEDVRRAVARAQEE-APLFAVVSAAGVGLAEKILGKEGP 88
Query: 127 Q----WQDVIDLNLTGVFLCTQXXX------XXXXXXXXGRIINIASVVGLVGNIGQANY 176
                ++ V+++NL G F   +                 G I+N ASV    G IGQA Y
Sbjct: 89  HGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAY 148
Query: 177 SAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPL-GRYG 235
           +A+K GV+ LT   A+E A   I V  +APG   + +   L E  +  +  ++P   R G
Sbjct: 149 AASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFPPRLG 208
Query: 236 QPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 269
           +PEE A LV  +  NP    + G+V+ +DG + M
Sbjct: 209 RPEEYAALVLHILENP---MLNGEVVRLDGALRM 239

>pdb|4DYV|A Chain A, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE SDR FROM Xanthobacter Autotrophicus Py2 Length = 272

Iteration: 1
 Score = 78.6 bits (192), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 62/167 (37%), Positives = 84/167 (50%), Gaps = 7/167 (4%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           +A+VTGA  G+GRAVA +L  AG  V +   R     +E   EI   G  AL    DV+ 
Sbjct: 30  IAIVTGAGSGVGRAVAVALAGAGYGVALA-GRRLDALQETAAEI---GDDALCVPTDVTD 85
Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMR-MKKSQWQDVIDLNLTGVFLCTQXX 146
              V ++    V+ +G VD+L NNAG     +    +  +QW+ V+D NLTG FLCTQ  
Sbjct: 86  PDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPXEDLTFAQWKQVVDTNLTGPFLCTQEA 145
Query: 147 XXXXXXXXX--GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVA 191
                      GRIIN  S+         A Y+A K  + GLTK+ +
Sbjct: 146 FRVXKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAITGLTKSTS 192

>pdb|1W0C|A Chain A, Inhibition Of Leishmania Major Pteridine Reductase (Ptr1) By 2,4,6-Triaminoquinazoline; Structure Of The Nadp Ternary Complex. Length = 307

Iteration: 1
 Score = 78.2 bits (191), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 77/286 (26%), Positives = 118/286 (41%), Gaps = 50/286 (17%)
Query: 27  PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEA-SGGQALTFGGDV 85
           PVA+VTGA++ +GR++A  L   G  V ++Y RS+ EA  +   + A     A+T   D+
Sbjct: 26  PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADL 85
Query: 86  SKEADVE-----------------SMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQW 128
           S  A                     ++      WG  D+L+NNA     T L+R  +   
Sbjct: 86  SNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGH 145
Query: 129 QDVI-----------DL----NLTGVFLCTQXXXXXXXXXXXGR-----IINIASVVGLV 168
           +  +           DL     +   FL               R     IIN+   +   
Sbjct: 146 EPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQ 205
Query: 169 GNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILE- 227
             +G   Y+ AK  + GLT++ A E A   I VN + PG       + L +D+   + E 
Sbjct: 206 PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGL------SVLVDDMPPAVWEG 259
Query: 228 ---KIPL-GRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 269
              K+PL  R     EV+ +V FL  +  A YITG  + +DGG  +
Sbjct: 260 HRSKVPLYQRDSSAAEVSDVVIFLC-SSKAKYITGTCVKVDGGYSL 304

>pdb|4ESO|A Chain A, Crystal Structure Of A Putative Oxidoreductase Protein From Sinorhizobium Meliloti 1021 In Complex With Nadp Length = 255

Iteration: 1
 Score = 78.2 bits (191), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 110/251 (43%), Gaps = 14/251 (5%)
Query: 23  NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFG 82
           N +   A+V G + G G A    L + G +VL+    + +    + +  E  G +     
Sbjct: 5   NYQGKKAIVIGGTHGXGLATVRRLVEGGAEVLL----TGRNESNIARIREEFGPRVHALR 60
Query: 83  GDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLC 142
            D++   ++  +   A    G +D+L  NAG++      ++ ++ +     +N  G F  
Sbjct: 61  SDIADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFT 120
Query: 143 TQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
            Q           G I+  +SV    G+ G + YSA+KA ++     +A E   R I VN
Sbjct: 121 VQRLTPLIREG--GSIVFTSSVADEGGHPGXSVYSASKAALVSFASVLAAELLPRGIRVN 178
Query: 203 AIAPGFIASDMTAKLG----EDLEKKILEK--IPLGRYGQPEEVAGLVEFLALNPAAGYI 256
           +++PGFI +      G    E  E K L     P  R G  +EVA  V FLA    A + 
Sbjct: 179 SVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPXKRNGTADEVARAVLFLAFE--ATFT 236
Query: 257 TGQVLTIDGGM 267
           TG  L +DGG+
Sbjct: 237 TGAKLAVDGGL 247

>pdb|3VC7|A Chain A, Crystal Structure Of A Putative Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 254

Iteration: 1
 Score = 78.2 bits (191), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 110/251 (43%), Gaps = 14/251 (5%)
Query: 23  NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFG 82
           N +   A+V G + G G A    L + G +VL+    + +    + +  E  G +     
Sbjct: 4   NYQGKKAIVIGGTHGXGLATVRRLVEGGAEVLL----TGRNESNIARIREEFGPRVHALR 59
Query: 83  GDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLC 142
            D++   ++  +   A    G +D+L  NAG++      ++ ++ +     +N  G F  
Sbjct: 60  SDIADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFT 119
Query: 143 TQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
            Q           G I+  +SV    G+ G + YSA+KA ++     +A E   R I VN
Sbjct: 120 VQRLTPLIREG--GSIVFTSSVADEGGHPGXSVYSASKAALVSFASVLAAELLPRGIRVN 177
Query: 203 AIAPGFIASDMTAKLG----EDLEKKILEK--IPLGRYGQPEEVAGLVEFLALNPAAGYI 256
           +++PGFI +      G    E  E K L     P  R G  +EVA  V FLA    A + 
Sbjct: 178 SVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPXKRNGTADEVARAVLFLAFE--ATFT 235
Query: 257 TGQVLTIDGGM 267
           TG  L +DGG+
Sbjct: 236 TGAKLAVDGGL 246

>pdb|1E92|A Chain A, Pteridine Reductase 1 From Leishmania Major Complexed With Nadp+ And Dihydrobiopterin Length = 288

Iteration: 1
 Score = 78.2 bits (191), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 77/286 (26%), Positives = 118/286 (41%), Gaps = 50/286 (17%)
Query: 27  PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEA-SGGQALTFGGDV 85
           PVA+VTGA++ +GR++A  L   G  V ++Y RS+ EA  +   + A     A+T   D+
Sbjct: 7   PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADL 66
Query: 86  SKEADVE-----------------SMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQW 128
           S  A                     ++      WG  D+L+NNA     T L+R  +   
Sbjct: 67  SNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGH 126
Query: 129 QDVI-----------DL----NLTGVFLCTQXXXXXXXXXXXGR-----IINIASVVGLV 168
           +  +           DL     +   FL               R     IIN+   +   
Sbjct: 127 EPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQ 186
Query: 169 GNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILE- 227
             +G   Y+ AK  + GLT++ A E A   I VN + PG       + L +D+   + E 
Sbjct: 187 PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGL------SVLVDDMPPAVWEG 240
Query: 228 ---KIPL-GRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 269
              K+PL  R     EV+ +V FL  +  A YITG  + +DGG  +
Sbjct: 241 HRSKVPLYQRDSSAAEVSDVVIFLC-SSKAKYITGTCVKVDGGYSL 285

>pdb|1E7W|A Chain A, One Active Site, Two Modes Of Reduction Correlate The Mechanism Of Leishmania Pteridine Reductase With Pterin Metabolism And Antifolate Drug Resistance In Trpanosomes Length = 291

Iteration: 1
 Score = 78.2 bits (191), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 77/286 (26%), Positives = 118/286 (41%), Gaps = 50/286 (17%)
Query: 27  PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEA-SGGQALTFGGDV 85
           PVA+VTGA++ +GR++A  L   G  V ++Y RS+ EA  +   + A     A+T   D+
Sbjct: 10  PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADL 69
Query: 86  SKEADVE-----------------SMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQW 128
           S  A                     ++      WG  D+L+NNA     T L+R  +   
Sbjct: 70  SNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGH 129
Query: 129 QDVI-----------DL----NLTGVFLCTQXXXXXXXXXXXGR-----IINIASVVGLV 168
           +  +           DL     +   FL               R     IIN+   +   
Sbjct: 130 EPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQ 189
Query: 169 GNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILE- 227
             +G   Y+ AK  + GLT++ A E A   I VN + PG       + L +D+   + E 
Sbjct: 190 PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGL------SVLVDDMPPAVWEG 243
Query: 228 ---KIPL-GRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 269
              K+PL  R     EV+ +V FL  +  A YITG  + +DGG  +
Sbjct: 244 HRSKVPLYQRDSSAAEVSDVVIFLC-SSKAKYITGTCVKVDGGYSL 288

>pdb|2QHX|A Chain A, Structure Of Pteridine Reductase From Leishmania Major Complexed With A Ligand Length = 328

Iteration: 1
 Score = 77.8 bits (190), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 77/286 (26%), Positives = 118/286 (41%), Gaps = 50/286 (17%)
Query: 27  PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEA-SGGQALTFGGDV 85
           PVA+VTGA++ +GR++A  L   G  V ++Y RS+ EA  +   + A     A+T   D+
Sbjct: 47  PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADL 106
Query: 86  SKEADVE-----------------SMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQW 128
           S  A                     ++      WG  D+L+NNA     T L+R  +   
Sbjct: 107 SNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGH 166
Query: 129 QDVI-----------DL----NLTGVFLCTQXXXXXXXXXXXGR-----IINIASVVGLV 168
           +  +           DL     +   FL               R     IIN+   +   
Sbjct: 167 EPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQ 226
Query: 169 GNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILE- 227
             +G   Y+ AK  + GLT++ A E A   I VN + PG       + L +D+   + E 
Sbjct: 227 PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGL------SVLVDDMPPAVWEG 280
Query: 228 ---KIPL-GRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 269
              K+PL  R     EV+ +V FL  +  A YITG  + +DGG  +
Sbjct: 281 HRSKVPLYQRDSSAAEVSDVVIFLC-SSKAKYITGTCVKVDGGYSL 325

>pdb|3F5Q|A Chain A, Crystal Structure Of Putative Short Chain Dehydrogenase From Escherichia Coli Cft073 Length = 262

Iteration: 1
 Score = 77.8 bits (190), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 92/192 (47%), Gaps = 6/192 (3%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEI-EASGGQALTFGGDV- 85
           + +VTGAS GIGR  A +  + G  V++   R+ ++  +V   I E +G Q   F  D+ 
Sbjct: 16  IILVTGASDGIGREAAMTYARYGATVIL-LGRNEEKLRQVASHINEETGRQPQWFILDLL 74
Query: 86  -SKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQ-WQDVIDLNLTGVFLCT 143
                D + + +     +  +D +++NAG+  D   M  +  Q WQDV+ +N+   F+ T
Sbjct: 75  TCTSEDCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQDPQVWQDVMQVNVNATFMLT 134
Query: 144 QXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNA 203
           Q           G ++  +S VG  G      Y+A+K    G+ + +A EY  R + VN 
Sbjct: 135 QALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEYQQR-LRVNC 193
Query: 204 IAPGFIASDMTA 215
           I PG   + M A
Sbjct: 194 INPGGTRTAMRA 205

>pdb|3F5S|A Chain A, Crystal Structure Of Putatitve Short Chain Dehydrogenase From Shigella Flexneri 2a Str. 301 Length = 255

Iteration: 1
 Score = 77.8 bits (190), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 93/192 (48%), Gaps = 6/192 (3%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEI-EASGGQALTFGGDV- 85
           + +VTGAS GIGR  A +  + G  V++   R+ ++  +V   I E +G Q   F  D+ 
Sbjct: 12  IILVTGASDGIGREAAMTYARYGATVIL-LGRNEEKLRQVASHINEETGRQPQWFILDLL 70
Query: 86  -SKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQ-WQDVIDLNLTGVFLCT 143
                + + + +  V  +  +D +++NAG+  D   M  +  Q WQDV+ +N+   F+ T
Sbjct: 71  TCTSENCQQLAQRIVVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQINVNATFMLT 130
Query: 144 QXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNA 203
           Q           G ++  +S VG  G      Y+A+K    G+ + +A EY  R + VN 
Sbjct: 131 QALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEYQQR-LRVNC 189
Query: 204 IAPGFIASDMTA 215
           I PG   + M A
Sbjct: 190 INPGGTRTAMRA 201

>pdb|2JAP|A Chain A, Clavulanic Acid Dehydrogenase: Structural And Biochemical Analysis Of The Final Step In The Biosynthesis Of The Beta- Lactamase Inhibitor Clavulanic Acid Length = 247

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 109/229 (47%), Gaps = 3/229 (1%)
Query: 24  VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGG 83
           ++  VA++TGAS GIG A A +L   G  V +   R  K    +  E+ A+G +      
Sbjct: 5   LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEK-LRALGDELTAAGAKVHVLEL 63
Query: 84  DVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCT 143
           DV+    V++ + + V+A G +DIL+NNAGI     +     + W  +ID NL G+   T
Sbjct: 64  DVADRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMT 123
Query: 144 QXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNA 203
           +           G ++ ++S+ G V     A Y A K GV   ++T+ +E   R + V  
Sbjct: 124 RAALPHLLRSK-GTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTERGVRVVV 182
Query: 204 IAPGFIASDMTAKLGEDLEKKILE-KIPLGRYGQPEEVAGLVEFLALNP 251
           I PG   +++   +     K++ E +I   R  Q +++A  V +    P
Sbjct: 183 IEPGTTDTELRGHITHTATKEMYEQRISQIRKLQAQDIAEAVRYAVTAP 231

>pdb|3LF1|A Chain A, Apo Structure Of The Short Chain Oxidoreductase Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An Atypical Catalytic Center Length = 265

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 105/260 (40%), Gaps = 28/260 (10%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKE--AEEVCKEIEASGGQALTFGGDV 85
           VAVVTG S GIG A    L +AG  V    AR  +   A E        G +      DV
Sbjct: 10  VAVVTGGSSGIGLATVELLLEAGAAVAF-CARDGERLRAAESALRQRFPGARLFASVCDV 68
Query: 86  SKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQX 145
                V +  +      G   IL+NNAG  R +         W + + L    V    + 
Sbjct: 69  LDALQVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRA 128
Query: 146 XXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIA 205
                       I+ + S++           SAA+AGV  L +++A E+A + + VN I 
Sbjct: 129 FLPQLESRADAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSMAFEFAPKGVRVNGIL 188
Query: 206 PGFIAS------------------DMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFL 247
            G + S                    TA+L  +      ++IPLGR G+P E A  + FL
Sbjct: 189 IGLVESGQWRRRFEAREERELDWAQWTAQLARN------KQIPLGRLGKPIEAARAILFL 242
Query: 248 ALNPAAGYITGQVLTIDGGM 267
           A +P + Y TG  + + GG+
Sbjct: 243 A-SPLSAYTTGSHIDVSGGL 261

>pdb|4EGF|A Chain A, Crystal Structure Of A L-Xylulose Reductase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 119/251 (47%), Gaps = 18/251 (7%)
Query: 29  AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK- 87
           A++TGA++GIG  +A +   AG ++++    S ++  E+     A G Q   FG DV   
Sbjct: 23  ALITGATKGIGADIARAFAAAGARLVL----SGRDVSELDAARRALGEQ---FGTDVHTV 75
Query: 88  -----EADVESMIKTAVDA-WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTG-VF 140
                E D  + +       +G +D+L+NNAGI+    ++      +   I +NL     
Sbjct: 76  AIDLAEPDAPAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPAL 135
Query: 141 LCTQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNIN 200
           L +            G II +AS   L        Y  +KAG++  TK +A+E     I 
Sbjct: 136 LASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKAGLVMATKVLARELGPHGIR 195
Query: 201 VNAIAPGFIASDMTAKLGEDLEK--KILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITG 258
            N++ P  + ++M  ++  D  K   ++ +IPLGR+  P EV+  V +LA + AA  I G
Sbjct: 196 ANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPLGRFAVPHEVSDAVVWLASD-AASMING 254
Query: 259 QVLTIDGGMVM 269
             + +DGG  M
Sbjct: 255 VDIPVDGGYTM 265

>pdb|3F1L|A Chain A, The 0.95 A Structure Of An Oxidoreductase, Ycik From E.Coli Length = 252

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 92/192 (47%), Gaps = 6/192 (3%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEI-EASGGQALTFGGDV- 85
           + +VTGAS GIGR  A +  + G  V++   R+ ++  +V   I E +G Q   F  D+ 
Sbjct: 14  IILVTGASDGIGREAAMTYARYGATVIL-LGRNEEKLRQVASHINEETGRQPQWFILDLL 72
Query: 86  -SKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQ-WQDVIDLNLTGVFLCT 143
                + + + +     +  +D +++NAG+  D   M  +  Q WQDV+ +N+   F+ T
Sbjct: 73  TCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLT 132
Query: 144 QXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNA 203
           Q           G ++  +S VG  G      Y+A+K    G+ + +A EY  R + VN 
Sbjct: 133 QALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEYQQR-LRVNC 191
Query: 204 IAPGFIASDMTA 215
           I PG   + M A
Sbjct: 192 INPGGTRTAMRA 203

>pdb|2XOX|A Chain A, Crystal Structure Of Pteridine Reductase (Ptr1) From Leishmania Donovani Length = 288

Iteration: 1
 Score = 75.9 bits (185), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 77/284 (27%), Positives = 117/284 (41%), Gaps = 46/284 (16%)
Query: 27  PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS-GGQALTFGGDV 85
           PVA+VTGA++ +G  +A  L   G  V ++Y RS+ EA  +   + A     A+    D+
Sbjct: 7   PVALVTGAAKRLGSGIAEGLHAEGYAVCLHYHRSAAEANTLAATLNARRPNSAIPVQADL 66
Query: 86  SKEADVE----------SMIKTAVD-------AWGTVDILINNAGITRDTLLMRMKK--- 125
           S  A             ++ K   D        WG  D+L+NNA     T L+R  +   
Sbjct: 67  SNVAKAPAGGADGAAPVTLFKRCADLVAACYTHWGRCDVLVNNASSFYPTPLLRKDEDGH 126
Query: 126 -----------SQWQDVIDLN-LTGVFLCTQXXXXXXXXXXXGR-----IINIASVVGLV 168
                      +   D+   N +   FL               R     I+N+   +   
Sbjct: 127 VPCVGDREAMEAAAADLFGSNAMAPYFLIKAFAHRVADTPAEQRGTNYSIVNMVDAMTSQ 186
Query: 169 GNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGF--IASDMTAKLGEDLEKKIL 226
             +G   Y+ AK  + GLT++ A E A   I VN + PG   +A DM   + ED      
Sbjct: 187 PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLADDMPPAVREDYR---- 242
Query: 227 EKIPL-GRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 269
            K+PL  R     EV+ +V FL  +  A Y+TG  + +DGG  +
Sbjct: 243 SKVPLYQRDSSAAEVSDVVIFLC-SSKAKYVTGTCVKVDGGYSL 285

>pdb|3TSC|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Map_2410 From Mycobacterium Paratuberculosis Bound To Nad Length = 277

Iteration: 1
 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 111/251 (44%), Gaps = 23/251 (9%)
Query: 21  AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVL-----------VNYARSSKEA-EEVC 68
           A  +E  VA +TGA+RG GRA A  +   G  ++           V Y  +S +   E  
Sbjct: 6   AGKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETV 65
Query: 69  KEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQW 128
           + +EA+  + +    D      +  ++   V A G +DI++ NAG+        +    +
Sbjct: 66  RLVEAANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDF 125
Query: 129 QDVIDLNLTGVFLCTQXXXXXXXXXXXG-RIINIASVVGLVGNIGQANYSAAKAGVIGLT 187
           +DV+D+N+TG +               G  II I+S  G+       +Y+A+K  V GL 
Sbjct: 126 RDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYTASKHAVTGLA 185
Query: 188 KTVAKEYASRNINVNAIAPGFI-----ASDMTAKLGEDLE-----KKILEKIPLGRYGQP 237
           +  A E    +I VN++ PG +     + DM   +G+ +E       +L         +P
Sbjct: 186 RAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLPDWVAEP 245
Query: 238 EEVAGLVEFLA 248
           E++A  V +LA
Sbjct: 246 EDIADTVCWLA 256

>pdb|1YB1|A Chain A, Crystal Structure Of Human 17-Beta-Hydroxysteroid Dehydrogenase Type Xi Length = 272

Iteration: 1
 Score = 74.3 bits (181), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 90/211 (42%), Gaps = 10/211 (4%)
Query: 22  QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTF 81
           ++V   + ++TGA  GIGR  A    K   K LV +  +    EE   + +  G +  TF
Sbjct: 27  KSVTGEIVLITGAGHGIGRLTAYEFAKLKSK-LVLWDINKHGLEETAAKCKGLGAKVHTF 85
Query: 82  GGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFL 141
             D S   D+ S  K      G V IL+NNAG+   + L   +  Q +   ++N+   F 
Sbjct: 86  VVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFW 145
Query: 142 CTQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNIN- 200
            T+           G I+ +AS  G V       Y ++K   +G  KT+  E A+  I  
Sbjct: 146 TTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITG 205
Query: 201 -------VNAIAPGFIASDMTAKLGEDLEKK 224
                   N +  GFI +  T+ LG  LE +
Sbjct: 206 VKTTCLCPNFVNTGFIKNPSTS-LGPTLEPE 235

>pdb|1BDB|A Chain A, Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From Pseudomonas Sp. Lb400 Length = 277

Iteration: 1
 Score = 73.9 bits (180), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 105/253 (41%), Gaps = 21/253 (8%)
Query: 30  VVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEA 89
           ++TG + G+GRA+       G KV V      K AE + +     G   L   GDV    
Sbjct: 9   LITGGASGLGRALVDRFVAEGAKVAV----LDKSAERLAELETDHGDNVLGIVGDVRSLE 64
Query: 90  DVESMIKTAVDAWGTVDILINNAGI-TRDTLLMRMKKSQ----WQDVIDLNLTGVFLCTQ 144
           D +      V  +G +D LI NAGI    T L+ + +      + +V  +N+ G ++   
Sbjct: 65  DQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKG-YIHAV 123
Query: 145 XXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAI 204
                      G +I   S  G   N G   Y+AAK  ++GL + +A E A   + VN +
Sbjct: 124 KACLPALVASRGNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELAFELAPY-VRVNGV 182
Query: 205 APGFIASDMTAKLGEDLEKKILEKIPL----------GRYGQPEEVAGLVEFLALNPAAG 254
             G I SD+       +  K +  +PL          GR  + EE  G   F A    A 
Sbjct: 183 GSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEYTGAYVFFATRGDAA 242
Query: 255 YITGQVLTIDGGM 267
             TG +L  DGG+
Sbjct: 243 PATGALLNYDGGL 255

>pdb|2BGK|A Chain A, X-Ray Structure Of Apo-Secoisolariciresinol Dehydrogenase Length = 278

Iteration: 1
 Score = 73.9 bits (180), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 104/213 (48%), Gaps = 12/213 (5%)
Query: 63  EAEEVCKEIEASGGQALTF-GGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTL-- 119
             ++VC  I +     ++F   DV+K+ DV +++ T +   G +DI+  N G+   T   
Sbjct: 52  HGQKVCNNIGSP--DVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYS 109
Query: 120 LMRMKKSQWQDVIDLNLTGVFLCTQXXXXXXXXXXXGRIINIASVVGLVGNIGQAN-YSA 178
           ++      ++ V+D+N+ G FL  +           G I+  AS+       G ++ Y+A
Sbjct: 110 ILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTA 169
Query: 179 AKAGVIGLTKTVAKEYASRNINVNAIAPGFIASD-MTAKLGED---LEKKILEKIPL-GR 233
            K  V+GLT ++  E     I VN ++P  +AS  +T   G D   +E+   +   L G 
Sbjct: 170 TKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGT 229
Query: 234 YGQPEEVAGLVEFLALNPAAGYITGQVLTIDGG 266
             + E+VA  V +LA + +  Y++G  L IDGG
Sbjct: 230 LLRAEDVADAVAYLAGDESK-YVSGLNLVIDGG 261

>pdb|3SVT|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 281

Iteration: 1
 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 102/208 (49%), Gaps = 9/208 (4%)
Query: 69  KEIEASG--GQALTF-GGDVSKEADVESMIKTAVDAW-GTVDILINNAGITRDT-LLMRM 123
           +E+EA G  G A+ +   D++ E +    +  AV AW G +  +++ AG + +   + ++
Sbjct: 53  QELEALGANGGAIRYEPTDITNEDETARAVD-AVTAWHGRLHGVVHCAGGSENIGPITQV 111
Query: 124 KKSQWQDVIDLNLTGVFLCTQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGV 183
               W+  +DLN+ G     +           G  + I+S+     +     Y   K+ V
Sbjct: 112 DSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAV 171
Query: 184 IGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGE--DLEKKILEKIPLGRYGQPEEVA 241
             L +  A E  +  + VN+I PG I +D+ A + E  +L        PL R G+ E+VA
Sbjct: 172 DHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLPRQGEVEDVA 231
Query: 242 GLVEFLALNPAAGYITGQVLTIDGGMVM 269
            +  FL L+ AA ++TGQV+ +DGG ++
Sbjct: 232 NMAMFL-LSDAASFVTGQVINVDGGQML 258

>pdb|1HXH|A Chain A, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID Dehydrogenase Length = 253

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 76/239 (31%), Positives = 112/239 (46%), Gaps = 26/239 (10%)
Query: 24  VEAPVAVVTGASRGIGRAVATSLGKAGCKVL---VNYARSSKEAEEVCKEIEASGGQALT 80
           ++  VA+VTG + G+G  V   L   G KV    +N A   + A E+       G +++ 
Sbjct: 4   LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL-------GERSMF 56
Query: 81  FGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVF 140
              DVS EAD   ++       GT+++L+NNAGI     +   +   +  ++ +N   VF
Sbjct: 57  VRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVF 116
Query: 141 L-CTQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVA-----KEY 194
           + C Q           G IIN+ASV   +     A YSA+KA V  LT+  A     + Y
Sbjct: 117 IGCQQ--GIAAMKETGGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGY 174
Query: 195 ASRNINVNAIAP-GFIASDMTAKLGEDLEKKILEKIP----LGRYGQPEEVAGLVEFLA 248
           A   I VN+I P G     M A L + + K+++   P     GR   PE +A LV FLA
Sbjct: 175 A---IRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLA 230

>pdb|2JAH|A Chain A, Biochemical And Structural Analysis Of The Clavulanic Acid Dehydeogenase (Cad) From Streptomyces Clavuligerus Length = 247

Iteration: 1
 Score = 72.4 bits (176), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 106/229 (46%), Gaps = 3/229 (1%)
Query: 24  VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGG 83
           ++  VA++TGAS GIG A A +L   G  V +   R  K    +  E+ A+G +      
Sbjct: 5   LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEK-LRALGDELTAAGAKVHVLEL 63
Query: 84  DVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCT 143
           DV+    V++ + + V+A G +DIL+NNAGI     +     + W   ID NL G+   T
Sbjct: 64  DVADRQGVDAAVASTVEALGGLDILVNNAGIXLLGPVEDADTTDWTRXIDTNLLGLXYXT 123
Query: 144 QXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNA 203
           +           G ++  +S+ G V     A Y A K GV   ++T+ +E   R + V  
Sbjct: 124 R-AALPHLLRSKGTVVQXSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTERGVRVVV 182
Query: 204 IAPGFIASDMTAKLGEDLEKKILE-KIPLGRYGQPEEVAGLVEFLALNP 251
           I PG   +++   +     K+  E +I   R  Q +++A  V +    P
Sbjct: 183 IEPGTTDTELRGHITHTATKEXYEQRISQIRKLQAQDIAEAVRYAVTAP 231

>pdb|3G1T|A Chain A, Crystal Structure Of Short Chain Dehydrogenase From Salmonella Enterica Subsp. Enterica Serovar Typhi Str. Ct18 Length = 258

Iteration: 1
 Score = 70.9 bits (172), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 87/192 (45%), Gaps = 5/192 (2%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEI---EASGGQALTFGGD 84
           + +VTGAS GIGR  A +  + G  V++   R+ ++   V + I   +    Q  T    
Sbjct: 16  IILVTGASDGIGREAALTYARYGATVIL-LGRNEEKLRRVAQHIADEQHVQPQWFTLDLL 74
Query: 85  VSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQ-WQDVIDLNLTGVFLCT 143
                +   +       +  +D +++NAG+  +   M  +  Q WQDV+ +N+   F+ T
Sbjct: 75  TCTAEECRQVADRIAAHYPRLDGVLHNAGLLGEIGPMSEQDPQIWQDVMQVNVNATFMLT 134
Query: 144 QXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNA 203
           Q           G ++  +S VG  G      Y+ +K    G+ + +A EY +R++ VN 
Sbjct: 135 QALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYATSKFATEGMMQVLADEYQNRSLRVNC 194
Query: 204 IAPGFIASDMTA 215
           I PG   + M A
Sbjct: 195 INPGGTRTSMRA 206

>pdb|3P19|A Chain A, Improved Nadph-Dependent Blue Fluorescent Protein Length = 266

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 87/191 (45%), Gaps = 17/191 (8%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVL-----VNYARSSKEAEEVCKEIEASGGQALTFG 82
           + V+TGAS GIG A+A    + G  +L     V   ++      +C ++           
Sbjct: 18  LVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNLPNTLCAQV----------- 66
Query: 83  GDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLC 142
            DV+ +   ++ I  A   +G  D ++NNAG+     +   + ++WQ + D+N+ G+   
Sbjct: 67  -DVTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNG 125
Query: 143 TQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
            Q           G IINI+S+ G       A Y   K  V  +++ V +E A+ N+ V 
Sbjct: 126 MQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENVREEVAASNVRVM 185
Query: 203 AIAPGFIASDM 213
            IAP  + +++
Sbjct: 186 TIAPSAVKTEL 196

>pdb|3NYW|A Chain A, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg) From Bacteroides Thetaiotaomicron Length = 250

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 91/194 (46%), Gaps = 5/194 (2%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGG---QALTFGGD 84
           +A++TGAS+GIG  +A  L   G +V++  ARS +  E+V  EI  S     + +    D
Sbjct: 9   LAIITGASQGIGAVIAAGLATDGYRVVL-IARSKQNLEKVHDEIXRSNKHVQEPIVLPLD 67
Query: 85  VSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQ 144
           ++     ++ IK     +G VDIL+N A    D  L       ++ + ++N+   +   +
Sbjct: 68  ITDCTKADTEIKDIHQKYGAVDILVNAAAXFXDGSLSE-PVDNFRKIXEINVIAQYGILK 126
Query: 145 XXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAI 204
                      G I N+AS     G      Y + K  ++GL +++ +E A   I V  +
Sbjct: 127 TVTEIXKVQKNGYIFNVASRAAKYGFADGGIYGSTKFALLGLAESLYRELAPLGIRVTTL 186
Query: 205 APGFIASDMTAKLG 218
            PG++ +D   K G
Sbjct: 187 CPGWVNTDXAKKAG 200

>pdb|3KVO|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Hydroxysteroid Dehydrogenase Like 2 (Hsdl2) Length = 346

Iteration: 1
 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 92/186 (49%), Gaps = 11/186 (5%)
Query: 30  VVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEV-------CKEIEASGGQALTFG 82
            +TGASRGIG+A+A    K G  +++  A++++   ++        +EIEA GG+AL   
Sbjct: 49  FITGASRGIGKAIALKAAKDGANIVIA-AKTAQPHPKLLGTIYTAAEEIEAVGGKALPCI 107
Query: 83  GDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLC 142
            DV  E  + + ++ A+  +G +DIL+NNA     T  +     +   ++++N  G +L 
Sbjct: 108 VDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLA 167
Query: 143 TQXXXXXXXXXXXGRIINIASVVGL--VGNIGQANYSAAKAGVIGLTKTVAKEYASRNIN 200
           ++             I+NI+  + L  V       Y+ AK G+      +A+E+    I 
Sbjct: 168 SKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVLGMAEEFKGE-IA 226
Query: 201 VNAIAP 206
           VNA+ P
Sbjct: 227 VNALWP 232

>pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent Serine Dehydrogenase From Saccharomyces Cerevisiae Complexed With Nadp+ Length = 287

Iteration: 1
 Score = 68.6 bits (166), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 95/201 (47%), Gaps = 5/201 (2%)
Query: 19  EAAQNVEAPVAVVTGASRGIGRAVATSLGKA--GCKVLVNYARSSKEAEEVCKEIEASGG 76
           +AA+ +     ++TGAS GIG+A A    +A  G   L+  AR  ++ EE+ K I+    
Sbjct: 26  KAAERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFP 85
Query: 77  QALTFGG--DVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLM-RMKKSQWQDVID 133
            A       D+++   ++  I+     +  +DIL+NNAG    +  + ++     QDV D
Sbjct: 86  NAKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFD 145
Query: 134 LNLTGVFLCTQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKE 193
            N+T +   TQ           G I+N+ S+ G       + Y A+K  V   T ++ KE
Sbjct: 146 TNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCASKFAVGAFTDSLRKE 205
Query: 194 YASRNINVNAIAPGFIASDMT 214
             +  I V  IAPG + ++ +
Sbjct: 206 LINTKIRVILIAPGLVETEFS 226

>pdb|1W6U|A Chain A, Structure Of Human Decr Ternary Complex Length = 302

Iteration: 1
 Score = 67.8 bits (164), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 89/187 (47%), Gaps = 5/187 (2%)
Query: 84  DVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGV-FLC 142
           DV     V++ +   +   G  +I+INNA     +   R+  + W+ + D+ L G  F+ 
Sbjct: 84  DVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVT 143
Query: 143 TQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
            +              ++I ++    G+      ++AKAGV  ++K++A E+    +  N
Sbjct: 144 LEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFN 203
Query: 203 AIAPGFIASD-MTAKLGED--LEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQ 259
            I PG I +    ++L      EK+++ +IP GR G  EE+A L  FL  +  A +I G 
Sbjct: 204 VIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCSD-YASWINGA 262
Query: 260 VLTIDGG 266
           V+  DGG
Sbjct: 263 VIKFDGG 269

>pdb|4GKB|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase Homolog (Target Efi- 505321) From Burkholderia Multivorans, Unliganded Structure Length = 258

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 88/190 (46%), Gaps = 10/190 (5%)
Query: 84  DVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCT 143
           ++  +A     +   +  +G +D L+NNAG+  D + +   +  +   ++ NL   +   
Sbjct: 63  ELQDDAQCRDAVAQTIATFGRLDGLVNNAGVN-DGIGLDAGRDAFVASLERNLIHYYAMA 121
Query: 144 QXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNA 203
                       G I+NI+S   + G    + Y A+K   + LT+  A       + VNA
Sbjct: 122 HYCVPHLKATR-GAIVNISSKTAVTGQGNTSGYCASKGAQLALTREWAVALREHGVRVNA 180
Query: 204 IAPGFIASDMTAKL---GEDLEKKILE---KIPLG-RYGQPEEVAGLVEFLALNPAAGYI 256
           + P  + + +        ED E K+ E   K+PLG R+  P+E+A    FL L+P A + 
Sbjct: 181 VIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTPDEIADTAVFL-LSPRASHT 239
Query: 257 TGQVLTIDGG 266
           TG+ L +DGG
Sbjct: 240 TGEWLFVDGG 249

>pdb|3E03|A Chain A, Crystal Structure Of A Putative Dehydrogenase From Xanthomonas Campestris Length = 274

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 89/198 (44%), Gaps = 21/198 (10%)
Query: 30  VVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS-------GGQALTFG 82
            +TGASRGIG A+A    + G  V +  A+S+    ++   I ++       GGQ L   
Sbjct: 10  FITGASRGIGLAIALRAARDGANVAI-AAKSAVANPKLPGTIHSAAAAVNAAGGQGLALK 68
Query: 83  GDVSKEADVESMIKTAVDAWGTVDILINNAGI-----TRDTLLMRMKKSQWQDVIDLNLT 137
            D+ +E  V + +   VD +G +DIL+NNA       T DT   R    Q      +N  
Sbjct: 69  CDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPXKRFDLXQ-----QVNAR 123
Query: 138 GVFLCTQXXXXXXXXXXXGRIINIASVVGLVGNIGQAN--YSAAKAGVIGLTKTVAKEYA 195
           G F+C Q             I+ +A    L      A+  Y+ AK G   +T  +A E+ 
Sbjct: 124 GSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGYTLAKXGXSLVTLGLAAEFG 183
Query: 196 SRNINVNAIAP-GFIASD 212
            + + +NA+ P   IA+D
Sbjct: 184 PQGVAINALWPRTVIATD 201

>pdb|3E9Q|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase From Shigella Flexneri Length = 273

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 86/184 (46%), Gaps = 6/184 (3%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEI-EASGGQALTFGGDV- 85
           + +VTGAS GIGR  A +  + G  V++   R+ ++  +V   I E +G Q   F  D+ 
Sbjct: 35  IILVTGASDGIGREAAXTYARYGATVIL-LGRNEEKLRQVASHINEETGRQPQWFILDLL 93
Query: 86  -SKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQ-WQDVIDLNLTGVFLCT 143
                + + + +  V  +  +D +++NAG+  D      +  Q WQDV  +N+   F  T
Sbjct: 94  TCTSENCQQLAQRIVVNYPRLDGVLHNAGLLGDVCPXSEQNPQVWQDVXQINVNATFXLT 153
Query: 144 QXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNA 203
           Q           G ++  +S VG  G      Y+A+K    G  + +A EY  R + VN 
Sbjct: 154 QALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGXXQVLADEYQQR-LRVNC 212
Query: 204 IAPG 207
           I PG
Sbjct: 213 INPG 216

>pdb|3KSU|A Chain A, Crystal Structure Of Short-Chain Dehydrogenase From Oenococcus Oeni Psu-1 Length = 262

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/252 (24%), Positives = 115/252 (45%), Gaps = 15/252 (5%)
Query: 22  QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNY--ARSSKEAEEVCKEIEASGGQAL 79
            +++  V V+ G  + +G   A +       ++++Y  A+ S  A ++  E+E  G +  
Sbjct: 7   HDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVA 66
Query: 80  TFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDL--NLT 137
            +  D+S E +V  +   A   +G VDI IN  G      ++   ++++ D +D   N  
Sbjct: 67  LYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEF-DAMDTINNKV 125
Query: 138 GVFLCTQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASR 197
             F   Q           G II IA+ +        + Y+  KA V   T+  +KE   +
Sbjct: 126 AYFFIKQ---AAKHMNPNGHIITIATSLLAAYTGFYSTYAGNKAPVEHYTRAASKELMKQ 182
Query: 198 NINVNAIAPGFIASDMTAKLGEDLEKK--ILEKIPLG-RYGQPEEVAGLVEFLALNPAAG 254
            I+VNAIAPG    D +   G++ ++     +   +G +  + E++A +++FL  +    
Sbjct: 183 QISVNAIAPG--PMDTSFFYGQETKESTAFHKSQAMGNQLTKIEDIAPIIKFLTTD--GW 238
Query: 255 YITGQVLTIDGG 266
           +I GQ +  +GG
Sbjct: 239 WINGQTIFANGG 250

>pdb|3PXX|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nicotinamide Adenine Dinucleotide Length = 287

Iteration: 1
 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 74/284 (26%), Positives = 119/284 (41%), Gaps = 44/284 (15%)
Query: 24  VEAPVAVVTGASRGIGRAVATSLGKAGCKVLV----------NYA-RSSKEAEEVCKEIE 72
           V+  V +VTG +RG GR+ A  L + G  +++           Y   +S++ EE   E+E
Sbjct: 8   VQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVE 67
Query: 73  ASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVI 132
            +G +A T   DV   A V   +  AV  +G +D+++ NAGI    L   +    + D  
Sbjct: 68  KTGRKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGIC--PLGAHLPVQAFADAF 125
Query: 133 DLNLTGVFLCTQXXXXXXXXXXXGRIINIASVVGLV-----------GNIGQANYSAAKA 181
           D++  GV                  II   SV GL+              G A YS AK 
Sbjct: 126 DVDFVGVI--NTVHAALPYLTSGASIITTGSVAGLIAAAQPPGAGGPQGPGGAGYSYAKQ 183
Query: 182 GVIGLTKTVAKEYASRNINVNAIAPGFIASD------MTAKLGEDLEK----------KI 225
            V   T  +A + A ++I  N I P  + +D      M  +   DLE             
Sbjct: 184 LVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAFPA 243
Query: 226 LEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 269
           ++ +P   Y +  +++  V FLA +  + Y+TG    +D G ++
Sbjct: 244 MQAMPTP-YVEASDISNAVCFLASD-ESRYVTGLQFKVDAGAML 285

>pdb|1W73|A Chain A, Binary Structure Of Human Decr Solved By Semet Sad. Length = 302

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 86/187 (45%), Gaps = 5/187 (2%)
Query: 84  DVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGV-FLC 142
           DV     V++ +   +   G  +I+INNA     +   R+  + W+ + D+ L G  F+ 
Sbjct: 84  DVRDPDXVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVT 143
Query: 143 TQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
            +              ++I ++    G+      ++AKAGV   +K++A E+       N
Sbjct: 144 LEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAXSKSLAAEWGKYGXRFN 203
Query: 203 AIAPGFIASD-MTAKLGED--LEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQ 259
            I PG I +    ++L      EK+ + +IP GR G  EE+A L  FL  +  A +I G 
Sbjct: 204 VIQPGPIKTKGAFSRLDPTGTFEKEXIGRIPCGRLGTVEELANLAAFLCSD-YASWINGA 262
Query: 260 VLTIDGG 266
           V+  DGG
Sbjct: 263 VIKFDGG 269

>pdb|3F1K|A Chain A, Crystal Structure Of Ycik From E. Coli, An Oxidoreductase, Complexed With Nadp+ At 2.6a Resolution Length = 252

Iteration: 1
 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 6/192 (3%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEI-EASGGQALTFGGDV- 85
           + +VTGAS GIGR  A +  + G  V++   R+ ++  +V   I E +G Q   F  D+ 
Sbjct: 14  IILVTGASDGIGREAAXTYARYGATVIL-LGRNEEKLRQVASHINEETGRQPQWFILDLL 72
Query: 86  -SKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQ-WQDVIDLNLTGVFLCT 143
                + + + +     +  +D +++NAG+  D      +  Q WQDV  +N+   F  T
Sbjct: 73  TCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPXSEQNPQVWQDVXQVNVNATFXLT 132
Query: 144 QXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNA 203
           Q           G ++  +S VG  G      Y+A+K    G  + +A EY  R + VN 
Sbjct: 133 QALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGXXQVLADEYQQR-LRVNC 191
Query: 204 IAPGFIASDMTA 215
           I PG   + M A
Sbjct: 192 INPGGTRTAMRA 203

>pdb|3ASU|A Chain A, Crystal Structure Of Serine Dehydrogenase From Escherichia Coli Length = 248

Iteration: 1
 Score = 64.7 bits (156), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 101/238 (42%), Gaps = 28/238 (11%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGG-DVS 86
           + +VTGA+ G G  +     + G KV+    R     +E  +E++   G  L     DV 
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRR-----QERLQELKDELGDNLYIAQLDVR 56
Query: 87  KEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQ------WQDVIDLNLTGVF 140
             A +E M+ +    W  +DIL+NNAG     L + M+ +       W+ +ID N  G+ 
Sbjct: 57  NRAAIEEMLASLPAEWCNIDILVNNAG-----LALGMEPAHKASVEDWETMIDTNNKGLV 111
Query: 141 LCTQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNIN 200
             T+           G IINI S  G     G   Y A KA V   +  +  +     + 
Sbjct: 112 YMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVR 171
Query: 201 VNAIAPGFIA----SDMTAKLGED--LEKKILEKIPLGRYGQPEEVAGLVEFLALNPA 252
           V  I PG +     S++  K G+D   EK     + L     PE+V+  V +++  PA
Sbjct: 172 VTDIEPGLVGGTEFSNVRFK-GDDGKAEKTYQNTVAL----TPEDVSEAVWWVSTLPA 224

>pdb|4E4Y|A Chain A, The Crystal Structure Of A Short Chain Dehydrogenase Family Protein From Francisella Tularensis Subsp. Tularensis Schu S4 Length = 244

Iteration: 1
 Score = 64.3 bits (155), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 61/249 (24%), Positives = 112/249 (44%), Gaps = 28/249 (11%)
Query: 30  VVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEA 89
           +VTG S+GIG+AV   L +     ++N       + E  K I+A          D++K+ 
Sbjct: 8   LVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAENLKFIKA----------DLTKQQ 57
Query: 90  DVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNL-TGVFLCTQXXXX 148
           D+ +++    +   + D +  NAGI     +  +     + V+DLN+ + ++        
Sbjct: 58  DITNVLDIIKNV--SFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIK---GL 112
Query: 149 XXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGF 208
                    I+   S    +       Y+ +K  +   TK++A + A   I VN + PG 
Sbjct: 113 ENNLKVGASIVFNGSDQCFIAKPNSFAYTLSKGAIAQXTKSLALDLAKYQIRVNTVCPGT 172
Query: 209 IASDMTAKL-----------GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYIT 257
           + +D+   L            ++ +K+  ++ PL R  QP+E+A LV FL L+  + + T
Sbjct: 173 VDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIFL-LSDKSKFXT 231
Query: 258 GQVLTIDGG 266
           G ++ IDGG
Sbjct: 232 GGLIPIDGG 240

>pdb|1ZMO|A Chain A, Apo Structure Of Haloalcohol Dehalogenase Hhea Of Arthrobacter Sp. Ad2 Length = 244

Iteration: 1
 Score = 63.9 bits (154), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 102/249 (40%), Gaps = 16/249 (6%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           +A+VT A    G A   +L + G  V+ + A  +  AE    E E  G  AL        
Sbjct: 3   IALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGTIALA------- 55
Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDL-NLTGVF--LCTQ 144
           E   E ++   +     +D +++N  I R    + ++ +   D+  +     +F  L  Q
Sbjct: 56  EQKPERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQ 115
Query: 145 XXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAI 204
                        +I I S VG         Y  A+A  + L ++ AK  +   I + AI
Sbjct: 116 SAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPARAATVALVESAAKTLSRDGILLYAI 175
Query: 205 APGFIASDMTAKLGE-----DLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQ 259
            P F  +       +     +L +++   +PLGR G+P+E+  L+ FLA   AA  I GQ
Sbjct: 176 GPNFFNNPTYFPTSDWENNPELRERVDRDVPLGRLGRPDEMGALITFLASRRAAP-IVGQ 234
Query: 260 VLTIDGGMV 268
                GG +
Sbjct: 235 FFAFTGGYL 243

>pdb|4DRY|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Rhizobium Meliloti Length = 281

Iteration: 1
 Score = 63.9 bits (154), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 63/136 (46%), Gaps = 3/136 (2%)
Query: 84  DVSKEADVESMIKTAVDAWGTVDILINNAGITRDTL-LMRMKKSQWQDVIDLNLTGVFLC 142
           DV     V ++       +  +D+L+NNAG     + L  +   QW  ++  NLTG FLC
Sbjct: 91  DVGDPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLC 150
Query: 143 TQXXXXXXXXXXX--GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNIN 200
           TQ             GRIIN  S+         A Y+A K  + GLTK+ A +    +I 
Sbjct: 151 TQHAFRXXKAQTPRGGRIINNGSISAQTPRPNSAPYTATKHAITGLTKSTALDGRXHDIA 210
Query: 201 VNAIAPGFIASDMTAK 216
              I  G  A+D TA+
Sbjct: 211 CGQIDIGNAATDXTAR 226

>pdb|3TN7|A Chain A, Crystal Structure Of Short-Chain Alcohol Dehydrogenase From Hyperthermophilic Archaeon Thermococcus Sibiricus Complexed With 5- Hydroxy-Nadp Length = 257

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 70/121 (57%), Gaps = 2/121 (1%)
Query: 21  AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEI-EASGGQAL 79
           +  +E  VAV+TGASRGIG A+A +L + G  + +  ARS    E++  E+ +  G +  
Sbjct: 19  SHMLEMKVAVITGASRGIGEAIARALARDGYALALG-ARSVDRLEKIAHELMQEQGVEVF 77
Query: 80  TFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGV 139
               DVSK   VE   K  ++ +G VD+++ NAG+     L  + + ++ ++I++NL GV
Sbjct: 78  YHHLDVSKAESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGV 137
Query: 140 F 140
           +
Sbjct: 138 W 138

>pdb|3M1A|A Chain A, The Crystal Structure Of A Short-Chain Dehydrogenase From Streptomyces Avermitilis To 2a Length = 281

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 96/191 (50%), Gaps = 4/191 (2%)
Query: 26  APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDV 85
           A V +VTGAS G GRA+A +   AG  V +  AR ++  +++   + A   +A     DV
Sbjct: 5   AKVWLVTGASSGFGRAIAEAAVAAGDTV-IGTARRTEALDDL---VAAYPDRAEAISLDV 60
Query: 86  SKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQX 145
           +    ++ +    +  +G VD+L+NNAG T+        + + +D+ +L++ G    T+ 
Sbjct: 61  TDGERIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRA 120
Query: 146 XXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIA 205
                     G ++NI+S  G +   G + YSA KA +  L++ +A E A   I V  + 
Sbjct: 121 LLPQXRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVE 180
Query: 206 PGFIASDMTAK 216
           PG   +++  K
Sbjct: 181 PGAFRTNLFGK 191

>pdb|3L77|A Chain A, X-Ray Structure Alcohol Dehydrogenase From Archaeon Thermococcus Sibiricus Complexed With 5-Hydroxy-Nadp Length = 235

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 68/117 (58%), Gaps = 2/117 (1%)
Query: 25  EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEI-EASGGQALTFGG 83
           E  VAV+TGASRGIG A+A +L + G  + +  ARS    E++  E+ +  G +      
Sbjct: 1   EMKVAVITGASRGIGEAIARALARDGYALALG-ARSVDRLEKIAHELMQEQGVEVFYHHL 59
Query: 84  DVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVF 140
           DVSK   VE   K  ++ +G VD+++ NAG+     L  + + ++ ++I++NL GV+
Sbjct: 60  DVSKAESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVW 116

>pdb|4H15|A Chain A, Crystal Structure Of A Short Chain Alcohol Dehydrogenase-Related Dehydrogenase (Target Id Nysgrc-011812) From Sinorhizobium Meliloti 1021 In Space Group P21 Length = 261

Iteration: 1
 Score = 61.2 bits (147), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 116/264 (43%), Gaps = 31/264 (11%)
Query: 23  NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVN-YARSSKEAEEVCKEIEASGGQALTF 81
           N+    A++T  ++G G A  +   + G +VL    AR     EE+  E + +  +    
Sbjct: 8   NLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEGLPEELFVEADLTTKE---- 63
Query: 82  GGDVSKEADVESMIKTAVDAWGTVDILINN--AGITRDTLLMRMKKSQWQDVIDLNLTGV 139
           G  +  EA  + +        G VD++++              +    W + + LNL   
Sbjct: 64  GCAIVAEATRQRL--------GGVDVIVHXLGGSSAAGGGFSALSDDDWYNELSLNLFAA 115
Query: 140 FLCTQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIG-LTKTVAKEYASRN 198
               +           G ++++ S+  ++         AA    +   +K  +KE + + 
Sbjct: 116 VRLDRQLVPDXVARGSGVVVHVTSIQRVLPLPESTTAYAAAKAALSTYSKAXSKEVSPKG 175
Query: 199 INVNAIAPGFIASDMTAKLGE--------DLE--KKILEK----IPLGRYGQPEEVAGLV 244
           + V  ++PG+I ++ + +L E        DLE  KKI+      IPLGR  +PEEVA L+
Sbjct: 176 VRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIXDGLGGIPLGRPAKPEEVANLI 235
Query: 245 EFLALNPAAGYITGQVLTIDGGMV 268
            FLA + AA  ITG   TIDGG V
Sbjct: 236 AFLASDRAAS-ITGAEYTIDGGTV 258

>pdb|2YW9|A Chain A, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8 Length = 261

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 68/247 (27%), Positives = 121/247 (48%), Gaps = 15/247 (6%)
Query: 29  AVVTGAS--RGIGRAVATSLGKAGCKVLVNYA--RSSKEAEEVCKEIEASGGQALTFGGD 84
           A+V G +  R +G A+A  L +AG +V ++Y   R   EAE++    EA GG AL F  D
Sbjct: 11  ALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLA---EALGG-ALLFRAD 66
Query: 85  VSKEADVESMIKTAVDAWGTVDILINN-AGITRDTLLMRMKKSQWQD-VIDLNLTGVFLC 142
           V+++ +++++     +A+G +D L++  A   R+ +  R   ++ QD ++ L ++   L 
Sbjct: 67  VTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLV 126
Query: 143 TQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSA-AKAGVIGLTKTVAKEYASRNINV 201
                        G I+ + +       + + N  A AKA +    + +A E   + + V
Sbjct: 127 AVARRAEPLLREGGGIVTL-TYYASEKVVPKYNVMAIAKAALEASVRYLAYELGPKGVRV 185
Query: 202 NAIAPGFIASDMTAKLG--EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQ 259
           NAI+ G + +     +     +  ++ +  PL R    EEV  L  FL L+P A  ITG+
Sbjct: 186 NAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFL-LSPLASGITGE 244
Query: 260 VLTIDGG 266
           V+ +D G
Sbjct: 245 VVYVDAG 251

>pdb|1ULU|A Chain A, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8 Length = 261

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 122/249 (48%), Gaps = 17/249 (6%)
Query: 29  AVVTGAS--RGIGRAVATSLGKAGCKVLVNYA--RSSKEAEEVCKEIEASGGQALTFGGD 84
           A+V G +  R +G A+A  L +AG +V ++Y   R   EAE++    EA GG AL F  D
Sbjct: 11  ALVXGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLA---EALGG-ALLFRAD 66
Query: 85  VSKEADVESMIKTAVDAWGTVDILINN-AGITRDTLLMRMKKSQWQD-VIDLNLTGVFLC 142
           V+++ +++++     +A+G +D L++  A   R+    R   ++ QD ++ L ++   L 
Sbjct: 67  VTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAXEGRYIDTRRQDWLLALEVSAYSLV 126
Query: 143 TQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSA-AKAGVIGLTKTVAKEYASRNINV 201
                        G I+ + +       + + N  A AKA +    + +A E   + + V
Sbjct: 127 AVARRAEPLLREGGGIVTL-TYYASEKVVPKYNVXAIAKAALEASVRYLAYELGPKGVRV 185
Query: 202 NAIAPGFIASDMTAKLGEDLEK---KILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITG 258
           NAI+ G + + + A+      K   ++ +  PL R    EEV  L  FL L+P A  ITG
Sbjct: 186 NAISAGPVRT-VAARSIPGFTKXYDRVAQTAPLRRNITQEEVGNLGLFL-LSPLASGITG 243
Query: 259 QVLTIDGGM 267
           +V+ +D G 
Sbjct: 244 EVVYVDAGY 252

>pdb|2DKN|A Chain A, Crystal Structure Of The 3-alpha-hydroxysteroid Dehydrogenase From Pseudomonas Sp. B-0831 Complexed With Nadh Length = 255

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 51/98 (52%), Gaps = 10/98 (10%)
Query: 176 YSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFI------ASDMTAKLGEDLEKKILEKI 229
           Y+ +K  V  L +    ++A R + +N +APG +      AS    + GE   + +    
Sbjct: 153 YAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRYGESTRRFV---A 209
Query: 230 PLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM 267
           PLGR  +P EVA  + FL L P A +I G VL +DGGM
Sbjct: 210 PLGRGSEPREVAEAIAFL-LGPQASFIHGSVLFVDGGM 246

>pdb|3D5Q|A Chain A, Crystal Structure Of 11b-Hsd1 In Complex With Triazole Inhibitor Length = 272

Iteration: 1
 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 80/175 (45%), Gaps = 5/175 (2%)
Query: 30  VVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKE-IEASGGQALTFGGDVSKE 88
           +VTGAS+GIGR +A  L K G  V+V  ARS +  ++V    +E     A    G +   
Sbjct: 18  IVTGASKGIGREMAYHLAKMGAHVVVT-ARSKETLQKVVSHCLELGAASAHYIAGTMEDM 76
Query: 89  ADVESMIKTAVDAWGTVDILINNAGITRDTL-LMRMKKSQWQDVIDLNLTGVFLCTQXXX 147
              E  +  A    G +D+LI N  IT  +L L        +  +++N     + T    
Sbjct: 77  TFAEQFVAQAGKLMGGLDMLILN-HITNTSLNLFHDDIHHVRKSMEVNFLSYVVLT-VAA 134
Query: 148 XXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
                   G I+ ++S+ G V     A YSA+K  + G   ++ KEY+   +NV+
Sbjct: 135 LPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVS 189

>pdb|2ILT|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Sulfone Inhibitor Length = 275

Iteration: 1
 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 80/175 (45%), Gaps = 5/175 (2%)
Query: 30  VVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKE-IEASGGQALTFGGDVSKE 88
           +VTGAS+GIGR +A  L K G  V+V  ARS +  ++V    +E     A    G +   
Sbjct: 28  IVTGASKGIGREMAYHLAKMGAHVVVT-ARSKETLQKVVSHCLELGAASAHYIAGTMEDM 86
Query: 89  ADVESMIKTAVDAWGTVDILINNAGITRDTL-LMRMKKSQWQDVIDLNLTGVFLCTQXXX 147
              E  +  A    G +D+LI N  IT  +L L        +  +++N     + T    
Sbjct: 87  TFAEQFVAQAGKLMGGLDMLILN-HITNTSLNLFHDDIHHVRKSMEVNFLSYVVLT-VAA 144
Query: 148 XXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
                   G I+ ++S+ G V     A YSA+K  + G   ++ KEY+   +NV+
Sbjct: 145 LPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVS 199

>pdb|4BB5|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292

Iteration: 1
 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 80/175 (45%), Gaps = 5/175 (2%)
Query: 30  VVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKE-IEASGGQALTFGGDVSKE 88
           +VTGAS+GIGR +A  L K G  V+V  ARS +  ++V    +E     A    G +   
Sbjct: 38  IVTGASKGIGREMAYHLAKMGAHVVVT-ARSKETLQKVVSHCLELGAASAHYIAGTMEDM 96
Query: 89  ADVESMIKTAVDAWGTVDILINNAGITRDTL-LMRMKKSQWQDVIDLNLTGVFLCTQXXX 147
              E  +  A    G +D+LI N  IT  +L L        +  +++N     + T    
Sbjct: 97  TFAEQFVAQAGKLMGGLDMLILN-HITNTSLNLFHDDIHHVRKSMEVNFLSYVVLT-VAA 154
Query: 148 XXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
                   G I+ ++S+ G V     A YSA+K  + G   ++ KEY+   +NV+
Sbjct: 155 LPMLKQSNGSIVVVSSLAGKVAYPLVAAYSASKFALDGFFSSIRKEYSVSRVNVS 209

>pdb|1XU7|A Chain A, Crystal Structure Of The Interface Open Conformation Of Tetrameric 11b-hsd1 Length = 286

Iteration: 1
 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 80/175 (45%), Gaps = 5/175 (2%)
Query: 30  VVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKE-IEASGGQALTFGGDVSKE 88
           +VTGAS+GIGR +A  L K G  V+V  ARS +  ++V    +E     A    G +   
Sbjct: 32  IVTGASKGIGREMAYHLAKMGAHVVVT-ARSKETLQKVVSHCLELGAASAHYIAGTMEDM 90
Query: 89  ADVESMIKTAVDAWGTVDILINNAGITRDTL-LMRMKKSQWQDVIDLNLTGVFLCTQXXX 147
              E  +  A    G +D+LI N  IT  +L L        +  +++N     + T    
Sbjct: 91  TFAEQFVAQAGKLMGGLDMLILN-HITNTSLNLFHDDIHHVRKSMEVNFLSYVVLT-VAA 148
Query: 148 XXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
                   G I+ ++S+ G V     A YSA+K  + G   ++ KEY+   +NV+
Sbjct: 149 LPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVS 203

>pdb|3PDJ|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase 1 (11b-Hsd1) In Complex With 4,4-Disubstituted Cyclohexylbenzamide Inhibitor Length = 273

Iteration: 1
 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 87/193 (45%), Gaps = 7/193 (3%)
Query: 14  EQATNEA--AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKE- 70
           +Q  NE    + ++    +VTGAS+GIGR +A  L K G  V+V  ARS +  ++V    
Sbjct: 1   QQPLNEEFRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVT-ARSKETLQKVVSHC 59
Query: 71  IEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTL-LMRMKKSQWQ 129
           +E     A    G +      E  +  A    G +D+LI N  IT  +L L        +
Sbjct: 60  LELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILN-HITNTSLNLFHDDIHHVR 118
Query: 130 DVIDLNLTGVFLCTQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKT 189
             +++N     + T            G I+ ++S+ G V     A YSA+K  + G   +
Sbjct: 119 KSMEVNFLSYVVLT-VAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSS 177
Query: 190 VAKEYASRNINVN 202
           + KEY+   +NV+
Sbjct: 178 IRKEYSVSRVNVS 190

>pdb|2RBE|A Chain A, The Discovery Of 2-Anilinothiazolones As 11beta-Hsd1 Inhibitors Length = 275

Iteration: 1
 Score = 57.8 bits (138), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 80/175 (45%), Gaps = 5/175 (2%)
Query: 30  VVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKE-IEASGGQALTFGGDVSKE 88
           +VTGAS+GIGR +A  L K G  V+V  ARS +  ++V    +E     A    G +   
Sbjct: 21  IVTGASKGIGREMAYHLAKMGAHVVVT-ARSKETLQKVVSHCLELGAASAHYIAGTMEDM 79
Query: 89  ADVESMIKTAVDAWGTVDILINNAGITRDTL-LMRMKKSQWQDVIDLNLTGVFLCTQXXX 147
              E  +  A    G +D+LI N  IT  +L L        +  +++N     + T    
Sbjct: 80  TFAEQFVAQAGKLMGGLDMLILN-HITNTSLNLFHDDIHHVRKSMEVNFLSYVVLT-VAA 137
Query: 148 XXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
                   G I+ ++S+ G V     A YSA+K  + G   ++ KEY+   +NV+
Sbjct: 138 LPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVS 192

>pdb|3IAH|A Chain A, Crystal Structure Of Short Chain Dehydrogenase (ycik) From Salmonella Enterica Subsp. Enterica Serovar Typhimurium Str. Lt2 In Complex With Nadp And Acetate. Length = 256

Iteration: 1
 Score = 57.8 bits (138), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 5/184 (2%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEI---EASGGQALTFGGD 84
           + +VTGAS GIGR  A +  + G  V++   R+ ++   V + I   +    Q  T    
Sbjct: 17  IILVTGASDGIGREAALTYARYGATVIL-LGRNEEKLRRVAQHIADEQHVQPQWFTLDLL 75
Query: 85  VSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQ-WQDVIDLNLTGVFLCT 143
                +   +       +  +D +++NAG+  +      +  Q WQDV  +N+   F  T
Sbjct: 76  TCTAEECRQVADRIAAHYPRLDGVLHNAGLLGEIGPXSEQDPQIWQDVXQVNVNATFXLT 135
Query: 144 QXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNA 203
           Q           G ++  +S VG  G      Y+ +K    G  + +A EY +R++ VN 
Sbjct: 136 QALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYATSKFATEGXXQVLADEYQNRSLRVNC 195
Query: 204 IAPG 207
           I PG
Sbjct: 196 INPG 199

>pdb|2BEL|A Chain A, Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase In Complex With Nadp And Carbenoxolone Length = 283

Iteration: 1
 Score = 57.8 bits (138), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 80/175 (45%), Gaps = 5/175 (2%)
Query: 30  VVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKE-IEASGGQALTFGGDVSKE 88
           +VTGAS+GIGR +A  L K G  V+V  ARS +  ++V    +E     A    G +   
Sbjct: 35  IVTGASKGIGREMAYHLAKMGAHVVVT-ARSKETLQKVVSHCLELGAASAHYIAGTMEDM 93
Query: 89  ADVESMIKTAVDAWGTVDILINNAGITRDTL-LMRMKKSQWQDVIDLNLTGVFLCTQXXX 147
              E  +  A    G +D+LI N  IT  +L L        +  +++N     + T    
Sbjct: 94  TFAEQFVAQAGKLMGGLDMLILNH-ITNTSLNLFHDDIHHVRKSMEVNFLSYVVLT-VAA 151
Query: 148 XXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
                   G I+ ++S+ G V     A YSA+K  + G   ++ KEY+   +NV+
Sbjct: 152 LPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVS 206

>pdb|2IRW|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Ether Inhibitor Length = 264

Iteration: 1
 Score = 57.8 bits (138), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 80/175 (45%), Gaps = 5/175 (2%)
Query: 30  VVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKE-IEASGGQALTFGGDVSKE 88
           +VTGAS+GIGR +A  L K G  V+V  ARS +  ++V    +E     A    G +   
Sbjct: 13  IVTGASKGIGREMAYHLAKMGAHVVVT-ARSKETLQKVVSHCLELGAASAHYIAGTMEDM 71
Query: 89  ADVESMIKTAVDAWGTVDILINNAGITRDTL-LMRMKKSQWQDVIDLNLTGVFLCTQXXX 147
              E  +  A    G +D+LI N  IT  +L L        +  +++N     + T    
Sbjct: 72  TFAEQFVAQAGKLMGGLDMLILN-HITNTSLNLFHDDIHHVRKSMEVNFLSYVVLT-VAA 129
Query: 148 XXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
                   G I+ ++S+ G V     A YSA+K  + G   ++ KEY+   +NV+
Sbjct: 130 LPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVS 184

>pdb|4BB6|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292

Iteration: 1
 Score = 57.8 bits (138), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 80/175 (45%), Gaps = 5/175 (2%)
Query: 30  VVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKE-IEASGGQALTFGGDVSKE 88
           +VTGAS+GIGR +A  L K G  V+V  ARS +  ++V    +E     A    G +   
Sbjct: 38  IVTGASKGIGREMAYHLAKMGAHVVVT-ARSKETLQKVVSHCLELGAASAHYIAGTMEDM 96
Query: 89  ADVESMIKTAVDAWGTVDILINNAGITRDTL-LMRMKKSQWQDVIDLNLTGVFLCTQXXX 147
              E  +  A    G +D+LI N  IT  +L L        +  +++N     + T    
Sbjct: 97  TFAEQFVAQAGKLMGGLDMLILN-HITNTSLNLFHDDIHHVRKSMEVNFLSYVVLT-VAA 154
Query: 148 XXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
                   G I+ ++S+ G V     A YSA+K  + G   ++ KEY+   +NV+
Sbjct: 155 LPMLKQSNGSIVVVSSLAGKVAYPLVAAYSASKFALDGFFSSIRKEYSVSRVNVS 209

>pdb|3CH6|A Chain A, Crystal Structure Of 11beta-Hsd1 Double Mutant (L262r, F278e) Complexed With (3,3-Dimethylpiperidin-1-Yl)(6-(3- Fluoro-4-Methylphenyl)pyridin-2-Yl)methanone Length = 286

Iteration: 1
 Score = 57.4 bits (137), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 80/175 (45%), Gaps = 5/175 (2%)
Query: 30  VVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKE-IEASGGQALTFGGDVSKE 88
           +VTGAS+GIGR +A  L K G  V+V  ARS +  ++V    +E     A    G +   
Sbjct: 32  IVTGASKGIGREMAYHLAKMGAHVVVT-ARSKETLQKVVSHCLELGAASAHYIAGTMEDM 90
Query: 89  ADVESMIKTAVDAWGTVDILINNAGITRDTL-LMRMKKSQWQDVIDLNLTGVFLCTQXXX 147
              E  +  A    G +D+LI N  IT  +L L        +  +++N     + T    
Sbjct: 91  TFAEQFVAQAGKLMGGLDMLILNH-ITNTSLNLFHDDIHHVRKSMEVNFLSYVVLT-VAA 148
Query: 148 XXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
                   G I+ ++S+ G V     A YSA+K  + G   ++ KEY+   +NV+
Sbjct: 149 LPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVS 203

>pdb|4HFR|A Chain A, Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In Complex With An Orally Bioavailable Acidic Inhibitor Azd4017. Length = 272

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 80/175 (45%), Gaps = 5/175 (2%)
Query: 30  VVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKE-IEASGGQALTFGGDVSKE 88
           +VTGAS+GIGR +A  L K G  V+V  ARS +  ++V    +E     A    G +   
Sbjct: 18  IVTGASKGIGREMAYHLAKMGAHVVVT-ARSKETLQKVVSHCLELGAASAHYIAGTMEDM 76
Query: 89  ADVESMIKTAVDAWGTVDILINNAGITRDTL-LMRMKKSQWQDVIDLNLTGVFLCTQXXX 147
              E  +  A    G +D+LI N  IT  +L L        +  +++N     + T    
Sbjct: 77  TFAEQFVAQAGKLMGGLDMLILN-HITNTSLNLFHDDIHHVRKSMEVNFLSYVVLT-VAA 134
Query: 148 XXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
                   G I+ ++S+ G V     A YSA+K  + G   ++ KEY+   +NV+
Sbjct: 135 LPMLKQSNGSIVVVSSLAGKVAYPLVAAYSASKFALDGFFSSIRKEYSVSRVNVS 189

>pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase (Saro_0793) From Novosphingobium Aromaticivorans Length = 319

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 93/227 (40%), Gaps = 12/227 (5%)
Query: 29  AVVTGASRGIGRAVATSLGKAGCKV-LVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           A VTG + G+G  +   L   GCKV + +  + S +      E E SG + +    DV+ 
Sbjct: 11  AFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVAS 70
Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGV------FL 141
               +         +G V IL NNAG+     +       W  ++ +NL GV      F+
Sbjct: 71  REGFKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFV 130
Query: 142 CTQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINV 201
                         G ++N AS+   +       Y+  K  V GL++++        I V
Sbjct: 131 PRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAVRGLSESLHYSLLKYEIGV 190
Query: 202 NAIAPGFIASDMTAKLGEDLEKKIL--EKIPLGRYGQPEEVAGLVEF 246
           + + PG + S + A   +D+    L  E  P+ +    E +AG+ EF
Sbjct: 191 SVLCPGLVKSYIYAS--DDIRPDALKGEVKPVDKTAV-ERLAGVHEF 234

>pdb|1XSE|A Chain A, Crystal Structure Of Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Length = 295

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 78/176 (44%), Gaps = 7/176 (3%)
Query: 30  VVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEV---CKEIEASGGQALTFGGDVS 86
           +VTGAS+GIGR +A  L K G  V+V  ARS +  ++V   C E+ A+    +   G + 
Sbjct: 36  IVTGASKGIGREIAYHLAKMGAHVVVT-ARSKEALQKVVARCLELGAASAHYI--AGSME 92
Query: 87  KEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXX 146
                E  +  A +  G +D+LI N  +         +    +  +++N    F+     
Sbjct: 93  DMTFAEEFVAEAGNLMGGLDMLILNHVLYNRLTFFHGEIDNVRKSMEVNFHS-FVVLSVA 151
Query: 147 XXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
                    G I  ++SV G +     A YSA+K  + G   T+  E+    +NV+
Sbjct: 152 AMPMLMQSQGSIAVVSSVAGKITYPLIAPYSASKFALDGFFSTLRSEFLVNKVNVS 207

>pdb|3LZ6|A Chain A, Guinea Pig 11beta Hydroxysteroid Dehydrogenase With Pf-877423 Length = 263

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 78/176 (44%), Gaps = 7/176 (3%)
Query: 30  VVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEV---CKEIEASGGQALTFGGDVS 86
           +VTGAS+GIGR +A  L K G  V+V  ARS +  ++V   C E+ A+    +   G + 
Sbjct: 13  IVTGASKGIGREIAYHLAKMGAHVVVT-ARSKEALQKVVARCLELGAASAHYI--AGSME 69
Query: 87  KEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXX 146
                E  +  A +  G +D+LI N  +         +    +  +++N    F+     
Sbjct: 70  DMTFAEEFVAEAGNLMGGLDMLILNHVLYNRLTFFHGEIDNVRKSMEVNFHS-FVVLSVA 128
Query: 147 XXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
                    G I  ++SV G +     A YSA+K  + G   T+  E+    +NV+
Sbjct: 129 AMPMLMQSQGSIAVVSSVAGKITYPLIAPYSASKFALDGFFSTLRSEFLVNKVNVS 184

>pdb|3G49|A Chain A, N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b-Hydroxysteroid Dehydrogenase Type 1: Discovery Of Pf-915275 Length = 277

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 78/176 (44%), Gaps = 7/176 (3%)
Query: 30  VVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEV---CKEIEASGGQALTFGGDVS 86
           +VTGAS+GIGR +A  L K G  V+V  ARS +  ++V   C E+ A+    +   G + 
Sbjct: 15  IVTGASKGIGREIAYHLAKMGAHVVVT-ARSKEALQKVVARCLELGAASAHYI--AGSME 71
Query: 87  KEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXX 146
                E  +  A +  G +D+LI N  +         +    +  +++N    F+     
Sbjct: 72  DMTFAEEFVAEAGNLMGGLDMLILNHVLYNRLTFFHGEIDNVRKSMEVNFHS-FVVLSVA 130
Query: 147 XXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
                    G I  ++SV G +     A YSA+K  + G   T+  E+    +NV+
Sbjct: 131 AMPMLMQSQGSIAVVSSVAGKITYPLIAPYSASKFALDGFFSTLRSEFLVNKVNVS 186

>pdb|3DWF|A Chain A, Crystal Structure Of The Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Mutant F278e Length = 276

Iteration: 1
 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 78/176 (44%), Gaps = 7/176 (3%)
Query: 30  VVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEV---CKEIEASGGQALTFGGDVS 86
           +VTGAS+GIGR +A  L K G  V+V  ARS +  ++V   C E+ A+    +   G + 
Sbjct: 15  IVTGASKGIGREIAYHLAKMGAHVVVT-ARSKEALQKVVARCLELGAASAHYI--AGSME 71
Query: 87  KEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXX 146
                E  +  A +  G +D+LI N  +         +    +  +++N    F+     
Sbjct: 72  DMTFAEEFVAEAGNLMGGLDMLILNHVLYNRLTFFHGEIDNVRKSMEVNFHS-FVVLSVA 130
Query: 147 XXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
                    G I  ++SV G +     A YSA+K  + G   T+  E+    +NV+
Sbjct: 131 AMPMLMQSQGSIAVVSSVAGKITYPLIAPYSASKFALDGFFSTLRSEFLVNKVNVS 186

>pdb|2NWQ|A Chain A, Short Chain Dehydrogenase From Pseudomonas Aeruginosa Length = 272

Iteration: 1
 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 92/227 (40%), Gaps = 8/227 (3%)
Query: 30  VVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEA 89
            +TGA+ G G A A    +AG   LV   R  +  + +  E+ A   + L    DV   A
Sbjct: 25  FITGATSGFGEACARRFAEAGWS-LVLTGRREERLQALAGELSAK-TRVLPLTLDVRDRA 82
Query: 90  DVESMIKTAVDAWGTVDILINNAGITRDT-LLMRMKKSQWQDVIDLNLTGVFLCTQXXXX 148
              + +    + + T+  LINNAG+   T          W   +D N+ G+   T+    
Sbjct: 83  AXSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTXVDTNIKGLLYSTRLLLP 142
Query: 149 XXXXXXXG-RIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
                  G  I+N+ SV G     G   Y   KA V   +  +  +     + V  + PG
Sbjct: 143 RLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPG 202
Query: 208 FIASDMT-AKLGEDLEKKILEKIPLGRYG-QPEEVAGLVEFLALNPA 252
              S+ +  + G D  +   +K   G +  QPE++A  + ++   PA
Sbjct: 203 LCESEFSLVRFGGDQAR--YDKTYAGAHPIQPEDIAETIFWIXNQPA 247

>pdb|3KZV|A Chain A, The Crystal Structure Of A Cytoplasmic Protein With Unknown Function From Saccharomyces Cerevisiae Length = 254

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/195 (23%), Positives = 90/195 (46%), Gaps = 6/195 (3%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           V +VTG SRGIG+++   L       +V Y  +  EA  + K  E  G +     GD+++
Sbjct: 4   VILVTGVSRGIGKSIVDVLFSLDKDTVV-YGVARSEAP-LKKLKEKYGDRFFYVVGDITE 61
Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTL-LMRMKKSQWQDVIDLNLTGVFLCTQXX 146
           ++ ++ ++  AV   G +D L+ NAG+      +  +  + W+ + D+N   + +     
Sbjct: 62  DSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSI-VSLVGI 120
Query: 147 XXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
                    G ++ ++S    +       Y ++KA +     T+A E   R +   A+AP
Sbjct: 121 ALPELKKTNGNVVFVSSDACNMYFSSWGAYGSSKAALNHFAMTLANE--ERQVKAIAVAP 178
Query: 207 GFIASDMTAKLGEDL 221
           G + +DM   + E++
Sbjct: 179 GIVDTDMQVNIRENV 193

>pdb|3OIF|A Chain A, Crystal Structure Of Enoyl-Acp Reductases I (Fabi) From B. Subtilis (Complex With Nad And Tcl) Length = 266

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/242 (25%), Positives = 106/242 (43%), Gaps = 17/242 (7%)
Query: 36  RGIGRAVATSLGKAGCKVLVNYA--RSSKEAEEVCKEIEASGGQALTFGGDVSKEADVES 93
           R I   +A SL +AG +++  YA  R  K   E+   ++ +   ++    DV+ +A++E+
Sbjct: 19  RSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRN--DSIILPCDVTNDAEIET 76
Query: 94  MIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQD--VIDLNLTGVFLCTQXXXXXXX 151
              +  +  G +  + +         L+    +  +D  ++  N++   L          
Sbjct: 77  CFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPM 136
Query: 152 XXXXGRIINIASVVGLVGNIGQANYSA---AKAGVIGLTKTVAKEYASRNINVNAIAPGF 208
               G I+ +     L G +   NY+    AKA +    K +A +    NI VN+I+ G 
Sbjct: 137 MTEGGSIVTLTY---LGGELVMPNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGP 193
Query: 209 IASDMTAKLGEDLE---KKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDG 265
           I + ++AK   D     K I E+ PL R   PEEV     FL  + + G ITG+ L +D 
Sbjct: 194 IRT-LSAKGISDFNSILKDIEERAPLRRTTTPEEVGDTAAFLFSDMSRG-ITGENLHVDS 251
Query: 266 GM 267
           G 
Sbjct: 252 GF 253

>pdb|4IXT|A Chain A, Structure Of A 37-fold Mutant Of Halohydrin Dehalogenase (hhec) Bound To Ethyl (r)-4-cyano-3-hydroxybutyrate Length = 254

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 102/250 (40%), Gaps = 21/250 (8%)
Query: 29  AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGG--DVS 86
           A+VT      G   A  L +AG  V  +      E+ +   E+EA    A T+     +S
Sbjct: 4   AIVTNVKHFGGMGSALRLSEAGHTVACH-----DESFKHQDELEAF---AETYPQLIPMS 55
Query: 87  KEADVESMIKTAVDAWGTVDILI-NNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQX 145
           ++  VE +I+    A G VDIL+ N+        + +     ++D+++      F     
Sbjct: 56  EQEPVE-LIEAVTSALGHVDILVSNDIAPVEWRPIDKYAVEDYRDMVEALQIKPFALANA 114
Query: 146 XXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIA 205
                     G II I S          + Y++A+AG   L   ++KE    NI V AIA
Sbjct: 115 VASQMKRRKSGHIIFITSAASFGPWKELSTYASARAGASALANALSKELGEHNIPVFAIA 174
Query: 206 P-GFIASDMTAKLGEDLEKKILEKI-------PLGRYGQPEEVAGLVEFLALNPAAGYIT 257
           P G  + D       +  K   E +        L R G  +E+  LV FLA   +  Y+T
Sbjct: 175 PNGVDSGDSPYYYPSEPWKTSPEHVAWVRKYTALQRLGTQKELGELVTFLASG-SCDYLT 233
Query: 258 GQVLTIDGGM 267
           GQV  + GG 
Sbjct: 234 GQVFWLAGGF 243

>pdb|1PWX|A Chain A, Crystal Structure Of The Haloalcohol Dehalogenase Hhec Complexed With Bromide Length = 254

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 46/191 (24%), Positives = 78/191 (40%), Gaps = 10/191 (5%)
Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLM-RMKKSQWQDVIDLNLTGVFLCTQXX 146
           E +   +I+    A+G VD+L++N     +   + +     ++  ++      F      
Sbjct: 56  EQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAV 115
Query: 147 XXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
                    G II I S          + Y++A+AG   L   ++KE    NI V AI P
Sbjct: 116 ASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGP 175
Query: 207 GFIASDMTA--------KLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITG 258
            ++ S+ +         K   +    + +   L R G  +E+  LV FLA   +  Y+TG
Sbjct: 176 NYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASG-SCDYLTG 234
Query: 259 QVLTIDGGMVM 269
           QV  + GG  M
Sbjct: 235 QVFWLAGGFPM 245

>pdb|3GMD|A Chain A, Structure-Based Design Of 7-Azaindole-Pyrrolidines As Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I Length = 264

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 81/177 (45%), Gaps = 9/177 (5%)
Query: 30  VVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEV---CKEIEASGGQALTFGGDVS 86
           +VTGAS+GIGR +A  L K G  V++  ARS +  ++V   C E+ A+    +   G + 
Sbjct: 13  IVTGASKGIGREMAYHLSKMGAHVVLT-ARSEEGLQKVVSRCLELGAASAHYI--AGTME 69
Query: 87  KEADVESMIKTAVDAWGTVDILINNAGITRDTL-LMRMKKSQWQDVIDLNLTGVFLCTQX 145
                E  I  A    G +D+LI N  IT+ +L L        + V+++N    ++    
Sbjct: 70  DMTFAEQFIVKAGKLMGGLDMLILN-HITQTSLSLFHDDIHSVRRVMEVNFLS-YVVMST 127
Query: 146 XXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
                     G I  I+S+ G V     A YSA+K  + G   T+  E     +NV+
Sbjct: 128 AALPMLKQSNGSIAVISSLAGKVTYPMVAPYSASKFALDGFFSTIRTELYITKVNVS 184

>pdb|1Y5M|A Chain A, The Crystal Structure Of Murine 11b-Hydroxysteroid Dehydrogenase: An Important Therapeutic Target For Diabetes Length = 276

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 81/177 (45%), Gaps = 9/177 (5%)
Query: 30  VVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEV---CKEIEASGGQALTFGGDVS 86
           +VTGAS+GIGR +A  L K G  V++  ARS +  ++V   C E+ A+    +   G + 
Sbjct: 22  IVTGASKGIGREMAYHLSKMGAHVVLT-ARSEEGLQKVVSRCLELGAASAHYI--AGTME 78
Query: 87  KEADVESMIKTAVDAWGTVDILINNAGITRDTL-LMRMKKSQWQDVIDLNLTGVFLCTQX 145
                E  I  A    G +D+LI N  IT+ +L L        + V+++N    ++    
Sbjct: 79  DMTFAEQFIVKAGKLMGGLDMLILN-HITQTSLSLFHDDIHSVRRVMEVNFLS-YVVMST 136
Query: 146 XXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
                     G I  I+S+ G +     A YSA+K  + G   T+  E     +NV+
Sbjct: 137 AALPMLKQSNGSIAVISSLAGKMTQPMIAPYSASKFALDGFFSTIRTELYITKVNVS 193

>pdb|3E9N|A Chain A, Crystal Structure Of A Putative Short-Chain DehydrogenaseREDUCTASE FROM CORYNEBACTERIUM GLUTAMICUM Length = 245

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 94/220 (42%), Gaps = 13/220 (5%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           +AVVTGA+ G+G  +   L +      + YA   +  E +    E  G + +    D+ K
Sbjct: 7   IAVVTGATGGMGIEIVKDLSRDH----IVYALG-RNPEHLAALAEIEGVEPIE--SDIVK 59
Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXX 147
           E   E  +   +     VD L++ A + RDT +     ++W   +DLN+  V        
Sbjct: 60  EVLEEGGVDK-LKNLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVI-VPAELSRQL 117
Query: 148 XXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
                   G +I I S  G   + G   Y+A+K  + GL     KE A+  I V+ ++PG
Sbjct: 118 LPALRAASGCVIYINSGAGNGPHPGNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPG 177
Query: 208 FIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFL 247
              + M   L +        +I    Y +P+E+A  + F+
Sbjct: 178 PTNTPMLQGLMDSQGTNFRPEI----YIEPKEIANAIRFV 213

>pdb|3H7A|A Chain A, Crystal Structure Of Short-Chain Dehydrogenase From Rhodopseudomonas Palustris Length = 252

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 80/176 (45%), Gaps = 3/176 (1%)
Query: 26  APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDV 85
           A VAV+ GA   IG  +A      G  V     R+ ++   +  EIEA+GG+ +    D 
Sbjct: 8   ATVAVI-GAGDYIGAEIAKKFAAEGFTVFAGR-RNGEKLAPLVAEIEAAGGRIVARSLDA 65
Query: 86  SKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQX 145
             E +V + +  A DA   +++ I N G   +  ++      ++ V ++     F+  + 
Sbjct: 66  RNEDEVTAFL-NAADAHAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRE 124
Query: 146 XXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINV 201
                     G+I    +   L G  G A +++AK G+  + +++A+E   +NI+V
Sbjct: 125 SARLMLAHGQGKIFFTGATASLRGGSGFAAFASAKFGLRAVAQSMARELMPKNIHV 180

>pdb|1FJH|A Chain A, The Crystal Structure Of 3-Alpha-Hydroxysteroid Dehydrogenase From Comamonas Testosteroni, A Member Of The Short Chain DehydrogenaseREDUCTASE FAMILY Length = 257

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 10/102 (9%)
Query: 172 GQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDM------TAKLGEDLEKKI 225
           G   Y+ +K  +    +  A  +    + +N IAPG   + +        + GE + K +
Sbjct: 151 GNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFV 210
Query: 226 LEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM 267
               P+GR  +P E+A ++ FL ++PAA Y+ G  + IDGG+
Sbjct: 211 ---PPMGRRAEPSEMASVIAFL-MSPAASYVHGAQIVIDGGI 248

>pdb|2QIO|A Chain A, X-Ray Structure Of Enoyl-Acyl Carrier Protein Reductase From Bacillus Anthracis With Triclosan Length = 256

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 106/245 (43%), Gaps = 25/245 (10%)
Query: 36  RGIGRAVATSLGKAGCKVLVNYA--RSSKEAEEVCKEIEASGGQALTFGGDVSKEADVES 93
           R I   +A SL  AG K++  YA  R  +   E+   +E  G ++L    DV+ + ++ +
Sbjct: 18  RSIAWGIARSLHNAGAKLIFTYAGERLERNVRELADTLE--GQESLVLPCDVTNDEELTA 75
Query: 94  MIKTAVDAWGTVDILINN-AGITRDTLLMRMKKSQWQD------VIDLNLTGVFLCTQXX 146
             +T     GT+  + +  A   RD L     K ++ D      ++  N++   L     
Sbjct: 76  CFETIKQEVGTIHGVAHCIAFANRDDL-----KGEFVDTSRDGFLLAQNISAFSLTAVAR 130
Query: 147 XXXXXXXXXGRIINIASVVGLVGNIGQANYSA---AKAGVIGLTKTVAKEYASRNINVNA 203
                    G   NI ++  L G     NY+    AKA +    K +A +     I VNA
Sbjct: 131 EAKKVMTEGG---NILTLTYLGGERVVKNYNVMGVAKASLEASVKYLANDLGQHGIRVNA 187
Query: 204 IAPGFIASDMTAKLGE--DLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL 261
           I+ G I +     +G+   + ++I E+ PL R    EEV     FL  + A G +TG+ +
Sbjct: 188 ISAGPIRTLSAKGVGDFNSILREIEERAPLRRTTTQEEVGDTAVFLFSDLARG-VTGENI 246
Query: 262 TIDGG 266
            +D G
Sbjct: 247 HVDSG 251

>pdb|3OJF|A Chain A, Crystal Structure Of The Bacillus Cereus Enoyl-Acyl Carrier Protein Reductase With Nadp+ And Indole Naphthyridinone (Complex Form) Length = 257

Iteration: 1
 Score = 47.4 bits (111), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 106/245 (43%), Gaps = 25/245 (10%)
Query: 36  RGIGRAVATSLGKAGCKVLVNYA--RSSKEAEEVCKEIEASGGQALTFGGDVSKEADVES 93
           R I   +A SL  AG K++  YA  R  +   E+   +E  G ++L    DV+ + ++ +
Sbjct: 18  RSIAWGIARSLHNAGAKLIFTYAGERLERNVRELADTLE--GQESLVLPCDVTNDEELTA 75
Query: 94  MIKTAVDAWGTVDILINN-AGITRDTLLMRMKKSQWQD------VIDLNLTGVFLCTQXX 146
             +T     GT+  + +  A   RD L     K ++ D      ++  N++   L     
Sbjct: 76  CFETIKQEVGTIHGVAHCIAFANRDDL-----KGEFVDTSRDGFLLAQNISAFSLTAVAR 130
Query: 147 XXXXXXXXXGRIINIASVVGLVGNIGQANYSA---AKAGVIGLTKTVAKEYASRNINVNA 203
                    G   NI ++  L G     NY+    AKA +    K +A +     I VNA
Sbjct: 131 EAKKVMTEGG---NILTLTYLGGERVVKNYNVMGVAKASLEASVKYLANDLGQHGIRVNA 187
Query: 204 IAPGFIASDMTAKLGE--DLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL 261
           I+ G I +     +G+   + ++I E+ PL R    EEV     FL  + A G +TG+ +
Sbjct: 188 ISAGPIRTLSAKGVGDFNSILREIEERAPLRRTTTQEEVGDTAVFLFSDLARG-VTGENI 246
Query: 262 TIDGG 266
            +D G
Sbjct: 247 HVDSG 251

>pdb|3RJ5|A Chain A, Structure Of Alcohol Dehydrogenase From Drosophila Lebanonesis T114v Mutant Complexed With Nad+ Length = 254

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 86/214 (40%), Gaps = 19/214 (8%)
Query: 37  GIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQA-LTFGG-DVSKE-ADVES 93
           GIG   +  L K   K  V   R   E      E++A   +  +TF   DV+   A+ + 
Sbjct: 16  GIGLDTSRELVKRNLKNFVILDRV--ENPTALAELKAINPKVNITFHTYDVTVPVAESKK 73
Query: 94  MIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXXXXXXXX 153
           ++K   D   TVDILIN AGI  D  + R         I +N TG+   T          
Sbjct: 74  LLKKIFDQLKTVDILINGAGILDDHQIER--------TIAINFTGLVNVTTAILDFWDKR 125
Query: 154 XXGR---IINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIA 210
             G    I NI SV G         YSA+KA V+  T ++AK      +   +I PG   
Sbjct: 126 KGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITR 185
Query: 211 SDMTAKLGE--DLEKKILEKIPLGRYGQPEEVAG 242
           + +        D+E ++ E + L    Q  E  G
Sbjct: 186 TPLVHTFNSWLDVEPRVAELL-LSHPTQTSEQCG 218

>pdb|1A4U|A Chain A, Alcohol Dehydrogenase From Drosophila Lebanonensis Length = 254

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 86/214 (40%), Gaps = 19/214 (8%)
Query: 37  GIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQA-LTFGG-DVSKE-ADVES 93
           GIG   +  L K   K  V   R   E      E++A   +  +TF   DV+   A+ + 
Sbjct: 16  GIGLDTSRELVKRNLKNFVILDRV--ENPTALAELKAINPKVNITFHTYDVTVPVAESKK 73
Query: 94  MIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXXXXXXXX 153
           ++K   D   TVDILIN AGI  D  + R         I +N TG+   T          
Sbjct: 74  LLKKIFDQLKTVDILINGAGILDDHQIER--------TIAINFTGLVNTTTAILDFWDKR 125
Query: 154 XXGR---IINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIA 210
             G    I NI SV G         YSA+KA V+  T ++AK      +   +I PG   
Sbjct: 126 KGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITR 185
Query: 211 SDMTAKLGE--DLEKKILEKIPLGRYGQPEEVAG 242
           + +        D+E ++ E + L    Q  E  G
Sbjct: 186 TPLVHTFNSWLDVEPRVAELL-LSHPTQTSEQCG 218

>pdb|1NAS|A Chain A, Sepiapterin Reductase Complexed With N-acetyl Serotonin Length = 259

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 92/202 (45%), Gaps = 21/202 (10%)
Query: 28  VAVVTGASRGIGRAVATSLGK---AGCKVLVNYARSSKEAEEVCKEIEASGG--QALTFG 82
           V V+TGASRG GRA+A  L +    G  +LV+ ARS     ++ +E+ A     + +   
Sbjct: 8   VCVLTGASRGFGRALAPQLARLLSPGSVMLVS-ARSESMLRQLKEELGAQQPDLKVVLAA 66
Query: 83  GDVSKEADVESMIKTAVDAWGTVD-----ILINNAGITRDT---LLMRMKKSQWQDVIDL 134
            D+  EA V+ ++ +AV      +     +LINNA    D     L     ++  +   L
Sbjct: 67  ADLGTEAGVQRLL-SAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWAL 125
Query: 135 NLTGVFLCTQXXXXXXXXXXXG---RIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVA 191
           NLT + LC             G    ++NI+S+  L    G   Y A KA    L + +A
Sbjct: 126 NLTSM-LCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQVLA 184
Query: 192 KEYASRNINVNAIAPGFIASDM 213
            E  S  + V + APG + +DM
Sbjct: 185 AEEPS--VRVLSYAPGPLDNDM 204

>pdb|1SEP|A Chain A, Mouse Sepiapterin Reductase Complexed With Nadp And Sepiapterin Length = 261

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 92/202 (45%), Gaps = 21/202 (10%)
Query: 28  VAVVTGASRGIGRAVATSLGK---AGCKVLVNYARSSKEAEEVCKEIEASGG--QALTFG 82
           V V+TGASRG GRA+A  L +    G  +LV+ ARS     ++ +E+ A     + +   
Sbjct: 10  VCVLTGASRGFGRALAPQLARLLSPGSVMLVS-ARSESMLRQLKEELGAQQPDLKVVLAA 68
Query: 83  GDVSKEADVESMIKTAVDAWGTVD-----ILINNAGITRDT---LLMRMKKSQWQDVIDL 134
            D+  EA V+ ++ +AV      +     +LINNA    D     L     ++  +   L
Sbjct: 69  ADLGTEAGVQRLL-SAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWAL 127
Query: 135 NLTGVFLCTQXXXXXXXXXXXG---RIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVA 191
           NLT + LC             G    ++NI+S+  L    G   Y A KA    L + +A
Sbjct: 128 NLTSM-LCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQVLA 186
Query: 192 KEYASRNINVNAIAPGFIASDM 213
            E  S  + V + APG + +DM
Sbjct: 187 AEEPS--VRVLSYAPGPLDNDM 206

>pdb|1MG5|A Chain A, Crystal Structure Of Drosophila Melanogaster Alcohol Dehydrogenase Complexed With Nadh And Acetate At 1.6 A Length = 255

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 84/209 (40%), Gaps = 19/209 (9%)
Query: 37  GIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQ-ALTFGG-DVSKE-ADVES 93
           GIG   +  L K   K LV   R    A     E++A   +  +TF   DV+   A+   
Sbjct: 17  GIGLDTSKELLKRDLKNLVILDRIENPA--AIAELKAINPKVTVTFYPYDVTVPIAETTK 74
Query: 94  MIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXXXXXXXX 153
           ++KT      TVD+LIN AGI  D         Q +  I +N TG+   T          
Sbjct: 75  LLKTIFAQLKTVDVLINGAGILDD--------HQIERTIAVNYTGLVNTTTAILDFWDKR 126
Query: 154 XXGR---IINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIA 210
             G    I NI SV G         YS  KA V+  T ++AK      +    + PG   
Sbjct: 127 KGGPGGIICNIGSVTGFNAIYQVPVYSGTKAAVVNFTSSLAKLAPITGVTAYTVNPGITR 186
Query: 211 SDMTAKLGE--DLEKKILEKIPLGRYGQP 237
           + +  K     D+E ++ EK+ L    QP
Sbjct: 187 TTLVHKFNSWLDVEPQVAEKL-LAHPTQP 214

>pdb|3SC4|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase (A0qtm2 Homolog) Mycobacterium Thermoresistibile Length = 285

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/184 (23%), Positives = 80/184 (43%), Gaps = 9/184 (4%)
Query: 31  VTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEV-------CKEIEASGGQALTFGG 83
           ++G SRGIG A+A  +   G  V +  A+S++   ++        KEIE +GGQAL   G
Sbjct: 14  ISGGSRGIGLAIAKRVAADGANVAL-VAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVG 72
Query: 84  DVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCT 143
           D+     V + +   V+ +G +DI +NNA       +  +   ++  +  + + G +  +
Sbjct: 73  DIRDGDAVAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVS 132
Query: 144 QXXXXXXXXXXXGRIINIASVVGLVGN-IGQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
           Q             I+ ++  + L    +    Y  AK G+      +A+E     I  N
Sbjct: 133 QSCIPHMKGRDNPHILTLSPPIRLEPKWLRPTPYMMAKYGMTLCALGIAEELRDAGIASN 192
Query: 203 AIAP 206
            + P
Sbjct: 193 TLWP 196

>pdb|1EQU|A Chain A, Type 1 17-Beta Hydroxysteroid Dehydrogenase Equilin Complexed With Nadp+ Length = 327

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 52/218 (23%), Positives = 87/218 (39%), Gaps = 23/218 (10%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYA-----RSSKEAEEVCKEIEASGGQALTFG 82
           V ++TG S GIG  +A  L     +    YA     ++     E  + +    G   T  
Sbjct: 4   VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQ 63
Query: 83  GDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLC 142
            DV     V +  +   +  G VD+L+ NAG+     L  + +     V+D+N+ G    
Sbjct: 64  LDVRDSKSVAAARERVTE--GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRM 121
Query: 143 TQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
            Q           GR++   SV GL+G      Y A+K  + GL +++A       ++++
Sbjct: 122 LQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLS 181
Query: 203 AIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEV 240
            I  G + +              +EK+     G PEEV
Sbjct: 182 LIECGPVHT------------AFMEKV----LGSPEEV 203

>pdb|1FDU|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant H221l Complexed With Estradiol And Nadp+ Length = 327

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 52/218 (23%), Positives = 87/218 (39%), Gaps = 23/218 (10%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYA-----RSSKEAEEVCKEIEASGGQALTFG 82
           V ++TG S GIG  +A  L     +    YA     ++     E  + +    G   T  
Sbjct: 4   VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQ 63
Query: 83  GDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLC 142
            DV     V +  +   +  G VD+L+ NAG+     L  + +     V+D+N+ G    
Sbjct: 64  LDVRDSKSVAAARERVTE--GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRM 121
Query: 143 TQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
            Q           GR++   SV GL+G      Y A+K  + GL +++A       ++++
Sbjct: 122 LQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLS 181
Query: 203 AIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEV 240
            I  G + +              +EK+     G PEEV
Sbjct: 182 LIECGPVHT------------AFMEKV----LGSPEEV 203

>pdb|1FDS|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Complexed With 17- Beta-Estradiol Length = 327

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 52/218 (23%), Positives = 87/218 (39%), Gaps = 23/218 (10%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYA-----RSSKEAEEVCKEIEASGGQALTFG 82
           V ++TG S GIG  +A  L     +    YA     ++     E  + +    G   T  
Sbjct: 4   VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQ 63
Query: 83  GDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLC 142
            DV     V +  +   +  G VD+L+ NAG+     L  + +     V+D+N+ G    
Sbjct: 64  LDVRDSKSVAAARERVTE--GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRM 121
Query: 143 TQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
            Q           GR++   SV GL+G      Y A+K  + GL +++A       ++++
Sbjct: 122 LQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLS 181
Query: 203 AIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEV 240
            I  G + +              +EK+     G PEEV
Sbjct: 182 LIECGPVHT------------AFMEKV----LGSPEEV 203

>pdb|1FDW|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant H221q Complexed With Estradiol Length = 327

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 52/218 (23%), Positives = 87/218 (39%), Gaps = 23/218 (10%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYA-----RSSKEAEEVCKEIEASGGQALTFG 82
           V ++TG S GIG  +A  L     +    YA     ++     E  + +    G   T  
Sbjct: 4   VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQ 63
Query: 83  GDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLC 142
            DV     V +  +   +  G VD+L+ NAG+     L  + +     V+D+N+ G    
Sbjct: 64  LDVRDSKSVAAARERVTE--GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRM 121
Query: 143 TQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
            Q           GR++   SV GL+G      Y A+K  + GL +++A       ++++
Sbjct: 122 LQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLS 181
Query: 203 AIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEV 240
            I  G + +              +EK+     G PEEV
Sbjct: 182 LIECGPVHT------------AFMEKV----LGSPEEV 203

>pdb|1A27|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 C-Terminal Deletion Mutant Complexed With Estradiol And Nadp+ Length = 289

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 52/218 (23%), Positives = 86/218 (39%), Gaps = 23/218 (10%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYA-----RSSKEAEEVCKEIEASGGQALTFG 82
           V ++TG S GIG  +A  L     +    YA     ++     E  + +    G   T  
Sbjct: 4   VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQ 63
Query: 83  GDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLC 142
            DV     V +  +   +  G VD+L+ NAG+     L  + +     V+D+N+ G    
Sbjct: 64  LDVRDSKSVAAARERVTE--GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRM 121
Query: 143 TQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
            Q           GR++   SV GL+G      Y A+K  + GL +++A       ++++
Sbjct: 122 LQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLS 181
Query: 203 AIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEV 240
            I  G             +    +EK+     G PEEV
Sbjct: 182 LIECG------------PVHTAFMEKV----LGSPEEV 203

>pdb|2P91|A Chain A, Crystal Structure Of Enoyl-[acyl-Carrier-Protein] Reductase (Nadh) From Aquifex Aeolicus Vf5 Length = 285

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 58/252 (23%), Positives = 115/252 (45%), Gaps = 14/252 (5%)
Query: 24  VEAPVAVVTGAS--RGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTF 81
           +E   A++TG +  R I   +A S  + G ++   YA  + + E+  +EI    G  L  
Sbjct: 19  LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYA--TPKLEKRVREIAKGFGSDLVV 76
Query: 82  GGDVSKEADVESMIKTAVDAWGTVDILINN-AGITRDTL---LMRMKKSQWQDVIDLNLT 137
             DVS + D++++ K   + WG++DI++++ A   ++     ++   +  ++  +D+++ 
Sbjct: 77  KCDVSLDEDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVY 136
Query: 138 GVFLCTQXXXXXXXXXXXGRIINIASVVGLVGNIGQAN-YSAAKAGVIGLTKTVAKEYAS 196
            +   T+           G I+ + S  G    +   N    AKA +    + +A + A 
Sbjct: 137 SLIALTR-ELLPLMEGRNGAIVTL-SYYGAEKVVPHYNVMGIAKAALESTVRYLAYDIAK 194
Query: 197 RNINVNAIAPGFIASDMTAKL-GEDLEKKILEKI-PLGRYGQPEEVAGLVEFLALNPAAG 254
               +NAI+ G + +     + G  L  +   K+ P G+    E+V     FL  + A  
Sbjct: 195 HGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPFGKPITIEDVGDTAVFLCSDWARA 254
Query: 255 YITGQVLTIDGG 266
            ITG+V+ +D G
Sbjct: 255 -ITGEVVHVDNG 265

>pdb|3UCE|A Chain A, Crystal Structure Of A Small-Chain Dehydrogenase In Complex With Nadph Length = 223

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 9/97 (9%)
Query: 177 SAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASD----MTAKLGEDLEKKILEKIPLG 232
           +A  A +   TK +AKE A   I VNAI+PG   ++    M A   + + ++    +P+G
Sbjct: 131 AAINAAIEATTKVLAKELAP--IRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPVG 188
Query: 233 RYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 269
           + G+  ++A    F   N    Y+TG V+ +DGG ++
Sbjct: 189 KVGEASDIAMAYLFAIQNS---YMTGTVIDVDGGALL 222

>pdb|3GEM|A Chain A, Crystal Structure Of Short-Chain Dehydrogenase From Pseudomonas Syringae Length = 260

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/253 (22%), Positives = 98/253 (38%), Gaps = 38/253 (15%)
Query: 26  APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDV 85
           AP+ ++TGAS+ +G   A  L + G +V+++Y    +       E+  +G  AL   GD 
Sbjct: 28  API-LITGASQRVGLHCALRLLEHGHRVIISY----RTEHASVTELRQAGAVALY--GDF 80
Query: 86  SKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQW------------QDVID 133
           S E  + + I        ++  +++NA             S+W                 
Sbjct: 81  SCETGIXAFIDLLKTQTSSLRAVVHNA-------------SEWLAETPGEEADNFTRXFS 127
Query: 134 LNLTGVFLCTQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKE 193
           ++    +L                I++I+  V   G+     Y A KAG+  LT + A  
Sbjct: 128 VHXLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSKHIAYCATKAGLESLTLSFAAR 187
Query: 194 YASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAA 253
           +A   + VN IAP  +      K         L K  LG     E +   + +L     +
Sbjct: 188 FAPL-VKVNGIAPALLX--FQPKDDAAYRANALAKSALGIEPGAEVIYQSLRYLL---DS 241
Query: 254 GYITGQVLTIDGG 266
            Y+TG  LT++GG
Sbjct: 242 TYVTGTTLTVNGG 254

>pdb|1Z6Z|A Chain A, Crystal Structure Of Human Sepiapterin Reductase In Complex With Nadp+ Length = 282

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 89/200 (44%), Gaps = 17/200 (8%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGC--KVLVNYARSSKEAEEVCKEI--EASGGQALTFGG 83
           V ++TGASRG GR +A  L        VLV  AR+ +   ++  E+  E SG + +    
Sbjct: 28  VCLLTGASRGFGRTLAPLLASLLSPGSVLVLSARNDEALRQLEAELGAERSGLRVVRVPA 87
Query: 84  DVSKEADVESM---IKTAVDAWGTVD-ILINNAGITRDT---LLMRMKKSQWQDVIDLNL 136
           D+  EA ++ +   ++      G    +LINNAG   D     +     +Q  +   LNL
Sbjct: 88  DLGAEAGLQQLLGALRELPRPKGLQRLLLINNAGSLGDVSKGFVDLSDSTQVNNYWALNL 147
Query: 137 TGVFLCTQXXXXXXXXXXXG---RIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKE 193
           T + LC             G    ++NI+S+  L    G A Y A KA    L + +A E
Sbjct: 148 TSM-LCLTSSVLKAFPDSPGLNRTVVNISSLCALQPFKGWALYCAGKAARDMLFQVLALE 206
Query: 194 YASRNINVNAIAPGFIASDM 213
               N+ V   APG + +DM
Sbjct: 207 EP--NVRVLNYAPGPLDTDM 224

>pdb|1IOL|A Chain A, Estrogenic 17-beta Hydroxysteroid Dehydrogenase Complexed 17-beta- Estradiol Length = 327

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/218 (23%), Positives = 87/218 (39%), Gaps = 23/218 (10%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYA-----RSSKEAEEVCKEIEASGGQALTFG 82
           V ++TG S GIG  +A  L     +    YA     ++     E  + +    G   T  
Sbjct: 4   VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQ 63
Query: 83  GDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLC 142
            DV     V +  +   +  G VD+L+ NAG+     L  + +     V+++N+ G    
Sbjct: 64  LDVRDSKSVAAARERVTE--GRVDVLVCNAGLGLLGPLEALGEDAVASVLEVNVVGTVRM 121
Query: 143 TQXXXXXXXXXXXGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
            Q           GR++   SV GL+G      Y A+K  + GL +++A       ++++
Sbjct: 122 LQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLS 181
Query: 203 AIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEV 240
            I  G + +              +EK+     G PEEV
Sbjct: 182 LIECGPVHT------------AFMEKV----LGSPEEV 203

>pdb|1N5D|A Chain A, Crystal Structure Of Porcine Testicular Carbonyl Reductase 20beta-Hydroxysteroid Dehydrogenase Length = 288

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/232 (21%), Positives = 88/232 (37%), Gaps = 49/232 (21%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA+VTGA++GIG A+   L +     +V  AR     +   K+++A G        D+  
Sbjct: 6   VALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGLSPRFHQLDIID 65
Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVF-LCTQXX 146
              + ++       +G +D+L+NNA I            Q +  +  N  G   +CT+  
Sbjct: 66  LQSIRALCDFLRKEYGGLDVLVNNAAIAFQLDNPTPFHIQAELTMKTNFMGTRNVCTE-- 123
Query: 147 XXXXXXXXXGRIINIAS---------------------------VVGLVGNI-------- 171
                    GR++N++S                           +VGL+           
Sbjct: 124 -LLPLIKPQGRVVNVSSTEGVRALNECSPELQQKFKSETITEEELVGLMNKFVEDTKNGV 182
Query: 172 ------GQANYSAAKAGVIGLTKTVAK----EYASRNINVNAIAPGFIASDM 213
                   + Y   K GV  L++  A+    + A   I +NA  PG++ +DM
Sbjct: 183 HRKEGWSDSTYGVTKIGVSVLSRIYARKLREQRAGDKILLNACCPGWVRTDM 234

>pdb|2HRB|A Chain A, Crystal Structure Of Human Carbonyl Reductase 3, Complexed With Nadp+ Length = 274

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 53/239 (22%), Positives = 92/239 (38%), Gaps = 57/239 (23%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA+VTGA+RGIG A+A  L +     +V  AR     +   ++++A G        D+  
Sbjct: 4   VALVTGANRGIGLAIARELCRQFSGDVVLTARDVARGQAAVQQLQAEGLSPRFHQLDIDD 63
Query: 88  EADVESMIKTAVDAWGTVDILINNAGI---TRDTLLMRMKKSQWQDVIDLNLTGVFLCTQ 144
              + ++       +G +++L+NNA +   + D +   +K        ++ L   F  T+
Sbjct: 64  LQSIRALRDFLRKEYGGLNVLVNNAAVAFKSDDPMPFDIKA-------EMTLKTNFFATR 116
Query: 145 XX--XXXXXXXXXGRIINIAS---------------------------VVGLVGNI---- 171
                        GR++NI+S                           +V L+       
Sbjct: 117 NMCNELLPIMKPHGRVVNISSLQCLRAFENCSEDLQERFHSETLTEGDLVDLMKKFVEDT 176
Query: 172 --------GQAN--YSAAKAGVIGLTKTVAKEYASR----NINVNAIAPGFIASDMTAK 216
                   G  N  Y  +K GV  L++ +A+    +     I VNA  PG + +DM  K
Sbjct: 177 KNEVHEREGWPNSPYGVSKLGVTVLSRILARRLDEKRKADRILVNACCPGPVKTDMDGK 235

>pdb|1WMA|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Hydroxy-pp Length = 276

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/232 (21%), Positives = 89/232 (38%), Gaps = 49/232 (21%)
Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA+VTG ++GIG A+   L +     +V  AR     +   ++++A G        D+  
Sbjct: 6   VALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDD 65
Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVF-LCTQXX 146
              + ++       +G +D+L+NNAGI            Q +  +  N  G   +CT+  
Sbjct: 66  LQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTE-- 123
Query: 147 XXXXXXXXXGRIINIASV---------------------------VGLVGNI-------- 171
                    GR++N++S+                           VGL+           
Sbjct: 124 -LLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGV 182
Query: 172 ------GQANYSAAKAGVIGLTKTVAKEYASRN----INVNAIAPGFIASDM 213
                   + Y   K GV  L++  A++ + +     I +NA  PG++ +DM
Sbjct: 183 HQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDM 234

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	269
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	1e-151
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	1e-149
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	1e-147
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	1e-147
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	1e-146
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-146
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	1e-146
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	1e-145
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	1e-144
3rih_A	293	Short chain dehydrogenase or reductase; structural	1e-142
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	1e-142
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	1e-142
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	1e-141
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	1e-141
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	1e-141
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	1e-139
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	1e-138
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	1e-138
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	1e-136
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	1e-136
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	1e-135
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	1e-135
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	1e-135
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	1e-135
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	1e-134
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	1e-134
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	1e-134
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	1e-133
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	1e-133
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	1e-132
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	1e-132
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	1e-131
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	1e-131
1xq1_A	266	Putative tropinone reducatse; structural genomics,	1e-129
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	1e-129
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	1e-128
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	1e-128
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	5e-11
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	1e-127
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	1e-127
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-127
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	1e-126
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	1e-126
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	1e-126
3imf_A	257	Short chain dehydrogenase; structural genomics, in	1e-126
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	1e-126
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-125
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	1e-125
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	1e-125
3cxt_A	291	Dehydrogenase with different specificities; rossma	1e-124
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	1e-124
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	1e-124
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	1e-123
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	1e-122
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	1e-122
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	1e-122
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	1e-122
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	1e-121
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	1e-121
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	1e-120
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	1e-120
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	1e-120
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	1e-120
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	1e-119
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	1e-119
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	1e-119
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	1e-119
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	1e-119
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	1e-119
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	1e-119
1xkq_A	280	Short-chain reductase family member (5D234); parra	1e-118
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	1e-118
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	1e-118
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	1e-118
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	1e-117
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	1e-116
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	1e-116
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	1e-116
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	1e-116
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	1e-116
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	1e-116
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	1e-115
1xhl_A	297	Short-chain dehydrogenase/reductase family member	1e-115
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	1e-115
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	1e-115
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	1e-114
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	1e-113
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	1e-113
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	1e-113
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	1e-111
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	1e-111
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	1e-111
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	1e-111
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	1e-110
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-110
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	1e-110
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	1e-109
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	1e-109
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	1e-109
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	1e-109
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	1e-108
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	1e-108
1spx_A	278	Short-chain reductase family member (5L265); paral	1e-108
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	1e-107
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	1e-105
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	1e-105
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	1e-105
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	1e-105
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	1e-105
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	1e-104
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	1e-104
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	1e-103
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	1e-103
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	1e-102
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	1e-102
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	1e-102
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	1e-102
4e4y_A	244	Short chain dehydrogenase family protein; structur	1e-102
4dqx_A	277	Probable oxidoreductase protein; structural genomi	1e-101
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	1e-101
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	1e-101
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	1e-101
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	1e-101
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	1e-101
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	1e-100
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	1e-100
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	4e-99
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	5e-99
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	2e-98
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	5e-98
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	9e-98
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	1e-97
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	3e-97
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	6e-97
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	2e-96
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	8e-96
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	1e-94
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	2e-94
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	2e-93
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	3e-93
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	1e-92
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	4e-84
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	3e-91
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	4e-90
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	3e-89
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	3e-89
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	3e-89
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	3e-88
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	4e-88
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	3e-87
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	5e-87
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	6e-87
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	2e-85
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	4e-85
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	1e-83
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	7e-82
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	1e-81
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	3e-81
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	6e-77
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	8e-75
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	1e-68
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	9e-68
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	7e-64
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	1e-59
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	4e-59
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	1e-58
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	1e-57
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	2e-57
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	1e-54
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	1e-53
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	5e-53
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	3e-52
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	5e-52
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	8e-51
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	2e-49
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	2e-48
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	3e-46
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	2e-44
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	3e-44
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	4e-44
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	7e-38
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	1e-37
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	2e-33
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	1e-31
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	2e-31
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	4e-31
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	2e-30
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	8e-17
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	3e-13
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	6e-13
4alk_A	282	ENR, enoyl-[acyl-carrier-protein] reductase [NADPH	9e-12
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	1e-11
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	2e-11
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	3e-11
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	4e-11
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	4e-11
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	5e-11
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	8e-11
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	1e-10
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	1e-10
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	7e-10
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	7e-09
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-08
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	8e-08
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	3e-07
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	1e-06
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	4e-06
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	1e-05
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	2e-05
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	2e-05
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	8e-05
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	5e-04
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	5e-04

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score =  419 bits (1081), Expect = e-151
 Identities = 199/244 (81%), Positives = 224/244 (91%)

Query: 26  APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDV 85
           +PV VVTGASRGIG+A+A SLGKAGCKVLVNYARS+K AEEV K+IEA GGQA+TFGGDV
Sbjct: 1   SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDV 60

Query: 86  SKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQA 145
           SKEADVE+M+KTA+DAWGT+D+++NNAGITRDTLL+RMKKSQW +VIDLNLTGVFLCTQA
Sbjct: 61  SKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQA 120

Query: 146 AAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIA 205
           A KIMMKK+KGRIINIASVVGL+GNIGQANY+AAKAGVIG +KT A+E ASRNINVN + 
Sbjct: 121 ATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVC 180

Query: 206 PGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDG 265
           PGFIASDMTAKLGED+EKKIL  IPLGR GQPE VAGLVEFLAL+PAA YITGQ  TIDG
Sbjct: 181 PGFIASDMTAKLGEDMEKKILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQAFTIDG 240

Query: 266 GMVM 269
           G+ +
Sbjct: 241 GIAI 244

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score =  416 bits (1073), Expect = e-149
 Identities = 160/261 (61%), Positives = 202/261 (77%), Gaps = 3/261 (1%)

Query: 9   QVATIEQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVC 68
               + + ++  A  +   +A+VTGASRGIGRA+A  L  AG KV VNYA S+  A+EV 
Sbjct: 11  SSGLVPRGSHMTALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVV 70

Query: 69  KEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQW 128
             I A+GG+A     DVS+E++VE++    ++ WG +D+L+NNAGITRDTLL+RMK+  W
Sbjct: 71  AAIAAAGGEAFAVKADVSQESEVEALFAAVIERWGRLDVLVNNAGITRDTLLLRMKRDDW 130

Query: 129 QDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTK 188
           Q V+DLNL GVFLC++AAAKIM+K++ GRIINIASVVG +GN GQANYSAAKAGVIGLTK
Sbjct: 131 QSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAKAGVIGLTK 190

Query: 189 TVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLA 248
           TVAKE ASR I VNA+APGFIA+DMT++L  +   K+LE IPLGRYG+  EVAG+V FLA
Sbjct: 191 TVAKELASRGITVNAVAPGFIATDMTSELAAE---KLLEVIPLGRYGEAAEVAGVVRFLA 247

Query: 249 LNPAAGYITGQVLTIDGGMVM 269
            +PAA YITGQV+ IDGG+VM
Sbjct: 248 ADPAAAYITGQVINIDGGLVM 268

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score =  412 bits (1061), Expect = e-147
 Identities = 123/247 (49%), Positives = 181/247 (73%), Gaps = 1/247 (0%)

Query: 23  NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFG 82
            ++   A+VTG+SRG+G+A+A  LG  G  +++N + +S   +   +E +A+G   +   
Sbjct: 2   QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAK 61

Query: 83  GDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLC 142
           GDV    DVE+M+KTA+DA+G +DIL+NNAGITRDTL+++M +  W DV++ NL   +LC
Sbjct: 62  GDVKNPEDVENMVKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLC 121

Query: 143 TQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
           T+A +KIM+K+K G+IINI S+ G++GN GQANY+A+KAG+IG TK++AKE+A++ I  N
Sbjct: 122 TKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKAGLIGFTKSIAKEFAAKGIYCN 181

Query: 203 AIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLT 262
           A+APG I +DMT  L + +++  L  IPL R+G PEEVA +V FLA +  + YITGQV+ 
Sbjct: 182 AVAPGIIKTDMTDVLPDKVKEMYLNNIPLKRFGTPEEVANVVGFLA-SDDSNYITGQVIN 240

Query: 263 IDGGMVM 269
           IDGG+VM
Sbjct: 241 IDGGLVM 247

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score =  409 bits (1055), Expect = e-147
 Identities = 140/245 (57%), Positives = 183/245 (74%), Gaps = 1/245 (0%)

Query: 25  EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGD 84
           +  VA+VTGASRGIGRA+A  L K G  V+VNYA + ++A EV  EI+  G  A+    D
Sbjct: 3   KGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRAD 62

Query: 85  VSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQ 144
           V+   DV +M+K  VD +G VDIL+NNAG+T+D LLMRMK+ +W  VI+ NL GVFLCT+
Sbjct: 63  VANAEDVTNMVKQTVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTK 122

Query: 145 AAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAI 204
           A ++ MM+++ GRI+NIASVVG+ GN GQANY AAKAGVIGLTKT AKE ASRNI VNAI
Sbjct: 123 AVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGVIGLTKTSAKELASRNITVNAI 182

Query: 205 APGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTID 264
           APGFIA+DMT  L E+++ ++L+ IP  ++G+ +++A  V F A +  + YITGQ L +D
Sbjct: 183 APGFIATDMTDVLDENIKAEMLKLIPAAQFGEAQDIANAVTFFA-SDQSKYITGQTLNVD 241

Query: 265 GGMVM 269
           GGMVM
Sbjct: 242 GGMVM 246

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score =  410 bits (1057), Expect = e-146
 Identities = 127/246 (51%), Positives = 170/246 (69%), Gaps = 2/246 (0%)

Query: 22  QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTF 81
              E  VA+VTGA RGIGR +A  L K+   V +  +R+ K  + V  EI++ G ++  +
Sbjct: 40  YCGENKVALVTGAGRGIGREIAKMLAKSVSHV-ICISRTQKSCDSVVDEIKSFGYESSGY 98

Query: 82  GGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFL 141
            GDVSK+ ++  +I   +     VDIL+NNAGITRD L +RMK  +W+DV+  NL  +F 
Sbjct: 99  AGDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFY 158

Query: 142 CTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINV 201
            TQ  +K M+  + GRIINI+S+VGL GN+GQANYS++KAGVIG TK++AKE ASRNI V
Sbjct: 159 ITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNITV 218

Query: 202 NAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL 261
           NAIAPGFI+SDMT K+ E ++K I+  IP GR G PEEVA L  FL+ +  +GYI G+V 
Sbjct: 219 NAIAPGFISSDMTDKISEQIKKNIISNIPAGRMGTPEEVANLACFLS-SDKSGYINGRVF 277

Query: 262 TIDGGM 267
            IDGG+
Sbjct: 278 VIDGGL 283

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score =  409 bits (1053), Expect = e-146
 Identities = 132/242 (54%), Positives = 176/242 (72%), Gaps = 1/242 (0%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
            A+VTGASRGIGR++A  L + G  V VNYA S ++AE V +EI+A G  +     +V+ 
Sbjct: 6   SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVAD 65

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
             +V++MIK  V  +G++D+L+NNAGITRD LLMRMK+ +W DVID NL GVF C Q A 
Sbjct: 66  ADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKAT 125

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
             M++++ G IIN++SVVG VGN GQANY A KAGVIGLTK+ A+E ASR I VNA+APG
Sbjct: 126 PQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPG 185

Query: 208 FIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM 267
           FI SDMT  L ++L++++L +IPL R+GQ  ++A  V FLA +  A YITGQ + ++GGM
Sbjct: 186 FIVSDMTDALSDELKEQMLTQIPLARFGQDTDIANTVAFLA-SDKAKYITGQTIHVNGGM 244

Query: 268 VM 269
            M
Sbjct: 245 YM 246

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score =  408 bits (1050), Expect = e-146
 Identities = 115/267 (43%), Positives = 166/267 (62%), Gaps = 2/267 (0%)

Query: 3   HAGIRAQVATIEQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSK 62
           H      +    Q      + ++  VA+VTGASRGIGRA+A  L + G  V +  A +  
Sbjct: 5   HHHHMGTLEAQTQGPGSMDKTLDKQVAIVTGASRGIGRAIALELARRGAMV-IGTATTEA 63

Query: 63  EAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMR 122
            AE +    + +G +      +V+    V++++++ +  +G +++L+NNAGIT+D L MR
Sbjct: 64  GAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGALNVLVNNAGITQDQLAMR 123

Query: 123 MKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAG 182
           MK  +W  VID NL  VF  ++A  + MMK + GRI+NI SVVG  GN GQ NY+AAKAG
Sbjct: 124 MKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKAG 183

Query: 183 VIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAG 242
           V G+T+ +A+E  SR I VN +APGFI +DMT  L ++ +  +  +IPLGR G PE++A 
Sbjct: 184 VAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGLPQEQQTALKTQIPLGRLGSPEDIAH 243

Query: 243 LVEFLALNPAAGYITGQVLTIDGGMVM 269
            V FLA +P AGYITG  L ++GGM M
Sbjct: 244 AVAFLA-SPQAGYITGTTLHVNGGMFM 269

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score =  405 bits (1044), Expect = e-145
 Identities = 119/243 (48%), Positives = 171/243 (70%), Gaps = 2/243 (0%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALT-FGGDVS 86
            A++TGASRGIGRA+A  L + G  + ++Y ++ ++AEEV +E    G   +   G ++ 
Sbjct: 3   KALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLL 62

Query: 87  KEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
           +     +++  A +  G +D L+NNAGITRDTLL+RMK   W+ V++ NL+ VF  T+ A
Sbjct: 63  EAEAATALVHQAAEVLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREA 122

Query: 147 AKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
            K+MMK + GRI+NI SVVG++GN GQANY A+KAG+IG T+ VAKEYA R I VNA+AP
Sbjct: 123 VKLMMKARFGRIVNITSVVGILGNPGQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAP 182

Query: 207 GFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGG 266
           GFI ++MT +L +++++  L++IP GR+G+PEEVA  V FL  +  AGYITGQ L +DGG
Sbjct: 183 GFIETEMTERLPQEVKEAYLKQIPAGRFGRPEEVAEAVAFLV-SEKAGYITGQTLCVDGG 241

Query: 267 MVM 269
           +  
Sbjct: 242 LTP 244

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score =  403 bits (1037), Expect = e-144
 Identities = 103/262 (39%), Positives = 149/262 (56%), Gaps = 2/262 (0%)

Query: 9   QVATIEQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVC 68
            + T+E  T          VA VTG   G+G A++  L  AG  V V+++  +       
Sbjct: 8   HMGTLEAQTQGPGSMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWL 67

Query: 69  KEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQW 128
                +G     +  DV+     E   +  +  +G VD+LINNAGITRD   M+M K  W
Sbjct: 68  MHERDAGRDFKAYAVDVADFESCERCAEKVLADFGKVDVLINNAGITRDATFMKMTKGDW 127

Query: 129 QDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTK 188
             V+  +L  +F  T+     M++++ GRI+NI SV G  G  GQANY++AKAG+ G TK
Sbjct: 128 DAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAGIHGFTK 187

Query: 189 TVAKEYASRNINVNAIAPGFIASDMTAKLGED-LEKKILEKIPLGRYGQPEEVAGLVEFL 247
           T+A E A R I VN ++PG++A+ M   + +D LE KIL +IP+GR G+P+EVA L+ FL
Sbjct: 188 TLALETAKRGITVNTVSPGYLATAMVEAVPQDVLEAKILPQIPVGRLGRPDEVAALIAFL 247

Query: 248 ALNPAAGYITGQVLTIDGGMVM 269
             +  AG++TG  L I+GGM M
Sbjct: 248 C-SDDAGFVTGADLAINGGMHM 268

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score =  401 bits (1032), Expect = e-142
 Identities = 89/267 (33%), Positives = 134/267 (50%), Gaps = 2/267 (0%)

Query: 4   AGIRAQVATIEQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKE 63
            G    V + E A  +   ++ A   +VTG ++GIGR +AT   +AG  V V      + 
Sbjct: 19  PGSMLVVESAEPAERKVMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPREL 78

Query: 64  AEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRM 123
           +    +  E   G  +    DVS         +T VDA+G +D++  NAGI  +  L  M
Sbjct: 79  SSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGALDVVCANAGIFPEARLDTM 138

Query: 124 KKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLV-GNIGQANYSAAKAG 182
              Q  +V+D+N+ G     QA    +    +GR+I  +S+ G V G  G ++Y A+KA 
Sbjct: 139 TPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYGASKAA 198

Query: 183 VIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAG 242
            +G  +T A E A R + VNAI PG I ++    +GE+    +   IP+G  G P ++  
Sbjct: 199 QLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMGEEYISGMARSIPMGMLGSPVDIGH 258

Query: 243 LVEFLALNPAAGYITGQVLTIDGGMVM 269
           L  FLA    AGYITGQ + +DGG V+
Sbjct: 259 LAAFLA-TDEAGYITGQAIVVDGGQVL 284

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score =  398 bits (1025), Expect = e-142
 Identities = 112/245 (45%), Positives = 162/245 (66%), Gaps = 1/245 (0%)

Query: 23  NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFG 82
            ++  V++VTG++RGIGRA+A  L  AG  V++      +      +     G +A    
Sbjct: 4   KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVE 63

Query: 83  GDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLC 142
            ++  E  +    +   +    +DIL+NNAGITRD L +RM    W++V+ +NLTG FL 
Sbjct: 64  MNLLSEESINKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLV 123

Query: 143 TQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
           TQ + + M+K++ GRI+NI+SVVG  GN+GQ NYS  KAG+IG TK++AKE A RN+ VN
Sbjct: 124 TQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSLAKELAPRNVLVN 183

Query: 203 AIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLT 262
           A+APGFI +DMTA L E++++K  E+IPLGR+G PEEVA +V FL  +  A YITG+V+ 
Sbjct: 184 AVAPGFIETDMTAVLSEEIKQKYKEQIPLGRFGSPEEVANVVLFLC-SELASYITGEVIH 242

Query: 263 IDGGM 267
           ++GGM
Sbjct: 243 VNGGM 247

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score =  398 bits (1025), Expect = e-142
 Identities = 77/244 (31%), Positives = 131/244 (53%), Gaps = 3/244 (1%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
            A+VTG+SRG+G+A A  L + G  +++NYARS K A E  +EIE  G + L    +V +
Sbjct: 6   CALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQ 65

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
            A ++ M +   + +G +D+ +NNA       +M ++++ W   +++N   +  C Q AA
Sbjct: 66  PAKIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAA 125

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
           K+M K   G I++I+S+  +           +KA +  LT+ +A E + + I VNA++ G
Sbjct: 126 KLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGG 185

Query: 208 FIASDMTAKLG--EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDG 265
            I +D        EDL +   +  P GR  + +++   VEFL  +  A  I GQ + +DG
Sbjct: 186 AIDTDALKHFPNREDLLEDARQNTPAGRMVEIKDMVDTVEFLV-SSKADMIRGQTIIVDG 244

Query: 266 GMVM 269
           G  +
Sbjct: 245 GRSL 248

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score =  396 bits (1021), Expect = e-141
 Identities = 88/242 (36%), Positives = 139/242 (57%), Gaps = 1/242 (0%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           +A VTG   GIG ++   L K G +V+     +S    +  ++ +A G       G+V  
Sbjct: 15  IAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGD 74

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
               +          G +D+L+NNAGITRD +  +M +  WQ VID NLT +F  T+   
Sbjct: 75  WDSTKQAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVI 134

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
             M+++  GRIINI+SV G  G  GQ NYS AKAG+ G T ++A+E A++ + VN ++PG
Sbjct: 135 DGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPG 194

Query: 208 FIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM 267
           +I +DM   +  D+ +KI+  IP+ R G P+E+  +V +LA +  +G+ TG   +++GG+
Sbjct: 195 YIGTDMVKAIRPDVLEKIVATIPVRRLGSPDEIGSIVAWLA-SEESGFSTGADFSLNGGL 253

Query: 268 VM 269
            M
Sbjct: 254 HM 255

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score =  396 bits (1019), Expect = e-141
 Identities = 117/242 (48%), Positives = 157/242 (64%), Gaps = 2/242 (0%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA+VTGASRGIG  VA +L   G  V V  A S   AE+    ++  G +A     ++S 
Sbjct: 7   VALVTGASRGIGFEVAHALASKGATV-VGTATSQASAEKFENSMKEKGFKARGLVLNISD 65

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
              +++           +DIL+NNAGITRD L+MRM + +WQ VI+ NL+ +F  ++   
Sbjct: 66  IESIQNFFAEIKAENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECV 125

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
           + MMKK+ GRII+I SVVG  GN GQ NY AAKAGVIG +K++A E ASRNI VN +APG
Sbjct: 126 RGMMKKRWGRIISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPG 185

Query: 208 FIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM 267
           FIA+DMT KL ++ +  I  KIP G+ G+P+++A  V FLA +  A YITGQ L ++GGM
Sbjct: 186 FIATDMTDKLTDEQKSFIATKIPSGQIGEPKDIAAAVAFLA-SEEAKYITGQTLHVNGGM 244

Query: 268 VM 269
            M
Sbjct: 245 YM 246

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score =  396 bits (1019), Expect = e-141
 Identities = 71/246 (28%), Positives = 122/246 (49%), Gaps = 5/246 (2%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
            A++T  ++G+G+ V   L   G  V V Y   +   E + +  +    +      DV+K
Sbjct: 9   HALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTK 68

Query: 88  EADVESMIKTAVDAWGTVDILINNAG--ITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQA 145
           + D+  +++ A+  +G +D LINNAG  +     L+  ++ +W ++I  NLT VF   + 
Sbjct: 69  KEDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKL 128

Query: 146 AAKIMMKKKKGRIINIA--SVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNA 203
              +M K+  GRIIN          G I ++ ++AAK G++ LTKTVA E A   I  N 
Sbjct: 129 VVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANM 188

Query: 204 IAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTI 263
           + PG I  +M     ++  +      P+GR G  E++A  + FL     +  ITG ++ +
Sbjct: 189 VCPGDIIGEMKEATIQEARQLKEHNTPIGRSGTGEDIARTISFLC-EDDSDMITGTIIEV 247

Query: 264 DGGMVM 269
            G + +
Sbjct: 248 TGAVDV 253

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score =  391 bits (1008), Expect = e-139
 Identities = 122/247 (49%), Positives = 168/247 (68%), Gaps = 5/247 (2%)

Query: 23  NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFG 82
           N+E  VA+VTGASRGIG+A+A  L + G KV +  A S   A+ +   +   G       
Sbjct: 6   NLEGKVALVTGASRGIGKAIAELLAERGAKV-IGTATSESGAQAISDYL---GDNGKGMA 61

Query: 83  GDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLC 142
            +V+    +E+++K   D +G VDIL+NNAGITRD LLMRMK+ +W D+++ NLT +F  
Sbjct: 62  LNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRL 121

Query: 143 TQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
           ++A  + MMKK++GRIIN+ SVVG +GN GQANY+AAKAGVIG TK++A+E ASR + VN
Sbjct: 122 SKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVN 181

Query: 203 AIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLT 262
            +APGFI +DMT  L ++     L ++P GR G P E+A  V FLA +P A YITG+ L 
Sbjct: 182 TVAPGFIETDMTKALNDEQRTATLAQVPAGRLGDPREIASAVAFLA-SPEAAYITGETLH 240

Query: 263 IDGGMVM 269
           ++GGM M
Sbjct: 241 VNGGMYM 247

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score =  389 bits (1002), Expect = e-138
 Identities = 94/245 (38%), Positives = 148/245 (60%), Gaps = 4/245 (1%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           V V+TG+S G+G+++A        KV+VNY     EA  V +EI+  GG+A+   GDV+ 
Sbjct: 9   VVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTV 68

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
           E+DV +++++A+  +G +D++INNAG+        M  S W  VID NLTG FL ++ A 
Sbjct: 69  ESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAI 128

Query: 148 KIMMKKK-KGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
           K  ++   KG +IN++SV   +      +Y+A+K G+  +T+T+A EYA + I VN I P
Sbjct: 129 KYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGP 188

Query: 207 GFIASDMTAKLGEDLEKK--ILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTID 264
           G I + + A+   D E++  +   IP+G  G+PEE+A +  +LA +  A Y+TG  L  D
Sbjct: 189 GAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLA-SSEASYVTGITLFAD 247

Query: 265 GGMVM 269
           GGM +
Sbjct: 248 GGMTL 252

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score =  388 bits (998), Expect = e-138
 Identities = 111/262 (42%), Positives = 154/262 (58%), Gaps = 7/262 (2%)

Query: 10  VATIEQATNEAAQ--NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEV 67
           + T+E  T        +    A+VTGA+ GIG A+A      G  V ++  R  K  +E+
Sbjct: 9   MGTLEAQTQGPGSMFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDK-LKEI 67

Query: 68  CKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQ 127
             ++   G     F  ++S    ++ + + A      +DIL+NNAGITRD L +RM+   
Sbjct: 68  AADL---GKDVFVFSANLSDRKSIKQLAEVAEREMEGIDILVNNAGITRDGLFVRMQDQD 124

Query: 128 WQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLT 187
           W DV+ +NLT     T+     MM+++ GRIINI S+VG+VGN GQ NY AAKAG+IG +
Sbjct: 125 WDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAAKAGLIGFS 184

Query: 188 KTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFL 247
           K +A+E ASRNI VN IAPGFI S MT KL E  ++ I+  IP+ R G  EE+A    +L
Sbjct: 185 KALAQEIASRNITVNCIAPGFIKSAMTDKLNEKQKEAIMAMIPMKRMGIGEEIAFATVYL 244

Query: 248 ALNPAAGYITGQVLTIDGGMVM 269
           A +  A Y+TGQ L I+GGM M
Sbjct: 245 A-SDEAAYLTGQTLHINGGMAM 265

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score =  385 bits (991), Expect = e-136
 Identities = 95/272 (34%), Positives = 142/272 (52%), Gaps = 15/272 (5%)

Query: 11  ATIEQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKE 70
           ++            ++ VA+VTGA+ GIG  +A  LGK G +V V   R  +      KE
Sbjct: 7   SSGLVPRGSHMATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCA-RGEEGLRTTLKE 65

Query: 71  IEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQD 130
           +  +G +A     DV    ++E+++   V+ +G VD+L+NNAG         +    W D
Sbjct: 66  LREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLD 125

Query: 131 VIDLNLTGVFLCTQAAAKI--MMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTK 188
           V++ NLTGVF  T+   K   M+++  GRI+NIAS  G  G +  A YSA+K GV+G TK
Sbjct: 126 VVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTK 185

Query: 189 TVAKEYASRNINVNAIAPGFIASDMTAKL-----------GEDLEKKILEKIPLGRYGQP 237
            +  E A   I VNA+ PGF+ + M A +            E+   +I  ++P+GRY QP
Sbjct: 186 ALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQP 245

Query: 238 EEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 269
            EVA +V +L   P A  +T Q L + GG+  
Sbjct: 246 SEVAEMVAYLI-GPGAAAVTAQALNVCGGLGN 276

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score =  383 bits (986), Expect = e-136
 Identities = 73/251 (29%), Positives = 124/251 (49%), Gaps = 7/251 (2%)

Query: 25  EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGD 84
             PVA+VTG  RGIG  +A +L  +G  + +     ++    V  E+   G + +    D
Sbjct: 28  ARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRAD 87

Query: 85  VSKEADVESMIKTAVDAWGTVDILINNAGITRDT--LLMRMKKSQWQDVIDLNLTGVFLC 142
           ++  +  ++ +   V  +G +D L+NNAGI        + +K   +  ++ +NL G    
Sbjct: 88  LADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFF 147

Query: 143 TQAAAKIMMKKKK---GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNI 199
           TQA  K M+         IINI SV  ++ +  + +Y  +KAG+   ++ +A   A   I
Sbjct: 148 TQAVLKAMLASDARASRSIINITSVSAVMTSPERLDYCMSKAGLAAFSQGLALRLAETGI 207

Query: 200 NVNAIAPGFIASDMTAKLGEDLEKKILEK-IPLGRYGQPEEVAGLVEFLALNPAAGYITG 258
            V  + PG I SDMTA +    +  I    +P+ R+G+PE++  +V  LA     G+ TG
Sbjct: 208 AVFEVRPGIIRSDMTAAVSGKYDGLIESGLVPMRRWGEPEDIGNIVAGLA-GGQFGFATG 266

Query: 259 QVLTIDGGMVM 269
            V+  DGG+ +
Sbjct: 267 SVIQADGGLSI 277

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score =  382 bits (983), Expect = e-135
 Identities = 82/243 (33%), Positives = 124/243 (51%), Gaps = 2/243 (0%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
             VVTG ++GIGR +AT   +AG  V V    ++     V    +   G+ +    DVS 
Sbjct: 12  SVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSD 71

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
            A  +++   AV+ +G +D++  NAG+  D  L  M   Q   +  +N+ G F   QA  
Sbjct: 72  RAQCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACL 131

Query: 148 KIMMKKKKGRIINIASVVGLV-GNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
             ++    GR++  +S+ G + G  G ++Y A KA  +G  +T A E A   I VNAI P
Sbjct: 132 DALIASGSGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMP 191

Query: 207 GFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGG 266
           G I ++   + GE+    +   IP G  G PE++  L  FLA    AGYITGQ + +DGG
Sbjct: 192 GNIMTEGLLENGEEYIASMARSIPAGALGTPEDIGHLAAFLA-TKEAGYITGQAIAVDGG 250

Query: 267 MVM 269
            V+
Sbjct: 251 QVL 253

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score =  381 bits (982), Expect = e-135
 Identities = 102/251 (40%), Positives = 146/251 (58%), Gaps = 11/251 (4%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASG-------GQALT 80
           +A+VTGA  GIGRAV+  L   G  V          A+E  + +   G       G    
Sbjct: 9   LALVTGAGSGIGRAVSVRLAGEGATVAACD-LDRAAAQETVRLLGGPGSKEGPPRGNHAA 67

Query: 81  FGGDVSKEADVESMIKTAVDAWG-TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGV 139
           F  DVS+      +++     +     ++++ AGIT+D  L+ M +  W  VI +NL G 
Sbjct: 68  FQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGT 127

Query: 140 FLCTQAAAKIMMKKK-KGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRN 198
           FL TQAAA+ ++    +G IINI+S+VG VGN+GQ NY+A+KAGVIGLT+T A+E     
Sbjct: 128 FLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAARELGRHG 187

Query: 199 INVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITG 258
           I  N++ PGFIA+ MT K+ + +  KI E IP+G  G PE+VA +V FLA +  +GYITG
Sbjct: 188 IRCNSVLPGFIATPMTQKVPQKVVDKITEMIPMGHLGDPEDVADVVAFLA-SEDSGYITG 246

Query: 259 QVLTIDGGMVM 269
             + + GG+ M
Sbjct: 247 TSVEVTGGLFM 257

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score =  380 bits (979), Expect = e-135
 Identities = 100/256 (39%), Positives = 144/256 (56%), Gaps = 13/256 (5%)

Query: 14  EQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEA 73
             AT  A     +   +VTG +RGIG A+A  L   G KV V +  S             
Sbjct: 3   ATATEGAKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG-------- 54

Query: 74  SGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVID 133
                     DV+    V+       +  G V++L++NAG++ D  LMRM + +++ VI+
Sbjct: 55  ----LFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVIN 110

Query: 134 LNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKE 193
            NLTG F   Q A++ M + K GR+I I SV GL G   QANY+A+KAGVIG+ +++A+E
Sbjct: 111 ANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARE 170

Query: 194 YASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAA 253
            +  N+  N +APG+I +DMT  L E +++  L+ IP  R G P EVAG+V FLA +  A
Sbjct: 171 LSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLA-SEDA 229

Query: 254 GYITGQVLTIDGGMVM 269
            YI+G V+ +DGGM M
Sbjct: 230 SYISGAVIPVDGGMGM 245

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score =  379 bits (976), Expect = e-135
 Identities = 101/255 (39%), Positives = 153/255 (60%), Gaps = 13/255 (5%)

Query: 15  QATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS 74
            ++    ++  +   +VTG +RGIG A+A +   AG KV + Y                 
Sbjct: 10  HSSGLVPRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEG--------- 60

Query: 75  GGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDL 134
               L    D++    VE   K   +  G V++LI NAG+T+D LLMRM +  +  V++ 
Sbjct: 61  ---FLAVKCDITDTEQVEQAYKEIEETHGPVEVLIANAGVTKDQLLMRMSEEDFTSVVET 117

Query: 135 NLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEY 194
           NLTG F   + A + M++ KKGR++ I+SVVGL+G+ GQANY+A+KAG++G  +++A+E 
Sbjct: 118 NLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYAASKAGLVGFARSLAREL 177

Query: 195 ASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAG 254
            SRNI  N +APGF+ +DMT  L ++    I+ ++PLGRY +PEE+A  V FLA +  A 
Sbjct: 178 GSRNITFNVVAPGFVDTDMTKVLTDEQRANIVSQVPLGRYARPEEIAATVRFLA-SDDAS 236

Query: 255 YITGQVLTIDGGMVM 269
           YITG V+ +DGG+ M
Sbjct: 237 YITGAVIPVDGGLGM 251

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score =  378 bits (973), Expect = e-134
 Identities = 74/249 (29%), Positives = 123/249 (49%), Gaps = 7/249 (2%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
             ++TG+S+GIG A A    +AG KV ++  ++    +E    + A GG A  F  D++ 
Sbjct: 9   RVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLAT 68

Query: 88  EADVESMIKTAVDAWGTVDILINNAG-ITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
               + ++   V  +G +D+LINNAG +     L  +  + +  V+D N+  V + T+ A
Sbjct: 69  SEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFA 128

Query: 147 AKIMMKK-----KKGRIINIASVVGLVGN-IGQANYSAAKAGVIGLTKTVAKEYASRNIN 200
              +        +   +I+  S+ G  G   G   Y AAKA +  + K     +    + 
Sbjct: 129 LPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLYGAAKAFLHNVHKNWVDFHTKDGVR 188

Query: 201 VNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQV 260
            N ++PG + +   A   +D+  +I   IP+GR+G  EE+A    F A + A+GYITGQV
Sbjct: 189 FNIVSPGTVDTAFHADKTQDVRDRISNGIPMGRFGTAEEMAPAFLFFASHLASGYITGQV 248

Query: 261 LTIDGGMVM 269
           L I+GG   
Sbjct: 249 LDINGGQYK 257

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score =  377 bits (971), Expect = e-134
 Identities = 79/244 (32%), Positives = 115/244 (47%), Gaps = 6/244 (2%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           +AV+TG + GIGRA+A      G  + +        A E    I   G + LT   DVS+
Sbjct: 9   LAVITGGANGIGRAIAERFAVEGADIAIADLV---PAPEAEAAIRNLGRRVLTVKCDVSQ 65

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
             DVE+  K  +  +G  DIL+NNAGI        +   QW+   ++N+   FL  +A  
Sbjct: 66  PGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFV 125

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
             M +   GRIIN+ S    +      +Y + KA  IG T+ +A +     I VNAIAP 
Sbjct: 126 PGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPS 185

Query: 208 FIASDMTAKLGEDLEKKILEKI--PLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDG 265
            + +  T          +L  +   + R   P ++ G   FLA +  A +ITGQ L +DG
Sbjct: 186 LVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLA-SDDASFITGQTLAVDG 244

Query: 266 GMVM 269
           GMV 
Sbjct: 245 GMVR 248

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score =  377 bits (970), Expect = e-134
 Identities = 89/244 (36%), Positives = 124/244 (50%), Gaps = 7/244 (2%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
            A+VTGA++GIG+A+A  L   G  V+V+       AE       + G +A     D+S 
Sbjct: 8   TALVTGAAQGIGKAIAARLAADGATVIVSDIN----AEGAKAAAASIGKKARAIAADISD 63

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
              V+++        G +DIL+NNA I        +    W+ +ID+NLTG F+ T+A  
Sbjct: 64  PGSVKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGT 123

Query: 148 KIMMKKKK-GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
             M    K GR+I+IAS     G    A Y AAK GVIG T+ +A E    NI  NA+ P
Sbjct: 124 DQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATELGKYNITANAVTP 183

Query: 207 GFIASDMTAKLGEDLEKKILEKI-PLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDG 265
           G I SD       +     +E +  +   GQPE +A +V FLA +  A +ITGQ L +D 
Sbjct: 184 GLIESDGVKASPHNEAFGFVEMLQAMKGKGQPEHIADVVSFLA-SDDARWITGQTLNVDA 242

Query: 266 GMVM 269
           GMV 
Sbjct: 243 GMVR 246

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score =  376 bits (969), Expect = e-133
 Identities = 110/247 (44%), Positives = 159/247 (64%), Gaps = 9/247 (3%)

Query: 23  NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFG 82
           ++    +++TGAS GIG A+A  L K G KV+++ +   K  + +   +           
Sbjct: 11  DLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEK-LKSLGNAL---KDNYTIEV 66

Query: 83  GDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLC 142
            +++ + +  ++I         +DIL+ NAGIT DTL +RMK   +  VID+NL   F+ 
Sbjct: 67  CNLANKEECSNLIS----KTSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFIL 122

Query: 143 TQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
            + A K M++K+ GRIINI+S+VG+ GN GQANY A+KAG+IG+TK+++ E A+R I VN
Sbjct: 123 NREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVATRGITVN 182

Query: 203 AIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLT 262
           A+APGFI SDMT KL E   + I++KIPLG YG PE+VA  V FLA +  A YITGQ L 
Sbjct: 183 AVAPGFIKSDMTDKLNEKQREAIVQKIPLGTYGIPEDVAYAVAFLA-SNNASYITGQTLH 241

Query: 263 IDGGMVM 269
           ++GGM+M
Sbjct: 242 VNGGMLM 248

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score =  377 bits (970), Expect = e-133
 Identities = 94/255 (36%), Positives = 133/255 (52%), Gaps = 15/255 (5%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
            A VTG S GIG AVA +L   G  V    AR +K        + A+G        DV+ 
Sbjct: 26  TAFVTGVSSGIGLAVARTLAARGIAV-YGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTS 84

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
             +V + +  AV+ +G + IL+N+AG         +  + W DV+D NLTGVF  T+   
Sbjct: 85  TDEVHAAVAAAVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVL 144

Query: 148 KI--MMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIA 205
           +   M +   GRI+NIAS  G  G +  A Y+A+K GV+G TK+V  E A   I VNA+ 
Sbjct: 145 RAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGVVGFTKSVGFELAKTGITVNAVC 204

Query: 206 PGFIASDMTAKL-----------GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAG 254
           PG++ + M  ++            +++ ++   KIPLGRY  PEEVAGLV +L    AA 
Sbjct: 205 PGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPEEVAGLVGYLV-TDAAA 263

Query: 255 YITGQVLTIDGGMVM 269
            IT Q L + GG+  
Sbjct: 264 SITAQALNVCGGLGN 278

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score =  373 bits (960), Expect = e-132
 Identities = 99/254 (38%), Positives = 149/254 (58%), Gaps = 4/254 (1%)

Query: 17  TNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGG 76
           + E+  ++   VA+VTGA+ GIGRA+A +  KAG  V+V     S+ AE V   I  +GG
Sbjct: 3   SYESPFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTD-LKSEGAEAVAAAIRQAGG 61

Query: 77  QALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNL 136
           +A+    +V+ E   E++IK A+D +G + +L+NNAG         M  S ++    LNL
Sbjct: 62  KAIGLECNVTDEQHREAVIKAALDQFGKITVLVNNAGGGGPKPF-DMPMSDFEWAFKLNL 120

Query: 137 TGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYAS 196
             +F  +Q AA  M K   G I+NI+S+ G   N+  A+Y ++KA V  LT+ +A +   
Sbjct: 121 FSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFDVGP 180

Query: 197 RNINVNAIAPGFIASDMTAK-LGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGY 255
             I VNAIAPG I +D  A  L  ++E+ +L+  PLGR G+ +++A    FL  +PAA +
Sbjct: 181 MGIRVNAIAPGAIKTDALATVLTPEIERAMLKHTPLGRLGEAQDIANAALFLC-SPAAAW 239

Query: 256 ITGQVLTIDGGMVM 269
           I+GQVLT+ GG V 
Sbjct: 240 ISGQVLTVSGGGVQ 253

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score =  373 bits (959), Expect = e-132
 Identities = 78/250 (31%), Positives = 126/250 (50%), Gaps = 9/250 (3%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
             +VTG +RGIG A   ++  AG  V V Y  ++   E   K  +  G +   +  DVS 
Sbjct: 16  TIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSN 75

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
              V   I+      G +  LI NAG++       +    +  V D+N+ GVF   +A A
Sbjct: 76  TDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVA 135

Query: 148 KIMMKKKK-GRIINIASVVGLV-------GNIGQANYSAAKAGVIGLTKTVAKEYASRNI 199
           K+ ++K++ G I+  +S+   +       G++ Q  Y+++KA    L K +A E+AS  I
Sbjct: 136 KLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGI 195

Query: 200 NVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQ 259
            VNA++PG++ +D TA + + +       IPL R+ QPEE+ G    L  +  A Y+TG 
Sbjct: 196 RVNALSPGYVNTDQTAHMDKKIRDHQASNIPLNRFAQPEEMTGQAILLL-SDHATYMTGG 254

Query: 260 VLTIDGGMVM 269
              IDGG ++
Sbjct: 255 EYFIDGGQLI 264

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score =  370 bits (953), Expect = e-131
 Identities = 97/242 (40%), Positives = 136/242 (56%), Gaps = 8/242 (3%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
             ++TGA+ GIGRA      K G +++          E       A    A     DV+ 
Sbjct: 7   AVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREA------AEAVGAHPVVMDVAD 60

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
            A VE     A+   G +D +++ AGITRD    +M    W+ V+ +NLTG FL  +AA+
Sbjct: 61  PASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAAS 120

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
           + M +K  G I+  AS V L GN+GQANY+A+ AGV+GLT+T+A E     I VN +APG
Sbjct: 121 EAMREKNPGSIVLTASRVYL-GNLGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPG 179

Query: 208 FIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM 267
           FI + MTAK+ E + +K +   PLGR G+P EVA    FL  +  + +ITGQVL +DGG 
Sbjct: 180 FIETRMTAKVPEKVREKAIAATPLGRAGKPLEVAYAALFLL-SDESSFITGQVLFVDGGR 238

Query: 268 VM 269
            +
Sbjct: 239 TI 240

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score =  369 bits (951), Expect = e-131
 Identities = 80/242 (33%), Positives = 127/242 (52%), Gaps = 8/242 (3%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
             +VTGA+ GIGRA      + G  ++            + + + A   +A+    DVS 
Sbjct: 8   TILVTGAASGIGRAALDLFAREGASLVAVDRE----ERLLAEAVAALEAEAIAVVADVSD 63

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
              VE++   A++ +G +  + + AG+    L   +    W+ V+ +NLTG FL  + A 
Sbjct: 64  PKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAG 123

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
           +++ +   G ++   SV GL G  G A+Y+A K GV+GL +T+A E A + + VN + PG
Sbjct: 124 EVLEEG--GSLVLTGSVAGL-GAFGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPG 180

Query: 208 FIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM 267
            I + MTA L     ++ +   PLGR G+PEEVA    FL  +  + YITGQ L +DGG 
Sbjct: 181 LIQTPMTAGLPPWAWEQEVGASPLGRAGRPEEVAQAALFLL-SEESAYITGQALYVDGGR 239

Query: 268 VM 269
            +
Sbjct: 240 SI 241

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score =  366 bits (942), Expect = e-129
 Identities = 81/244 (33%), Positives = 126/244 (51%), Gaps = 4/244 (1%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
             +VTG ++GIG A+       G  +    AR+  E  E   + +  G Q      D S 
Sbjct: 16  TVLVTGGTKGIGHAIVEEFAGFGAVIHTC-ARNEYELNECLSKWQKKGFQVTGSVCDASL 74

Query: 88  EADVESMIKTAVDAWG-TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
             + E +++T    +G  +DILINN G  R    +      +   I  NL   +  +Q A
Sbjct: 75  RPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLA 134

Query: 147 AKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
             ++     G II ++S+ G+V     + YSA K  +  L + +A E+AS  I  NA+AP
Sbjct: 135 HPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIRANAVAP 194

Query: 207 GFIASDMTAKLGEDLEKK-ILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDG 265
             IA+ +   + +D  KK ++ + PLGR+G+PEEV+ LV FL + PAA YITGQ + +DG
Sbjct: 195 AVIATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAFLCM-PAASYITGQTICVDG 253

Query: 266 GMVM 269
           G+ +
Sbjct: 254 GLTV 257

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score =  364 bits (937), Expect = e-129
 Identities = 82/243 (33%), Positives = 133/243 (54%), Gaps = 4/243 (1%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
            A++TGA  GIG+ +A +   AG  V+V+   ++  A  V  EI+  GGQA     D++ 
Sbjct: 13  CAIITGAGAGIGKEIAITFATAGASVVVSD-INADAANHVVDEIQQLGGQAFACRCDITS 71

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
           E ++ ++   A+   G VDIL+NNAG         M  + ++   +LN+   F  +Q  A
Sbjct: 72  EQELSALADFAISKLGKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVA 130

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
             M K   G I+ I S+     NI   +Y+++KA    L + +A +   +NI VN IAPG
Sbjct: 131 PEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPG 190

Query: 208 FIASDMTAK-LGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGG 266
            I +D     +  ++E+K+L+  P+ R GQP+++A    FL  +PAA +++GQ+LT+ GG
Sbjct: 191 AILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLC-SPAASWVSGQILTVSGG 249

Query: 267 MVM 269
            V 
Sbjct: 250 GVQ 252

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score =  364 bits (936), Expect = e-128
 Identities = 64/251 (25%), Positives = 104/251 (41%), Gaps = 17/251 (6%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
            A+VT      G   A  L +AG  V  +   S K+ +E    +EA              
Sbjct: 3   TAIVTNVKHFGGMGSALRLSEAGHTVACHD-ESFKQKDE----LEAFAETY--PQLKPMS 55

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRD-TLLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
           E +   +I+    A+G VD+L++N     +   + +     ++  ++      F    A 
Sbjct: 56  EQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAV 115

Query: 147 AKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
           A  M K+K G II I S          + Y++A+AG   L   ++KE    NI V AI P
Sbjct: 116 ASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGP 175

Query: 207 GFIASDMTAKL--------GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITG 258
            ++ S+ +             +    + +   L R G  +E+  LV FLA + +  Y+TG
Sbjct: 176 NYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLA-SGSCDYLTG 234

Query: 259 QVLTIDGGMVM 269
           QV  + GG  M
Sbjct: 235 QVFWLAGGFPM 245

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score =  371 bits (954), Expect = e-128
 Identities = 93/271 (34%), Positives = 144/271 (53%), Gaps = 10/271 (3%)

Query: 4   AGIRAQVATIEQATNEAAQNVEAP----VAVVTGASRGIGRAVATSLGKAGCKVLVNYAR 59
           A +  QV  +  A +    + + P    VAVVTGA+RGIG  +A    + G  V+     
Sbjct: 187 AYVDGQVFRVGAADSTPPADWDKPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVD 246

Query: 60  SSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG-TVDILINNAGITRDT 118
            +  AE++ +  +  GG ALT   DV+ +  V+ +     +  G  VDIL+NNAGITRD 
Sbjct: 247 GA--AEDLKRVADKVGGTALTL--DVTADDAVDKITAHVTEHHGGKVDILVNNAGITRDK 302

Query: 119 LLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSA 178
           LL  M + +W  VI +NL      T+         + GR+I ++S+ G+ GN GQ NY+ 
Sbjct: 303 LLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYAT 362

Query: 179 AKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPE 238
            KAG+IGL + +A   A + I +NA+APGFI + MT  +     +       L + GQP 
Sbjct: 363 TKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLATREVGRRLNSLFQGGQPV 422

Query: 239 EVAGLVEFLALNPAAGYITGQVLTIDGGMVM 269
           +VA L+ + A +PA+  +TG  + + G  ++
Sbjct: 423 DVAELIAYFA-SPASNAVTGNTIRVCGQAML 452

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score = 61.2 bits (149), Expect = 5e-11
 Identities = 15/130 (11%), Positives = 40/130 (30%), Gaps = 30/130 (23%)

Query: 135 NLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEY 194
            L  ++       + +      R++ + +     G++        +  + G T+++ KE 
Sbjct: 98  GLKELYTFFTPLLRNL--APCARVVVVGTTPAEAGSVHAQ---VVQRALEGFTRSLGKE- 151

Query: 195 ASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAG 254
             R   V+ +                        +          +   + F+ L+  + 
Sbjct: 152 LRRGATVSLVY-----------------------LSADAKPGATGLESTMRFI-LSAKSA 187

Query: 255 YITGQVLTID 264
           Y+ GQV  + 
Sbjct: 188 YVDGQVFRVG 197

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score =  362 bits (931), Expect = e-127
 Identities = 79/278 (28%), Positives = 133/278 (47%), Gaps = 25/278 (8%)

Query: 14  EQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEA 73
                    ++EAP AVVTGA++ IGRA+A  L + G +V+++Y  S++ A  +  E+  
Sbjct: 11  SSGLVPRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNK 70

Query: 74  S-GGQALTFGGDVSKE----ADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKK--- 125
                A+    D++      A  E +I +   A+G  D+L+NNA     T L++      
Sbjct: 71  ERSNTAVVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDN 130

Query: 126 -------SQWQDVIDLNLTGVFLCTQAAAKIMM------KKKKGRIINIASVVGLVGNIG 172
                  +Q  ++I  N    FL T + A+               I+N+   +     + 
Sbjct: 131 SNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMA 190

Query: 173 QANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLG 232
            + Y+  K  ++GLT++ A E A   I VN +APG     +   +GE+ + K   K+PLG
Sbjct: 191 FSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVS--LLPVAMGEEEKDKWRRKVPLG 248

Query: 233 RY-GQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 269
           R     E++A  V FL  + +A YITG ++ +DGG+ +
Sbjct: 249 RREASAEQIADAVIFLV-SGSAQYITGSIIKVDGGLSL 285

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score =  361 bits (928), Expect = e-127
 Identities = 82/246 (33%), Positives = 136/246 (55%), Gaps = 9/246 (3%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           V +VTG+  GIG+A A +L + G  V+V    +++ AE V K+I A GG A++   DVS 
Sbjct: 11  VGIVTGSGGGIGQAYAEALAREGAAVVVAD-INAEAAEAVAKQIVADGGTAISVAVDVSD 69

Query: 88  EADVESMIKTAVDAWGTVDILINNAGI---TRDTLLMRMKKSQWQDVIDLNLTGVFLCTQ 144
               ++M    +  +G +D L+NNA I    +   L+ +    ++  + +NL G   CT+
Sbjct: 70  PESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTR 129

Query: 145 AAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAI 204
           A  K M K+  G I+N +S    +       Y  AK G+ GLT+ +++E   RNI +NAI
Sbjct: 130 AVYKKMTKRGGGAIVNQSSTAAWL---YSNYYGLAKVGINGLTQQLSRELGGRNIRINAI 186

Query: 205 APGFIASDMT-AKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTI 263
           APG I ++       +++   I++ +PL R G P+++ G+  FL  +  A +ITGQ+  +
Sbjct: 187 APGPIDTEANRTTTPKEMVDDIVKGLPLSRMGTPDDLVGMCLFLL-SDEASWITGQIFNV 245

Query: 264 DGGMVM 269
           DGG ++
Sbjct: 246 DGGQII 251

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score =  361 bits (928), Expect = e-127
 Identities = 101/266 (37%), Positives = 152/266 (57%), Gaps = 8/266 (3%)

Query: 4   AGIRAQVATIEQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKE 63
           +G+      +   +          VA+VTGASRGIG A+A  L   G  V++NYA  +  
Sbjct: 9   SGVDLGTENLYFQS----MMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAA 64

Query: 64  AEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRM 123
           AEEV  +IEA+GG+ALT   DVS  A V  +  TA +A+G VD+L+NNAGI   T +   
Sbjct: 65  AEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAET 124

Query: 124 KKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGV 183
             + +  VI +NL G F   + AA+ +  +  GRIIN+++    + +     Y+AAKAGV
Sbjct: 125 GDAVFDRVIAVNLKGTFNTLREAAQRL--RVGGRIINMSTSQVGLLHPSYGIYAAAKAGV 182

Query: 184 IGLTKTVAKEYASRNINVNAIAPGFIASDM-TAKLGEDLEKKILEKIPLGRYGQPEEVAG 242
             +T  ++KE   R+I VNA+APG  A+D+      +++  +  +  PL R G P+++AG
Sbjct: 183 EAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDEVRDRFAKLAPLERLGTPQDIAG 242

Query: 243 LVEFLALNPAAGYITGQVLTIDGGMV 268
            V FLA  P   ++ GQVL  +GG++
Sbjct: 243 AVAFLA-GPDGAWVNGQVLRANGGII 267

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score =  358 bits (922), Expect = e-126
 Identities = 78/245 (31%), Positives = 129/245 (52%), Gaps = 7/245 (2%)

Query: 28  VAVVTGAS--RGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGG-QALTFGGD 84
           V VVTGAS  +G+G   A    + G  V + YA  ++ AEE  KE+E + G +A  +   
Sbjct: 22  VVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQ 81

Query: 85  VSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQ 144
           V      E ++K  V  +G +D  I NAG T D+ ++      W  V+ ++L G F C +
Sbjct: 82  VDSYESCEKLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAK 141

Query: 145 AAAKIMMKKKKGRIINIASVVGLVGNI--GQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
           A      ++  G ++  AS+ G + N    Q +Y+ AKAG I + +++A E+      VN
Sbjct: 142 AVGHHFKERGTGSLVITASMSGHIANFPQEQTSYNVAKAGCIHMARSLANEWRDF-ARVN 200

Query: 203 AIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLT 262
           +I+PG+I + ++  + ++ ++     IP+GR G  +E+ G   + A + A+ Y TG  L 
Sbjct: 201 SISPGYIDTGLSDFVPKETQQLWHSMIPMGRDGLAKELKGAYVYFA-SDASTYTTGADLL 259

Query: 263 IDGGM 267
           IDGG 
Sbjct: 260 IDGGY 264

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score =  358 bits (920), Expect = e-126
 Identities = 90/255 (35%), Positives = 142/255 (55%), Gaps = 14/255 (5%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKV-LVNYARSSKEAEEVCKEIEASGGQALTFGGDVS 86
           VA+VTG ++GIGR ++  L   G  + + +  +  ++A E  K IEA+  +A+  G DV+
Sbjct: 4   VAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVT 63

Query: 87  KEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
            +A+ +S I  A +  G  D+L+NNAGI +   L+ + +   + +  +N+  VF   QAA
Sbjct: 64  DKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAA 123

Query: 147 AKIMMK-KKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIA 205
           ++   +   KG+IIN AS+  + G    + YS  K  V GLT+  A+E A +   VNA A
Sbjct: 124 SRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYA 183

Query: 206 PGFIASDMTAKLGEDLE-----------KKILEKIPLGRYGQPEEVAGLVEFLALNPAAG 254
           PG + + M  ++  +L            K+    I LGR   PE+VAGLV FLA +  + 
Sbjct: 184 PGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLVSFLA-SENSN 242

Query: 255 YITGQVLTIDGGMVM 269
           Y+TGQV+ +DGGM+ 
Sbjct: 243 YVTGQVMLVDGGMLY 257

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score =  357 bits (920), Expect = e-126
 Identities = 92/254 (36%), Positives = 134/254 (52%), Gaps = 14/254 (5%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA+VTGA +GIG+A+A  L K G  V +    +   A+ V  EI  +GG A+    DVS 
Sbjct: 4   VALVTGAGQGIGKAIALRLVKDGFAVAIAD-YNDATAKAVASEINQAGGHAVAVKVDVSD 62

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
              V + ++ A    G  D+++NNAG+   T +  +       V ++N+ GV    QAA 
Sbjct: 63  RDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAV 122

Query: 148 KIMMK-KKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
           +   K    G+IIN  S  G VGN   A YS++K  V GLT+T A++ A   I VN   P
Sbjct: 123 EAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCP 182

Query: 207 GFIASDMTAKLGEDLE-----------KKILEKIPLGRYGQPEEVAGLVEFLALNPAAGY 255
           G + + M A++   +             +  ++I LGR  +PE+VA  V +LA +P + Y
Sbjct: 183 GIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLA-SPDSDY 241

Query: 256 ITGQVLTIDGGMVM 269
           +TGQ L IDGGMV 
Sbjct: 242 MTGQSLLIDGGMVF 255

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score =  357 bits (919), Expect = e-126
 Identities = 94/247 (38%), Positives = 140/247 (56%), Gaps = 7/247 (2%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           V ++TG S G+G+ +AT   K G +V++   R+ ++ EE   EIE   GQ LT   DV  
Sbjct: 8   VVIITGGSSGMGKGMATRFAKEGARVVITG-RTKEKLEEAKLEIEQFPGQILTVQMDVRN 66

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
             D++ MI+   + +G +DILINNA          +  + W  VI++ L G F C+QA  
Sbjct: 67  TDDIQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIG 126

Query: 148 KIMMKKK-KGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASR-NINVNAIA 205
           K  ++K  KG IIN+ +        G  + +AAKAGV+ +TKT+A E+  +  I VNAIA
Sbjct: 127 KYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIA 186

Query: 206 PGFIASDMTAK---LGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLT 262
           PG I     A    + E++ K+ ++ +PLGR G PEE+AGL  +L  +  A YI G  +T
Sbjct: 187 PGPIERTGGADKLWISEEMAKRTIQSVPLGRLGTPEEIAGLAYYLC-SDEAAYINGTCMT 245

Query: 263 IDGGMVM 269
           +DGG  +
Sbjct: 246 MDGGQHL 252

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score =  356 bits (917), Expect = e-125
 Identities = 92/265 (34%), Positives = 143/265 (53%), Gaps = 5/265 (1%)

Query: 4   AGIRAQVATIEQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKE 63
           +G+      +   +   + ++    A VTG SRGIG A+A  L   G  V + Y  +++ 
Sbjct: 9   SGVDLGTENLYFQSMMTSISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAER 68

Query: 64  AEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRM 123
           A+ V  EIE +GG+A+    D      +E  I+  V+A G +DIL+N+AGI     L   
Sbjct: 69  AQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEET 128

Query: 124 KKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIAS-VVGLVGNIGQANYSAAKAG 182
             + + +V+ +N    F+  ++A++ +     GRII I S +  LV   G + YSA+KA 
Sbjct: 129 TVADFDEVMAVNFRAPFVAIRSASRHLG--DGGRIITIGSNLAELVPWPGISLYSASKAA 186

Query: 183 VIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAG 242
           + GLTK +A++   R I VN + PG   +DM    G+  E    E+I  G YG+P+++AG
Sbjct: 187 LAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGDHAE-AQRERIATGSYGEPQDIAG 245

Query: 243 LVEFLALNPAAGYITGQVLTIDGGM 267
           LV +LA  P   ++TG  LTIDGG 
Sbjct: 246 LVAWLA-GPQGKFVTGASLTIDGGA 269

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score =  356 bits (915), Expect = e-125
 Identities = 68/269 (25%), Positives = 123/269 (45%), Gaps = 18/269 (6%)

Query: 3   HAGIRAQVATIEQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSK 62
           H          E    ++    +  V V+TGAS+GIG  +  +      +V+        
Sbjct: 5   HHHSSGVDLGTENLYFQSMMRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKP 64

Query: 63  EAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMR 122
            A               T  GD+SK    + +++  ++ +G +D L+NNAG+      + 
Sbjct: 65  SA----------DPDIHTVAGDISKPETADRIVREGIERFGRIDSLVNNAGVFLAKPFVE 114

Query: 123 MKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQAN--YSAAK 180
           M +  +   + +N+ G F  TQ AA  M+K+  G I++I + +     +G  +   S  K
Sbjct: 115 MTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSALASLTK 174

Query: 181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEV 240
            G+  +T+++A E++   + VNA++PG I + M      +    +    P+GR G+  +V
Sbjct: 175 GGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHP---AETHSTLAGLHPVGRMGEIRDV 231

Query: 241 AGLVEFLALNPAAGYITGQVLTIDGGMVM 269
              V +L     AG+ITG++L +DGG   
Sbjct: 232 VDAVLYLE---HAGFITGEILHVDGGQNA 257

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score =  355 bits (913), Expect = e-125
 Identities = 89/248 (35%), Positives = 141/248 (56%), Gaps = 7/248 (2%)

Query: 25  EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGD 84
           + PV +VTG SRGIG AV     + G +V VNYA + + A+ V   I  SGG+A+   GD
Sbjct: 25  DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGD 84

Query: 85  VSKEADVESMIKTAVDAWGTVDILINNAGITR-DTLLMRMKKSQWQDVIDLNLTGVFLCT 143
           V   AD+ +M       +G +D L+NNAGI      +  M   + + ++ +N+TG  LC 
Sbjct: 85  VGNAADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCA 144

Query: 144 QAAAKIMMKKKK---GRIINIASVVGLVGNIGQ-ANYSAAKAGVIGLTKTVAKEYASRNI 199
             A + M +      G I+N++S+  ++G+  Q  +Y+A+KA +   T  +A+E A+  I
Sbjct: 145 AEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYAASKAAIDTFTIGLAREVAAEGI 204

Query: 200 NVNAIAPGFIASDMTAKLG-EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITG 258
            VNA+ PG I +D+ A  G  D  +++   +P+ R G PEEVA  + +L  +P+A Y+TG
Sbjct: 205 RVNAVRPGIIETDLHASGGLPDRAREMAPSVPMQRAGMPEEVADAILYLL-SPSASYVTG 263

Query: 259 QVLTIDGG 266
            +L + GG
Sbjct: 264 SILNVSGG 271

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score =  354 bits (910), Expect = e-124
 Identities = 72/244 (29%), Positives = 121/244 (49%), Gaps = 6/244 (2%)

Query: 28  VAVVTGAS-RGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASG-GQALTFGGDV 85
           V +VT A+  GIG   A      G  V+++     +   E   ++   G G+      DV
Sbjct: 24  VVLVTAAAGTGIGSTTARRALLEGADVVISD-YHERRLGETRDQLADLGLGRVEAVVCDV 82

Query: 86  SKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQA 145
           +    V+++I   V+  G +D+L+NNAG+   T ++ M   +W  V+++ LT V   T+A
Sbjct: 83  TSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRA 142

Query: 146 AAKIMMKKKK-GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAI 204
           A +        G I+N ASV+G      Q++Y+AAKAGV+ LT+  A E     + +NA+
Sbjct: 143 ALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAV 202

Query: 205 APGFIASDMTAKL-GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTI 263
           +P         K    +L  ++      GR  +P EVA  + FLA +  + Y+TG+V+++
Sbjct: 203 SPSIARHKFLEKTSSSELLDRLASDEAFGRAAEPWEVAATIAFLA-SDYSSYMTGEVVSV 261

Query: 264 DGGM 267
               
Sbjct: 262 SSQR 265

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score =  352 bits (907), Expect = e-124
 Identities = 58/249 (23%), Positives = 100/249 (40%), Gaps = 16/249 (6%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           +A+VT A    G A   +L + G  V+ + A  +  AE    E E  G            
Sbjct: 3   IALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGT-------IALA 55

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKS---QWQDVIDLNLTGVFLCTQ 144
           E   E ++   +     +D +++N  I R    + ++ +     + + +       L  Q
Sbjct: 56  EQKPERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQ 115

Query: 145 AAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAI 204
           +A   +       +I I S VG         Y  A+A  + L ++ AK  +   I + AI
Sbjct: 116 SAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPARAATVALVESAAKTLSRDGILLYAI 175

Query: 205 APGFIASDMTAKLG-----EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQ 259
            P F  +             +L +++   +PLGR G+P+E+  L+ FLA +  A  I GQ
Sbjct: 176 GPNFFNNPTYFPTSDWENNPELRERVDRDVPLGRLGRPDEMGALITFLA-SRRAAPIVGQ 234

Query: 260 VLTIDGGMV 268
                GG +
Sbjct: 235 FFAFTGGYL 243

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score =  351 bits (904), Expect = e-123
 Identities = 85/247 (34%), Positives = 139/247 (56%), Gaps = 7/247 (2%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA+VTG ++ IG A  T+L +AG +V++        A +  +++   G    +   DV+ 
Sbjct: 15  VAIVTGGAQNIGLACVTALAEAGARVIIAD-LDEAMATKAVEDLRMEGHDVSSVVMDVTN 73

Query: 88  EADVESMIKTAVDAWGTVDILINNAGIT-RDTLLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
              V++ +++  +  G VDIL+  AGI   +     M   QW   +D+NL G+F   QA 
Sbjct: 74  TESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAV 133

Query: 147 AKIMMKKKKGRIINIASVVGLVGNI--GQANYSAAKAGVIGLTKTVAKEYASRNINVNAI 204
            +IM+++K+G I+ I S+ GL+ N    QA Y+A+KAGV    +++A E+A   I  NA+
Sbjct: 134 GRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAV 193

Query: 205 APGFIASDMTAKLGEDLE--KKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLT 262
           AP +I + +T    E  E     +   P+GR GQP+EVA +V+FLA + AA  +TG ++ 
Sbjct: 194 APTYIETTLTRFGMEKPELYDAWIAGTPMGRVGQPDEVASVVQFLA-SDAASLMTGAIVN 252

Query: 263 IDGGMVM 269
           +D G  +
Sbjct: 253 VDAGFTV 259

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score =  349 bits (898), Expect = e-122
 Identities = 89/280 (31%), Positives = 141/280 (50%), Gaps = 17/280 (6%)

Query: 4   AGIRAQVATIEQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKE 63
               ++   I       + ++E  VA+VTGA RGIGR +A  LG+ GCKV+VNYA S++ 
Sbjct: 7   PRGESKYDAIPGPLGPQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTES 66

Query: 64  AEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRM 123
           AEEV   I+ +G  A     +V    D+  M + AV  +G +DI+ +N+G+     +  +
Sbjct: 67  AEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDV 126

Query: 124 KKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLV-GNIGQANYSAAKAG 182
              ++  V  +N  G F   + A K +  +  GR+I + S+ G        A YS +K  
Sbjct: 127 TPEEFDRVFTINTRGQFFVAREAYKHL--EIGGRLILMGSITGQAKAVPKHAVYSGSKGA 184

Query: 183 VIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG-------------EDLEKKILEKI 229
           +    + +A + A + I VN +APG I +DM   +              E  E   ++  
Sbjct: 185 IETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWS 244

Query: 230 PLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 269
           PL R G P ++A +V FLA +   G++TG+V+ IDGG  M
Sbjct: 245 PLRRVGLPIDIARVVCFLA-SNDGGWVTGKVIGIDGGACM 283

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score =  348 bits (895), Expect = e-122
 Identities = 82/245 (33%), Positives = 127/245 (51%), Gaps = 7/245 (2%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
             VV GA R IGRA A    + G  V++ Y  +++ A     EIE  G  AL    D++ 
Sbjct: 10  TIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTN 69

Query: 88  EADVESMIKTAVDAWGTVDILINNAG-ITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
            A+VE+ I  A D +G +  L++ AG +     +  M ++ W  V+D+NLT +FL  + A
Sbjct: 70  AAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTA 129

Query: 147 AKIMMKKKKGRIINIASVVGLVGNI-GQANYSAAKAGVIGLTKTVAKEYASRNINVNAIA 205
              M   K G I+  +S  G  G   G   Y+ +K  V+  T+ +AKE   + I VNA+ 
Sbjct: 130 LPKMA--KGGAIVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGLAKEVGPK-IRVNAVC 186

Query: 206 PGFIASDMTAKLGE-DLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTID 264
           PG I++       + ++ +++     L R G  E+VAGLV FLA +  A Y+TG    I+
Sbjct: 187 PGMISTTFHDTFTKPEVRERVAGATSLKREGSSEDVAGLVAFLA-SDDAAYVTGACYDIN 245

Query: 265 GGMVM 269
           GG++ 
Sbjct: 246 GGVLF 250

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score =  349 bits (897), Expect = e-122
 Identities = 75/275 (27%), Positives = 134/275 (48%), Gaps = 25/275 (9%)

Query: 17  TNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS-G 75
              + +  E P AV+TG +R IG ++A  L + G +V+V+Y  S   A+ +  E+ A+  
Sbjct: 2   NETSHEASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARA 61

Query: 76  GQALTFGGDVSKEADV----ESMIKTAVDAWGTVDILINNAGITRDTLLM---------- 121
           G A+   GD+S  + +    E +I  +  A+G  D+L+NNA     T L+          
Sbjct: 62  GSAVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAAD 121

Query: 122 -RMKKSQWQDVIDLNLTGVFLCTQAAAKIM-----MKKKKGRIINIASVVGLVGNIGQAN 175
            +   +Q  ++   N        +A A+        + +   ++N+   +  +   G   
Sbjct: 122 AKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCV 181

Query: 176 YSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGR-Y 234
           Y+ AK  + GLT+  A E A R+I VNA+APG     +   + ++ +++   K+PLG+  
Sbjct: 182 YTMAKHALGGLTRAAALELAPRHIRVNAVAPGLS--LLPPAMPQETQEEYRRKVPLGQSE 239

Query: 235 GQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 269
               ++A  + FL  +  AGYITG  L +DGG+++
Sbjct: 240 ASAAQIADAIAFLV-SKDAGYITGTTLKVDGGLIL 273

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score =  346 bits (891), Expect = e-122
 Identities = 69/252 (27%), Positives = 107/252 (42%), Gaps = 22/252 (8%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
              VTGA +GIG A A +  +AG KV                          T   DV+ 
Sbjct: 9   NVWVTGAGKGIGYATALAFVEAGAKVTGFDQA-----------FTQEQYPFATEVMDVAD 57

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
            A V  + +  +     +D L+N AGI R     ++ K  WQ    +N+ G F   Q   
Sbjct: 58  AAQVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTM 117

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
               +++ G I+ +AS       IG + Y A+KA +  L  +V  E A   +  N ++PG
Sbjct: 118 NQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPG 177

Query: 208 FIASDMTAKLGED----------LEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYIT 257
              +DM   L               ++    IPLG+  +P+E+A  + FLA +  A +IT
Sbjct: 178 STDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFLA-SDLASHIT 236

Query: 258 GQVLTIDGGMVM 269
            Q + +DGG  +
Sbjct: 237 LQDIVVDGGSTL 248

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score =  347 bits (893), Expect = e-121
 Identities = 97/245 (39%), Positives = 139/245 (56%), Gaps = 6/245 (2%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
            A++TGAS GIG+ VA +  +AG +V V   R S   + V  EI   GG+AL    DV++
Sbjct: 34  RALITGASTGIGKKVALAYAEAGAQVAVAA-RHSDALQVVADEIAGVGGKALPIRCDVTQ 92

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
              V  M+       G +DI + NAGI     ++ M   ++Q + D N+TGVFL  QAAA
Sbjct: 93  PDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAA 152

Query: 148 KIMMK-KKKGRIINIASVVGLVGNIGQ--ANYSAAKAGVIGLTKTVAKEYASRNINVNAI 204
           + M+     G II  AS+ G + NI Q  ++Y  +KA V+ LTK +A E A   I VN++
Sbjct: 153 RAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSV 212

Query: 205 APGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTID 264
           +PG+I +++   L  D       KIPLGR G+PEE+ GL  +LA + A+ Y+TG  + ID
Sbjct: 213 SPGYIRTELVEPL-ADYHALWEPKIPLGRMGRPEELTGLYLYLA-SAASSYMTGSDIVID 270

Query: 265 GGMVM 269
           GG   
Sbjct: 271 GGYTC 275

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score =  345 bits (887), Expect = e-121
 Identities = 87/254 (34%), Positives = 132/254 (51%), Gaps = 17/254 (6%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
            A+VTG S+GIG A+A +L KAG  V +        A+ V   +            DV+K
Sbjct: 14  KAIVTGGSKGIGAAIARALDKAGATVAIAD-LDVMAAQAVVAGL---ENGGFAVEVDVTK 69

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
            A V++ ++ A+DA G  D+L  NAG++     + +   +W    D+N  GVFL  Q A 
Sbjct: 70  RASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIAC 129

Query: 148 KIMMKKKK-GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
           +  +     G I+N AS+   VG    A+YSA+K  V G T+ +A+E A +NI VN + P
Sbjct: 130 RHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCP 189

Query: 207 GFIASDMT-----------AKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGY 255
           GF+ + M                E +  + +   PLGR  +PE+VA +V FLA + AA +
Sbjct: 190 GFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVVVFLA-SDAARF 248

Query: 256 ITGQVLTIDGGMVM 269
           +TGQ + + GG+ M
Sbjct: 249 MTGQGINVTGGVRM 262

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score =  345 bits (888), Expect = e-120
 Identities = 81/251 (32%), Positives = 132/251 (52%), Gaps = 12/251 (4%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS-----GGQALTFG 82
           VA+VTG + GIG+A+   L + G  V++   R  +  +    E++A+       + +   
Sbjct: 20  VAIVTGGATGIGKAIVKELLELGSNVVIAS-RKLERLKSAADELQANLPPTKQARVIPIQ 78

Query: 83  GDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLC 142
            ++  E +V +++K+ +D +G ++ L+NN G    +    +    W  V++ NLTG F  
Sbjct: 79  CNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYM 138

Query: 143 TQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
            +A     MK+  G I+NI  V    G     +  AA+AGV  LTK++A E+A   I +N
Sbjct: 139 CKAVYSSWMKEHGGSIVNI-IVPTKAGFPLAVHSGAARAGVYNLTKSLALEWACSGIRIN 197

Query: 203 AIAPGFIASDMTAK----LGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITG 258
            +APG I S    +     G+   +   +KIP  R G PEEV+ +V FL  +PAA +ITG
Sbjct: 198 CVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLL-SPAASFITG 256

Query: 259 QVLTIDGGMVM 269
           Q + +DGG  +
Sbjct: 257 QSVDVDGGRSL 267

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score =  342 bits (879), Expect = e-120
 Identities = 73/246 (29%), Positives = 127/246 (51%), Gaps = 8/246 (3%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
            A+VTG SRGIG  +   L   G  V    +R+ KE  +   +  + G +      D+S 
Sbjct: 11  TALVTGGSRGIGYGIVEELASLGASVYTC-SRNQKELNDCLTQWRSKGFKVEASVCDLSS 69

Query: 88  EADVESMIKTAVDAW-GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
            ++ + ++ T  + + G ++IL+NNAGI             +  ++ +N    +  +  A
Sbjct: 70  RSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLA 129

Query: 147 AKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
              +   ++G ++ I+SV G +    +A Y A K  +  LT+ +A E+A  NI VN + P
Sbjct: 130 HPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGP 189

Query: 207 GFIASDMTAKLGEDLE-----KKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL 261
           G IA+ +     +D E      K++++  L R G+P+E+A +V FL   PAA Y+TGQ++
Sbjct: 190 GVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCF-PAASYVTGQII 248

Query: 262 TIDGGM 267
            +DGG+
Sbjct: 249 YVDGGL 254

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score =  342 bits (880), Expect = e-120
 Identities = 81/275 (29%), Positives = 136/275 (49%), Gaps = 17/275 (6%)

Query: 8   AQVATIEQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEV 67
                     ++A++ +   VA+ TGA RGIGR +A  LG+ G  V+VNY  SSK AEEV
Sbjct: 3   PSADITSSGPSDASKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEV 62

Query: 68  CKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQ 127
             E++  G Q +    D+SK ++V ++   AV  +G +D +++N+G+      + + +  
Sbjct: 63  VAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQEL 122

Query: 128 WQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVG-LVGNIGQANYSAAKAGVIGL 186
           +  V +LN  G F   Q   K    ++ GRII  +S+   + G    A Y+ +KA V G 
Sbjct: 123 FDKVFNLNTRGQFFVAQQGLKHC--RRGGRIILTSSIAAVMTGIPNHALYAGSKAAVEGF 180

Query: 187 TKTVAKEYASRNINVNAIAPGFIASDMTAKLG-------------EDLEKKILEKIPLGR 233
            +  A +  ++ + VN IAPG + +DM  +               E +++ +    PL R
Sbjct: 181 CRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKR 240

Query: 234 YGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMV 268
            G P ++   V  L     + +I GQV+ + GG +
Sbjct: 241 IGYPADIGRAVSALC-QEESEWINGQVIKLTGGGI 274

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score =  342 bits (879), Expect = e-120
 Identities = 58/245 (23%), Positives = 109/245 (44%), Gaps = 7/245 (2%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNY--ARSSKEAEEVCKEIEASGGQALTFGGDV 85
           V V+ G  + +G   A +       ++++Y  A+ S  A ++  E+E  G +   +  D+
Sbjct: 13  VIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDL 72

Query: 86  SKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQA 145
           S E +V  +   A   +G VDI IN  G      ++   ++++  +  +N    +   + 
Sbjct: 73  SNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQ 132

Query: 146 AAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIA 205
           AAK M     G II IA+ +        + Y+  KA V   T+  +KE   + I+VNAIA
Sbjct: 133 AAKHMN--PNGHIITIATSLLAAYTGFYSTYAGNKAPVEHYTRAASKELMKQQISVNAIA 190

Query: 206 PGFIASDMTAKL-GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTID 264
           PG + +        ++       +    +  + E++A +++FL       +I GQ +  +
Sbjct: 191 PGPMDTSFFYGQETKESTAFHKSQAMGNQLTKIEDIAPIIKFLT--TDGWWINGQTIFAN 248

Query: 265 GGMVM 269
           GG   
Sbjct: 249 GGYTT 253

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score =  342 bits (879), Expect = e-119
 Identities = 89/255 (34%), Positives = 135/255 (52%), Gaps = 14/255 (5%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEA-SGGQALTFGGDVS 86
            AV+TG++ GIG A+A +L KAG  +++N   +  E   V  E+   S G  L    D++
Sbjct: 27  TAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMT 86

Query: 87  KEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
           K +++  M+    D +G  DIL+NNAG+     +      QW  +I +NL+  F   + A
Sbjct: 87  KPSEIADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGA 146

Query: 147 AKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
              M KK  GRIINIAS  GLV +  ++ Y AAK G++GLTKTVA E A   + VN+I P
Sbjct: 147 IPPMKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICP 206

Query: 207 GFIASDMTAKLGED------------LEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAG 254
           G++ + +  K   D            + + +L+  P  ++   E+VA L  +LA    A 
Sbjct: 207 GYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQVASLALYLA-GDDAA 265

Query: 255 YITGQVLTIDGGMVM 269
            ITG  +++DGG   
Sbjct: 266 QITGTHVSMDGGWTA 280

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score =  341 bits (877), Expect = e-119
 Identities = 95/255 (37%), Positives = 136/255 (53%), Gaps = 14/255 (5%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS-GGQALTFGGDVS 86
           VAVVTG++ GIG  +AT+L   G  +++N    + E E+V   + A  G + L  G D+S
Sbjct: 6   VAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLS 65

Query: 87  KEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
           K   V  ++  AV   G +DIL+NNAGI    L+      +W  ++ LNL+ VF  T AA
Sbjct: 66  KGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAA 125

Query: 147 AKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
              M K+  GRIINIAS  GLV +  ++ Y AAK GV+G TK  A E A + I  NAI P
Sbjct: 126 LPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICP 185

Query: 207 GFIASDMTAKLGED------------LEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAG 254
           G++ + +  K                  + + EK P  ++  PE++ G   FLA + AA 
Sbjct: 186 GWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLA-SDAAA 244

Query: 255 YITGQVLTIDGGMVM 269
            ITG  +++DGG   
Sbjct: 245 QITGTTVSVDGGWTA 259

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score =  341 bits (877), Expect = e-119
 Identities = 70/256 (27%), Positives = 107/256 (41%), Gaps = 16/256 (6%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEA--SGGQALTFGGDV 85
           VAVVTG S GIG A    L +AG  V    AR  +        +     G +      DV
Sbjct: 10  VAVVTGGSSGIGLATVELLLEAGAAVAFC-ARDGERLRAAESALRQRFPGARLFASVCDV 68

Query: 86  SKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQA 145
                V +  +      G   IL+NNAG  R +         W + + L    V    +A
Sbjct: 69  LDALQVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRA 128

Query: 146 AAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIA 205
               +  +    I+ + S++           SAA+AGV  L +++A E+A + + VN I 
Sbjct: 129 FLPQLESRADAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSMAFEFAPKGVRVNGIL 188

Query: 206 PGFIASDMTAKLGEDLEKK------------ILEKIPLGRYGQPEEVAGLVEFLALNPAA 253
            G + S    +  E  E++              ++IPLGR G+P E A  + FLA +P +
Sbjct: 189 IGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAARAILFLA-SPLS 247

Query: 254 GYITGQVLTIDGGMVM 269
            Y TG  + + GG+  
Sbjct: 248 AYTTGSHIDVSGGLSR 263

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score =  341 bits (877), Expect = e-119
 Identities = 83/246 (33%), Positives = 128/246 (52%), Gaps = 7/246 (2%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA VTG+S GIG AVA +  +AG  V + Y  S    E+     +  G  +  +  ++S 
Sbjct: 36  VASVTGSSGGIGWAVAEAYAQAGADVAIWY-NSHPADEKAEHLQKTYGVHSKAYKCNISD 94

Query: 88  EADVESMIKTAVDAWGTVDILINNAGIT--RDTLLMRMKKSQWQDVIDLNLTGVFLCTQA 145
              VE  I      +GT+D+ + NAG+T  +   +       W  +I ++L GV+ C+  
Sbjct: 95  PKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHN 154

Query: 146 AAKIMMKKKKGRIINIASVVGLVGNIG--QANYSAAKAGVIGLTKTVAKEYASRNINVNA 203
             KI  K  KG +I  +S+ G + NI   QA Y+ AKA    L K++A E+A     VN 
Sbjct: 155 IGKIFKKNGKGSLIITSSISGKIVNIPQLQAPYNTAKAACTHLAKSLAIEWAPF-ARVNT 213

Query: 204 IAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTI 263
           I+PG+I +D+T    +D++ K  +  PLGR G  +E+ G   +LA + A+ + TG  + I
Sbjct: 214 ISPGYIDTDITDFASKDMKAKWWQLTPLGREGLTQELVGGYLYLA-SNASTFTTGSDVVI 272

Query: 264 DGGMVM 269
           DGG   
Sbjct: 273 DGGYTC 278

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score =  340 bits (874), Expect = e-119
 Identities = 91/253 (35%), Positives = 131/253 (51%), Gaps = 15/253 (5%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
            A+VTG++ GIG  +A  L +AG  +++N      +      EI   G +A+    D+S 
Sbjct: 6   TALVTGSTSGIGLGIAQVLARAGANIVLNGFG---DPAPALAEIARHGVKAVHHPADLSD 62

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
            A +E++   A   +G VDIL+NNAGI     + +     W  +I LNL+ VF  T+ A 
Sbjct: 63  VAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLAL 122

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
             M  +  GRIINIASV GLVG+ G+A Y AAK GV+GLTK V  E A+ N+  NAI PG
Sbjct: 123 PGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPG 182

Query: 208 FIASDMTAKLGED-----------LEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYI 256
           ++ + +  K  +D               + EK P   +  PE +  LV FL  + A   +
Sbjct: 183 WVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELVLFLC-SEAGSQV 241

Query: 257 TGQVLTIDGGMVM 269
            G    +DGG + 
Sbjct: 242 RGAAWNVDGGWLA 254

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score =  340 bits (874), Expect = e-119
 Identities = 75/245 (30%), Positives = 125/245 (51%), Gaps = 5/245 (2%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA+VT ++ GIG A+A  L + G  V+V+  R  +  +     ++  G         V K
Sbjct: 16  VALVTASTDGIGLAIARRLAQDGAHVVVSS-RKQENVDRTVATLQGEGLSVTGTVCHVGK 74

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDT-LLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
             D E ++  AV+  G VDIL++NA +      ++   +  W  ++ +N+    L T+A 
Sbjct: 75  AEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAV 134

Query: 147 AKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
              M K+  G ++ ++SV           Y+ +K  ++GLTK +A E A RNI VN +AP
Sbjct: 135 VPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAP 194

Query: 207 GFIASDMTAKLGED--LEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTID 264
           G I ++ +  L  D   ++ + E + + R G PE+ AG+V FL  +  A YITG+ + + 
Sbjct: 195 GLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLC-SEDASYITGETVVVG 253

Query: 265 GGMVM 269
           GG   
Sbjct: 254 GGTAS 258

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score =  342 bits (878), Expect = e-119
 Identities = 73/284 (25%), Positives = 117/284 (41%), Gaps = 42/284 (14%)

Query: 25  EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS-GGQALTFGG 83
             PVA+VTGA++ +GR++A  L   G  V ++Y RS+ EA  +   + A     A+T   
Sbjct: 45  TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQA 104

Query: 84  DVSKEAD-----------------VESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKS 126
           D+S  A                     ++      WG  D+L+NNA     T L+R  + 
Sbjct: 105 DLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDED 164

Query: 127 QWQ--------------DVIDLNLTGVFLCTQAAAKIMM------KKKKGRIINIASVVG 166
             +              D+   N    +   +A A  +       +     IIN+   + 
Sbjct: 165 GHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMT 224

Query: 167 LVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKIL 226
               +G   Y+ AK  + GLT++ A E A   I VN + PG     +   +   + +   
Sbjct: 225 NQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLS--VLVDDMPPAVWEGHR 282

Query: 227 EKIPL-GRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 269
            K+PL  R     EV+ +V FL  +  A YITG  + +DGG  +
Sbjct: 283 SKVPLYQRDSSAAEVSDVVIFLC-SSKAKYITGTCVKVDGGYSL 325

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score =  339 bits (871), Expect = e-118
 Identities = 75/259 (28%), Positives = 120/259 (46%), Gaps = 19/259 (7%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASG---GQALTFGGD 84
             ++TG+S GIGR  A    + G  V +   RSS+  EE  + I  SG    Q  +   D
Sbjct: 8   TVIITGSSNGIGRTTAILFAQEGANVTITG-RSSERLEETRQIILKSGVSEKQVNSVVAD 66

Query: 85  VSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQ----WQDVIDLNLTGVF 140
           V+ E   + +I + +  +G +D+L+NNAG             Q    +   + LNL  V 
Sbjct: 67  VTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVI 126

Query: 141 LCTQAAAKIMMKKKKGRIINIASVV-GLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNI 199
             T+      +   KG I+N++S+V G         Y+ AKA +   T++ A + A   I
Sbjct: 127 EMTKKVKP-HLVASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAKFGI 185

Query: 200 NVNAIAPGFIASDMTAKLGEDLE---------KKILEKIPLGRYGQPEEVAGLVEFLALN 250
            VN+++PG + +  T  +G   +             E IP+G  G+PE +A ++ FLA  
Sbjct: 186 RVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILFLADR 245

Query: 251 PAAGYITGQVLTIDGGMVM 269
             + YI GQ +  DGG  +
Sbjct: 246 NLSFYILGQSIVADGGTSL 264

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score =  337 bits (867), Expect = e-118
 Identities = 79/246 (32%), Positives = 134/246 (54%), Gaps = 15/246 (6%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
            A+VTG SRGIGRA+A +L   G +V +      + A+ +          A+    D+ K
Sbjct: 4   KALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSL---------GAVPLPTDLEK 54

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
           + D + ++K A++A G + +L++ A +      + +   +W+ V+ L+L   FL  QAAA
Sbjct: 55  D-DPKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAA 113

Query: 148 KIMMKKKKGRIINIASVVGLV--GNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIA 205
             M +   GR++ I SV      G +    Y+ AK  ++GLT+ +AKE+A   I VN + 
Sbjct: 114 PHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLC 173

Query: 206 PGFIASDMTAKLGEDLE--KKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTI 263
           PG++ ++ T  L ++ E  + I  +IP+GR+ +PEE+A +   L     A Y+TGQ + +
Sbjct: 174 PGYVETEFTLPLRQNPELYEPITARIPMGRWARPEEIARVAAVLC-GDEAEYLTGQAVAV 232

Query: 264 DGGMVM 269
           DGG + 
Sbjct: 233 DGGFLA 238

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score =  337 bits (868), Expect = e-118
 Identities = 76/247 (30%), Positives = 127/247 (51%), Gaps = 7/247 (2%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           V +VTGA  GIGRA+A         V V          ++ +E+   G + L    DVSK
Sbjct: 9   VVIVTGAGSGIGRAIAKKFALNDSIV-VAVELLEDRLNQIVQELRGMGKEVLGVKADVSK 67

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRD-TLLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
           + DVE  ++   + +  +D+L NNAGI    T +  +    W+ V+ +NL   F  ++A 
Sbjct: 68  KKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAV 127

Query: 147 AKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
             IM+K+ KG I+N AS+ G+ G    A Y+ AK G+IGLT+++A  Y  + I   A+ P
Sbjct: 128 IPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLP 187

Query: 207 GFIASDMTAKLGEDLEKKILE----KIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLT 262
           G + +++     +  E  +           R  +PE++A ++ FLA +  A ++ G  + 
Sbjct: 188 GTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVIVFLA-SDEASFVNGDAVV 246

Query: 263 IDGGMVM 269
           +DGG+ +
Sbjct: 247 VDGGLTV 253

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score =  338 bits (869), Expect = e-118
 Identities = 73/284 (25%), Positives = 117/284 (41%), Gaps = 42/284 (14%)

Query: 25  EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS-GGQALTFGG 83
             PVA+VTGA++ +GR++A  L   G  V ++Y RS+ EA  +   + A     A+T   
Sbjct: 8   TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQA 67

Query: 84  DVSKEAD-----------------VESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKS 126
           D+S  A                     ++      WG  D+L+NNA     T L+R  + 
Sbjct: 68  DLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDED 127

Query: 127 QWQ--------------DVIDLNLTGVFLCTQAAAKIMM------KKKKGRIINIASVVG 166
             +              D+   N    +   +A A  +       +     IIN+   + 
Sbjct: 128 GHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMT 187

Query: 167 LVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKIL 226
               +G   Y+ AK  + GLT++ A E A   I VN + PG     +   +   + +   
Sbjct: 188 NQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLS--VLVDDMPPAVWEGHR 245

Query: 227 EKIPL-GRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 269
            K+PL  R     EV+ +V FL  +  A YITG  + +DGG  +
Sbjct: 246 SKVPLYQRDSSAAEVSDVVIFLC-SSKAKYITGTCVKVDGGYSL 288

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score =  335 bits (862), Expect = e-117
 Identities = 86/243 (35%), Positives = 136/243 (55%), Gaps = 4/243 (1%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA+VTG SRG+G  +A  L +AGC V+V      + +E   K  E  G + + F  DVS 
Sbjct: 23  VALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSN 82

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
             +V+ +++   + +G +D ++N AGI R          +++ VI++NL G +   + A 
Sbjct: 83  YEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAF 142

Query: 148 KIMMKKKKGRIINIASVVGLVGNI-GQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
            ++ +     IINI S+      +   + Y+A+K GV  LTK +AKE+    I VN IAP
Sbjct: 143 SLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAP 202

Query: 207 GFIASDMTAKLGEDLE--KKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTID 264
           G+  + MT  +  D E    +L++IPLGR G PE++ G+  FLA +  A Y+TGQ++ +D
Sbjct: 203 GWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLA-SEEAKYVTGQIIFVD 261

Query: 265 GGM 267
           GG 
Sbjct: 262 GGW 264

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score =  334 bits (860), Expect = e-116
 Identities = 72/247 (29%), Positives = 124/247 (50%), Gaps = 9/247 (3%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
            A+VTG S+GIG A+   L   G +V    +R+ KE +E  +     G        D+  
Sbjct: 23  TALVTGGSKGIGYAIVEELAGLGARVYTC-SRNEKELDECLEIWREKGLNVEGSVCDLLS 81

Query: 88  EADVESMIKTAVDAW-GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
             + + +++T    + G ++IL+NNAG+          +  +  ++  N    +  +Q A
Sbjct: 82  RTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIA 141

Query: 147 AKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
             ++   + G +I ++S+ G       + YSA+K  +  +TK++A E+A  NI VN++AP
Sbjct: 142 YPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAP 201

Query: 207 GFIASDMTAKLGEDLE------KKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQV 260
           G I + +     +            + K P+GR G+P+EV+ L+ FL   PAA YITGQ+
Sbjct: 202 GVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCF-PAASYITGQI 260

Query: 261 LTIDGGM 267
           +  DGG 
Sbjct: 261 IWADGGF 267

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score =  333 bits (857), Expect = e-116
 Identities = 89/254 (35%), Positives = 134/254 (52%), Gaps = 10/254 (3%)

Query: 23  NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFG 82
           ++   +A+VTG SRGIG+ +A  L +AG +V +  AR ++   +    + A  G      
Sbjct: 26  SLAGRIALVTGGSRGIGQMIAQGLLEAGARVFIC-ARDAEACADTATRLSA-YGDCQAIP 83

Query: 83  GDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLC 142
            D+S EA    + +   +    +DIL+NNAG +    L     S W+ V+ LN+T VF C
Sbjct: 84  ADLSSEAGARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSC 143

Query: 143 TQAAAKIMMK----KKKGRIINIASVVGLVGNIGQA-NYSAAKAGVIGLTKTVAKEYASR 197
            Q    ++ +    +   R+INI SV G+     QA  Y  +KA +  L++ +AKE    
Sbjct: 144 IQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAKELVGE 203

Query: 198 NINVNAIAPGFIASDMTAKLGEDLE--KKILEKIPLGRYGQPEEVAGLVEFLALNPAAGY 255
           +INVN IAPG   S MT  +  D +  +     IP+GR+G+PEE+A L   LA   A  Y
Sbjct: 204 HINVNVIAPGRFPSRMTRHIANDPQALEADSASIPMGRWGRPEEMAALAISLA-GTAGAY 262

Query: 256 ITGQVLTIDGGMVM 269
           +TG V+ IDGG  +
Sbjct: 263 MTGNVIPIDGGFHL 276

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score =  332 bits (855), Expect = e-116
 Identities = 78/254 (30%), Positives = 129/254 (50%), Gaps = 17/254 (6%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
            A++TG++RGIGRA A +  + G  V +      + A +   EI   G  A     DV++
Sbjct: 10  SALITGSARGIGRAFAEAYVREGATVAIAD-IDIERARQAAAEI---GPAAYAVQMDVTR 65

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
           +  +++ I   V+  G +DIL+NNA +     ++ + +  ++ +  +N+ G     QAAA
Sbjct: 66  QDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAA 125

Query: 148 KIMMKK-KKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
           + M+ + + G+IIN+AS  G  G    A Y A KA VI LT++   +     INVNAIAP
Sbjct: 126 RQMIAQGRGGKIINMASQAGRRGEALVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAP 185

Query: 207 GFIASDMTAKL-----------GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGY 255
           G +  +    +             + ++ + E +P GR G  E++ G+  FLA +  + Y
Sbjct: 186 GVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMAIFLA-SAESDY 244

Query: 256 ITGQVLTIDGGMVM 269
           I  Q   +DGG  M
Sbjct: 245 IVSQTYNVDGGNWM 258

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score =  332 bits (854), Expect = e-116
 Identities = 71/245 (28%), Positives = 122/245 (49%), Gaps = 4/245 (1%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
            A++TGA++GIG  +A +   AG +++++    S+         E  G    T   D+++
Sbjct: 22  RALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAE 81

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
                 + + A +A+G +D+L+NNAGI+    ++      +   I +NL    L   A  
Sbjct: 82  PDAPAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVG 141

Query: 148 KIMMKKKK-GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
           K M+   + G II +AS   L        Y  +KAG++  TK +A+E     I  N++ P
Sbjct: 142 KAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCP 201

Query: 207 GFIASDMTAKLGEDLEKK--ILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTID 264
             + ++M  ++  D  K   ++ +IPLGR+  P EV+  V +LA + AA  I G  + +D
Sbjct: 202 TVVLTEMGQRVWGDEAKSAPMIARIPLGRFAVPHEVSDAVVWLA-SDAASMINGVDIPVD 260

Query: 265 GGMVM 269
           GG  M
Sbjct: 261 GGYTM 265

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score =  332 bits (854), Expect = e-116
 Identities = 63/254 (24%), Positives = 117/254 (46%), Gaps = 15/254 (5%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           V V++G    +G  +A    + G  +++   R+ +  E+V K++  +G +AL+ G D++ 
Sbjct: 13  VVVISGVGPALGTTLARRCAEQGADLVLAA-RTVERLEDVAKQVTDTGRRALSVGTDITD 71

Query: 88  EADVESMIKTAVDAWGTVDILINNAG-ITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
           +A V  ++   + A+G VD++INNA  +              +D I+L + G     Q  
Sbjct: 72  DAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGF 131

Query: 147 AKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
               +++ KG ++N+ S+V          Y  AK+ ++ +++T+A E   + I VN++ P
Sbjct: 132 TP-ALEESKGAVVNVNSMVVRHSQAKYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLP 190

Query: 207 GFIASDMTAKLG-----------EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGY 255
           G+I                    ED+         L R    +EVA  + F+A +  A  
Sbjct: 191 GYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASAILFMA-SDLASG 249

Query: 256 ITGQVLTIDGGMVM 269
           ITGQ L ++ G   
Sbjct: 250 ITGQALDVNCGEYK 263

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score =  332 bits (853), Expect = e-116
 Identities = 82/260 (31%), Positives = 132/260 (50%), Gaps = 11/260 (4%)

Query: 3   HAGIRAQVATIEQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSK 62
           H       +      ++   ++   VAVVTGASRGIG A+A  LG  G +V++  AR  +
Sbjct: 6   HHHHHHHSSGHIDDDDKHMSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLT-ARDVE 64

Query: 63  EAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITR-DTLLM 121
           +   V +EI A+GG+A +   D+S    + +     + A G  D+L+NNAG+      L 
Sbjct: 65  KLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLH 124

Query: 122 RMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKA 181
            MK ++W  +I +NL   +L  +A A  M+  K+G IINI+S+ G       A Y+A+K 
Sbjct: 125 TMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKW 184

Query: 182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVA 241
           G+ GL  + A+E     + V+ +APG + ++    L         +K  LG   +P+++A
Sbjct: 185 GLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLSA-------KKSALGA-IEPDDIA 236

Query: 242 GLVEFLALNPAAGYITGQVL 261
            +V  LA   A      +VL
Sbjct: 237 DVVALLA-TQADQSFISEVL 255

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score =  332 bits (854), Expect = e-115
 Identities = 94/273 (34%), Positives = 141/273 (51%), Gaps = 27/273 (9%)

Query: 23  NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYAR-----------SSKEAEEVCKEI 71
           + E   A++TG +RG+GR+ A +L +AG  + +               ++ +  E    +
Sbjct: 7   DFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALV 66

Query: 72  EASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDV 131
           E +G + ++   DV   A +ES +  A D  G +DI I NAGI+   LL  ++ +QW +V
Sbjct: 67  EKTGRRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEV 126

Query: 132 IDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVA 191
           I  NLTG F    A A  M+K+  GRI+ ++S++G   N  QA+Y ++K GVIGLTK  A
Sbjct: 127 IGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQASYVSSKWGVIGLTKCAA 186

Query: 192 KEYASRNINVNAIAPGFIASDMT------AKLGEDLEKKILE---------KIPLGRYGQ 236
            +     I VNA+APG I + MT        +  DLEK  L+          +    + +
Sbjct: 187 HDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQYAPFLK 246

Query: 237 PEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 269
           PEEV   V FL  + A+ +ITG VL ID G   
Sbjct: 247 PEEVTRAVLFLV-DEASSHITGTVLPIDAGATA 278

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score =  332 bits (853), Expect = e-115
 Identities = 76/257 (29%), Positives = 122/257 (47%), Gaps = 17/257 (6%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQA---LTFGGD 84
             ++TG+S GIGR+ A    K G +V +   R+    EE  ++I  +G  A        D
Sbjct: 28  SVIITGSSNGIGRSAAVIFAKEGAQVTITG-RNEDRLEETKQQILKAGVPAEKINAVVAD 86

Query: 85  VSKEADVESMIKTAVDAWGTVDILINNAGITRD--TLLMRMKKSQWQDVIDLNLTGVFLC 142
           V++ +  + +I T +  +G +DIL+NNAG      T         +Q    LN   V   
Sbjct: 87  VTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEM 146

Query: 143 TQAAAKIMMKKKKGRIINIASVV-GLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINV 201
           TQ   +  + K KG I+N++S+V G   + G   Y+ AKA +   T+  A +     + V
Sbjct: 147 TQKTKE-HLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHGVRV 205

Query: 202 NAIAPGFIASDMTAKLG---------EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPA 252
           N+++PG +A+     +G                 E IP+G  G+PEE+A ++ FLA    
Sbjct: 206 NSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLADRNL 265

Query: 253 AGYITGQVLTIDGGMVM 269
           + YI GQ +  DGG  +
Sbjct: 266 SSYIIGQSIVADGGSTL 282

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score =  329 bits (846), Expect = e-115
 Identities = 73/256 (28%), Positives = 123/256 (48%), Gaps = 19/256 (7%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           V +VTGA   IG A A  L + G  + +    + +  E+    +   G +A ++  DV+ 
Sbjct: 9   VCLVTGAGGNIGLATALRLAEEGTAIALLD-MNREALEKAEASVREKGVEARSYVCDVTS 67

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRD-TLLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
           E  V   + + V  +G +D L NNAG       +       +  V+ +N+TG F   +A 
Sbjct: 68  EEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAV 127

Query: 147 AKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
           ++ M+ +  GRI+N AS+ G+ G    A Y  +K  +I LT+T A + A  NI VNAI+P
Sbjct: 128 SRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISP 187

Query: 207 GFIASDMTAKL----------------GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALN 250
           G++      +                  + + ++++  +P+ RYG   E+ G+V FL   
Sbjct: 188 GYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVAFLL-G 246

Query: 251 PAAGYITGQVLTIDGG 266
             + ++TG  L I GG
Sbjct: 247 DDSSFMTGVNLPIAGG 262

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score =  330 bits (848), Expect = e-115
 Identities = 83/268 (30%), Positives = 134/268 (50%), Gaps = 14/268 (5%)

Query: 14  EQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEA 73
           E    ++  N  +PVA++TGA  GIGRA A +L   G  V     R+  E EEV  EI  
Sbjct: 16  ENLYFQSMMNQPSPVALITGAGSGIGRATALALAADGVTVGA-LGRTRTEVEEVADEIVG 74

Query: 74  SGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRD-TLLMRMKKSQWQDVI 132
           +GGQA+    DVS E  + + ++  V  +G +DI++ NAGI      +  +K  +W + I
Sbjct: 75  AGGQAIALEADVSDELQMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETI 134

Query: 133 DLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGL--VGNIGQANYSAAKAGVIGLTKTV 190
            +NL G FL        + ++  G I+ ++S+ G       G   Y+A KA  + + + +
Sbjct: 135 AVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQL 194

Query: 191 AKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEK---------IPLGRYGQPEEVA 241
           A E    +I VNA+ PG I ++++       E++             I  G+ G+ E+VA
Sbjct: 195 ALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVA 254

Query: 242 GLVEFLALNPAAGYITGQVLTIDGGMVM 269
            L+ FL  +  A ++TG  + IDGG  +
Sbjct: 255 ELIRFLV-SERARHVTGSPVWIDGGQGL 281

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score =  326 bits (838), Expect = e-114
 Identities = 87/248 (35%), Positives = 133/248 (53%), Gaps = 14/248 (5%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
             +VTG +RGIGRA+A +  + G  V +   R   E +EV + I  +  Q      D+  
Sbjct: 8   GVLVTGGARGIGRAIAQAFAREGALVALCDLRP--EGKEVAEAIGGAFFQV-----DLED 60

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
           E +    ++ A  A G VD+L+NNA I      + ++  +W+ V+++NLT     +  AA
Sbjct: 61  ERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAA 120

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
           + M K   G I+N+ASV GL      A Y+A+K G++ LT+++A + A   I VNA+APG
Sbjct: 121 REMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPG 180

Query: 208 FIASDMTAKLG------EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL 261
            IA++   +        E   +   +   L R G+PEEVA  V FLA +  A +ITG +L
Sbjct: 181 AIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLA-SEKASFITGAIL 239

Query: 262 TIDGGMVM 269
            +DGGM  
Sbjct: 240 PVDGGMTA 247

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score =  326 bits (838), Expect = e-113
 Identities = 83/253 (32%), Positives = 132/253 (52%), Gaps = 16/253 (6%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA+VTG+ RGIG AVA  LG+ G KV+VNYA S+K+AE+V  EI+A G  A+    D+ +
Sbjct: 20  VALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQ 79

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
             ++  +   AV  +G +DI ++N+G+     L  + + ++  V  LN  G F   + A 
Sbjct: 80  VPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAY 139

Query: 148 KIMMKKKKGRIINIASVVG-LVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
           + +   + GRI+  +S           + YS +K  V    +  +K+   + I VNA+AP
Sbjct: 140 RHLT--EGGRIVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAP 197

Query: 207 GFIASDM------------TAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAG 254
           G   +DM            T+   E  ++      PL R G P++VA +V FL  +    
Sbjct: 198 GGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVANVVGFLV-SKEGE 256

Query: 255 YITGQVLTIDGGM 267
           ++ G+VLT+DGG 
Sbjct: 257 WVNGKVLTLDGGA 269

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score =  325 bits (836), Expect = e-113
 Identities = 53/263 (20%), Positives = 103/263 (39%), Gaps = 13/263 (4%)

Query: 7   RAQVATIEQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEE 66
               +  E    +    + +   ++TGAS+ +G   A  L + G +V+++Y        E
Sbjct: 8   HHHSSGRENLYFQGHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTE 67

Query: 67  VCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKS 126
               +  +G  A+   GD S E  + + I        ++  +++NA           +  
Sbjct: 68  ----LRQAG--AVALYGDFSCETGIMAFIDLLKTQTSSLRAVVHNASEWLAET-PGEEAD 120

Query: 127 QWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGL 186
            +  +  +++   +L       ++   +   I++I+  V   G+     Y A KAG+  L
Sbjct: 121 NFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSKHIAYCATKAGLESL 180

Query: 187 TKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEF 246
           T + A  +A   + VN IAP  +                L K  LG     E +   + +
Sbjct: 181 TLSFAARFAPL-VKVNGIAPALLMFQPKD--DAAYRANALAKSALGIEPGAEVIYQSLRY 237

Query: 247 LALNPAAGYITGQVLTIDGGMVM 269
           L     + Y+TG  LT++GG  +
Sbjct: 238 LL---DSTYVTGTTLTVNGGRHV 257

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score =  325 bits (836), Expect = e-113
 Identities = 89/244 (36%), Positives = 136/244 (55%), Gaps = 6/244 (2%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
            AVVTGA  GIGRA+A    +AG  VL      +   +EV  EI   GG A     D++ 
Sbjct: 33  TAVVTGAGSGIGRAIAHGYARAGAHVLAWG--RTDGVKEVADEIADGGGSAEAVVADLAD 90

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
                ++ +  + A   VD+L+NNAGI        +   +W++V+ +NL   ++ +++  
Sbjct: 91  LEGAANVAE-ELAATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFG 149

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
             M+    GRI+ IAS++   G    A Y+A+K  V+GLT+ +A E+A R + VNA+APG
Sbjct: 150 TAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPG 209

Query: 208 FIASDMTAKLGEDLE--KKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDG 265
           ++ +  TA L  D E   +I  +IP GR+  PE++ G   FLA + AA Y+ GQVL +DG
Sbjct: 210 YVVTANTAALRADDERAAEITARIPAGRWATPEDMVGPAVFLA-SDAASYVHGQVLAVDG 268

Query: 266 GMVM 269
           G + 
Sbjct: 269 GWLA 272

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score =  321 bits (824), Expect = e-111
 Identities = 72/245 (29%), Positives = 119/245 (48%), Gaps = 4/245 (1%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA +TG   GIG  +A    + GC  ++      +      K   A+G + L    DV  
Sbjct: 29  VAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRA 88

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
              V + +  A+  +G +DILIN A          +  + ++ V+D++ +G F  ++   
Sbjct: 89  PPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLY 148

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
           +   +   G I+NI + +G  G   Q +  +AKA V  +T+ +A E+  +NI VN++APG
Sbjct: 149 EKFFRDHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPG 208

Query: 208 FIAS-DMTAKLG--EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTID 264
            I+  +   +LG  +      +   PL R G   E+A  V +LA +P A Y+TG VL  D
Sbjct: 209 PISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVLYLA-SPLASYVTGAVLVAD 267

Query: 265 GGMVM 269
           GG  +
Sbjct: 268 GGAWL 272

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score =  319 bits (820), Expect = e-111
 Identities = 92/243 (37%), Positives = 133/243 (54%), Gaps = 5/243 (2%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
            A+VTG++RG+G A A  L  AG +V++N    +    E    +   G  A     DV+ 
Sbjct: 11  TALVTGSARGLGFAYAEGLAAAGARVILN-DIRATLLAESVDTLTRKGYDAHGVAFDVTD 69

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
           E  +E+           VDILINNAGI     ++ ++   WQ VID NLT  FL +++AA
Sbjct: 70  ELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAA 129

Query: 148 KIMMKKKK-GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
           K M+ +   G+IINI S+         A Y+AAK G+  LT ++A E+A  NI  NAI P
Sbjct: 130 KRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGP 189

Query: 207 GFIASDMTAKLGEDLE--KKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTID 264
           G+I +DM   L ED +    +    P  R+G+PEE+ G   FL+ + A+ YI GQ++ +D
Sbjct: 190 GYILTDMNTALIEDKQFDSWVKSSTPSQRWGRPEELIGTAIFLS-SKASDYINGQIIYVD 248

Query: 265 GGM 267
           GG 
Sbjct: 249 GGW 251

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score =  320 bits (822), Expect = e-111
 Identities = 67/248 (27%), Positives = 117/248 (47%), Gaps = 8/248 (3%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQA---LTFGGD 84
             +VTG   GIG+ VA  L  AG  V++   R+  +     +E+EA G           D
Sbjct: 13  TYLVTGGGSGIGKGVAAGLVAAGASVMIV-GRNPDKLAGAVQELEALGANGGAIRYEPTD 71

Query: 85  VSKEADVESMIKTAVDAWGTVDILINNAGITRDT-LLMRMKKSQWQDVIDLNLTGVFLCT 143
           ++ E +    +       G +  +++ AG + +   + ++    W+  +DLN+ G     
Sbjct: 72  ITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVL 131

Query: 144 QAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNA 203
           + AA+ M++   G  + I+S+     +     Y   K+ V  L +  A E  +  + VN+
Sbjct: 132 KHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQLAADELGASWVRVNS 191

Query: 204 IAPGFIASDMTAKLGEDLE--KKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL 261
           I PG I +D+ A + E  E         PL R G+ E+VA +  FL  + AA ++TGQV+
Sbjct: 192 IRPGLIRTDLVAAITESAELSSDYAMCTPLPRQGEVEDVANMAMFLL-SDAASFVTGQVI 250

Query: 262 TIDGGMVM 269
            +DGG ++
Sbjct: 251 NVDGGQML 258

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score =  319 bits (819), Expect = e-111
 Identities = 80/244 (32%), Positives = 135/244 (55%), Gaps = 9/244 (3%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
            A VTGA  GIG  +  +   +G ++++   R +   +   +E+      A     DV+ 
Sbjct: 13  CAAVTGAGSGIGLEICRAFAASGARLILI-DREAAALDRAAQELG--AAVAARIVADVTD 69

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
              + +      +A   V IL+N+AGI R    +    + W+ V+ +N+ G+F  ++A  
Sbjct: 70  AEAMTAAAA-EAEAVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFG 128

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQ--ANYSAAKAGVIGLTKTVAKEYASRNINVNAIA 205
           + M+ +  G I+N+ S+ G + N  Q  ++Y A+K  V  LT+ +A E+A R + VNA+A
Sbjct: 129 RAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAAEWAGRGVRVNALA 188

Query: 206 PGFIASDMTAKLGEDLE--KKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTI 263
           PG++A++MT K+ E  E  +  L+  P+GR G+P E+A    FLA +PAA Y+TG +L +
Sbjct: 189 PGYVATEMTLKMRERPELFETWLDMTPMGRCGEPSEIAAAALFLA-SPAASYVTGAILAV 247

Query: 264 DGGM 267
           DGG 
Sbjct: 248 DGGY 251

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score =  317 bits (816), Expect = e-110
 Identities = 82/250 (32%), Positives = 129/250 (51%), Gaps = 11/250 (4%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA+VTGASRGIGRA+A  L   G  V ++Y    +EAEE   EI+++GG A + G ++  
Sbjct: 9   VALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLES 68

Query: 88  EADVESMIKTAVDA------WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFL 141
              VE++  +  +           DILINNAGI     +    +  +  ++ +N    F 
Sbjct: 69  LHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFF 128

Query: 142 CTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINV 201
             Q A   +  +   RIINI+S    +       YS  K  +  +T T+AK+  +R I V
Sbjct: 129 IIQQALSRL--RDNSRIINISSAATRISLPDFIAYSMTKGAINTMTFTLAKQLGARGITV 186

Query: 202 NAIAPGFIASDMTAKL--GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQ 259
           NAI PGF+ +DM A+L     +++         R G+ E++A    FLA +P + ++TGQ
Sbjct: 187 NAILPGFVKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLA-SPDSRWVTGQ 245

Query: 260 VLTIDGGMVM 269
           ++ + GG  +
Sbjct: 246 LIDVSGGSCL 255

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score =  318 bits (816), Expect = e-110
 Identities = 65/262 (24%), Positives = 110/262 (41%), Gaps = 4/262 (1%)

Query: 9   QVATIEQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVC 68
           +    +    +   + E  +A+VTG   G+GR +A +L   G  V++   R         
Sbjct: 16  ENLYFQSMMAQGKGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAG 75

Query: 69  KEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTL-LMRMKKSQ 127
           +    +G        DV     V ++       +  +D+L+NNAG     + L  +   Q
Sbjct: 76  EIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQ 135

Query: 128 WQDVIDLNLTGVFLCTQAAAKIMMKK--KKGRIINIASVVGLVGNIGQANYSAAKAGVIG 185
           W  ++  NLTG FLCTQ A ++M  +  + GRIIN  S+         A Y+A K  + G
Sbjct: 136 WNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYTATKHAITG 195

Query: 186 LTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVE 245
           LTK+ A +    +I    I  G  A+DMTA++      +   ++        E +A  V 
Sbjct: 196 LTKSTALDGRMHDIACGQIDIGNAATDMTARMSTG-VLQANGEVAAEPTIPIEHIAEAVV 254

Query: 246 FLALNPAAGYITGQVLTIDGGM 267
           ++A  P +  +    +      
Sbjct: 255 YMASLPLSANVLTMTVMATRMP 276

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score =  316 bits (813), Expect = e-110
 Identities = 86/245 (35%), Positives = 126/245 (51%), Gaps = 6/245 (2%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA+VTGAS G G A+AT     G +V      +    E       A   + L    DV+ 
Sbjct: 4   VAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVAD 63

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRD---TLLMRMKKSQWQDVIDLNLTGVFLCTQ 144
           E DV + I   ++ +G +D+L+NNAGIT +    +L      Q+  V+ +N+ G+FL  +
Sbjct: 64  EGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCR 123

Query: 145 AAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAI 204
           A    M+ +  G I+NIASV  LV   G++ Y+ +K  V+ LTK+VA +YA   I  NA+
Sbjct: 124 AVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAV 183

Query: 205 APGFIASDMTAKLGEDLE--KKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLT 262
            PG I + MT    +  E   ++L +IP    G   +VA  V FLA    A Y+ G  L 
Sbjct: 184 CPGMIETPMTQWRLDQPELRDQVLARIPQKEIGTAAQVADAVMFLA-GEDATYVNGAALV 242

Query: 263 IDGGM 267
           +DG  
Sbjct: 243 MDGAY 247

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score =  316 bits (813), Expect = e-109
 Identities = 65/247 (26%), Positives = 116/247 (46%), Gaps = 7/247 (2%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEA-SGGQALTFGGDVS 86
           VA +TG   G+G+ + T L   G + ++   R     +   ++I + +G +      DV 
Sbjct: 28  VAFITGGGTGLGKGMTTLLSSLGAQCVIAS-RKMDVLKATAEQISSQTGNKVHAIQCDVR 86

Query: 87  KEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
               V++ +   +   G  +I+INNA     +   R+  + W+ + D+ L G    T   
Sbjct: 87  DPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEI 146

Query: 147 AKIMMKKKK-GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIA 205
            K ++K +K    ++I ++    G+      ++AKAGV  ++K++A E+    +  N I 
Sbjct: 147 GKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQ 206

Query: 206 PGFIASDMTAKL---GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLT 262
           PG I +             EK+++ +IP GR G  EE+A L  FL  +  A +I G V+ 
Sbjct: 207 PGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLC-SDYASWINGAVIK 265

Query: 263 IDGGMVM 269
            DGG  +
Sbjct: 266 FDGGEEV 272

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score =  316 bits (813), Expect = e-109
 Identities = 79/269 (29%), Positives = 138/269 (51%), Gaps = 28/269 (10%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKV----------LVNYARSSKE-AEEVCKEIEASGG 76
           VA +TGA+RG GR  A  L + G  +           ++YA+ S E  +E  + +E  G 
Sbjct: 48  VAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGR 107

Query: 77  QALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNL 136
           + +    DV   A +++++  A+  +G +DIL++N GI+    ++ +   QW D++  NL
Sbjct: 108 RIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNL 167

Query: 137 TGVFLCTQAAAKIMMKKKK-GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYA 195
            G +   +A    M+++ + G +I ++S VGL G  GQ++Y+A+K GV GL  ++A E  
Sbjct: 168 IGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASKHGVQGLMLSLANEVG 227

Query: 196 SRNINVNAIAPGFIASDMTA--------------KLGEDLEKKILEKIPLG-RYGQPEEV 240
             NI VN++ PG + ++M                   ED  +   +   L   + +PE+V
Sbjct: 228 RHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLTLLPIPWVEPEDV 287

Query: 241 AGLVEFLALNPAAGYITGQVLTIDGGMVM 269
           +  V +LA +  A YI G  + +DGG + 
Sbjct: 288 SNAVAWLA-SDEARYIHGAAIPVDGGQLA 315

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score =  314 bits (808), Expect = e-109
 Identities = 74/254 (29%), Positives = 118/254 (46%), Gaps = 15/254 (5%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEI-EASGGQALTFGGDVS 86
           VAV+TG+S GIG A+A    K G  +++  AR      E  + + E  G + L    DV+
Sbjct: 9   VAVITGSSSGIGLAIAEGFAKEGAHIVLV-ARQVDRLHEAARSLKEKFGVRVLEVAVDVA 67

Query: 87  KEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
               V++++++   ++G  DIL+NNAG   +  +M     +WQ   +L +       +  
Sbjct: 68  TPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGL 127

Query: 147 AKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
              M  +  G II+ AS+  +     +  Y+  KA ++  +KT+A E    NI VN I P
Sbjct: 128 VPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINP 187

Query: 207 GFIASDMTAKLGEDLEKK------------ILEKIPLGRYGQPEEVAGLVEFLALNPAAG 254
           G I +    K  ++L K               E  P+ R+  PEE+A    FL  +  A 
Sbjct: 188 GLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANFFVFLC-SERAT 246

Query: 255 YITGQVLTIDGGMV 268
           Y  G    +DGGM+
Sbjct: 247 YSVGSAYFVDGGML 260

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score =  314 bits (807), Expect = e-109
 Identities = 72/249 (28%), Positives = 118/249 (47%), Gaps = 20/249 (8%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA+VTGA+ GIG AV T+L  AG +V V                 A     L   GD+ +
Sbjct: 30  VALVTGAAGGIGGAVVTALRAAGARVAVADRA------------VAGIAADLHLPGDLRE 77

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
            A  + +        G +DI++NNAG+     +     + W   + +N+   F   +AA 
Sbjct: 78  AAYADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAI 137

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
            +M     G I+N+AS  GL    G A Y   KA +  LT+ +  ++A + I +NA+ P 
Sbjct: 138 PLMAAAGGGAIVNVASCWGLRPGPGHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPN 197

Query: 208 FIASDMTAKL-------GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQV 260
            + + M            +    ++   +PLGR  +PE++A +V FLA + AA Y+ G +
Sbjct: 198 EVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADVVLFLA-SDAARYLCGSL 256

Query: 261 LTIDGGMVM 269
           + ++GG  +
Sbjct: 257 VEVNGGKAV 265

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score =  313 bits (804), Expect = e-108
 Identities = 81/259 (31%), Positives = 132/259 (50%), Gaps = 23/259 (8%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFG--GDV 85
            A+VTG++ GIG+A+ATSL   G  VL+N  R  +   E  KEI A    A+      D+
Sbjct: 12  TALVTGSTAGIGKAIATSLVAEGANVLING-RREENVNETIKEIRAQYPDAILQPVVADL 70

Query: 86  SKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQA 145
             E   + +I    + +  VDILINN GI        +    W  + ++N+      T++
Sbjct: 71  GTEQGCQDVI----EKYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRS 126

Query: 146 AAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIA 205
             K M+++K+GR+I IAS   ++ +   A+YSA K   + L++++A+     N+ VN I 
Sbjct: 127 YLKKMIERKEGRVIFIASEAAIMPSQEMAHYSATKTMQLSLSRSLAELTTGTNVTVNTIM 186

Query: 206 PGFIASDMTAKL-----------GEDLEKKILEK----IPLGRYGQPEEVAGLVEFLALN 250
           PG   ++    +            E+ EK+ +++      + R  +PEE+A LV FL+ +
Sbjct: 187 PGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPEEIAHLVTFLS-S 245

Query: 251 PAAGYITGQVLTIDGGMVM 269
           P +  I G  L IDGG+V 
Sbjct: 246 PLSSAINGSALRIDGGLVR 264

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score =  312 bits (802), Expect = e-108
 Identities = 66/243 (27%), Positives = 112/243 (46%), Gaps = 18/243 (7%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
             +V  ASRGIGRAVA  L + G +V +  AR+ +  +                      
Sbjct: 21  GVLVLAASRGIGRAVADVLSQEGAEVTIC-ARNEELLKRSGHRYVV-------------- 65

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
             D+   +    +    VDIL+ NAG  +      +    +++ ID     +    +   
Sbjct: 66  -CDLRKDLDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYL 124

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
             M +K  GRI+ I S   +         ++A+  + G  KT++ E A   I VN +APG
Sbjct: 125 PAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPG 184

Query: 208 FIASDMTAKL-GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGG 266
           +  ++   +L  E+ +K++  +IP+ R  +PEE+A +V FL  +  A Y+TGQ + +DGG
Sbjct: 185 WTETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFLC-SEKASYLTGQTIVVDGG 243

Query: 267 MVM 269
           +  
Sbjct: 244 LSK 246

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score =  312 bits (802), Expect = e-108
 Identities = 79/259 (30%), Positives = 128/259 (49%), Gaps = 19/259 (7%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQ---ALTFGGD 84
           VA++TG+S GIGRA A    + G KV +   R ++  EE  ++I A+G       +   D
Sbjct: 8   VAIITGSSNGIGRATAVLFAREGAKVTITG-RHAERLEETRQQILAAGVSEQNVNSVVAD 66

Query: 85  VSKEADVESMIKTAVDAWGTVDILINNAGI----TRDTLLMRMKKSQWQDVIDLNLTGVF 140
           V+ +A  + ++ T +  +G +DIL+NNAG     ++           +   ++LNL  V 
Sbjct: 67  VTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVI 126

Query: 141 LCTQAAAKIMMKKKKGRIINIASVV-GLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNI 199
             T+ A    +   KG I+NI+S+  GL        YS AKA +   T+  A +     I
Sbjct: 127 ALTKKAVP-HLSSTKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQHGI 185

Query: 200 NVNAIAPGFIASDMTAKLGEDLE---------KKILEKIPLGRYGQPEEVAGLVEFLALN 250
            VN+I+PG +A+   + +G   E           + E +P G  GQP+++A ++ FLA  
Sbjct: 186 RVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAFLADR 245

Query: 251 PAAGYITGQVLTIDGGMVM 269
             + YI G  L +DGG  +
Sbjct: 246 KTSSYIIGHQLVVDGGSSL 264

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score =  309 bits (794), Expect = e-107
 Identities = 64/240 (26%), Positives = 114/240 (47%), Gaps = 16/240 (6%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCK------VLVNYARSSKEAEEVCKEIEASGGQALTF 81
           + ++TGA +GIGRA+A    +A         VLV  +R++ + E++  E  A G    T 
Sbjct: 4   ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTI 63

Query: 82  GGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFL 141
             D+S  ADV  +    V+ +G +D L+NNAG+ R   L  + +  +   ++ NL G F 
Sbjct: 64  TADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFF 123

Query: 142 CTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINV 201
            TQA   +M ++  G I  I SV         + Y  +K G  GL +T+       N+ +
Sbjct: 124 LTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCNVRI 183

Query: 202 NAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL 261
             + PG + + M  K+ ++++  ++          PE++A  V    L P+   +  +++
Sbjct: 184 TDVQPGAVYTPMWGKVDDEMQALMM---------MPEDIAAPVVQAYLQPSR-TVVEEII 233

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score =  305 bits (785), Expect = e-105
 Identities = 80/241 (33%), Positives = 127/241 (52%), Gaps = 6/241 (2%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
             ++TG +RG+G   A     AG +V++      +E     +E+   G  A     DV+ 
Sbjct: 7   TVIITGGARGLGAEAARQAVAAGARVVLAD-VLDEEGAATAREL---GDAARYQHLDVTI 62

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
           E D + ++  A + +G+VD L+NNAGI+    L      +++ V+++NLTGVF+  +   
Sbjct: 63  EEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVI 122

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
             M     G I+NI+S  GL+G    ++Y A+K GV GL+K  A E  +  I VN++ PG
Sbjct: 123 PAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPG 182

Query: 208 FIASDMTAKLGEDLEKKILEKIPLGRYG-QPEEVAGLVEFLALNPAAGYITGQVLTIDGG 266
              + MTA+ G    +      P+GR G +P E+AG V  L  +  + Y+TG  L +DGG
Sbjct: 183 MTYTPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLL-SDTSSYVTGAELAVDGG 241

Query: 267 M 267
            
Sbjct: 242 W 242

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score =  306 bits (786), Expect = e-105
 Identities = 76/253 (30%), Positives = 122/253 (48%), Gaps = 25/253 (9%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           V +VTGAS GIGRA+A      G KV+                 +    +      DV+ 
Sbjct: 10  VVIVTGASMGIGRAIAERFVDEGSKVIDLSIH------------DPGEAKYDHIECDVTN 57

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
              V++ I      +G++ +L+NNAGI     +  M   +W+ +ID+NL G +  ++ A 
Sbjct: 58  PDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAI 117

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
             M++ +   I+NI+SV   +     + Y  +K  VIGLTK++A +YA   +  NA+ P 
Sbjct: 118 PYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYA-PLLRCNAVCPA 176

Query: 208 FIASDMTAKL-----------GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYI 256
            I + +  K             E    +   + P+ R G+P+EVA  V FLA +  A +I
Sbjct: 177 TIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFLA-SREASFI 235

Query: 257 TGQVLTIDGGMVM 269
           TG  L +DGG+ +
Sbjct: 236 TGTCLYVDGGLSI 248

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score =  305 bits (784), Expect = e-105
 Identities = 85/249 (34%), Positives = 120/249 (48%), Gaps = 12/249 (4%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA+VTGA  GIG AVA  L   GC VL         A+    +I   G  A     DVS 
Sbjct: 31  VAIVTGAGAGIGLAVARRLADEGCHVLCAD-IDGDAADAAATKI---GCGAAACRVDVSD 86

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
           E  + +M+   V A+G VD L+ NAG+     L+      +  VI +NL G +LCT+ AA
Sbjct: 87  EQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAA 146

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
             M+++  G I+N++S+ G V   G   Y  +KAG+I L++  A E  S  I  N + P 
Sbjct: 147 PRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPA 206

Query: 208 FIASDMTAKLGEDLE-------KKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQV 260
           F+ + M        +        + +     GR   PEE+AG+V FL  +  A  ITG  
Sbjct: 207 FVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVFLL-SDDASMITGTT 265

Query: 261 LTIDGGMVM 269
              DGG + 
Sbjct: 266 QIADGGTIA 274

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score =  304 bits (781), Expect = e-105
 Identities = 80/255 (31%), Positives = 127/255 (49%), Gaps = 16/255 (6%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEA--SGGQALTFGGDV 85
           +AVVT  S G+G A A  L + G ++L+  +R+ ++ E     I +  SG Q     GD+
Sbjct: 9   LAVVTAGSSGLGFASALELARNGARLLLF-SRNREKLEAAASRIASLVSGAQVDIVAGDI 67

Query: 86  SKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQA 145
            +  D++ + + A D  G  DIL+ + G  R    M +    W +   L         + 
Sbjct: 68  REPGDIDRLFEKARD-LGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRR 126

Query: 146 AAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIA 205
           AA+ M++K  GR++ I SV  L      A  +  +  VIG+ +T+A E A   + VNA+ 
Sbjct: 127 AAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTLALELAPHGVTVNAVL 186

Query: 206 PGFIASDMTAKLG-----------EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAG 254
           P  I +D    L            E+  K +  +IP+GR G+PEE+A +V FLA +  A 
Sbjct: 187 PSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELASVVAFLA-SEKAS 245

Query: 255 YITGQVLTIDGGMVM 269
           +ITG V+ +DGG  +
Sbjct: 246 FITGAVIPVDGGAHI 260

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score =  303 bits (779), Expect = e-105
 Identities = 55/253 (21%), Positives = 110/253 (43%), Gaps = 17/253 (6%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNY-ARSSKEAEEVCKEIEASGGQALTFGGDVS 86
           V +VTG SRGIG+++   L       +V   ARS    +++ ++    G +     GD++
Sbjct: 4   VILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY---GDRFFYVVGDIT 60

Query: 87  KEADVESMIKTAVDAWGTVDILINNAGITRDT-LLMRMKKSQWQDVIDLNLTGVFLCTQA 145
           +++ ++ ++  AV   G +D L+ NAG+      +  +  + W+ + D+N   +      
Sbjct: 61  EDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGI 120

Query: 146 AAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIA 205
           A    +KK  G ++ ++S    +       Y ++KA +     T+A E   R +   A+A
Sbjct: 121 ALP-ELKKTNGNVVFVSSDACNMYFSSWGAYGSSKAALNHFAMTLANE--ERQVKAIAVA 177

Query: 206 PGFIASDMTAKLGEDLEKKILEKIPL---------GRYGQPEEVAGLVEFLALNPAAGYI 256
           PG + +DM   + E++    +    L          +       A +   LAL+     +
Sbjct: 178 PGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSSVPATVYAKLALHGIPDGV 237

Query: 257 TGQVLTIDGGMVM 269
            GQ L+ +   + 
Sbjct: 238 NGQYLSYNDPALA 250

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score =  304 bits (780), Expect = e-104
 Identities = 85/251 (33%), Positives = 127/251 (50%), Gaps = 13/251 (5%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASG--GQALTFGGDV 85
           V ++TG   G+GRA A  L   G K+ +    SS+  E     +  +    + LT   DV
Sbjct: 15  VVLITGGGSGLGRATAVRLAAEGAKLSLVD-VSSEGLEASKAAVLETAPDAEVLTTVADV 73

Query: 86  SKEADVESMIKTAVDAWGTVDILINNAGIT-RDTLLMRMKKSQWQDVIDLNLTGVFLCTQ 144
           S EA VE+ +    + +G +D   NNAGI  +         +++  V+ +NL GVFL  +
Sbjct: 74  SDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLE 133

Query: 145 AAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAI 204
              KIM ++  G ++N ASV G+ G   Q+ Y+AAK GV+GLT+  A EY    I +NAI
Sbjct: 134 KVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAI 193

Query: 205 APGFIASDMTAKL--------GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYI 256
           APG I + M                 ++ ++  P  RYG+  E+A +V FL  +  A Y+
Sbjct: 194 APGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLL-SDDASYV 252

Query: 257 TGQVLTIDGGM 267
              V+ IDGG 
Sbjct: 253 NATVVPIDGGQ 263

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score =  303 bits (779), Expect = e-104
 Identities = 76/252 (30%), Positives = 114/252 (45%), Gaps = 8/252 (3%)

Query: 14  EQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEA 73
           E    ++       +A+VTGA  G+GRAVA +L  AG  V +   R     +E   EI  
Sbjct: 16  ENLYFQSMSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALA-GRRLDALQETAAEI-- 72

Query: 74  SGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMR-MKKSQWQDVI 132
            G  AL    DV+    V ++    V+ +G VD+L NNAG     + M  +  +QW+ V+
Sbjct: 73  -GDDALCVPTDVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVV 131

Query: 133 DLNLTGVFLCTQAAAKIMMKKKK--GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTV 190
           D NLTG FLCTQ A ++M  ++   GRIIN  S+         A Y+A K  + GLTK+ 
Sbjct: 132 DTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAITGLTKST 191

Query: 191 AKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALN 250
           + +    +I    I  G   + M  K+      +    I +        VA  V ++A  
Sbjct: 192 SLDGRVHDIACGQIDIGNADTPMAQKMKAG-VPQADLSIKVEPVMDVAHVASAVVYMASL 250

Query: 251 PAAGYITGQVLT 262
           P    +    + 
Sbjct: 251 PLDANVQFMTIM 262

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score =  301 bits (772), Expect = e-103
 Identities = 71/264 (26%), Positives = 123/264 (46%), Gaps = 23/264 (8%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVN------------YARSSKEAEEVCKEIEASG 75
           VA +TGA+RG GR+ A  L   G  ++                 S ++ +E  + +E  G
Sbjct: 17  VAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQG 76

Query: 76  GQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLN 135
            +ALT   DV  +A +  ++   ++ +G +D+++ NAG+     +  +   QW  VI +N
Sbjct: 77  RKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVN 136

Query: 136 LTGVFLCTQAAAKIMMKKKK-GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEY 194
           LTG +   +A    M++    G I+ ++S  GL    G  +YSA+K G+  LT T+A E 
Sbjct: 137 LTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASKHGLTALTNTLAIEL 196

Query: 195 ASRNINVNAIAPGFIASDMT---------AKLGEDLEKKILEKIPLGRYGQPEEVAGLVE 245
               I VN+I P  + + M          A+    +       +    +   +EVA +V 
Sbjct: 197 GEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQPNGFMTADEVADVVA 256

Query: 246 FLALNPAAGYITGQVLTIDGGMVM 269
           +LA    +G +TG  + +D G + 
Sbjct: 257 WLA-GDGSGTLTGTQIPVDKGALK 279

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score =  299 bits (767), Expect = e-103
 Identities = 63/243 (25%), Positives = 110/243 (45%), Gaps = 13/243 (5%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
             +VTGA +GIGR    +L   G +V+   +R+  + + + +E             D+  
Sbjct: 9   RVLVTGAGKGIGRGTVQALHATGARVVAV-SRTQADLDSLVRE----CPGIEPVCVDLGD 63

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
               E     A+ + G VD+L+NNA +      + + K  +    ++NL  V   +Q  A
Sbjct: 64  WEATER----ALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVA 119

Query: 148 KIMMKKKK-GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
           + ++ +   G I+N++S          + Y + K  +  LTK +A E     I VNA+ P
Sbjct: 120 RGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNP 179

Query: 207 GFIASDMTAKLGEDLEKK--ILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTID 264
             + + M      D  K   +L +IPLG++ + E V   + FL  +  +G  TG  L ++
Sbjct: 180 TVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLL-SDRSGMTTGSTLPVE 238

Query: 265 GGM 267
           GG 
Sbjct: 239 GGF 241

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score =  297 bits (764), Expect = e-102
 Identities = 73/244 (29%), Positives = 117/244 (47%), Gaps = 8/244 (3%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA++TGA  GIG   +  L +AG +V++          ++     + G  A+    D++ 
Sbjct: 13  VAIITGACGGIGLETSRVLARAGARVVLADLP----ETDLAGAAASVGRGAVHHVVDLTN 68

Query: 88  EADVESMIKTAVDAWGTVDILINNAGIT--RDTLLMRMKKSQWQDVIDLNLTGVFLCTQA 145
           E  V ++I   +D +G +DI+ NNA  +   D L+ +M    W D   +N  G  L  + 
Sbjct: 69  EVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKY 128

Query: 146 AAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIA 205
           A   ++    G I+NI+S            Y+  KA +  LT+ VA +Y    +  NAIA
Sbjct: 129 AIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQYGRHGVRCNAIA 188

Query: 206 PGFIASDMTAK-LGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTID 264
           PG + +      L + +          GR G+P E+A LV FLA +  A +ITGQV+  D
Sbjct: 189 PGLVRTPRLEVGLPQPIVDIFATHHLAGRIGEPHEIAELVCFLA-SDRAAFITGQVIAAD 247

Query: 265 GGMV 268
            G++
Sbjct: 248 SGLL 251

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score =  297 bits (763), Expect = e-102
 Identities = 64/257 (24%), Positives = 114/257 (44%), Gaps = 27/257 (10%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEI--EASGGQALTFGGDV 85
           VA+VTGA++GIGRA A +L   G KV +    + +   +    +  +    + L    DV
Sbjct: 9   VALVTGAAQGIGRAFAEALLLKGAKVALVD-WNLEAGVQCKAALHEQFEPQKTLFIQCDV 67

Query: 86  SKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQA 145
           + +  +    +  VD +G +DIL+NNAG+  +          W+  + +NL  V   T  
Sbjct: 68  ADQQQLRDTFRKVVDHFGRLDILVNNAGVNNE--------KNWEKTLQINLVSVISGTYL 119

Query: 146 AAKIMMKKKKGR---IINIASVVGLVGNIGQANYSAAKAGVIGLTKTVA--KEYASRNIN 200
               M K+  G    IIN++S+ GL+    Q  Y A+K G++G T++ A      +  + 
Sbjct: 120 GLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNSGVR 179

Query: 201 VNAIAPGFIASDMTAKLGED--------LEKKILEKIPLGRYGQPEEVAGLVEFLALNPA 252
           +NAI PGF+ + +   + ++         +  I + I       P  +A  +  L     
Sbjct: 180 LNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLI---E 236

Query: 253 AGYITGQVLTIDGGMVM 269
              + G ++ I     +
Sbjct: 237 DDALNGAIMKITTSKGI 253

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score =  297 bits (763), Expect = e-102
 Identities = 83/246 (33%), Positives = 121/246 (49%), Gaps = 8/246 (3%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           +A+VTGAS GIGRA A    + G KV+V   R+     E+  EI   GG+A    GDV  
Sbjct: 10  IAIVTGASSGIGRAAALLFAREGAKVVVTA-RNGNALAELTDEIAGGGGEAAALAGDVGD 68

Query: 88  EADVESMIKTAVDAWGTVDILINNAGIT-RDTLLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
           EA  E++++ AV  +G +D   NNAG       +  +    W++ +D NLT  FL  +  
Sbjct: 69  EALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQ 128

Query: 147 AKIMMKKKKGRIINIASVVG-LVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIA 205
              +     G +   +S VG   G  G A Y+A+KAG+IGL + +A E  +R I VNA+ 
Sbjct: 129 VPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELGARGIRVNALL 188

Query: 206 PGFIASDMTAKL----GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL 261
           PG   +            +    +     L R  +PEE+A    +LA +  A ++TG  L
Sbjct: 189 PGGTDTPANFANLPGAAPETRGFVEGLHALKRIARPEEIAEAALYLA-SDGASFVTGAAL 247

Query: 262 TIDGGM 267
             DGG 
Sbjct: 248 LADGGA 253

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score =  296 bits (760), Expect = e-102
 Identities = 69/250 (27%), Positives = 114/250 (45%), Gaps = 19/250 (7%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           V VVTGASRGIGR +A  L KAG  V +   R       V +E ++ GGQ +    D S+
Sbjct: 7   VCVVTGASRGIGRGIALQLCKAGATVYITG-RHLDTLRVVAQEAQSLGGQCVPVVCDSSQ 65

Query: 88  EADVESMIKTA-VDAWGTVDILINNAGI-------TRDTLLMRMKKSQWQDVIDLNLTGV 139
           E++V S+ +    +  G +D+L+NNA         TR+        S W D+ ++ L G 
Sbjct: 66  ESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGH 125

Query: 140 FLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNI 199
           + C+   A++M+   +G I+ I+S   L   +    Y   KA    L    A E     +
Sbjct: 126 YFCSVYGARLMVPAGQGLIVVISSPGSL-QYMFNVPYGVGKAACDKLAADCAHELRRHGV 184

Query: 200 NVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQ-------PEEVAGLVEFLALNPA 252
           +  ++ PG + +++  +     E  +L+   L ++          E     V  LA +P 
Sbjct: 185 SCVSLWPGIVQTELLKEHMAKEE--VLQDPVLKQFKSAFSSAETTELSGKCVVALATDPN 242

Query: 253 AGYITGQVLT 262
              ++G+VL 
Sbjct: 243 ILSLSGKVLP 252

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score =  295 bits (759), Expect = e-102
 Identities = 61/251 (24%), Positives = 112/251 (44%), Gaps = 26/251 (10%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
             +VTG S+GIG+AV   L +     ++N       + E  K I+A          D++K
Sbjct: 6   NYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAENLKFIKA----------DLTK 55

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
           + D+ +++        + D +  NAGI     +  +     + V+DLN+       +   
Sbjct: 56  QQDITNVLDIIK--NVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLE 113

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
             +  K    I+   S    +       Y+ +K  +  +TK++A + A   I VN + PG
Sbjct: 114 NNL--KVGASIVFNGSDQCFIAKPNSFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPG 171

Query: 208 FIASDMTAKL-----------GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYI 256
            + +D+   L            ++ +K+  ++ PL R  QP+E+A LV FL  +  + ++
Sbjct: 172 TVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIFLL-SDKSKFM 230

Query: 257 TGQVLTIDGGM 267
           TG ++ IDGG 
Sbjct: 231 TGGLIPIDGGY 241

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score =  296 bits (761), Expect = e-101
 Identities = 81/248 (32%), Positives = 121/248 (48%), Gaps = 11/248 (4%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           V +VTG   GIGRA A    K G  V+V    +   A  V  EI   G +A     DVS 
Sbjct: 29  VCIVTGGGSGIGRATAELFAKNGAYVVVAD-VNEDAAVRVANEI---GSKAFGVRVDVSS 84

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
             D ESM++     WG VD+L+NNAG      ++ + +  W  ++ +N+ G+FLC++   
Sbjct: 85  AKDAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVI 144

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
            +M +   G IIN  S         +  Y A+K  +  LT+ +A ++A   I VNA+APG
Sbjct: 145 PVMRRNGGGSIINTTSYTATSAIADRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPG 204

Query: 208 FIASDMTAKL------GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL 261
            I S    K+         L      +  + R G  EE+A  + FLA +  + + TG +L
Sbjct: 205 TIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAEAMLFLA-SDRSRFATGSIL 263

Query: 262 TIDGGMVM 269
           T+DGG  +
Sbjct: 264 TVDGGSSI 271

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score =  295 bits (757), Expect = e-101
 Identities = 68/243 (27%), Positives = 115/243 (47%), Gaps = 13/243 (5%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
            A+VTGA +GIGR    +L  +G KV+    R++ +   + KE             D+  
Sbjct: 9   RALVTGAGKGIGRDTVKALHASGAKVVAV-TRTNSDLVSLAKEC----PGIEPVCVDLGD 63

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
               E     A+   G VD+L+NNA +      + + K  +     +NL  VF  +Q  A
Sbjct: 64  WDATEK----ALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVA 119

Query: 148 KIMMKKKK-GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
           + M+ +   G I+N++S+V  V       YS+ K  +  LTK +A E     I VN++ P
Sbjct: 120 RDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNP 179

Query: 207 GFIASDMTAKLGEDLE--KKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTID 264
             + +DM  K+  D E  +K+ E+ PL ++ + E+V   + FL  +  +   +G  + +D
Sbjct: 180 TVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLL-SDRSASTSGGGILVD 238

Query: 265 GGM 267
            G 
Sbjct: 239 AGY 241

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score =  295 bits (757), Expect = e-101
 Identities = 64/246 (26%), Positives = 112/246 (45%), Gaps = 14/246 (5%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
            A+V G + G+G A    L + G +VL+   R+      + +E    G +      D++ 
Sbjct: 10  KAIVIGGTHGMGLATVRRLVEGGAEVLLTG-RNESNIARIREEF---GPRVHALRSDIAD 65

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
             ++  +   A    G +D+L  NAG++      ++ ++ +     +N  G F   Q   
Sbjct: 66  LNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLT 125

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
            ++  ++ G I+  +SV    G+ G + YSA+KA ++     +A E   R I VN+++PG
Sbjct: 126 PLI--REGGSIVFTSSVADEGGHPGMSVYSASKAALVSFASVLAAELLPRGIRVNSVSPG 183

Query: 208 FIASDMTAKLG------EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL 261
           FI +      G       + +       P+ R G  +EVA  V FLA    A + TG  L
Sbjct: 184 FIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTADEVARAVLFLAFE--ATFTTGAKL 241

Query: 262 TIDGGM 267
            +DGG+
Sbjct: 242 AVDGGL 247

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score =  297 bits (762), Expect = e-101
 Identities = 91/257 (35%), Positives = 134/257 (52%), Gaps = 20/257 (7%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNY---------ARSSKEAEEVCKEIEASGGQA 78
           V +VTGA  GIGRA A +    G +V+VN          A     A+ V  EI A+GG+A
Sbjct: 29  VVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEA 88

Query: 79  LTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTG 138
           +  G +V+       +I+TAV+ +G +D+L+NNAGI RD ++    + ++  VI ++L G
Sbjct: 89  VADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKG 148

Query: 139 VFLCTQAAAKIM------MKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAK 192
            F   + AA          K   GRIIN +S  GL G++GQ NYSAAKAG+  LT   A 
Sbjct: 149 HFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQGNYSAAKAGIATLTLVGAA 208

Query: 193 EYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPA 252
           E     + VNAIAP    + MT  +     + +  +        PE V+ LV +L  +  
Sbjct: 209 EMGRYGVTVNAIAPS-ARTRMTETV---FAEMMATQDQDFDAMAPENVSPLVVWLG-SAE 263

Query: 253 AGYITGQVLTIDGGMVM 269
           A  +TG+V  ++GG + 
Sbjct: 264 ARDVTGKVFEVEGGKIR 280

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score =  295 bits (758), Expect = e-101
 Identities = 64/263 (24%), Positives = 114/263 (43%), Gaps = 24/263 (9%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNY------------ARSSKEAEEVCKEIEASG 75
           VA +TGA+RG GRA A  +   G  ++                 S  +  E  + +EA+ 
Sbjct: 13  VAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAAN 72

Query: 76  GQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLN 135
            + +    D      +  ++   V A G +DI++ NAG+        +    ++DV+D+N
Sbjct: 73  RRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDIN 132

Query: 136 LTGVFLCTQAAAKIMMKKKK-GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEY 194
           +TG +    A A  +++  + G II I+S  G+       +Y+A+K  V GL +  A E 
Sbjct: 133 VTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYTASKHAVTGLARAFAAEL 192

Query: 195 ASRNINVNAIAPGFIASDMT----------AKLGEDLEKKILEKIPLGRYGQPEEVAGLV 244
              +I VN++ PG + + M           A         +L         +PE++A  V
Sbjct: 193 GKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLPDWVAEPEDIADTV 252

Query: 245 EFLALNPAAGYITGQVLTIDGGM 267
            +LA +  +  +T   + +D G 
Sbjct: 253 CWLA-SDESRKVTAAQIPVDQGS 274

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score =  295 bits (757), Expect = e-101
 Identities = 70/257 (27%), Positives = 111/257 (43%), Gaps = 21/257 (8%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA++TG + G+GRA+       G +V V        AE + +   A GG A+   GDV  
Sbjct: 7   VALITGGASGLGRALVDRFVAEGARVAVLDKS----AERLRELEVAHGGNAVGVVGDVRS 62

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMK-----KSQWQDVIDLNLTGVFLC 142
             D +   +  + A+G +D LI NAGI   +  +         + + D+  +N+ G    
Sbjct: 63  LQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHA 122

Query: 143 TQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
            +A     +   +G ++   S  G   N G   Y+A K  V+GL + +A E A   + VN
Sbjct: 123 VKACLP-ALVSSRGSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQMAFELAPH-VRVN 180

Query: 203 AIAPGFIASDMTAKLG----------EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPA 252
            +APG + +D+                 L   +   +P+GR    EE  G   F A    
Sbjct: 181 GVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEYTGAYVFFATRGD 240

Query: 253 AGYITGQVLTIDGGMVM 269
           +   TG +L  DGGM +
Sbjct: 241 SLPATGALLNYDGGMGV 257

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score =  294 bits (756), Expect = e-100
 Identities = 75/271 (27%), Positives = 130/271 (47%), Gaps = 31/271 (11%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLV-----------NYARSSKEAEEVCKEIEASGG 76
           VA +TGA+RG GR+ A +L + G  ++                +  +  E  +++EA G 
Sbjct: 30  VAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGR 89

Query: 77  QALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRD-TLLMRMKKSQWQDVIDLN 135
           + +    DV     +++ +   V   G +DI++ NA +  + T L RM    W+D+ID+N
Sbjct: 90  RIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVN 149

Query: 136 LTGVFLCTQAAAKIMMKKKK-GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEY 194
           L G ++  + A   +M  K+ G I+  +S+ GL G     NY A+K G+ GL +T+A E 
Sbjct: 150 LNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGLHGLMRTMALEL 209

Query: 195 ASRNINVNAIAPGFIASDMTAKLGE----------------DLEKKILEKIPLGRYGQPE 238
             RNI VN + P  +A+ M                       +  + +  +P+    +P 
Sbjct: 210 GPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHVLPIPY-VEPA 268

Query: 239 EVAGLVEFLALNPAAGYITGQVLTIDGGMVM 269
           +++  + FL  +  A YITG  L +DGG ++
Sbjct: 269 DISNAILFLV-SDDARYITGVSLPVDGGALL 298

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score =  292 bits (749), Expect = e-100
 Identities = 86/241 (35%), Positives = 133/241 (55%), Gaps = 10/241 (4%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA+V+G +RG+G +   ++   G KV+       +E + +  E+      A     DV++
Sbjct: 9   VALVSGGARGMGASHVRAMVAEGAKVVFGD-ILDEEGKAMAAEL---ADAARYVHLDVTQ 64

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
            A  ++ + TAV A+G + +L+NNAGI     +     ++WQ ++D+NLTGVFL  +A  
Sbjct: 65  PAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVV 124

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
           K M +  +G IINI+S+ GL G +    Y+A K  V GLTK+ A E     I VN+I PG
Sbjct: 125 KPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPG 184

Query: 208 FIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM 267
            + + MT  + ED     + +  LGR  +P EV+ LV +LA +  + Y TG    +DGG 
Sbjct: 185 LVKTPMTDWVPED-----IFQTALGRAAEPVEVSNLVVYLA-SDESSYSTGAEFVVDGGT 238

Query: 268 V 268
           V
Sbjct: 239 V 239

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score =  289 bits (742), Expect = 4e-99
 Identities = 60/248 (24%), Positives = 88/248 (35%), Gaps = 18/248 (7%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVS- 86
             +   A  GIG   +  L K   K  V   R          +             DV+ 
Sbjct: 7   NVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTV 66

Query: 87  KEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
             A+ + ++K   D   TVDILIN AGI  D         Q +  I +N TG+   T A 
Sbjct: 67  PVAESKKLLKKIFDQLKTVDILINGAGILDD--------HQIERTIAINFTGLVNTTTAI 118

Query: 147 AKIMMKKKKGR---IINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNA 203
                K+K G    I NI SV G         YSA+KA V+  T ++AK      +   +
Sbjct: 119 LDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYS 178

Query: 204 IAPGFIASDMTAKLGE--DLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL 261
           I PG   + +        D+E ++ E +        E+                  G + 
Sbjct: 179 INPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAIEANK----NGAIW 234

Query: 262 TIDGGMVM 269
            +D G + 
Sbjct: 235 KLDLGTLE 242

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score =  289 bits (742), Expect = 5e-99
 Identities = 82/251 (32%), Positives = 126/251 (50%), Gaps = 14/251 (5%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA++TGA  G G  +A    K G KV++   R    AE V  EI   G  AL    D+SK
Sbjct: 11  VALITGAGSGFGEGMAKRFAKGGAKVVIVD-RDKAGAERVAGEI---GDAALAVAADISK 66

Query: 88  EADVESMIKTAVDAWGTVDILINNAGIT-RDTLLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
           EADV++ ++ A+  +G VDIL+NNAGI  +      ++  ++  ++ +N+ GV+L T   
Sbjct: 67  EADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKL 126

Query: 147 AKIMMKKKKGR----IINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
                +         I+N+AS          A Y+A K  V+ +TK +A E A   I V 
Sbjct: 127 IPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAIELAPAKIRVV 186

Query: 203 AIAPGFIASDMTAKL----GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITG 258
           A+ P    + +         E++ KK  + IP+GR  +P+++A    FL  +P A  ITG
Sbjct: 187 ALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEAAAFLC-SPQASMITG 245

Query: 259 QVLTIDGGMVM 269
             L +DGG  +
Sbjct: 246 VALDVDGGRSI 256

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score =  287 bits (737), Expect = 2e-98
 Identities = 72/249 (28%), Positives = 124/249 (49%), Gaps = 18/249 (7%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           V ++T A++GIG+A A +  + G KV+          E   +E+E   G   T   DV+K
Sbjct: 8   VIILTAAAQGIGQAAALAFAREGAKVIATDIN-----ESKLQELEKYPG-IQTRVLDVTK 61

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
           +  ++       +    +D+L N AG      ++  ++  W   ++LN+  ++L  +A  
Sbjct: 62  KKQIDQF----ANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFL 117

Query: 148 KIMMKKKKGRIINIASVVGLV-GNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
             M+ +K G IIN++SV   V G + +  YS  KA VIGLTK+VA ++  + I  N + P
Sbjct: 118 PKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCP 177

Query: 207 GFIASDMTAKL------GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQV 260
           G + +    +        E+     L++   GR+   EE+A L  +LA +  + Y+TG  
Sbjct: 178 GTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLA-SDESAYVTGNP 236

Query: 261 LTIDGGMVM 269
           + IDGG  +
Sbjct: 237 VIIDGGWSL 245

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score =  287 bits (738), Expect = 5e-98
 Identities = 69/244 (28%), Positives = 125/244 (51%), Gaps = 5/244 (2%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
             ++TG   GIGRAV+ +  K G  + + Y     +A E  + +E  G + +   GD+S 
Sbjct: 49  NVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSD 108

Query: 88  EADVESMIKTAVDAWGTVDILINNAGI-TRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
           E   + +++  V   G+++IL+NN         L  +   Q +    +N+   F  T+AA
Sbjct: 109 EQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAA 168

Query: 147 AKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
              +  K+   IIN AS+V   GN    +YSA K  ++  T+++++    + I VN +AP
Sbjct: 169 LSHL--KQGDVIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAP 226

Query: 207 GFIASDMT-AKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDG 265
           G I + +  +   E    +    +P+ R GQP E+A    +LA +  + Y+TGQ++ ++G
Sbjct: 227 GPIWTPLIPSSFDEKKVSQFGSNVPMQRPGQPYELAPAYVYLA-SSDSSYVTGQMIHVNG 285

Query: 266 GMVM 269
           G+++
Sbjct: 286 GVIV 289

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score =  285 bits (733), Expect = 9e-98
 Identities = 61/251 (24%), Positives = 113/251 (45%), Gaps = 13/251 (5%)

Query: 22  QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGG---QA 78
              +  +A++TGAS+GIG  +A  L   G +V++  ARS +  E+V  EI  S     + 
Sbjct: 3   LEKQKGLAIITGASQGIGAVIAAGLATDGYRVVL-IARSKQNLEKVHDEIMRSNKHVQEP 61

Query: 79  LTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTG 138
           +    D++     ++ IK     +G VDIL+N A +  D  L       ++ ++++N+  
Sbjct: 62  IVLPLDITDCTKADTEIKDIHQKYGAVDILVNAAAMFMDGSLSEPV-DNFRKIMEINVIA 120

Query: 139 VFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRN 198
            +   +   +IM  +K G I N+AS     G      Y + K  ++GL +++ +E A   
Sbjct: 121 QYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGIYGSTKFALLGLAESLYRELAPLG 180

Query: 199 INVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITG 258
           I V  + PG++ +DM  K G   + +           QP+++   +  L        I  
Sbjct: 181 IRVTTLCPGWVNTDMAKKAGTPFKDE--------EMIQPDDLLNTIRCLLNLSENVCIKD 232

Query: 259 QVLTIDGGMVM 269
            V  +   ++ 
Sbjct: 233 IVFEMKKSIIE 243

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score =  286 bits (733), Expect = 1e-97
 Identities = 60/249 (24%), Positives = 100/249 (40%), Gaps = 19/249 (7%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEA------EEVCKEIEASGGQALTF 81
              +TGASRGIG A+A    + G  V +    +                + A+GGQ L  
Sbjct: 8   TLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLAL 67

Query: 82  GGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFL 141
             D+ +E  V + +   VD +G +DIL+NNA        +     ++  +  +N  G F+
Sbjct: 68  KCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFV 127

Query: 142 CTQAAAKIMMKKKKGRIINIASVVGLVGNI--GQANYSAAKAGVIGLTKTVAKEYASRNI 199
           C QA    +++     I+ +A    L          Y+ AK G+  +T  +A E+  + +
Sbjct: 128 CAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGYTLAKMGMSLVTLGLAAEFGPQGV 187

Query: 200 NVNAIAPG-FIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITG 258
            +NA+ P   IA+D    L           +      +PE +A     +     A    G
Sbjct: 188 AINALWPRTVIATDAINMLPG---------VDAAACRRPEIMADAAHAVL-TREAAGFHG 237

Query: 259 QVLTIDGGM 267
           Q L  D  +
Sbjct: 238 QFLIDDEVL 246

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score =  285 bits (731), Expect = 3e-97
 Identities = 86/252 (34%), Positives = 130/252 (51%), Gaps = 24/252 (9%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA+VTG S GIG AV  +L + G KV+   +   K    V    +           DV+ 
Sbjct: 16  VAIVTGGSSGIGLAVVDALVRYGAKVVSV-SLDEKSDVNVSDHFKI----------DVTN 64

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
           E +V+  ++     +G +DIL+NNAGI + + L       W+ +ID+N+ G +L  +   
Sbjct: 65  EEEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTI 124

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
            +M+    G IINIASV         A Y  +K  ++GLT++VA +YA   I  NA+ PG
Sbjct: 125 PVMLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYA-PKIRCNAVCPG 183

Query: 208 FIASDMTAKL-----------GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYI 256
            I + M  K             E   ++   + P+GR G+PEEVA +V FLA +  + +I
Sbjct: 184 TIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVAFLA-SDRSSFI 242

Query: 257 TGQVLTIDGGMV 268
           TG  LT+DGG++
Sbjct: 243 TGACLTVDGGLL 254

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score =  283 bits (727), Expect = 6e-97
 Identities = 57/244 (23%), Positives = 100/244 (40%), Gaps = 15/244 (6%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQA---LTFGGD 84
           + +VTGAS GIGR  A +  + G  V++   R+ ++  +V   I    G+          
Sbjct: 14  IILVTGASDGIGREAAMTYARYGATVILL-GRNEEKLRQVASHINEETGRQPQWFILDLL 72

Query: 85  VSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMR-MKKSQWQDVIDLNLTGVFLCT 143
                + + + +     +  +D +++NAG+  D   M       WQDV+ +N+   F+ T
Sbjct: 73  TCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLT 132

Query: 144 QAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNA 203
           QA   +++K   G ++  +S VG  G      Y+A+K    G+ + +A EY    + VN 
Sbjct: 133 QALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEYQQ-RLRVNC 191

Query: 204 IAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTI 263
           I PG   + M A                 +   P ++  L  +L     +   TG     
Sbjct: 192 INPGGTRTAMRASA--------FPTEDPQKLKTPADIMPLYLWLMG-DDSRRKTGMTFDA 242

Query: 264 DGGM 267
             G 
Sbjct: 243 QPGR 246

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score =  283 bits (727), Expect = 2e-96
 Identities = 80/268 (29%), Positives = 120/268 (44%), Gaps = 33/268 (12%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNY-----------ARSSKEAEEVCKEIEASGG 76
           VA +TGA+RG GRA A  L   G  ++                + +E     K +E  G 
Sbjct: 15  VAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGS 74

Query: 77  QALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNL 136
           + +    DV     + + ++  +D  G +DI++ NAGI      M      W DVID+NL
Sbjct: 75  RIVARQADVRDRESLSAALQAGLDELGRLDIVVANAGIAP----MSAGDDGWHDVIDVNL 130

Query: 137 TGVFLCTQAAAKIMMKKKK-GRIINIASVVGLVG----NIGQANYSAAKAGVIGLTKTVA 191
           TGV+   + A   ++K+   G I+ I+S  GL G    + G   Y AAK GV+GL +  A
Sbjct: 131 TGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKHGVVGLMRVYA 190

Query: 192 KEYASRNINVNAIAPGFIASDMTAK-----------LGEDLEKKILEKIPLGRYGQPEEV 240
              A + I VN+I P  + + M                 D    +   +P+     PE+V
Sbjct: 191 NLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMPV-EVLAPEDV 249

Query: 241 AGLVEFLALNPAAGYITGQVLTIDGGMV 268
           A  V +L  +  A YITG  L +D G +
Sbjct: 250 ANAVAWLV-SDQARYITGVTLPVDAGFL 276

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score =  281 bits (722), Expect = 8e-96
 Identities = 66/247 (26%), Positives = 112/247 (45%), Gaps = 14/247 (5%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           +AV+TGA+ GIG A A      G +V +   R     +    EI   GG A+    D + 
Sbjct: 31  IAVITGATSGIGLAAAKRFVAEGARVFITG-RRKDVLDAAIAEI---GGGAVGIQADSAN 86

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
            A+++ + +      G +D+L  NAG      L  + + Q+ D  D N+ GV    Q A 
Sbjct: 87  LAELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKAL 146

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
            ++   +   ++   S  G  G    + Y+A+KA +    +    +   R I +N ++PG
Sbjct: 147 PLL--ARGSSVVLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDLKDRGIRINTLSPG 204

Query: 208 FIASDMTAKLG-------EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQV 260
              +    +L        + L   +  ++P+GR G+ EEVA    FLA +  + ++TG  
Sbjct: 205 PTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEEVAAAALFLA-SDDSSFVTGAE 263

Query: 261 LTIDGGM 267
           L +DGG 
Sbjct: 264 LFVDGGS 270

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score =  278 bits (713), Expect = 1e-94
 Identities = 75/244 (30%), Positives = 126/244 (51%), Gaps = 7/244 (2%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA++TG + GIG A+AT   + G KV++   R S   E+  K +  +  Q   F  D S 
Sbjct: 8   VAIITGGTLGIGLAIATKFVEEGAKVMITG-RHSDVGEKAAKSV-GTPDQIQFFQHDSSD 65

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
           E     +      A+G V  L+NNAGI  +  +     ++W+ ++ +NL GVF  T+   
Sbjct: 66  EDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGI 125

Query: 148 KIMMKKKKG-RIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASR--NINVNAI 204
           + M  K  G  IIN++S+ G VG+     Y+A+K  V  ++K+ A + A +  ++ VN +
Sbjct: 126 QRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTV 185

Query: 205 APGFIASDMTAKL-GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTI 263
            PG+I + +   L G +       K P+G  G+P ++A +  +LA +  + + TG    +
Sbjct: 186 HPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLA-SNESKFATGSEFVV 244

Query: 264 DGGM 267
           DGG 
Sbjct: 245 DGGY 248

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score =  277 bits (712), Expect = 2e-94
 Identities = 72/249 (28%), Positives = 121/249 (48%), Gaps = 15/249 (6%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           V VVTG  RGIG  +  +   +G +V++         E   + +E     A+    DV++
Sbjct: 11  VVVVTGGGRGIGAGIVRAFVNSGARVVICDKD-----ESGGRALEQELPGAVFILCDVTQ 65

Query: 88  EADVESMIKTAVDAWGTVDILINNAGIT-RDTLLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
           E DV++++   +  +G +D ++NNAG               ++ +++LNL G +  T+ A
Sbjct: 66  EDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLA 125

Query: 147 AKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
               ++K +G +INI+S+VG +G      Y A K  V  +TK +A + +   + VN I+P
Sbjct: 126 LP-YLRKSQGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISP 184

Query: 207 GFIASDMTAKLG------EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQV 260
           G I + +  +L           ++ +   PLGR GQP EV     FLA    A + TG  
Sbjct: 185 GNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASE--ANFCTGIE 242

Query: 261 LTIDGGMVM 269
           L + GG  +
Sbjct: 243 LLVTGGAEL 251

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score =  274 bits (703), Expect = 2e-93
 Identities = 60/239 (25%), Positives = 104/239 (43%), Gaps = 15/239 (6%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQA---LTFGGD 84
           V +VTGA+RGIG A A +    G  V++   R+     EV  +I+++G      +    +
Sbjct: 16  VILVTGAARGIGAAAARAYAAHGASVVLL-GRTEASLAEVSDQIKSAGQPQPLIIALNLE 74

Query: 85  VSKEADVESMIKTAVDAWGTVDILINNAGITRD-TLLMRMKKSQWQDVIDLNLTGVFLCT 143
            +       +       +G +D L++NA I    T L ++    +  V+ +N+   F+ T
Sbjct: 75  NATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLT 134

Query: 144 QAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEY-ASRNINVN 202
           +A   ++ + +   I   +S VG  G      Y  +K    GL +T+A E      +  N
Sbjct: 135 RALLPLLKRSEDASIAFTSSSVGRKGRANWGAYGVSKFATEGLMQTLADELEGVTAVRAN 194

Query: 203 AIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL 261
           +I PG   + M A+   D       + PL     PE++  +  +L   P +  I GQ L
Sbjct: 195 SINPGATRTGMRAQAYPD-------ENPLNN-PAPEDIMPVYLYLMG-PDSTGINGQAL 244

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score =  275 bits (707), Expect = 3e-93
 Identities = 75/246 (30%), Positives = 129/246 (52%), Gaps = 7/246 (2%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKE-AEEVCKEIEASGGQALTFGGDVS 86
            A+VTG   GIGRA A +  + G  V +NY  + +E A++V   IE  G +A+   GD+S
Sbjct: 51  KALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLS 110

Query: 87  KEADVESMIKTAVDAWGTVDILINNAGI-TRDTLLMRMKKSQWQDVIDLNLTGVFLCTQA 145
            E+   S++  A +A G +DIL   AG  T    +  +   Q+Q    +N+  +F  TQ 
Sbjct: 111 DESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQE 170

Query: 146 AAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIA 205
           A  ++   K   II  +S+     +    +Y+A KA ++  ++ +AK+ A + I VN +A
Sbjct: 171 AIPLL--PKGASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVA 228

Query: 206 PGFIASDM--TAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTI 263
           PG I + +  +    +D   +  ++ P+ R GQP E+A +  +LA +  + Y+T +V  +
Sbjct: 229 PGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLA-SQESSYVTAEVHGV 287

Query: 264 DGGMVM 269
            GG  +
Sbjct: 288 CGGEHL 293

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score =  284 bits (728), Expect = 1e-92
 Identities = 94/249 (37%), Positives = 137/249 (55%), Gaps = 23/249 (9%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVN--------YARSSKEAEEVCKEIEASGGQAL 79
           V ++TGA  G+G+  +    K G KV+VN           +SK A+ V  EI  +GG A+
Sbjct: 10  VVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAV 69

Query: 80  TFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGV 139
               +V    D + +++TAV  +GTV ++INNAGI RD  + +M +  ++ VID++L G 
Sbjct: 70  ADYNNV---LDGDKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGA 126

Query: 140 FLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNI 199
           F  T+AA     K+K GRI+N +S  GL GN GQANY++AK+ ++G  +T+AKE A  NI
Sbjct: 127 FAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQANYASAKSALLGFAETLAKEGAKYNI 186

Query: 200 NVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQ 259
             NAIAP    S MT  +            P+     PE+VA LV +L+   A   +TGQ
Sbjct: 187 KANAIAP-LARSRMTESIMPP---------PMLEKLGPEKVAPLVLYLS--SAENELTGQ 234

Query: 260 VLTIDGGMV 268
              +  G  
Sbjct: 235 FFEVAAGFY 243

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score =  262 bits (671), Expect = 4e-84
 Identities = 94/263 (35%), Positives = 147/263 (55%), Gaps = 17/263 (6%)

Query: 7   RAQVATIEQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEE 66
            A+      A+     +++  V ++TGA  G+G+  A    K G KV+VN  +    A +
Sbjct: 303 EARKLPANDASGAPTVSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD---ATK 359

Query: 67  VCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKS 126
              EI+A+GG+A     DV+K++  E++IK  +D +GT+DIL+NNAGI RD    +M K 
Sbjct: 360 TVDEIKAAGGEAWPDQHDVAKDS--EAIIKNVIDKYGTIDILVNNAGILRDRSFAKMSKQ 417

Query: 127 QWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGL 186
           +W  V  ++L G F  ++ A    ++K+ GRIINI S  G+ GN GQANYS++KAG++GL
Sbjct: 418 EWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGILGL 477

Query: 187 TKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEF 246
           +KT+A E A  NI VN +AP    + MT  +  + +K +            ++VA L+ +
Sbjct: 478 SKTMAIEGAKNNIKVNIVAP-HAETAMTLSIMREQDKNLY---------HADQVAPLLVY 527

Query: 247 LALNPAAGYITGQVLTIDGGMVM 269
           L        +TG+   I GG + 
Sbjct: 528 LG--TDDVPVTGETFEIGGGWIG 548

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score =  270 bits (693), Expect = 3e-91
 Identities = 70/279 (25%), Positives = 113/279 (40%), Gaps = 42/279 (15%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNY-----------ARSSKEAEEVCKEIEASGG 76
           V +VTG +RG GR+ A  L + G  +++               +S++ EE   E+E +G 
Sbjct: 12  VVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGR 71

Query: 77  QALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNL 136
           +A T   DV   A V   +  AV  +G +D+++ NAGI        +    + D  D++ 
Sbjct: 72  KAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGICPLG--AHLPVQAFADAFDVDF 129

Query: 137 TGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNI-----------GQANYSAAKAGVIG 185
            GV     AA   +       II   SV GL+              G A YS AK  V  
Sbjct: 130 VGVINTVHAALPYLTSG--ASIITTGSVAGLIAAAQPPGAGGPQGPGGAGYSYAKQLVDS 187

Query: 186 LTKTVAKEYASRNINVNAIAPGFIASDMTAKLG-----------EDLEKKILEKIPLGR- 233
            T  +A + A ++I  N I P  + +DM                      +L    +   
Sbjct: 188 YTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAFPAMQAM 247

Query: 234 ---YGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 269
              Y +  +++  V FLA +  + Y+TG    +D G ++
Sbjct: 248 PTPYVEASDISNAVCFLA-SDESRYVTGLQFKVDAGAML 285

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score =  268 bits (688), Expect = 4e-90
 Identities = 89/250 (35%), Positives = 128/250 (51%), Gaps = 23/250 (9%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNY--------ARSSKEAEEVCKEIEASGGQAL 79
           V +VTGA  G+GRA A +  + G  V+VN          + S  A++V +EI   GG+A+
Sbjct: 11  VVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAV 70

Query: 80  TFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGV 139
                V      E ++KTA+D +G +D+++NNAGI RD    R+    W  +  ++L G 
Sbjct: 71  ANYDSV---EAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGS 127

Query: 140 FLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNI 199
           F  T+AA   M K+  GRII  AS  G+ GN GQANYSAAK G++GL  T+  E    NI
Sbjct: 128 FQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVIEGRKNNI 187

Query: 200 NVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQ 259
           + N IAP    S MT  +  +   + L         +PE VA LV +L     +    G 
Sbjct: 188 HCNTIAPNA-GSRMTETVMPEDLVEAL---------KPEYVAPLVLWLC--HESCEENGG 235

Query: 260 VLTIDGGMVM 269
           +  +  G + 
Sbjct: 236 LFEVGAGWIG 245

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score =  265 bits (680), Expect = 3e-89
 Identities = 72/275 (26%), Positives = 120/275 (43%), Gaps = 35/275 (12%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVN---------------YARSSKEAEEVCKEIE 72
           VA VTGA+RG GR+ A  L + G  ++                  A + ++  E    ++
Sbjct: 13  VAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVK 72

Query: 73  ASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRD-TLLMRMKKSQWQDV 131
               + +T   DV     +++ + + V+  G +DI++ NAGI      L +  +  W ++
Sbjct: 73  GHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEM 132

Query: 132 IDLNLTGVFLCTQAAAKIMMKKKK-GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTV 190
           ID+NL GV+   +A    M+   + G II  +SV GL       +Y AAK GV+GL +  
Sbjct: 133 IDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKHGVVGLMRAF 192

Query: 191 AKEYASRNINVNAIAPGFIASDMTAKLG----------------EDLEKKILEKIPLGRY 234
             E     I VN++ P  + + M    G                     ++   +P+   
Sbjct: 193 GVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMFHTLPIPW- 251

Query: 235 GQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 269
            +P +++  V F A +  A YITG  L ID G  +
Sbjct: 252 VEPIDISNAVLFFA-SDEARYITGVTLPIDAGSCL 285

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score =  265 bits (679), Expect = 3e-89
 Identities = 52/248 (20%), Positives = 94/248 (37%), Gaps = 17/248 (6%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEA------EEVCKEIEASGGQALTF 81
              ++G SRGIG A+A  +   G  V +    +              KEIE +GGQAL  
Sbjct: 11  TMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPI 70

Query: 82  GGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFL 141
            GD+     V + +   V+ +G +DI +NNA       +  +   ++  +  + + G + 
Sbjct: 71  VGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYA 130

Query: 142 CTQAAAKIMMKKKKGRIINIASVVGL-VGNIGQANYSAAKAGVIGLTKTVAKEYASRNIN 200
            +Q+    M  +    I+ ++  + L    +    Y  AK G+      +A+E     I 
Sbjct: 131 VSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRPTPYMMAKYGMTLCALGIAEELRDAGIA 190

Query: 201 VNAIAPG-FIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQ 259
            N + P   +A+     L       +     + R  +PE  A     +         TG 
Sbjct: 191 SNTLWPRTTVATAAVQNL-------LGGDEAMARSRKPEVYADAAYVVL--NKPSSYTGN 241

Query: 260 VLTIDGGM 267
            L  +  +
Sbjct: 242 TLLCEDVL 249

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score =  264 bits (677), Expect = 3e-89
 Identities = 83/264 (31%), Positives = 133/264 (50%), Gaps = 20/264 (7%)

Query: 19  EAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQA 78
            A ++V+  VAV+TG + G+G A A  L   G   ++     +   E   K++   G   
Sbjct: 5   AACRSVKGLVAVITGGASGLGLATAERLVGQGASAVLLD-LPNSGGEAQAKKL---GNNC 60

Query: 79  LTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKS------QWQDVI 132
           +    DV+ E DV++ +  A   +G VD+ +N AGI   +    +KK        +Q V+
Sbjct: 61  VFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVL 120

Query: 133 DLNLTGVFLCTQAAAKIMMKKK------KGRIINIASVVGLVGNIGQANYSAAKAGVIGL 186
           D+NL G F   +  A  M + +      +G IIN ASV    G +GQA YSA+K G++G+
Sbjct: 121 DVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGM 180

Query: 187 TKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPL-GRYGQPEEVAGLVE 245
           T  +A++ A   I V  IAPG   + +   L E +   +  ++P   R G P E A LV+
Sbjct: 181 TLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFPSRLGDPAEYAHLVQ 240

Query: 246 FLALNPAAGYITGQVLTIDGGMVM 269
            +  NP   ++ G+V+ +DG + M
Sbjct: 241 AIIENP---FLNGEVIRLDGAIRM 261

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score =  261 bits (670), Expect = 3e-88
 Identities = 52/242 (21%), Positives = 102/242 (42%), Gaps = 4/242 (1%)

Query: 21  AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALT 80
           +         V GA   IG  +A      G  V     R+ ++   +  EIEA+GG+ + 
Sbjct: 2   SLTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAG-RRNGEKLAPLVAEIEAAGGRIVA 60

Query: 81  FGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVF 140
              D   E +V + +  A DA   +++ I N G   +  ++      ++ V ++     F
Sbjct: 61  RSLDARNEDEVTAFLN-AADAHAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGF 119

Query: 141 LCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNIN 200
           +  + +A++M+   +G+I    +   L G  G A +++AK G+  + +++A+E   +NI+
Sbjct: 120 VSGRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASAKFGLRAVAQSMARELMPKNIH 179

Query: 201 V-NAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQ 259
           V + I    + +    +  E +  K     P      P  VAG    L   P + +    
Sbjct: 180 VAHLIIDSGVDTAWVRERREQMFGKDALANP-DLLMPPAAVAGAYWQLYQQPKSAWTFEM 238

Query: 260 VL 261
            +
Sbjct: 239 EI 240

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score =  261 bits (669), Expect = 4e-88
 Identities = 80/253 (31%), Positives = 120/253 (47%), Gaps = 18/253 (7%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           V +VTGAS G+G AV   L + G  VL          EE   E+   G        DV+ 
Sbjct: 9   VFIVTGASSGLGAAVTRMLAQEGATVLGLD-LKPPAGEEPAAEL---GAAVRFRNADVTN 64

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKK----SQWQDVIDLNLTGVFLCT 143
           EAD  + +  A   +G V  L+N AG      ++          +   + +NL G F   
Sbjct: 65  EADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMI 124

Query: 144 QAAAKIMMKKK------KGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASR 197
           + AA++M + +      +G I+N AS+    G IGQA Y+A+K GV  LT   A+E A  
Sbjct: 125 RLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIGQAAYAASKGGVAALTLPAARELARF 184

Query: 198 NINVNAIAPGFIASDMTAKLGEDLEKKILEKIPL-GRYGQPEEVAGLVEFLALNPAAGYI 256
            I V  IAPG   + M A + +D++  +   +P   R G+ EE A LV+ +  N     +
Sbjct: 185 GIRVVTIAPGIFDTPMMAGMPQDVQDALAASVPFPPRLGRAEEYAALVKHICENT---ML 241

Query: 257 TGQVLTIDGGMVM 269
            G+V+ +DG + M
Sbjct: 242 NGEVIRLDGALRM 254

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score =  258 bits (662), Expect = 3e-87
 Identities = 75/253 (29%), Positives = 121/253 (47%), Gaps = 28/253 (11%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
            A+VTG + G+GRA A +L   G +V+V               +   G   +   GDV++
Sbjct: 4   SALVTGGASGLGRAAALALKARGYRVVVLD-------------LRREGEDLIYVEGDVTR 50

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKK----SQWQDVIDLNLTGVFLCT 143
           E DV   +  A      +  +++ AG+     ++  +       ++ V+++NL G F   
Sbjct: 51  EEDVRRAVARAQ-EEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVL 109

Query: 144 QAAAKIMMKKK------KGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASR 197
           + AA  M +        +G I+N ASV    G IGQA Y+A+K GV+ LT   A+E A  
Sbjct: 110 RLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGW 169

Query: 198 NINVNAIAPGFIASDMTAKLGEDLEKKILEKIPL-GRYGQPEEVAGLVEFLALNPAAGYI 256
            I V  +APG   + +   L E  +  +  ++P   R G+PEE A LV  +  NP    +
Sbjct: 170 GIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFPPRLGRPEEYAALVLHILENP---ML 226

Query: 257 TGQVLTIDGGMVM 269
            G+V+ +DG + M
Sbjct: 227 NGEVVRLDGALRM 239

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score =  259 bits (664), Expect = 5e-87
 Identities = 73/254 (28%), Positives = 116/254 (45%), Gaps = 19/254 (7%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
            A+V+G + G+G A    L   G  V++    + K  + +  E+   G +A     +V+ 
Sbjct: 32  SAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEK-GKALADEL---GNRAEFVSTNVTS 87

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKS-----QWQDVIDLNLTGVFLC 142
           E  V + I+ A         ++ + G      +++   S      +   IDL L G +  
Sbjct: 88  EDSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNV 147

Query: 143 TQAAAKIMMKKK------KGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYAS 196
            +  A  +   +      +G ++  AS+ G  G IGQ  Y+AAKAGVIGLT   A++ +S
Sbjct: 148 ARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQTAYAAAKAGVIGLTIAAARDLSS 207

Query: 197 RNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPL-GRYGQPEEVAGLVEFLALNPAAGY 255
             I VN IAPG + + +   +GE+   K    IP   R G P+E A    FL  N    Y
Sbjct: 208 AGIRVNTIAPGTMKTPIMESVGEEALAKFAANIPFPKRLGTPDEFADAAAFLLTNG---Y 264

Query: 256 ITGQVLTIDGGMVM 269
           I G+V+ +DG    
Sbjct: 265 INGEVMRLDGAQRF 278

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score =  258 bits (662), Expect = 6e-87
 Identities = 71/248 (28%), Positives = 115/248 (46%), Gaps = 13/248 (5%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA+VTG + G+G  V   L   G KV  +   +    +++  E+   G +++    DVS 
Sbjct: 8   VALVTGGASGVGLEVVKLLLGEGAKVAFSD-INEAAGQQLAAEL---GERSMFVRHDVSS 63

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
           EAD   ++       GT+++L+NNAGI     +   +   +  ++ +N   VF+  Q   
Sbjct: 64  EADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGI 123

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRN--INVNAIA 205
              MK+  G IIN+ASV   +     A YSA+KA V  LT+  A     +   I VN+I 
Sbjct: 124 AA-MKETGGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIH 182

Query: 206 PGFIASDMTAKL-----GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQV 260
           P  I + M          +++     +    GR   PE +A LV FLA +  +  ++G  
Sbjct: 183 PDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLA-SDESSVMSGSE 241

Query: 261 LTIDGGMV 268
           L  D  ++
Sbjct: 242 LHADNSIL 249

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score =  254 bits (651), Expect = 2e-85
 Identities = 85/255 (33%), Positives = 133/255 (52%), Gaps = 24/255 (9%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VAVVTG + G+G A    L  AG +V+V   R     E+V  ++   G +A     DV+ 
Sbjct: 11  VAVVTGGASGLGLATTKRLLDAGAQVVVLDIR----GEDVVADL---GDRARFAAADVTD 63

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMR----MKKSQWQDVIDLNLTGVFLCT 143
           EA V S +  A +  GT+ I++N AG      ++        + ++ ++D+NL G F   
Sbjct: 64  EAAVASALDLA-ETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVL 122

Query: 144 QAAAKIMMK--------KKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYA 195
           + AA+ + K        +++G IIN ASV    G IGQA YSA+K GV+G+T  +A++ A
Sbjct: 123 RLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLA 182

Query: 196 SRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPL-GRYGQPEEVAGLVEFLALNPAAG 254
           S  I V  IAPG   + + A L E+    + +++P   R G P+E   L   +  NP   
Sbjct: 183 SHRIRVMTIAPGLFDTPLLASLPEEARASLGKQVPHPSRLGNPDEYGALAVHIIENP--- 239

Query: 255 YITGQVLTIDGGMVM 269
            + G+V+ +DG + M
Sbjct: 240 MLNGEVIRLDGAIRM 254

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score =  254 bits (652), Expect = 4e-85
 Identities = 71/248 (28%), Positives = 122/248 (49%), Gaps = 11/248 (4%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA++TG + GIG   A    + G KV++    +    ++VC  I +          DV+K
Sbjct: 18  VAIITGGAGGIGETTAKLFVRYGAKVVIA-DIADDHGQKVCNNIGS-PDVISFVHCDVTK 75

Query: 88  EADVESMIKTAVDAWGTVDILINNAGI--TRDTLLMRMKKSQWQDVIDLNLTGVFLCTQA 145
           + DV +++ T +   G +DI+  N G+  T    ++      ++ V+D+N+ G FL  + 
Sbjct: 76  DEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKH 135

Query: 146 AAKIMMKKKKGRIINIASVVGLVGNIGQAN-YSAAKAGVIGLTKTVAKEYASRNINVNAI 204
           AA++M+  KKG I+  AS+       G ++ Y+A K  V+GLT ++  E     I VN +
Sbjct: 136 AARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCV 195

Query: 205 APGFIASDMTAKLGEDLEKKILEK-----IPLGRYGQPEEVAGLVEFLALNPAAGYITGQ 259
           +P  +AS +   +      ++ E         G   + E+VA  V +LA    + Y++G 
Sbjct: 196 SPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLA-GDESKYVSGL 254

Query: 260 VLTIDGGM 267
            L IDGG 
Sbjct: 255 NLVIDGGY 262

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score =  250 bits (640), Expect = 1e-83
 Identities = 55/250 (22%), Positives = 95/250 (38%), Gaps = 16/250 (6%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           V  +TG++ GIG A+   L +AG  V+           ++  ++   GG+       + +
Sbjct: 3   VIAITGSASGIGAALKELLARAGHTVIGIDRG----QADIEADLSTPGGRETAVAAVLDR 58

Query: 88  EAD-----VESMIKTAVDAWGTVDILINNAGITR--DTLLMRMKKSQWQDVIDLNLTGVF 140
                   V         A   + + +N  G++   D L   + + Q    + +      
Sbjct: 59  CGGVLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAAT 118

Query: 141 LCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNIN 200
               A   ++     G       +    G      Y+ +K  V  L +    ++A R + 
Sbjct: 119 QPGAAELPMVEAMLAGDEARAIELAEQQGQ-THLAYAGSKYAVTCLARRNVVDWAGRGVR 177

Query: 201 VNAIAPGFIASDMTAKLGED---LEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYIT 257
           +N +APG + + +      D    E       PLGR  +P EVA  + FL   P A +I 
Sbjct: 178 LNVVAPGAVETPLLQASKADPRYGESTRRFVAPLGRGSEPREVAEAIAFLL-GPQASFIH 236

Query: 258 GQVLTIDGGM 267
           G VL +DGGM
Sbjct: 237 GSVLFVDGGM 246

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score =  245 bits (627), Expect = 7e-82
 Identities = 52/239 (21%), Positives = 101/239 (42%), Gaps = 13/239 (5%)

Query: 23  NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFG 82
           +++  +AVVTGA+ G+G  +   L +      +   R+ +    + +       ++    
Sbjct: 2   SLKKKIAVVTGATGGMGIEIVKDLSRDHIVYAL--GRNPEHLAALAEIEGVEPIES---- 55

Query: 83  GDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLC 142
            D+ KE   E  +   +     VD L++ A + RDT +     ++W   +DLN+      
Sbjct: 56  -DIVKEVLEEGGVD-KLKNLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAEL 113

Query: 143 TQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
           ++      ++   G +I I S  G   + G   Y+A+K  + GL     KE A+  I V+
Sbjct: 114 SRQLLP-ALRAASGCVIYINSGAGNGPHPGNTIYAASKHALRGLADAFRKEEANNGIRVS 172

Query: 203 AIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL 261
            ++PG   + M   L +        +I +    +P+E+A  + F+        IT   +
Sbjct: 173 TVSPGPTNTPMLQGLMDSQGTNFRPEIYI----EPKEIANAIRFVIDAGETTQITNVDV 227

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score =  248 bits (634), Expect = 1e-81
 Identities = 61/247 (24%), Positives = 105/247 (42%), Gaps = 20/247 (8%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAE------EVCKEIEASGGQALTF 81
              +TGASRGIG+A+A    K G  +++    +    +         +EIEA GG+AL  
Sbjct: 47  TVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPC 106

Query: 82  GGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFL 141
             DV  E  + + ++ A+  +G +DIL+NNA     T  +     +   ++++N  G +L
Sbjct: 107 IVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYL 166

Query: 142 CTQAAAKIMMKKKKGRIINIASVVGLVGNI--GQANYSAAKAGVIGLTKTVAKEYASRNI 199
            ++A    + K K   I+NI+  + L          Y+ AK G+      +A+E+    I
Sbjct: 167 ASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVLGMAEEFKG-EI 225

Query: 200 NVNAIAPG-FIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITG 258
            VNA+ P   I +     LG    +    K         + +A     +   P     TG
Sbjct: 226 AVNALWPKTAIHTAAMDMLGGPGIESQCRK--------VDIIADAAYSIFQKPK--SFTG 275

Query: 259 QVLTIDG 265
             +  + 
Sbjct: 276 NFVIDEN 282

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score =  243 bits (622), Expect = 3e-81
 Identities = 46/242 (19%), Positives = 98/242 (40%), Gaps = 14/242 (5%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
             +VTGA  G+GRA+   L + G +V +   R  +  ++    +   G   +    D++ 
Sbjct: 5   HIIVTGAGSGLGRALTIGLVERGHQVSMM-GRRYQRLQQQELLL---GNAVIGIVADLAH 60

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
             DV+     AV+  G  +++++ AG      +      Q + V++ NL    L  Q   
Sbjct: 61  HEDVDVAFAAAVEWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTV 120

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
           + ++ ++ G + N+ S    VG   ++ Y A+K G+ G  +++  E     + +  + P 
Sbjct: 121 R-LIGERGGVLANVLSSAAQVGKANESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPS 179

Query: 208 FIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM 267
            I S+                +    +  PE+ A  +       ++ ++T   +  + G 
Sbjct: 180 GIRSEFWDNTDH---------VDPSGFMTPEDAAAYMLDALEARSSCHVTDLFIGRNEGH 230

Query: 268 VM 269
             
Sbjct: 231 HH 232

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score =  243 bits (623), Expect = 6e-77
 Identities = 96/249 (38%), Positives = 128/249 (51%), Gaps = 23/249 (9%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVN--------YARSSKEAEEVCKEIEASGGQAL 79
           VAVVTGA  G+GR  A    + G KV+VN           S + A+ V  EI  +GG+A+
Sbjct: 21  VAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAV 80

Query: 80  TFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGV 139
                V    D   +I+TA+ A+G VDIL+NNAGI RD  L++  +  W  V D++L G 
Sbjct: 81  ADYNSV---IDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGS 137

Query: 140 FLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNI 199
           F CTQAA   M K+  GRII  +S  G+ GN GQ NY+AAK G+IGL  TVA E A  N+
Sbjct: 138 FKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQVNYTAAKMGLIGLANTVAIEGARNNV 197

Query: 200 NVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQ 259
             N I P   AS MT  +  D+    L         +P+ +A +V +L          G 
Sbjct: 198 LCNVIVP-TAASRMTEGILPDILFNEL---------KPKLIAPVVAYLCHESCE--DNGS 245

Query: 260 VLTIDGGMV 268
            +    G  
Sbjct: 246 YIESAAGWA 254

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score =  227 bits (581), Expect = 8e-75
 Identities = 40/242 (16%), Positives = 70/242 (28%), Gaps = 26/242 (10%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
             +V G S  +G  V           +                   +     +F    S 
Sbjct: 24  NILVLGGSGALGAEVVKFFKSKSWNTISID-------------FRENPNADHSFTIKDSG 70

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRD-TLLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
           E +++S+I+        VD  +  AG                + +ID+NL   F      
Sbjct: 71  EEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIG 130

Query: 147 AKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYA--SRNINVNAI 204
           AK++   + G  +   +   L    G   Y A KA    + K +A E            I
Sbjct: 131 AKLL--NQGGLFVLTGASAALNRTSGMIAYGATKAATHHIIKDLASENGGLPAGSTSLGI 188

Query: 205 APGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTID 264
            P  + +    K   D             +    EVA  +   + N  +    G ++  +
Sbjct: 189 LPVTLDTPTNRKYMSD--------ANFDDWTPLSEVAEKLFEWSTNSDSRPTNGSLVKFE 240

Query: 265 GG 266
             
Sbjct: 241 TK 242

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score =  212 bits (541), Expect = 1e-68
 Identities = 61/256 (23%), Positives = 101/256 (39%), Gaps = 24/256 (9%)

Query: 28  VAVVTGASRGIGRAVATSLGK---AGCKVLVNYARSSKEAEEVCKEIEAS--GGQALTFG 82
           V V+TGASRG GRA+A  L +    G  +LV+ ARS     ++ +E+ A     + +   
Sbjct: 8   VCVLTGASRGFGRALAPQLARLLSPGSVMLVS-ARSESMLRQLKEELGAQQPDLKVVLAA 66

Query: 83  GDVSKEADVESMIKTAVDAWGT----VDILINNAGITRDTLLMRMKKS---QWQDVIDLN 135
            D+  EA V+ ++    +          +LINNA    D     +  +   +  +   LN
Sbjct: 67  ADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALN 126

Query: 136 LTGVFLCTQAAAKIMMKKK--KGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKE 193
           LT +   T                ++NI+S+  L    G   Y A KA    L + +A E
Sbjct: 127 LTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQVLAAE 186

Query: 194 YASRNINVNAIAPGFIASDMTAKLGE-----DLEKKILEKIPLGRYGQPEEVAGLVEFLA 248
               ++ V + APG + +DM     E     +L  K+ +    G        A  +  L 
Sbjct: 187 --EPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKLLGLL 244

Query: 249 LNPAAGYITGQVLTID 264
                 + +G  +   
Sbjct: 245 QKDT--FQSGAHVDFY 258

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score =  211 bits (538), Expect = 9e-68
 Identities = 62/253 (24%), Positives = 101/253 (39%), Gaps = 12/253 (4%)

Query: 3   HAGIRAQVATIEQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSK 62
           H G          + +      +   AVVTG + GIG A AT   + G +++++      
Sbjct: 8   HMGTLEAQTQGPGSMDGFLSGFDGRAAVVTGGASGIGLATATEFARRGARLVLS-DVDQP 66

Query: 63  EAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMR 122
             E+    +   G  A     DV    ++  +   A    G VD++ +NAGI     L +
Sbjct: 67  ALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQ 126

Query: 123 MKKSQWQDVIDLNLTGVFLCTQAAAKIMMK-KKKGRIINIASVVGLVGNIGQANYSAAKA 181
           M    W+ VID++L G     +A    +++    G I   AS  GLV N G   Y  AK 
Sbjct: 127 MNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKY 186

Query: 182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTA----------KLGEDLEKKILEKIPL 231
           GV+GL +T+A+E     I V+ + P  + + + +           +    E         
Sbjct: 187 GVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQ 246

Query: 232 GRYGQPEEVAGLV 244
                 ++VA L 
Sbjct: 247 DESVSADDVARLT 259

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score =  199 bits (509), Expect = 7e-64
 Identities = 54/267 (20%), Positives = 96/267 (35%), Gaps = 44/267 (16%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           + V++G + GIG A    L  AG +++    R   +AE +                D+S 
Sbjct: 3   IIVISGCATGIGAATRKVLEAAGHQIVGIDIR---DAEVIA---------------DLST 44

Query: 88  EADVESMIKTAV-DAWGTVDILINNAGITRDT--------------------LLMRMKKS 126
               +  I   +      +D L+  AG+   T                     L  +KK 
Sbjct: 45  AEGRKQAIADVLAKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKG 104

Query: 127 QWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNI-GQANYSAAKAGVIG 185
                + ++             + +  + G      ++V   G   G   Y+ +K  +  
Sbjct: 105 HQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTV 164

Query: 186 LTKTVAKEYASRNINVNAIAPGFIASDMTAKLGED---LEKKILEKIPLGRYGQPEEVAG 242
             +  A  +    + +N IAPG   + +     +D    E       P+GR  +P E+A 
Sbjct: 165 AVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRRAEPSEMAS 224

Query: 243 LVEFLALNPAAGYITGQVLTIDGGMVM 269
           ++ FL   PAA Y+ G  + IDGG+  
Sbjct: 225 VIAFLMS-PAASYVHGAQIVIDGGIDA 250

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score =  188 bits (479), Expect = 1e-59
 Identities = 31/242 (12%), Positives = 69/242 (28%), Gaps = 23/242 (9%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
             +V G    +G     +       V       ++EA              +      ++
Sbjct: 9   RVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASA---------SVIVKMTDSFTE 59

Query: 88  EADVESMIKTAVDAWGTVDILINNAG-ITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
           +AD  +     +     VD ++  AG         +        +   ++    + +  A
Sbjct: 60  QADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLA 119

Query: 147 AKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYAS--RNINVNAI 204
            K +  K+ G +    +   L G  G   Y  AK  V  L +++A + +         A+
Sbjct: 120 TKHL--KEGGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAV 177

Query: 205 APGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTID 264
            P  + + M  K   +             +   E +                +G ++ + 
Sbjct: 178 LPVTLDTPMNRKSMPE--------ADFSSWTPLEFLVETFHDWI-TGNKRPNSGSLIQVV 228

Query: 265 GG 266
             
Sbjct: 229 TT 230

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score =  188 bits (480), Expect = 4e-59
 Identities = 58/217 (26%), Positives = 92/217 (42%), Gaps = 13/217 (5%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQ-ALTFGGDVS 86
             +VTGAS+GIGR +A  L K G  V+V  ARS +  ++V       G   A    G + 
Sbjct: 30  KVIVTGASKGIGREMAYHLAKMGAHVVVT-ARSKETLQKVVSHCLELGAASAHYIAGTME 88

Query: 87  KEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
                E  +  A    G +D+LI N        L        +  +++N     + T AA
Sbjct: 89  DMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAA 148

Query: 147 AKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASR--NINVNAI 204
              M+K+  G I+ ++S+ G V     A YSA+K  + G   ++ KEY+    N+++   
Sbjct: 149 LP-MLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLC 207

Query: 205 APGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVA 241
             G I ++           K +  I   +    EE A
Sbjct: 208 VLGLIDTETA--------MKAVSGIVHMQAAPKEECA 236

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score =  187 bits (476), Expect = 1e-58
 Identities = 57/217 (26%), Positives = 89/217 (41%), Gaps = 14/217 (6%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           + ++TGA  GIGR  A    K   K+++    +    EE   + +  G +  TF  D S 
Sbjct: 33  IVLITGAGHGIGRLTAYEFAKLKSKLVLW-DINKHGLEETAAKCKGLGAKVHTFVVDCSN 91

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
             D+ S  K      G V IL+NNAG+   + L   +  Q +   ++N+   F  T+A  
Sbjct: 92  REDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFL 151

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASR---NINVNAI 204
             M K   G I+ +AS  G V       Y ++K   +G  KT+  E A+     +    +
Sbjct: 152 PAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCL 211

Query: 205 APGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVA 241
            P F+ +                   LG   +PEEV 
Sbjct: 212 CPNFVNTGFIKNP----------STSLGPTLEPEEVV 238

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score =  183 bits (466), Expect = 1e-57
 Identities = 67/225 (29%), Positives = 105/225 (46%), Gaps = 16/225 (7%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
             ++TGASRGIG A A  L   G +V +  AR  K  + +  E+E     AL   GDV +
Sbjct: 7   AVLITGASRGIGEATARLLHAKGYRVGLM-ARDEKRLQALAAELEG----ALPLPGDVRE 61

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
           E D    +    +A+G +  L+NNAG+     +  +   +W+ V+D NLTG FL  + A 
Sbjct: 62  EGDWARAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAV 121

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
             ++++  G I+N+ S+ G     G A Y+A+K G++GL      +    N+ V  + PG
Sbjct: 122 PALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPG 181

Query: 208 FIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPA 252
            + +                   L    +PE+VA  V F    P 
Sbjct: 182 SVDTGFAGNTPGQAW-------KL----KPEDVAQAVLFALEMPG 215

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score =  182 bits (464), Expect = 2e-57
 Identities = 36/244 (14%), Positives = 79/244 (32%), Gaps = 26/244 (10%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
             +V G    +G A+     K G  VL     ++ +A+             +   G+ + 
Sbjct: 5   KVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADS-----------NILVDGNKNW 53

Query: 88  EADVESMIKTAVDA--WGTVDILINNAGI-TRDTLLMRMKKSQWQDVIDLNLTGVFLCTQ 144
               +S+++    +     VD +   AG     +   +        +I  ++    +  +
Sbjct: 54  TEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAK 113

Query: 145 AAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYAS--RNINVN 202
            A   +  K  G +    +   +        Y  AKA V  LT ++A + +    N  V 
Sbjct: 114 LATTHL--KPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVL 171

Query: 203 AIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLT 262
            I P  + + M  K   + +           +     ++  +       ++   +G +L 
Sbjct: 172 TIMPVTLDTPMNRKWMPNAD--------HSSWTPLSFISEHLLKWTTETSSRPSSGALLK 223

Query: 263 IDGG 266
           I   
Sbjct: 224 ITTE 227

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score =  174 bits (443), Expect = 1e-54
 Identities = 44/216 (20%), Positives = 89/216 (41%), Gaps = 26/216 (12%)

Query: 29  AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKE 88
            ++TGA+ G+G A A +L   G  +L++  R +    E+ +E+   G +AL    D++ E
Sbjct: 3   VLITGATGGLGGAFARAL--KGHDLLLS-GRRAGALAELAREV---GARALP--ADLADE 54

Query: 89  ADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAK 148
            + ++     ++  G +D+L++  G      +    +   ++++  +L       +    
Sbjct: 55  LEAKA----LLEEAGPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKH--- 107

Query: 149 IMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGF 208
               +K  R +   +    V   G A Y+AAK  +    +   KE     +++  +    
Sbjct: 108 -ARFQKGARAVFFGAYPRYVQVPGFAAYAAAKGALEAYLEAARKELLREGVHLVLVRLPA 166

Query: 209 IASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLV 244
           +A+ + A LG           P      PEE A  V
Sbjct: 167 VATGLWAPLGG----------PPKGALSPEEAARKV 192

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score =  175 bits (445), Expect = 1e-53
 Identities = 49/237 (20%), Positives = 90/237 (37%), Gaps = 21/237 (8%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEA--SGGQALTFGGDV 85
            A VTG + G+G  +   L   GCKV +         ++    +EA  SG + +    DV
Sbjct: 10  TAFVTGGANGVGIGLVRQLLNQGCKVAIA-DIRQDSIDKALATLEAEGSGPEVMGVQLDV 68

Query: 86  SKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQA 145
           +     +         +G V IL NNAG+     +       W  ++ +NL GV      
Sbjct: 69  ASREGFKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTT 128

Query: 146 AAKIMMKKKK------GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNI 199
               M+++ K      G ++N AS+   +       Y+  K  V GL++++        I
Sbjct: 129 FVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAVRGLSESLHYSLLKYEI 188

Query: 200 NVNAIAPGFIASDM-----------TAKLGEDLEKKILEKIPLGRYGQ-PEEVAGLV 244
            V+ + PG + S +             ++    +  +     +  +G  P+ +   V
Sbjct: 189 GVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGMEPDVIGARV 245

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score =  171 bits (435), Expect = 5e-53
 Identities = 59/227 (25%), Positives = 105/227 (46%), Gaps = 15/227 (6%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEI-EASGGQALTFGGDVS 86
           VAV+TGASRGIG A+A +L + G  + +  ARS    E++  E+ +  G +      DVS
Sbjct: 4   VAVITGASRGIGEAIARALARDGYALALG-ARSVDRLEKIAHELMQEQGVEVFYHHLDVS 62

Query: 87  KEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
           K   VE   K  ++ +G VD+++ NAG+     L  + + ++ ++I++NL GV+   +A 
Sbjct: 63  KAESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAF 122

Query: 147 AKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
              + +     ++  + V   +       Y + K     L +T   E  + ++    + P
Sbjct: 123 LDSLKRTGGLALVTTSDVSARL-IPYGGGYVSTKWAARALVRTFQIE--NPDVRFFELRP 179

Query: 207 GFIASDMTAKL-GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPA 252
           G + +       G+  EK  L         +P+E+A  V  L   P 
Sbjct: 180 GAVDTYFGGSKPGKPKEKGYL---------KPDEIAEAVRCLLKLPK 217

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score =  168 bits (427), Expect = 3e-52
 Identities = 40/235 (17%), Positives = 74/235 (31%), Gaps = 39/235 (16%)

Query: 29  AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKE 88
            ++ GAS  +G AV   L K                     E+  +G  +     D++  
Sbjct: 6   ILLIGASGTLGSAVKERLEKKA-------------------EVITAGRHSGDVTVDITNI 46

Query: 89  ADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAK 148
             ++ M     +  G VD +++  G    + L  +   +    I   L G          
Sbjct: 47  DSIKKM----YEQVGKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGID 102

Query: 149 IMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGF 208
            +    KG       ++     +  A+ + A   V    K+ A E   R I +N ++P  
Sbjct: 103 SL--NDKGSFTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAAIEMP-RGIRINTVSPNV 159

Query: 209 IASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTI 263
           +      KL    E      +P  +  +  E +            G  TG+   +
Sbjct: 160 LEESWD-KLEPFFEG--FLPVPAAKVARAFEKS----------VFGAQTGESYQV 201

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score =  169 bits (431), Expect = 5e-52
 Identities = 77/228 (33%), Positives = 115/228 (50%), Gaps = 10/228 (4%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           V ++TGAS GIG  +A  LG AG K+L+  AR     E +  EI  +GG AL    DV+ 
Sbjct: 6   VILITGASGGIGEGIARELGVAGAKILLG-ARRQARIEAIATEIRDAGGTALAQVLDVTD 64

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
              V +  + AVD WG +D+L+NNAG+   + L  +K  +W+ +ID+N+ GV     A  
Sbjct: 65  RHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVL 124

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
            IM  ++ G+IINI S+  L      A Y A K  V  ++  + +E  S NI V  + PG
Sbjct: 125 PIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVRAISDGLRQE--STNIRVTCVNPG 182

Query: 208 FIASDMTAKL-GEDLEK--KILEKIPLGRYGQPEEVAGLVEFLALNPA 252
            + S++   +  E+          I L    QP ++A  V  +   P 
Sbjct: 183 VVESELAGTITHEETMAAMDTYRAIAL----QPADIARAVRQVIEAPQ 226

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score =  165 bits (420), Expect = 8e-51
 Identities = 48/233 (20%), Positives = 89/233 (38%), Gaps = 18/233 (7%)

Query: 27  PVAVVTGASRGIGRAVATSLGKAGCK-VLVNYARSSKEAEEVCKEIEASGGQALTFGGDV 85
            + V+TGAS G+G  +A      G    L    RS  +   V   +            D+
Sbjct: 2   SLIVITGASSGLGAELAKLYDAEGKATYLT--GRSESKLSTVTNCL---SNNVGYRARDL 56

Query: 86  SKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQA 145
           +   +VE + +           ++++AG     LL      Q Q +I+ NL+      + 
Sbjct: 57  ASHQEVEQLFE---QLDSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRE 113

Query: 146 AAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIA 205
             K   K +   ++ I S         ++ Y A K  V GL ++V  E   + + + A+ 
Sbjct: 114 LVKRY-KDQPVNVVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVY 172

Query: 206 PGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITG 258
           PG +A++     G+ L+           +   E+ A ++     N   GY++ 
Sbjct: 173 PGGMATEFWETSGKSLDTS--------SFMSAEDAALMIHGALANIGNGYVSD 217

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score =  162 bits (412), Expect = 2e-49
 Identities = 67/237 (28%), Positives = 115/237 (48%), Gaps = 11/237 (4%)

Query: 21  AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALT 80
              ++  VA++TGAS GIG A A +L   G  V +  AR  ++   +  E+ A+G +   
Sbjct: 2   PSALQGKVALITGASSGIGEATARALAAEGAAVAIA-ARRVEKLRALGDELTAAGAKVHV 60

Query: 81  FGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVF 140
              DV+    V++ + + V+A G +DIL+NNAGI     +     + W  +ID NL G+ 
Sbjct: 61  LELDVADRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLM 120

Query: 141 LCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNIN 200
             T+AA    + + KG ++ ++S+ G V     A Y A K GV   ++T+ +E   R + 
Sbjct: 121 YMTRAALPH-LLRSKGTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTERGVR 179

Query: 201 VNAIAPGFIASDMTAKL--GEDLEK--KILEKI-PLGRYGQPEEVAGLVEFLALNPA 252
           V  I PG   +++   +      E   + + +I  L    Q +++A  V +    P 
Sbjct: 180 VVVIEPGTTDTELRGHITHTATKEMYEQRISQIRKL----QAQDIAEAVRYAVTAPH 232

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score =  160 bits (408), Expect = 2e-48
 Identities = 79/233 (33%), Positives = 122/233 (52%), Gaps = 9/233 (3%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASG--GQALTFGGDV 85
           +A+VTGAS GIG AVA +L + G KV V  AR+    EE+  E +++G  G  + +  D+
Sbjct: 34  LALVTGASGGIGAAVARALVQQGLKV-VGCARTVGNIEELAAECKSAGYPGTLIPYRCDL 92

Query: 86  SKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQA 145
           S E D+ SM          VDI INNAG+ R   L+    S W+D+ ++N+  + +CT+ 
Sbjct: 93  SNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTRE 152

Query: 146 AAKIMMKKK--KGRIINIASVVGL-VGNIGQAN-YSAAKAGVIGLTKTVAKE--YASRNI 199
           A + M ++    G IINI S+ G  V  +   + YSA K  V  LT+ + +E   A  +I
Sbjct: 153 AYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELREAQTHI 212

Query: 200 NVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPA 252
               I+PG + +    KL +   +K        +  +PE+VA  V ++   PA
Sbjct: 213 RATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCLKPEDVAEAVIYVLSTPA 265

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score =  155 bits (393), Expect = 3e-46
 Identities = 58/236 (24%), Positives = 107/236 (45%), Gaps = 9/236 (3%)

Query: 19  EAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQA 78
           +  +     + V+TGAS GIG A+A    + G  +L+  AR  +  + +      +    
Sbjct: 9   QMGRGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLL-ARRVERLKAL------NLPNT 61

Query: 79  LTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTG 138
           L    DV+ +   ++ I  A   +G  D ++NNAG+     +   + ++WQ + D+N+ G
Sbjct: 62  LCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLG 121

Query: 139 VFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRN 198
           +    QA    M  +  G IINI+S+ G       A Y   K  V  +++ V +E A+ N
Sbjct: 122 LLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENVREEVAASN 181

Query: 199 INVNAIAPGFIASDMTAKL--GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPA 252
           + V  IAP  + +++ +     +  +     ++ +G     ++VA  V F    P 
Sbjct: 182 VRVMTIAPSAVKTELLSHTTSQQIKDGYDAWRVDMGGVLAADDVARAVLFAYQQPQ 237

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score =  149 bits (379), Expect = 2e-44
 Identities = 61/231 (26%), Positives = 98/231 (42%), Gaps = 14/231 (6%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           + +VTGA+ G G  +     + G KV+    R  +  +E+  E+   G        DV  
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIAT-GRRQERLQELKDEL---GDNLYIAQLDVRN 57

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDT-LLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
            A +E M+ +    W  +DIL+NNAG+        +     W+ +ID N  G+   T+A 
Sbjct: 58  RAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAV 117

Query: 147 AKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
              M+++  G IINI S  G     G   Y A KA V   +  +  +     + V  I P
Sbjct: 118 LPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEP 177

Query: 207 GFIASDMTA--KLGEDLEK--KILEKI-PLGRYGQPEEVAGLVEFLALNPA 252
           G +     +  +   D  K  K  +    L     PE+V+  V +++  PA
Sbjct: 178 GLVGGTEFSNVRFKGDDGKAEKTYQNTVAL----TPEDVSEAVWWVSTLPA 224

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score =  149 bits (379), Expect = 3e-44
 Identities = 54/239 (22%), Positives = 98/239 (41%), Gaps = 12/239 (5%)

Query: 20  AAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQAL 79
              +  +    +TGA+ G G A A    +AG  +++   R  +  + +  E+ A   + L
Sbjct: 15  PRGSHMSSTLFITGATSGFGEACARRFAEAGWSLVLT-GRREERLQALAGELSA-KTRVL 72

Query: 80  TFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDT-LLMRMKKSQWQDVIDLNLTG 138
               DV   A + + +    + + T+  LINNAG+   T          W  ++D N+ G
Sbjct: 73  PLTLDVRDRAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKG 132

Query: 139 VFLCTQAAAKIMMKKKKGR-IINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASR 197
           +   T+     ++    G  I+N+ SV G     G   Y   KA V   +  +  +    
Sbjct: 133 LLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLRCDLQGT 192

Query: 198 NINVNAIAPGFIASDMTA-KLGEDLEK--KILEKI-PLGRYGQPEEVAGLVEFLALNPA 252
            + V  + PG   S+ +  + G D  +  K      P+    QPE++A  + ++   PA
Sbjct: 193 GVRVTNLEPGLCESEFSLVRFGGDQARYDKTYAGAHPI----QPEDIAETIFWIMNQPA 247

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score =  150 bits (380), Expect = 4e-44
 Identities = 63/243 (25%), Positives = 112/243 (46%), Gaps = 13/243 (5%)

Query: 19  EAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKV--LVNYARSSKEAEEVCKEIEAS-- 74
           +AA+ +     ++TGAS GIG+A A    +A      L+  AR  ++ EE+ K I+    
Sbjct: 26  KAAERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFP 85

Query: 75  GGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDT-LLMRMKKSQWQDVID 133
             +      D+++   ++  I+     +  +DIL+NNAG    +  + ++     QDV D
Sbjct: 86  NAKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFD 145

Query: 134 LNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKE 193
            N+T +   TQA   I   K  G I+N+ S+ G       + Y A+K  V   T ++ KE
Sbjct: 146 TNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCASKFAVGAFTDSLRKE 205

Query: 194 YASRNINVNAIAPGFIASDMTA-KLGEDLEK--KILEKI-PLGRYGQPEEVAGLVEFLAL 249
             +  I V  IAPG + ++ +  +   + E+   + +   PL      ++VA L+ +   
Sbjct: 206 LINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKDTTPL----MADDVADLIVYATS 261

Query: 250 NPA 252
              
Sbjct: 262 RKQ 264

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score =  134 bits (339), Expect = 7e-38
 Identities = 51/191 (26%), Positives = 81/191 (42%), Gaps = 5/191 (2%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLV----NYARSSKEAEEVCKEIEASGGQALTFGG 83
           + ++TGAS G GR  A +L  AG +V         R++   E +      +     T   
Sbjct: 7   IILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLEL 66

Query: 84  DVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCT 143
           DV  +  V+  I   +   G +D+LI+NAG             Q+ ++ D+N+       
Sbjct: 67  DVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVN 126

Query: 144 QAAAKIMMKKKKGRIINIASVVGLVGNI-GQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
           +AA   M ++K G +I I+S     G     A Y AAKA +  +    A+E +   I  +
Sbjct: 127 RAALPHMRRQKHGLLIWISSSSSAGGTPPYLAPYFAAKAAMDAIAVQYARELSRWGIETS 186

Query: 203 AIAPGFIASDM 213
            I PG   S  
Sbjct: 187 IIVPGAFTSGT 197

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score =  132 bits (335), Expect = 1e-37
 Identities = 56/200 (28%), Positives = 101/200 (50%), Gaps = 4/200 (2%)

Query: 26  APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDV 85
           A V +VTGAS G GRA+A +   AG  V+   AR ++  +++   + A   +A     DV
Sbjct: 5   AKVWLVTGASSGFGRAIAEAAVAAGDTVIGT-ARRTEALDDL---VAAYPDRAEAISLDV 60

Query: 86  SKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQA 145
           +    ++ +    +  +G VD+L+NNAG T+        + + +D+ +L++ G    T+A
Sbjct: 61  TDGERIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRA 120

Query: 146 AAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIA 205
               M ++  G ++NI+S  G +   G + YSA KA +  L++ +A E A   I V  + 
Sbjct: 121 LLPQMRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVE 180

Query: 206 PGFIASDMTAKLGEDLEKKI 225
           PG   +++  K      ++ 
Sbjct: 181 PGAFRTNLFGKGAAYFSEEN 200

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score =  122 bits (309), Expect = 2e-33
 Identities = 49/205 (23%), Positives = 85/205 (41%), Gaps = 9/205 (4%)

Query: 27  PVAVVTGASRGIGRAVATSL---GKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGG 83
            V ++TG S GIG  +A  L        KV     R  K    + +   A      +   
Sbjct: 3   TVVLITGCSSGIGLHLAVRLASDPSQSFKVYAT-LRDLKTQGRLWEAARALACPPGSLET 61

Query: 84  ---DVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVF 140
              DV     V +  +   +  G VD+L+ NAG+     L  + +     V+D+N+ G  
Sbjct: 62  LQLDVRDSKSVAAARERVTE--GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTV 119

Query: 141 LCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNIN 200
              QA    M ++  GR++   SV GL+G      Y A+K  + GL +++A       ++
Sbjct: 120 RMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVH 179

Query: 201 VNAIAPGFIASDMTAKLGEDLEKKI 225
           ++ I  G + +    K+    E+ +
Sbjct: 180 LSLIECGPVHTAFMEKVLGSPEEVL 204

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score =  116 bits (292), Expect = 1e-31
 Identities = 47/209 (22%), Positives = 88/209 (42%), Gaps = 25/209 (11%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNY-ARSSKEAEEVCKEIEASGGQALTFGGDVS 86
             VVTGA+RGIG  +   L K      +   AR  ++A E+ K I+ S    L     V+
Sbjct: 5   SVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATEL-KSIKDSRVHVLPL--TVT 61

Query: 87  KEADVESMIKTAVDAWG--TVDILINNAGITRD-TLLMRMKKSQWQDVIDLNLTGVFLCT 143
            +  +++ +    +  G   + +LINNAG+           ++   + +D+N T V L T
Sbjct: 62  CDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLT 121

Query: 144 QA-----------AAKIMMKKKKGRIINIASVVGLVGN-------IGQANYSAAKAGVIG 185
           Q             +   +   +  +I I+S +G + +            Y  +KA +  
Sbjct: 122 QKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINM 181

Query: 186 LTKTVAKEYASRNINVNAIAPGFIASDMT 214
             +T+A +    N+ V    PG++ +++ 
Sbjct: 182 FGRTLAVDLKDDNVLVVNFCPGWVQTNLG 210

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score =  116 bits (292), Expect = 2e-31
 Identities = 35/208 (16%), Positives = 87/208 (41%), Gaps = 22/208 (10%)

Query: 27  PVAVVTGASRGIGRAVATSL---GKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGG 83
              ++TG +RG+G  +  +L    +    +     R+ ++A+E+ +++  +         
Sbjct: 22  NSILITGCNRGLGLGLVKALLNLPQPPQHLFT-TCRNREQAKEL-EDLAKNHSNIHILEI 79

Query: 84  DVSKEADVESMIKTAVDAWGT--VDILINNAGI-TRDTLLMRMKKSQWQDVIDLNLTGVF 140
           D+      + ++           +++L NNAGI  +   +  ++  +  D +  N     
Sbjct: 80  DLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPI 139

Query: 141 LCTQAAAKIMMKKKK-----------GRIINIASVVGLVGNIGQAN---YSAAKAGVIGL 186
           +  +A   ++ K  K             IIN++S++G +          Y  +K+ +   
Sbjct: 140 MLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAA 199

Query: 187 TKTVAKEYASRNINVNAIAPGFIASDMT 214
           TK+++ +   + I   ++ PG++ +DM 
Sbjct: 200 TKSLSVDLYPQRIMCVSLHPGWVKTDMG 227

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score =  116 bits (292), Expect = 4e-31
 Identities = 58/307 (18%), Positives = 102/307 (33%), Gaps = 94/307 (30%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGG-DVS 86
            AVVTG ++GIG  +   L   G  V++   R   +  E  ++++ S  + + F   DV+
Sbjct: 14  CAVVTGGNKGIGFEICKQLSSNGIMVVLT-CRDVTKGHEAVEKLKNSNHENVVFHQLDVT 72

Query: 87  KEAD-VESMIKTAVDAWGTVDILINNAGIT------------------------------ 115
                + S+       +G +DIL+NNAG+                               
Sbjct: 73  DPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKP 132

Query: 116 RDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNI---- 171
               LM       ++ + +N  GV   T+    ++      RI+N++S  G +  +    
Sbjct: 133 EAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSLKYVSNET 192

Query: 172 ---------------------------------------GQANYSAAKAGVIGLTKTVAK 192
                                                    A Y+ +KA +   T+ +A 
Sbjct: 193 ALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTRVLAN 252

Query: 193 EYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPA 252
           +       VN + PG + ++M   +G                   EE A  V  +AL P 
Sbjct: 253 KI--PKFQVNCVCPGLVKTEMNYGIGN---------------YTAEEGAEHVVRIALFPD 295

Query: 253 AGYITGQ 259
            G  +G 
Sbjct: 296 DG-PSGF 301

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score =  113 bits (285), Expect = 2e-30
 Identities = 45/237 (18%), Positives = 88/237 (37%), Gaps = 49/237 (20%)

Query: 28  VAVVTGASRGIGRAVATSLGKA-GCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVS 86
           VA+VTG ++GIG A+   L +     V++  AR     +   ++++A G        D+ 
Sbjct: 6   VALVTGGNKGIGLAIVRDLCRLFSGDVVL-TARDVTRGQAAVQQLQAEGLSPRFHQLDID 64

Query: 87  KEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
               + ++       +G +D+L+NNAGI            Q +  +  N  G        
Sbjct: 65  DLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTEL 124

Query: 147 AKIMMKKKKGRIINIASVVGLVGNIGQAN------------------------------- 175
             ++  K +GR++N++S++ +      +                                
Sbjct: 125 LPLI--KPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGV 182

Query: 176 ----------YSAAKAGVIGLTKTVAKEYASR----NINVNAIAPGFIASDMTAKLG 218
                     Y   K GV  L++  A++ + +     I +NA  PG++ +DM     
Sbjct: 183 HQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPKA 239

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score = 77.3 bits (191), Expect = 8e-17
 Identities = 50/264 (18%), Positives = 91/264 (34%), Gaps = 50/264 (18%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVS- 86
             V+TGA+ G+G   A  L + G  V++   R +++ E   + +           G V  
Sbjct: 18  TVVITGANSGLGAVTARELARRGATVIMA-VRDTRKGEAAARTM----------AGQVEV 66

Query: 87  KEADVESM--IKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDL----NLTGVF 140
           +E D++ +  ++   D     D+LINNAGI      M +  +   D  +     N  G F
Sbjct: 67  RELDLQDLSSVRRFADGVSGADVLINNAGI------MAVPYALTVDGFESQIGTNHLGHF 120

Query: 141 LCTQAAAKIMMKKKKGRIINIASVVGLVGNI-------GQANYSAAKAGVIGLTKTV--- 190
             T     +++ +   R++ ++S+    G I           YS   A     +K     
Sbjct: 121 ALTN----LLLPRLTDRVVTVSSMAHWPGRINLEDLNWRSRRYSPWLA--YSQSKLANLL 174

Query: 191 -AKEYASR------NINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGL 243
              E   R       +   A  PG+  +++    G  L   ++           +  A  
Sbjct: 175 FTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKLGDALMSAATRVVATDADFGARQ 234

Query: 244 VEFLALNPAAGYITGQVLTIDGGM 267
             + A     G      +    G 
Sbjct: 235 TLYAASQDLPG---DSFVGPRFGY 255

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 67.2 bits (164), Expect = 3e-13
 Identities = 31/183 (16%), Positives = 62/183 (33%), Gaps = 18/183 (9%)

Query: 8   AQVATIEQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEV 67
           A VA + +A      +V+   AVV   +  +G   A  L   G +V++   R   +A+  
Sbjct: 104 AGVALVVKAAG---GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLC-GRKLDKAQAA 159

Query: 68  CKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQ 127
              +       +T   + + +A     +K A         +     I     L  + ++ 
Sbjct: 160 ADSVNKRFKVNVT-AAETADDASRAEAVKGA-------HFVFTAGAI----GLELLPQAA 207

Query: 128 WQDVIDLNLTG-VFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGL 186
           WQ+   + +              +    KG+        G +G IG       +A +  L
Sbjct: 208 WQNESSIEIVADYNAQPPLGIGGIDATDKGKEYGGKRAFGALG-IGGLKLKLHRACIAKL 266

Query: 187 TKT 189
            ++
Sbjct: 267 FES 269

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score = 67.4 bits (165), Expect = 6e-13
 Identities = 35/162 (21%), Positives = 69/162 (42%), Gaps = 23/162 (14%)

Query: 30  VVTGASRGIGRAVATSL-GKAGCKVLVNYARS---SKEAEEVCKEIEASGGQALTFGGDV 85
           +VTG +  +G  VA  L  + G + LV  +R    +  A E+  ++ A G +      DV
Sbjct: 534 LVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDV 593

Query: 86  SKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVID------LNLTGV 139
           +    +  ++  ++     +  +++ AG+  D +   +   +   V+        NL   
Sbjct: 594 ADRETLAKVLA-SIPDEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLE- 651

Query: 140 FLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKA 181
            L     A ++           +SV G++G+ GQ NY+AA +
Sbjct: 652 -LIDPDVALVLF----------SSVSGVLGSGGQGNYAAANS 682

>4alk_A ENR, enoyl-[acyl-carrier-protein] reductase [NADPH]; oxidoreductase, short-chain dehydrogenase/reductase superfam fatty acid biosynthesis; HET: NAP E9P GLU; 1.90A {Staphylococcus aureus} PDB: 4alj_A* 4ali_A* 4alm_A 4aln_A 3gr6_A* 3gns_A* 3gnt_A 4all_A* Length = 282

 Score = 62.7 bits (153), Expect = 9e-12
 Identities = 65/260 (25%), Positives = 111/260 (42%), Gaps = 39/260 (15%)

Query: 29  AVVTG-AS-RGIGRAVATSLGKAGCKVLVNYA--RSSKEAEEVCKEIEASGGQALTFGGD 84
            V+ G A+ R I   VA  L + G K++  Y   RS KE E++ +++      A  +  D
Sbjct: 35  YVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPE--AHLYQID 92

Query: 85  VSKEADVESMIKTAVDAWGTVDILINNAG-------------ITRDTLLMRMKKSQWQDV 131
           V  + +V +  +      G +D + ++                +R+  L+    S +   
Sbjct: 93  VQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSY--- 149

Query: 132 IDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANY---SAAKAGVIGLTK 188
              +LT V      A K+M   + G I+   + +G  G     NY     AKA +    K
Sbjct: 150 ---SLTIV---AHEAKKLM--PEGGSIVAT-TYLG--GEFAVQNYNVMGVAKASLEANVK 198

Query: 189 TVAKEYASRNINVNAIAPGFIASDMTAKLG--EDLEKKILEKIPLGRYGQPEEVAGLVEF 246
            +A +    NI VNAI+ G I +     +G    + K+I E+ PL R     EV     +
Sbjct: 199 YLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIEERAPLKRNVDQVEVGKTAAY 258

Query: 247 LALNPAAGYITGQVLTIDGG 266
           L  + ++G +TG+ + +D G
Sbjct: 259 LLSDLSSG-VTGENIHVDSG 277

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} Length = 285

 Score = 62.3 bits (152), Expect = 1e-11
 Identities = 56/260 (21%), Positives = 106/260 (40%), Gaps = 40/260 (15%)

Query: 29  AVVTG-AS-RGIGRAVATSLGKAGCKVLVNYA--RSSKEAEEVCKEIEASGGQALTFGGD 84
           A++TG A+ R I   +A S  + G ++   YA  +  K   E+ K   +     L    D
Sbjct: 24  ALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSD----LVVKCD 79

Query: 85  VSKEADVESMIKTAVDAWGTVDILINNAG-------------ITRDTLLMRMKKSQWQDV 131
           VS + D++++ K   + WG++DI++++                +R+   + M  S +   
Sbjct: 80  VSLDEDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYS-- 137

Query: 132 IDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANY---SAAKAGVIGLTK 188
                    +        +M+ + G I+ + S  G        +Y     AKA +    +
Sbjct: 138 --------LIALTRELLPLMEGRNGAIVTL-SYYG--AEKVVPHYNVMGIAKAALESTVR 186

Query: 189 TVAKEYASRNINVNAIAPGFIASDMTAKLG--EDLEKKILEKIPLGRYGQPEEVAGLVEF 246
            +A + A     +NAI+ G + +     +     L +   +  P G+    E+V     F
Sbjct: 187 YLAYDIAKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPFGKPITIEDVGDTAVF 246

Query: 247 LALNPAAGYITGQVLTIDGG 266
           L  + A   ITG+V+ +D G
Sbjct: 247 LCSDWARA-ITGEVVHVDNG 265

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* Length = 266

 Score = 61.4 bits (150), Expect = 2e-11
 Identities = 69/263 (26%), Positives = 112/263 (42%), Gaps = 45/263 (17%)

Query: 29  AVVTG-AS-RGIGRAVATSLGKAGCKVLVNYA--RSSKEAEEVCKEIEASGGQALTFGGD 84
            VV G A+ R I   +A SL +AG +++  YA  R  K   E+   ++ +   ++    D
Sbjct: 10  IVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRND--SIILPCD 67

Query: 85  VSKEADVESMIKTAVDAWGTVDILINNAG-------------ITRDTLLMRMKKSQWQDV 131
           V+ +A++E+   +  +  G +  + +                  RD  L+    S +   
Sbjct: 68  VTNDAEIETCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSY--- 124

Query: 132 IDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLV---GNIGQANY---SAAKAGVIG 185
              +LT V    +AA  +M    +G      S+V L    G +   NY     AKA +  
Sbjct: 125 ---SLTAV---VKAARPMM---TEG-----GSIVTLTYLGGELVMPNYNVMGVAKASLDA 170

Query: 186 LTKTVAKEYASRNINVNAIAPGFIASDMTAKLG--EDLEKKILEKIPLGRYGQPEEVAGL 243
             K +A +    NI VN+I+ G I +     +     + K I E+ PL R   PEEV   
Sbjct: 171 SVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPLRRTTTPEEVGDT 230

Query: 244 VEFLALNPAAGYITGQVLTIDGG 266
             FL  + + G ITG+ L +D G
Sbjct: 231 AAFLFSDMSRG-ITGENLHVDSG 252

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 2jjy_A* Length = 280

 Score = 61.5 bits (150), Expect = 3e-11
 Identities = 48/260 (18%), Positives = 97/260 (37%), Gaps = 40/260 (15%)

Query: 29  AVVTG-AS-RGIGRAVATSLGKAGCKVLVNYA-RSSKEAEEVCKEIEASGGQALTFGGDV 85
            ++TG  S + I   +A ++ + G ++   Y  +     E++C E   +         DV
Sbjct: 29  ILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPA----AVLPCDV 84

Query: 86  SKEADVESMIKTAVDAWGTVDILINNAG--------------ITRDTLLMRMKKSQWQDV 131
             + +++ +       W  +D ++++                +TR+   +    S +   
Sbjct: 85  ISDQEIKDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYS-- 142

Query: 132 IDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANY---SAAKAGVIGLTK 188
                   F       + MMK +   ++ + + +G        +Y     AKA +    +
Sbjct: 143 --------FAALAKEGRSMMKNRNASMVAL-TYIG--AEKAMPSYNTMGVAKASLEATVR 191

Query: 189 TVAKEYASRNINVNAIAPGFIASDMTAKLG--EDLEKKILEKIPLGRYGQPEEVAGLVEF 246
             A       I VNA++ G I +   + +   + +        PL +     EV   V F
Sbjct: 192 YTALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPLKKNVDIMEVGNTVAF 251

Query: 247 LALNPAAGYITGQVLTIDGG 266
           L  + A G ITG+V+ +D G
Sbjct: 252 LCSDMATG-ITGEVVHVDAG 270

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* Length = 261

 Score = 60.7 bits (148), Expect = 4e-11
 Identities = 60/260 (23%), Positives = 117/260 (45%), Gaps = 41/260 (15%)

Query: 29  AVVTG-AS-RGIGRAVATSLGKAGCKVLVNYA--RSSKEAEEVCKEIEASGGQALTFGGD 84
           A+V G  + R +G A+A  L +AG +V ++Y   R   EAE++ + +  +    L F  D
Sbjct: 11  ALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGA----LLFRAD 66

Query: 85  VSKEADVESMIKTAVDAWGTVDILINNAG-------------ITRDTLLMRMKKSQWQDV 131
           V+++ +++++     +A+G +D L++                  R   L+ ++ S +   
Sbjct: 67  VTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAY--- 123

Query: 132 IDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANY---SAAKAGVIGLTK 188
              +L  V    + A  ++  ++ G I+ + +            Y   + AKA +    +
Sbjct: 124 ---SLVAV---ARRAEPLL--REGGGIVTL-TYYA--SEKVVPKYNVMAIAKAALEASVR 172

Query: 189 TVAKEYASRNINVNAIAPGFIASDMTAKLG--EDLEKKILEKIPLGRYGQPEEVAGLVEF 246
            +A E   + + VNAI+ G + +     +     +  ++ +  PL R    EEV  L  F
Sbjct: 173 YLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLF 232

Query: 247 LALNPAAGYITGQVLTIDGG 266
           L    A+G ITG+V+ +D G
Sbjct: 233 LLSPLASG-ITGEVVYVDAG 251

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} Length = 271

 Score = 60.7 bits (148), Expect = 4e-11
 Identities = 53/261 (20%), Positives = 105/261 (40%), Gaps = 42/261 (16%)

Query: 29  AVVTG-AS-RGIGRAVATSLGKAGCKVLVNYA--RSSKEAEEVCKEIEASGGQALTFGGD 84
            ++TG  S R I   +A +  + G ++   Y   R      E   E  +     L F  D
Sbjct: 17  ILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSE----LVFPCD 72

Query: 85  VSKEADVESMIKTAVDAWGTVDILINNAG--------------ITRDTLLMRMKKSQWQD 130
           V+ +A ++++  +    W ++D L+++ G              +TR+   +    S +  
Sbjct: 73  VADDAQIDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAY-- 130

Query: 131 VIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANY---SAAKAGVIGLT 187
               +   +    +AA  ++       ++ + S +G    I   NY     AKA +    
Sbjct: 131 ----SFPAL---AKAALPML--SDDASLLTL-SYLGAERAI--PNYNTMGLAKAALEASV 178

Query: 188 KTVAKEYASRNINVNAIAPGFIASDMTAKLG--EDLEKKILEKIPLGRYGQPEEVAGLVE 245
           + +A    ++ + VNAI+ G I +   + +     +   +    PL R    E+V     
Sbjct: 179 RYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPLKRNVTIEQVGNAGA 238

Query: 246 FLALNPAAGYITGQVLTIDGG 266
           FL  + A+G +T +V+ +D G
Sbjct: 239 FLLSDLASG-VTAEVMHVDSG 258

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* Length = 275

 Score = 60.7 bits (148), Expect = 5e-11
 Identities = 47/260 (18%), Positives = 102/260 (39%), Gaps = 41/260 (15%)

Query: 29  AVVTG-AS-RGIGRAVATSLGKAGCKVLVNYA--RSSKEAEEVCKEIEASGGQALTFGGD 84
            ++ G A+ + I   +A S    G  +   Y      K    + +E+ +       +  D
Sbjct: 9   GLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSP----YVYELD 64

Query: 85  VSKEADVESMIKTAVDAWGTVDILINNAG-------------ITRDTLLMRMKKSQWQDV 131
           VSKE   +S+  +     G++D ++++                ++      M+ S +   
Sbjct: 65  VSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVY--- 121

Query: 132 IDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANY---SAAKAGVIGLTK 188
              +L  +   T     ++       ++ + S +G    +  A+Y     AKA +    +
Sbjct: 122 ---SLIEL---TNTLKPLL--NNGASVLTL-SYLGSTKYM--AHYNVMGLAKAALESAVR 170

Query: 189 TVAKEYASRNINVNAIAPGFIASDMTAKLG--EDLEKKILEKIPLGRYGQPEEVAGLVEF 246
            +A +    +I VNA++ G I +  ++ +     + K      PL +    EEV     +
Sbjct: 171 YLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMY 230

Query: 247 LALNPAAGYITGQVLTIDGG 266
           L  + ++G ++G+V  +D G
Sbjct: 231 LLSSLSSG-VSGEVHFVDAG 249

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* Length = 293

 Score = 59.9 bits (146), Expect = 8e-11
 Identities = 59/260 (22%), Positives = 106/260 (40%), Gaps = 41/260 (15%)

Query: 29  AVVTG-AS-RGIGRAVATSLGKAGCKVLVNYA--RSSKEAEEVCKEIEASGGQALTFGGD 84
            ++ G A+ R I   +A +  +AG ++   Y      K  E + +E+ A     +    D
Sbjct: 34  GLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAF----VAGHCD 89

Query: 85  VSKEADVESMIKTAVDAWGTVDILINNAG-------------ITRDTLLMRMKKSQWQDV 131
           V+  A ++++ +T    WG +D L++  G              +       M  S +   
Sbjct: 90  VADAASIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVY--- 146

Query: 132 IDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANY---SAAKAGVIGLTK 188
              +LT V   ++ A K+M     G I+ + +  G    +   NY     AKA +    K
Sbjct: 147 ---SLTAV---SRRAEKLM--ADGGSILTL-TYYGAEKVM--PNYNVMGVAKAALEASVK 195

Query: 189 TVAKEYASRNINVNAIAPGFIASDMTAKLG--EDLEKKILEKIPLGRYGQPEEVAGLVEF 246
            +A +   +NI VNAI+ G I +   + +G    + K      PL R    +EV  +  +
Sbjct: 196 YLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIDEVGDVGLY 255

Query: 247 LALNPAAGYITGQVLTIDGG 266
              + +   +TG+V   D G
Sbjct: 256 FLSDLSRS-VTGEVHHADSG 274

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* Length = 296

 Score = 60.0 bits (146), Expect = 1e-10
 Identities = 51/260 (19%), Positives = 99/260 (38%), Gaps = 41/260 (15%)

Query: 29  AVVTG-AS-RGIGRAVATSLGKAGCKVLVNYA--RSSKEAEEVCKEIEASGGQALTFGGD 84
            V+ G A+ + +   +A ++   G +V + Y      K  + + + +       LT   D
Sbjct: 33  GVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVK----LTVPCD 88

Query: 85  VSKEADVESMIKTAVDAWGTVDILINNAG-------------ITRDTLLMRMKKSQWQDV 131
           VS    V++M K   + WG++D +++                 +    L  M  S +   
Sbjct: 89  VSDAESVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCY--- 145

Query: 132 IDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANY---SAAKAGVIGLTK 188
              + T +      A  +M     G I+ + S  G    +   +Y      KA +    K
Sbjct: 146 ---SFTYI---ASKAEPLM--TNGGSILTL-SYYGAEKVV--PHYNVMGVCKAALEASVK 194

Query: 189 TVAKEYASRNINVNAIAPGFIASDMTAKLG--EDLEKKILEKIPLGRYGQPEEVAGLVEF 246
            +A +   + I VNAI+ G + +  ++ +     +        PL R    ++V G   +
Sbjct: 195 YLAVDLGKQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPLRRNTTLDDVGGAALY 254

Query: 247 LALNPAAGYITGQVLTIDGG 266
           L  +   G  TG+ + +D G
Sbjct: 255 LLSDLGRG-TTGETVHVDCG 273

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* Length = 265

 Score = 59.5 bits (145), Expect = 1e-10
 Identities = 51/261 (19%), Positives = 102/261 (39%), Gaps = 42/261 (16%)

Query: 29  AVVTG-AS-RGIGRAVATSLGKAGCKVLVNYA--RSSKEAEEVCKEIEASGGQALTFGGD 84
            +VTG AS   I   +A ++ + G ++   Y   +     EE   ++ +     +    D
Sbjct: 12  ILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSD----IVLQCD 67

Query: 85  VSKEADVESMIKTAVDAWGTVDILINNAG--------------ITRDTLLMRMKKSQWQD 130
           V+++A +++M       W   D  +++ G              +TR+   +    S +  
Sbjct: 68  VAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSY-- 125

Query: 131 VIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANY---SAAKAGVIGLT 187
               +   +    +A   ++       ++ + S +G    I   NY     AKA +    
Sbjct: 126 ----SFVAM---AKACRSML--NPGSALLTL-SYLGAERAI--PNYNVMGLAKASLEANV 173

Query: 188 KTVAKEYASRNINVNAIAPGFIASDMTAKLG--EDLEKKILEKIPLGRYGQPEEVAGLVE 245
           + +A       + VNAI+ G I +   + +     +        P+ R    E+V     
Sbjct: 174 RYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAA 233

Query: 246 FLALNPAAGYITGQVLTIDGG 266
           FL  + +AG I+G+V+ +DGG
Sbjct: 234 FLCSDLSAG-ISGEVVHVDGG 253

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512

 Score = 58.4 bits (141), Expect = 7e-10
 Identities = 40/155 (25%), Positives = 59/155 (38%), Gaps = 6/155 (3%)

Query: 30   VVTGASRGIGRAVATSLGKAGCKVLVNYARS---SKEAEEVCKEIEASGGQALTFGGDVS 86
            V+TG   G G  +A  L   G + LV  +RS   +       +E    G Q L    + S
Sbjct: 1888 VITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNAS 1947

Query: 87   KEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
                  S+I       G V  + N A + RD +L       +QDV     +G     +  
Sbjct: 1948 SLDGARSLIT-EATQLGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVT 2006

Query: 147  AKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKA 181
             +     +    +  +SV    GN GQANY  A +
Sbjct: 2007 RE--ACPELDYFVIFSSVSCGRGNAGQANYGFANS 2039

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... Length = 269

 Score = 54.2 bits (131), Expect = 7e-09
 Identities = 46/275 (16%), Positives = 93/275 (33%), Gaps = 58/275 (21%)

Query: 29  AVVTG-AS-RGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVS 86
            +V+G  +   I   +A    + G ++++      +  + +   + A    A     DV 
Sbjct: 10  ILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAK---APLLELDVQ 66

Query: 87  KEADVESMIKTAVDAWGT---VDILINNAG--------------ITRDTLLMRMKKSQWQ 129
            E  + S+     +A G    +D ++++ G                   +   +  S + 
Sbjct: 67  NEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAY- 125

Query: 130 DVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLV--GNIGQANYS---AAKAGVI 184
                +   +    +A   IM     G      S+VG+    +     Y+    AK+ + 
Sbjct: 126 -----SYASM---AKALLPIM---NPG-----GSIVGMDFDPSRAMPAYNWMTVAKSALE 169

Query: 185 GLTKTVAKEYASRNINVNAIAPG------------FIASDMTAKLGEDLEKKILEKIPLG 232
            + + VA+E     +  N +A G                +      + LE+   ++ P+G
Sbjct: 170 SVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIG 229

Query: 233 R-YGQPEEVAGLVEFLALNPAAGYITGQVLTIDGG 266
                   VA  V  L L+      TG ++  DGG
Sbjct: 230 WNMKDATPVAKTVCAL-LSDWLPATTGDIIYADGG 263

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 53.3 bits (127), Expect = 3e-08
 Identities = 40/275 (14%), Positives = 76/275 (27%), Gaps = 95/275 (34%)

Query: 47  GKAGC-K-VLVNYARSSKEAEEVCKEIE---ASGGQA--LTFGGDVSKEADVESM----- 94
           G  G  K  +           +VC   +       +   L      S E  +E +     
Sbjct: 157 GVLGSGKTWVAL---------DVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLY 207

Query: 95  -----IKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQ-------DVIDLNLTGVFL- 141
                  +  D    + + I++    +  L   +K   ++       +V +      F  
Sbjct: 208 QIDPNWTSRSDHSSNIKLRIHSI---QAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNL 264

Query: 142 -CTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVI-------GLTKTVAKE 193
            C     KI++     R   +   +           SAA    I        LT    K 
Sbjct: 265 SC-----KILLTT---RFKQVTDFL-----------SAATTTHISLDHHSMTLTPDEVKS 305

Query: 194 YASRNINVNA---------IAP---GFIA---SDMTAKL-------GEDLEKKI---LEK 228
              + ++              P     IA    D  A          + L   I   L  
Sbjct: 306 LLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNV 365

Query: 229 IPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTI 263
           +      +P E   + + L++ P + +I   +L++
Sbjct: 366 L------EPAEYRKMFDRLSVFPPSAHIPTILLSL 394

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} Length = 422

 Score = 51.7 bits (123), Expect = 8e-08
 Identities = 48/306 (15%), Positives = 91/306 (29%), Gaps = 53/306 (17%)

Query: 13  IEQATNEAAQNVEAPVAVVTGASRGIGRAVATSL--GKAGCKVLVNYARSSKEAE----- 65
           I        +N      +V GAS G G A   +   G     + V + +    ++     
Sbjct: 48  IAATRARGVRNDGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAG 107

Query: 66  -----EVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG-TVDILINNA------- 112
                   K  +A+G  + +  GD   +A    +I+      G  VD+++ +        
Sbjct: 108 WYNSAAFDKHAKAAGLYSKSINGDAFSDAARAQVIELIKTEMGGQVDLVVYSLASPVRKL 167

Query: 113 ---GITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAK-------------------IM 150
              G  + + L  + ++     ID N   +   +   A                    I 
Sbjct: 168 PGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGGQDWELWID 227

Query: 151 MKKKKGRIINIASVVGL--VGN-IGQANY-----SAAKAGVIGLTKTVAKEYASRNINVN 202
             +  G + + A  V    +G  I    Y       AK  +    + +    A      N
Sbjct: 228 ALEGAGVLADGARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGAN 287

Query: 203 AIAPGFIASDMTAKL-GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL 261
                 + +  +A +    L   ++ KI +   G  E     ++ L          GQ  
Sbjct: 288 VAVLKSVVTQASAAIPVMPLYISMVYKI-MKEKGLHEGTIEQLDRL-FRERLYRQDGQPA 345

Query: 262 TIDGGM 267
            +D   
Sbjct: 346 EVDEQN 351

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* Length = 315

 Score = 49.4 bits (118), Expect = 3e-07
 Identities = 57/295 (19%), Positives = 98/295 (33%), Gaps = 72/295 (24%)

Query: 29  AVVTG-AS-RGIGRAVATSLGKAGCKVLVNY-----------------------ARSSKE 63
           A V G A   G G A+A  L  AG +V +                            S  
Sbjct: 12  AFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLI 71

Query: 64  AEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA--------WGTVDILINNAG-- 113
                  ++A+  +      D+        +    +           G +DIL+++    
Sbjct: 72  EFAGVYPLDAAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANG 131

Query: 114 ---------ITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASV 164
                     +R   L     S +      +   +    Q    IM   + G  + + S 
Sbjct: 132 PEVTKPLLETSRKGYLAASSNSAY------SFVSL---LQHFGPIM--NEGGSAVTL-SY 179

Query: 165 VGLVGNIGQANY----SAAKAGVIGLTKTVAKEYASR-NINVNAIAPGFI----ASDMTA 215
           +     +    Y    S+AKA +   T+T+A E   +  + VNAI+ G +    AS +  
Sbjct: 180 LAAERVV--PGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGK 237

Query: 216 KLGEDLEKKILEKI----PLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGG 266
              +      ++      PL R    ++V G   FL L+P A  ++G  L +D G
Sbjct: 238 SGEKSFIDYAIDYSYNNAPLRRDLHSDDVGGAALFL-LSPLARAVSGVTLYVDNG 291

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* Length = 297

 Score = 47.8 bits (114), Expect = 1e-06
 Identities = 60/289 (20%), Positives = 101/289 (34%), Gaps = 66/289 (22%)

Query: 29  AVVTG-AS-RGIGRAVATSLGKAGCKVLVNYA-----------------------RSSKE 63
           A + G A   G G AVA SL  AG ++LV                            S  
Sbjct: 11  AFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLM 70

Query: 64  AEEVCKEIEASGGQALTFGGDV--------SKEADVESMIKTAVDAWGTVDILINNAG-- 113
             +    ++A          DV        S    V+   +     +G++DIL+++    
Sbjct: 71  EIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANG 130

Query: 114 ---------ITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASV 164
                     +R   L  +  S +      +   +         IM     G  I++ + 
Sbjct: 131 PEVSKPLLETSRKGYLAAISASSY------SFVSL---LSHFLPIM--NPGGASISL-TY 178

Query: 165 VGLVGNIGQANY----SAAKAGVIGLTKTVAKEYASR-NINVNAIAPGFIASDMTAKLG- 218
           +     I    Y    S+AKA +   T+ +A E   + NI VN I+ G + S     +G 
Sbjct: 179 IASERII--PGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGF 236

Query: 219 -EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGG 266
            + + +      P+ +    +EV     FL ++P A  ITG  + +D G
Sbjct: 237 IDTMIEYSYNNAPIQKTLTADEVGNAAAFL-VSPLASAITGATIYVDNG 284

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} Length = 319

 Score = 46.4 bits (110), Expect = 4e-06
 Identities = 44/231 (19%), Positives = 83/231 (35%), Gaps = 47/231 (20%)

Query: 69  KEIEASGGQALTFGGDVSKEADVESMIKTAVDA--------WGTVDILINNAG------- 113
             ++A          +VS       +    +           G +DIL+++         
Sbjct: 90  YPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTK 149

Query: 114 ----ITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVG 169
                +R   L  +  S +      +   +    Q    +M  K+ G  + + S +    
Sbjct: 150 PLLQTSRKGYLAAVSSSSY------SFVSL---LQHFLPLM--KEGGSALAL-SYIASEK 197

Query: 170 NIGQANY----SAAKAGVIGLTKTVAKEY-ASRNINVNAIAPGFI----ASDMTAKLGED 220
            I    Y    S+AKA +    +T+A E   +R + VN I+ G +    AS +     + 
Sbjct: 198 VI--PGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKSRAASAIGKAGDKT 255

Query: 221 LEKKILEKI----PLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM 267
                ++      PL +  + ++V     FL L+P A  +TG  L +D G+
Sbjct: 256 FIDLAIDYSEANAPLQKELESDDVGRAALFL-LSPLARAVTGATLYVDNGL 305

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688

 Score = 45.6 bits (108), Expect = 1e-05
 Identities = 43/189 (22%), Positives = 65/189 (34%), Gaps = 54/189 (28%)

Query: 28  VAVVTGASRG-IGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEI---EASGGQALTFGG 83
             ++TGA +G IG  V   L + G KV+V  +R SK+  +  + I     + G  L    
Sbjct: 478 YVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIV-- 535

Query: 84  DV-----SKEADVESMI-------KTAVDAWGTVDILI-------NNAGIT----RDTLL 120
            V     SK+ DVE++I       K     W  +D +I           +     +    
Sbjct: 536 -VPFNQGSKQ-DVEALIEFIYDTEKNGGLGW-DLDAIIPFAAIPEQGIELEHIDSKSEFA 592

Query: 121 MRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVV-------GLVGNIGQ 173
            R           + LT +        K   K  +G     A V+       G  G  G 
Sbjct: 593 HR-----------IMLTNILRMMGCVKKQ--KSARGIETRPAQVILPMSPNHGTFGGDG- 638

Query: 174 ANYSAAKAG 182
             YS +K  
Sbjct: 639 -MYSESKLS 646

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* Length = 486

 Score = 44.7 bits (106), Expect = 2e-05
 Identities = 30/160 (18%), Positives = 56/160 (35%), Gaps = 20/160 (12%)

Query: 31  VTGASRGIGRAVATSLGKAGCKVLVNYARS---SKEAEEVCKEIEASGGQALTFGGDVSK 87
           VTG + G+G  +A  L + G   L+  +RS   +  A E+  E+EA G +      DV+ 
Sbjct: 231 VTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTD 290

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVID------LNLTGVFL 141
              V  ++   +     +  + + A    D  +  +   + +           NL  +  
Sbjct: 291 RESVRELL-GGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTR 349

Query: 142 CTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKA 181
                A ++           +S     G  G   Y+   A
Sbjct: 350 ELDLTAFVL----------FSSFASAFGAPGLGGYAPGNA 379

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} Length = 525

 Score = 44.4 bits (105), Expect = 2e-05
 Identities = 26/166 (15%), Positives = 46/166 (27%), Gaps = 16/166 (9%)

Query: 31  VTGASRGIGRAVATSLGKAGCKVLV--------------NYARSSKEAEEVCKEIEASGG 76
           VTGA        A  L + G   L+              + A        +  E+   G 
Sbjct: 256 VTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGA 315

Query: 77  QALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNL 136
            A     D++       ++   V     +  +++         L          V+    
Sbjct: 316 TATVVTCDLTDAEAAARLL-AGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKA 374

Query: 137 TGVF-LCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKA 181
           T    L            +   ++  +SV  + G  GQ  Y+A  A
Sbjct: 375 TAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWGGAGQGAYAAGTA 420

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* Length = 405

 Score = 42.4 bits (99), Expect = 8e-05
 Identities = 24/113 (21%), Positives = 37/113 (32%), Gaps = 12/113 (10%)

Query: 13  IEQATNEAAQNVEAPVAVVTGASRGIGRA--VATSLGKAGCKVLVNYARSSKE------- 63
           I+  T E          +V GAS G G A  +  + G     + V + R  +E       
Sbjct: 34  IDYVTTEGPIANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSG 93

Query: 64  ---AEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAG 113
              +    K     G  A +  GD   +   +  I       G VD +I +  
Sbjct: 94  WYNSAAFHKFAAQKGLYAKSINGDAFSDEIKQLTIDAIKQDLGQVDQVIYSLA 146

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* Length = 496

 Score = 40.1 bits (94), Expect = 5e-04
 Identities = 35/172 (20%), Positives = 63/172 (36%), Gaps = 39/172 (22%)

Query: 29  AVVTGASRGIGRAVATSLGKAGCKVLVNYARS---SKEAEEVCKEIEASGGQALTFGGDV 85
            +VTG + GIG  VA  L + G   LV  +R    +  A E+  E+E  G +      D 
Sbjct: 242 VLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDA 301

Query: 86  SKEADVESMIKTAVDAWGTVDILINNAGITRD-TLLMRMKKSQWQDVI------------ 132
           +    + +++   +     +  + ++AG+  D   +  +   Q   ++            
Sbjct: 302 ADREALAALL-AELPEDAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHE 360

Query: 133 ---DLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKA 181
              DL+L    L                    +S   + G+ GQ  Y+AA A
Sbjct: 361 LTADLDLDAFVLF-------------------SSGAAVWGSGGQPGYAAANA 393

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} Length = 511

 Score = 40.2 bits (94), Expect = 5e-04
 Identities = 41/158 (25%), Positives = 67/158 (42%), Gaps = 19/158 (12%)

Query: 31  VTGASRGIGRAVATSLGKAGCKVLVNYARS---SKEAEEVCKEIEASGGQALTFGGDVSK 87
           +TG    IGR +A  L   G + LV  +R    +  A E+ +E+   G + +    DV++
Sbjct: 264 ITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAE 323

Query: 88  EADVESMIK----TAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCT 143
              + +++      AV          + AGI  D ++  +    ++ V    + G  L  
Sbjct: 324 RDALAALVTAYPPNAV---------FHTAGILDDAVIDTLSPESFETVRGAKVCGAELLH 374

Query: 144 QAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKA 181
           Q  A I   K     +  +SV G  GN GQ  Y+AA A
Sbjct: 375 QLTADI---KGLDAFVLFSSVTGTWGNAGQGAYAAANA 409

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	269
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	100.0
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	100.0
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	100.0
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	100.0
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	100.0
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	100.0
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	100.0
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	100.0
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	100.0
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	100.0
3rih_A	293	Short chain dehydrogenase or reductase; structural	100.0
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	100.0
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	100.0
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	100.0
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	100.0
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	100.0
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	100.0
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	100.0
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	100.0
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	100.0
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	100.0
3imf_A	257	Short chain dehydrogenase; structural genomics, in	100.0
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	100.0
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	100.0
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	100.0
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	100.0
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	100.0
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	100.0
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	100.0
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	100.0
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	100.0
4dqx_A	277	Probable oxidoreductase protein; structural genomi	100.0
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	100.0
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	100.0
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	100.0
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	100.0
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	100.0
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	100.0
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	100.0
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	100.0
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	100.0
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	100.0
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	100.0
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	100.0
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	100.0
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	100.0
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	100.0
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	100.0
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	100.0
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	100.0
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	100.0
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	100.0
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	100.0
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	100.0
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	100.0
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	100.0
3cxt_A	291	Dehydrogenase with different specificities; rossma	100.0
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	100.0
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	100.0
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	100.0
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	100.0
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	100.0
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	100.0
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	100.0
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	100.0
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	100.0
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	100.0
1xhl_A	297	Short-chain dehydrogenase/reductase family member	100.0
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	100.0
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	100.0
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	100.0
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	100.0
1xkq_A	280	Short-chain reductase family member (5D234); parra	100.0
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	100.0
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	100.0
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	100.0
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	100.0
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	100.0
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	100.0
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	100.0
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	100.0
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	100.0
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	100.0
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	100.0
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	100.0
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	100.0
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	100.0
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	100.0
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	100.0
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	100.0
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	100.0
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	100.0
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	100.0
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	100.0
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	100.0
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	100.0
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	100.0
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	100.0
1spx_A	278	Short-chain reductase family member (5L265); paral	100.0
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	100.0
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	100.0
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	100.0
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	100.0
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	100.0
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	100.0
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	100.0
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	100.0
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	100.0
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	100.0
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	100.0
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	100.0
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	100.0
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	100.0
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	100.0
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	100.0
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	100.0
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	100.0
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	100.0
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	100.0
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	100.0
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	100.0
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	100.0
1xq1_A	266	Putative tropinone reducatse; structural genomics,	100.0
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	100.0
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	100.0
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	100.0
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	100.0
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	100.0
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	100.0
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	100.0
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	100.0
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	100.0
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	100.0
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	100.0
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	100.0
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	100.0
4e4y_A	244	Short chain dehydrogenase family protein; structur	100.0
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	100.0
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	100.0
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	100.0
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	100.0
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	100.0
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	100.0
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	100.0
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	100.0
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	100.0
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	100.0
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	100.0
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	100.0
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	100.0
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	100.0
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	100.0
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	100.0
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	100.0
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	100.0
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	100.0
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	100.0
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	100.0
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	100.0
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	100.0
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	100.0
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	100.0
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	100.0
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	100.0
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	100.0
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	100.0
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	100.0
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	100.0
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	100.0
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	100.0
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	100.0
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	100.0
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	100.0
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	100.0
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	100.0
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	100.0
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	100.0
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	100.0
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	100.0
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	100.0
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	100.0
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	100.0
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	100.0
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	100.0
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	100.0
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	100.0
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	100.0
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	100.0
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	100.0
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	100.0
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	100.0
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.97
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.97
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.97
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.96
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.96
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.95
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.94
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.94
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.94
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.93
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.93
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.93
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.93
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.93
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.92
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.92
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.92
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.92
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.92
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.92
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.92
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.91
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.91
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.91
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.91
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.91
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.91
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.91
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.91
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.91
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.91
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.91
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.91
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.91
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.9
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.9
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.9
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.9
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.9
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.9
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.9
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.89
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.89
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.89
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.89
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.89
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.89
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.89
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.88
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.88
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.88
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.88
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.88
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.88
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.88
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.88
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.87
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.87
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.87
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.87
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.87
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.86
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.86
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.86
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.86
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.86
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.85
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.85
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.85
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.85
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.84
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.84
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.84
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.84
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.83
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.83
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.83
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.82
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.82
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.8
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.79
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.77
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.76
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.75
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.74
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.72
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.72
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.71
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.69
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.68
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.66
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.65
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.63
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.62
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.6
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.47
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.32
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.14
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	99.06
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.89
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.85
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	98.77
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.72
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	98.65
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.57
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.56
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.48
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.48
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.48
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.46
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.42
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.41
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.36
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.36
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.27
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.25
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.23
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.22
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.21
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	98.21
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.18
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	98.14
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.14
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.12
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.12
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	98.09
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.08
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	98.04
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	98.01
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.99
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	97.98
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.97
1id1_A	153	Putative potassium channel protein; RCK domain, E.	97.97
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.94
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.9
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.89
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	97.88
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.86
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	97.85
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	97.83
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	97.82
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	97.8
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.79
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.79
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.74
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.69
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.67
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.64
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.62
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.6
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.6
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.58
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.57
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.57
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.55
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.54
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.53
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.52
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	97.48
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.47
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.43
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.42
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.42
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	97.39
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.37
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.37
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.36
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	97.3
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.29
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	97.26
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.23
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	97.21
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.19
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.16
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.14
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	97.13
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	97.09
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	97.05
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	97.03
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.02
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	97.02
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	97.02
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	97.01
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	97.0
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	96.98
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	96.98
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	96.96
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.95
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	96.94
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	96.92
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	96.92
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	96.9
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	96.88
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	96.86
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	96.85
3tl2_A	315	Malate dehydrogenase; center for structural genomi	96.85
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	96.82
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	96.72
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	96.69
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	96.68
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	96.67
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	96.64
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	96.64
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	96.56
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.55
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	96.54
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	96.53
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	96.48
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	96.47
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	96.46
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	96.43
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	96.43
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	96.41
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	96.31
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	96.31
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	96.27
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	96.25
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	96.25
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	96.24
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	96.22
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	96.17
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	96.17
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	96.15
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	96.15
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	96.14
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	96.13
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	96.13
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	96.13
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	96.13
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	96.03
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	96.01
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	96.0
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	95.95
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	95.95
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	95.88
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	95.83
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	95.83
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	95.82
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	95.8
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	95.67
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	95.67
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	95.63
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	95.62
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	95.6
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	95.6
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	95.59
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	95.58
3vh1_A	598	Ubiquitin-like modifier-activating enzyme ATG7; au	95.57
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	95.37
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	95.28
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	95.27
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	95.26
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	95.25
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	95.25
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	95.23
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	95.22
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	95.22
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	95.2
3qha_A	296	Putative oxidoreductase; seattle structural genomi	95.17
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	95.09
1lnq_A	336	MTHK channels, potassium channel related protein;	95.06
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	95.05
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	94.99
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	94.98
3k96_A	356	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA	94.98
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	94.92
3l07_A	285	Bifunctional protein fold; structural genomics, ID	94.91
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	94.91
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	94.9
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	94.87
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	94.83
1pjz_A	203	Thiopurine S-methyltransferase; polymorphism, S-ad	94.77
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	94.75
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	94.73
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	94.69
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	94.69
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	94.68
3aoe_E	419	Glutamate dehydrogenase; rossmann fold, NADH, oxid	94.66
3mog_A	483	Probable 3-hydroxybutyryl-COA dehydrogenase; struc	94.66
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	94.61
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	94.6

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=1.3e-59  Score=391.60  Aligned_cols=247  Identities=31%  Similarity=0.543  Sum_probs=227.7

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      .++|+||++|||||++|||+++|+.|+++|++|++ ++|+++.++++.+++++.+.++.++++|++|+++++++++++.+
T Consensus         2 y~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~-~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   80 (254)
T 4fn4_A            2 YQSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVA-VELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFE   80 (254)
T ss_dssp             CGGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEE-EECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            36899999999999999999999999999999988 68999999999999999889999999999999999999999999


Q ss_pred             hcCCccEEEEccCCCC-CCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHh
Q 024338          101 AWGTVDILINNAGITR-DTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAA  179 (269)
Q Consensus       101 ~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  179 (269)
                      +||+||+||||||+.. ..++.+.+.++|++.+++|+.++++++|+++|+|++++.|+|||+||..+..+.++...|++|
T Consensus        81 ~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~~~~~Y~as  160 (254)
T 4fn4_A           81 TYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVA  160 (254)
T ss_dssp             HHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSSSCHHHHHH
T ss_pred             HcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCCCChHHHHH
Confidence            9999999999999865 467999999999999999999999999999999999899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC---hHHHH-HHHhcCCCCCCCCHHHHHHHHHHhccCCCCCC
Q 024338          180 KAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG---EDLEK-KILEKIPLGRYGQPEEVAGLVEFLALNPAAGY  255 (269)
Q Consensus       180 K~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~  255 (269)
                      |+++.+|++++|.|++++|||||+|+||+++||+.....   +...+ ......|++++..|+|+|++++||+ +++++|
T Consensus       161 Kaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~R~g~pediA~~v~fLa-Sd~a~~  239 (254)
T 4fn4_A          161 KHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVIVFLA-SDEASF  239 (254)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHTTCCCCBCHHHHHHHHHHHH-SGGGTT
T ss_pred             HHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHh-CchhcC
Confidence            999999999999999999999999999999999865432   22222 2334568899999999999999999 678899


Q ss_pred             ccccEEEecCCccC
Q 024338          256 ITGQVLTIDGGMVM  269 (269)
Q Consensus       256 ~~G~~i~~dgg~~~  269 (269)
                      +|||+|.||||+++
T Consensus       240 iTG~~i~VDGG~t~  253 (254)
T 4fn4_A          240 VNGDAVVVDGGLTV  253 (254)
T ss_dssp             CCSCEEEESTTGGG
T ss_pred             CcCCEEEeCCCccc
Confidence            99999999999975

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=3e-59  Score=389.51  Aligned_cols=245  Identities=36%  Similarity=0.554  Sum_probs=231.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      .+|+||++|||||++|||+++|+.|+++|++|++ .+|+++.+++..+++++.+.++..+.+|++|+++++++++++.++
T Consensus         5 f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi-~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (255)
T 4g81_D            5 FDLTGKTALVTGSARGLGFAYAEGLAAAGARVIL-NDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAE   83 (255)
T ss_dssp             TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEE-CCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999988 689999999999999988889999999999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-CCCCeEEEEcCCccccCCCCChhhHHhH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMK-KKKGRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                      +|+||+||||||+....++.+.+.++|++.+++|+.++++++|+++|+|.+ +++|+|||+||..+..+.|+...|++||
T Consensus        84 ~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~~~~Y~asK  163 (255)
T 4g81_D           84 GIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAK  163 (255)
T ss_dssp             TCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTTCHHHHHHH
T ss_pred             CCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCCchhHHHHH
Confidence            999999999999998899999999999999999999999999999999965 4679999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc--ChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccc
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL--GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITG  258 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G  258 (269)
                      +++.+|++++|.|++++|||||+|+||+++||+....  .++..+...+..|++++.+|+|+|++++||+ +++++|+||
T Consensus       164 aal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~-S~~a~~iTG  242 (255)
T 4g81_D          164 GGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQRWGRPEELIGTAIFLS-SKASDYING  242 (255)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCHHHHHHHHHHSTTCSCBCGGGGHHHHHHHH-SGGGTTCCS
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHh-CchhCCCcC
Confidence            9999999999999999999999999999999987653  3445566778899999999999999999999 678899999


Q ss_pred             cEEEecCCcc
Q 024338          259 QVLTIDGGMV  268 (269)
Q Consensus       259 ~~i~~dgg~~  268 (269)
                      |+|.|||||+
T Consensus       243 ~~i~VDGG~~  252 (255)
T 4g81_D          243 QIIYVDGGWL  252 (255)
T ss_dssp             CEEEESTTGG
T ss_pred             CEEEECCCeE
Confidence            9999999986

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=1.3e-57  Score=382.98  Aligned_cols=249  Identities=27%  Similarity=0.447  Sum_probs=218.5

Q ss_pred             hhhcccccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHH
Q 024338           14 EQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVES   93 (269)
Q Consensus        14 ~~~~~~~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~   93 (269)
                      +.+.+.|+.+|+||++|||||++|||+++|+.|+++|++|++ .+|+.+.+++..+++   +.+...+++|++|++++++
T Consensus        17 n~~~~~Ms~rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i-~~r~~~~l~~~~~~~---g~~~~~~~~Dv~~~~~v~~   92 (273)
T 4fgs_A           17 NLYFQSMTQRLNAKIAVITGATSGIGLAAAKRFVAEGARVFI-TGRRKDVLDAAIAEI---GGGAVGIQADSANLAELDR   92 (273)
T ss_dssp             --------CTTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHH---CTTCEEEECCTTCHHHHHH
T ss_pred             ccchhhhcchhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHc---CCCeEEEEecCCCHHHHHH
Confidence            334455667899999999999999999999999999999988 589998888877766   5678889999999999999


Q ss_pred             HHHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCC
Q 024338           94 MIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQ  173 (269)
Q Consensus        94 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~  173 (269)
                      +++++.++||+||+||||||+....++.+.+.++|++.+++|+.++++++|+++|+|+  +.|+||++||..+..+.|+.
T Consensus        93 ~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~--~~G~IInisS~~~~~~~~~~  170 (273)
T 4fgs_A           93 LYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLA--RGSSVVLTGSTAGSTGTPAF  170 (273)
T ss_dssp             HHHHHHHHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEE--EEEEEEEECCGGGGSCCTTC
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHh--hCCeEEEEeehhhccCCCCc
Confidence            9999999999999999999998889999999999999999999999999999999994  46899999999999999999


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC-------hHHHHHHHhcCCCCCCCCHHHHHHHHHH
Q 024338          174 ANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG-------EDLEKKILEKIPLGRYGQPEEVAGLVEF  246 (269)
Q Consensus       174 ~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~a~~~~~  246 (269)
                      ..|++||+|+.+|++++|.|++++|||||+|+||+++||+.....       +...+.+....|++|+.+|+|+|++++|
T Consensus       171 ~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~F  250 (273)
T 4fgs_A          171 SVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEEVAAAALF  250 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            999999999999999999999999999999999999999865542       1234556778999999999999999999


Q ss_pred             hccCCCCCCccccEEEecCCccC
Q 024338          247 LALNPAAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       247 l~~~~~~~~~~G~~i~~dgg~~~  269 (269)
                      |+ +++++|+|||+|.||||+++
T Consensus       251 La-Sd~a~~iTG~~i~VDGG~s~  272 (273)
T 4fgs_A          251 LA-SDDSSFVTGAELFVDGGSAQ  272 (273)
T ss_dssp             HH-SGGGTTCCSCEEEESTTTTT
T ss_pred             Hh-CchhcCccCCeEeECcChhh
Confidence            99 67889999999999999864

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=2.9e-56  Score=372.88  Aligned_cols=243  Identities=25%  Similarity=0.413  Sum_probs=215.2

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      .++|+||++|||||++|||+++|+.|+++|++|+++ +|+.+..+ ..+++.+.+.+..++.+|++|+++++++++++.+
T Consensus         2 ~~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~-~r~~~~~~-~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~   79 (258)
T 4gkb_A            2 DLNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVF-ARHAPDGA-FLDALAQRQPRATYLPVELQDDAQCRDAVAQTIA   79 (258)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ESSCCCHH-HHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEE-ECCcccHH-HHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999985 66655443 4456666678899999999999999999999999


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhH
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                      +||+||+||||||+....+ .+.+.++|++.+++|+.+++.++|+++|+|+++ +|+|||+||+.+..+.|+...|++||
T Consensus        80 ~~G~iDiLVNnAGi~~~~~-~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-~G~IVnisS~~~~~~~~~~~~Y~asK  157 (258)
T 4gkb_A           80 TFGRLDGLVNNAGVNDGIG-LDAGRDAFVASLERNLIHYYAMAHYCVPHLKAT-RGAIVNISSKTAVTGQGNTSGYCASK  157 (258)
T ss_dssp             HHSCCCEEEECCCCCCCCC-TTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCTHHHHCCSSCHHHHHHH
T ss_pred             HhCCCCEEEECCCCCCCCC-ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCeEEEEeehhhccCCCCchHHHHHH
Confidence            9999999999999865444 478999999999999999999999999999654 59999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC------hHHHHHHHhcCCCC-CCCCHHHHHHHHHHhccCCCC
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG------EDLEKKILEKIPLG-RYGQPEEVAGLVEFLALNPAA  253 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~------~~~~~~~~~~~~~~-~~~~~~~~a~~~~~l~~~~~~  253 (269)
                      +++.+|++++|.|++++|||||+|+||+++||+.+...      +...+......|++ ++.+|+|+|++++||+ ++++
T Consensus       158 aav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg~R~g~peeiA~~v~fLa-S~~a  236 (258)
T 4gkb_A          158 GAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTPDEIADTAVFLL-SPRA  236 (258)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTTTTSCBCHHHHHHHHHHHH-SGGG
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHh-Cchh
Confidence            99999999999999999999999999999999876542      23445667778885 8999999999999999 6788


Q ss_pred             CCccccEEEecCCcc
Q 024338          254 GYITGQVLTIDGGMV  268 (269)
Q Consensus       254 ~~~~G~~i~~dgg~~  268 (269)
                      +|+|||+|.|||||+
T Consensus       237 ~~iTG~~i~VDGG~T  251 (258)
T 4gkb_A          237 SHTTGEWLFVDGGYT  251 (258)
T ss_dssp             TTCCSCEEEESTTTT
T ss_pred             cCccCCeEEECCCcc
Confidence            999999999999996

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=1.1e-56  Score=370.77  Aligned_cols=238  Identities=41%  Similarity=0.676  Sum_probs=216.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      .+|+||++|||||++|||+++|+.|+++|++|++. +|+.+  ++..+++++.+.+...+.+|++|+++++++++     
T Consensus         5 f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~-~r~~~--~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~-----   76 (247)
T 4hp8_A            5 FSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCA-ARRAP--DETLDIIAKDGGNASALLIDFADPLAAKDSFT-----   76 (247)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEE-ESSCC--HHHHHHHHHTTCCEEEEECCTTSTTTTTTSST-----
T ss_pred             cCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEE-eCCcH--HHHHHHHHHhCCcEEEEEccCCCHHHHHHHHH-----
Confidence            57999999999999999999999999999999985 55543  34566777778899999999999998887764     


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCCeEEEEcCCccccCCCCChhhHHhH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKK-KKGRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                      +++||+||||||+....++.+.+.++|++.+++|+.++|+++|+++|.|.++ +.|+|||+||..+..+.++...|++||
T Consensus        77 ~g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~~~~Y~asK  156 (247)
T 4hp8_A           77 DAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTAAK  156 (247)
T ss_dssp             TTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSSCHHHHHHH
T ss_pred             hCCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCCChHHHHHH
Confidence            4799999999999988999999999999999999999999999999999766 479999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc--ChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccc
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL--GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITG  258 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G  258 (269)
                      +++.+|++++|.|++++|||||+|+||+++||+....  .+...+...+.+|++++.+|+|+|++++||+ +++++|+||
T Consensus       157 aav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~fLa-Sd~a~~iTG  235 (247)
T 4hp8_A          157 HGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAILERIPAGRWGHSEDIAGAAVFLS-SAAADYVHG  235 (247)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCTTSSCBCTHHHHHHHHHHT-SGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHh-CchhcCCcC
Confidence            9999999999999999999999999999999987654  2344566778899999999999999999999 678999999


Q ss_pred             cEEEecCCcc
Q 024338          259 QVLTIDGGMV  268 (269)
Q Consensus       259 ~~i~~dgg~~  268 (269)
                      |+|.|||||+
T Consensus       236 ~~i~VDGG~~  245 (247)
T 4hp8_A          236 AILNVDGGWL  245 (247)
T ss_dssp             CEEEESTTGG
T ss_pred             CeEEECcccc
Confidence            9999999997

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=5.9e-55  Score=359.82  Aligned_cols=231  Identities=32%  Similarity=0.556  Sum_probs=204.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      ++||++|||||++|||+++|+.|+++|++|+++ +|+.+.+++      ..+.++..+.+|++|+++++++++    +++
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~-~~~~~~~~~------~~~~~~~~~~~Dv~~~~~v~~~~~----~~g   77 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVAL-GLDADGVHA------PRHPRIRREELDITDSQRLQRLFE----ALP   77 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ESSTTSTTS------CCCTTEEEEECCTTCHHHHHHHHH----HCS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEE-eCCHHHHhh------hhcCCeEEEEecCCCHHHHHHHHH----hcC
Confidence            589999999999999999999999999999984 777654432      224678899999999999887764    579


Q ss_pred             CccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHH
Q 024338          104 TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGV  183 (269)
Q Consensus       104 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al  183 (269)
                      +||+||||||+.  .++.+.+.++|++.+++|+.++++++|+++|+|++ ++|+|||+||+.+..+.++...|++||+++
T Consensus        78 ~iDiLVNNAGi~--~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~-~~G~IVnisS~~~~~~~~~~~~Y~asKaav  154 (242)
T 4b79_A           78 RLDVLVNNAGIS--RDREEYDLATFERVLRLNLSAAMLASQLARPLLAQ-RGGSILNIASMYSTFGSADRPAYSASKGAI  154 (242)
T ss_dssp             CCSEEEECCCCC--CGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HCEEEEEECCGGGTSCCSSCHHHHHHHHHH
T ss_pred             CCCEEEECCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH-cCCeEEEEeeccccCCCCCCHHHHHHHHHH
Confidence            999999999975  46778999999999999999999999999999965 469999999999999999999999999999


Q ss_pred             HHHHHHHHHHhccCCeEEEEEecCCccCCcccccC--hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEE
Q 024338          184 IGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG--EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL  261 (269)
Q Consensus       184 ~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i  261 (269)
                      .+|++++|.|++++|||||+|+||+++||+.....  ++..+...+..|++++.+|+|+|++++||+ +++++|+|||+|
T Consensus       155 ~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~fLa-Sd~a~~iTG~~l  233 (242)
T 4b79_A          155 VQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLARWGEAPEVASAAAFLC-GPGASFVTGAVL  233 (242)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHT-SGGGTTCCSCEE
T ss_pred             HHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh-CchhcCccCceE
Confidence            99999999999999999999999999999876543  355677788999999999999999999999 678899999999


Q ss_pred             EecCCccC
Q 024338          262 TIDGGMVM  269 (269)
Q Consensus       262 ~~dgg~~~  269 (269)
                      .|||||+.
T Consensus       234 ~VDGG~la  241 (242)
T 4b79_A          234 AVDGGYLC  241 (242)
T ss_dssp             EESTTGGG
T ss_pred             EECccHhh
Confidence            99999973

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=6e-54  Score=355.96  Aligned_cols=229  Identities=28%  Similarity=0.499  Sum_probs=208.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTV  105 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i  105 (269)
                      +|++|||||++|||+++|+.|+++|++|++ .+|+++.++++.+    ...+...+++|++|+++++++++++.++||+|
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~-~~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~i   76 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCF-IDIDEKRSADFAK----ERPNLFYFHGDVADPLTLKKFVEYAMEKLQRI   76 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHT----TCTTEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHH----hcCCEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            599999999999999999999999999988 5788776655443    35678899999999999999999999999999


Q ss_pred             cEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHHHH
Q 024338          106 DILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIG  185 (269)
Q Consensus       106 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~  185 (269)
                      |+||||||+....++.+.+.++|++.+++|+.+++.++|+++|.|.++ +|+||++||..+..+.|+...|++||+++.+
T Consensus        77 DiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~-~G~IInisS~~~~~~~~~~~~Y~asKaal~~  155 (247)
T 3ged_A           77 DVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKN-KGRIINIASTRAFQSEPDSEAYASAKGGIVA  155 (247)
T ss_dssp             CEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCcEEEEeecccccCCCCCHHHHHHHHHHHH
Confidence            999999999888999999999999999999999999999999999765 5999999999999999999999999999999


Q ss_pred             HHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEEEecC
Q 024338          186 LTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDG  265 (269)
Q Consensus       186 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dg  265 (269)
                      |++++|.|+++ |||||+|+||+++|++.....+    .....+|++++.+|+|+|++++||+++   +|+|||+|.|||
T Consensus       156 ltk~lA~ela~-~IrVN~I~PG~i~t~~~~~~~~----~~~~~~Pl~R~g~pediA~~v~fL~s~---~~iTG~~i~VDG  227 (247)
T 3ged_A          156 LTHALAMSLGP-DVLVNCIAPGWINVTEQQEFTQ----EDCAAIPAGKVGTPKDISNMVLFLCQQ---DFITGETIIVDG  227 (247)
T ss_dssp             HHHHHHHHHTT-TSEEEEEEECSBCCCC---CCH----HHHHTSTTSSCBCHHHHHHHHHHHHHC---SSCCSCEEEEST
T ss_pred             HHHHHHHHHCC-CCEEEEEecCcCCCCCcHHHHH----HHHhcCCCCCCcCHHHHHHHHHHHHhC---CCCCCCeEEECc
Confidence            99999999998 9999999999999998665543    345678999999999999999999953   599999999999


Q ss_pred             Ccc
Q 024338          266 GMV  268 (269)
Q Consensus       266 g~~  268 (269)
                      |++
T Consensus       228 G~s  230 (247)
T 3ged_A          228 GMS  230 (247)
T ss_dssp             TGG
T ss_pred             CHH
Confidence            986

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=100.00  E-value=5.9e-54  Score=360.25  Aligned_cols=244  Identities=22%  Similarity=0.275  Sum_probs=222.3

Q ss_pred             cCCCCCCEEEEeCCCC--chHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcC-CcEEEEEccCCCHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASR--GIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASG-GQALTFGGDVSKEADVESMIKT   97 (269)
Q Consensus        21 ~~~~~~k~vlItGas~--giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dls~~~~~~~~~~~   97 (269)
                      |++|+||++|||||+|  |||+++|+.|+++|++|++ .+|+++.++++.+++.+.+ .+..++++|++|++++++++++
T Consensus         1 M~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi-~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   79 (256)
T 4fs3_A            1 MLNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVF-TYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQ   79 (256)
T ss_dssp             CCCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEE-EESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHH
Confidence            5789999999999875  9999999999999999988 5888888888888887654 4788999999999999999999


Q ss_pred             HHHhcCCccEEEEccCCCCC----CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCC
Q 024338           98 AVDAWGTVDILINNAGITRD----TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQ  173 (269)
Q Consensus        98 ~~~~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~  173 (269)
                      +.+++|++|+||||||+...    .++.+.+.++|...+++|+.+++.+.+.+.|++  +++|+||++||..+..+.|+.
T Consensus        80 ~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~--~~~G~IVnisS~~~~~~~~~~  157 (256)
T 4fs3_A           80 IGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLM--PEGGSIVATTYLGGEFAVQNY  157 (256)
T ss_dssp             HHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTC--TTCEEEEEEECGGGTSCCTTT
T ss_pred             HHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHh--ccCCEEEEEeccccccCcccc
Confidence            99999999999999998643    456788999999999999999999999998876  457999999999999999999


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC--hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCC
Q 024338          174 ANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG--EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNP  251 (269)
Q Consensus       174 ~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~  251 (269)
                      ..|++||+|+.+|+++|+.|++++|||||+|+||+++|++.+...  ++..+...+..|++++.+|+|+|++++||+ ++
T Consensus       158 ~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~peevA~~v~fL~-Sd  236 (256)
T 4fs3_A          158 NVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPLKRNVDQVEVGKTAAYLL-SD  236 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHH-SG
T ss_pred             hhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh-Cc
Confidence            999999999999999999999999999999999999999887654  445667788899999999999999999999 67


Q ss_pred             CCCCccccEEEecCCcc
Q 024338          252 AAGYITGQVLTIDGGMV  268 (269)
Q Consensus       252 ~~~~~~G~~i~~dgg~~  268 (269)
                      +++|+|||+|.|||||+
T Consensus       237 ~a~~iTG~~i~VDGG~~  253 (256)
T 4fs3_A          237 LSSGVTGENIHVDSGFH  253 (256)
T ss_dssp             GGTTCCSCEEEESTTGG
T ss_pred             hhcCccCCEEEECcCHH
Confidence            88999999999999986

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=100.00  E-value=4.6e-54  Score=360.58  Aligned_cols=235  Identities=27%  Similarity=0.445  Sum_probs=208.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      ++|+||++|||||++|||+++|+.|+++|++|+++ +|+.++.          ..+...+++|++|+++++++++++.++
T Consensus         7 ~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~-~r~~~~~----------~~~~~~~~~Dv~~~~~v~~~~~~~~~~   75 (261)
T 4h15_A            7 LNLRGKRALITAGTKGAGAATVSLFLELGAQVLTT-ARARPEG----------LPEELFVEADLTTKEGCAIVAEATRQR   75 (261)
T ss_dssp             CCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEE-ESSCCTT----------SCTTTEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEE-ECCchhC----------CCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999985 5654311          122336899999999999999999999


Q ss_pred             cCCccEEEEccCCCCC--CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCC-CChhhHH
Q 024338          102 WGTVDILINNAGITRD--TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNI-GQANYSA  178 (269)
Q Consensus       102 ~~~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~-~~~~Y~~  178 (269)
                      +|++|+||||||+...  .++.+.+.++|++.+++|+.+++.++|+++|+|++++.|+||++||..+..+.| +...|++
T Consensus        76 ~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~~~~~~Y~a  155 (261)
T 4h15_A           76 LGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLPESTTAYAA  155 (261)
T ss_dssp             TSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTTCHHHHH
T ss_pred             cCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCCCccHHHHH
Confidence            9999999999997543  578999999999999999999999999999999999999999999999999986 6789999


Q ss_pred             hHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccCh--------------HHHHHHHhcCCCCCCCCHHHHHHHH
Q 024338          179 AKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGE--------------DLEKKILEKIPLGRYGQPEEVAGLV  244 (269)
Q Consensus       179 sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~a~~~  244 (269)
                      ||+|+.+|+++++.|++++|||||+|+||+++||+.....+              +..+.....+|++|+.+|+|+|+++
T Consensus       156 sKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peevA~~v  235 (261)
T 4h15_A          156 AKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPLGRPAKPEEVANLI  235 (261)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCCCCCcCHHHHHHHH
Confidence            99999999999999999999999999999999997643321              2233445678999999999999999


Q ss_pred             HHhccCCCCCCccccEEEecCCcc
Q 024338          245 EFLALNPAAGYITGQVLTIDGGMV  268 (269)
Q Consensus       245 ~~l~~~~~~~~~~G~~i~~dgg~~  268 (269)
                      +||+ +++++|+|||+|.||||++
T Consensus       236 ~fLa-S~~a~~itG~~i~VDGG~v  258 (261)
T 4h15_A          236 AFLA-SDRAASITGAEYTIDGGTV  258 (261)
T ss_dssp             HHHH-SGGGTTCCSCEEEESTTCS
T ss_pred             HHHh-CchhcCccCcEEEECCcCc
Confidence            9999 6788999999999999985

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=1.2e-51  Score=347.48  Aligned_cols=248  Identities=34%  Similarity=0.597  Sum_probs=231.8

Q ss_pred             ccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcC-CcEEEEEccCCCHHHHHHHHHHH
Q 024338           20 AAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASG-GQALTFGGDVSKEADVESMIKTA   98 (269)
Q Consensus        20 ~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dls~~~~~~~~~~~~   98 (269)
                      +++++++|++|||||++|||+++|++|+++|++|++ .+|+.+.+++..+++++.+ .++.++.+|++|.++++++++++
T Consensus         4 ~m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   82 (262)
T 3pk0_A            4 SMFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAV-AGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRA   82 (262)
T ss_dssp             CTTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHH
Confidence            367899999999999999999999999999999888 5899999998888887765 68999999999999999999999


Q ss_pred             HHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccc-cCCCCChhhH
Q 024338           99 VDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGL-VGNIGQANYS  177 (269)
Q Consensus        99 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~-~~~~~~~~Y~  177 (269)
                      .++++++|+||||||+....++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+. .+.++...|+
T Consensus        83 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~  162 (262)
T 3pk0_A           83 VEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYG  162 (262)
T ss_dssp             HHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCCTTCHHHH
T ss_pred             HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCCChhhH
Confidence            999999999999999988888999999999999999999999999999999988888999999999996 8889999999


Q ss_pred             HhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCcc
Q 024338          178 AAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYIT  257 (269)
Q Consensus       178 ~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~  257 (269)
                      +||++++.|+++++.|++++||+||+|+||+++|++.....++..+......|.+++.+|+|+|++++||+ +++++++|
T Consensus       163 asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~-s~~~~~it  241 (262)
T 3pk0_A          163 ATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENGEEYIASMARSIPAGALGTPEDIGHLAAFLA-TKEAGYIT  241 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHH-SGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh-CccccCCc
Confidence            99999999999999999999999999999999999887777777777888899999999999999999999 56778999


Q ss_pred             ccEEEecCCccC
Q 024338          258 GQVLTIDGGMVM  269 (269)
Q Consensus       258 G~~i~~dgg~~~  269 (269)
                      ||+|.+|||+.+
T Consensus       242 G~~i~vdGG~~~  253 (262)
T 3pk0_A          242 GQAIAVDGGQVL  253 (262)
T ss_dssp             SCEEEESTTTTC
T ss_pred             CCEEEECCCeec
Confidence            999999999874

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=100.00  E-value=1.3e-51  Score=344.55  Aligned_cols=244  Identities=50%  Similarity=0.811  Sum_probs=227.3

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      ++++++|++|||||++|||+++|++|+++|++|++ .+|+++.++++.+++.   .+...+.+|++|.++++++++++.+
T Consensus         4 ~~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~-~~r~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~   79 (248)
T 3op4_A            4 FMNLEGKVALVTGASRGIGKAIAELLAERGAKVIG-TATSESGAQAISDYLG---DNGKGMALNVTNPESIEAVLKAITD   79 (248)
T ss_dssp             TTCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEE-EESSHHHHHHHHHHHG---GGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHhc---ccceEEEEeCCCHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999988 5888888888777764   3577899999999999999999999


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhH
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                      +++++|+||||||+....++.+.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||..+..+.++...|++||
T Consensus        80 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  159 (248)
T 3op4_A           80 EFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAK  159 (248)
T ss_dssp             HHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHH
Confidence            99999999999999888889999999999999999999999999999999888889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccE
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQV  260 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~  260 (269)
                      ++++.|+++++.|++++||+||+|+||+++|++.+...++.........|.+++.+|+|+|++++||+ +++++++|||+
T Consensus       160 ~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~-s~~~~~itG~~  238 (248)
T 3op4_A          160 AGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALNDEQRTATLAQVPAGRLGDPREIASAVAFLA-SPEAAYITGET  238 (248)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHH-SGGGTTCCSCE
T ss_pred             HHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHc-CCccCCccCcE
Confidence            99999999999999999999999999999999988777776677778889999999999999999999 56778999999


Q ss_pred             EEecCCccC
Q 024338          261 LTIDGGMVM  269 (269)
Q Consensus       261 i~~dgg~~~  269 (269)
                      |.+|||+.+
T Consensus       239 i~vdgG~~~  247 (248)
T 3op4_A          239 LHVNGGMYM  247 (248)
T ss_dssp             EEESTTSSC
T ss_pred             EEECCCeec
Confidence            999999875

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=100.00  E-value=1.8e-51  Score=343.22  Aligned_cols=245  Identities=54%  Similarity=0.868  Sum_probs=231.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      +.+|++|||||++|||+++|++|+++|++|+++..++.+..+++.++++..+.++.++.+|++|.++++++++++.++++
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   81 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFG   81 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            45899999999999999999999999999998777788888888889988888999999999999999999999999999


Q ss_pred             CccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHH
Q 024338          104 TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGV  183 (269)
Q Consensus       104 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al  183 (269)
                      ++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|++||+++
T Consensus        82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~  161 (246)
T 3osu_A           82 SLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGV  161 (246)
T ss_dssp             CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHHHHH
Confidence            99999999999888888999999999999999999999999999999888889999999999999999999999999999


Q ss_pred             HHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEEEe
Q 024338          184 IGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTI  263 (269)
Q Consensus       184 ~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~  263 (269)
                      +.|+++++.|++++||+||+|+||+++|++.....+...+......|++++.+|+|+|++++||+ +++++++|||+|.+
T Consensus       162 ~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~-s~~~~~itG~~i~v  240 (246)
T 3osu_A          162 IGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQDTDIANTVAFLA-SDKAKYITGQTIHV  240 (246)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSCHHHHHHHHTTCTTCSCBCHHHHHHHHHHHT-SGGGTTCCSCEEEE
T ss_pred             HHHHHHHHHHhcccCeEEEEEEECCCcCCcccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh-CccccCCCCCEEEe
Confidence            99999999999999999999999999999988777777778888899999999999999999999 56778999999999


Q ss_pred             cCCccC
Q 024338          264 DGGMVM  269 (269)
Q Consensus       264 dgg~~~  269 (269)
                      |||+.|
T Consensus       241 dgG~~~  246 (246)
T 3osu_A          241 NGGMYM  246 (246)
T ss_dssp             STTSCC
T ss_pred             CCCccC
Confidence            999976

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=100.00  E-value=8.2e-52  Score=349.85  Aligned_cols=254  Identities=45%  Similarity=0.743  Sum_probs=232.1

Q ss_pred             hhhcccccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHH
Q 024338           14 EQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVES   93 (269)
Q Consensus        14 ~~~~~~~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~   93 (269)
                      +..|..+.+++++|++|||||++|||+++|+.|+++|++|++ .+|+.+.++++.+++++.+.++..+.+|++|.+++++
T Consensus        16 ~~gp~~m~~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~   94 (270)
T 3ftp_A           16 TQGPGSMDKTLDKQVAIVTGASRGIGRAIALELARRGAMVIG-TATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDA   94 (270)
T ss_dssp             -------CCTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEE-EESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHH
T ss_pred             CCCCcccccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHH
Confidence            334455667899999999999999999999999999999888 5889988988888888878888999999999999999


Q ss_pred             HHHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCC
Q 024338           94 MIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQ  173 (269)
Q Consensus        94 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~  173 (269)
                      +++++.++++++|+||||||+....++.+.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||..+..+.++.
T Consensus        95 ~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  174 (270)
T 3ftp_A           95 LVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQ  174 (270)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTB
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCc
Confidence            99999999999999999999988888889999999999999999999999999999988888999999999999999999


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCC
Q 024338          174 ANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAA  253 (269)
Q Consensus       174 ~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~  253 (269)
                      ..|++||++++.|+++++.|+++.||+||+|+||+++|++.....+..........|++++.+|+|+|++++||+ ++++
T Consensus       175 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~-s~~~  253 (270)
T 3ftp_A          175 VNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGLPQEQQTALKTQIPLGRLGSPEDIAHAVAFLA-SPQA  253 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHSCHHHHHHHHTTCTTCSCBCHHHHHHHHHHHH-SGGG
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhcCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh-CCCc
Confidence            999999999999999999999999999999999999999987777766677778889999999999999999999 5677


Q ss_pred             CCccccEEEecCCccC
Q 024338          254 GYITGQVLTIDGGMVM  269 (269)
Q Consensus       254 ~~~~G~~i~~dgg~~~  269 (269)
                      +++|||+|.+|||+.+
T Consensus       254 ~~itG~~i~vdGG~~~  269 (270)
T 3ftp_A          254 GYITGTTLHVNGGMFM  269 (270)
T ss_dssp             TTCCSCEEEESTTSSC
T ss_pred             CCccCcEEEECCCccc
Confidence            8999999999999874

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=100.00  E-value=3.4e-51  Score=343.58  Aligned_cols=246  Identities=39%  Similarity=0.599  Sum_probs=228.6

Q ss_pred             ccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHH
Q 024338           20 AAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAV   99 (269)
Q Consensus        20 ~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~   99 (269)
                      ..+++++|++|||||++|||+++|++|+++|++|++ .+|+.+.++++.+++++.+.++.++.+|++|.++++++++++.
T Consensus         6 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   84 (256)
T 3gaf_A            6 SPFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVV-TDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAAL   84 (256)
T ss_dssp             CTTCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEE-EESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence            457889999999999999999999999999999888 5889999999999998888899999999999999999999999


Q ss_pred             HhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHh
Q 024338          100 DAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAA  179 (269)
Q Consensus       100 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  179 (269)
                      ++++++|+||||||.....++ +.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|++|
T Consensus        85 ~~~g~id~lv~nAg~~~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  163 (256)
T 3gaf_A           85 DQFGKITVLVNNAGGGGPKPF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSS  163 (256)
T ss_dssp             HHHSCCCEEEECCCCCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCTTCHHHHHH
T ss_pred             HHcCCCCEEEECCCCCCCCCC-CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCCCchHHHHH
Confidence            999999999999999877777 8899999999999999999999999999998889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc-ChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccc
Q 024338          180 KAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL-GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITG  258 (269)
Q Consensus       180 K~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G  258 (269)
                      |++++.|+++++.|+++.||+||+|+||+++|++.... .++..+......|++++.+|+|+|++++||+ +++++++||
T Consensus       164 Kaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~L~-s~~~~~itG  242 (256)
T 3gaf_A          164 KAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPEIERAMLKHTPLGRLGEAQDIANAALFLC-SPAAAWISG  242 (256)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHH-SGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHc-CCcccCccC
Confidence            99999999999999999999999999999999987544 3455566677889999999999999999999 567789999


Q ss_pred             cEEEecCCcc
Q 024338          259 QVLTIDGGMV  268 (269)
Q Consensus       259 ~~i~~dgg~~  268 (269)
                      |+|.+|||+.
T Consensus       243 ~~i~vdgG~~  252 (256)
T 3gaf_A          243 QVLTVSGGGV  252 (256)
T ss_dssp             CEEEESTTSC
T ss_pred             CEEEECCCcc
Confidence            9999999986

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=100.00  E-value=8.5e-51  Score=341.50  Aligned_cols=244  Identities=31%  Similarity=0.515  Sum_probs=227.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      ++|++|||||++|||++++++|+++|++|+++..|+.+.++++.+++++.+.++.++.+|++|.++++++++++.+++++
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR   82 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            58999999999999999999999999999986689999999999999887889999999999999999999999999999


Q ss_pred             ccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHHH
Q 024338          105 VDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVI  184 (269)
Q Consensus       105 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~  184 (269)
                      +|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|++||++++
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~  162 (258)
T 3oid_A           83 LDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALE  162 (258)
T ss_dssp             CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCTTCHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCCCcHHHHHHHHHHH
Confidence            99999999988888899999999999999999999999999999999888899999999999999999999999999999


Q ss_pred             HHHHHHHHHhccCCeEEEEEecCCccCCcccccCh--HHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEEE
Q 024338          185 GLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGE--DLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLT  262 (269)
Q Consensus       185 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~  262 (269)
                      .|+++++.|+++.||+||+|+||+++|++......  +..+......|.+++.+|+|+|++++||+ ++.++++|||+|.
T Consensus       163 ~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~-s~~~~~itG~~i~  241 (258)
T 3oid_A          163 ALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPAGRMVEIKDMVDTVEFLV-SSKADMIRGQTII  241 (258)
T ss_dssp             HHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHCTTSSCBCHHHHHHHHHHHT-SSTTTTCCSCEEE
T ss_pred             HHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh-CcccCCccCCEEE
Confidence            99999999999999999999999999998876543  34556677889999999999999999999 5677899999999


Q ss_pred             ecCCccC
Q 024338          263 IDGGMVM  269 (269)
Q Consensus       263 ~dgg~~~  269 (269)
                      +|||+.+
T Consensus       242 vdGG~~~  248 (258)
T 3oid_A          242 VDGGRSL  248 (258)
T ss_dssp             ESTTGGG
T ss_pred             ECCCccC
Confidence            9999863

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=100.00  E-value=2.8e-51  Score=346.41  Aligned_cols=246  Identities=65%  Similarity=1.016  Sum_probs=228.2

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      .+++++|++|||||++|||+++|++|+++|++|+++..++.+..+++.++++..+.++.++.+|++|.++++++++++.+
T Consensus        23 ~~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~  102 (269)
T 4dmm_A           23 ALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIE  102 (269)
T ss_dssp             -CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            36789999999999999999999999999999998766688888888888888888999999999999999999999999


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhH
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                      +++++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|++||
T Consensus       103 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  182 (269)
T 4dmm_A          103 RWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAK  182 (269)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCchhHHHHH
Confidence            99999999999999888888999999999999999999999999999999888889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccE
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQV  260 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~  260 (269)
                      +++++|+++++.|++++||+||+|+||+++|++....   ..+......|++++.+|+|+|++++||++++.++++|||+
T Consensus       183 ~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~---~~~~~~~~~p~~r~~~~~dvA~~v~~l~s~~~~~~itG~~  259 (269)
T 4dmm_A          183 AGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSEL---AAEKLLEVIPLGRYGEAAEVAGVVRFLAADPAAAYITGQV  259 (269)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHH---HHHHHGGGCTTSSCBCHHHHHHHHHHHHHCGGGGGCCSCE
T ss_pred             HHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccc---cHHHHHhcCCCCCCCCHHHHHHHHHHHhCCcccCCCcCCE
Confidence            9999999999999999999999999999999986543   2255667889999999999999999999766788999999


Q ss_pred             EEecCCccC
Q 024338          261 LTIDGGMVM  269 (269)
Q Consensus       261 i~~dgg~~~  269 (269)
                      |.+|||+.+
T Consensus       260 i~vdGG~~~  268 (269)
T 4dmm_A          260 INIDGGLVM  268 (269)
T ss_dssp             EEESTTSCC
T ss_pred             EEECCCeec
Confidence            999999875

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=100.00  E-value=2.7e-51  Score=346.07  Aligned_cols=250  Identities=28%  Similarity=0.487  Sum_probs=228.9

Q ss_pred             ccccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHH-cCCcEEEEEccCCCHHHHHHHHH
Q 024338           18 NEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEA-SGGQALTFGGDVSKEADVESMIK   96 (269)
Q Consensus        18 ~~~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dls~~~~~~~~~~   96 (269)
                      ...++++++|++|||||++|||+++|+.|+++|++|++ .+|+.+.+++..+++.+ .+.++.++.+|++|.++++++++
T Consensus        12 ~~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~   90 (266)
T 4egf_A           12 YAGVLRLDGKRALITGATKGIGADIARAFAAAGARLVL-SGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELAR   90 (266)
T ss_dssp             BCGGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHH
T ss_pred             cccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHH
Confidence            34457899999999999999999999999999999888 58899888888888876 57789999999999999999999


Q ss_pred             HHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCeEEEEcCCccccCCCCChh
Q 024338           97 TAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK-KGRIINIASVVGLVGNIGQAN  175 (269)
Q Consensus        97 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~~~  175 (269)
                      ++.++++++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|.+++ .|+||++||..+..+.++...
T Consensus        91 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  170 (266)
T 4egf_A           91 RAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYA  170 (266)
T ss_dssp             HHHHHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHH
T ss_pred             HHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCCCChH
Confidence            9999999999999999998888899999999999999999999999999999997765 689999999999999999999


Q ss_pred             hHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc--ChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCC
Q 024338          176 YSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL--GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAA  253 (269)
Q Consensus       176 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~  253 (269)
                      |++||++++.|+++++.|+++.||+||+|+||+++|++....  .+..........|++++.+|+|+|++++||+ ++++
T Consensus       171 Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~-s~~~  249 (266)
T 4egf_A          171 YCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPLGRFAVPHEVSDAVVWLA-SDAA  249 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHH-SGGG
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHh-Cchh
Confidence            999999999999999999999999999999999999986543  3445556677889999999999999999999 5677


Q ss_pred             CCccccEEEecCCccC
Q 024338          254 GYITGQVLTIDGGMVM  269 (269)
Q Consensus       254 ~~~~G~~i~~dgg~~~  269 (269)
                      +++|||+|.+|||+++
T Consensus       250 ~~itG~~i~vdGG~~~  265 (266)
T 4egf_A          250 SMINGVDIPVDGGYTM  265 (266)
T ss_dssp             TTCCSCEEEESTTGGG
T ss_pred             cCccCcEEEECCCccC
Confidence            8999999999999874

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=100.00  E-value=4e-51  Score=345.81  Aligned_cols=247  Identities=34%  Similarity=0.581  Sum_probs=230.1

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      +++++||++|||||++|||+++|++|+++|++|++ .+|+.+.++++.++++..+.++.++.+|++|.++++++++++.+
T Consensus        21 ~~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   99 (271)
T 4ibo_A           21 IFDLGGRTALVTGSSRGLGRAMAEGLAVAGARILI-NGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDE   99 (271)
T ss_dssp             GGCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEE-CCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            46799999999999999999999999999999888 68999999999999988888999999999999999999999999


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhH
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                      +++++|+||||||+....++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|++||
T Consensus       100 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asK  179 (271)
T 4ibo_A          100 QGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARATVAPYTVAK  179 (271)
T ss_dssp             HTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHHHH
T ss_pred             HCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCCCchhHHHHH
Confidence            99999999999999888889999999999999999999999999999999888889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc--ChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccc
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL--GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITG  258 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G  258 (269)
                      ++++.|+++++.|+++.||+||+|+||+++|++....  .+...+......|.+++.+|+|+|++++||+ +++++++||
T Consensus       180 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~-s~~~~~itG  258 (271)
T 4ibo_A          180 GGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPAKRWGKPQELVGTAVFLS-ASASDYVNG  258 (271)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHCHHHHHHHHHHSTTCSCBCGGGGHHHHHHHH-SGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh-CccccCCCC
Confidence            9999999999999999999999999999999987654  2345566677889999999999999999999 567789999


Q ss_pred             cEEEecCCccC
Q 024338          259 QVLTIDGGMVM  269 (269)
Q Consensus       259 ~~i~~dgg~~~  269 (269)
                      |+|.+|||+.+
T Consensus       259 ~~i~vdGG~~~  269 (271)
T 4ibo_A          259 QIIYVDGGMLS  269 (271)
T ss_dssp             CEEEESTTGGG
T ss_pred             cEEEECCCeec
Confidence            99999999863

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=100.00  E-value=8.3e-51  Score=342.87  Aligned_cols=247  Identities=28%  Similarity=0.406  Sum_probs=222.8

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHH-cCC-cEEEEEccCCCHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEA-SGG-QALTFGGDVSKEADVESMIKTA   98 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~-~~~-~~~~~~~Dls~~~~~~~~~~~~   98 (269)
                      .+++++|++|||||++|||+++|++|+++|++|++ .+|+.+.+++..+++.. .+. ++.++.+|++|.++++++++++
T Consensus         3 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   81 (265)
T 3lf2_A            3 PYDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAF-CARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEAC   81 (265)
T ss_dssp             CCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHH
Confidence            46789999999999999999999999999999888 58999988888888876 333 5899999999999999999999


Q ss_pred             HHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHH
Q 024338           99 VDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSA  178 (269)
Q Consensus        99 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~  178 (269)
                      .+.++++|+||||||+....++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|++
T Consensus        82 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  161 (265)
T 3lf2_A           82 ERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSA  161 (265)
T ss_dssp             HHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCTTBHHHHH
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCCCchhhHH
Confidence            99999999999999998888899999999999999999999999999999998888899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC----------hHHHHHHHh--cCCCCCCCCHHHHHHHHHH
Q 024338          179 AKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG----------EDLEKKILE--KIPLGRYGQPEEVAGLVEF  246 (269)
Q Consensus       179 sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~----------~~~~~~~~~--~~~~~~~~~~~~~a~~~~~  246 (269)
                      ||+++++|+++++.|++++||+||+|+||+++|++.....          +........  ..|++++.+|+|+|++++|
T Consensus       162 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~f  241 (265)
T 3lf2_A          162 ARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAARAILF  241 (265)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCTTCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCCcCCCcCHHHHHHHHHH
Confidence            9999999999999999999999999999999999764321          112222222  2899999999999999999


Q ss_pred             hccCCCCCCccccEEEecCCccC
Q 024338          247 LALNPAAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       247 l~~~~~~~~~~G~~i~~dgg~~~  269 (269)
                      |+ ++.++++|||+|.+|||+++
T Consensus       242 L~-s~~~~~itG~~i~vdGG~~~  263 (265)
T 3lf2_A          242 LA-SPLSAYTTGSHIDVSGGLSR  263 (265)
T ss_dssp             HH-SGGGTTCCSEEEEESSSCCC
T ss_pred             Hh-CchhcCcCCCEEEECCCCcC
Confidence            99 66788999999999999874

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=100.00  E-value=5.2e-51  Score=348.62  Aligned_cols=252  Identities=36%  Similarity=0.587  Sum_probs=231.7

Q ss_pred             hcccccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcC-CcEEEEEccCCCHHHHHHH
Q 024338           16 ATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASG-GQALTFGGDVSKEADVESM   94 (269)
Q Consensus        16 ~~~~~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dls~~~~~~~~   94 (269)
                      .+...++++++|++|||||++|||+++|++|+++|++|++ .+|+.+.++++.+++.+.+ .++.++.+|++|.++++++
T Consensus        31 ~~~~~m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~  109 (293)
T 3rih_A           31 AERKVMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAV-AARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADA  109 (293)
T ss_dssp             ---CCTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEE-EESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHH
T ss_pred             cccccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHH
Confidence            3444567899999999999999999999999999999988 5888888888888887765 6899999999999999999


Q ss_pred             HHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccc-cCCCCC
Q 024338           95 IKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGL-VGNIGQ  173 (269)
Q Consensus        95 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~-~~~~~~  173 (269)
                      ++++.++++++|+||||||+....++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+. .+.++.
T Consensus       110 ~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~~~~  189 (293)
T 3rih_A          110 ARTVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGW  189 (293)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBBCTTC
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCCCCCC
Confidence            9999999999999999999988888999999999999999999999999999999988888999999999996 888999


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCC
Q 024338          174 ANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAA  253 (269)
Q Consensus       174 ~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~  253 (269)
                      ..|++||++++.|+++++.|+++.||+||+|+||+++|++.....++..+......|++++.+|+|+|++++||+ ++++
T Consensus       190 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~fL~-s~~a  268 (293)
T 3rih_A          190 SHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMGEEYISGMARSIPMGMLGSPVDIGHLAAFLA-TDEA  268 (293)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHH-SGGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh-Cccc
Confidence            999999999999999999999999999999999999999887776777777788899999999999999999999 5677


Q ss_pred             CCccccEEEecCCccC
Q 024338          254 GYITGQVLTIDGGMVM  269 (269)
Q Consensus       254 ~~~~G~~i~~dgg~~~  269 (269)
                      +++|||+|.+|||+.+
T Consensus       269 ~~itG~~i~vdGG~~~  284 (293)
T 3rih_A          269 GYITGQAIVVDGGQVL  284 (293)
T ss_dssp             TTCCSCEEEESTTTTC
T ss_pred             cCCCCCEEEECCCccC
Confidence            8999999999999874

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=5.3e-51  Score=346.68  Aligned_cols=250  Identities=29%  Similarity=0.514  Sum_probs=204.2

Q ss_pred             cccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHH
Q 024338           19 EAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTA   98 (269)
Q Consensus        19 ~~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~   98 (269)
                      .++.++++|++|||||++|||+++|+.|+++|++|+++..++.+.++++.+++...+.++.++++|++|.++++++++++
T Consensus        22 ~mm~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  101 (280)
T 4da9_A           22 SMMTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAV  101 (280)
T ss_dssp             -CCSCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHH
T ss_pred             hhhhccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH
Confidence            34567899999999999999999999999999999987667888888899999888889999999999999999999999


Q ss_pred             HHhcCCccEEEEccCC--CCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC---CCeEEEEcCCccccCCCCC
Q 024338           99 VDAWGTVDILINNAGI--TRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK---KGRIINIASVVGLVGNIGQ  173 (269)
Q Consensus        99 ~~~~~~id~li~~ag~--~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~~~iv~isS~~~~~~~~~~  173 (269)
                      .+.++++|+||||||+  ....++.+.+.++|++.+++|+.+++.++++++|.|.+++   .|+||++||..+..+.++.
T Consensus       102 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~  181 (280)
T 4da9_A          102 VAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPER  181 (280)
T ss_dssp             HHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------CC
T ss_pred             HHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCCCc
Confidence            9999999999999998  4457788999999999999999999999999999997755   7899999999999999999


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHh-cCCCCCCCCHHHHHHHHHHhccCCC
Q 024338          174 ANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILE-KIPLGRYGQPEEVAGLVEFLALNPA  252 (269)
Q Consensus       174 ~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~l~~~~~  252 (269)
                      ..|++||++++.|+++++.|+++.||+||+|+||+++|++.....+...+.... ..|++++.+|+|+|++++||+ +++
T Consensus       182 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~-s~~  260 (280)
T 4da9_A          182 LDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSGKYDGLIESGLVPMRRWGEPEDIGNIVAGLA-GGQ  260 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC----------------------CCBCHHHHHHHHHHHH-TST
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcchhHHHHHhhcCCCcCCcCCHHHHHHHHHHHh-Ccc
Confidence            999999999999999999999999999999999999999877655444444444 678899999999999999999 567


Q ss_pred             CCCccccEEEecCCccC
Q 024338          253 AGYITGQVLTIDGGMVM  269 (269)
Q Consensus       253 ~~~~~G~~i~~dgg~~~  269 (269)
                      ++++|||+|.+|||+.+
T Consensus       261 ~~~itG~~i~vdGG~~~  277 (280)
T 4da9_A          261 FGFATGSVIQADGGLSI  277 (280)
T ss_dssp             TGGGTTCEEEESTTCC-
T ss_pred             ccCCCCCEEEECCCccc
Confidence            78999999999999874

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=100.00  E-value=6.7e-51  Score=343.55  Aligned_cols=245  Identities=43%  Similarity=0.690  Sum_probs=215.8

Q ss_pred             ccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHH
Q 024338           20 AAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAV   99 (269)
Q Consensus        20 ~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~   99 (269)
                      .++++++|++|||||++|||+++|+.|+++|++|++ .+|+.+.++++.+++   +.++.++.+|++|.++++++++++.
T Consensus        21 ~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~-~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~   96 (266)
T 3grp_A           21 SMFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGL-HGTREDKLKEIAADL---GKDVFVFSANLSDRKSIKQLAEVAE   96 (266)
T ss_dssp             CTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHH---CSSEEEEECCTTSHHHHHHHHHHHH
T ss_pred             chhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHh---CCceEEEEeecCCHHHHHHHHHHHH
Confidence            356899999999999999999999999999999988 488888877776654   6689999999999999999999999


Q ss_pred             HhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHh
Q 024338          100 DAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAA  179 (269)
Q Consensus       100 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  179 (269)
                      +.++++|+||||||+....++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|++|
T Consensus        97 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~as  176 (266)
T 3grp_A           97 REMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAA  176 (266)
T ss_dssp             HHHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-------CHHHHHHH
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCCCCchhHHHH
Confidence            99999999999999988788889999999999999999999999999999988888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCcccc
Q 024338          180 KAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQ  259 (269)
Q Consensus       180 K~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~  259 (269)
                      |+|++.|+++++.|++++||+||+|+||+++|++.....+...+......|++++.+|+|+|++++||+ +++++++|||
T Consensus       177 Kaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~~v~~L~-s~~~~~itG~  255 (266)
T 3grp_A          177 KAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLNEKQKEAIMAMIPMKRMGIGEEIAFATVYLA-SDEAAYLTGQ  255 (266)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTCCHHHHHHHHTTCTTCSCBCHHHHHHHHHHHH-SGGGTTCCSC
T ss_pred             HHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh-CccccCccCC
Confidence            999999999999999999999999999999999988777777777788899999999999999999999 5677899999


Q ss_pred             EEEecCCccC
Q 024338          260 VLTIDGGMVM  269 (269)
Q Consensus       260 ~i~~dgg~~~  269 (269)
                      +|.+|||+.+
T Consensus       256 ~i~vdGG~~~  265 (266)
T 3grp_A          256 TLHINGGMAM  265 (266)
T ss_dssp             EEEESTTC--
T ss_pred             EEEECCCeee
Confidence            9999999875

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=1.5e-50  Score=341.15  Aligned_cols=247  Identities=26%  Similarity=0.414  Sum_probs=225.2

Q ss_pred             ccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHH
Q 024338           20 AAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAV   99 (269)
Q Consensus        20 ~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~   99 (269)
                      ++..+++|++|||||++|||+++|++|+++|++|++ .+|+.+.++++.+++.+.+.++.++.+|++|.++++++++++.
T Consensus         5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   83 (264)
T 3ucx_A            5 MGGLLTDKVVVISGVGPALGTTLARRCAEQGADLVL-AARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETM   83 (264)
T ss_dssp             --CTTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEE-EeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            455689999999999999999999999999999888 5899999999999998888899999999999999999999999


Q ss_pred             HhcCCccEEEEccCCC-CCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHH
Q 024338          100 DAWGTVDILINNAGIT-RDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSA  178 (269)
Q Consensus       100 ~~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~  178 (269)
                      ++++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|.+++ |+||++||..+..+.++...|++
T Consensus        84 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~a  162 (264)
T 3ucx_A           84 KAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRHSQAKYGAYKM  162 (264)
T ss_dssp             HHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGCCCTTCHHHHH
T ss_pred             HHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhccCCCccHHHHH
Confidence            9999999999999985 557888999999999999999999999999999997654 99999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC-----------hHHHHHHHhcCCCCCCCCHHHHHHHHHHh
Q 024338          179 AKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG-----------EDLEKKILEKIPLGRYGQPEEVAGLVEFL  247 (269)
Q Consensus       179 sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~a~~~~~l  247 (269)
                      ||++++.|+++++.|++++||+||+|+||+++|++.....           ++..+......|++++.+|+|+|++++||
T Consensus       163 sKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L  242 (264)
T 3ucx_A          163 AKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASAILFM  242 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSSSSSCCBHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccCCcccCCCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999865432           23445566778999999999999999999


Q ss_pred             ccCCCCCCccccEEEecCCccC
Q 024338          248 ALNPAAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       248 ~~~~~~~~~~G~~i~~dgg~~~  269 (269)
                      + ++.++++|||+|.+|||+++
T Consensus       243 ~-s~~~~~itG~~i~vdGG~~~  263 (264)
T 3ucx_A          243 A-SDLASGITGQALDVNCGEYK  263 (264)
T ss_dssp             H-SGGGTTCCSCEEEESTTSSC
T ss_pred             c-CccccCCCCCEEEECCCccC
Confidence            9 56778999999999999875

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=100.00  E-value=9.2e-51  Score=339.21  Aligned_cols=242  Identities=36%  Similarity=0.555  Sum_probs=220.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      .+++||++|||||++|||++++++|+++|++|++ .+|+.+.+++..+++   +.++.++.+|++|.++++++++++.+.
T Consensus         2 ~~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~-~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~   77 (247)
T 3rwb_A            2 ERLAGKTALVTGAAQGIGKAIAARLAADGATVIV-SDINAEGAKAAAASI---GKKARAIAADISDPGSVKALFAEIQAL   77 (247)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE-ECSCHHHHHHHHHHH---CTTEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            5688999999999999999999999999999888 588988888777766   678999999999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCeEEEEcCCccccCCCCChhhHHhH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK-KGRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                      ++++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|++++ .|+||++||..+..+.++...|++||
T Consensus        78 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  157 (247)
T 3rwb_A           78 TGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAK  157 (247)
T ss_dssp             HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTTCHHHHHHH
T ss_pred             CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCCchhhHHHH
Confidence            99999999999998888899999999999999999999999999999998765 79999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhc-CCCCCCCCHHHHHHHHHHhccCCCCCCcccc
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEK-IPLGRYGQPEEVAGLVEFLALNPAAGYITGQ  259 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~  259 (269)
                      +++++|+++++.|+++.||+||+|+||+++|++.....+......... .+++++.+|+|+|++++||+ +++++++|||
T Consensus       158 aa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~pedva~~v~~L~-s~~~~~itG~  236 (247)
T 3rwb_A          158 GGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNEAFGFVEMLQAMKGKGQPEHIADVVSFLA-SDDARWITGQ  236 (247)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGGGHHHHHHHSSSCSCBCHHHHHHHHHHHH-SGGGTTCCSC
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhHHHHHHhcccccCCCcCHHHHHHHHHHHh-CccccCCCCC
Confidence            999999999999999999999999999999998765544333333333 78888999999999999999 5677899999


Q ss_pred             EEEecCCcc
Q 024338          260 VLTIDGGMV  268 (269)
Q Consensus       260 ~i~~dgg~~  268 (269)
                      +|.+|||++
T Consensus       237 ~i~vdGG~~  245 (247)
T 3rwb_A          237 TLNVDAGMV  245 (247)
T ss_dssp             EEEESTTSS
T ss_pred             EEEECCCcc
Confidence            999999986

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.9e-50  Score=342.29  Aligned_cols=251  Identities=36%  Similarity=0.534  Sum_probs=215.9

Q ss_pred             ccccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHc-CCcEEEEEccCCCHHHHHHHHH
Q 024338           18 NEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS-GGQALTFGGDVSKEADVESMIK   96 (269)
Q Consensus        18 ~~~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dls~~~~~~~~~~   96 (269)
                      +.+++++.+|++|||||++|||+++|++|+++|++|+++..++.+.++++.+++... +.++.++.+|++|.++++++++
T Consensus        17 n~~~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~   96 (281)
T 3v2h_A           17 NLYFQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMA   96 (281)
T ss_dssp             -----CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHH
T ss_pred             chhhhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHH
Confidence            455678999999999999999999999999999999985433777888888888765 5689999999999999999999


Q ss_pred             HHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhh
Q 024338           97 TAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANY  176 (269)
Q Consensus        97 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y  176 (269)
                      ++.++++++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|
T Consensus        97 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  176 (281)
T 3v2h_A           97 MVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAY  176 (281)
T ss_dssp             HHHHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHH
T ss_pred             HHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCCCchHH
Confidence            99999999999999999988888999999999999999999999999999999988888999999999999999999999


Q ss_pred             HHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHH------------HHHHHhcCCCCCCCCHHHHHHHH
Q 024338          177 SAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDL------------EKKILEKIPLGRYGQPEEVAGLV  244 (269)
Q Consensus       177 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~a~~~  244 (269)
                      ++||++++.|+++++.|+++.||+||+|+||+++|++.....+..            .+......|.+++.+|+|+|+++
T Consensus       177 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~~v  256 (281)
T 3v2h_A          177 VAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQVASLA  256 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------CCTTCSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCCccCHHHHHHHH
Confidence            999999999999999999999999999999999999865432211            12244567889999999999999


Q ss_pred             HHhccCCCCCCccccEEEecCCccC
Q 024338          245 EFLALNPAAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       245 ~~l~~~~~~~~~~G~~i~~dgg~~~  269 (269)
                      +||+ +++++++|||+|.+|||+++
T Consensus       257 ~~L~-s~~a~~itG~~i~vdGG~~~  280 (281)
T 3v2h_A          257 LYLA-GDDAAQITGTHVSMDGGWTA  280 (281)
T ss_dssp             HHHH-SSGGGGCCSCEEEESTTGGG
T ss_pred             HHHc-CCCcCCCCCcEEEECCCccC
Confidence            9999 56778999999999999874

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=100.00  E-value=5.9e-50  Score=334.09  Aligned_cols=246  Identities=47%  Similarity=0.705  Sum_probs=231.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      |++++|++|||||++|||++++++|+++|++|++ ..|+++..+++.+++++.+.++.++.+|++|.++++++++++.+.
T Consensus         1 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (247)
T 3lyl_A            1 MSLNEKVALVTGASRGIGFEVAHALASKGATVVG-TATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAE   79 (247)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEE-EESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999888 588999999999999888889999999999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKA  181 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  181 (269)
                      ++++|+||||||.....++.+.+.+++++.+++|+.+++.+++.++|.|.+++.++||++||..+..+.++...|++||+
T Consensus        80 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  159 (247)
T 3lyl_A           80 NLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQTNYCAAKA  159 (247)
T ss_dssp             TCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCcHHHHHHHH
Confidence            99999999999998888888999999999999999999999999999998888899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEE
Q 024338          182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL  261 (269)
Q Consensus       182 al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i  261 (269)
                      +++.|+++++.|+++.||+|++|+||+++|++.....+...+......|.+++.+|+|+|++++||+ ++++.+++||+|
T Consensus       160 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~-s~~~~~~tG~~i  238 (247)
T 3lyl_A          160 GVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLTDEQKSFIATKIPSGQIGEPKDIAAAVAFLA-SEEAKYITGQTL  238 (247)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSCHHHHHHHHTTSTTCCCBCHHHHHHHHHHHH-SGGGTTCCSCEE
T ss_pred             HHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhccHHHHHHHhhcCCCCCCcCHHHHHHHHHHHh-CCCcCCccCCEE
Confidence            9999999999999999999999999999999988877777777778889999999999999999999 567789999999


Q ss_pred             EecCCccC
Q 024338          262 TIDGGMVM  269 (269)
Q Consensus       262 ~~dgg~~~  269 (269)
                      .+|||+.+
T Consensus       239 ~vdgG~~~  246 (247)
T 3lyl_A          239 HVNGGMYM  246 (247)
T ss_dssp             EESTTSSC
T ss_pred             EECCCEec
Confidence            99999975

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=100.00  E-value=5e-50  Score=340.57  Aligned_cols=247  Identities=35%  Similarity=0.528  Sum_probs=225.8

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      +.++++|++|||||++|||+++|++|+++|++|++ .+|+.+.++++.+++...+.++.++.+|++|.++++++++++.+
T Consensus         3 m~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   81 (280)
T 3tox_A            3 MSRLEGKIAIVTGASSGIGRAAALLFAREGAKVVV-TARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVR   81 (280)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEE-CCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            45689999999999999999999999999999888 68999999999988877778899999999999999999999999


Q ss_pred             hcCCccEEEEccCCC-CCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccc-cCCCCChhhHH
Q 024338          101 AWGTVDILINNAGIT-RDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGL-VGNIGQANYSA  178 (269)
Q Consensus       101 ~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~-~~~~~~~~Y~~  178 (269)
                      +++++|+||||||+. ...++.+.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||..+. .+.++...|++
T Consensus        82 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~a  161 (280)
T 3tox_A           82 RFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAA  161 (280)
T ss_dssp             HHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCCTTCHHHHH
T ss_pred             HcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCCCCchhHHH
Confidence            999999999999986 4478889999999999999999999999999999998889999999999998 78899999999


Q ss_pred             hHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccc-c---ChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCC
Q 024338          179 AKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAK-L---GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAG  254 (269)
Q Consensus       179 sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~  254 (269)
                      ||++++.|+++++.|+++.||+||+|+||+++|++... .   .+..........|++++.+|+|+|++++||+ ++.++
T Consensus       162 sKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~-s~~a~  240 (280)
T 3tox_A          162 SKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIARPEEIAEAALYLA-SDGAS  240 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTSTTSSCBCHHHHHHHHHHHH-SGGGT
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCccCCCcCHHHHHHHHHHHh-Ccccc
Confidence            99999999999999999999999999999999998654 2   3445556667789999999999999999999 56778


Q ss_pred             CccccEEEecCCccC
Q 024338          255 YITGQVLTIDGGMVM  269 (269)
Q Consensus       255 ~~~G~~i~~dgg~~~  269 (269)
                      ++|||+|.+|||+.+
T Consensus       241 ~itG~~i~vdGG~~~  255 (280)
T 3tox_A          241 FVTGAALLADGGASV  255 (280)
T ss_dssp             TCCSCEEEESTTGGG
T ss_pred             CCcCcEEEECCCccc
Confidence            999999999999863

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=100.00  E-value=6.1e-50  Score=336.45  Aligned_cols=245  Identities=32%  Similarity=0.535  Sum_probs=222.4

Q ss_pred             ccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHH
Q 024338           20 AAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAV   99 (269)
Q Consensus        20 ~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~   99 (269)
                      +++++++|++|||||++|||+++|++|+++|++|++ .+|+.+.+++..+++   +.++.++++|++|.++++++++++.
T Consensus         2 mm~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~-~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~   77 (259)
T 4e6p_A            2 MMKRLEGKSALITGSARGIGRAFAEAYVREGATVAI-ADIDIERARQAAAEI---GPAAYAVQMDVTRQDSIDAAIAATV   77 (259)
T ss_dssp             --CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHh---CCCceEEEeeCCCHHHHHHHHHHHH
Confidence            356789999999999999999999999999999888 588888888777766   5678899999999999999999999


Q ss_pred             HhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCeEEEEcCCccccCCCCChhhHH
Q 024338          100 DAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK-KGRIINIASVVGLVGNIGQANYSA  178 (269)
Q Consensus       100 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~~~Y~~  178 (269)
                      ++++++|+||||||+....++.+.+.++|++.+++|+.+++.++++++|.|.+++ .|+||++||..+..+.++...|++
T Consensus        78 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  157 (259)
T 4e6p_A           78 EHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCA  157 (259)
T ss_dssp             HHSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHH
T ss_pred             HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCCChHHHH
Confidence            9999999999999998888899999999999999999999999999999997765 789999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc-----------ChHHHHHHHhcCCCCCCCCHHHHHHHHHHh
Q 024338          179 AKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL-----------GEDLEKKILEKIPLGRYGQPEEVAGLVEFL  247 (269)
Q Consensus       179 sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l  247 (269)
                      ||++++.|+++++.|+++.||+||+|+||+++|++....           .++.........|++++.+|+|+|++++||
T Consensus       158 sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L  237 (259)
T 4e6p_A          158 TKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMAIFL  237 (259)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHHHHHHHH
Confidence            999999999999999999999999999999999986543           334445566778999999999999999999


Q ss_pred             ccCCCCCCccccEEEecCCccC
Q 024338          248 ALNPAAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       248 ~~~~~~~~~~G~~i~~dgg~~~  269 (269)
                      + +++++++|||+|.+|||+.+
T Consensus       238 ~-s~~~~~itG~~i~vdgG~~~  258 (259)
T 4e6p_A          238 A-SAESDYIVSQTYNVDGGNWM  258 (259)
T ss_dssp             T-SGGGTTCCSCEEEESTTSSC
T ss_pred             h-CCccCCCCCCEEEECcChhc
Confidence            9 56778999999999999864

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=100.00  E-value=2.8e-50  Score=342.04  Aligned_cols=246  Identities=38%  Similarity=0.584  Sum_probs=223.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      ..+++|++|||||++|||+++|++|+++|++|++ .+|+.+.++++.+++...+.++.++.+|++|.++++++++++.++
T Consensus        20 ~m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   98 (279)
T 3sju_A           20 HMSRPQTAFVTGVSSGIGLAVARTLAARGIAVYG-CARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVER   98 (279)
T ss_dssp             -----CEEEEESTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            3467899999999999999999999999999888 589999999999999887889999999999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHH--HHHhCCCCeEEEEcCCccccCCCCChhhHHh
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAK--IMMKKKKGRIINIASVVGLVGNIGQANYSAA  179 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  179 (269)
                      ++++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|  .|++++.|+||++||..+..+.++...|++|
T Consensus        99 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~as  178 (279)
T 3sju_A           99 FGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTAS  178 (279)
T ss_dssp             HCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCCCChhHHHH
Confidence            99999999999998888889999999999999999999999999999  5777788999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc-----------ChHHHHHHHhcCCCCCCCCHHHHHHHHHHhc
Q 024338          180 KAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL-----------GEDLEKKILEKIPLGRYGQPEEVAGLVEFLA  248 (269)
Q Consensus       180 K~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~  248 (269)
                      |+++++|+++++.|+++.||+||+|+||+++|++....           .++..+......|++++.+|+|+|++++||+
T Consensus       179 Kaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~  258 (279)
T 3sju_A          179 KHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPEEVAGLVGYLV  258 (279)
T ss_dssp             HHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCTTSSCBCHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999976542           2345566677889999999999999999999


Q ss_pred             cCCCCCCccccEEEecCCccC
Q 024338          249 LNPAAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       249 ~~~~~~~~~G~~i~~dgg~~~  269 (269)
                       +++++++|||+|.+|||+++
T Consensus       259 -s~~a~~itG~~i~vdGG~~~  278 (279)
T 3sju_A          259 -TDAAASITAQALNVCGGLGN  278 (279)
T ss_dssp             -SSGGGGCCSCEEEESTTCCC
T ss_pred             -CccccCcCCcEEEECCCccC
Confidence             56778999999999999874

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.2e-50  Score=340.62  Aligned_cols=244  Identities=41%  Similarity=0.617  Sum_probs=216.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      |.+++|++|||||++|||+++|++|+++|++|+++..++.+..+++.++++..+.++.++.+|++|.++++++++++.+.
T Consensus        23 m~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  102 (267)
T 3u5t_A           23 MMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEA  102 (267)
T ss_dssp             ----CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            45689999999999999999999999999999987788888888888888888889999999999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKA  181 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  181 (269)
                      ++++|+||||||+....++.+.+.++|++.+++|+.+++.++++++|.|++  .|+||++||..+..+.++...|++||+
T Consensus       103 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asKa  180 (267)
T 3u5t_A          103 FGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRV--GGRIINMSTSQVGLLHPSYGIYAAAKA  180 (267)
T ss_dssp             HSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCTHHHHCCTTCHHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh--CCeEEEEeChhhccCCCCchHHHHHHH
Confidence            999999999999988888999999999999999999999999999999943  589999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc-ChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccE
Q 024338          182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL-GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQV  260 (269)
Q Consensus       182 al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~  260 (269)
                      ++++|+++++.|+++.||+||+|+||+++|++.... .++..+......|++++.+|+|+|++++||+ ++.++++|||+
T Consensus       181 a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~-s~~~~~itG~~  259 (267)
T 3u5t_A          181 GVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDEVRDRFAKLAPLERLGTPQDIAGAVAFLA-GPDGAWVNGQV  259 (267)
T ss_dssp             HHHHHHHHHHHHTTTSCCEEEEEEECCBC-----------CHHHHHTSSTTCSCBCHHHHHHHHHHHH-STTTTTCCSEE
T ss_pred             HHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh-CccccCccCCE
Confidence            999999999999999999999999999999987542 2334456667789999999999999999999 56788999999


Q ss_pred             EEecCCcc
Q 024338          261 LTIDGGMV  268 (269)
Q Consensus       261 i~~dgg~~  268 (269)
                      |.+|||++
T Consensus       260 i~vdGG~~  267 (267)
T 3u5t_A          260 LRANGGII  267 (267)
T ss_dssp             EEESSSCC
T ss_pred             EEeCCCcC
Confidence            99999985

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=100.00  E-value=5.5e-50  Score=340.59  Aligned_cols=250  Identities=26%  Similarity=0.436  Sum_probs=225.7

Q ss_pred             ccccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCC---cEEEEEccCCCHHHHHHH
Q 024338           18 NEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGG---QALTFGGDVSKEADVESM   94 (269)
Q Consensus        18 ~~~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~---~~~~~~~Dls~~~~~~~~   94 (269)
                      ..+.+++++|++|||||++|||+++|++|+++|++|++ .+|+.+.+++..+++++.+.   ++.++.+|++|.++++++
T Consensus         3 ~~m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~   81 (281)
T 3svt_A            3 GSMQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMI-VGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARA   81 (281)
T ss_dssp             -----CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHH
T ss_pred             CCCccCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHH
Confidence            34567899999999999999999999999999999888 58999999888888887654   789999999999999999


Q ss_pred             HHHHHHhcCCccEEEEccCC-CCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCC
Q 024338           95 IKTAVDAWGTVDILINNAGI-TRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQ  173 (269)
Q Consensus        95 ~~~~~~~~~~id~li~~ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~  173 (269)
                      ++++.+.++++|+||||||. ....++.+.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||..+..+.++.
T Consensus        82 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  161 (281)
T 3svt_A           82 VDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWF  161 (281)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTC
T ss_pred             HHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCCCC
Confidence            99999999999999999997 45567889999999999999999999999999999998889999999999999999999


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc--ChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCC
Q 024338          174 ANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL--GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNP  251 (269)
Q Consensus       174 ~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~  251 (269)
                      ..|++||++++.|+++++.|++++||+||+|+||+++|++....  .+...+......|++++.+|+|+|++++||+ ++
T Consensus       162 ~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~-s~  240 (281)
T 3svt_A          162 GAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLPRQGEVEDVANMAMFLL-SD  240 (281)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCSSSSCBCHHHHHHHHHHHH-SG
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh-Cc
Confidence            99999999999999999999999999999999999999987653  3445566677889999999999999999999 56


Q ss_pred             CCCCccccEEEecCCccC
Q 024338          252 AAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       252 ~~~~~~G~~i~~dgg~~~  269 (269)
                      .++++|||+|.+|||+.+
T Consensus       241 ~~~~itG~~~~vdgG~~~  258 (281)
T 3svt_A          241 AASFVTGQVINVDGGQML  258 (281)
T ss_dssp             GGTTCCSCEEEESTTGGG
T ss_pred             ccCCCCCCEEEeCCChhc
Confidence            778999999999999863

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=100.00  E-value=8.4e-50  Score=337.59  Aligned_cols=246  Identities=33%  Similarity=0.550  Sum_probs=224.1

Q ss_pred             ccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHH
Q 024338           20 AAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAV   99 (269)
Q Consensus        20 ~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~   99 (269)
                      .+.++++|++|||||++|||+++|++|+++|++|+++..++.+..+++.+++++.+.++.++.+|++|.++++++++++.
T Consensus        12 ~~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   91 (270)
T 3is3_A           12 IPGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAV   91 (270)
T ss_dssp             CTTCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999977788888888999998888899999999999999999999999


Q ss_pred             HhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCc-cccCCCCChhhHH
Q 024338          100 DAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVV-GLVGNIGQANYSA  178 (269)
Q Consensus       100 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~-~~~~~~~~~~Y~~  178 (269)
                      ++++++|+||||||+....++.+.+.++|++.+++|+.+++.++++++|.|.+  .|+||++||.. +..+.++...|++
T Consensus        92 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~~Y~a  169 (270)
T 3is3_A           92 AHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTE--GGRIVLTSSNTSKDFSVPKHSLYSG  169 (270)
T ss_dssp             HHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT--TCEEEEECCTTTTTCCCTTCHHHHH
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCeEEEEeCchhccCCCCCCchhHH
Confidence            99999999999999988888999999999999999999999999999999944  78999999988 6678899999999


Q ss_pred             hHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccc-----------c-ChHHHHHHHhcCCCCCCCCHHHHHHHHHH
Q 024338          179 AKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAK-----------L-GEDLEKKILEKIPLGRYGQPEEVAGLVEF  246 (269)
Q Consensus       179 sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~-----------~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~~  246 (269)
                      ||++++.|+++++.|++++||+||+|+||+++|++...           . .+...+......|++++.+|+|+|++++|
T Consensus       170 sKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~  249 (270)
T 3is3_A          170 SKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVANVVGF  249 (270)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTTCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence            99999999999999999999999999999999998652           1 12344455667899999999999999999


Q ss_pred             hccCCCCCCccccEEEecCCcc
Q 024338          247 LALNPAAGYITGQVLTIDGGMV  268 (269)
Q Consensus       247 l~~~~~~~~~~G~~i~~dgg~~  268 (269)
                      |+ +++++++|||+|.+|||+.
T Consensus       250 L~-s~~~~~itG~~i~vdGG~~  270 (270)
T 3is3_A          250 LV-SKEGEWVNGKVLTLDGGAA  270 (270)
T ss_dssp             HT-SGGGTTCCSCEEEESTTCC
T ss_pred             Hc-CCccCCccCcEEEeCCCCC
Confidence            99 5678899999999999973

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=100.00  E-value=3.9e-50  Score=337.27  Aligned_cols=246  Identities=38%  Similarity=0.611  Sum_probs=222.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      .++++|++|||||++|||+++|++|+++|++|++ .+|+.+.++++.+++.+.+.++.++.+|++|.++++++++++.++
T Consensus         2 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (257)
T 3imf_A            2 NAMKEKVVIITGGSSGMGKGMATRFAKEGARVVI-TGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEK   80 (257)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999888 589999999888888777788999999999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hCCCCeEEEEcCCccccCCCCChhhHHhH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMM-KKKKGRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~-~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                      ++++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|. +++.|+||++||..+..+.++...|++||
T Consensus        81 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  160 (257)
T 3imf_A           81 FGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAK  160 (257)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTTCHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCCcHHHHHHH
Confidence            99999999999988888899999999999999999999999999999994 45689999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhc-cCCeEEEEEecCCccCCccccc---ChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCc
Q 024338          181 AGVIGLTKTVAKEYA-SRNINVNAIAPGFIASDMTAKL---GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYI  256 (269)
Q Consensus       181 ~al~~~~~~la~e~~-~~gi~v~~v~pG~v~t~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~  256 (269)
                      +++++|+++++.|++ +.||+||+|+||+++|++....   .+...+......|++++.+|+|+|++++||+ ++.++++
T Consensus       161 aa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~-s~~~~~i  239 (257)
T 3imf_A          161 AGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVPLGRLGTPEEIAGLAYYLC-SDEAAYI  239 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTSTTCSCBCHHHHHHHHHHHH-SGGGTTC
T ss_pred             HHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHc-CchhcCc
Confidence            999999999999997 7799999999999999975431   2223345566789999999999999999999 5677899


Q ss_pred             cccEEEecCCccC
Q 024338          257 TGQVLTIDGGMVM  269 (269)
Q Consensus       257 ~G~~i~~dgg~~~  269 (269)
                      |||+|.+|||+.+
T Consensus       240 tG~~i~vdGG~~~  252 (257)
T 3imf_A          240 NGTCMTMDGGQHL  252 (257)
T ss_dssp             CSCEEEESTTTTS
T ss_pred             cCCEEEECCCccc
Confidence            9999999999864

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=100.00  E-value=3.2e-50  Score=341.37  Aligned_cols=248  Identities=27%  Similarity=0.402  Sum_probs=217.6

Q ss_pred             cccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecC-------------CHHHHHHHHHHHHHcCCcEEEEEccC
Q 024338           19 EAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYAR-------------SSKEAEEVCKEIEASGGQALTFGGDV   85 (269)
Q Consensus        19 ~~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r-------------~~~~~~~~~~~l~~~~~~~~~~~~Dl   85 (269)
                      .++.++++|++|||||++|||+++|++|+++|++|+++ +|             +.+.+++..+++...+.++.++.+|+
T Consensus         4 ~m~~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   82 (277)
T 3tsc_A            4 SMAGKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAV-DIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDT   82 (277)
T ss_dssp             ---CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEE-ECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred             ccccccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEE-eccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCC
Confidence            35567899999999999999999999999999999885 44             67778888888887788999999999


Q ss_pred             CCHHHHHHHHHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCeEEEEcCC
Q 024338           86 SKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK-KGRIINIASV  164 (269)
Q Consensus        86 s~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~  164 (269)
                      +|.++++++++++.++++++|+||||||+....++.+.+.++|++.+++|+.+++.++++++|.|.+++ .|+||++||.
T Consensus        83 ~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~  162 (277)
T 3tsc_A           83 RDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSA  162 (277)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCG
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccH
Confidence            999999999999999999999999999998888889999999999999999999999999999998765 7899999999


Q ss_pred             ccccCCCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccCh-----------HHHHHHHhcCCCCC
Q 024338          165 VGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGE-----------DLEKKILEKIPLGR  233 (269)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~-----------~~~~~~~~~~~~~~  233 (269)
                      .+..+.++...|++||++++.|+++++.|++++||+||+|+||+++|++......           ..........|. +
T Consensus       163 ~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-r  241 (277)
T 3tsc_A          163 AGMKMQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLPD-W  241 (277)
T ss_dssp             GGTSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGGGTTTTCCSSSC-S
T ss_pred             hhCCCCCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHHHHHHhhhccCC-C
Confidence            9999999999999999999999999999999999999999999999998654111           001111122333 5


Q ss_pred             CCCHHHHHHHHHHhccCCCCCCccccEEEecCCccC
Q 024338          234 YGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       234 ~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg~~~  269 (269)
                      +.+|+|+|++++||+ +++++++|||+|.+|||+++
T Consensus       242 ~~~pedvA~~v~~L~-s~~~~~itG~~i~vdGG~~~  276 (277)
T 3tsc_A          242 VAEPEDIADTVCWLA-SDESRKVTAAQIPVDQGSTQ  276 (277)
T ss_dssp             CBCHHHHHHHHHHHH-SGGGTTCCSCEEEESTTGGG
T ss_pred             CCCHHHHHHHHHHHh-CccccCCcCCEEeeCCCccc
Confidence            789999999999999 56778999999999999863

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=100.00  E-value=2e-50  Score=343.56  Aligned_cols=248  Identities=33%  Similarity=0.540  Sum_probs=218.2

Q ss_pred             cccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHH
Q 024338           19 EAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTA   98 (269)
Q Consensus        19 ~~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~   98 (269)
                      ..++++++|++|||||++|||+++|++|+++|++|++ .+|+.+.++++.+++...+.++.++.+|++|.++++++++++
T Consensus        21 ~~m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~   99 (283)
T 3v8b_A           21 QSMMNQPSPVALITGAGSGIGRATALALAADGVTVGA-LGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDL   99 (283)
T ss_dssp             ------CCCEEEEESCSSHHHHHHHHHHHHTTCEEEE-EESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             hhhcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence            3457889999999999999999999999999999988 589999999999998877888999999999999999999999


Q ss_pred             HHhcCCccEEEEccCCCCC-CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcccc--CCCCChh
Q 024338           99 VDAWGTVDILINNAGITRD-TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLV--GNIGQAN  175 (269)
Q Consensus        99 ~~~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~--~~~~~~~  175 (269)
                      .+.++++|+||||||+... .++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..  +.++...
T Consensus       100 ~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~~~  179 (283)
T 3v8b_A          100 VLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATA  179 (283)
T ss_dssp             HHHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCSTTCHH
T ss_pred             HHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCCCCCchH
Confidence            9999999999999998654 788899999999999999999999999999999888889999999999987  7789999


Q ss_pred             hHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccCh--HH-----HHHHHhcCCC--CCCCCHHHHHHHHHH
Q 024338          176 YSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGE--DL-----EKKILEKIPL--GRYGQPEEVAGLVEF  246 (269)
Q Consensus       176 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~--~~-----~~~~~~~~~~--~~~~~~~~~a~~~~~  246 (269)
                      |++||+++++|+++++.|+++.||+||+|+||+++|++......  ..     .+......|+  +++.+|+|+|++++|
T Consensus       180 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~pedvA~~v~f  259 (283)
T 3v8b_A          180 YTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIRF  259 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCCCBCTTCSCGGGTTCCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchhhhhhhhhhhhcCccccCCCCCHHHHHHHHHH
Confidence            99999999999999999999999999999999999998765421  11     1112233455  788899999999999


Q ss_pred             hccCCCCCCccccEEEecCCcc
Q 024338          247 LALNPAAGYITGQVLTIDGGMV  268 (269)
Q Consensus       247 l~~~~~~~~~~G~~i~~dgg~~  268 (269)
                      |+ +++++++|||+|.+|||+.
T Consensus       260 L~-s~~a~~itG~~i~vdGG~~  280 (283)
T 3v8b_A          260 LV-SERARHVTGSPVWIDGGQG  280 (283)
T ss_dssp             HT-SGGGTTCCSCEEEESTTHH
T ss_pred             Hc-CccccCCcCCEEEECcCcc
Confidence            99 5678899999999999985

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=100.00  E-value=7.1e-50  Score=340.70  Aligned_cols=247  Identities=30%  Similarity=0.484  Sum_probs=218.4

Q ss_pred             ccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCC----------------HHHHHHHHHHHHHcCCcEEEEEc
Q 024338           20 AAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARS----------------SKEAEEVCKEIEASGGQALTFGG   83 (269)
Q Consensus        20 ~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~----------------~~~~~~~~~~l~~~~~~~~~~~~   83 (269)
                      ++.++++|++|||||++|||+++|+.|+++|++|+++ +|+                .+.++++.+++...+.++.++.+
T Consensus         5 m~~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (286)
T 3uve_A            5 MTGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAV-DICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEV   83 (286)
T ss_dssp             -CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEE-ECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEEC
T ss_pred             CCcccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEE-eccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEc
Confidence            5567899999999999999999999999999999885 444                77788888888877889999999


Q ss_pred             cCCCHHHHHHHHHHHHHhcCCccEEEEccCCCCCC-cccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCeEEEE
Q 024338           84 DVSKEADVESMIKTAVDAWGTVDILINNAGITRDT-LLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK-KGRIINI  161 (269)
Q Consensus        84 Dls~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~i  161 (269)
                      |++|.++++++++++.++++++|+||||||+.... ++.+.+.++|++.+++|+.+++.++++++|.|.+++ .|+||++
T Consensus        84 Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~i  163 (286)
T 3uve_A           84 DVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILT  163 (286)
T ss_dssp             CTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEE
T ss_pred             CCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEE
Confidence            99999999999999999999999999999987665 488999999999999999999999999999997755 7899999


Q ss_pred             cCCccccCCCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC-------------hHHHH---HH
Q 024338          162 ASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG-------------EDLEK---KI  225 (269)
Q Consensus       162 sS~~~~~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~-------------~~~~~---~~  225 (269)
                      ||..+..+.++...|++||+++++|+++++.|+++.||+||+|+||+++|++.....             .....   ..
T Consensus       164 sS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (286)
T 3uve_A          164 SSVGGLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQM  243 (286)
T ss_dssp             CCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHT
T ss_pred             CchhhccCCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccccccccchhhHHHHHHh
Confidence            999999999999999999999999999999999999999999999999999875311             11111   12


Q ss_pred             HhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEEEecCCccC
Q 024338          226 LEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       226 ~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg~~~  269 (269)
                      ....| +++.+|+|+|++++||+ +++++++|||+|.+|||+.+
T Consensus       244 ~~~~p-~r~~~p~dvA~~v~fL~-s~~a~~itG~~i~vdGG~~l  285 (286)
T 3uve_A          244 FHTLP-IPWVEPIDISNAVLFFA-SDEARYITGVTLPIDAGSCL  285 (286)
T ss_dssp             TCSSS-CSCBCHHHHHHHHHHHH-SGGGTTCCSCEEEESTTGGG
T ss_pred             hhccC-CCcCCHHHHHHHHHHHc-CccccCCcCCEEeECCcccc
Confidence            33455 78889999999999999 56788999999999999874

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=100.00  E-value=1.1e-49  Score=337.06  Aligned_cols=246  Identities=30%  Similarity=0.492  Sum_probs=221.0

Q ss_pred             ccccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHH
Q 024338           18 NEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKT   97 (269)
Q Consensus        18 ~~~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~   97 (269)
                      ..+++++++|++|||||++|||+++|++|+++|++|++ .+|+.+.+++..+++   +.++.++.+|++|.+++++++++
T Consensus         3 ~~m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~-~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~   78 (271)
T 3tzq_B            3 GSMTAELENKVAIITGACGGIGLETSRVLARAGARVVL-ADLPETDLAGAAASV---GRGAVHHVVDLTNEVSVRALIDF   78 (271)
T ss_dssp             ----CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE-EECTTSCHHHHHHHH---CTTCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEE-EcCCHHHHHHHHHHh---CCCeEEEECCCCCHHHHHHHHHH
Confidence            34567899999999999999999999999999999888 578877777776666   56788899999999999999999


Q ss_pred             HHHhcCCccEEEEccCCCC--CCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChh
Q 024338           98 AVDAWGTVDILINNAGITR--DTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQAN  175 (269)
Q Consensus        98 ~~~~~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~  175 (269)
                      +.++++++|+||||||...  ..++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...
T Consensus        79 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~  158 (271)
T 3tzq_B           79 TIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTA  158 (271)
T ss_dssp             HHHHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCSSCHH
T ss_pred             HHHHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCCCChH
Confidence            9999999999999999873  45678899999999999999999999999999999888999999999999999999999


Q ss_pred             hHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccc-ccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCC
Q 024338          176 YSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTA-KLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAG  254 (269)
Q Consensus       176 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~  254 (269)
                      |++||++++.|+++++.|++++||+||+|+||+++|++.. ...+...+......+.+++.+|+|+|++++||+ +++++
T Consensus       159 Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~p~dvA~~v~~L~-s~~~~  237 (271)
T 3tzq_B          159 YACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLPQPIVDIFATHHLAGRIGEPHEIAELVCFLA-SDRAA  237 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHH-SGGGT
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh-CcccC
Confidence            9999999999999999999999999999999999999876 445566667777889999999999999999999 56778


Q ss_pred             CccccEEEecCCcc
Q 024338          255 YITGQVLTIDGGMV  268 (269)
Q Consensus       255 ~~~G~~i~~dgg~~  268 (269)
                      ++|||+|.+|||+.
T Consensus       238 ~itG~~i~vdGG~~  251 (271)
T 3tzq_B          238 FITGQVIAADSGLL  251 (271)
T ss_dssp             TCCSCEEEESTTTT
T ss_pred             CcCCCEEEECCCcc
Confidence            99999999999953

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.1e-49  Score=335.25  Aligned_cols=243  Identities=37%  Similarity=0.601  Sum_probs=222.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      +++++|++|||||++|||+++|++|+++|++|+++..++.+..+++.+++++.+.++.++.+|++|.++++++++++.+.
T Consensus        27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  106 (271)
T 3v2g_A           27 ISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEA  106 (271)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999987677788888888999888889999999999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccC-CCCChhhHHhH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVG-NIGQANYSAAK  180 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~-~~~~~~Y~~sK  180 (269)
                      ++++|+||||||+....++.+.+.++|++.+++|+.+++.++++++|.|.  +.|+||++||..+..+ .++...|++||
T Consensus       107 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~--~~g~iv~isS~~~~~~~~~~~~~Y~asK  184 (271)
T 3v2g_A          107 LGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLG--DGGRIITIGSNLAELVPWPGISLYSASK  184 (271)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCC--TTCEEEEECCGGGTCCCSTTCHHHHHHH
T ss_pred             cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHh--cCCEEEEEeChhhccCCCCCchHHHHHH
Confidence            99999999999998888899999999999999999999999999999994  4789999999877665 78999999999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccE
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQV  260 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~  260 (269)
                      ++++.|+++++.|+++.||+||+|+||+++|++..... ...+......|.+++.+|+|+|++++||+ +++++++|||+
T Consensus       185 aa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~r~~~pedvA~~v~fL~-s~~~~~itG~~  262 (271)
T 3v2g_A          185 AALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADG-DHAEAQRERIATGSYGEPQDIAGLVAWLA-GPQGKFVTGAS  262 (271)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSC-SSHHHHHHTCTTSSCBCHHHHHHHHHHHH-SGGGTTCCSCE
T ss_pred             HHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccc-hhHHHHHhcCCCCCCCCHHHHHHHHHHHh-CcccCCccCCE
Confidence            99999999999999999999999999999999876533 33455567789999999999999999999 56788999999


Q ss_pred             EEecCCcc
Q 024338          261 LTIDGGMV  268 (269)
Q Consensus       261 i~~dgg~~  268 (269)
                      |.+|||++
T Consensus       263 i~vdGG~~  270 (271)
T 3v2g_A          263 LTIDGGAN  270 (271)
T ss_dssp             EEESTTTT
T ss_pred             EEeCcCcc
Confidence            99999986

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=100.00  E-value=9.4e-50  Score=338.25  Aligned_cols=246  Identities=39%  Similarity=0.609  Sum_probs=225.1

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      .+++++|++|||||++|||+++|++|+++|++|++ .+|+.+.++++.+++...+.++.++++|++|.++++++++++.+
T Consensus        27 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  105 (276)
T 3r1i_A           27 LFDLSGKRALITGASTGIGKKVALAYAEAGAQVAV-AARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTG  105 (276)
T ss_dssp             GGCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEE-EESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            46889999999999999999999999999999888 57888888889999988888899999999999999999999999


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCeEEEEcCCccccCC--CCChhhH
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK-KGRIINIASVVGLVGN--IGQANYS  177 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~--~~~~~Y~  177 (269)
                      +++++|+||||||+....++.+.+.++|++.+++|+.+++.++++++|.|.+++ .++||++||..+..+.  ++...|+
T Consensus       106 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~  185 (276)
T 3r1i_A          106 ELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYC  185 (276)
T ss_dssp             HHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCSSCCHHHH
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCCCCcchHH
Confidence            999999999999998888889999999999999999999999999999998765 4899999999988764  3678999


Q ss_pred             HhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCcc
Q 024338          178 AAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYIT  257 (269)
Q Consensus       178 ~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~  257 (269)
                      +||++++.|+++++.|+++.||+||+|+||+++|++..... +..+......|++++.+|+|+|++++||+ +++++++|
T Consensus       186 asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~-~~~~~~~~~~p~~r~~~pedvA~~v~fL~-s~~~~~it  263 (276)
T 3r1i_A          186 TSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLA-DYHALWEPKIPLGRMGRPEELTGLYLYLA-SAASSYMT  263 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGG-GGHHHHGGGSTTSSCBCGGGSHHHHHHHH-SGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccch-HHHHHHHhcCCCCCCcCHHHHHHHHHHHc-CccccCcc
Confidence            99999999999999999999999999999999999887653 34455667889999999999999999999 56788999


Q ss_pred             ccEEEecCCccC
Q 024338          258 GQVLTIDGGMVM  269 (269)
Q Consensus       258 G~~i~~dgg~~~  269 (269)
                      ||+|.+|||+++
T Consensus       264 G~~i~vdGG~~~  275 (276)
T 3r1i_A          264 GSDIVIDGGYTC  275 (276)
T ss_dssp             SCEEEESTTTTC
T ss_pred             CcEEEECcCccC
Confidence            999999999864

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=100.00  E-value=1.1e-49  Score=337.45  Aligned_cols=245  Identities=36%  Similarity=0.620  Sum_probs=221.6

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      .++++||++|||||++|||+++|++|+++|++|+++ +|+ +..++..+++.+.+.++.++.+|++|.++++++. +..+
T Consensus        26 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~-~r~-~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~-~~~~  102 (273)
T 3uf0_A           26 PFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAW-GRT-DGVKEVADEIADGGGSAEAVVADLADLEGAANVA-EELA  102 (273)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ESS-THHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHH-HHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE-cCH-HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHH-HHHH
Confidence            467899999999999999999999999999999886 455 4566777788777888999999999999999995 4456


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhH
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                      .++++|+||||||+....++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|++||
T Consensus       103 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asK  182 (273)
T 3uf0_A          103 ATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASK  182 (273)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSCHHHHHHH
T ss_pred             hcCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCCCChhHHHHH
Confidence            67999999999999888889999999999999999999999999999999888889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc--ChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccc
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL--GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITG  258 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G  258 (269)
                      ++++.|+++++.|+++.||+||+|+||+++|++....  .+...+......|.+++.+|+|+|++++||+ +++++++||
T Consensus       183 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~-s~~a~~itG  261 (273)
T 3uf0_A          183 HAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITARIPAGRWATPEDMVGPAVFLA-SDAASYVHG  261 (273)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHSTTSSCBCGGGGHHHHHHHH-SGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh-CchhcCCcC
Confidence            9999999999999999999999999999999987543  3455566677889999999999999999999 567789999


Q ss_pred             cEEEecCCccC
Q 024338          259 QVLTIDGGMVM  269 (269)
Q Consensus       259 ~~i~~dgg~~~  269 (269)
                      |+|.+|||+.+
T Consensus       262 ~~i~vdGG~~~  272 (273)
T 3uf0_A          262 QVLAVDGGWLA  272 (273)
T ss_dssp             CEEEESTTGGG
T ss_pred             CEEEECcCccC
Confidence            99999999863

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=100.00  E-value=3e-49  Score=338.91  Aligned_cols=249  Identities=32%  Similarity=0.544  Sum_probs=218.9

Q ss_pred             ccccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCC------------HHHHHHHHHHHHHcCCcEEEEEccC
Q 024338           18 NEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARS------------SKEAEEVCKEIEASGGQALTFGGDV   85 (269)
Q Consensus        18 ~~~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~------------~~~~~~~~~~l~~~~~~~~~~~~Dl   85 (269)
                      ..++.++++|++|||||++|||+++|+.|+++|++|+++ +|+            .+.+++..+++...+.++.++.+|+
T Consensus        20 ~~m~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv   98 (299)
T 3t7c_A           20 GSMAGKVEGKVAFITGAARGQGRSHAITLAREGADIIAI-DVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDV   98 (299)
T ss_dssp             --CCCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEE-ECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred             cccccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE-ecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCC
Confidence            334567899999999999999999999999999999885 444            7778888888888888999999999


Q ss_pred             CCHHHHHHHHHHHHHhcCCccEEEEccCCCCCCc-ccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCeEEEEcC
Q 024338           86 SKEADVESMIKTAVDAWGTVDILINNAGITRDTL-LMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK-KGRIINIAS  163 (269)
Q Consensus        86 s~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS  163 (269)
                      +|.++++++++++.+.++++|+||||||+..... +.+.+.++|++.+++|+.+++.++++++|.|.+++ .|+||++||
T Consensus        99 ~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS  178 (299)
T 3t7c_A           99 RDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSS  178 (299)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECC
Confidence            9999999999999999999999999999876654 88999999999999999999999999999987664 789999999


Q ss_pred             CccccCCCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC--------------hHH--HHHHHh
Q 024338          164 VVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG--------------EDL--EKKILE  227 (269)
Q Consensus       164 ~~~~~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~--------------~~~--~~~~~~  227 (269)
                      ..+..+.++...|++||+++++|+++++.|+++.||+||+|+||+++|++.....              ...  ......
T Consensus       179 ~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (299)
T 3t7c_A          179 IGGLRGAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMH  258 (299)
T ss_dssp             GGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHHHS
T ss_pred             hhhccCCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHhhhhc
Confidence            9999999999999999999999999999999999999999999999999865311              011  111334


Q ss_pred             cCCCCCCCCHHHHHHHHHHhccCCCCCCccccEEEecCCccC
Q 024338          228 KIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       228 ~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg~~~  269 (269)
                      ..| +++.+|+|+|++++||+ +++++++|||+|.+|||+++
T Consensus       259 ~~p-~r~~~pedvA~~v~fL~-s~~a~~itG~~i~vdGG~~l  298 (299)
T 3t7c_A          259 VLP-IPYVEPADISNAILFLV-SDDARYITGVSLPVDGGALL  298 (299)
T ss_dssp             SSS-CSCBCHHHHHHHHHHHH-SGGGTTCCSCEEEESTTGGG
T ss_pred             ccC-cCCCCHHHHHHHHHHHh-CcccccCcCCEEeeCCCccc
Confidence            455 77889999999999999 56788999999999999874

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=100.00  E-value=1.2e-49  Score=336.87  Aligned_cols=249  Identities=40%  Similarity=0.661  Sum_probs=222.0

Q ss_pred             ccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHH
Q 024338           20 AAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAV   99 (269)
Q Consensus        20 ~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~   99 (269)
                      ..|++++|++|||||++|||+++|++|+++|++|+++.+++.+..+++.+++++.+.++.++.+|++|.++++++++++.
T Consensus        23 ~~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~  102 (271)
T 4iin_A           23 NAMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIV  102 (271)
T ss_dssp             -CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             hhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999865557777788888888888899999999999999999999999


Q ss_pred             HhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHh
Q 024338          100 DAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAA  179 (269)
Q Consensus       100 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  179 (269)
                      +.++++|+||||||.....++.+.+.+++++.+++|+.+++.+++.++|.|++++.++||++||..+..+.++...|++|
T Consensus       103 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  182 (271)
T 4iin_A          103 QSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQTNYSAS  182 (271)
T ss_dssp             HHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHH
T ss_pred             HhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCCCchHhHHH
Confidence            99999999999999988888889999999999999999999999999999988888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCcccc
Q 024338          180 KAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQ  259 (269)
Q Consensus       180 K~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~  259 (269)
                      |++++.|+++++.|+++.||+|++|+||+++|++.....+..........|.+++.+|+|+|++++||+ ++++.+++||
T Consensus       183 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~i~~l~-s~~~~~itG~  261 (271)
T 4iin_A          183 KGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDELKADYVKNIPLNRLGSAKEVAEAVAFLL-SDHSSYITGE  261 (271)
T ss_dssp             HHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC------------CGGGCTTCSCBCHHHHHHHHHHHH-SGGGTTCCSC
T ss_pred             HHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcHHHHHHHHhcCCcCCCcCHHHHHHHHHHHh-CCCcCCCcCC
Confidence            999999999999999999999999999999999987766666666677889999999999999999999 5567799999


Q ss_pred             EEEecCCccC
Q 024338          260 VLTIDGGMVM  269 (269)
Q Consensus       260 ~i~~dgg~~~  269 (269)
                      +|.+|||+.|
T Consensus       262 ~i~vdGG~~~  271 (271)
T 4iin_A          262 TLKVNGGLYM  271 (271)
T ss_dssp             EEEESTTSCC
T ss_pred             EEEeCCCeeC
Confidence            9999999986

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=9.5e-50  Score=334.54  Aligned_cols=250  Identities=35%  Similarity=0.601  Sum_probs=228.8

Q ss_pred             cccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHH
Q 024338           19 EAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTA   98 (269)
Q Consensus        19 ~~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~   98 (269)
                      ......++|++|||||++|||+++|++|+++|++|+++..++.+..++..+++++.+.++.++.+|++|.++++++++++
T Consensus         6 ~~~~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   85 (256)
T 3ezl_A            6 HHHMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKV   85 (256)
T ss_dssp             -------CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHH
Confidence            34566789999999999999999999999999999987667777777788888877888999999999999999999999


Q ss_pred             HHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHH
Q 024338           99 VDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSA  178 (269)
Q Consensus        99 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~  178 (269)
                      .+.++++|+||||||.....++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.++...|++
T Consensus        86 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  165 (256)
T 3ezl_A           86 KAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYST  165 (256)
T ss_dssp             HHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCSCCHHHHH
T ss_pred             HHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCCCCcccHH
Confidence            99999999999999998888888999999999999999999999999999998888899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccc
Q 024338          179 AKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITG  258 (269)
Q Consensus       179 sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G  258 (269)
                      ||++++.|+++++.|++++||+|++|+||+++|++.+...+...+......|.+++.+|+|+|++++||+ ++++.+++|
T Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~-s~~~~~~tG  244 (256)
T 3ezl_A          166 AKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATIPVRRLGSPDEIGSIVAWLA-SEESGFSTG  244 (256)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHH-SGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh-CCcccCCcC
Confidence            9999999999999999999999999999999999988887888888888899999999999999999999 567789999


Q ss_pred             cEEEecCCccC
Q 024338          259 QVLTIDGGMVM  269 (269)
Q Consensus       259 ~~i~~dgg~~~  269 (269)
                      |+|.+|||+.+
T Consensus       245 ~~i~vdgG~~~  255 (256)
T 3ezl_A          245 ADFSLNGGLHM  255 (256)
T ss_dssp             CEEEESTTSCC
T ss_pred             cEEEECCCEeC
Confidence            99999999875

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=100.00  E-value=3.9e-49  Score=329.12  Aligned_cols=246  Identities=57%  Similarity=0.919  Sum_probs=223.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      ++++|++|||||++|||++++++|+++|++|+++.+++++.++++.++++..+.++.++.+|++|.++++++++++.+.+
T Consensus         1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (246)
T 2uvd_A            1 MLKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVF   80 (246)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            36789999999999999999999999999998864448888888888887777789999999999999999999999999


Q ss_pred             CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHH
Q 024338          103 GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAG  182 (269)
Q Consensus       103 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  182 (269)
                      +++|+||||||.....++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.++...|++||++
T Consensus        81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a  160 (246)
T 2uvd_A           81 GQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAG  160 (246)
T ss_dssp             SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTBHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCCCCchHHHHHHH
Confidence            99999999999887778889999999999999999999999999999988778999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEEE
Q 024338          183 VIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLT  262 (269)
Q Consensus       183 l~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~  262 (269)
                      ++.|+++++.|+++.||+||+|+||+++|++.....+...+......|.+++.+|+|+|++++||+ ++++++++|++|.
T Consensus       161 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~-s~~~~~~tG~~~~  239 (246)
T 2uvd_A          161 VIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLDENIKAEMLKLIPAAQFGEAQDIANAVTFFA-SDQSKYITGQTLN  239 (246)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCCTTHHHHHHHTCTTCSCBCHHHHHHHHHHHH-SGGGTTCCSCEEE
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHc-CchhcCCCCCEEE
Confidence            999999999999999999999999999999876554444445556678888999999999999999 5667899999999


Q ss_pred             ecCCccC
Q 024338          263 IDGGMVM  269 (269)
Q Consensus       263 ~dgg~~~  269 (269)
                      +|||+.+
T Consensus       240 vdgG~~~  246 (246)
T 2uvd_A          240 VDGGMVM  246 (246)
T ss_dssp             ESTTSCC
T ss_pred             ECcCccC
Confidence            9999864

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=100.00  E-value=4.3e-49  Score=334.36  Aligned_cols=245  Identities=33%  Similarity=0.561  Sum_probs=221.1

Q ss_pred             ccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHH
Q 024338           20 AAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAV   99 (269)
Q Consensus        20 ~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~   99 (269)
                      ..+++++|++|||||++|||+++|++|+++|++|++ .+|+.+.++++.+++   +.++.++.+|++|.++++++++++.
T Consensus        21 ~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~-~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~   96 (277)
T 4dqx_A           21 QSMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVV-ADVNEDAAVRVANEI---GSKAFGVRVDVSSAKDAESMVEKTT   96 (277)
T ss_dssp             -CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE-EESSHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHH
Confidence            347789999999999999999999999999999988 578888877777664   5688999999999999999999999


Q ss_pred             HhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHh
Q 024338          100 DAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAA  179 (269)
Q Consensus       100 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  179 (269)
                      +.++++|+||||||+....++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|++|
T Consensus        97 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  176 (277)
T 4dqx_A           97 AKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADRTAYVAS  176 (277)
T ss_dssp             HHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCCCChhHHHH
Confidence            99999999999999988888899999999999999999999999999999988888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc------ChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCC
Q 024338          180 KAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL------GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAA  253 (269)
Q Consensus       180 K~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~  253 (269)
                      |+|+++|+++++.|+++.||+||+|+||+++|++....      ............|++++.+|+|+|++++||+ ++++
T Consensus       177 Kaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~-s~~~  255 (277)
T 4dqx_A          177 KGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAEAMLFLA-SDRS  255 (277)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTSTTCSCBCHHHHHHHHHHHH-SGGG
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcCcccCCcCHHHHHHHHHHHh-CCcc
Confidence            99999999999999999999999999999999974321      1222333667788999999999999999999 5677


Q ss_pred             CCccccEEEecCCccC
Q 024338          254 GYITGQVLTIDGGMVM  269 (269)
Q Consensus       254 ~~~~G~~i~~dgg~~~  269 (269)
                      +++||++|.+|||+.+
T Consensus       256 ~~itG~~i~vdGG~~~  271 (277)
T 4dqx_A          256 RFATGSILTVDGGSSI  271 (277)
T ss_dssp             TTCCSCEEEESSSSSS
T ss_pred             CCCcCCEEEECCchhh
Confidence            8999999999999864

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=100.00  E-value=1.3e-49  Score=337.56  Aligned_cols=245  Identities=29%  Similarity=0.439  Sum_probs=223.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHH-cCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEA-SGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      ..+++|++|||||++|||+++|++|+++|++|++ .+|+.+.+++..+++.. .+.++.++.+|++|.++++++++++.+
T Consensus        23 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  101 (277)
T 4fc7_A           23 DLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVI-ASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALK  101 (277)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEE-EESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            4589999999999999999999999999999988 58888888887777754 367899999999999999999999999


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhH
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                      +++++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||..+..+.++...|++||
T Consensus       102 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  181 (277)
T 4fc7_A          102 EFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAK  181 (277)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCTTCHHHHHHH
T ss_pred             HcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCcHHHHHHH
Confidence            99999999999998877888999999999999999999999999999999887889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccc---cChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCcc
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAK---LGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYIT  257 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~  257 (269)
                      +++++|+++++.|++++||+||+|+||+++|++...   ..+...+......|++++.+|+|+|++++||+ +++++++|
T Consensus       182 aa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~fL~-s~~~~~it  260 (277)
T 4fc7_A          182 AAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVLYLA-SPLASYVT  260 (277)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTSTTSSCBCHHHHHHHHHHHH-SGGGTTCC
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCCCCCCcCHHHHHHHHHHHc-CCccCCcC
Confidence            999999999999999999999999999999985321   12445556677889999999999999999999 56788999


Q ss_pred             ccEEEecCCcc
Q 024338          258 GQVLTIDGGMV  268 (269)
Q Consensus       258 G~~i~~dgg~~  268 (269)
                      ||+|.+|||+.
T Consensus       261 G~~i~vdGG~~  271 (277)
T 4fc7_A          261 GAVLVADGGAW  271 (277)
T ss_dssp             SCEEEESTTHH
T ss_pred             CCEEEECCCcc
Confidence            99999999975

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=100.00  E-value=3.8e-50  Score=340.49  Aligned_cols=253  Identities=30%  Similarity=0.437  Sum_probs=226.5

Q ss_pred             hhhhhcccccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHH
Q 024338           12 TIEQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADV   91 (269)
Q Consensus        12 ~~~~~~~~~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~   91 (269)
                      ........+.++++||++|||||++|||+++|++|+++|++|++ .+|+.+.++++.+++...+.++.++.+|++|.+++
T Consensus        19 ~~~~~~~~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~   97 (275)
T 4imr_A           19 YFQSMRLETIFGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVIL-HGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAG   97 (275)
T ss_dssp             CSCTTSHHHHHCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEE-EESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHH
T ss_pred             ccccccccccCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEE-EcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHH
Confidence            33444445567899999999999999999999999999999888 57888888888888888888999999999999999


Q ss_pred             HHHHHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCC
Q 024338           92 ESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNI  171 (269)
Q Consensus        92 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~  171 (269)
                      +++++++.+. +++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.+
T Consensus        98 ~~~~~~~~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~  176 (275)
T 4imr_A           98 TDLIERAEAI-APVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKS  176 (275)
T ss_dssp             HHHHHHHHHH-SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT
T ss_pred             HHHHHHHHHh-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCC
Confidence            9999999887 999999999999888889999999999999999999999999999999888889999999999999988


Q ss_pred             CChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc---ChHHHHHHHhcC-CCCCCCCHHHHHHHHHHh
Q 024338          172 GQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL---GEDLEKKILEKI-PLGRYGQPEEVAGLVEFL  247 (269)
Q Consensus       172 ~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~a~~~~~l  247 (269)
                      +...|++||++++.|+++++.|+++.||+||+|+||+++|++....   .+...+...... |++++.+|+|+|++++||
T Consensus       177 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL  256 (275)
T 4imr_A          177 VVTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWMGRAGRPEEMVGAALFL  256 (275)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHSTTCSCBCGGGGHHHHHHH
T ss_pred             CchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhcCccCCCcCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999986543   233333444444 889999999999999999


Q ss_pred             ccCCCCCCccccEEEecCCc
Q 024338          248 ALNPAAGYITGQVLTIDGGM  267 (269)
Q Consensus       248 ~~~~~~~~~~G~~i~~dgg~  267 (269)
                      + +++++++|||+|.+|||+
T Consensus       257 ~-s~~a~~itG~~i~vdGG~  275 (275)
T 4imr_A          257 A-SEACSFMTGETIFLTGGY  275 (275)
T ss_dssp             H-SGGGTTCCSCEEEESSCC
T ss_pred             c-CcccCCCCCCEEEeCCCC
Confidence            9 567789999999999996

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=100.00  E-value=7.3e-49  Score=333.64  Aligned_cols=246  Identities=37%  Similarity=0.574  Sum_probs=217.7

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCC------------HHHHHHHHHHHHHcCCcEEEEEccCCCH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARS------------SKEAEEVCKEIEASGGQALTFGGDVSKE   88 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~------------~~~~~~~~~~l~~~~~~~~~~~~Dls~~   88 (269)
                      ++++++|++|||||++|||+++|++|+++|++|+++ +|+            .+.+++..+++...+.++.++.+|++|.
T Consensus         5 m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   83 (281)
T 3s55_A            5 MADFEGKTALITGGARGMGRSHAVALAEAGADIAIC-DRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDR   83 (281)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEE-eCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCH
Confidence            567899999999999999999999999999999885 665            6677777778877788999999999999


Q ss_pred             HHHHHHHHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcccc
Q 024338           89 ADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLV  168 (269)
Q Consensus        89 ~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~  168 (269)
                      ++++++++++.+.++++|+||||||+....++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..
T Consensus        84 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  163 (281)
T 3s55_A           84 AALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHS  163 (281)
T ss_dssp             HHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGS
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcC
Confidence            99999999999999999999999999888888999999999999999999999999999999888889999999999999


Q ss_pred             CCCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc------Ch--------HHHHHH-HhcCCCCC
Q 024338          169 GNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL------GE--------DLEKKI-LEKIPLGR  233 (269)
Q Consensus       169 ~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~------~~--------~~~~~~-~~~~~~~~  233 (269)
                      +.++...|++||+++++|+++++.|+++.||+||+|+||+++|++....      .+        ...... ......++
T Consensus       164 ~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (281)
T 3s55_A          164 ANFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQYAP  243 (281)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHHHHHHHCSSSCS
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHHHHHHhhhccCcC
Confidence            9999999999999999999999999999999999999999999986531      00        011111 11222378


Q ss_pred             CCCHHHHHHHHHHhccCCCCCCccccEEEecCCcc
Q 024338          234 YGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMV  268 (269)
Q Consensus       234 ~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg~~  268 (269)
                      +.+|+|+|++++||+ ++.++++|||+|.+|||+.
T Consensus       244 ~~~p~dvA~~v~~L~-s~~~~~itG~~i~vdgG~~  277 (281)
T 3s55_A          244 FLKPEEVTRAVLFLV-DEASSHITGTVLPIDAGAT  277 (281)
T ss_dssp             CBCHHHHHHHHHHHH-SGGGTTCCSCEEEESTTGG
T ss_pred             CCCHHHHHHHHHHHc-CCcccCCCCCEEEECCCcc
Confidence            889999999999999 5677899999999999986

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=2.7e-49  Score=336.21  Aligned_cols=247  Identities=29%  Similarity=0.477  Sum_probs=217.4

Q ss_pred             ccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecC-------------CHHHHHHHHHHHHHcCCcEEEEEccCC
Q 024338           20 AAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYAR-------------SSKEAEEVCKEIEASGGQALTFGGDVS   86 (269)
Q Consensus        20 ~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r-------------~~~~~~~~~~~l~~~~~~~~~~~~Dls   86 (269)
                      .+.++++|++|||||++|||+++|++|+++|++|+++ +|             +.+.++++.+++...+.++.++.+|++
T Consensus         9 ~~~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~   87 (280)
T 3pgx_A            9 QAGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIAC-DICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVR   87 (280)
T ss_dssp             --CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEE-ECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred             cccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE-eccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCC
Confidence            3567899999999999999999999999999999885 44             678888888888887889999999999


Q ss_pred             CHHHHHHHHHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCeEEEEcCCc
Q 024338           87 KEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK-KGRIINIASVV  165 (269)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~  165 (269)
                      |.++++++++++.++++++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|++++ .|+||++||..
T Consensus        88 ~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~  167 (280)
T 3pgx_A           88 DDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSA  167 (280)
T ss_dssp             CHHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGG
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchh
Confidence            99999999999999999999999999998888899999999999999999999999999999998765 78999999999


Q ss_pred             cccCCCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccCh-HHHH---H------HHhcCCCCCCC
Q 024338          166 GLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGE-DLEK---K------ILEKIPLGRYG  235 (269)
Q Consensus       166 ~~~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~-~~~~---~------~~~~~~~~~~~  235 (269)
                      +..+.++...|++||++++.|+++++.|+++.||+||+|+||+++|++...... ....   .      .....|. ++.
T Consensus       168 ~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-r~~  246 (280)
T 3pgx_A          168 GLKATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQPN-GFM  246 (280)
T ss_dssp             GTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGGGGGGSCCBTTBCS-SCB
T ss_pred             hccCCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCchhhhhhhhcccCCC-CCC
Confidence            999999999999999999999999999999999999999999999998653110 0000   0      0112233 577


Q ss_pred             CHHHHHHHHHHhccCCCCCCccccEEEecCCccC
Q 024338          236 QPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       236 ~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg~~~  269 (269)
                      +|+|+|++++||+ +++++++|||+|.+|||+++
T Consensus       247 ~p~dvA~~v~~L~-s~~~~~itG~~i~vdGG~~~  279 (280)
T 3pgx_A          247 TADEVADVVAWLA-GDGSGTLTGTQIPVDKGALK  279 (280)
T ss_dssp             CHHHHHHHHHHHH-SGGGTTCSSCEEEESTTGGG
T ss_pred             CHHHHHHHHHHHh-CccccCCCCCEEEECCCccC
Confidence            9999999999999 56788999999999999863

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=100.00  E-value=1.7e-48  Score=330.12  Aligned_cols=246  Identities=29%  Similarity=0.496  Sum_probs=218.9

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      .+++++|++|||||++|||++++++|+++|++|++ .+|+++.++++.+++.+.+.++.++.+|++|.++++++++++.+
T Consensus        16 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   94 (273)
T 1ae1_A           16 RWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYT-CSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAH   94 (273)
T ss_dssp             CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999888 58888888888888877777899999999999999999999999


Q ss_pred             hc-CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHh
Q 024338          101 AW-GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAA  179 (269)
Q Consensus       101 ~~-~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  179 (269)
                      .+ +++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.++...|++|
T Consensus        95 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~as  174 (273)
T 1ae1_A           95 VFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSAS  174 (273)
T ss_dssp             HTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             HcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCCCcchhHHH
Confidence            99 89999999999887778889999999999999999999999999999988778999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC------hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCC
Q 024338          180 KAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG------EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAA  253 (269)
Q Consensus       180 K~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~  253 (269)
                      |++++.|+++++.|+++.||+||+|+||+++|++.....      +...+......|++++.+|+|+|++++||+ ++++
T Consensus       175 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~-s~~~  253 (273)
T 1ae1_A          175 KGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLC-FPAA  253 (273)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHHHHHHHHHHHH-SGGG
T ss_pred             HHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh-Cccc
Confidence            999999999999999999999999999999999865432      233344556678899999999999999999 5677


Q ss_pred             CCccccEEEecCCcc
Q 024338          254 GYITGQVLTIDGGMV  268 (269)
Q Consensus       254 ~~~~G~~i~~dgg~~  268 (269)
                      ++++|++|.+|||+.
T Consensus       254 ~~~tG~~i~vdGG~~  268 (273)
T 1ae1_A          254 SYITGQIIWADGGFT  268 (273)
T ss_dssp             TTCCSCEEEESTTGG
T ss_pred             cCcCCCEEEECCCcc
Confidence            899999999999975

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=100.00  E-value=4.1e-49  Score=333.18  Aligned_cols=247  Identities=40%  Similarity=0.642  Sum_probs=221.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      ..+++|++|||||++|||+++|++|+++|++|+++..++.+..++..+++...+.++.++.+|++|.++++++++++.+.
T Consensus        21 ~~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  100 (269)
T 3gk3_A           21 SMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLAD  100 (269)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             hhhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            34689999999999999999999999999999987668888888888888777788999999999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKA  181 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  181 (269)
                      ++++|+||||||+....++.+.+.++|++.+++|+.+++.+++.++|.|.+++.++||++||..+..+.++...|++||+
T Consensus       101 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa  180 (269)
T 3gk3_A          101 FGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKA  180 (269)
T ss_dssp             HSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHHHH
T ss_pred             cCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCCCcchHHHHHH
Confidence            99999999999998888888999999999999999999999999999998888899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHH-HHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccE
Q 024338          182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEK-KILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQV  260 (269)
Q Consensus       182 al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~  260 (269)
                      +++.|+++++.|+++.||+|++|+||+++|++.+...+.... ......|.+++.+|+|+|++++||+ ++++.++|||+
T Consensus       181 a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~L~-s~~~~~itG~~  259 (269)
T 3gk3_A          181 GIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQDVLEAKILPQIPVGRLGRPDEVAALIAFLC-SDDAGFVTGAD  259 (269)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC-------CCSGGGCTTSSCBCHHHHHHHHHHHT-STTCTTCCSCE
T ss_pred             HHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhchhHHHHHhhhcCCcCCccCHHHHHHHHHHHh-CCCcCCeeCcE
Confidence            999999999999999999999999999999998766544443 4556778889999999999999999 55778999999


Q ss_pred             EEecCCccC
Q 024338          261 LTIDGGMVM  269 (269)
Q Consensus       261 i~~dgg~~~  269 (269)
                      |.+|||+.+
T Consensus       260 i~vdgG~~~  268 (269)
T 3gk3_A          260 LAINGGMHM  268 (269)
T ss_dssp             EEESTTSCC
T ss_pred             EEECCCEeC
Confidence            999999864

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=100.00  E-value=1.5e-49  Score=334.15  Aligned_cols=245  Identities=34%  Similarity=0.577  Sum_probs=208.5

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      ++++++|++|||||++|||+++|++|+++|++|+++.+++.+..++..+++...+.++.++.+|++|.++++++++++.+
T Consensus         3 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (259)
T 3edm_A            3 LQRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAAD   82 (259)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999998768888888888888887788899999999999999999999999


Q ss_pred             hcCCccEEEEccCCC-CCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccc-cCCCCChhhHH
Q 024338          101 AWGTVDILINNAGIT-RDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGL-VGNIGQANYSA  178 (269)
Q Consensus       101 ~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~-~~~~~~~~Y~~  178 (269)
                      +++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|.+  .|+||++||..+. .+.++...|++
T Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~~Y~a  160 (259)
T 3edm_A           83 KFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAK--GGAIVTFSSQAGRDGGGPGALAYAT  160 (259)
T ss_dssp             HHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHCCSTTCHHHHH
T ss_pred             HhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCEEEEEcCHHhccCCCCCcHHHHH
Confidence            999999999999987 5678889999999999999999999999999999854  6899999999998 78899999999


Q ss_pred             hHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC-hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCcc
Q 024338          179 AKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG-EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYIT  257 (269)
Q Consensus       179 sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~  257 (269)
                      ||+++++|+++++.|+++. |+||+|+||+++|++..... ++..+......|++++.+|+|+|++++||+ ++.++++|
T Consensus       161 sKaa~~~l~~~la~e~~~~-I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~-s~~~~~it  238 (259)
T 3edm_A          161 SKGAVMTFTRGLAKEVGPK-IRVNAVCPGMISTTFHDTFTKPEVRERVAGATSLKREGSSEDVAGLVAFLA-SDDAAYVT  238 (259)
T ss_dssp             HHHHHHHHHHHHHHHHTTT-CEEEEEEECCBCC----------------------CCBCHHHHHHHHHHHH-SGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHHCCC-CEEEEEEECCCcCcccccccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHc-CccccCcc
Confidence            9999999999999999886 99999999999999876553 334455566778899999999999999999 56778999


Q ss_pred             ccEEEecCCccC
Q 024338          258 GQVLTIDGGMVM  269 (269)
Q Consensus       258 G~~i~~dgg~~~  269 (269)
                      ||+|.+|||++.
T Consensus       239 G~~i~vdGg~~~  250 (259)
T 3edm_A          239 GACYDINGGVLF  250 (259)
T ss_dssp             SCEEEESBCSSB
T ss_pred             CCEEEECCCcCC
Confidence            999999999863

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.4e-49  Score=332.40  Aligned_cols=242  Identities=33%  Similarity=0.503  Sum_probs=199.2

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      ++++++|++|||||++|||+++|++|+++|++|+++ +|+.+..++..+++   +.++.++.+|++|.++++++++++.+
T Consensus         2 ~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~-~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~   77 (257)
T 3tpc_A            2 VMQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGL-DLKPPAGEEPAAEL---GAAVRFRNADVTNEADATAALAFAKQ   77 (257)
T ss_dssp             --CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEE-ESSCC---------------CEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEE-eCChHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHH
Confidence            577899999999999999999999999999999884 77777776666655   45788899999999999999999999


Q ss_pred             hcCCccEEEEccCCCCCCcc----cCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC------CCCeEEEEcCCccccCC
Q 024338          101 AWGTVDILINNAGITRDTLL----MRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKK------KKGRIINIASVVGLVGN  170 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~~~~iv~isS~~~~~~~  170 (269)
                      +++++|+||||||.....++    .+.+.++|++.+++|+.+++.++++++|.|.++      +.|+||++||..+..+.
T Consensus        78 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~  157 (257)
T 3tpc_A           78 EFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQ  157 (257)
T ss_dssp             HHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC
T ss_pred             HcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCC
Confidence            99999999999998765443    367899999999999999999999999999774      57899999999999999


Q ss_pred             CCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCC-CCCCCHHHHHHHHHHhcc
Q 024338          171 IGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPL-GRYGQPEEVAGLVEFLAL  249 (269)
Q Consensus       171 ~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~~~l~~  249 (269)
                      ++...|++||++++.|+++++.|++++||+||+|+||+++|++.....+...+......|+ +++.+|+|+|++++||++
T Consensus       158 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~r~~~~~dva~~v~~l~s  237 (257)
T 3tpc_A          158 IGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQDVQDALAASVPFPPRLGRAEEYAALVKHICE  237 (257)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC--------------CCSSSSCSCBCHHHHHHHHHHHHH
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHcc
Confidence            9999999999999999999999999999999999999999999877666666666677788 889999999999999995


Q ss_pred             CCCCCCccccEEEecCCccC
Q 024338          250 NPAAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       250 ~~~~~~~~G~~i~~dgg~~~  269 (269)
                      +   +++|||+|.+|||+.+
T Consensus       238 ~---~~itG~~i~vdGG~~~  254 (257)
T 3tpc_A          238 N---TMLNGEVIRLDGALRM  254 (257)
T ss_dssp             C---TTCCSCEEEESTTCCC
T ss_pred             c---CCcCCcEEEECCCccC
Confidence            4   5899999999999875

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=100.00  E-value=1.2e-49  Score=337.63  Aligned_cols=242  Identities=36%  Similarity=0.542  Sum_probs=214.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      +++++|++|||||++|||+++|++|+++|++|++ .+|+.+.++++.+++   +.++.++.+|++|.++++++++++.++
T Consensus        25 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~-~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~  100 (277)
T 3gvc_A           25 PDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLC-ADIDGDAADAAATKI---GCGAAACRVDVSDEQQIIAMVDACVAA  100 (277)
T ss_dssp             --CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEE-EESSHHHHHHHHHHH---CSSCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHc---CCcceEEEecCCCHHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999988 588888887777766   567889999999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKA  181 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  181 (269)
                      ++++|+||||||+....++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|++||+
T Consensus       101 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKa  180 (277)
T 3gvc_A          101 FGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKA  180 (277)
T ss_dssp             HSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCchhHHHHHH
Confidence            99999999999998888889999999999999999999999999999999888999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccCh----HHHHHHH---hcCCCCCCCCHHHHHHHHHHhccCCCCC
Q 024338          182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGE----DLEKKIL---EKIPLGRYGQPEEVAGLVEFLALNPAAG  254 (269)
Q Consensus       182 al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~----~~~~~~~---~~~~~~~~~~~~~~a~~~~~l~~~~~~~  254 (269)
                      +++.|+++++.|+++.||+||+|+||+++|++......    .......   ...|.+++.+|+|+|++++||+ +++++
T Consensus       181 a~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~-s~~a~  259 (277)
T 3gvc_A          181 GIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVFLL-SDDAS  259 (277)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC------CCHHHHHHHHHSSCBCHHHHHHHHHHHH-SGGGT
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhhHHHHhhhhhhhccccCCCCHHHHHHHHHHHc-CCccC
Confidence            99999999999999999999999999999997543211    1111111   1345677889999999999999 56778


Q ss_pred             CccccEEEecCCcc
Q 024338          255 YITGQVLTIDGGMV  268 (269)
Q Consensus       255 ~~~G~~i~~dgg~~  268 (269)
                      ++|||+|.+|||+.
T Consensus       260 ~itG~~i~vdGG~~  273 (277)
T 3gvc_A          260 MITGTTQIADGGTI  273 (277)
T ss_dssp             TCCSCEEEESTTGG
T ss_pred             CccCcEEEECCcch
Confidence            99999999999986

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=100.00  E-value=4.3e-49  Score=330.60  Aligned_cols=241  Identities=27%  Similarity=0.449  Sum_probs=217.0

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      +.+++||++|||||++|||+++|++|+++|++|++ .+|+++.++++.+++   +.++.++.+|++|.++++++++++.+
T Consensus         3 m~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~-~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~   78 (255)
T 4eso_A            3 MGNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLL-TGRNESNIARIREEF---GPRVHALRSDIADLNEIAVLGAAAGQ   78 (255)
T ss_dssp             -CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHH
Confidence            44689999999999999999999999999999988 588888888777766   46889999999999999999999999


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhH
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                      .++++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|++  .|+||++||..+..+.++...|++||
T Consensus        79 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asK  156 (255)
T 4eso_A           79 TLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIRE--GGSIVFTSSVADEGGHPGMSVYSASK  156 (255)
T ss_dssp             HHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCGGGSSBCTTBHHHHHHH
T ss_pred             HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc--CCEEEEECChhhcCCCCCchHHHHHH
Confidence            9999999999999988888999999999999999999999999999998844  58999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccc--cCh----HHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCC
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAK--LGE----DLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAG  254 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~--~~~----~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~  254 (269)
                      ++++.|+++++.|++++||+||+|+||+++|++...  ..+    ...+......|++++.+|+|+|++++||++ + ++
T Consensus       157 aa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s-~-~~  234 (255)
T 4eso_A          157 AALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTADEVARAVLFLAF-E-AT  234 (255)
T ss_dssp             HHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHH-T-CT
T ss_pred             HHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCCCCCCcCHHHHHHHHHHHcC-c-Cc
Confidence            999999999999999999999999999999998643  222    223344566899999999999999999995 4 77


Q ss_pred             CccccEEEecCCccC
Q 024338          255 YITGQVLTIDGGMVM  269 (269)
Q Consensus       255 ~~~G~~i~~dgg~~~  269 (269)
                      ++|||+|.+|||+..
T Consensus       235 ~itG~~i~vdGG~~~  249 (255)
T 4eso_A          235 FTTGAKLAVDGGLGQ  249 (255)
T ss_dssp             TCCSCEEEESTTTTT
T ss_pred             CccCCEEEECCCccc
Confidence            999999999999863

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=100.00  E-value=1.4e-48  Score=329.59  Aligned_cols=247  Identities=34%  Similarity=0.537  Sum_probs=220.2

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHc--CCcEEEEEccCCCHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS--GGQALTFGGDVSKEADVESMIKTA   98 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dls~~~~~~~~~~~~   98 (269)
                      .+++++|++|||||++|||++++++|+++|++|++ .+|+++.++++.+++.+.  +.++.++.+|++|.++++++++++
T Consensus         8 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   86 (267)
T 1iy8_A            8 TTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSL-VDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTAT   86 (267)
T ss_dssp             --CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence            45688999999999999999999999999999888 588888888888887665  667899999999999999999999


Q ss_pred             HHhcCCccEEEEccCCCCC-CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhH
Q 024338           99 VDAWGTVDILINNAGITRD-TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYS  177 (269)
Q Consensus        99 ~~~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~  177 (269)
                      .++++++|+||||||.... .++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.++...|+
T Consensus        87 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  166 (267)
T 1iy8_A           87 TERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYA  166 (267)
T ss_dssp             HHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHH
T ss_pred             HHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCCCCCccHH
Confidence            9999999999999998766 778889999999999999999999999999999887889999999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc----ChHHHH----HHHhcCCCCCCCCHHHHHHHHHHhcc
Q 024338          178 AAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL----GEDLEK----KILEKIPLGRYGQPEEVAGLVEFLAL  249 (269)
Q Consensus       178 ~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~----~~~~~~----~~~~~~~~~~~~~~~~~a~~~~~l~~  249 (269)
                      +||++++.|+++++.|+++.||+||+|+||+++|++....    .+...+    ......|++++.+|+|+|++++||+ 
T Consensus       167 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~l~-  245 (267)
T 1iy8_A          167 AAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLL-  245 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHT-
T ss_pred             HHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccCCCCCCcCHHHHHHHHHHHc-
Confidence            9999999999999999999999999999999999986432    111112    4455678888999999999999999 


Q ss_pred             CCCCCCccccEEEecCCccC
Q 024338          250 NPAAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       250 ~~~~~~~~G~~i~~dgg~~~  269 (269)
                      ++++++++|++|.+|||+.+
T Consensus       246 s~~~~~~tG~~i~vdGG~~~  265 (267)
T 1iy8_A          246 SDDASYVNATVVPIDGGQSA  265 (267)
T ss_dssp             SGGGTTCCSCEEEESTTTTT
T ss_pred             CccccCCCCCEEEECCCccc
Confidence            56677999999999999864

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=100.00  E-value=7.3e-50  Score=336.54  Aligned_cols=246  Identities=24%  Similarity=0.368  Sum_probs=211.2

Q ss_pred             ccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEe--cCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHH
Q 024338           20 AAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNY--ARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKT   97 (269)
Q Consensus        20 ~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~--~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~   97 (269)
                      .++++++|++|||||++|||+++|++|+++|++|+++.  .++.+.++++.++++..+.++.++.+|++|.+++++++++
T Consensus         5 ~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~   84 (262)
T 3ksu_A            5 KYHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDF   84 (262)
T ss_dssp             CCSCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence            45788999999999999999999999999999998853  2345677888888887788999999999999999999999


Q ss_pred             HHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhH
Q 024338           98 AVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYS  177 (269)
Q Consensus        98 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~  177 (269)
                      +.++++++|+||||||+....++.+.+.++|++.+++|+.+++.++++++|.|  ++.|+||++||..+..+.++...|+
T Consensus        85 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m--~~~g~iv~isS~~~~~~~~~~~~Y~  162 (262)
T 3ksu_A           85 AEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHM--NPNGHIITIATSLLAAYTGFYSTYA  162 (262)
T ss_dssp             HHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTE--EEEEEEEEECCCHHHHHHCCCCC--
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhh--cCCCEEEEEechhhccCCCCCchhH
Confidence            99999999999999999888889999999999999999999999999999998  4568999999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC-hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCc
Q 024338          178 AAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG-EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYI  256 (269)
Q Consensus       178 ~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~  256 (269)
                      +||+|+++|+++++.|+++.||+||+|+||+++|++..... +...+......|.+++.+|+|+|++++||+ ++ ++++
T Consensus       163 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~-s~-~~~i  240 (262)
T 3ksu_A          163 GNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQETKESTAFHKSQAMGNQLTKIEDIAPIIKFLT-TD-GWWI  240 (262)
T ss_dssp             ---CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC------------CCCCSCCGGGTHHHHHHHH-TT-TTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCchHHHHHHHhcCcccCCCCHHHHHHHHHHHc-CC-CCCc
Confidence            99999999999999999999999999999999999875533 233344556678889999999999999999 45 7899


Q ss_pred             cccEEEecCCccC
Q 024338          257 TGQVLTIDGGMVM  269 (269)
Q Consensus       257 ~G~~i~~dgg~~~  269 (269)
                      |||+|.+|||++.
T Consensus       241 tG~~i~vdGg~~~  253 (262)
T 3ksu_A          241 NGQTIFANGGYTT  253 (262)
T ss_dssp             CSCEEEESTTCCC
T ss_pred             cCCEEEECCCccC
Confidence            9999999999864

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=100.00  E-value=2.8e-48  Score=327.45  Aligned_cols=246  Identities=29%  Similarity=0.467  Sum_probs=215.0

Q ss_pred             cCCCCCCEEEEeCCC-CchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcC-CcEEEEEccCCCHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGAS-RGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASG-GQALTFGGDVSKEADVESMIKTA   98 (269)
Q Consensus        21 ~~~~~~k~vlItGas-~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dls~~~~~~~~~~~~   98 (269)
                      ++++++|++|||||+ +|||+++|++|+++|++|++ .+|+.+.+++..+++++.+ .++.++.+|++|.++++++++++
T Consensus        17 ~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   95 (266)
T 3o38_A           17 HGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVI-SDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQT   95 (266)
T ss_dssp             CSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEE-ecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHH
Confidence            467899999999998 59999999999999999888 5889988888888886654 68999999999999999999999


Q ss_pred             HHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCCeEEEEcCCccccCCCCChhhH
Q 024338           99 VDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKK-KKGRIINIASVVGLVGNIGQANYS  177 (269)
Q Consensus        99 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~iv~isS~~~~~~~~~~~~Y~  177 (269)
                      .++++++|+||||||+....++.+.+.++|++.+++|+.+++.+++.++|.|+++ +.++||++||..+..+.++...|+
T Consensus        96 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~  175 (266)
T 3o38_A           96 VEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYA  175 (266)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCTTCHHHH
T ss_pred             HHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCCCCchHH
Confidence            9999999999999999888888999999999999999999999999999999876 678999999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC-hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCc
Q 024338          178 AAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG-EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYI  256 (269)
Q Consensus       178 ~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~  256 (269)
                      +||++++.|+++++.|+++.||+|++|+||+++|++.+... +...+......+.+++.+|+|+|++++||+ ++++.++
T Consensus       176 ~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~~~dva~~i~~l~-s~~~~~~  254 (266)
T 3o38_A          176 AAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSSELLDRLASDEAFGRAAEPWEVAATIAFLA-SDYSSYM  254 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-----------------CCTTSSCCCHHHHHHHHHHHH-SGGGTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHc-CccccCc
Confidence            99999999999999999999999999999999999876543 334455666778899999999999999999 5567899


Q ss_pred             cccEEEecCCcc
Q 024338          257 TGQVLTIDGGMV  268 (269)
Q Consensus       257 ~G~~i~~dgg~~  268 (269)
                      |||+|.+|||+.
T Consensus       255 tG~~i~vdgG~~  266 (266)
T 3o38_A          255 TGEVVSVSSQRA  266 (266)
T ss_dssp             CSCEEEESSCCC
T ss_pred             cCCEEEEcCCcC
Confidence            999999999974

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=100.00  E-value=3.4e-48  Score=327.20  Aligned_cols=245  Identities=40%  Similarity=0.641  Sum_probs=225.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      .++.+|++|||||++|||+++|++|+++|++|+++..|+.+..++..+++.+.+.++.++.+|++|.++++++++++.+.
T Consensus        22 ~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  101 (267)
T 4iiu_A           22 SNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQ  101 (267)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            56789999999999999999999999999999887889999998999999888889999999999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hCCCCeEEEEcCCccccCCCCChhhHHhH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMM-KKKKGRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~-~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                      ++++|+||||||.....++.+.+.+++++.+++|+.+++.+++.+++.|. +++.++||++||..+..+.++...|++||
T Consensus       102 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  181 (267)
T 4iiu_A          102 HGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQVNYSAAK  181 (267)
T ss_dssp             HCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred             hCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCCCCchhHHHH
Confidence            99999999999998888888999999999999999999999999998886 56789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccE
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQV  260 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~  260 (269)
                      +|++.|+++++.|+++.||+|++|+||+++|++.... +..........|.+++.+|+|+|++++||+ ++++.++|||+
T Consensus       182 aa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~p~~~~~~~edva~~~~~L~-s~~~~~itG~~  259 (267)
T 4iiu_A          182 AGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME-ESALKEAMSMIPMKRMGQAEEVAGLASYLM-SDIAGYVTRQV  259 (267)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC-HHHHHHHHHTCTTCSCBCHHHHHHHHHHHH-SGGGTTCCSCE
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc-HHHHHHHHhcCCCCCCcCHHHHHHHHHHHh-CCcccCccCCE
Confidence            9999999999999999999999999999999987655 455566677889999999999999999999 56778999999


Q ss_pred             EEecCCcc
Q 024338          261 LTIDGGMV  268 (269)
Q Consensus       261 i~~dgg~~  268 (269)
                      |.+|||++
T Consensus       260 i~vdGG~~  267 (267)
T 4iiu_A          260 ISINGGML  267 (267)
T ss_dssp             EEESTTCC
T ss_pred             EEeCCCcC
Confidence            99999985

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=3e-48  Score=327.53  Aligned_cols=250  Identities=35%  Similarity=0.589  Sum_probs=221.6

Q ss_pred             ccccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHH-HHcCCcEEEEEccCCCHHHHHHHHH
Q 024338           18 NEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEI-EASGGQALTFGGDVSKEADVESMIK   96 (269)
Q Consensus        18 ~~~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l-~~~~~~~~~~~~Dls~~~~~~~~~~   96 (269)
                      .....++++|++|||||++|||+++++.|+++|++|++ ..|+.+.++++.+++ ...+.++.++.+|++|.++++++++
T Consensus        13 ~~~~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~   91 (267)
T 1vl8_A           13 MKEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVV-ASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLE   91 (267)
T ss_dssp             ----CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHH
Confidence            33446789999999999999999999999999999888 588888888877777 4446788899999999999999999


Q ss_pred             HHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCc-cccCCCCChh
Q 024338           97 TAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVV-GLVGNIGQAN  175 (269)
Q Consensus        97 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~-~~~~~~~~~~  175 (269)
                      ++.++++++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||.. +..+.++...
T Consensus        92 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~  171 (267)
T 1vl8_A           92 AVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISA  171 (267)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHH
T ss_pred             HHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCCCCChh
Confidence            999999999999999998877788899999999999999999999999999999887789999999999 8888899999


Q ss_pred             hHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC--hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCC
Q 024338          176 YSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG--EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAA  253 (269)
Q Consensus       176 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~  253 (269)
                      |++||++++.|+++++.|+++.||+||+|+||+++|++.....  +..........|++++.+|+|+|++++||+ ++++
T Consensus       172 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~-s~~~  250 (267)
T 1vl8_A          172 YAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLA-SEEA  250 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHH-SGGG
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccccccChHHHHHHHhhCCCCCCcCHHHHHHHHHHHc-Cccc
Confidence            9999999999999999999999999999999999999865432  333344556678888999999999999999 4567


Q ss_pred             CCccccEEEecCCccC
Q 024338          254 GYITGQVLTIDGGMVM  269 (269)
Q Consensus       254 ~~~~G~~i~~dgg~~~  269 (269)
                      ++++|++|.+|||+.+
T Consensus       251 ~~itG~~i~vdGG~~~  266 (267)
T 1vl8_A          251 KYVTGQIIFVDGGWTA  266 (267)
T ss_dssp             TTCCSCEEEESTTGGG
T ss_pred             cCCcCCeEEECCCCCC
Confidence            7999999999999863

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=100.00  E-value=1.4e-48  Score=329.50  Aligned_cols=244  Identities=32%  Similarity=0.496  Sum_probs=215.3

Q ss_pred             cccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHc--CCcEEEEEccCCCHHHHHHHHH
Q 024338           19 EAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS--GGQALTFGGDVSKEADVESMIK   96 (269)
Q Consensus        19 ~~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dls~~~~~~~~~~   96 (269)
                      .+.+++++|++|||||++|||+++|++|+++|++|++ .+|+.+.+++..+++...  +..+..+.+|++|.++++++++
T Consensus         3 ~m~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~   81 (267)
T 3t4x_A            3 AMHMQLKGKTALVTGSTAGIGKAIATSLVAEGANVLI-NGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIE   81 (267)
T ss_dssp             CCCCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEE-EESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHH
T ss_pred             ccccccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHH
Confidence            4567899999999999999999999999999999988 588998888888888765  4567889999999998877654


Q ss_pred             HHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhh
Q 024338           97 TAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANY  176 (269)
Q Consensus        97 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y  176 (269)
                          +++++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|
T Consensus        82 ----~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  157 (267)
T 3t4x_A           82 ----KYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQEMAHY  157 (267)
T ss_dssp             ----HCCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCTTCHHH
T ss_pred             ----hcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCCcchHH
Confidence                5789999999999988888899999999999999999999999999999998888999999999999999999999


Q ss_pred             HHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC-----------hHHHHHH----HhcCCCCCCCCHHHHH
Q 024338          177 SAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG-----------EDLEKKI----LEKIPLGRYGQPEEVA  241 (269)
Q Consensus       177 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~-----------~~~~~~~----~~~~~~~~~~~~~~~a  241 (269)
                      ++||++++.|+++++.|+++.||+||+|+||+++|++.....           ++..+..    ....|++++.+|+|+|
T Consensus       158 ~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA  237 (267)
T 3t4x_A          158 SATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPEEIA  237 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSSCSCBCTHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCcccccCccCHHHHH
Confidence            999999999999999999999999999999999999654221           1111111    2235678999999999


Q ss_pred             HHHHHhccCCCCCCccccEEEecCCcc
Q 024338          242 GLVEFLALNPAAGYITGQVLTIDGGMV  268 (269)
Q Consensus       242 ~~~~~l~~~~~~~~~~G~~i~~dgg~~  268 (269)
                      ++++||+ +++++++|||+|.+|||+.
T Consensus       238 ~~v~fL~-s~~~~~itG~~i~vdGG~~  263 (267)
T 3t4x_A          238 HLVTFLS-SPLSSAINGSALRIDGGLV  263 (267)
T ss_dssp             HHHHHHH-SGGGTTCCSCEEEESTTCS
T ss_pred             HHHHHHc-CccccCccCCeEEECCCcc
Confidence            9999999 5678899999999999986

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=100.00  E-value=1.6e-48  Score=328.29  Aligned_cols=243  Identities=30%  Similarity=0.525  Sum_probs=220.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      .++++|++|||||++|||++++++|+++|++|++ ..|+.+.++++.+++.+.+.++.++.+|++|.++++++++++.+.
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (262)
T 1zem_A            3 KKFNGKVCLVTGAGGNIGLATALRLAEEGTAIAL-LDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRD   81 (262)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999888 588888888888888776778999999999999999999999999


Q ss_pred             cCCccEEEEccCCC-CCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhH
Q 024338          102 WGTVDILINNAGIT-RDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       102 ~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                      ++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||..+..+.++...|++||
T Consensus        82 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  161 (262)
T 1zem_A           82 FGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSK  161 (262)
T ss_dssp             HSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHH
T ss_pred             hCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCCchHHHHH
Confidence            99999999999987 66778889999999999999999999999999999887789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc-------------C--hH-HHHHHHhcCCCCCCCCHHHHHHHH
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL-------------G--ED-LEKKILEKIPLGRYGQPEEVAGLV  244 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-------------~--~~-~~~~~~~~~~~~~~~~~~~~a~~~  244 (269)
                      ++++.|+++++.|+++.||+||+|+||+++|++....             .  ++ ..+......|++++.+|+|+|+++
T Consensus       162 ~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v  241 (262)
T 1zem_A          162 GAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVV  241 (262)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGGGSHHHH
T ss_pred             HHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            9999999999999999999999999999999986542             1  22 334445567889999999999999


Q ss_pred             HHhccCCCCCCccccEEEecCC
Q 024338          245 EFLALNPAAGYITGQVLTIDGG  266 (269)
Q Consensus       245 ~~l~~~~~~~~~~G~~i~~dgg  266 (269)
                      +||+ +++++++||++|.+|||
T Consensus       242 ~~l~-s~~~~~itG~~i~vdGG  262 (262)
T 1zem_A          242 AFLL-GDDSSFMTGVNLPIAGG  262 (262)
T ss_dssp             HHHH-SGGGTTCCSCEEEESCC
T ss_pred             HHHc-CchhcCcCCcEEecCCC
Confidence            9999 55678999999999998

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=100.00  E-value=4.6e-48  Score=330.35  Aligned_cols=246  Identities=29%  Similarity=0.433  Sum_probs=217.8

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHH-HcCCcEEEEEccCCCHH----------
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIE-ASGGQALTFGGDVSKEA----------   89 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~-~~~~~~~~~~~Dls~~~----------   89 (269)
                      ++++++|++|||||++|||+++++.|+++|++|+++..|+.+.++++.+++. ..+.++.++.+|++|.+          
T Consensus         4 m~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   83 (291)
T 1e7w_A            4 MTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGS   83 (291)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----C
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccc
Confidence            4568899999999999999999999999999998853288888888888886 45678999999999999          


Q ss_pred             -------HHHHHHHHHHHhcCCccEEEEccCCCCCCcccCCC--------------HHHHHHHHHHHhHHHHHHHHHHHH
Q 024338           90 -------DVESMIKTAVDAWGTVDILINNAGITRDTLLMRMK--------------KSQWQDVIDLNLTGVFLCTQAAAK  148 (269)
Q Consensus        90 -------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~l~~~~~~  148 (269)
                             +++++++++.+.++++|+||||||+....++.+.+              .++|++.+++|+.+++.++++++|
T Consensus        84 ~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  163 (291)
T 1e7w_A           84 APVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAH  163 (291)
T ss_dssp             CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             cccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHH
Confidence                   99999999999999999999999988777778888              899999999999999999999999


Q ss_pred             HHHhCC------CCeEEEEcCCccccCCCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHH
Q 024338          149 IMMKKK------KGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLE  222 (269)
Q Consensus       149 ~l~~~~------~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~  222 (269)
                      .|.+++      .++||++||..+..+.++...|++||++++.|+++++.|+++.||+||+|+||+++|++ . ..+...
T Consensus       164 ~m~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~-~~~~~~  241 (291)
T 1e7w_A          164 RVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D-MPPAVW  241 (291)
T ss_dssp             HHHTSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-G-SCHHHH
T ss_pred             HHHhcCCCCCCCCcEEEEEechhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-c-CCHHHH
Confidence            998776      79999999999999999999999999999999999999999999999999999999998 5 434444


Q ss_pred             HHHHhcCCCC-CCCCHHHHHHHHHHhccCCCCCCccccEEEecCCccC
Q 024338          223 KKILEKIPLG-RYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       223 ~~~~~~~~~~-~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg~~~  269 (269)
                      +......|++ ++.+|+|+|++++||+ ++.++++||++|.+|||+.+
T Consensus       242 ~~~~~~~p~~~r~~~pedvA~~v~~l~-s~~~~~itG~~i~vdGG~~~  288 (291)
T 1e7w_A          242 EGHRSKVPLYQRDSSAAEVSDVVIFLC-SSKAKYITGTCVKVDGGYSL  288 (291)
T ss_dssp             HHHHTTCTTTTSCBCHHHHHHHHHHHH-SGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHHh-CCcccCccCcEEEECCCccc
Confidence            5555667888 8899999999999999 56778999999999999863

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=100.00  E-value=7.7e-48  Score=324.27  Aligned_cols=247  Identities=28%  Similarity=0.466  Sum_probs=220.7

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHc-CCcEEEEEccCCCHHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS-GGQALTFGGDVSKEADVESMIKTAV   99 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dls~~~~~~~~~~~~~   99 (269)
                      .+++++|++|||||++|||++++++|+++|++|++ .+|+.+.++++.+++... +.++.++.+|++|.++++++++++.
T Consensus         2 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   80 (263)
T 3ai3_A            2 DMGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVL-VARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVR   80 (263)
T ss_dssp             CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEE-EcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            35688999999999999999999999999999888 478888888888877665 6788999999999999999999999


Q ss_pred             HhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHh
Q 024338          100 DAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAA  179 (269)
Q Consensus       100 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  179 (269)
                      +.++++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.++...|++|
T Consensus        81 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  160 (263)
T 3ai3_A           81 SSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVT  160 (263)
T ss_dssp             HHHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCcchHHHH
Confidence            99999999999999887778889999999999999999999999999999987778999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC-----------hHHHHHHHhc-CCCCCCCCHHHHHHHHHHh
Q 024338          180 KAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG-----------EDLEKKILEK-IPLGRYGQPEEVAGLVEFL  247 (269)
Q Consensus       180 K~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~-----------~~~~~~~~~~-~~~~~~~~~~~~a~~~~~l  247 (269)
                      |++++.|+++++.|+++.||+||+|+||+++|++.....           +...+..... .|.+++.+|+|+|++++||
T Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l  240 (263)
T 3ai3_A          161 KAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANFFVFL  240 (263)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHCTTCSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCCCCCCCcCHHHHHHHHHHH
Confidence            999999999999999999999999999999999754321           1222333344 7888999999999999999


Q ss_pred             ccCCCCCCccccEEEecCCccC
Q 024338          248 ALNPAAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       248 ~~~~~~~~~~G~~i~~dgg~~~  269 (269)
                      + ++++++++|++|.+|||+.+
T Consensus       241 ~-s~~~~~~~G~~~~vdgG~~~  261 (263)
T 3ai3_A          241 C-SERATYSVGSAYFVDGGMLK  261 (263)
T ss_dssp             T-STTCTTCCSCEEEESTTCCC
T ss_pred             c-CccccCCCCcEEEECCCccc
Confidence            9 45677999999999999753

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=9.8e-48  Score=320.47  Aligned_cols=240  Identities=40%  Similarity=0.619  Sum_probs=215.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      |++++|++|||||++|||++++++|+++|++|++ ..|+.+.++++.+++   +  +.++.+|++|.++++++++++.+.
T Consensus         1 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~-~~r~~~~~~~~~~~~---~--~~~~~~D~~~~~~~~~~~~~~~~~   74 (245)
T 1uls_A            1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVA-CDIEEGPLREAAEAV---G--AHPVVMDVADPASVERGFAEALAH   74 (245)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHTT---T--CEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHc---C--CEEEEecCCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999988 478887776665543   2  678899999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKA  181 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  181 (269)
                      ++++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||.. ..+.++...|++||+
T Consensus        75 ~g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~~~~~~~~Y~asK~  153 (245)
T 1uls_A           75 LGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLGNLGQANYAASMA  153 (245)
T ss_dssp             HSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGCCTTCHHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hcCCCCchhHHHHHH
Confidence            9999999999998877788899999999999999999999999999999887889999999998 888899999999999


Q ss_pred             HHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEE
Q 024338          182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL  261 (269)
Q Consensus       182 al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i  261 (269)
                      +++.|+++++.|+++.||+||+|+||+++|++.....+...+......|.+++.+|+|+|++++||+ ++++.+++|++|
T Consensus       154 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~-s~~~~~~tG~~~  232 (245)
T 1uls_A          154 GVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVREKAIAATPLGRAGKPLEVAYAALFLL-SDESSFITGQVL  232 (245)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHH-SGGGTTCCSCEE
T ss_pred             HHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhcCHHHHHHHHhhCCCCCCcCHHHHHHHHHHHh-CchhcCCcCCEE
Confidence            9999999999999999999999999999999876655544455556678888999999999999999 456779999999


Q ss_pred             EecCCccC
Q 024338          262 TIDGGMVM  269 (269)
Q Consensus       262 ~~dgg~~~  269 (269)
                      .+|||+.+
T Consensus       233 ~vdgG~~~  240 (245)
T 1uls_A          233 FVDGGRTI  240 (245)
T ss_dssp             EESTTTTT
T ss_pred             EECCCccc
Confidence            99999863

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=100.00  E-value=5.9e-48  Score=324.52  Aligned_cols=244  Identities=34%  Similarity=0.526  Sum_probs=206.5

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      +|++++|++|||||++|||+++|++|+++|++|++ .+|+.+.++++.+++   +.++.++.+|++|.++++++++++.+
T Consensus         4 ~m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~-~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (261)
T 3n74_A            4 SMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVI-VDRDKAGAERVAGEI---GDAALAVAADISKEADVDAAVEAALS   79 (261)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHH---CTTEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEE-EcCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999888 589988888777765   56889999999999999999999999


Q ss_pred             hcCCccEEEEccCCCC-CCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC----CCeEEEEcCCccccCCCCChh
Q 024338          101 AWGTVDILINNAGITR-DTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK----KGRIINIASVVGLVGNIGQAN  175 (269)
Q Consensus       101 ~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~----~~~iv~isS~~~~~~~~~~~~  175 (269)
                      +++++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|.|.+++    .++||++||..+..+.++...
T Consensus        80 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~  159 (261)
T 3n74_A           80 KFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAW  159 (261)
T ss_dssp             HHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCTTCHH
T ss_pred             hcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCCCccH
Confidence            9999999999999875 56778889999999999999999999999999997653    678999999999999999999


Q ss_pred             hHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC----hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCC
Q 024338          176 YSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG----EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNP  251 (269)
Q Consensus       176 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~  251 (269)
                      |++||++++.|+++++.|+++.||+|++|+||+++|++.....    +...+.+....|.+++.+|+|+|++++||+ ++
T Consensus       160 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~-s~  238 (261)
T 3n74_A          160 YNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEAAAFLC-SP  238 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------CTTSSCCCHHHHHHHHHHHT-SG
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHHHHHhhcCCcCCCcCHHHHHHHHHHHc-CC
Confidence            9999999999999999999999999999999999999876542    233445566788899999999999999999 56


Q ss_pred             CCCCccccEEEecCCccC
Q 024338          252 AAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       252 ~~~~~~G~~i~~dgg~~~  269 (269)
                      ++.++|||+|.+|||+.+
T Consensus       239 ~~~~itG~~i~vdgG~~~  256 (261)
T 3n74_A          239 QASMITGVALDVDGGRSI  256 (261)
T ss_dssp             GGTTCCSCEEEESTTTTC
T ss_pred             cccCcCCcEEEecCCccc
Confidence            778999999999999874

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=4.8e-48  Score=327.78  Aligned_cols=246  Identities=36%  Similarity=0.588  Sum_probs=219.2

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      .+++++|++|||||++|||++++++|+++|++|++ .+|+.+.++++.+++...+ ++.++.+|++|.++++++++++.+
T Consensus        24 ~~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~-~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~  101 (276)
T 2b4q_A           24 YFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFI-CARDAEACADTATRLSAYG-DCQAIPADLSSEAGARRLAQALGE  101 (276)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE-ECSCHHHHHHHHHHHTTSS-CEEECCCCTTSHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHHhcC-ceEEEEeeCCCHHHHHHHHHHHHH
Confidence            36789999999999999999999999999999888 5888888888887776544 788899999999999999999999


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC----CeEEEEcCCccccCCCCCh-h
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKK----GRIINIASVVGLVGNIGQA-N  175 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~----~~iv~isS~~~~~~~~~~~-~  175 (269)
                      .++++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|++++.    ++||++||..+..+.++.. .
T Consensus       102 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~~~~~~  181 (276)
T 2b4q_A          102 LSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYA  181 (276)
T ss_dssp             HCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCCCSCTT
T ss_pred             hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCCCCccc
Confidence            9999999999999887778888999999999999999999999999999977665    8999999999999988888 9


Q ss_pred             hHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHh--cCCCCCCCCHHHHHHHHHHhccCCCC
Q 024338          176 YSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILE--KIPLGRYGQPEEVAGLVEFLALNPAA  253 (269)
Q Consensus       176 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~~l~~~~~~  253 (269)
                      |++||++++.|+++++.|+++.||+||+|+||+++|++.....+...+....  ..|++++.+|+|+|++++||+ ++.+
T Consensus       182 Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~-s~~~  260 (276)
T 2b4q_A          182 YGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIANDPQALEADSASIPMGRWGRPEEMAALAISLA-GTAG  260 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHHHCHHHHHHHHHTSTTSSCCCHHHHHHHHHHHH-SGGG
T ss_pred             cHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcchhHHHHHHhhcCCCCCCcCCHHHHHHHHHHHh-Cccc
Confidence            9999999999999999999999999999999999999865432222233344  678889999999999999999 4567


Q ss_pred             CCccccEEEecCCccC
Q 024338          254 GYITGQVLTIDGGMVM  269 (269)
Q Consensus       254 ~~~~G~~i~~dgg~~~  269 (269)
                      ++++|++|.+|||+.+
T Consensus       261 ~~~tG~~i~vdGG~~L  276 (276)
T 2b4q_A          261 AYMTGNVIPIDGGFHL  276 (276)
T ss_dssp             TTCCSCEEEESTTTTC
T ss_pred             cCCCCCEEEeCCCccC
Confidence            7999999999999875

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=100.00  E-value=3e-48  Score=326.86  Aligned_cols=247  Identities=29%  Similarity=0.461  Sum_probs=213.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      +++.+|++|||||++|||++++++|+++|++|+++.+++.+..+.+.+.+...+.++.++.+|++|.++++++++++.+.
T Consensus         3 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   82 (264)
T 3i4f_A            3 LGRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSH   82 (264)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            45678999999999999999999999999999987677777777777766666778999999999999999999999999


Q ss_pred             cCCccEEEEccC--CCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCC-cc-ccCCCCChhhH
Q 024338          102 WGTVDILINNAG--ITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASV-VG-LVGNIGQANYS  177 (269)
Q Consensus       102 ~~~id~li~~ag--~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~-~~-~~~~~~~~~Y~  177 (269)
                      ++++|+||||||  .....++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||. .+ ..+.++...|+
T Consensus        83 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~Y~  162 (264)
T 3i4f_A           83 FGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFA  162 (264)
T ss_dssp             HSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCCCTTCHHHH
T ss_pred             hCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCCCCCCchhH
Confidence            999999999999  445567888999999999999999999999999999988888999999998 44 56777889999


Q ss_pred             HhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCcc
Q 024338          178 AAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYIT  257 (269)
Q Consensus       178 ~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~  257 (269)
                      +||++++.|+++++.|+++.||+|++|+||+++|++.....+...+......|++++.+|+|+|++++||+ ++.+.++|
T Consensus       163 asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~-s~~~~~it  241 (264)
T 3i4f_A          163 AAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQEARQLKEHNTPIGRSGTGEDIARTISFLC-EDDSDMIT  241 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCHHHHHHC--------CCCCHHHHHHHHHHHH-SGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhccHHHHHHHhhcCCCCCCcCHHHHHHHHHHHc-CcccCCCC
Confidence            99999999999999999999999999999999999987766665555566778899999999999999999 55677999


Q ss_pred             ccEEEecCCccC
Q 024338          258 GQVLTIDGGMVM  269 (269)
Q Consensus       258 G~~i~~dgg~~~  269 (269)
                      ||+|.+|||+..
T Consensus       242 G~~i~vdGG~~~  253 (264)
T 3i4f_A          242 GTIIEVTGAVDV  253 (264)
T ss_dssp             SCEEEESCSCCC
T ss_pred             CcEEEEcCceee
Confidence            999999999863

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=100.00  E-value=7.4e-48  Score=323.18  Aligned_cols=242  Identities=38%  Similarity=0.559  Sum_probs=218.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTV  105 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i  105 (269)
                      +|++|||||++|||++++++|+++|++|++ .+|+.+.++++.+++...+.++.++.+|++|.++++++++++.+.++++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   80 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAI-ADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGF   80 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            689999999999999999999999999888 4888888888888887767789999999999999999999999999999


Q ss_pred             cEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCeEEEEcCCccccCCCCChhhHHhHHHHH
Q 024338          106 DILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK-KGRIINIASVVGLVGNIGQANYSAAKAGVI  184 (269)
Q Consensus       106 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK~al~  184 (269)
                      |+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|.+++ .++||++||..+..+.++...|++||++++
T Consensus        81 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~  160 (256)
T 1geg_A           81 DVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVR  160 (256)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCchhHHHHHHHHH
Confidence            9999999988777888999999999999999999999999999998766 789999999999999999999999999999


Q ss_pred             HHHHHHHHHhccCCeEEEEEecCCccCCccccc-----------ChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCC
Q 024338          185 GLTKTVAKEYASRNINVNAIAPGFIASDMTAKL-----------GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAA  253 (269)
Q Consensus       185 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~  253 (269)
                      .|+++++.|+++.||+||+|+||+++|++....           .+...+.+....|.+++.+|+|+|++++||+ ++.+
T Consensus       161 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~-s~~~  239 (256)
T 1geg_A          161 GLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLA-SPDS  239 (256)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHHH-SGGG
T ss_pred             HHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh-Cccc
Confidence            999999999999999999999999999976432           1222334455678888999999999999999 5567


Q ss_pred             CCccccEEEecCCccC
Q 024338          254 GYITGQVLTIDGGMVM  269 (269)
Q Consensus       254 ~~~~G~~i~~dgg~~~  269 (269)
                      ++++|++|.+|||+.+
T Consensus       240 ~~~tG~~i~vdGG~~~  255 (256)
T 1geg_A          240 DYMTGQSLLIDGGMVF  255 (256)
T ss_dssp             TTCCSCEEEESSSSSC
T ss_pred             cCCCCCEEEeCCCccC
Confidence            7999999999999864

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=6.6e-48  Score=333.08  Aligned_cols=246  Identities=30%  Similarity=0.563  Sum_probs=216.2

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCC------------HHHHHHHHHHHHHcCCcEEEEEccCCCH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARS------------SKEAEEVCKEIEASGGQALTFGGDVSKE   88 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~------------~~~~~~~~~~l~~~~~~~~~~~~Dls~~   88 (269)
                      +.+++||++|||||++|||+++|+.|+++|++|+++ +++            .+.+++..+++...+.++.++.+|++|.
T Consensus        41 m~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~  119 (317)
T 3oec_A           41 MNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAI-DLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDL  119 (317)
T ss_dssp             -CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEE-ECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEE-ecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCH
Confidence            456899999999999999999999999999999885 443            6777788888887788999999999999


Q ss_pred             HHHHHHHHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCeEEEEcCCccc
Q 024338           89 ADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK-KGRIINIASVVGL  167 (269)
Q Consensus        89 ~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~  167 (269)
                      ++++++++++.+.++++|+||||||+....++.+.+.++|++.+++|+.+++.++++++|.|.+++ .|+||++||..+.
T Consensus       120 ~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~  199 (317)
T 3oec_A          120 ASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGL  199 (317)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGS
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhc
Confidence            999999999999999999999999998888889999999999999999999999999999998765 6899999999999


Q ss_pred             cCCCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc-------------ChHHHHHH---HhcCCC
Q 024338          168 VGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL-------------GEDLEKKI---LEKIPL  231 (269)
Q Consensus       168 ~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-------------~~~~~~~~---~~~~~~  231 (269)
                      .+.++...|++||++++.|+++++.|+++.||+||+|+||+++|++....             ........   ....| 
T Consensus       200 ~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-  278 (317)
T 3oec_A          200 RGAPGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLTLLP-  278 (317)
T ss_dssp             SCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSCCHHHHHHHHTTTCSSS-
T ss_pred             CCCCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhccccchhHHHHHHhhhccCC-
Confidence            99999999999999999999999999999999999999999999975321             01111111   11223 


Q ss_pred             CCCCCHHHHHHHHHHhccCCCCCCccccEEEecCCccC
Q 024338          232 GRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       232 ~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg~~~  269 (269)
                      +++.+|+|+|++++||+ +++++++|||+|.+|||+++
T Consensus       279 ~~~~~pedvA~av~fL~-s~~a~~itG~~i~vdGG~~~  315 (317)
T 3oec_A          279 IPWVEPEDVSNAVAWLA-SDEARYIHGAAIPVDGGQLA  315 (317)
T ss_dssp             SSSBCHHHHHHHHHHHT-SGGGTTCCSCEEEESTTGGG
T ss_pred             CCCCCHHHHHHHHHHHc-CCcccCCCCCEEEECcchhh
Confidence            66779999999999999 56788999999999999864

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=100.00  E-value=5.4e-48  Score=324.76  Aligned_cols=244  Identities=39%  Similarity=0.593  Sum_probs=212.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHH-HHHHHHHHHHc-CCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKE-AEEVCKEIEAS-GGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~-~~~~~~~l~~~-~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      +++|++|||||++|||+++++.|+++|++|+++ .|+.+. ++++.+++.+. +.++.++.+|++|.++++++++++.+.
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   80 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLN-GFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQ   80 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEE-CCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEE-eCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence            578999999999999999999999999999884 777666 77777777654 667889999999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKA  181 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  181 (269)
                      ++++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.++...|++||+
T Consensus        81 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  160 (260)
T 1x1t_A           81 MGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKH  160 (260)
T ss_dssp             HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCCCCchHHHHHH
Confidence            99999999999987777888899999999999999999999999999998877899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccCh-----------HHHHHH-HhcCCCCCCCCHHHHHHHHHHhcc
Q 024338          182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGE-----------DLEKKI-LEKIPLGRYGQPEEVAGLVEFLAL  249 (269)
Q Consensus       182 al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~-----------~~~~~~-~~~~~~~~~~~~~~~a~~~~~l~~  249 (269)
                      +++.|+++++.|+++.||+||+|+||+++|++.....+           +..+.. ....|.+++.+|+|+|++++||+ 
T Consensus       161 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~~~l~-  239 (260)
T 1x1t_A          161 GVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLA-  239 (260)
T ss_dssp             HHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHHHHHHHHHHH-
T ss_pred             HHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhccCCCCCCcCHHHHHHHHHHHh-
Confidence            99999999999999999999999999999998654321           111222 44568888999999999999999 


Q ss_pred             CCCCCCccccEEEecCCccC
Q 024338          250 NPAAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       250 ~~~~~~~~G~~i~~dgg~~~  269 (269)
                      ++.+++++|++|.+|||+.+
T Consensus       240 s~~~~~~tG~~~~vdgG~~~  259 (260)
T 1x1t_A          240 SDAAAQITGTTVSVDGGWTA  259 (260)
T ss_dssp             SGGGTTCCSCEEEESTTGGG
T ss_pred             ChhhcCCCCCEEEECCCccC
Confidence            55677999999999999863

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=100.00  E-value=5.4e-48  Score=324.74  Aligned_cols=245  Identities=31%  Similarity=0.505  Sum_probs=215.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHc--CCcEEEEEccCCCHHHHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS--GGQALTFGGDVSKEADVESMIKTAV   99 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dls~~~~~~~~~~~~~   99 (269)
                      +++++|++|||||++|||++++++|+++|++|++ .+|+++.++++.+++...  +.++.++.+|++|.++++++++++.
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (260)
T 2z1n_A            3 LGIQGKLAVVTAGSSGLGFASALELARNGARLLL-FSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKAR   81 (260)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHH
Confidence            5688999999999999999999999999999888 588888888888777653  3378899999999999999999999


Q ss_pred             HhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHh
Q 024338          100 DAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAA  179 (269)
Q Consensus       100 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  179 (269)
                      +.++ +|+||||||.....++.+.+.++|++.+++|+.+++.+++.++|.|.+++.++||++||..+..+.++...|++|
T Consensus        82 ~~~g-id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  160 (260)
T 2z1n_A           82 DLGG-ADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIM  160 (260)
T ss_dssp             HTTC-CSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             HhcC-CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCchhHHH
Confidence            9998 999999999877778889999999999999999999999999999988788999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccc----------ccChHH-HHHHHhcCCCCCCCCHHHHHHHHHHhc
Q 024338          180 KAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTA----------KLGEDL-EKKILEKIPLGRYGQPEEVAGLVEFLA  248 (269)
Q Consensus       180 K~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~----------~~~~~~-~~~~~~~~~~~~~~~~~~~a~~~~~l~  248 (269)
                      |++++.|+++++.|+++.||+||+|+||+++|++..          ...+.. ........|++++.+|+|+|++++||+
T Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~  240 (260)
T 2z1n_A          161 RLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELASVVAFLA  240 (260)
T ss_dssp             THHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------------CCTTSSCCCHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhcCCCCCccCHHHHHHHHHHHh
Confidence            999999999999999999999999999999999865          222221 233445568888999999999999999


Q ss_pred             cCCCCCCccccEEEecCCccC
Q 024338          249 LNPAAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       249 ~~~~~~~~~G~~i~~dgg~~~  269 (269)
                       ++.+++++|++|.+|||+.+
T Consensus       241 -s~~~~~~tG~~i~vdGG~~~  260 (260)
T 2z1n_A          241 -SEKASFITGAVIPVDGGAHI  260 (260)
T ss_dssp             -SGGGTTCCSCEEEESTTTTC
T ss_pred             -CccccCCCCCEEEeCCCccC
Confidence             55677999999999999875

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=100.00  E-value=5.8e-48  Score=324.20  Aligned_cols=242  Identities=37%  Similarity=0.563  Sum_probs=217.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHH--HHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKE--AEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~--~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      +|++|||||++|||++++++|+++|++|+++ +|+.+.  ++++.++++..+.++.++.+|++|.++++++++++.+.++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   80 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVA-DLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLG   80 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEE-ECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE-eCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            7999999999999999999999999998884 777766  7777778876677899999999999999999999999999


Q ss_pred             CccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC-CeEEEEcCCccccCCCCChhhHHhHHH
Q 024338          104 TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKK-GRIINIASVVGLVGNIGQANYSAAKAG  182 (269)
Q Consensus       104 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-~~iv~isS~~~~~~~~~~~~Y~~sK~a  182 (269)
                      ++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|++++. ++||++||..+..+.++...|++||++
T Consensus        81 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  160 (258)
T 3a28_C           81 GFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFA  160 (258)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCCCchhHHHHHHH
Confidence            9999999999887778889999999999999999999999999999987766 999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhccCCeEEEEEecCCccCCccccc---------C--hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCC
Q 024338          183 VIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL---------G--EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNP  251 (269)
Q Consensus       183 l~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~---------~--~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~  251 (269)
                      ++.|+++++.|+++.||+||+|+||+++|++....         .  +...+......|++++.+|+|+|++++||+ ++
T Consensus       161 ~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~-s~  239 (258)
T 3a28_C          161 VRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLVSFLA-SE  239 (258)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTTCTTSSCBCHHHHHHHHHHHH-SG
T ss_pred             HHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHhcCCCCCccCHHHHHHHHHHHh-Cc
Confidence            99999999999999999999999999999986531         1  223344455678888999999999999999 56


Q ss_pred             CCCCccccEEEecCCccC
Q 024338          252 AAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       252 ~~~~~~G~~i~~dgg~~~  269 (269)
                      .+++++|++|.+|||+.+
T Consensus       240 ~~~~~tG~~i~vdGG~~~  257 (258)
T 3a28_C          240 NSNYVTGQVMLVDGGMLY  257 (258)
T ss_dssp             GGTTCCSCEEEESSSSCC
T ss_pred             ccCCCCCCEEEECCCEec
Confidence            678999999999999864

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=100.00  E-value=1.5e-47  Score=321.95  Aligned_cols=245  Identities=30%  Similarity=0.503  Sum_probs=221.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      +++++|++|||||++|||++++++|+++|++|++ .+|+++.++++.+++...+.++.++.+|++|.++++++++++.+.
T Consensus         5 ~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (260)
T 2ae2_A            5 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYT-CSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANH   83 (260)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            5688999999999999999999999999999888 588888888888888776778999999999999999999999999


Q ss_pred             c-CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhH
Q 024338          102 W-GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       102 ~-~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                      + +++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.++...|++||
T Consensus        84 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  163 (260)
T 2ae2_A           84 FHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATK  163 (260)
T ss_dssp             TTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             cCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCcchHHHHH
Confidence            9 899999999998877788889999999999999999999999999999888889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC--hHHHH---HHHhcCCCCCCCCHHHHHHHHHHhccCCCCCC
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG--EDLEK---KILEKIPLGRYGQPEEVAGLVEFLALNPAAGY  255 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~--~~~~~---~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~  255 (269)
                      ++++.|+++++.|+++.||+||+|+||+++|++.....  +...+   ......|.+++.+|+|+|++++||+ ++.+++
T Consensus       164 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~-s~~~~~  242 (260)
T 2ae2_A          164 GAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLC-FPAASY  242 (260)
T ss_dssp             HHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHHHHH-SGGGTT
T ss_pred             HHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcCCCCCCCCHHHHHHHHHHHc-CccccC
Confidence            99999999999999999999999999999999765322  22222   4455678888999999999999999 556779


Q ss_pred             ccccEEEecCCcc
Q 024338          256 ITGQVLTIDGGMV  268 (269)
Q Consensus       256 ~~G~~i~~dgg~~  268 (269)
                      ++|++|.+|||+.
T Consensus       243 ~tG~~~~vdgG~~  255 (260)
T 2ae2_A          243 VTGQIIYVDGGLM  255 (260)
T ss_dssp             CCSCEEEESTTGG
T ss_pred             CCCCEEEECCCcc
Confidence            9999999999975

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=100.00  E-value=5.5e-48  Score=325.74  Aligned_cols=247  Identities=32%  Similarity=0.547  Sum_probs=223.7

Q ss_pred             cCCCCCCEEEEeCCC--CchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHH-cCCcEEEEEccCCCHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGAS--RGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEA-SGGQALTFGGDVSKEADVESMIKT   97 (269)
Q Consensus        21 ~~~~~~k~vlItGas--~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dls~~~~~~~~~~~   97 (269)
                      .+++++|++|||||+  +|||+++|++|+++|++|+++..++.+..++..+++.+ .+.++.++.+|++|.+++++++++
T Consensus        15 ~~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~   94 (267)
T 3gdg_A           15 QLSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKD   94 (267)
T ss_dssp             HHCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHH
T ss_pred             ccCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHH
Confidence            467899999999999  99999999999999999998645544444566666654 377899999999999999999999


Q ss_pred             HHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCC--CCChh
Q 024338           98 AVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGN--IGQAN  175 (269)
Q Consensus        98 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~--~~~~~  175 (269)
                      +.+.++++|+||||||+....++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.  ++...
T Consensus        95 ~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  174 (267)
T 3gdg_A           95 VVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTS  174 (267)
T ss_dssp             HHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCSSSCCHH
T ss_pred             HHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCCCCCCCc
Confidence            9999999999999999988888889999999999999999999999999999988888999999999998776  57899


Q ss_pred             hHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCC
Q 024338          176 YSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGY  255 (269)
Q Consensus       176 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~  255 (269)
                      |++||++++.|+++++.|+++. |+||+|+||+++|++.+...+...+......|.+++.+|+|+|++++||+ ++++++
T Consensus       175 Y~~sK~a~~~~~~~la~e~~~~-i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~r~~~~~dva~~~~~l~-s~~~~~  252 (267)
T 3gdg_A          175 YNVAKAGCIHMARSLANEWRDF-ARVNSISPGYIDTGLSDFVPKETQQLWHSMIPMGRDGLAKELKGAYVYFA-SDASTY  252 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTT-CEEEEEEECCEECSCGGGSCHHHHHHHHTTSTTSSCEETHHHHHHHHHHH-STTCTT
T ss_pred             chHHHHHHHHHHHHHHHHhccC-cEEEEEECCccccchhhhCCHHHHHHHHhcCCCCCCcCHHHHHhHhheee-cCcccc
Confidence            9999999999999999999887 99999999999999988777777777788899999999999999999999 567789


Q ss_pred             ccccEEEecCCccC
Q 024338          256 ITGQVLTIDGGMVM  269 (269)
Q Consensus       256 ~~G~~i~~dgg~~~  269 (269)
                      +|||+|.+|||+++
T Consensus       253 itG~~i~vdgG~~~  266 (267)
T 3gdg_A          253 TTGADLLIDGGYTT  266 (267)
T ss_dssp             CCSCEEEESTTGGG
T ss_pred             ccCCEEEECCceec
Confidence            99999999999874

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=100.00  E-value=4.8e-48  Score=328.09  Aligned_cols=244  Identities=32%  Similarity=0.501  Sum_probs=210.0

Q ss_pred             cccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCC------------HHHHHHHHHHHHHcCCcEEEEEccCC
Q 024338           19 EAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARS------------SKEAEEVCKEIEASGGQALTFGGDVS   86 (269)
Q Consensus        19 ~~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~------------~~~~~~~~~~l~~~~~~~~~~~~Dls   86 (269)
                      ....+++||++|||||++|||+++|++|+++|++|+++ +|+            .+.+++..+++...+.++.++.+|++
T Consensus         6 ~~~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   84 (278)
T 3sx2_A            6 SSEGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAV-DLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVR   84 (278)
T ss_dssp             ---CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEE-ECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTT
T ss_pred             CCCCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEE-ecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCC
Confidence            34567899999999999999999999999999999885 554            67777888888777889999999999


Q ss_pred             CHHHHHHHHHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCeEEEEcCCc
Q 024338           87 KEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK-KGRIINIASVV  165 (269)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~  165 (269)
                      |.++++++++++.+.++++|+||||||+.....    +.++|++.+++|+.+++.++++++|.|.+++ .|+||++||..
T Consensus        85 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~----~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~  160 (278)
T 3sx2_A           85 DRESLSAALQAGLDELGRLDIVVANAGIAPMSA----GDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSA  160 (278)
T ss_dssp             CHHHHHHHHHHHHHHHCCCCEEEECCCCCCCSS----THHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGG
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC----CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHH
Confidence            999999999999999999999999999865433    5889999999999999999999999997764 78999999999


Q ss_pred             cccCC----CCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccCh-HHHHH----------HHhcCC
Q 024338          166 GLVGN----IGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGE-DLEKK----------ILEKIP  230 (269)
Q Consensus       166 ~~~~~----~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~-~~~~~----------~~~~~~  230 (269)
                      +..+.    ++...|++||++++.|+++++.|+++.||+||+|+||+++|++...... .....          .....|
T Consensus       161 ~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  240 (278)
T 3sx2_A          161 GLAGVGSADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMP  240 (278)
T ss_dssp             GTSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTTSCSSS
T ss_pred             hcCCCccCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhhhhhcC
Confidence            98877    7778899999999999999999999999999999999999998754221 11111          112234


Q ss_pred             CCCCCCHHHHHHHHHHhccCCCCCCccccEEEecCCccC
Q 024338          231 LGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       231 ~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg~~~  269 (269)
                       +++.+|+|+|++++||+ +++++++|||+|.+|||+++
T Consensus       241 -~~~~~p~dvA~~v~~l~-s~~~~~itG~~i~vdGG~~~  277 (278)
T 3sx2_A          241 -VEVLAPEDVANAVAWLV-SDQARYITGVTLPVDAGFLN  277 (278)
T ss_dssp             -CSSBCHHHHHHHHHHHT-SGGGTTCCSCEEEESTTTTT
T ss_pred             -cCcCCHHHHHHHHHHHh-CcccccccCCEEeECCCccc
Confidence             57789999999999999 56778999999999999974

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=100.00  E-value=6.6e-48  Score=327.14  Aligned_cols=252  Identities=38%  Similarity=0.618  Sum_probs=224.2

Q ss_pred             hcccccC-CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHH
Q 024338           16 ATNEAAQ-NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESM   94 (269)
Q Consensus        16 ~~~~~~~-~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~   94 (269)
                      .+....| ++++|++|||||++|||+++++.|+++|++|++ ..|+++.++++.+++++.+.++.++.+|++|.++++++
T Consensus        11 ~~~~~~m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~   89 (277)
T 2rhc_B           11 VPRGSHMATQDSEVALVTGATSGIGLEIARRLGKEGLRVFV-CARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEAL   89 (277)
T ss_dssp             CCTTTTTCCTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CccccccccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHH
Confidence            3334444 789999999999999999999999999999888 58888888888888877777899999999999999999


Q ss_pred             HHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHH--HHhCCCCeEEEEcCCccccCCCC
Q 024338           95 IKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKI--MMKKKKGRIINIASVVGLVGNIG  172 (269)
Q Consensus        95 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--l~~~~~~~iv~isS~~~~~~~~~  172 (269)
                      ++++.+.++++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.  |.+++.++||++||..+..+.++
T Consensus        90 ~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~  169 (277)
T 2rhc_B           90 VAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVH  169 (277)
T ss_dssp             HHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCCTT
T ss_pred             HHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCCCC
Confidence            9999999999999999999887778889999999999999999999999999998  87777899999999999999999


Q ss_pred             ChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC-----------hHHHHHHHhcCCCCCCCCHHHHH
Q 024338          173 QANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG-----------EDLEKKILEKIPLGRYGQPEEVA  241 (269)
Q Consensus       173 ~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~a  241 (269)
                      ...|++||++++.|+++++.|+++.||+||+|+||+++|++.....           ++..+......|.+++.+|+|+|
T Consensus       170 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA  249 (277)
T 2rhc_B          170 AAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVA  249 (277)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHSTTSSCBCHHHHH
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHhcCCCCCCcCHHHHH
Confidence            9999999999999999999999999999999999999999764321           12223344567888999999999


Q ss_pred             HHHHHhccCCCCCCccccEEEecCCccC
Q 024338          242 GLVEFLALNPAAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       242 ~~~~~l~~~~~~~~~~G~~i~~dgg~~~  269 (269)
                      ++++||+ ++++++++|++|.+|||+.+
T Consensus       250 ~~v~~l~-s~~~~~~tG~~~~vdGG~~~  276 (277)
T 2rhc_B          250 EMVAYLI-GPGAAAVTAQALNVCGGLGN  276 (277)
T ss_dssp             HHHHHHH-SGGGTTCCSCEEEESTTCCC
T ss_pred             HHHHHHh-CchhcCCCCcEEEECCCccc
Confidence            9999999 55677999999999999863

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=100.00  E-value=5.4e-48  Score=329.87  Aligned_cols=245  Identities=28%  Similarity=0.494  Sum_probs=218.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      .+++||++|||||++|||+++|++|+++|++|+++..+.....+...+.+...+.++.++.+|++|.++++++++++.++
T Consensus        43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  122 (291)
T 3ijr_A           43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQ  122 (291)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999886444444566666667767788999999999999999999999999


Q ss_pred             cCCccEEEEccCCCC-CCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhH
Q 024338          102 WGTVDILINNAGITR-DTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       102 ~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                      ++++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|.|+  +.++||++||..+..+.++...|++||
T Consensus       123 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~--~~g~iv~isS~~~~~~~~~~~~Y~asK  200 (291)
T 3ijr_A          123 LGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLK--QGDVIINTASIVAYEGNETLIDYSATK  200 (291)
T ss_dssp             HSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCC--TTCEEEEECCTHHHHCCTTCHHHHHHH
T ss_pred             cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHh--hCCEEEEEechHhcCCCCCChhHHHHH
Confidence            999999999999864 35788899999999999999999999999999983  468999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc-ChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCcccc
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL-GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQ  259 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~  259 (269)
                      ++++.|+++++.|++++||+||+|+||+++|++.... .++....+....|++++.+|+|+|++++||+ +++++++|||
T Consensus       201 aa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~-s~~~~~itG~  279 (291)
T 3ijr_A          201 GAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQFGSNVPMQRPGQPYELAPAYVYLA-SSDSSYVTGQ  279 (291)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSCHHHHHHTTTTSTTSSCBCGGGTHHHHHHHH-SGGGTTCCSC
T ss_pred             HHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCCHHHHHHHHccCCCCCCcCHHHHHHHHHHHh-CCccCCCcCC
Confidence            9999999999999999999999999999999986543 3444455566788999999999999999999 5677899999


Q ss_pred             EEEecCCccC
Q 024338          260 VLTIDGGMVM  269 (269)
Q Consensus       260 ~i~~dgg~~~  269 (269)
                      +|.+|||+++
T Consensus       280 ~i~vdGG~~~  289 (291)
T 3ijr_A          280 MIHVNGGVIV  289 (291)
T ss_dssp             EEEESSSCCC
T ss_pred             EEEECCCccc
Confidence            9999999875

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=100.00  E-value=1.9e-47  Score=326.81  Aligned_cols=243  Identities=19%  Similarity=0.274  Sum_probs=210.3

Q ss_pred             CCCCCCEEEEeCCC--CchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGAS--RGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAV   99 (269)
Q Consensus        22 ~~~~~k~vlItGas--~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~   99 (269)
                      .++++|++|||||+  +|||+++|+.|+++|++|++ ..|+++..+.+ +++.+...++.++.+|++|.++++++++++.
T Consensus        27 ~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~-~~r~~~~~~~~-~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  104 (293)
T 3grk_A           27 GLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAF-TYQGDALKKRV-EPLAEELGAFVAGHCDVADAASIDAVFETLE  104 (293)
T ss_dssp             CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEE-EECSHHHHHHH-HHHHHHHTCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEE-EcCCHHHHHHH-HHHHHhcCCceEEECCCCCHHHHHHHHHHHH
Confidence            46899999999999  45999999999999999888 47775444333 3333333568899999999999999999999


Q ss_pred             HhcCCccEEEEccCCCC----CCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChh
Q 024338          100 DAWGTVDILINNAGITR----DTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQAN  175 (269)
Q Consensus       100 ~~~~~id~li~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~  175 (269)
                      ++++++|+||||||+..    ..++.+.+.++|++.+++|+.+++.++++++|.|++  .|+||++||..+..+.++...
T Consensus       105 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~  182 (293)
T 3grk_A          105 KKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD--GGSILTLTYYGAEKVMPNYNV  182 (293)
T ss_dssp             HHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT--CEEEEEEECGGGTSBCTTTTH
T ss_pred             HhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC--CCEEEEEeehhhccCCCchHH
Confidence            99999999999999876    467889999999999999999999999999999953  789999999999999999999


Q ss_pred             hHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC--hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCC
Q 024338          176 YSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG--EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAA  253 (269)
Q Consensus       176 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~  253 (269)
                      |++||+|++.|+++++.|+++.||+||+|+||+++|++.....  +...+......|++++.+|+|+|++++||+ ++.+
T Consensus       183 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~-s~~~  261 (293)
T 3grk_A          183 MGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIDEVGDVGLYFL-SDLS  261 (293)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHH-SGGG
T ss_pred             HHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHc-Cccc
Confidence            9999999999999999999999999999999999999876543  344556677889999999999999999999 5677


Q ss_pred             CCccccEEEecCCccC
Q 024338          254 GYITGQVLTIDGGMVM  269 (269)
Q Consensus       254 ~~~~G~~i~~dgg~~~  269 (269)
                      +++|||+|.+|||+.+
T Consensus       262 ~~itG~~i~vdGG~~~  277 (293)
T 3grk_A          262 RSVTGEVHHADSGYHV  277 (293)
T ss_dssp             TTCCSCEEEESTTGGG
T ss_pred             cCCcceEEEECCCccc
Confidence            8999999999999863

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=100.00  E-value=9e-48  Score=329.25  Aligned_cols=244  Identities=18%  Similarity=0.249  Sum_probs=215.1

Q ss_pred             cCCCCCCEEEEeCCCC--chHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASR--GIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTA   98 (269)
Q Consensus        21 ~~~~~~k~vlItGas~--giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~   98 (269)
                      ++++++|++|||||++  |||+++|+.|+++|++|+++ +|+.+..+.+.+...+. ..+.++.+|++|.++++++++++
T Consensus        25 ~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~-~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~  102 (296)
T 3k31_A           25 GMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALT-YLSETFKKRVDPLAESL-GVKLTVPCDVSDAESVDNMFKVL  102 (296)
T ss_dssp             CCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEE-ESSGGGHHHHHHHHHHH-TCCEEEECCTTCHHHHHHHHHHH
T ss_pred             hhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEE-eCChHHHHHHHHHHHhc-CCeEEEEcCCCCHHHHHHHHHHH
Confidence            4678999999999997  99999999999999998884 67765444444433333 34678999999999999999999


Q ss_pred             HHhcCCccEEEEccCCCCC----CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCCh
Q 024338           99 VDAWGTVDILINNAGITRD----TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQA  174 (269)
Q Consensus        99 ~~~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~  174 (269)
                      .++++++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|++  .|+||++||..+..+.++..
T Consensus       103 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~g~IV~isS~~~~~~~~~~~  180 (296)
T 3k31_A          103 AEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN--GGSILTLSYYGAEKVVPHYN  180 (296)
T ss_dssp             HHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT--CEEEEEEECGGGTSCCTTTT
T ss_pred             HHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCEEEEEEehhhccCCCCch
Confidence            9999999999999998764    67888999999999999999999999999999854  78999999999999999999


Q ss_pred             hhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccCh--HHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCC
Q 024338          175 NYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGE--DLEKKILEKIPLGRYGQPEEVAGLVEFLALNPA  252 (269)
Q Consensus       175 ~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~  252 (269)
                      .|++||++++.|+++++.|+++.||+||+|+||+++|++......  ...+......|++++.+|+|+|++++||+ ++.
T Consensus       181 ~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~-s~~  259 (296)
T 3k31_A          181 VMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPLRRNTTLDDVGGAALYLL-SDL  259 (296)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHH-SGG
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHc-CCc
Confidence            999999999999999999999999999999999999998765432  33455667789999999999999999999 567


Q ss_pred             CCCccccEEEecCCccC
Q 024338          253 AGYITGQVLTIDGGMVM  269 (269)
Q Consensus       253 ~~~~~G~~i~~dgg~~~  269 (269)
                      ++++|||+|.+|||+.+
T Consensus       260 a~~itG~~i~vdGG~~~  276 (296)
T 3k31_A          260 GRGTTGETVHVDCGYHV  276 (296)
T ss_dssp             GTTCCSCEEEESTTGGG
T ss_pred             cCCccCCEEEECCCccc
Confidence            78999999999999863

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=100.00  E-value=1.3e-47  Score=320.48  Aligned_cols=241  Identities=34%  Similarity=0.516  Sum_probs=204.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCH-HHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSS-KEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~-~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      +++++|++|||||++|||++++++|+++|++|+++ +|++ +.+++   ++++.+.++.++.+|++|.++++++++++.+
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~-~r~~~~~~~~---~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   78 (249)
T 2ew8_A            3 QRLKDKLAVITGGANGIGRAIAERFAVEGADIAIA-DLVPAPEAEA---AIRNLGRRVLTVKCDVSQPGDVEAFGKQVIS   78 (249)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ESSCCHHHHH---HHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE-cCCchhHHHH---HHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999885 6665 55544   4444567889999999999999999999999


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhH
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                      .++++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.++...|++||
T Consensus        79 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  158 (249)
T 2ew8_A           79 TFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTK  158 (249)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHH
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCchhHHHHH
Confidence            99999999999998877788899999999999999999999999999999887789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCccc-ccChHHHHHHHhc--CCCCCCCCHHHHHHHHHHhccCCCCCCcc
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTA-KLGEDLEKKILEK--IPLGRYGQPEEVAGLVEFLALNPAAGYIT  257 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~~l~~~~~~~~~~  257 (269)
                      ++++.|+++++.|+++.||+||+|+||+++|++.. .......+ ....  .|++++.+|+|+|++++||+ ++++++++
T Consensus       159 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~dva~~~~~l~-s~~~~~~t  236 (249)
T 2ew8_A          159 AANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFD-VLPNMLQAIPRLQVPLDLTGAAAFLA-SDDASFIT  236 (249)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCC-------------------CTTSSSCSCCCTHHHHHHHHHHT-SGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccchhh-HHHHhhCccCCCCCHHHHHHHHHHHc-CcccCCCC
Confidence            99999999999999999999999999999999865 32211001 1111  57788899999999999999 55678999


Q ss_pred             ccEEEecCCcc
Q 024338          258 GQVLTIDGGMV  268 (269)
Q Consensus       258 G~~i~~dgg~~  268 (269)
                      |++|.+|||+.
T Consensus       237 G~~~~vdGG~~  247 (249)
T 2ew8_A          237 GQTLAVDGGMV  247 (249)
T ss_dssp             SCEEEESSSCC
T ss_pred             CcEEEECCCcc
Confidence            99999999986

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=100.00  E-value=3.8e-48  Score=331.29  Aligned_cols=245  Identities=29%  Similarity=0.440  Sum_probs=217.2

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCC--HHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARS--SKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTA   98 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~--~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~   98 (269)
                      ++++++|++|||||++|||+++|++|+++|++|+++ .|+  .+..+++.+.++..+.++.++.+|++|.++++++++++
T Consensus        44 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  122 (294)
T 3r3s_A           44 SGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAIN-YLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKA  122 (294)
T ss_dssp             CSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-CCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE-eCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHH
Confidence            356899999999999999999999999999999885 554  34566677777777888999999999999999999999


Q ss_pred             HHhcCCccEEEEccCCCC-CCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhH
Q 024338           99 VDAWGTVDILINNAGITR-DTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYS  177 (269)
Q Consensus        99 ~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~  177 (269)
                      .+.++++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|.|.  +.|+||++||..+..+.++...|+
T Consensus       123 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~--~~g~Iv~isS~~~~~~~~~~~~Y~  200 (294)
T 3r3s_A          123 REALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLP--KGASIITTSSIQAYQPSPHLLDYA  200 (294)
T ss_dssp             HHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCC--TTCEEEEECCGGGTSCCTTCHHHH
T ss_pred             HHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhh--cCCEEEEECChhhccCCCCchHHH
Confidence            999999999999999865 46788999999999999999999999999999884  458999999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccc--cChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCC
Q 024338          178 AAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAK--LGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGY  255 (269)
Q Consensus       178 ~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~  255 (269)
                      +||+++++|+++++.|++++||+||+|+||+++|++...  ..+...+......|++++.+|+|+|++++||+ ++++++
T Consensus       201 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~-s~~~~~  279 (294)
T 3r3s_A          201 ATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLA-SQESSY  279 (294)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCGGGSTTTTTTSTTSSCBCGGGGHHHHHHHH-SGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh-CccccC
Confidence            999999999999999999999999999999999997322  22333344556678899999999999999999 567889


Q ss_pred             ccccEEEecCCccC
Q 024338          256 ITGQVLTIDGGMVM  269 (269)
Q Consensus       256 ~~G~~i~~dgg~~~  269 (269)
                      +|||+|.+|||+.+
T Consensus       280 itG~~i~vdGG~~l  293 (294)
T 3r3s_A          280 VTAEVHGVCGGEHL  293 (294)
T ss_dssp             CCSCEEEESTTCCC
T ss_pred             CCCCEEEECCCccC
Confidence            99999999999875

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=100.00  E-value=6.6e-48  Score=325.79  Aligned_cols=237  Identities=36%  Similarity=0.583  Sum_probs=210.7

Q ss_pred             cccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHH
Q 024338           19 EAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTA   98 (269)
Q Consensus        19 ~~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~   98 (269)
                      ....++++|++|||||++|||+++|++|+++|++|+++ +|+.+..          ......+.+|++|.++++++++++
T Consensus         7 ~~~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~-~r~~~~~----------~~~~~~~~~Dv~~~~~v~~~~~~~   75 (269)
T 3vtz_A            7 HHMEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSV-SLDEKSD----------VNVSDHFKIDVTNEEEVKEAVEKT   75 (269)
T ss_dssp             ---CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEE-ESCC--C----------TTSSEEEECCTTCHHHHHHHHHHH
T ss_pred             ccccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEE-eCCchhc----------cCceeEEEecCCCHHHHHHHHHHH
Confidence            34567899999999999999999999999999999885 6665432          124567899999999999999999


Q ss_pred             HHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHH
Q 024338           99 VDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSA  178 (269)
Q Consensus        99 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~  178 (269)
                      .+.++++|+||||||+....++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|++
T Consensus        76 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  155 (269)
T 3vtz_A           76 TKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVT  155 (269)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHH
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCChhHHH
Confidence            99999999999999998888889999999999999999999999999999998888899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC-----------hHHHHHHHhcCCCCCCCCHHHHHHHHHHh
Q 024338          179 AKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG-----------EDLEKKILEKIPLGRYGQPEEVAGLVEFL  247 (269)
Q Consensus       179 sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~a~~~~~l  247 (269)
                      ||+++++|+++++.|+++ ||+||+|+||+++|++.....           +...+......|++++.+|+|+|++++||
T Consensus       156 sKaa~~~l~~~la~e~~~-~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L  234 (269)
T 3vtz_A          156 SKHALLGLTRSVAIDYAP-KIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVAFL  234 (269)
T ss_dssp             HHHHHHHHHHHHHHHHTT-TEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcC-CCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            999999999999999998 899999999999999764321           23445566778999999999999999999


Q ss_pred             ccCCCCCCccccEEEecCCcc
Q 024338          248 ALNPAAGYITGQVLTIDGGMV  268 (269)
Q Consensus       248 ~~~~~~~~~~G~~i~~dgg~~  268 (269)
                      + ++.++++||++|.+|||++
T Consensus       235 ~-s~~~~~itG~~i~vdGG~~  254 (269)
T 3vtz_A          235 A-SDRSSFITGACLTVDGGLL  254 (269)
T ss_dssp             H-SGGGTTCCSCEEEESTTGG
T ss_pred             h-CCccCCCcCcEEEECCCcc
Confidence            9 5677899999999999986

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=100.00  E-value=2e-47  Score=324.79  Aligned_cols=242  Identities=29%  Similarity=0.455  Sum_probs=210.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      |++++|++|||||++|||+++|++|+++|++|++ .+|+.+.++++.+++   +.++.++.+|++|.++++++++++.+.
T Consensus         1 M~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~-~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~   76 (281)
T 3zv4_A            1 MKLTGEVALITGGASGLGRALVDRFVAEGARVAV-LDKSAERLRELEVAH---GGNAVGVVGDVRSLQDQKRAAERCLAA   76 (281)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHT---BTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEE-EeCCHHHHHHHHHHc---CCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence            4688999999999999999999999999999988 588888777665543   568999999999999999999999999


Q ss_pred             cCCccEEEEccCCCCC-Ccc----cCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhh
Q 024338          102 WGTVDILINNAGITRD-TLL----MRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANY  176 (269)
Q Consensus       102 ~~~id~li~~ag~~~~-~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y  176 (269)
                      ++++|+||||||+... .++    .+.+.++|++.+++|+.+++.++++++|.|.++ +|+||++||..+..+.++...|
T Consensus        77 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y  155 (281)
T 3zv4_A           77 FGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSS-RGSVVFTISNAGFYPNGGGPLY  155 (281)
T ss_dssp             HSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCGGGTSSSSSCHHH
T ss_pred             cCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCeEEEEecchhccCCCCCchh
Confidence            9999999999998643 223    244567899999999999999999999999765 4899999999999999999999


Q ss_pred             HHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC----------hHHHHHHHhcCCCCCCCCHHHHHHHHHH
Q 024338          177 SAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG----------EDLEKKILEKIPLGRYGQPEEVAGLVEF  246 (269)
Q Consensus       177 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~a~~~~~  246 (269)
                      ++||+++++|+++++.|+++. |+||+|+||+++|++.....          ....+......|++++.+|+|+|++++|
T Consensus       156 ~asKaa~~~l~~~la~e~~~~-Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~f  234 (281)
T 3zv4_A          156 TATKHAVVGLVRQMAFELAPH-VRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEYTGAYVF  234 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTT-SEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCTTSSCCCGGGGSHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcCC-CEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence            999999999999999999987 99999999999999864321          1234556677899999999999999999


Q ss_pred             hccCCCCCCccccEEEecCCccC
Q 024338          247 LALNPAAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       247 l~~~~~~~~~~G~~i~~dgg~~~  269 (269)
                      |++++.+.++|||+|.+|||+.+
T Consensus       235 L~s~~~~~~itG~~i~vdGG~~~  257 (281)
T 3zv4_A          235 FATRGDSLPATGALLNYDGGMGV  257 (281)
T ss_dssp             HHSTTTSTTCSSCEEEESSSGGG
T ss_pred             hhcccccccccCcEEEECCCCcc
Confidence            99657888999999999999863

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=2.1e-47  Score=327.10  Aligned_cols=245  Identities=30%  Similarity=0.476  Sum_probs=217.2

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCC---cEEEEEccCCCHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGG---QALTFGGDVSKEADVESMIKT   97 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~---~~~~~~~Dls~~~~~~~~~~~   97 (269)
                      ++++++|++|||||++|||+++++.|+++|++|++ ..|+.+.++++.+++...+.   ++.++.+|++|.+++++++++
T Consensus        21 m~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~   99 (297)
T 1xhl_A           21 MARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTI-TGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINT   99 (297)
T ss_dssp             --CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHH
Confidence            35689999999999999999999999999999888 58898888888888877665   789999999999999999999


Q ss_pred             HHHhcCCccEEEEccCCCCCCc--ccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCC-CCCh
Q 024338           98 AVDAWGTVDILINNAGITRDTL--LMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGN-IGQA  174 (269)
Q Consensus        98 ~~~~~~~id~li~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~-~~~~  174 (269)
                      +.+.++++|+||||||.....+  +.+.+.++|++.+++|+.+++.++++++|.|.+++ |+||++||..+..+. ++..
T Consensus       100 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~~~~~~  178 (297)
T 1xhl_A          100 TLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAHSGYP  178 (297)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSCCTTSH
T ss_pred             HHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCCCCCcc
Confidence            9999999999999999876666  88899999999999999999999999999998766 999999999999888 8999


Q ss_pred             hhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc--Ch-------HHHHHHHhcCCCCCCCCHHHHHHHHH
Q 024338          175 NYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL--GE-------DLEKKILEKIPLGRYGQPEEVAGLVE  245 (269)
Q Consensus       175 ~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~--~~-------~~~~~~~~~~~~~~~~~~~~~a~~~~  245 (269)
                      .|++||++++.|+++++.|+++.||+||+|+||+++|++....  ..       +..+......|.+++.+|+|+|++++
T Consensus       179 ~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~  258 (297)
T 1xhl_A          179 YYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIV  258 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            9999999999999999999999999999999999999986543  11       11222234467888999999999999


Q ss_pred             HhccCCC-CCCccccEEEecCCcc
Q 024338          246 FLALNPA-AGYITGQVLTIDGGMV  268 (269)
Q Consensus       246 ~l~~~~~-~~~~~G~~i~~dgg~~  268 (269)
                      ||++ +. +++++|++|.+|||+.
T Consensus       259 ~l~s-~~~~~~itG~~i~vdGG~~  281 (297)
T 1xhl_A          259 FLAD-RNLSSYIIGQSIVADGGST  281 (297)
T ss_dssp             HHHC-HHHHTTCCSCEEEESTTGG
T ss_pred             HHhC-CcccCCccCcEEEECCCcc
Confidence            9994 45 7799999999999975

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=100.00  E-value=5.2e-48  Score=324.28  Aligned_cols=238  Identities=34%  Similarity=0.529  Sum_probs=200.7

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      .|++++|++|||||++|||+++|++|+++|++|+++ .|+.+..   .++   .+.++.++.+|++|.++++++++++.+
T Consensus         4 ~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~-~r~~~~~---~~~---~~~~~~~~~~D~~~~~~v~~~~~~~~~   76 (257)
T 3tl3_A            4 SMEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVL-DIRGEDV---VAD---LGDRARFAAADVTDEAAVASALDLAET   76 (257)
T ss_dssp             ------CEEEEETTTSHHHHHHHHHHHHHTCEEEEE-ESSCHHH---HHH---TCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEE-eCchHHH---HHh---cCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999986 4443322   222   256899999999999999999998877


Q ss_pred             hcCCccEEEEccCCCCCCc----ccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--------CCCCeEEEEcCCcccc
Q 024338          101 AWGTVDILINNAGITRDTL----LMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMK--------KKKGRIINIASVVGLV  168 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~--------~~~~~iv~isS~~~~~  168 (269)
                       ++++|+||||||.....+    ..+.+.++|++.+++|+.+++.++++++|.|.+        ++.|+||++||..+..
T Consensus        77 -~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  155 (257)
T 3tl3_A           77 -MGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFD  155 (257)
T ss_dssp             -HSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--C
T ss_pred             -hCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcC
Confidence             899999999999864432    235889999999999999999999999999987        5678999999999999


Q ss_pred             CCCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCC-CCCCCHHHHHHHHHHh
Q 024338          169 GNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPL-GRYGQPEEVAGLVEFL  247 (269)
Q Consensus       169 ~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~~~l  247 (269)
                      +.++...|++||+++++|+++++.|++++||+||+|+||+++|++.....+...+......|. +++.+|+|+|++++||
T Consensus       156 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~r~~~p~dva~~v~~l  235 (257)
T 3tl3_A          156 GQIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLPEEARASLGKQVPHPSRLGNPDEYGALAVHI  235 (257)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---CHHHHHHHHHTSSSSCSCBCHHHHHHHHHHH
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhccHHHHHHHHhcCCCCCCccCHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999888777777777777887 8999999999999999


Q ss_pred             ccCCCCCCccccEEEecCCccC
Q 024338          248 ALNPAAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       248 ~~~~~~~~~~G~~i~~dgg~~~  269 (269)
                      +++   .++|||+|.+|||+.+
T Consensus       236 ~s~---~~itG~~i~vdGG~~~  254 (257)
T 3tl3_A          236 IEN---PMLNGEVIRLDGAIRM  254 (257)
T ss_dssp             HHC---TTCCSCEEEESTTC--
T ss_pred             hcC---CCCCCCEEEECCCccC
Confidence            954   5899999999999874

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=100.00  E-value=5e-47  Score=323.44  Aligned_cols=249  Identities=32%  Similarity=0.483  Sum_probs=211.6

Q ss_pred             cccccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCH-HHHHHHHHHHH-HcCCcEEEEEccCCC----HHH
Q 024338           17 TNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSS-KEAEEVCKEIE-ASGGQALTFGGDVSK----EAD   90 (269)
Q Consensus        17 ~~~~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~-~~~~~~~~~l~-~~~~~~~~~~~Dls~----~~~   90 (269)
                      ++....++++|++|||||++|||+++|+.|+++|++|+++ .|+. +.++++.+++. ..+.++.++.+|++|    .++
T Consensus        14 ~~~~~~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~-~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~   92 (288)
T 2x9g_A           14 LVPRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIH-YHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPAS   92 (288)
T ss_dssp             --------CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEE-ESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHH
T ss_pred             cCCCCcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEE-eCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHH
Confidence            3444567899999999999999999999999999999885 6666 77888888876 456789999999999    999


Q ss_pred             HHHHHHHHHHhcCCccEEEEccCCCCCCcc-----cC-----CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC------
Q 024338           91 VESMIKTAVDAWGTVDILINNAGITRDTLL-----MR-----MKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK------  154 (269)
Q Consensus        91 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~-----~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~------  154 (269)
                      ++++++++.+.++++|+||||||+....++     .+     .+.++|++.+++|+.+++.+++.++|.|.+++      
T Consensus        93 v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~  172 (288)
T 2x9g_A           93 CEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSS  172 (288)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CC
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCC
Confidence            999999999999999999999998766666     56     78899999999999999999999999997765      


Q ss_pred             CCeEEEEcCCccccCCCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCC
Q 024338          155 KGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRY  234 (269)
Q Consensus       155 ~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~  234 (269)
                      .++||++||..+..+.++...|++||++++.|+++++.|+++.||+||+|+||+++|++ . ..+...+......|.+++
T Consensus       173 ~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~-~~~~~~~~~~~~~p~~r~  250 (288)
T 2x9g_A          173 NLSIVNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-A-MGEEEKDKWRRKVPLGRR  250 (288)
T ss_dssp             CEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-T-SCHHHHHHHHHTCTTTSS
T ss_pred             CeEEEEEecccccCCCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-c-cChHHHHHHHhhCCCCCC
Confidence            78999999999999999999999999999999999999999999999999999999998 4 223333445556788888


Q ss_pred             -CCHHHHHHHHHHhccCCCCCCccccEEEecCCccC
Q 024338          235 -GQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       235 -~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg~~~  269 (269)
                       .+|+|+|++++||+ ++.+++++|++|.+|||+.+
T Consensus       251 ~~~pedvA~~v~~l~-s~~~~~itG~~i~vdGG~~~  285 (288)
T 2x9g_A          251 EASAEQIADAVIFLV-SGSAQYITGSIIKVDGGLSL  285 (288)
T ss_dssp             CCCHHHHHHHHHHHH-SGGGTTCCSCEEEESTTGGG
T ss_pred             CCCHHHHHHHHHHHh-CccccCccCCEEEECcchhh
Confidence             89999999999999 56778999999999999853

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=100.00  E-value=7.6e-47  Score=321.55  Aligned_cols=245  Identities=35%  Similarity=0.584  Sum_probs=216.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      +++++|++|||||++|||++++++|+++|++|+++.++..+..+++.+++.+.+.++.++.+|++|.++++++++++.+.
T Consensus        25 ~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  104 (283)
T 1g0o_A           25 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKI  104 (283)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence            56889999999999999999999999999999886444444566677777777778999999999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCC-ChhhHHhH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIG-QANYSAAK  180 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~-~~~Y~~sK  180 (269)
                      ++++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|  ++.++||++||..+..+.++ ...|++||
T Consensus       105 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~--~~~g~iv~isS~~~~~~~~~~~~~Y~asK  182 (283)
T 1g0o_A          105 FGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHL--EIGGRLILMGSITGQAKAVPKHAVYSGSK  182 (283)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHS--CTTCEEEEECCGGGTCSSCSSCHHHHHHH
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH--hcCCeEEEEechhhccCCCCCCcchHHHH
Confidence            9999999999998877788899999999999999999999999999999  46789999999999888764 89999999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc-----------ChHHHHHHHh--cCCCCCCCCHHHHHHHHHHh
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL-----------GEDLEKKILE--KIPLGRYGQPEEVAGLVEFL  247 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-----------~~~~~~~~~~--~~~~~~~~~~~~~a~~~~~l  247 (269)
                      ++++.|+++++.|+++.||+||+|+||+++|++....           .++..+.+..  ..|++++.+|+|+|++++||
T Consensus       183 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l  262 (283)
T 1g0o_A          183 GAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCFL  262 (283)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCCCCCCcCHHHHHHHHHHH
Confidence            9999999999999999999999999999999975432           1233334444  67889999999999999999


Q ss_pred             ccCCCCCCccccEEEecCCccC
Q 024338          248 ALNPAAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       248 ~~~~~~~~~~G~~i~~dgg~~~  269 (269)
                      + ++.++++||++|.+|||+.+
T Consensus       263 ~-s~~~~~itG~~i~vdgG~~~  283 (283)
T 1g0o_A          263 A-SNDGGWVTGKVIGIDGGACM  283 (283)
T ss_dssp             H-SGGGTTCCSCEEEESTTCCC
T ss_pred             h-CccccCcCCCEEEeCCCccC
Confidence            9 55677999999999999864

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=100.00  E-value=7.5e-47  Score=317.73  Aligned_cols=246  Identities=30%  Similarity=0.512  Sum_probs=219.7

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      ..++++|++|||||++|||++++++|+++|++|++ .+|+.+.+++..+++...+.++.++.+|++|.++++++++++.+
T Consensus         9 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   87 (260)
T 2zat_A            9 RKPLENKVALVTASTDGIGLAIARRLAQDGAHVVV-SSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVN   87 (260)
T ss_dssp             -CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            35678999999999999999999999999999888 57888888888888877777899999999999999999999999


Q ss_pred             hcCCccEEEEccCCCC-CCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHh
Q 024338          101 AWGTVDILINNAGITR-DTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAA  179 (269)
Q Consensus       101 ~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  179 (269)
                      .++++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.++...|++|
T Consensus        88 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  167 (260)
T 2zat_A           88 LHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVS  167 (260)
T ss_dssp             HHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCCCchhHHHH
Confidence            9999999999999864 467788999999999999999999999999999988888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc--ChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCcc
Q 024338          180 KAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL--GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYIT  257 (269)
Q Consensus       180 K~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~  257 (269)
                      |++++.|+++++.|+++.||+||+|+||+++|++....  .+..........|.+++.+|+|+|++++||+ ++++++++
T Consensus       168 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~-s~~~~~~t  246 (260)
T 2zat_A          168 KTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLC-SEDASYIT  246 (260)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSSHHHHHHHHHHHTCSSCBCGGGGHHHHHHHT-SGGGTTCC
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHc-CcccCCcc
Confidence            99999999999999999999999999999999986431  2222233445567888999999999999999 55677999


Q ss_pred             ccEEEecCCcc
Q 024338          258 GQVLTIDGGMV  268 (269)
Q Consensus       258 G~~i~~dgg~~  268 (269)
                      |++|.+|||+.
T Consensus       247 G~~~~vdgG~~  257 (260)
T 2zat_A          247 GETVVVGGGTA  257 (260)
T ss_dssp             SCEEEESTTCC
T ss_pred             CCEEEECCCcc
Confidence            99999999975

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=100.00  E-value=3.1e-47  Score=320.06  Aligned_cols=240  Identities=21%  Similarity=0.304  Sum_probs=196.2

Q ss_pred             cccccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHH
Q 024338           17 TNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIK   96 (269)
Q Consensus        17 ~~~~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~   96 (269)
                      +...+|++++|++|||||++|||+++|+.|+++|++|+++ +|+.+...+...+.     .+.++.+|++|.++++++++
T Consensus        18 ~~~~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~-~r~~~~~~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~   91 (260)
T 3gem_A           18 YFQGHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIIS-YRTEHASVTELRQA-----GAVALYGDFSCETGIMAFID   91 (260)
T ss_dssp             ---------CCCEEESSTTSHHHHHHHHHHHHTTCCEEEE-ESSCCHHHHHHHHH-----TCEEEECCTTSHHHHHHHHH
T ss_pred             ccccCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE-eCChHHHHHHHHhc-----CCeEEECCCCCHHHHHHHHH
Confidence            3444588999999999999999999999999999999885 66665543333322     26789999999999999999


Q ss_pred             HHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhh
Q 024338           97 TAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANY  176 (269)
Q Consensus        97 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y  176 (269)
                      ++.+.++++|+||||||...... .+.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||..+..+.++...|
T Consensus        92 ~~~~~~g~iD~lv~nAg~~~~~~-~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y  170 (260)
T 3gem_A           92 LLKTQTSSLRAVVHNASEWLAET-PGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSKHIAY  170 (260)
T ss_dssp             HHHHHCSCCSEEEECCCCCCCCC-TTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCSSCHHH
T ss_pred             HHHHhcCCCCEEEECCCccCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCcHhH
Confidence            99999999999999999876554 56778999999999999999999999999988888999999999999999999999


Q ss_pred             HHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCc
Q 024338          177 SAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYI  256 (269)
Q Consensus       177 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~  256 (269)
                      ++||++++.|+++++.|+++ +|+||+|+||+++|++..  .+..........|++++.+|+|+|++++||++   +.++
T Consensus       171 ~asKaa~~~l~~~la~e~~~-~Irvn~v~PG~v~t~~~~--~~~~~~~~~~~~p~~r~~~~edva~~v~~L~~---~~~i  244 (260)
T 3gem_A          171 CATKAGLESLTLSFAARFAP-LVKVNGIAPALLMFQPKD--DAAYRANALAKSALGIEPGAEVIYQSLRYLLD---STYV  244 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHTT-TCEEEEEEECTTCC-----------------CCSCCCCCTHHHHHHHHHHHH---CSSC
T ss_pred             HHHHHHHHHHHHHHHHHHCC-CCEEEEEeecccccCCCC--CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhh---CCCC
Confidence            99999999999999999998 799999999999999643  23334455667788999999999999999983   4689


Q ss_pred             cccEEEecCCccC
Q 024338          257 TGQVLTIDGGMVM  269 (269)
Q Consensus       257 ~G~~i~~dgg~~~  269 (269)
                      |||+|.+|||+.+
T Consensus       245 tG~~i~vdGG~~~  257 (260)
T 3gem_A          245 TGTTLTVNGGRHV  257 (260)
T ss_dssp             CSCEEEESTTTTT
T ss_pred             CCCEEEECCCccc
Confidence            9999999999874

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=3.1e-47  Score=323.50  Aligned_cols=244  Identities=30%  Similarity=0.452  Sum_probs=216.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCC---cEEEEEccCCCHHHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGG---QALTFGGDVSKEADVESMIKTA   98 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~---~~~~~~~Dls~~~~~~~~~~~~   98 (269)
                      +++++|++|||||++|||+++|++|+++|++|++ .+|+.+.++++.+++...+.   ++.++.+|++|.++++++++++
T Consensus         2 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   80 (280)
T 1xkq_A            2 PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTI-TGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINST   80 (280)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHH
Confidence            3578999999999999999999999999999988 58888888888888876555   7899999999999999999999


Q ss_pred             HHhcCCccEEEEccCCCCCCc----ccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCC-CCC
Q 024338           99 VDAWGTVDILINNAGITRDTL----LMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGN-IGQ  173 (269)
Q Consensus        99 ~~~~~~id~li~~ag~~~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~-~~~  173 (269)
                      .++++++|+||||||.....+    +.+.+.++|++.+++|+.+++.++++++|.|.+++ ++||++||..+..+. ++.
T Consensus        81 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~  159 (280)
T 1xkq_A           81 LKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPDF  159 (280)
T ss_dssp             HHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCCCSS
T ss_pred             HHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCCCCcc
Confidence            999999999999999876655    77889999999999999999999999999997665 999999999999888 899


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc--Ch-------HHHHHHHhcCCCCCCCCHHHHHHHH
Q 024338          174 ANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL--GE-------DLEKKILEKIPLGRYGQPEEVAGLV  244 (269)
Q Consensus       174 ~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~--~~-------~~~~~~~~~~~~~~~~~~~~~a~~~  244 (269)
                      ..|++||++++.|+++++.|+++.||+||+|+||+++|++....  ..       +..+......|.+++.+|+|+|+++
T Consensus       160 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pedvA~~v  239 (280)
T 1xkq_A          160 LYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANII  239 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHcCCCCCCCCCHHHHHHHH
Confidence            99999999999999999999999999999999999999986543  11       1122223346788899999999999


Q ss_pred             HHhccCCC-CCCccccEEEecCCcc
Q 024338          245 EFLALNPA-AGYITGQVLTIDGGMV  268 (269)
Q Consensus       245 ~~l~~~~~-~~~~~G~~i~~dgg~~  268 (269)
                      +||++ +. +++++|++|.+|||+.
T Consensus       240 ~~l~s-~~~~~~~tG~~i~vdgG~~  263 (280)
T 1xkq_A          240 LFLAD-RNLSFYILGQSIVADGGTS  263 (280)
T ss_dssp             HHHHC-HHHHTTCCSCEEEESTTGG
T ss_pred             HHhcC-cccccCccCCeEEECCCcc
Confidence            99994 45 6799999999999975

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=100.00  E-value=2.1e-47  Score=319.88  Aligned_cols=244  Identities=34%  Similarity=0.543  Sum_probs=222.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      .+++|++|||||++|||++++++|+++|++|+++.+|+.+..++..+++...+.++.++.+|++|.++++++++++.+.+
T Consensus         4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (255)
T 3icc_A            4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNEL   83 (255)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHh
Confidence            36799999999999999999999999999999877888888888888998888899999999999999999999998876


Q ss_pred             C------CccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhh
Q 024338          103 G------TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANY  176 (269)
Q Consensus       103 ~------~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y  176 (269)
                      +      ++|+||||||+....++.+.+.++|++.+++|+.+++.+++.++|.|  ++.++||++||..+..+.++...|
T Consensus        84 ~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~--~~~~~iv~isS~~~~~~~~~~~~Y  161 (255)
T 3icc_A           84 QNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRL--RDNSRIINISSAATRISLPDFIAY  161 (255)
T ss_dssp             HHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTE--EEEEEEEEECCGGGTSCCTTBHHH
T ss_pred             cccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhh--CCCCEEEEeCChhhccCCCCcchh
Confidence            4      49999999999887888899999999999999999999999999988  446799999999999999999999


Q ss_pred             HHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccCh--HHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCC
Q 024338          177 SAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGE--DLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAG  254 (269)
Q Consensus       177 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~  254 (269)
                      ++||++++.|+++++.|+++.||+|++|+||+++|++.....+  ..........+++++.+|+|+|++++||+ ++++.
T Consensus       162 ~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~-s~~~~  240 (255)
T 3icc_A          162 SMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLA-SPDSR  240 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHHHHHHHHHTSTTSSCBCHHHHHHHHHHHH-SGGGT
T ss_pred             HHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHHHHHhhhccCCcCCCCCHHHHHHHHHHHh-CcccC
Confidence            9999999999999999999999999999999999998876543  33455666778899999999999999999 56778


Q ss_pred             CccccEEEecCCccC
Q 024338          255 YITGQVLTIDGGMVM  269 (269)
Q Consensus       255 ~~~G~~i~~dgg~~~  269 (269)
                      +++||+|.+|||+.|
T Consensus       241 ~~tG~~i~vdgG~~l  255 (255)
T 3icc_A          241 WVTGQLIDVSGGSCL  255 (255)
T ss_dssp             TCCSCEEEESSSTTC
T ss_pred             CccCCEEEecCCeeC
Confidence            999999999999976

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=100.00  E-value=1.3e-47  Score=320.96  Aligned_cols=244  Identities=34%  Similarity=0.608  Sum_probs=184.6

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      .+++++|++|||||++|||+++|++|+++|++|++ .+|+.+.++++.+++.+.+.++.++.+|++|.++++++++++.+
T Consensus         4 ~~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (253)
T 3qiv_A            4 SMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVV-ADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLA   82 (253)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEE-EcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999888 58999999999999988888999999999999999999999999


Q ss_pred             hcCCccEEEEccCCC---CCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhH
Q 024338          101 AWGTVDILINNAGIT---RDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYS  177 (269)
Q Consensus       101 ~~~~id~li~~ag~~---~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~  177 (269)
                      .++++|+||||||+.   ...++.+.+.++|++.+++|+.+++.++++++|.|.+++.++||++||..+.   ++...|+
T Consensus        83 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~---~~~~~Y~  159 (253)
T 3qiv_A           83 EFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAW---LYSNYYG  159 (253)
T ss_dssp             HHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC--------------
T ss_pred             HcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCcccc---CCCchhH
Confidence            999999999999984   3355678899999999999999999999999999988889999999999887   4667899


Q ss_pred             HhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC-hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCc
Q 024338          178 AAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG-EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYI  256 (269)
Q Consensus       178 ~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~  256 (269)
                      +||++++.|+++++.|+++.||+|++|+||+++|++..... ++..+...+..|.+++.+|+|+|++++||+ +++..++
T Consensus       160 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~-s~~~~~~  238 (253)
T 3qiv_A          160 LAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPKEMVDDIVKGLPLSRMGTPDDLVGMCLFLL-SDEASWI  238 (253)
T ss_dssp             CCHHHHHHHHHHHHHHTTTTTEEEEEEEC-------------------------------CCHHHHHHHHHH-SGGGTTC
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcHHHHHHHhccCCCCCCCCHHHHHHHHHHHc-CccccCC
Confidence            99999999999999999999999999999999999876543 334455666778888899999999999999 5567799


Q ss_pred             cccEEEecCCccC
Q 024338          257 TGQVLTIDGGMVM  269 (269)
Q Consensus       257 ~G~~i~~dgg~~~  269 (269)
                      +||+|.+|||+.+
T Consensus       239 tG~~~~vdgG~~~  251 (253)
T 3qiv_A          239 TGQIFNVDGGQII  251 (253)
T ss_dssp             CSCEEEC------
T ss_pred             CCCEEEECCCeec
Confidence            9999999999864

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-46  Score=326.63  Aligned_cols=244  Identities=30%  Similarity=0.431  Sum_probs=217.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHH-HcCCcEEEEEccCCCHH------------
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIE-ASGGQALTFGGDVSKEA------------   89 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~-~~~~~~~~~~~Dls~~~------------   89 (269)
                      ++++|++|||||++|||+++++.|+++|++|+++..|+.+.++++.+++. ..+.++.++.+|++|.+            
T Consensus        43 ~l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~  122 (328)
T 2qhx_A           43 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAP  122 (328)
T ss_dssp             --CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CC
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhccccccccccc
Confidence            38899999999999999999999999999998853388888888888886 45678999999999999            


Q ss_pred             -----HHHHHHHHHHHhcCCccEEEEccCCCCCCcccCCC--------------HHHHHHHHHHHhHHHHHHHHHHHHHH
Q 024338           90 -----DVESMIKTAVDAWGTVDILINNAGITRDTLLMRMK--------------KSQWQDVIDLNLTGVFLCTQAAAKIM  150 (269)
Q Consensus        90 -----~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~l~~~~~~~l  150 (269)
                           +++++++++.+.++++|+||||||+....++.+.+              .++|++.+++|+.+++.++++++|.|
T Consensus       123 ~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m  202 (328)
T 2qhx_A          123 VTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRV  202 (328)
T ss_dssp             BCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             cccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                 99999999999999999999999988777777888              89999999999999999999999999


Q ss_pred             HhCC------CCeEEEEcCCccccCCCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHH
Q 024338          151 MKKK------KGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKK  224 (269)
Q Consensus       151 ~~~~------~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~  224 (269)
                      .+++      .++||++||..+..+.++...|++||++++.|+++++.|+++.||+||+|+||+++|++ ... +...+.
T Consensus       203 ~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~~~-~~~~~~  280 (328)
T 2qhx_A          203 AGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-DMP-PAVWEG  280 (328)
T ss_dssp             HHSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-CSC-HHHHHH
T ss_pred             HhcCCcCCCCCcEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-ccc-HHHHHH
Confidence            8776      79999999999999999999999999999999999999999999999999999999998 433 444455


Q ss_pred             HHhcCCCC-CCCCHHHHHHHHHHhccCCCCCCccccEEEecCCccC
Q 024338          225 ILEKIPLG-RYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       225 ~~~~~~~~-~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg~~~  269 (269)
                      .....|++ ++.+|+|+|++++||+ ++.+.+++|++|.+|||+.+
T Consensus       281 ~~~~~p~~~r~~~pedvA~~v~~l~-s~~~~~itG~~i~vdGG~~~  325 (328)
T 2qhx_A          281 HRSKVPLYQRDSSAAEVSDVVIFLC-SSKAKYITGTCVKVDGGYSL  325 (328)
T ss_dssp             HHTTCTTTTSCBCHHHHHHHHHHHH-SGGGTTCCSCEEEESTTGGG
T ss_pred             HHhhCCCCCCCCCHHHHHHHHHHHh-CccccCccCcEEEECCCccc
Confidence            55667888 8899999999999999 55678999999999999853

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=100.00  E-value=1.3e-47  Score=321.44  Aligned_cols=242  Identities=33%  Similarity=0.528  Sum_probs=212.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      ++++|++|||||++|||++++++|+++|++|++ .+|+.+.++++.+++   +.++.++.+|++|.++++++++++.+.+
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~-~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (254)
T 1hdc_A            2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVL-ADVLDEEGAATAREL---GDAARYQHLDVTIEEDWQRVVAYAREEF   77 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHh---CCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            467999999999999999999999999999888 478887777666555   4578889999999999999999999999


Q ss_pred             CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHH
Q 024338          103 GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAG  182 (269)
Q Consensus       103 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  182 (269)
                      +++|+||||||.....++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.++...|++||++
T Consensus        78 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a  157 (254)
T 1hdc_A           78 GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWG  157 (254)
T ss_dssp             SCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCchhHHHHHHH
Confidence            99999999999887778888999999999999999999999999999988778999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCC-CHHHHHHHHHHhccCCCCCCccccEE
Q 024338          183 VIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYG-QPEEVAGLVEFLALNPAAGYITGQVL  261 (269)
Q Consensus       183 l~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~a~~~~~l~~~~~~~~~~G~~i  261 (269)
                      ++.|+++++.|+++.||+|++|+||+++|++.....+...+......|++++. +|+|+|++++||+ ++++++++|++|
T Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~~dvA~~v~~l~-s~~~~~~tG~~~  236 (254)
T 1hdc_A          158 VRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLL-SDTSSYVTGAEL  236 (254)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCSTTSCTTSTTSSCB-CHHHHHHHHHHHH-SGGGTTCCSCEE
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEecccCcCccccccchhHHHHHHhcCCCCCCCCCHHHHHHHHHHHh-CchhcCCCCCEE
Confidence            99999999999999999999999999999975432111111122335677788 9999999999999 556779999999


Q ss_pred             EecCCccC
Q 024338          262 TIDGGMVM  269 (269)
Q Consensus       262 ~~dgg~~~  269 (269)
                      .+|||+.+
T Consensus       237 ~vdgG~~~  244 (254)
T 1hdc_A          237 AVDGGWTT  244 (254)
T ss_dssp             EESTTTTT
T ss_pred             EECCCccc
Confidence            99999753

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=100.00  E-value=6.8e-47  Score=317.15  Aligned_cols=243  Identities=37%  Similarity=0.564  Sum_probs=213.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      ++++|++|||||++|||++++++|+++|++|+++ +|+.+  ++..+++...+.++.++.+|++|.++++++++++.+++
T Consensus         1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~-~r~~~--~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   77 (255)
T 2q2v_A            1 TLKGKTALVTGSTSGIGLGIAQVLARAGANIVLN-GFGDP--APALAEIARHGVKAVHHPADLSDVAQIEALFALAEREF   77 (255)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEE-CSSCC--HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE-eCCch--HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            3678999999999999999999999999999885 66654  44556666556778899999999999999999999999


Q ss_pred             CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHH
Q 024338          103 GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAG  182 (269)
Q Consensus       103 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  182 (269)
                      +++|+||||||.....++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.++...|++||++
T Consensus        78 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  157 (255)
T 2q2v_A           78 GGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHG  157 (255)
T ss_dssp             SSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCCCchhHHHHHHH
Confidence            99999999999887778888999999999999999999999999999988888999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC---hHH---H----HHH-HhcCCCCCCCCHHHHHHHHHHhccCC
Q 024338          183 VIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG---EDL---E----KKI-LEKIPLGRYGQPEEVAGLVEFLALNP  251 (269)
Q Consensus       183 l~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~---~~~---~----~~~-~~~~~~~~~~~~~~~a~~~~~l~~~~  251 (269)
                      ++.|+++++.|+++.||+||+|+||+++|++.....   +..   .    ... ....|.+++.+|+|+|++++||+ ++
T Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~-s~  236 (255)
T 2q2v_A          158 VVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELVLFLC-SE  236 (255)
T ss_dssp             HHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTTTCTTCCCBCHHHHHHHHHHHT-SG
T ss_pred             HHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHhccCCCCCCcCHHHHHHHHHHHh-CC
Confidence            999999999999999999999999999999865322   111   1    222 34568888999999999999999 45


Q ss_pred             CCCCccccEEEecCCccC
Q 024338          252 AAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       252 ~~~~~~G~~i~~dgg~~~  269 (269)
                      ++++++|++|.+|||+.+
T Consensus       237 ~~~~~tG~~~~vdgG~~~  254 (255)
T 2q2v_A          237 AGSQVRGAAWNVDGGWLA  254 (255)
T ss_dssp             GGTTCCSCEEEESTTGGG
T ss_pred             ccCCCCCCEEEECCCccC
Confidence            677899999999999863

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=100.00  E-value=5.9e-47  Score=317.05  Aligned_cols=236  Identities=25%  Similarity=0.385  Sum_probs=210.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcC-CcEEEEEccC--CCHHHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASG-GQALTFGGDV--SKEADVESMIKTA   98 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dl--s~~~~~~~~~~~~   98 (269)
                      ..+++|++|||||++|||+++|+.|+++|++|++ .+|+.+.++++.+++.+.+ .++.++.+|+  +|.++++++++++
T Consensus         8 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (252)
T 3f1l_A            8 DLLNDRIILVTGASDGIGREAAMTYARYGATVIL-LGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRI   86 (252)
T ss_dssp             TTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHH
Confidence            4688999999999999999999999999999888 5899988888888887653 3788899999  9999999999999


Q ss_pred             HHhcCCccEEEEccCCC-CCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhH
Q 024338           99 VDAWGTVDILINNAGIT-RDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYS  177 (269)
Q Consensus        99 ~~~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~  177 (269)
                      .+.++++|+||||||+. ...++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|+
T Consensus        87 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~  166 (252)
T 3f1l_A           87 AVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYA  166 (252)
T ss_dssp             HHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCTTCHHHH
T ss_pred             HHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCCCCchhH
Confidence            99999999999999985 44688899999999999999999999999999999988899999999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCcc
Q 024338          178 AAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYIT  257 (269)
Q Consensus       178 ~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~  257 (269)
                      +||+++++|+++++.|+++. |+||+|+||+++|++.....        ...+..++.+|+|+|++++||+ +++++++|
T Consensus       167 asK~a~~~l~~~la~e~~~~-irvn~v~PG~v~t~~~~~~~--------~~~~~~~~~~p~dva~~~~~L~-s~~~~~it  236 (252)
T 3f1l_A          167 ASKFATEGMMQVLADEYQQR-LRVNCINPGGTRTAMRASAF--------PTEDPQKLKTPADIMPLYLWLM-GDDSRRKT  236 (252)
T ss_dssp             HHHHHHHHHHHHHHHHTTTT-CEEEEEECCSBSSHHHHHHC--------TTCCGGGSBCTGGGHHHHHHHH-SGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHHhcCC-cEEEEEecCcccCchhhhhC--------CccchhccCCHHHHHHHHHHHc-CccccCCC
Confidence            99999999999999999887 99999999999998754321        1122234668999999999999 56778999


Q ss_pred             ccEEEecCCcc
Q 024338          258 GQVLTIDGGMV  268 (269)
Q Consensus       258 G~~i~~dgg~~  268 (269)
                      ||+|.+|||+.
T Consensus       237 G~~i~vdgG~~  247 (252)
T 3f1l_A          237 GMTFDAQPGRK  247 (252)
T ss_dssp             SCEEESSCC--
T ss_pred             CCEEEeCCCcC
Confidence            99999999974

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=100.00  E-value=1.4e-47  Score=323.26  Aligned_cols=239  Identities=31%  Similarity=0.491  Sum_probs=209.7

Q ss_pred             ccccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHH
Q 024338           18 NEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKT   97 (269)
Q Consensus        18 ~~~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~   97 (269)
                      ...++++++|++|||||++|||+++|++|+++|++|++ .+|+.+..+           ....+.+|++|.+++++++++
T Consensus        20 ~~~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~-~~r~~~~~~-----------~~~~~~~Dv~~~~~~~~~~~~   87 (266)
T 3uxy_A           20 FQSMQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAV-ADRAVAGIA-----------ADLHLPGDLREAAYADGLPGA   87 (266)
T ss_dssp             ------CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEE-CSSCCTTSC-----------CSEECCCCTTSHHHHHHHHHH
T ss_pred             hhhhhCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEE-EeCCHHHHH-----------hhhccCcCCCCHHHHHHHHHH
Confidence            34467899999999999999999999999999999888 567654321           113458999999999999999


Q ss_pred             HHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhH
Q 024338           98 AVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYS  177 (269)
Q Consensus        98 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~  177 (269)
                      +.+.++++|+||||||+....++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|+
T Consensus        88 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~  167 (266)
T 3uxy_A           88 VAAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPGHALYC  167 (266)
T ss_dssp             HHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCCTTBHHHH
T ss_pred             HHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCChHHH
Confidence            99999999999999999888889999999999999999999999999999999888899999999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC-------hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccC
Q 024338          178 AAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG-------EDLEKKILEKIPLGRYGQPEEVAGLVEFLALN  250 (269)
Q Consensus       178 ~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~  250 (269)
                      +||++++.|+++++.|+++.||+||+|+||+++|++.....       +...+......|++++.+|+|+|++++||+ +
T Consensus       168 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~-s  246 (266)
T 3uxy_A          168 LTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADVVLFLA-S  246 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHH-S
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHh-C
Confidence            99999999999999999999999999999999999764321       223355667789999999999999999999 5


Q ss_pred             CCCCCccccEEEecCCccC
Q 024338          251 PAAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       251 ~~~~~~~G~~i~~dgg~~~  269 (269)
                      +.++++|||+|.+|||+.+
T Consensus       247 ~~~~~itG~~i~vdGG~~~  265 (266)
T 3uxy_A          247 DAARYLCGSLVEVNGGKAV  265 (266)
T ss_dssp             GGGTTCCSCEEEESTTCCC
T ss_pred             chhcCCcCCEEEECcCEeC
Confidence            6778999999999999864

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=100.00  E-value=8.1e-47  Score=318.50  Aligned_cols=245  Identities=22%  Similarity=0.299  Sum_probs=216.5

Q ss_pred             cCCCCCCEEEEeCCC--CchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCC-cEEEEEccCCCHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGAS--RGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGG-QALTFGGDVSKEADVESMIKT   97 (269)
Q Consensus        21 ~~~~~~k~vlItGas--~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dls~~~~~~~~~~~   97 (269)
                      .+++++|++|||||+  +|||+++|++|+++|++|+++ +|+.+..+.+.+...+.+. ++.++.+|++|.+++++++++
T Consensus         2 ~~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   80 (266)
T 3oig_A            2 NFSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFT-YAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFAS   80 (266)
T ss_dssp             CSCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEE-ESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHH
T ss_pred             ccccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEe-cCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHH
Confidence            467899999999999  669999999999999999884 6776544444444444444 789999999999999999999


Q ss_pred             HHHhcCCccEEEEccCCCC----CCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCC
Q 024338           98 AVDAWGTVDILINNAGITR----DTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQ  173 (269)
Q Consensus        98 ~~~~~~~id~li~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~  173 (269)
                      +.+.++++|+||||||+..    ..++.+.+.+++++.+++|+.+++.++++++|.|+  +.|+||++||..+..+.++.
T Consensus        81 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~g~iv~isS~~~~~~~~~~  158 (266)
T 3oig_A           81 IKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMT--EGGSIVTLTYLGGELVMPNY  158 (266)
T ss_dssp             HHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCT--TCEEEEEEECGGGTSCCTTT
T ss_pred             HHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcC--CCceEEEEecccccccCCCc
Confidence            9999999999999999876    46778899999999999999999999999999984  46899999999999999999


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccCh--HHHHHHHhcCCCCCCCCHHHHHHHHHHhccCC
Q 024338          174 ANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGE--DLEKKILEKIPLGRYGQPEEVAGLVEFLALNP  251 (269)
Q Consensus       174 ~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~  251 (269)
                      ..|++||++++.|+++++.|+++.||+|++|+||+++|++......  ...+......|.+++.+|+|+|++++||+ ++
T Consensus       159 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~v~~l~-s~  237 (266)
T 3oig_A          159 NVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPLRRTTTPEEVGDTAAFLF-SD  237 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHH-SG
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHc-CC
Confidence            9999999999999999999999999999999999999998776543  44566677889999999999999999999 55


Q ss_pred             CCCCccccEEEecCCccC
Q 024338          252 AAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       252 ~~~~~~G~~i~~dgg~~~  269 (269)
                      ++.+++|++|.+|||+.+
T Consensus       238 ~~~~~tG~~i~vdGG~~~  255 (266)
T 3oig_A          238 MSRGITGENLHVDSGFHI  255 (266)
T ss_dssp             GGTTCCSCEEEESTTGGG
T ss_pred             chhcCcCCEEEECCCeEE
Confidence            677999999999999863

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=100.00  E-value=1e-46  Score=319.50  Aligned_cols=243  Identities=31%  Similarity=0.488  Sum_probs=210.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecC-CHHHHHHHHHHHHHc-CCcEEEEEccCCCH----HHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYAR-SSKEAEEVCKEIEAS-GGQALTFGGDVSKE----ADVESMI   95 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r-~~~~~~~~~~~l~~~-~~~~~~~~~Dls~~----~~~~~~~   95 (269)
                      .++++|++|||||++|||++++++|+++|++|+++ +| +.+.++++.+++.+. +.++.++.+|++|.    +++++++
T Consensus         7 ~~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   85 (276)
T 1mxh_A            7 EASECPAAVITGGARRIGHSIAVRLHQQGFRVVVH-YRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDII   85 (276)
T ss_dssp             ----CCEEEETTCSSHHHHHHHHHHHHTTCEEEEE-ESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHH
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE-eCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHH
Confidence            34679999999999999999999999999999885 67 888888888888765 67889999999999    9999999


Q ss_pred             HHHHHhcCCccEEEEccCCCCCCcccCCCH-----------HHHHHHHHHHhHHHHHHHHHHHHHHHhCCC------CeE
Q 024338           96 KTAVDAWGTVDILINNAGITRDTLLMRMKK-----------SQWQDVIDLNLTGVFLCTQAAAKIMMKKKK------GRI  158 (269)
Q Consensus        96 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~------~~i  158 (269)
                      +++.+.++++|+||||||+....++.+.+.           ++|++.+++|+.+++.++++++|.|. ++.      ++|
T Consensus        86 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~~~~~~g~i  164 (276)
T 1mxh_A           86 DCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG-EGGAWRSRNLSV  164 (276)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC--------CCCEEE
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHh-cCCCCCCCCcEE
Confidence            999999999999999999877777777888           99999999999999999999999997 555      899


Q ss_pred             EEEcCCccccCCCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCC-CCCH
Q 024338          159 INIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGR-YGQP  237 (269)
Q Consensus       159 v~isS~~~~~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~  237 (269)
                      |++||..+..+.++...|++||++++.|+++++.|+++.||+||+|+||+++|+  ....+...+......|+++ +.+|
T Consensus       165 v~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~--~~~~~~~~~~~~~~~p~~r~~~~~  242 (276)
T 1mxh_A          165 VNLCDAMTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP--PAMPQETQEEYRRKVPLGQSEASA  242 (276)
T ss_dssp             EEECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC--SSSCHHHHHHHHTTCTTTSCCBCH
T ss_pred             EEECchhhcCCCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC--ccCCHHHHHHHHhcCCCCCCCCCH
Confidence            999999999999999999999999999999999999999999999999999999  3334444455556678888 8899


Q ss_pred             HHHHHHHHHhccCCCCCCccccEEEecCCccC
Q 024338          238 EEVAGLVEFLALNPAAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       238 ~~~a~~~~~l~~~~~~~~~~G~~i~~dgg~~~  269 (269)
                      +|+|++++||+ ++.+.+++|++|.+|||+.+
T Consensus       243 ~dva~~v~~l~-s~~~~~~tG~~~~vdgG~~~  273 (276)
T 1mxh_A          243 AQIADAIAFLV-SKDAGYITGTTLKVDGGLIL  273 (276)
T ss_dssp             HHHHHHHHHHH-SGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHHHh-CccccCccCcEEEECCchhc
Confidence            99999999999 45677999999999999863

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=7e-47  Score=317.30  Aligned_cols=239  Identities=36%  Similarity=0.539  Sum_probs=210.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      +++++|++|||||++|||++++++|+++|++|+++ +|+.+. ++..+++.    + .++.+|++|.++++++++++.+.
T Consensus         2 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~-~r~~~~-~~~~~~~~----~-~~~~~D~~~~~~~~~~~~~~~~~   74 (256)
T 2d1y_A            2 GLFAGKGVLVTGGARGIGRAIAQAFAREGALVALC-DLRPEG-KEVAEAIG----G-AFFQVDLEDERERVRFVEEAAYA   74 (256)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ESSTTH-HHHHHHHT----C-EEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEE-eCChhH-HHHHHHhh----C-CEEEeeCCCHHHHHHHHHHHHHH
Confidence            56789999999999999999999999999999885 677665 55655553    4 78899999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKA  181 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  181 (269)
                      ++++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.++...|++||+
T Consensus        75 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  154 (256)
T 2d1y_A           75 LGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKG  154 (256)
T ss_dssp             HSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCChhHHHHHH
Confidence            99999999999988777888999999999999999999999999999998888899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc------ChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCC
Q 024338          182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL------GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGY  255 (269)
Q Consensus       182 al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~  255 (269)
                      +++.|+++++.|+++.||+||+|+||+++|++....      .++..+......|.+++.+|+|+|++++||+ ++.+++
T Consensus       155 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~-s~~~~~  233 (256)
T 2d1y_A          155 GLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLA-SEKASF  233 (256)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHH-SGGGTT
T ss_pred             HHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhhccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh-CchhcC
Confidence            999999999999999999999999999999975432      1222233445568888999999999999999 456678


Q ss_pred             ccccEEEecCCcc
Q 024338          256 ITGQVLTIDGGMV  268 (269)
Q Consensus       256 ~~G~~i~~dgg~~  268 (269)
                      ++|++|.+|||+.
T Consensus       234 ~~G~~~~v~gG~~  246 (256)
T 2d1y_A          234 ITGAILPVDGGMT  246 (256)
T ss_dssp             CCSCEEEESTTGG
T ss_pred             CCCCEEEECCCcc
Confidence            9999999999975

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=7.3e-48  Score=328.28  Aligned_cols=242  Identities=26%  Similarity=0.368  Sum_probs=213.6

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCC---cEEEEecCCHHHHHHHHHHHHHc--CCcEEEEEccCCCHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGC---KVLVNYARSSKEAEEVCKEIEAS--GGQALTFGGDVSKEADVESMI   95 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~---~v~i~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dls~~~~~~~~~   95 (269)
                      +.++++|++|||||++|||+++|++|+++|+   +|++ .+|+.+.++++.+++...  +.++.++.+|++|.+++++++
T Consensus        28 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~  106 (287)
T 3rku_A           28 AERLAKKTVLITGASAGIGKATALEYLEASNGDMKLIL-AARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFI  106 (287)
T ss_dssp             HHHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEE-EESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHH
T ss_pred             hhhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEE-EECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHH
Confidence            4567899999999999999999999999998   7777 689999999998888765  568899999999999999999


Q ss_pred             HHHHHhcCCccEEEEccCCCC-CCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCCh
Q 024338           96 KTAVDAWGTVDILINNAGITR-DTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQA  174 (269)
Q Consensus        96 ~~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~  174 (269)
                      +++.+.++++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++..
T Consensus       107 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~  186 (287)
T 3rku_A          107 ENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGS  186 (287)
T ss_dssp             HTSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCH
T ss_pred             HHHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCCCCCc
Confidence            999999999999999999875 5678899999999999999999999999999999888899999999999999999999


Q ss_pred             hhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC---hH-HHHHHHhcCCCCCCCCHHHHHHHHHHhccC
Q 024338          175 NYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG---ED-LEKKILEKIPLGRYGQPEEVAGLVEFLALN  250 (269)
Q Consensus       175 ~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~  250 (269)
                      .|++||+++++|+++++.|+++.||+||+|+||+++|++.....   .. .........|    .+|+|+|++++||+ +
T Consensus       187 ~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p----~~pedvA~~v~~l~-s  261 (287)
T 3rku_A          187 IYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKDTTP----LMADDVADLIVYAT-S  261 (287)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHHHHHHTTSCC----EEHHHHHHHHHHHH-T
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHHHHHhhcccCC----CCHHHHHHHHHHHh-C
Confidence            99999999999999999999999999999999999999853221   11 1122222223    38999999999999 5


Q ss_pred             CCCCCccccEEEecCCcc
Q 024338          251 PAAGYITGQVLTIDGGMV  268 (269)
Q Consensus       251 ~~~~~~~G~~i~~dgg~~  268 (269)
                      +.+.+++||++.+|+|..
T Consensus       262 ~~~~~i~g~~i~v~~g~~  279 (287)
T 3rku_A          262 RKQNTVIADTLIFPTNQA  279 (287)
T ss_dssp             SCTTEEEEEEEEEETTEE
T ss_pred             CCCCeEecceEEeeCCCC
Confidence            567799999999999864

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=4.3e-47  Score=319.80  Aligned_cols=240  Identities=34%  Similarity=0.572  Sum_probs=211.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      .++++|++|||||++|||++++++|+++|++|++ .+|+.+.++++.+++   ..++.++.+|++|.++++++++++.+.
T Consensus         2 ~~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~-~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~   77 (263)
T 2a4k_A            2 GRLSGKTILVTGAASGIGRAALDLFAREGASLVA-VDREERLLAEAVAAL---EAEAIAVVADVSDPKAVEAVFAEALEE   77 (263)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHTC---CSSEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHh---cCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999988 478887776665554   357889999999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKA  181 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  181 (269)
                      ++++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.| ++ .++||++||..+. +.++...|++||+
T Consensus        78 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~-~g~iv~isS~~~~-~~~~~~~Y~asK~  154 (263)
T 2a4k_A           78 FGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL-EE-GGSLVLTGSVAGL-GAFGLAHYAAGKL  154 (263)
T ss_dssp             HSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHC-CT-TCEEEEECCCTTC-CHHHHHHHHHCSS
T ss_pred             cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hc-CCEEEEEecchhc-CCCCcHHHHHHHH
Confidence            9999999999998877788889999999999999999999999999999 54 7999999999998 7788899999999


Q ss_pred             HHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEE
Q 024338          182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL  261 (269)
Q Consensus       182 al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i  261 (269)
                      +++.|+++++.|+++.||+|++|+||+++|++.....+...+......|.+++.+|+|+|++++||+ ++++++++|++|
T Consensus       155 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~-s~~~~~~tG~~i  233 (263)
T 2a4k_A          155 GVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGASPLGRAGRPEEVAQAALFLL-SEESAYITGQAL  233 (263)
T ss_dssp             HHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHHHHHHHHHTSTTCSCBCHHHHHHHHHHHH-SGGGTTCCSCEE
T ss_pred             HHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh-CccccCCcCCEE
Confidence            9999999999999999999999999999999877655554455566778888999999999999999 556789999999


Q ss_pred             EecCCccC
Q 024338          262 TIDGGMVM  269 (269)
Q Consensus       262 ~~dgg~~~  269 (269)
                      .+|||+.+
T Consensus       234 ~vdgG~~~  241 (263)
T 2a4k_A          234 YVDGGRSI  241 (263)
T ss_dssp             EESTTTTT
T ss_pred             EECCCccc
Confidence            99999753

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=100.00  E-value=7.3e-47  Score=316.48  Aligned_cols=238  Identities=21%  Similarity=0.290  Sum_probs=196.1

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      .+++++|++|||||++|||+++|++|+++|++|++ .+|+.+.++++.+++++.+.++.++.+|++|.++++++++++.+
T Consensus         2 ~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (252)
T 3h7a_A            2 SLTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFA-GRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADA   80 (252)
T ss_dssp             ---CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEE-EESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHh
Confidence            35788999999999999999999999999999888 58899889999999988888999999999999999999999999


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhH
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                      . +++|+||||||+....++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|++||
T Consensus        81 ~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  159 (252)
T 3h7a_A           81 H-APLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASAK  159 (252)
T ss_dssp             H-SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCTTCHHHHHHH
T ss_pred             h-CCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCCCCccHHHHH
Confidence            9 999999999999888889999999999999999999999999999999888889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCeEE-EEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCcccc
Q 024338          181 AGVIGLTKTVAKEYASRNINV-NAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQ  259 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v-~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~  259 (269)
                      +++++|+++++.|+++.||+| |+|+||+++|++.....+...+......|.+ +.+|+|+|++++||++++. +..+||
T Consensus       160 aa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~-~~~pedvA~~~~~l~s~~~-~~~~~~  237 (252)
T 3h7a_A          160 FGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERREQMFGKDALANPDL-LMPPAAVAGAYWQLYQQPK-SAWTFE  237 (252)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEEC----------------------------CCHHHHHHHHHHHHHCCG-GGBCSE
T ss_pred             HHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccchhhhhhhhhcCCcc-CCCHHHHHHHHHHHHhCch-hcceee
Confidence            999999999999999999999 9999999999998766555444455556666 8899999999999996554 466787


Q ss_pred             EEE
Q 024338          260 VLT  262 (269)
Q Consensus       260 ~i~  262 (269)
                      +..
T Consensus       238 i~~  240 (252)
T 3h7a_A          238 MEI  240 (252)
T ss_dssp             EEE
T ss_pred             EEe
Confidence            754

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=100.00  E-value=1.7e-46  Score=316.06  Aligned_cols=243  Identities=37%  Similarity=0.580  Sum_probs=215.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      +++++|++|||||++|||++++++|+++|++|++ .+|+.+.++++.+++.   .++.++.+|++|.++++++++++.++
T Consensus         8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~-~~r~~~~~~~~~~~~~---~~~~~~~~D~~d~~~v~~~~~~~~~~   83 (263)
T 3ak4_A            8 FDLSGRKAIVTGGSKGIGAAIARALDKAGATVAI-ADLDVMAAQAVVAGLE---NGGFAVEVDVTKRASVDAAMQKAIDA   83 (263)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHTCT---TCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHh---cCCeEEEEeCCCHHHHHHHHHHHHHH
Confidence            5678999999999999999999999999999888 4788877766655442   26778999999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCeEEEEcCCccccCCCCChhhHHhH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK-KGRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                      ++++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|.+++ .++||++||..+..+.++...|++||
T Consensus        84 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  163 (263)
T 3ak4_A           84 LGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASK  163 (263)
T ss_dssp             HTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCCCchhHHHHH
Confidence            99999999999988777888899999999999999999999999999998776 79999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC-----------hHHHHHHHhcCCCCCCCCHHHHHHHHHHhcc
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG-----------EDLEKKILEKIPLGRYGQPEEVAGLVEFLAL  249 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~  249 (269)
                      ++++.|+++++.|+++.||+|++|+||+++|++.....           +...+......|.+++.+|+|+|++++||+ 
T Consensus       164 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~-  242 (263)
T 3ak4_A          164 FAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVVVFLA-  242 (263)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTCTTCSCBCHHHHHHHHHHHH-
T ss_pred             HHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh-
Confidence            99999999999999999999999999999999764321           222334455678888999999999999999 


Q ss_pred             CCCCCCccccEEEecCCccC
Q 024338          250 NPAAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       250 ~~~~~~~~G~~i~~dgg~~~  269 (269)
                      ++++++++|++|.+|||+.+
T Consensus       243 s~~~~~~tG~~~~vdgG~~~  262 (263)
T 3ak4_A          243 SDAARFMTGQGINVTGGVRM  262 (263)
T ss_dssp             SGGGTTCCSCEEEESSSSSC
T ss_pred             CccccCCCCCEEEECcCEeC
Confidence            55677999999999999864

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=100.00  E-value=1.5e-46  Score=313.74  Aligned_cols=243  Identities=45%  Similarity=0.713  Sum_probs=201.9

Q ss_pred             ccccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHH
Q 024338           18 NEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKT   97 (269)
Q Consensus        18 ~~~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~   97 (269)
                      .....++++|++|||||++|||+++|+.|+++|++|++ .+|+.+.++++.+++   ..++.++.+|+++.+++++++++
T Consensus         6 ~~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~-~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~   81 (249)
T 3f9i_A            6 HHHMIDLTGKTSLITGASSGIGSAIARLLHKLGSKVII-SGSNEEKLKSLGNAL---KDNYTIEVCNLANKEECSNLISK   81 (249)
T ss_dssp             ---CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHH---CSSEEEEECCTTSHHHHHHHHHT
T ss_pred             ccccccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEE-EcCCHHHHHHHHHHh---ccCccEEEcCCCCHHHHHHHHHh
Confidence            34457789999999999999999999999999999888 588888888777766   35788999999999998887764


Q ss_pred             HHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhH
Q 024338           98 AVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYS  177 (269)
Q Consensus        98 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~  177 (269)
                          ++++|+||||||.....++.+.+.+++++.+++|+.+++.++++++|.|.+++.++||++||..+..+.++...|+
T Consensus        82 ----~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  157 (249)
T 3f9i_A           82 ----TSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYC  157 (249)
T ss_dssp             ----CSCCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCSCSHHHH
T ss_pred             ----cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCCCCchhH
Confidence                3789999999998877777788899999999999999999999999999888889999999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCcc
Q 024338          178 AAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYIT  257 (269)
Q Consensus       178 ~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~  257 (269)
                      +||++++.|+++++.|++++||++++|+||+++|++.....+...+......+.+++.+|+|+|++++||+ ++++.+++
T Consensus       158 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~-s~~~~~~t  236 (249)
T 3f9i_A          158 ASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNEKQREAIVQKIPLGTYGIPEDVAYAVAFLA-SNNASYIT  236 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CCHHHHHHHHHHCTTCSCBCHHHHHHHHHHHH-SGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHc-CCccCCcc
Confidence            99999999999999999999999999999999999988887777777888899999999999999999999 55677999


Q ss_pred             ccEEEecCCccC
Q 024338          258 GQVLTIDGGMVM  269 (269)
Q Consensus       258 G~~i~~dgg~~~  269 (269)
                      ||+|.+|||+++
T Consensus       237 G~~~~vdgG~~~  248 (249)
T 3f9i_A          237 GQTLHVNGGMLM  248 (249)
T ss_dssp             SCEEEESTTSSC
T ss_pred             CcEEEECCCEee
Confidence            999999999975

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=100.00  E-value=2.4e-46  Score=318.00  Aligned_cols=244  Identities=15%  Similarity=0.221  Sum_probs=214.7

Q ss_pred             cCCCCCCEEEEeCCC--CchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGAS--RGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTA   98 (269)
Q Consensus        21 ~~~~~~k~vlItGas--~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~   98 (269)
                      |.++++|++|||||+  +|||+++|++|+++|++|+++ +|+.  .++..+++.+...++.++.+|++|.++++++++++
T Consensus        21 M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~-~r~~--~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~   97 (280)
T 3nrc_A           21 MGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFT-YVGQ--FKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVEL   97 (280)
T ss_dssp             -CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEE-ECTT--CHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEe-eCch--HHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHH
Confidence            457899999999998  779999999999999998885 6665  33444555555556889999999999999999999


Q ss_pred             HHhcCCccEEEEccCCCCC----CcccC-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCC
Q 024338           99 VDAWGTVDILINNAGITRD----TLLMR-MKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQ  173 (269)
Q Consensus        99 ~~~~~~id~li~~ag~~~~----~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~  173 (269)
                      .+.++++|+||||||+...    .++.+ .+.+++++.+++|+.+++.++++++|.|.++ .++||++||..+..+.++.
T Consensus        98 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~  176 (280)
T 3nrc_A           98 GKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNR-NASMVALTYIGAEKAMPSY  176 (280)
T ss_dssp             HHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-TCEEEEEECGGGTSCCTTT
T ss_pred             HHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCeEEEEeccccccCCCCc
Confidence            9999999999999998754    44445 8999999999999999999999999999654 7999999999999999999


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC--hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCC
Q 024338          174 ANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG--EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNP  251 (269)
Q Consensus       174 ~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~  251 (269)
                      ..|++||+|++.|+++++.|++++||+|++|+||+++|++.....  +...+......|.+++.+|+|+|++++||+ ++
T Consensus       177 ~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~pedvA~~v~~l~-s~  255 (280)
T 3nrc_A          177 NTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPLKKNVDIMEVGNTVAFLC-SD  255 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTHHHHHHHHHHHSTTCSCCCHHHHHHHHHHTT-SG
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh-Cc
Confidence            999999999999999999999999999999999999999887654  345566677789999999999999999999 56


Q ss_pred             CCCCccccEEEecCCccC
Q 024338          252 AAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       252 ~~~~~~G~~i~~dgg~~~  269 (269)
                      ++.++||++|.+|||+.+
T Consensus       256 ~~~~~tG~~i~vdgG~~~  273 (280)
T 3nrc_A          256 MATGITGEVVHVDAGYHC  273 (280)
T ss_dssp             GGTTCCSCEEEESTTGGG
T ss_pred             ccCCcCCcEEEECCCccc
Confidence            778999999999999863

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=3.7e-47  Score=317.89  Aligned_cols=238  Identities=26%  Similarity=0.420  Sum_probs=207.2

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHc--C-CcEEEEEccCCCHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS--G-GQALTFGGDVSKEADVESMIKT   97 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~--~-~~~~~~~~Dls~~~~~~~~~~~   97 (269)
                      .+++++|++|||||++|||+++|++|+++|++|++ .+|+.+.++++.+++.+.  + .++.++.+|++|.+++++++++
T Consensus         2 ~~~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   80 (250)
T 3nyw_A            2 SLEKQKGLAIITGASQGIGAVIAAGLATDGYRVVL-IARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKD   80 (250)
T ss_dssp             ---CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEE-EESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHH
Confidence            35678999999999999999999999999999888 589999998888888765  3 6788999999999999999999


Q ss_pred             HHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhH
Q 024338           98 AVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYS  177 (269)
Q Consensus        98 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~  177 (269)
                      +.++++++|+||||||+....++ +.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|+
T Consensus        81 ~~~~~g~iD~lvnnAg~~~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  159 (250)
T 3nyw_A           81 IHQKYGAVDILVNAAAMFMDGSL-SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGIYG  159 (250)
T ss_dssp             HHHHHCCEEEEEECCCCCCCCCC-SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------CCTTHHH
T ss_pred             HHHhcCCCCEEEECCCcCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCCCCCcchH
Confidence            99999999999999999877777 78899999999999999999999999999888889999999999999777799999


Q ss_pred             HhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCcc
Q 024338          178 AAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYIT  257 (269)
Q Consensus       178 ~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~  257 (269)
                      +||+++++|+++++.|+++.||+||+|+||+++|++.....        ...+.+++.+|+|+|++++||++++...+++
T Consensus       160 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~--------~~~~~~~~~~p~dva~~v~~l~s~~~~~~~~  231 (250)
T 3nyw_A          160 STKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKKAG--------TPFKDEEMIQPDDLLNTIRCLLNLSENVCIK  231 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHTT--------CCSCGGGSBCHHHHHHHHHHHHTSCTTEECC
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhhhcC--------CCcccccCCCHHHHHHHHHHHHcCCCceEee
Confidence            99999999999999999999999999999999999765332        2345566779999999999999878888899


Q ss_pred             ccEEEecCCcc
Q 024338          258 GQVLTIDGGMV  268 (269)
Q Consensus       258 G~~i~~dgg~~  268 (269)
                      +.+|.+|||..
T Consensus       232 ~~~i~vd~~~~  242 (250)
T 3nyw_A          232 DIVFEMKKSII  242 (250)
T ss_dssp             EEEEEEHHHHH
T ss_pred             EEEEEeecccc
Confidence            99999999853

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=2.8e-47  Score=324.61  Aligned_cols=242  Identities=29%  Similarity=0.451  Sum_probs=209.8

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCC------------HHHHHHHHHHHHHcCCcEEEEEccCCCH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARS------------SKEAEEVCKEIEASGGQALTFGGDVSKE   88 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~------------~~~~~~~~~~l~~~~~~~~~~~~Dls~~   88 (269)
                      +++++||++|||||++|||+++|++|+++|++|+++ +|+            .+.+++...++...+.++.++.+|++|.
T Consensus         5 m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   83 (287)
T 3pxx_A            5 MGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILF-DICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDR   83 (287)
T ss_dssp             CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCH
T ss_pred             ccccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEE-cccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCH
Confidence            567899999999999999999999999999999885 555            6777777778877788999999999999


Q ss_pred             HHHHHHHHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcccc
Q 024338           89 ADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLV  168 (269)
Q Consensus        89 ~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~  168 (269)
                      ++++++++++.+.++++|+||||||+....  .+.+.++|++.+++|+.+++.++++++|.|  ++.++||++||..+..
T Consensus        84 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~--~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~--~~~g~iv~isS~~~~~  159 (287)
T 3pxx_A           84 AAVSRELANAVAEFGKLDVVVANAGICPLG--AHLPVQAFADAFDVDFVGVINTVHAALPYL--TSGASIITTGSVAGLI  159 (287)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCC--TTCCTHHHHHHHHHHTHHHHHHHHHHGGGC--CTTCEEEEECCHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCcCccc--CcCCHHHHHHHhhhhhhhhHHHHHHHHHHh--hcCcEEEEeccchhcc
Confidence            999999999999999999999999987654  337889999999999999999999999998  5678999999998876


Q ss_pred             CC-----------CCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC-----------hHHHHH--
Q 024338          169 GN-----------IGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG-----------EDLEKK--  224 (269)
Q Consensus       169 ~~-----------~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~-----------~~~~~~--  224 (269)
                      +.           ++...|++||++++.|+++++.|++++||+||+|+||+++|++.+...           +...+.  
T Consensus       160 ~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (287)
T 3pxx_A          160 AAAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALL  239 (287)
T ss_dssp             HHHCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHH
T ss_pred             cccccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccccccchhHHHHh
Confidence            65           667889999999999999999999999999999999999999875321           011111  


Q ss_pred             ---HHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEEEecCCccC
Q 024338          225 ---ILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       225 ---~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg~~~  269 (269)
                         .....| +++.+|+|+|++++||+ +++++++|||+|.+|||+++
T Consensus       240 ~~~~~~~~~-~~~~~p~dva~~v~fL~-s~~a~~itG~~i~vdGG~~~  285 (287)
T 3pxx_A          240 AFPAMQAMP-TPYVEASDISNAVCFLA-SDESRYVTGLQFKVDAGAML  285 (287)
T ss_dssp             HGGGGCSSS-CSCBCHHHHHHHHHHHH-SGGGTTCCSCEEEESTTGGG
T ss_pred             hhhhhcccC-CCCCCHHHHHhhHheec-chhhcCCCCceEeECchhhh
Confidence               122334 77889999999999999 56788999999999999864

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=100.00  E-value=7.4e-47  Score=316.60  Aligned_cols=241  Identities=30%  Similarity=0.412  Sum_probs=214.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      .++++|++|||||++|||++++++|+++|++|++ .+|+.+.++++.+++   +.++.++.+|++|.++++++++++.+.
T Consensus         2 ~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~-~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~   77 (253)
T 1hxh_A            2 NRLQGKVALVTGGASGVGLEVVKLLLGEGAKVAF-SDINEAAGQQLAAEL---GERSMFVRHDVSSEADWTLVMAAVQRR   77 (253)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEE-ECSCHHHHHHHHHHH---CTTEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHc---CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999888 588888877777666   567889999999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKA  181 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  181 (269)
                      ++++|+||||||.....++.+.+.++|++.+++|+.+++.+++.++|.|++++ ++||++||..+..+.++...|++||+
T Consensus        78 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~~sK~  156 (253)
T 1hxh_A           78 LGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSASKA  156 (253)
T ss_dssp             HCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCCCCCCccHHHHHH
Confidence            99999999999988777888999999999999999999999999999997766 99999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccC--CeEEEEEecCCccCCcccc-cChHHHHH-HHh---cCCCCCCCCHHHHHHHHHHhccCCCCC
Q 024338          182 GVIGLTKTVAKEYASR--NINVNAIAPGFIASDMTAK-LGEDLEKK-ILE---KIPLGRYGQPEEVAGLVEFLALNPAAG  254 (269)
Q Consensus       182 al~~~~~~la~e~~~~--gi~v~~v~pG~v~t~~~~~-~~~~~~~~-~~~---~~~~~~~~~~~~~a~~~~~l~~~~~~~  254 (269)
                      +++.|+++++.|+++.  ||+|++|+||+++|++... ..+...+. ...   ..|.+++.+|+|+|++++||+ +++++
T Consensus       157 a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~-s~~~~  235 (253)
T 1hxh_A          157 AVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLA-SDESS  235 (253)
T ss_dssp             HHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHHHHHHHHHHHH-SGGGT
T ss_pred             HHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccchhhhHHHHhhhhccCccCCCCCHHHHHHHHHHHc-Ccccc
Confidence            9999999999999988  9999999999999997643 11111122 333   457788889999999999999 55677


Q ss_pred             CccccEEEecCCcc
Q 024338          255 YITGQVLTIDGGMV  268 (269)
Q Consensus       255 ~~~G~~i~~dgg~~  268 (269)
                      +++|++|.+|||+.
T Consensus       236 ~~tG~~~~vdgG~~  249 (253)
T 1hxh_A          236 VMSGSELHADNSIL  249 (253)
T ss_dssp             TCCSCEEEESSSCT
T ss_pred             CCCCcEEEECCCcc
Confidence            99999999999975

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=100.00  E-value=4.1e-46  Score=309.98  Aligned_cols=244  Identities=82%  Similarity=1.224  Sum_probs=223.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTV  105 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i  105 (269)
                      ||++|||||++|||++++++|+++|++|+++..|+.+..+++.++++..+.++.++.+|++|.++++++++++.+.++++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI   80 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999998866889888888888887767789999999999999999999999999999


Q ss_pred             cEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHHHH
Q 024338          106 DILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIG  185 (269)
Q Consensus       106 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~  185 (269)
                      |+||||||.....++.+.+.+++++.+++|+.+++.+++.++|.|.+++.++||++||..+..+.++...|++||++++.
T Consensus        81 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (244)
T 1edo_A           81 DVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIG  160 (244)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCCCCccchhhHHHHHH
Confidence            99999999887777888999999999999999999999999999988788999999999999999999999999999999


Q ss_pred             HHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEEEecC
Q 024338          186 LTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDG  265 (269)
Q Consensus       186 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dg  265 (269)
                      |+++++.|+++.||++++|+||+++|++.....+..........|.+++.+|+|+|+++++|+.++...+++|++|.+||
T Consensus       161 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~g  240 (244)
T 1edo_A          161 FSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQAFTIDG  240 (244)
T ss_dssp             HHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHHHHHHHTSCTTCSCBCHHHHHHHHHHHHHCSGGGGCCSCEEEEST
T ss_pred             HHHHHHHHhhhcCCEEEEEeeCccccchhhhcChHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCccCCcCCCEEEeCC
Confidence            99999999999999999999999999987766555555566677888899999999999999866677889999999999


Q ss_pred             CccC
Q 024338          266 GMVM  269 (269)
Q Consensus       266 g~~~  269 (269)
                      |+.+
T Consensus       241 G~~~  244 (244)
T 1edo_A          241 GIAI  244 (244)
T ss_dssp             TTTC
T ss_pred             CccC
Confidence            9864

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=100.00  E-value=3.4e-46  Score=315.76  Aligned_cols=242  Identities=36%  Similarity=0.613  Sum_probs=209.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      ++|++|||||++|||+++|++|+++|++|+++..|+.+..+++.+++.+.+.++.++.+|++|.++++++++++.+.+++
T Consensus        25 ~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  104 (272)
T 4e3z_A           25 DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFGR  104 (272)
T ss_dssp             CSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            57999999999999999999999999999887789999999999998888889999999999999999999999999999


Q ss_pred             ccEEEEccCCCCC-CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC---CCCeEEEEcCCccccCCC-CChhhHHh
Q 024338          105 VDILINNAGITRD-TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKK---KKGRIINIASVVGLVGNI-GQANYSAA  179 (269)
Q Consensus       105 id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~---~~~~iv~isS~~~~~~~~-~~~~Y~~s  179 (269)
                      +|+||||||+... .++.+.+.+++++.+++|+.+++.+++.++|.|.+.   +.++||++||..+..+.+ +...|++|
T Consensus       105 id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~as  184 (272)
T 4e3z_A          105 LDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYAAS  184 (272)
T ss_dssp             CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTTTCHHHHHH
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCCCcchhHHH
Confidence            9999999998765 778899999999999999999999999999999652   578999999999988776 67889999


Q ss_pred             HHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc-ChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccc
Q 024338          180 KAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL-GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITG  258 (269)
Q Consensus       180 K~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G  258 (269)
                      |++++.|+++++.|+++.||+|++|+||+++|++.... .+..........+.+++.+|+|+|++++||+ ++...+++|
T Consensus       185 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~-s~~~~~~tG  263 (272)
T 4e3z_A          185 KAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLPDRAREMAPSVPMQRAGMPEEVADAILYLL-SPSASYVTG  263 (272)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBC------------------CCTTSSCBCHHHHHHHHHHHH-SGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCChHHHHHHhhcCCcCCCcCHHHHHHHHHHHh-CCccccccC
Confidence            99999999999999999999999999999999986542 2334445566778888899999999999999 556779999


Q ss_pred             cEEEecCCc
Q 024338          259 QVLTIDGGM  267 (269)
Q Consensus       259 ~~i~~dgg~  267 (269)
                      ++|.+|||+
T Consensus       264 ~~i~vdgG~  272 (272)
T 4e3z_A          264 SILNVSGGR  272 (272)
T ss_dssp             CEEEESTTC
T ss_pred             CEEeecCCC
Confidence            999999995

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.4e-46  Score=312.76  Aligned_cols=236  Identities=22%  Similarity=0.327  Sum_probs=207.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcC--CcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAG--CKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G--~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      ||++|||||++|||+++|++|+++|  +.|++ ..|+.+.++++.+++   +.++.++.+|++|.++++++++++.++++
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~-~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   77 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYG-VARSEAPLKKLKEKY---GDRFFYVVGDITEDSVLKQLVNAAVKGHG   77 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEE-EESCHHHHHHHHHHH---GGGEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEE-ecCCHHHHHHHHHHh---CCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            6999999999999999999999996  56655 688888887777665   46789999999999999999999999999


Q ss_pred             CccEEEEccCCCCC-CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHH
Q 024338          104 TVDILINNAGITRD-TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAG  182 (269)
Q Consensus       104 ~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  182 (269)
                      ++|+||||||.... .++.+.+.++|++.+++|+.+++.++++++|.|++++ |+||++||..+..+.++...|++||++
T Consensus        78 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a  156 (254)
T 3kzv_A           78 KIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNMYFSSWGAYGSSKAA  156 (254)
T ss_dssp             CCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCCSSCCSHHHHHHHHH
T ss_pred             CccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhccCCCCcchHHHHHHH
Confidence            99999999998544 7888999999999999999999999999999997755 999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhccCCeEEEEEecCCccCCccccc---------ChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCC
Q 024338          183 VIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL---------GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAA  253 (269)
Q Consensus       183 l~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~  253 (269)
                      ++.|+++++.|+  .||+||+|+||+++|++....         .++..+.+....|.+++.+|+|+|++++||++++.+
T Consensus       157 ~~~~~~~la~e~--~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~dva~~v~~L~s~~~~  234 (254)
T 3kzv_A          157 LNHFAMTLANEE--RQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSSVPATVYAKLALHGIP  234 (254)
T ss_dssp             HHHHHHHHHHHC--TTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHTTC----CHHHHHHHHHHHHHCCC
T ss_pred             HHHHHHHHHhhc--cCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHhcCCcCCcccHHHHHHHHHhhccc
Confidence            999999999998  689999999999999987543         244556666778999999999999999999954324


Q ss_pred             CCccccEEEecCCcc
Q 024338          254 GYITGQVLTIDGGMV  268 (269)
Q Consensus       254 ~~~~G~~i~~dgg~~  268 (269)
                      +++|||+|.+|||.+
T Consensus       235 ~~itG~~i~vdg~~~  249 (254)
T 3kzv_A          235 DGVNGQYLSYNDPAL  249 (254)
T ss_dssp             GGGTTCEEETTCGGG
T ss_pred             CCCCccEEEecCccc
Confidence            899999999999864

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=100.00  E-value=5.7e-47  Score=320.87  Aligned_cols=235  Identities=27%  Similarity=0.409  Sum_probs=205.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHH-------HHHHHHHHHHHcCCcEEEEEccCCCHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSK-------EAEEVCKEIEASGGQALTFGGDVSKEADVESM   94 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~-------~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~   94 (269)
                      +++++|++|||||++|||+++|++|+++|++|+++ +|+.+       .+++..+++...+.++.++.+|++|.++++++
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   80 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIA-AKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAA   80 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEE-eccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHH
Confidence            57899999999999999999999999999999885 66543       25666777777788999999999999999999


Q ss_pred             HHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccC--CCC
Q 024338           95 IKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVG--NIG  172 (269)
Q Consensus        95 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~--~~~  172 (269)
                      ++++.++++++|+||||||+....++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+  .++
T Consensus        81 ~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~  160 (274)
T 3e03_A           81 VAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGA  160 (274)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHHHHH
T ss_pred             HHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCCC
Confidence            999999999999999999998888889999999999999999999999999999998888899999999999888  678


Q ss_pred             ChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecC-CccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCC
Q 024338          173 QANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG-FIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNP  251 (269)
Q Consensus       173 ~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~  251 (269)
                      ...|++||+++++|+++++.|++++||+||+|+|| +++|++.+...         ..+..++.+|+|+|++++||+ ++
T Consensus       161 ~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~~~~---------~~~~~~~~~pedvA~~v~~l~-s~  230 (274)
T 3e03_A          161 HTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAINMLP---------GVDAAACRRPEIMADAAHAVL-TR  230 (274)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC----------------CCCGGGSBCTHHHHHHHHHHH-TS
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhhhcc---------cccccccCCHHHHHHHHHHHh-Cc
Confidence            89999999999999999999999999999999999 69999763221         223344668999999999999 56


Q ss_pred             CCCCccccEEEecCCcc
Q 024338          252 AAGYITGQVLTIDGGMV  268 (269)
Q Consensus       252 ~~~~~~G~~i~~dgg~~  268 (269)
                      +++++|||+| +|+|++
T Consensus       231 ~~~~itG~~i-~~~g~~  246 (274)
T 3e03_A          231 EAAGFHGQFL-IDDEVL  246 (274)
T ss_dssp             CCTTCCSCEE-EHHHHH
T ss_pred             cccccCCeEE-EcCcch
Confidence            7789999999 787753

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=1.1e-46  Score=320.78  Aligned_cols=238  Identities=23%  Similarity=0.347  Sum_probs=212.6

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHH-------HHHHHHHHHHHcCCcEEEEEccCCCHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSK-------EAEEVCKEIEASGGQALTFGGDVSKEADVES   93 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~-------~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~   93 (269)
                      .|++++|++|||||++|||+++|++|+++|++|+++ +|+.+       .+++..+++...+.++.++.+|++|.+++++
T Consensus         4 ~m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   82 (285)
T 3sc4_A            4 SMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALV-AKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAA   82 (285)
T ss_dssp             --CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEE-ESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE-ECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence            467899999999999999999999999999999885 66654       4666777777778899999999999999999


Q ss_pred             HHHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCC-CC
Q 024338           94 MIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGN-IG  172 (269)
Q Consensus        94 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~-~~  172 (269)
                      +++++.++++++|+||||||+....++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+. ++
T Consensus        83 ~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~  162 (285)
T 3sc4_A           83 AVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLR  162 (285)
T ss_dssp             HHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGGSC
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCCCC
Confidence            99999999999999999999988888999999999999999999999999999999988888999999999998886 78


Q ss_pred             ChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecC-CccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCC
Q 024338          173 QANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG-FIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNP  251 (269)
Q Consensus       173 ~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~  251 (269)
                      ...|++||+++++|+++++.|++++||+||+|+|| +++|++....       .....+++++.+|+|+|++++||++ +
T Consensus       163 ~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~~~~~-------~~~~~~~~r~~~pedvA~~~~~l~s-~  234 (285)
T 3sc4_A          163 PTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQNL-------LGGDEAMARSRKPEVYADAAYVVLN-K  234 (285)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHHHHHH-------HTSCCCCTTCBCTHHHHHHHHHHHT-S
T ss_pred             CchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHHHHhh-------ccccccccCCCCHHHHHHHHHHHhC-C
Confidence            89999999999999999999999999999999999 6888864321       2234567888899999999999995 4


Q ss_pred             CCCCccccEEEecCCcc
Q 024338          252 AAGYITGQVLTIDGGMV  268 (269)
Q Consensus       252 ~~~~~~G~~i~~dgg~~  268 (269)
                      .+ ++|||+|.+|||+.
T Consensus       235 ~~-~~tG~~i~~dgg~~  250 (285)
T 3sc4_A          235 PS-SYTGNTLLCEDVLL  250 (285)
T ss_dssp             CT-TCCSCEEEHHHHHH
T ss_pred             cc-cccceEEEEcCchh
Confidence            55 99999999999863

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=100.00  E-value=1e-45  Score=314.90  Aligned_cols=251  Identities=51%  Similarity=0.811  Sum_probs=223.5

Q ss_pred             cccccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHH
Q 024338           17 TNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIK   96 (269)
Q Consensus        17 ~~~~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~   96 (269)
                      +....+++++|++|||||++|||+++++.|+++|++|++ .+|+++.++++.++++..+.++.++.+|++|.++++++++
T Consensus        35 ~~~~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~  113 (285)
T 2c07_A           35 KENYYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVIC-ISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVIN  113 (285)
T ss_dssp             CCCCCCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEE-EESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             cccccccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEE-EcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHH
Confidence            334456788999999999999999999999999999988 6888888888888887767789999999999999999999


Q ss_pred             HHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhh
Q 024338           97 TAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANY  176 (269)
Q Consensus        97 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y  176 (269)
                      ++.+.++++|+||||||.....++.+.+.+++++.+++|+.+++.+++.++|.|.+++.++||++||..+..+.++...|
T Consensus       114 ~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y  193 (285)
T 2c07_A          114 KILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANY  193 (285)
T ss_dssp             HHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHH
T ss_pred             HHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCCchH
Confidence            99999999999999999887778888999999999999999999999999999987778999999999999999999999


Q ss_pred             HHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCc
Q 024338          177 SAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYI  256 (269)
Q Consensus       177 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~  256 (269)
                      ++||++++.|+++++.|+++.||++++|+||+++|++.....+...+......|.+++.+|+|+|+++++|+ ++++.++
T Consensus       194 ~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~-~~~~~~~  272 (285)
T 2c07_A          194 SSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNIISNIPAGRMGTPEEVANLACFLS-SDKSGYI  272 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHH-SGGGTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcCHHHHHHHHhhCCCCCCCCHHHHHHHHHHHh-CCCcCCC
Confidence            999999999999999999999999999999999999877655555555566678888999999999999999 4566789


Q ss_pred             cccEEEecCCccC
Q 024338          257 TGQVLTIDGGMVM  269 (269)
Q Consensus       257 ~G~~i~~dgg~~~  269 (269)
                      +|++|.+|||+.+
T Consensus       273 ~G~~i~v~gG~~~  285 (285)
T 2c07_A          273 NGRVFVIDGGLSP  285 (285)
T ss_dssp             CSCEEEESTTSCC
T ss_pred             CCCEEEeCCCccC
Confidence            9999999999865

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=3.8e-46  Score=316.30  Aligned_cols=243  Identities=31%  Similarity=0.498  Sum_probs=203.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHH---HcCCcEEEEEccCCCHHHHHHHHHHHH
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIE---ASGGQALTFGGDVSKEADVESMIKTAV   99 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~---~~~~~~~~~~~Dls~~~~~~~~~~~~~   99 (269)
                      ++++|++|||||++|||++++++|+++|++|++ ..|+++.++++.+++.   ..+.++.++.+|++|.++++++++++.
T Consensus         3 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   81 (278)
T 1spx_A            3 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTI-TGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTL   81 (278)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHH
Confidence            578999999999999999999999999999888 4788888888877773   234578899999999999999999999


Q ss_pred             HhcCCccEEEEccCCCCCCcccCC----CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcc-ccCCCCCh
Q 024338          100 DAWGTVDILINNAGITRDTLLMRM----KKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVG-LVGNIGQA  174 (269)
Q Consensus       100 ~~~~~id~li~~ag~~~~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~-~~~~~~~~  174 (269)
                      +.++++|+||||||.....++.+.    +.++|++.+++|+.+++.++++++|.|++++ ++||++||..+ ..+.++..
T Consensus        82 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~  160 (278)
T 1spx_A           82 GKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPDFP  160 (278)
T ss_dssp             HHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCTTSH
T ss_pred             HHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccCCCCcc
Confidence            999999999999998766677777    9999999999999999999999999997655 99999999999 88999999


Q ss_pred             hhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC---hHH------HHHHHhcCCCCCCCCHHHHHHHHH
Q 024338          175 NYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG---EDL------EKKILEKIPLGRYGQPEEVAGLVE  245 (269)
Q Consensus       175 ~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~---~~~------~~~~~~~~~~~~~~~~~~~a~~~~  245 (269)
                      .|++||++++.|+++++.|+++.||+|++|+||+++|++.....   +..      .+......|.+++.+|+|+|++++
T Consensus       161 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~  240 (278)
T 1spx_A          161 YYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIA  240 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcCCCcCCCCHHHHHHHHH
Confidence            99999999999999999999999999999999999999864321   111      233445578888999999999999


Q ss_pred             HhccCCCCCC-ccccEEEecCCcc
Q 024338          246 FLALNPAAGY-ITGQVLTIDGGMV  268 (269)
Q Consensus       246 ~l~~~~~~~~-~~G~~i~~dgg~~  268 (269)
                      ||++ +++++ ++|++|.+|||+.
T Consensus       241 ~l~s-~~~~~~~tG~~~~vdgG~~  263 (278)
T 1spx_A          241 FLAD-RKTSSYIIGHQLVVDGGSS  263 (278)
T ss_dssp             HHHC-HHHHTTCCSCEEEESTTGG
T ss_pred             HHcC-ccccCcccCcEEEECCCcc
Confidence            9994 44555 9999999999975

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=100.00  E-value=3.9e-46  Score=310.65  Aligned_cols=247  Identities=50%  Similarity=0.870  Sum_probs=200.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      |++++|++|||||++|||++++++|+++|++|+++.+|+++..+++.++++..+.++.++.+|++|.++++++++++.+.
T Consensus         1 M~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (247)
T 2hq1_A            1 MQLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDA   80 (247)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence            45789999999999999999999999999999886577777777788888777778999999999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKA  181 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  181 (269)
                      ++++|+||||||.....++.+.+.+++++.+++|+.+++.++++++|.|++++.++||++||..+..+.++...|++||+
T Consensus        81 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  160 (247)
T 2hq1_A           81 FGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKA  160 (247)
T ss_dssp             HSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC---------CHHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcHhHHHHH
Confidence            99999999999987766777888899999999999999999999999998878899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEE
Q 024338          182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL  261 (269)
Q Consensus       182 al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i  261 (269)
                      +++.|+++++.|+++.||++++++||+++|++.....+...+......|.+++.+|+|+|+++++|+ ++...+++|++|
T Consensus       161 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~-~~~~~~~~G~~~  239 (247)
T 2hq1_A          161 GLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVLPDKVKEMYLNNIPLKRFGTPEEVANVVGFLA-SDDSNYITGQVI  239 (247)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHH-SGGGTTCCSCEE
T ss_pred             HHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhcchHHHHHHHhhCCCCCCCCHHHHHHHHHHHc-CcccccccCcEE
Confidence            9999999999999999999999999999999876655555555556678888899999999999999 445678999999


Q ss_pred             EecCCccC
Q 024338          262 TIDGGMVM  269 (269)
Q Consensus       262 ~~dgg~~~  269 (269)
                      .+|||+.+
T Consensus       240 ~v~gG~~~  247 (247)
T 2hq1_A          240 NIDGGLVM  247 (247)
T ss_dssp             EESTTC--
T ss_pred             EeCCCccC
Confidence            99999864

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.5e-46  Score=316.01  Aligned_cols=240  Identities=29%  Similarity=0.498  Sum_probs=209.2

Q ss_pred             hhhcccccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHH
Q 024338           14 EQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVES   93 (269)
Q Consensus        14 ~~~~~~~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~   93 (269)
                      +.+....++++++|++|||||++|||+++|+.|+++|++|+++ +|+.+...         ..++.++.+|++|++++++
T Consensus        16 ~~~~~~~m~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~-~r~~~~~~---------~~~~~~~~~Dv~d~~~v~~   85 (260)
T 3un1_A           16 ENLYFQSMMRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVAT-SRSIKPSA---------DPDIHTVAGDISKPETADR   85 (260)
T ss_dssp             ----CHHHHHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEE-ESSCCCCS---------STTEEEEESCTTSHHHHHH
T ss_pred             hhhhhhhhhCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEE-eCChhhcc---------cCceEEEEccCCCHHHHHH
Confidence            3334445677899999999999999999999999999999985 56543221         2368899999999999999


Q ss_pred             HHHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcccc--CCC
Q 024338           94 MIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLV--GNI  171 (269)
Q Consensus        94 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~--~~~  171 (269)
                      +++++.++++++|+||||||+....++.+.+.++|++.+++|+.+++.++++++|.|.+++.++||++||..+..  +.+
T Consensus        86 ~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~  165 (260)
T 3un1_A           86 IVREGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGM  165 (260)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTTC
T ss_pred             HHHHHHHHCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCCC
Confidence            999999999999999999999888888999999999999999999999999999999988899999999988764  445


Q ss_pred             CChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCC
Q 024338          172 GQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNP  251 (269)
Q Consensus       172 ~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~  251 (269)
                      +...|++||++++.|+++++.|+++.||+||+|+||+++|++...   ..........|.+++.+|+|+|++++||.   
T Consensus       166 ~~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~---~~~~~~~~~~p~~r~~~~~dva~av~~L~---  239 (260)
T 3un1_A          166 PSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPA---ETHSTLAGLHPVGRMGEIRDVVDAVLYLE---  239 (260)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCG---GGHHHHHTTSTTSSCBCHHHHHHHHHHHH---
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCH---HHHHHHhccCCCCCCcCHHHHHHHHHHhc---
Confidence            668999999999999999999999999999999999999998653   33445566789999999999999999993   


Q ss_pred             CCCCccccEEEecCCccC
Q 024338          252 AAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       252 ~~~~~~G~~i~~dgg~~~  269 (269)
                      ++.+++||+|.+|||+.+
T Consensus       240 ~~~~itG~~i~vdGG~~~  257 (260)
T 3un1_A          240 HAGFITGEILHVDGGQNA  257 (260)
T ss_dssp             HCTTCCSCEEEESTTGGG
T ss_pred             ccCCCCCcEEEECCCeec
Confidence            456899999999999863

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=100.00  E-value=1.9e-46  Score=313.11  Aligned_cols=236  Identities=42%  Similarity=0.668  Sum_probs=201.8

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      .+++++|++|||||++|||++++++|+++|++|+++ .|+++..++           +..+.+|++|.++++++++++.+
T Consensus        10 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~-~r~~~~~~~-----------~~~~~~D~~~~~~~~~~~~~~~~   77 (247)
T 1uzm_A           10 KPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVT-HRGSGAPKG-----------LFGVEVDVTDSDAVDRAFTAVEE   77 (247)
T ss_dssp             CCCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEE-ESSSCCCTT-----------SEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEE-eCChHHHHH-----------hcCeeccCCCHHHHHHHHHHHHH
Confidence            456889999999999999999999999999999885 666543221           11388999999999999999999


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhH
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                      .++++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.++...|++||
T Consensus        78 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  157 (247)
T 1uzm_A           78 HQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASK  157 (247)
T ss_dssp             HHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHH
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCCCChhHHHHH
Confidence            99999999999998877778899999999999999999999999999999888889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccE
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQV  260 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~  260 (269)
                      ++++.|+++++.|+++.||+||+|+||+++|++.....+...+......|.+++.+|+|+|+.++||+ ++++.+++|++
T Consensus       158 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~-s~~~~~~~G~~  236 (247)
T 1uzm_A          158 AGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLA-SEDASYISGAV  236 (247)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHHHHHHHGGGCTTCSCBCHHHHHHHHHHHH-SGGGTTCCSCE
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHc-CccccCCcCCE
Confidence            99999999999999999999999999999999876554444455556678888999999999999999 45677999999


Q ss_pred             EEecCCccC
Q 024338          261 LTIDGGMVM  269 (269)
Q Consensus       261 i~~dgg~~~  269 (269)
                      |.+|||+.+
T Consensus       237 i~vdgG~~~  245 (247)
T 1uzm_A          237 IPVDGGMGM  245 (247)
T ss_dssp             EEESTTTTC
T ss_pred             EEECCCccc
Confidence            999999864

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=100.00  E-value=2.7e-45  Score=308.09  Aligned_cols=245  Identities=38%  Similarity=0.635  Sum_probs=220.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecC-CHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYAR-SSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r-~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      .++++|++|||||++|||++++++|+++|++|+++ .| +.+..+++.+++...+.++.++.+|++|.++++++++++.+
T Consensus         3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~-~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (261)
T 1gee_A            3 KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVN-YRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIK   81 (261)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEE-ESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEE-cCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999885 66 78778888888877777889999999999999999999999


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCeEEEEcCCccccCCCCChhhHHh
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK-KGRIINIASVVGLVGNIGQANYSAA  179 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~~~Y~~s  179 (269)
                      .++++|+||||||.....++.+.+.+++++.+++|+.+++.++++++|.|.+++ .++||++||..+..+.++...|++|
T Consensus        82 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  161 (261)
T 1gee_A           82 EFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAAS  161 (261)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCCCccHHHHH
Confidence            999999999999988777788899999999999999999999999999998776 7899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc--ChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCcc
Q 024338          180 KAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL--GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYIT  257 (269)
Q Consensus       180 K~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~  257 (269)
                      |++++.|+++++.|+++.||++++|+||+++|++....  .+...+......|.+++.+|+|+|+++++|+ ++.+.+++
T Consensus       162 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~-~~~~~~~~  240 (261)
T 1gee_A          162 KGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLA-SSEASYVT  240 (261)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHH-SGGGTTCC
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccChhHHHHHHhcCCCCCCcCHHHHHHHHHHHh-CccccCCC
Confidence            99999999999999999999999999999999986543  2333344455668888899999999999999 45667899


Q ss_pred             ccEEEecCCcc
Q 024338          258 GQVLTIDGGMV  268 (269)
Q Consensus       258 G~~i~~dgg~~  268 (269)
                      |++|.+|||+.
T Consensus       241 G~~~~v~gg~~  251 (261)
T 1gee_A          241 GITLFADGGMT  251 (261)
T ss_dssp             SCEEEESTTGG
T ss_pred             CcEEEEcCCcc
Confidence            99999999975

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.1e-45  Score=311.28  Aligned_cols=240  Identities=31%  Similarity=0.456  Sum_probs=202.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      +.+|++|||||++|||+++|++|+++|++|++ .+|+.+.++++.++++..+.++.++.+|++|.++++++++++.+.++
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   80 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILL-GARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWG   80 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEE-EESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999999888 58999999999999988888999999999999999999999999999


Q ss_pred             CccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHH
Q 024338          104 TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGV  183 (269)
Q Consensus       104 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al  183 (269)
                      ++|+||||||+....++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|++||+++
T Consensus        81 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal  160 (264)
T 3tfo_A           81 RIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAV  160 (264)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCCCChhHHHHHHHH
Confidence            99999999999888889999999999999999999999999999999888889999999999999999999999999999


Q ss_pred             HHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEEEe
Q 024338          184 IGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTI  263 (269)
Q Consensus       184 ~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~  263 (269)
                      ++|+++++.|+ + ||+||+|+||+++|++.............. ...+...+|+|+|++++||++. ...+.+|+++..
T Consensus       161 ~~l~~~la~e~-~-gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~-~~~~~~~~pedvA~~v~~l~s~-~~~~~~~~i~i~  236 (264)
T 3tfo_A          161 RAISDGLRQES-T-NIRVTCVNPGVVESELAGTITHEETMAAMD-TYRAIALQPADIARAVRQVIEA-PQSVDTTEITIR  236 (264)
T ss_dssp             HHHHHHHHHHC-S-SEEEEEEEECCC------------------------CCCHHHHHHHHHHHHHS-CTTEEEEEEEEE
T ss_pred             HHHHHHHHHhC-C-CCEEEEEecCCCcCcccccccchhHHHHHH-hhhccCCCHHHHHHHHHHHhcC-CccCccceEEEe
Confidence            99999999998 5 999999999999999876543321111111 1112245899999999999955 566899999999


Q ss_pred             cCCcc
Q 024338          264 DGGMV  268 (269)
Q Consensus       264 dgg~~  268 (269)
                      ++|+.
T Consensus       237 p~~~~  241 (264)
T 3tfo_A          237 PTASG  241 (264)
T ss_dssp             ECC--
T ss_pred             cCccc
Confidence            98864

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=100.00  E-value=1.2e-45  Score=310.50  Aligned_cols=237  Identities=36%  Similarity=0.560  Sum_probs=211.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      .++++|++|||||++|||++++++|+++|++|++ .+|+.+..+++.+++.   .++.++.+|++|.++++++++++.++
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~-~~r~~~~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~~   78 (260)
T 1nff_A            3 GRLTGKVALVSGGARGMGASHVRAMVAEGAKVVF-GDILDEEGKAMAAELA---DAARYVHLDVTQPAQWKAAVDTAVTA   78 (260)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHTG---GGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHhh---cCceEEEecCCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999888 4788877777666653   35788999999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKA  181 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  181 (269)
                      ++++|+||||||.....++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.++...|++||+
T Consensus        79 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  158 (260)
T 1nff_A           79 FGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKF  158 (260)
T ss_dssp             HSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCCCchhHHHHHH
Confidence            99999999999988777888899999999999999999999999999998877899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEE
Q 024338          182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL  261 (269)
Q Consensus       182 al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i  261 (269)
                      +++.|+++++.|+++.||+|++|+||+++|++.. ..+.   .. ...|.+++.+|+|+|+++++|+ ++.+.+++|++|
T Consensus       159 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-~~~~---~~-~~~~~~~~~~~~dvA~~v~~l~-s~~~~~~~G~~~  232 (260)
T 1nff_A          159 AVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD-WVPE---DI-FQTALGRAAEPVEVSNLVVYLA-SDESSYSTGAEF  232 (260)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT-TSCT---TC-SCCSSSSCBCHHHHHHHHHHHH-SGGGTTCCSCEE
T ss_pred             HHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc-cchh---hH-HhCccCCCCCHHHHHHHHHHHh-CccccCCcCCEE
Confidence            9999999999999999999999999999999864 2111   11 1457778889999999999999 456778999999


Q ss_pred             EecCCcc
Q 024338          262 TIDGGMV  268 (269)
Q Consensus       262 ~~dgg~~  268 (269)
                      .+|||+.
T Consensus       233 ~v~gG~~  239 (260)
T 1nff_A          233 VVDGGTV  239 (260)
T ss_dssp             EESTTGG
T ss_pred             EECCCee
Confidence            9999975

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=100.00  E-value=1.7e-45  Score=312.82  Aligned_cols=241  Identities=31%  Similarity=0.525  Sum_probs=217.8

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      ++++++|++|||||++|||+++|++|+++|++|++ .+|+.+.++++.+++   +.++.++.+|++|.++++++++++ +
T Consensus        25 ~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~-~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~-~   99 (281)
T 3ppi_A           25 IKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVI-ADLAAEKGKALADEL---GNRAEFVSTNVTSEDSVLAAIEAA-N   99 (281)
T ss_dssp             CGGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHH-T
T ss_pred             hhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEE-EeCChHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHH-H
Confidence            46789999999999999999999999999999888 588988888877776   568999999999999999999999 8


Q ss_pred             hcCCccEEEEc-cCCCCCCcc-----cCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh------CCCCeEEEEcCCcccc
Q 024338          101 AWGTVDILINN-AGITRDTLL-----MRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMK------KKKGRIINIASVVGLV  168 (269)
Q Consensus       101 ~~~~id~li~~-ag~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~------~~~~~iv~isS~~~~~  168 (269)
                      +++++|++||| +|......+     .+.+.++|++.+++|+.+++.+++.++|.|.+      ++.|+||++||..+..
T Consensus       100 ~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  179 (281)
T 3ppi_A          100 QLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYE  179 (281)
T ss_dssp             TSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTS
T ss_pred             HhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccC
Confidence            88999999999 555444333     46889999999999999999999999999976      5678999999999999


Q ss_pred             CCCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCC-CCCCCHHHHHHHHHHh
Q 024338          169 GNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPL-GRYGQPEEVAGLVEFL  247 (269)
Q Consensus       169 ~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~~~l  247 (269)
                      +.++...|++||+|++.|+++++.|+++.||+|++|+||+++|++.....++.........+. +++.+|+|+|++++||
T Consensus       180 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~~l  259 (281)
T 3ppi_A          180 GQIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVGEEALAKFAANIPFPKRLGTPDEFADAAAFL  259 (281)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTTCHHHHHHHHHTCCSSSSCBCHHHHHHHHHHH
T ss_pred             CCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcccHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999888777777777778887 8899999999999999


Q ss_pred             ccCCCCCCccccEEEecCCccC
Q 024338          248 ALNPAAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       248 ~~~~~~~~~~G~~i~~dgg~~~  269 (269)
                      +++   .+++|++|.+|||+.+
T Consensus       260 ~s~---~~~tG~~i~vdGG~~~  278 (281)
T 3ppi_A          260 LTN---GYINGEVMRLDGAQRF  278 (281)
T ss_dssp             HHC---SSCCSCEEEESTTCCC
T ss_pred             HcC---CCcCCcEEEECCCccc
Confidence            964   5899999999999864

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=100.00  E-value=1.4e-46  Score=325.52  Aligned_cols=251  Identities=36%  Similarity=0.529  Sum_probs=213.4

Q ss_pred             hhhhhcccccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCC----------HHHHHHHHHHHHHcCCcEEEE
Q 024338           12 TIEQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARS----------SKEAEEVCKEIEASGGQALTF   81 (269)
Q Consensus        12 ~~~~~~~~~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~----------~~~~~~~~~~l~~~~~~~~~~   81 (269)
                      ..+.-...++.+++||++|||||++|||+++|+.|+++|++|+++ +|+          .+..+++.+++...+.++.++
T Consensus        13 ~~~~~~p~~m~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (322)
T 3qlj_A           13 EAQTQGPGSMGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVN-DIGVGLDGSPASGGSAAQSVVDEITAAGGEAVAD   91 (322)
T ss_dssp             ---------CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEE-CCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEE
T ss_pred             eeeccCCchhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE-eCcccccccccccHHHHHHHHHHHHhcCCcEEEE
Confidence            333333445567899999999999999999999999999999885 665          677888888888888899999


Q ss_pred             EccCCCHHHHHHHHHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC------C
Q 024338           82 GGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK------K  155 (269)
Q Consensus        82 ~~Dls~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~------~  155 (269)
                      .+|++|.++++++++++.++++++|+||||||+....++.+.+.++|++.+++|+.+++.++++++|.|.+.+      .
T Consensus        92 ~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~  171 (322)
T 3qlj_A           92 GSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVD  171 (322)
T ss_dssp             CCCTTSHHHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred             ECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCC
Confidence            9999999999999999999999999999999998888889999999999999999999999999999996432      3


Q ss_pred             CeEEEEcCCccccCCCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCC
Q 024338          156 GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYG  235 (269)
Q Consensus       156 ~~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~  235 (269)
                      |+||++||..+..+.++...|++||+|++.|+++++.|+++.||+||+|+|| +.|++...........   .....+..
T Consensus       172 g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~~~~---~~~~~~~~  247 (322)
T 3qlj_A          172 GRIINTSSGAGLQGSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEMMAT---QDQDFDAM  247 (322)
T ss_dssp             EEEEEECCHHHHHCBTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC-----------CCTT
T ss_pred             cEEEEEcCHHHccCCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhhhhc---cccccCCC
Confidence            7999999999999999999999999999999999999999999999999999 9999876544332221   11222345


Q ss_pred             CHHHHHHHHHHhccCCCCCCccccEEEecCCcc
Q 024338          236 QPEEVAGLVEFLALNPAAGYITGQVLTIDGGMV  268 (269)
Q Consensus       236 ~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg~~  268 (269)
                      +|+|+|++++||+ +++++++||++|.+|||++
T Consensus       248 ~pedva~~v~~L~-s~~~~~itG~~i~vdGG~~  279 (322)
T 3qlj_A          248 APENVSPLVVWLG-SAEARDVTGKVFEVEGGKI  279 (322)
T ss_dssp             CGGGTHHHHHHHT-SGGGGGCCSCEEEEETTEE
T ss_pred             CHHHHHHHHHHHh-CccccCCCCCEEEECCCcc
Confidence            8999999999999 5677899999999999975

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=100.00  E-value=3.5e-46  Score=315.07  Aligned_cols=246  Identities=17%  Similarity=0.260  Sum_probs=209.4

Q ss_pred             cccCCCCCCEEEEeCCC--CchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHH
Q 024338           19 EAAQNVEAPVAVVTGAS--RGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIK   96 (269)
Q Consensus        19 ~~~~~~~~k~vlItGas--~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~   96 (269)
                      .....+++|++|||||+  +|||+++|++|+++|++|+++ .|+....+ ..+++.+...++.++.+|++|.++++++++
T Consensus         7 ~~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~-~r~~~~~~-~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   84 (271)
T 3ek2_A            7 HHMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFT-YVGDRFKD-RITEFAAEFGSELVFPCDVADDAQIDALFA   84 (271)
T ss_dssp             --CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEE-ESSGGGHH-HHHHHHHHTTCCCEEECCTTCHHHHHHHHH
T ss_pred             CCccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEE-ecchhhHH-HHHHHHHHcCCcEEEECCCCCHHHHHHHHH
Confidence            34567899999999999  999999999999999999885 66644333 334444444568889999999999999999


Q ss_pred             HHHHhcCCccEEEEccCCCCC----CcccC-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCC
Q 024338           97 TAVDAWGTVDILINNAGITRD----TLLMR-MKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNI  171 (269)
Q Consensus        97 ~~~~~~~~id~li~~ag~~~~----~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~  171 (269)
                      ++.++++++|+||||||+...    .++.+ .+.+++++.+++|+.+++.++++++|.|+  +.++||++||..+..+.+
T Consensus        85 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~g~iv~isS~~~~~~~~  162 (271)
T 3ek2_A           85 SLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLS--DDASLLTLSYLGAERAIP  162 (271)
T ss_dssp             HHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEE--EEEEEEEEECGGGTSBCT
T ss_pred             HHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhc--cCceEEEEeccccccCCC
Confidence            999999999999999998764    45555 89999999999999999999999999885  368999999999999999


Q ss_pred             CChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC--hHHHHHHHhcCCCCCCCCHHHHHHHHHHhcc
Q 024338          172 GQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG--EDLEKKILEKIPLGRYGQPEEVAGLVEFLAL  249 (269)
Q Consensus       172 ~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~  249 (269)
                      +...|++||+|++.|+++++.|+++.||+|++|+||+++|++.....  +...+......|.+++.+|+|+|++++||+ 
T Consensus       163 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pedva~~i~~l~-  241 (271)
T 3ek2_A          163 NYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPLKRNVTIEQVGNAGAFLL-  241 (271)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHH-
T ss_pred             CccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccchHHHHHHHHhcCCcCCCCCHHHHHHHHHHHc-
Confidence            99999999999999999999999999999999999999999876653  344556677889999999999999999999 


Q ss_pred             CCCCCCccccEEEecCCccC
Q 024338          250 NPAAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       250 ~~~~~~~~G~~i~~dgg~~~  269 (269)
                      ++.+.++||++|.+|||+.+
T Consensus       242 s~~~~~~tG~~i~vdgG~~~  261 (271)
T 3ek2_A          242 SDLASGVTAEVMHVDSGFNA  261 (271)
T ss_dssp             SGGGTTCCSEEEEESTTGGG
T ss_pred             CcccCCeeeeEEEECCCeee
Confidence            55678999999999999863

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=100.00  E-value=5.7e-46  Score=310.66  Aligned_cols=236  Identities=31%  Similarity=0.429  Sum_probs=193.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      |++++|++|||||++|||++++++|+++|++|+++ .|+.+.        .+  ..+.++.+|++|.++++++++++.++
T Consensus         3 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~-~r~~~~--------~~--~~~~~~~~D~~d~~~~~~~~~~~~~~   71 (250)
T 2fwm_X            3 MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGF-DQAFTQ--------EQ--YPFATEVMDVADAAQVAQVCQRLLAE   71 (250)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEE-ESCCCS--------SC--CSSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE-eCchhh--------hc--CCceEEEcCCCCHHHHHHHHHHHHHH
Confidence            56889999999999999999999999999999885 565431        11  12677899999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKA  181 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  181 (269)
                      ++++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.++...|++||+
T Consensus        72 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  151 (250)
T 2fwm_X           72 TERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKA  151 (250)
T ss_dssp             CSCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCCchHHHHHH
Confidence            99999999999988777888899999999999999999999999999998888899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC--hHHHH-HHHh-------cCCCCCCCCHHHHHHHHHHhccCC
Q 024338          182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG--EDLEK-KILE-------KIPLGRYGQPEEVAGLVEFLALNP  251 (269)
Q Consensus       182 al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~--~~~~~-~~~~-------~~~~~~~~~~~~~a~~~~~l~~~~  251 (269)
                      +++.|+++++.|+++.||+|++|+||+++|++.....  +...+ ....       ..|.+++.+|+|+|++++||+ ++
T Consensus       152 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~-s~  230 (250)
T 2fwm_X          152 ALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFLA-SD  230 (250)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECCC------------------------------------CHHHHHHHHHHHH-SG
T ss_pred             HHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccChhHHHHHHhhhhhcccccCCCCCCcCHHHHHHHHHHHh-Cc
Confidence            9999999999999999999999999999999865421  11111 2222       457778889999999999999 45


Q ss_pred             CCCCccccEEEecCCccC
Q 024338          252 AAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       252 ~~~~~~G~~i~~dgg~~~  269 (269)
                      ++++++|++|.+|||+.+
T Consensus       231 ~~~~~tG~~i~vdGG~~~  248 (250)
T 2fwm_X          231 LASHITLQDIVVDGGSTL  248 (250)
T ss_dssp             GGTTCCSCEEEESTTTTT
T ss_pred             cccCCCCCEEEECCCccc
Confidence            677999999999999864

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=100.00  E-value=1.3e-46  Score=315.02  Aligned_cols=236  Identities=44%  Similarity=0.754  Sum_probs=199.3

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      ..++.+|++|||||++|||++++++|+++|++|+++ .|+.+.++           ++.++.+|++|.++++++++++.+
T Consensus        16 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~-~r~~~~~~-----------~~~~~~~Dl~d~~~v~~~~~~~~~   83 (253)
T 2nm0_A           16 PRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAIT-YRSGEPPE-----------GFLAVKCDITDTEQVEQAYKEIEE   83 (253)
T ss_dssp             ----CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ESSSCCCT-----------TSEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEE-eCChHhhc-----------cceEEEecCCCHHHHHHHHHHHHH
Confidence            356789999999999999999999999999999885 66654321           256789999999999999999999


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhH
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                      .++++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.++...|++||
T Consensus        84 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  163 (253)
T 2nm0_A           84 THGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYAASK  163 (253)
T ss_dssp             HTCSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCHHHHHHHHHHH
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCcHHHHHHH
Confidence            99999999999998877778888999999999999999999999999999887889999999999998888889999999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccE
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQV  260 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~  260 (269)
                      ++++.|+++++.|+++.||+||+|+||+++|++.....+...+......|.+++.+|+|+|+++++|+ ++++.+++|++
T Consensus       164 ~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~i~~l~-s~~~~~~tG~~  242 (253)
T 2nm0_A          164 AGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLTDEQRANIVSQVPLGRYARPEEIAATVRFLA-SDDASYITGAV  242 (253)
T ss_dssp             HHHHHHHHHHHHHHCSSSEEEEEEEECSBCC---------CHHHHHTTCTTCSCBCHHHHHHHHHHHH-SGGGTTCCSCE
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh-CccccCCcCcE
Confidence            99999999999999999999999999999999876443333334455678888999999999999999 45677999999


Q ss_pred             EEecCCccC
Q 024338          261 LTIDGGMVM  269 (269)
Q Consensus       261 i~~dgg~~~  269 (269)
                      |.+|||+.+
T Consensus       243 i~vdGG~~~  251 (253)
T 2nm0_A          243 IPVDGGLGM  251 (253)
T ss_dssp             EEESTTTTC
T ss_pred             EEECCcccc
Confidence            999999864

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=100.00  E-value=2.7e-45  Score=312.27  Aligned_cols=242  Identities=21%  Similarity=0.305  Sum_probs=209.5

Q ss_pred             CCCCCEEEEeCCC--CchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           23 NVEAPVAVVTGAS--RGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        23 ~~~~k~vlItGas--~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      ++++|++|||||+  +|||+++++.|+++|++|+++ .|+.+ .++..+++......+.++.+|++|.++++++++++.+
T Consensus        18 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~-~r~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   95 (285)
T 2p91_A           18 LLEGKRALITGVANERSIAYGIAKSFHREGAQLAFT-YATPK-LEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEE   95 (285)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEE-ESSGG-GHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEE-eCCHH-HHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHH
Confidence            4899999999999  999999999999999999885 66664 3344455544333467899999999999999999999


Q ss_pred             hcCCccEEEEccCCCCC----CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhh
Q 024338          101 AWGTVDILINNAGITRD----TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANY  176 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y  176 (269)
                      .++++|+||||||....    .++.+.+.+++++.+++|+.+++.++++++|.|.++ .++||++||..+..+.++...|
T Consensus        96 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y  174 (285)
T 2p91_A           96 NWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGR-NGAIVTLSYYGAEKVVPHYNVM  174 (285)
T ss_dssp             HTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTS-CCEEEEEECGGGTSBCTTTTHH
T ss_pred             HcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCEEEEEccchhccCCCCccHH
Confidence            99999999999998754    567788999999999999999999999999999643 6899999999999999999999


Q ss_pred             HHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC--hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCC
Q 024338          177 SAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG--EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAG  254 (269)
Q Consensus       177 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~  254 (269)
                      ++||++++.|+++++.|+++.||+||+|+||+++|++.....  +...+......|++++.+|+|+|++++||+ ++.+.
T Consensus       175 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~~~l~-s~~~~  253 (285)
T 2p91_A          175 GIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPFGKPITIEDVGDTAVFLC-SDWAR  253 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHT-SGGGT
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHc-CCccc
Confidence            999999999999999999999999999999999999865432  233344555678888999999999999999 55677


Q ss_pred             CccccEEEecCCcc
Q 024338          255 YITGQVLTIDGGMV  268 (269)
Q Consensus       255 ~~~G~~i~~dgg~~  268 (269)
                      +++|++|.+|||+.
T Consensus       254 ~~tG~~~~vdgg~~  267 (285)
T 2p91_A          254 AITGEVVHVDNGYH  267 (285)
T ss_dssp             TCCSCEEEESTTGG
T ss_pred             CCCCCEEEECCCcc
Confidence            99999999999975

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=100.00  E-value=1.2e-45  Score=310.72  Aligned_cols=243  Identities=21%  Similarity=0.360  Sum_probs=210.9

Q ss_pred             cCCCCCCEEEEeCCC--CchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGAS--RGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTA   98 (269)
Q Consensus        21 ~~~~~~k~vlItGas--~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~   98 (269)
                      .+++++|++|||||+  +|||++++++|+++|++|+++ .|+.+ .++..+++.+....+.++.+|++|.++++++++++
T Consensus         3 ~~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~-~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~   80 (261)
T 2wyu_A            3 TVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALS-YQAER-LRPEAEKLAEALGGALLFRADVTQDEELDALFAGV   80 (261)
T ss_dssp             EECCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEE-ESCGG-GHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEE-cCCHH-HHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHH
Confidence            356789999999999  999999999999999999885 66664 33344455443334778999999999999999999


Q ss_pred             HHhcCCccEEEEccCCCCC----CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCCh
Q 024338           99 VDAWGTVDILINNAGITRD----TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQA  174 (269)
Q Consensus        99 ~~~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~  174 (269)
                      .+.++++|+||||||....    .++.+.+.++|++.+++|+.+++.++++++|.|++  .|+||++||..+..+.++..
T Consensus        81 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~  158 (261)
T 2wyu_A           81 KEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE--GGGIVTLTYYASEKVVPKYN  158 (261)
T ss_dssp             HHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEEECGGGTSBCTTCH
T ss_pred             HHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhcc--CCEEEEEecccccCCCCCch
Confidence            9999999999999998753    56778999999999999999999999999998853  58999999999999999999


Q ss_pred             hhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC--hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCC
Q 024338          175 NYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG--EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPA  252 (269)
Q Consensus       175 ~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~  252 (269)
                      .|++||++++.|+++++.|+++.||+||+|+||+++|++.....  +...+......|++++.+|+|+|++++||+ ++.
T Consensus       159 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~v~~l~-s~~  237 (261)
T 2wyu_A          159 VMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLL-SPL  237 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHH-SGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHc-Chh
Confidence            99999999999999999999999999999999999999865532  233444556678888999999999999999 556


Q ss_pred             CCCccccEEEecCCcc
Q 024338          253 AGYITGQVLTIDGGMV  268 (269)
Q Consensus       253 ~~~~~G~~i~~dgg~~  268 (269)
                      +.+++|++|.+|||+.
T Consensus       238 ~~~~tG~~~~vdgG~~  253 (261)
T 2wyu_A          238 ASGITGEVVYVDAGYH  253 (261)
T ss_dssp             GTTCCSCEEEESTTGG
T ss_pred             hcCCCCCEEEECCCcc
Confidence            7799999999999975

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.7e-45  Score=311.24  Aligned_cols=241  Identities=30%  Similarity=0.489  Sum_probs=210.4

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      .+++++|++|||||++|||++++++|+++|++|++ .+|+++.++++.+++    .++.++.+|++|.++++++++++.+
T Consensus         4 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~-~~r~~~~~~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~~~~   78 (270)
T 1yde_A            4 GTRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVI-CDKDESGGRALEQEL----PGAVFILCDVTQEDDVKTLVSETIR   78 (270)
T ss_dssp             CCTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHC----TTEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHh----cCCeEEEcCCCCHHHHHHHHHHHHH
Confidence            34678999999999999999999999999999888 478887776665554    2478899999999999999999999


Q ss_pred             hcCCccEEEEccCCCCC-CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHh
Q 024338          101 AWGTVDILINNAGITRD-TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAA  179 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  179 (269)
                      +++++|+||||||.... .++.+.+.++|++.+++|+.+++.++++++|.|+++ .++||++||..+..+.++...|++|
T Consensus        79 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~as  157 (270)
T 1yde_A           79 RFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIGQAQAVPYVAT  157 (270)
T ss_dssp             HHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHHCCTTCHHHHHH
T ss_pred             HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-CCEEEEEcCccccCCCCCCcccHHH
Confidence            99999999999998653 678889999999999999999999999999999654 6899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc---ChHH---HHHHHhcCCCCCCCCHHHHHHHHHHhccCCCC
Q 024338          180 KAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL---GEDL---EKKILEKIPLGRYGQPEEVAGLVEFLALNPAA  253 (269)
Q Consensus       180 K~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~---~~~~---~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~  253 (269)
                      |++++.|+++++.|+++.||+||+|+||+++|++....   .++.   ........|++++.+|+|+|++++||++ + +
T Consensus       158 Kaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s-~-~  235 (270)
T 1yde_A          158 KGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLAS-E-A  235 (270)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHH-H-C
T ss_pred             HHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcc-c-C
Confidence            99999999999999999999999999999999975432   1111   1222345788899999999999999995 3 5


Q ss_pred             CCccccEEEecCCccC
Q 024338          254 GYITGQVLTIDGGMVM  269 (269)
Q Consensus       254 ~~~~G~~i~~dgg~~~  269 (269)
                      +++|||+|.+|||+.+
T Consensus       236 ~~itG~~i~vdGG~~~  251 (270)
T 1yde_A          236 NFCTGIELLVTGGAEL  251 (270)
T ss_dssp             TTCCSCEEEESTTTTS
T ss_pred             CCcCCCEEEECCCeec
Confidence            7999999999999853

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=100.00  E-value=8.8e-45  Score=302.96  Aligned_cols=238  Identities=28%  Similarity=0.445  Sum_probs=207.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      ++++|++|||||++|||++++++|+++|++|++ ..|+.+.++++.+++...+.++.++.+|++|.++++++++++.+.+
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~   82 (247)
T 2jah_A            4 ALQGKVALITGASSGIGEATARALAAEGAAVAI-AARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEAL   82 (247)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            578999999999999999999999999999888 5888888888888887767789999999999999999999999999


Q ss_pred             CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHH
Q 024338          103 GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAG  182 (269)
Q Consensus       103 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  182 (269)
                      +++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|.+++ |+||++||..+..+.++...|++||++
T Consensus        83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a  161 (247)
T 2jah_A           83 GGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNVRNAAVYQATKFG  161 (247)
T ss_dssp             SCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCCTTCHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCCCCCcHHHHHHHH
Confidence            9999999999988777888999999999999999999999999999998766 999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCC--CCHHHHHHHHHHhccCCCCCCccccE
Q 024338          183 VIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRY--GQPEEVAGLVEFLALNPAAGYITGQV  260 (269)
Q Consensus       183 l~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~a~~~~~l~~~~~~~~~~G~~  260 (269)
                      ++.|+++++.|+++.||+||+|+||+++|++................| +++  .+|+|+|++++||+++ ...+.+++.
T Consensus       162 ~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~-~~~~~~~pedvA~~v~~l~s~-~~~~~~~~i  239 (247)
T 2jah_A          162 VNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHTATKEMYEQRI-SQIRKLQAQDIAEAVRYAVTA-PHHATVHEI  239 (247)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCCHHHHHHHHHHT-TTSCCBCHHHHHHHHHHHHHS-CTTEEEEEE
T ss_pred             HHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccchhhHHHHHhcc-cccCCCCHHHHHHHHHHHhCC-CccCccceE
Confidence            999999999999999999999999999999876543222222222223 444  7999999999999954 556777664


Q ss_pred             EEecC
Q 024338          261 LTIDG  265 (269)
Q Consensus       261 i~~dg  265 (269)
                       .++.
T Consensus       240 -~i~~  243 (247)
T 2jah_A          240 -FIRP  243 (247)
T ss_dssp             -EEEE
T ss_pred             -EecC
Confidence             4443

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=100.00  E-value=2e-44  Score=302.52  Aligned_cols=246  Identities=34%  Similarity=0.578  Sum_probs=220.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      +++++|++|||||++|||++++++|+++|++|++ .+|+.+..+++.++++..+.++.++.+|++|.++++++++++.+.
T Consensus         9 ~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (260)
T 3awd_A            9 LRLDNRVAIVTGGAQNIGLACVTALAEAGARVII-ADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQ   87 (260)
T ss_dssp             GCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            5688999999999999999999999999999888 478888888888888777778999999999999999999999999


Q ss_pred             cCCccEEEEccCCCC-CCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCC--hhhHH
Q 024338          102 WGTVDILINNAGITR-DTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQ--ANYSA  178 (269)
Q Consensus       102 ~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~--~~Y~~  178 (269)
                      ++++|+||||||... ..++.+.+.+++++.+++|+.+++.++++++|.|.+++.++||++||..+..+.++.  ..|++
T Consensus        88 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~Y~~  167 (260)
T 3awd_A           88 EGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNA  167 (260)
T ss_dssp             HSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCCHHHHH
T ss_pred             cCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCCCCCccccHH
Confidence            999999999999876 567788899999999999999999999999999987778999999999998887777  89999


Q ss_pred             hHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccc-cc-ChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCc
Q 024338          179 AKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTA-KL-GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYI  256 (269)
Q Consensus       179 sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~  256 (269)
                      ||++++.|+++++.|+++.||++++|+||+++|++.. .. .+...+......|.+++.+|+|+|+++++|++ +...++
T Consensus       168 sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~-~~~~~~  246 (260)
T 3awd_A          168 SKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPMGRVGQPDEVASVVQFLAS-DAASLM  246 (260)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTCHHHHHHHHHTCTTSSCBCHHHHHHHHHHHHS-GGGTTC
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCChHHHHHHHhcCCcCCCCCHHHHHHHHHHHhC-chhccC
Confidence            9999999999999999999999999999999999875 22 23444555566788889999999999999994 456789


Q ss_pred             cccEEEecCCccC
Q 024338          257 TGQVLTIDGGMVM  269 (269)
Q Consensus       257 ~G~~i~~dgg~~~  269 (269)
                      +|++|.+|||+.+
T Consensus       247 ~G~~~~v~gg~~~  259 (260)
T 3awd_A          247 TGAIVNVDAGFTV  259 (260)
T ss_dssp             CSCEEEESTTTTT
T ss_pred             CCcEEEECCceec
Confidence            9999999999863

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=100.00  E-value=1.1e-45  Score=312.16  Aligned_cols=241  Identities=18%  Similarity=0.223  Sum_probs=206.6

Q ss_pred             cCCCCCCEEEEeCC--CCchHHHHHHHHHHcCCcEEEEecCCHHH-HHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGA--SRGIGRAVATSLGKAGCKVLVNYARSSKE-AEEVCKEIEASGGQALTFGGDVSKEADVESMIKT   97 (269)
Q Consensus        21 ~~~~~~k~vlItGa--s~giG~~~a~~l~~~G~~v~i~~~r~~~~-~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~   97 (269)
                      +.++++|++|||||  ++|||++++++|+++|++|+++ +|+.+. ++++.+++   +.++.++.+|++|.+++++++++
T Consensus         2 m~~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~-~r~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~   77 (269)
T 2h7i_A            2 TGLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLT-GFDRLRLIQRITDRL---PAKAPLLELDVQNEEHLASLAGR   77 (269)
T ss_dssp             CCTTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEE-ECSCHHHHHHHHTTS---SSCCCEEECCTTCHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEE-ecChHHHHHHHHHhc---CCCceEEEccCCCHHHHHHHHHH
Confidence            34688999999999  9999999999999999999885 666544 34444333   45677899999999999999999


Q ss_pred             HHHhcC---CccEEEEccCCCC-----CCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccC
Q 024338           98 AVDAWG---TVDILINNAGITR-----DTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVG  169 (269)
Q Consensus        98 ~~~~~~---~id~li~~ag~~~-----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~  169 (269)
                      +.+.++   ++|+||||||...     ..++.+.+.++|++.+++|+.+++.++++++|.|.+  .|+||++||..+ .+
T Consensus        78 ~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~iss~~~-~~  154 (269)
T 2h7i_A           78 VTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP--GGSIVGMDFDPS-RA  154 (269)
T ss_dssp             HHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECCCS-SC
T ss_pred             HHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc--CCeEEEEcCccc-cc
Confidence            999999   9999999999875     467788999999999999999999999999999854  489999999876 67


Q ss_pred             CCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc-----ChH-------HHHHHHhcCCCC-CCCC
Q 024338          170 NIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL-----GED-------LEKKILEKIPLG-RYGQ  236 (269)
Q Consensus       170 ~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-----~~~-------~~~~~~~~~~~~-~~~~  236 (269)
                      .+++..|++||++++.|+++++.|++++||+||+|+||+++|++....     .+.       ..+......|++ ++.+
T Consensus       155 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~rr~~~  234 (269)
T 2h7i_A          155 MPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKD  234 (269)
T ss_dssp             CTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTC
T ss_pred             cCchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhccCCcccCCCC
Confidence            788999999999999999999999999999999999999999975432     121       122344567888 6999


Q ss_pred             HHHHHHHHHHhccCCCCCCccccEEEecCCccC
Q 024338          237 PEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       237 ~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg~~~  269 (269)
                      |+|+|++++||+ ++.++++|||+|.+|||+.+
T Consensus       235 p~dvA~~v~~L~-s~~~~~itG~~i~vdGG~~~  266 (269)
T 2h7i_A          235 ATPVAKTVCALL-SDWLPATTGDIIYADGGAHT  266 (269)
T ss_dssp             CHHHHHHHHHHH-SSSCTTCCSEEEEESTTGGG
T ss_pred             HHHHHHHHHHHh-CchhccCcceEEEecCCeee
Confidence            999999999999 56788999999999999863

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=100.00  E-value=1.4e-45  Score=310.76  Aligned_cols=241  Identities=17%  Similarity=0.265  Sum_probs=208.1

Q ss_pred             CCCCCEEEEeCCC--CchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           23 NVEAPVAVVTGAS--RGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        23 ~~~~k~vlItGas--~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      ++++|++|||||+  +|||++++++|+++|++|+++ +|+. ..++..+++........++.+|++|.++++++++++.+
T Consensus         6 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~-~r~~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   83 (265)
T 1qsg_A            6 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFT-YQND-KLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGK   83 (265)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEE-ESST-TTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHT
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEE-cCcH-HHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHH
Confidence            4889999999999  999999999999999999885 6665 33344445544323347889999999999999999999


Q ss_pred             hcCCccEEEEccCCCCC----CcccC-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChh
Q 024338          101 AWGTVDILINNAGITRD----TLLMR-MKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQAN  175 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~----~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~  175 (269)
                      +++++|+||||||....    .++.+ .+.++|++.+++|+.+++.++++++|.|.+  .|+||++||..+..+.++...
T Consensus        84 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~  161 (265)
T 1qsg_A           84 VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP--GSALLTLSYLGAERAIPNYNV  161 (265)
T ss_dssp             TCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTTTH
T ss_pred             HcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEEcchhhccCCCCchH
Confidence            99999999999998653    56667 899999999999999999999999999853  589999999999999999999


Q ss_pred             hHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC--hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCC
Q 024338          176 YSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG--EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAA  253 (269)
Q Consensus       176 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~  253 (269)
                      |++||++++.|+++++.|+++.||+|++|+||+++|++.....  +...+......|++++.+|+|+|++++||+ ++.+
T Consensus       162 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~v~~l~-s~~~  240 (265)
T 1qsg_A          162 MGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLC-SDLS  240 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHT-SGGG
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh-Cchh
Confidence            9999999999999999999999999999999999999876542  233344555678888999999999999999 4567


Q ss_pred             CCccccEEEecCCcc
Q 024338          254 GYITGQVLTIDGGMV  268 (269)
Q Consensus       254 ~~~~G~~i~~dgg~~  268 (269)
                      .+++|++|.+|||+.
T Consensus       241 ~~~tG~~~~vdgG~~  255 (265)
T 1qsg_A          241 AGISGEVVHVDGGFS  255 (265)
T ss_dssp             TTCCSCEEEESTTGG
T ss_pred             cCccCCEEEECCCcC
Confidence            799999999999975

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=100.00  E-value=3.2e-45  Score=308.53  Aligned_cols=233  Identities=32%  Similarity=0.522  Sum_probs=207.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      +++++|++|||||++|||+++++.|+++|++|+++ .|+.+.           +.++.++.+|++|.++++++++++.+.
T Consensus         4 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~-~r~~~~-----------~~~~~~~~~Dl~~~~~v~~~~~~~~~~   71 (264)
T 2dtx_A            4 SDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDL-SIHDPG-----------EAKYDHIECDVTNPDQVKASIDHIFKE   71 (264)
T ss_dssp             GGGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEE-ESSCCC-----------SCSSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEE-ecCccc-----------CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999885 555432           356788999999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKA  181 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  181 (269)
                      ++++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.++...|++||+
T Consensus        72 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  151 (264)
T 2dtx_A           72 YGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKH  151 (264)
T ss_dssp             HSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCCCchhHHHHHH
Confidence            99999999999988777888999999999999999999999999999998878899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc-------Ch----HHHHHHHhcCCCCCCCCHHHHHHHHHHhccC
Q 024338          182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL-------GE----DLEKKILEKIPLGRYGQPEEVAGLVEFLALN  250 (269)
Q Consensus       182 al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-------~~----~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~  250 (269)
                      +++.|+++++.|+++. |+||+|+||+++|++....       .+    ...+......|.+++.+|+|+|++++||+ +
T Consensus       152 a~~~~~~~la~e~~~~-i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~-s  229 (264)
T 2dtx_A          152 AVIGLTKSIALDYAPL-LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFLA-S  229 (264)
T ss_dssp             HHHHHHHHHHHHHTTT-SEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHH-S
T ss_pred             HHHHHHHHHHHHhcCC-cEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh-C
Confidence            9999999999999998 9999999999999986543       22    22334445678888999999999999999 5


Q ss_pred             CCCCCccccEEEecCCcc
Q 024338          251 PAAGYITGQVLTIDGGMV  268 (269)
Q Consensus       251 ~~~~~~~G~~i~~dgg~~  268 (269)
                      +++++++|++|.+|||+.
T Consensus       230 ~~~~~~tG~~i~vdGG~~  247 (264)
T 2dtx_A          230 REASFITGTCLYVDGGLS  247 (264)
T ss_dssp             GGGTTCCSCEEEESTTGG
T ss_pred             chhcCCCCcEEEECCCcc
Confidence            567799999999999975

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=100.00  E-value=2.3e-45  Score=311.17  Aligned_cols=241  Identities=17%  Similarity=0.231  Sum_probs=210.1

Q ss_pred             CCCCCEEEEeCCC--CchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           23 NVEAPVAVVTGAS--RGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        23 ~~~~k~vlItGas--~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      ++++|++|||||+  +|||+++++.|+++|++|+++ +|+.+ .++..+++.+...++.++.+|++|.++++++++++.+
T Consensus         3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~-~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   80 (275)
T 2pd4_A            3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFT-YLNES-LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKK   80 (275)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEE-ESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEE-eCCHH-HHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHH
Confidence            4789999999999  999999999999999999885 66654 4444455544333477899999999999999999999


Q ss_pred             hcCCccEEEEccCCCCC----CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhh
Q 024338          101 AWGTVDILINNAGITRD----TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANY  176 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y  176 (269)
                      .++++|+||||||....    .++.+.+.++|++.+++|+.+++.++++++|.|++  +|+||++||..+..+.++...|
T Consensus        81 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y  158 (275)
T 2pd4_A           81 DLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN--GASVLTLSYLGSTKYMAHYNVM  158 (275)
T ss_dssp             HTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTCHHH
T ss_pred             HcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEEecchhcCCCCCchhh
Confidence            99999999999998754    56778999999999999999999999999999853  5899999999999999999999


Q ss_pred             HHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC--hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCC
Q 024338          177 SAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG--EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAG  254 (269)
Q Consensus       177 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~  254 (269)
                      ++||++++.|+++++.|+++.||+||+|+||+++|++.....  +..........|++++.+|+|+|++++||+ ++.+.
T Consensus       159 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~~~l~-s~~~~  237 (275)
T 2pd4_A          159 GLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLL-SSLSS  237 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHH-SGGGT
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccccHHHHHHHHhcCCcCCCCCHHHHHHHHHHHh-Ccccc
Confidence            999999999999999999999999999999999999876543  233344555678888999999999999999 55677


Q ss_pred             CccccEEEecCCcc
Q 024338          255 YITGQVLTIDGGMV  268 (269)
Q Consensus       255 ~~~G~~i~~dgg~~  268 (269)
                      +++|++|.+|||+.
T Consensus       238 ~~tG~~~~vdgg~~  251 (275)
T 2pd4_A          238 GVSGEVHFVDAGYH  251 (275)
T ss_dssp             TCCSCEEEESTTGG
T ss_pred             CCCCCEEEECCCcc
Confidence            99999999999974

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-45  Score=308.30  Aligned_cols=237  Identities=29%  Similarity=0.494  Sum_probs=206.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      .++++|++|||||++|||++++++|+++|++|+++ +|+++.++++. ++    .++.++.+|++|.++++    ++.+.
T Consensus         2 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~-~r~~~~~~~~~-~~----~~~~~~~~D~~~~~~~~----~~~~~   71 (246)
T 2ag5_A            2 GRLDGKVIILTAAAQGIGQAAALAFAREGAKVIAT-DINESKLQELE-KY----PGIQTRVLDVTKKKQID----QFANE   71 (246)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEE-ESCHHHHGGGG-GS----TTEEEEECCTTCHHHHH----HHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE-ECCHHHHHHHH-hc----cCceEEEeeCCCHHHHH----HHHHH
Confidence            35789999999999999999999999999999884 78876665443 22    26888999999999888    44556


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCC-CChhhHHhH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNI-GQANYSAAK  180 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~-~~~~Y~~sK  180 (269)
                      ++++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.+ +...|++||
T Consensus        72 ~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~~sK  151 (246)
T 2ag5_A           72 VERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTK  151 (246)
T ss_dssp             CSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHH
T ss_pred             hCCCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCCCCCccHHHHH
Confidence            7899999999998877788889999999999999999999999999999887889999999999998888 899999999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC------hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCC
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG------EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAG  254 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~  254 (269)
                      ++++.|+++++.|+++.||+|++|+||+++|++.....      +...+......|.+++.+|+|+|++++||+ ++++.
T Consensus       152 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~-s~~~~  230 (246)
T 2ag5_A          152 AAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLA-SDESA  230 (246)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHH-SGGGT
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh-Ccccc
Confidence            99999999999999999999999999999999754311      223334455678888899999999999999 56677


Q ss_pred             CccccEEEecCCccC
Q 024338          255 YITGQVLTIDGGMVM  269 (269)
Q Consensus       255 ~~~G~~i~~dgg~~~  269 (269)
                      +++|++|.+|||+.+
T Consensus       231 ~~tG~~i~vdgG~~~  245 (246)
T 2ag5_A          231 YVTGNPVIIDGGWSL  245 (246)
T ss_dssp             TCCSCEEEECTTGGG
T ss_pred             CCCCCEEEECCCccC
Confidence            999999999999863

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=100.00  E-value=1e-44  Score=302.15  Aligned_cols=245  Identities=48%  Similarity=0.790  Sum_probs=220.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHH-cCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEA-SGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      +++++|++|||||++|||++++++|+++|++|++ ..|+.+..+++.+++.+ .+.++.++.+|++|.++++++++++.+
T Consensus         3 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (248)
T 2pnf_A            3 IKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVII-TGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYN   81 (248)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEE-EESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEE-EeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999888 47888888877777765 366889999999999999999999999


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhH
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                      .++++|+||||||.....++.+.+.+++++.+++|+.+++.+++.++|.|.+++.++||++||..+..+.++...|++||
T Consensus        82 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  161 (248)
T 2pnf_A           82 LVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTK  161 (248)
T ss_dssp             HSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred             hcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCCCCchHHHHH
Confidence            99999999999998877778889999999999999999999999999999887889999999999998999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccE
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQV  260 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~  260 (269)
                      ++++.++++++.|+++.||++++++||+++|++.....+...+......|.+++.+|+|+|++++++++ +...+++|++
T Consensus       162 ~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~-~~~~~~~G~~  240 (248)
T 2pnf_A          162 AGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLSEEIKQKYKEQIPLGRFGSPEEVANVVLFLCS-ELASYITGEV  240 (248)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHTCTTSSCBCHHHHHHHHHHHHS-GGGTTCCSCE
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhccHHHHHHHHhcCCCCCccCHHHHHHHHHHHhC-chhhcCCCcE
Confidence            999999999999999999999999999999998766555444555556788888899999999999994 4567899999


Q ss_pred             EEecCCcc
Q 024338          261 LTIDGGMV  268 (269)
Q Consensus       261 i~~dgg~~  268 (269)
                      +.+|||+.
T Consensus       241 ~~v~gg~~  248 (248)
T 2pnf_A          241 IHVNGGMF  248 (248)
T ss_dssp             EEESTTCC
T ss_pred             EEeCCCcC
Confidence            99999974

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=100.00  E-value=1.7e-44  Score=301.33  Aligned_cols=241  Identities=37%  Similarity=0.566  Sum_probs=215.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHH-HHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEI-EASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l-~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      +|++|||||++|||++++++|+++|++|++ ..|+.+.++++.+++ ...+.++.++.+|++|.++++++++++.+.+++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAA-LDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGA   80 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            689999999999999999999999999888 478888887777776 444567899999999999999999999999999


Q ss_pred             ccEEEEccCCCCCCc---ccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHH
Q 024338          105 VDILINNAGITRDTL---LMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKA  181 (269)
Q Consensus       105 id~li~~ag~~~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  181 (269)
                      +|+||||||.....+   +.+.+.+++++.+++|+.+++.+++.++|.|.+++.++||++||..+..+.++...|++||+
T Consensus        81 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  160 (250)
T 2cfc_A           81 IDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKG  160 (250)
T ss_dssp             CCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCchhHHHHHH
Confidence            999999999876555   78889999999999999999999999999998878899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCeEEEEEecCCccCCcccc-c-ChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCcccc
Q 024338          182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAK-L-GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQ  259 (269)
Q Consensus       182 al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~  259 (269)
                      +++.|+++++.|+++.||++++++||+++|++... . .+..........|.+++.+|+|+|+++++|++ +...+++|+
T Consensus       161 a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~-~~~~~~~G~  239 (250)
T 2cfc_A          161 AVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIPQKEIGTAAQVADAVMFLAG-EDATYVNGA  239 (250)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHS-TTCTTCCSC
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcC-chhhcccCC
Confidence            99999999999999999999999999999998654 2 23344455566788889999999999999994 566789999


Q ss_pred             EEEecCCcc
Q 024338          260 VLTIDGGMV  268 (269)
Q Consensus       260 ~i~~dgg~~  268 (269)
                      +|.+|||+.
T Consensus       240 ~~~v~gG~~  248 (250)
T 2cfc_A          240 ALVMDGAYT  248 (250)
T ss_dssp             EEEESTTGG
T ss_pred             EEEECCcee
Confidence            999999985

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=100.00  E-value=4.7e-45  Score=303.14  Aligned_cols=233  Identities=34%  Similarity=0.622  Sum_probs=206.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTV  105 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i  105 (269)
                      +|++|||||++|||++++++|+++|++|+++ .|+.+.   ..+++   +  +.++.+|++| ++++++++++.+.++++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~-~r~~~~---~~~~~---~--~~~~~~D~~~-~~~~~~~~~~~~~~g~i   71 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIA-SRNPEE---AAQSL---G--AVPLPTDLEK-DDPKGLVKRALEALGGL   71 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ESSCHH---HHHHH---T--CEEEECCTTT-SCHHHHHHHHHHHHTSC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE-eCCHHH---HHHhh---C--cEEEecCCch-HHHHHHHHHHHHHcCCC
Confidence            6899999999999999999999999999885 666554   23333   2  6778999999 99999999999999999


Q ss_pred             cEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCC--CCChhhHHhHHHH
Q 024338          106 DILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGN--IGQANYSAAKAGV  183 (269)
Q Consensus       106 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~--~~~~~Y~~sK~al  183 (269)
                      |+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.  ++...|++||+++
T Consensus        72 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sK~a~  151 (239)
T 2ekp_A           72 HVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTAL  151 (239)
T ss_dssp             CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTSCCHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCCCCCCccHHHHHHHH
Confidence            99999999887778889999999999999999999999999999988788999999999999887  8899999999999


Q ss_pred             HHHHHHHHHHhccCCeEEEEEecCCccCCccccc--ChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEE
Q 024338          184 IGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL--GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL  261 (269)
Q Consensus       184 ~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i  261 (269)
                      +.|+++++.|+++.||+|++|+||+++|++....  .++..+......|.+++.+|+|+|++++||+ ++++++++|++|
T Consensus       152 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~-s~~~~~~tG~~~  230 (239)
T 2ekp_A          152 LGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQNPELYEPITARIPMGRWARPEEIARVAAVLC-GDEAEYLTGQAV  230 (239)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHT-SGGGTTCCSCEE
T ss_pred             HHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHc-CchhcCCCCCEE
Confidence            9999999999999999999999999999986542  2333444556678888999999999999999 556779999999


Q ss_pred             EecCCccC
Q 024338          262 TIDGGMVM  269 (269)
Q Consensus       262 ~~dgg~~~  269 (269)
                      .+|||+.+
T Consensus       231 ~vdgG~~~  238 (239)
T 2ekp_A          231 AVDGGFLA  238 (239)
T ss_dssp             EESTTTTT
T ss_pred             EECCCccc
Confidence            99999864

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=100.00  E-value=4.1e-45  Score=307.94  Aligned_cols=247  Identities=32%  Similarity=0.514  Sum_probs=193.6

Q ss_pred             ccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHH
Q 024338           20 AAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAV   99 (269)
Q Consensus        20 ~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~   99 (269)
                      ..+++++|++|||||++|||++++++|+++|++|++ ..|+.+.++++.+++...+.++.++.+|++|.++++++++++.
T Consensus         8 ~~~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   86 (266)
T 1xq1_A            8 QRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHT-CARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVS   86 (266)
T ss_dssp             CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHH
Confidence            346788999999999999999999999999999888 5788888888888887777789999999999999999999999


Q ss_pred             Hhc-CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHH
Q 024338          100 DAW-GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSA  178 (269)
Q Consensus       100 ~~~-~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~  178 (269)
                      +.+ +++|+||||||.....++.+.+.+++++.+++|+.+++.++++++|.|++++.++||++||..+..+.++...|++
T Consensus        87 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  166 (266)
T 1xq1_A           87 SMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSA  166 (266)
T ss_dssp             HHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHH
T ss_pred             HHhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCCCCCchHHH
Confidence            999 8999999999987777788889999999999999999999999999998878899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC-hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCcc
Q 024338          179 AKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG-EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYIT  257 (269)
Q Consensus       179 sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~  257 (269)
                      ||++++.|+++++.|+++.||++++|+||+++|++..... +..........|++++.+|+|+|+++++|+ ++++.+++
T Consensus       167 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~-~~~~~~~~  245 (266)
T 1xq1_A          167 TKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAFLC-MPAASYIT  245 (266)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-------------------------CCGGGGHHHHHHHT-SGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHc-CccccCcc
Confidence            9999999999999999999999999999999999865432 222233334567778889999999999999 45667899


Q ss_pred             ccEEEecCCcc
Q 024338          258 GQVLTIDGGMV  268 (269)
Q Consensus       258 G~~i~~dgg~~  268 (269)
                      |++|.+|||+.
T Consensus       246 G~~~~v~gG~~  256 (266)
T 1xq1_A          246 GQTICVDGGLT  256 (266)
T ss_dssp             SCEEECCCCEE
T ss_pred             CcEEEEcCCcc
Confidence            99999999975

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=100.00  E-value=2.3e-44  Score=302.98  Aligned_cols=236  Identities=33%  Similarity=0.490  Sum_probs=205.3

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      +.++++|++|||||++|||+++|++|+++|++|++ .+|+.+.++++.+++...+.++.++.+|++|.++++++++++.+
T Consensus        24 m~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~  102 (262)
T 3rkr_A           24 MSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVL-TARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLA  102 (262)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHH
Confidence            45688999999999999999999999999999888 58999999999999988888999999999999999999999999


Q ss_pred             hcCCccEEEEccCC-CCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHh
Q 024338          101 AWGTVDILINNAGI-TRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAA  179 (269)
Q Consensus       101 ~~~~id~li~~ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  179 (269)
                      .++++|+||||||. ....++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|++|
T Consensus       103 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  182 (262)
T 3rkr_A          103 AHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTAS  182 (262)
T ss_dssp             HHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCTTCHHHHHH
T ss_pred             hcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCchHHHH
Confidence            99999999999998 45567888999999999999999999999999999998889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCcccc
Q 024338          180 KAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQ  259 (269)
Q Consensus       180 K~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~  259 (269)
                      |++++.|+++++.|+++.||+|++|+||+++|++......        ..+..+..+|+|+|++++||++ +...+++||
T Consensus       183 Kaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--------~~~~~~~~~p~dvA~~v~~l~s-~~~~~~~g~  253 (262)
T 3rkr_A          183 KWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLSA--------KKSALGAIEPDDIADVVALLAT-QADQSFISE  253 (262)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECCC------------------------CCCHHHHHHHHHHHHT-CCTTCCEEE
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCccccccc--------ccccccCCCHHHHHHHHHHHhc-CccccccCc
Confidence            9999999999999999999999999999999998654322        1234556799999999999995 456688999


Q ss_pred             EEEecCC
Q 024338          260 VLTIDGG  266 (269)
Q Consensus       260 ~i~~dgg  266 (269)
                      ++..+.+
T Consensus       254 ~~i~p~~  260 (262)
T 3rkr_A          254 VLVRPTL  260 (262)
T ss_dssp             EEEECCC
T ss_pred             EEecccc
Confidence            9988765

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=100.00  E-value=7.1e-45  Score=307.63  Aligned_cols=239  Identities=31%  Similarity=0.442  Sum_probs=191.0

Q ss_pred             ccccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHH
Q 024338           18 NEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKT   97 (269)
Q Consensus        18 ~~~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~   97 (269)
                      -..+.++.+|++|||||++|||+++|++|+++|++|++ .+|+.+.++++.+++   +.++.++.+|++|.+++++++++
T Consensus        20 ~~~m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~-~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~   95 (272)
T 4dyv_A           20 FQSMSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVAL-AGRRLDALQETAAEI---GDDALCVPTDVTDPDSVRALFTA   95 (272)
T ss_dssp             --------CCEEEETTTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHH---TSCCEEEECCTTSHHHHHHHHHH
T ss_pred             hhhhcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHH
Confidence            33455688999999999999999999999999999888 588888888777776   46788999999999999999999


Q ss_pred             HHHhcCCccEEEEccCCCCC-CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC--CCeEEEEcCCccccCCCCCh
Q 024338           98 AVDAWGTVDILINNAGITRD-TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK--KGRIINIASVVGLVGNIGQA  174 (269)
Q Consensus        98 ~~~~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~iv~isS~~~~~~~~~~~  174 (269)
                      +.++++++|+||||||+... .++.+.+.++|++.+++|+.+++.++++++|.|.+++  .|+||++||..+..+.++..
T Consensus        96 ~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~  175 (272)
T 4dyv_A           96 TVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSA  175 (272)
T ss_dssp             HHHHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCTTCH
T ss_pred             HHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCCCch
Confidence            99999999999999998654 6788999999999999999999999999999998765  68999999999999999999


Q ss_pred             hhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCC
Q 024338          175 NYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAG  254 (269)
Q Consensus       175 ~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~  254 (269)
                      .|++||+++++|+++++.|+++.||+||+|+||+++|++.+...+... ......+.+++.+|+|+|++++||++.+...
T Consensus       176 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~~~~~pedvA~~v~fL~s~~~~~  254 (272)
T 4dyv_A          176 PYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAGVP-QADLSIKVEPVMDVAHVASAVVYMASLPLDA  254 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC-------------------------CHHHHHHHHHHHHHSCTTS
T ss_pred             HHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhcccch-hhhhcccccCCCCHHHHHHHHHHHhCCCCcC
Confidence            999999999999999999999999999999999999998765543322 2223456677889999999999999877765


Q ss_pred             CccccEE
Q 024338          255 YITGQVL  261 (269)
Q Consensus       255 ~~~G~~i  261 (269)
                      ++++..+
T Consensus       255 ~~~~i~i  261 (272)
T 4dyv_A          255 NVQFMTI  261 (272)
T ss_dssp             CCCEEEE
T ss_pred             ccceEEE
Confidence            5544443

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=100.00  E-value=6e-45  Score=306.41  Aligned_cols=246  Identities=41%  Similarity=0.721  Sum_probs=209.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcC-------CcEEEEEccCCCHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASG-------GQALTFGGDVSKEADVESM   94 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~-------~~~~~~~~Dls~~~~~~~~   94 (269)
                      .++++|++|||||++|||+++++.|+++|++|++ .+|+.+..+++.+++.+.+       .++.++.+|++|.++++++
T Consensus         3 ~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   81 (264)
T 2pd6_A            3 NRLRSALALVTGAGSGIGRAVSVRLAGEGATVAA-CDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCL   81 (264)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE-EESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEE-EeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHH
Confidence            4678999999999999999999999999999888 4788887777776665443       5678899999999999999


Q ss_pred             HHHHHHhcCCc-cEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCeEEEEcCCccccCCCC
Q 024338           95 IKTAVDAWGTV-DILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK-KGRIINIASVVGLVGNIG  172 (269)
Q Consensus        95 ~~~~~~~~~~i-d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~  172 (269)
                      ++++.+.++++ |+||||||.....++.+.+.+++++.+++|+.+++.++++++|.|.+++ .++||++||..+..+.++
T Consensus        82 ~~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  161 (264)
T 2pd6_A           82 LEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVG  161 (264)
T ss_dssp             HHHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCCTT
T ss_pred             HHHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCCCC
Confidence            99999999998 9999999988777888899999999999999999999999999997766 789999999999999999


Q ss_pred             ChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCC
Q 024338          173 QANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPA  252 (269)
Q Consensus       173 ~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~  252 (269)
                      ...|++||++++.|+++++.|+++.||++++|+||+++|++.....+...+......|.+++.+|+|+|++++++++ ++
T Consensus       162 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~-~~  240 (264)
T 2pd6_A          162 QTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQKVVDKITEMIPMGHLGDPEDVADVVAFLAS-ED  240 (264)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC----------CTGGGCTTCSCBCHHHHHHHHHHHHS-GG
T ss_pred             ChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcCHHHHHHHHHhCCCCCCCCHHHHHHHHHHHcC-Cc
Confidence            99999999999999999999999999999999999999998765433333334455677888899999999999994 45


Q ss_pred             CCCccccEEEecCCccC
Q 024338          253 AGYITGQVLTIDGGMVM  269 (269)
Q Consensus       253 ~~~~~G~~i~~dgg~~~  269 (269)
                      ..+++|+++.+|||+.+
T Consensus       241 ~~~~~G~~~~v~gg~~~  257 (264)
T 2pd6_A          241 SGYITGTSVEVTGGLFM  257 (264)
T ss_dssp             GTTCCSCEEEESTTC--
T ss_pred             ccCCCCCEEEECCCcee
Confidence            67899999999999853

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=100.00  E-value=1e-44  Score=307.63  Aligned_cols=245  Identities=33%  Similarity=0.503  Sum_probs=216.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      +++++|++|||||++|||++++++|+++|++|+++ +|+.+..+++.+++...+.++.++.+|++|.++++++++++.+.
T Consensus        30 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  108 (279)
T 3ctm_A           30 FSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIW-YNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKD  108 (279)
T ss_dssp             GCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEE-ESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE-eCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999885 67666666666666666778999999999999999999999999


Q ss_pred             cCCccEEEEccCCCCC-Cccc-CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccC--CCCChhhH
Q 024338          102 WGTVDILINNAGITRD-TLLM-RMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVG--NIGQANYS  177 (269)
Q Consensus       102 ~~~id~li~~ag~~~~-~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~--~~~~~~Y~  177 (269)
                      ++++|+||||||.... .++. +.+.+++++.+++|+.+++.+++.++|.|.+++.++||++||..+..+  .++...|+
T Consensus       109 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~  188 (279)
T 3ctm_A          109 FGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAPYN  188 (279)
T ss_dssp             HSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC---CCHHHHH
T ss_pred             hCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCCCCCCcccHH
Confidence            9999999999998765 6666 788999999999999999999999999998878899999999999888  78889999


Q ss_pred             HhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCcc
Q 024338          178 AAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYIT  257 (269)
Q Consensus       178 ~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~  257 (269)
                      +||++++.|+++++.|+++.| ++++|+||+++|++.....+..........|.+++.+|+|+|+++++|+ +++..+++
T Consensus       189 ~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~-s~~~~~~t  266 (279)
T 3ctm_A          189 TAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFASKDMKAKWWQLTPLGREGLTQELVGGYLYLA-SNASTFTT  266 (279)
T ss_dssp             HHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSCCHHHHHHHHHHSTTCSCBCGGGTHHHHHHHH-SGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHHhcccC-CEEEEeccCCccccccccChHHHHHHHHhCCccCCcCHHHHHHHHHHHh-CccccCcc
Confidence            999999999999999999999 9999999999999876544444455556678888999999999999999 45667899


Q ss_pred             ccEEEecCCccC
Q 024338          258 GQVLTIDGGMVM  269 (269)
Q Consensus       258 G~~i~~dgg~~~  269 (269)
                      |++|.+|||+.+
T Consensus       267 G~~i~vdgG~~~  278 (279)
T 3ctm_A          267 GSDVVIDGGYTC  278 (279)
T ss_dssp             SCEEEESTTCCC
T ss_pred             CCEEEECCCeec
Confidence            999999999864

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=100.00  E-value=1.6e-44  Score=303.87  Aligned_cols=242  Identities=33%  Similarity=0.538  Sum_probs=207.2

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      .+++++|++|||||++|||++++++|+++|++|+++ .|+.+.++++.+++   +.++.++.+|++|.++++++++++.+
T Consensus         7 ~~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~-~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (265)
T 2o23_A            7 CRSVKGLVAVITGGASGLGLATAERLVGQGASAVLL-DLPNSGGEAQAKKL---GNNCVFAPADVTSEKDVQTALALAKG   82 (265)
T ss_dssp             -CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECTTSSHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEE-eCCcHhHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            367889999999999999999999999999999884 77776666666655   56789999999999999999999999


Q ss_pred             hcCCccEEEEccCCCCCCccc------CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC------CCCeEEEEcCCcccc
Q 024338          101 AWGTVDILINNAGITRDTLLM------RMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKK------KKGRIINIASVVGLV  168 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~~~~iv~isS~~~~~  168 (269)
                      +++++|+||||||.....++.      +.+.+++++.+++|+.+++.++++++|.|.++      +.++||++||..+..
T Consensus        83 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~  162 (265)
T 2o23_A           83 KFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFE  162 (265)
T ss_dssp             HHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH
T ss_pred             HCCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcC
Confidence            999999999999987654443      37899999999999999999999999999876      678999999999999


Q ss_pred             CCCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCC-CCCCCHHHHHHHHHHh
Q 024338          169 GNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPL-GRYGQPEEVAGLVEFL  247 (269)
Q Consensus       169 ~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~~~l  247 (269)
                      +.++...|++||++++.|+++++.|+++.||+|++|+||+++|++.....+...+......|. +++.+|+|+|+++++|
T Consensus       163 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  242 (265)
T 2o23_A          163 GQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFPSRLGDPAEYAHLVQAI  242 (265)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----------CHHHHTCSSSCSCBCHHHHHHHHHHH
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccCHHHHHHHHHcCCCcCCCCCHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999998765443333344556677 7888999999999999


Q ss_pred             ccCCCCCCccccEEEecCCccC
Q 024338          248 ALNPAAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       248 ~~~~~~~~~~G~~i~~dgg~~~  269 (269)
                      +++   .+++|++|.+|||+.+
T Consensus       243 ~~~---~~~~G~~i~vdgG~~~  261 (265)
T 2o23_A          243 IEN---PFLNGEVIRLDGAIRM  261 (265)
T ss_dssp             HHC---TTCCSCEEEESTTCCC
T ss_pred             hhc---CccCceEEEECCCEec
Confidence            943   5899999999999864

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=100.00  E-value=3.7e-45  Score=318.90  Aligned_cols=235  Identities=26%  Similarity=0.363  Sum_probs=209.6

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHH-------HHHHHHHHHHcCCcEEEEEccCCCHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKE-------AEEVCKEIEASGGQALTFGGDVSKEADVES   93 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~   93 (269)
                      +.+++||++|||||++|||+++|++|+++|++|+++ +|+.+.       +++..+++...+.++.++.+|++|.+++++
T Consensus        40 ~~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~-~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~  118 (346)
T 3kvo_A           40 TGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIA-AKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISA  118 (346)
T ss_dssp             CSTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEE-ESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHH
T ss_pred             CCCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEE-ECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHH
Confidence            467899999999999999999999999999999885 666543       556777787778899999999999999999


Q ss_pred             HHHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccC--CC
Q 024338           94 MIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVG--NI  171 (269)
Q Consensus        94 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~--~~  171 (269)
                      +++++.++++++|+||||||+....++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+  .+
T Consensus       119 ~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~~~  198 (346)
T 3kvo_A          119 AVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFK  198 (346)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGGTS
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCCCC
Confidence            9999999999999999999998888889999999999999999999999999999998888899999999999887  78


Q ss_pred             CChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCC-ccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccC
Q 024338          172 GQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGF-IASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALN  250 (269)
Q Consensus       172 ~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~  250 (269)
                      +...|++||++++.|+++++.|++ .||+||+|+||+ ++|++.+..        ....+.+++.+|+|+|++++||++ 
T Consensus       199 ~~~~Y~aSKaal~~l~~~la~e~~-~gIrvn~v~PG~~i~T~~~~~~--------~~~~~~~r~~~pedvA~~v~~L~s-  268 (346)
T 3kvo_A          199 QHCAYTIAKYGMSMYVLGMAEEFK-GEIAVNALWPKTAIHTAAMDML--------GGPGIESQCRKVDIIADAAYSIFQ-  268 (346)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHTT-TTCEEEEEECSBCBCCHHHHHH--------CC--CGGGCBCTHHHHHHHHHHHT-
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCccccHHHHhh--------ccccccccCCCHHHHHHHHHHHHh-
Confidence            899999999999999999999999 899999999995 888864422        223355677799999999999994 


Q ss_pred             CCCCCccccEEEecCCcc
Q 024338          251 PAAGYITGQVLTIDGGMV  268 (269)
Q Consensus       251 ~~~~~~~G~~i~~dgg~~  268 (269)
                      + ++++||++| +|||++
T Consensus       269 ~-~~~itG~~i-vdgg~~  284 (346)
T 3kvo_A          269 K-PKSFTGNFV-IDENIL  284 (346)
T ss_dssp             S-CTTCCSCEE-EHHHHH
T ss_pred             c-CCCCCceEE-ECCcEe
Confidence            4 779999999 999864

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=100.00  E-value=6.3e-44  Score=298.56  Aligned_cols=245  Identities=33%  Similarity=0.556  Sum_probs=220.7

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      .+++++|++|||||++|||++++++|+++|++|++ .+|+.+.++++.++++..+.++.++.+|++|.++++++++++.+
T Consensus         6 ~~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   84 (255)
T 1fmc_A            6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVV-SDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAIS   84 (255)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEE-EESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEE-EcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            45688999999999999999999999999999888 58888888888888877777899999999999999999999999


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhH
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                      +++++|+||||||.....++ +.+.+++++.+++|+.+++.++++++|.|.+++.++||++||..+..+.++...|++||
T Consensus        85 ~~~~~d~vi~~Ag~~~~~~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  163 (255)
T 1fmc_A           85 KLGKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSK  163 (255)
T ss_dssp             HHSSCCEEEECCCCCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHH
T ss_pred             hcCCCCEEEECCCCCCCCCC-CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCCcccHHHH
Confidence            99999999999998766555 78899999999999999999999999999887889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc-ChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCcccc
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL-GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQ  259 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~  259 (269)
                      ++++.|+++++.|+++.||++++++||++.|++.... .+..........|.+++.+|+|+|+++++|+ ++...+++|+
T Consensus       164 ~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~-~~~~~~~~G~  242 (255)
T 1fmc_A          164 AAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLC-SPAASWVSGQ  242 (255)
T ss_dssp             HHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSSCSCBCHHHHHHHHHHHH-SGGGTTCCSC
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhccChHHHHHHHhcCCcccCCCHHHHHHHHHHHh-CCccccCCCc
Confidence            9999999999999999999999999999999976543 3444555666778888999999999999999 4556789999


Q ss_pred             EEEecCCcc
Q 024338          260 VLTIDGGMV  268 (269)
Q Consensus       260 ~i~~dgg~~  268 (269)
                      +|.+|||..
T Consensus       243 ~~~v~gg~~  251 (255)
T 1fmc_A          243 ILTVSGGGV  251 (255)
T ss_dssp             EEEESTTSC
T ss_pred             EEEECCcee
Confidence            999999975

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=100.00  E-value=2.6e-44  Score=300.29  Aligned_cols=245  Identities=30%  Similarity=0.523  Sum_probs=215.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      .++++|++|||||++|||++++++|+++|++|++ .+|+.+..+++.+++... .++.++.+|++|.++++++++++.+.
T Consensus         2 ~~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~-~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (251)
T 1zk4_A            2 NRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMI-TGRHSDVGEKAAKSVGTP-DQIQFFQHDSSDEDGWTKLFDATEKA   79 (251)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHCCT-TTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHhhcc-CceEEEECCCCCHHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999888 478887777776666432 57889999999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC-CeEEEEcCCccccCCCCChhhHHhH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKK-GRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                      ++++|+||||||.....++.+.+.++|++.+++|+.+++.+++.++|.|++++. ++||++||..+..+.++...|++||
T Consensus        80 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  159 (251)
T 1zk4_A           80 FGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASK  159 (251)
T ss_dssp             HSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCCCCccchHHH
Confidence            999999999999887777888999999999999999999999999999987766 8999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhc--cCCeEEEEEecCCccCCcccccChHHH-HHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCcc
Q 024338          181 AGVIGLTKTVAKEYA--SRNINVNAIAPGFIASDMTAKLGEDLE-KKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYIT  257 (269)
Q Consensus       181 ~al~~~~~~la~e~~--~~gi~v~~v~pG~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~  257 (269)
                      ++++.|+++++.|+.  +.||++++|+||+++|++......... .......|.+++.+|+|+|+++++|++ +...+++
T Consensus       160 ~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~-~~~~~~~  238 (251)
T 1zk4_A          160 GAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLAS-NESKFAT  238 (251)
T ss_dssp             HHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHTSTTTCTTSSCBCHHHHHHHHHHHHS-GGGTTCC
T ss_pred             HHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcCchhhhHHHhhcCCCCCCcCHHHHHHHHHHHcC-ccccccc
Confidence            999999999999988  889999999999999998765432222 112334577888899999999999994 4567899


Q ss_pred             ccEEEecCCccC
Q 024338          258 GQVLTIDGGMVM  269 (269)
Q Consensus       258 G~~i~~dgg~~~  269 (269)
                      |+++.+|||+.+
T Consensus       239 G~~~~v~gG~~~  250 (251)
T 1zk4_A          239 GSEFVVDGGYTA  250 (251)
T ss_dssp             SCEEEESTTGGG
T ss_pred             CcEEEECCCccC
Confidence            999999999853

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=100.00  E-value=3.1e-44  Score=300.41  Aligned_cols=243  Identities=33%  Similarity=0.599  Sum_probs=215.9

Q ss_pred             ccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcE-EEEEccCCCHHHHHHHHHHH
Q 024338           20 AAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQA-LTFGGDVSKEADVESMIKTA   98 (269)
Q Consensus        20 ~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~-~~~~~Dls~~~~~~~~~~~~   98 (269)
                      +.+++++|++|||||++|||++++++|+++|++|++ .+|+++.++++.+++   +.++ .++.+|++|.++++++++++
T Consensus         5 ~~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~-~~r~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~   80 (254)
T 2wsb_A            5 TVFRLDGACAAVTGAGSGIGLEICRAFAASGARLIL-IDREAAALDRAAQEL---GAAVAARIVADVTDAEAMTAAAAEA   80 (254)
T ss_dssp             TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHH---GGGEEEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHh---cccceeEEEEecCCHHHHHHHHHHH
Confidence            456789999999999999999999999999999888 478888777776666   3466 88999999999999999999


Q ss_pred             HHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCC--hhh
Q 024338           99 VDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQ--ANY  176 (269)
Q Consensus        99 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~--~~Y  176 (269)
                      .+ ++++|+||||||.....++.+.+.+++++.+++|+.+++.+++.++|.|++++.++||++||..+..+.++.  ..|
T Consensus        81 ~~-~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y  159 (254)
T 2wsb_A           81 EA-VAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSY  159 (254)
T ss_dssp             HH-HSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCBHHH
T ss_pred             Hh-hCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCCCCcchHH
Confidence            88 899999999999887777888999999999999999999999999999988788999999999998888877  899


Q ss_pred             HHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC--hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCC
Q 024338          177 SAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG--EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAG  254 (269)
Q Consensus       177 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~  254 (269)
                      ++||++++.++++++.|+++.||++++|+||+++|++.....  +...+......|.+++.+|+|+|+++++|+ ++...
T Consensus       160 ~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~-~~~~~  238 (254)
T 2wsb_A          160 MASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTPMGRCGEPSEIAAAALFLA-SPAAS  238 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCHHHHHHHHHTSTTSSCBCHHHHHHHHHHHH-SGGGT
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHh-Ccccc
Confidence            999999999999999999999999999999999999765321  234445556678888899999999999999 45667


Q ss_pred             CccccEEEecCCcc
Q 024338          255 YITGQVLTIDGGMV  268 (269)
Q Consensus       255 ~~~G~~i~~dgg~~  268 (269)
                      +++|+++.+|||+.
T Consensus       239 ~~~G~~~~v~gG~~  252 (254)
T 2wsb_A          239 YVTGAILAVDGGYT  252 (254)
T ss_dssp             TCCSCEEEESTTGG
T ss_pred             cccCCEEEECCCEe
Confidence            89999999999975

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=100.00  E-value=3.7e-44  Score=298.25  Aligned_cols=242  Identities=49%  Similarity=0.841  Sum_probs=219.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEE-EEccCCCHHHHHHHHHHHHHhcCC
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALT-FGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~-~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      +|++|||||++|||++++++|+++|++|+++.+|+.+..+++.+++...+.++.. +.+|++|.++++++++++.+.+++
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG   80 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence            4899999999999999999999999999886588988888888888776667666 899999999999999999999999


Q ss_pred             ccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHHH
Q 024338          105 VDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVI  184 (269)
Q Consensus       105 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~  184 (269)
                      +|+||||||.....++.+.+.+++++.+++|+.+++.+++.++|.|++++.++||++||..+..+.++...|++||++++
T Consensus        81 ~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  160 (245)
T 2ph3_A           81 LDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPGQANYVASKAGLI  160 (245)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCSSBHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCCCCcchHHHHHHHH
Confidence            99999999988777788899999999999999999999999999998877899999999999999999999999999999


Q ss_pred             HHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEEEec
Q 024338          185 GLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTID  264 (269)
Q Consensus       185 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~d  264 (269)
                      .++++++.|+.+.||+++.|+||+++|++.....+...+......|.+++.+|+|+|++++++++ +...+++|+++.+|
T Consensus       161 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~-~~~~~~~G~~~~v~  239 (245)
T 2ph3_A          161 GFTRAVAKEYAQRGITVNAVAPGFIETEMTERLPQEVKEAYLKQIPAGRFGRPEEVAEAVAFLVS-EKAGYITGQTLCVD  239 (245)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHTS-GGGTTCCSCEEEES
T ss_pred             HHHHHHHHHHHHcCeEEEEEEEEeecCcchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-cccccccCCEEEEC
Confidence            99999999999999999999999999998766555555555666788888999999999999995 45668999999999


Q ss_pred             CCcc
Q 024338          265 GGMV  268 (269)
Q Consensus       265 gg~~  268 (269)
                      ||+.
T Consensus       240 gg~~  243 (245)
T 2ph3_A          240 GGLT  243 (245)
T ss_dssp             TTCS
T ss_pred             CCCC
Confidence            9975

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=100.00  E-value=6.1e-45  Score=303.37  Aligned_cols=233  Identities=24%  Similarity=0.324  Sum_probs=203.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEec--CCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYA--RSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~--r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      +|++|||||++|||++++++|+++|++|++++.  |+.+.++++.+++  .+       +|+.|.++++++++++.+.++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~--~~-------~~~~~~~~v~~~~~~~~~~~g   71 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN--PG-------TIALAEQKPERLVDATLQHGE   71 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS--TT-------EEECCCCCGGGHHHHHGGGSS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh--CC-------CcccCHHHHHHHHHHHHHHcC
Confidence            589999999999999999999999999888325  8888777766655  12       133377788899999999999


Q ss_pred             CccEEEEccCCCCC---CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhH
Q 024338          104 TVDILINNAGITRD---TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       104 ~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                      ++|+||||||....   .++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|++||
T Consensus        72 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  151 (244)
T 1zmo_A           72 AIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPAR  151 (244)
T ss_dssp             CEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTCTTHHHHH
T ss_pred             CCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCCCchHHHHHH
Confidence            99999999998877   788899999999999999999999999999999888889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCcc---cccC-hHHHHHHHh-cCCCCCCCCHHHHHHHHHHhccCCCCCC
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMT---AKLG-EDLEKKILE-KIPLGRYGQPEEVAGLVEFLALNPAAGY  255 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~---~~~~-~~~~~~~~~-~~~~~~~~~~~~~a~~~~~l~~~~~~~~  255 (269)
                      ++++.|+++++.|+++.||+||+|+||+++|++.   .... ++..+.... ..|++++.+|+|+|++++||+ ++.+++
T Consensus       152 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe~vA~~v~~l~-s~~~~~  230 (244)
T 1zmo_A          152 AATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENNPELRERVDRDVPLGRLGRPDEMGALITFLA-SRRAAP  230 (244)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHHCHHHHHHHHHHCTTCSCBCHHHHHHHHHHHH-TTTTGG
T ss_pred             HHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccchHHHHHHHhcCCCCCCCcCHHHHHHHHHHHc-CccccC
Confidence            9999999999999999999999999999999986   4321 122233334 678888999999999999999 567789


Q ss_pred             ccccEEEecCCcc
Q 024338          256 ITGQVLTIDGGMV  268 (269)
Q Consensus       256 ~~G~~i~~dgg~~  268 (269)
                      +||++|.+|||++
T Consensus       231 ~tG~~i~vdgG~~  243 (244)
T 1zmo_A          231 IVGQFFAFTGGYL  243 (244)
T ss_dssp             GTTCEEEESTTCC
T ss_pred             ccCCEEEeCCCCC
Confidence            9999999999985

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.5e-45  Score=310.97  Aligned_cols=241  Identities=28%  Similarity=0.408  Sum_probs=202.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCC-cEEEEEccCCCHHHHHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGG-QALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      .+++||++|||||++|||+++|++|+++|++|++ .+|+.+.++++.+++.+.+. .+.++.+|++|.++++++++++.+
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  107 (281)
T 4dry_A           29 GSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVI-TGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRA  107 (281)
T ss_dssp             -----CEEEETTTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999888 58899888888888866543 358899999999999999999999


Q ss_pred             hcCCccEEEEccCCCCC-CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC--CCeEEEEcCCccccCCCCChhhH
Q 024338          101 AWGTVDILINNAGITRD-TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK--KGRIINIASVVGLVGNIGQANYS  177 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~iv~isS~~~~~~~~~~~~Y~  177 (269)
                      .++++|+||||||.... .++.+.+.++|++.+++|+.+++.++++++|.|.+++  .|+||++||..+..+.++...|+
T Consensus       108 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~  187 (281)
T 4dry_A          108 EFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYT  187 (281)
T ss_dssp             HHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCTTCHHHH
T ss_pred             HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCCCChhHH
Confidence            99999999999998654 6788999999999999999999999999999998765  78999999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCcc
Q 024338          178 AAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYIT  257 (269)
Q Consensus       178 ~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~  257 (269)
                      +||+++++|+++++.|+++.||+||+|+||+++|++.....+...+ .....+.+++.+|+|+|++++||++.+....++
T Consensus       188 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~~pedvA~~v~fL~s~~~~~~i~  266 (281)
T 4dry_A          188 ATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMSTGVLQ-ANGEVAAEPTIPIEHIAEAVVYMASLPLSANVL  266 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------CEEEC-TTSCEEECCCBCHHHHHHHHHHHHHSCTTEEEE
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcchhhh-hhhcccccCCCCHHHHHHHHHHHhCCCccCccc
Confidence            9999999999999999999999999999999999987644321110 112234566789999999999999888877777


Q ss_pred             ccEEEec
Q 024338          258 GQVLTID  264 (269)
Q Consensus       258 G~~i~~d  264 (269)
                      +.+|.-.
T Consensus       267 ~~~i~p~  273 (281)
T 4dry_A          267 TMTVMAT  273 (281)
T ss_dssp             EEEEEET
T ss_pred             cEEEEec
Confidence            7766543

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=100.00  E-value=2.2e-44  Score=298.37  Aligned_cols=225  Identities=20%  Similarity=0.278  Sum_probs=192.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      +++|++|||||++|||++++++|+++|++|++ .+|+.+.++++.+++.   .++.++.+|++|.++++++++++.+.++
T Consensus         1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~~V~~-~~r~~~~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~~~g   76 (235)
T 3l6e_A            1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSM-MGRRYQRLQQQELLLG---NAVIGIVADLAHHEDVDVAFAAAVEWGG   76 (235)
T ss_dssp             --CCEEEEESTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHG---GGEEEEECCTTSHHHHHHHHHHHHHHHC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHhc---CCceEEECCCCCHHHHHHHHHHHHHhcC
Confidence            35799999999999999999999999999888 5889888888877773   3688999999999999999999999999


Q ss_pred             CccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHH
Q 024338          104 TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGV  183 (269)
Q Consensus       104 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al  183 (269)
                      ++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|++++ ++||++||..+..+.++...|++||+++
T Consensus        77 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~~~~~~Y~asKaa~  155 (235)
T 3l6e_A           77 LPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG-GVLANVLSSAAQVGKANESLYCASKWGM  155 (235)
T ss_dssp             SCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-EEEEEECCEECCSSCSSHHHHHHHHHHH
T ss_pred             CCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEEeCHHhcCCCCCCcHHHHHHHHH
Confidence            999999999998778888999999999999999999999999999997654 5999999999999999999999999999


Q ss_pred             HHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEEE
Q 024338          184 IGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLT  262 (269)
Q Consensus       184 ~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~  262 (269)
                      ++|+++++.|+++.||+||+|+||+++|++......         .+..++.+|+|+|+.++++++++...+++|-.+.
T Consensus       156 ~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~---------~~~~~~~~pedvA~~v~~l~~~~~~~~i~~i~~~  225 (235)
T 3l6e_A          156 RGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTDH---------VDPSGFMTPEDAAAYMLDALEARSSCHVTDLFIG  225 (235)
T ss_dssp             HHHHHHHHHHTTTSSEEEEEEEEEEECCCC--------------------CBCHHHHHHHHHHHTCCCSSEEEEEEEEE
T ss_pred             HHHHHHHHHHhhccCCEEEEEeCCCccCcchhccCC---------CCCcCCCCHHHHHHHHHHHHhCCCCcceeeEEEe
Confidence            999999999999999999999999999998654322         1233567999999999999987888888886664

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=100.00  E-value=6.1e-44  Score=300.30  Aligned_cols=247  Identities=33%  Similarity=0.490  Sum_probs=214.9

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHH-cCCcEEEEEccCCCHHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEA-SGGQALTFGGDVSKEADVESMIKTAV   99 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dls~~~~~~~~~~~~~   99 (269)
                      .+++++|++|||||++|||++++++|+++|++|+++ .|+.+...+..+++.+ .+.++.++.+|++|.++++++++++.
T Consensus         9 ~~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   87 (265)
T 1h5q_A            9 TISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVI-YRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQID   87 (265)
T ss_dssp             EECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEE-ESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CcccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEE-eCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHH
Confidence            456889999999999999999999999999999885 5654444444455533 36678999999999999999999999


Q ss_pred             HhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCeEEEEcCCccccCCCC------
Q 024338          100 DAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK-KGRIINIASVVGLVGNIG------  172 (269)
Q Consensus       100 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~------  172 (269)
                      +.++++|+||||||.....++.+.+.+++++.+++|+.+++.++++++|.|.+++ .++||++||..+..+.+.      
T Consensus        88 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~  167 (265)
T 1h5q_A           88 ADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSL  167 (265)
T ss_dssp             HHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEEC
T ss_pred             HhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccccccccc
Confidence            9999999999999988777888899999999999999999999999999997655 589999999988776542      


Q ss_pred             -ChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCC
Q 024338          173 -QANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNP  251 (269)
Q Consensus       173 -~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~  251 (269)
                       ...|++||++++.|+++++.|+++.||++++|+||+++|++.....+..........|.+++.+|+|+|+++++|+ ++
T Consensus       168 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~-~~  246 (265)
T 1h5q_A          168 TQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASNIPLNRFAQPEEMTGQAILLL-SD  246 (265)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHH-SG
T ss_pred             cccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccchhHHHHHHhcCcccCCCCHHHHHHHHHhhc-cC
Confidence             7899999999999999999999999999999999999999877665555555566778888999999999999999 45


Q ss_pred             CCCCccccEEEecCCccC
Q 024338          252 AAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       252 ~~~~~~G~~i~~dgg~~~  269 (269)
                      ++.+++|++|.+|||+.+
T Consensus       247 ~~~~~~G~~~~v~gG~~~  264 (265)
T 1h5q_A          247 HATYMTGGEYFIDGGQLI  264 (265)
T ss_dssp             GGTTCCSCEEEECTTGGG
T ss_pred             chhcCcCcEEEecCCEeC
Confidence            667899999999999853

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=100.00  E-value=2.9e-45  Score=305.27  Aligned_cols=230  Identities=25%  Similarity=0.356  Sum_probs=200.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHH-cCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGK-AGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~-~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      .++|++|||||++|||+++|++|++ .|+.|++ .+|+++.          ...++.++.+|++|.++++++++.+.  +
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~-~~~~~~~----------~~~~~~~~~~Dv~~~~~v~~~~~~~~--~   68 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVIN-IDIQQSF----------SAENLKFIKADLTKQQDITNVLDIIK--N   68 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEE-EESSCCC----------CCTTEEEEECCTTCHHHHHHHHHHTT--T
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEE-ecccccc----------ccccceEEecCcCCHHHHHHHHHHHH--h
Confidence            3579999999999999999999999 7888777 4555431          12357889999999999999996554  6


Q ss_pred             CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHH
Q 024338          103 GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAG  182 (269)
Q Consensus       103 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  182 (269)
                      +++|+||||||+....++.+.+.++|++.+++|+.+++.++++++|.|+++  ++||++||..+..+.++...|++||++
T Consensus        69 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--g~iv~~sS~~~~~~~~~~~~Y~asKaa  146 (244)
T 4e4y_A           69 VSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVG--ASIVFNGSDQCFIAKPNSFAYTLSKGA  146 (244)
T ss_dssp             CCEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEE--EEEEEECCGGGTCCCTTBHHHHHHHHH
T ss_pred             CCCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccC--cEEEEECCHHHccCCCCCchhHHHHHH
Confidence            799999999999888888999999999999999999999999999998543  899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChH-----------HHHHHHhcCCCCCCCCHHHHHHHHHHhccCC
Q 024338          183 VIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGED-----------LEKKILEKIPLGRYGQPEEVAGLVEFLALNP  251 (269)
Q Consensus       183 l~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~  251 (269)
                      ++.|+++++.|++++||+||+|+||+++|++.......           .........|.+++.+|+|+|++++||+ ++
T Consensus       147 ~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~-s~  225 (244)
T 4e4y_A          147 IAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIFLL-SD  225 (244)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHH-SG
T ss_pred             HHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcCCCCCCcCHHHHHHHHHHHh-cC
Confidence            99999999999999999999999999999986544222           3345566788899999999999999999 55


Q ss_pred             CCCCccccEEEecCCccC
Q 024338          252 AAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       252 ~~~~~~G~~i~~dgg~~~  269 (269)
                      ++.++||++|.+|||+++
T Consensus       226 ~~~~itG~~i~vdGG~~~  243 (244)
T 4e4y_A          226 KSKFMTGGLIPIDGGYTA  243 (244)
T ss_dssp             GGTTCCSCEEEESTTGGG
T ss_pred             ccccccCCeEeECCCccC
Confidence            678999999999999864

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=100.00  E-value=2.7e-44  Score=303.15  Aligned_cols=239  Identities=24%  Similarity=0.346  Sum_probs=205.9

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      ..++.+|++|||||++|||+++|+.|+++|++|++ .+|+.+.++++.      ..++.++.+|++|.++++++++++.+
T Consensus        11 ~~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~-~~r~~~~~~~~~------~~~~~~~~~Dv~d~~~v~~~~~~~~~   83 (266)
T 3p19_A           11 GRGSMKKLVVITGASSGIGEAIARRFSEEGHPLLL-LARRVERLKALN------LPNTLCAQVDVTDKYTFDTAITRAEK   83 (266)
T ss_dssp             ----CCCEEEEESTTSHHHHHHHHHHHHTTCCEEE-EESCHHHHHTTC------CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEE-EECCHHHHHHhh------cCCceEEEecCCCHHHHHHHHHHHHH
Confidence            34578999999999999999999999999999988 478776554332      23688899999999999999999999


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhH
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                      .++++|+||||||+....++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|++||
T Consensus        84 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asK  163 (266)
T 3p19_A           84 IYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTK  163 (266)
T ss_dssp             HHCSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             HCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCCCCchHHHHH
Confidence            99999999999999888888999999999999999999999999999999888889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHH-HHHHH-hcCCCCCCCCHHHHHHHHHHhccCCCCCCccc
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDL-EKKIL-EKIPLGRYGQPEEVAGLVEFLALNPAAGYITG  258 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G  258 (269)
                      +++++|+++++.|+++.||+||+|+||+++|++........ ..... ...|++++.+|+|+|++++||++.+ .....+
T Consensus       164 ~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~av~~l~~~~-~~~~~~  242 (266)
T 3p19_A          164 FAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAWRVDMGGVLAADDVARAVLFAYQQP-QNVCIR  242 (266)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHHHHHHTTCCBCHHHHHHHHHHHHHSC-TTEEEE
T ss_pred             HHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhhhHHHHhhcccccCCCCHHHHHHHHHHHHcCC-CCccce
Confidence            99999999999999999999999999999999877654332 22222 2347788899999999999999665 446777


Q ss_pred             cEEEecCCc
Q 024338          259 QVLTIDGGM  267 (269)
Q Consensus       259 ~~i~~dgg~  267 (269)
                      +++....+.
T Consensus       243 ~i~i~p~~~  251 (266)
T 3p19_A          243 EIALAPTKQ  251 (266)
T ss_dssp             EEEEEETTC
T ss_pred             eeEEecCCC
Confidence            777665543

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=100.00  E-value=2e-44  Score=302.73  Aligned_cols=238  Identities=26%  Similarity=0.298  Sum_probs=208.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHH---cCCcEEEEecCCHHHHHHHHHHHHHc--CCcEEEEEccCCCHHHHHHHHHH
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGK---AGCKVLVNYARSSKEAEEVCKEIEAS--GGQALTFGGDVSKEADVESMIKT   97 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~---~G~~v~i~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dls~~~~~~~~~~~   97 (269)
                      ++++|++|||||++|||++++++|++   +|++|++ .+|+.+.++++.+++.+.  +.++.++.+|++|.+++++++++
T Consensus         3 ~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   81 (259)
T 1oaa_A            3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLV-SARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSA   81 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEE-EESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEE-EeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHH
Confidence            56799999999999999999999999   8999988 588888888888888664  56789999999999999999999


Q ss_pred             HHH--hcCCcc--EEEEccCCCCC--CcccC-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC--CCCeEEEEcCCcccc
Q 024338           98 AVD--AWGTVD--ILINNAGITRD--TLLMR-MKKSQWQDVIDLNLTGVFLCTQAAAKIMMKK--KKGRIINIASVVGLV  168 (269)
Q Consensus        98 ~~~--~~~~id--~li~~ag~~~~--~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~--~~~~iv~isS~~~~~  168 (269)
                      +.+  .++++|  +||||||+...  .++.+ .+.++|++.+++|+.+++.++++++|.|+++  +.|+||++||..+..
T Consensus        82 ~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~  161 (259)
T 1oaa_A           82 VRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ  161 (259)
T ss_dssp             HHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS
T ss_pred             HHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcC
Confidence            988  678899  99999998643  45677 7899999999999999999999999999776  568999999999999


Q ss_pred             CCCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc-----ChHHHHHHHhcCCCCCCCCHHHHHHH
Q 024338          169 GNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL-----GEDLEKKILEKIPLGRYGQPEEVAGL  243 (269)
Q Consensus       169 ~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~a~~  243 (269)
                      +.++...|++||++++.|+++++.|+++  |+||+|+||+++|++....     .+...+......|.+++.+|+|+|+.
T Consensus       162 ~~~~~~~Y~asKaa~~~~~~~la~e~~~--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~  239 (259)
T 1oaa_A          162 PYKGWGLYCAGKAARDMLYQVLAAEEPS--VRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQK  239 (259)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHCTT--EEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHHHHHHH
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHhhCCC--ceEEEecCCCcCcchHHHHhhccCChhHHHHHHHhhhcCCcCCHHHHHHH
Confidence            9999999999999999999999999974  9999999999999986532     22333344455577888899999999


Q ss_pred             HHHhccCCCCCCccccEEEecC
Q 024338          244 VEFLALNPAAGYITGQVLTIDG  265 (269)
Q Consensus       244 ~~~l~~~~~~~~~~G~~i~~dg  265 (269)
                      ++||++ + ..++|||+|.+||
T Consensus       240 v~~l~~-~-~~~itG~~i~vdg  259 (259)
T 1oaa_A          240 LLGLLQ-K-DTFQSGAHVDFYD  259 (259)
T ss_dssp             HHHHHH-H-CCSCTTEEEETTC
T ss_pred             HHHHHh-h-ccccCCcEEeccC
Confidence            999995 3 5799999999986

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=100.00  E-value=2e-44  Score=301.91  Aligned_cols=245  Identities=30%  Similarity=0.493  Sum_probs=218.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCC-HHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARS-SKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~-~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      .++++|++|||||++|||++++++|+++|++|+++ .|+ ++.++++.++++..+.++.++.+|++|.++++++++++.+
T Consensus         3 ~~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (258)
T 3afn_B            3 PDLKGKRVLITGSSQGIGLATARLFARAGAKVGLH-GRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVA   81 (258)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEE-ESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEE-CCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            35689999999999999999999999999999885 666 7777777788877777899999999999999999999999


Q ss_pred             hcCCccEEEEccCC-CCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC--C---CeEEEEcCCcccc-CCCCC
Q 024338          101 AWGTVDILINNAGI-TRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK--K---GRIINIASVVGLV-GNIGQ  173 (269)
Q Consensus       101 ~~~~id~li~~ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~---~~iv~isS~~~~~-~~~~~  173 (269)
                      +++++|+||||||. ....++.+.+.+++++.+++|+.+++.++++++|.|.+++  .   ++||++||..+.. +.++.
T Consensus        82 ~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~  161 (258)
T 3afn_B           82 KFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGA  161 (258)
T ss_dssp             HHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCCTTC
T ss_pred             HcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCCCCc
Confidence            99999999999998 6667788899999999999999999999999999997543  3   8999999999988 88899


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCC
Q 024338          174 ANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAA  253 (269)
Q Consensus       174 ~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~  253 (269)
                      ..|++||++++.++++++.|+++.||++++|+||+++|++.....+...+......|.+++.+|+|+|++++++++ +..
T Consensus       162 ~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~-~~~  240 (258)
T 3afn_B          162 GLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKTQDVRDRISNGIPMGRFGTAEEMAPAFLFFAS-HLA  240 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTCCHHHHHHHHTTCTTCSCBCGGGTHHHHHHHHC-HHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccccCHHHHHHHhccCCCCcCCCHHHHHHHHHHHhC-cch
Confidence            9999999999999999999999999999999999999998766555555566667788889999999999999994 444


Q ss_pred             C-CccccEEEecCCcc
Q 024338          254 G-YITGQVLTIDGGMV  268 (269)
Q Consensus       254 ~-~~~G~~i~~dgg~~  268 (269)
                      . +++|++|.+|||+.
T Consensus       241 ~~~~~G~~~~v~gg~~  256 (258)
T 3afn_B          241 SGYITGQVLDINGGQY  256 (258)
T ss_dssp             HTTCCSEEEEESTTSS
T ss_pred             hccccCCEEeECCCcc
Confidence            4 89999999999975

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=100.00  E-value=2.8e-44  Score=323.52  Aligned_cols=241  Identities=34%  Similarity=0.556  Sum_probs=206.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCH--HHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSS--KEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAV   99 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~--~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~   99 (269)
                      ..+++|++|||||++|||+++|++|+++|++|+++ +|+.  +.+++..+++     ...++.||++|.++++++++++.
T Consensus       209 ~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~-~r~~~~~~l~~~~~~~-----~~~~~~~Dvtd~~~v~~~~~~~~  282 (454)
T 3u0b_A          209 KPLDGKVAVVTGAARGIGATIAEVFARDGATVVAI-DVDGAAEDLKRVADKV-----GGTALTLDVTADDAVDKITAHVT  282 (454)
T ss_dssp             STTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEE-ECGGGHHHHHHHHHHH-----TCEEEECCTTSTTHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEE-eCCccHHHHHHHHHHc-----CCeEEEEecCCHHHHHHHHHHHH
Confidence            45689999999999999999999999999998874 5643  2233333332     34578999999999999999999


Q ss_pred             HhcCC-ccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHH
Q 024338          100 DAWGT-VDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSA  178 (269)
Q Consensus       100 ~~~~~-id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~  178 (269)
                      +.+++ ||+||||||+.....+.+.+.++|++.+++|+.+++++.++++|.|.+++.++||++||..+..+.+++..|++
T Consensus       283 ~~~g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~g~~~Yaa  362 (454)
T 3u0b_A          283 EHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYAT  362 (454)
T ss_dssp             HHSTTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCTTCHHHHH
T ss_pred             HHcCCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCCCCHHHHH
Confidence            99986 99999999998888899999999999999999999999999999998778899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccc
Q 024338          179 AKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITG  258 (269)
Q Consensus       179 sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G  258 (269)
                      ||+++++|+++++.|++++||+||+|+||+++|++.........+......++++..+|+|+|++++||+ ++.++++||
T Consensus       363 sKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~l~r~g~pedvA~~v~fL~-s~~a~~itG  441 (454)
T 3u0b_A          363 TKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLATREVGRRLNSLFQGGQPVDVAELIAYFA-SPASNAVTG  441 (454)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC----------CHHHHHSBTTSSCBCHHHHHHHHHHHH-CGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchhhHHHHHhhccccCCCCHHHHHHHHHHHh-CCccCCCCC
Confidence            9999999999999999999999999999999999876654433334444567788889999999999999 567889999


Q ss_pred             cEEEecCCccC
Q 024338          259 QVLTIDGGMVM  269 (269)
Q Consensus       259 ~~i~~dgg~~~  269 (269)
                      |+|.+|||+++
T Consensus       442 ~~i~vdGG~~l  452 (454)
T 3u0b_A          442 NTIRVCGQAML  452 (454)
T ss_dssp             CEEEESSSBSC
T ss_pred             cEEEECCcccc
Confidence            99999999875

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=100.00  E-value=6.6e-44  Score=297.38  Aligned_cols=233  Identities=25%  Similarity=0.391  Sum_probs=206.8

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcC-CcEEEEEccC--CCHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASG-GQALTFGGDV--SKEADVESMIKT   97 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dl--s~~~~~~~~~~~   97 (269)
                      +..+++|++|||||++|||++++++|+++|++|++ .+|+.+.++++.++++..+ .+..++.+|+  +|.+++++++++
T Consensus         9 ~~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~   87 (247)
T 3i1j_A            9 PELLKGRVILVTGAARGIGAAAARAYAAHGASVVL-LGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAAR   87 (247)
T ss_dssp             TTTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHH
T ss_pred             CccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEE-EecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHH
Confidence            45689999999999999999999999999999888 5899999999988887764 4566777777  999999999999


Q ss_pred             HHHhcCCccEEEEccCCC-CCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhh
Q 024338           98 AVDAWGTVDILINNAGIT-RDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANY  176 (269)
Q Consensus        98 ~~~~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y  176 (269)
                      +.+.++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.++...|
T Consensus        88 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y  167 (247)
T 3i1j_A           88 VEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAY  167 (247)
T ss_dssp             HHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCCTTCHHH
T ss_pred             HHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCCCCcchh
Confidence            999999999999999985 4567889999999999999999999999999999988888999999999999999999999


Q ss_pred             HHhHHHHHHHHHHHHHHhcc-CCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCC
Q 024338          177 SAAKAGVIGLTKTVAKEYAS-RNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGY  255 (269)
Q Consensus       177 ~~sK~al~~~~~~la~e~~~-~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~  255 (269)
                      ++||++++.|+++++.|+++ .||+|++|+||+++|++.....+        .....+..+|+|+|+.++||+ ++++++
T Consensus       168 ~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~~~~~~--------~~~~~~~~~p~dva~~~~~l~-s~~~~~  238 (247)
T 3i1j_A          168 GVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMRAQAYP--------DENPLNNPAPEDIMPVYLYLM-GPDSTG  238 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHHHHHST--------TSCGGGSCCGGGGTHHHHHHH-SGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccchhccc--------ccCccCCCCHHHHHHHHHHHh-Cchhcc
Confidence            99999999999999999977 79999999999999997543211        111223568999999999999 567889


Q ss_pred             ccccEEEe
Q 024338          256 ITGQVLTI  263 (269)
Q Consensus       256 ~~G~~i~~  263 (269)
                      +|||+|.+
T Consensus       239 itG~~i~~  246 (247)
T 3i1j_A          239 INGQALNA  246 (247)
T ss_dssp             CCSCEEEC
T ss_pred             ccCeeecC
Confidence            99999986

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=100.00  E-value=2.9e-44  Score=301.05  Aligned_cols=234  Identities=26%  Similarity=0.355  Sum_probs=203.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCcc
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVD  106 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id  106 (269)
                      |++|||||++|||++++++|+++|++|++ .+|+.+.++++.+ +...+.++..+     |.++++++++++.+.++++|
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~-~~r~~~~~~~~~~-l~~~~~~~~~~-----d~~~v~~~~~~~~~~~g~iD   74 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVAC-HDESFKQKDELEA-FAETYPQLKPM-----SEQEPAELIEAVTSAYGQVD   74 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEE-CCGGGGSHHHHHH-HHHHCTTSEEC-----CCCSHHHHHHHHHHHHSCCC
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHH-HHhcCCcEEEE-----CHHHHHHHHHHHHHHhCCCC
Confidence            78999999999999999999999999888 5787776666655 65545554443     66778899999999999999


Q ss_pred             EEEEccCCC-CCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHHHH
Q 024338          107 ILINNAGIT-RDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIG  185 (269)
Q Consensus       107 ~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~  185 (269)
                      +||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.++...|++||++++.
T Consensus        75 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~  154 (254)
T 1zmt_A           75 VLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACT  154 (254)
T ss_dssp             EEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHH
T ss_pred             EEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCCCchHHHHHHHHHHH
Confidence            999999987 6678889999999999999999999999999999988788999999999999999999999999999999


Q ss_pred             HHHHHHHHhccCCeEEEEEecCCc---------cCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCc
Q 024338          186 LTKTVAKEYASRNINVNAIAPGFI---------ASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYI  256 (269)
Q Consensus       186 ~~~~la~e~~~~gi~v~~v~pG~v---------~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~  256 (269)
                      |+++++.|+++.||+||+|+||++         +|++.... ++..+......|++++.+|+|+|++++||+ ++.++++
T Consensus       155 ~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~-~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~-s~~~~~~  232 (254)
T 1zmt_A          155 LANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTN-PEHVAHVKKVTALQRLGTQKELGELVAFLA-SGSCDYL  232 (254)
T ss_dssp             HHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTC-HHHHHHHHHHSSSSSCBCHHHHHHHHHHHH-TTSCGGG
T ss_pred             HHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccC-hHHHHHHhccCCCCCCcCHHHHHHHHHHHh-CcccCCc
Confidence            999999999999999999999999         77765432 333344455678888999999999999999 4567799


Q ss_pred             cccEEEecCCccC
Q 024338          257 TGQVLTIDGGMVM  269 (269)
Q Consensus       257 ~G~~i~~dgg~~~  269 (269)
                      +|++|.+|||+.+
T Consensus       233 tG~~~~vdgG~~~  245 (254)
T 1zmt_A          233 TGQVFWLAGGFPM  245 (254)
T ss_dssp             TTCEEEESTTCCC
T ss_pred             cCCEEEECCCchh
Confidence            9999999999863

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=100.00  E-value=1.7e-43  Score=298.98  Aligned_cols=249  Identities=33%  Similarity=0.554  Sum_probs=218.2

Q ss_pred             cccccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHH
Q 024338           17 TNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIK   96 (269)
Q Consensus        17 ~~~~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~   96 (269)
                      +....+++++|++|||||++|||++++++|+++|++|+++.+++.+..+++.++++..+.++.++.+|++|.++++++++
T Consensus        12 ~~~~~~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~   91 (274)
T 1ja9_A           12 PSDASKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFD   91 (274)
T ss_dssp             ----CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCCCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHH
Confidence            34455788999999999999999999999999999998864448888888888887777789999999999999999999


Q ss_pred             HHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccc-cCCCCChh
Q 024338           97 TAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGL-VGNIGQAN  175 (269)
Q Consensus        97 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~-~~~~~~~~  175 (269)
                      ++.+.++++|+||||||.....++.+.+.+++++.+++|+.+++.++++++|.|+ + +++||++||..+. .+.++...
T Consensus        92 ~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~-~~~iv~~sS~~~~~~~~~~~~~  169 (274)
T 1ja9_A           92 KAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCR-R-GGRIILTSSIAAVMTGIPNHAL  169 (274)
T ss_dssp             HHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEE-E-EEEEEEECCGGGTCCSCCSCHH
T ss_pred             HHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHh-h-CCEEEEEcChHhccCCCCCCch
Confidence            9999999999999999988777788899999999999999999999999999986 3 3899999999998 78889999


Q ss_pred             hHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccc------------ccC-hHHHHHHHhcCCCCCCCCHHHHHH
Q 024338          176 YSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTA------------KLG-EDLEKKILEKIPLGRYGQPEEVAG  242 (269)
Q Consensus       176 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~------------~~~-~~~~~~~~~~~~~~~~~~~~~~a~  242 (269)
                      |++||++++.++++++.|+++.||+++.++||+++|++..            ... +..........+.+++.+|+|+|+
T Consensus       170 Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  249 (274)
T 1ja9_A          170 YAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGR  249 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcCCCCCccCHHHHHH
Confidence            9999999999999999999999999999999999999765            222 333444556678888999999999


Q ss_pred             HHHHhccCCCCCCccccEEEecCCcc
Q 024338          243 LVEFLALNPAAGYITGQVLTIDGGMV  268 (269)
Q Consensus       243 ~~~~l~~~~~~~~~~G~~i~~dgg~~  268 (269)
                      ++++|++ +...+++|++|.+|||++
T Consensus       250 ~i~~l~~-~~~~~~~G~~~~v~gG~~  274 (274)
T 1ja9_A          250 AVSALCQ-EESEWINGQVIKLTGGGI  274 (274)
T ss_dssp             HHHHHHS-GGGTTCCSCEEEESTTCC
T ss_pred             HHHHHhC-cccccccCcEEEecCCcC
Confidence            9999994 456789999999999975

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=100.00  E-value=1.7e-45  Score=319.64  Aligned_cols=241  Identities=17%  Similarity=0.227  Sum_probs=203.8

Q ss_pred             CCCEEEEeCCCC--chHHHHHHHHHHcCCcEEEEecCCHH---------HHHHHHHHHHH---cCCcEEEEEccCCCH--
Q 024338           25 EAPVAVVTGASR--GIGRAVATSLGKAGCKVLVNYARSSK---------EAEEVCKEIEA---SGGQALTFGGDVSKE--   88 (269)
Q Consensus        25 ~~k~vlItGas~--giG~~~a~~l~~~G~~v~i~~~r~~~---------~~~~~~~~l~~---~~~~~~~~~~Dls~~--   88 (269)
                      .+|++|||||++  |||+++|++|+++|++|+++ .+++.         .++...+....   ....+.++.+|+++.  
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~-~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   79 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFG-IWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTA   79 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSG
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEE-ecCccccccccchHHHHHHHHHHHhhcccccccccccccccccch
Confidence            379999999985  99999999999999999974 44431         11111111111   123467889999988  


Q ss_pred             H------------------HHHHHHHHHHHhcCCccEEEEccCCC--CCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHH
Q 024338           89 A------------------DVESMIKTAVDAWGTVDILINNAGIT--RDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAK  148 (269)
Q Consensus        89 ~------------------~~~~~~~~~~~~~~~id~li~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  148 (269)
                      +                  +++++++++.++++++|+||||||+.  ...++.+.+.++|++.+++|+.+++.++++++|
T Consensus        80 ~~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p  159 (329)
T 3lt0_A           80 NDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVN  159 (329)
T ss_dssp             GGCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred             hhhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            7                  99999999999999999999999974  357888999999999999999999999999999


Q ss_pred             HHHhCCCCeEEEEcCCccccCCCCCh-hhHHhHHHHHHHHHHHHHHhcc-CCeEEEEEecCCccCCcccccCh-------
Q 024338          149 IMMKKKKGRIINIASVVGLVGNIGQA-NYSAAKAGVIGLTKTVAKEYAS-RNINVNAIAPGFIASDMTAKLGE-------  219 (269)
Q Consensus       149 ~l~~~~~~~iv~isS~~~~~~~~~~~-~Y~~sK~al~~~~~~la~e~~~-~gi~v~~v~pG~v~t~~~~~~~~-------  219 (269)
                      .|+++  |+||++||..+..+.++.. .|++||+|+.+|+++|+.|+++ .||+||+|+||+++|++......       
T Consensus       160 ~m~~~--g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~  237 (329)
T 3lt0_A          160 IMKPQ--SSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYEN  237 (329)
T ss_dssp             GEEEE--EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHTCC--------
T ss_pred             HHhhC--CeEEEEeCccccCCCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechhHhhhhhhcccccc
Confidence            99654  8999999999999999996 9999999999999999999998 89999999999999998765421       


Q ss_pred             --------------------------------------HHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEE
Q 024338          220 --------------------------------------DLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL  261 (269)
Q Consensus       220 --------------------------------------~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i  261 (269)
                                                            +..+......|++++.+|+|+|++++||+ +++++++||++|
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~fL~-s~~a~~itG~~i  316 (329)
T 3lt0_A          238 NTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLL-SRESRAITGQTI  316 (329)
T ss_dssp             ----------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHH-SGGGTTCCSCEE
T ss_pred             cccccccccccccchhhcccccchhhhhhhhcccchhHHHHHHHhhcCcccCcCCHHHHHHHHHHHh-CchhccccCcEE
Confidence                                                  11344566789999999999999999999 567889999999


Q ss_pred             EecCCccC
Q 024338          262 TIDGGMVM  269 (269)
Q Consensus       262 ~~dgg~~~  269 (269)
                      .+|||+.+
T Consensus       317 ~vdGG~~~  324 (329)
T 3lt0_A          317 YVDNGLNI  324 (329)
T ss_dssp             EESTTGGG
T ss_pred             EEcCCeeE
Confidence            99999864

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=100.00  E-value=4.2e-43  Score=300.87  Aligned_cols=247  Identities=26%  Similarity=0.451  Sum_probs=216.2

Q ss_pred             ccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHc-CCcEEEEEccCCCHHHHHHHHHHH
Q 024338           20 AAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS-GGQALTFGGDVSKEADVESMIKTA   98 (269)
Q Consensus        20 ~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dls~~~~~~~~~~~~   98 (269)
                      ..+++++|++|||||++|||++++++|+++|++|++ .+|+.+.++++.+++.+. +.++.++.+|++|.++++++++++
T Consensus        20 ~~~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   98 (302)
T 1w6u_A           20 PPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVI-ASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSEL   98 (302)
T ss_dssp             CTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CcccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHH
Confidence            345689999999999999999999999999999888 588888888888887665 678999999999999999999999


Q ss_pred             HHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hCCCCeEEEEcCCccccCCCCChhhH
Q 024338           99 VDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMM-KKKKGRIINIASVVGLVGNIGQANYS  177 (269)
Q Consensus        99 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~-~~~~~~iv~isS~~~~~~~~~~~~Y~  177 (269)
                      .+.++++|+||||||.....++.+.+.+++++.+++|+.+++.++++++|.|. +++.++||++||..+..+.++...|+
T Consensus        99 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  178 (302)
T 1w6u_A           99 IKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSA  178 (302)
T ss_dssp             HHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHH
T ss_pred             HHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCCCcchhH
Confidence            99999999999999987777788899999999999999999999999999997 45668999999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCC-cccccCh--HHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCC
Q 024338          178 AAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASD-MTAKLGE--DLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAG  254 (269)
Q Consensus       178 ~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~  254 (269)
                      +||++++.|+++++.++++.||++++|+||+++|+ +.....+  ..........|.+++.+|+|+|+++++|+ ++...
T Consensus       179 ~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~~~l~-~~~~~  257 (302)
T 1w6u_A          179 SAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLC-SDYAS  257 (302)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHHHHHHHHHT-SGGGT
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcCCcCCCCCHHHHHHHHHHHc-CCccc
Confidence            99999999999999999999999999999999998 4333222  12234556678888899999999999999 45667


Q ss_pred             CccccEEEecCCcc
Q 024338          255 YITGQVLTIDGGMV  268 (269)
Q Consensus       255 ~~~G~~i~~dgg~~  268 (269)
                      +++|++|.+|||+.
T Consensus       258 ~~~G~~~~v~gg~~  271 (302)
T 1w6u_A          258 WINGAVIKFDGGEE  271 (302)
T ss_dssp             TCCSCEEEESTTHH
T ss_pred             ccCCCEEEECCCee
Confidence            89999999999963

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=100.00  E-value=1.1e-42  Score=294.64  Aligned_cols=249  Identities=27%  Similarity=0.481  Sum_probs=213.0

Q ss_pred             cccccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHH
Q 024338           17 TNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIK   96 (269)
Q Consensus        17 ~~~~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~   96 (269)
                      +....+++++|++|||||++|||++++++|+++|++|+++ +|+.+..+++.+++.. ..++.++.+|++|.++++++++
T Consensus         7 ~~~~~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~   84 (278)
T 2bgk_A            7 PDSSTNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIA-DIADDHGQKVCNNIGS-PDVISFVHCDVTKDEDVRNLVD   84 (278)
T ss_dssp             ----CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEE-ESCHHHHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCcccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE-cCChhHHHHHHHHhCC-CCceEEEECCCCCHHHHHHHHH
Confidence            3445577899999999999999999999999999998884 7887777666666632 2378899999999999999999


Q ss_pred             HHHHhcCCccEEEEccCCCCC--CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCC-CC
Q 024338           97 TAVDAWGTVDILINNAGITRD--TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNI-GQ  173 (269)
Q Consensus        97 ~~~~~~~~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~-~~  173 (269)
                      ++.+.++++|+||||||....  .++.+.+.+++++.+++|+.+++.++++++|.|.+++.++||++||..+..+.+ +.
T Consensus        85 ~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~  164 (278)
T 2bgk_A           85 TTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVS  164 (278)
T ss_dssp             HHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSC
T ss_pred             HHHHHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCCCCC
Confidence            999999999999999997643  567888999999999999999999999999999887889999999999998888 88


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC---hHHHHHHHhc--CCCCCCCCHHHHHHHHHHhc
Q 024338          174 ANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG---EDLEKKILEK--IPLGRYGQPEEVAGLVEFLA  248 (269)
Q Consensus       174 ~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~---~~~~~~~~~~--~~~~~~~~~~~~a~~~~~l~  248 (269)
                      ..|++||++++.++++++.|+++.||++++|+||+++|++.....   +...+.....  .+.+++.+|+|+|+++++|+
T Consensus       165 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  244 (278)
T 2bgk_A          165 HVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLA  244 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhcccccccccCCHHHHHHHHHHHc
Confidence            899999999999999999999999999999999999999865432   2333333332  34577889999999999999


Q ss_pred             cCCCCCCccccEEEecCCcc
Q 024338          249 LNPAAGYITGQVLTIDGGMV  268 (269)
Q Consensus       249 ~~~~~~~~~G~~i~~dgg~~  268 (269)
                       ++...+++|++|.+|||+.
T Consensus       245 -~~~~~~~~G~~~~v~gg~~  263 (278)
T 2bgk_A          245 -GDESKYVSGLNLVIDGGYT  263 (278)
T ss_dssp             -SGGGTTCCSCEEEESTTGG
T ss_pred             -CcccccCCCCEEEECCccc
Confidence             4456789999999999974

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=100.00  E-value=3.8e-43  Score=292.17  Aligned_cols=238  Identities=26%  Similarity=0.426  Sum_probs=207.6

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      ++++++|++|||||++|||++++++|+++|++|++ ..|+.+.++++.+++    ....++.+|++|.++++++++    
T Consensus         2 ~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~-~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~----   72 (244)
T 3d3w_A            2 ELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVA-VSRTQADLDSLVREC----PGIEPVCVDLGDWEATERALG----   72 (244)
T ss_dssp             CCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHS----TTCEEEECCTTCHHHHHHHHT----
T ss_pred             ccccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHc----CCCCEEEEeCCCHHHHHHHHH----
Confidence            46789999999999999999999999999999888 478887776665543    235567999999999988876    


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCeEEEEcCCccccCCCCChhhHHh
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK-KGRIINIASVVGLVGNIGQANYSAA  179 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~~~Y~~s  179 (269)
                      .++++|+||||||.....++.+.+.+++++.+++|+.+++.++++++|.|.+++ .++||++||..+..+.++...|++|
T Consensus        73 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  152 (244)
T 3d3w_A           73 SVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCST  152 (244)
T ss_dssp             TCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             HcCCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCCCCchHHHH
Confidence            567899999999988777788899999999999999999999999999998766 7999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc--ChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCcc
Q 024338          180 KAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL--GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYIT  257 (269)
Q Consensus       180 K~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~  257 (269)
                      |++++.++++++.|+++.||++++|+||+++|++....  .+...+......|.+++.+|+|+|++++++++ +.+.+++
T Consensus       153 K~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~-~~~~~~~  231 (244)
T 3d3w_A          153 KGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLS-DRSGMTT  231 (244)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHHHHHHTCTTCSCBCHHHHHHHHHHHHS-GGGTTCC
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHHHHHHHhhCCCCCCcCHHHHHHHHHHHcC-ccccCCC
Confidence            99999999999999999999999999999999986532  22333455566788889999999999999994 4566899


Q ss_pred             ccEEEecCCcc
Q 024338          258 GQVLTIDGGMV  268 (269)
Q Consensus       258 G~~i~~dgg~~  268 (269)
                      |++|.+|||+.
T Consensus       232 G~~~~v~gG~~  242 (244)
T 3d3w_A          232 GSTLPVEGGFW  242 (244)
T ss_dssp             SCEEEESTTGG
T ss_pred             CCEEEECCCcc
Confidence            99999999985

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=100.00  E-value=6.3e-44  Score=299.92  Aligned_cols=241  Identities=28%  Similarity=0.399  Sum_probs=199.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh-
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA-  101 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~-  101 (269)
                      ++++|++|||||++|||++++++|+++|++|++ .+|+.+.++++.++++..+.++.++.+|++|.++++++++++.+. 
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (260)
T 2qq5_A            2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYI-TGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQ   80 (260)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence            467999999999999999999999999999888 578888888888888777778999999999999999999999886 


Q ss_pred             cCCccEEEEccCC--C-----CCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCCh
Q 024338          102 WGTVDILINNAGI--T-----RDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQA  174 (269)
Q Consensus       102 ~~~id~li~~ag~--~-----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~  174 (269)
                      ++++|+||||||.  .     ...++.+.+.++|++.+++|+.+++.+++.++|.|.+++.|+||++||..+..+. +..
T Consensus        81 ~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-~~~  159 (260)
T 2qq5_A           81 QGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYM-FNV  159 (260)
T ss_dssp             TTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSCC-SSH
T ss_pred             CCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCCC-CCC
Confidence            8999999999953  2     2456778888999999999999999999999999988788999999999887754 468


Q ss_pred             hhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHH-H--HHHHh--cCCCCCCCCHHHHHHHHHHhcc
Q 024338          175 NYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDL-E--KKILE--KIPLGRYGQPEEVAGLVEFLAL  249 (269)
Q Consensus       175 ~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~-~--~~~~~--~~~~~~~~~~~~~a~~~~~l~~  249 (269)
                      .|++||++++.|+++++.|+++.||+||+|+||+++|++........ .  .....  ..++++..+|+|+|++++||++
T Consensus       160 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~v~~l~s  239 (260)
T 2qq5_A          160 PYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTELSGKCVVALAT  239 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC----------------------CHHHHHHHHHHHHHHHHT
T ss_pred             chHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccccccchhHHHHHHhhhccCCCHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999999999865432110 0  01011  2244445689999999999995


Q ss_pred             CCCCCCccccEEEecC
Q 024338          250 NPAAGYITGQVLTIDG  265 (269)
Q Consensus       250 ~~~~~~~~G~~i~~dg  265 (269)
                      ++...++||++|.+|+
T Consensus       240 ~~~~~~itG~~i~~~~  255 (260)
T 2qq5_A          240 DPNILSLSGKVLPSCD  255 (260)
T ss_dssp             CTTGGGGTTCEEEHHH
T ss_pred             Ccccccccceeechhh
Confidence            5433589999999873

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=1.2e-43  Score=300.00  Aligned_cols=241  Identities=20%  Similarity=0.304  Sum_probs=199.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      .+++ |++|||||++|||++++++|+++|++|++ .+|+.+.++++.+++... .++.++.+|++|.++++++++++.+.
T Consensus        18 ~~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~-~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~   94 (272)
T 2nwq_A           18 SHMS-STLFITGATSGFGEACARRFAEAGWSLVL-TGRREERLQALAGELSAK-TRVLPLTLDVRDRAAMSAAVDNLPEE   94 (272)
T ss_dssp             ---C-CEEEESSTTTSSHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHTTT-SCEEEEECCTTCHHHHHHHHHTCCGG
T ss_pred             CCcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHhhcC-CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4556 99999999999999999999999999988 588888888887777543 57889999999999999999999999


Q ss_pred             cCCccEEEEccCCCCC-CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCC-eEEEEcCCccccCCCCChhhHHh
Q 024338          102 WGTVDILINNAGITRD-TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKG-RIINIASVVGLVGNIGQANYSAA  179 (269)
Q Consensus       102 ~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~-~iv~isS~~~~~~~~~~~~Y~~s  179 (269)
                      ++++|+||||||+... .++.+.+.++|++.+++|+.+++.+++.++|.|++++.| +||++||..+..+.++...|++|
T Consensus        95 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~~~~~~Y~as  174 (272)
T 2nwq_A           95 FATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGT  174 (272)
T ss_dssp             GSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             hCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCCCCCchHHHH
Confidence            9999999999998764 778899999999999999999999999999999887778 99999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCcccc
Q 024338          180 KAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQ  259 (269)
Q Consensus       180 K~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~  259 (269)
                      |++++.|+++++.|+++.||+||+|+||+++|++.........+............+|+|+|++++||+++  ..+++|+
T Consensus       175 Kaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~~l~s~--~~~~~g~  252 (272)
T 2nwq_A          175 KAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQARYDKTYAGAHPIQPEDIAETIFWIMNQ--PAHLNIN  252 (272)
T ss_dssp             HHHHHHHHHHHHTTCTTSCCEEEEEEECSBC--------------------CCCCBCHHHHHHHHHHHHTS--CTTEEEE
T ss_pred             HHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcccccchHHHHHhhccCCCCCHHHHHHHHHHHhCC--CccCccc
Confidence            99999999999999999999999999999999986432111111111111112245899999999999954  3579999


Q ss_pred             EEEecCCc
Q 024338          260 VLTIDGGM  267 (269)
Q Consensus       260 ~i~~dgg~  267 (269)
                      .|.+|+|.
T Consensus       253 ~i~v~~~~  260 (272)
T 2nwq_A          253 SLEIMPVS  260 (272)
T ss_dssp             EEEEEETT
T ss_pred             eEEEeecc
Confidence            99999884

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=100.00  E-value=3.1e-43  Score=291.31  Aligned_cols=231  Identities=25%  Similarity=0.327  Sum_probs=204.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHH-HcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIE-ASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~-~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      ++|++|||||++|||+++|++|+++|++|++ .+|+.+.++++.+++. ..+.++.++.+|++|.++++++++++.+.++
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   79 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALAL-GARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFG   79 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence            4799999999999999999999999999888 5899988888888876 4577899999999999999999999999999


Q ss_pred             CccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHH
Q 024338          104 TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGV  183 (269)
Q Consensus       104 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al  183 (269)
                      ++|+||||||+....++.+.+.++|++.+++|+.+++.++++++|.| +++.+++|+++|..+..+.++...|++||+++
T Consensus        80 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~~~~~ii~~sS~~~~~~~~~~~~Y~~sKaa~  158 (235)
T 3l77_A           80 DVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSL-KRTGGLALVTTSDVSARLIPYGGGYVSTKWAA  158 (235)
T ss_dssp             SCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHH-HHHTCEEEEECCGGGSSCCTTCHHHHHHHHHH
T ss_pred             CCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHH-hhcCCcEEEEecchhcccCCCcchHHHHHHHH
Confidence            99999999999888889999999999999999999999999999999 44578999999999999999999999999999


Q ss_pred             HHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEEEe
Q 024338          184 IGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTI  263 (269)
Q Consensus       184 ~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~  263 (269)
                      ++|+++++  +...||+|++|+||+++|++.......        .+..++.+|+|+|++++||++ +..++++|+++..
T Consensus       159 ~~~~~~l~--~~~~~i~v~~v~PG~v~T~~~~~~~~~--------~~~~~~~~p~dva~~v~~l~~-~~~~~~~~~~~~~  227 (235)
T 3l77_A          159 RALVRTFQ--IENPDVRFFELRPGAVDTYFGGSKPGK--------PKEKGYLKPDEIAEAVRCLLK-LPKDVRVEELMLR  227 (235)
T ss_dssp             HHHHHHHH--HHCTTSEEEEEEECSBSSSTTTCCSCC--------CGGGTCBCHHHHHHHHHHHHT-SCTTCCCCEEEEC
T ss_pred             HHHHHHHh--hcCCCeEEEEEeCCccccccccccCCc--------ccccCCCCHHHHHHHHHHHHc-CCCCCccceEEEe
Confidence            99999994  446799999999999999987654321        111246689999999999995 5567899999999


Q ss_pred             cCCcc
Q 024338          264 DGGMV  268 (269)
Q Consensus       264 dgg~~  268 (269)
                      |+|+.
T Consensus       228 ~~~~~  232 (235)
T 3l77_A          228 SVYQR  232 (235)
T ss_dssp             CTTSC
T ss_pred             ecccC
Confidence            99863

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=9.1e-43  Score=298.96  Aligned_cols=245  Identities=33%  Similarity=0.549  Sum_probs=214.9

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHH-----cCCcEEEEEccCCCHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEA-----SGGQALTFGGDVSKEADVESMI   95 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~-----~~~~~~~~~~Dls~~~~~~~~~   95 (269)
                      ...+++|++|||||++|||++++++|+++|++|++ .+|+.+.++++.+++..     .+.++.++.+|++|.+++++++
T Consensus        13 ~~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   91 (303)
T 1yxm_A           13 PGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVI-ASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLV   91 (303)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHH
T ss_pred             cCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHH
Confidence            34688999999999999999999999999999888 58888888888888876     3568999999999999999999


Q ss_pred             HHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChh
Q 024338           96 KTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQAN  175 (269)
Q Consensus        96 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~  175 (269)
                      +++.+.++++|+||||||.....++.+.+.+++++.+++|+.+++.++++++|.+.+++.++||++||.. ..+.++...
T Consensus        92 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~~~~~~~~  170 (303)
T 1yxm_A           92 KSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KAGFPLAVH  170 (303)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TTCCTTCHH
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-ccCCCcchh
Confidence            9999999999999999998776778889999999999999999999999999976555678999999998 888889999


Q ss_pred             hHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcc-cccC---hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCC
Q 024338          176 YSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMT-AKLG---EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNP  251 (269)
Q Consensus       176 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~  251 (269)
                      |+++|+++..|+++++.|+.+.||++++|+||+++|++. ....   +..........|.+++.+|+|+|+++++|+ ++
T Consensus       171 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~i~~l~-~~  249 (303)
T 1yxm_A          171 SGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLL-SP  249 (303)
T ss_dssp             HHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHHHHHHHHH-SG
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhcCcccCCCCHHHHHHHHHHHh-Cc
Confidence            999999999999999999999999999999999999952 2111   222233445567788899999999999999 55


Q ss_pred             CCCCccccEEEecCCcc
Q 024338          252 AAGYITGQVLTIDGGMV  268 (269)
Q Consensus       252 ~~~~~~G~~i~~dgg~~  268 (269)
                      ...+++|++|.+|||+.
T Consensus       250 ~~~~~~G~~~~v~gG~~  266 (303)
T 1yxm_A          250 AASFITGQSVDVDGGRS  266 (303)
T ss_dssp             GGTTCCSCEEEESTTGG
T ss_pred             ccccCCCcEEEECCCee
Confidence            66789999999999974

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=3.7e-43  Score=293.48  Aligned_cols=234  Identities=29%  Similarity=0.457  Sum_probs=198.8

Q ss_pred             ccccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHH
Q 024338           18 NEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKT   97 (269)
Q Consensus        18 ~~~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~   97 (269)
                      ......+++|++|||||++|||++++++|+++|++|+++ +|+++..+    ++    .+..++ +|+  .+++++++++
T Consensus        11 ~~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~-~r~~~~~~----~~----~~~~~~-~D~--~~~~~~~~~~   78 (249)
T 1o5i_A           11 HHMELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTIC-ARNEELLK----RS----GHRYVV-CDL--RKDLDLLFEK   78 (249)
T ss_dssp             -----CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEE-ESCHHHHH----HT----CSEEEE-CCT--TTCHHHHHHH
T ss_pred             hhHHhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE-cCCHHHHH----hh----CCeEEE-eeH--HHHHHHHHHH
Confidence            444577899999999999999999999999999998884 77763322    22    256667 999  4566666655


Q ss_pred             HHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhH
Q 024338           98 AVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYS  177 (269)
Q Consensus        98 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~  177 (269)
                      +    .++|+||||||.....++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.++...|+
T Consensus        79 ~----~~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  154 (249)
T 1o5i_A           79 V----KEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSN  154 (249)
T ss_dssp             S----CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHH
T ss_pred             h----cCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCCCCchHH
Confidence            4    389999999998877788899999999999999999999999999999887889999999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHH-HHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCc
Q 024338          178 AAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEK-KILEKIPLGRYGQPEEVAGLVEFLALNPAAGYI  256 (269)
Q Consensus       178 ~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~  256 (269)
                      +||++++.|+++++.|+++.||+|++|+||+++|++.....+...+ ......|.+++.+|+|+|++++||+ ++.++++
T Consensus       155 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~i~~l~-s~~~~~~  233 (249)
T 1o5i_A          155 SARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFLC-SEKASYL  233 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHH-SGGGTTC
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccccchhhHHHHHHhcCCCCCCcCHHHHHHHHHHHc-CccccCC
Confidence            9999999999999999999999999999999999987544333333 4555678888999999999999999 4567799


Q ss_pred             cccEEEecCCcc
Q 024338          257 TGQVLTIDGGMV  268 (269)
Q Consensus       257 ~G~~i~~dgg~~  268 (269)
                      +|++|.+|||+.
T Consensus       234 tG~~~~vdgG~~  245 (249)
T 1o5i_A          234 TGQTIVVDGGLS  245 (249)
T ss_dssp             CSCEEEESTTCC
T ss_pred             CCCEEEECCCcc
Confidence            999999999975

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=100.00  E-value=6.4e-43  Score=291.85  Aligned_cols=234  Identities=24%  Similarity=0.353  Sum_probs=194.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCcc
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVD  106 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id  106 (269)
                      |++|||||++|||+++++.|+++|++|++ .+|+.+.++++.+++   +.++.++.+|++|.++++++++++.+.++++|
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~-~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   76 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIA-TGRRQERLQELKDEL---GDNLYIAQLDVRNRAAIEEMLASLPAEWCNID   76 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHTSCTTTCCCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHh---cCceEEEEcCCCCHHHHHHHHHHHHHhCCCCC
Confidence            68999999999999999999999999888 588888777777666   35788999999999999999999999999999


Q ss_pred             EEEEccCCCC-CCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHHHH
Q 024338          107 ILINNAGITR-DTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIG  185 (269)
Q Consensus       107 ~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~  185 (269)
                      +||||||+.. ..++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|++||++++.
T Consensus        77 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~  156 (248)
T 3asu_A           77 ILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQ  156 (248)
T ss_dssp             EEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred             EEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCCCCCchHHHHHHHHHH
Confidence            9999999863 567888999999999999999999999999999988788999999999999999999999999999999


Q ss_pred             HHHHHHHHhccCCeEEEEEecCCcc-CCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEEEec
Q 024338          186 LTKTVAKEYASRNINVNAIAPGFIA-SDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTID  264 (269)
Q Consensus       186 ~~~~la~e~~~~gi~v~~v~pG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~d  264 (269)
                      |+++++.|+++.||+||+|+||+++ |++.........+............+|+|+|++++||+++  .++++|+.+.++
T Consensus       157 ~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~l~s~--~~~~~g~~i~v~  234 (248)
T 3asu_A          157 FSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWWVSTL--PAHVNINTLEMM  234 (248)
T ss_dssp             HHHHHHHHTTTSCCEEEEEEECSBCC----------------------CCBCHHHHHHHHHHHHHS--CTTCCCCEEEEC
T ss_pred             HHHHHHHHhhhcCcEEEEEeccccccCcchhhcccCchHHHHHHHhccCCCCHHHHHHHHHHHhcC--CccceeeEEEEc
Confidence            9999999999999999999999999 9975421110000111111111235899999999999964  357999999998


Q ss_pred             CC
Q 024338          265 GG  266 (269)
Q Consensus       265 gg  266 (269)
                      ++
T Consensus       235 ~~  236 (248)
T 3asu_A          235 PV  236 (248)
T ss_dssp             CT
T ss_pred             cc
Confidence            76

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=100.00  E-value=2.1e-43  Score=290.25  Aligned_cols=217  Identities=27%  Similarity=0.385  Sum_probs=191.8

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      |+++++|++|||||++|||+++|++|+++|++|+++ +|+.+                    +|++|+++++++++++  
T Consensus         1 M~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~-~r~~~--------------------~D~~~~~~v~~~~~~~--   57 (223)
T 3uce_A            1 MMGSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVA-SRQTG--------------------LDISDEKSVYHYFETI--   57 (223)
T ss_dssp             ----CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEE-SGGGT--------------------CCTTCHHHHHHHHHHH--
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEe-cCCcc--------------------cCCCCHHHHHHHHHHh--
Confidence            356889999999999999999999999999999884 66543                    8999999999988764  


Q ss_pred             hcCCccEEEEccCCC-CCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHh
Q 024338          101 AWGTVDILINNAGIT-RDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAA  179 (269)
Q Consensus       101 ~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  179 (269)
                        +++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|++  .|+||++||..+..+.++...|++|
T Consensus        58 --g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~~sS~~~~~~~~~~~~Y~as  133 (223)
T 3uce_A           58 --GAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQ--GGSITLTSGMLSRKVVANTYVKAAI  133 (223)
T ss_dssp             --CSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEE--EEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             --CCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccC--CeEEEEecchhhccCCCCchHHHHH
Confidence              8999999999987 5578889999999999999999999999999999844  5899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHH----HHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCC
Q 024338          180 KAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDL----EKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGY  255 (269)
Q Consensus       180 K~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~  255 (269)
                      |++++.|+++++.|+++  |+||+|+||+++|++.....+..    .+......|.+++.+|+|+|+++++|+++   .+
T Consensus       134 K~a~~~~~~~la~e~~~--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~---~~  208 (223)
T 3uce_A          134 NAAIEATTKVLAKELAP--IRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPVGKVGEASDIAMAYLFAIQN---SY  208 (223)
T ss_dssp             HHHHHHHHHHHHHHHTT--SEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHHC---TT
T ss_pred             HHHHHHHHHHHHHhhcC--cEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCCCCCccCHHHHHHHHHHHccC---CC
Confidence            99999999999999987  99999999999999887665432    34456678999999999999999999953   58


Q ss_pred             ccccEEEecCCccC
Q 024338          256 ITGQVLTIDGGMVM  269 (269)
Q Consensus       256 ~~G~~i~~dgg~~~  269 (269)
                      ++||+|.+|||+.+
T Consensus       209 ~tG~~i~vdgG~~~  222 (223)
T 3uce_A          209 MTGTVIDVDGGALL  222 (223)
T ss_dssp             CCSCEEEESTTGGG
T ss_pred             CCCcEEEecCCeec
Confidence            99999999999864

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=100.00  E-value=3.5e-42  Score=286.29  Aligned_cols=238  Identities=28%  Similarity=0.440  Sum_probs=207.2

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      +.++++|++|||||++|||++++++|+++|++|++ .+|+.+..+++.+++    ....++.+|++|.++++++++    
T Consensus         2 ~~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~-~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~----   72 (244)
T 1cyd_A            2 KLNFSGLRALVTGAGKGIGRDTVKALHASGAKVVA-VTRTNSDLVSLAKEC----PGIEPVCVDLGDWDATEKALG----   72 (244)
T ss_dssp             -CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHS----TTCEEEECCTTCHHHHHHHHT----
T ss_pred             ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHhc----cCCCcEEecCCCHHHHHHHHH----
Confidence            35688999999999999999999999999999888 478877766655443    245667999999999988876    


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCeEEEEcCCccccCCCCChhhHHh
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK-KGRIINIASVVGLVGNIGQANYSAA  179 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~~~Y~~s  179 (269)
                      .++++|+||||||.....++.+.+.+++++.+++|+.+++.++++++|.|.+++ .++||++||..+..+.++...|++|
T Consensus        73 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  152 (244)
T 1cyd_A           73 GIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSST  152 (244)
T ss_dssp             TCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             HcCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCCCcchhHHH
Confidence            567899999999988777788899999999999999999999999999998766 7899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc--ChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCcc
Q 024338          180 KAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL--GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYIT  257 (269)
Q Consensus       180 K~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~  257 (269)
                      |++++.++++++.|+++.||++++++||+++|++....  .+..........|.+++.+|+|+|+++++++ ++++.+++
T Consensus       153 K~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~-~~~~~~~~  231 (244)
T 1cyd_A          153 KGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLL-SDRSASTS  231 (244)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHH-SGGGTTCC
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccCHHHHHHHHhcCCccCCCCHHHHHHHHHHHh-Cchhhccc
Confidence            99999999999999999999999999999999976432  2334455566678888999999999999999 45667899


Q ss_pred             ccEEEecCCcc
Q 024338          258 GQVLTIDGGMV  268 (269)
Q Consensus       258 G~~i~~dgg~~  268 (269)
                      |+++.+|||+.
T Consensus       232 G~~~~v~gG~~  242 (244)
T 1cyd_A          232 GGGILVDAGYL  242 (244)
T ss_dssp             SSEEEESTTGG
T ss_pred             CCEEEECCCcc
Confidence            99999999985

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=100.00  E-value=6.4e-42  Score=284.77  Aligned_cols=232  Identities=26%  Similarity=0.391  Sum_probs=209.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCC-------cEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHH
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGC-------KVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTA   98 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~-------~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~   98 (269)
                      +|++|||||++|||++++++|+++|+       +|++ ..|+.+.++++.+++...+.++.++.+|++|.++++++++++
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   80 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVL-SSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHI   80 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEE-EESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEE-EeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHH
Confidence            68999999999999999999999999       7777 588888888888888766778999999999999999999999


Q ss_pred             HHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHH
Q 024338           99 VDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSA  178 (269)
Q Consensus        99 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~  178 (269)
                      .+.++++|+||||||.....++.+.+.+++++.+++|+.+++.+++.++|.|.+++.++||++||..+..+.++...|++
T Consensus        81 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  160 (244)
T 2bd0_A           81 VERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCM  160 (244)
T ss_dssp             HHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             HHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCCCCCchhHH
Confidence            99999999999999988777888899999999999999999999999999998878899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccc
Q 024338          179 AKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITG  258 (269)
Q Consensus       179 sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G  258 (269)
                      ||++++.|+++++.|+++.||++++|+||+++|++........         ..++.+|+|+|+.++++++ +...+++|
T Consensus       161 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~-~~~~~~~g  230 (244)
T 2bd0_A          161 SKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDEM---------QALMMMPEDIAAPVVQAYL-QPSRTVVE  230 (244)
T ss_dssp             HHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCSTT---------GGGSBCHHHHHHHHHHHHT-SCTTEEEE
T ss_pred             HHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhccccc---------cccCCCHHHHHHHHHHHHh-CCccccch
Confidence            9999999999999999999999999999999999876532210         1145689999999999994 56778999


Q ss_pred             cEEEecCCcc
Q 024338          259 QVLTIDGGMV  268 (269)
Q Consensus       259 ~~i~~dgg~~  268 (269)
                      +++..|+|..
T Consensus       231 ~~~~~~~~~~  240 (244)
T 2bd0_A          231 EIILRPTSGD  240 (244)
T ss_dssp             EEEEEETTCC
T ss_pred             heEEeccccc
Confidence            9999999865

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=100.00  E-value=1.7e-43  Score=305.84  Aligned_cols=245  Identities=22%  Similarity=0.287  Sum_probs=165.9

Q ss_pred             cCCCCCCEEEEeCC--CCchHHHHHHHHHHcCCcEEEEecCCH-----------HHHH-----------HHHHHHHHcCC
Q 024338           21 AQNVEAPVAVVTGA--SRGIGRAVATSLGKAGCKVLVNYARSS-----------KEAE-----------EVCKEIEASGG   76 (269)
Q Consensus        21 ~~~~~~k~vlItGa--s~giG~~~a~~l~~~G~~v~i~~~r~~-----------~~~~-----------~~~~~l~~~~~   76 (269)
                      .+++++|++|||||  ++|||+++|+.|+++|++|+++ +|++           +.++           ++.+++.+.+.
T Consensus         4 ~~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (319)
T 2ptg_A            4 PVDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVG-TWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPV   82 (319)
T ss_dssp             CCCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHC------------------------------
T ss_pred             ccccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEE-eccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccc
Confidence            35688999999999  8999999999999999999885 4432           2221           22333332221


Q ss_pred             c---EEEEEcc------------CCC--------HHHHHHHHHHHHHhcCCccEEEEccCCCC--CCcccCCCHHHHHHH
Q 024338           77 Q---ALTFGGD------------VSK--------EADVESMIKTAVDAWGTVDILINNAGITR--DTLLMRMKKSQWQDV  131 (269)
Q Consensus        77 ~---~~~~~~D------------ls~--------~~~~~~~~~~~~~~~~~id~li~~ag~~~--~~~~~~~~~~~~~~~  131 (269)
                      .   ...+.+|            ++|        .++++++++++.++++++|+||||||+..  ..++.+.+.++|++.
T Consensus        83 ~~~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~  162 (319)
T 2ptg_A           83 DLVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAA  162 (319)
T ss_dssp             --CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHH
T ss_pred             cccccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHH
Confidence            1   2333333            333        45899999999999999999999999763  467888999999999


Q ss_pred             HHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCC-hhhHHhHHHHHHHHHHHHHHhcc-CCeEEEEEecCCc
Q 024338          132 IDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQ-ANYSAAKAGVIGLTKTVAKEYAS-RNINVNAIAPGFI  209 (269)
Q Consensus       132 ~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~-~~Y~~sK~al~~~~~~la~e~~~-~gi~v~~v~pG~v  209 (269)
                      +++|+.+++.++++++|.|.+  .|+||++||..+..+.++. ..|++||+++++|+++++.|+++ +||+||+|+||++
T Consensus       163 ~~vN~~g~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v  240 (319)
T 2ptg_A          163 VSSSSYSFVSLLQHFLPLMKE--GGSALALSYIASEKVIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPL  240 (319)
T ss_dssp             HHHHTHHHHHHHHHHGGGEEE--EEEEEEEEECC------------------THHHHHHHHHHHHHHHCCEEEEEEECCC
T ss_pred             HhHhhHHHHHHHHHHHHHHhc--CceEEEEeccccccccCccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCc
Confidence            999999999999999999954  4899999999999998887 69999999999999999999985 8999999999999


Q ss_pred             cCCcccccCh----HH----HHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEEEecCCccC
Q 024338          210 ASDMTAKLGE----DL----EKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       210 ~t~~~~~~~~----~~----~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg~~~  269 (269)
                      +|++......    ..    .+......|++++.+|+|+|++++||+ ++.++++||++|.+|||+.+
T Consensus       241 ~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~-s~~~~~itG~~i~vdGG~~~  307 (319)
T 2ptg_A          241 KSRAASAIGKAGDKTFIDLAIDYSEANAPLQKELESDDVGRAALFLL-SPLARAVTGATLYVDNGLHA  307 (319)
T ss_dssp             C-------------------------------CCCHHHHHHHHHHHT-SGGGTTCCSCEEEESTTCTT
T ss_pred             cChhhhhcccccchhhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHh-CcccCCccCCEEEECCCcee
Confidence            9998654321    01    111234467888899999999999999 56778999999999999853

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=100.00  E-value=5e-42  Score=294.28  Aligned_cols=230  Identities=27%  Similarity=0.370  Sum_probs=200.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      .+++||++|||||++|||+++|++|+++|++|++ .+|+.+.++++.++++..+.++.++.+|++|.++++++++++.+.
T Consensus        27 ~~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  105 (301)
T 3tjr_A           27 SGFDGRAAVVTGGASGIGLATATEFARRGARLVL-SDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRL  105 (301)
T ss_dssp             CCSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             hccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            3589999999999999999999999999999888 589999999999999888889999999999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCeEEEEcCCccccCCCCChhhHHhH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK-KGRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                      ++++|+||||||+....++.+.+.+++++.+++|+.+++.++++++|.|.+++ .++||++||..+..+.++...|++||
T Consensus       106 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  185 (301)
T 3tjr_A          106 LGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAK  185 (301)
T ss_dssp             HSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             CCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCchHHHHHH
Confidence            99999999999998888899999999999999999999999999999998766 78999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHH----------HHHHHhcCCCCCCCCHHHHHHHHHHhccC
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDL----------EKKILEKIPLGRYGQPEEVAGLVEFLALN  250 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~a~~~~~l~~~  250 (269)
                      ++++.|+++++.|+++.||+|++|+||+++|++........          ...+..........+|+|+|+.++.++..
T Consensus       186 aa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~i~~~l~~  265 (301)
T 3tjr_A          186 YGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDVARLTADAILA  265 (301)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC----------------------CCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcccCcEEEEEECCccccccccccccccchhhccccChhhhccccccccCCCCHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999865321100          00011111223456999999999999865


Q ss_pred             CC
Q 024338          251 PA  252 (269)
Q Consensus       251 ~~  252 (269)
                      +.
T Consensus       266 ~~  267 (301)
T 3tjr_A          266 NR  267 (301)
T ss_dssp             TC
T ss_pred             CC
Confidence            43

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=100.00  E-value=8.4e-43  Score=300.96  Aligned_cols=244  Identities=22%  Similarity=0.281  Sum_probs=196.6

Q ss_pred             cCCCCCCEEEEeCC--CCchHHHHHHHHHHcCCcEEEEecCCHH------HHH-HHHHHHHHc--CCc---EEEEEcc--
Q 024338           21 AQNVEAPVAVVTGA--SRGIGRAVATSLGKAGCKVLVNYARSSK------EAE-EVCKEIEAS--GGQ---ALTFGGD--   84 (269)
Q Consensus        21 ~~~~~~k~vlItGa--s~giG~~~a~~l~~~G~~v~i~~~r~~~------~~~-~~~~~l~~~--~~~---~~~~~~D--   84 (269)
                      .+++++|++|||||  ++|||+++|+.|+++|++|+++ +|++.      ... ...+++.+.  +..   ..++.+|  
T Consensus         4 ~~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~   82 (315)
T 2o2s_A            4 PIDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALG-TWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAA   82 (315)
T ss_dssp             CCCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEE-ECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTT
T ss_pred             cccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEE-ecccccchhhhhhhhhhhhhhhhhhcccccccccccccccc
Confidence            45689999999999  8999999999999999998884 55431      000 011112111  110   1333333  


Q ss_pred             ----------CC--------CHHHHHHHHHHHHHhcCCccEEEEccCCCC--CCcccCCCHHHHHHHHHHHhHHHHHHHH
Q 024338           85 ----------VS--------KEADVESMIKTAVDAWGTVDILINNAGITR--DTLLMRMKKSQWQDVIDLNLTGVFLCTQ  144 (269)
Q Consensus        85 ----------ls--------~~~~~~~~~~~~~~~~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~  144 (269)
                                ++        |.++++++++++.++++++|+||||||+..  ..++.+.+.++|++.+++|+.+++.+++
T Consensus        83 ~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  162 (315)
T 2o2s_A           83 FDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQ  162 (315)
T ss_dssp             CSSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             ccccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHH
Confidence                      33        256899999999999999999999999763  4678889999999999999999999999


Q ss_pred             HHHHHHHhCCCCeEEEEcCCccccCCCCC-hhhHHhHHHHHHHHHHHHHHhcc-CCeEEEEEecCCccCCcccccC----
Q 024338          145 AAAKIMMKKKKGRIINIASVVGLVGNIGQ-ANYSAAKAGVIGLTKTVAKEYAS-RNINVNAIAPGFIASDMTAKLG----  218 (269)
Q Consensus       145 ~~~~~l~~~~~~~iv~isS~~~~~~~~~~-~~Y~~sK~al~~~~~~la~e~~~-~gi~v~~v~pG~v~t~~~~~~~----  218 (269)
                      +++|.|++  .|+||++||..+..+.++. ..|++||+++++|+++++.|+++ .||+||+|+||+++|++.....    
T Consensus       163 ~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~~  240 (315)
T 2o2s_A          163 HFGPIMNE--GGSAVTLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSGE  240 (315)
T ss_dssp             HHSTTEEE--EEEEEEEEEGGGTSCCTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTTCSSS
T ss_pred             HHHHHHhc--CCEEEEEecccccccCCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhcccccc
Confidence            99999954  4899999999999998887 59999999999999999999985 8999999999999999764332    


Q ss_pred             ----hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEEEecCCcc
Q 024338          219 ----EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMV  268 (269)
Q Consensus       219 ----~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg~~  268 (269)
                          +...+......|++++.+|+|+|++++||+ ++.++++||++|.+|||+.
T Consensus       241 ~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~-s~~~~~itG~~i~vdGG~~  293 (315)
T 2o2s_A          241 KSFIDYAIDYSYNNAPLRRDLHSDDVGGAALFLL-SPLARAVSGVTLYVDNGLH  293 (315)
T ss_dssp             SCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHT-SGGGTTCCSCEEEESTTGG
T ss_pred             chhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHh-CchhccCcCCEEEECCCee
Confidence                112223345678899999999999999999 5678899999999999975

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=2.6e-42  Score=320.54  Aligned_cols=231  Identities=40%  Similarity=0.586  Sum_probs=201.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCH---------HHHHHHHHHHHHcCCcEEEEEccCCCHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSS---------KEAEEVCKEIEASGGQALTFGGDVSKEADVE   92 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~---------~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~   92 (269)
                      +++++|+++||||++|||+++|+.|+++|++|++. +++.         +.++++.+++...+.+.   .+|++|.++++
T Consensus         4 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~-~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~---~~d~~d~~~~~   79 (604)
T 2et6_A            4 VDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVN-DLGGALNGQGGNSKAADVVVDEIVKNGGVA---VADYNNVLDGD   79 (604)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEE-CC-----------CHHHHHHHHHHHTTCEE---EEECCCTTCHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEE-eCCccccccccchHHHHHHHHHHHhcCCeE---EEEcCCHHHHH
Confidence            56889999999999999999999999999999885 5443         56677778887665543   36888888899


Q ss_pred             HHHHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCC
Q 024338           93 SMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIG  172 (269)
Q Consensus        93 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~  172 (269)
                      ++++++.+++|+||+||||||+....++.+.+.++|++.+++|+.+++.++|+++|+|++++.|+||++||..+..+.++
T Consensus        80 ~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~~~  159 (604)
T 2et6_A           80 KIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFG  159 (604)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCC
Confidence            99999999999999999999998778889999999999999999999999999999998888899999999999999999


Q ss_pred             ChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCC
Q 024338          173 QANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPA  252 (269)
Q Consensus       173 ~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~  252 (269)
                      ...|++||+|+.+|+++|+.|+++.||+||+|+|| +.|++.....+.   ...      ...+|+++|+.++||++ ++
T Consensus       160 ~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T~m~~~~~~~---~~~------~~~~pe~vA~~v~~L~s-~~  228 (604)
T 2et6_A          160 QANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARSRMTESIMPP---PML------EKLGPEKVAPLVLYLSS-AE  228 (604)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCCHHHHTTSCH---HHH------TTCSHHHHHHHHHHHTS-SS
T ss_pred             chHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcCccccccCCh---hhh------ccCCHHHHHHHHHHHhC-Cc
Confidence            99999999999999999999999999999999998 688875432211   111      12489999999999995 45


Q ss_pred             CCCccccEEEecCCcc
Q 024338          253 AGYITGQVLTIDGGMV  268 (269)
Q Consensus       253 ~~~~~G~~i~~dgg~~  268 (269)
                       .++||++|.+|||+.
T Consensus       229 -~~itG~~~~vdgG~~  243 (604)
T 2et6_A          229 -NELTGQFFEVAAGFY  243 (604)
T ss_dssp             -CCCCSCEEEEETTEE
T ss_pred             -ccCCCCEEEECCCeE
Confidence             799999999999974

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=100.00  E-value=2.3e-42  Score=285.24  Aligned_cols=224  Identities=21%  Similarity=0.281  Sum_probs=188.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCcc
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVD  106 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id  106 (269)
                      |++|||||++|||++++++|+++|++|++ .+|+.+.++++.+++   +.++.++.+|++|.++++++++++.+.   .|
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~-~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~---~d   74 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYL-TGRSESKLSTVTNCL---SNNVGYRARDLASHQEVEQLFEQLDSI---PS   74 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEE-EESCHHHHHHHHHTC---SSCCCEEECCTTCHHHHHHHHHSCSSC---CS
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHH---hhccCeEeecCCCHHHHHHHHHHHhhc---CC
Confidence            78999999999999999999999999888 588888877766655   567888999999999999999876543   49


Q ss_pred             EEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHHHHH
Q 024338          107 ILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGL  186 (269)
Q Consensus       107 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~~  186 (269)
                      +||||||.....++.+.+.++|++.+++|+.+++.+++.++|.|.+++. +||++||..+..+.++...|++||++++.|
T Consensus        75 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-~iv~isS~~~~~~~~~~~~Y~asKaa~~~~  153 (230)
T 3guy_A           75 TVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPV-NVVMIMSTAAQQPKAQESTYCAVKWAVKGL  153 (230)
T ss_dssp             EEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCC-EEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred             EEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-eEEEEeecccCCCCCCCchhHHHHHHHHHH
Confidence            9999999988888999999999999999999999999999999976554 999999999999999999999999999999


Q ss_pred             HHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEEEecCC
Q 024338          187 TKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGG  266 (269)
Q Consensus       187 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg  266 (269)
                      +++++.|+++.||+|++|+||+++|++......        ..+.+++.+|+|+|+.++++++++.+++++|+.+..|..
T Consensus       154 ~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--------~~~~~~~~~~~dvA~~i~~l~~~~~~~~itg~~~~~~~~  225 (230)
T 3guy_A          154 IESVRLELKGKPMKIIAVYPGGMATEFWETSGK--------SLDTSSFMSAEDAALMIHGALANIGNGYVSDITVNREGH  225 (230)
T ss_dssp             HHHHHHHTTTSSCEEEEEEECCC------------------------CCCHHHHHHHHHHHCCEETTEEEEEEEEEC---
T ss_pred             HHHHHHHHHhcCeEEEEEECCcccChHHHhcCC--------CCCcccCCCHHHHHHHHHHHHhCcCCCCccceeecCCCC
Confidence            999999999999999999999999998765432        234567789999999999999878899999999988754

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=100.00  E-value=1.1e-42  Score=297.81  Aligned_cols=243  Identities=22%  Similarity=0.306  Sum_probs=197.4

Q ss_pred             cCCCCCCEEEEeCCC--CchHHHHHHHHHHcCCcEEEEecCCHHHH-----------HHHHHHHHHcC--CcEEEEEcc-
Q 024338           21 AQNVEAPVAVVTGAS--RGIGRAVATSLGKAGCKVLVNYARSSKEA-----------EEVCKEIEASG--GQALTFGGD-   84 (269)
Q Consensus        21 ~~~~~~k~vlItGas--~giG~~~a~~l~~~G~~v~i~~~r~~~~~-----------~~~~~~l~~~~--~~~~~~~~D-   84 (269)
                      .+++++|++|||||+  +|||+++|++|+++|++|+++ +|++...           +++ +++....  .....+.+| 
T Consensus         3 ~~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~   80 (297)
T 1d7o_A            3 PIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVG-TWVPALNIFETSLRRGKFDQS-RVLPDGSLMEIKKVYPLDA   80 (297)
T ss_dssp             CCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEE-EEHHHHHHHHHHHHTTTTTGG-GBCTTSSBCCEEEEEEECT
T ss_pred             ccccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEe-eccccchhhhhhhhhhHhhhh-hhhccccccccccccccce
Confidence            467899999999999  999999999999999998885 5442111           111 1111100  012333333 


Q ss_pred             -------CC----C--------HHHHHHHHHHHHHhcCCccEEEEccCCCC--CCcccCCCHHHHHHHHHHHhHHHHHHH
Q 024338           85 -------VS----K--------EADVESMIKTAVDAWGTVDILINNAGITR--DTLLMRMKKSQWQDVIDLNLTGVFLCT  143 (269)
Q Consensus        85 -------ls----~--------~~~~~~~~~~~~~~~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~  143 (269)
                             ++    |        .++++++++++.++++++|+||||||+..  ..++.+.+.++|++.+++|+.+++.++
T Consensus        81 ~~~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~  160 (297)
T 1d7o_A           81 VFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLL  160 (297)
T ss_dssp             TCCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             eccchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHH
Confidence                   33    2        56899999999999999999999999754  467788999999999999999999999


Q ss_pred             HHHHHHHHhCCCCeEEEEcCCccccCCCCC-hhhHHhHHHHHHHHHHHHHHhcc-CCeEEEEEecCCccCCcccccC--h
Q 024338          144 QAAAKIMMKKKKGRIINIASVVGLVGNIGQ-ANYSAAKAGVIGLTKTVAKEYAS-RNINVNAIAPGFIASDMTAKLG--E  219 (269)
Q Consensus       144 ~~~~~~l~~~~~~~iv~isS~~~~~~~~~~-~~Y~~sK~al~~~~~~la~e~~~-~gi~v~~v~pG~v~t~~~~~~~--~  219 (269)
                      ++++|.|++  .|+||++||..+..+.++. ..|++||+++++|+++++.|+++ .||+||+|+||+++|++.....  +
T Consensus       161 ~~~~~~m~~--~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~~~~  238 (297)
T 1d7o_A          161 SHFLPIMNP--GGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFID  238 (297)
T ss_dssp             HHHGGGEEE--EEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHH
T ss_pred             HHHHHHhcc--CceEEEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhccccH
Confidence            999999954  4899999999999998887 69999999999999999999985 7999999999999999876532  2


Q ss_pred             HHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEEEecCCcc
Q 024338          220 DLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMV  268 (269)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg~~  268 (269)
                      ...+......|++++.+|+|+|++++||+ ++.+++++|++|.+|||+.
T Consensus       239 ~~~~~~~~~~p~~r~~~pedvA~~v~~l~-s~~~~~itG~~i~vdgG~~  286 (297)
T 1d7o_A          239 TMIEYSYNNAPIQKTLTADEVGNAAAFLV-SPLASAITGATIYVDNGLN  286 (297)
T ss_dssp             HHHHHHHHHSSSCCCBCHHHHHHHHHHHT-SGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHhhccCCCCCCCCHHHHHHHHHHHh-CccccCCCCCEEEECCCce
Confidence            33344455678888999999999999999 5667899999999999985

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=3.9e-42  Score=319.31  Aligned_cols=230  Identities=40%  Similarity=0.627  Sum_probs=197.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      ++++||+++||||++|||+++|+.|+++|++|++. +++.  .+++.+++.+.+.+...+.+|++  .+.+++++++.++
T Consensus       318 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~-~~~~--~~~~~~~i~~~g~~~~~~~~Dv~--~~~~~~~~~~~~~  392 (604)
T 2et6_A          318 VSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVN-DFKD--ATKTVDEIKAAGGEAWPDQHDVA--KDSEAIIKNVIDK  392 (604)
T ss_dssp             CCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEE-CSSC--CHHHHHHHHHTTCEEEEECCCHH--HHHHHHHHHHHHH
T ss_pred             cccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEE-eCcc--HHHHHHHHHhcCCeEEEEEcChH--HHHHHHHHHHHHh
Confidence            46899999999999999999999999999999885 4422  34556667666677777888884  4567889999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKA  181 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  181 (269)
                      +|+||+||||||+....++.+++.++|++.+++|+.+++.++|+++|+|++++.|+||++||..+..+.+++..|++||+
T Consensus       393 ~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~~~~~Y~asKa  472 (604)
T 2et6_A          393 YGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKA  472 (604)
T ss_dssp             HSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTBHHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCChhHHHHHH
Confidence            99999999999998778899999999999999999999999999999998888899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEE
Q 024338          182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL  261 (269)
Q Consensus       182 al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i  261 (269)
                      ++.+|+++|+.|+++.||+||+|+||. +|++.....+.   .      .....+|+++|++++||+ +++++ +||++|
T Consensus       473 al~~lt~~la~El~~~gIrVn~v~PG~-~T~m~~~~~~~---~------~~~~~~pe~vA~~v~~L~-s~~~~-itG~~~  540 (604)
T 2et6_A          473 GILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTLSIMRE---Q------DKNLYHADQVAPLLVYLG-TDDVP-VTGETF  540 (604)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC------------------CCSSCGGGTHHHHHHTT-STTCC-CCSCEE
T ss_pred             HHHHHHHHHHHHhCccCeEEEEEcCCC-CCccccccCch---h------hccCCCHHHHHHHHHHHh-CCccC-CCCcEE
Confidence            999999999999999999999999995 99986532111   0      122348999999999999 55666 999999


Q ss_pred             EecCCcc
Q 024338          262 TIDGGMV  268 (269)
Q Consensus       262 ~~dgg~~  268 (269)
                      .+|||+.
T Consensus       541 ~vdGG~~  547 (604)
T 2et6_A          541 EIGGGWI  547 (604)
T ss_dssp             EEETTEE
T ss_pred             EECCCee
Confidence            9999974

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=100.00  E-value=1.5e-41  Score=293.26  Aligned_cols=232  Identities=38%  Similarity=0.555  Sum_probs=203.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEe--------cCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNY--------ARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVES   93 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~--------~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~   93 (269)
                      +++++|++|||||++|||+++++.|+++|++|+++.        .|+.+..+++.+++...+..   ..+|++|.+++++
T Consensus         5 ~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~---~~~D~~~~~~~~~   81 (319)
T 1gz6_A            5 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGK---AVANYDSVEAGEK   81 (319)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCE---EEEECCCGGGHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCe---EEEeCCCHHHHHH
Confidence            578999999999999999999999999999998852        45777788888888765543   3589999999999


Q ss_pred             HHHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCC
Q 024338           94 MIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQ  173 (269)
Q Consensus        94 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~  173 (269)
                      +++++.+.++++|+||||||+....++.+.+.++|+..+++|+.+++.++++++|.|++++.++||++||..+..+.++.
T Consensus        82 ~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~~~~  161 (319)
T 1gz6_A           82 LVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQ  161 (319)
T ss_dssp             HHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTC
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCC
Confidence            99999999999999999999887777888999999999999999999999999999988788999999999999999999


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCC
Q 024338          174 ANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAA  253 (269)
Q Consensus       174 ~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~  253 (269)
                      ..|++||++++.|+++++.|+++.||+||+|+||++ |++.....+..   ...      ..+|+++|++++||+++  .
T Consensus       162 ~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~~~~~~---~~~------~~~p~dvA~~~~~l~s~--~  229 (319)
T 1gz6_A          162 ANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTETVMPED---LVE------ALKPEYVAPLVLWLCHE--S  229 (319)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGGGSCHH---HHH------HSCGGGTHHHHHHHTST--T
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccccccCChh---hhc------cCCHHHHHHHHHHHhCc--h
Confidence            999999999999999999999999999999999998 88755432211   111      23799999999999954  3


Q ss_pred             CCccccEEEecCCcc
Q 024338          254 GYITGQVLTIDGGMV  268 (269)
Q Consensus       254 ~~~~G~~i~~dgg~~  268 (269)
                      .+++|++|.+|||+.
T Consensus       230 ~~~tG~~~~v~GG~~  244 (319)
T 1gz6_A          230 CEENGGLFEVGAGWI  244 (319)
T ss_dssp             CCCCSCEEEEETTEE
T ss_pred             hhcCCCEEEECCCeE
Confidence            478999999999974

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=100.00  E-value=6.3e-41  Score=289.61  Aligned_cols=231  Identities=22%  Similarity=0.319  Sum_probs=194.3

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCC--cEEEEEccCCCHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGG--QALTFGGDVSKEADVESMIKTA   98 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dls~~~~~~~~~~~~   98 (269)
                      ++++++|++|||||++|||++++++|+++|++|++ ++|+.+.++++.+++...+.  ++.++.+|++|.++++++++++
T Consensus         3 m~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~-~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   81 (319)
T 3ioy_A            3 LKDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAI-ADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEV   81 (319)
T ss_dssp             CCCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence            46789999999999999999999999999999888 58999999888888877655  8999999999999999999999


Q ss_pred             HHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC------CCCeEEEEcCCccccCCCC
Q 024338           99 VDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKK------KKGRIINIASVVGLVGNIG  172 (269)
Q Consensus        99 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~~~~iv~isS~~~~~~~~~  172 (269)
                      .+.++++|+||||||+....++.+.+.+++++.+++|+.+++.++++++|.|.++      +.|+||++||..+..+.++
T Consensus        82 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~~  161 (319)
T 3ioy_A           82 EARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGS  161 (319)
T ss_dssp             HHHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCSS
T ss_pred             HHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCCC
Confidence            9999999999999999888889999999999999999999999999999999764      5799999999999999999


Q ss_pred             ChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChH--HHH--------HHHhcC-CC-CCCCCHHHH
Q 024338          173 QANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGED--LEK--------KILEKI-PL-GRYGQPEEV  240 (269)
Q Consensus       173 ~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~--~~~--------~~~~~~-~~-~~~~~~~~~  240 (269)
                      ...|++||+|+++|+++++.|+.+.||+|++|+||+|+|++.......  ...        ...... .. ....+|+++
T Consensus       162 ~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~v  241 (319)
T 3ioy_A          162 PGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGMEPDVI  241 (319)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----------------------------CCGGGSSBCHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHHHHhhhcCCCHHHH
Confidence            999999999999999999999999999999999999999986543211  000        000000 00 011589999


Q ss_pred             HHHHHHhccCCC
Q 024338          241 AGLVEFLALNPA  252 (269)
Q Consensus       241 a~~~~~l~~~~~  252 (269)
                      |+.++.++..++
T Consensus       242 A~~~~~al~~~~  253 (319)
T 3ioy_A          242 GARVIEAMKANR  253 (319)
T ss_dssp             HHHHHHHHHTTC
T ss_pred             HHHHHHHHHcCC
Confidence            999999986544

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=100.00  E-value=1.6e-42  Score=296.03  Aligned_cols=234  Identities=19%  Similarity=0.278  Sum_probs=188.5

Q ss_pred             cccccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHH
Q 024338           17 TNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIK   96 (269)
Q Consensus        17 ~~~~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~   96 (269)
                      +...+++++||++|||||++|||++++++|+++|++|++ .+|+.+..++..+++   +.++.++.+|++|.++++++++
T Consensus         7 ~~~~~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~-~~r~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~v~~~~~   82 (291)
T 3rd5_A            7 TAADLPSFAQRTVVITGANSGLGAVTARELARRGATVIM-AVRDTRKGEAAARTM---AGQVEVRELDLQDLSSVRRFAD   82 (291)
T ss_dssp             CGGGCCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHTTS---SSEEEEEECCTTCHHHHHHHHH
T ss_pred             ChhhccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHh---cCCeeEEEcCCCCHHHHHHHHH
Confidence            344567899999999999999999999999999999888 588888777666554   5689999999999999999888


Q ss_pred             HHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccC-------
Q 024338           97 TAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVG-------  169 (269)
Q Consensus        97 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~-------  169 (269)
                      ++    +++|+||||||+...  ..+.+.+++++.+++|+.+++.++++++|.|.+    +||++||..+..+       
T Consensus        83 ~~----~~iD~lv~nAg~~~~--~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~----riv~isS~~~~~~~~~~~~~  152 (291)
T 3rd5_A           83 GV----SGADVLINNAGIMAV--PYALTVDGFESQIGTNHLGHFALTNLLLPRLTD----RVVTVSSMAHWPGRINLEDL  152 (291)
T ss_dssp             TC----CCEEEEEECCCCCSC--CCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE----EEEEECCGGGTTCCCCSSCT
T ss_pred             hc----CCCCEEEECCcCCCC--cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh----heeEeechhhccCCCCcccc
Confidence            76    789999999998643  355678899999999999999999999998853    8999999988755       


Q ss_pred             ------CCCChhhHHhHHHHHHHHHHHHHHhccCC--eEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCC-CHHHH
Q 024338          170 ------NIGQANYSAAKAGVIGLTKTVAKEYASRN--INVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYG-QPEEV  240 (269)
Q Consensus       170 ------~~~~~~Y~~sK~al~~~~~~la~e~~~~g--i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  240 (269)
                            .++...|++||++++.|+++++.|+++.|  |+|++|+||+++|++.....+....... ..+.++.. +|+|+
T Consensus       153 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  231 (291)
T 3rd5_A          153 NWRSRRYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKLGDALM-SAATRVVATDADFG  231 (291)
T ss_dssp             TCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC---------------------CHHHHHH
T ss_pred             cccccCCCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchHHHHHHH-HHHHHHHhCCHHHH
Confidence                  34567899999999999999999999887  9999999999999998765444333322 23444444 49999


Q ss_pred             HHHHHHhccCCCCCCccccEEEecCCcc
Q 024338          241 AGLVEFLALNPAAGYITGQVLTIDGGMV  268 (269)
Q Consensus       241 a~~~~~l~~~~~~~~~~G~~i~~dgg~~  268 (269)
                      |++++||+++   .+++|++|.+|||+.
T Consensus       232 A~~~~~l~~~---~~~~G~~~~vdgG~~  256 (291)
T 3rd5_A          232 ARQTLYAASQ---DLPGDSFVGPRFGYL  256 (291)
T ss_dssp             HHHHHHHHHS---CCCTTCEEEETTSSS
T ss_pred             HHHHHHHHcC---CCCCCceeCCccccc
Confidence            9999999965   289999999999975

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1e-40  Score=283.09  Aligned_cols=243  Identities=32%  Similarity=0.450  Sum_probs=203.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcC--CcEEEEEccCCCHHHHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASG--GQALTFGGDVSKEADVESMIKTAV   99 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dls~~~~~~~~~~~~~   99 (269)
                      .++++|++|||||++|||+++++.|+++|++|++ ..|+.+.++++.++++..+  .++.++.+|++|.++++++++++.
T Consensus        28 ~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  106 (279)
T 1xg5_A           28 ERWRDRLALVTGASGGIGAAVARALVQQGLKVVG-CARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIR  106 (279)
T ss_dssp             GGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEE-EECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHH
Confidence            4578999999999999999999999999999888 4788888888888887654  568889999999999999999999


Q ss_pred             HhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC--CeEEEEcCCccc--cCCCCChh
Q 024338          100 DAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKK--GRIINIASVVGL--VGNIGQAN  175 (269)
Q Consensus       100 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~--~~iv~isS~~~~--~~~~~~~~  175 (269)
                      +.++++|+||||||.....++.+.+.++|++.+++|+.+++.+++.++|.|++++.  ++||++||..+.  .+.++...
T Consensus       107 ~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  186 (279)
T 1xg5_A          107 SQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHF  186 (279)
T ss_dssp             HHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHH
T ss_pred             HhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCCCCCCch
Confidence            99999999999999887777888999999999999999999999999999987663  899999999988  57778889


Q ss_pred             hHHhHHHHHHHHHHHHHHhc--cCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCC
Q 024338          176 YSAAKAGVIGLTKTVAKEYA--SRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAA  253 (269)
Q Consensus       176 Y~~sK~al~~~~~~la~e~~--~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~  253 (269)
                      |++||++++.|+++++.|++  +.||++++|+||+++|++.........+......+..++.+|+|+|++++++++. ..
T Consensus       187 Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~i~~l~~~-~~  265 (279)
T 1xg5_A          187 YSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCLKPEDVAEAVIYVLST-PA  265 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHHHC---CBCHHHHHHHHHHHHHS-CT
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccChhHHhhhcccccCCCHHHHHHHHHHHhcC-Cc
Confidence            99999999999999999998  8899999999999999984321111111122222344567999999999999965 45


Q ss_pred             CCccccEEEecCC
Q 024338          254 GYITGQVLTIDGG  266 (269)
Q Consensus       254 ~~~~G~~i~~dgg  266 (269)
                      .+.+|++..-++|
T Consensus       266 ~~~~g~i~i~~~~  278 (279)
T 1xg5_A          266 HIQIGDIQMRPTG  278 (279)
T ss_dssp             TEEEEEEEEEETT
T ss_pred             ceEeeeEEEccCC
Confidence            5677766554444

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=100.00  E-value=5.5e-41  Score=285.00  Aligned_cols=235  Identities=26%  Similarity=0.347  Sum_probs=198.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      |++.+|++|||||++|||+++|++|+++|++|++ ..|+.+.++++.+++   +.++.++.+|++|.++++++++++.+.
T Consensus         1 M~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~-~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~   76 (281)
T 3m1a_A            1 MSESAKVWLVTGASSGFGRAIAEAAVAAGDTVIG-TARRTEALDDLVAAY---PDRAEAISLDVTDGERIDVVAADVLAR   76 (281)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEE-EESSGGGGHHHHHHC---TTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHhc---cCCceEEEeeCCCHHHHHHHHHHHHHh
Confidence            3467899999999999999999999999999988 478877666655443   568999999999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKA  181 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  181 (269)
                      ++++|+||||||.....++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.++...|++||+
T Consensus        77 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  156 (281)
T 3m1a_A           77 YGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFAGFSAYSATKA  156 (281)
T ss_dssp             HSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHH
T ss_pred             CCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCCCchHHHHHHH
Confidence            99999999999988777888999999999999999999999999999998888899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC-------hH------HHHHHHhcCCCCCCCCHHHHHHHHHHhc
Q 024338          182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG-------ED------LEKKILEKIPLGRYGQPEEVAGLVEFLA  248 (269)
Q Consensus       182 al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~-------~~------~~~~~~~~~~~~~~~~~~~~a~~~~~l~  248 (269)
                      +++.|+++++.|+++.||+|++|+||+++|++.....       ..      .........+.+++.+|+|+|+++++++
T Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~  236 (281)
T 3m1a_A          157 ALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDGSQPGDPAKAAAAIRLAL  236 (281)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC-----CBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhhccCCCCCCHHHHHHHHHHHH
Confidence            9999999999999999999999999999999854321       11      1123334456777889999999999999


Q ss_pred             cCCCCCCccccEEEec
Q 024338          249 LNPAAGYITGQVLTID  264 (269)
Q Consensus       249 ~~~~~~~~~G~~i~~d  264 (269)
                      +.+.    .+..+.+.
T Consensus       237 ~~~~----~~~~~~l~  248 (281)
T 3m1a_A          237 DTEK----TPLRLALG  248 (281)
T ss_dssp             HSSS----CCSEEEES
T ss_pred             hCCC----CCeEEecC
Confidence            6543    35566554

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=7.3e-41  Score=277.71  Aligned_cols=227  Identities=32%  Similarity=0.512  Sum_probs=199.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTV  105 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i  105 (269)
                      +|++|||||++|||++++++|+++|++|+++ .|+.+ .           .++.++.+|++|.++++++++++ +.++++
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~-~r~~~-~-----------~~~~~~~~D~~~~~~~~~~~~~~-~~~~~~   67 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVL-DLRRE-G-----------EDLIYVEGDVTREEDVRRAVARA-QEEAPL   67 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEE-ESSCC-S-----------SSSEEEECCTTCHHHHHHHHHHH-HHHSCE
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEE-ccCcc-c-----------cceEEEeCCCCCHHHHHHHHHHH-HhhCCc
Confidence            6899999999999999999999999999885 55543 1           23478999999999999999999 888999


Q ss_pred             cEEEEccCCCCCCcccCCC----HHHHHHHHHHHhHHHHHHHHHHHHHHHhCC---C---CeEEEEcCCccccCCCCChh
Q 024338          106 DILINNAGITRDTLLMRMK----KSQWQDVIDLNLTGVFLCTQAAAKIMMKKK---K---GRIINIASVVGLVGNIGQAN  175 (269)
Q Consensus       106 d~li~~ag~~~~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~---~~iv~isS~~~~~~~~~~~~  175 (269)
                      |++|||||.....++.+.+    .+++++.+++|+.+++.++++++|.|.+++   .   ++||++||..+..+.++...
T Consensus        68 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~  147 (242)
T 1uay_A           68 FAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAA  147 (242)
T ss_dssp             EEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHH
T ss_pred             eEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCch
Confidence            9999999987665555444    459999999999999999999999997654   3   49999999999999999999


Q ss_pred             hHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCC-CCCCCHHHHHHHHHHhccCCCCC
Q 024338          176 YSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPL-GRYGQPEEVAGLVEFLALNPAAG  254 (269)
Q Consensus       176 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~~~l~~~~~~~  254 (269)
                      |++||++++.++++++.|+++.||++++|+||+++|++.....+...+......|. +++.+|+|+|+++++|+++   .
T Consensus       148 Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~---~  224 (242)
T 1uay_A          148 YAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFPPRLGRPEEYAALVLHILEN---P  224 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHHHHHTTCCSSCSCCCHHHHHHHHHHHHHC---T
T ss_pred             hhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccchhHHHHHHhhCCCcccCCCHHHHHHHHHHHhcC---C
Confidence            99999999999999999999999999999999999998776665555566667777 8889999999999999964   5


Q ss_pred             CccccEEEecCCccC
Q 024338          255 YITGQVLTIDGGMVM  269 (269)
Q Consensus       255 ~~~G~~i~~dgg~~~  269 (269)
                      +++|++|.+|||+.+
T Consensus       225 ~~~G~~~~v~gG~~~  239 (242)
T 1uay_A          225 MLNGEVVRLDGALRM  239 (242)
T ss_dssp             TCCSCEEEESTTCCC
T ss_pred             CCCCcEEEEcCCeec
Confidence            799999999999864

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=100.00  E-value=3e-40  Score=273.12  Aligned_cols=226  Identities=28%  Similarity=0.418  Sum_probs=189.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      ..+|++|||||++|||++++++|+++|++|++ ..|+.+.++++.+++    .++.++.+|++|.++++++++++.+.++
T Consensus         3 ~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~-~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~   77 (234)
T 2ehd_A            3 GMKGAVLITGASRGIGEATARLLHAKGYRVGL-MARDEKRLQALAAEL----EGALPLPGDVREEGDWARAVAAMEEAFG   77 (234)
T ss_dssp             -CCCEEEESSTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHS----TTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHh----hhceEEEecCCCHHHHHHHHHHHHHHcC
Confidence            35799999999999999999999999999888 478887777666554    2677899999999999999999999999


Q ss_pred             CccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHH
Q 024338          104 TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGV  183 (269)
Q Consensus       104 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al  183 (269)
                      ++|+||||||.....++.+.+.+++++.+++|+.+++.+++.++|.|++++.++||++||..+..+.++...|+++|+++
T Consensus        78 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~  157 (234)
T 2ehd_A           78 ELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGL  157 (234)
T ss_dssp             CCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCCTTCHHHHHHHHHH
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCCCCCchhhHHHHHH
Confidence            99999999998877788889999999999999999999999999999888889999999999999999999999999999


Q ss_pred             HHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEEEe
Q 024338          184 IGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTI  263 (269)
Q Consensus       184 ~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~  263 (269)
                      +.++++++.|+++.||+++.|+||+++|++.....+.    . .      ..+|+|+|+++++++++ ...+++|+++..
T Consensus       158 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~----~-~------~~~~~dvA~~~~~l~~~-~~~~~~g~~~~~  225 (234)
T 2ehd_A          158 LGLAGAAMLDLREANVRVVNVLPGSVDTGFAGNTPGQ----A-W------KLKPEDVAQAVLFALEM-PGHAMVSEIELR  225 (234)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEECC---------------------------CCHHHHHHHHHHHHHS-CCSSCCCEEECC
T ss_pred             HHHHHHHHHHHhhcCcEEEEEEeCCCcCCcccccccc----c-C------CCCHHHHHHHHHHHhCC-CcccccceEEEe
Confidence            9999999999999999999999999999976532111    0 0      34899999999999954 567899998776


Q ss_pred             cCC
Q 024338          264 DGG  266 (269)
Q Consensus       264 dgg  266 (269)
                      ++.
T Consensus       226 ~~~  228 (234)
T 2ehd_A          226 PTR  228 (234)
T ss_dssp             C--
T ss_pred             ecC
Confidence            554

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=7.4e-41  Score=282.20  Aligned_cols=233  Identities=28%  Similarity=0.455  Sum_probs=195.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHc--CCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS--GGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      .+++|++|||||++|||++++++|+++|++|++ ..|+.+..++..+++.+.  +.++.++.+|++|.++++++++++.+
T Consensus         4 m~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (267)
T 2gdz_A            4 MVNGKVALVTGAAQGIGRAFAEALLLKGAKVAL-VDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVD   82 (267)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHH
Confidence            367999999999999999999999999999988 478888777777777543  34688999999999999999999999


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC---CCeEEEEcCCccccCCCCChhhH
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK---KGRIINIASVVGLVGNIGQANYS  177 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~~~iv~isS~~~~~~~~~~~~Y~  177 (269)
                      .++++|+||||||...        .++|++.+++|+.+++.+++.++|.|.+++   .++||++||..+..+.++...|+
T Consensus        83 ~~g~id~lv~~Ag~~~--------~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  154 (267)
T 2gdz_A           83 HFGRLDILVNNAGVNN--------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYC  154 (267)
T ss_dssp             HHSCCCEEEECCCCCC--------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHH
T ss_pred             HcCCCCEEEECCCCCC--------hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCCCchHH
Confidence            9999999999999753        356899999999999999999999997643   68999999999999999999999


Q ss_pred             HhHHHHHHHHHHH--HHHhccCCeEEEEEecCCccCCcccccChH-H-------HHHHHhcCCCCCCCCHHHHHHHHHHh
Q 024338          178 AAKAGVIGLTKTV--AKEYASRNINVNAIAPGFIASDMTAKLGED-L-------EKKILEKIPLGRYGQPEEVAGLVEFL  247 (269)
Q Consensus       178 ~sK~al~~~~~~l--a~e~~~~gi~v~~v~pG~v~t~~~~~~~~~-~-------~~~~~~~~~~~~~~~~~~~a~~~~~l  247 (269)
                      +||++++.|++++  +.|+++.||+||+|+||+++|++....... .       .+......+..++.+|+|+|+++++|
T Consensus       155 ~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l  234 (267)
T 2gdz_A          155 ASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITL  234 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhccccccccchhhhHHHHHHHHhccccCCCHHHHHHHHHHH
Confidence            9999999999995  688999999999999999999975432211 0       01111111222356899999999999


Q ss_pred             ccCCCCCCccccEEEecCCc
Q 024338          248 ALNPAAGYITGQVLTIDGGM  267 (269)
Q Consensus       248 ~~~~~~~~~~G~~i~~dgg~  267 (269)
                      ++++   +++|++|.+|+|.
T Consensus       235 ~s~~---~~~G~~~~v~gg~  251 (267)
T 2gdz_A          235 IEDD---ALNGAIMKITTSK  251 (267)
T ss_dssp             HHCT---TCSSCEEEEETTT
T ss_pred             hcCc---CCCCcEEEecCCC
Confidence            9643   4899999999875

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=100.00  E-value=9.4e-41  Score=279.54  Aligned_cols=228  Identities=26%  Similarity=0.310  Sum_probs=189.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCc-EEEEecCCHHHHHHHHHHHHHc--CCcEEEEEccCCCH-HHHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCK-VLVNYARSSKEAEEVCKEIEAS--GGQALTFGGDVSKE-ADVESMIKT   97 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~-v~i~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dls~~-~~~~~~~~~   97 (269)
                      |++++|+++||||++|||++++++|+++|++ |+++ +|+.+.  +..+++.+.  +.++.++.+|++|. +++++++++
T Consensus         1 m~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~-~r~~~~--~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   77 (254)
T 1sby_A            1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVIL-DRVENP--TALAELKAINPKVNITFHTYDVTVPVAESKKLLKK   77 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEE-ESSCCH--HHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEE-ecCchH--HHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHH
Confidence            4678999999999999999999999999997 7664 665421  112233322  45788999999998 999999999


Q ss_pred             HHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC---CCeEEEEcCCccccCCCCCh
Q 024338           98 AVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK---KGRIINIASVVGLVGNIGQA  174 (269)
Q Consensus        98 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~~~iv~isS~~~~~~~~~~~  174 (269)
                      +.+.++++|+||||||..        +.+++++.+++|+.+++.++++++|.|.+++   .++||++||..+..+.++..
T Consensus        78 ~~~~~g~id~lv~~Ag~~--------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  149 (254)
T 1sby_A           78 IFDQLKTVDILINGAGIL--------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVP  149 (254)
T ss_dssp             HHHHHSCCCEEEECCCCC--------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSH
T ss_pred             HHHhcCCCCEEEECCccC--------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCCCch
Confidence            999999999999999974        3467899999999999999999999996653   68999999999999999999


Q ss_pred             hhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC-----hHHHHHHHhcCCCCCCCCHHHHHHHHHHhcc
Q 024338          175 NYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG-----EDLEKKILEKIPLGRYGQPEEVAGLVEFLAL  249 (269)
Q Consensus       175 ~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~  249 (269)
                      .|++||++++.|+++++.++.+.||+|++|+||+++|++.....     ...........|.   .+|+|+|+.++++++
T Consensus       150 ~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~dvA~~i~~~~~  226 (254)
T 1sby_A          150 VYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPT---QTSEQCGQNFVKAIE  226 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSCC---EEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHHhcCCC---CCHHHHHHHHHHHHH
Confidence            99999999999999999999888999999999999999865421     1112223333343   389999999999984


Q ss_pred             CCCCCCccccEEEecCCc
Q 024338          250 NPAAGYITGQVLTIDGGM  267 (269)
Q Consensus       250 ~~~~~~~~G~~i~~dgg~  267 (269)
                          .+.+|+++.+|||+
T Consensus       227 ----~~~~G~~~~v~gG~  240 (254)
T 1sby_A          227 ----ANKNGAIWKLDLGT  240 (254)
T ss_dssp             ----HCCTTCEEEEETTE
T ss_pred             ----cCCCCCEEEEeCCc
Confidence                36899999999995

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=100.00  E-value=1.1e-41  Score=283.19  Aligned_cols=223  Identities=13%  Similarity=0.081  Sum_probs=192.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      ..++|++|||||++|||++++++|+++|++|+++ +|+++..+          ....++.+|++|.++++++++++.+.+
T Consensus         4 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~-~r~~~~~~----------~~~~~~~~D~~~~~~v~~~~~~~~~~~   72 (241)
T 1dhr_A            4 SGEARRVLVYGGRGALGSRCVQAFRARNWWVASI-DVVENEEA----------SASVIVKMTDSFTEQADQVTAEVGKLL   72 (241)
T ss_dssp             --CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEE-ESSCCTTS----------SEEEECCCCSCHHHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEE-eCChhhcc----------CCcEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            3568999999999999999999999999999885 66654321          245678899999999999999999999


Q ss_pred             --CCccEEEEccCCCCCCcc-cCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHh
Q 024338          103 --GTVDILINNAGITRDTLL-MRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAA  179 (269)
Q Consensus       103 --~~id~li~~ag~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  179 (269)
                        +++|+||||||.....++ .+.+.+++++.+++|+.+++.++++++|.|++  .|+||++||..+..+.++...|++|
T Consensus        73 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~as  150 (241)
T 1dhr_A           73 GDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE--GGLLTLAGAKAALDGTPGMIGYGMA  150 (241)
T ss_dssp             TTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHH
T ss_pred             CCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc--CCEEEEECCHHHccCCCCchHHHHH
Confidence              799999999998776677 78889999999999999999999999999954  5899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhc--cCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCcc
Q 024338          180 KAGVIGLTKTVAKEYA--SRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYIT  257 (269)
Q Consensus       180 K~al~~~~~~la~e~~--~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~  257 (269)
                      |++++.|+++++.|++  +.||+||+|+||+++|++.....+.        .......+|+|+|+.+++++ +++..+++
T Consensus       151 K~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~~~~~~--------~~~~~~~~~~~vA~~v~~l~-~~~~~~~~  221 (241)
T 1dhr_A          151 KGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPE--------ADFSSWTPLEFLVETFHDWI-TGNKRPNS  221 (241)
T ss_dssp             HHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTT--------SCGGGSEEHHHHHHHHHHHH-TTTTCCCT
T ss_pred             HHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCccccccCcc--------hhhccCCCHHHHHHHHHHHh-cCCCcCcc
Confidence            9999999999999998  8899999999999999975432111        11123347999999999999 56678999


Q ss_pred             ccEEEecCCc
Q 024338          258 GQVLTIDGGM  267 (269)
Q Consensus       258 G~~i~~dgg~  267 (269)
                      |+.+.+|||.
T Consensus       222 G~~~~v~g~~  231 (241)
T 1dhr_A          222 GSLIQVVTTD  231 (241)
T ss_dssp             TCEEEEEEET
T ss_pred             ceEEEEeCCC
Confidence            9999999874

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=100.00  E-value=2.6e-41  Score=294.44  Aligned_cols=240  Identities=14%  Similarity=0.034  Sum_probs=199.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHH-cCCcEEEEecCCHHHH------------HHHHHHHHHcCCcEEEEEccCCCHHH
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGK-AGCKVLVNYARSSKEA------------EEVCKEIEASGGQALTFGGDVSKEAD   90 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~-~G~~v~i~~~r~~~~~------------~~~~~~l~~~~~~~~~~~~Dls~~~~   90 (269)
                      -.+|++|||||++|||+++|+.|++ +|++|+++ .++.+..            +.+.+++.+.+.+...+.+|++|.++
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~-~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~  123 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGV-FFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEI  123 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEE-ECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHH
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEE-eCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHH
Confidence            4689999999999999999999999 99999885 4443221            23444566667788899999999999


Q ss_pred             HHHHHHHHHHhcCCccEEEEccCCC-------------CCCcc---------------------cCCCHHHHHHHHHHHh
Q 024338           91 VESMIKTAVDAWGTVDILINNAGIT-------------RDTLL---------------------MRMKKSQWQDVIDLNL  136 (269)
Q Consensus        91 ~~~~~~~~~~~~~~id~li~~ag~~-------------~~~~~---------------------~~~~~~~~~~~~~~n~  136 (269)
                      ++++++++.+.+|++|+||||||..             ...++                     .+.+.++|++.+++|.
T Consensus       124 v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~  203 (405)
T 3zu3_A          124 KQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMG  203 (405)
T ss_dssp             HHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhc
Confidence            9999999999999999999999974             22344                     6789999999999999


Q ss_pred             HHHH-HHHHHHHHHHHhCCCCeEEEEcCCccccCCCCC--hhhHHhHHHHHHHHHHHHHHhccC-CeEEEEEecCCccCC
Q 024338          137 TGVF-LCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQ--ANYSAAKAGVIGLTKTVAKEYASR-NINVNAIAPGFIASD  212 (269)
Q Consensus       137 ~~~~-~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~--~~Y~~sK~al~~~~~~la~e~~~~-gi~v~~v~pG~v~t~  212 (269)
                      .+.| .+++++.+.+..+++|+||++||+.+..+.|..  +.|++||+++++|+++|+.|+++. |||||+|+||++.|+
T Consensus       204 ~~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i~T~  283 (405)
T 3zu3_A          204 GEDWQMWIDALLDAGVLAEGAQTTAFTYLGEKITHDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVVSQ  283 (405)
T ss_dssp             SHHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCCCCH
T ss_pred             hhHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCcCCCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCCcCc
Confidence            9998 788887764333456899999999999999987  999999999999999999999999 999999999999999


Q ss_pred             cccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEEEecCCcc
Q 024338          213 MTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMV  268 (269)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg~~  268 (269)
                      +....+...........++++...||+|++.+.||+++    ++.|+.+.+|++..
T Consensus       284 ~s~~ip~~p~y~~~l~~~mkr~G~~Ed~a~~i~~L~sd----~l~~~~~~~D~~~~  335 (405)
T 3zu3_A          284 ASSAIPMMPLYLSLLFKVMKEKGTHEGCIEQVYSLYKD----SLCGDSPHMDQEGR  335 (405)
T ss_dssp             HHHTSTTHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHH----TTSSSCCCBCTTSC
T ss_pred             hhhcCCCCcHHHHHHHHHHhcCCCcHHHHHHHHHHHhc----cccCCCCCcCCCcC
Confidence            87665432111111112577788999999999999954    68899999998764

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=100.00  E-value=6.5e-41  Score=312.16  Aligned_cols=233  Identities=40%  Similarity=0.566  Sum_probs=188.4

Q ss_pred             ccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecC---------CHHHHHHHHHHHHHcCCcEEEEEccCCCHHH
Q 024338           20 AAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYAR---------SSKEAEEVCKEIEASGGQALTFGGDVSKEAD   90 (269)
Q Consensus        20 ~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~   90 (269)
                      ..++++||++|||||++|||+++|+.|+++|++|+++ +|         +.+.++++.++++..+...   .+|++|.++
T Consensus        13 ~~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~-~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~D~~d~~~   88 (613)
T 3oml_A           13 GKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVN-DLGGTHSGDGASQRAADIVVDEIRKAGGEA---VADYNSVID   88 (613)
T ss_dssp             --CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC---------------CHHHHHHHHHHTTCCE---EECCCCGGG
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE-eCCcccccccCCHHHHHHHHHHHHHhCCeE---EEEeCCHHH
Confidence            3468999999999999999999999999999999884 54         5666777888887765543   489999999


Q ss_pred             HHHHHHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCC
Q 024338           91 VESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGN  170 (269)
Q Consensus        91 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~  170 (269)
                      ++++++++.+.++++|+||||||+....++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.
T Consensus        89 ~~~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~  168 (613)
T 3oml_A           89 GAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGN  168 (613)
T ss_dssp             HHHHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCC
T ss_pred             HHHHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCC
Confidence            99999999999999999999999988888999999999999999999999999999999998888999999999999999


Q ss_pred             CCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccC
Q 024338          171 IGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALN  250 (269)
Q Consensus       171 ~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~  250 (269)
                      ++...|++||+|+.+|+++++.|+++.||+||+|+||++ |++.....+...   .      ...+|+++|++++||+++
T Consensus       169 ~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~-t~~~~~~~~~~~---~------~~~~pedvA~~v~~L~s~  238 (613)
T 3oml_A          169 FGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA-SRMTEGILPDIL---F------NELKPKLIAPVVAYLCHE  238 (613)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------CCCCCHHH---H------TTCCGGGTHHHHHHTTST
T ss_pred             CCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC-Chhhhhccchhh---h------hcCCHHHHHHHHHHhcCC
Confidence            999999999999999999999999999999999999975 665544332211   1      123799999999999954


Q ss_pred             CCCCCccccEEEecCCcc
Q 024338          251 PAAGYITGQVLTIDGGMV  268 (269)
Q Consensus       251 ~~~~~~~G~~i~~dgg~~  268 (269)
                       . .++||++|.+|||+.
T Consensus       239 -~-~~~tG~~i~vdGG~~  254 (613)
T 3oml_A          239 -S-CEDNGSYIESAAGWA  254 (613)
T ss_dssp             -T-CCCCSCEEEEETTEE
T ss_pred             -C-cCCCceEEEECCCeE
Confidence             4 689999999999985

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=2.5e-41  Score=280.14  Aligned_cols=223  Identities=16%  Similarity=0.137  Sum_probs=191.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc-
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW-  102 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~-  102 (269)
                      |++|++|||||++|||++++++|+++|++|+++ +|+++..+          ....++.+|++|.++++++++++.+.+ 
T Consensus         1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~-~r~~~~~~----------~~~~~~~~D~~~~~~~~~~~~~~~~~~~   69 (236)
T 1ooe_A            1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNI-DLSANDQA----------DSNILVDGNKNWTEQEQSILEQTASSLQ   69 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEE-ESSCCTTS----------SEEEECCTTSCHHHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE-ecCccccc----------cccEEEeCCCCCHHHHHHHHHHHHHHhC
Confidence            358999999999999999999999999999885 66654321          245678899999999999999999999 


Q ss_pred             -CCccEEEEccCCCCCCcc-cCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhH
Q 024338          103 -GTVDILINNAGITRDTLL-MRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       103 -~~id~li~~ag~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                       +++|+||||||.....++ .+.+.++|++.+++|+.+++.++++++|.|++  .++||++||..+..+.++...|++||
T Consensus        70 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~~sK  147 (236)
T 1ooe_A           70 GSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP--GGLLQLTGAAAAMGPTPSMIGYGMAK  147 (236)
T ss_dssp             TCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHH
T ss_pred             CCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEECchhhccCCCCcHHHHHHH
Confidence             799999999998776666 77889999999999999999999999999954  58999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhc--cCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccc
Q 024338          181 AGVIGLTKTVAKEYA--SRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITG  258 (269)
Q Consensus       181 ~al~~~~~~la~e~~--~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G  258 (269)
                      ++++.|+++++.|++  +.||+|++|+||+++|++.....+.        ....+..+|+|+|+.+++++.+++..+++|
T Consensus       148 ~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~--------~~~~~~~~~~dvA~~i~~~l~s~~~~~~~G  219 (236)
T 1ooe_A          148 AAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPN--------ADHSSWTPLSFISEHLLKWTTETSSRPSSG  219 (236)
T ss_dssp             HHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTT--------CCGGGCBCHHHHHHHHHHHHHCGGGCCCTT
T ss_pred             HHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchhhcCCC--------ccccccCCHHHHHHHHHHHHcCCCcccccc
Confidence            999999999999998  8899999999999999975432110        112234589999999984444667789999


Q ss_pred             cEEEecCCc
Q 024338          259 QVLTIDGGM  267 (269)
Q Consensus       259 ~~i~~dgg~  267 (269)
                      +.|.+|||.
T Consensus       220 ~~~~v~gg~  228 (236)
T 1ooe_A          220 ALLKITTEN  228 (236)
T ss_dssp             CEEEEEEET
T ss_pred             cEEEEecCC
Confidence            999999985

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=6.5e-40  Score=273.03  Aligned_cols=225  Identities=21%  Similarity=0.270  Sum_probs=189.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcC--CcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAG--CKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G--~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      +++|++|||||++|||++++++|+++|  ++|++ ..|+.+..+++.+ +  .+.++.++.+|++|.++++++++++.+.
T Consensus         1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~-~~r~~~~~~~l~~-~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~   76 (250)
T 1yo6_A            1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIA-TARDVEKATELKS-I--KDSRVHVLPLTVTCDKSLDTFVSKVGEI   76 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEE-EESSGGGCHHHHT-C--CCTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEE-EecCHHHHHHHHh-c--cCCceEEEEeecCCHHHHHHHHHHHHHh
Confidence            358999999999999999999999999  88888 4777766554432 1  2568899999999999999999999999


Q ss_pred             cC--CccEEEEccCCCC-CCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC------C-----CCeEEEEcCCccc
Q 024338          102 WG--TVDILINNAGITR-DTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKK------K-----KGRIINIASVVGL  167 (269)
Q Consensus       102 ~~--~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~-----~~~iv~isS~~~~  167 (269)
                      ++  ++|+||||||... ..++.+.+.+++++.+++|+.+++.++++++|.|.++      +     .++||++||..+.
T Consensus        77 ~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~  156 (250)
T 1yo6_A           77 VGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGS  156 (250)
T ss_dssp             HGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGC
T ss_pred             cCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccc
Confidence            98  9999999999877 6778888999999999999999999999999999765      5     7899999999998


Q ss_pred             cCC-------CCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHH
Q 024338          168 VGN-------IGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEV  240 (269)
Q Consensus       168 ~~~-------~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (269)
                      .+.       ++...|++||++++.|+++++.|+++.||++++|+||+++|++....               ...+|+++
T Consensus       157 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---------------~~~~~~~~  221 (250)
T 1yo6_A          157 ITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKN---------------AALTVEQS  221 (250)
T ss_dssp             STTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC----------------------------HHH
T ss_pred             cCCcccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCCC---------------CCCCHHHH
Confidence            776       67889999999999999999999999999999999999999975421               23489999


Q ss_pred             HHHHHHhccCCCCCCccccEEEecCCcc
Q 024338          241 AGLVEFLALNPAAGYITGQVLTIDGGMV  268 (269)
Q Consensus       241 a~~~~~l~~~~~~~~~~G~~i~~dgg~~  268 (269)
                      |+.++++++. ...+++|+++.+|||.+
T Consensus       222 a~~~~~~~~~-~~~~~~G~~~~~~g~~~  248 (250)
T 1yo6_A          222 TAELISSFNK-LDNSHNGRFFMRNLKPY  248 (250)
T ss_dssp             HHHHHHHHTT-CCGGGTTCEEETTEEEC
T ss_pred             HHHHHHHHhc-ccccCCCeEEEECCcCC
Confidence            9999999954 45679999999999853

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=100.00  E-value=9.2e-40  Score=282.70  Aligned_cols=241  Identities=23%  Similarity=0.245  Sum_probs=192.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEe----cCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNY----ARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKT   97 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~----~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~   97 (269)
                      |++++|++|||||++|||+++|++|+++|++|+++.    .|+.+.++++.+.+...+.++.++.+|++|.+++++++++
T Consensus         1 M~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~   80 (324)
T 3u9l_A            1 MVMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQ   80 (324)
T ss_dssp             ----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHH
Confidence            456789999999999999999999999999998742    3456677777777777788899999999999999999999


Q ss_pred             HHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccC-CCCChhh
Q 024338           98 AVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVG-NIGQANY  176 (269)
Q Consensus        98 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~-~~~~~~Y  176 (269)
                      +.+++|++|+||||||+....++.+.+.+++++.+++|+.+++.++++++|.|++++.|+||++||..+..+ .++...|
T Consensus        81 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~~~~~~Y  160 (324)
T 3u9l_A           81 IIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPPYLAPY  160 (324)
T ss_dssp             HHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCCSSCHHH
T ss_pred             HHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCCCcchhH
Confidence            999999999999999998888899999999999999999999999999999999888999999999999854 5778899


Q ss_pred             HHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccc---c-C--hHH------------HHHHHhc--CCCCCCCC
Q 024338          177 SAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAK---L-G--EDL------------EKKILEK--IPLGRYGQ  236 (269)
Q Consensus       177 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~---~-~--~~~------------~~~~~~~--~~~~~~~~  236 (269)
                      ++||+++++|+++++.|+++.||+|++|+||+++|++...   . .  ...            .+.....  .......+
T Consensus       161 ~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  240 (324)
T 3u9l_A          161 FAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPNAGLGEEIKKAFAAIVPPDAD  240 (324)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHHHHTTTTTHHHHHHHHHHHTSCTTCC
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhccccccCCHHHHHHHHHHhcCCCCC
Confidence            9999999999999999999999999999999999765311   0 0  100            0111110  01112358


Q ss_pred             HHHHHHHHHHhccCCCCCCccccEEEec
Q 024338          237 PEEVAGLVEFLALNPAAGYITGQVLTID  264 (269)
Q Consensus       237 ~~~~a~~~~~l~~~~~~~~~~G~~i~~d  264 (269)
                      |+++|++++.++..+..  .....+.++
T Consensus       241 p~~vA~aiv~~~~~~~~--~~~~~~~~g  266 (324)
T 3u9l_A          241 VSLVADAIVRVVGTASG--KRPFRVHVD  266 (324)
T ss_dssp             THHHHHHHHHHHTSCTT--CCCSEEEEC
T ss_pred             HHHHHHHHHHHhcCCCC--CCCeEEEeC
Confidence            89999999999865532  234566664

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=100.00  E-value=2.4e-41  Score=297.17  Aligned_cols=241  Identities=15%  Similarity=0.068  Sum_probs=196.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHH-cCCcEEEEecCCHHHH------------HHHHHHHHHcCCcEEEEEccCCCHHHH
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGK-AGCKVLVNYARSSKEA------------EEVCKEIEASGGQALTFGGDVSKEADV   91 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~-~G~~v~i~~~r~~~~~------------~~~~~~l~~~~~~~~~~~~Dls~~~~~   91 (269)
                      .+|++|||||++|||+++|+.|++ +|++|+++ +|+.+..            ..+.+++++.+.+...+.+|++|.+++
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~-~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v  138 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGV-FFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAAR  138 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEE-ECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEE-eCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHH
Confidence            489999999999999999999999 99999885 5554322            224456666678899999999999999


Q ss_pred             HHHHHHHHHhc-CCccEEEEccCCC-------------CCCcc---------------------cCCCHHHHHHHHHHHh
Q 024338           92 ESMIKTAVDAW-GTVDILINNAGIT-------------RDTLL---------------------MRMKKSQWQDVIDLNL  136 (269)
Q Consensus        92 ~~~~~~~~~~~-~~id~li~~ag~~-------------~~~~~---------------------~~~~~~~~~~~~~~n~  136 (269)
                      +++++++.+.+ |+||+||||||..             ...++                     .+.+.++|++.+++|.
T Consensus       139 ~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~  218 (422)
T 3s8m_A          139 AQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMG  218 (422)
T ss_dssp             HHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhc
Confidence            99999999999 9999999999972             22333                     3679999999999999


Q ss_pred             HHHH-HHHHHHHHHHHhCCCCeEEEEcCCccccCCCCC--hhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCc
Q 024338          137 TGVF-LCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQ--ANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDM  213 (269)
Q Consensus       137 ~~~~-~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~--~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~  213 (269)
                      .+.| .+++++.+.+..+++|+||++||+.+..+.|..  +.|++||+++.+|+++|+.|+++.|||||+|+||+++|++
T Consensus       219 ~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T~~  298 (422)
T 3s8m_A          219 GQDWELWIDALEGAGVLADGARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQA  298 (422)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGHHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTT
T ss_pred             hhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccCCCccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcChh
Confidence            9987 788887764433456899999999999988866  9999999999999999999999999999999999999999


Q ss_pred             ccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCcc-ccEEEecCCcc
Q 024338          214 TAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYIT-GQVLTIDGGMV  268 (269)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~-G~~i~~dgg~~  268 (269)
                      ................++++...||+|++.+.||+++ . -+.+ |+...+|++..
T Consensus       299 ~~~ip~~~~~~~~~~~~m~r~G~pEdva~~v~~L~sd-~-ly~~~~~~~~~d~~~~  352 (422)
T 3s8m_A          299 SAAIPVMPLYISMVYKIMKEKGLHEGTIEQLDRLFRE-R-LYRQDGQPAEVDEQNR  352 (422)
T ss_dssp             GGGSTHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHH-T-TTCTTCCCCCCCTTSC
T ss_pred             hhcCCCChHHHHHHHhhhcCCcChHHHHHHHHHHhcc-h-hhccCCCCcccCCCCC
Confidence            8766433221112222677888999999999999954 2 2554 67766887653

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=100.00  E-value=1.3e-40  Score=278.28  Aligned_cols=223  Identities=17%  Similarity=0.166  Sum_probs=192.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      .+.-+|++|||||++|||+++|++|+++|++|+++ +|+.+..+            ...+.+|++|.++++++++++.++
T Consensus        18 ~~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~-~r~~~~~~------------~~~~~~d~~d~~~v~~~~~~~~~~   84 (251)
T 3orf_A           18 GSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISI-DFRENPNA------------DHSFTIKDSGEEEIKSVIEKINSK   84 (251)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ESSCCTTS------------SEEEECSCSSHHHHHHHHHHHHTT
T ss_pred             ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE-eCCccccc------------ccceEEEeCCHHHHHHHHHHHHHH
Confidence            34447999999999999999999999999998885 66654321            135789999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCc-ccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhH
Q 024338          102 WGTVDILINNAGITRDTL-LMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                      ++++|+||||||.....+ +.+.+.+++++.+++|+.+++.++++++|.|++  .|+||++||..+..+.++...|++||
T Consensus        85 ~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~~sK  162 (251)
T 3orf_A           85 SIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQ--GGLFVLTGASAALNRTSGMIAYGATK  162 (251)
T ss_dssp             TCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHH
T ss_pred             cCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhcc--CCEEEEEechhhccCCCCCchhHHHH
Confidence            999999999999876654 677889999999999999999999999999954  58999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhc--cCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccc
Q 024338          181 AGVIGLTKTVAKEYA--SRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITG  258 (269)
Q Consensus       181 ~al~~~~~~la~e~~--~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G  258 (269)
                      ++++.|+++++.|++  +.||+|++|+||+++|++....        ....+.+++.+|+|+|+++++|++++.+.+++|
T Consensus       163 aa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~~~--------~~~~~~~~~~~~~dva~~i~~l~~~~~~~~~tG  234 (251)
T 3orf_A          163 AATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTNRKY--------MSDANFDDWTPLSEVAEKLFEWSTNSDSRPTNG  234 (251)
T ss_dssp             HHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHHHHH--------CTTSCGGGSBCHHHHHHHHHHHHHCGGGCCCTT
T ss_pred             HHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcchhhh--------cccccccccCCHHHHHHHHHHHhcCccccCCcc
Confidence            999999999999987  8899999999999999875432        223355667799999999999996647789999


Q ss_pred             cEEEecCCc
Q 024338          259 QVLTIDGGM  267 (269)
Q Consensus       259 ~~i~~dgg~  267 (269)
                      ++|.+++|.
T Consensus       235 ~~i~v~~g~  243 (251)
T 3orf_A          235 SLVKFETKS  243 (251)
T ss_dssp             CEEEEEEET
T ss_pred             eEEEEecCC
Confidence            999998764

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=2.1e-39  Score=274.09  Aligned_cols=221  Identities=27%  Similarity=0.392  Sum_probs=197.9

Q ss_pred             ccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHH
Q 024338           20 AAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAV   99 (269)
Q Consensus        20 ~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~   99 (269)
                      ..+++++|++|||||++|||++++++|+++|++|++ .+|+.+..+++.++++..+.++.++.+|++|.++++++++++.
T Consensus        25 ~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  103 (272)
T 1yb1_A           25 RRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVL-WDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVK  103 (272)
T ss_dssp             CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEE-EEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHH
Confidence            356789999999999999999999999999999888 5788888888888888777789999999999999999999999


Q ss_pred             HhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHh
Q 024338          100 DAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAA  179 (269)
Q Consensus       100 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  179 (269)
                      +.++++|+||||||.....++.+.+.+++++.+++|+.+++.+++.++|.|.+++.++||++||..+..+.++...|++|
T Consensus       104 ~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  183 (272)
T 1yb1_A          104 AEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSS  183 (272)
T ss_dssp             HHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHH
T ss_pred             HHCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCchhHHHH
Confidence            99999999999999887777788889999999999999999999999999988888999999999999888888999999


Q ss_pred             HHHHHHHHHHHHHHhc---cCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCC
Q 024338          180 KAGVIGLTKTVAKEYA---SRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNP  251 (269)
Q Consensus       180 K~al~~~~~~la~e~~---~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~  251 (269)
                      |++++.|+++++.|++   +.||+|++|+||+++|++....   .       .+.+++.+|+|+|+.+++++..+
T Consensus       184 K~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~~---~-------~~~~~~~~~~dva~~i~~~~~~~  248 (272)
T 1yb1_A          184 KFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP---S-------TSLGPTLEPEEVVNRLMHGILTE  248 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT---H-------HHHCCCCCHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCccccc---c-------ccccCCCCHHHHHHHHHHHHHcC
Confidence            9999999999999997   6799999999999999985421   0       12345679999999999999654

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=100.00  E-value=4.9e-39  Score=270.78  Aligned_cols=233  Identities=17%  Similarity=0.284  Sum_probs=197.8

Q ss_pred             ccccCCCCCCEEEEeCCCCchHHHHHHHHHHcC---CcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHH
Q 024338           18 NEAAQNVEAPVAVVTGASRGIGRAVATSLGKAG---CKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESM   94 (269)
Q Consensus        18 ~~~~~~~~~k~vlItGas~giG~~~a~~l~~~G---~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~   94 (269)
                      .....++++|++|||||++|||++++++|+++|   ++|+++ .|+.+..+.+ +++...+.++.++.+|++|.++++++
T Consensus        13 ~~~~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~-~r~~~~~~~~-~~l~~~~~~~~~~~~Dl~~~~~v~~~   90 (267)
T 1sny_A           13 GLVPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTT-CRNREQAKEL-EDLAKNHSNIHILEIDLRNFDAYDKL   90 (267)
T ss_dssp             -------CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEE-ESCTTSCHHH-HHHHHHCTTEEEEECCTTCGGGHHHH
T ss_pred             cccccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEE-ecChhhhHHH-HHhhccCCceEEEEecCCChHHHHHH
Confidence            334467889999999999999999999999999   888884 6776554433 34444467899999999999999999


Q ss_pred             HHHHHHhcC--CccEEEEccCCCC-CCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC------C-----CCeEEE
Q 024338           95 IKTAVDAWG--TVDILINNAGITR-DTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKK------K-----KGRIIN  160 (269)
Q Consensus        95 ~~~~~~~~~--~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~-----~~~iv~  160 (269)
                      ++++.+.++  ++|+||||||... ..++.+.+.+++++.+++|+.+++.++++++|.|.++      +     .++||+
T Consensus        91 ~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~  170 (267)
T 1sny_A           91 VADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIIN  170 (267)
T ss_dssp             HHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEE
T ss_pred             HHHHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEE
Confidence            999999998  8999999999877 6778889999999999999999999999999999765      3     689999


Q ss_pred             EcCCccccCCC---CChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCH
Q 024338          161 IASVVGLVGNI---GQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQP  237 (269)
Q Consensus       161 isS~~~~~~~~---~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (269)
                      +||..+..+.+   +...|++||++++.|+++++.|+++.||++++|+||+++|++....               ...+|
T Consensus       171 isS~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---------------~~~~~  235 (267)
T 1sny_A          171 MSSILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSS---------------APLDV  235 (267)
T ss_dssp             ECCGGGCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCTT---------------CSBCH
T ss_pred             EecccccccCCCCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCCC---------------CCCCH
Confidence            99999887753   7788999999999999999999999999999999999999986431               23589


Q ss_pred             HHHHHHHHHhccCCCCCCccccEEEecCCcc
Q 024338          238 EEVAGLVEFLALNPAAGYITGQVLTIDGGMV  268 (269)
Q Consensus       238 ~~~a~~~~~l~~~~~~~~~~G~~i~~dgg~~  268 (269)
                      +++|+.+++++.. .....+|+.+.+||+.+
T Consensus       236 ~~~a~~~~~~~~~-~~~~~~G~~~~~~g~~~  265 (267)
T 1sny_A          236 PTSTGQIVQTISK-LGEKQNGGFVNYDGTPL  265 (267)
T ss_dssp             HHHHHHHHHHHHH-CCGGGTTCEECTTSCBC
T ss_pred             HHHHHHHHHHHHh-cCcCCCCcEEccCCcCc
Confidence            9999999999954 45679999999999864

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=100.00  E-value=2.5e-40  Score=277.18  Aligned_cols=217  Identities=23%  Similarity=0.349  Sum_probs=171.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCcc
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVD  106 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id  106 (269)
                      |++|||||++|||++++++|+++|++|+++ .|+.+..+.             .+.+|++|.++++++++++   .+++|
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~-~r~~~~~~~-------------~~~~Dl~~~~~v~~~~~~~---~~~id   64 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGI-DIRDAEVIA-------------DLSTAEGRKQAIADVLAKC---SKGMD   64 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ESSSSSEEC-------------CTTSHHHHHHHHHHHHTTC---TTCCS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEE-eCCchhhcc-------------ccccCCCCHHHHHHHHHHh---CCCCC
Confidence            789999999999999999999999999885 666543211             1678999999998887743   37999


Q ss_pred             EEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccc-------------------
Q 024338          107 ILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGL-------------------  167 (269)
Q Consensus       107 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~-------------------  167 (269)
                      +||||||.....       +.+++.+++|+.+++.++++++|.|.+++.++||++||..+.                   
T Consensus        65 ~lv~~Ag~~~~~-------~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~  137 (257)
T 1fjh_A           65 GLVLCAGLGPQT-------KVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEA  137 (257)
T ss_dssp             EEEECCCCCTTC-------SSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHH
T ss_pred             EEEECCCCCCCc-------ccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchh
Confidence            999999976421       238999999999999999999999988878999999999988                   


Q ss_pred             ---------cCCCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc-ChHHHHHHHh--cCCCCCCC
Q 024338          168 ---------VGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL-GEDLEKKILE--KIPLGRYG  235 (269)
Q Consensus       168 ---------~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-~~~~~~~~~~--~~~~~~~~  235 (269)
                               .+.++...|++||++++.|+++++.|+++.||+|++|+||+++|++.... .+........  ..|++++.
T Consensus       138 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (257)
T 1fjh_A          138 KARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRRA  217 (257)
T ss_dssp             HHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CCCSTTSCC
T ss_pred             hhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccchhHHHHHHhcccccCCCC
Confidence                     34456789999999999999999999999999999999999999987654 2222222222  45777888


Q ss_pred             CHHHHHHHHHHhccCCCCCCccccEEEecCCcc
Q 024338          236 QPEEVAGLVEFLALNPAAGYITGQVLTIDGGMV  268 (269)
Q Consensus       236 ~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg~~  268 (269)
                      +|+|+|+++++|++ +++++++|++|.+|||+.
T Consensus       218 ~~~dvA~~~~~l~~-~~~~~~tG~~~~vdgG~~  249 (257)
T 1fjh_A          218 EPSEMASVIAFLMS-PAASYVHGAQIVIDGGID  249 (257)
T ss_dssp             CTHHHHHHHHHHTS-GGGTTCCSCEEEESTTHH
T ss_pred             CHHHHHHHHHHHhC-chhcCCcCCEEEECCCcc
Confidence            99999999999994 566789999999999974

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=100.00  E-value=1.3e-39  Score=271.29  Aligned_cols=226  Identities=24%  Similarity=0.319  Sum_probs=161.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      |++++|++|||||++|||+++|++|++ |+.|++ .+|+.+.++++.+     ..++.++.+|+++.++ .+.+.+..+.
T Consensus         1 m~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~-~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~-~~~~~~~~~~   72 (245)
T 3e9n_A            1 MSLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYA-LGRNPEHLAALAE-----IEGVEPIESDIVKEVL-EEGGVDKLKN   72 (245)
T ss_dssp             -----CEEEEESTTSHHHHHHHHHHTT-TSEEEE-EESCHHHHHHHHT-----STTEEEEECCHHHHHH-TSSSCGGGTT
T ss_pred             CCCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEE-EeCCHHHHHHHHh-----hcCCcceecccchHHH-HHHHHHHHHh
Confidence            467899999999999999999999988 888877 5788877665543     2468889999998877 5555566677


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKA  181 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  181 (269)
                      ++++|+||||||.....++.+.+.++|++.+++|+.+++.+++.++|.|++++ |+||++||..+..+.++...|++||+
T Consensus        73 ~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~  151 (245)
T 3e9n_A           73 LDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNGPHPGNTIYAASKH  151 (245)
T ss_dssp             CSCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC----------CHHHHHHHH
T ss_pred             cCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCcccccCCCCchHHHHHHH
Confidence            88999999999998878888899999999999999999999999999997654 89999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEE
Q 024338          182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL  261 (269)
Q Consensus       182 al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i  261 (269)
                      +++.|+++++.|+++.||+|++|+||+++|++.....+..    ....+.+++.+|+|+|+++++|++.+.    +++++
T Consensus       152 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~----~~~~~~~~~~~p~dvA~~i~~l~~~~~----~~~~~  223 (245)
T 3e9n_A          152 ALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMDSQ----GTNFRPEIYIEPKEIANAIRFVIDAGE----TTQIT  223 (245)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECCC--------------------CCGGGSCHHHHHHHHHHHHTSCT----TEEEE
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhhhhh----hcccccccCCCHHHHHHHHHHHHcCCC----cccee
Confidence            9999999999999999999999999999999876543322    223445567799999999999996654    35555


Q ss_pred             Eec
Q 024338          262 TID  264 (269)
Q Consensus       262 ~~d  264 (269)
                      .+|
T Consensus       224 ~i~  226 (245)
T 3e9n_A          224 NVD  226 (245)
T ss_dssp             EEE
T ss_pred             eeE
Confidence            543

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=100.00  E-value=3.2e-38  Score=271.04  Aligned_cols=222  Identities=26%  Similarity=0.361  Sum_probs=189.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcC-CcEEEEEccCCCH-HHHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASG-GQALTFGGDVSKE-ADVESMIKTAV   99 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dls~~-~~~~~~~~~~~   99 (269)
                      ..+++|++|||||++|||+++|++|+++|++|++ .+|+.+..++..+++.+.+ .++.++.+|++|. ++++++++++.
T Consensus         8 ~~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~   86 (311)
T 3o26_A            8 TVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVL-TCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIK   86 (311)
T ss_dssp             ----CCEEEESSCSSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHH
T ss_pred             ccCCCcEEEEecCCchHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHH
Confidence            4568999999999999999999999999999888 5899998888888887664 4799999999998 99999999999


Q ss_pred             HhcCCccEEEEccCCCCC------------------------------CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHH
Q 024338          100 DAWGTVDILINNAGITRD------------------------------TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKI  149 (269)
Q Consensus       100 ~~~~~id~li~~ag~~~~------------------------------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  149 (269)
                      +.++++|+||||||+...                              .++.+.+.+++++.+++|+.+++.+++.++|.
T Consensus        87 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  166 (311)
T 3o26_A           87 THFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPL  166 (311)
T ss_dssp             HHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             HhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHh
Confidence            999999999999998642                              13456788999999999999999999999999


Q ss_pred             HHhCCCCeEEEEcCCccccCC-------------------------------------------CCChhhHHhHHHHHHH
Q 024338          150 MMKKKKGRIINIASVVGLVGN-------------------------------------------IGQANYSAAKAGVIGL  186 (269)
Q Consensus       150 l~~~~~~~iv~isS~~~~~~~-------------------------------------------~~~~~Y~~sK~al~~~  186 (269)
                      |++++.++||++||..+..+.                                           ++...|++||++++.|
T Consensus       167 l~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~  246 (311)
T 3o26_A          167 LQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAY  246 (311)
T ss_dssp             HTTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHH
T ss_pred             hccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHH
Confidence            988888999999999887653                                           4567899999999999


Q ss_pred             HHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEEE
Q 024338          187 TKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLT  262 (269)
Q Consensus       187 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~  262 (269)
                      +++++.|+.+  |+|++|+||+|+|++.....               ..++++.++.+++++..++ ...+|..+.
T Consensus       247 ~~~la~e~~~--i~v~~v~PG~v~T~~~~~~~---------------~~~~~~~a~~~~~~~~~~~-~~~~g~~~~  304 (311)
T 3o26_A          247 TRVLANKIPK--FQVNCVCPGLVKTEMNYGIG---------------NYTAEEGAEHVVRIALFPD-DGPSGFFYD  304 (311)
T ss_dssp             HHHHHHHCTT--SEEEEECCCSBCSGGGTTCC---------------SBCHHHHHHHHHHHHTCCS-SCCCSCEET
T ss_pred             HHHHHhhcCC--ceEEEecCCceecCCcCCCC---------------CCCHHHHHHHHHHHHhCCC-CCCCceEec
Confidence            9999999864  99999999999999865432               1379999999999986654 345565553

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=100.00  E-value=2e-39  Score=281.05  Aligned_cols=234  Identities=24%  Similarity=0.268  Sum_probs=185.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHH---HHHHHHHHHH---HcCCcEEEEEccCCCHHHHHHHHHHH
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSK---EAEEVCKEIE---ASGGQALTFGGDVSKEADVESMIKTA   98 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~---~~~~~~~~l~---~~~~~~~~~~~Dls~~~~~~~~~~~~   98 (269)
                      ++|++|||||++|||++++++|+++|++|+++ .|+.+   ...+..+.+.   ..+.++.++.+|++|.++++++++++
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~   79 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKV-YATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERV   79 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEE-EEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCceEEE-EeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHH
Confidence            37899999999999999999999999997774 33322   2222333322   12357899999999999999999988


Q ss_pred             HHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHH
Q 024338           99 VDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSA  178 (269)
Q Consensus        99 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~  178 (269)
                      .  ++++|+||||||+....++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.++...|++
T Consensus        80 ~--~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~~~~~Y~a  157 (327)
T 1jtv_A           80 T--EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCA  157 (327)
T ss_dssp             T--TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHH
T ss_pred             h--cCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCCCChHHHH
Confidence            3  58999999999988777888899999999999999999999999999998878899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChH-----------HH---HHHHh--cCCCCCC-CCHHHHH
Q 024338          179 AKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGED-----------LE---KKILE--KIPLGRY-GQPEEVA  241 (269)
Q Consensus       179 sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~-----------~~---~~~~~--~~~~~~~-~~~~~~a  241 (269)
                      ||++++.|+++++.|+++.||+|++|+||+++|++.......           ..   .....  ..+.++. .+|+|+|
T Consensus       158 SK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA  237 (327)
T 1jtv_A          158 SKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVA  237 (327)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHHHHHHHHHhhhhcCCCHHHHH
Confidence            999999999999999999999999999999999986543110           00   00100  0011222 3899999


Q ss_pred             HHHHHhccCC--CCCCccccEE
Q 024338          242 GLVEFLALNP--AAGYITGQVL  261 (269)
Q Consensus       242 ~~~~~l~~~~--~~~~~~G~~i  261 (269)
                      +.++++++++  ..++++|+.+
T Consensus       238 ~~i~~l~~~~~~~~~~~tg~~~  259 (327)
T 1jtv_A          238 EVFLTALRAPKPTLRYFTTERF  259 (327)
T ss_dssp             HHHHHHHHCSSCCSEEESCSTT
T ss_pred             HHHHHHHcCCCCCeEEEeCchH
Confidence            9999998763  4567888754

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=100.00  E-value=5.7e-38  Score=264.80  Aligned_cols=223  Identities=25%  Similarity=0.364  Sum_probs=191.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHH-cCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGK-AGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~-~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      .++|++|||||++|||++++++|++ +|++|++ ..|+.+..++..+++...+.++.++.+|++|.++++++++++.+.+
T Consensus         2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   80 (276)
T 1wma_A            2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVL-TARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEY   80 (276)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEE-EESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEE-EeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhc
Confidence            3689999999999999999999999 9999888 5788888888888887777788899999999999999999999999


Q ss_pred             CCccEEEEccCCCCCCcccCCC-HHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccC------------
Q 024338          103 GTVDILINNAGITRDTLLMRMK-KSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVG------------  169 (269)
Q Consensus       103 ~~id~li~~ag~~~~~~~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~------------  169 (269)
                      +++|+||||||...... ...+ .+++++.+++|+.+++.++++++|.|.+  .++||++||..+..+            
T Consensus        81 g~id~li~~Ag~~~~~~-~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~~sS~~~~~~~~~~~~~~~~~~  157 (276)
T 1wma_A           81 GGLDVLVNNAGIAFKVA-DPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP--QGRVVNVSSIMSVRALKSCSPELQQKF  157 (276)
T ss_dssp             SSEEEEEECCCCCCCTT-CCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHHHHTSCHHHHHHH
T ss_pred             CCCCEEEECCcccccCC-CccccHHHHHhhhheeeeeHHHHHHHHHHhhCC--CCEEEEECChhhhcccccCChhHHhhc
Confidence            99999999999865433 2334 5899999999999999999999998853  479999999877632            


Q ss_pred             -----------------------------CCCChhhHHhHHHHHHHHHHHHHHhcc----CCeEEEEEecCCccCCcccc
Q 024338          170 -----------------------------NIGQANYSAAKAGVIGLTKTVAKEYAS----RNINVNAIAPGFIASDMTAK  216 (269)
Q Consensus       170 -----------------------------~~~~~~Y~~sK~al~~~~~~la~e~~~----~gi~v~~v~pG~v~t~~~~~  216 (269)
                                                   ..+...|++||++++.|+++++.++++    .||+|++|+||+++|++...
T Consensus       158 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~  237 (276)
T 1wma_A          158 RSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP  237 (276)
T ss_dssp             HCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT
T ss_pred             cccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc
Confidence                                         012378999999999999999999987    79999999999999998653


Q ss_pred             cChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCC-CCCccccEEEecCC
Q 024338          217 LGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPA-AGYITGQVLTIDGG  266 (269)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~-~~~~~G~~i~~dgg  266 (269)
                                     ....+|+|+|+.+++|++++. ..+++|++|. |++
T Consensus       238 ---------------~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~-~~~  272 (276)
T 1wma_A          238 ---------------KATKSPEEGAETPVYLALLPPDAEGPHGQFVS-EKR  272 (276)
T ss_dssp             ---------------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE-TTE
T ss_pred             ---------------cccCChhHhhhhHhhhhcCcccccccCceEec-cCc
Confidence                           134589999999999997564 4689999998 554

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=100.00  E-value=6.7e-39  Score=283.68  Aligned_cols=241  Identities=11%  Similarity=0.024  Sum_probs=197.4

Q ss_pred             CCCCEEEEeCCCCchHHH--HHHHHHHcCCcEEEEecCCHHH------------HHHHHHHHHHcCCcEEEEEccCCCHH
Q 024338           24 VEAPVAVVTGASRGIGRA--VATSLGKAGCKVLVNYARSSKE------------AEEVCKEIEASGGQALTFGGDVSKEA   89 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~--~a~~l~~~G~~v~i~~~r~~~~------------~~~~~~~l~~~~~~~~~~~~Dls~~~   89 (269)
                      ..+|++|||||++|||++  +++.|+++|++|+++ .|+.+.            .+.+.+.+++.+.++..+.+|++|.+
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~  136 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGV-SYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNE  136 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEE-ECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEE-ecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHH
Confidence            689999999999999999  999999999999885 554321            24455555666778999999999999


Q ss_pred             HHHHHHHHHHHhcCCccEEEEccCCC-------------CCCcc---------------------cCCCHHHHHHHHHHH
Q 024338           90 DVESMIKTAVDAWGTVDILINNAGIT-------------RDTLL---------------------MRMKKSQWQDVIDLN  135 (269)
Q Consensus        90 ~~~~~~~~~~~~~~~id~li~~ag~~-------------~~~~~---------------------~~~~~~~~~~~~~~n  135 (269)
                      +++++++++.+.+|+||+||||||..             ...++                     .+.+.++|+..+++|
T Consensus       137 ~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn  216 (418)
T 4eue_A          137 TKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVM  216 (418)
T ss_dssp             HHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHh
Confidence            99999999999999999999999974             22233                     457999999999999


Q ss_pred             hHHHH-HHHHHHHHHHHhCCCCeEEEEcCCccccCCCCC--hhhHHhHHHHHHHHHHHHHHhcc-CCeEEEEEecCCccC
Q 024338          136 LTGVF-LCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQ--ANYSAAKAGVIGLTKTVAKEYAS-RNINVNAIAPGFIAS  211 (269)
Q Consensus       136 ~~~~~-~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~--~~Y~~sK~al~~~~~~la~e~~~-~gi~v~~v~pG~v~t  211 (269)
                      ..+.+ .+++++.+.+..+++|+||++||+.+..+.|.+  +.|++||+|+++|+++|+.|+++ .|||||+|+||+++|
T Consensus       217 ~~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~v~T  296 (418)
T 4eue_A          217 GGEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTYKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKALVT  296 (418)
T ss_dssp             SSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCCCCC
T ss_pred             hHHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCcCcC
Confidence            99888 778887765544557899999999999999988  99999999999999999999999 999999999999999


Q ss_pred             CcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEEEecCCcc
Q 024338          212 DMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMV  268 (269)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg~~  268 (269)
                      ++................++++...+|+|++.+.+|+++   .+.+|+.+.+|+|..
T Consensus       297 ~~s~~ip~~p~y~~~~~~~mk~~G~~E~v~e~~~~L~sd---~~~~g~~~~~D~~~~  350 (418)
T 4eue_A          297 KASAYIPTFPLYAAILYKVMKEKNIHENCIMQIERMFSE---KIYSNEKIQFDDKGR  350 (418)
T ss_dssp             HHHHTSTTHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHH---TTSSSSCCCCCTTSC
T ss_pred             hhhhcCCCCcHHHHHHHHHHhhcCChHHHHHHHHHHhhc---cccCCCccccCCCce
Confidence            987665432111111111345567899999999999954   367899999998653

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=100.00  E-value=1.2e-36  Score=258.99  Aligned_cols=219  Identities=26%  Similarity=0.307  Sum_probs=188.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCC-cEEEEEccCCCHHHHHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGG-QALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      ..+++|++|||||++|||++++++|+++|++|++ ++|+.+.++++.+++.+.+. ++.++.+|++|.++++++++++.+
T Consensus        24 ~~~~~k~vlITGasggIG~~la~~l~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  102 (286)
T 1xu9_A           24 EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVV-TARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGK  102 (286)
T ss_dssp             GGGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hhcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999888 58898888888888766554 788999999999999999999999


Q ss_pred             hcCCccEEEEc-cCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHh
Q 024338          101 AWGTVDILINN-AGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAA  179 (269)
Q Consensus       101 ~~~~id~li~~-ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  179 (269)
                      .++++|+|||| +|... .++.+.+.+++++.+++|+.+++.++++++|.|.++ .++||++||..+..+.++...|++|
T Consensus       103 ~~g~iD~li~naag~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~as  180 (286)
T 1xu9_A          103 LMGGLDMLILNHITNTS-LNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGKVAYPMVAAYSAS  180 (286)
T ss_dssp             HHTSCSEEEECCCCCCC-CCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGTSCCTTCHHHHHH
T ss_pred             HcCCCCEEEECCccCCC-CccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC-CCEEEEECCcccccCCCCccHHHHH
Confidence            99999999999 56543 345567899999999999999999999999998654 5899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHh--ccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCC
Q 024338          180 KAGVIGLTKTVAKEY--ASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNP  251 (269)
Q Consensus       180 K~al~~~~~~la~e~--~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~  251 (269)
                      |++++.|+++++.|+  ...||++++|+||+++|++.......        .......+|+++|+.++..+..+
T Consensus       181 K~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~--------~~~~~~~~~~~vA~~i~~~~~~~  246 (286)
T 1xu9_A          181 KFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSG--------IVHMQAAPKEECALEIIKGGALR  246 (286)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSCG--------GGGGGCBCHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHHHhccc--------cccCCCCCHHHHHHHHHHHHhcC
Confidence            999999999999999  67799999999999999975421110        00112458999999999988543

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=100.00  E-value=6.6e-37  Score=305.48  Aligned_cols=243  Identities=21%  Similarity=0.281  Sum_probs=202.1

Q ss_pred             ccCCCCCCEEEEeCCCCc-hHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHc----CCcEEEEEccCCCHHHHHHH
Q 024338           20 AAQNVEAPVAVVTGASRG-IGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS----GGQALTFGGDVSKEADVESM   94 (269)
Q Consensus        20 ~~~~~~~k~vlItGas~g-iG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dls~~~~~~~~   94 (269)
                      ..++++||++|||||++| ||+++|+.|+++|++|+++.+|+.+.++++.+++.+.    +.++.++.+|++|.++++++
T Consensus       669 ~~m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~al  748 (1887)
T 2uv8_A          669 NGVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEAL  748 (1887)
T ss_dssp             TCBCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHH
T ss_pred             ccCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHH
Confidence            346789999999999998 9999999999999999986678877777766666332    56789999999999999999


Q ss_pred             HHHHHHh-----cC-CccEEEEccCCCCCC-cccCCC--HHHHHHHHHHHhHHHHHHHHHH--HHHHHhCCCCeEEEEcC
Q 024338           95 IKTAVDA-----WG-TVDILINNAGITRDT-LLMRMK--KSQWQDVIDLNLTGVFLCTQAA--AKIMMKKKKGRIINIAS  163 (269)
Q Consensus        95 ~~~~~~~-----~~-~id~li~~ag~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~~--~~~l~~~~~~~iv~isS  163 (269)
                      ++++.+.     +| +||+||||||+.... ++.+.+  .++|++.+++|+.+++.+++.+  +|.|.+++.|+||++||
T Consensus       749 v~~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS  828 (1887)
T 2uv8_A          749 IEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSP  828 (1887)
T ss_dssp             HHHHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECS
T ss_pred             HHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcC
Confidence            9999998     66 999999999998777 788888  8999999999999999999988  68887666789999999


Q ss_pred             CccccCCCCChhhHHhHHHHHHH-HHHHHHHhccCCeEEEEEecCCcc-CCcccccChHHHHHHHhcCCCCCCCCHHHHH
Q 024338          164 VVGLVGNIGQANYSAAKAGVIGL-TKTVAKEYASRNINVNAIAPGFIA-SDMTAKLGEDLEKKILEKIPLGRYGQPEEVA  241 (269)
Q Consensus       164 ~~~~~~~~~~~~Y~~sK~al~~~-~~~la~e~~~~gi~v~~v~pG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  241 (269)
                      ..+..+  +...|++||+++++| ++.++.++++. |+||+|+||+++ |++..... . ........+. +..+|+|+|
T Consensus       829 ~ag~~g--g~~aYaASKAAL~~Lttr~lA~ela~~-IrVNaV~PG~V~tT~m~~~~~-~-~~~~~~~~pl-r~~sPEEVA  902 (1887)
T 2uv8_A          829 NHGTFG--GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSANN-I-IAEGIEKMGV-RTFSQKEMA  902 (1887)
T ss_dssp             CTTCSS--CBTTHHHHHHHGGGHHHHHHHSSCTTT-EEEEEEEECCEECC-----CC-T-THHHHHTTSC-CCEEHHHHH
T ss_pred             hHhccC--CCchHHHHHHHHHHHHHHHHHHHhCCC-eEEEEEEecccccccccccch-h-HHHHHHhcCC-CCCCHHHHH
Confidence            999887  778999999999999 89999999887 999999999999 78765321 1 1122334454 455899999


Q ss_pred             HHHHHhccCCCCCCccccEEEec--CCcc
Q 024338          242 GLVEFLALNPAAGYITGQVLTID--GGMV  268 (269)
Q Consensus       242 ~~~~~l~~~~~~~~~~G~~i~~d--gg~~  268 (269)
                      +.++||+++..+++++|+.|.+|  ||+.
T Consensus       903 ~avlfLaSd~~as~iTGq~I~VDVDGG~~  931 (1887)
T 2uv8_A          903 FNLLGLLTPEVVELCQKSPVMADLNGGLQ  931 (1887)
T ss_dssp             HHHHGGGSHHHHHHHHHSCEEEEESCSTT
T ss_pred             HHHHHHhCCCccccccCcEEEEECCCCee
Confidence            99999995432678999999875  9975

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=100.00  E-value=7.7e-36  Score=297.30  Aligned_cols=242  Identities=21%  Similarity=0.267  Sum_probs=201.7

Q ss_pred             ccCCCCCCEEEEeCCCCc-hHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHH----cCCcEEEEEccCCCHHHHHHH
Q 024338           20 AAQNVEAPVAVVTGASRG-IGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEA----SGGQALTFGGDVSKEADVESM   94 (269)
Q Consensus        20 ~~~~~~~k~vlItGas~g-iG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~----~~~~~~~~~~Dls~~~~~~~~   94 (269)
                      +.++++||++|||||++| ||+++|+.|+++|++|+++.+|+.+.+++..+++.+    .+.++.++.||++|.++++++
T Consensus       646 ~~m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~al  725 (1878)
T 2uv9_A          646 SGLTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEAL  725 (1878)
T ss_dssp             HCBCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHH
T ss_pred             cCCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHH
Confidence            446789999999999999 999999999999999988657777766665555532    256889999999999999999


Q ss_pred             HHHHHHh---cC-CccEEEEccCCCCCC-cccCCC--HHHHHHHHHHHhHHHHHHHHH--HHHHHHhCCCCeEEEEcCCc
Q 024338           95 IKTAVDA---WG-TVDILINNAGITRDT-LLMRMK--KSQWQDVIDLNLTGVFLCTQA--AAKIMMKKKKGRIINIASVV  165 (269)
Q Consensus        95 ~~~~~~~---~~-~id~li~~ag~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~--~~~~l~~~~~~~iv~isS~~  165 (269)
                      ++++.+.   +| +||+||||||+.... ++.+.+  .++|++.+++|+.+++.+++.  ++|.|.+++.|+||++||..
T Consensus       726 v~~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~a  805 (1878)
T 2uv9_A          726 VNYIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNH  805 (1878)
T ss_dssp             HHHHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCS
T ss_pred             HHHHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchh
Confidence            9999998   88 999999999988776 788888  899999999999999999987  67888666678999999999


Q ss_pred             cccCCCCChhhHHhHHHHHHHHHHHHHH-hccCCeEEEEEecCCcc-CCcccccChHHHHHHHhcCCCCCCCCHHHHHHH
Q 024338          166 GLVGNIGQANYSAAKAGVIGLTKTVAKE-YASRNINVNAIAPGFIA-SDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGL  243 (269)
Q Consensus       166 ~~~~~~~~~~Y~~sK~al~~~~~~la~e-~~~~gi~v~~v~pG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  243 (269)
                      +..+  +...|++||+++++|++.++.+ +++. |+||+|+||+++ |++....  ..........+. +..+|+|+|++
T Consensus       806 g~~g--g~~aYaASKAAL~aLt~~laAeEla~~-IrVNaVaPG~V~gT~m~~~~--~~~~~~~~~~pl-r~~sPeEVA~a  879 (1878)
T 2uv9_A          806 GTFG--NDGLYSESKLALETLFNRWYSESWGNY-LTICGAVIGWTRGTGLMSAN--NLVAEGVEKLGV-RTFSQQEMAFN  879 (1878)
T ss_dssp             SSSS--CCSSHHHHHHHHTTHHHHHHHSTTTTT-EEEEEEEECCBCCTTSCSHH--HHTHHHHHTTTC-CCBCHHHHHHH
T ss_pred             hccC--CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEecceecCcccccc--hhhHHHHHhcCC-CCCCHHHHHHH
Confidence            9887  5789999999999999877654 7766 999999999999 9986531  122223344454 34599999999


Q ss_pred             HHHhccCCCC-CCccccEEEe--cCCcc
Q 024338          244 VEFLALNPAA-GYITGQVLTI--DGGMV  268 (269)
Q Consensus       244 ~~~l~~~~~~-~~~~G~~i~~--dgg~~  268 (269)
                      ++||++ +.+ +++||+.+.+  |||+.
T Consensus       880 vlfLaS-d~a~s~iTGq~I~VDVDGG~~  906 (1878)
T 2uv9_A          880 LLGLMA-PAIVNLCQSDPVFADLNGGLQ  906 (1878)
T ss_dssp             HHHHHS-HHHHHHHTTSCEEEEESCSGG
T ss_pred             HHHHhC-CcccccccCcEEEEEcCCCcc
Confidence            999994 454 6899999987  59974

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.1e-37  Score=302.44  Aligned_cols=242  Identities=21%  Similarity=0.293  Sum_probs=201.6

Q ss_pred             cCCCCCCEEEEeCCCCc-hHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHc----CCcEEEEEccCCCHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRG-IGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS----GGQALTFGGDVSKEADVESMI   95 (269)
Q Consensus        21 ~~~~~~k~vlItGas~g-iG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dls~~~~~~~~~   95 (269)
                      .+++++|++|||||++| ||+++|+.|+++|++|+++.+|+.+.++++.+++.+.    +.++.++.+|++|.+++++++
T Consensus       471 ~msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLV  550 (1688)
T 2pff_A          471 XVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALI  550 (1688)
T ss_dssp             CCCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHH
T ss_pred             ccccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHH
Confidence            46789999999999998 9999999999999999986678776666666665322    557889999999999999999


Q ss_pred             HHHHHh-----cC-CccEEEEccCCCCCC-cccCCC--HHHHHHHHHHHhHHHHHHHHHH--HHHHHhCCCCeEEEEcCC
Q 024338           96 KTAVDA-----WG-TVDILINNAGITRDT-LLMRMK--KSQWQDVIDLNLTGVFLCTQAA--AKIMMKKKKGRIINIASV  164 (269)
Q Consensus        96 ~~~~~~-----~~-~id~li~~ag~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~~--~~~l~~~~~~~iv~isS~  164 (269)
                      +++.+.     +| ++|+||||||+.... ++.+.+  .++|++.+++|+.+++.+++.+  +|.|.+++.|+||++||.
T Consensus       551 e~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSi  630 (1688)
T 2pff_A          551 EFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPN  630 (1688)
T ss_dssp             HHHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSC
T ss_pred             HHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEECh
Confidence            999998     77 999999999987776 788888  8999999999999999999998  788877767899999999


Q ss_pred             ccccCCCCChhhHHhHHHHHHH-HHHHHHHhccCCeEEEEEecCCcc-CCcccccChHHHHHHHhcCCCCCCCCHHHHHH
Q 024338          165 VGLVGNIGQANYSAAKAGVIGL-TKTVAKEYASRNINVNAIAPGFIA-SDMTAKLGEDLEKKILEKIPLGRYGQPEEVAG  242 (269)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~al~~~-~~~la~e~~~~gi~v~~v~pG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~  242 (269)
                      .+..+  +...|++||+++++| .+.++.++++. |+||+|+||+++ |++....  ..........+. +..+|+|+|+
T Consensus       631 AG~~G--g~saYaASKAAL~aLttrsLAeEla~~-IRVNaVaPG~V~TT~M~~~~--e~~~~~l~~ipl-R~~sPEEVA~  704 (1688)
T 2pff_A          631 HGTFG--GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSAN--NIIAEGIEKMGV-RTFSQKEMAF  704 (1688)
T ss_dssp             TTTSS--CBTTHHHHHHHHTHHHHHTTTSSCTTT-EECCCCCCCCCCCCSSSCTT--TTCSTTTSSSSC-CCCCCCTTHH
T ss_pred             HhccC--CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEECcCcCCcccCCc--hHHHHHHHhCCC-CCCCHHHHHH
Confidence            99887  778999999999999 78888888877 999999999999 7875431  100111223343 3458999999


Q ss_pred             HHHHhccCCCCCCccccEEEec--CCcc
Q 024338          243 LVEFLALNPAAGYITGQVLTID--GGMV  268 (269)
Q Consensus       243 ~~~~l~~~~~~~~~~G~~i~~d--gg~~  268 (269)
                      +++||++++.+++++|+.|.+|  ||+.
T Consensus       705 aIlFLaSd~sAs~ITGq~I~VDVDGG~~  732 (1688)
T 2pff_A          705 NLLGLLTPEVVELCQKSPVMADLNGGLQ  732 (1688)
T ss_dssp             HHHHHTSTTHHHHHTTSCCCCCCSCSGG
T ss_pred             HHHHHhCCCccccccCcEEEEEcCCCee
Confidence            9999995432678999999876  9974

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=100.00  E-value=1.2e-34  Score=234.15  Aligned_cols=200  Identities=19%  Similarity=0.212  Sum_probs=175.2

Q ss_pred             CC-EEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           26 AP-VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        26 ~k-~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      || ++|||||+++||++++++|+ +|++|+++ +|+.+                 .+.+|++|.++++++++++    ++
T Consensus         2 ~kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~-~r~~~-----------------~~~~D~~~~~~~~~~~~~~----~~   58 (202)
T 3d7l_A            2 NAMKILLIGASGTLGSAVKERLE-KKAEVITA-GRHSG-----------------DVTVDITNIDSIKKMYEQV----GK   58 (202)
T ss_dssp             CSCEEEEETTTSHHHHHHHHHHT-TTSEEEEE-ESSSS-----------------SEECCTTCHHHHHHHHHHH----CC
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHH-CCCeEEEE-ecCcc-----------------ceeeecCCHHHHHHHHHHh----CC
Confidence            45 79999999999999999999 99999885 66543                 4789999999999988765    78


Q ss_pred             ccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHHH
Q 024338          105 VDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVI  184 (269)
Q Consensus       105 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~  184 (269)
                      +|+||||||.....++.+.+.+++++.+++|+.+++.+++++.|.|.+  +++||++||..+..+.++...|+.+|++++
T Consensus        59 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~  136 (202)
T 3d7l_A           59 VDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLND--KGSFTLTTGIMMEDPIVQGASAAMANGAVT  136 (202)
T ss_dssp             EEEEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEE--EEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhcc--CCEEEEEcchhhcCCCCccHHHHHHHHHHH
Confidence            999999999877777888999999999999999999999999998843  489999999999999999999999999999


Q ss_pred             HHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEEEec
Q 024338          185 GLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTID  264 (269)
Q Consensus       185 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~d  264 (269)
                      .++++++.|+ +.||+++.++||+++|++..         .....+.+.+.+|+|+|+++++++.    .+.+|++|++|
T Consensus       137 ~~~~~~~~e~-~~gi~v~~v~pg~v~~~~~~---------~~~~~~~~~~~~~~dva~~~~~~~~----~~~~G~~~~vd  202 (202)
T 3d7l_A          137 AFAKSAAIEM-PRGIRINTVSPNVLEESWDK---------LEPFFEGFLPVPAAKVARAFEKSVF----GAQTGESYQVY  202 (202)
T ss_dssp             HHHHHHTTSC-STTCEEEEEEECCBGGGHHH---------HGGGSTTCCCBCHHHHHHHHHHHHH----SCCCSCEEEEC
T ss_pred             HHHHHHHHHc-cCCeEEEEEecCccCCchhh---------hhhhccccCCCCHHHHHHHHHHhhh----ccccCceEecC
Confidence            9999999998 78999999999999998632         1223455667899999999998873    36899999987

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=100.00  E-value=7e-35  Score=243.24  Aligned_cols=217  Identities=26%  Similarity=0.403  Sum_probs=177.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCcc
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVD  106 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id  106 (269)
                      |++|||||+++||++++++|+++|++|+++ .|+.+..+.             .+.+|++|.++++++++++   .+++|
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~-------------~~~~D~~~~~~~~~~~~~~---~~~~d   64 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGI-DRGQADIEA-------------DLSTPGGRETAVAAVLDRC---GGVLD   64 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ESSSSSEEC-------------CTTSHHHHHHHHHHHHHHH---TTCCS
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEE-eCChhHccc-------------cccCCcccHHHHHHHHHHc---CCCcc
Confidence            689999999999999999999999999885 665432210             1678999999998888754   36899


Q ss_pred             EEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCC----------------
Q 024338          107 ILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGN----------------  170 (269)
Q Consensus       107 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~----------------  170 (269)
                      +||||||....       .+.++..+++|+.+++.+++++++.|.+++.++||++||..+..+.                
T Consensus        65 ~vi~~Ag~~~~-------~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~  137 (255)
T 2dkn_A           65 GLVCCAGVGVT-------AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEA  137 (255)
T ss_dssp             EEEECCCCCTT-------SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHH
T ss_pred             EEEECCCCCCc-------chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchh
Confidence            99999997542       1248899999999999999999999987777999999999888665                


Q ss_pred             ----------CCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC-hHHHHHHHhcC--CCCCCCCH
Q 024338          171 ----------IGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG-EDLEKKILEKI--PLGRYGQP  237 (269)
Q Consensus       171 ----------~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~-~~~~~~~~~~~--~~~~~~~~  237 (269)
                                ++...|+.||++++.+++.++.++.+.||++++++||++.|++..... ...........  +.+++.++
T Consensus       138 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (255)
T 2dkn_A          138 RAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRYGESTRRFVAPLGRGSEP  217 (255)
T ss_dssp             HHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHCTTTHHHHHSCCCTTSSCBCH
T ss_pred             hhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccchhhHHHHHHHHHHhcCCCCH
Confidence                      566789999999999999999999988999999999999999754321 11111222222  66778899


Q ss_pred             HHHHHHHHHhccCCCCCCccccEEEecCCcc
Q 024338          238 EEVAGLVEFLALNPAAGYITGQVLTIDGGMV  268 (269)
Q Consensus       238 ~~~a~~~~~l~~~~~~~~~~G~~i~~dgg~~  268 (269)
                      +|+|++++++++ +...+++|+++.+|||..
T Consensus       218 ~dva~~~~~l~~-~~~~~~~G~~~~v~gg~~  247 (255)
T 2dkn_A          218 REVAEAIAFLLG-PQASFIHGSVLFVDGGMD  247 (255)
T ss_dssp             HHHHHHHHHHHS-GGGTTCCSCEEEESTTHH
T ss_pred             HHHHHHHHHHhC-CCcccceeeEEEecCCeE
Confidence            999999999995 455679999999999964

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=100.00  E-value=7.9e-34  Score=229.97  Aligned_cols=200  Identities=20%  Similarity=0.255  Sum_probs=171.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCcc
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVD  106 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id  106 (269)
                      |++|||||++|||++++++|+++  +|++ ..|+++..+++.+++.   .  .++.+|++|.+++++++++    ++++|
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~-~~r~~~~~~~~~~~~~---~--~~~~~D~~~~~~~~~~~~~----~~~id   68 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLL-SGRRAGALAELAREVG---A--RALPADLADELEAKALLEE----AGPLD   68 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEE-ECSCHHHHHHHHHHHT---C--EECCCCTTSHHHHHHHHHH----HCSEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEE-EECCHHHHHHHHHhcc---C--cEEEeeCCCHHHHHHHHHh----cCCCC
Confidence            68999999999999999999998  7777 5888887777766653   2  7889999999999999887    68999


Q ss_pred             EEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHHHHH
Q 024338          107 ILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGL  186 (269)
Q Consensus       107 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~~  186 (269)
                      +||||||.....++.+.+.+++++.+++|+.+++.+++++    .+++.++||++||..+..+.++...|+++|++++.+
T Consensus        69 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~  144 (207)
T 2yut_A           69 LLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHA----RFQKGARAVFFGAYPRYVQVPGFAAYAAAKGALEAY  144 (207)
T ss_dssp             EEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHC----CEEEEEEEEEECCCHHHHSSTTBHHHHHHHHHHHHH
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH----HhcCCcEEEEEcChhhccCCCCcchHHHHHHHHHHH
Confidence            9999999887777888899999999999999999999988    334568999999999999999999999999999999


Q ss_pred             HHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCC
Q 024338          187 TKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPA  252 (269)
Q Consensus       187 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~  252 (269)
                      +++++.|+++.||+++.++||++.|++....          ..+.+++.+|+|+|++++++++.+.
T Consensus       145 ~~~~~~~~~~~gi~v~~v~pg~v~t~~~~~~----------~~~~~~~~~~~dva~~~~~~~~~~~  200 (207)
T 2yut_A          145 LEAARKELLREGVHLVLVRLPAVATGLWAPL----------GGPPKGALSPEEAARKVLEGLFREP  200 (207)
T ss_dssp             HHHHHHHHHTTTCEEEEECCCCBCSGGGGGG----------TSCCTTCBCHHHHHHHHHHHHC--C
T ss_pred             HHHHHHHHhhhCCEEEEEecCcccCCCcccc----------CCCCCCCCCHHHHHHHHHHHHhCCC
Confidence            9999999999999999999999999974321          2345678899999999999996544

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=100.00  E-value=1.2e-33  Score=258.45  Aligned_cols=218  Identities=14%  Similarity=0.133  Sum_probs=184.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEe-cCC-------------HHHHHHHHHHHHHcCCcEEEEEccCCCHHH
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNY-ARS-------------SKEAEEVCKEIEASGGQALTFGGDVSKEAD   90 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~-~r~-------------~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~   90 (269)
                      ++|++|||||++|||.++|++|+++|+++++++ +|+             .+..+++.+++.+.+.++.++.||++|.++
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~  329 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEA  329 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHH
Confidence            679999999999999999999999999977767 777             355667788888888899999999999999


Q ss_pred             HHHHHHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCeEEEEcCCccccC
Q 024338           91 VESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK-KGRIINIASVVGLVG  169 (269)
Q Consensus        91 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~  169 (269)
                      ++++++++. ++++||+||||||+.....+.+.+.+++++.+++|+.+++++.+.+.+.+.+++ .++||++||+.+..+
T Consensus       330 v~~~~~~i~-~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g  408 (525)
T 3qp9_A          330 AARLLAGVS-DAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWG  408 (525)
T ss_dssp             HHHHHHTSC-TTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTC
T ss_pred             HHHHHHHHH-hcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCC
Confidence            999999998 789999999999998888899999999999999999999999999999987665 789999999999999


Q ss_pred             CCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhcc
Q 024338          170 NIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLAL  249 (269)
Q Consensus       170 ~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~  249 (269)
                      .+++..|+++|+++++|    +.+++..||++++|+||+++|+|....  .....+ ....+ ...+|+++++.+.+++.
T Consensus       409 ~~g~~~YaaaKa~l~~l----A~~~~~~gi~v~sI~pG~~~tgm~~~~--~~~~~~-~~~g~-~~l~pee~a~~l~~~l~  480 (525)
T 3qp9_A          409 GAGQGAYAAGTAFLDAL----AGQHRADGPTVTSVAWSPWEGSRVTEG--ATGERL-RRLGL-RPLAPATALTALDTALG  480 (525)
T ss_dssp             CTTCHHHHHHHHHHHHH----HTSCCSSCCEEEEEEECCBTTSGGGSS--HHHHHH-HHTTB-CCBCHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHH----HHHHHhCCCCEEEEECCccccccccch--hhHHHH-HhcCC-CCCCHHHHHHHHHHHHh
Confidence            99999999999988877    456778899999999999999987432  111122 12221 23489999999999986


Q ss_pred             CC
Q 024338          250 NP  251 (269)
Q Consensus       250 ~~  251 (269)
                      .+
T Consensus       481 ~~  482 (525)
T 3qp9_A          481 HG  482 (525)
T ss_dssp             HT
T ss_pred             CC
Confidence            54

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.97  E-value=3e-31  Score=253.13  Aligned_cols=217  Identities=21%  Similarity=0.269  Sum_probs=180.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHH-HcCCcEEEEecCC---HHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           25 EAPVAVVTGASRGIGRAVATSLG-KAGCKVLVNYARS---SKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~-~~G~~v~i~~~r~---~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      .+|++|||||++|||+++|++|+ ++|++.+++.+|+   .+..+++.+++++.+.++.++.||++|.++++++++++.+
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~  608 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPD  608 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            57999999999999999999999 7999744446787   4456778888888889999999999999999999999987


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhH
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                      .+ +||+||||||+....++.+++.++|++.+++|+.|++++.+++.|.|      +||++||+.+..+.+++..|+++|
T Consensus       609 ~~-~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l------~iV~~SS~ag~~g~~g~~~YaAak  681 (795)
T 3slk_A          609 EH-PLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPDV------ALVLFSSVSGVLGSGGQGNYAAAN  681 (795)
T ss_dssp             TS-CEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS------EEEEEEETHHHHTCSSCHHHHHHH
T ss_pred             hC-CCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC------EEEEEccHHhcCCCCCCHHHHHHH
Confidence            76 99999999999988899999999999999999999999999997766      899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCC
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAA  253 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~  253 (269)
                      +    |+++|+.++++.||++++|+||++.|+.+.....+..........+..+ ++++....+...+.+++.
T Consensus       682 a----~~~alA~~~~~~Gi~v~sI~pG~v~t~g~~~~~~~~~~~~~~~~g~~~l-~~~e~~~~~~~~l~~~~~  749 (795)
T 3slk_A          682 S----FLDALAQQRQSRGLPTRSLAWGPWAEHGMASTLREAEQDRLARSGLLPI-STEEGLSQFDAACGGAHT  749 (795)
T ss_dssp             H----HHHHHHHHHHHTTCCEEEEEECCCSCCCHHHHHHHHHHHHHHHTTBCCC-CHHHHHHHHHHHHTSSCS
T ss_pred             H----HHHHHHHHHHHcCCeEEEEECCeECcchhhccccHHHHHHHHhcCCCCC-CHHHHHHHHHHHHhCCCc
Confidence            6    7788888888899999999999999986543222222222233333333 567777766666655544

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.97  E-value=9.4e-31  Score=237.02  Aligned_cols=215  Identities=20%  Similarity=0.251  Sum_probs=174.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCH---HHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSS---KEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~---~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      +|++|||||++|||.+++++|+++|+..+++++|+.   +..+++.+++.+.+.++.++.||++|.++++++++++.+. 
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~-  317 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPED-  317 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTT-
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHh-
Confidence            499999999999999999999999995555467753   3466778888888889999999999999999999998776 


Q ss_pred             CCccEEEEccCCC-CCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHH
Q 024338          103 GTVDILINNAGIT-RDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKA  181 (269)
Q Consensus       103 ~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  181 (269)
                      +++|+||||||+. ...++.+.+.+++++.+++|+.+++++.+.+.+    ...++||++||+.+..+.+++..|+++|+
T Consensus       318 g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~----~~~~~iV~~SS~a~~~g~~g~~~YaAaKa  393 (496)
T 3mje_A          318 APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTAD----LDLDAFVLFSSGAAVWGSGGQPGYAAANA  393 (496)
T ss_dssp             SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTT----SCCSEEEEEEEHHHHTTCTTCHHHHHHHH
T ss_pred             CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhc----cCCCEEEEEeChHhcCCCCCcHHHHHHHH
Confidence            7899999999997 677899999999999999999999998887654    46789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCC
Q 024338          182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPA  252 (269)
Q Consensus       182 al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~  252 (269)
                      ++++|++.    ++..||++++|+||++.++.+..... ..+.+.. ..+ ...+|+++++.+.+++..++
T Consensus       394 ~ldala~~----~~~~Gi~v~sV~pG~w~~~gm~~~~~-~~~~l~~-~g~-~~l~pe~~~~~l~~~l~~~~  457 (496)
T 3mje_A          394 YLDALAEH----RRSLGLTASSVAWGTWGEVGMATDPE-VHDRLVR-QGV-LAMEPEHALGALDQMLENDD  457 (496)
T ss_dssp             HHHHHHHH----HHHTTCCCEEEEECEESSSCC-------CHHHHH-TTE-EEECHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHH----HHhcCCeEEEEECCcccCCccccChH-HHHHHHh-cCC-CCCCHHHHHHHHHHHHcCCC
Confidence            88888764    44569999999999998765432211 1111111 111 12379999999999886543

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.97  E-value=3.5e-31  Score=275.35  Aligned_cols=240  Identities=17%  Similarity=0.211  Sum_probs=180.5

Q ss_pred             cCCCCCCEEEEeCCCCc-hHHHHHHHHHHcCCcEEEEecCCHHH-----HHHHHHHHHHcCCcEEEEEccCCCHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRG-IGRAVATSLGKAGCKVLVNYARSSKE-----AEEVCKEIEASGGQALTFGGDVSKEADVESM   94 (269)
Q Consensus        21 ~~~~~~k~vlItGas~g-iG~~~a~~l~~~G~~v~i~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~   94 (269)
                      ...++||++|||||++| ||+++|+.|+++|++|+++ .|+.+.     ++++.+++...+.++..+.+|++|.++++++
T Consensus      2131 ~~~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~-~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~l 2209 (3089)
T 3zen_D         2131 XXXXXDEVAVVTGASKGSIAASVVGQLLDGGATVIAT-TSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKL 2209 (3089)
T ss_dssp             TCCCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEE-ESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHH
T ss_pred             cccCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEE-eCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHH
Confidence            34589999999999999 9999999999999999995 555444     5556666655567888999999999999999


Q ss_pred             HHHHHH----hcCCccEEEEccCCC----CC-CcccCCCHH----HHHHHHHHHhHHHHHHHHHHHHHHHhCCCC----e
Q 024338           95 IKTAVD----AWGTVDILINNAGIT----RD-TLLMRMKKS----QWQDVIDLNLTGVFLCTQAAAKIMMKKKKG----R  157 (269)
Q Consensus        95 ~~~~~~----~~~~id~li~~ag~~----~~-~~~~~~~~~----~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~----~  157 (269)
                      ++++.+    .+|++|+||||||+.    .. ....+.+.+    .++..+++|+.+.+.+++.+.+.|..++.+    .
T Consensus      2210 v~~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~i 2289 (3089)
T 3zen_D         2210 VEWVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHV 2289 (3089)
T ss_dssp             HHHHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEE
T ss_pred             HHHHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEE
Confidence            999998    899999999999971    11 122222333    345569999999999999999999776532    2


Q ss_pred             EEEEcCCccccCCCCChhhHHhHHHHHHHHHHHHHH--hccCCeEEEEEecCCcc-CCcccccChHHHHHHHhcCCCCCC
Q 024338          158 IINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKE--YASRNINVNAIAPGFIA-SDMTAKLGEDLEKKILEKIPLGRY  234 (269)
Q Consensus       158 iv~isS~~~~~~~~~~~~Y~~sK~al~~~~~~la~e--~~~~gi~v~~v~pG~v~-t~~~~~~~~~~~~~~~~~~~~~~~  234 (269)
                      +++.|+..+.  .++...|++||+|+.+|+++++.|  +++ +|+||+++||+++ |++......  ........+.+. 
T Consensus      2290 i~~~ss~~g~--~g~~~aYsASKaAl~~LtrslA~E~~~a~-~IrVn~v~PG~v~tT~l~~~~~~--~~~~~~~~~~r~- 2363 (3089)
T 3zen_D         2290 VLPGSPNRGM--FGGDGAYGEAKSALDALENRWSAEKSWAE-RVSLAHALIGWTKGTGLMGQNDA--IVSAVEEAGVTT- 2363 (3089)
T ss_dssp             EEEECSSTTS--CSSCSSHHHHGGGHHHHHHHHHHCSTTTT-TEEEEEEECCCEECSTTTTTTTT--THHHHGGGSCBC-
T ss_pred             EEECCccccc--CCCchHHHHHHHHHHHHHHHHHhccccCC-CeEEEEEeecccCCCcccccchh--HHHHHHhcCCCC-
Confidence            3444444333  235668999999999999999999  665 6999999999999 666543211  122223344443 


Q ss_pred             CCHHHHHHHHHHhccCCCCCCccccEEEec--CCc
Q 024338          235 GQPEEVAGLVEFLALNPAAGYITGQVLTID--GGM  267 (269)
Q Consensus       235 ~~~~~~a~~~~~l~~~~~~~~~~G~~i~~d--gg~  267 (269)
                      .+|+|+|++++||++.......+|+.+.+|  ||+
T Consensus      2364 ~~PeEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~ 2398 (3089)
T 3zen_D         2364 YTTDEMAAMLLDLCTVETKVAAAGAPVKVDLTGGL 2398 (3089)
T ss_dssp             EEHHHHHHHHHHTTSHHHHHHHHHSCEEEECSBSC
T ss_pred             CCHHHHHHHHHHHhChhhhhHhcCCeEEEEcCCCc
Confidence            389999999999995433344566767766  887

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.96  E-value=9.5e-28  Score=218.65  Aligned_cols=210  Identities=23%  Similarity=0.318  Sum_probs=172.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHH---HHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSK---EAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~---~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      .+|++|||||++|||.+++++|+++|+..+++.+|+..   ..+++.+++...+.++.++.||++|.+++++++++    
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~----  333 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTA----  333 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHH----
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhc----
Confidence            57999999999999999999999999964443577653   45667778877788899999999999999999886    


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKA  181 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  181 (269)
                       +++|+||||||+.....+.+.+.+++++.+++|+.+++++.+.+.+.   .+.++||++||+.+..+.+++..|+++|+
T Consensus       334 -~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~---~~~~~~V~~SS~a~~~g~~g~~~YaaaKa  409 (511)
T 2z5l_A          334 -YPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADI---KGLDAFVLFSSVTGTWGNAGQGAYAAANA  409 (511)
T ss_dssp             -SCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSC---TTCCCEEEEEEGGGTTCCTTBHHHHHHHH
T ss_pred             -CCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhc---cCCCEEEEEeCHHhcCCCCCCHHHHHHHH
Confidence             68999999999988888889999999999999999999998876431   25689999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCeEEEEEecCCc-cCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCC
Q 024338          182 GVIGLTKTVAKEYASRNINVNAIAPGFI-ASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNP  251 (269)
Q Consensus       182 al~~~~~~la~e~~~~gi~v~~v~pG~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~  251 (269)
                      +++.|++.+    ...|+++++|+||++ +|++.........  ...+.   ...+++++++.+..++..+
T Consensus       410 ~ld~la~~~----~~~gi~v~sv~pG~~~~tgm~~~~~~~~~--~~~g~---~~l~~e~~a~~l~~al~~~  471 (511)
T 2z5l_A          410 ALDALAERR----RAAGLPATSVAWGLWGGGGMAAGAGEESL--SRRGL---RAMDPDAAVDALLGAMGRN  471 (511)
T ss_dssp             HHHHHHHHH----HTTTCCCEEEEECCBCSTTCCCCHHHHHH--HHHTB---CCBCHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHH----HHcCCcEEEEECCcccCCcccccccHHHH--HhcCC---CCCCHHHHHHHHHHHHhCC
Confidence            999888754    456999999999999 7777654211111  11121   2458999999999998654

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.96  E-value=2.2e-28  Score=221.91  Aligned_cols=213  Identities=18%  Similarity=0.214  Sum_probs=171.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCc-EEEEecCCHH---HHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCK-VLVNYARSSK---EAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~-v~i~~~r~~~---~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      .++++|||||++|||.+++++|+++|+. |++ ++|+.+   ..+++.+++...+.++.++.||++|.++++++++++ .
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl-~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i-~  302 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLL-VSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI-G  302 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEE-EESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS-C
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEE-EcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHH-H
Confidence            5799999999999999999999999997 555 577654   456677778777889999999999999999999998 5


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhH
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                      .++++|+||||||......+.+.+.+++++.+++|+.+++++.+.+.+    .+.++||++||..+..+.+++..|+++|
T Consensus       303 ~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~----~~~~~~V~~SS~a~~~g~~g~~~Yaaak  378 (486)
T 2fr1_A          303 DDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRE----LDLTAFVLFSSFASAFGAPGLGGYAPGN  378 (486)
T ss_dssp             TTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTT----SCCSEEEEEEEHHHHTCCTTCTTTHHHH
T ss_pred             hcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCc----CCCCEEEEEcChHhcCCCCCCHHHHHHH
Confidence            668999999999998888888999999999999999999999887643    4678999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCC-cccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCC
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASD-MTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPA  252 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~  252 (269)
                      ++++.|++.    +...|+++++|+||++.++ +....   .... ..... ....+++++++.+..++..+.
T Consensus       379 a~l~~la~~----~~~~gi~v~~i~pG~~~~~gm~~~~---~~~~-~~~~g-~~~i~~e~~a~~l~~~l~~~~  442 (486)
T 2fr1_A          379 AYLDGLAQQ----RRSDGLPATAVAWGTWAGSGMAEGP---VADR-FRRHG-VIEMPPETACRALQNALDRAE  442 (486)
T ss_dssp             HHHHHHHHH----HHHTTCCCEEEEECCBC----------------CTTTT-EECBCHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHH----HHhcCCeEEEEECCeeCCCcccchh---HHHH-HHhcC-CCCCCHHHHHHHHHHHHhCCC
Confidence            988887654    4456999999999999886 32211   0011 01000 124589999999999986543

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.95  E-value=8.4e-28  Score=198.54  Aligned_cols=208  Identities=17%  Similarity=0.182  Sum_probs=156.3

Q ss_pred             ccccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcE-EEEEccCCCHHHHHHHHH
Q 024338           18 NEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQA-LTFGGDVSKEADVESMIK   96 (269)
Q Consensus        18 ~~~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~-~~~~~Dls~~~~~~~~~~   96 (269)
                      ......+++|++|||||+|+||++++++|+++|++|+++ .|+++..+++.+      ..+ .++.+|++         +
T Consensus        13 ~~~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~-~R~~~~~~~~~~------~~~~~~~~~Dl~---------~   76 (236)
T 3e8x_A           13 GRENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAM-VRNEEQGPELRE------RGASDIVVANLE---------E   76 (236)
T ss_dssp             --------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ESSGGGHHHHHH------TTCSEEEECCTT---------S
T ss_pred             cccccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEE-ECChHHHHHHHh------CCCceEEEcccH---------H
Confidence            334467899999999999999999999999999999885 777766654432      256 78999999         3


Q ss_pred             HHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCC---CCC
Q 024338           97 TAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGN---IGQ  173 (269)
Q Consensus        97 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~---~~~  173 (269)
                      ++.+.++++|+||||||....        +++++.+++|+.++..+++++..    .+.++||++||..+..+.   +..
T Consensus        77 ~~~~~~~~~D~vi~~ag~~~~--------~~~~~~~~~n~~~~~~l~~a~~~----~~~~~iv~~SS~~~~~~~~~~~~~  144 (236)
T 3e8x_A           77 DFSHAFASIDAVVFAAGSGPH--------TGADKTILIDLWGAIKTIQEAEK----RGIKRFIMVSSVGTVDPDQGPMNM  144 (236)
T ss_dssp             CCGGGGTTCSEEEECCCCCTT--------SCHHHHHHTTTHHHHHHHHHHHH----HTCCEEEEECCTTCSCGGGSCGGG
T ss_pred             HHHHHHcCCCEEEECCCCCCC--------CCccccchhhHHHHHHHHHHHHH----cCCCEEEEEecCCCCCCCCChhhh
Confidence            444555689999999997542        35789999999999999888843    456899999998777654   467


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCC
Q 024338          174 ANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAA  253 (269)
Q Consensus       174 ~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~  253 (269)
                      ..|+.+|++++.+.+       ..|++++.++||++.++.........    ........+.+++|+|++++++++.+. 
T Consensus       145 ~~Y~~sK~~~e~~~~-------~~gi~~~~lrpg~v~~~~~~~~~~~~----~~~~~~~~~i~~~Dva~~~~~~~~~~~-  212 (236)
T 3e8x_A          145 RHYLVAKRLADDELK-------RSSLDYTIVRPGPLSNEESTGKVTVS----PHFSEITRSITRHDVAKVIAELVDQQH-  212 (236)
T ss_dssp             HHHHHHHHHHHHHHH-------HSSSEEEEEEECSEECSCCCSEEEEE----SSCSCCCCCEEHHHHHHHHHHHTTCGG-
T ss_pred             hhHHHHHHHHHHHHH-------HCCCCEEEEeCCcccCCCCCCeEEec----cCCCcccCcEeHHHHHHHHHHHhcCcc-
Confidence            899999999998865       46899999999999998643221100    011122456689999999999996542 


Q ss_pred             CCccccEEEecCCc
Q 024338          254 GYITGQVLTIDGGM  267 (269)
Q Consensus       254 ~~~~G~~i~~dgg~  267 (269)
                        ..|+++.+++|.
T Consensus       213 --~~g~~~~v~~~~  224 (236)
T 3e8x_A          213 --TIGKTFEVLNGD  224 (236)
T ss_dssp             --GTTEEEEEEECS
T ss_pred             --ccCCeEEEeCCC
Confidence              679999998763

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.94  E-value=4.8e-26  Score=191.56  Aligned_cols=184  Identities=16%  Similarity=0.207  Sum_probs=150.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      ++|++|||||+|+||++++++|+++|++|+++ .|++....         +.++.++.+|++|.++++++++       +
T Consensus         2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~-~r~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~-------~   64 (267)
T 3rft_A            2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLA-DLSPLDPA---------GPNEECVQCDLADANAVNAMVA-------G   64 (267)
T ss_dssp             CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEE-ESSCCCCC---------CTTEEEEECCTTCHHHHHHHHT-------T
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEE-ecCCcccc---------CCCCEEEEcCCCCHHHHHHHHc-------C
Confidence            46899999999999999999999999999885 56543221         4578899999999999998887       7


Q ss_pred             ccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccc------------cCCCC
Q 024338          105 VDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGL------------VGNIG  172 (269)
Q Consensus       105 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~------------~~~~~  172 (269)
                      +|+||||||...        .+.+++.+++|+.+++.+++++.+    ++.++||++||..++            .+.++
T Consensus        65 ~D~vi~~Ag~~~--------~~~~~~~~~~N~~g~~~l~~a~~~----~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~  132 (267)
T 3rft_A           65 CDGIVHLGGISV--------EKPFEQILQGNIIGLYNLYEAARA----HGQPRIVFASSNHTIGYYPQTERLGPDVPARP  132 (267)
T ss_dssp             CSEEEECCSCCS--------CCCHHHHHHHHTHHHHHHHHHHHH----TTCCEEEEEEEGGGGTTSBTTSCBCTTSCCCC
T ss_pred             CCEEEECCCCcC--------cCCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEcchHHhCCCCCCCCCCCCCCCCC
Confidence            999999999843        235789999999999999999843    567899999998876            34456


Q ss_pred             ChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCC
Q 024338          173 QANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPA  252 (269)
Q Consensus       173 ~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~  252 (269)
                      ...|+.||++.+.+++.++.++   |++++.|.||.+.++......   .         ..+.+++++++.+..++..++
T Consensus       133 ~~~Y~~sK~~~e~~~~~~a~~~---g~~~~~vr~~~v~~~~~~~~~---~---------~~~~~~~d~a~~~~~~~~~~~  197 (267)
T 3rft_A          133 DGLYGVSKCFGENLARMYFDKF---GQETALVRIGSCTPEPNNYRM---L---------STWFSHDDFVSLIEAVFRAPV  197 (267)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECBCSSSCCSTTH---H---------HHBCCHHHHHHHHHHHHHCSC
T ss_pred             CChHHHHHHHHHHHHHHHHHHh---CCeEEEEEeecccCCCCCCCc---e---------eeEEcHHHHHHHHHHHHhCCC
Confidence            6889999999999999998876   789999999999887543211   1         013479999999999986543

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.94  E-value=1.1e-25  Score=195.12  Aligned_cols=224  Identities=20%  Similarity=0.182  Sum_probs=169.5

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHc-CCcEEEE-EccCCCHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS-GGQALTF-GGDVSKEADVESMIKTA   98 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~-~~~~~~~-~~Dls~~~~~~~~~~~~   98 (269)
                      ...+++|++|||||+|+||.+++++|+++|++|+++ .|+.+..+.+.+.+... +.++.++ .+|++|.++++++++  
T Consensus         6 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--   82 (342)
T 1y1p_A            6 AVLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGT-ARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK--   82 (342)
T ss_dssp             CSSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT--
T ss_pred             ccCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEE-eCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHc--
Confidence            445788999999999999999999999999999884 77777666665555432 3578888 899999888777664  


Q ss_pred             HHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcccc-CC-------
Q 024338           99 VDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLV-GN-------  170 (269)
Q Consensus        99 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~-~~-------  170 (269)
                           ++|+||||||.....       +++++.+++|+.++..+++++.+   ..+.+++|++||...+. +.       
T Consensus        83 -----~~d~vih~A~~~~~~-------~~~~~~~~~n~~g~~~ll~~~~~---~~~~~~iv~~SS~~~~~~~~~~~~~~~  147 (342)
T 1y1p_A           83 -----GAAGVAHIASVVSFS-------NKYDEVVTPAIGGTLNALRAAAA---TPSVKRFVLTSSTVSALIPKPNVEGIY  147 (342)
T ss_dssp             -----TCSEEEECCCCCSCC-------SCHHHHHHHHHHHHHHHHHHHHT---CTTCCEEEEECCGGGTCCCCTTCCCCE
T ss_pred             -----CCCEEEEeCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHh---CCCCcEEEEeccHHHhcCCCCCCCCcc
Confidence                 799999999975432       24577999999999999988864   23458999999987652 21       


Q ss_pred             -----------------------CCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC-----hHHH
Q 024338          171 -----------------------IGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG-----EDLE  222 (269)
Q Consensus       171 -----------------------~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~-----~~~~  222 (269)
                                             .+...|+.||.+.+.+++.++.++.. ++++++++||.+.++......     ..+.
T Consensus       148 ~~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~-~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~  226 (342)
T 1y1p_A          148 LDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKP-HFTLNAVLPNYTIGTIFDPETQSGSTSGWM  226 (342)
T ss_dssp             ECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCC-SSEEEEEEESEEECCCSCTTTCCCHHHHHH
T ss_pred             cCccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCC-CceEEEEcCCceECCCCCCCCCCccHHHHH
Confidence                                   12357999999999999999999876 899999999999998754321     2222


Q ss_pred             HHHHhcC--------CCCCCCCHHHHHHHHHHhccCCCCCCccccEEEecCC
Q 024338          223 KKILEKI--------PLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGG  266 (269)
Q Consensus       223 ~~~~~~~--------~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg  266 (269)
                      .....+.        +.+.+.+++|+|++++.++..+   ..+|+.+..+|+
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~---~~~g~~~~~~g~  275 (342)
T 1y1p_A          227 MSLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVLP---QIERRRVYGTAG  275 (342)
T ss_dssp             HHHHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHCT---TCCSCEEEECCE
T ss_pred             HHHHcCCCccccccCCcCCEeEHHHHHHHHHHHHcCc---ccCCceEEEeCC
Confidence            2222221        2334568999999999998543   356777666665

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.94  E-value=2.2e-25  Score=194.20  Aligned_cols=219  Identities=16%  Similarity=0.167  Sum_probs=170.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHc-CC-cEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKA-GC-KVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAV   99 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~-G~-~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~   99 (269)
                      ..+++|++|||||+|+||.+++++|+++ |+ +|++ .+|++....++.+++.  ..++.++.+|++|.+++.++++   
T Consensus        17 ~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~-~~r~~~~~~~~~~~~~--~~~v~~~~~Dl~d~~~l~~~~~---   90 (344)
T 2gn4_A           17 NMLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIV-YSRDELKQSEMAMEFN--DPRMRFFIGDVRDLERLNYALE---   90 (344)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEE-EESCHHHHHHHHHHHC--CTTEEEEECCTTCHHHHHHHTT---
T ss_pred             HhhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEE-EECChhhHHHHHHHhc--CCCEEEEECCCCCHHHHHHHHh---
Confidence            3468999999999999999999999999 98 7777 5888877766666553  3578899999999998887765   


Q ss_pred             HhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHh
Q 024338          100 DAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAA  179 (269)
Q Consensus       100 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  179 (269)
                          ++|+|||+||..... .   ......+.+++|+.++.++++++.+    .+.+++|++||..+..|   ...|+.|
T Consensus        91 ----~~D~Vih~Aa~~~~~-~---~~~~~~~~~~~Nv~gt~~l~~aa~~----~~v~~~V~~SS~~~~~p---~~~Y~~s  155 (344)
T 2gn4_A           91 ----GVDICIHAAALKHVP-I---AEYNPLECIKTNIMGASNVINACLK----NAISQVIALSTDKAANP---INLYGAT  155 (344)
T ss_dssp             ----TCSEEEECCCCCCHH-H---HHHSHHHHHHHHHHHHHHHHHHHHH----TTCSEEEEECCGGGSSC---CSHHHHH
T ss_pred             ----cCCEEEECCCCCCCC-c---hhcCHHHHHHHHHHHHHHHHHHHHh----CCCCEEEEecCCccCCC---ccHHHHH
Confidence                799999999975421 1   1234568999999999999999876    45689999999876543   5789999


Q ss_pred             HHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcC-C--------CCCCCCHHHHHHHHHHhccC
Q 024338          180 KAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKI-P--------LGRYGQPEEVAGLVEFLALN  250 (269)
Q Consensus       180 K~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~-~--------~~~~~~~~~~a~~~~~l~~~  250 (269)
                      |++.+.++++++.++.+.|+++++++||.+.++... ..+.+......+. +        .+.+.+++|+|+++++++..
T Consensus       156 K~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~-~i~~~~~~~~~g~~~~~i~~~~~~r~~i~v~D~a~~v~~~l~~  234 (344)
T 2gn4_A          156 KLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGS-VVPFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVLKSLKR  234 (344)
T ss_dssp             HHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTTS-HHHHHHHHHHHTCCCEEESCTTCEEEEECHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCCC-HHHHHHHHHHcCCCceEEeCCCeEEeeEEHHHHHHHHHHHHhh
Confidence            999999999999888888999999999999998532 1223333333322 1        12246899999999999854


Q ss_pred             CCCCCccccEEEecCC
Q 024338          251 PAAGYITGQVLTIDGG  266 (269)
Q Consensus       251 ~~~~~~~G~~i~~dgg  266 (269)
                      +    ..|+++.++++
T Consensus       235 ~----~~g~~~~~~~~  246 (344)
T 2gn4_A          235 M----HGGEIFVPKIP  246 (344)
T ss_dssp             C----CSSCEEEECCC
T ss_pred             c----cCCCEEecCCC
Confidence            3    25788888765

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.93  E-value=3.6e-25  Score=192.32  Aligned_cols=223  Identities=17%  Similarity=0.109  Sum_probs=165.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCcc
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVD  106 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id  106 (269)
                      |++|||||+|+||.+++++|+++|++|+++.+..........+.+.. ..++.++.+|++|.++++++++..     ++|
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~-~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d   75 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS-LGNFEFVHGDIRNKNDVTRLITKY-----MPD   75 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT-TCCCEEEECCTTCHHHHHHHHHHH-----CCS
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhcc-CCceEEEEcCCCCHHHHHHHHhcc-----CCC
Confidence            57999999999999999999999999998643221222222334433 346888999999999999988752     699


Q ss_pred             EEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcccc------------------
Q 024338          107 ILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLV------------------  168 (269)
Q Consensus       107 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~------------------  168 (269)
                      +|||+||....    +.+.++++..+++|+.++..+++++.+..   ..+++|++||...+.                  
T Consensus        76 ~vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~---~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~  148 (347)
T 1orr_A           76 SCFHLAGQVAM----TTSIDNPCMDFEINVGGTLNLLEAVRQYN---SNCNIIYSSTNKVYGDLEQYKYNETETRYTCVD  148 (347)
T ss_dssp             EEEECCCCCCH----HHHHHCHHHHHHHHHHHHHHHHHHHHHHC---TTCEEEEEEEGGGGTTCTTSCEEECSSCEEETT
T ss_pred             EEEECCcccCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHhC---CCceEEEeccHHHhCCCCcCCcccccccccccc
Confidence            99999996432    12345678899999999999999998754   236999999976432                  


Q ss_pred             ---------CCCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc-----ChHHHHHHHhcC-----
Q 024338          169 ---------GNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL-----GEDLEKKILEKI-----  229 (269)
Q Consensus       169 ---------~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-----~~~~~~~~~~~~-----  229 (269)
                               +.++...|+.+|.+.+.+++.++.++   |++++.++||.+.++.....     ...+........     
T Consensus       149 ~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (347)
T 1orr_A          149 KPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF---GLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINK  225 (347)
T ss_dssp             CTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCC
T ss_pred             cccCccccCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCC
Confidence                     22356789999999999999998876   89999999999999865322     122222222211     


Q ss_pred             CCC---------CCCCHHHHHHHHHHhccCCCCCCccccEEEecCCc
Q 024338          230 PLG---------RYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM  267 (269)
Q Consensus       230 ~~~---------~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg~  267 (269)
                      +..         .+.+++|+|+++++++..  ....+|+++++++|.
T Consensus       226 ~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~--~~~~~g~~~~v~~~~  270 (347)
T 1orr_A          226 PFTISGNGKQVRDVLHAEDMISLYFTALAN--VSKIRGNAFNIGGTI  270 (347)
T ss_dssp             CEEEESSSCCEEECEEHHHHHHHHHHHHHT--HHHHTTCEEEESSCG
T ss_pred             CeEEecCCcceEeeEEHHHHHHHHHHHHhc--cccCCCCEEEeCCCC
Confidence            221         245899999999999853  124689999999884

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.93  E-value=3.9e-25  Score=191.85  Aligned_cols=226  Identities=15%  Similarity=0.062  Sum_probs=163.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHc-CCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS-GGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      .++++|||||+|+||++++++|+++|++|+++ .|+.+...+..+.+... +.++.++.+|++|.+++++++++     .
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~   77 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIA-DNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA-----H   77 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-CCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH-----S
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEE-ecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc-----c
Confidence            46899999999999999999999999999985 66554444444444332 55788899999999999998876     4


Q ss_pred             CccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcccc-----------CCCC
Q 024338          104 TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLV-----------GNIG  172 (269)
Q Consensus       104 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~-----------~~~~  172 (269)
                      ++|+||||||......    ..+..++.+++|+.++..+++++    ++.+.++||++||...+-           +.++
T Consensus        78 ~~d~vih~A~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~  149 (341)
T 3enk_A           78 PITAAIHFAALKAVGE----SVAKPIEYYRNNLDSLLSLLRVM----RERAVKRIVFSSSATVYGVPERSPIDETFPLSA  149 (341)
T ss_dssp             CCCEEEECCCCCCHHH----HHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGBCSCSSSSBCTTSCCBC
T ss_pred             CCcEEEECccccccCc----cccChHHHHHHHHHHHHHHHHHH----HhCCCCEEEEEecceEecCCCCCCCCCCCCCCC
Confidence            8999999999754321    23345678899999988776654    446678999999976552           2234


Q ss_pred             ChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccc------------cChHHHHHHHhc-CC---------
Q 024338          173 QANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAK------------LGEDLEKKILEK-IP---------  230 (269)
Q Consensus       173 ~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~------------~~~~~~~~~~~~-~~---------  230 (269)
                      ...|+.||.+.+.+++.++.++.  +++++.++|+.+.+|....            ..+.+....... .+         
T Consensus       150 ~~~Y~~sK~~~e~~~~~~~~~~~--~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  227 (341)
T 3enk_A          150 TNPYGQTKLMAEQILRDVEAADP--SWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYP  227 (341)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHCT--TCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSS
T ss_pred             CChhHHHHHHHHHHHHHHhhcCC--CceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccC
Confidence            46899999999999999988863  5999999999998874311            111122222211 11         


Q ss_pred             ------CCCCCCHHHHHHHHHHhccCCCCCCccccEEEecCCc
Q 024338          231 ------LGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM  267 (269)
Q Consensus       231 ------~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg~  267 (269)
                            ...+.+++|+|++++.++.... ....|+++++++|.
T Consensus       228 ~~~g~~~~~~i~v~Dva~a~~~~~~~~~-~~~~~~~~ni~~~~  269 (341)
T 3enk_A          228 TPDGTGVRDYIHVVDLARGHIAALDALE-RRDASLTVNLGTGR  269 (341)
T ss_dssp             STTSSCEECEEEHHHHHHHHHHHHHHHH-HHTSCEEEEESCSC
T ss_pred             CCCCCeeEeeEEHHHHHHHHHHHHHhhh-cCCcceEEEeCCCC
Confidence                  1134578999999999985421 12468999998774

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.93  E-value=1.3e-24  Score=189.60  Aligned_cols=240  Identities=15%  Similarity=0.063  Sum_probs=173.3

Q ss_pred             chhhhhhhhhhhcccccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCH----HHHHHHHHHHHHc-CCcEE
Q 024338            5 GIRAQVATIEQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSS----KEAEEVCKEIEAS-GGQAL   79 (269)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~----~~~~~~~~~l~~~-~~~~~   79 (269)
                      |--.|....+..+..  ++++++++|||||+|+||.+++++|+++|++|+++ .|+.    +.++++.+++... ..++.
T Consensus         8 ~~~~~~~~~~~~~~~--~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~   84 (352)
T 1sb8_A            8 GSMGMMSRYEELRKE--LPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGL-DNFATGHQRNLDEVRSLVSEKQWSNFK   84 (352)
T ss_dssp             ----CCCHHHHHHHH--HHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECCSSCCHHHHHHHHHHSCHHHHTTEE
T ss_pred             cchHHHHHHHhhchh--cCccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEE-eCCCccchhhHHHHhhhcccccCCceE
Confidence            333444444455443  33457899999999999999999999999999886 4543    2333333322111 25788


Q ss_pred             EEEccCCCHHHHHHHHHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEE
Q 024338           80 TFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRII  159 (269)
Q Consensus        80 ~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv  159 (269)
                      ++.+|++|.++++++++       ++|+|||+||.....    .+.+++++.+++|+.++..+++++.+    .+.+++|
T Consensus        85 ~~~~Dl~d~~~~~~~~~-------~~d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~v  149 (352)
T 1sb8_A           85 FIQGDIRNLDDCNNACA-------GVDYVLHQAALGSVP----RSINDPITSNATNIDGFLNMLIAARD----AKVQSFT  149 (352)
T ss_dssp             EEECCTTSHHHHHHHHT-------TCSEEEECCSCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHHH----TTCSEEE
T ss_pred             EEECCCCCHHHHHHHhc-------CCCEEEECCcccCch----hhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCEEE
Confidence            99999999998888776       799999999965321    13456788999999999999988865    4567999


Q ss_pred             EEcCCccccCCC-----------CChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc------ChHHH
Q 024338          160 NIASVVGLVGNI-----------GQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL------GEDLE  222 (269)
Q Consensus       160 ~isS~~~~~~~~-----------~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~------~~~~~  222 (269)
                      ++||...+.+.+           +...|+.+|.+.+.+++.++.++   |++++.++||.+.+|.....      .+.+.
T Consensus       150 ~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~  226 (352)
T 1sb8_A          150 YAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRRQDPNGAYAAVIPKWT  226 (352)
T ss_dssp             EEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTTCCCCSTTCCHHHHHH
T ss_pred             EeccHHhcCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEEECceeCcCCCCCcchhhHHHHHH
Confidence            999987754432           45789999999999999998876   79999999999999865422      12333


Q ss_pred             HHHHhcCCC---------CCCCCHHHHHHHHHHhccCCCCCCccccEEEecCCc
Q 024338          223 KKILEKIPL---------GRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM  267 (269)
Q Consensus       223 ~~~~~~~~~---------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg~  267 (269)
                      .....+.+.         ..+.+++|+|++++.++..+  ....|+++++.+|.
T Consensus       227 ~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~--~~~~~~~~ni~~~~  278 (352)
T 1sb8_A          227 SSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAG--LDARNQVYNIAVGG  278 (352)
T ss_dssp             HHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCC--GGGCSEEEEESCSC
T ss_pred             HHHHCCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhcc--ccCCCceEEeCCCC
Confidence            333333332         14568999999999988542  13578999998774

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.93  E-value=4.2e-25  Score=190.11  Aligned_cols=215  Identities=16%  Similarity=0.155  Sum_probs=163.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      ..+.+++|||||+|+||.+++++|+++|++|+++ .|+.+. +.    +     ++.++.+|++|.++++++++.     
T Consensus         9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~-~r~~~~-~~----l-----~~~~~~~Dl~d~~~~~~~~~~-----   72 (321)
T 2pk3_A            9 HHGSMRALITGVAGFVGKYLANHLTEQNVEVFGT-SRNNEA-KL----P-----NVEMISLDIMDSQRVKKVISD-----   72 (321)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ESCTTC-CC----T-----TEEEEECCTTCHHHHHHHHHH-----
T ss_pred             ccCcceEEEECCCChHHHHHHHHHHHCCCEEEEE-ecCCcc-cc----c-----eeeEEECCCCCHHHHHHHHHh-----
Confidence            3456899999999999999999999999999985 565432 11    1     678899999999999988875     


Q ss_pred             CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccC-------------
Q 024338          103 GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVG-------------  169 (269)
Q Consensus       103 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~-------------  169 (269)
                      +++|+||||||.....    .+.+++++.+++|+.++..+++++ +.+  ++.+++|++||...+..             
T Consensus        73 ~~~d~vih~A~~~~~~----~~~~~~~~~~~~Nv~g~~~l~~a~-~~~--~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~  145 (321)
T 2pk3_A           73 IKPDYIFHLAAKSSVK----DSWLNKKGTFSTNVFGTLHVLDAV-RDS--NLDCRILTIGSSEEYGMILPEESPVSEENQ  145 (321)
T ss_dssp             HCCSEEEECCSCCCHH----HHTTCHHHHHHHHHHHHHHHHHHH-HHH--TCCCEEEEEEEGGGTBSCCGGGCSBCTTSC
T ss_pred             cCCCEEEEcCcccchh----hhhhcHHHHHHHHHHHHHHHHHHH-HHh--CCCCeEEEEccHHhcCCCCCCCCCCCCCCC
Confidence            3799999999975321    122357889999999999999999 544  35689999999875533             


Q ss_pred             CCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc--ChHHHHHHHh---c--C---------CCCC
Q 024338          170 NIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL--GEDLEKKILE---K--I---------PLGR  233 (269)
Q Consensus       170 ~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~--~~~~~~~~~~---~--~---------~~~~  233 (269)
                      .++...|+.+|.+.+.+++.++.++   |++++.++||.+.+|.....  .+.+......   +  .         +...
T Consensus       146 ~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  222 (321)
T 2pk3_A          146 LRPMSPYGVSKASVGMLARQYVKAY---GMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRD  222 (321)
T ss_dssp             CBCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEE
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHc---CCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEe
Confidence            2456789999999999999998875   89999999999999865431  2233333322   2  1         1123


Q ss_pred             CCCHHHHHHHHHHhccCCCCCCccccEEEecCCc
Q 024338          234 YGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM  267 (269)
Q Consensus       234 ~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg~  267 (269)
                      +.+++|+|+++++++..+    .+|+++++++|.
T Consensus       223 ~v~v~Dva~a~~~~~~~~----~~g~~~~i~~~~  252 (321)
T 2pk3_A          223 FTDVRDIVQAYWLLSQYG----KTGDVYNVCSGI  252 (321)
T ss_dssp             EEEHHHHHHHHHHHHHHC----CTTCEEEESCSC
T ss_pred             eEEHHHHHHHHHHHHhCC----CCCCeEEeCCCC
Confidence            568999999999998643    468999998874

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.93  E-value=3.5e-26  Score=189.26  Aligned_cols=195  Identities=18%  Similarity=0.135  Sum_probs=147.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC--cEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGC--KVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~--~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      +++|++|||||+|+||++++++|+++|+  +|+++ .|+++..++..      ..++.++.+|++|.++++++++     
T Consensus        16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~-~r~~~~~~~~~------~~~~~~~~~D~~d~~~~~~~~~-----   83 (242)
T 2bka_A           16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLI-GRRKLTFDEEA------YKNVNQEVVDFEKLDDYASAFQ-----   83 (242)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEE-ESSCCCCCSGG------GGGCEEEECCGGGGGGGGGGGS-----
T ss_pred             hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEE-EcCCCCccccc------cCCceEEecCcCCHHHHHHHhc-----
Confidence            5689999999999999999999999999  88885 56554322111      1257788999999988877664     


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKA  181 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  181 (269)
                        ++|+||||||....       .+.++..+++|+.++..+++++.    +.+.++||++||..+..  ++...|+.+|+
T Consensus        84 --~~d~vi~~ag~~~~-------~~~~~~~~~~n~~~~~~~~~~~~----~~~~~~iv~~SS~~~~~--~~~~~Y~~sK~  148 (242)
T 2bka_A           84 --GHDVGFCCLGTTRG-------KAGAEGFVRVDRDYVLKSAELAK----AGGCKHFNLLSSKGADK--SSNFLYLQVKG  148 (242)
T ss_dssp             --SCSEEEECCCCCHH-------HHHHHHHHHHHTHHHHHHHHHHH----HTTCCEEEEECCTTCCT--TCSSHHHHHHH
T ss_pred             --CCCEEEECCCcccc-------cCCcccceeeeHHHHHHHHHHHH----HCCCCEEEEEccCcCCC--CCcchHHHHHH
Confidence              79999999996422       23568899999999888777653    45678999999988765  34568999999


Q ss_pred             HHHHHHHHHHHHhccCCe-EEEEEecCCccCCcccccC-hHHHHHHHhcCC----CCCCCCHHHHHHHHHHhccCCC
Q 024338          182 GVIGLTKTVAKEYASRNI-NVNAIAPGFIASDMTAKLG-EDLEKKILEKIP----LGRYGQPEEVAGLVEFLALNPA  252 (269)
Q Consensus       182 al~~~~~~la~e~~~~gi-~v~~v~pG~v~t~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~~a~~~~~l~~~~~  252 (269)
                      +++.+++.+       ++ +++.|+||++.|+...... +..........|    .+++.+++|+|++++++++++.
T Consensus       149 ~~e~~~~~~-------~~~~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~  218 (242)
T 2bka_A          149 EVEAKVEEL-------KFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPR  218 (242)
T ss_dssp             HHHHHHHTT-------CCSEEEEEECCEEECTTGGGSHHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSCC
T ss_pred             HHHHHHHhc-------CCCCeEEEcCceecCCCCCCcHHHHHHHHhhcccCccccCCcccCHHHHHHHHHHHHhCcc
Confidence            999987653       46 8999999999999653321 222222323344    3456789999999999996543

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.92  E-value=7.5e-25  Score=189.73  Aligned_cols=219  Identities=16%  Similarity=0.132  Sum_probs=161.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcC--CcEEEEecCCH--HHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAG--CKVLVNYARSS--KEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G--~~v~i~~~r~~--~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      +++++|||||+|+||.+++++|+++|  ++|+++ .|+.  ...+.+ +++. ...++.++.+|++|.+++++++.    
T Consensus         2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~-~r~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~d~~~~~~~~~----   74 (336)
T 2hun_A            2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINI-DKLGYGSNPANL-KDLE-DDPRYTFVKGDVADYELVKELVR----   74 (336)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEE-ECCCTTCCGGGG-TTTT-TCTTEEEEECCTTCHHHHHHHHH----
T ss_pred             CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEE-ecCcccCchhHH-hhhc-cCCceEEEEcCCCCHHHHHHHhh----
Confidence            35679999999999999999999997  888885 4432  111111 1111 13578899999999999888873    


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcccc-----------C
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLV-----------G  169 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~-----------~  169 (269)
                         ++|+||||||....    +.+.+++++.+++|+.++..+++++.+.   +..+++|++||...+-           +
T Consensus        75 ---~~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~~~~~iv~~SS~~vyg~~~~~~~~E~~~  144 (336)
T 2hun_A           75 ---KVDGVVHLAAESHV----DRSISSPEIFLHSNVIGTYTLLESIRRE---NPEVRFVHVSTDEVYGDILKGSFTENDR  144 (336)
T ss_dssp             ---TCSEEEECCCCCCH----HHHHHCTHHHHHHHHHHHHHHHHHHHHH---CTTSEEEEEEEGGGGCCCSSSCBCTTBC
T ss_pred             ---CCCEEEECCCCcCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHh---CCCcEEEEeccHHHHCCCCCCCcCCCCC
Confidence               89999999996532    1234567889999999999999999875   2347999999975432           3


Q ss_pred             CCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccc--cChHHHHHHHhcCC---------CCCCCCHH
Q 024338          170 NIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAK--LGEDLEKKILEKIP---------LGRYGQPE  238 (269)
Q Consensus       170 ~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~--~~~~~~~~~~~~~~---------~~~~~~~~  238 (269)
                      .++...|+.+|.+.+.+++.++.++   |++++.++||.+.+|....  ..+.+......+.+         ...+.+++
T Consensus       145 ~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  221 (336)
T 2hun_A          145 LMPSSPYSATKAASDMLVLGWTRTY---NLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVE  221 (336)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHT---TCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC---CEEEEEHH
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCCceeeeEEHH
Confidence            4456789999999999999998875   7999999999999987532  11223333333221         12355799


Q ss_pred             HHHHHHHHhccCCCCCCccccEEEecCCc
Q 024338          239 EVAGLVEFLALNPAAGYITGQVLTIDGGM  267 (269)
Q Consensus       239 ~~a~~~~~l~~~~~~~~~~G~~i~~dgg~  267 (269)
                      |+|+++++++..+    .+|+++++++|.
T Consensus       222 Dva~~~~~~~~~~----~~g~~~~v~~~~  246 (336)
T 2hun_A          222 DHVRAIELVLLKG----ESREIYNISAGE  246 (336)
T ss_dssp             HHHHHHHHHHHHC----CTTCEEEECCSC
T ss_pred             HHHHHHHHHHhCC----CCCCEEEeCCCC
Confidence            9999999998542    378999999875

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.92  E-value=2e-24  Score=176.50  Aligned_cols=190  Identities=9%  Similarity=0.064  Sum_probs=143.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHH-HcCCcEEEEecCCHH-HHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           27 PVAVVTGASRGIGRAVATSLG-KAGCKVLVNYARSSK-EAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~-~~G~~v~i~~~r~~~-~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      |++|||||+|+||++++++|+ ++|++|+++ .|+++ .++++.    ....++.++.+|++|.++++++++       +
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~-~r~~~~~~~~~~----~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMHITLY-GRQLKTRIPPEI----IDHERVTVIEGSFQNPGXLEQAVT-------N   73 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCEEEEE-ESSHHHHSCHHH----HTSTTEEEEECCTTCHHHHHHHHT-------T
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCceEEEE-ecCccccchhhc----cCCCceEEEECCCCCHHHHHHHHc-------C
Confidence            789999999999999999999 899999884 77776 554443    235678999999999999988876       7


Q ss_pred             ccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCCh----------
Q 024338          105 VDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQA----------  174 (269)
Q Consensus       105 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~----------  174 (269)
                      +|+||||||..                   |+.     ++.+++.|++.+.++||++||..+..+.+...          
T Consensus        74 ~d~vv~~ag~~-------------------n~~-----~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~~~~~~~~~~~  129 (221)
T 3r6d_A           74 AEVVFVGAMES-------------------GSD-----MASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFDNLPI  129 (221)
T ss_dssp             CSEEEESCCCC-------------------HHH-----HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHHHHHHHHTSCH
T ss_pred             CCEEEEcCCCC-------------------Chh-----HHHHHHHHHhcCCCeEEEEeeceecCCCCccccccccccccc
Confidence            89999999853                   222     77888888888888999999998887666544          


Q ss_pred             hhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcc-cccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhc--cCC
Q 024338          175 NYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMT-AKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLA--LNP  251 (269)
Q Consensus       175 ~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~--~~~  251 (269)
                      .|+.+|.+++.+.+.       .|++++.|+||++.++.. .......    ......+...+++|+|+++++++  +++
T Consensus       130 ~y~~~K~~~e~~~~~-------~~i~~~~vrpg~v~~~~~~~~~~~~~----~~~~~~~~~~~~~dvA~~~~~l~~~~~~  198 (221)
T 3r6d_A          130 SYVQGERQARNVLRE-------SNLNYTILRLTWLYNDPEXTDYELIP----EGAQFNDAQVSREAVVKAIFDILHAADE  198 (221)
T ss_dssp             HHHHHHHHHHHHHHH-------SCSEEEEEEECEEECCTTCCCCEEEC----TTSCCCCCEEEHHHHHHHHHHHHTCSCC
T ss_pred             HHHHHHHHHHHHHHh-------CCCCEEEEechhhcCCCCCcceeecc----CCccCCCceeeHHHHHHHHHHHHHhcCh
Confidence            899999999887653       589999999999988732 2111000    00112233568999999999999  664


Q ss_pred             CCCCccccEEEecC
Q 024338          252 AAGYITGQVLTIDG  265 (269)
Q Consensus       252 ~~~~~~G~~i~~dg  265 (269)
                      . .++ ++.+.+++
T Consensus       199 ~-~~~-~~~~~i~~  210 (221)
T 3r6d_A          199 T-PFH-RTSIGVGE  210 (221)
T ss_dssp             G-GGT-TEEEEEEC
T ss_pred             h-hhh-cceeeecC
Confidence            3 344 45555544

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.92  E-value=1.5e-24  Score=187.78  Aligned_cols=215  Identities=13%  Similarity=0.120  Sum_probs=152.9

Q ss_pred             ccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHH
Q 024338           20 AAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAV   99 (269)
Q Consensus        20 ~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~   99 (269)
                      ...+++++++|||||+|+||.+++++|+++|++|+++ .|+.+...+..+.+    .++.++.+|++|.++++++++++ 
T Consensus        14 ~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~l----~~v~~~~~Dl~d~~~~~~~~~~~-   87 (330)
T 2pzm_A           14 LVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVI-DNFATGKREVLPPV----AGLSVIEGSVTDAGLLERAFDSF-   87 (330)
T ss_dssp             CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEE-ECCSSSCGGGSCSC----TTEEEEECCTTCHHHHHHHHHHH-
T ss_pred             CcccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE-ECCCccchhhhhcc----CCceEEEeeCCCHHHHHHHHhhc-
Confidence            3467889999999999999999999999999999885 55432211111111    46888999999999999988765 


Q ss_pred             HhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCC-----C---
Q 024338          100 DAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGN-----I---  171 (269)
Q Consensus       100 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~-----~---  171 (269)
                          ++|+||||||.....     +.++++  +++|+.++..+++++..    .+.+++|++||...+.+.     +   
T Consensus        88 ----~~D~vih~A~~~~~~-----~~~~~~--~~~N~~~~~~l~~a~~~----~~~~~iV~~SS~~~~~~~~~~~~~~~E  152 (330)
T 2pzm_A           88 ----KPTHVVHSAAAYKDP-----DDWAED--AATNVQGSINVAKAASK----AGVKRLLNFQTALCYGRPATVPIPIDS  152 (330)
T ss_dssp             ----CCSEEEECCCCCSCT-----TCHHHH--HHHHTHHHHHHHHHHHH----HTCSEEEEEEEGGGGCSCSSSSBCTTC
T ss_pred             ----CCCEEEECCccCCCc-----cccChh--HHHHHHHHHHHHHHHHH----cCCCEEEEecCHHHhCCCccCCCCcCC
Confidence                799999999975432     334555  99999999999998874    356899999998775433     2   


Q ss_pred             ---CChhhHHhHHHHHHHHHHHHHHhccCCeE-EEEEecCCccCCcccccChHHHHHHHhc-CC-----CCCCCCHHHHH
Q 024338          172 ---GQANYSAAKAGVIGLTKTVAKEYASRNIN-VNAIAPGFIASDMTAKLGEDLEKKILEK-IP-----LGRYGQPEEVA  241 (269)
Q Consensus       172 ---~~~~Y~~sK~al~~~~~~la~e~~~~gi~-v~~v~pG~v~t~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~a  241 (269)
                         +...|+.+|++.+.+++.+  ++....|| ++.+.||. .+++    ...+....... ..     ...+.+++|+|
T Consensus       153 ~~~~~~~Y~~sK~~~e~~~~~~--~~~~~~iR~~~v~gp~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  225 (330)
T 2pzm_A          153 PTAPFTSYGISKTAGEAFLMMS--DVPVVSLRLANVTGPRL-AIGP----IPTFYKRLKAGQKCFCSDTVRDFLDMSDFL  225 (330)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHTC--SSCEEEEEECEEECTTC-CSSH----HHHHHHHHHTTCCCCEESCEECEEEHHHHH
T ss_pred             CCCCCChHHHHHHHHHHHHHHc--CCCEEEEeeeeeECcCC-CCCH----HHHHHHHHHcCCEEeCCCCEecceeHHHHH
Confidence               5678999999999998876  22222344 34444543 2222    12222222221 11     23456899999


Q ss_pred             H-HHHHhccCCCCCCccccEEEecCCc
Q 024338          242 G-LVEFLALNPAAGYITGQVLTIDGGM  267 (269)
Q Consensus       242 ~-~~~~l~~~~~~~~~~G~~i~~dgg~  267 (269)
                      + +++++++.+  .   |+++++++|.
T Consensus       226 ~~a~~~~~~~~--~---g~~~~v~~~~  247 (330)
T 2pzm_A          226 AIADLSLQEGR--P---TGVFNVSTGE  247 (330)
T ss_dssp             HHHHHHTSTTC--C---CEEEEESCSC
T ss_pred             HHHHHHHhhcC--C---CCEEEeCCCC
Confidence            9 999998542  1   8999999875

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.92  E-value=1.2e-24  Score=190.14  Aligned_cols=221  Identities=17%  Similarity=0.132  Sum_probs=164.4

Q ss_pred             EEEEeCCCCchHHHHHHHHHHc-CCcEEEEecCCH--HHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           28 VAVVTGASRGIGRAVATSLGKA-GCKVLVNYARSS--KEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~-G~~v~i~~~r~~--~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      ++|||||+|+||.+++++|+++ |++|+++ .|+.  ...+.+ .++. ...++.++.+|++|.+++.+++++.     +
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~-~r~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~-----~   73 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNI-DKLTYAGNLESL-SDIS-ESNRYNFEHADICDSAEITRIFEQY-----Q   73 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEE-ECCCTTCCGGGG-TTTT-TCTTEEEEECCTTCHHHHHHHHHHH-----C
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEE-ecCCCCCchhhh-hhhh-cCCCeEEEECCCCCHHHHHHHHhhc-----C
Confidence            4999999999999999999998 7998885 4432  111111 1111 1357889999999999999988763     8


Q ss_pred             ccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-----CCeEEEEcCCcccc-----------
Q 024338          105 VDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK-----KGRIINIASVVGLV-----------  168 (269)
Q Consensus       105 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-----~~~iv~isS~~~~~-----------  168 (269)
                      +|+||||||....    +.+.+++++.+++|+.++..+++++.+.|..-+     .++||++||...+-           
T Consensus        74 ~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~  149 (361)
T 1kew_A           74 PDAVMHLAAESHV----DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENS  149 (361)
T ss_dssp             CSEEEECCSCCCH----HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTT
T ss_pred             CCEEEECCCCcCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCccccccccc
Confidence            9999999997532    123456788999999999999999999874311     35999999975321           


Q ss_pred             ----------CCCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccc--cChHHHHHHHhcCC------
Q 024338          169 ----------GNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAK--LGEDLEKKILEKIP------  230 (269)
Q Consensus       169 ----------~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~--~~~~~~~~~~~~~~------  230 (269)
                                +.++...|+.||.+.+.+++.++.++   |++++.++||.+.+|....  ..+.+......+.+      
T Consensus       150 ~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (361)
T 1kew_A          150 VTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGK  226 (361)
T ss_dssp             SCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETT
T ss_pred             ccCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCceEcCC
Confidence                      23456789999999999999999876   7999999999999997532  12223333333221      


Q ss_pred             ---CCCCCCHHHHHHHHHHhccCCCCCCccccEEEecCCc
Q 024338          231 ---LGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM  267 (269)
Q Consensus       231 ---~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg~  267 (269)
                         .+.+.+++|+|++++++++.+    .+|+++++++|.
T Consensus       227 ~~~~~~~i~v~Dva~a~~~~~~~~----~~g~~~~v~~~~  262 (361)
T 1kew_A          227 GDQIRDWLYVEDHARALHMVVTEG----KAGETYNIGGHN  262 (361)
T ss_dssp             SCCEEEEEEHHHHHHHHHHHHHHC----CTTCEEEECCCC
T ss_pred             CceeEeeEEHHHHHHHHHHHHhCC----CCCCEEEecCCC
Confidence               123557999999999998542    479999999875

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.92  E-value=2.2e-24  Score=188.38  Aligned_cols=229  Identities=14%  Similarity=0.096  Sum_probs=167.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      ++++++|||||+|+||.+++++|+++|++|+++ .|+.+....+.+.+. ...++.++.+|++|.+++.++++..     
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~-----   79 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGY-SLTAPTVPSLFETAR-VADGMQSEIGDIRDQNKLLESIREF-----   79 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ESSCSSSSCHHHHTT-TTTTSEEEECCTTCHHHHHHHHHHH-----
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEE-eCCCcccchhhHhhc-cCCceEEEEccccCHHHHHHHHHhc-----
Confidence            457899999999999999999999999999885 555443333333322 2456788999999999999988765     


Q ss_pred             CccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcccc------------CCC
Q 024338          104 TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLV------------GNI  171 (269)
Q Consensus       104 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~------------~~~  171 (269)
                      ++|+|||+||....    ..+.+++++.+++|+.++..+++++.+.   ...+++|++||...+-            +.+
T Consensus        80 ~~d~vih~A~~~~~----~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~  152 (357)
T 1rkx_A           80 QPEIVFHMAAQPLV----RLSYSEPVETYSTNVMGTVYLLEAIRHV---GGVKAVVNITSDKCYDNKEWIWGYRENEAMG  152 (357)
T ss_dssp             CCSEEEECCSCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHHH---CCCCEEEEECCGGGBCCCCSSSCBCTTSCBC
T ss_pred             CCCEEEECCCCccc----ccchhCHHHHHHHHHHHHHHHHHHHHHh---CCCCeEEEecCHHHhCCCCcCCCCCCCCCCC
Confidence            79999999996321    1234567889999999999999998762   3367999999986431            234


Q ss_pred             CChhhHHhHHHHHHHHHHHHHHhc------cCCeEEEEEecCCccCCcccc---cChHHHHHHHhcCCC--------CCC
Q 024338          172 GQANYSAAKAGVIGLTKTVAKEYA------SRNINVNAIAPGFIASDMTAK---LGEDLEKKILEKIPL--------GRY  234 (269)
Q Consensus       172 ~~~~Y~~sK~al~~~~~~la~e~~------~~gi~v~~v~pG~v~t~~~~~---~~~~~~~~~~~~~~~--------~~~  234 (269)
                      +...|+.+|.+.+.+++.++.++.      +.|++++.++||.+.+|....   ....+......+.+.        ..+
T Consensus       153 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  232 (357)
T 1rkx_A          153 GYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPW  232 (357)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECC
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEECCCCCeecc
Confidence            567899999999999999999875      458999999999999985421   223333333332221        235


Q ss_pred             CCHHHHHHHHHHhccCCC-CCCccccEEEecCC
Q 024338          235 GQPEEVAGLVEFLALNPA-AGYITGQVLTIDGG  266 (269)
Q Consensus       235 ~~~~~~a~~~~~l~~~~~-~~~~~G~~i~~dgg  266 (269)
                      .+++|+|++++.++.... .....|+++++.+|
T Consensus       233 v~v~Dva~a~~~~~~~~~~~~~~~~~~~ni~~~  265 (357)
T 1rkx_A          233 QHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPN  265 (357)
T ss_dssp             EETHHHHHHHHHHHHHHHHTCGGGCSEEECCCC
T ss_pred             EeHHHHHHHHHHHHHhhhhcCCCCCceEEECCC
Confidence            678999999999884210 01134688888653

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.92  E-value=4.5e-24  Score=185.15  Aligned_cols=223  Identities=17%  Similarity=0.094  Sum_probs=158.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHH-HHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAE-EVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~-~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      +++|++|||||+|+||.+++++|+++|++|+++ .|+.+... +..+.+. ...++.++.+|++|.+++.++++.+    
T Consensus         1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~-~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~----   74 (345)
T 2z1m_A            1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGA-DRRSGEFASWRLKELG-IENDVKIIHMDLLEFSNIIRTIEKV----   74 (345)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-CSCCSTTTTHHHHHTT-CTTTEEECCCCTTCHHHHHHHHHHH----
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEE-ECCCcccccccHhhcc-ccCceeEEECCCCCHHHHHHHHHhc----
Confidence            357999999999999999999999999999885 56543321 1111111 1246888999999999999988865    


Q ss_pred             CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccc-----------cCCC
Q 024338          103 GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGL-----------VGNI  171 (269)
Q Consensus       103 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~-----------~~~~  171 (269)
                       ++|+||||||....    +.+.+++++.+++|+.++..+++++.+ +  ...+++|++||...+           .+.+
T Consensus        75 -~~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~-~--~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~  146 (345)
T 2z1m_A           75 -QPDEVYNLAAQSFV----GVSFEQPILTAEVDAIGVLRILEALRT-V--KPDTKFYQASTSEMFGKVQEIPQTEKTPFY  146 (345)
T ss_dssp             -CCSEEEECCCCCCH----HHHTTSHHHHHHHHTHHHHHHHHHHHH-H--CTTCEEEEEEEGGGGCSCSSSSBCTTSCCC
T ss_pred             -CCCEEEECCCCcch----hhhhhCHHHHHHHHHHHHHHHHHHHHH-h--CCCceEEEEechhhcCCCCCCCCCccCCCC
Confidence             79999999996532    112346788999999999999999885 2  224799999998543           2344


Q ss_pred             CChhhHHhHHHHHHHHHHHHHHhc---cCCeEEEEEecCCccCCcccccChHHHHHHHhcC----------CCCCCCCHH
Q 024338          172 GQANYSAAKAGVIGLTKTVAKEYA---SRNINVNAIAPGFIASDMTAKLGEDLEKKILEKI----------PLGRYGQPE  238 (269)
Q Consensus       172 ~~~~Y~~sK~al~~~~~~la~e~~---~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~----------~~~~~~~~~  238 (269)
                      +...|+.||.+.+.+++.++.++.   ..++.++.+.||...+++.... .........+.          ....+.+++
T Consensus       147 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  225 (345)
T 2z1m_A          147 PRSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKI-TYSLARIKYGLQDKLVLGNLNAKRDWGYAP  225 (345)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHH-HHHHHHHHTTSCSCEEESCTTCEECCEEHH
T ss_pred             CCChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHH-HHHHHHHHcCCCCeeeeCCCCceeeeEEHH
Confidence            567899999999999999998875   3345667788888777653221 11111111111          012366899


Q ss_pred             HHHHHHHHhccCCCCCCccccEEEecCC
Q 024338          239 EVAGLVEFLALNPAAGYITGQVLTIDGG  266 (269)
Q Consensus       239 ~~a~~~~~l~~~~~~~~~~G~~i~~dgg  266 (269)
                      |+|++++++++.+.     ++++++.+|
T Consensus       226 Dva~a~~~~~~~~~-----~~~~~i~~~  248 (345)
T 2z1m_A          226 EYVEAMWLMMQQPE-----PDDYVIATG  248 (345)
T ss_dssp             HHHHHHHHHHTSSS-----CCCEEECCS
T ss_pred             HHHHHHHHHHhCCC-----CceEEEeCC
Confidence            99999999995432     356666554

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.92  E-value=7.6e-25  Score=181.89  Aligned_cols=212  Identities=16%  Similarity=0.109  Sum_probs=153.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHc--CCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKA--GCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~--G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      +.+|++|||||+|+||++++++|+++  |++|+++ .|+++..+++       ..++.++.+|++|.++++++++     
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~-~r~~~~~~~~-------~~~~~~~~~D~~d~~~~~~~~~-----   68 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGL-VRSAQGKEKI-------GGEADVFIGDITDADSINPAFQ-----   68 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEE-ESCHHHHHHT-------TCCTTEEECCTTSHHHHHHHHT-----
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEE-EcCCCchhhc-------CCCeeEEEecCCCHHHHHHHHc-----
Confidence            35789999999999999999999999  8998884 7776554332       3456688999999999888875     


Q ss_pred             cCCccEEEEccCCCCCCcc---------cCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCC
Q 024338          102 WGTVDILINNAGITRDTLL---------MRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIG  172 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~---------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~  172 (269)
                        ++|+||||||.......         .+...+.+++.+++|+.++..+++++.+    .+.+++|++||..+..+.++
T Consensus        69 --~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~  142 (253)
T 1xq6_A           69 --GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKV----AGVKHIVVVGSMGGTNPDHP  142 (253)
T ss_dssp             --TCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHH----HTCSEEEEEEETTTTCTTCG
T ss_pred             --CCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHH----cCCCEEEEEcCccCCCCCCc
Confidence              68999999997532110         1112234456889999998888877754    45679999999987655444


Q ss_pred             Chh-----hHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc--ChHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 024338          173 QAN-----YSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL--GEDLEKKILEKIPLGRYGQPEEVAGLVE  245 (269)
Q Consensus       173 ~~~-----Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~~  245 (269)
                      ...     |+.+|.+++.+++.       .|++++.++||.+.++.....  ..........  ....+.+++|+|++++
T Consensus       143 ~~~~~~~~y~~sK~~~e~~~~~-------~~i~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dva~~~~  213 (253)
T 1xq6_A          143 LNKLGNGNILVWKRKAEQYLAD-------SGTPYTIIRAGGLLDKEGGVRELLVGKDDELLQ--TDTKTVPRADVAEVCI  213 (253)
T ss_dssp             GGGGGGCCHHHHHHHHHHHHHT-------SSSCEEEEEECEEECSCSSSSCEEEESTTGGGG--SSCCEEEHHHHHHHHH
T ss_pred             cccccchhHHHHHHHHHHHHHh-------CCCceEEEecceeecCCcchhhhhccCCcCCcC--CCCcEEcHHHHHHHHH
Confidence            433     56699998887652       689999999999998853211  0000000011  1234568999999999


Q ss_pred             HhccCCCCCCccccEEEecCC
Q 024338          246 FLALNPAAGYITGQVLTIDGG  266 (269)
Q Consensus       246 ~l~~~~~~~~~~G~~i~~dgg  266 (269)
                      +++..+.   .+|++++++++
T Consensus       214 ~~~~~~~---~~g~~~~i~~~  231 (253)
T 1xq6_A          214 QALLFEE---AKNKAFDLGSK  231 (253)
T ss_dssp             HHTTCGG---GTTEEEEEEEC
T ss_pred             HHHcCcc---ccCCEEEecCC
Confidence            9996532   47899999875

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.91  E-value=1.2e-23  Score=169.35  Aligned_cols=198  Identities=16%  Similarity=0.107  Sum_probs=146.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTV  105 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i  105 (269)
                      +++++||||+|+||++++++|+++|++|+++ .|+++.....      ...++.++.+|++|.+++.++++       .+
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~-~r~~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~~-------~~   68 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVL-VRDSSRLPSE------GPRPAHVVVGDVLQAADVDKTVA-------GQ   68 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEE-ESCGGGSCSS------SCCCSEEEESCTTSHHHHHHHHT-------TC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEE-EeChhhcccc------cCCceEEEEecCCCHHHHHHHHc-------CC
Confidence            4789999999999999999999999999885 6766543211      13467889999999998888775       68


Q ss_pred             cEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCC----CChhhHHhHH
Q 024338          106 DILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNI----GQANYSAAKA  181 (269)
Q Consensus       106 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~----~~~~Y~~sK~  181 (269)
                      |+|||++|.....   +.        .++|+.++..+++++.+    .+.+++|++||.......+    +...|+.+|.
T Consensus        69 d~vi~~a~~~~~~---~~--------~~~n~~~~~~~~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~y~~~K~  133 (206)
T 1hdo_A           69 DAVIVLLGTRNDL---SP--------TTVMSEGARNIVAAMKA----HGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHI  133 (206)
T ss_dssp             SEEEECCCCTTCC---SC--------CCHHHHHHHHHHHHHHH----HTCCEEEEECCGGGTSCTTCSCGGGHHHHHHHH
T ss_pred             CEEEECccCCCCC---Cc--------cchHHHHHHHHHHHHHH----hCCCeEEEEeeeeeccCcccccccchhHHHHHH
Confidence            9999999975431   11        13777787777766643    4567999999987665444    5678999999


Q ss_pred             HHHHHHHHHHHHhccCCeEEEEEecCCc-cCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccE
Q 024338          182 GVIGLTKTVAKEYASRNINVNAIAPGFI-ASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQV  260 (269)
Q Consensus       182 al~~~~~~la~e~~~~gi~v~~v~pG~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~  260 (269)
                      +++.+.+       ..|++++.++||.+ .++.........     ...+.+.+.+++|+|+++++++..+   ..+|++
T Consensus       134 ~~e~~~~-------~~~i~~~~lrp~~~~~~~~~~~~~~~~-----~~~~~~~~i~~~Dva~~~~~~~~~~---~~~g~~  198 (206)
T 1hdo_A          134 RMHKVLR-------ESGLKYVAVMPPHIGDQPLTGAYTVTL-----DGRGPSRVISKHDLGHFMLRCLTTD---EYDGHS  198 (206)
T ss_dssp             HHHHHHH-------HTCSEEEEECCSEEECCCCCSCCEEES-----SSCSSCSEEEHHHHHHHHHHTTSCS---TTTTCE
T ss_pred             HHHHHHH-------hCCCCEEEEeCCcccCCCCCcceEecc-----cCCCCCCccCHHHHHHHHHHHhcCc---cccccc
Confidence            9988874       25899999999998 344322111100     1122145678999999999999654   268999


Q ss_pred             EEecCCc
Q 024338          261 LTIDGGM  267 (269)
Q Consensus       261 i~~dgg~  267 (269)
                      +.++||+
T Consensus       199 ~~i~~g~  205 (206)
T 1hdo_A          199 TYPSHQY  205 (206)
T ss_dssp             EEEECCC
T ss_pred             eeeeccc
Confidence            9999986

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.91  E-value=1.8e-24  Score=176.57  Aligned_cols=192  Identities=18%  Similarity=0.263  Sum_probs=151.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCC-HHHHHHHHHHHHHhcCCcc
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK-EADVESMIKTAVDAWGTVD  106 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~-~~~~~~~~~~~~~~~~~id  106 (269)
                      ++|||||+|+||++++++|+++|++|+++ .|+++..++.        .++.++.+|++| .+++.++++       ++|
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~-~R~~~~~~~~--------~~~~~~~~D~~d~~~~~~~~~~-------~~d   65 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAG-ARKVEQVPQY--------NNVKAVHFDVDWTPEEMAKQLH-------GMD   65 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEE-ESSGGGSCCC--------TTEEEEECCTTSCHHHHHTTTT-------TCS
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEE-ECCccchhhc--------CCceEEEecccCCHHHHHHHHc-------CCC
Confidence            59999999999999999999999999885 6776543321        578899999999 888877765       799


Q ss_pred             EEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCC-------ChhhHHh
Q 024338          107 ILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIG-------QANYSAA  179 (269)
Q Consensus       107 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~-------~~~Y~~s  179 (269)
                      +||||||....            ..+++|+.++..+++++.    +.+.+++|++||..+..+.+.       ...|+.+
T Consensus        66 ~vi~~ag~~~~------------~~~~~n~~~~~~l~~a~~----~~~~~~iv~~SS~~~~~~~~~~e~~~~~~~~Y~~s  129 (219)
T 3dqp_A           66 AIINVSGSGGK------------SLLKVDLYGAVKLMQAAE----KAEVKRFILLSTIFSLQPEKWIGAGFDALKDYYIA  129 (219)
T ss_dssp             EEEECCCCTTS------------SCCCCCCHHHHHHHHHHH----HTTCCEEEEECCTTTTCGGGCCSHHHHHTHHHHHH
T ss_pred             EEEECCcCCCC------------CcEeEeHHHHHHHHHHHH----HhCCCEEEEECcccccCCCcccccccccccHHHHH
Confidence            99999997642            167788999888877763    456679999999988877666       7899999


Q ss_pred             HHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCcccc
Q 024338          180 KAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQ  259 (269)
Q Consensus       180 K~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~  259 (269)
                      |.+.+.+.+      ...|++++.++||.+.++.......       .......+.+++|+|+++++++.++.   ..|+
T Consensus       130 K~~~e~~~~------~~~~i~~~ilrp~~v~g~~~~~~~~-------~~~~~~~~i~~~Dva~~i~~~l~~~~---~~g~  193 (219)
T 3dqp_A          130 KHFADLYLT------KETNLDYTIIQPGALTEEEATGLID-------INDEVSASNTIGDVADTIKELVMTDH---SIGK  193 (219)
T ss_dssp             HHHHHHHHH------HSCCCEEEEEEECSEECSCCCSEEE-------ESSSCCCCEEHHHHHHHHHHHHTCGG---GTTE
T ss_pred             HHHHHHHHH------hccCCcEEEEeCceEecCCCCCccc-------cCCCcCCcccHHHHHHHHHHHHhCcc---ccCc
Confidence            999988876      3568999999999999875432211       01234456789999999999996543   4589


Q ss_pred             EEEecCCc
Q 024338          260 VLTIDGGM  267 (269)
Q Consensus       260 ~i~~dgg~  267 (269)
                      ++++++|.
T Consensus       194 ~~~i~~g~  201 (219)
T 3dqp_A          194 VISMHNGK  201 (219)
T ss_dssp             EEEEEECS
T ss_pred             EEEeCCCC
Confidence            99997764

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.91  E-value=1.1e-23  Score=183.20  Aligned_cols=231  Identities=16%  Similarity=0.106  Sum_probs=158.0

Q ss_pred             hcccccCCCCCCEEEEeCCCCchHHHHHHHHHHcC--CcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHH
Q 024338           16 ATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAG--CKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVES   93 (269)
Q Consensus        16 ~~~~~~~~~~~k~vlItGas~giG~~~a~~l~~~G--~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~   93 (269)
                      -..+.++.+.++++|||||+|+||.+++++|+++|  +.|+.+.........+..+.+ ....++.++.+|++|.+++.+
T Consensus        14 ~~~n~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~Dl~d~~~~~~   92 (346)
T 4egb_A           14 GTENLYFQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSI-QDHPNYYFVKGEIQNGELLEH   92 (346)
T ss_dssp             ----------CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTT-TTCTTEEEEECCTTCHHHHHH
T ss_pred             CccccccccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhh-ccCCCeEEEEcCCCCHHHHHH
Confidence            34455667888999999999999999999999999  556554322211111111111 113578999999999999999


Q ss_pred             HHHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCC---
Q 024338           94 MIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGN---  170 (269)
Q Consensus        94 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~---  170 (269)
                      +++..     ++|+|||+|+.....    ...++.+..+++|+.++..+++++..    .+.+++|++||...+...   
T Consensus        93 ~~~~~-----~~d~Vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~v~~SS~~vy~~~~~~  159 (346)
T 4egb_A           93 VIKER-----DVQVIVNFAAESHVD----RSIENPIPFYDTNVIGTVTLLELVKK----YPHIKLVQVSTDEVYGSLGKT  159 (346)
T ss_dssp             HHHHH-----TCCEEEECCCCC-------------CHHHHHHTHHHHHHHHHHHH----STTSEEEEEEEGGGGCCCCSS
T ss_pred             HHhhc-----CCCEEEECCcccchh----hhhhCHHHHHHHHHHHHHHHHHHHHh----cCCCEEEEeCchHHhCCCCcC
Confidence            98863     699999999976432    24456788999999998888887754    466799999997654332   


Q ss_pred             ---------CCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccc--cChHHHHHHHhcCCCC-------
Q 024338          171 ---------IGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAK--LGEDLEKKILEKIPLG-------  232 (269)
Q Consensus       171 ---------~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~--~~~~~~~~~~~~~~~~-------  232 (269)
                               .+...|+.+|.+.+.+++.++.+.   |++++.+.||.+.+|....  ..+.+......+.+..       
T Consensus       160 ~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (346)
T 4egb_A          160 GRFTEETPLAPNSPYSSSKASADMIALAYYKTY---QLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLN  236 (346)
T ss_dssp             CCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEETTSCC
T ss_pred             CCcCCCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeCCCCe
Confidence                     134789999999999999988775   8999999999999886432  2233444444433321       


Q ss_pred             --CCCCHHHHHHHHHHhccCCCCCCccccEEEecCCc
Q 024338          233 --RYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM  267 (269)
Q Consensus       233 --~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg~  267 (269)
                        .+..++|+|++++.++..+.    .|+++++.+|.
T Consensus       237 ~~~~i~v~Dva~a~~~~~~~~~----~g~~~~i~~~~  269 (346)
T 4egb_A          237 VRDWLHVTDHCSAIDVVLHKGR----VGEVYNIGGNN  269 (346)
T ss_dssp             EECEEEHHHHHHHHHHHHHHCC----TTCEEEECCSC
T ss_pred             EEeeEEHHHHHHHHHHHHhcCC----CCCEEEECCCC
Confidence              23469999999999996542    68999998874

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.91  E-value=8.9e-23  Score=180.95  Aligned_cols=228  Identities=14%  Similarity=0.131  Sum_probs=161.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHH-----------------HHHHHHHHHcCCcEEEEEcc
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEA-----------------EEVCKEIEASGGQALTFGGD   84 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~-----------------~~~~~~l~~~~~~~~~~~~D   84 (269)
                      +..+++++|||||+|.||.+++++|+++|++|+++ .|.....                 +.+.+.......++.++.+|
T Consensus         7 ~~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~D   85 (404)
T 1i24_A            7 HHHHGSRVMVIGGDGYCGWATALHLSKKNYEVCIV-DNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGD   85 (404)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESC
T ss_pred             cccCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEE-EecCccccccccccccccccchhhhhhhhHhhccCCceEEEECC
Confidence            44568999999999999999999999999999885 5543321                 11111111224578889999


Q ss_pred             CCCHHHHHHHHHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Q 024338           85 VSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASV  164 (269)
Q Consensus        85 ls~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~  164 (269)
                      ++|.++++++++..     ++|+||||||..... ....+.+.+...+++|+.++..+++++.+.   ....++|++||.
T Consensus        86 l~d~~~~~~~~~~~-----~~D~Vih~A~~~~~~-~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~~~~~V~~SS~  156 (404)
T 1i24_A           86 ICDFEFLAESFKSF-----EPDSVVHFGEQRSAP-YSMIDRSRAVYTQHNNVIGTLNVLFAIKEF---GEECHLVKLGTM  156 (404)
T ss_dssp             TTSHHHHHHHHHHH-----CCSEEEECCSCCCHH-HHTSCHHHHHHHHHHHHHHHHHHHHHHHHH---CTTCEEEEECCG
T ss_pred             CCCHHHHHHHHhcc-----CCCEEEECCCCCCcc-chhhCccchhhhHHHHHHHHHHHHHHHHHh---CCCcEEEEeCcH
Confidence            99999999888765     699999999975422 122355667889999999999999988653   222599999997


Q ss_pred             cccc------------------------CCCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccc----
Q 024338          165 VGLV------------------------GNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAK----  216 (269)
Q Consensus       165 ~~~~------------------------~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~----  216 (269)
                      ..+-                        +.++...|+.||.+.+.+++.++.++   |+++++++||.+.+|....    
T Consensus       157 ~vyg~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ivrp~~v~Gp~~~~~~~~  233 (404)
T 1i24_A          157 GEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVKTDETEMH  233 (404)
T ss_dssp             GGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSCCTTGGGS
T ss_pred             HHhCCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc---CCeEEEEecceeeCCCCCccccc
Confidence            5432                        23345689999999999999998876   8999999999999985421    


Q ss_pred             ---------------cChHHHHHHHhcCCC---------CCCCCHHHHHHHHHHhccCCCCCCccc--cEEEecC
Q 024338          217 ---------------LGEDLEKKILEKIPL---------GRYGQPEEVAGLVEFLALNPAAGYITG--QVLTIDG  265 (269)
Q Consensus       217 ---------------~~~~~~~~~~~~~~~---------~~~~~~~~~a~~~~~l~~~~~~~~~~G--~~i~~dg  265 (269)
                                     ....+......+.+.         ..+.+++|+|++++.++..+.   ..|  +++++.+
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~---~~g~~~~yni~~  305 (404)
T 1i24_A          234 EELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPA---KAGEFRVFNQFT  305 (404)
T ss_dssp             GGGCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCC---CTTCEEEEEECS
T ss_pred             cccccccccccchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcc---cCCCceEEEECC
Confidence                           112333333333221         124579999999999986543   235  6777754

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.91  E-value=3e-23  Score=180.78  Aligned_cols=234  Identities=15%  Similarity=0.072  Sum_probs=170.6

Q ss_pred             hhhhhhcccccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcC-----CcEEEEEccC
Q 024338           11 ATIEQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASG-----GQALTFGGDV   85 (269)
Q Consensus        11 ~~~~~~~~~~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~-----~~~~~~~~Dl   85 (269)
                      .+++..+..  +.+.+|++|||||+|+||.+++++|+++|++|+++ .|+........+.+....     .++.++.+|+
T Consensus        12 ~~~~~~~~~--~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl   88 (351)
T 3ruf_A           12 SRYEEITQQ--LIFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGL-DNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDI   88 (351)
T ss_dssp             HHHHHHHHH--HHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCT
T ss_pred             HHHhhHHhh--CCCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEE-eCCCCCchhhhhhhhhccccccCCceEEEEccC
Confidence            344444443  34468999999999999999999999999999986 454322222233333221     5789999999


Q ss_pred             CCHHHHHHHHHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCc
Q 024338           86 SKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVV  165 (269)
Q Consensus        86 s~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  165 (269)
                      +|.+++.++++       ++|+|||+||.....    ...++.+..+++|+.++..+++++..    .+.+++|++||..
T Consensus        89 ~d~~~~~~~~~-------~~d~Vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~v~~SS~~  153 (351)
T 3ruf_A           89 RDLTTCEQVMK-------GVDHVLHQAALGSVP----RSIVDPITTNATNITGFLNILHAAKN----AQVQSFTYAASSS  153 (351)
T ss_dssp             TCHHHHHHHTT-------TCSEEEECCCCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEGG
T ss_pred             CCHHHHHHHhc-------CCCEEEECCccCCcc----hhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEecHH
Confidence            99998888776       799999999964321    13455678999999999888887754    4567999999987


Q ss_pred             cccCCC-----------CChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc------ChHHHHHHHhc
Q 024338          166 GLVGNI-----------GQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL------GEDLEKKILEK  228 (269)
Q Consensus       166 ~~~~~~-----------~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~------~~~~~~~~~~~  228 (269)
                      .+...+           +...|+.+|.+.+.+++.++.+.   |++++.++|+.+.+|.....      .+.+......+
T Consensus       154 vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~  230 (351)
T 3ruf_A          154 TYGDHPALPKVEENIGNPLSPYAVTKYVNEIYAQVYARTY---GFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKG  230 (351)
T ss_dssp             GGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHT
T ss_pred             hcCCCCCCCCccCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcC
Confidence            653322           35689999999999999988876   89999999999998864322      23344444443


Q ss_pred             CCC---------CCCCCHHHHHHHHHHhccCCCCCCccccEEEecCCc
Q 024338          229 IPL---------GRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM  267 (269)
Q Consensus       229 ~~~---------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg~  267 (269)
                      .+.         ..+.+++|+|++++.++..+.  ...|+++++.+|.
T Consensus       231 ~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~--~~~~~~~ni~~~~  276 (351)
T 3ruf_A          231 DDVYINGDGETSRDFCYIDNVIQMNILSALAKD--SAKDNIYNVAVGD  276 (351)
T ss_dssp             CCCEEESSSCCEECCEEHHHHHHHHHHHHTCCG--GGCSEEEEESCSC
T ss_pred             CCcEEeCCCCeEEeeEEHHHHHHHHHHHHhhcc--ccCCCEEEeCCCC
Confidence            322         134579999999999985522  3578999997764

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.91  E-value=2.9e-24  Score=177.41  Aligned_cols=191  Identities=17%  Similarity=0.161  Sum_probs=134.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcC-CcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAG-CKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G-~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      +..|++|||||+|+||++++++|+++| ++|+++ .|+++.+.++      ...++.++.+|++|.++++++++      
T Consensus        21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~-~R~~~~~~~~------~~~~~~~~~~Dl~d~~~~~~~~~------   87 (236)
T 3qvo_A           21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLF-ARQPAKIHKP------YPTNSQIIMGDVLNHAALKQAMQ------   87 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEE-ESSGGGSCSS------CCTTEEEEECCTTCHHHHHHHHT------
T ss_pred             CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEE-EcChhhhccc------ccCCcEEEEecCCCHHHHHHHhc------
Confidence            345899999999999999999999999 888874 6776544321      13468899999999999988876      


Q ss_pred             CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCC---------
Q 024338          103 GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQ---------  173 (269)
Q Consensus       103 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~---------  173 (269)
                       .+|+||||+|...        .              ...++.+++.|++.+.++||++||...+.+.++.         
T Consensus        88 -~~D~vv~~a~~~~--------~--------------~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~~  144 (236)
T 3qvo_A           88 -GQDIVYANLTGED--------L--------------DIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAVI  144 (236)
T ss_dssp             -TCSEEEEECCSTT--------H--------------HHHHHHHHHHHHHTTCCEEEEECCCCC----------------
T ss_pred             -CCCEEEEcCCCCc--------h--------------hHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhcc
Confidence             7899999998421        0              1235678888888888999999998877655442         


Q ss_pred             ----hhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCC-CCCCCCHHHHHHHHHHhc
Q 024338          174 ----ANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIP-LGRYGQPEEVAGLVEFLA  248 (269)
Q Consensus       174 ----~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~~l~  248 (269)
                          ..|..+|           ..+.+.||+++.|+||++.++.......     .....+ .+++.+++|+|+++++++
T Consensus       145 ~~~~~~~~~~~-----------~~l~~~gi~~~~vrPg~i~~~~~~~~~~-----~~~~~~~~~~~i~~~DvA~~i~~ll  208 (236)
T 3qvo_A          145 GEPLKPFRRAA-----------DAIEASGLEYTILRPAWLTDEDIIDYEL-----TSRNEPFKGTIVSRKSVAALITDII  208 (236)
T ss_dssp             CGGGHHHHHHH-----------HHHHTSCSEEEEEEECEEECCSCCCCEE-----ECTTSCCSCSEEEHHHHHHHHHHHH
T ss_pred             cchHHHHHHHH-----------HHHHHCCCCEEEEeCCcccCCCCcceEE-----eccCCCCCCcEECHHHHHHHHHHHH
Confidence                2233322           2334679999999999999875432110     011112 355678999999999999


Q ss_pred             cCCCCCCccccEEEecCCcc
Q 024338          249 LNPAAGYITGQVLTIDGGMV  268 (269)
Q Consensus       249 ~~~~~~~~~G~~i~~dgg~~  268 (269)
                      +++ ..++ |+++.++++.+
T Consensus       209 ~~~-~~~~-g~~~~i~~~~~  226 (236)
T 3qvo_A          209 DKP-EKHI-GENIGINQPGT  226 (236)
T ss_dssp             HST-TTTT-TEEEEEECSSC
T ss_pred             cCc-cccc-CeeEEecCCCC
Confidence            654 3344 89999988754

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.91  E-value=6.8e-24  Score=221.47  Aligned_cols=179  Identities=25%  Similarity=0.240  Sum_probs=142.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHH---HHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSK---EAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~---~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      .+|++|||||++|||+++|+.|+++|++++++.+|+..   ...+..++++..+.++.++.||++|.++++++++++. .
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~-~ 1961 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEAT-Q 1961 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHH-H
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHH-h
Confidence            68999999999999999999999999985555677643   3345666676667889999999999999999999987 4


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKA  181 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  181 (269)
                      +++||+||||||+....++.+++.++|++.+++|+.|++++.+.+.+.|.+  .++||++||..+..+.+++..|+++|+
T Consensus      1962 ~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~--~g~iV~iSS~ag~~g~~g~~~Y~aaKa 2039 (2512)
T 2vz8_A         1962 LGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPE--LDYFVIFSSVSCGRGNAGQANYGFANS 2039 (2512)
T ss_dssp             HSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTT--CCEEEEECCHHHHTTCTTCHHHHHHHH
T ss_pred             cCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhccc--CCEEEEecchhhcCCCCCcHHHHHHHH
Confidence            799999999999887788899999999999999999999999999998843  489999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCeEEEEEecCCcc
Q 024338          182 GVIGLTKTVAKEYASRNINVNAIAPGFIA  210 (269)
Q Consensus       182 al~~~~~~la~e~~~~gi~v~~v~pG~v~  210 (269)
                      ++++|++..+.+    |+...++.+|.+.
T Consensus      2040 al~~l~~~rr~~----Gl~~~a~~~g~~~ 2064 (2512)
T 2vz8_A         2040 AMERICEKRRHD----GLPGLAVQWGAIG 2064 (2512)
T ss_dssp             HHHHHHHHHHHT----TSCCCEEEECCBC
T ss_pred             HHHHHHHHHHHC----CCcEEEEEccCcC
Confidence            999999976654    7888888887654

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.91  E-value=1.4e-23  Score=187.95  Aligned_cols=217  Identities=12%  Similarity=0.088  Sum_probs=156.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHH---HHHHHHHHHHHc---------CCcEEEEEccCCCHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSK---EAEEVCKEIEAS---------GGQALTFGGDVSKEA   89 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~---~~~~~~~~l~~~---------~~~~~~~~~Dls~~~   89 (269)
                      ....+|++|||||+|+||.+++++|+++|++|+++ .|+.+   ..+++.+.+...         ..++.++.+|++|.+
T Consensus        65 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~-~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~  143 (427)
T 4f6c_A           65 SHRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCF-IRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMD  143 (427)
T ss_dssp             CCCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEE-EECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---C
T ss_pred             CCCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEE-ECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcc
Confidence            44567899999999999999999999999999986 45544   334444443322         467999999999988


Q ss_pred             HHHHHHHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcc---
Q 024338           90 DVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVG---  166 (269)
Q Consensus        90 ~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~---  166 (269)
                      ++.        .++++|+||||||....       .+.+++.+++|+.++..+++++.+     +.+++|++||...   
T Consensus       144 ~l~--------~~~~~d~Vih~A~~~~~-------~~~~~~~~~~Nv~g~~~l~~aa~~-----~~~~~v~~SS~~~G~~  203 (427)
T 4f6c_A          144 DVV--------LPENMDTIIHAGARTDH-------FGDDDEFEKVNVQGTVDVIRLAQQ-----HHARLIYVSTISVGTY  203 (427)
T ss_dssp             CCC--------CSSCCSEEEECCCCC--------------CHHHHHHHHHHHHHHHHHH-----TTCEEEEEEEGGGGSE
T ss_pred             cCC--------CcCCCCEEEECCcccCC-------CCCHHHHHHHHHHHHHHHHHHHHh-----cCCcEEEECchHhCCC
Confidence            777        45689999999997532       246788999999999999998876     4579999999877   


Q ss_pred             ---------------ccCCCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc---------ChHHH
Q 024338          167 ---------------LVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL---------GEDLE  222 (269)
Q Consensus       167 ---------------~~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~---------~~~~~  222 (269)
                                     ..+.++...|+.+|++.+.+++.++.    .|++++.+.||.+.++.....         ...+.
T Consensus       204 ~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~  279 (427)
T 4f6c_A          204 FDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVM  279 (427)
T ss_dssp             ECSSCSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHH----TTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHH
T ss_pred             ccCCCCCccccccccccCCCCCCchHHHHHHHHHHHHHHHH----cCCCEEEEeCCeeecCCCCCccccCcchHHHHHHH
Confidence                           01123677899999999999888653    589999999999998865432         11222


Q ss_pred             HHHHhcCC--------CCCCCCHHHHHHHHHHhccCCCCCCccccEEEecCCc
Q 024338          223 KKILEKIP--------LGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM  267 (269)
Q Consensus       223 ~~~~~~~~--------~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg~  267 (269)
                      .......+        ...+.+++|+|+++++++..+.    .|+++++++|.
T Consensus       280 ~~~~~~~~~~~~~~~~~~~~v~v~DvA~ai~~~~~~~~----~g~~~~l~~~~  328 (427)
T 4f6c_A          280 NDLLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT----PQIIYHVLSPN  328 (427)
T ss_dssp             HHHHHSSEEEHHHHTCEECCEEHHHHHHHHHHHTTSCC----CCSEEEESCSC
T ss_pred             HHHHhcCCCCCccccceEEEeeHHHHHHHHHHHHcCCC----CCCEEEecCCC
Confidence            22222211        1236689999999999985542    78999998874

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.91  E-value=2e-23  Score=184.10  Aligned_cols=219  Identities=16%  Similarity=0.010  Sum_probs=161.8

Q ss_pred             ccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHH
Q 024338           20 AAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAV   99 (269)
Q Consensus        20 ~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~   99 (269)
                      ..++.+++++|||||+|+||.+++++|+++|++|+++ .|+.......      ...++.++.+|++|.++++++++   
T Consensus        23 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~------~~~~v~~~~~Dl~d~~~~~~~~~---   92 (379)
T 2c5a_A           23 QYWPSENLKISITGAGGFIASHIARRLKHEGHYVIAS-DWKKNEHMTE------DMFCDEFHLVDLRVMENCLKVTE---   92 (379)
T ss_dssp             CSCTTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ESSCCSSSCG------GGTCSEEEECCTTSHHHHHHHHT---
T ss_pred             ccccccCCeEEEECCccHHHHHHHHHHHHCCCeEEEE-ECCCccchhh------ccCCceEEECCCCCHHHHHHHhC---
Confidence            3345567899999999999999999999999999885 5554322111      12357789999999998888775   


Q ss_pred             HhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcccc-----------
Q 024338          100 DAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLV-----------  168 (269)
Q Consensus       100 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~-----------  168 (269)
                          ++|+|||+|+......+   ..+++++.+++|+.++..+++++..    .+.+++|++||...+.           
T Consensus        93 ----~~d~Vih~A~~~~~~~~---~~~~~~~~~~~Nv~g~~~ll~a~~~----~~~~~~V~~SS~~v~~~~~~~~~~~~~  161 (379)
T 2c5a_A           93 ----GVDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMIEAARI----NGIKRFFYASSACIYPEFKQLETTNVS  161 (379)
T ss_dssp             ----TCSEEEECCCCCCCHHH---HTTCHHHHHHHHHHHHHHHHHHHHH----TTCSEEEEEEEGGGSCGGGSSSSSSCE
T ss_pred             ----CCCEEEECceecCcccc---cccCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEeehheeCCCCCCCccCCC
Confidence                79999999997543111   1245788999999999999988854    4567999999976543           


Q ss_pred             -------CCCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc------ChHHHHHHHhcCC-----
Q 024338          169 -------GNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL------GEDLEKKILEKIP-----  230 (269)
Q Consensus       169 -------~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~------~~~~~~~~~~~~~-----  230 (269)
                             +..+...|+.+|.+.+.+++.++.++   |++++.++||.+.+|.....      ...+........+     
T Consensus       162 ~~E~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (379)
T 2c5a_A          162 LKESDAWPAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMW  238 (379)
T ss_dssp             ECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEE
T ss_pred             cCcccCCCCCCCChhHHHHHHHHHHHHHHHHHH---CCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEe
Confidence                   23346689999999999999988765   79999999999999864321      2233333333222     


Q ss_pred             -----CCCCCCHHHHHHHHHHhccCCCCCCccccEEEecCCc
Q 024338          231 -----LGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM  267 (269)
Q Consensus       231 -----~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg~  267 (269)
                           ...+.+++|+|++++.++..+     .|+++++.+|.
T Consensus       239 g~g~~~~~~i~v~Dva~ai~~~l~~~-----~~~~~ni~~~~  275 (379)
T 2c5a_A          239 GDGLQTRSFTFIDECVEGVLRLTKSD-----FREPVNIGSDE  275 (379)
T ss_dssp             SCSCCEECCEEHHHHHHHHHHHHHSS-----CCSCEEECCCC
T ss_pred             CCCCeeEEEEEHHHHHHHHHHHhhcc-----CCCeEEeCCCC
Confidence                 123557999999999998543     46788887764

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.91  E-value=1.7e-23  Score=181.36  Aligned_cols=218  Identities=18%  Similarity=0.178  Sum_probs=150.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHc---CCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS---GGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      .++|++|||||+|+||.+++++|+++|++|+++ .|+.+...+.. .+...   ..++.++.+|++|.++++++++    
T Consensus         3 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~-~r~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----   76 (337)
T 2c29_D            3 SQSETVCVTGASGFIGSWLVMRLLERGYTVRAT-VRDPTNVKKVK-HLLDLPKAETHLTLWKADLADEGSFDEAIK----   76 (337)
T ss_dssp             ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEE-ESCTTCHHHHH-HHHTSTTHHHHEEEEECCTTSTTTTHHHHT----
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEE-ECCcchhHHHH-HHHhcccCCCeEEEEEcCCCCHHHHHHHHc----
Confidence            468999999999999999999999999999875 55544322221 11111   1358889999999988887775    


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCC----------
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGN----------  170 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~----------  170 (269)
                         ++|+|||+|+...   ..  ..+..++.+++|+.++.++++++.+..   ..++||++||..+..+.          
T Consensus        77 ---~~d~Vih~A~~~~---~~--~~~~~~~~~~~nv~gt~~ll~a~~~~~---~~~riV~~SS~~~~~~~~~~~~~~~E~  145 (337)
T 2c29_D           77 ---GCTGVFHVATPMD---FE--SKDPENEVIKPTIEGMLGIMKSCAAAK---TVRRLVFTSSAGTVNIQEHQLPVYDES  145 (337)
T ss_dssp             ---TCSEEEECCCCCC---SS--CSSHHHHTHHHHHHHHHHHHHHHHHHS---CCCEEEEECCGGGTSCSSSCCSEECTT
T ss_pred             ---CCCEEEEeccccC---CC--CCChHHHHHHHHHHHHHHHHHHHHhCC---CccEEEEeeeHhhcccCCCCCcccCcc
Confidence               6899999998542   11  122346789999999999999887632   35799999998754321          


Q ss_pred             ------------CCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHH---Hhc-------
Q 024338          171 ------------IGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKI---LEK-------  228 (269)
Q Consensus       171 ------------~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~---~~~-------  228 (269)
                                  +....|+.||.+.+.+++.++.+   .|++++.++|+.+.+|.............   ..+       
T Consensus       146 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~  222 (337)
T 2c29_D          146 CWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKE---NNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSI  222 (337)
T ss_dssp             CCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---HTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGGGHHH
T ss_pred             cCCchhhhcccCCccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCccccc
Confidence                        12346999999998888776654   38999999999999986543222111110   001       


Q ss_pred             CCCCCCCCHHHHHHHHHHhccCCCCCCccccEEEec
Q 024338          229 IPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTID  264 (269)
Q Consensus       229 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~d  264 (269)
                      .+..++.+++|+|+++++++..+.   ..|.++..+
T Consensus       223 ~~~~~~i~v~Dva~a~~~~~~~~~---~~~~~~~~~  255 (337)
T 2c29_D          223 IRQGQFVHLDDLCNAHIYLFENPK---AEGRYICSS  255 (337)
T ss_dssp             HTEEEEEEHHHHHHHHHHHHHCTT---CCEEEEECC
T ss_pred             cCCCCEEEHHHHHHHHHHHhcCcc---cCceEEEeC
Confidence            012236789999999999985432   345544333

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.91  E-value=6.2e-24  Score=186.06  Aligned_cols=219  Identities=13%  Similarity=0.069  Sum_probs=154.9

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHH--cCCcEEEEecCCHHHHH-------HHHHHHHHcCCcEEEEEccCCCHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGK--AGCKVLVNYARSSKEAE-------EVCKEIEASGGQALTFGGDVSKEADV   91 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~--~G~~v~i~~~r~~~~~~-------~~~~~l~~~~~~~~~~~~Dls~~~~~   91 (269)
                      .+++++|++|||||+|+||.+++++|++  +|++|+++ .|+.....       .+.......+.++.++.+|++|.+++
T Consensus         5 ~~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~   83 (362)
T 3sxp_A            5 DDELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVL-DKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDL   83 (362)
T ss_dssp             SCCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEE-ECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHH
T ss_pred             chhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEE-ECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHH
Confidence            4678899999999999999999999999  99999986 44332100       00000011234568899999999988


Q ss_pred             HHHHHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCC-
Q 024338           92 ESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGN-  170 (269)
Q Consensus        92 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~-  170 (269)
                      +++      ...++|+||||||....      +.++++..+++|+.++..+++++..    . +.++|++||...+-.. 
T Consensus        84 ~~~------~~~~~D~vih~A~~~~~------~~~~~~~~~~~Nv~gt~~ll~aa~~----~-~~~~V~~SS~~vyg~~~  146 (362)
T 3sxp_A           84 RRL------EKLHFDYLFHQAAVSDT------TMLNQELVMKTNYQAFLNLLEIARS----K-KAKVIYASSAGVYGNTK  146 (362)
T ss_dssp             HHH------TTSCCSEEEECCCCCGG------GCCCHHHHHHHHTHHHHHHHHHHHH----T-TCEEEEEEEGGGGCSCC
T ss_pred             HHh------hccCCCEEEECCccCCc------cccCHHHHHHHHHHHHHHHHHHHHH----c-CCcEEEeCcHHHhCCCC
Confidence            876      23589999999995432      3356789999999999999988843    3 3459999996543221 


Q ss_pred             ---------CCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccc------cChHHHHHHHhcCCC----
Q 024338          171 ---------IGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAK------LGEDLEKKILEKIPL----  231 (269)
Q Consensus       171 ---------~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~------~~~~~~~~~~~~~~~----  231 (269)
                               .+...|+.+|.+.+.+++.++.+     +++..+.|+.+..|....      ....+......+.+.    
T Consensus       147 ~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (362)
T 3sxp_A          147 APNVVGKNESPENVYGFSKLCMDEFVLSHSND-----NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFE  221 (362)
T ss_dssp             SSBCTTSCCCCSSHHHHHHHHHHHHHHHTTTT-----SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSG
T ss_pred             CCCCCCCCCCCCChhHHHHHHHHHHHHHHhcc-----CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEEC
Confidence                     23456999999999988877654     778888888888775432      123333333333222    


Q ss_pred             -----CCCCCHHHHHHHHHHhccCCCCCCccccEEEecCCc
Q 024338          232 -----GRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM  267 (269)
Q Consensus       232 -----~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg~  267 (269)
                           ..+.+++|+|+++++++..+    .+| ++++++|.
T Consensus       222 ~g~~~~~~i~v~Dva~ai~~~~~~~----~~g-~~~i~~~~  257 (362)
T 3sxp_A          222 FGEQLRDFVYIEDVIQANVKAMKAQ----KSG-VYNVGYSQ  257 (362)
T ss_dssp             GGCCEEECEEHHHHHHHHHHHTTCS----SCE-EEEESCSC
T ss_pred             CCCeEEccEEHHHHHHHHHHHHhcC----CCC-EEEeCCCC
Confidence                 12456999999999999643    257 89888764

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.91  E-value=1.9e-23  Score=181.71  Aligned_cols=215  Identities=15%  Similarity=0.104  Sum_probs=159.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHc--CCcEEEEecCCHH-HHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           27 PVAVVTGASRGIGRAVATSLGKA--GCKVLVNYARSSK-EAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~--G~~v~i~~~r~~~-~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      |++|||||+|+||.+++++|+++  |++|+++ .|+.. ...+..+++  ...++.++.+|++|.+++.++++       
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~-~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~-------   74 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVL-DKLTYAGNKANLEAI--LGDRVELVVGDIADAELVDKLAA-------   74 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEE-ECCCTTCCGGGTGGG--CSSSEEEEECCTTCHHHHHHHHT-------
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEE-eCCCCCCChhHHhhh--ccCCeEEEECCCCCHHHHHHHhh-------
Confidence            68999999999999999999999  8999885 44321 111111111  13578899999999998888776       


Q ss_pred             CccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcccc---------------
Q 024338          104 TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLV---------------  168 (269)
Q Consensus       104 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~---------------  168 (269)
                      .+|+|||+||....    +.+.++++..+++|+.++..+++++.+.    + .++|++||...+-               
T Consensus        75 ~~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~----~-~~~v~~SS~~vyg~~~~~~~~~~~~~~~  145 (348)
T 1oc2_A           75 KADAIVHYAAESHN----DNSLNDPSPFIHTNFIGTYTLLEAARKY----D-IRFHHVSTDEVYGDLPLREDLPGHGEGP  145 (348)
T ss_dssp             TCSEEEECCSCCCH----HHHHHCCHHHHHHHTHHHHHHHHHHHHH----T-CEEEEEEEGGGGCCBCCGGGSTTTTCST
T ss_pred             cCCEEEECCcccCc----cchhhCHHHHHHHHHHHHHHHHHHHHHh----C-CeEEEecccceeCCCccccccccccccc
Confidence            56999999996532    1123456789999999999999999874    3 3999999976431               


Q ss_pred             --------CCCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccc--cChHHHHHHHhcCCC-------
Q 024338          169 --------GNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAK--LGEDLEKKILEKIPL-------  231 (269)
Q Consensus       169 --------~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~--~~~~~~~~~~~~~~~-------  231 (269)
                              +.++...|+.+|.+.+.+++.++.++   |++++.++||.+.+|....  ..+.+......+.+.       
T Consensus       146 ~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (348)
T 1oc2_A          146 GEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGK  222 (348)
T ss_dssp             TSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSC
T ss_pred             CCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCceEecCCC
Confidence                    23456789999999999999998876   7999999999999987532  122333333333221       


Q ss_pred             --CCCCCHHHHHHHHHHhccCCCCCCccccEEEecCCc
Q 024338          232 --GRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM  267 (269)
Q Consensus       232 --~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg~  267 (269)
                        ..+.+++|+|+++++++..+    .+|+++++++|.
T Consensus       223 ~~~~~i~v~Dva~~~~~~~~~~----~~g~~~~i~~~~  256 (348)
T 1oc2_A          223 NVRDWIHTNDHSTGVWAILTKG----RMGETYLIGADG  256 (348)
T ss_dssp             CEEECEEHHHHHHHHHHHHHHC----CTTCEEEECCSC
T ss_pred             ceEeeEEHHHHHHHHHHHhhCC----CCCCeEEeCCCC
Confidence              24567999999999998542    378999999874

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.90  E-value=2.9e-23  Score=180.58  Aligned_cols=214  Identities=12%  Similarity=0.059  Sum_probs=153.9

Q ss_pred             ccccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHH
Q 024338           18 NEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKT   97 (269)
Q Consensus        18 ~~~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~   97 (269)
                      .....+.++|+||||||+|+||.++++.|+++|++|+++ .|+.+.            .++.++.+|++|.+++.++++ 
T Consensus        11 ~~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~-~r~~~~------------~~~~~~~~Dl~d~~~~~~~~~-   76 (347)
T 4id9_A           11 SSGLVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGF-DLRPSG------------TGGEEVVGSLEDGQALSDAIM-   76 (347)
T ss_dssp             ----------CEEEETTTSHHHHHHHHHHHHTTCCEEEE-ESSCCS------------SCCSEEESCTTCHHHHHHHHT-
T ss_pred             CCcccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEE-eCCCCC------------CCccEEecCcCCHHHHHHHHh-
Confidence            334567788999999999999999999999999999986 555432            356789999999999888776 


Q ss_pred             HHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcccc---------
Q 024338           98 AVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLV---------  168 (269)
Q Consensus        98 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~---------  168 (269)
                            ++|+|||+|+....      +.+.++..+++|+.++..+++++..    .+.+++|++||...+-         
T Consensus        77 ------~~d~vih~A~~~~~------~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~V~~SS~~vyg~~~~~~~~~  140 (347)
T 4id9_A           77 ------GVSAVLHLGAFMSW------APADRDRMFAVNVEGTRRLLDAASA----AGVRRFVFASSGEVYPENRPEFLPV  140 (347)
T ss_dssp             ------TCSEEEECCCCCCS------SGGGHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGTTTTSCSSSSB
T ss_pred             ------CCCEEEECCcccCc------chhhHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEECCHHHhCCCCCCCCCc
Confidence                  79999999996543      2345589999999998888887754    5667999999965432         


Q ss_pred             ----CCCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCcc-------------CCcccc-------------cC
Q 024338          169 ----GNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIA-------------SDMTAK-------------LG  218 (269)
Q Consensus       169 ----~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~-------------t~~~~~-------------~~  218 (269)
                          +..+...|+.+|.+.+.+++.++.+.   |++++.+.|+.+.             +|....             ..
T Consensus       141 ~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~  217 (347)
T 4id9_A          141 TEDHPLCPNSPYGLTKLLGEELVRFHQRSG---AMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAI  217 (347)
T ss_dssp             CTTSCCCCCSHHHHHHHHHHHHHHHHHHHS---SSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHH
T ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHhc---CCceEEEccceEeecccccccccccCCCCcccccccccccccchhHH
Confidence                23456789999999999999888774   8999999999998             332111             11


Q ss_pred             hHHHHHHHhcCC---------CCCC----CCHHHHHHHHHHhccCCCCCCccccEEEecCCc
Q 024338          219 EDLEKKILEKIP---------LGRY----GQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM  267 (269)
Q Consensus       219 ~~~~~~~~~~~~---------~~~~----~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg~  267 (269)
                      ..+......+.+         ...+    .+++|+|++++.++..+.   ..|+++++.+|.
T Consensus       218 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~---~~~~~~ni~~~~  276 (347)
T 4id9_A          218 AELLQSRDIGEPSHILARNENGRPFRMHITDTRDMVAGILLALDHPE---AAGGTFNLGADE  276 (347)
T ss_dssp             HHHHHHHCCSSCCEEEEECTTCCBCEECEEEHHHHHHHHHHHHHCGG---GTTEEEEESCSS
T ss_pred             HHHHHHHHcCCCeEEeCCCCcccCCccCcEeHHHHHHHHHHHhcCcc---cCCCeEEECCCC
Confidence            112222222222         1223    678999999999996542   358999998764

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.90  E-value=3.4e-23  Score=179.61  Aligned_cols=209  Identities=15%  Similarity=0.155  Sum_probs=153.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCcc
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVD  106 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id  106 (269)
                      .++|||||+|+||.+++++|+++|++|+++ .|+.+..+++    .  ..++.++.+|++|.+++.++++       ++|
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~l----~--~~~~~~~~~Dl~d~~~~~~~~~-------~~d   79 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLI-HRPSSQIQRL----A--YLEPECRVAEMLDHAGLERALR-------GLD   79 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEE-ECTTSCGGGG----G--GGCCEEEECCTTCHHHHHHHTT-------TCS
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEE-ecChHhhhhh----c--cCCeEEEEecCCCHHHHHHHHc-------CCC
Confidence            379999999999999999999999999885 5655433221    1  1257789999999998887765       699


Q ss_pred             EEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCC--------------
Q 024338          107 ILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIG--------------  172 (269)
Q Consensus       107 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~--------------  172 (269)
                      +|||+||...      ...+++++.+++|+.++..+++++.+.    +.+++|++||...+.+.+.              
T Consensus        80 ~vih~a~~~~------~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~  149 (342)
T 2x4g_A           80 GVIFSAGYYP------SRPRRWQEEVASALGQTNPFYAACLQA----RVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLP  149 (342)
T ss_dssp             EEEEC------------------CHHHHHHHHHHHHHHHHHHH----TCSCEEEECCGGGSCCCTTSSCBCTTCCCSSCC
T ss_pred             EEEECCccCc------CCCCCHHHHHHHHHHHHHHHHHHHHHc----CCCeEEEECCHHhhCcCCCCCCCCCCCCCCccc
Confidence            9999999643      134567889999999999999988763    4579999999877654443              


Q ss_pred             --ChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcc-cccChHHHHHHHhcCCC------CCCCCHHHHHHH
Q 024338          173 --QANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMT-AKLGEDLEKKILEKIPL------GRYGQPEEVAGL  243 (269)
Q Consensus       173 --~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~-~~~~~~~~~~~~~~~~~------~~~~~~~~~a~~  243 (269)
                        ...|+.+|.+.+.+++.++.   + |++++.++||.+.++.. +.....+......+.+.      ..+.+++|+|++
T Consensus       150 ~~~~~Y~~sK~~~e~~~~~~~~---~-g~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~  225 (342)
T 2x4g_A          150 SGKSSYVLCKWALDEQAREQAR---N-GLPVVIGIPGMVLGELDIGPTTGRVITAIGNGEMTHYVAGQRNVIDAAEAGRG  225 (342)
T ss_dssp             TTSCHHHHHHHHHHHHHHHHHH---T-TCCEEEEEECEEECSCCSSCSTTHHHHHHHTTCCCEEECCEEEEEEHHHHHHH
T ss_pred             cccChHHHHHHHHHHHHHHHhh---c-CCcEEEEeCCceECCCCccccHHHHHHHHHcCCCccccCCCcceeeHHHHHHH
Confidence              67899999999999998875   3 89999999999999865 21133344444343221      125589999999


Q ss_pred             HHHhccCCCCCCccccEEEecCCc
Q 024338          244 VEFLALNPAAGYITGQVLTIDGGM  267 (269)
Q Consensus       244 ~~~l~~~~~~~~~~G~~i~~dgg~  267 (269)
                      +++++..+.    .|+++++++|.
T Consensus       226 ~~~~~~~~~----~g~~~~v~~~~  245 (342)
T 2x4g_A          226 LLMALERGR----IGERYLLTGHN  245 (342)
T ss_dssp             HHHHHHHSC----TTCEEEECCEE
T ss_pred             HHHHHhCCC----CCceEEEcCCc
Confidence            999986532    28999998874

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.90  E-value=1.9e-23  Score=179.19  Aligned_cols=210  Identities=16%  Similarity=0.175  Sum_probs=155.5

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHH-HHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCcc
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSK-EAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVD  106 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~-~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id  106 (269)
                      ++|||||+|+||.+++++|+++|++|+++ .|..+ ..+.    +   ..++.++.+|++|.+++++++++.     ++|
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~-~r~~~~~~~~----~---~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d   68 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLEVAVL-DNLATGKREN----V---PKGVPFFRVDLRDKEGVERAFREF-----RPT   68 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEE-CCCSSCCGGG----S---CTTCCEECCCTTCHHHHHHHHHHH-----CCS
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEE-ECCCcCchhh----c---ccCeEEEECCCCCHHHHHHHHHhc-----CCC
Confidence            69999999999999999999999999885 55321 1111    1   134667899999999999888752     789


Q ss_pred             EEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccC-------------CCCC
Q 024338          107 ILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVG-------------NIGQ  173 (269)
Q Consensus       107 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~-------------~~~~  173 (269)
                      +|||+|+.....    .+.++++..+++|+.++..+++++..    .+.+++|++||..+..+             ..+.
T Consensus        69 ~vi~~a~~~~~~----~~~~~~~~~~~~N~~g~~~l~~a~~~----~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~  140 (311)
T 2p5y_A           69 HVSHQAAQASVK----VSVEDPVLDFEVNLLGGLNLLEACRQ----YGVEKLVFASTGGAIYGEVPEGERAEETWPPRPK  140 (311)
T ss_dssp             EEEECCSCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCC
T ss_pred             EEEECccccCch----hhhhCHHHHHHHHHHHHHHHHHHHHH----hCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCC
Confidence            999999964321    23456788999999999999988753    45679999999822211             1245


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC-----hHHHHHHHhcCC--------------CCCC
Q 024338          174 ANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG-----EDLEKKILEKIP--------------LGRY  234 (269)
Q Consensus       174 ~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~-----~~~~~~~~~~~~--------------~~~~  234 (269)
                      ..|+.||++.+.+++.++.++   |++++.++||.+.+|......     +.+......+.+              .+.+
T Consensus       141 ~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  217 (311)
T 2p5y_A          141 SPYAASKAAFEHYLSVYGQSY---GLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDY  217 (311)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECE
T ss_pred             ChHHHHHHHHHHHHHHHHHHc---CCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEee
Confidence            689999999999999998775   799999999999998653321     222333323222              1234


Q ss_pred             CCHHHHHHHHHHhccCCCCCCccccEEEecCCc
Q 024338          235 GQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM  267 (269)
Q Consensus       235 ~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg~  267 (269)
                      .+++|+|+++++++..+      |+++++++|.
T Consensus       218 i~v~Dva~a~~~~~~~~------~~~~~i~~~~  244 (311)
T 2p5y_A          218 VYVGDVAEAHALALFSL------EGIYNVGTGE  244 (311)
T ss_dssp             EEHHHHHHHHHHHHHHC------CEEEEESCSC
T ss_pred             EEHHHHHHHHHHHHhCC------CCEEEeCCCC
Confidence            57999999999998542      7899998774

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.90  E-value=4e-23  Score=178.45  Aligned_cols=193  Identities=11%  Similarity=0.056  Sum_probs=153.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHH-HcCCcEEEEecCCH-----------HHHHHHHHHHHHcCCcEEEEEccCCCHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLG-KAGCKVLVNYARSS-----------KEAEEVCKEIEASGGQALTFGGDVSKEA   89 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~-~~G~~v~i~~~r~~-----------~~~~~~~~~l~~~~~~~~~~~~Dls~~~   89 (269)
                      ....+|++||||||+|||++++..|+ +.|+.++++....+           .....+.+++++.+.+...+.||++|++
T Consensus        46 ~~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e  125 (401)
T 4ggo_A           46 GAKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDE  125 (401)
T ss_dssp             TSCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHH
T ss_pred             ccCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHH
Confidence            35678999999999999999999999 68999887533322           1244566777888999999999999999


Q ss_pred             HHHHHHHHHHHhcCCccEEEEccCCCCCC-------------c---------------------ccCCCHHHHHHHHHHH
Q 024338           90 DVESMIKTAVDAWGTVDILINNAGITRDT-------------L---------------------LMRMKKSQWQDVIDLN  135 (269)
Q Consensus        90 ~~~~~~~~~~~~~~~id~li~~ag~~~~~-------------~---------------------~~~~~~~~~~~~~~~n  135 (269)
                      +++++++++.+.+|+||+||||++.....             +                     +...+.++++....+.
T Consensus       126 ~i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~vM  205 (401)
T 4ggo_A          126 IKAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKVM  205 (401)
T ss_dssp             HHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHHH
Confidence            99999999999999999999999965210             0                     1224566777666664


Q ss_pred             ---hHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCC--CChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCcc
Q 024338          136 ---LTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNI--GQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIA  210 (269)
Q Consensus       136 ---~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~--~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~  210 (269)
                         ..+.|...+...++|  ..+++++.+|++.+....|  ..+.++.+|++|+..++.|+.++++  ++++++.||.+.
T Consensus       206 g~s~~s~w~~al~~a~ll--a~G~siva~SYiGse~t~P~Y~~G~mG~AKaaLEa~~r~La~eL~~--~~a~v~v~~a~v  281 (401)
T 4ggo_A          206 GGEDWERWIKQLSKEGLL--EEGCITLAYSYIGPEATQALYRKGTIGKAKEHLEATAHRLNKENPS--IRAFVSVNKGLV  281 (401)
T ss_dssp             SSHHHHHHHHHHHHTTCE--EEEEEEEEEECCCCGGGHHHHTTSHHHHHHHHHHHHHHHHHHHCTT--EEEEEEECCCCC
T ss_pred             hhhHHHHHHHHHHhhhcc--cCCceEEEEeccCcceeecCCCccHHHHHHHHHHHHHHHHHHhcCC--CcEEEEEcCccc
Confidence               444555555555555  4578999999999876555  4568999999999999999999975  899999999999


Q ss_pred             CCcccccC
Q 024338          211 SDMTAKLG  218 (269)
Q Consensus       211 t~~~~~~~  218 (269)
                      |+.....+
T Consensus       282 T~AssaIP  289 (401)
T 4ggo_A          282 TRASAVIP  289 (401)
T ss_dssp             CTTGGGSS
T ss_pred             cchhhcCC
Confidence            99776654

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.90  E-value=9.9e-23  Score=177.17  Aligned_cols=225  Identities=13%  Similarity=0.076  Sum_probs=157.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHH------HHHHHHHHHH-cCCcEEEEEccCCCHHHHHHHHHHH
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKE------AEEVCKEIEA-SGGQALTFGGDVSKEADVESMIKTA   98 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~------~~~~~~~l~~-~~~~~~~~~~Dls~~~~~~~~~~~~   98 (269)
                      +|++|||||+|+||.+++++|+++|++|+++ .|+...      ..+..+++.. .+.++.++.+|++|.+++++++++.
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~   80 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVI-DNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY   80 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEE-ECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEE-ecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhc
Confidence            4789999999999999999999999999986 442211      1111222222 2456788999999999998887752


Q ss_pred             HHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccC---------
Q 024338           99 VDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVG---------  169 (269)
Q Consensus        99 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~---------  169 (269)
                           ++|+|||+||......    ..+++++.+++|+.++..+++++.    +.+.+++|++||...+..         
T Consensus        81 -----~~d~vih~A~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~iv~~SS~~~~g~~~~~~~~E~  147 (348)
T 1ek6_A           81 -----SFMAVIHFAGLKAVGE----SVQKPLDYYRVNLTGTIQLLEIMK----AHGVKNLVFSSSATVYGNPQYLPLDEA  147 (348)
T ss_dssp             -----CEEEEEECCSCCCHHH----HHHCHHHHHHHHHHHHHHHHHHHH----HTTCCEEEEEEEGGGGCSCSSSSBCTT
T ss_pred             -----CCCEEEECCCCcCccc----hhhchHHHHHHHHHHHHHHHHHHH----HhCCCEEEEECcHHHhCCCCCCCcCCC
Confidence                 7999999999653221    335678899999999999888654    355679999999765421         


Q ss_pred             ---CCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcc------------cccChHHHHHHH-hcCC---
Q 024338          170 ---NIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMT------------AKLGEDLEKKIL-EKIP---  230 (269)
Q Consensus       170 ---~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~------------~~~~~~~~~~~~-~~~~---  230 (269)
                         .|....|+.+|.+.+.+++.++.+  ..++++..+.|+.+.+|..            ....+.+..... ...+   
T Consensus       148 ~~~~p~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (348)
T 1ek6_A          148 HPTGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNV  225 (348)
T ss_dssp             SCCCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEE
T ss_pred             CCCCCCCCchHHHHHHHHHHHHHHHhc--CCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEE
Confidence               123678999999999999999887  3469999999998887631            111122222222 1111   


Q ss_pred             ------------CCCCCCHHHHHHHHHHhccCCCCCCccccEEEecCCc
Q 024338          231 ------------LGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM  267 (269)
Q Consensus       231 ------------~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg~  267 (269)
                                  ...+.+++|+|++++.++..+.. ...++++++.+|.
T Consensus       226 ~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~-~~g~~~~ni~~~~  273 (348)
T 1ek6_A          226 FGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKE-QCGCRIYNLGTGT  273 (348)
T ss_dssp             ECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTT-TCCEEEEEECCSC
T ss_pred             eCCcccCCCCceEEeeEEHHHHHHHHHHHHhcccc-cCCceEEEeCCCC
Confidence                        11345789999999998854321 1223889887653

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.90  E-value=7.5e-23  Score=180.20  Aligned_cols=218  Identities=13%  Similarity=0.057  Sum_probs=159.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcC-CcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAG-CKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G-~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      +.++++++|||||+|+||.+++++|+++| ++|+++ .|+.....+   .+. ...++.++.+|++|.++++++++    
T Consensus        28 ~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~-~r~~~~~~~---~l~-~~~~v~~~~~Dl~d~~~l~~~~~----   98 (377)
T 2q1s_A           28 SKLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVV-DNLLSAEKI---NVP-DHPAVRFSETSITDDALLASLQD----   98 (377)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEE-CCCTTCCGG---GSC-CCTTEEEECSCTTCHHHHHHCCS----
T ss_pred             HHhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEE-ECCCCCchh---hcc-CCCceEEEECCCCCHHHHHHHhh----
Confidence            34678999999999999999999999999 999885 555432111   110 13578899999999988776654    


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCCeEEEEcCCcccc-----------
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKK-KKGRIINIASVVGLV-----------  168 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~iv~isS~~~~~-----------  168 (269)
                         ++|+|||+||.....    .+.++.++.+++|+.++..+++++.    +. +.+++|++||...+-           
T Consensus        99 ---~~d~Vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~V~~SS~~vyg~~~~~~~~~~E  167 (377)
T 2q1s_A           99 ---EYDYVFHLATYHGNQ----SSIHDPLADHENNTLTTLKLYERLK----HFKRLKKVVYSAAGCSIAEKTFDDAKATE  167 (377)
T ss_dssp             ---CCSEEEECCCCSCHH----HHHHCHHHHHHHHTHHHHHHHHHHT----TCSSCCEEEEEEEC--------------C
T ss_pred             ---CCCEEEECCCccCch----hhhhCHHHHHHHHHHHHHHHHHHHH----HhCCCCeEEEeCCHHHcCCCCCCCcCccc
Confidence               899999999964321    1234678899999999888888773    34 557999999975421           


Q ss_pred             -----CC-CCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcc---------cc------cChHHHHHHHh
Q 024338          169 -----GN-IGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMT---------AK------LGEDLEKKILE  227 (269)
Q Consensus       169 -----~~-~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~---------~~------~~~~~~~~~~~  227 (269)
                           +. .+...|+.+|.+.+.+++.++.++   |++++.++||.+.++..         ..      ..+.+......
T Consensus       168 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  244 (377)
T 2q1s_A          168 ETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQH---QLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALK  244 (377)
T ss_dssp             CCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHT
T ss_pred             ccccccccCCCCchHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHc
Confidence                 22 456789999999999999988765   89999999999999865         21      12333344444


Q ss_pred             cCCCC---------CCCCHHHHHHH-HHHhccCCCCCCccccEEEecCCc
Q 024338          228 KIPLG---------RYGQPEEVAGL-VEFLALNPAAGYITGQVLTIDGGM  267 (269)
Q Consensus       228 ~~~~~---------~~~~~~~~a~~-~~~l~~~~~~~~~~G~~i~~dgg~  267 (269)
                      +.+..         .+.+++|+|++ ++.++..+.    +| ++++.+|.
T Consensus       245 g~~~~~~g~g~~~~~~i~v~Dva~a~i~~~~~~~~----~g-~~~i~~~~  289 (377)
T 2q1s_A          245 GMPLPLENGGVATRDFIFVEDVANGLIACAADGTP----GG-VYNIASGK  289 (377)
T ss_dssp             TCCCCCSGGGCCEECCEEHHHHHHHHHHHHHHCCT----TE-EEECCCCC
T ss_pred             CCCeEEeCCCCeEEeeEEHHHHHHHHHHHHHhcCC----CC-eEEecCCC
Confidence            43322         24469999999 999986532    68 99988763

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.90  E-value=7.4e-23  Score=177.28  Aligned_cols=212  Identities=14%  Similarity=0.080  Sum_probs=150.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      ..++++++|||||+|+||.+++++|+++|++|+++ .|+.....+   .+.. -.++.++.+|++|.++++++++.    
T Consensus        17 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~---~l~~-~~~~~~~~~Dl~d~~~~~~~~~~----   87 (333)
T 2q1w_A           17 RGSHMKKVFITGICGQIGSHIAELLLERGDKVVGI-DNFATGRRE---HLKD-HPNLTFVEGSIADHALVNQLIGD----   87 (333)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECCSSCCGG---GSCC-CTTEEEEECCTTCHHHHHHHHHH----
T ss_pred             ecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEE-ECCCccchh---hHhh-cCCceEEEEeCCCHHHHHHHHhc----
Confidence            45678999999999999999999999999999986 554321111   1110 14688899999999999988875    


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcccc----CC-------
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLV----GN-------  170 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~----~~-------  170 (269)
                       +++|+||||||.....     +.++++  +++|+.++..+++++.+    .+.++||++||...+.    ..       
T Consensus        88 -~~~D~vih~A~~~~~~-----~~~~~~--~~~N~~~~~~l~~a~~~----~~~~~iV~~SS~~~~g~~~~~~~~~~~E~  155 (333)
T 2q1w_A           88 -LQPDAVVHTAASYKDP-----DDWYND--TLTNCVGGSNVVQAAKK----NNVGRFVYFQTALCYGVKPIQQPVRLDHP  155 (333)
T ss_dssp             -HCCSEEEECCCCCSCT-----TCHHHH--HHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGGCSCCCSSSBCTTSC
T ss_pred             -cCCcEEEECceecCCC-----ccCChH--HHHHHHHHHHHHHHHHH----hCCCEEEEECcHHHhCCCcccCCCCcCCC
Confidence             2799999999975432     223444  99999999999998876    4568999999976653    21       


Q ss_pred             -CCC-hhhHHhHHHHHHHHHH-HHHHhccCCeEEEEEecCCccCCccc-ccChHHHHHHHhc------CCCCCCCCHHHH
Q 024338          171 -IGQ-ANYSAAKAGVIGLTKT-VAKEYASRNINVNAIAPGFIASDMTA-KLGEDLEKKILEK------IPLGRYGQPEEV  240 (269)
Q Consensus       171 -~~~-~~Y~~sK~al~~~~~~-la~e~~~~gi~v~~v~pG~v~t~~~~-~~~~~~~~~~~~~------~~~~~~~~~~~~  240 (269)
                       .+. ..|+.+|.+.+.+++. ++        ++..+.|+.+..|... ...+.+.......      .+...+.+++|+
T Consensus       156 ~~p~~~~Y~~sK~~~E~~~~~s~~--------~~~ilR~~~v~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  227 (333)
T 2q1w_A          156 RNPANSSYAISKSANEDYLEYSGL--------DFVTFRLANVVGPRNVSGPLPIFFQRLSEGKKCFVTKARRDFVFVKDL  227 (333)
T ss_dssp             CCCTTCHHHHHHHHHHHHHHHHTC--------CEEEEEESEEESTTCCSSHHHHHHHHHHTTCCCEEEECEECEEEHHHH
T ss_pred             CCCCCCchHHHHHHHHHHHHhhhC--------CeEEEeeceEECcCCcCcHHHHHHHHHHcCCeeeCCCceEeeEEHHHH
Confidence             233 7899999999998887 54        5677888877776511 1112233222222      122345689999


Q ss_pred             HHHHHHhccCCCCCCccccEEEecCCc
Q 024338          241 AGLVEFLALNPAAGYITGQVLTIDGGM  267 (269)
Q Consensus       241 a~~~~~l~~~~~~~~~~G~~i~~dgg~  267 (269)
                      |+++++++..+.     |+++++++|.
T Consensus       228 a~ai~~~~~~~~-----g~~~~v~~~~  249 (333)
T 2q1w_A          228 ARATVRAVDGVG-----HGAYHFSSGT  249 (333)
T ss_dssp             HHHHHHHHTTCC-----CEEEECSCSC
T ss_pred             HHHHHHHHhcCC-----CCEEEeCCCC
Confidence            999999995432     8999998875

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.89  E-value=5.5e-22  Score=175.52  Aligned_cols=172  Identities=17%  Similarity=0.137  Sum_probs=133.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHH-HcCCcEEEEecCCHHH---------HHHHHHHHHHcC-----Cc---EEEEEccCCC
Q 024338           26 APVAVVTGASRGIGRAVATSLG-KAGCKVLVNYARSSKE---------AEEVCKEIEASG-----GQ---ALTFGGDVSK   87 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~-~~G~~v~i~~~r~~~~---------~~~~~~~l~~~~-----~~---~~~~~~Dls~   87 (269)
                      ++++|||||+|+||.+++++|+ ++|++|+++ .|+...         .+.+.+.+++..     .+   +.++.+|++|
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d   80 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIV-DSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRN   80 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEE-ECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEE-ecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCC
Confidence            4589999999999999999999 999999885 554322         333433333321     24   8889999999


Q ss_pred             HHHHHHHHHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccc
Q 024338           88 EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGL  167 (269)
Q Consensus        88 ~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~  167 (269)
                      .+++++++++    ++++|+||||||......    +.+++++.+++|+.++..+++++..    .+.++||++||...+
T Consensus        81 ~~~~~~~~~~----~~~~d~vih~A~~~~~~~----~~~~~~~~~~~Nv~g~~~ll~a~~~----~~~~~iv~~SS~~v~  148 (397)
T 1gy8_A           81 EDFLNGVFTR----HGPIDAVVHMCAFLAVGE----SVRDPLKYYDNNVVGILRLLQAMLL----HKCDKIIFSSSAAIF  148 (397)
T ss_dssp             HHHHHHHHHH----SCCCCEEEECCCCCCHHH----HHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGT
T ss_pred             HHHHHHHHHh----cCCCCEEEECCCccCcCc----chhhHHHHHHHHhHHHHHHHHHHHH----hCCCEEEEECCHHHh
Confidence            9998887764    456999999999754321    3456788999999999999887643    456799999996544


Q ss_pred             cCCC------------------CChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCc
Q 024338          168 VGNI------------------GQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDM  213 (269)
Q Consensus       168 ~~~~------------------~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~  213 (269)
                      -...                  +...|+.||++.+.+++.++.++   |++++.++|+.+.++.
T Consensus       149 g~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilRp~~v~G~~  209 (397)
T 1gy8_A          149 GNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---GIKGICLRYFNACGAH  209 (397)
T ss_dssp             BSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECCC
T ss_pred             CCCCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH---CCcEEEEeccceeCCC
Confidence            2221                  25789999999999999999887   8999999999998874

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.89  E-value=1.1e-22  Score=174.45  Aligned_cols=210  Identities=15%  Similarity=0.114  Sum_probs=155.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCcc
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVD  106 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id  106 (269)
                      |++|||||+|+||.+++++|+++| .++++..++....+.       ....+.++.+|++| +++.++++       ++|
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g-~~v~~~~~~~~~~~~-------~~~~~~~~~~Dl~~-~~~~~~~~-------~~d   65 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESN-EIVVIDNLSSGNEEF-------VNEAARLVKADLAA-DDIKDYLK-------GAE   65 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTS-CEEEECCCSSCCGGG-------SCTTEEEECCCTTT-SCCHHHHT-------TCS
T ss_pred             CEEEEECCCchHHHHHHHHHHhCC-CEEEEEcCCCCChhh-------cCCCcEEEECcCCh-HHHHHHhc-------CCC
Confidence            579999999999999999999999 555545555432211       13568889999999 88877765       799


Q ss_pred             EEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcccc-----------CCCCChh
Q 024338          107 ILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLV-----------GNIGQAN  175 (269)
Q Consensus       107 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~-----------~~~~~~~  175 (269)
                      +|||+|+....    ..+.+++++.+++|+.++..+++++..    .+.+++|++||...+-           +..+...
T Consensus        66 ~vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~  137 (313)
T 3ehe_A           66 EVWHIAANPDV----RIGAENPDEIYRNNVLATYRLLEAMRK----AGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISL  137 (313)
T ss_dssp             EEEECCCCCCC----C-CCCCHHHHHHHHHHHHHHHHHHHHH----HTCCEEEEECCGGGGCSCSSSSBCTTSCCCCCSH
T ss_pred             EEEECCCCCCh----hhhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEeCchHHhCcCCCCCCCCCCCCCCCCH
Confidence            99999995432    234457789999999999998887543    4567999999977652           3445678


Q ss_pred             hHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccc-cChHHHHHHHhc-CC---------CCCCCCHHHHHHHH
Q 024338          176 YSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAK-LGEDLEKKILEK-IP---------LGRYGQPEEVAGLV  244 (269)
Q Consensus       176 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~-~~~~~~~~~~~~-~~---------~~~~~~~~~~a~~~  244 (269)
                      |+.+|.+.+.+++.++.++   |++++.+.|+.+.+|.... ....+....... .+         ...+..++|+|+++
T Consensus       138 Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~  214 (313)
T 3ehe_A          138 YGASKLACEALIESYCHTF---DMQAWIYRFANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAM  214 (313)
T ss_dssp             HHHHHHHHHHHHHHHHHHT---TCEEEEEECSCEESTTCCCSHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhc---CCCEEEEeeccccCcCCCcChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHH
Confidence            9999999999999998876   8999999999999885432 112233332222 11         12456799999999


Q ss_pred             HHhccCCCCCCccccEEEecCCc
Q 024338          245 EFLALNPAAGYITGQVLTIDGGM  267 (269)
Q Consensus       245 ~~l~~~~~~~~~~G~~i~~dgg~  267 (269)
                      ++++..    ...|+++++.+|.
T Consensus       215 ~~~~~~----~~~~~~~ni~~~~  233 (313)
T 3ehe_A          215 LFGLRG----DERVNIFNIGSED  233 (313)
T ss_dssp             HHHTTC----CSSEEEEECCCSC
T ss_pred             HHHhcc----CCCCceEEECCCC
Confidence            999852    2457899988763

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.89  E-value=2e-23  Score=178.91  Aligned_cols=214  Identities=17%  Similarity=0.048  Sum_probs=157.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCcc
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVD  106 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id  106 (269)
                      +++|||||+|+||.+++++|+++|++|+++ .|+.+...+..      ...+.++.+|++|.+ +.++++       . |
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~------~~~~~~~~~Dl~d~~-~~~~~~-------~-d   64 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVV-DNLSSGRREFV------NPSAELHVRDLKDYS-WGAGIK-------G-D   64 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEE-CCCSSCCGGGS------CTTSEEECCCTTSTT-TTTTCC-------C-S
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEE-eCCCCCchhhc------CCCceEEECccccHH-HHhhcC-------C-C
Confidence            479999999999999999999999999985 55543222111      346788999999977 555443       3 9


Q ss_pred             EEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcccc-----------CCCCChh
Q 024338          107 ILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLV-----------GNIGQAN  175 (269)
Q Consensus       107 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~-----------~~~~~~~  175 (269)
                      +|||+|+....    ..+.++++..+++|+.++..+++++..    .+.+++|++||...+-           +.++...
T Consensus        65 ~vih~A~~~~~----~~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~  136 (312)
T 3ko8_A           65 VVFHFAANPEV----RLSTTEPIVHFNENVVATFNVLEWARQ----TGVRTVVFASSSTVYGDADVIPTPEEEPYKPISV  136 (312)
T ss_dssp             EEEECCSSCSS----SGGGSCHHHHHHHHHHHHHHHHHHHHH----HTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSH
T ss_pred             EEEECCCCCCc----hhhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCCh
Confidence            99999996432    234456788999999999999988854    3567999999977652           2335678


Q ss_pred             hHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccc-cChHHHHHHHhc-CC---C------CCCCCHHHHHHHH
Q 024338          176 YSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAK-LGEDLEKKILEK-IP---L------GRYGQPEEVAGLV  244 (269)
Q Consensus       176 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~-~~~~~~~~~~~~-~~---~------~~~~~~~~~a~~~  244 (269)
                      |+.+|.+.+.+++.++.++   |++++.++||.+.+|.... ....+....... .+   .      ..+.+++|+|+++
T Consensus       137 Y~~sK~~~e~~~~~~~~~~---g~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~  213 (312)
T 3ko8_A          137 YGAAKAAGEVMCATYARLF---GVRCLAVRYANVVGPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEAT  213 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCSSHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHh---CCCEEEEeeccccCcCCCCChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHH
Confidence            9999999999999999887   8999999999999986442 122333333322 11   1      2345699999999


Q ss_pred             HHhccCCCCCCccccEEEecCCc
Q 024338          245 EFLALNPAAGYITGQVLTIDGGM  267 (269)
Q Consensus       245 ~~l~~~~~~~~~~G~~i~~dgg~  267 (269)
                      +.++..+......|+++++.+|.
T Consensus       214 ~~~~~~~~~~~~~~~~~ni~~~~  236 (312)
T 3ko8_A          214 LAAWKKFEEMDAPFLALNVGNVD  236 (312)
T ss_dssp             HHHHHHHHHSCCSEEEEEESCSS
T ss_pred             HHHHHhccccCCCCcEEEEcCCC
Confidence            99986522223568999998764

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.89  E-value=7.8e-23  Score=177.16  Aligned_cols=215  Identities=15%  Similarity=0.166  Sum_probs=157.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHc---C---CcEEEEecCCHH--HHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHH
Q 024338           28 VAVVTGASRGIGRAVATSLGKA---G---CKVLVNYARSSK--EAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAV   99 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~---G---~~v~i~~~r~~~--~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~   99 (269)
                      ++|||||+|+||.+++++|+++   |   ++|+++ .|+..  ..+.+ +.+. ...++.++.+|++|.+++++++    
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~-~r~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~d~~~~~~~~----   74 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVL-DSLTYAGNRANL-APVD-ADPRLRFVHGDIRDAGLLAREL----   74 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEE-ECCCTTCCGGGG-GGGT-TCTTEEEEECCTTCHHHHHHHT----
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEE-ECCCccCchhhh-hhcc-cCCCeEEEEcCCCCHHHHHHHh----
Confidence            5999999999999999999997   8   888885 44321  11111 1111 1357889999999998888776    


Q ss_pred             HhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcccc-----------
Q 024338          100 DAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLV-----------  168 (269)
Q Consensus       100 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~-----------  168 (269)
                         .++|+|||+||.....    .+.+++++.+++|+.++..+++++.+    .+.+++|++||...+-           
T Consensus        75 ---~~~d~Vih~A~~~~~~----~~~~~~~~~~~~Nv~~~~~l~~a~~~----~~~~~~v~~SS~~vyg~~~~~~~~E~~  143 (337)
T 1r6d_A           75 ---RGVDAIVHFAAESHVD----RSIAGASVFTETNVQGTQTLLQCAVD----AGVGRVVHVSTNQVYGSIDSGSWTESS  143 (337)
T ss_dssp             ---TTCCEEEECCSCCCHH----HHHHCCHHHHHHHTHHHHHHHHHHHH----TTCCEEEEEEEGGGGCCCSSSCBCTTS
T ss_pred             ---cCCCEEEECCCccCch----hhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEecchHHhCCCCCCCCCCCC
Confidence               3899999999965321    12345678999999999999998876    3457999999975432           


Q ss_pred             CCCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccc--cChHHHHHHHhcCCC---------CCCCCH
Q 024338          169 GNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAK--LGEDLEKKILEKIPL---------GRYGQP  237 (269)
Q Consensus       169 ~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~--~~~~~~~~~~~~~~~---------~~~~~~  237 (269)
                      +.++...|+.+|.+.+.+++.++.++   |++++.++||.+.+|....  ..+.+......+.+.         ..+.++
T Consensus       144 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  220 (337)
T 1r6d_A          144 PLEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHT  220 (337)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEH
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHH---CCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCCeeEeeEeH
Confidence            23456789999999999999998875   7999999999999986432  112233333332221         134579


Q ss_pred             HHHHHHHHHhccCCCCCCccccEEEecCCc
Q 024338          238 EEVAGLVEFLALNPAAGYITGQVLTIDGGM  267 (269)
Q Consensus       238 ~~~a~~~~~l~~~~~~~~~~G~~i~~dgg~  267 (269)
                      +|+|++++.++..+    .+|+++++++|.
T Consensus       221 ~Dva~a~~~~~~~~----~~g~~~~v~~~~  246 (337)
T 1r6d_A          221 DDHCRGIALVLAGG----RAGEIYHIGGGL  246 (337)
T ss_dssp             HHHHHHHHHHHHHC----CTTCEEEECCCC
T ss_pred             HHHHHHHHHHHhCC----CCCCEEEeCCCC
Confidence            99999999998542    368999998874

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.89  E-value=6.5e-23  Score=176.41  Aligned_cols=216  Identities=17%  Similarity=0.127  Sum_probs=143.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecC-CHHHH---HHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYAR-SSKEA---EEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r-~~~~~---~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      ||++|||||+|+||.+++++|+++|++|+++ .| +++..   ..+ .++.....++.++.+|++|.++++++++     
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~-~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----   73 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTT-IRADPERKRDVSFL-TNLPGASEKLHFFNADLSNPDSFAAAIE-----   73 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEE-CCCC----CCCHHH-HTSTTHHHHEEECCCCTTCGGGGHHHHT-----
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEE-EeCCccchhHHHHH-HhhhccCCceEEEecCCCCHHHHHHHHc-----
Confidence            6899999999999999999999999999885 45 54321   111 1111001257788999999998888775     


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCC----------
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNI----------  171 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~----------  171 (269)
                        ++|+|||+|+...   .  ...+.+++.+++|+.++.++++++.+.   .+.++||++||..+..+.+          
T Consensus        74 --~~d~vih~A~~~~---~--~~~~~~~~~~~~nv~gt~~l~~aa~~~---~~~~~iV~~SS~~~~~~~~~~~~~~~e~~  143 (322)
T 2p4h_X           74 --GCVGIFHTASPID---F--AVSEPEEIVTKRTVDGALGILKACVNS---KTVKRFIYTSSGSAVSFNGKDKDVLDESD  143 (322)
T ss_dssp             --TCSEEEECCCCC-------------CHHHHHHHHHHHHHHHHHTTC---SSCCEEEEEEEGGGTSCSSSCCSEECTTC
T ss_pred             --CCCEEEEcCCccc---C--CCCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEeccHHHcccCCCCCeecCCcc
Confidence              6899999996321   1  111224568999999999999988652   1457999999987543221          


Q ss_pred             ------------CChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHH---Hhc----CCCC
Q 024338          172 ------------GQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKI---LEK----IPLG  232 (269)
Q Consensus       172 ------------~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~---~~~----~~~~  232 (269)
                                  ....|+.||.+.+.+++.++.+   .|++++.++||.+.+|.............   ..+    .+..
T Consensus       144 ~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~  220 (322)
T 2p4h_X          144 WSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQ---NGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGVT  220 (322)
T ss_dssp             CCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---TTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGGCCEE
T ss_pred             ccchhhhcccCcccccHHHHHHHHHHHHHHHHHh---cCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCccCcCC
Confidence                        1126999999776666554432   48999999999999997543222211111   111    1111


Q ss_pred             --CCCCHHHHHHHHHHhccCCCCCCccccEEEecC
Q 024338          233 --RYGQPEEVAGLVEFLALNPAAGYITGQVLTIDG  265 (269)
Q Consensus       233 --~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dg  265 (269)
                        .+.+++|+|+++++++..+.   .+|+ +++.+
T Consensus       221 ~~~~i~v~Dva~a~~~~~~~~~---~~g~-~~~~~  251 (322)
T 2p4h_X          221 RFHMVHVDDVARAHIYLLENSV---PGGR-YNCSP  251 (322)
T ss_dssp             EEEEEEHHHHHHHHHHHHHSCC---CCEE-EECCC
T ss_pred             CcCEEEHHHHHHHHHHHhhCcC---CCCC-EEEcC
Confidence              26689999999999985432   4676 43443

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.89  E-value=2.1e-21  Score=170.22  Aligned_cols=222  Identities=15%  Similarity=0.117  Sum_probs=151.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHH-HHHHHHHHH----cCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEA-EEVCKEIEA----SGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~-~~~~~~l~~----~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      +|++|||||+|+||.+++++|+++|++|+++ .|+.+.. .+..+.+..    .+.++.++.+|++|.+++.++++..  
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--   77 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGI-KRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV--   77 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-CC---------------------CCEEECCCCSSCHHHHHHHHHHH--
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEE-ECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc--
Confidence            4789999999999999999999999999885 5654331 111112211    1357888999999999999988865  


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccC-----------
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVG-----------  169 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~-----------  169 (269)
                         ++|+||||||.....    .+.++++..+++|+.++..+++++.+...+ +.+++|++||...+..           
T Consensus        78 ---~~d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~iv~~SS~~v~g~~~~~~~~E~~~  149 (372)
T 1db3_A           78 ---QPDEVYNLGAMSHVA----VSFESPEYTADVDAMGTLRLLEAIRFLGLE-KKTRFYQASTSELYGLVQEIPQKETTP  149 (372)
T ss_dssp             ---CCSEEEECCCCCTTT----TTTSCHHHHHHHHTHHHHHHHHHHHHTTCT-TTCEEEEEEEGGGGTTCCSSSBCTTSC
T ss_pred             ---CCCEEEECCcccCcc----ccccCHHHHHHHHHHHHHHHHHHHHHhCCC-CCcEEEEeCChhhhCCCCCCCCCccCC
Confidence               789999999975432    234467889999999999999998775422 2479999999765432           


Q ss_pred             CCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc-C----hHHHHHHHhcC-C---C------CCC
Q 024338          170 NIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL-G----EDLEKKILEKI-P---L------GRY  234 (269)
Q Consensus       170 ~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-~----~~~~~~~~~~~-~---~------~~~  234 (269)
                      ..+...|+.+|++.+.+++.++.++   ++.+..+.|..+..|..... .    ..+......+. +   .      ..+
T Consensus       150 ~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~  226 (372)
T 1db3_A          150 FYPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDW  226 (372)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECC
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHHh---CCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeee
Confidence            2346789999999999999998875   56666677665555532211 1    11222222221 1   1      135


Q ss_pred             CCHHHHHHHHHHhccCCCCCCccccEEEecCC
Q 024338          235 GQPEEVAGLVEFLALNPAAGYITGQVLTIDGG  266 (269)
Q Consensus       235 ~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg  266 (269)
                      .+++|+|++++.++..+.     ++++++.+|
T Consensus       227 i~v~Dva~a~~~~~~~~~-----~~~~ni~~~  253 (372)
T 1db3_A          227 GHAKDYVKMQWMMLQQEQ-----PEDFVIATG  253 (372)
T ss_dssp             EEHHHHHHHHHHTTSSSS-----CCCEEECCC
T ss_pred             eEHHHHHHHHHHHHhcCC-----CceEEEcCC
Confidence            689999999999985432     366776555

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.89  E-value=1.4e-21  Score=172.22  Aligned_cols=223  Identities=12%  Similarity=0.030  Sum_probs=154.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHH-----HHHHHHHHHHcCC-cEEEEEccCCCHHHHHHHHHHHHH
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKE-----AEEVCKEIEASGG-QALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~-----~~~~~~~l~~~~~-~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      |++|||||+|+||.+++++|+++|++|+++ .|+.+.     ++.+.+.+...+. ++.++.+|++|.+++.++++.+  
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--  105 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGL-IRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI--  105 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH--
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEE-ecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhc--
Confidence            789999999999999999999999999885 554332     2222222221123 6888999999999999988765  


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-CCCCeEEEEcCCcccc----------C
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMK-KKKGRIINIASVVGLV----------G  169 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~iv~isS~~~~~----------~  169 (269)
                         ++|+|||+||.....    .+.++++..+++|+.++..+++++.+...+ .+.+++|++||...+.          +
T Consensus       106 ---~~d~Vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~E~~~  178 (381)
T 1n7h_A          106 ---KPDEVYNLAAQSHVA----VSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTP  178 (381)
T ss_dssp             ---CCSEEEECCSCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSC
T ss_pred             ---CCCEEEECCcccCcc----ccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCCCCCCCC
Confidence               789999999965321    234567889999999999999999987644 2357999999987543          2


Q ss_pred             CCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccc-c----ChHHHHHHHhcC----------CCCCC
Q 024338          170 NIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAK-L----GEDLEKKILEKI----------PLGRY  234 (269)
Q Consensus       170 ~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~-~----~~~~~~~~~~~~----------~~~~~  234 (269)
                      ..+...|+.+|.+.+.+++.++.++   ++.+..+.|..+..|.... .    ...+......+.          ....+
T Consensus       179 ~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~  255 (381)
T 1n7h_A          179 FHPRSPYAASKCAAHWYTVNYREAY---GLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDW  255 (381)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEEC
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeee
Confidence            3456789999999999999998876   4555445444443332111 1    111222222221          11235


Q ss_pred             CCHHHHHHHHHHhccCCCCCCccccEEEecCCc
Q 024338          235 GQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM  267 (269)
Q Consensus       235 ~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg~  267 (269)
                      .+++|+|+++++++..+.     ++++++.+|.
T Consensus       256 v~v~Dva~a~~~~~~~~~-----~~~~~i~~~~  283 (381)
T 1n7h_A          256 GFAGDYVEAMWLMLQQEK-----PDDYVVATEE  283 (381)
T ss_dssp             EEHHHHHHHHHHHHTSSS-----CCEEEECCSC
T ss_pred             EEHHHHHHHHHHHHhCCC-----CCeEEeeCCC
Confidence            679999999999985432     4788887763

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.88  E-value=2.9e-23  Score=181.41  Aligned_cols=217  Identities=12%  Similarity=0.131  Sum_probs=153.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcC-CcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAG-CKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G-~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      .+++++++|||||+|+||.+++++|+++| +.|+++ .|+.....  ...+.    .+. +.+|++|.++++++++.  .
T Consensus        42 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~-~r~~~~~~--~~~~~----~~~-~~~d~~~~~~~~~~~~~--~  111 (357)
T 2x6t_A           42 SGIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVV-DNLKDGTK--FVNLV----DLN-IADYMDKEDFLIQIMAG--E  111 (357)
T ss_dssp             ------CEEEETTTSHHHHHHHHHHHHTTCCCEEEE-ECCSSGGG--GGGTT----TSC-CSEEEEHHHHHHHHHTT--C
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEE-ecCCCcch--hhccc----Cce-EeeecCcHHHHHHHHhh--c
Confidence            45678999999999999999999999999 888885 55443210  01111    122 67899998888877753  1


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCC---------
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNI---------  171 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~---------  171 (269)
                      .++++|+|||+||....      ..+++++.+++|+.++..+++++.+    .+. ++|++||...+...+         
T Consensus       112 ~~~~~d~Vih~A~~~~~------~~~~~~~~~~~n~~~~~~ll~a~~~----~~~-r~V~~SS~~v~g~~~~~~~~E~~~  180 (357)
T 2x6t_A          112 EFGDVEAIFHEGACSST------TEWDGKYMMDNNYQYSKELLHYCLE----REI-PFLYASSAATYGGRTSDFIESREY  180 (357)
T ss_dssp             CCSSCCEEEECCSCCCT------TCCCHHHHHHHTHHHHHHHHHHHHH----HTC-CEEEEEEGGGGCSCSSCCCSSGGG
T ss_pred             ccCCCCEEEECCcccCC------ccCCHHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEcchHHhCCCCCCCcCCcCC
Confidence            24579999999997543      2235688999999999999998876    244 999999987653332         


Q ss_pred             --CChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccc------cChHHHHHHHhcCC----------CCC
Q 024338          172 --GQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAK------LGEDLEKKILEKIP----------LGR  233 (269)
Q Consensus       172 --~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~------~~~~~~~~~~~~~~----------~~~  233 (269)
                        +...|+.+|.+.+.+++.++.+   .|++++.++||.+.+|....      ....+......+.+          ...
T Consensus       181 ~~p~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (357)
T 2x6t_A          181 EKPLNVFGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRD  257 (357)
T ss_dssp             CCCSSHHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEEC
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEc
Confidence              2568999999999999988765   38999999999999885431      11223333333221          223


Q ss_pred             CCCHHHHHHHHHHhccCCCCCCccccEEEecCCc
Q 024338          234 YGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM  267 (269)
Q Consensus       234 ~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg~  267 (269)
                      +.+++|+|+++++++..+.     |+++++++|.
T Consensus       258 ~i~v~Dva~ai~~~~~~~~-----~~~~~i~~~~  286 (357)
T 2x6t_A          258 FVYVGDVADVNLWFLENGV-----SGIFNLGTGR  286 (357)
T ss_dssp             EEEHHHHHHHHHHHHHHCC-----CEEEEESCSC
T ss_pred             cEEHHHHHHHHHHHHhcCC-----CCeEEecCCC
Confidence            4689999999999986432     7899998764

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.88  E-value=4e-22  Score=171.10  Aligned_cols=206  Identities=14%  Similarity=0.060  Sum_probs=124.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTV  105 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i  105 (269)
                      +|++|||||+|+||.+++++|+++|++|+++ .|+.+.           . +  ++.+|++|.+++.++++..     ++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~-----------~-~--~~~~Dl~d~~~~~~~~~~~-----~~   61 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGC-GFRRAR-----------P-K--FEQVNLLDSNAVHHIIHDF-----QP   61 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEE-C--------------------------------CHHHHHHH-----CC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEE-ccCCCC-----------C-C--eEEecCCCHHHHHHHHHhh-----CC
Confidence            5889999999999999999999999999885 554432           0 1  6789999999998888764     79


Q ss_pred             cEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccC----------CCCChh
Q 024338          106 DILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVG----------NIGQAN  175 (269)
Q Consensus       106 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~----------~~~~~~  175 (269)
                      |+|||+||.....    .+.+++++.+++|+.++..+++++.+.    + .++|++||...+.+          ..+...
T Consensus        62 d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~v~~SS~~v~~~~~~~~~E~~~~~~~~~  132 (315)
T 2ydy_A           62 HVIVHCAAERRPD----VVENQPDAASQLNVDASGNLAKEAAAV----G-AFLIYISSDYVFDGTNPPYREEDIPAPLNL  132 (315)
T ss_dssp             SEEEECC-----------------------CHHHHHHHHHHHHH----T-CEEEEEEEGGGSCSSSCSBCTTSCCCCCSH
T ss_pred             CEEEECCcccChh----hhhcCHHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEchHHHcCCCCCCCCCCCCCCCcCH
Confidence            9999999975432    245678899999999999999998762    2 49999999876544          345678


Q ss_pred             hHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccc---ccChHHHHHHH-hcC-------CCCCCCCHHHHHHHH
Q 024338          176 YSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTA---KLGEDLEKKIL-EKI-------PLGRYGQPEEVAGLV  244 (269)
Q Consensus       176 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~---~~~~~~~~~~~-~~~-------~~~~~~~~~~~a~~~  244 (269)
                      |+.+|.+.+.+++.++.       .+..+.|+.+..+...   .....+..... .+.       ....+.+++|+|+++
T Consensus       133 Y~~sK~~~e~~~~~~~~-------~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~  205 (315)
T 2ydy_A          133 YGKTKLDGEKAVLENNL-------GAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVC  205 (315)
T ss_dssp             HHHHHHHHHHHHHHHCT-------TCEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEECSSBBCCEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCC-------CeEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeeccCceECcEEHHHHHHHH
Confidence            99999999999987742       2345555555544322   22233333332 221       224566899999999


Q ss_pred             HHhccCCCCCCccccEEEecCCc
Q 024338          245 EFLALNPAAGYITGQVLTIDGGM  267 (269)
Q Consensus       245 ~~l~~~~~~~~~~G~~i~~dgg~  267 (269)
                      ++++..+......|+++++++|.
T Consensus       206 ~~~~~~~~~~~~~~~~~~i~~~~  228 (315)
T 2ydy_A          206 RQLAEKRMLDPSIKGTFHWSGNE  228 (315)
T ss_dssp             HHHHHHHHTCTTCCEEEECCCSC
T ss_pred             HHHHHhhccccCCCCeEEEcCCC
Confidence            99985421112468899998874

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.88  E-value=1.9e-22  Score=175.12  Aligned_cols=225  Identities=18%  Similarity=0.178  Sum_probs=156.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcC-------CcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAG-------CKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESM   94 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G-------~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~   94 (269)
                      ..++++++|||||+|+||.+++++|+++|       ++|+++ .|+.+...+      ....++.++.+|++|.++++++
T Consensus        10 ~~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~-~r~~~~~~~------~~~~~~~~~~~Dl~d~~~~~~~   82 (342)
T 2hrz_A           10 LYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLI-DVFQPEAPA------GFSGAVDARAADLSAPGEAEKL   82 (342)
T ss_dssp             SCCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEE-ESSCCCCCT------TCCSEEEEEECCTTSTTHHHHH
T ss_pred             CCccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEE-EccCCcccc------ccCCceeEEEcCCCCHHHHHHH
Confidence            35678999999999999999999999999       788875 554422111      1245788899999999988887


Q ss_pred             HHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCCeEEEEcCCccccCC-C-
Q 024338           95 IKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKK-KKGRIINIASVVGLVGN-I-  171 (269)
Q Consensus        95 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~iv~isS~~~~~~~-~-  171 (269)
                      ++      +++|+|||+||....     .+.+++++.+++|+.++..+++++.+...++ +.+++|++||...+.+. + 
T Consensus        83 ~~------~~~d~vih~A~~~~~-----~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~  151 (342)
T 2hrz_A           83 VE------ARPDVIFHLAAIVSG-----EAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPY  151 (342)
T ss_dssp             HH------TCCSEEEECCCCCHH-----HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCS
T ss_pred             Hh------cCCCEEEECCccCcc-----cccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCC
Confidence            75      389999999996531     2345788999999999999999887743221 25799999998765432 2 


Q ss_pred             ---------CChhhHHhHHHHHHHHHHHHHHh--ccCCeEEEEEe--cCCccCCcccccChHHHHHHHhcC----CCCC-
Q 024338          172 ---------GQANYSAAKAGVIGLTKTVAKEY--ASRNINVNAIA--PGFIASDMTAKLGEDLEKKILEKI----PLGR-  233 (269)
Q Consensus       172 ---------~~~~Y~~sK~al~~~~~~la~e~--~~~gi~v~~v~--pG~v~t~~~~~~~~~~~~~~~~~~----~~~~-  233 (269)
                               +...|+.+|.+.+.+++.++.+.  ....+|++.+.  ||...++.. .....+......+.    +.+. 
T Consensus       152 ~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  230 (342)
T 2hrz_A          152 PIPDEFHTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAAS-GFFSNILREPLVGQEAVLPVPES  230 (342)
T ss_dssp             SBCTTCCCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGG-GHHHHHHHHHHTTCCEEECSCTT
T ss_pred             CcCCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhH-HHHHHHHHHHhcCCCeeccCCCc
Confidence                     56789999999999998887653  12235666666  776554421 11122233332222    1221 


Q ss_pred             ----CCCHHHHHHHHHHhccCCCCCCccccEEEecC
Q 024338          234 ----YGQPEEVAGLVEFLALNPAAGYITGQVLTIDG  265 (269)
Q Consensus       234 ----~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dg  265 (269)
                          +.+++|+|++++.++..+......++++++.|
T Consensus       231 ~~~~~~~v~Dva~~~~~~~~~~~~~~~~~~~~ni~g  266 (342)
T 2hrz_A          231 IRHWHASPRSAVGFLIHGAMIDVEKVGPRRNLSMPG  266 (342)
T ss_dssp             CEEEEECHHHHHHHHHHHHHSCHHHHCSCCEEECCC
T ss_pred             cceeeEehHHHHHHHHHHHhccccccCCccEEEcCC
Confidence                34799999999999854321111357777743

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.88  E-value=8.6e-23  Score=167.21  Aligned_cols=200  Identities=16%  Similarity=0.025  Sum_probs=148.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCcc
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVD  106 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id  106 (269)
                      +++|||||+|+||++++++|+++|++|+++ .|+++....+       ..++.++.+|++|.++++++++       ++|
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~-------~~~~~~~~~Dl~d~~~~~~~~~-------~~d   69 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAV-VRHPEKIKIE-------NEHLKVKKADVSSLDEVCEVCK-------GAD   69 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEE-CSCGGGCCCC-------CTTEEEECCCTTCHHHHHHHHT-------TCS
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEE-EcCcccchhc-------cCceEEEEecCCCHHHHHHHhc-------CCC
Confidence            789999999999999999999999999885 7776543221       2578899999999999888876       689


Q ss_pred             EEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCC----------CChhh
Q 024338          107 ILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNI----------GQANY  176 (269)
Q Consensus       107 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~----------~~~~Y  176 (269)
                      +|||+||....          ..+.+++|+.++..+++++.+    .+.+++|++||..+..+.+          +...|
T Consensus        70 ~vi~~a~~~~~----------~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~Y  135 (227)
T 3dhn_A           70 AVISAFNPGWN----------NPDIYDETIKVYLTIIDGVKK----AGVNRFLMVGGAGSLFIAPGLRLMDSGEVPENIL  135 (227)
T ss_dssp             EEEECCCC----------------CCSHHHHHHHHHHHHHHH----TTCSEEEEECCSTTSEEETTEEGGGTTCSCGGGH
T ss_pred             EEEEeCcCCCC----------ChhHHHHHHHHHHHHHHHHHH----hCCCEEEEeCChhhccCCCCCccccCCcchHHHH
Confidence            99999986421          123688899997777777643    5567999999987665433          36789


Q ss_pred             HHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCC-----CCCCCCHHHHHHHHHHhccCC
Q 024338          177 SAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIP-----LGRYGQPEEVAGLVEFLALNP  251 (269)
Q Consensus       177 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~a~~~~~l~~~~  251 (269)
                      +.+|.+.+.+.+.++.   ..|++++.++||.+.++......-.    .....+     ...+.+++|+|++++.++.++
T Consensus       136 ~~sK~~~e~~~~~~~~---~~~~~~~ilrp~~v~g~~~~~~~~~----~~~~~~~~~~~~~~~i~~~Dva~ai~~~l~~~  208 (227)
T 3dhn_A          136 PGVKALGEFYLNFLMK---EKEIDWVFFSPAADMRPGVRTGRYR----LGKDDMIVDIVGNSHISVEDYAAAMIDELEHP  208 (227)
T ss_dssp             HHHHHHHHHHHHTGGG---CCSSEEEEEECCSEEESCCCCCCCE----EESSBCCCCTTSCCEEEHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHHHHhh---ccCccEEEEeCCcccCCCcccccee----ecCCCcccCCCCCcEEeHHHHHHHHHHHHhCc
Confidence            9999999888777654   4589999999999987743211000    000000     023458999999999999765


Q ss_pred             CCCCccccEEEecC
Q 024338          252 AAGYITGQVLTIDG  265 (269)
Q Consensus       252 ~~~~~~G~~i~~dg  265 (269)
                      .   ..|+++.+.+
T Consensus       209 ~---~~g~~~~~~~  219 (227)
T 3dhn_A          209 K---HHQERFTIGY  219 (227)
T ss_dssp             C---CCSEEEEEEC
T ss_pred             c---ccCcEEEEEe
Confidence            4   4689888765

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.88  E-value=9.1e-22  Score=170.69  Aligned_cols=214  Identities=14%  Similarity=0.082  Sum_probs=155.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHc-CCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCH-HHHHHHHHHHHHhcCC
Q 024338           27 PVAVVTGASRGIGRAVATSLGKA-GCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKE-ADVESMIKTAVDAWGT  104 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~-G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~-~~~~~~~~~~~~~~~~  104 (269)
                      +++|||||+|+||.+++++|+++ |++|+++ .|+.+..+++.     ...++.++.+|++|. +.++++++       +
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~-~r~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~-------~   67 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGL-DIGSDAISRFL-----NHPHFHFVEGDISIHSEWIEYHVK-------K   67 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEE-ESCCGGGGGGT-----TCTTEEEEECCTTTCSHHHHHHHH-------H
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEE-eCCcchHHHhh-----cCCCeEEEeccccCcHHHHHhhcc-------C
Confidence            47999999999999999999998 8999885 56554332221     134688999999984 55666665       5


Q ss_pred             ccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCC-------------
Q 024338          105 VDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNI-------------  171 (269)
Q Consensus       105 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~-------------  171 (269)
                      +|+|||+||......    ..++.++.+++|+.++..+++++.+    .+ +++|++||...+...+             
T Consensus        68 ~d~vih~A~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~  138 (345)
T 2bll_A           68 CDVVLPLVAIATPIE----YTRNPLRVFELDFEENLRIIRYCVK----YR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIV  138 (345)
T ss_dssp             CSEEEECBCCCCHHH----HHHSHHHHHHHHTHHHHHHHHHHHH----TT-CEEEEECCGGGGBTCCCSSBCTTTCCCBC
T ss_pred             CCEEEEcccccCccc----hhcCHHHHHHHHHHHHHHHHHHHHH----hC-CeEEEEecHHHcCCCCCCCcCCccccccc
Confidence            899999999754211    1245678999999999888887754    34 7999999976542211             


Q ss_pred             -----CChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc----------ChHHHHHHHhcCCC-----
Q 024338          172 -----GQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL----------GEDLEKKILEKIPL-----  231 (269)
Q Consensus       172 -----~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~----------~~~~~~~~~~~~~~-----  231 (269)
                           +...|+.+|.+.+.+++.++.+.   |++++.++||.+.+|.....          ...+......+.+.     
T Consensus       139 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (345)
T 2bll_A          139 GPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDG  215 (345)
T ss_dssp             CCTTCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGG
T ss_pred             CcccCcccccHHHHHHHHHHHHHHHHhc---CCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECC
Confidence                 12379999999999999988765   89999999999998864321          12233333333221     


Q ss_pred             ----CCCCCHHHHHHHHHHhccCCCCCCccccEEEecCC
Q 024338          232 ----GRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGG  266 (269)
Q Consensus       232 ----~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg  266 (269)
                          ..+.+++|+|++++.++..+. ...+|+++++.+|
T Consensus       216 g~~~~~~i~v~Dva~a~~~~~~~~~-~~~~g~~~~i~~~  253 (345)
T 2bll_A          216 GKQKRCFTDIRDGIEALYRIIENAG-NRCDGEIINIGNP  253 (345)
T ss_dssp             SCCEEECEEHHHHHHHHHHHHHCGG-GTTTTEEEEECCT
T ss_pred             CCEEEEEEEHHHHHHHHHHHHhhcc-ccCCCceEEeCCC
Confidence                135689999999999985432 2357899999886

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.88  E-value=5.2e-22  Score=174.29  Aligned_cols=217  Identities=14%  Similarity=0.125  Sum_probs=159.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHc-CCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCC-CHHHHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKA-GCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVS-KEADVESMIKTAV   99 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~-G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls-~~~~~~~~~~~~~   99 (269)
                      ..+.+|++|||||+|+||.+++++|+++ |++|+++ .|+.+....+.+     ..++.++.+|++ |.+++.++++   
T Consensus        20 ~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~-~r~~~~~~~~~~-----~~~v~~~~~Dl~~d~~~~~~~~~---   90 (372)
T 3slg_A           20 GSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGM-DMQTDRLGDLVK-----HERMHFFEGDITINKEWVEYHVK---   90 (372)
T ss_dssp             ---CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEE-ESCCTTTGGGGG-----STTEEEEECCTTTCHHHHHHHHH---
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEE-eCChhhhhhhcc-----CCCeEEEeCccCCCHHHHHHHhc---
Confidence            4567899999999999999999999999 9999986 565543332221     357899999999 9999888886   


Q ss_pred             HhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCC---------
Q 024338          100 DAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGN---------  170 (269)
Q Consensus       100 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~---------  170 (269)
                          ++|+|||+|+......    ..++.++.+++|+.++..+++++..    .+ +++|++||...+-..         
T Consensus        91 ----~~d~Vih~A~~~~~~~----~~~~~~~~~~~nv~~~~~ll~a~~~----~~-~~~v~~SS~~vyg~~~~~~~~e~~  157 (372)
T 3slg_A           91 ----KCDVILPLVAIATPAT----YVKQPLRVFELDFEANLPIVRSAVK----YG-KHLVFPSTSEVYGMCADEQFDPDA  157 (372)
T ss_dssp             ----HCSEEEECBCCCCHHH----HHHCHHHHHHHHTTTTHHHHHHHHH----HT-CEEEEECCGGGGBSCCCSSBCTTT
T ss_pred             ----cCCEEEEcCccccHHH----HhhCHHHHHHHHHHHHHHHHHHHHH----hC-CcEEEeCcHHHhCCCCCCCCCccc
Confidence                6899999999754321    2345668899999998888887754    34 799999996543221         


Q ss_pred             ---------CCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccc----------cChHHHHHHHhcCCC
Q 024338          171 ---------IGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAK----------LGEDLEKKILEKIPL  231 (269)
Q Consensus       171 ---------~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~----------~~~~~~~~~~~~~~~  231 (269)
                               .+...|+.+|.+.+.+++.++.+    |++++.+.|+.+.+|....          ....+......+.+.
T Consensus       158 ~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~----g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (372)
T 3slg_A          158 SALTYGPINKPRWIYACSKQLMDRVIWGYGME----GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENI  233 (372)
T ss_dssp             CCEEECCTTCTTHHHHHHHHHHHHHHHHHHTT----TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCE
T ss_pred             cccccCCCCCCCCcHHHHHHHHHHHHHHHHHC----CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCc
Confidence                     23347999999999998887654    8999999999999886432          122333333333222


Q ss_pred             ---------CCCCCHHHHHHHHHHhccCCCCCCccccEEEecC
Q 024338          232 ---------GRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDG  265 (269)
Q Consensus       232 ---------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dg  265 (269)
                               ..+.+++|+|++++.++..+. ....|+++++.+
T Consensus       234 ~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~-~~~~~~~~ni~~  275 (372)
T 3slg_A          234 SLVDGGSQKRAFTYVDDGISALMKIIENSN-GVATGKIYNIGN  275 (372)
T ss_dssp             EEGGGGCCEEECEEHHHHHHHHHHHHHCGG-GTTTTEEEEECC
T ss_pred             EEeCCCceEEEEEEHHHHHHHHHHHHhccc-CcCCCceEEeCC
Confidence                     135579999999999996543 235689999988

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.88  E-value=8.3e-22  Score=160.91  Aligned_cols=198  Identities=15%  Similarity=0.061  Sum_probs=138.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCccE
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDI  107 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~  107 (269)
                      ++|||||+|+||++++++|+++|++|+++ .|+++...++.      ...+.++.+|++|.++         +.+.++|+
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~-~R~~~~~~~~~------~~~~~~~~~D~~d~~~---------~~~~~~d~   65 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAV-VRDPQKAADRL------GATVATLVKEPLVLTE---------ADLDSVDA   65 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEE-ESCHHHHHHHT------CTTSEEEECCGGGCCH---------HHHTTCSE
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEE-Eeccccccccc------CCCceEEecccccccH---------hhcccCCE
Confidence            49999999999999999999999999985 77776654332      3467889999999887         22358999


Q ss_pred             EEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCC--------------C
Q 024338          108 LINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIG--------------Q  173 (269)
Q Consensus       108 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~--------------~  173 (269)
                      ||||||......           ..++|+.+    ++.+++.+++.+ +++|++||..+..+.+.              .
T Consensus        66 vi~~ag~~~~~~-----------~~~~n~~~----~~~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~  129 (224)
T 3h2s_A           66 VVDALSVPWGSG-----------RGYLHLDF----ATHLVSLLRNSD-TLAVFILGSASLAMPGADHPMILDFPESAASQ  129 (224)
T ss_dssp             EEECCCCCTTSS-----------CTHHHHHH----HHHHHHTCTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGS
T ss_pred             EEECCccCCCcc-----------hhhHHHHH----HHHHHHHHHHcC-CcEEEEecceeeccCCCCccccccCCCCCccc
Confidence            999999762211           12457776    455556665566 99999999877665444              6


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCC
Q 024338          174 ANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAA  253 (269)
Q Consensus       174 ~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~  253 (269)
                      ..|+.+|.+.+.+    .......|++++.++||.+.++.....................+.+++|+|++++.++..+. 
T Consensus       130 ~~y~~sK~~~e~~----~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~-  204 (224)
T 3h2s_A          130 PWYDGALYQYYEY----QFLQMNANVNWIGISPSEAFPSGPATSYVAGKDTLLVGEDGQSHITTGNMALAILDQLEHPT-  204 (224)
T ss_dssp             TTHHHHHHHHHHH----HHHTTCTTSCEEEEEECSBCCCCCCCCEEEESSBCCCCTTSCCBCCHHHHHHHHHHHHHSCC-
T ss_pred             hhhHHHHHHHHHH----HHHHhcCCCcEEEEcCccccCCCcccCceecccccccCCCCCceEeHHHHHHHHHHHhcCcc-
Confidence            7899999987744    22334679999999999999873211100000000000111346789999999999997654 


Q ss_pred             CCccccEEEec
Q 024338          254 GYITGQVLTID  264 (269)
Q Consensus       254 ~~~~G~~i~~d  264 (269)
                        ..|++|.+-
T Consensus       205 --~~g~~~~~~  213 (224)
T 3h2s_A          205 --AIRDRIVVR  213 (224)
T ss_dssp             --CTTSEEEEE
T ss_pred             --ccCCEEEEe
Confidence              458888774

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.88  E-value=3.4e-21  Score=169.34  Aligned_cols=221  Identities=16%  Similarity=0.087  Sum_probs=154.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHH-----HHHHHHHHHH-cCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKE-----AEEVCKEIEA-SGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~-----~~~~~~~l~~-~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      |++|||||+|+||.+++++|+++|++|+++ .|+.+.     ++.+.+.+.. ...++.++.+|++|.+++.++++..  
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--  101 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGI-VRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV--  101 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH--
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEE-ECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhc--
Confidence            789999999999999999999999999886 454321     2222111110 1346888999999999999988865  


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccC-----------
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVG-----------  169 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~-----------  169 (269)
                         ++|+||||||.....    .+.++++..+++|+.++..+++++.+... ++.++||++||...+..           
T Consensus       102 ---~~d~vih~A~~~~~~----~~~~~~~~~~~~N~~g~~~l~~a~~~~~~-~~~~~iv~~SS~~~~~~~~~~~~~E~~~  173 (375)
T 1t2a_A          102 ---KPTEIYNLGAQSHVK----ISFDLAEYTADVDGVGTLRLLDAVKTCGL-INSVKFYQASTSELYGKVQEIPQKETTP  173 (375)
T ss_dssp             ---CCSEEEECCSCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHTTC-TTTCEEEEEEEGGGTCSCSSSSBCTTSC
T ss_pred             ---CCCEEEECCCccccc----ccccCHHHHHHHHHHHHHHHHHHHHHhCC-CccceEEEecchhhhCCCCCCCCCccCC
Confidence               789999999964321    13456788999999999999999877442 22379999999876532           


Q ss_pred             CCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc-C----hHHHHHHHhcC-C---C------CCC
Q 024338          170 NIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL-G----EDLEKKILEKI-P---L------GRY  234 (269)
Q Consensus       170 ~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-~----~~~~~~~~~~~-~---~------~~~  234 (269)
                      ..+...|+.+|++.+.+++.++.++   ++.+..+.|+.+..|..... .    ..+......+. +   .      ..+
T Consensus       174 ~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~  250 (375)
T 1t2a_A          174 FYPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDW  250 (375)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECC
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeee
Confidence            2345689999999999999998775   68888888877766643211 1    11222222221 1   1      135


Q ss_pred             CCHHHHHHHHHHhccCCCCCCccccEEEecCC
Q 024338          235 GQPEEVAGLVEFLALNPAAGYITGQVLTIDGG  266 (269)
Q Consensus       235 ~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg  266 (269)
                      .+++|+|++++.++..+.     ++++++.+|
T Consensus       251 i~v~Dva~a~~~~~~~~~-----~~~~ni~~~  277 (375)
T 1t2a_A          251 GHAKDYVEAMWLMLQNDE-----PEDFVIATG  277 (375)
T ss_dssp             EEHHHHHHHHHHHHHSSS-----CCCEEECCS
T ss_pred             EEHHHHHHHHHHHHhcCC-----CceEEEeCC
Confidence            579999999999986532     356666554

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.87  E-value=4.2e-21  Score=166.01  Aligned_cols=221  Identities=15%  Similarity=0.049  Sum_probs=154.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHH-HHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEA-EEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~-~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      -.++++|||||+|+||.+++++|+++|++|+++ .|+.+.. ....+.+. ...++.++.+|++|.++++++++..    
T Consensus        12 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~----   85 (335)
T 1rpn_A           12 SMTRSALVTGITGQDGAYLAKLLLEKGYRVHGL-VARRSSDTRWRLRELG-IEGDIQYEDGDMADACSVQRAVIKA----   85 (335)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECCCSSCCCHHHHHTT-CGGGEEEEECCTTCHHHHHHHHHHH----
T ss_pred             ccCCeEEEECCCChHHHHHHHHHHHCCCeEEEE-eCCCccccccchhhcc-ccCceEEEECCCCCHHHHHHHHHHc----
Confidence            457899999999999999999999999999886 4543321 01111111 1346888999999999999988765    


Q ss_pred             CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCeEEEEcCCccccCC-----------
Q 024338          103 GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK-KGRIINIASVVGLVGN-----------  170 (269)
Q Consensus       103 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~-----------  170 (269)
                       ++|+|||+||.....    .+.+++++.+++|+.++..+++++.+.    + .+++|++||...+.+.           
T Consensus        86 -~~d~Vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~~v~~SS~~v~g~~~~~~~~E~~~~  156 (335)
T 1rpn_A           86 -QPQEVYNLAAQSFVG----ASWNQPVTTGVVDGLGVTHLLEAIRQF----SPETRFYQASTSEMFGLIQAERQDENTPF  156 (335)
T ss_dssp             -CCSEEEECCSCCCHH----HHTTSHHHHHHHHTHHHHHHHHHHHHH----CTTSEEEEEEEGGGGCSCSSSSBCTTSCC
T ss_pred             -CCCEEEECccccchh----hhhhChHHHHHHHHHHHHHHHHHHHHh----CCCCeEEEEeCHHHhCCCCCCCCCcccCC
Confidence             789999999964321    012356789999999999999988653    3 3799999997654322           


Q ss_pred             CCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC-----hHHHHHHHhcC-C---CC------CCC
Q 024338          171 IGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG-----EDLEKKILEKI-P---LG------RYG  235 (269)
Q Consensus       171 ~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~-----~~~~~~~~~~~-~---~~------~~~  235 (269)
                      .+...|+.+|.+.+.+++.++.++   ++++..+.|+.+..|......     ..+......+. +   .+      .+.
T Consensus       157 ~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i  233 (335)
T 1rpn_A          157 YPRSPYGVAKLYGHWITVNYRESF---GLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWG  233 (335)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECE
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHc---CCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceE
Confidence            234589999999999999988765   688888999888877533211     11222222221 1   11      245


Q ss_pred             CHHHHHHHHHHhccCCCCCCccccEEEecCCc
Q 024338          236 QPEEVAGLVEFLALNPAAGYITGQVLTIDGGM  267 (269)
Q Consensus       236 ~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg~  267 (269)
                      +++|+|++++.++..+.     ++++++.+|.
T Consensus       234 ~v~Dva~a~~~~~~~~~-----~~~~ni~~~~  260 (335)
T 1rpn_A          234 FAGDYVEAMWLMLQQDK-----ADDYVVATGV  260 (335)
T ss_dssp             EHHHHHHHHHHHHHSSS-----CCCEEECCSC
T ss_pred             EHHHHHHHHHHHHhcCC-----CCEEEEeCCC
Confidence            78999999999986532     3677776653

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.87  E-value=3e-22  Score=168.17  Aligned_cols=180  Identities=19%  Similarity=0.246  Sum_probs=140.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCcc
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVD  106 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id  106 (269)
                      |++|||||+|+||.+++++|+++|++|+++ .|++...         ...++.++.+|++|.+++.++++       ++|
T Consensus         3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~---------~~~~~~~~~~Dl~d~~~~~~~~~-------~~d   65 (267)
T 3ay3_A            3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLS-DIVDLGA---------AEAHEEIVACDLADAQAVHDLVK-------DCD   65 (267)
T ss_dssp             EEEEEESTTSHHHHHHGGGGGGTEEEEEEC-CSSCCCC---------CCTTEEECCCCTTCHHHHHHHHT-------TCS
T ss_pred             ceEEEECCCCHHHHHHHHHHHhCCCEEEEE-eCCCccc---------cCCCccEEEccCCCHHHHHHHHc-------CCC
Confidence            689999999999999999999999998884 6654321         01357889999999998888776       699


Q ss_pred             EEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCC------------CCh
Q 024338          107 ILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNI------------GQA  174 (269)
Q Consensus       107 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~------------~~~  174 (269)
                      +||||||...        .+.+++.+++|+.++..+++++.+    .+.+++|++||...+...+            +..
T Consensus        66 ~vi~~a~~~~--------~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~  133 (267)
T 3ay3_A           66 GIIHLGGVSV--------ERPWNDILQANIIGAYNLYEAARN----LGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDS  133 (267)
T ss_dssp             EEEECCSCCS--------CCCHHHHHHHTHHHHHHHHHHHHH----TTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCS
T ss_pred             EEEECCcCCC--------CCCHHHHHHHHHHHHHHHHHHHHH----hCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCC
Confidence            9999999752        134678999999999999988864    4567999999987654322            357


Q ss_pred             hhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCcc-CCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCC
Q 024338          175 NYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIA-SDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNP  251 (269)
Q Consensus       175 ~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~  251 (269)
                      .|+.+|.+.+.+++.++.   +.|++++.++||.+. ++.    ....   .      ..+.+++|+|++++.++..+
T Consensus       134 ~Y~~sK~~~e~~~~~~~~---~~gi~~~~lrp~~v~~~~~----~~~~---~------~~~~~~~dva~~~~~~~~~~  195 (267)
T 3ay3_A          134 LYGLSKCFGEDLASLYYH---KFDIETLNIRIGSCFPKPK----DARM---M------ATWLSVDDFMRLMKRAFVAP  195 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHH---TTCCCEEEEEECBCSSSCC----SHHH---H------HHBCCHHHHHHHHHHHHHSS
T ss_pred             hHHHHHHHHHHHHHHHHH---HcCCCEEEEeceeecCCCC----CCCe---e------eccccHHHHHHHHHHHHhCC
Confidence            899999999999988764   458999999999984 432    1111   1      12458999999999998654

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.87  E-value=1.2e-22  Score=176.06  Aligned_cols=216  Identities=18%  Similarity=0.162  Sum_probs=143.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHH--HHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEE--VCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~--~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      +|++|||||+|+||.+++++|+++|++|+++ .|+.+...+  ....+. ...++.++.+|++|.++++++++       
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~-~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~-------   79 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTT-VRDPDNQKKVSHLLELQ-ELGDLKIFRADLTDELSFEAPIA-------   79 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEE-ESCTTCTTTTHHHHHHG-GGSCEEEEECCTTTSSSSHHHHT-------
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEE-EcCcchhhhHHHHHhcC-CCCcEEEEecCCCChHHHHHHHc-------
Confidence            6899999999999999999999999999875 455432111  112222 23468889999999888887765       


Q ss_pred             CccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccC---------C----
Q 024338          104 TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVG---------N----  170 (269)
Q Consensus       104 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~---------~----  170 (269)
                      ++|+|||+|+....   .  ..+..++.+++|+.++.++++++.+..   +.++||++||..+..+         .    
T Consensus        80 ~~D~Vih~A~~~~~---~--~~~~~~~~~~~nv~gt~~ll~aa~~~~---~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~  151 (338)
T 2rh8_A           80 GCDFVFHVATPVHF---A--SEDPENDMIKPAIQGVVNVMKACTRAK---SVKRVILTSSAAAVTINQLDGTGLVVDEKN  151 (338)
T ss_dssp             TCSEEEEESSCCCC--------------CHHHHHHHHHHHHHHHHCT---TCCEEEEECCHHHHHHHHHTCSCCCCCTTT
T ss_pred             CCCEEEEeCCccCC---C--CCCcHHHHHHHHHHHHHHHHHHHHHcC---CcCEEEEEecHHHeecCCcCCCCcccChhh
Confidence            68999999985421   1  112235589999999999999887521   3579999999763210         0    


Q ss_pred             --------C---CChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHH---Hhc--------
Q 024338          171 --------I---GQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKI---LEK--------  228 (269)
Q Consensus       171 --------~---~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~---~~~--------  228 (269)
                              +   ....|+.||.+.+.+++.++.+   .|+++++++||.+.+|......+......   ..+        
T Consensus       152 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~  228 (338)
T 2rh8_A          152 WTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEE---NNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGM  228 (338)
T ss_dssp             TTCC-------CCCCCCTTSCCHHHHHHHHHHHH---HTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHHHHHHH
T ss_pred             ccchhhccccCCccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCccccccc
Confidence                    0   1126999999888888776654   38999999999999986543222111100   000        


Q ss_pred             ------CCCCCCCCHHHHHHHHHHhccCCCCCCccccEEEec
Q 024338          229 ------IPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTID  264 (269)
Q Consensus       229 ------~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~d  264 (269)
                            .....+.+++|+|++++++++.+.   ..|.++..+
T Consensus       229 ~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~---~~~~~~~~~  267 (338)
T 2rh8_A          229 KGMQMLSGSVSIAHVEDVCRAHIFVAEKES---ASGRYICCA  267 (338)
T ss_dssp             HHHHHHHSSEEEEEHHHHHHHHHHHHHCTT---CCEEEEECS
T ss_pred             cccccccCcccEEEHHHHHHHHHHHHcCCC---cCCcEEEec
Confidence                  000136689999999999985432   345544333

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.87  E-value=3.4e-21  Score=166.28  Aligned_cols=216  Identities=13%  Similarity=0.078  Sum_probs=154.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCcc
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVD  106 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id  106 (269)
                      |++|||||+|+||.+++++|+++|++|+++ .|+.....   +.+   ..++.++.+|++|.+++++++++     .++|
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~---~~~---~~~~~~~~~D~~~~~~~~~~~~~-----~~~d   69 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVV-DNLQTGHE---DAI---TEGAKFYNGDLRDKAFLRDVFTQ-----ENIE   69 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECCSSCCG---GGS---CTTSEEEECCTTCHHHHHHHHHH-----SCEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEE-eCCCcCch---hhc---CCCcEEEECCCCCHHHHHHHHhh-----cCCC
Confidence            579999999999999999999999999885 45432211   111   23677899999999998888775     3799


Q ss_pred             EEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccC-----------CCCChh
Q 024338          107 ILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVG-----------NIGQAN  175 (269)
Q Consensus       107 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~-----------~~~~~~  175 (269)
                      +|||+||.....    .+.+++++.+++|+.++..+++++..    .+.+++|++||...+..           ..+...
T Consensus        70 ~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~  141 (330)
T 2c20_A           70 AVMHFAADSLVG----VSMEKPLQYYNNNVYGALCLLEVMDE----FKVDKFIFSSTAATYGEVDVDLITEETMTNPTNT  141 (330)
T ss_dssp             EEEECCCCCCHH----HHHHSHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEECCGGGGCSCSSSSBCTTSCCCCSSH
T ss_pred             EEEECCcccCcc----ccccCHHHHHHHHhHHHHHHHHHHHH----cCCCEEEEeCCceeeCCCCCCCCCcCCCCCCCCh
Confidence            999999965321    13456788999999999998887643    45679999999765432           124578


Q ss_pred             hHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccc-----------cChHHHHHHHhc-CC-----------C-
Q 024338          176 YSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAK-----------LGEDLEKKILEK-IP-----------L-  231 (269)
Q Consensus       176 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~-----------~~~~~~~~~~~~-~~-----------~-  231 (269)
                      |+.+|.+.+.+++.++.++   |++++.++||.+.++....           ..+.+....... .+           . 
T Consensus       142 Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g  218 (330)
T 2c20_A          142 YGETKLAIEKMLHWYSQAS---NLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDG  218 (330)
T ss_dssp             HHHHHHHHHHHHHHHHHTS---SCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSS
T ss_pred             HHHHHHHHHHHHHHHHHHh---CCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCC
Confidence            9999999999999988764   8999999999998874211           111122211111 11           0 


Q ss_pred             ---CCCCCHHHHHHHHHHhccCCCCCCccccEEEecCC
Q 024338          232 ---GRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGG  266 (269)
Q Consensus       232 ---~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg  266 (269)
                         ..+.+++|+|++++.++..+.. ...++++++.+|
T Consensus       219 ~~~~~~v~v~Dva~a~~~~~~~~~~-~~~~~~~ni~~~  255 (330)
T 2c20_A          219 TCIRDYIHVEDLVAAHFLGLKDLQN-GGESDFYNLGNG  255 (330)
T ss_dssp             SCEECEEEHHHHHHHHHHHHHHHHT-TCCCEEEECCCT
T ss_pred             ceeEeeEeHHHHHHHHHHHHhcccc-CCCCCeEEeCCC
Confidence               1245689999999998854322 123678888655

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.87  E-value=1.3e-21  Score=166.07  Aligned_cols=195  Identities=15%  Similarity=0.125  Sum_probs=146.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      -..+++|||||+|+||.+++++|+++|++|+++ .|+                     .+|++|.+++.+++++.     
T Consensus        10 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~-~r~---------------------~~Dl~d~~~~~~~~~~~-----   62 (292)
T 1vl0_A           10 HHHMKILITGANGQLGREIQKQLKGKNVEVIPT-DVQ---------------------DLDITNVLAVNKFFNEK-----   62 (292)
T ss_dssp             --CEEEEEESTTSHHHHHHHHHHTTSSEEEEEE-CTT---------------------TCCTTCHHHHHHHHHHH-----
T ss_pred             cccceEEEECCCChHHHHHHHHHHhCCCeEEec-cCc---------------------cCCCCCHHHHHHHHHhc-----
Confidence            356899999999999999999999999999885 554                     37999999999888765     


Q ss_pred             CccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCC-----------C
Q 024338          104 TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNI-----------G  172 (269)
Q Consensus       104 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~-----------~  172 (269)
                      ++|+|||+||....    +.+.+++++.+++|+.++..+++++.+    .+. ++|++||...+.+.+           +
T Consensus        63 ~~d~vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~l~~a~~~----~~~-~iv~~SS~~v~~~~~~~~~~E~~~~~~  133 (292)
T 1vl0_A           63 KPNVVINCAAHTAV----DKCEEQYDLAYKINAIGPKNLAAAAYS----VGA-EIVQISTDYVFDGEAKEPITEFDEVNP  133 (292)
T ss_dssp             CCSEEEECCCCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHH----HTC-EEEEEEEGGGSCSCCSSCBCTTSCCCC
T ss_pred             CCCEEEECCccCCH----HHHhcCHHHHHHHHHHHHHHHHHHHHH----cCC-eEEEechHHeECCCCCCCCCCCCCCCC
Confidence            79999999996432    123456789999999999999998876    233 999999986554322           4


Q ss_pred             ChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCC-------CCCCCCHHHHHHHHH
Q 024338          173 QANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIP-------LGRYGQPEEVAGLVE  245 (269)
Q Consensus       173 ~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~a~~~~  245 (269)
                      ...|+.+|.+.+.+++.++.       .+..+.|+.+.++ .....+.+........+       ...+.+++|+|++++
T Consensus       134 ~~~Y~~sK~~~E~~~~~~~~-------~~~~lR~~~v~G~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~  205 (292)
T 1vl0_A          134 QSAYGKTKLEGENFVKALNP-------KYYIVRTAWLYGD-GNNFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVL  205 (292)
T ss_dssp             CSHHHHHHHHHHHHHHHHCS-------SEEEEEECSEESS-SSCHHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHhhCC-------CeEEEeeeeeeCC-CcChHHHHHHHHhcCCcEEeecCeeeCCccHHHHHHHHH
Confidence            56899999999998887642       4778888888876 22222333333332222       134567999999999


Q ss_pred             HhccCCCCCCccccEEEecCCc
Q 024338          246 FLALNPAAGYITGQVLTIDGGM  267 (269)
Q Consensus       246 ~l~~~~~~~~~~G~~i~~dgg~  267 (269)
                      ++++.+     +|+++++++|.
T Consensus       206 ~~~~~~-----~~~~~~i~~~~  222 (292)
T 1vl0_A          206 KVIDEK-----NYGTFHCTCKG  222 (292)
T ss_dssp             HHHHHT-----CCEEEECCCBS
T ss_pred             HHHhcC-----CCcEEEecCCC
Confidence            998543     58899998764

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.86  E-value=6.1e-21  Score=163.55  Aligned_cols=205  Identities=12%  Similarity=0.106  Sum_probs=152.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTV  105 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i  105 (269)
                      ++++|||||+|+||.+++++|+++|++|+++ .|++....     +.    ++.++.+|++ .+++.++++       ++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~-----~~----~~~~~~~Dl~-~~~~~~~~~-------~~   63 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIIL-TRSIGNKA-----IN----DYEYRVSDYT-LEDLINQLN-------DV   63 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ESCCC--------------CCEEEECCCC-HHHHHHHTT-------TC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEE-eCCCCccc-----CC----ceEEEEcccc-HHHHHHhhc-------CC
Confidence            3789999999999999999999999999986 55533222     11    6778999999 888887765       89


Q ss_pred             cEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccC-----------CCCCh
Q 024338          106 DILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVG-----------NIGQA  174 (269)
Q Consensus       106 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~-----------~~~~~  174 (269)
                      |+|||+|+.....        ..++.+++|+.++..+++++..    .+.+++|++||...+..           ..+..
T Consensus        64 d~Vih~a~~~~~~--------~~~~~~~~n~~~~~~ll~a~~~----~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~  131 (311)
T 3m2p_A           64 DAVVHLAATRGSQ--------GKISEFHDNEILTQNLYDACYE----NNISNIVYASTISAYSDETSLPWNEKELPLPDL  131 (311)
T ss_dssp             SEEEECCCCCCSS--------SCGGGTHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCSS
T ss_pred             CEEEEccccCCCC--------ChHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCc
Confidence            9999999976543        3456788999998888777743    55679999999655422           22456


Q ss_pred             hhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccc--cChHHHHHHHhcCCC---------CCCCCHHHHHHH
Q 024338          175 NYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAK--LGEDLEKKILEKIPL---------GRYGQPEEVAGL  243 (269)
Q Consensus       175 ~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~--~~~~~~~~~~~~~~~---------~~~~~~~~~a~~  243 (269)
                      .|+.+|.+.+.+++.++.+   .|++++.+.|+.+.+|....  ....+......+.+.         ..+.+++|+|++
T Consensus       132 ~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a  208 (311)
T 3m2p_A          132 MYGVSKLACEHIGNIYSRK---KGLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKS  208 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHHH---SCCEEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHH
Confidence            8999999999999988775   48999999999999886542  333444444433322         124478999999


Q ss_pred             HHHhccCCCCCCccccEEEecCCc
Q 024338          244 VEFLALNPAAGYITGQVLTIDGGM  267 (269)
Q Consensus       244 ~~~l~~~~~~~~~~G~~i~~dgg~  267 (269)
                      ++.++..+.    .|+++++.+|.
T Consensus       209 ~~~~~~~~~----~~~~~~i~~~~  228 (311)
T 3m2p_A          209 VIYALKQEK----VSGTFNIGSGD  228 (311)
T ss_dssp             HHHHTTCTT----CCEEEEECCSC
T ss_pred             HHHHHhcCC----CCCeEEeCCCC
Confidence            999996542    68899987764

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.86  E-value=7e-21  Score=154.89  Aligned_cols=198  Identities=14%  Similarity=0.111  Sum_probs=131.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCccE
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDI  107 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~  107 (269)
                      ++|||||+|+||++++++|+++|++|+++ .|+++..+++.       ..+.++.+|++|.++  +       .+.++|+
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~-~R~~~~~~~~~-------~~~~~~~~D~~d~~~--~-------~~~~~d~   64 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAI-VRNAGKITQTH-------KDINILQKDIFDLTL--S-------DLSDQNV   64 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEE-ESCSHHHHHHC-------SSSEEEECCGGGCCH--H-------HHTTCSE
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEE-EcCchhhhhcc-------CCCeEEeccccChhh--h-------hhcCCCE
Confidence            59999999999999999999999999985 67766554332       467889999999887  2       2348999


Q ss_pred             EEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCC------------CChh
Q 024338          108 LINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNI------------GQAN  175 (269)
Q Consensus       108 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~------------~~~~  175 (269)
                      ||||||.....             .+.|+.+    ++.+++.+++.+.+++|++||..+..+.+            +...
T Consensus        65 vi~~ag~~~~~-------------~~~~~~~----~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~  127 (221)
T 3ew7_A           65 VVDAYGISPDE-------------AEKHVTS----LDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPY  127 (221)
T ss_dssp             EEECCCSSTTT-------------TTSHHHH----HHHHHHHHCSCCSSEEEEECCCC-------------------CCC
T ss_pred             EEECCcCCccc-------------cchHHHH----HHHHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCCCCHHH
Confidence            99999974321             2335555    56666666666678999999998765543            2456


Q ss_pred             hHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc-ChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCC
Q 024338          176 YSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL-GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAG  254 (269)
Q Consensus       176 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~  254 (269)
                      |+.+|.+.+.+. .+..  ...|++++.++||.+.++..... .....+..........+.+++|+|++++.++..++  
T Consensus       128 y~~~k~~~e~~~-~~~~--~~~gi~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~--  202 (221)
T 3ew7_A          128 YPTARAQAKQLE-HLKS--HQAEFSWTYISPSAMFEPGERTGDYQIGKDHLLFGSDGNSFISMEDYAIAVLDEIERPN--  202 (221)
T ss_dssp             SCCHHHHHHHHH-HHHT--TTTTSCEEEEECSSCCCCC---------------------CCCHHHHHHHHHHHHHSCS--
T ss_pred             HHHHHHHHHHHH-HHHh--hccCccEEEEeCcceecCCCccCceEeccccceecCCCCceEeHHHHHHHHHHHHhCcc--
Confidence            999999887762 2211  15689999999999998721110 00000000000011235689999999999997654  


Q ss_pred             CccccEEEecC
Q 024338          255 YITGQVLTIDG  265 (269)
Q Consensus       255 ~~~G~~i~~dg  265 (269)
                       ..|++|++-+
T Consensus       203 -~~g~~~~~~~  212 (221)
T 3ew7_A          203 -HLNEHFTVAG  212 (221)
T ss_dssp             -CTTSEEECCC
T ss_pred             -ccCCEEEECC
Confidence             4589988755

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.86  E-value=8.8e-21  Score=164.26  Aligned_cols=220  Identities=15%  Similarity=0.115  Sum_probs=148.5

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCcEEEEecCC---HHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGCKVLVNYARS---SKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~---~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      ++|||||+|+||.+++++|+++|++|+++....   .+..+.+. .+  .+.++.++.+|++|.+++++++++.     +
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~Dl~~~~~~~~~~~~~-----~   73 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIE-RL--GGKHPTFVEGDIRNEALMTEILHDH-----A   73 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHH-HH--HTSCCEEEECCTTCHHHHHHHHHHT-----T
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHH-hh--cCCcceEEEccCCCHHHHHHHhhcc-----C
Confidence            699999999999999999999999998853211   22222221 11  1346778999999999988887652     6


Q ss_pred             ccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcccc-----------CC-CC
Q 024338          105 VDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLV-----------GN-IG  172 (269)
Q Consensus       105 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~-----------~~-~~  172 (269)
                      +|+||||||......    ..+..++.+++|+.++..+++++.    +.+.+++|++||...+.           +. ++
T Consensus        74 ~D~vih~A~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~  145 (338)
T 1udb_A           74 IDTVIHFAGLKAVGE----SVQKPLEYYDNNVNGTLRLISAMR----AANVKNFIFSSSATVYGDNPKIPYVESFPTGTP  145 (338)
T ss_dssp             CSEEEECCSCCCHHH----HHHCHHHHHHHHHHHHHHHHHHHH----HHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCC
T ss_pred             CCEEEECCccCcccc----chhcHHHHHHHHHHHHHHHHHHHH----hcCCCeEEEEccHHHhCCCCCCCcCcccCCCCC
Confidence            999999999653211    223457789999999998887654    34567999999976542           11 23


Q ss_pred             ChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcc------------cccChHHHHHHH-hcCC---------
Q 024338          173 QANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMT------------AKLGEDLEKKIL-EKIP---------  230 (269)
Q Consensus       173 ~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~------------~~~~~~~~~~~~-~~~~---------  230 (269)
                      ...|+.||++.+.+++.++.+.  .|+++..+.|+.+..+..            ....+.+..... ...+         
T Consensus       146 ~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  223 (338)
T 1udb_A          146 QSPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYP  223 (338)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSS
T ss_pred             CChHHHHHHHHHHHHHHHHHhc--CCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCccc
Confidence            6789999999999999998874  378999998876654421            011111222111 1110         


Q ss_pred             ------CCCCCCHHHHHHHHHHhccCCCCCCccccEEEecCC
Q 024338          231 ------LGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGG  266 (269)
Q Consensus       231 ------~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg  266 (269)
                            ...+.+++|+|++++.++..... ...++++++.+|
T Consensus       224 ~~~g~~~~~~i~v~Dva~a~~~~l~~~~~-~~~~~~yni~~~  264 (338)
T 1udb_A          224 TEDGTGVRDYIHVMDLADGHVVAMEKLAN-KPGVHIYNLGAG  264 (338)
T ss_dssp             SSSSSCEECEEEHHHHHHHHHHHHHHHTT-CCEEEEEEESCS
T ss_pred             CCCCceeeeeEEHHHHHHHHHHHHhhhhc-cCCCcEEEecCC
Confidence                  11345789999999888743211 112478887655

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.86  E-value=6e-21  Score=179.63  Aligned_cols=217  Identities=13%  Similarity=0.087  Sum_probs=158.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHc-CCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHH-HHHHHHHHHHh
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKA-GCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEAD-VESMIKTAVDA  101 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~-G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~-~~~~~~~~~~~  101 (269)
                      ++++++|||||+|+||.+++++|+++ |++|+++ .|+.+...++.     ...++.++.+|++|.++ ++++++     
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~-~r~~~~~~~~~-----~~~~v~~v~~Dl~d~~~~~~~~~~-----  381 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGL-DIGSDAISRFL-----NHPHFHFVEGDISIHSEWIEYHVK-----  381 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEE-ESCCTTTGGGT-----TCTTEEEEECCTTTCHHHHHHHHH-----
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEE-EcCchhhhhhc-----cCCceEEEECCCCCcHHHHHHhhc-----
Confidence            46789999999999999999999998 8998885 55544332211     13578899999998764 555554     


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCC-----------
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGN-----------  170 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~-----------  170 (269)
                        ++|+|||+||......    ..++.++.+++|+.++..+++++.+    .+ +++|++||...+...           
T Consensus       382 --~~D~Vih~Aa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~aa~~----~~-~r~V~~SS~~vyg~~~~~~~~E~~~~  450 (660)
T 1z7e_A          382 --KCDVVLPLVAIATPIE----YTRNPLRVFELDFEENLRIIRYCVK----YR-KRIIFPSTSEVYGMCSDKYFDEDHSN  450 (660)
T ss_dssp             --HCSEEEECCCCCCTHH----HHHSHHHHHHHHTHHHHHHHHHHHH----TT-CEEEEECCGGGGBTCCSSSBCTTTCC
T ss_pred             --CCCEEEECceecCccc----cccCHHHHHHhhhHHHHHHHHHHHH----hC-CEEEEEecHHHcCCCCCcccCCCccc
Confidence              6899999999754321    1345678999999999888887754    34 799999997654221           


Q ss_pred             -------CCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccc----------cChHHHHHHHhcCCC--
Q 024338          171 -------IGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAK----------LGEDLEKKILEKIPL--  231 (269)
Q Consensus       171 -------~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~----------~~~~~~~~~~~~~~~--  231 (269)
                             ++...|+.||.+.+.+++.++.+.   |++++.++||.+.++....          ....+......+.+.  
T Consensus       451 ~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  527 (660)
T 1z7e_A          451 LIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKL  527 (660)
T ss_dssp             EEECCTTCTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEE
T ss_pred             cccCcccCCCCCcHHHHHHHHHHHHHHHHHc---CCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEE
Confidence                   123379999999999999988765   8999999999999886432          112333333333322  


Q ss_pred             -------CCCCCHHHHHHHHHHhccCCCCCCccccEEEecCC
Q 024338          232 -------GRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGG  266 (269)
Q Consensus       232 -------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg  266 (269)
                             ..+.+++|+|++++.++..+. ...+|+++++++|
T Consensus       528 ~g~g~~~~~~i~v~Dva~ai~~~l~~~~-~~~~g~~~ni~~~  568 (660)
T 1z7e_A          528 IDGGKQKRCFTDIRDGIEALYRIIENAG-NRCDGEIINIGNP  568 (660)
T ss_dssp             EGGGCCEEECEEHHHHHHHHHHHHHCGG-GTTTTEEEEECCG
T ss_pred             eCCCCeEEEEEEHHHHHHHHHHHHhCcc-ccCCCeEEEECCC
Confidence                   135579999999999985432 2457899999887

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.86  E-value=4.1e-21  Score=166.84  Aligned_cols=218  Identities=11%  Similarity=0.023  Sum_probs=148.9

Q ss_pred             cccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHH
Q 024338           19 EAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTA   98 (269)
Q Consensus        19 ~~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~   98 (269)
                      .+...++++++|||||+|+||.+++++|+++|++|+++ .|+.....+..+.+. ...++.++.+|+.+..         
T Consensus        20 ~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~---------   88 (343)
T 2b69_A           20 QGHMEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVV-DNFFTGRKRNVEHWI-GHENFELINHDVVEPL---------   88 (343)
T ss_dssp             -------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECCSSCCGGGTGGGT-TCTTEEEEECCTTSCC---------
T ss_pred             ccccccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEE-eCCCccchhhhhhhc-cCCceEEEeCccCChh---------
Confidence            33355678999999999999999999999999999886 443221111111111 1346888999998742         


Q ss_pred             HHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcccc----------
Q 024338           99 VDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLV----------  168 (269)
Q Consensus        99 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~----------  168 (269)
                         +.++|+|||+||.......    .++.++.+++|+.++..+++++.+.    + .++|++||...+-          
T Consensus        89 ---~~~~d~vih~A~~~~~~~~----~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~v~~SS~~v~g~~~~~~~~E~  156 (343)
T 2b69_A           89 ---YIEVDQIYHLASPASPPNY----MYNPIKTLKTNTIGTLNMLGLAKRV----G-ARLLLASTSEVYGDPEVHPQSED  156 (343)
T ss_dssp             ---CCCCSEEEECCSCCSHHHH----TTCHHHHHHHHHHHHHHHHHHHHHH----T-CEEEEEEEGGGGBSCSSSSBCTT
T ss_pred             ---hcCCCEEEECccccCchhh----hhCHHHHHHHHHHHHHHHHHHHHHh----C-CcEEEECcHHHhCCCCCCCCccc
Confidence               4579999999996532111    1245678999999999999888652    3 4999999976542          


Q ss_pred             ------CCCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc----ChHHHHHHHhcCCC-------
Q 024338          169 ------GNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL----GEDLEKKILEKIPL-------  231 (269)
Q Consensus       169 ------~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~----~~~~~~~~~~~~~~-------  231 (269)
                            +..+...|+.+|.+.+.+++.++.+.   |++++.++||.+.+|.....    ...+......+.+.       
T Consensus       157 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (343)
T 2b69_A          157 YWGHVNPIGPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGS  233 (343)
T ss_dssp             CCCBCCSSSTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSC
T ss_pred             ccccCCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCC
Confidence                  22345679999999999999988765   89999999999998864321    12233333332221       


Q ss_pred             --CCCCCHHHHHHHHHHhccCCCCCCccccEEEecCCc
Q 024338          232 --GRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM  267 (269)
Q Consensus       232 --~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg~  267 (269)
                        ..+..++|+|++++.++..+     .++++++.+|.
T Consensus       234 ~~~~~v~v~Dva~a~~~~~~~~-----~~~~~~i~~~~  266 (343)
T 2b69_A          234 QTRAFQYVSDLVNGLVALMNSN-----VSSPVNLGNPE  266 (343)
T ss_dssp             CEEECEEHHHHHHHHHHHHTSS-----CCSCEEESCCC
T ss_pred             eEEeeEeHHHHHHHHHHHHhcC-----CCCeEEecCCC
Confidence              13458999999999998542     25678877653

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.85  E-value=7e-21  Score=162.96  Aligned_cols=214  Identities=15%  Similarity=0.103  Sum_probs=152.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHc--CCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           26 APVAVVTGASRGIGRAVATSLGKA--GCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~--G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      +|++|||||+|+||.+++++|+++  |++|+++ .|+.... .+.       .++.++.+|++|.+++++++++.     
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~-~r~~~~~-~~~-------~~~~~~~~D~~d~~~~~~~~~~~-----   67 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIAS-DIRKLNT-DVV-------NSGPFEVVNALDFNQIEHLVEVH-----   67 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEE-ESCCCSC-HHH-------HSSCEEECCTTCHHHHHHHHHHT-----
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEE-cCCCccc-ccc-------CCCceEEecCCCHHHHHHHHhhc-----
Confidence            477999999999999999999999  8999986 4543321 111       13557899999999998888753     


Q ss_pred             CccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCC------------C
Q 024338          104 TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGN------------I  171 (269)
Q Consensus       104 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~------------~  171 (269)
                      ++|+|||+||.....     ..++.++.+++|+.++..+++++.+    .+.+++|++||...+.+.            .
T Consensus        68 ~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~  138 (312)
T 2yy7_A           68 KITDIYLMAALLSAT-----AEKNPAFAWDLNMNSLFHVLNLAKA----KKIKKIFWPSSIAVFGPTTPKENTPQYTIME  138 (312)
T ss_dssp             TCCEEEECCCCCHHH-----HHHCHHHHHHHHHHHHHHHHHHHHT----TSCSEEECCEEGGGCCTTSCSSSBCSSCBCC
T ss_pred             CCCEEEECCccCCCc-----hhhChHHHHHHHHHHHHHHHHHHHH----cCCCEEEEeccHHHhCCCCCCCCccccCcCC
Confidence            799999999964321     2346788999999998888887754    456799999998665331            2


Q ss_pred             CChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC-------hHHHHHHHhcC-C-C------CCCCC
Q 024338          172 GQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG-------EDLEKKILEKI-P-L------GRYGQ  236 (269)
Q Consensus       172 ~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~-------~~~~~~~~~~~-~-~------~~~~~  236 (269)
                      +...|+.+|.+.+.+++.++.++   |++++.+.||.+.++...+..       ..+......+. + .      ..+.+
T Consensus       139 ~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  215 (312)
T 2yy7_A          139 PSTVYGISKQAGERWCEYYHNIY---GVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMY  215 (312)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHH---CCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEE
T ss_pred             CCchhHHHHHHHHHHHHHHHHhc---CCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeee
Confidence            35689999999999999888765   899999999999886432211       11122222211 0 1      12346


Q ss_pred             HHHHHHHHHHhccCCCCCCccccEEEecC
Q 024338          237 PEEVAGLVEFLALNPAAGYITGQVLTIDG  265 (269)
Q Consensus       237 ~~~~a~~~~~l~~~~~~~~~~G~~i~~dg  265 (269)
                      ++|+|++++.++..+....-.|+++++.+
T Consensus       216 v~Dva~a~~~~~~~~~~~~~~~~~~ni~~  244 (312)
T 2yy7_A          216 MDDAIDATINIMKAPVEKIKIHSSYNLAA  244 (312)
T ss_dssp             HHHHHHHHHHHHHSCGGGCCCSSCEECCS
T ss_pred             HHHHHHHHHHHHhCcccccccCceEEeCC
Confidence            89999999999865432111247888754

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.85  E-value=3.2e-22  Score=162.31  Aligned_cols=195  Identities=12%  Similarity=0.047  Sum_probs=143.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC--cEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGC--KVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~--~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      .+|++|||||+|+||.+++++|+++|+  +|+++ .|+++.          ...++.++.+|++|.+++++++       
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~-~r~~~~----------~~~~~~~~~~D~~~~~~~~~~~-------   65 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAP-ARKALA----------EHPRLDNPVGPLAELLPQLDGS-------   65 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECC-BSSCCC----------CCTTEECCBSCHHHHGGGCCSC-------
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEE-eCCCcc----------cCCCceEEeccccCHHHHHHhh-------
Confidence            368999999999999999999999998  88774 666543          1346788899999887665544       


Q ss_pred             CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHH
Q 024338          103 GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAG  182 (269)
Q Consensus       103 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  182 (269)
                        +|+||||||....      +.+++++.+++|+.++..+++++.+    .+.+++|++||.....+  +...|+.+|.+
T Consensus        66 --~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~--~~~~y~~sK~~  131 (215)
T 2a35_A           66 --IDTAFCCLGTTIK------EAGSEEAFRAVDFDLPLAVGKRALE----MGARHYLVVSALGADAK--SSIFYNRVKGE  131 (215)
T ss_dssp             --CSEEEECCCCCHH------HHSSHHHHHHHHTHHHHHHHHHHHH----TTCCEEEEECCTTCCTT--CSSHHHHHHHH
T ss_pred             --hcEEEECeeeccc------cCCCHHHHHHhhHHHHHHHHHHHHH----cCCCEEEEECCcccCCC--CccHHHHHHHH
Confidence              8999999996432      2346788999999999888888754    45679999999877643  45689999999


Q ss_pred             HHHHHHHHHHHhccCCeE-EEEEecCCccCCcccc-cChHHHHHHHhcCCC----CCCCCHHHHHHHHHHhccCCCCCCc
Q 024338          183 VIGLTKTVAKEYASRNIN-VNAIAPGFIASDMTAK-LGEDLEKKILEKIPL----GRYGQPEEVAGLVEFLALNPAAGYI  256 (269)
Q Consensus       183 l~~~~~~la~e~~~~gi~-v~~v~pG~v~t~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~a~~~~~l~~~~~~~~~  256 (269)
                      ++.+++.       .|++ ++.++||.+.++.... ..+...   ....+.    ..+.+++|+|++++.++..+.    
T Consensus       132 ~e~~~~~-------~~~~~~~~vrp~~v~g~~~~~~~~~~~~---~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~----  197 (215)
T 2a35_A          132 LEQALQE-------QGWPQLTIARPSLLFGPREEFRLAEILA---APIARILPGKYHGIEACDLARALWRLALEEG----  197 (215)
T ss_dssp             HHHHHTT-------SCCSEEEEEECCSEESTTSCEEGGGGTT---CCCC----CHHHHHHHHHHHHHHHHHHTCCC----
T ss_pred             HHHHHHH-------cCCCeEEEEeCceeeCCCCcchHHHHHH---HhhhhccCCCcCcEeHHHHHHHHHHHHhcCC----
Confidence            9888764       3898 9999999999885431 111110   000111    123468999999999996542    


Q ss_pred             cccEEEecCC
Q 024338          257 TGQVLTIDGG  266 (269)
Q Consensus       257 ~G~~i~~dgg  266 (269)
                       ++.+++.++
T Consensus       198 -~~~~~i~~~  206 (215)
T 2a35_A          198 -KGVRFVESD  206 (215)
T ss_dssp             -SEEEEEEHH
T ss_pred             -CCceEEcHH
Confidence             567776554

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.85  E-value=2.8e-20  Score=159.63  Aligned_cols=210  Identities=12%  Similarity=0.094  Sum_probs=149.8

Q ss_pred             EEEEeCCCCchHHHHHHHHHHc--CCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Q 024338           28 VAVVTGASRGIGRAVATSLGKA--GCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTV  105 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~--G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i  105 (269)
                      ++|||||+|+||.+++++|+++  |++|+++. |+.+...           .+.++.+|++|.+++.+++++.     ++
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~-r~~~~~~-----------~~~~~~~D~~d~~~~~~~~~~~-----~~   63 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASD-IVQRDTG-----------GIKFITLDVSNRDEIDRAVEKY-----SI   63 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEE-SSCCCCT-----------TCCEEECCTTCHHHHHHHHHHT-----TC
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEec-CCCcccc-----------CceEEEecCCCHHHHHHHHhhc-----CC
Confidence            3899999999999999999999  89998854 4332211           3457899999999998888752     79


Q ss_pred             cEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCC------------CCC
Q 024338          106 DILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGN------------IGQ  173 (269)
Q Consensus       106 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~------------~~~  173 (269)
                      |+|||+|+....     ...++.+..+++|+.++..+++++.+    .+.+++|++||...+.+.            .+.
T Consensus        64 d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~  134 (317)
T 3ajr_A           64 DAIFHLAGILSA-----KGEKDPALAYKVNMNGTYNILEAAKQ----HRVEKVVIPSTIGVFGPETPKNKVPSITITRPR  134 (317)
T ss_dssp             CEEEECCCCCHH-----HHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCC
T ss_pred             cEEEECCcccCC-----ccccChHHHhhhhhHHHHHHHHHHHH----cCCCEEEEecCHHHhCCCCCCCCccccccCCCC
Confidence            999999996432     12345788999999999999888754    456799999998765432            146


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc---ChH----HHHHHHhcCC--C------CCCCCHH
Q 024338          174 ANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL---GED----LEKKILEKIP--L------GRYGQPE  238 (269)
Q Consensus       174 ~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~---~~~----~~~~~~~~~~--~------~~~~~~~  238 (269)
                      ..|+.+|.+.+.+++.++.++   |++++.+.|+.+..+...+.   .+.    +......+..  .      ..+..++
T Consensus       135 ~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  211 (317)
T 3ajr_A          135 TMFGVTKIAAELLGQYYYEKF---GLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMP  211 (317)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHH
T ss_pred             chHHHHHHHHHHHHHHHHHhc---CCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHH
Confidence            789999999999999887654   89999998766665432111   111    1111211110  0      1133689


Q ss_pred             HHHHHHHHhccCCCCCCccccEEEecCC
Q 024338          239 EVAGLVEFLALNPAAGYITGQVLTIDGG  266 (269)
Q Consensus       239 ~~a~~~~~l~~~~~~~~~~G~~i~~dgg  266 (269)
                      |+|++++.++..+...+.+|+++++.++
T Consensus       212 Dva~a~~~~l~~~~~~~~~g~~~~i~~~  239 (317)
T 3ajr_A          212 DALKALVDLYEADRDKLVLRNGYNVTAY  239 (317)
T ss_dssp             HHHHHHHHHHHCCGGGCSSCSCEECCSE
T ss_pred             HHHHHHHHHHhCCccccccCceEecCCc
Confidence            9999999988665444446788888754

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.85  E-value=4.2e-20  Score=158.80  Aligned_cols=206  Identities=13%  Similarity=0.098  Sum_probs=150.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      .++++|||||+|+||.+++++|+++|++|+++ .|+.                    .+|++|.+++++++++.     +
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~-~r~~--------------------~~D~~d~~~~~~~~~~~-----~   55 (321)
T 1e6u_A            2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVL-RTRD--------------------ELNLLDSRAVHDFFASE-----R   55 (321)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEC-CCTT--------------------TCCTTCHHHHHHHHHHH-----C
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEE-ecCc--------------------cCCccCHHHHHHHHHhc-----C
Confidence            35789999999999999999999999998874 5542                    37999999998888764     7


Q ss_pred             ccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccC---------------
Q 024338          105 VDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVG---------------  169 (269)
Q Consensus       105 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~---------------  169 (269)
                      +|+|||+|+.....   ....++.++.+++|+.++..+++++.+    .+.+++|++||...+-.               
T Consensus        56 ~d~vih~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~  128 (321)
T 1e6u_A           56 IDQVYLAAAKVGGI---VANNTYPADFIYQNMMIESNIIHAAHQ----NDVNKLLFLGSSCIYPKLAKQPMAESELLQGT  128 (321)
T ss_dssp             CSEEEECCCCCCCH---HHHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEECCGGGSCTTCCSSBCGGGTTSSC
T ss_pred             CCEEEEcCeecCCc---chhhhCHHHHHHHHHHHHHHHHHHHHH----hCCCeEEEEccHHHcCCCCCCCcCccccccCC
Confidence            99999999965321   112345678899999998888887754    45579999999865421               


Q ss_pred             C-CCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccc------cChHHHHHHHh-------cCC-C---
Q 024338          170 N-IGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAK------LGEDLEKKILE-------KIP-L---  231 (269)
Q Consensus       170 ~-~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~------~~~~~~~~~~~-------~~~-~---  231 (269)
                      . |....|+.+|.+.+.+++.++.+.   |++++.++||.+.+|....      ....+......       ..+ .   
T Consensus       129 ~~p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g  205 (321)
T 1e6u_A          129 LEPTNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSG  205 (321)
T ss_dssp             CCGGGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCS
T ss_pred             CCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCC
Confidence            1 113589999999999999988765   8999999999999886432      12233333221       111 1   


Q ss_pred             ---CCCCCHHHHHHHHHHhccCCCCC-----CccccEEEecCC
Q 024338          232 ---GRYGQPEEVAGLVEFLALNPAAG-----YITGQVLTIDGG  266 (269)
Q Consensus       232 ---~~~~~~~~~a~~~~~l~~~~~~~-----~~~G~~i~~dgg  266 (269)
                         ..+.+++|+|++++.++..+...     ...|+++++.+|
T Consensus       206 ~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~  248 (321)
T 1e6u_A          206 TPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTG  248 (321)
T ss_dssp             CCEECEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCS
T ss_pred             CEEEEeEEHHHHHHHHHHHHhCcccccccccccCCceEEeCCC
Confidence               13457999999999998654310     113688888665

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.84  E-value=7e-20  Score=166.17  Aligned_cols=223  Identities=15%  Similarity=0.160  Sum_probs=153.0

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHc---CCcEEEEecCCHHHHHH---HHHH-----------HH-HcCCcEEEEE
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKA---GCKVLVNYARSSKEAEE---VCKE-----------IE-ASGGQALTFG   82 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~---G~~v~i~~~r~~~~~~~---~~~~-----------l~-~~~~~~~~~~   82 (269)
                      ....++|+||||||+|+||.+++++|+++   |++|+++ .|+......   +.+.           +. ....++.++.
T Consensus        68 ~~~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l-~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~  146 (478)
T 4dqv_A           68 GPSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICL-VRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVA  146 (478)
T ss_dssp             CCCSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEE-ECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEE
T ss_pred             CCCCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEE-ECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEE
Confidence            35678999999999999999999999999   8999986 555433221   1111           11 1246899999


Q ss_pred             ccCC------CHHHHHHHHHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCC
Q 024338           83 GDVS------KEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKG  156 (269)
Q Consensus        83 ~Dls------~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~  156 (269)
                      +|++      |.++++++++       ++|+||||||....        +.+++.+++|+.++..+++++.    +.+.+
T Consensus       147 ~Dl~~~~~gld~~~~~~~~~-------~~D~Vih~Aa~~~~--------~~~~~~~~~Nv~gt~~ll~aa~----~~~~~  207 (478)
T 4dqv_A          147 GDKSEPDLGLDQPMWRRLAE-------TVDLIVDSAAMVNA--------FPYHELFGPNVAGTAELIRIAL----TTKLK  207 (478)
T ss_dssp             CCTTSGGGGCCHHHHHHHHH-------HCCEEEECCSSCSB--------SSCCEEHHHHHHHHHHHHHHHT----SSSCC
T ss_pred             eECCCcccCCCHHHHHHHHc-------CCCEEEECccccCC--------cCHHHHHHHHHHHHHHHHHHHH----hCCCC
Confidence            9999      5566666665       68999999997643        2345678999999888887764    34557


Q ss_pred             eEEEEcCCccccCCCC----------------------ChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcc
Q 024338          157 RIINIASVVGLVGNIG----------------------QANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMT  214 (269)
Q Consensus       157 ~iv~isS~~~~~~~~~----------------------~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~  214 (269)
                      ++|++||.........                      ...|+.||.+.+.+++.++.+.   |+++++++||.+.++..
T Consensus       208 ~~V~iSS~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ivRpg~v~G~~~  284 (478)
T 4dqv_A          208 PFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLC---ALPVAVFRCGMILADTS  284 (478)
T ss_dssp             CEEEEEEGGGGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECCSS
T ss_pred             eEEEEeehhhcCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHh---CCCeEEEECceeeCCCc
Confidence            9999999754332111                      1349999999999999888765   89999999999987632


Q ss_pred             -c---ccCh---HHHHHHHh--cCC---------------CCCCCCHHHHHHHHHHhccCCCC-CCccccEEEecCC
Q 024338          215 -A---KLGE---DLEKKILE--KIP---------------LGRYGQPEEVAGLVEFLALNPAA-GYITGQVLTIDGG  266 (269)
Q Consensus       215 -~---~~~~---~~~~~~~~--~~~---------------~~~~~~~~~~a~~~~~l~~~~~~-~~~~G~~i~~dgg  266 (269)
                       .   +...   .+......  ..|               ...+.+++|+|++++.++..... ....|+++++.++
T Consensus       285 ~~g~~~~~~~~~~l~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~  361 (478)
T 4dqv_A          285 YAGQLNMSDWVTRMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNP  361 (478)
T ss_dssp             SSSCCCTTBHHHHHHHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCC
T ss_pred             cCCcCCHHHHHHHHHHHHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCC
Confidence             1   1111   12211111  111               11345789999999999754110 1235788888665

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.84  E-value=1.4e-20  Score=159.42  Aligned_cols=192  Identities=12%  Similarity=0.130  Sum_probs=144.8

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCccE
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDI  107 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~  107 (269)
                      ++|||||+|+||.++++.|+++|++|+++ .|                     .++|++|.+++.+++++.     ++|+
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~-~r---------------------~~~D~~d~~~~~~~~~~~-----~~d~   59 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPF-DK---------------------KLLDITNISQVQQVVQEI-----RPHI   59 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEE-CT---------------------TTSCTTCHHHHHHHHHHH-----CCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEe-cc---------------------cccCCCCHHHHHHHHHhc-----CCCE
Confidence            79999999999999999999999999885 55                     237999999999988865     7999


Q ss_pred             EEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccC-----------CCCChhh
Q 024338          108 LINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVG-----------NIGQANY  176 (269)
Q Consensus       108 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~-----------~~~~~~Y  176 (269)
                      |||+|+......    ..+++++.+++|+.++..+++++.+.    + .++|++||...+.+           ..+...|
T Consensus        60 vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y  130 (287)
T 3sc6_A           60 IIHCAAYTKVDQ----AEKERDLAYVINAIGARNVAVASQLV----G-AKLVYISTDYVFQGDRPEGYDEFHNPAPINIY  130 (287)
T ss_dssp             EEECCCCCCHHH----HTTCHHHHHHHHTHHHHHHHHHHHHH----T-CEEEEEEEGGGSCCCCSSCBCTTSCCCCCSHH
T ss_pred             EEECCcccChHH----HhcCHHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEchhhhcCCCCCCCCCCCCCCCCCCHH
Confidence            999999764211    12467889999999999999888652    2 38999999865532           2245689


Q ss_pred             HHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCC-------CCCCCHHHHHHHHHHhcc
Q 024338          177 SAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPL-------GRYGQPEEVAGLVEFLAL  249 (269)
Q Consensus       177 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~a~~~~~l~~  249 (269)
                      +.+|.+.+.+++.++.       +++.+.|+.+.+|........+........+.       ..+.+++|+|+++++++.
T Consensus       131 ~~sK~~~E~~~~~~~~-------~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~  203 (287)
T 3sc6_A          131 GASKYAGEQFVKELHN-------KYFIVRTSWLYGKYGNNFVKTMIRLGKEREEISVVADQIGSPTYVADLNVMINKLIH  203 (287)
T ss_dssp             HHHHHHHHHHHHHHCS-------SEEEEEECSEECSSSCCHHHHHHHHHTTCSEEEEECSCEECCEEHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhCC-------CcEEEeeeeecCCCCCcHHHHHHHHHHcCCCeEeecCcccCceEHHHHHHHHHHHHh
Confidence            9999999988876643       46899999998875444333444333332222       234569999999999996


Q ss_pred             CCCCCCccccEEEecCCc
Q 024338          250 NPAAGYITGQVLTIDGGM  267 (269)
Q Consensus       250 ~~~~~~~~G~~i~~dgg~  267 (269)
                      .+.     ++++++.+|.
T Consensus       204 ~~~-----~~~~~i~~~~  216 (287)
T 3sc6_A          204 TSL-----YGTYHVSNTG  216 (287)
T ss_dssp             SCC-----CEEEECCCBS
T ss_pred             CCC-----CCeEEEcCCC
Confidence            542     5688887764

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.84  E-value=6.6e-20  Score=155.14  Aligned_cols=196  Identities=12%  Similarity=0.030  Sum_probs=141.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHc--CCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           27 PVAVVTGASRGIGRAVATSLGKA--GCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~--G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      |++|||||+|+||.+++++|+++  |++|+++ .|+++..+.+.    .  ..+.++.+|++|.+++.++++       +
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~-~r~~~~~~~l~----~--~~~~~~~~D~~d~~~l~~~~~-------~   66 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAI-VRNVEKASTLA----D--QGVEVRHGDYNQPESLQKAFA-------G   66 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEE-ESCTTTTHHHH----H--TTCEEEECCTTCHHHHHHHTT-------T
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEE-EcCHHHHhHHh----h--cCCeEEEeccCCHHHHHHHHh-------c
Confidence            46999999999999999999999  9999985 56655443332    1  356789999999998887765       6


Q ss_pred             ccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHHH
Q 024338          105 VDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVI  184 (269)
Q Consensus       105 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~  184 (269)
                      +|+|||+|+...       . +      ++|+.++..+++++.    +.+.+++|++||.....   ....|+.+|.+.+
T Consensus        67 ~d~vi~~a~~~~-------~-~------~~n~~~~~~l~~a~~----~~~~~~~v~~Ss~~~~~---~~~~y~~~K~~~E  125 (287)
T 2jl1_A           67 VSKLLFISGPHY-------D-N------TLLIVQHANVVKAAR----DAGVKHIAYTGYAFAEE---SIIPLAHVHLATE  125 (287)
T ss_dssp             CSEEEECCCCCS-------C-H------HHHHHHHHHHHHHHH----HTTCSEEEEEEETTGGG---CCSTHHHHHHHHH
T ss_pred             CCEEEEcCCCCc-------C-c------hHHHHHHHHHHHHHH----HcCCCEEEEECCCCCCC---CCCchHHHHHHHH
Confidence            899999998521       1 1      578888777777664    35567999999987642   2348999999998


Q ss_pred             HHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHh----cCCCCCCCCHHHHHHHHHHhccCCCCCCccccE
Q 024338          185 GLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILE----KIPLGRYGQPEEVAGLVEFLALNPAAGYITGQV  260 (269)
Q Consensus       185 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~  260 (269)
                      .+++.       .|++++.+.||++.++...............    ......+.+++|+|++++.++..+.   .+|++
T Consensus       126 ~~~~~-------~~~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~---~~g~~  195 (287)
T 2jl1_A          126 YAIRT-------TNIPYTFLRNALYTDFFVNEGLRASTESGAIVTNAGSGIVNSVTRNELALAAATVLTEEG---HENKT  195 (287)
T ss_dssp             HHHHH-------TTCCEEEEEECCBHHHHSSGGGHHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHTSSS---CTTEE
T ss_pred             HHHHH-------cCCCeEEEECCEeccccchhhHHHHhhCCceeccCCCCccCccCHHHHHHHHHHHhcCCC---CCCcE
Confidence            88752       5899999999988766422221111111000    0112346689999999999985532   36899


Q ss_pred             EEecCCc
Q 024338          261 LTIDGGM  267 (269)
Q Consensus       261 i~~dgg~  267 (269)
                      +++.+|.
T Consensus       196 ~~i~~~~  202 (287)
T 2jl1_A          196 YNLVSNQ  202 (287)
T ss_dssp             EEECCSS
T ss_pred             EEecCCC
Confidence            9998873

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.84  E-value=1.2e-20  Score=161.32  Aligned_cols=211  Identities=12%  Similarity=0.116  Sum_probs=148.2

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcC-CcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCcc
Q 024338           28 VAVVTGASRGIGRAVATSLGKAG-CKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVD  106 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G-~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id  106 (269)
                      ++|||||+|+||.+++++|+++| +.|+++ .|+.....  ...+..  ..   +.+|++|.++++++++...  ++++|
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~-~r~~~~~~--~~~~~~--~~---~~~d~~~~~~~~~~~~~~~--~~~~d   70 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVV-DNLKDGTK--FVNLVD--LN---IADYMDKEDFLIQIMAGEE--FGDVE   70 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEE-ECCSSGGG--GHHHHT--SC---CSEEEEHHHHHHHHHTTCC--CSSCC
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEE-ccCCCCch--hhhcCc--ce---eccccccHHHHHHHHhccc--cCCCc
Confidence            38999999999999999999999 888885 55443210  111211  12   6789998888777665210  23699


Q ss_pred             EEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCC-----------CCChh
Q 024338          107 ILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGN-----------IGQAN  175 (269)
Q Consensus       107 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~-----------~~~~~  175 (269)
                      +|||+||....      ..++.++.+++|+.++..+++++.+    .+. ++|++||...+...           .+...
T Consensus        71 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~a~~~----~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~  139 (310)
T 1eq2_A           71 AIFHEGACSST------TEWDGKYMMDNNYQYSKELLHYCLE----REI-PFLYASSAATYGGRTSDFIESREYEKPLNV  139 (310)
T ss_dssp             EEEECCSCCCT------TCCCHHHHHHHTHHHHHHHHHHHHH----HTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSH
T ss_pred             EEEECcccccC------cccCHHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEeeHHHhCCCCCCCCCCCCCCCCCCh
Confidence            99999997543      2235678999999999999988865    244 99999998654322           22568


Q ss_pred             hHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccc------cChHHHHHHHhcC---------C-CCCCCCHHH
Q 024338          176 YSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAK------LGEDLEKKILEKI---------P-LGRYGQPEE  239 (269)
Q Consensus       176 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~------~~~~~~~~~~~~~---------~-~~~~~~~~~  239 (269)
                      |+.+|.+.+.+++.++.+   .|++++.++||.+.+|....      ....+......+.         . ...+.+++|
T Consensus       140 Y~~sK~~~e~~~~~~~~~---~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~D  216 (310)
T 1eq2_A          140 YGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGD  216 (310)
T ss_dssp             HHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHH
T ss_pred             hHHHHHHHHHHHHHHHHH---cCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHH
Confidence            999999999999887754   48999999999999886431      1122222222211         1 234457999


Q ss_pred             HHHHHHHhccCCCCCCccccEEEecCCc
Q 024338          240 VAGLVEFLALNPAAGYITGQVLTIDGGM  267 (269)
Q Consensus       240 ~a~~~~~l~~~~~~~~~~G~~i~~dgg~  267 (269)
                      +|++++.++..+.     |+++++.+|.
T Consensus       217 va~~~~~~~~~~~-----~~~~~i~~~~  239 (310)
T 1eq2_A          217 VADVNLWFLENGV-----SGIFNLGTGR  239 (310)
T ss_dssp             HHHHHHHHHHHCC-----CEEEEESCSC
T ss_pred             HHHHHHHHHhcCC-----CCeEEEeCCC
Confidence            9999999986432     7899987763

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.83  E-value=7.1e-20  Score=173.39  Aligned_cols=178  Identities=12%  Similarity=0.103  Sum_probs=128.6

Q ss_pred             ccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHH-cCCcEEEEEccCCCHHHHHHHHHHH
Q 024338           20 AAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEA-SGGQALTFGGDVSKEADVESMIKTA   98 (269)
Q Consensus        20 ~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dls~~~~~~~~~~~~   98 (269)
                      +++.+++|++|||||+|+||.+++++|+++|++|+++ .|+.....+..+.+.. ...++.++.+|++|.+++++++++.
T Consensus         5 ~~~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~-~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~   83 (699)
T 1z45_A            5 LQSESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVA-DNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY   83 (699)
T ss_dssp             ------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS
T ss_pred             cccccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEE-ECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhC
Confidence            3466788999999999999999999999999999885 4433211111112211 1356778999999999998887753


Q ss_pred             HHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccC---------
Q 024338           99 VDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVG---------  169 (269)
Q Consensus        99 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~---------  169 (269)
                           ++|+|||+||......    ..+..++.+++|+.++..+++++.    +.+.+++|++||...+-.         
T Consensus        84 -----~~D~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~~iV~~SS~~vyg~~~~~~~~~~  150 (699)
T 1z45_A           84 -----KIDSVIHFAGLKAVGE----STQIPLRYYHNNILGTVVLLELMQ----QYNVSKFVFSSSATVYGDATRFPNMIP  150 (699)
T ss_dssp             -----CCCEEEECCSCCCHHH----HHHSHHHHHHHHHHHHHHHHHHHH----HHTCCEEEEEEEGGGGCCGGGSTTCCS
T ss_pred             -----CCCEEEECCcccCcCc----cccCHHHHHHHHHHHHHHHHHHHH----HcCCCEEEEECcHHHhCCCccccccCC
Confidence                 7999999999754221    122346789999999888877654    345679999999765321         


Q ss_pred             ------CCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCC
Q 024338          170 ------NIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASD  212 (269)
Q Consensus       170 ------~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~  212 (269)
                            ..+...|+.+|.+.+.+++.++.+. ..|+++..++|+.+..+
T Consensus       151 ~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~g~~~~ilR~~~vyG~  198 (699)
T 1z45_A          151 IPEECPLGPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPIGA  198 (699)
T ss_dssp             BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEECC
T ss_pred             ccccCCCCCCChHHHHHHHHHHHHHHHHHhc-cCCCcEEEEEeccccCC
Confidence                  1234689999999999999998775 35899999999888765

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.83  E-value=7.7e-20  Score=153.53  Aligned_cols=192  Identities=18%  Similarity=0.123  Sum_probs=138.8

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCccE
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDI  107 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~  107 (269)
                      ++|||||+|+||.+++++|+ +|++|+++ .|+++. .        .  .   +.+|++|.++++++++..     ++|+
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~-~r~~~~-~--------~--~---~~~Dl~~~~~~~~~~~~~-----~~d~   60 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLS-ERHEVIKV-YNSSEI-Q--------G--G---YKLDLTDFPRLEDFIIKK-----RPDV   60 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHT-TTSCEEEE-ESSSCC-T--------T--C---EECCTTSHHHHHHHHHHH-----CCSE
T ss_pred             EEEEECCCChhHHHHHHHHh-cCCeEEEe-cCCCcC-C--------C--C---ceeccCCHHHHHHHHHhc-----CCCE
Confidence            59999999999999999999 48999885 555421 0        1  1   889999999999988865     7999


Q ss_pred             EEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCC----------CChhhH
Q 024338          108 LINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNI----------GQANYS  177 (269)
Q Consensus       108 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~----------~~~~Y~  177 (269)
                      ||||||.....    .+.+++++.+++|+.++..+++++.+    .+ +++|++||...+.+.+          +...|+
T Consensus        61 vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~iv~~SS~~~~~~~~~~~~e~~~~~~~~~Y~  131 (273)
T 2ggs_A           61 IINAAAMTDVD----KCEIEKEKAYKINAEAVRHIVRAGKV----ID-SYIVHISTDYVFDGEKGNYKEEDIPNPINYYG  131 (273)
T ss_dssp             EEECCCCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHHH----TT-CEEEEEEEGGGSCSSSCSBCTTSCCCCSSHHH
T ss_pred             EEECCcccChh----hhhhCHHHHHHHhHHHHHHHHHHHHH----hC-CeEEEEecceeEcCCCCCcCCCCCCCCCCHHH
Confidence            99999965421    23467889999999999999998864    33 5999999988765433          357899


Q ss_pred             HhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCC------CCCCCCHHHHHHHHHHhccCC
Q 024338          178 AAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIP------LGRYGQPEEVAGLVEFLALNP  251 (269)
Q Consensus       178 ~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~a~~~~~l~~~~  251 (269)
                      .+|++++.+++.         +....+.|+.+..+  ......+........+      ...+.+++|+|++++++++.+
T Consensus       132 ~sK~~~e~~~~~---------~~~~~iR~~~v~G~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~~~~~~  200 (273)
T 2ggs_A          132 LSKLLGETFALQ---------DDSLIIRTSGIFRN--KGFPIYVYKTLKEGKTVFAFKGYYSPISARKLASAILELLELR  200 (273)
T ss_dssp             HHHHHHHHHHCC---------TTCEEEEECCCBSS--SSHHHHHHHHHHTTCCEEEESCEECCCBHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhC---------CCeEEEeccccccc--cHHHHHHHHHHHcCCCEEeecCCCCceEHHHHHHHHHHHHhcC
Confidence            999999998876         23455666665531  1111222222223222      345678999999999999643


Q ss_pred             CCCCccccEEEecC
Q 024338          252 AAGYITGQVLTIDG  265 (269)
Q Consensus       252 ~~~~~~G~~i~~dg  265 (269)
                          .+| ++++++
T Consensus       201 ----~~g-~~~i~~  209 (273)
T 2ggs_A          201 ----KTG-IIHVAG  209 (273)
T ss_dssp             ----CCE-EEECCC
T ss_pred             ----cCC-eEEECC
Confidence                134 788876

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.83  E-value=2e-19  Score=153.68  Aligned_cols=209  Identities=13%  Similarity=0.078  Sum_probs=148.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      .++++++|||||+|+||.+++++|+++|+       +..           .....+..+.+|++|.+++.++++..    
T Consensus         3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-------~~~-----------~~~~~~~~~~~D~~d~~~~~~~~~~~----   60 (319)
T 4b8w_A            3 YFQSMRILVTGGSGLVGKAIQKVVADGAG-------LPG-----------EDWVFVSSKDADLTDTAQTRALFEKV----   60 (319)
T ss_dssp             CCCCCEEEEETCSSHHHHHHHHHHHTTTC-------CTT-----------CEEEECCTTTCCTTSHHHHHHHHHHS----
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhcCC-------ccc-----------ccccccCceecccCCHHHHHHHHhhc----
Confidence            35689999999999999999999999998       000           00012223478999999999888753    


Q ss_pred             CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccC-------------
Q 024338          103 GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVG-------------  169 (269)
Q Consensus       103 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~-------------  169 (269)
                       ++|+|||+|+......   ...++.++.+++|+.++..+++++..    .+.+++|++||...+-.             
T Consensus        61 -~~d~Vih~A~~~~~~~---~~~~~~~~~~~~nv~gt~~ll~a~~~----~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~  132 (319)
T 4b8w_A           61 -QPTHVIHLAAMVGGLF---RNIKYNLDFWRKNVHMNDNVLHSAFE----VGARKVVSCLSTCIFPDKTTYPIDETMIHN  132 (319)
T ss_dssp             -CCSEEEECCCCCCCHH---HHTTCHHHHHHHHHHHHHHHHHHHHH----TTCSEEEEECCGGGSCSSCCSSBCGGGGGB
T ss_pred             -CCCEEEECceeccccc---ccccCHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEEcchhhcCCCCCCCcccccccc
Confidence             6999999999743211   11234567899999998888887743    45679999999865421             


Q ss_pred             ---CCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc------ChHHHHH----HHhcCCC-----
Q 024338          170 ---NIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL------GEDLEKK----ILEKIPL-----  231 (269)
Q Consensus       170 ---~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~------~~~~~~~----~~~~~~~-----  231 (269)
                         .|....|+.+|.+.+.+++.++.+.   |++++.+.|+.+.+|.....      .+.+...    ...+.+.     
T Consensus       133 ~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (319)
T 4b8w_A          133 GPPHNSNFGYSYAKRMIDVQNRAYFQQY---GCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGT  209 (319)
T ss_dssp             SCCCSSSHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESC
T ss_pred             CCCCCCcchHHHHHHHHHHHHHHHHHhh---CCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCC
Confidence               1223369999999999999888765   79999999999998864321      1223333    3333222     


Q ss_pred             ----CCCCCHHHHHHHHHHhccCCCCCCccccEEEecCC
Q 024338          232 ----GRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGG  266 (269)
Q Consensus       232 ----~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg  266 (269)
                          ..+.+++|+|++++.++..+..  ..|+++++.+|
T Consensus       210 g~~~~~~i~v~Dva~a~~~~~~~~~~--~~~~~~ni~~~  246 (319)
T 4b8w_A          210 GNPRRQFIYSLDLAQLFIWVLREYNE--VEPIILSVGEE  246 (319)
T ss_dssp             SCCEECEEEHHHHHHHHHHHHHHCCC--SSCEEECCCGG
T ss_pred             CCeeEEEEeHHHHHHHHHHHHhcccc--CCceEEEecCC
Confidence                1235799999999999865332  35678877654

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.82  E-value=6.8e-20  Score=167.45  Aligned_cols=213  Identities=13%  Similarity=0.104  Sum_probs=151.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHH---HHHHHHHHHHH---------cCCcEEEEEccCCCHHHHHH
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSK---EAEEVCKEIEA---------SGGQALTFGGDVSKEADVES   93 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~---~~~~~~~~l~~---------~~~~~~~~~~Dls~~~~~~~   93 (269)
                      .++||||||+|+||.+++++|.++|++|+++ .|+..   ...++.+.++.         ...++.++.+|+++.+++. 
T Consensus       150 ~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l-~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-  227 (508)
T 4f6l_B          150 LGNTLLTGATGFLGAYLIEALQGYSHRIYCF-IRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-  227 (508)
T ss_dssp             CEEEEESCTTSHHHHHHHHHTBTTEEEEEEE-EESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-
T ss_pred             CCeEEEECCccchHHHHHHHHHhcCCEEEEE-ECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-
Confidence            4799999999999999999999999999986 45443   23333333322         2568999999999977766 


Q ss_pred             HHHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcc--cc---
Q 024338           94 MIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVG--LV---  168 (269)
Q Consensus        94 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~--~~---  168 (269)
                             ...++|+|||||+....       ...++..+++|+.++..+++++.+     ..+++|++||...  ..   
T Consensus       228 -------~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~-----~~~~~v~iSS~~vG~~~~~~  288 (508)
T 4f6l_B          228 -------LPENMDTIIHAGARTDH-------FGDDDEFEKVNVQGTVDVIRLAQQ-----HHARLIYVSTISVGTYFDID  288 (508)
T ss_dssp             -------CSSCCSEEEECCCC---------------CCHHHHHHHHHHHHHHHHT-----TTCEEEEEEESCTTSEECTT
T ss_pred             -------CccCCCEEEECCceecC-------CCCHHHHhhhHHHHHHHHHHHHHh-----CCCcEEEeCChhhccCCccC
Confidence                   34589999999997532       235678899999999988887754     4579999999876  10   


Q ss_pred             -------------CCCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc---------ChHHHHHHH
Q 024338          169 -------------GNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL---------GEDLEKKIL  226 (269)
Q Consensus       169 -------------~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~---------~~~~~~~~~  226 (269)
                                   +..+...|+.+|.+.+.+++.++.    .|++++.+.||.+.++.....         ...+.....
T Consensus       289 ~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~  364 (508)
T 4f6l_B          289 TEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLL  364 (508)
T ss_dssp             CSCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHH----TTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHT
T ss_pred             CcCcccccccccccccCCCcHHHHHHHHHHHHHHHHH----cCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHH
Confidence                         012457899999999988887643    589999999999998864432         112222221


Q ss_pred             hcC--CC------CCCCCHHHHHHHHHHhccCCCCCCccccEEEecCCc
Q 024338          227 EKI--PL------GRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM  267 (269)
Q Consensus       227 ~~~--~~------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg~  267 (269)
                      ...  +.      ..+.+++|+|+++++++..+.    .|+++++.++.
T Consensus       365 ~~~~~~~~~g~~~~~~v~v~DvA~ai~~~~~~~~----~~~~~nl~~~~  409 (508)
T 4f6l_B          365 QLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT----PQIIYHVLSPN  409 (508)
T ss_dssp             TCSEEETTGGGSEEECEEHHHHHHHHHHHTTBCC----SCSEEEESCSC
T ss_pred             HcCCCCCCccCceEEEEcHHHHHHHHHHHHhCCC----CCCEEEeCCCC
Confidence            111  11      124568999999999996543    68999988764

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.82  E-value=3.2e-20  Score=158.00  Aligned_cols=199  Identities=16%  Similarity=0.124  Sum_probs=145.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCccE
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDI  107 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~  107 (269)
                      ++|||||+|+||.+++++|+ +|++|+++ .|+..                 .+.+|++|.+++.++++..     ++|+
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~-~r~~~-----------------~~~~D~~d~~~~~~~~~~~-----~~d~   57 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIAL-DVHSK-----------------EFCGDFSNPKGVAETVRKL-----RPDV   57 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEE-CTTCS-----------------SSCCCTTCHHHHHHHHHHH-----CCSE
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEe-ccccc-----------------cccccCCCHHHHHHHHHhc-----CCCE
Confidence            69999999999999999999 89999885 55541                 3678999999998888754     6999


Q ss_pred             EEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCC-----------CCChhh
Q 024338          108 LINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGN-----------IGQANY  176 (269)
Q Consensus       108 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~-----------~~~~~Y  176 (269)
                      |||+||.....    ...++.++.+++|+.++..+++++.+    .+ .++|++||...+.+.           .+...|
T Consensus        58 vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~----~~-~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y  128 (299)
T 1n2s_A           58 IVNAAAHTAVD----KAESEPELAQLLNATSVEAIAKAANE----TG-AWVVHYSTDYVFPGTGDIPWQETDATSPLNVY  128 (299)
T ss_dssp             EEECCCCCCHH----HHTTCHHHHHHHHTHHHHHHHHHHTT----TT-CEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHH
T ss_pred             EEECcccCCHh----hhhcCHHHHHHHHHHHHHHHHHHHHH----cC-CcEEEEecccEEeCCCCCCCCCCCCCCCccHH
Confidence            99999965321    11235678899999999888887743    23 489999998654332           235689


Q ss_pred             HHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCC-------CCCCCHHHHHHHHHHhcc
Q 024338          177 SAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPL-------GRYGQPEEVAGLVEFLAL  249 (269)
Q Consensus       177 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~a~~~~~l~~  249 (269)
                      +.+|.+.+.+++.++.       +++.++|+.+.++......+.+......+.+.       ..+.+++|+|++++.++.
T Consensus       129 ~~sK~~~E~~~~~~~~-------~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~  201 (299)
T 1n2s_A          129 GKTKLAGEKALQDNCP-------KHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIR  201 (299)
T ss_dssp             HHHHHHHHHHHHHHCS-------SEEEEEECSEECSSSCCHHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCC-------CeEEEeeeeecCCCcCcHHHHHHHHHhcCCCEEeecCcccCCeeHHHHHHHHHHHHH
Confidence            9999999988876542       78999999999886443333333333333222       234469999999999985


Q ss_pred             CCCCCCc-cccEEEecCCc
Q 024338          250 NPAAGYI-TGQVLTIDGGM  267 (269)
Q Consensus       250 ~~~~~~~-~G~~i~~dgg~  267 (269)
                      .+.. .. .|+++++.+|.
T Consensus       202 ~~~~-~~~~~~~~~i~~~~  219 (299)
T 1n2s_A          202 VALN-KPEVAGLYHLVAGG  219 (299)
T ss_dssp             HHHH-CGGGCEEEECCCBS
T ss_pred             Hhcc-ccccCceEEEeCCC
Confidence            4310 12 47889888763

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.80  E-value=3.2e-19  Score=150.72  Aligned_cols=192  Identities=14%  Similarity=0.082  Sum_probs=132.8

Q ss_pred             EEEEeCCCCchHHHHHHHHHHc--CCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Q 024338           28 VAVVTGASRGIGRAVATSLGKA--GCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTV  105 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~--G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i  105 (269)
                      ++|||||+|+||.+++++|+++  |++|+++ .|+++..+.+.    .  ..+.++.+|++|.+++.++++       ++
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~-~r~~~~~~~~~----~--~~~~~~~~D~~d~~~~~~~~~-------~~   66 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAI-VRNPAKAQALA----A--QGITVRQADYGDEAALTSALQ-------GV   66 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEE-ESCTTTCHHHH----H--TTCEEEECCTTCHHHHHHHTT-------TC
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEE-EcChHhhhhhh----c--CCCeEEEcCCCCHHHHHHHHh-------CC
Confidence            3899999999999999999998  9999985 56655443322    1  356788999999988887765       68


Q ss_pred             cEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHHHH
Q 024338          106 DILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIG  185 (269)
Q Consensus       106 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~  185 (269)
                      |+|||+|+...                ..|+.++..+++++    .+.+.+++|++||....   +....|+.+|.+.+.
T Consensus        67 d~vi~~a~~~~----------------~~~~~~~~~l~~a~----~~~~~~~~v~~Ss~~~~---~~~~~y~~sK~~~e~  123 (286)
T 2zcu_A           67 EKLLLISSSEV----------------GQRAPQHRNVINAA----KAAGVKFIAYTSLLHAD---TSPLGLADEHIETEK  123 (286)
T ss_dssp             SEEEECC------------------------CHHHHHHHHH----HHHTCCEEEEEEETTTT---TCCSTTHHHHHHHHH
T ss_pred             CEEEEeCCCCc----------------hHHHHHHHHHHHHH----HHcCCCEEEEECCCCCC---CCcchhHHHHHHHHH
Confidence            99999998521                12556655555544    44456799999998775   233589999999988


Q ss_pred             HHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHh----cCCCCCCCCHHHHHHHHHHhccCCCCCCccccEE
Q 024338          186 LTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILE----KIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL  261 (269)
Q Consensus       186 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i  261 (269)
                      +++.       .|++++.++||++.++..... .........    ......+.+++|+|++++.++..+.   .+|+++
T Consensus       124 ~~~~-------~~~~~~ilrp~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~---~~g~~~  192 (286)
T 2zcu_A          124 MLAD-------SGIVYTLLRNGWYSENYLASA-PAALEHGVFIGAAGDGKIASATRADYAAAAARVISEAG---HEGKVY  192 (286)
T ss_dssp             HHHH-------HCSEEEEEEECCBHHHHHTTH-HHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHHSSS---CTTCEE
T ss_pred             HHHH-------cCCCeEEEeChHHhhhhHHHh-HHhhcCCceeccCCCCccccccHHHHHHHHHHHhcCCC---CCCceE
Confidence            8753       389999999998776542111 111110000    0122346689999999999986532   378999


Q ss_pred             EecCCc
Q 024338          262 TIDGGM  267 (269)
Q Consensus       262 ~~dgg~  267 (269)
                      +++++.
T Consensus       193 ~i~~~~  198 (286)
T 2zcu_A          193 ELAGDS  198 (286)
T ss_dssp             EECCSS
T ss_pred             EEeCCC
Confidence            998873

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.79  E-value=4.2e-20  Score=158.53  Aligned_cols=208  Identities=17%  Similarity=0.091  Sum_probs=140.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHH----HHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHH
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSK----EAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTA   98 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~----~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~   98 (269)
                      ++.++++|||||+|+||.+++++|+++|++|+++ .|+..    ....+.. + ....++.++.+|++            
T Consensus         4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~-~-~~~~~~~~~~~Dl~------------   68 (321)
T 3vps_A            4 NTLKHRILITGGAGFIGGHLARALVASGEEVTVL-DDLRVPPMIPPEGTGK-F-LEKPVLELEERDLS------------   68 (321)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCCEEEE-CCCSSCCSSCCTTSSE-E-ECSCGGGCCHHHHT------------
T ss_pred             ccCCCeEEEECCCChHHHHHHHHHHHCCCEEEEE-ecCCcccccchhhhhh-h-ccCCCeeEEeCccc------------
Confidence            4567999999999999999999999999999985 55443    1111100 0 00122334455554            


Q ss_pred             HHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCC--------
Q 024338           99 VDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGN--------  170 (269)
Q Consensus        99 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~--------  170 (269)
                           ++|+|||+|+.........    .....++ |+.++..+++++..    .+.+++|++||...+...        
T Consensus        69 -----~~d~vi~~a~~~~~~~~~~----~~~~~~~-n~~~~~~ll~a~~~----~~v~~~v~~SS~~v~~~~~~~~~~E~  134 (321)
T 3vps_A           69 -----DVRLVYHLASHKSVPRSFK----QPLDYLD-NVDSGRHLLALCTS----VGVPKVVVGSTCEVYGQADTLPTPED  134 (321)
T ss_dssp             -----TEEEEEECCCCCCHHHHTT----STTTTHH-HHHHHHHHHHHHHH----HTCCEEEEEEEGGGGCSCSSSSBCTT
T ss_pred             -----cCCEEEECCccCChHHHHh----CHHHHHH-HHHHHHHHHHHHHH----cCCCeEEEecCHHHhCCCCCCCCCCC
Confidence                 7999999999764311111    1233455 99998888887754    345799999998654322        


Q ss_pred             ---CCChhhHHhHHHHHHHHHHHHHHhccCCe-EEEEEecCCccCCcccc--cChHHHHHHHhcCCC---------CCCC
Q 024338          171 ---IGQANYSAAKAGVIGLTKTVAKEYASRNI-NVNAIAPGFIASDMTAK--LGEDLEKKILEKIPL---------GRYG  235 (269)
Q Consensus       171 ---~~~~~Y~~sK~al~~~~~~la~e~~~~gi-~v~~v~pG~v~t~~~~~--~~~~~~~~~~~~~~~---------~~~~  235 (269)
                         .+...|+.+|.+.+.+++.++.+   .|+ +++.+.|+.+.+|....  ..+.+......+.+.         ..+.
T Consensus       135 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  211 (321)
T 3vps_A          135 SPLSPRSPYAASKVGLEMVAGAHQRA---SVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFT  211 (321)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHS---SSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEECEE
T ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHH---cCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCceEceE
Confidence               23578999999999999888765   488 99999999999886443  123333333333211         1345


Q ss_pred             CHHHHHHHHHHhccCCCCCCccccEEEecCCc
Q 024338          236 QPEEVAGLVEFLALNPAAGYITGQVLTIDGGM  267 (269)
Q Consensus       236 ~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg~  267 (269)
                      +++|+|++++.++..+.    .| ++++.+|.
T Consensus       212 ~v~Dva~~~~~~~~~~~----~g-~~~i~~~~  238 (321)
T 3vps_A          212 YITDVVDKLVALANRPL----PS-VVNFGSGQ  238 (321)
T ss_dssp             EHHHHHHHHHHGGGSCC----CS-EEEESCSC
T ss_pred             EHHHHHHHHHHHHhcCC----CC-eEEecCCC
Confidence            79999999999996543    27 89998764

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.77  E-value=2.5e-19  Score=151.67  Aligned_cols=198  Identities=11%  Similarity=0.065  Sum_probs=140.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      +++++|||| +|+||.++++.|+++|++|+++ .|+.+..          ..++.++.+|++|.+++.++++      ++
T Consensus         2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~-~r~~~~~----------~~~~~~~~~Dl~d~~~~~~~~~------~~   63 (286)
T 3gpi_A            2 SLSKILIAG-CGDLGLELARRLTAQGHEVTGL-RRSAQPM----------PAGVQTLIADVTRPDTLASIVH------LR   63 (286)
T ss_dssp             CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEE-ECTTSCC----------CTTCCEEECCTTCGGGCTTGGG------GC
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEE-eCCcccc----------ccCCceEEccCCChHHHHHhhc------CC
Confidence            457899999 5999999999999999999986 5654331          3567789999999998877665      36


Q ss_pred             ccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccC-----------CCCC
Q 024338          105 VDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVG-----------NIGQ  173 (269)
Q Consensus       105 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~-----------~~~~  173 (269)
                      +|+|||+|+..         ..+.+..+++|+.++..+++++.    +.+.+++|++||...+-.           ..+.
T Consensus        64 ~d~vih~a~~~---------~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~  130 (286)
T 3gpi_A           64 PEILVYCVAAS---------EYSDEHYRLSYVEGLRNTLSALE----GAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAK  130 (286)
T ss_dssp             CSEEEECHHHH---------HHC-----CCSHHHHHHHHHHTT----TSCCCEEEEEEEGGGCCCCCSSEECTTSCCCCC
T ss_pred             CCEEEEeCCCC---------CCCHHHHHHHHHHHHHHHHHHHh----hCCCCEEEEEcccEEEcCCCCCCCCCCCCCCCC
Confidence            99999999852         23456788899999777777664    455679999999865432           2245


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhc------CCCCCCCCHHHHHHHHHHh
Q 024338          174 ANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEK------IPLGRYGQPEEVAGLVEFL  247 (269)
Q Consensus       174 ~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~a~~~~~l  247 (269)
                      ..|+.+|.+.+.+ +..        ++++.+.|+.+.++....    +...+...      .....+.+++|+|++++.+
T Consensus       131 ~~Y~~sK~~~E~~-~~~--------~~~~ilR~~~v~G~~~~~----~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  197 (286)
T 3gpi_A          131 DFSGKRMLEAEAL-LAA--------YSSTILRFSGIYGPGRLR----MIRQAQTPEQWPARNAWTNRIHRDDGAAFIAYL  197 (286)
T ss_dssp             SHHHHHHHHHHHH-GGG--------SSEEEEEECEEEBTTBCH----HHHHTTCGGGSCSSBCEECEEEHHHHHHHHHHH
T ss_pred             ChhhHHHHHHHHH-Hhc--------CCeEEEecccccCCCchh----HHHHHHhcccCCCcCceeEEEEHHHHHHHHHHH
Confidence            6899999988877 432        789999999998875432    21211110      1112345799999999999


Q ss_pred             ccCCCCCCccccEEEecCCc
Q 024338          248 ALNPAAGYITGQVLTIDGGM  267 (269)
Q Consensus       248 ~~~~~~~~~~G~~i~~dgg~  267 (269)
                      +..+. ....|+++++.+|.
T Consensus       198 ~~~~~-~~~~~~~~~~~~~~  216 (286)
T 3gpi_A          198 IQQRS-HAVPERLYIVTDNQ  216 (286)
T ss_dssp             HHHHT-TSCCCSEEEECCSC
T ss_pred             Hhhhc-cCCCCceEEEeCCC
Confidence            96532 12458899988764

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.76  E-value=1.7e-18  Score=147.46  Aligned_cols=204  Identities=15%  Similarity=0.089  Sum_probs=135.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcC-CcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAG-CKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G-~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      +|++|||||+|+||.+++++|+++| ++|+++ .|+++...  .+.+..  ..+.++.+|++|.+++.++++       +
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~-~R~~~~~~--~~~l~~--~~~~~~~~D~~d~~~l~~~~~-------~   72 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVV-TRNPRKKA--AKELRL--QGAEVVQGDQDDQVIMELALN-------G   72 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEE-ESCTTSHH--HHHHHH--TTCEEEECCTTCHHHHHHHHT-------T
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEE-EcCCCCHH--HHHHHH--CCCEEEEecCCCHHHHHHHHh-------c
Confidence            5899999999999999999999999 898885 56654321  122222  356788999999998888776       6


Q ss_pred             ccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcccc--CCCCChhhHHhHHH
Q 024338          105 VDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLV--GNIGQANYSAAKAG  182 (269)
Q Consensus       105 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~--~~~~~~~Y~~sK~a  182 (269)
                      +|+|||+++.....            ..+.|+.+    .+.+++.+.+.+.+++|++|+.....  ..+....|+.+|.+
T Consensus        73 ~d~vi~~a~~~~~~------------~~~~~~~~----~~~~~~aa~~~gv~~iv~~S~~~~~~~~~~~~~~~y~~sK~~  136 (299)
T 2wm3_A           73 AYATFIVTNYWESC------------SQEQEVKQ----GKLLADLARRLGLHYVVYSGLENIKKLTAGRLAAAHFDGKGE  136 (299)
T ss_dssp             CSEEEECCCHHHHT------------CHHHHHHH----HHHHHHHHHHHTCSEEEECCCCCHHHHTTTSCCCHHHHHHHH
T ss_pred             CCEEEEeCCCCccc------------cchHHHHH----HHHHHHHHHHcCCCEEEEEcCccccccCCCcccCchhhHHHH
Confidence            89999999742110            12344444    44455555555678999966543221  11234679999999


Q ss_pred             HHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHH---HhcCCCC----CCCCHHHHHHHHHHhccCCCCCC
Q 024338          183 VIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKI---LEKIPLG----RYGQPEEVAGLVEFLALNPAAGY  255 (269)
Q Consensus       183 l~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~---~~~~~~~----~~~~~~~~a~~~~~l~~~~~~~~  255 (269)
                      ++.+.+.       .|++++.++||++.+++.....+.....-   .-..+.+    .+.+++|+|+++..++..+.  .
T Consensus       137 ~e~~~~~-------~gi~~~ilrp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~--~  207 (299)
T 2wm3_A          137 VEEYFRD-------IGVPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPE--K  207 (299)
T ss_dssp             HHHHHHH-------HTCCEEEEECCEEGGGGGTTTCCEECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHH--H
T ss_pred             HHHHHHH-------CCCCEEEEeecHHhhhchhhcCCcccCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcChh--h
Confidence            9888764       38999999999998875432111000000   0011211    24479999999999986432  1


Q ss_pred             ccccEEEecCC
Q 024338          256 ITGQVLTIDGG  266 (269)
Q Consensus       256 ~~G~~i~~dgg  266 (269)
                      ..|+++.+.|.
T Consensus       208 ~~g~~~~~~g~  218 (299)
T 2wm3_A          208 YVGQNIGLSTC  218 (299)
T ss_dssp             HTTCEEECCSE
T ss_pred             hCCeEEEeeec
Confidence            36888888753

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.75  E-value=1.3e-17  Score=141.30  Aligned_cols=192  Identities=14%  Similarity=0.105  Sum_probs=128.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHHc-CCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCcc
Q 024338           28 VAVVTGASRGIGRAVATSLGKA-GCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVD  106 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~-G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id  106 (269)
                      ++|||||+|+||.++++.|+++ |++|+++ .|+++...++      ....+.++.+|++|.+++.++++       ++|
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~-~R~~~~~~~~------~~~~v~~~~~D~~d~~~l~~~~~-------~~d   67 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIG-VRNVEKVPDD------WRGKVSVRQLDYFNQESMVEAFK-------GMD   67 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEE-ESSGGGSCGG------GBTTBEEEECCTTCHHHHHHHTT-------TCS
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEE-ECCHHHHHHh------hhCCCEEEEcCCCCHHHHHHHHh-------CCC
Confidence            4999999999999999999998 9999985 6776543322      13468889999999998888775       789


Q ss_pred             EEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHHHHH
Q 024338          107 ILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGL  186 (269)
Q Consensus       107 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~~  186 (269)
                      +|||+|+.....              ..|+.+.    +.+++.+++.+.+++|++||.......+    |..++...   
T Consensus        68 ~vi~~a~~~~~~--------------~~~~~~~----~~l~~aa~~~gv~~iv~~Ss~~~~~~~~----~~~~~~~~---  122 (289)
T 3e48_A           68 TVVFIPSIIHPS--------------FKRIPEV----ENLVYAAKQSGVAHIIFIGYYADQHNNP----FHMSPYFG---  122 (289)
T ss_dssp             EEEECCCCCCSH--------------HHHHHHH----HHHHHHHHHTTCCEEEEEEESCCSTTCC----STTHHHHH---
T ss_pred             EEEEeCCCCccc--------------hhhHHHH----HHHHHHHHHcCCCEEEEEcccCCCCCCC----CccchhHH---
Confidence            999999864321              1245553    4555555566778999999965433322    22222211   


Q ss_pred             HHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCC----CCCHHHHHHHHHHhccCCCCCCccccEEE
Q 024338          187 TKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGR----YGQPEEVAGLVEFLALNPAAGYITGQVLT  262 (269)
Q Consensus       187 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~a~~~~~l~~~~~~~~~~G~~i~  262 (269)
                        .+...+...|++++.++||++.+++.... ...........+.+.    +.+++|+|++++.++..+..   .|++++
T Consensus       123 --~~e~~~~~~g~~~~ilrp~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~---~g~~~~  196 (289)
T 3e48_A          123 --YASRLLSTSGIDYTYVRMAMYMDPLKPYL-PELMNMHKLIYPAGDGRINYITRNDIARGVIAIIKNPDT---WGKRYL  196 (289)
T ss_dssp             --HHHHHHHHHCCEEEEEEECEESTTHHHHH-HHHHHHTEECCCCTTCEEEEECHHHHHHHHHHHHHCGGG---TTCEEE
T ss_pred             --HHHHHHHHcCCCEEEEeccccccccHHHH-HHHHHCCCEecCCCCceeeeEEHHHHHHHHHHHHcCCCc---CCceEE
Confidence              22233345589999999999988854211 111111111122222    55899999999999966432   288999


Q ss_pred             ec
Q 024338          263 ID  264 (269)
Q Consensus       263 ~d  264 (269)
                      +.
T Consensus       197 ~~  198 (289)
T 3e48_A          197 LS  198 (289)
T ss_dssp             EC
T ss_pred             eC
Confidence            88

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.74  E-value=6.5e-18  Score=147.40  Aligned_cols=204  Identities=13%  Similarity=0.106  Sum_probs=135.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEcc-CCCHHHHHHHHHHHHHhc
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGD-VSKEADVESMIKTAVDAW  102 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~D-ls~~~~~~~~~~~~~~~~  102 (269)
                      +.+|++|||||+|+||.++++.|+++|++|+++ .|+.+...  .+.+.. ...+.++.+| ++|.+++.++++      
T Consensus         3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~-~R~~~~~~--~~~l~~-~~~v~~v~~D~l~d~~~l~~~~~------   72 (352)
T 1xgk_A            3 QQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQ-VHSLKGLI--AEELQA-IPNVTLFQGPLLNNVPLMDTLFE------   72 (352)
T ss_dssp             CCCCCEEEESTTSHHHHHHHHHHHHTTCCEEEE-ESCSCSHH--HHHHHT-STTEEEEESCCTTCHHHHHHHHT------
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEE-ECCCChhh--HHHHhh-cCCcEEEECCccCCHHHHHHHHh------
Confidence            346889999999999999999999999999885 55544331  122322 2368889999 999999888775      


Q ss_pred             CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCeEEEEcCCc-cccCCCCChhhHHhH
Q 024338          103 GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK-KGRIINIASVV-GLVGNIGQANYSAAK  180 (269)
Q Consensus       103 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~-~~~~~~~~~~Y~~sK  180 (269)
                       .+|+||||++....               +.|..+     +.+++.+.+.+ .+++|++||.. +..+.+....|+.+|
T Consensus        73 -~~d~Vi~~a~~~~~---------------~~~~~~-----~~l~~aa~~~g~v~~~V~~SS~~~~~~~~~~~~~y~~sK  131 (352)
T 1xgk_A           73 -GAHLAFINTTSQAG---------------DEIAIG-----KDLADAAKRAGTIQHYIYSSMPDHSLYGPWPAVPMWAPK  131 (352)
T ss_dssp             -TCSEEEECCCSTTS---------------CHHHHH-----HHHHHHHHHHSCCSEEEEEECCCGGGTSSCCCCTTTHHH
T ss_pred             -cCCEEEEcCCCCCc---------------HHHHHH-----HHHHHHHHHcCCccEEEEeCCccccccCCCCCccHHHHH
Confidence             68999999874311               124433     34444444455 68999999987 344445567899999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHH-HHhcC-----C-----CCCCCCH-HHHHHHHHHhc
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKK-ILEKI-----P-----LGRYGQP-EEVAGLVEFLA  248 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~-~~~~~-----~-----~~~~~~~-~~~a~~~~~l~  248 (269)
                      .+.+.+++.+       |++++.++||++.........+.+... ...+.     +     ...+.++ +|+|++++.++
T Consensus       132 ~~~E~~~~~~-------gi~~~ivrpg~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l  204 (352)
T 1xgk_A          132 FTVENYVRQL-------GLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIF  204 (352)
T ss_dssp             HHHHHHHHTS-------SSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHc-------CCCEEEEecceecCCchhcccccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHH
Confidence            9999887652       899999999976543321100000000 00000     1     1123467 89999999998


Q ss_pred             cCCCCCCccccEEEecCC
Q 024338          249 LNPAAGYITGQVLTIDGG  266 (269)
Q Consensus       249 ~~~~~~~~~G~~i~~dgg  266 (269)
                      ..+. ....|+++.+.++
T Consensus       205 ~~~~-~~~~g~~~~l~~~  221 (352)
T 1xgk_A          205 KDGP-QKWNGHRIALTFE  221 (352)
T ss_dssp             HHCH-HHHTTCEEEECSE
T ss_pred             hCCc-hhhCCeEEEEecC
Confidence            5431 1246888888764

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.72  E-value=3.8e-17  Score=138.08  Aligned_cols=190  Identities=11%  Similarity=0.027  Sum_probs=131.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCcc
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVD  106 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id  106 (269)
                      +++||||| |.||.+++++|+++|++|+++ .|+++....+..      ..+.++.+|++|.+            +.++|
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~------~~~~~~~~D~~d~~------------~~~~d   65 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGT-SRNPDQMEAIRA------SGAEPLLWPGEEPS------------LDGVT   65 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEE-ESCGGGHHHHHH------TTEEEEESSSSCCC------------CTTCC
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEE-EcChhhhhhHhh------CCCeEEEecccccc------------cCCCC
Confidence            68999998 999999999999999999985 677665544332      46889999999832            45899


Q ss_pred             EEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--CCCCeEEEEcCCccccC-----------CCCC
Q 024338          107 ILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMK--KKKGRIINIASVVGLVG-----------NIGQ  173 (269)
Q Consensus       107 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~--~~~~~iv~isS~~~~~~-----------~~~~  173 (269)
                      +|||+|+.....     .  .              ..+.++..+.+  .+.+++|++||...+-.           ..+.
T Consensus        66 ~vi~~a~~~~~~-----~--~--------------~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~  124 (286)
T 3ius_A           66 HLLISTAPDSGG-----D--P--------------VLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPT  124 (286)
T ss_dssp             EEEECCCCBTTB-----C--H--------------HHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCC
T ss_pred             EEEECCCccccc-----c--H--------------HHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCCC
Confidence            999999965432     0  1              02334444444  45679999999754422           1234


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHH---HHhcCCCCCCCCHHHHHHHHHHhccC
Q 024338          174 ANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKK---ILEKIPLGRYGQPEEVAGLVEFLALN  250 (269)
Q Consensus       174 ~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~a~~~~~l~~~  250 (269)
                      ..|+.+|.+.+.+++.+      .|++++.++|+.+.++.......-....   ....-....+.+++|+|++++.++..
T Consensus       125 ~~Y~~sK~~~E~~~~~~------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~  198 (286)
T 3ius_A          125 AARGRWRVMAEQQWQAV------PNLPLHVFRLAGIYGPGRGPFSKLGKGGIRRIIKPGQVFSRIHVEDIAQVLAASMAR  198 (286)
T ss_dssp             SHHHHHHHHHHHHHHHS------TTCCEEEEEECEEEBTTBSSSTTSSSSCCCEEECTTCCBCEEEHHHHHHHHHHHHHS
T ss_pred             CHHHHHHHHHHHHHHhh------cCCCEEEEeccceECCCchHHHHHhcCCccccCCCCcccceEEHHHHHHHHHHHHhC
Confidence            57999999988887766      5899999999999887533221100000   00000122345789999999999965


Q ss_pred             CCCCCccccEEEecCCc
Q 024338          251 PAAGYITGQVLTIDGGM  267 (269)
Q Consensus       251 ~~~~~~~G~~i~~dgg~  267 (269)
                      +.    .|+++++.+|.
T Consensus       199 ~~----~g~~~~i~~~~  211 (286)
T 3ius_A          199 PD----PGAVYNVCDDE  211 (286)
T ss_dssp             CC----TTCEEEECCSC
T ss_pred             CC----CCCEEEEeCCC
Confidence            43    58899988764

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.72  E-value=5e-17  Score=138.68  Aligned_cols=193  Identities=17%  Similarity=0.182  Sum_probs=126.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCH-------HHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHH
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSS-------KEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTA   98 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~-------~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~   98 (269)
                      +++++||||+|+||.+++++|+++|++|+++ .|+.       ++.+.+ +++..  ..+.++.+|++|.+++.++++  
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~-~R~~~~~~~~~~~~~~~-~~l~~--~~v~~v~~D~~d~~~l~~~~~--   75 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYAL-VRKTITAANPETKEELI-DNYQS--LGVILLEGDINDHETLVKAIK--   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEE-ECCSCCSSCHHHHHHHH-HHHHH--TTCEEEECCTTCHHHHHHHHT--
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEE-ECCCcccCChHHHHHHH-HHHHh--CCCEEEEeCCCCHHHHHHHHh--
Confidence            4679999999999999999999999999885 5554       444332 33332  347789999999998888776  


Q ss_pred             HHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCeEEEEcCCcccc------CCC
Q 024338           99 VDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK-KGRIINIASVVGLV------GNI  171 (269)
Q Consensus        99 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~------~~~  171 (269)
                           ++|+|||+++...                   +.+...++++    +++.+ .+++|.  |..+..      ..|
T Consensus        76 -----~~d~vi~~a~~~~-------------------~~~~~~l~~a----a~~~g~v~~~v~--S~~g~~~~~~~~~~p  125 (307)
T 2gas_A           76 -----QVDIVICAAGRLL-------------------IEDQVKIIKA----IKEAGNVKKFFP--SEFGLDVDRHDAVEP  125 (307)
T ss_dssp             -----TCSEEEECSSSSC-------------------GGGHHHHHHH----HHHHCCCSEEEC--SCCSSCTTSCCCCTT
T ss_pred             -----CCCEEEECCcccc-------------------cccHHHHHHH----HHhcCCceEEee--cccccCcccccCCCc
Confidence                 6999999998642                   2233333443    33444 678873  443421      123


Q ss_pred             CChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHH---HH--H---HHhcCCCCCCCCHHHHHHH
Q 024338          172 GQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDL---EK--K---ILEKIPLGRYGQPEEVAGL  243 (269)
Q Consensus       172 ~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~---~~--~---~~~~~~~~~~~~~~~~a~~  243 (269)
                      ....| .+|.+++.+.+.       .|++++.++||++.+++........   ..  .   .........+.+++|+|++
T Consensus       126 ~~~~y-~sK~~~e~~~~~-------~~i~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  197 (307)
T 2gas_A          126 VRQVF-EEKASIRRVIEA-------EGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTF  197 (307)
T ss_dssp             HHHHH-HHHHHHHHHHHH-------HTCCBEEEECCEETTTTGGGTTCTTCSSCCSSEEEEETTSCSEEEEECHHHHHHH
T ss_pred             chhHH-HHHHHHHHHHHH-------cCCCeEEEEcceeeccccccccccccccCCCCeEEEecCCCcceEEeeHHHHHHH
Confidence            34579 999988877652       3799999999999886543221100   00  0   0000111234589999999


Q ss_pred             HHHhccCCCCCCccccEEEecC
Q 024338          244 VEFLALNPAAGYITGQVLTIDG  265 (269)
Q Consensus       244 ~~~l~~~~~~~~~~G~~i~~dg  265 (269)
                      ++.++..+.   ..|+.+.+.|
T Consensus       198 ~~~~l~~~~---~~~~~~~~~~  216 (307)
T 2gas_A          198 TIRAANDPN---TLNKAVHIRL  216 (307)
T ss_dssp             HHHHHTCGG---GTTEEEECCC
T ss_pred             HHHHHcCcc---ccCceEEEeC
Confidence            999996542   2367777654

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.71  E-value=7.3e-17  Score=141.42  Aligned_cols=185  Identities=17%  Similarity=0.151  Sum_probs=137.8

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC-cEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCcc
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGC-KVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVD  106 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~-~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id  106 (269)
                      ++|||||+|+||++++++|+++|+ +|+. .+|+                         +|.++++++++       ++|
T Consensus         2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~-~d~~-------------------------~d~~~l~~~~~-------~~d   48 (369)
T 3st7_A            2 NIVITGAKGFVGKNLKADLTSTTDHHIFE-VHRQ-------------------------TKEEELESALL-------KAD   48 (369)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEE-CCTT-------------------------CCHHHHHHHHH-------HCS
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEE-ECCC-------------------------CCHHHHHHHhc-------cCC
Confidence            699999999999999999999998 6555 2332                         67788887776       589


Q ss_pred             EEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCC-eEEEEcCCccccCCCCChhhHHhHHHHHH
Q 024338          107 ILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKG-RIINIASVVGLVGNIGQANYSAAKAGVIG  185 (269)
Q Consensus       107 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~-~iv~isS~~~~~~~~~~~~Y~~sK~al~~  185 (269)
                      +|||+||.....        ..+..+++|+.++..+++++.    +.+.. ++|++||.....    ...|+.+|.+.+.
T Consensus        49 ~Vih~a~~~~~~--------~~~~~~~~n~~~~~~l~~a~~----~~~~~~~~v~~Ss~~~~~----~~~Y~~sK~~~E~  112 (369)
T 3st7_A           49 FIVHLAGVNRPE--------HDKEFSLGNVSYLDHVLDILT----RNTKKPAILLSSSIQATQ----DNPYGESKLQGEQ  112 (369)
T ss_dssp             EEEECCCSBCTT--------CSTTCSSSCCBHHHHHHHHHT----TCSSCCEEEEEEEGGGGS----CSHHHHHHHHHHH
T ss_pred             EEEECCcCCCCC--------CHHHHHHHHHHHHHHHHHHHH----HhCCCCeEEEeCchhhcC----CCCchHHHHHHHH
Confidence            999999975432        234467789999777777663    34444 899999987764    6789999999999


Q ss_pred             HHHHHHHHhccCCeEEEEEecCCccCCccccc----ChHHHHHHHhcCCCC--------CCCCHHHHHHHHHHhccCCCC
Q 024338          186 LTKTVAKEYASRNINVNAIAPGFIASDMTAKL----GEDLEKKILEKIPLG--------RYGQPEEVAGLVEFLALNPAA  253 (269)
Q Consensus       186 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~----~~~~~~~~~~~~~~~--------~~~~~~~~a~~~~~l~~~~~~  253 (269)
                      +++.++.+.   |+++..+.|+.+.++.....    .+.+......+.+..        .+.+++|+|++++.++..+..
T Consensus       113 ~~~~~~~~~---g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~  189 (369)
T 3st7_A          113 LLREYAEEY---GNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAIEGTPT  189 (369)
T ss_dssp             HHHHHHHHH---CCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHHHHHHTCCC
T ss_pred             HHHHHHHHh---CCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHHHHHHhCCcc
Confidence            999988765   78999999999988865432    233334444443332        234699999999999966532


Q ss_pred             CCccccEEEecCC
Q 024338          254 GYITGQVLTIDGG  266 (269)
Q Consensus       254 ~~~~G~~i~~dgg  266 (269)
                        ..|+++++.+|
T Consensus       190 --~~~~~~~i~~~  200 (369)
T 3st7_A          190 --IENGVPTVPNV  200 (369)
T ss_dssp             --EETTEECCSCC
T ss_pred             --cCCceEEeCCC
Confidence              23788888776

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.69  E-value=2e-16  Score=137.48  Aligned_cols=198  Identities=16%  Similarity=0.082  Sum_probs=132.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCH----HHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHH
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSS----KEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAV   99 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~----~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~   99 (269)
                      +..+++|||||+|+||.++++.|+++|++|+++ .|+.    +..+ ..+.+..  ..+.++.+|++|.+++.+++++. 
T Consensus         8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l-~R~~~~~~~~~~-~~~~l~~--~~v~~~~~Dl~d~~~l~~~~~~~-   82 (346)
T 3i6i_A            8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYIL-ARPGPRSPSKAK-IFKALED--KGAIIVYGLINEQEAMEKILKEH-   82 (346)
T ss_dssp             ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEE-ECSSCCCHHHHH-HHHHHHH--TTCEEEECCTTCHHHHHHHHHHT-
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEE-ECCCCCChhHHH-HHHHHHh--CCcEEEEeecCCHHHHHHHHhhC-
Confidence            346789999999999999999999999999986 5543    3332 2333332  46788999999999999888753 


Q ss_pred             HhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCeEEEEcCCccc----cCCCCCh
Q 024338          100 DAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK-KGRIINIASVVGL----VGNIGQA  174 (269)
Q Consensus       100 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~----~~~~~~~  174 (269)
                          ++|+|||+++..                   |+.+...+++++..    .+ ..++|+ |+....    .+.++..
T Consensus        83 ----~~d~Vi~~a~~~-------------------n~~~~~~l~~aa~~----~g~v~~~v~-S~~g~~~~e~~~~~p~~  134 (346)
T 3i6i_A           83 ----EIDIVVSTVGGE-------------------SILDQIALVKAMKA----VGTIKRFLP-SEFGHDVNRADPVEPGL  134 (346)
T ss_dssp             ----TCCEEEECCCGG-------------------GGGGHHHHHHHHHH----HCCCSEEEC-SCCSSCTTTCCCCTTHH
T ss_pred             ----CCCEEEECCchh-------------------hHHHHHHHHHHHHH----cCCceEEee-cccCCCCCccCcCCCcc
Confidence                799999999862                   77777777766644    34 567775 443222    1224557


Q ss_pred             hhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHH--H------HHhcCCCCCCCCHHHHHHHHHH
Q 024338          175 NYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEK--K------ILEKIPLGRYGQPEEVAGLVEF  246 (269)
Q Consensus       175 ~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~--~------~~~~~~~~~~~~~~~~a~~~~~  246 (269)
                      .|+.+|.+.+.+.+.       .|++++.++||++.+............  .      .........+.+++|+|++++.
T Consensus       135 ~y~~sK~~~e~~l~~-------~g~~~tivrpg~~~g~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~  207 (346)
T 3i6i_A          135 NMYREKRRVRQLVEE-------SGIPFTYICCNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMK  207 (346)
T ss_dssp             HHHHHHHHHHHHHHH-------TTCCBEEEECCEESSCCCSCC-----CCCCSSCEEEETTSCCCEEEECHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHH-------cCCCEEEEEecccccccCccccccccccCCCceEEEccCCCceEEecCHHHHHHHHHH
Confidence            899999998777654       489999999998887653322111000  0      0000111235589999999999


Q ss_pred             hccCCCCCCccccEEEec
Q 024338          247 LALNPAAGYITGQVLTID  264 (269)
Q Consensus       247 l~~~~~~~~~~G~~i~~d  264 (269)
                      ++..++   ..|+++.+-
T Consensus       208 ~l~~~~---~~~~~~~i~  222 (346)
T 3i6i_A          208 TVDDVR---TLNKSVHFR  222 (346)
T ss_dssp             HTTCGG---GTTEEEECC
T ss_pred             HHhCcc---ccCeEEEEe
Confidence            996543   235666654

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.68  E-value=8.4e-16  Score=134.04  Aligned_cols=209  Identities=17%  Similarity=0.103  Sum_probs=138.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcC-----CcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAG-----CKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G-----~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      +|++|||||+|+||.+++++|+++|     ++|+++ .|+.....       ....++.++.+|++|.+++.++++..  
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~-~r~~~~~~-------~~~~~~~~~~~Dl~d~~~~~~~~~~~--   70 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGV-ARRTRPAW-------HEDNPINYVQCDISDPDDSQAKLSPL--   70 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEE-ESSCCCSC-------CCSSCCEEEECCTTSHHHHHHHHTTC--
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEE-eCCCCccc-------cccCceEEEEeecCCHHHHHHHHhcC--
Confidence            4789999999999999999999999     888885 55433221       11346788999999999888776532  


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEE-------EEcCCccccC----
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRII-------NIASVVGLVG----  169 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv-------~isS~~~~~~----  169 (269)
                        +++|+|||+|+...         ++.++.+++|+.++..+++++.+..  .+..++|       ++||...+-.    
T Consensus        71 --~~~d~vih~a~~~~---------~~~~~~~~~n~~~~~~l~~a~~~~~--~~~~~~v~~~g~~i~~Ss~~vyg~~~~~  137 (364)
T 2v6g_A           71 --TDVTHVFYVTWANR---------STEQENCEANSKMFRNVLDAVIPNC--PNLKHISLQTGRKHYMGPFESYGKIESH  137 (364)
T ss_dssp             --TTCCEEEECCCCCC---------SSHHHHHHHHHHHHHHHHHHHTTTC--TTCCEEEEECCTHHHHCCGGGTTTSCCC
T ss_pred             --CCCCEEEECCCCCc---------chHHHHHHHhHHHHHHHHHHHHHhc--cccceEEeccCceEEEechhhccccccC
Confidence              24999999999652         2457789999999999888876421  1445776       6887653311    


Q ss_pred             ----------CCCChhhHHhHHHHHHHHHHHHHHhccCC-eEEEEEecCCccCCcccccChH-----HHHHH--HhcCCC
Q 024338          170 ----------NIGQANYSAAKAGVIGLTKTVAKEYASRN-INVNAIAPGFIASDMTAKLGED-----LEKKI--LEKIPL  231 (269)
Q Consensus       170 ----------~~~~~~Y~~sK~al~~~~~~la~e~~~~g-i~v~~v~pG~v~t~~~~~~~~~-----~~~~~--~~~~~~  231 (269)
                                .+....|..    .+.+++.++   ...| +++..++|+.+..+........     ....+  ..+.+.
T Consensus       138 ~~~~~E~~~~~~~~~~y~~----~E~~~~~~~---~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~  210 (364)
T 2v6g_A          138 DPPYTEDLPRLKYMNFYYD----LEDIMLEEV---EKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVL  210 (364)
T ss_dssp             CSSBCTTSCCCSSCCHHHH----HHHHHHHHH---TTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCB
T ss_pred             CCCCCccccCCccchhhHH----HHHHHHHHh---hcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCce
Confidence                      112335622    233333332   2245 9999999999999865432221     12222  123221


Q ss_pred             ---C---------CCCCHHHHHHHHHHhccCCCCCCccccEEEecCCc
Q 024338          232 ---G---------RYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM  267 (269)
Q Consensus       232 ---~---------~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg~  267 (269)
                         +         .+.+++|+|++++.++..+.   ..|+++++.++.
T Consensus       211 ~~~g~~~~~~~~~~~~~v~Dva~a~~~~~~~~~---~~g~~~ni~~~~  255 (364)
T 2v6g_A          211 RFTGCKAAWDGYSDCSDADLIAEHHIWAAVDPY---AKNEAFNVSNGD  255 (364)
T ss_dssp             CCCSCHHHHHSCBCCEEHHHHHHHHHHHHHCGG---GTTEEEEECCSC
T ss_pred             ecCCCcccccccCCCCcHHHHHHHHHHHHhCCC---CCCceEEecCCC
Confidence               1         22345999999999986532   368899987763

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.66  E-value=5.8e-16  Score=132.38  Aligned_cols=198  Identities=12%  Similarity=0.085  Sum_probs=127.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCC-----HHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARS-----SKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      .++++||||+|+||.+++++|+++|++|+++ .|+     ++..+.+ +.+.  ...+.++.+|++|.+++.++++    
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~-~R~~~~~~~~~~~~~-~~~~--~~~~~~~~~D~~d~~~l~~~~~----   75 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVL-FRPEVVSNIDKVQML-LYFK--QLGAKLIEASLDDHQRLVDALK----   75 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEE-CCSCCSSCHHHHHHH-HHHH--TTTCEEECCCSSCHHHHHHHHT----
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEE-ECCCcccchhHHHHH-HHHH--hCCeEEEeCCCCCHHHHHHHHh----
Confidence            4679999999999999999999999999885 565     3333222 2332  3457889999999998888775    


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCeEEEEcCCccccC------CCCC
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK-KGRIINIASVVGLVG------NIGQ  173 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~------~~~~  173 (269)
                         ++|+|||+++.....               .|+.+...+++++    .+.+ .+++|+ |+......      .|..
T Consensus        76 ---~~d~vi~~a~~~~~~---------------~~~~~~~~l~~aa----~~~g~v~~~v~-S~~g~~~~~~~~~~~p~~  132 (313)
T 1qyd_A           76 ---QVDVVISALAGGVLS---------------HHILEQLKLVEAI----KEAGNIKRFLP-SEFGMDPDIMEHALQPGS  132 (313)
T ss_dssp             ---TCSEEEECCCCSSSS---------------TTTTTHHHHHHHH----HHSCCCSEEEC-SCCSSCTTSCCCCCSSTT
T ss_pred             ---CCCEEEECCccccch---------------hhHHHHHHHHHHH----HhcCCCceEEe-cCCcCCccccccCCCCCc
Confidence               699999999965331               1455544444444    4455 678875 43321111      2345


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHH----HH--H---HHhcCCCCCCCCHHHHHHHH
Q 024338          174 ANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDL----EK--K---ILEKIPLGRYGQPEEVAGLV  244 (269)
Q Consensus       174 ~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~----~~--~---~~~~~~~~~~~~~~~~a~~~  244 (269)
                      ..| .+|.+++.+.+       ..|++++.++||++.+++........    ..  .   .........+.+++|+|+++
T Consensus       133 ~~y-~sK~~~e~~~~-------~~g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~  204 (313)
T 1qyd_A          133 ITF-IDKRKVRRAIE-------AASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYT  204 (313)
T ss_dssp             HHH-HHHHHHHHHHH-------HTTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHH
T ss_pred             chH-HHHHHHHHHHH-------hcCCCeEEEEeceeccccccccccccccccCCCCeEEEeCCCCceEEEEEHHHHHHHH
Confidence            678 99998887764       24789999999987654322111000    00  0   00000111245799999999


Q ss_pred             HHhccCCCCCCccccEEEecC
Q 024338          245 EFLALNPAAGYITGQVLTIDG  265 (269)
Q Consensus       245 ~~l~~~~~~~~~~G~~i~~dg  265 (269)
                      +.++..+.   ..|+.+.+.|
T Consensus       205 ~~~l~~~~---~~~~~~~~~g  222 (313)
T 1qyd_A          205 IKSIDDPQ---TLNKTMYIRP  222 (313)
T ss_dssp             HHHTTCGG---GSSSEEECCC
T ss_pred             HHHHhCcc---cCCceEEEeC
Confidence            99986542   2367676654

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.65  E-value=1.1e-16  Score=137.42  Aligned_cols=193  Identities=12%  Similarity=0.093  Sum_probs=123.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCH------HHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHH
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSS------KEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAV   99 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~------~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~   99 (269)
                      .++++||||+|+||.+++++|+++|++|+++ .|+.      +..+ ...++..  ..+.++.+|++|.+++.++++   
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~-~R~~~~~~~~~~~~-~l~~~~~--~~v~~v~~D~~d~~~l~~a~~---   76 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIY-ARPLTPDSTPSSVQ-LREEFRS--MGVTIIEGEMEEHEKMVSVLK---   76 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEE-ECCCCTTCCHHHHH-HHHHHHH--TTCEEEECCTTCHHHHHHHHT---
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEE-ECCcccccChHHHH-HHHHhhc--CCcEEEEecCCCHHHHHHHHc---
Confidence            3679999999999999999999999999886 5553      2222 2233332  357789999999998888776   


Q ss_pred             HhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCeEEEEcCCccccC---C---CC
Q 024338          100 DAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK-KGRIINIASVVGLVG---N---IG  172 (269)
Q Consensus       100 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~---~---~~  172 (269)
                          ++|+|||+++...                   +.+.    +.+++.+.+.+ .+++|  .|..+...   .   |.
T Consensus        77 ----~~d~vi~~a~~~~-------------------~~~~----~~l~~aa~~~g~v~~~v--~S~~g~~~~~~~~~~p~  127 (321)
T 3c1o_A           77 ----QVDIVISALPFPM-------------------ISSQ----IHIINAIKAAGNIKRFL--PSDFGCEEDRIKPLPPF  127 (321)
T ss_dssp             ----TCSEEEECCCGGG-------------------SGGG----HHHHHHHHHHCCCCEEE--CSCCSSCGGGCCCCHHH
T ss_pred             ----CCCEEEECCCccc-------------------hhhH----HHHHHHHHHhCCccEEe--ccccccCccccccCCCc
Confidence                6899999998531                   2232    33444444445 67887  34433211   1   12


Q ss_pred             ChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc-------Ch-HHHHHHHhcCCCCCCCCHHHHHHHH
Q 024338          173 QANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL-------GE-DLEKKILEKIPLGRYGQPEEVAGLV  244 (269)
Q Consensus       173 ~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-------~~-~~~~~~~~~~~~~~~~~~~~~a~~~  244 (269)
                      ...| .+|.+++.+.+.       .|++++.++||++..+.....       .. ..............+.+++|+|+++
T Consensus       128 ~~~y-~sK~~~e~~~~~-------~~~~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  199 (321)
T 3c1o_A          128 ESVL-EKKRIIRRAIEA-------AALPYTYVSANCFGAYFVNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYT  199 (321)
T ss_dssp             HHHH-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHHHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHH
T ss_pred             chHH-HHHHHHHHHHHH-------cCCCeEEEEeceeccccccccccccccccccCceEEecCCCcceeEeeHHHHHHHH
Confidence            4579 999998887752       268888999998765422100       00 0000000000112345899999999


Q ss_pred             HHhccCCCCCCccccEEEecC
Q 024338          245 EFLALNPAAGYITGQVLTIDG  265 (269)
Q Consensus       245 ~~l~~~~~~~~~~G~~i~~dg  265 (269)
                      +.++..+.   ..|+++.+.|
T Consensus       200 ~~~l~~~~---~~g~~~~~~g  217 (321)
T 3c1o_A          200 IKVACDPR---CCNRIVIYRP  217 (321)
T ss_dssp             HHHHHCGG---GTTEEEECCC
T ss_pred             HHHHhCcc---ccCeEEEEeC
Confidence            99996543   2377777764

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.63  E-value=1.5e-15  Score=138.98  Aligned_cols=202  Identities=15%  Similarity=0.079  Sum_probs=134.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTV  105 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i  105 (269)
                      +++||||||+|.||.++++.|+++|++|+++ .|+....              ..+.+|+.+..         .+.+.++
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l-~R~~~~~--------------~~v~~d~~~~~---------~~~l~~~  202 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQL-VRKEPKP--------------GKRFWDPLNPA---------SDLLDGA  202 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEE-ESSSCCT--------------TCEECCTTSCC---------TTTTTTC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEE-ECCCCCc--------------cceeecccchh---------HHhcCCC
Confidence            6799999999999999999999999999986 5554321              12677886421         2333589


Q ss_pred             cEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccC-----------CCCCh
Q 024338          106 DILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVG-----------NIGQA  174 (269)
Q Consensus       106 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~-----------~~~~~  174 (269)
                      |+|||+|+.....   ..+.+..+..+++|+.++..+++++.   .+.+.+++|++||...+-.           .++..
T Consensus       203 D~Vih~A~~~~~~---~~~~~~~~~~~~~Nv~gt~~ll~a~a---~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~~~~  276 (516)
T 3oh8_A          203 DVLVHLAGEPIFG---RFNDSHKEAIRESRVLPTKFLAELVA---ESTQCTTMISASAVGFYGHDRGDEILTEESESGDD  276 (516)
T ss_dssp             SEEEECCCC--------CCGGGHHHHHHHTHHHHHHHHHHHH---HCSSCCEEEEEEEGGGGCSEEEEEEECTTSCCCSS
T ss_pred             CEEEECCCCcccc---ccchhHHHHHHHHHHHHHHHHHHHHH---hcCCCCEEEEeCcceEecCCCCCCccCCCCCCCcC
Confidence            9999999975332   33456778899999999998888743   2345679999999765430           12445


Q ss_pred             hhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhc--CCC------CCCCCHHHHHHHHHH
Q 024338          175 NYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEK--IPL------GRYGQPEEVAGLVEF  246 (269)
Q Consensus       175 ~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~--~~~------~~~~~~~~~a~~~~~  246 (269)
                      .|+.+|...+.+..    +....|++++.+.||.+.++... ..+.+......+  ...      ..+..++|+|++++.
T Consensus       277 ~y~~~~~~~E~~~~----~~~~~gi~~~ilRp~~v~Gp~~~-~~~~~~~~~~~g~~~~~g~g~~~~~~i~v~Dva~ai~~  351 (516)
T 3oh8_A          277 FLAEVCRDWEHATA----PASDAGKRVAFIRTGVALSGRGG-MLPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIYYR  351 (516)
T ss_dssp             HHHHHHHHHHHTTH----HHHHTTCEEEEEEECEEEBTTBS-HHHHHHHTTC---CCCCTTSCCEECEEEHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHH----HHHhCCCCEEEEEeeEEECCCCC-hHHHHHHHHHhCCCcccCCCCceEceEeHHHHHHHHHH
Confidence            68888887665533    33456899999999999987521 112221111111  111      134578999999999


Q ss_pred             hccCCCCCCccccEEEecCC
Q 024338          247 LALNPAAGYITGQVLTIDGG  266 (269)
Q Consensus       247 l~~~~~~~~~~G~~i~~dgg  266 (269)
                      ++..+.   ..| .+++.++
T Consensus       352 ~l~~~~---~~g-~~ni~~~  367 (516)
T 3oh8_A          352 AIVDAQ---ISG-PINAVAP  367 (516)
T ss_dssp             HHHCTT---CCE-EEEESCS
T ss_pred             HHhCcc---cCC-cEEEECC
Confidence            996543   234 5555544

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.62  E-value=9.8e-16  Score=130.67  Aligned_cols=194  Identities=16%  Similarity=0.182  Sum_probs=122.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCH------HHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHH
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSS------KEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAV   99 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~------~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~   99 (269)
                      .++++||||+|+||.++++.|+++|++|+++ .|+.      +..+ ..+.+.  ...+.++.+|++|.+++.++++   
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l-~R~~~~~~~~~~~~-~~~~l~--~~~v~~v~~D~~d~~~l~~~~~---   76 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLL-VRESTASSNSEKAQ-LLESFK--ASGANIVHGSIDDHASLVEAVK---   76 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEE-CCCCCTTTTHHHHH-HHHHHH--TTTCEEECCCTTCHHHHHHHHH---
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEE-ECCcccccCHHHHH-HHHHHH--hCCCEEEEeccCCHHHHHHHHc---
Confidence            4679999999999999999999999999885 5552      2222 223332  3457889999999999888876   


Q ss_pred             HhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCeEEEEcCCccccC-----CCCC
Q 024338          100 DAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK-KGRIINIASVVGLVG-----NIGQ  173 (269)
Q Consensus       100 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~-----~~~~  173 (269)
                          ++|+|||+++...                   +.+...    +++.+++.+ .+++|+ |+......     .|..
T Consensus        77 ----~~d~vi~~a~~~~-------------------~~~~~~----l~~aa~~~g~v~~~v~-S~~g~~~~~~~~~~p~~  128 (308)
T 1qyc_A           77 ----NVDVVISTVGSLQ-------------------IESQVN----IIKAIKEVGTVKRFFP-SEFGNDVDNVHAVEPAK  128 (308)
T ss_dssp             ----TCSEEEECCCGGG-------------------SGGGHH----HHHHHHHHCCCSEEEC-SCCSSCTTSCCCCTTHH
T ss_pred             ----CCCEEEECCcchh-------------------hhhHHH----HHHHHHhcCCCceEee-cccccCccccccCCcch
Confidence                6899999998531                   222233    334444444 678873 44322211     1224


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHH---HH--H---HHhcCCCCCCCCHHHHHHHHH
Q 024338          174 ANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDL---EK--K---ILEKIPLGRYGQPEEVAGLVE  245 (269)
Q Consensus       174 ~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~---~~--~---~~~~~~~~~~~~~~~~a~~~~  245 (269)
                      ..| .+|.+++.+.+.       .|++++.+.||++.++.........   ..  .   .........+.+++|+|++++
T Consensus       129 ~~y-~sK~~~e~~~~~-------~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  200 (308)
T 1qyc_A          129 SVF-EVKAKVRRAIEA-------EGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTI  200 (308)
T ss_dssp             HHH-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHH
T ss_pred             hHH-HHHHHHHHHHHh-------cCCCeEEEEeceeccccccccccccccCCCCCceEEecCCCceEEEecHHHHHHHHH
Confidence            578 999988877653       3788899999977654321110000   00  0   000001122457899999999


Q ss_pred             HhccCCCCCCccccEEEecC
Q 024338          246 FLALNPAAGYITGQVLTIDG  265 (269)
Q Consensus       246 ~l~~~~~~~~~~G~~i~~dg  265 (269)
                      .++..+.   ..|+++.+.|
T Consensus       201 ~~l~~~~---~~~~~~~~~g  217 (308)
T 1qyc_A          201 KAVDDPR---TLNKTLYLRL  217 (308)
T ss_dssp             TTSSCGG---GTTEEEECCC
T ss_pred             HHHhCcc---ccCeEEEEeC
Confidence            9986542   2367777653

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.60  E-value=3.8e-16  Score=134.05  Aligned_cols=189  Identities=14%  Similarity=0.135  Sum_probs=120.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCcc
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVD  106 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id  106 (269)
                      |++|||||+|+||.+++++|+++|++|+++ .|+.+...+..+++..  ..+.++.+|++|.+++.++++       ++|
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l-~R~~~~~~~~~~~l~~--~~v~~v~~Dl~d~~~l~~a~~-------~~d   81 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVF-TRPNSSKTTLLDEFQS--LGAIIVKGELDEHEKLVELMK-------KVD   81 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEE-ECTTCSCHHHHHHHHH--TTCEEEECCTTCHHHHHHHHT-------TCS
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEE-ECCCCchhhHHHHhhc--CCCEEEEecCCCHHHHHHHHc-------CCC
Confidence            679999999999999999999999999885 5554311122223332  347789999999998888776       699


Q ss_pred             EEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCeEEEEcCCccccC---C---CCChhhHHh
Q 024338          107 ILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK-KGRIINIASVVGLVG---N---IGQANYSAA  179 (269)
Q Consensus       107 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~---~---~~~~~Y~~s  179 (269)
                      +|||+++...                   +.+.    +.+++.+++.+ .+++|+ |+ .+...   .   |....| .+
T Consensus        82 ~vi~~a~~~~-------------------~~~~----~~l~~aa~~~g~v~~~v~-S~-~g~~~~~~~~~~p~~~~y-~s  135 (318)
T 2r6j_A           82 VVISALAFPQ-------------------ILDQ----FKILEAIKVAGNIKRFLP-SD-FGVEEDRINALPPFEALI-ER  135 (318)
T ss_dssp             EEEECCCGGG-------------------STTH----HHHHHHHHHHCCCCEEEC-SC-CSSCTTTCCCCHHHHHHH-HH
T ss_pred             EEEECCchhh-------------------hHHH----HHHHHHHHhcCCCCEEEe-ec-cccCcccccCCCCcchhH-HH
Confidence            9999998531                   2222    33444444444 678874 43 33211   1   123468 99


Q ss_pred             HHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHH---------HhcCCCCCCCCHHHHHHHHHHhccC
Q 024338          180 KAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKI---------LEKIPLGRYGQPEEVAGLVEFLALN  250 (269)
Q Consensus       180 K~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~a~~~~~l~~~  250 (269)
                      |.+++.+.+.       .|++++.+.||++..++..    .+....         ........+.+++|+|++++.++..
T Consensus       136 K~~~e~~~~~-------~~~~~~~lr~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~  204 (318)
T 2r6j_A          136 KRMIRRAIEE-------ANIPYTYVSANCFASYFIN----YLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATD  204 (318)
T ss_dssp             HHHHHHHHHH-------TTCCBEEEECCEEHHHHHH----HHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHh-------cCCCeEEEEcceehhhhhh----hhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcC
Confidence            9988877653       4788999999976543211    000000         0000111245799999999999865


Q ss_pred             CCCCCccccEEEecC
Q 024338          251 PAAGYITGQVLTIDG  265 (269)
Q Consensus       251 ~~~~~~~G~~i~~dg  265 (269)
                      +.   ..|+.+.+.|
T Consensus       205 ~~---~~~~~~~~~g  216 (318)
T 2r6j_A          205 PR---ALNRVVIYRP  216 (318)
T ss_dssp             GG---GTTEEEECCC
T ss_pred             cc---ccCeEEEecC
Confidence            43   1356666643

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.47  E-value=2.4e-12  Score=109.30  Aligned_cols=200  Identities=17%  Similarity=0.150  Sum_probs=124.8

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCccE
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDI  107 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~  107 (269)
                      .||||||+|.||.+++++|.++|++|+++ .|++..            .+   +..|     ..      ..+.+..+|.
T Consensus         2 kILVTGatGfIG~~L~~~L~~~G~~V~~l-~R~~~~------------~~---~~~~-----~~------~~~~l~~~d~   54 (298)
T 4b4o_A            2 RVLVGGGTGFIGTALTQLLNARGHEVTLV-SRKPGP------------GR---ITWD-----EL------AASGLPSCDA   54 (298)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEE-ESSCCT------------TE---EEHH-----HH------HHHCCCSCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEE-ECCCCc------------Ce---eecc-----hh------hHhhccCCCE
Confidence            48999999999999999999999999996 554321            11   1111     11      1233468999


Q ss_pred             EEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCC-----------CCChhh
Q 024338          108 LINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGN-----------IGQANY  176 (269)
Q Consensus       108 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~-----------~~~~~Y  176 (269)
                      +||.|+..........+....+..++.|+.++..+.+.+...  ..+..++|+.||...+-+.           .+...|
T Consensus        55 vihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~--~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~~  132 (298)
T 4b4o_A           55 AVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKA--PQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDFF  132 (298)
T ss_dssp             EEECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHC--SSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSHH
T ss_pred             EEEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHh--CCCceEEEEEeeeeeecCCCCCcccccCCccccchh
Confidence            999998654444445577778889999999977766655431  2234457777776544221           123345


Q ss_pred             HHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcC--CC------CCCCCHHHHHHHHHHhc
Q 024338          177 SAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKI--PL------GRYGQPEEVAGLVEFLA  248 (269)
Q Consensus       177 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~--~~------~~~~~~~~~a~~~~~l~  248 (269)
                      +..+...+.     +......++++..+.||.+..|..... ..+........  ++      ..+..++|+++++.+++
T Consensus       133 ~~~~~~~e~-----~~~~~~~~~~~~~~r~~~v~g~~~~~~-~~~~~~~~~~~~~~~g~g~~~~~~ihv~Dva~a~~~~~  206 (298)
T 4b4o_A          133 SNLVTKWEA-----AARLPGDSTRQVVVRSGVVLGRGGGAM-GHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGILTHAL  206 (298)
T ss_dssp             HHHHHHHHH-----HHCCSSSSSEEEEEEECEEECTTSHHH-HHHHHHHHTTCCCCBTTSCSBCCEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHH-----HHHhhccCCceeeeeeeeEEcCCCCch-hHHHHHHhcCCcceecccCceeecCcHHHHHHHHHHHH
Confidence            555443332     123456689999999999988743211 22222222111  11      22346899999999998


Q ss_pred             cCCCCCCccccEEEecCC
Q 024338          249 LNPAAGYITGQVLTIDGG  266 (269)
Q Consensus       249 ~~~~~~~~~G~~i~~dgg  266 (269)
                      ..+.   ..| ++++-++
T Consensus       207 ~~~~---~~g-~yn~~~~  220 (298)
T 4b4o_A          207 EANH---VHG-VLNGVAP  220 (298)
T ss_dssp             HCTT---CCE-EEEESCS
T ss_pred             hCCC---CCC-eEEEECC
Confidence            6653   234 6666554

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.32  E-value=2.5e-13  Score=114.97  Aligned_cols=85  Identities=16%  Similarity=0.248  Sum_probs=70.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      .++++|++|||||+||+|+++++.|+++|++|++ +.|+.++.+++.+++... .++.++.+|++|.++++++++     
T Consensus       115 ~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i-~~R~~~~~~~l~~~~~~~-~~~~~~~~D~~~~~~~~~~~~-----  187 (287)
T 1lu9_A          115 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVL-CGRKLDKAQAAADSVNKR-FKVNVTAAETADDASRAEAVK-----  187 (287)
T ss_dssp             SCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEE-EESSHHHHHHHHHHHHHH-HTCCCEEEECCSHHHHHHHTT-----
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEE-EECCHHHHHHHHHHHHhc-CCcEEEEecCCCHHHHHHHHH-----
Confidence            4578999999999999999999999999999776 688888888888777542 134567899999988877665     


Q ss_pred             cCCccEEEEccCCC
Q 024338          102 WGTVDILINNAGIT  115 (269)
Q Consensus       102 ~~~id~li~~ag~~  115 (269)
                        .+|+||||+|..
T Consensus       188 --~~DvlVn~ag~g  199 (287)
T 1lu9_A          188 --GAHFVFTAGAIG  199 (287)
T ss_dssp             --TCSEEEECCCTT
T ss_pred             --hCCEEEECCCcc
Confidence              589999999854

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.14  E-value=7.5e-11  Score=101.56  Aligned_cols=149  Identities=16%  Similarity=0.136  Sum_probs=98.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-------cEEEEecCCH--HHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHH
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGC-------KVLVNYARSS--KEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKT   97 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~-------~v~i~~~r~~--~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~   97 (269)
                      .+++||||+|.||.+++..|+++|.       +|++ .++++  +..+.....+......  ++ .|+.+.++..++++ 
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l-~D~~~~~~~~~g~~~dl~~~~~~--~~-~di~~~~~~~~a~~-   79 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQL-LEIPQAMKALEGVVMELEDCAFP--LL-AGLEATDDPKVAFK-   79 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEE-ECCGGGHHHHHHHHHHHHTTTCT--TE-EEEEEESCHHHHTT-
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEE-EeCCCchhhccchhhhhhccccc--cc-CCeEeccChHHHhC-
Confidence            3699999999999999999999996       6666 46553  2233223334321111  12 46655444444432 


Q ss_pred             HHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcc--------cc-
Q 024338           98 AVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVG--------LV-  168 (269)
Q Consensus        98 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~--------~~-  168 (269)
                            +.|+|||.||.....   .   +...+.++.|+.++..+++++...-  ..+.+++++|+...        .. 
T Consensus        80 ------~~D~Vih~Ag~~~~~---~---~~~~~~~~~Nv~~t~~l~~a~~~~~--~~~~~vvv~snp~~~~~~~~~~~~~  145 (327)
T 1y7t_A           80 ------DADYALLVGAAPRKA---G---MERRDLLQVNGKIFTEQGRALAEVA--KKDVKVLVVGNPANTNALIAYKNAP  145 (327)
T ss_dssp             ------TCSEEEECCCCCCCT---T---CCHHHHHHHHHHHHHHHHHHHHHHS--CTTCEEEECSSSHHHHHHHHHHTCT
T ss_pred             ------CCCEEEECCCcCCCC---C---CCHHHHHHHHHHHHHHHHHHHHhhc--CCCeEEEEeCCchhhhHHHHHHHcC
Confidence                  789999999975421   1   2335689999999888887776531  14568888888652        11 


Q ss_pred             CCCCChhhHHhHHHHHHHHHHHHHHh
Q 024338          169 GNIGQANYSAAKAGVIGLTKTVAKEY  194 (269)
Q Consensus       169 ~~~~~~~Y~~sK~al~~~~~~la~e~  194 (269)
                      +.++...|+.+|...+.+...++..+
T Consensus       146 ~~~p~~~yg~tkl~~er~~~~~a~~~  171 (327)
T 1y7t_A          146 GLNPRNFTAMTRLDHNRAKAQLAKKT  171 (327)
T ss_dssp             TSCGGGEEECCHHHHHHHHHHHHHHH
T ss_pred             CCChhheeccchHHHHHHHHHHHHHh
Confidence            24455679999999999888888765

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=99.06  E-value=4e-10  Score=91.17  Aligned_cols=153  Identities=10%  Similarity=0.061  Sum_probs=89.9

Q ss_pred             CCCCCEEEEeCC----------------CCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCC
Q 024338           23 NVEAPVAVVTGA----------------SRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVS   86 (269)
Q Consensus        23 ~~~~k~vlItGa----------------s~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls   86 (269)
                      +++||++|||||                ||++|+++|+.|+++|++|+++ .++.. ++     .   ...+  -.+|++
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~-~~~~~-l~-----~---~~g~--~~~dv~   72 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLV-SGPVS-LP-----T---PPFV--KRVDVM   72 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEE-ECSCC-CC-----C---CTTE--EEEECC
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEE-ECCcc-cc-----c---CCCC--eEEccC
Confidence            578999999999                6899999999999999999885 44321 10     0   1112  246888


Q ss_pred             CHHHHHHHHHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHH--HHHHhHHHHHHHHHHHHHHHhC-CCCeEEEEcC
Q 024338           87 KEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDV--IDLNLTGVFLCTQAAAKIMMKK-KKGRIINIAS  163 (269)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~--~~~n~~~~~~l~~~~~~~l~~~-~~~~iv~isS  163 (269)
                      +.++   +++.+.+.++++|++|||||+....++. ...+.+...  -+.+..-.+....-+++.+.+. ..+.++ |+ 
T Consensus        73 ~~~~---~~~~v~~~~~~~Dili~~Aav~d~~p~~-~~~~KIkk~~~~~~~l~l~L~~~pdIL~~l~~~~~~~~~~-VG-  146 (226)
T 1u7z_A           73 TALE---MEAAVNASVQQQNIFIGCAAVADYRAAT-VAPEKIKKQATQGDELTIKMVKNPDIVAGVAALKDHRPYV-VG-  146 (226)
T ss_dssp             SHHH---HHHHHHHHGGGCSEEEECCBCCSEEESS-CCSSCC-------CEEEEEEEECCCHHHHHHHCSSSCCEE-EE-
T ss_pred             cHHH---HHHHHHHhcCCCCEEEECCcccCCCCcc-CChHHhccccccCCceEEEEeecHHHHHHHHhhhcCCcEE-EE-
Confidence            7554   5566777888999999999987544432 222222220  0112222223334455555443 223321 21 


Q ss_pred             CccccCCCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCC
Q 024338          164 VVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGF  208 (269)
Q Consensus       164 ~~~~~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~  208 (269)
                      ..+..               +.+.+....++.++|+.+...+|--
T Consensus       147 FaaEt---------------~~l~e~A~~kL~~k~~d~ivaN~~~  176 (226)
T 1u7z_A          147 FAAET---------------NNVEEYARQKRIRKNLDLICANDVS  176 (226)
T ss_dssp             EEEES---------------SSHHHHHHHHHHHHTCSEEEEEECS
T ss_pred             cchhh---------------chHHHHHHHHHHhcCCCEEEEeecc
Confidence            11111               2255556667777787777776643

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.89  E-value=2.9e-09  Score=86.29  Aligned_cols=91  Identities=12%  Similarity=0.171  Sum_probs=62.5

Q ss_pred             CCCEEEEeCC----------------CCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCH
Q 024338           25 EAPVAVVTGA----------------SRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKE   88 (269)
Q Consensus        25 ~~k~vlItGa----------------s~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~   88 (269)
                      +||++|||||                ||++|.++|+.|+++|++|+++ .++.. +..      .....+..  .|+.  
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv-~~~~~-~~~------~~~~~~~~--~~v~--   69 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLI-TTKRA-LKP------EPHPNLSI--REIT--   69 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEE-ECTTS-CCC------CCCTTEEE--EECC--
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEE-eCCcc-ccc------cCCCCeEE--EEHh--
Confidence            5899999999                7889999999999999999985 55432 100      00112322  3444  


Q ss_pred             HHHHHHHHHHHHhcCCccEEEEccCCCCCCcccCCCHHHH
Q 024338           89 ADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQW  128 (269)
Q Consensus        89 ~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~  128 (269)
                       +++++++.+.+.++++|++|+||+.....+....+.+++
T Consensus        70 -s~~em~~~v~~~~~~~Dili~aAAvsD~~p~~~~~~e~~  108 (232)
T 2gk4_A           70 -NTKDLLIEMQERVQDYQVLIHSMAVSDYTPVYMTGLEEV  108 (232)
T ss_dssp             -SHHHHHHHHHHHGGGCSEEEECSBCCSEEEEEEEEHHHH
T ss_pred             -HHHHHHHHHHHhcCCCCEEEEcCccccccchhhcchhhh
Confidence             466666777777889999999999876655543343333

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.85  E-value=1.5e-08  Score=73.28  Aligned_cols=73  Identities=22%  Similarity=0.150  Sum_probs=59.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcC-CcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAG-CKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G-~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      +++++|+|+ |++|..+++.|.++| ++|++ ..|+++..+.+.      ...+..+.+|+++.+++.++++       +
T Consensus         5 ~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~-~~r~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~~-------~   69 (118)
T 3ic5_A            5 RWNICVVGA-GKIGQMIAALLKTSSNYSVTV-ADHDLAALAVLN------RMGVATKQVDAKDEAGLAKALG-------G   69 (118)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHCSSEEEEE-EESCHHHHHHHH------TTTCEEEECCTTCHHHHHHHTT-------T
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhCCCceEEE-EeCCHHHHHHHH------hCCCcEEEecCCCHHHHHHHHc-------C
Confidence            578999999 999999999999999 77776 588887666543      2345678899999887777654       7


Q ss_pred             ccEEEEccC
Q 024338          105 VDILINNAG  113 (269)
Q Consensus       105 id~li~~ag  113 (269)
                      +|++|++++
T Consensus        70 ~d~vi~~~~   78 (118)
T 3ic5_A           70 FDAVISAAP   78 (118)
T ss_dssp             CSEEEECSC
T ss_pred             CCEEEECCC
Confidence            999999995

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=98.77  E-value=5.1e-09  Score=80.41  Aligned_cols=78  Identities=18%  Similarity=0.184  Sum_probs=63.1

Q ss_pred             CchHHHHHHHHHHcCCcEEEEecCCHHHHH---HHHHHHHHcCCcEEEEEccCCCH--HHHHHHHHHHHHhcCCccEEEE
Q 024338           36 RGIGRAVATSLGKAGCKVLVNYARSSKEAE---EVCKEIEASGGQALTFGGDVSKE--ADVESMIKTAVDAWGTVDILIN  110 (269)
Q Consensus        36 ~giG~~~a~~l~~~G~~v~i~~~r~~~~~~---~~~~~l~~~~~~~~~~~~Dls~~--~~~~~~~~~~~~~~~~id~li~  110 (269)
                      +-++.+.++.|++.|++|++. .|+.....   +..+.+++.+.+...+++|++++  ++++++++.+.+.+|+ |+|||
T Consensus        26 ~~p~~a~a~~La~~Ga~vvi~-~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVLVn  103 (157)
T 3gxh_A           26 GLPNEQQFSLLKQAGVDVVIN-LMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVLVH  103 (157)
T ss_dssp             BCCCHHHHHHHHHTTCCEEEE-CSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEEEE
T ss_pred             CCCCHHHHHHHHHcCCCEEEE-CCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEEEE
Confidence            357789999999999999985 55433221   23555666678888899999999  9999999999999999 99999


Q ss_pred             ccCCC
Q 024338          111 NAGIT  115 (269)
Q Consensus       111 ~ag~~  115 (269)
                      |||+.
T Consensus       104 nAgg~  108 (157)
T 3gxh_A          104 CLANY  108 (157)
T ss_dssp             CSBSH
T ss_pred             CCCCC
Confidence            99963

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.72  E-value=9.3e-08  Score=84.54  Aligned_cols=81  Identities=20%  Similarity=0.260  Sum_probs=68.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC---cEEEEecCCHHHHHHHHHHHHHc-CCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGC---KVLVNYARSSKEAEEVCKEIEAS-GGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~---~v~i~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      ++++|+|| |++|+++++.|+++|.   .|++ .+|+.++++++.+++... +.++..+.+|++|.+++++++++.    
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v-~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~----   75 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITL-ASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV----   75 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEE-EESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH----
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEE-EECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh----
Confidence            57999999 8999999999999984   6665 689999999888888653 245788999999999999998865    


Q ss_pred             CCccEEEEccCC
Q 024338          103 GTVDILINNAGI  114 (269)
Q Consensus       103 ~~id~li~~ag~  114 (269)
                       ++|+||||++.
T Consensus        76 -~~DvVin~ag~   86 (405)
T 4ina_A           76 -KPQIVLNIALP   86 (405)
T ss_dssp             -CCSEEEECSCG
T ss_pred             -CCCEEEECCCc
Confidence             69999999973

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=98.65  E-value=2.1e-11  Score=108.81  Aligned_cols=47  Identities=28%  Similarity=0.379  Sum_probs=39.3

Q ss_pred             ccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHH
Q 024338           20 AAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVC   68 (269)
Q Consensus        20 ~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~   68 (269)
                      +...+.||+++|||++ +||+++|+.|+..|++|++ +.+++....+..
T Consensus       259 tg~~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv-~D~~~~~a~~Aa  305 (488)
T 3ond_A          259 TDVMIAGKVAVVAGYG-DVGKGCAAALKQAGARVIV-TEIDPICALQAT  305 (488)
T ss_dssp             HCCCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEE-ECSCHHHHHHHH
T ss_pred             cCCcccCCEEEEECCC-HHHHHHHHHHHHCCCEEEE-EcCCHHHHHHHH
Confidence            3467899999999987 9999999999999999888 578876654433

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.57  E-value=1.3e-07  Score=84.75  Aligned_cols=78  Identities=21%  Similarity=0.284  Sum_probs=61.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      ++|+++||| +|++|+++++.|++.|++|++ ..|+.++.+++.+.+    ..+..+.+|++|.+++.++++       +
T Consensus         2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v-~~R~~~~a~~la~~~----~~~~~~~~Dv~d~~~l~~~l~-------~   68 (450)
T 1ff9_A            2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTV-ACRTLESAKKLSAGV----QHSTPISLDVNDDAALDAEVA-------K   68 (450)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEE-EESSHHHHHHTTTTC----TTEEEEECCTTCHHHHHHHHT-------T
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEE-EECCHHHHHHHHHhc----CCceEEEeecCCHHHHHHHHc-------C
Confidence            478999998 799999999999999999777 588877665554332    246778899999988877664       7


Q ss_pred             ccEEEEccCCC
Q 024338          105 VDILINNAGIT  115 (269)
Q Consensus       105 id~li~~ag~~  115 (269)
                      +|+||||++..
T Consensus        69 ~DvVIn~a~~~   79 (450)
T 1ff9_A           69 HDLVISLIPYT   79 (450)
T ss_dssp             SSEEEECCC--
T ss_pred             CcEEEECCccc
Confidence            99999999853

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.56  E-value=1.5e-07  Score=82.30  Aligned_cols=107  Identities=20%  Similarity=0.260  Sum_probs=73.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      .+++++++|+|+ |++|..+++.+...|++|++ .++++++++.+.+.+   +..   +.+|.++.+++.+++.      
T Consensus       163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~-~d~~~~~~~~~~~~~---g~~---~~~~~~~~~~l~~~~~------  228 (369)
T 2eez_A          163 GVAPASVVILGG-GTVGTNAAKIALGMGAQVTI-LDVNHKRLQYLDDVF---GGR---VITLTATEANIKKSVQ------  228 (369)
T ss_dssp             BBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHT---TTS---EEEEECCHHHHHHHHH------
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEE-EECCHHHHHHHHHhc---Cce---EEEecCCHHHHHHHHh------
Confidence            478899999999 99999999999999999887 578877666544333   333   4567788777766654      


Q ss_pred             CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCc
Q 024338          103 GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVV  165 (269)
Q Consensus       103 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  165 (269)
                       ..|++|++++.....                   .+..+.+..++.|  ++++.||++++..
T Consensus       229 -~~DvVi~~~g~~~~~-------------------~~~li~~~~l~~m--k~gg~iV~v~~~~  269 (369)
T 2eez_A          229 -HADLLIGAVLVPGAK-------------------APKLVTRDMLSLM--KEGAVIVDVAVDQ  269 (369)
T ss_dssp             -HCSEEEECCC--------------------------CCSCHHHHTTS--CTTCEEEECC---
T ss_pred             -CCCEEEECCCCCccc-------------------cchhHHHHHHHhh--cCCCEEEEEecCC
Confidence             689999999864211                   0122345556666  4678999998754

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.48  E-value=3.1e-07  Score=72.86  Aligned_cols=103  Identities=19%  Similarity=0.264  Sum_probs=68.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      +|+++|||||++|||.++++.+...|++|++ +.++++..+..    ++.+...   .+|.++.+..+.+.+.. . .++
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~-~~~~~~~~~~~----~~~g~~~---~~d~~~~~~~~~~~~~~-~-~~~  107 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYT-TAGSDAKREML----SRLGVEY---VGDSRSVDFADEILELT-D-GYG  107 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEE-EESSHHHHHHH----HTTCCSE---EEETTCSTHHHHHHHHT-T-TCC
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEE-EeCCHHHHHHH----HHcCCCE---EeeCCcHHHHHHHHHHh-C-CCC
Confidence            6899999999999999999999999999887 46776655433    2233332   24777654433333222 1 136


Q ss_pred             ccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCc
Q 024338          105 VDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVV  165 (269)
Q Consensus       105 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  165 (269)
                      +|++|+|+|.           +.               .+.+++.+  +++|++|++++..
T Consensus       108 ~D~vi~~~g~-----------~~---------------~~~~~~~l--~~~G~~v~~g~~~  140 (198)
T 1pqw_A          108 VDVVLNSLAG-----------EA---------------IQRGVQIL--APGGRFIELGKKD  140 (198)
T ss_dssp             EEEEEECCCT-----------HH---------------HHHHHHTE--EEEEEEEECSCGG
T ss_pred             CeEEEECCch-----------HH---------------HHHHHHHh--ccCCEEEEEcCCC
Confidence            9999999972           00               23444555  4568999998754

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.48  E-value=2.9e-07  Score=79.15  Aligned_cols=79  Identities=24%  Similarity=0.309  Sum_probs=58.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      .|+++|||||+++||..+++.+...|++|++ +.+++++++.+ +++   +..   ..+|.++.+++.+.+.++..  ++
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~-~~~~~~~~~~~-~~~---g~~---~~~d~~~~~~~~~~~~~~~~--~~  214 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVG-AAGSDEKIAYL-KQI---GFD---AAFNYKTVNSLEEALKKASP--DG  214 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEE-EESSHHHHHHH-HHT---TCS---EEEETTSCSCHHHHHHHHCT--TC
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEE-EeCCHHHHHHH-Hhc---CCc---EEEecCCHHHHHHHHHHHhC--CC
Confidence            6899999999999999999999999999887 46777666544 333   332   23477764455555555433  57


Q ss_pred             ccEEEEccC
Q 024338          105 VDILINNAG  113 (269)
Q Consensus       105 id~li~~ag  113 (269)
                      +|++|+|+|
T Consensus       215 ~d~vi~~~g  223 (333)
T 1v3u_A          215 YDCYFDNVG  223 (333)
T ss_dssp             EEEEEESSC
T ss_pred             CeEEEECCC
Confidence            999999998

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.48  E-value=4.9e-08  Score=82.35  Aligned_cols=82  Identities=29%  Similarity=0.314  Sum_probs=59.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      .++++|+++|||++ |+|+++++.|+++| +|++ +.|+.++.+++.+++.........+.+|+++.          .+.
T Consensus       124 ~~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v-~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~----------~~~  190 (287)
T 1nvt_A          124 GRVKDKNIVIYGAG-GAARAVAFELAKDN-NIII-ANRTVEKAEALAKEIAEKLNKKFGEEVKFSGL----------DVD  190 (287)
T ss_dssp             CCCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEE-ECSSHHHHHHHHHHHHHHHTCCHHHHEEEECT----------TCC
T ss_pred             CCcCCCEEEEECch-HHHHHHHHHHHHCC-CEEE-EECCHHHHHHHHHHHhhhcccccceeEEEeeH----------HHh
Confidence            46789999999997 99999999999999 8877 68998888888777654210000112344441          344


Q ss_pred             cCCccEEEEccCCCC
Q 024338          102 WGTVDILINNAGITR  116 (269)
Q Consensus       102 ~~~id~li~~ag~~~  116 (269)
                      ++++|+||||+|...
T Consensus       191 ~~~~DilVn~ag~~~  205 (287)
T 1nvt_A          191 LDGVDIIINATPIGM  205 (287)
T ss_dssp             CTTCCEEEECSCTTC
T ss_pred             hCCCCEEEECCCCCC
Confidence            578999999999653

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.46  E-value=2.2e-07  Score=80.38  Aligned_cols=104  Identities=19%  Similarity=0.262  Sum_probs=72.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      .|+++||+|++++||..+++.+...|++|+++ .+++++.+. .++   .+..   ...|.++.+++.+.+.++.+.  +
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~-~~~~~~~~~-~~~---~g~~---~~~d~~~~~~~~~~~~~~~~~--~  238 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGI-DGGEGKEEL-FRS---IGGE---VFIDFTKEKDIVGAVLKATDG--G  238 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECSTTHHHH-HHH---TTCC---EEEETTTCSCHHHHHHHHHTS--C
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEE-cCCHHHHHH-HHH---cCCc---eEEecCccHhHHHHHHHHhCC--C
Confidence            68999999999999999999999999998874 666655532 333   2333   234877656666666665543  7


Q ss_pred             ccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCc
Q 024338          105 VDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVV  165 (269)
Q Consensus       105 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  165 (269)
                      +|++|+|+|..          +               ..+.+++.+  +++|+++.+++..
T Consensus       239 ~D~vi~~~g~~----------~---------------~~~~~~~~l--~~~G~iv~~g~~~  272 (347)
T 2hcy_A          239 AHGVINVSVSE----------A---------------AIEASTRYV--RANGTTVLVGMPA  272 (347)
T ss_dssp             EEEEEECSSCH----------H---------------HHHHHTTSE--EEEEEEEECCCCT
T ss_pred             CCEEEECCCcH----------H---------------HHHHHHHHH--hcCCEEEEEeCCC
Confidence            99999999831          0               234444444  4568999998754

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.42  E-value=2.3e-06  Score=72.82  Aligned_cols=83  Identities=17%  Similarity=0.287  Sum_probs=63.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC-cEEEEecCC---HHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGC-KVLVNYARS---SKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKT   97 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~-~v~i~~~r~---~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~   97 (269)
                      .++++|++||+|+ ||+|++++..|++.|+ +|.+ +.|+   .++.+++.+++..... ..+...++.+.+++.+.+. 
T Consensus       150 ~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i-~nR~~~~~~~a~~la~~~~~~~~-~~~~~~~~~~~~~l~~~l~-  225 (315)
T 3tnl_A          150 HDIIGKKMTICGA-GGAATAICIQAALDGVKEISI-FNRKDDFYANAEKTVEKINSKTD-CKAQLFDIEDHEQLRKEIA-  225 (315)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEE-EECSSTTHHHHHHHHHHHHHHSS-CEEEEEETTCHHHHHHHHH-
T ss_pred             CCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEE-EECCCchHHHHHHHHHHhhhhcC-CceEEeccchHHHHHhhhc-
Confidence            4688999999998 7999999999999999 6666 6888   8888888888865432 2223346667665555444 


Q ss_pred             HHHhcCCccEEEEccCC
Q 024338           98 AVDAWGTVDILINNAGI  114 (269)
Q Consensus        98 ~~~~~~~id~li~~ag~  114 (269)
                            ..|+|||+...
T Consensus       226 ------~aDiIINaTp~  236 (315)
T 3tnl_A          226 ------ESVIFTNATGV  236 (315)
T ss_dssp             ------TCSEEEECSST
T ss_pred             ------CCCEEEECccC
Confidence                  68999999754

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.41  E-value=4.8e-07  Score=77.52  Aligned_cols=104  Identities=15%  Similarity=0.220  Sum_probs=69.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      .|+++|||||+++||..+++.+...|++|++ +.+++++++.+. ++   +...   ..|.++.+..+++.+...  ..+
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~-~~~~~~~~~~~~-~~---g~~~---~~~~~~~~~~~~~~~~~~--~~~  209 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIG-TVGTAQKAQSAL-KA---GAWQ---VINYREEDLVERLKEITG--GKK  209 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEE-EESSHHHHHHHH-HH---TCSE---EEETTTSCHHHHHHHHTT--TCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEE-EeCCHHHHHHHH-Hc---CCCE---EEECCCccHHHHHHHHhC--CCC
Confidence            5899999999999999999999999999887 467776655443 23   3332   246666544444333221  126


Q ss_pred             ccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcc
Q 024338          105 VDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVG  166 (269)
Q Consensus       105 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  166 (269)
                      +|++|+|+|.  ..                        .+.+++.+  +++|+++.+++..+
T Consensus       210 ~D~vi~~~g~--~~------------------------~~~~~~~l--~~~G~iv~~g~~~~  243 (327)
T 1qor_A          210 VRVVYDSVGR--DT------------------------WERSLDCL--QRRGLMVSFGNSSG  243 (327)
T ss_dssp             EEEEEECSCG--GG------------------------HHHHHHTE--EEEEEEEECCCTTC
T ss_pred             ceEEEECCch--HH------------------------HHHHHHHh--cCCCEEEEEecCCC
Confidence            9999999981  10                        23444444  45789999987644

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.36  E-value=9.4e-07  Score=79.34  Aligned_cols=79  Identities=15%  Similarity=0.221  Sum_probs=61.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHc-CCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKA-GCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~-G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      .++++|+++|+|+ |++|+++++.|+++ |++|.+ ..|+.++.+++.+.     ..+..+.+|++|.+++.++++    
T Consensus        19 ~~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v-~~R~~~ka~~la~~-----~~~~~~~~D~~d~~~l~~~l~----   87 (467)
T 2axq_A           19 GRHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTV-ACRTLANAQALAKP-----SGSKAISLDVTDDSALDKVLA----   87 (467)
T ss_dssp             ----CEEEEEECC-STTHHHHHHHHHTSTTEEEEE-EESSHHHHHHHHGG-----GTCEEEECCTTCHHHHHHHHH----
T ss_pred             cCCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEE-EECCHHHHHHHHHh-----cCCcEEEEecCCHHHHHHHHc----
Confidence            4567889999998 99999999999998 677766 68888877766543     134567899999888777665    


Q ss_pred             hcCCccEEEEccCC
Q 024338          101 AWGTVDILINNAGI  114 (269)
Q Consensus       101 ~~~~id~li~~ag~  114 (269)
                         ++|+|||+++.
T Consensus        88 ---~~DvVIn~tp~   98 (467)
T 2axq_A           88 ---DNDVVISLIPY   98 (467)
T ss_dssp             ---TSSEEEECSCG
T ss_pred             ---CCCEEEECCch
Confidence               78999999985

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.36  E-value=6.6e-08  Score=88.28  Aligned_cols=99  Identities=24%  Similarity=0.337  Sum_probs=63.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      ++++|+++|||| ||+|+++++.|+++|++|++ +.|+.++++++.+++   +.++  +  ++.|   +.++      ..
T Consensus       361 ~l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i-~~R~~~~a~~la~~~---~~~~--~--~~~d---l~~~------~~  422 (523)
T 2o7s_A          361 PLASKTVVVIGA-GGAGKALAYGAKEKGAKVVI-ANRTYERALELAEAI---GGKA--L--SLTD---LDNY------HP  422 (523)
T ss_dssp             -----CEEEECC-SHHHHHHHHHHHHHCC-CEE-EESSHHHHHHHHHHT---TC-C--E--ETTT---TTTC--------
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHc---CCce--e--eHHH---hhhc------cc
Confidence            567899999999 59999999999999998777 589988888777665   2222  1  2222   1000      11


Q ss_pred             CCccEEEEccCCCCC-----CcccCCCHHHHHHHHHHHhHHH
Q 024338          103 GTVDILINNAGITRD-----TLLMRMKKSQWQDVIDLNLTGV  139 (269)
Q Consensus       103 ~~id~li~~ag~~~~-----~~~~~~~~~~~~~~~~~n~~~~  139 (269)
                      +.+|++|||+|....     .++.+.+.+.+...+++|+.+.
T Consensus       423 ~~~DilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~  464 (523)
T 2o7s_A          423 EDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPR  464 (523)
T ss_dssp             CCSEEEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSS
T ss_pred             cCceEEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCc
Confidence            358999999997421     3455555666677777777654

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.27  E-value=4.8e-06  Score=62.14  Aligned_cols=75  Identities=20%  Similarity=0.176  Sum_probs=57.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      +++.++|+|+ |.+|..+++.|.++|++|++ ..++++..+.+.+    .  ...++.+|.++++.++++      ...+
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~-id~~~~~~~~~~~----~--~~~~~~gd~~~~~~l~~~------~~~~   70 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLA-VDKSKEKIELLED----E--GFDAVIADPTDESFYRSL------DLEG   70 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEE-EESCHHHHHHHHH----T--TCEEEECCTTCHHHHHHS------CCTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEE-EECCHHHHHHHHH----C--CCcEEECCCCCHHHHHhC------Cccc
Confidence            4578999998 78999999999999999988 4788876655443    2  356788999998876653      2247


Q ss_pred             ccEEEEccC
Q 024338          105 VDILINNAG  113 (269)
Q Consensus       105 id~li~~ag  113 (269)
                      .|.+|.+.+
T Consensus        71 ~d~vi~~~~   79 (141)
T 3llv_A           71 VSAVLITGS   79 (141)
T ss_dssp             CSEEEECCS
T ss_pred             CCEEEEecC
Confidence            899998776

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.25  E-value=1.1e-06  Score=65.55  Aligned_cols=78  Identities=14%  Similarity=0.236  Sum_probs=55.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      +++++.++|+|+ |.+|..+++.|.+.|++|++ +.++++..+.+.    +.+  ...+.+|.++.+.++++      ..
T Consensus         3 ~~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~-~d~~~~~~~~~~----~~~--~~~~~~d~~~~~~l~~~------~~   68 (144)
T 2hmt_A            3 RIKNKQFAVIGL-GRFGGSIVKELHRMGHEVLA-VDINEEKVNAYA----SYA--THAVIANATEENELLSL------GI   68 (144)
T ss_dssp             ---CCSEEEECC-SHHHHHHHHHHHHTTCCCEE-EESCHHHHHTTT----TTC--SEEEECCTTCHHHHHTT------TG
T ss_pred             CCcCCcEEEECC-CHHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHH----HhC--CEEEEeCCCCHHHHHhc------CC
Confidence            456788999998 99999999999999999887 477766544322    222  24577899987655432      12


Q ss_pred             CCccEEEEccCC
Q 024338          103 GTVDILINNAGI  114 (269)
Q Consensus       103 ~~id~li~~ag~  114 (269)
                      .+.|++|++++.
T Consensus        69 ~~~d~vi~~~~~   80 (144)
T 2hmt_A           69 RNFEYVIVAIGA   80 (144)
T ss_dssp             GGCSEEEECCCS
T ss_pred             CCCCEEEECCCC
Confidence            478999999873

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.23  E-value=2.7e-06  Score=71.01  Aligned_cols=77  Identities=22%  Similarity=0.275  Sum_probs=57.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      .++++|+++|+|+ ||+|+++++.|++.|++|++ +.|+.++.+++.+++...+ .+.  ..|+   +++       .+ 
T Consensus       115 ~~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v-~~R~~~~~~~la~~~~~~~-~~~--~~~~---~~~-------~~-  178 (271)
T 1nyt_A          115 FIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTI-TNRTVSRAEELAKLFAHTG-SIQ--ALSM---DEL-------EG-  178 (271)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEE-ECSSHHHHHHHHHHTGGGS-SEE--ECCS---GGG-------TT-
T ss_pred             cCcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEE-EECCHHHHHHHHHHhhccC-Cee--EecH---HHh-------cc-
Confidence            3578999999998 79999999999999988877 6899888888877764322 222  2333   211       11 


Q ss_pred             cCCccEEEEccCCC
Q 024338          102 WGTVDILINNAGIT  115 (269)
Q Consensus       102 ~~~id~li~~ag~~  115 (269)
                       +.+|+||+|++..
T Consensus       179 -~~~DivVn~t~~~  191 (271)
T 1nyt_A          179 -HEFDLIINATSSG  191 (271)
T ss_dssp             -CCCSEEEECCSCG
T ss_pred             -CCCCEEEECCCCC
Confidence             5899999999864

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.22  E-value=6.9e-06  Score=70.48  Aligned_cols=150  Identities=12%  Similarity=0.092  Sum_probs=92.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-------cEEEEecCC----HHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHH
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGC-------KVLVNYARS----SKEAEEVCKEIEASGGQALTFGGDVSKEADVESMI   95 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~-------~v~i~~~r~----~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~   95 (269)
                      ..++||||+|.+|..++..|+.+|.       ++++ ++++    .++++.....+......+   ..|+....+..+++
T Consensus         6 ~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l-~Di~~~~~~~~~~g~~~dl~~~~~~~---~~~i~~~~~~~~al   81 (329)
T 1b8p_A            6 MRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQL-LEIPNEKAQKALQGVMMEIDDCAFPL---LAGMTAHADPMTAF   81 (329)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEE-ECCSCHHHHHHHHHHHHHHHTTTCTT---EEEEEEESSHHHHT
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEE-EcCCCccccccchhhHHHHhhhcccc---cCcEEEecCcHHHh
Confidence            4799999999999999999999885       5555 5777    554554455554421111   12333323333333


Q ss_pred             HHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcc--------c
Q 024338           96 KTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVG--------L  167 (269)
Q Consensus        96 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~--------~  167 (269)
                             .+.|+|||+||.....   ..+   -.+.+..|+.....+.+.+..+-  ...+++|++|.-..        .
T Consensus        82 -------~~aD~Vi~~ag~~~~~---g~~---r~dl~~~N~~i~~~i~~~i~~~~--~p~a~ii~~SNPv~~~t~~~~~~  146 (329)
T 1b8p_A           82 -------KDADVALLVGARPRGP---GME---RKDLLEANAQIFTVQGKAIDAVA--SRNIKVLVVGNPANTNAYIAMKS  146 (329)
T ss_dssp             -------TTCSEEEECCCCCCCT---TCC---HHHHHHHHHHHHHHHHHHHHHHS--CTTCEEEECSSSHHHHHHHHHHT
T ss_pred             -------CCCCEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHHhc--CCCeEEEEccCchHHHHHHHHHH
Confidence                   3789999999965321   122   23567888888666666665431  25679999987542        1


Q ss_pred             c-CCCCChhhHHhHHHHHHHHHHHHHHhc
Q 024338          168 V-GNIGQANYSAAKAGVIGLTKTVAKEYA  195 (269)
Q Consensus       168 ~-~~~~~~~Y~~sK~al~~~~~~la~e~~  195 (269)
                      . +.|..-.|+.++.--..+...++..+.
T Consensus       147 ~~~~p~~~v~g~t~Ld~~r~~~~la~~lg  175 (329)
T 1b8p_A          147 APSLPAKNFTAMLRLDHNRALSQIAAKTG  175 (329)
T ss_dssp             CTTSCGGGEEECCHHHHHHHHHHHHHHHT
T ss_pred             cCCCCHHHEEEeecHHHHHHHHHHHHHhC
Confidence            1 334444577766545556666766653

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.21  E-value=1.7e-06  Score=74.65  Aligned_cols=80  Identities=24%  Similarity=0.348  Sum_probs=57.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      .|+++||+|++|++|..+++.+...|++|++ +.+++++++.+.+++   +...   ..|.++.+++.+.+.++..  ++
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~-~~~~~~~~~~~~~~~---g~~~---~~d~~~~~~~~~~~~~~~~--~~  225 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVG-SAGSKEKVDLLKTKF---GFDD---AFNYKEESDLTAALKRCFP--NG  225 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEE-EESSHHHHHHHHHTS---CCSE---EEETTSCSCSHHHHHHHCT--TC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHc---CCce---EEecCCHHHHHHHHHHHhC--CC
Confidence            6899999999999999999999999998877 477776665443222   3332   2366654445554544432  47


Q ss_pred             ccEEEEccC
Q 024338          105 VDILINNAG  113 (269)
Q Consensus       105 id~li~~ag  113 (269)
                      +|++|+|+|
T Consensus       226 ~d~vi~~~g  234 (345)
T 2j3h_A          226 IDIYFENVG  234 (345)
T ss_dssp             EEEEEESSC
T ss_pred             CcEEEECCC
Confidence            999999997

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=98.21  E-value=1.2e-05  Score=71.93  Aligned_cols=110  Identities=16%  Similarity=0.248  Sum_probs=74.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEE--ccCC---------CHHHHH
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFG--GDVS---------KEADVE   92 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~--~Dls---------~~~~~~   92 (269)
                      -.|++|||+|++|+||..+++.+...|++++++ .+++++++.+ ++   .+....+..  .|+.         +.++++
T Consensus       219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~-~~~~~~~~~~-~~---lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~  293 (447)
T 4a0s_A          219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAV-VSSAQKEAAV-RA---LGCDLVINRAELGITDDIADDPRRVVETGR  293 (447)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEE-ESSHHHHHHH-HH---TTCCCEEEHHHHTCCTTGGGCHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEE-eCCHHHHHHH-Hh---cCCCEEEecccccccccccccccccchhhh
Confidence            368999999999999999999999999998885 5676665533 33   344322221  2332         234555


Q ss_pred             HHHHHHHHhcC-CccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcc
Q 024338           93 SMIKTAVDAWG-TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVG  166 (269)
Q Consensus        93 ~~~~~~~~~~~-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  166 (269)
                      ++.+++.+..+ ++|++|+++|.           +.               .+..++.+  +++|+++++++..+
T Consensus       294 ~~~~~v~~~~g~g~Dvvid~~G~-----------~~---------------~~~~~~~l--~~~G~iv~~G~~~~  340 (447)
T 4a0s_A          294 KLAKLVVEKAGREPDIVFEHTGR-----------VT---------------FGLSVIVA--RRGGTVVTCGSSSG  340 (447)
T ss_dssp             HHHHHHHHHHSSCCSEEEECSCH-----------HH---------------HHHHHHHS--CTTCEEEESCCTTC
T ss_pred             HHHHHHHHHhCCCceEEEECCCc-----------hH---------------HHHHHHHH--hcCCEEEEEecCCC
Confidence            66667766555 69999999982           00               13344444  56799999987654

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.18  E-value=4.3e-06  Score=71.74  Aligned_cols=103  Identities=16%  Similarity=0.229  Sum_probs=69.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      .++++|||||+|+||..+++.+...|++|++ +.+++++++.+. ++   +...   ..|.++.+..+++.+ .... .+
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~-~~~~~~~~~~~~-~~---g~~~---~~d~~~~~~~~~i~~-~~~~-~~  214 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIG-TVSTEEKAETAR-KL---GCHH---TINYSTQDFAEVVRE-ITGG-KG  214 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEE-EESSHHHHHHHH-HH---TCSE---EEETTTSCHHHHHHH-HHTT-CC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHH-Hc---CCCE---EEECCCHHHHHHHHH-HhCC-CC
Confidence            6899999999999999999999999999887 477776665443 33   3332   246666444433332 2211 36


Q ss_pred             ccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCc
Q 024338          105 VDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVV  165 (269)
Q Consensus       105 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  165 (269)
                      +|++|+|+|.  .                        ..+.+++.+  +++|+++.+++..
T Consensus       215 ~d~vi~~~g~--~------------------------~~~~~~~~l--~~~G~iv~~g~~~  247 (333)
T 1wly_A          215 VDVVYDSIGK--D------------------------TLQKSLDCL--RPRGMCAAYGHAS  247 (333)
T ss_dssp             EEEEEECSCT--T------------------------THHHHHHTE--EEEEEEEECCCTT
T ss_pred             CeEEEECCcH--H------------------------HHHHHHHhh--ccCCEEEEEecCC
Confidence            9999999984  1                        033344444  4568999987654

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=98.14  E-value=1.2e-05  Score=67.43  Aligned_cols=81  Identities=26%  Similarity=0.371  Sum_probs=59.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCc-EEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCK-VLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~-v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      .++++|+++|+|+ ||+|++++..|++.|+. +.+ ..|+.++.+++.+++......+.+...++.+   +.+.+.    
T Consensus       123 ~~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i-~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~---l~~~l~----  193 (283)
T 3jyo_A          123 PNAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQV-ADLDTSRAQALADVINNAVGREAVVGVDARG---IEDVIA----  193 (283)
T ss_dssp             TTCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEE-ECSSHHHHHHHHHHHHHHHTSCCEEEECSTT---HHHHHH----
T ss_pred             cCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEE-EECCHHHHHHHHHHHHhhcCCceEEEcCHHH---HHHHHh----
Confidence            4688999999998 79999999999999995 666 6999999998988886543222233334433   333332    


Q ss_pred             hcCCccEEEEccCC
Q 024338          101 AWGTVDILINNAGI  114 (269)
Q Consensus       101 ~~~~id~li~~ag~  114 (269)
                         ..|+|||+...
T Consensus       194 ---~~DiVInaTp~  204 (283)
T 3jyo_A          194 ---AADGVVNATPM  204 (283)
T ss_dssp             ---HSSEEEECSST
T ss_pred             ---cCCEEEECCCC
Confidence               57999999754

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.14  E-value=4.1e-06  Score=72.62  Aligned_cols=104  Identities=18%  Similarity=0.271  Sum_probs=68.8

Q ss_pred             CC--CEEEEeCCCCchHHHHHHHHHHcCC-cEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           25 EA--PVAVVTGASRGIGRAVATSLGKAGC-KVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        25 ~~--k~vlItGas~giG~~~a~~l~~~G~-~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      .|  +++||+||+|+||..+++.+...|+ +|++ +.+++++.+.+.+++   +..   ..+|.++.+ +.+.+.++.. 
T Consensus       158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~-~~~~~~~~~~~~~~~---g~~---~~~d~~~~~-~~~~~~~~~~-  228 (357)
T 2zb4_A          158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVG-ICGTHEKCILLTSEL---GFD---AAINYKKDN-VAEQLRESCP-  228 (357)
T ss_dssp             TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEE-EESCHHHHHHHHHTS---CCS---EEEETTTSC-HHHHHHHHCT-
T ss_pred             CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEE-EeCCHHHHHHHHHHc---CCc---eEEecCchH-HHHHHHHhcC-
Confidence            57  9999999999999999999999999 8877 467776655443323   332   234666533 3333333222 


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcc
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVG  166 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  166 (269)
                       +++|++|+|+|.           +               ..+.+++.+  +++|+++.++...+
T Consensus       229 -~~~d~vi~~~G~-----------~---------------~~~~~~~~l--~~~G~iv~~G~~~~  264 (357)
T 2zb4_A          229 -AGVDVYFDNVGG-----------N---------------ISDTVISQM--NENSHIILCGQISQ  264 (357)
T ss_dssp             -TCEEEEEESCCH-----------H---------------HHHHHHHTE--EEEEEEEECCCGGG
T ss_pred             -CCCCEEEECCCH-----------H---------------HHHHHHHHh--ccCcEEEEECCccc
Confidence             269999999982           0               123344544  45689999876543

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.12  E-value=7.7e-06  Score=70.79  Aligned_cols=79  Identities=22%  Similarity=0.238  Sum_probs=54.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      .|+++||+||+|++|..+++.+...|++|++ +.+++++.+ ..++   .+..   ..+|.++.+..+++.+ ... ..+
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~-~~~~~~~~~-~~~~---~ga~---~~~d~~~~~~~~~~~~-~~~-~~~  239 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILG-TAGTEEGQK-IVLQ---NGAH---EVFNHREVNYIDKIKK-YVG-EKG  239 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEE-EESSHHHHH-HHHH---TTCS---EEEETTSTTHHHHHHH-HHC-TTC
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEE-EeCChhHHH-HHHH---cCCC---EEEeCCCchHHHHHHH-HcC-CCC
Confidence            5899999999999999999999999999887 477776655 2333   3433   2246666443333222 211 126


Q ss_pred             ccEEEEccC
Q 024338          105 VDILINNAG  113 (269)
Q Consensus       105 id~li~~ag  113 (269)
                      +|++|+|+|
T Consensus       240 ~D~vi~~~G  248 (351)
T 1yb5_A          240 IDIIIEMLA  248 (351)
T ss_dssp             EEEEEESCH
T ss_pred             cEEEEECCC
Confidence            999999998

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.12  E-value=6.5e-06  Score=71.30  Aligned_cols=103  Identities=19%  Similarity=0.223  Sum_probs=68.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      .|+++||+||+|+||..+++.+...|++|++ +.+++++++.+ +++   +..   ..+|.++.+..+++.+ ... ..+
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~-~~~~~~~~~~~-~~~---g~~---~~~~~~~~~~~~~~~~-~~~-~~~  231 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLV-TAGSQKKLQMA-EKL---GAA---AGFNYKKEDFSEATLK-FTK-GAG  231 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHH-HHH---TCS---EEEETTTSCHHHHHHH-HTT-TSC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEE-EeCCHHHHHHH-HHc---CCc---EEEecCChHHHHHHHH-Hhc-CCC
Confidence            5899999999999999999999999999887 57777666544 333   333   2346665443333222 111 136


Q ss_pred             ccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCc
Q 024338          105 VDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVV  165 (269)
Q Consensus       105 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  165 (269)
                      +|++|+|+|..           .               .+..++.+  +++|+++.++...
T Consensus       232 ~d~vi~~~G~~-----------~---------------~~~~~~~l--~~~G~iv~~G~~~  264 (354)
T 2j8z_A          232 VNLILDCIGGS-----------Y---------------WEKNVNCL--ALDGRWVLYGLMG  264 (354)
T ss_dssp             EEEEEESSCGG-----------G---------------HHHHHHHE--EEEEEEEECCCTT
T ss_pred             ceEEEECCCch-----------H---------------HHHHHHhc--cCCCEEEEEeccC
Confidence            99999999831           0               23334444  4568999987654

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=98.09  E-value=1.6e-05  Score=68.47  Aligned_cols=104  Identities=15%  Similarity=0.177  Sum_probs=69.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      .++++||+|++|++|..+++.+...|++|++ +.+++++.+.+. ++   +...   ..|.++.+ +.+.+.++.. ..+
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~-~~~~~~~~~~~~-~~---ga~~---~~d~~~~~-~~~~~~~~~~-~~~  235 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIA-TAGSEDKLRRAK-AL---GADE---TVNYTHPD-WPKEVRRLTG-GKG  235 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEE-EESSHHHHHHHH-HH---TCSE---EEETTSTT-HHHHHHHHTT-TTC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHH-hc---CCCE---EEcCCccc-HHHHHHHHhC-CCC
Confidence            5899999999999999999999999999887 477776665442 33   3332   24666543 2222222221 137


Q ss_pred             ccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcc
Q 024338          105 VDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVG  166 (269)
Q Consensus       105 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  166 (269)
                      +|++|+++| . ..                        .+.+++.+  ++.|+++.+++..+
T Consensus       236 ~d~vi~~~g-~-~~------------------------~~~~~~~l--~~~G~~v~~g~~~~  269 (343)
T 2eih_A          236 ADKVVDHTG-A-LY------------------------FEGVIKAT--ANGGRIAIAGASSG  269 (343)
T ss_dssp             EEEEEESSC-S-SS------------------------HHHHHHHE--EEEEEEEESSCCCS
T ss_pred             ceEEEECCC-H-HH------------------------HHHHHHhh--ccCCEEEEEecCCC
Confidence            999999998 2 10                        23444555  45689999987654

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.08  E-value=8.8e-06  Score=69.86  Aligned_cols=104  Identities=18%  Similarity=0.282  Sum_probs=69.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      -.|+++||+|++|+||..+++.+...|++|++ +.+++++.+.+.+++   +...   ..|.++.+..+. +.++.  .+
T Consensus       148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~-~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~-~~~~~--~~  217 (336)
T 4b7c_A          148 KNGETVVISGAAGAVGSVAGQIARLKGCRVVG-IAGGAEKCRFLVEEL---GFDG---AIDYKNEDLAAG-LKREC--PK  217 (336)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEE-EESSHHHHHHHHHTT---CCSE---EEETTTSCHHHH-HHHHC--TT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHc---CCCE---EEECCCHHHHHH-HHHhc--CC
Confidence            36899999999999999999999999999887 477777665543433   3322   235555332222 22222  24


Q ss_pred             CccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCc
Q 024338          104 TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVV  165 (269)
Q Consensus       104 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  165 (269)
                      ++|++|+|+|..                          ..+.+++.+  +++|+++.++...
T Consensus       218 ~~d~vi~~~g~~--------------------------~~~~~~~~l--~~~G~iv~~G~~~  251 (336)
T 4b7c_A          218 GIDVFFDNVGGE--------------------------ILDTVLTRI--AFKARIVLCGAIS  251 (336)
T ss_dssp             CEEEEEESSCHH--------------------------HHHHHHTTE--EEEEEEEECCCGG
T ss_pred             CceEEEECCCcc--------------------------hHHHHHHHH--hhCCEEEEEeecc
Confidence            799999999820                          123334444  4568999988765

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=98.04  E-value=8.7e-06  Score=70.82  Aligned_cols=99  Identities=17%  Similarity=0.233  Sum_probs=65.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCH---HHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSS---KEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~---~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      ++|+++||+|+ |++|..+++.+...|++|+++ .+++   ++.+ +.+++   +..  .+  | ++  ++.+.+.+ ..
T Consensus       179 ~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~-~~~~~---ga~--~v--~-~~--~~~~~~~~-~~  244 (366)
T 2cdc_A          179 LNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMA-NRREPTEVEQT-VIEET---KTN--YY--N-SS--NGYDKLKD-SV  244 (366)
T ss_dssp             STTCEEEEESC-HHHHHHHHHHHHHHTCEEEEE-ESSCCCHHHHH-HHHHH---TCE--EE--E-CT--TCSHHHHH-HH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEE-eCCccchHHHH-HHHHh---CCc--ee--c-hH--HHHHHHHH-hC
Confidence            34999999999 999999999999999988885 5555   4443 33333   332  22  5 54  22222333 22


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHH-HHHHHHHHhCCCCeEEEEcCCc
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCT-QAAAKIMMKKKKGRIINIASVV  165 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~-~~~~~~l~~~~~~~iv~isS~~  165 (269)
                        +++|++|+++|...                         .+ +.+++.+  +++|++++++...
T Consensus       245 --~~~d~vid~~g~~~-------------------------~~~~~~~~~l--~~~G~iv~~g~~~  281 (366)
T 2cdc_A          245 --GKFDVIIDATGADV-------------------------NILGNVIPLL--GRNGVLGLFGFST  281 (366)
T ss_dssp             --CCEEEEEECCCCCT-------------------------HHHHHHGGGE--EEEEEEEECSCCC
T ss_pred             --CCCCEEEECCCChH-------------------------HHHHHHHHHH--hcCCEEEEEecCC
Confidence              58999999998421                         12 4445555  4568999987653

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=98.01  E-value=5e-05  Score=64.44  Aligned_cols=82  Identities=17%  Similarity=0.299  Sum_probs=59.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC-cEEEEecCC---HHHHHHHHHHHHHc-CCcEEEEEccCCCHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGC-KVLVNYARS---SKEAEEVCKEIEAS-GGQALTFGGDVSKEADVESMIK   96 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~-~v~i~~~r~---~~~~~~~~~~l~~~-~~~~~~~~~Dls~~~~~~~~~~   96 (269)
                      .++++|++||+|+ ||.|++++..|++.|+ ++.+ ..|+   .++.+++.+++... +..+.  ..++.+.+...+.+.
T Consensus       144 ~~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v-~nRt~~~~~~a~~la~~~~~~~~~~v~--~~~~~~l~~~~~~l~  219 (312)
T 3t4e_A          144 FDMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKL-FNRKDDFFEKAVAFAKRVNENTDCVVT--VTDLADQHAFTEALA  219 (312)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEE-EECSSTHHHHHHHHHHHHHHHSSCEEE--EEETTCHHHHHHHHH
T ss_pred             CCcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEE-EECCCchHHHHHHHHHHhhhccCcceE--EechHhhhhhHhhcc
Confidence            5678999999998 8999999999999998 5666 6899   88888888887654 22333  335555433333232


Q ss_pred             HHHHhcCCccEEEEccCC
Q 024338           97 TAVDAWGTVDILINNAGI  114 (269)
Q Consensus        97 ~~~~~~~~id~li~~ag~  114 (269)
                             ..|+|||+...
T Consensus       220 -------~~DiIINaTp~  230 (312)
T 3t4e_A          220 -------SADILTNGTKV  230 (312)
T ss_dssp             -------HCSEEEECSST
T ss_pred             -------CceEEEECCcC
Confidence                   57999998754

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.99  E-value=1.6e-05  Score=68.27  Aligned_cols=103  Identities=19%  Similarity=0.293  Sum_probs=68.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc-
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW-  102 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~-  102 (269)
                      -.|+++||+||+|++|..+++.+...|++|+++ .+++++++ +.+++   +...   ..|.++.+..    +++.+.. 
T Consensus       147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~-~~~~~~~~-~~~~~---ga~~---~~~~~~~~~~----~~~~~~~~  214 (334)
T 3qwb_A          147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAV-ASTDEKLK-IAKEY---GAEY---LINASKEDIL----RQVLKFTN  214 (334)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEE-ESSHHHHH-HHHHT---TCSE---EEETTTSCHH----HHHHHHTT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE-eCCHHHHH-HHHHc---CCcE---EEeCCCchHH----HHHHHHhC
Confidence            368999999999999999999999999998874 67776665 33333   4332   2344443322    2233322 


Q ss_pred             -CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcc
Q 024338          103 -GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVG  166 (269)
Q Consensus       103 -~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  166 (269)
                       .++|++|+|+|.  .                        ..+.+++.+  +++|+++.++...+
T Consensus       215 ~~g~D~vid~~g~--~------------------------~~~~~~~~l--~~~G~iv~~G~~~~  251 (334)
T 3qwb_A          215 GKGVDASFDSVGK--D------------------------TFEISLAAL--KRKGVFVSFGNASG  251 (334)
T ss_dssp             TSCEEEEEECCGG--G------------------------GHHHHHHHE--EEEEEEEECCCTTC
T ss_pred             CCCceEEEECCCh--H------------------------HHHHHHHHh--ccCCEEEEEcCCCC
Confidence             269999999984  1                        123344545  56789999886543

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=97.98  E-value=0.00011  Score=62.78  Aligned_cols=116  Identities=20%  Similarity=0.241  Sum_probs=71.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcC--CcEEEEecCCHHHHHHHHHHHHHcCC--cEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAG--CKVLVNYARSSKEAEEVCKEIEASGG--QALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G--~~v~i~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      ..++||||+|.+|..++..|+++|  .++++ .+++++  +....++.....  ++..    +++..+..++++      
T Consensus         9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l-~Di~~~--~~~~~dL~~~~~~~~v~~----~~~t~d~~~al~------   75 (326)
T 1smk_A            9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHL-YDVVNA--PGVTADISHMDTGAVVRG----FLGQQQLEAALT------   75 (326)
T ss_dssp             EEEEEETTTSTTHHHHHHHHHHCTTEEEEEE-EESSSH--HHHHHHHHTSCSSCEEEE----EESHHHHHHHHT------
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEE-EeCCCc--HhHHHHhhcccccceEEE----EeCCCCHHHHcC------
Confidence            469999999999999999999998  67766 465554  222333433221  2222    223344444443      


Q ss_pred             CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCc
Q 024338          103 GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVV  165 (269)
Q Consensus       103 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  165 (269)
                       +.|++|+++|......   .+.   ...+..|+.....+.+.+.+.   ...+.++++|...
T Consensus        76 -gaDvVi~~ag~~~~~g---~~r---~dl~~~N~~~~~~i~~~i~~~---~p~~~viv~SNPv  128 (326)
T 1smk_A           76 -GMDLIIVPAGVPRKPG---MTR---DDLFKINAGIVKTLCEGIAKC---CPRAIVNLISNPV  128 (326)
T ss_dssp             -TCSEEEECCCCCCCSS---CCC---SHHHHHHHHHHHHHHHHHHHH---CTTSEEEECCSSH
T ss_pred             -CCCEEEEcCCcCCCCC---CCH---HHHHHHHHHHHHHHHHHHHhh---CCCeEEEEECCch
Confidence             7999999999653221   111   245788888877666666543   3445555554433

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.97  E-value=5.4e-05  Score=67.79  Aligned_cols=110  Identities=21%  Similarity=0.279  Sum_probs=75.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEc--c--------CCCHHHHHH
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGG--D--------VSKEADVES   93 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~--D--------ls~~~~~~~   93 (269)
                      -.|++|||+|++|++|...++.+...|++++++ .+++++++.+ +++   +....+-..  |        .++.+++++
T Consensus       227 ~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~-~~~~~~~~~~-~~l---Ga~~vi~~~~~d~~~~~~~~~~~~~~~~~  301 (456)
T 3krt_A          227 KQGDNVLIWGASGGLGSYATQFALAGGANPICV-VSSPQKAEIC-RAM---GAEAIIDRNAEGYRFWKDENTQDPKEWKR  301 (456)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEE-ESSHHHHHHH-HHH---TCCEEEETTTTTCCSEEETTEECHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEE-ECCHHHHHHH-Hhh---CCcEEEecCcCcccccccccccchHHHHH
Confidence            368999999999999999999999999998885 5676665533 333   443322211  2        245667777


Q ss_pred             HHHHHHHhcC--CccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcc
Q 024338           94 MIKTAVDAWG--TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVG  166 (269)
Q Consensus        94 ~~~~~~~~~~--~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  166 (269)
                      +.+++.+..+  ++|++|.++|.           +               ..+..+..+  +++|+++.+++..+
T Consensus       302 ~~~~i~~~t~g~g~Dvvid~~G~-----------~---------------~~~~~~~~l--~~~G~iv~~G~~~~  348 (456)
T 3krt_A          302 FGKRIRELTGGEDIDIVFEHPGR-----------E---------------TFGASVFVT--RKGGTITTCASTSG  348 (456)
T ss_dssp             HHHHHHHHHTSCCEEEEEECSCH-----------H---------------HHHHHHHHE--EEEEEEEESCCTTC
T ss_pred             HHHHHHHHhCCCCCcEEEEcCCc-----------h---------------hHHHHHHHh--hCCcEEEEEecCCC
Confidence            7778777654  79999999982           0               123334444  56789999876543

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=97.97  E-value=7.6e-05  Score=56.38  Aligned_cols=78  Identities=13%  Similarity=0.176  Sum_probs=57.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCC-HHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARS-SKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~-~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      .++.++|+|+ |.+|..+++.|.+.|+.|+++ .++ ++..+.+.+..   ...+.++.+|.++.+.++++      ...
T Consensus         2 ~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vi-d~~~~~~~~~~~~~~---~~~~~~i~gd~~~~~~l~~a------~i~   70 (153)
T 1id1_A            2 RKDHFIVCGH-SILAINTILQLNQRGQNVTVI-SNLPEDDIKQLEQRL---GDNADVIPGDSNDSSVLKKA------GID   70 (153)
T ss_dssp             CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEE-ECCCHHHHHHHHHHH---CTTCEEEESCTTSHHHHHHH------TTT
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHCCCCEEEE-ECCChHHHHHHHHhh---cCCCeEEEcCCCCHHHHHHc------Chh
Confidence            3567889986 999999999999999999985 665 45554444332   23467889999998866553      123


Q ss_pred             CccEEEEccC
Q 024338          104 TVDILINNAG  113 (269)
Q Consensus       104 ~id~li~~ag  113 (269)
                      +.|.+|.+.+
T Consensus        71 ~ad~vi~~~~   80 (153)
T 1id1_A           71 RCRAILALSD   80 (153)
T ss_dssp             TCSEEEECSS
T ss_pred             hCCEEEEecC
Confidence            7899988775

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.94  E-value=7.1e-05  Score=62.36  Aligned_cols=77  Identities=17%  Similarity=0.217  Sum_probs=57.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      .++++|+++|+|+ ||+|++++..|++.|++|++ ..|+.++.+++.+++...+ .+..  .|+   +++.       + 
T Consensus       115 ~~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v-~~R~~~~a~~l~~~~~~~~-~~~~--~~~---~~~~-------~-  178 (272)
T 1p77_A          115 WLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVL-ANRTFSKTKELAERFQPYG-NIQA--VSM---DSIP-------L-  178 (272)
T ss_dssp             CCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEE-EESSHHHHHHHHHHHGGGS-CEEE--EEG---GGCC-------C-
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHccccC-CeEE--eeH---HHhc-------c-
Confidence            3678999999998 79999999999999988877 6899988888887775322 2322  232   1110       1 


Q ss_pred             cCCccEEEEccCCC
Q 024338          102 WGTVDILINNAGIT  115 (269)
Q Consensus       102 ~~~id~li~~ag~~  115 (269)
                       +..|+||++++..
T Consensus       179 -~~~DivIn~t~~~  191 (272)
T 1p77_A          179 -QTYDLVINATSAG  191 (272)
T ss_dssp             -SCCSEEEECCCC-
T ss_pred             -CCCCEEEECCCCC
Confidence             4799999999864

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.90  E-value=6.8e-05  Score=65.50  Aligned_cols=106  Identities=22%  Similarity=0.235  Sum_probs=70.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      .+++++++|+|+ |++|..+++.+...|++|++ .++++++++.+.+.+   +..+   ..|.++.+++.+++.      
T Consensus       165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~-~d~~~~~l~~~~~~~---g~~~---~~~~~~~~~l~~~l~------  230 (377)
T 2vhw_A          165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTV-LDINIDKLRQLDAEF---CGRI---HTRYSSAYELEGAVK------  230 (377)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHT---TTSS---EEEECCHHHHHHHHH------
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEE-EeCCHHHHHHHHHhc---CCee---EeccCCHHHHHHHHc------
Confidence            578999999999 99999999999999998877 578887766554333   2322   223445555555443      


Q ss_pred             CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Q 024338          103 GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASV  164 (269)
Q Consensus       103 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~  164 (269)
                       ..|++|++++.....    .+               ..+.+..++.|  ++++.+|++++.
T Consensus       231 -~aDvVi~~~~~p~~~----t~---------------~li~~~~l~~m--k~g~~iV~va~~  270 (377)
T 2vhw_A          231 -RADLVIGAVLVPGAK----AP---------------KLVSNSLVAHM--KPGAVLVDIAID  270 (377)
T ss_dssp             -HCSEEEECCCCTTSC----CC---------------CCBCHHHHTTS--CTTCEEEEGGGG
T ss_pred             -CCCEEEECCCcCCCC----Cc---------------ceecHHHHhcC--CCCcEEEEEecC
Confidence             689999998754311    10               01123344445  467899999854

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.89  E-value=0.0001  Score=64.03  Aligned_cols=78  Identities=17%  Similarity=0.202  Sum_probs=55.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      .+++++++|+|+ |++|+.+++.+...|++|++ ..|++++++.+.+...   ..+.   .+..+.+++.+.+.      
T Consensus       164 ~l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v-~dr~~~r~~~~~~~~~---~~~~---~~~~~~~~~~~~~~------  229 (361)
T 1pjc_A          164 GVKPGKVVILGG-GVVGTEAAKMAVGLGAQVQI-FDINVERLSYLETLFG---SRVE---LLYSNSAEIETAVA------  229 (361)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHG---GGSE---EEECCHHHHHHHHH------
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEE-EeCCHHHHHHHHHhhC---ceeE---eeeCCHHHHHHHHc------
Confidence            367799999999 99999999999999998777 5888887766654432   1221   12234444443332      


Q ss_pred             CCccEEEEccCCC
Q 024338          103 GTVDILINNAGIT  115 (269)
Q Consensus       103 ~~id~li~~ag~~  115 (269)
                       ..|++|++++..
T Consensus       230 -~~DvVI~~~~~~  241 (361)
T 1pjc_A          230 -EADLLIGAVLVP  241 (361)
T ss_dssp             -TCSEEEECCCCT
T ss_pred             -CCCEEEECCCcC
Confidence             789999999864

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=97.88  E-value=3.5e-05  Score=66.46  Aligned_cols=80  Identities=18%  Similarity=0.246  Sum_probs=54.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHc-CCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKA-GCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~-G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      .++++||+|+++++|..+++.+... |++|++ +.+++++.+.+ +++   +...   ..|.++.+..++ +.++... +
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~-~~~~~~~~~~~-~~~---g~~~---~~~~~~~~~~~~-~~~~~~~-~  239 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIG-VDVREEAVEAA-KRA---GADY---VINASMQDPLAE-IRRITES-K  239 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEE-EESSHHHHHHH-HHH---TCSE---EEETTTSCHHHH-HHHHTTT-S
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEE-EcCCHHHHHHH-HHh---CCCE---EecCCCccHHHH-HHHHhcC-C
Confidence            6899999999999999999999999 999877 46777666543 333   3332   235555333222 2222211 4


Q ss_pred             CccEEEEccCC
Q 024338          104 TVDILINNAGI  114 (269)
Q Consensus       104 ~id~li~~ag~  114 (269)
                      ++|++|+|+|.
T Consensus       240 ~~d~vi~~~g~  250 (347)
T 1jvb_A          240 GVDAVIDLNNS  250 (347)
T ss_dssp             CEEEEEESCCC
T ss_pred             CceEEEECCCC
Confidence            89999999983

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.86  E-value=0.00012  Score=63.13  Aligned_cols=103  Identities=16%  Similarity=0.193  Sum_probs=66.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTV  105 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i  105 (269)
                      ++++||+||+|++|..+++.+...|++|+++ .+++++.+.+ +++   +...   ..|..+.+ +.+.+.++... .++
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~-~~~~~~~~~~-~~~---Ga~~---~~~~~~~~-~~~~v~~~~~~-~g~  234 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVT-VRRDEQIALL-KDI---GAAH---VLNEKAPD-FEATLREVMKA-EQP  234 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEE-ESCGGGHHHH-HHH---TCSE---EEETTSTT-HHHHHHHHHHH-HCC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE-eCCHHHHHHH-HHc---CCCE---EEECCcHH-HHHHHHHHhcC-CCC
Confidence            4899999999999999999999999998885 6666655433 333   4332   22444433 33323333221 279


Q ss_pred             cEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcc
Q 024338          106 DILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVG  166 (269)
Q Consensus       106 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  166 (269)
                      |++|+++|..           .               .+.+++.+  +++|+++.+++..+
T Consensus       235 D~vid~~g~~-----------~---------------~~~~~~~l--~~~G~iv~~G~~~~  267 (349)
T 3pi7_A          235 RIFLDAVTGP-----------L---------------ASAIFNAM--PKRARWIIYGRLDP  267 (349)
T ss_dssp             CEEEESSCHH-----------H---------------HHHHHHHS--CTTCEEEECCCSCC
T ss_pred             cEEEECCCCh-----------h---------------HHHHHhhh--cCCCEEEEEeccCC
Confidence            9999999831           0               12334544  56799999986544

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=97.85  E-value=6.8e-05  Score=55.32  Aligned_cols=75  Identities=23%  Similarity=0.381  Sum_probs=54.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTV  105 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i  105 (269)
                      ++.++|+|+ |.+|..+++.|.+.|++|++ +.++++..+++.+..     .+.++..|.++.+.+.+.      ...+.
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~-~d~~~~~~~~~~~~~-----~~~~~~~d~~~~~~l~~~------~~~~~   70 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVL-IDIDKDICKKASAEI-----DALVINGDCTKIKTLEDA------GIEDA   70 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHC-----SSEEEESCTTSHHHHHHT------TTTTC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEE-EECCHHHHHHHHHhc-----CcEEEEcCCCCHHHHHHc------CcccC
Confidence            357899987 99999999999999999888 477776665443321     234577899887654321      12478


Q ss_pred             cEEEEccC
Q 024338          106 DILINNAG  113 (269)
Q Consensus       106 d~li~~ag  113 (269)
                      |++|.+.+
T Consensus        71 d~vi~~~~   78 (140)
T 1lss_A           71 DMYIAVTG   78 (140)
T ss_dssp             SEEEECCS
T ss_pred             CEEEEeeC
Confidence            99999874

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=97.83  E-value=4.2e-05  Score=66.12  Aligned_cols=103  Identities=23%  Similarity=0.298  Sum_probs=68.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      .|+++||+||+|++|..+++.+...|++|++ +.+++++.+.+. ++   +...   ..|.++.+..+. +.++.  .++
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~-~~~~~~~~~~~~-~l---Ga~~---~~~~~~~~~~~~-~~~~~--~~g  235 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYA-TAGSTGKCEACE-RL---GAKR---GINYRSEDFAAV-IKAET--GQG  235 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEE-EESSHHHHHHHH-HH---TCSE---EEETTTSCHHHH-HHHHH--SSC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEE-EeCCHHHHHHHH-hc---CCCE---EEeCCchHHHHH-HHHHh--CCC
Confidence            6899999999999999999999999999887 477777665433 33   3332   235554333333 33332  347


Q ss_pred             ccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcc
Q 024338          105 VDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVG  166 (269)
Q Consensus       105 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  166 (269)
                      +|++|+|+|..                          ..+..++.+  +++|+++.+++..+
T Consensus       236 ~Dvvid~~g~~--------------------------~~~~~~~~l--~~~G~iv~~g~~~~  269 (353)
T 4dup_A          236 VDIILDMIGAA--------------------------YFERNIASL--AKDGCLSIIAFLGG  269 (353)
T ss_dssp             EEEEEESCCGG--------------------------GHHHHHHTE--EEEEEEEECCCTTC
T ss_pred             ceEEEECCCHH--------------------------HHHHHHHHh--ccCCEEEEEEecCC
Confidence            99999999831                          022334444  45789999886544

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=97.82  E-value=9.8e-05  Score=62.81  Aligned_cols=146  Identities=21%  Similarity=0.210  Sum_probs=81.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC-cEEEEecC--CHHHHHHHHHHHHHc----CCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGC-KVLVNYAR--SSKEAEEVCKEIEAS----GGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~-~v~i~~~r--~~~~~~~~~~~l~~~----~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      .++||||+|.+|..++..|+.+|. .-+.+.++  +++.++.....+...    +.++.+...|    +++.+       
T Consensus         2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l~~-------   70 (313)
T 1hye_A            2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES----DENLR-------   70 (313)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE----TTCGG-------
T ss_pred             EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC----cchHH-------
Confidence            589999999999999999998884 22343566  554444333333221    1122222111    11122       


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccc--------cCCCC
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGL--------VGNIG  172 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~--------~~~~~  172 (269)
                      .+.+.|+|||+||.....   ..+   -...+..|+.....+.+++...    .+..++++|.....        .+.|.
T Consensus        71 al~gaD~Vi~~Ag~~~~~---g~~---r~dl~~~N~~i~~~i~~~i~~~----~~~~vlv~SNPv~~~t~~~~k~~~~p~  140 (313)
T 1hye_A           71 IIDESDVVIITSGVPRKE---GMS---RMDLAKTNAKIVGKYAKKIAEI----CDTKIFVITNPVDVMTYKALVDSKFER  140 (313)
T ss_dssp             GGTTCSEEEECCSCCCCT---TCC---HHHHHHHHHHHHHHHHHHHHHH----CCCEEEECSSSHHHHHHHHHHHHCCCT
T ss_pred             HhCCCCEEEECCCCCCCC---CCc---HHHHHHHHHHHHHHHHHHHHHh----CCeEEEEecCcHHHHHHHHHHhhCcCh
Confidence            234899999999964321   122   2456889999877777666553    34455555554322        23444


Q ss_pred             ChhhHH-hHHHHHHHHHHHHHHh
Q 024338          173 QANYSA-AKAGVIGLTKTVAKEY  194 (269)
Q Consensus       173 ~~~Y~~-sK~al~~~~~~la~e~  194 (269)
                      .-.++. +..-...+...++..+
T Consensus       141 ~rviG~gt~LD~~r~~~~la~~l  163 (313)
T 1hye_A          141 NQVFGLGTHLDSLRFKVAIAKFF  163 (313)
T ss_dssp             TSEEECTTHHHHHHHHHHHHHHH
T ss_pred             hcEEEeCccHHHHHHHHHHHHHh
Confidence            444555 3333444555566555

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=97.80  E-value=0.00024  Score=60.06  Aligned_cols=112  Identities=12%  Similarity=0.089  Sum_probs=66.4

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC--cEEEEecC--CHHHHHHHHHHHHHc---CCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGC--KVLVNYAR--SSKEAEEVCKEIEAS---GGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~--~v~i~~~r--~~~~~~~~~~~l~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      .++||||+|.+|..++..|+.+|.  ++.+ .++  ++++++....++...   ..++.+.. |  +    .+       
T Consensus         2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L-~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~----~~-------   66 (303)
T 1o6z_A            2 KVSVVGAAGTVGAAAGYNIALRDIADEVVF-VDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--G----YE-------   66 (303)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEE-ECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--C----GG-------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEE-EcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--C----HH-------
Confidence            589999999999999999998885  3444 577  665554434444332   22233222 2  1    11       


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcC
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIAS  163 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS  163 (269)
                      .+.+.|++||+||.....   ..+.   ...+..|+.....+.+.+..+   ...+.++++|.
T Consensus        67 a~~~aDvVi~~ag~~~~~---g~~r---~dl~~~N~~i~~~i~~~i~~~---~p~~~viv~SN  120 (303)
T 1o6z_A           67 DTAGSDVVVITAGIPRQP---GQTR---IDLAGDNAPIMEDIQSSLDEH---NDDYISLTTSN  120 (303)
T ss_dssp             GGTTCSEEEECCCCCCCT---TCCH---HHHHHHHHHHHHHHHHHHHTT---CSCCEEEECCS
T ss_pred             HhCCCCEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHHH---CCCcEEEEeCC
Confidence            123799999999964321   1232   345788888855555555431   23445555443

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.79  E-value=4.1e-05  Score=64.63  Aligned_cols=78  Identities=22%  Similarity=0.267  Sum_probs=56.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC-cEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGC-KVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~-~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      .++++|+++|+|+ ||+|++++..|++.|+ +|.+ ..|+.++.+++.+++......  .     .+.++       +.+
T Consensus       137 ~~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v-~nR~~~ka~~la~~~~~~~~~--~-----~~~~~-------~~~  200 (297)
T 2egg_A          137 ITLDGKRILVIGA-GGGARGIYFSLLSTAAERIDM-ANRTVEKAERLVREGDERRSA--Y-----FSLAE-------AET  200 (297)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEE-ECSSHHHHHHHHHHSCSSSCC--E-----ECHHH-------HHH
T ss_pred             CCCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEE-EeCCHHHHHHHHHHhhhccCc--e-----eeHHH-------HHh
Confidence            3578999999998 7999999999999998 6666 699988888877665221111  1     12222       233


Q ss_pred             hcCCccEEEEccCCC
Q 024338          101 AWGTVDILINNAGIT  115 (269)
Q Consensus       101 ~~~~id~li~~ag~~  115 (269)
                      .....|+||++.+..
T Consensus       201 ~~~~aDivIn~t~~~  215 (297)
T 2egg_A          201 RLAEYDIIINTTSVG  215 (297)
T ss_dssp             TGGGCSEEEECSCTT
T ss_pred             hhccCCEEEECCCCC
Confidence            334789999999864

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.79  E-value=0.00012  Score=62.96  Aligned_cols=101  Identities=19%  Similarity=0.209  Sum_probs=67.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      .|+++||+|+ |++|..+++.+...|++|++ +.+++++.+.+ ++   .+...   ..|.++.+ +.+.+.++.   ++
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~-~~~~~~~~~~~-~~---lGa~~---~~d~~~~~-~~~~~~~~~---~~  230 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVA-VDIGDEKLELA-KE---LGADL---VVNPLKED-AAKFMKEKV---GG  230 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEE-ECSCHHHHHHH-HH---TTCSE---EECTTTSC-HHHHHHHHH---SS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEE-EeCCHHHHHHH-HH---CCCCE---EecCCCcc-HHHHHHHHh---CC
Confidence            5899999999 88999999999999998877 57777666533 22   34332   24666532 333233332   58


Q ss_pred             ccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCc
Q 024338          105 VDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVV  165 (269)
Q Consensus       105 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  165 (269)
                      +|++|+++|..          +               ..+..++.+  ++.|+++.+++..
T Consensus       231 ~d~vid~~g~~----------~---------------~~~~~~~~l--~~~G~~v~~g~~~  264 (339)
T 1rjw_A          231 VHAAVVTAVSK----------P---------------AFQSAYNSI--RRGGACVLVGLPP  264 (339)
T ss_dssp             EEEEEESSCCH----------H---------------HHHHHHHHE--EEEEEEEECCCCS
T ss_pred             CCEEEECCCCH----------H---------------HHHHHHHHh--hcCCEEEEecccC
Confidence            99999999831          0               134445555  4568999987654

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.74  E-value=4.1e-05  Score=65.36  Aligned_cols=102  Identities=15%  Similarity=0.242  Sum_probs=67.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc--
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW--  102 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~--  102 (269)
                      .|+++||+||+|++|..+++.+...|++|+++ .+++++++.+ .++   +...   ..|.++.+..+    ++.+..  
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~-~~~~~~~~~~-~~~---Ga~~---~~~~~~~~~~~----~~~~~~~~  207 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGT-VSSPEKAAHA-KAL---GAWE---TIDYSHEDVAK----RVLELTDG  207 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEE-ESSHHHHHHH-HHH---TCSE---EEETTTSCHHH----HHHHHTTT
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEE-eCCHHHHHHH-HHc---CCCE---EEeCCCccHHH----HHHHHhCC
Confidence            68999999999999999999999999998874 6777666533 333   3332   23444433222    333322  


Q ss_pred             CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcc
Q 024338          103 GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVG  166 (269)
Q Consensus       103 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  166 (269)
                      .++|++|+|+|..                          ..+..++.+  +++|+++.++...+
T Consensus       208 ~g~Dvvid~~g~~--------------------------~~~~~~~~l--~~~G~iv~~g~~~~  243 (325)
T 3jyn_A          208 KKCPVVYDGVGQD--------------------------TWLTSLDSV--APRGLVVSFGNASG  243 (325)
T ss_dssp             CCEEEEEESSCGG--------------------------GHHHHHTTE--EEEEEEEECCCTTC
T ss_pred             CCceEEEECCChH--------------------------HHHHHHHHh--cCCCEEEEEecCCC
Confidence            2699999999841                          122334444  46789999987654

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.69  E-value=0.00011  Score=63.85  Aligned_cols=99  Identities=20%  Similarity=0.241  Sum_probs=66.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      .|+++||+|+ |++|..+++.+...|++|+++ .+++++.+.+.++   .+.+.   ..|..+.+.++       +..++
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~~~---lGa~~---v~~~~~~~~~~-------~~~~~  251 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVI-STSPSKKEEALKN---FGADS---FLVSRDQEQMQ-------AAAGT  251 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEE-ESCGGGHHHHHHT---SCCSE---EEETTCHHHHH-------HTTTC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEE-eCCHHHHHHHHHh---cCCce---EEeccCHHHHH-------HhhCC
Confidence            6899999996 999999999999999998774 6666655443322   24332   23555644332       22358


Q ss_pred             ccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCc
Q 024338          105 VDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVV  165 (269)
Q Consensus       105 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  165 (269)
                      +|++|+++|....                         ++..++.+  ++.|+++++++..
T Consensus       252 ~D~vid~~g~~~~-------------------------~~~~~~~l--~~~G~iv~~g~~~  285 (366)
T 1yqd_A          252 LDGIIDTVSAVHP-------------------------LLPLFGLL--KSHGKLILVGAPE  285 (366)
T ss_dssp             EEEEEECCSSCCC-------------------------SHHHHHHE--EEEEEEEECCCCS
T ss_pred             CCEEEECCCcHHH-------------------------HHHHHHHH--hcCCEEEEEccCC
Confidence            9999999985321                         22344555  4568999998754

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.67  E-value=0.0007  Score=58.53  Aligned_cols=108  Identities=17%  Similarity=0.133  Sum_probs=70.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCc-EEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCK-VLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~-v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      -.|+++||+|+ |++|...++.....|++ |++ +.+++++.+ +++++   ...+..+..|-.+.+++.+.+.++.. -
T Consensus       178 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~-~~~~~~~~~-~a~~l---~~~~~~~~~~~~~~~~~~~~v~~~t~-g  250 (363)
T 3m6i_A          178 RLGDPVLICGA-GPIGLITMLCAKAAGACPLVI-TDIDEGRLK-FAKEI---CPEVVTHKVERLSAEESAKKIVESFG-G  250 (363)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHHTTCCSEEE-EESCHHHHH-HHHHH---CTTCEEEECCSCCHHHHHHHHHHHTS-S
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEE-ECCCHHHHH-HHHHh---chhcccccccccchHHHHHHHHHHhC-C
Confidence            36899999998 99999999988889998 665 567776665 34444   23444445555555555444433321 1


Q ss_pred             CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCc
Q 024338          103 GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVV  165 (269)
Q Consensus       103 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  165 (269)
                      .++|++|.++|..          .               ..+..++.+  +++|+++.++...
T Consensus       251 ~g~Dvvid~~g~~----------~---------------~~~~~~~~l--~~~G~iv~~G~~~  286 (363)
T 3m6i_A          251 IEPAVALECTGVE----------S---------------SIAAAIWAV--KFGGKVFVIGVGK  286 (363)
T ss_dssp             CCCSEEEECSCCH----------H---------------HHHHHHHHS--CTTCEEEECCCCC
T ss_pred             CCCCEEEECCCCh----------H---------------HHHHHHHHh--cCCCEEEEEccCC
Confidence            2699999999831          0               133344444  5679999987643

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.64  E-value=7.7e-05  Score=64.08  Aligned_cols=79  Identities=22%  Similarity=0.227  Sum_probs=53.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc-
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW-  102 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~-  102 (269)
                      -.|+++||+|+++++|..+++.+...|++|+++ .+++++.+.+ .++   +.+..   .|.++.+..+    ++.+.. 
T Consensus       143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~-~~~~~~~~~~-~~l---ga~~~---~~~~~~~~~~----~~~~~~~  210 (340)
T 3gms_A          143 QRNDVLLVNACGSAIGHLFAQLSQILNFRLIAV-TRNNKHTEEL-LRL---GAAYV---IDTSTAPLYE----TVMELTN  210 (340)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEE-ESSSTTHHHH-HHH---TCSEE---EETTTSCHHH----HHHHHTT
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEE-eCCHHHHHHH-HhC---CCcEE---EeCCcccHHH----HHHHHhC
Confidence            368999999999999999999999999998885 5666555433 233   43322   2444433222    222222 


Q ss_pred             -CCccEEEEccCC
Q 024338          103 -GTVDILINNAGI  114 (269)
Q Consensus       103 -~~id~li~~ag~  114 (269)
                       .++|++|+|+|.
T Consensus       211 ~~g~Dvvid~~g~  223 (340)
T 3gms_A          211 GIGADAAIDSIGG  223 (340)
T ss_dssp             TSCEEEEEESSCH
T ss_pred             CCCCcEEEECCCC
Confidence             269999999983

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.62  E-value=0.00014  Score=63.19  Aligned_cols=71  Identities=23%  Similarity=0.253  Sum_probs=55.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTV  105 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i  105 (269)
                      ...|+|.|| |++|+.+++.|++ ..+|.+ .+++.+.++++.       .....+.+|++|.+++.++++       +.
T Consensus        16 ~mkilvlGa-G~vG~~~~~~L~~-~~~v~~-~~~~~~~~~~~~-------~~~~~~~~d~~d~~~l~~~~~-------~~   78 (365)
T 3abi_A           16 HMKVLILGA-GNIGRAIAWDLKD-EFDVYI-GDVNNENLEKVK-------EFATPLKVDASNFDKLVEVMK-------EF   78 (365)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHTT-TSEEEE-EESCHHHHHHHT-------TTSEEEECCTTCHHHHHHHHT-------TC
T ss_pred             ccEEEEECC-CHHHHHHHHHHhc-CCCeEE-EEcCHHHHHHHh-------ccCCcEEEecCCHHHHHHHHh-------CC
Confidence            346999998 9999999999875 467766 578887766543       234567899999998888776       78


Q ss_pred             cEEEEccC
Q 024338          106 DILINNAG  113 (269)
Q Consensus       106 d~li~~ag  113 (269)
                      |+||++++
T Consensus        79 DvVi~~~p   86 (365)
T 3abi_A           79 ELVIGALP   86 (365)
T ss_dssp             SEEEECCC
T ss_pred             CEEEEecC
Confidence            99999986

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.60  E-value=3.6e-05  Score=66.23  Aligned_cols=77  Identities=25%  Similarity=0.363  Sum_probs=52.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC-
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG-  103 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~-  103 (269)
                      .|+++||+||+|++|..+++.+...|++|+++ .+++++.+. .+++   +... ++  |..  +++.   +++.+..+ 
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~-~~~~~~~~~-~~~~---ga~~-v~--~~~--~~~~---~~v~~~~~~  225 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAV-VNRTAATEF-VKSV---GADI-VL--PLE--EGWA---KAVREATGG  225 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEE-ESSGGGHHH-HHHH---TCSE-EE--ESS--TTHH---HHHHHHTTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEE-eCCHHHHHH-HHhc---CCcE-Ee--cCc--hhHH---HHHHHHhCC
Confidence            68999999999999999999999999998874 666665543 3333   3332 22  333  2232   33333332 


Q ss_pred             -CccEEEEccCC
Q 024338          104 -TVDILINNAGI  114 (269)
Q Consensus       104 -~id~li~~ag~  114 (269)
                       ++|++|+|+|.
T Consensus       226 ~g~Dvvid~~g~  237 (342)
T 4eye_A          226 AGVDMVVDPIGG  237 (342)
T ss_dssp             SCEEEEEESCC-
T ss_pred             CCceEEEECCch
Confidence             69999999984

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.60  E-value=6.6e-05  Score=56.89  Aligned_cols=80  Identities=14%  Similarity=0.217  Sum_probs=54.8

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      +.+..++.++|+|+ |.+|..+++.|.+.|++|++ +.++++..+.+.+   .  .....+..|.++.+.+.++      
T Consensus        14 ~~~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~v-id~~~~~~~~~~~---~--~g~~~~~~d~~~~~~l~~~------   80 (155)
T 2g1u_A           14 SKKQKSKYIVIFGC-GRLGSLIANLASSSGHSVVV-VDKNEYAFHRLNS---E--FSGFTVVGDAAEFETLKEC------   80 (155)
T ss_dssp             ---CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEE-EESCGGGGGGSCT---T--CCSEEEESCTTSHHHHHTT------
T ss_pred             hcccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEE-EECCHHHHHHHHh---c--CCCcEEEecCCCHHHHHHc------
Confidence            45667899999996 99999999999999999888 4777765543221   1  1234567888886543321      


Q ss_pred             hcCCccEEEEccC
Q 024338          101 AWGTVDILINNAG  113 (269)
Q Consensus       101 ~~~~id~li~~ag  113 (269)
                      ...+.|++|.+.+
T Consensus        81 ~~~~ad~Vi~~~~   93 (155)
T 2g1u_A           81 GMEKADMVFAFTN   93 (155)
T ss_dssp             TGGGCSEEEECSS
T ss_pred             CcccCCEEEEEeC
Confidence            1236899998876

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.58  E-value=0.00025  Score=58.98  Aligned_cols=75  Identities=17%  Similarity=0.248  Sum_probs=55.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC-cEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGC-KVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~-~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      .++++|+++|+|+ ||.|++++..|++.|+ ++.+ ..|+.++.+++.+++..  ..+....  +.+   +.       .
T Consensus       116 ~~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i-~~R~~~~a~~la~~~~~--~~~~~~~--~~~---l~-------~  179 (272)
T 3pwz_A          116 EPLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVI-ANRDMAKALALRNELDH--SRLRISR--YEA---LE-------G  179 (272)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEE-ECSCHHHHHHHHHHHCC--TTEEEEC--SGG---GT-------T
T ss_pred             CCccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEE-EeCCHHHHHHHHHHhcc--CCeeEee--HHH---hc-------c
Confidence            4678999999998 6999999999999996 6666 69999999988888743  2344332  221   11       1


Q ss_pred             hcCCccEEEEccCC
Q 024338          101 AWGTVDILINNAGI  114 (269)
Q Consensus       101 ~~~~id~li~~ag~  114 (269)
                        ...|+|||+...
T Consensus       180 --~~~DivInaTp~  191 (272)
T 3pwz_A          180 --QSFDIVVNATSA  191 (272)
T ss_dssp             --CCCSEEEECSSG
T ss_pred             --cCCCEEEECCCC
Confidence              378999998653

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.57  E-value=0.00042  Score=57.89  Aligned_cols=75  Identities=20%  Similarity=0.288  Sum_probs=56.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC-cEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGC-KVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~-~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      .++++|+++|+|+ ||.|++++..|++.|+ +|.+ ..|+.++.+++.+++...+ .+.....+  +   +.        
T Consensus       122 ~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v-~~R~~~~a~~la~~~~~~~-~~~~~~~~--~---l~--------  185 (281)
T 3o8q_A          122 VLLKGATILLIGA-GGAARGVLKPLLDQQPASITV-TNRTFAKAEQLAELVAAYG-EVKAQAFE--Q---LK--------  185 (281)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEE-EESSHHHHHHHHHHHGGGS-CEEEEEGG--G---CC--------
T ss_pred             CCccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEE-EECCHHHHHHHHHHhhccC-CeeEeeHH--H---hc--------
Confidence            4678999999998 6999999999999997 6666 6999999988888876433 34443221  1   10        


Q ss_pred             hcCCccEEEEccCC
Q 024338          101 AWGTVDILINNAGI  114 (269)
Q Consensus       101 ~~~~id~li~~ag~  114 (269)
                        ...|+||++...
T Consensus       186 --~~aDiIInaTp~  197 (281)
T 3o8q_A          186 --QSYDVIINSTSA  197 (281)
T ss_dssp             --SCEEEEEECSCC
T ss_pred             --CCCCEEEEcCcC
Confidence              378999998764

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.57  E-value=0.00017  Score=56.02  Aligned_cols=79  Identities=18%  Similarity=0.164  Sum_probs=56.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHc-CCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKA-GCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~-G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      .++.++.++|.|+ |.+|..+++.|.+. |+.|++ +.++++..+.+.    +.+  +..+.+|.++.+.++++     .
T Consensus        35 ~~~~~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~v-id~~~~~~~~~~----~~g--~~~~~gd~~~~~~l~~~-----~  101 (183)
T 3c85_A           35 INPGHAQVLILGM-GRIGTGAYDELRARYGKISLG-IEIREEAAQQHR----SEG--RNVISGDATDPDFWERI-----L  101 (183)
T ss_dssp             BCCTTCSEEEECC-SHHHHHHHHHHHHHHCSCEEE-EESCHHHHHHHH----HTT--CCEEECCTTCHHHHHTB-----C
T ss_pred             cCCCCCcEEEECC-CHHHHHHHHHHHhccCCeEEE-EECCHHHHHHHH----HCC--CCEEEcCCCCHHHHHhc-----c
Confidence            3566778899985 89999999999999 999888 478877665433    223  44577899987654432     0


Q ss_pred             hcCCccEEEEccC
Q 024338          101 AWGTVDILINNAG  113 (269)
Q Consensus       101 ~~~~id~li~~ag  113 (269)
                      ...+.|.+|.+.+
T Consensus       102 ~~~~ad~vi~~~~  114 (183)
T 3c85_A          102 DTGHVKLVLLAMP  114 (183)
T ss_dssp             SCCCCCEEEECCS
T ss_pred             CCCCCCEEEEeCC
Confidence            1247899998765

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.55  E-value=0.00011  Score=62.20  Aligned_cols=96  Identities=15%  Similarity=0.196  Sum_probs=60.3

Q ss_pred             CCCCCE-EEEeCCCC-----------------c-hHHHHHHHHHHcCCcEEEEecCCHH-H------HHHHHHHHHH---
Q 024338           23 NVEAPV-AVVTGASR-----------------G-IGRAVATSLGKAGCKVLVNYARSSK-E------AEEVCKEIEA---   73 (269)
Q Consensus        23 ~~~~k~-vlItGas~-----------------g-iG~~~a~~l~~~G~~v~i~~~r~~~-~------~~~~~~~l~~---   73 (269)
                      ++.||. ||||+|..                 | .|.++|++|+++|+.|+++.+...- .      ...+.+.+..   
T Consensus        33 ~l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~sl~p~~r~~~~~~~~~~~~~~~~  112 (313)
T 1p9o_A           33 GAQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARSAFPYAHRFPPQTWLSALRPSGP  112 (313)
T ss_dssp             HHTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTSCCTTGGGSCHHHHHHHCEECCC
T ss_pred             hhcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCCcCcchhccCccchhhhhccccc
Confidence            467887 99998865                 5 9999999999999999986443210 0      0011111110   


Q ss_pred             cCCcEEEEEccCCCHHHHHHHHHHH------------------------------HHhcCCccEEEEccCCCCCC
Q 024338           74 SGGQALTFGGDVSKEADVESMIKTA------------------------------VDAWGTVDILINNAGITRDT  118 (269)
Q Consensus        74 ~~~~~~~~~~Dls~~~~~~~~~~~~------------------------------~~~~~~id~li~~ag~~~~~  118 (269)
                      ....+..+..|+.+.+++.+++.+.                              .+.+++.|++|.+|+..+..
T Consensus       113 ~~~~~~~i~v~v~sa~~m~~av~~~~~~~~~~~l~~i~f~tv~eyl~~L~~~~~~l~~~~~~di~i~aAAVsDf~  187 (313)
T 1p9o_A          113 ALSGLLSLEAEENALPGFAEALRSYQEAAAAGTFLVVEFTTLADYLHLLQAAAQALNPLGPSAMFYLAAAVSDFY  187 (313)
T ss_dssp             -CCSEEEEEEETTTSTTHHHHHHHHHHHHHHTCEEEEEECBHHHHHHHHHHHHHHHGGGGGGEEEEECSBCCSEE
T ss_pred             cccccceeeeccccHHHHHHHHHHHhhhhccccceeeccccHHHHHHHHHHhhHHhhccCCCCEEEECCchhhcc
Confidence            1122345566666655555555433                              23457899999999987654

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.54  E-value=0.00032  Score=60.37  Aligned_cols=102  Identities=21%  Similarity=0.244  Sum_probs=66.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-cEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGC-KVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~-~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      .|+++||+|+ |++|..+++.+...|+ +|++ +.+++++.+.+ +++   +...   ..|..+.+ +.   +++.+..+
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~-~~~~~~~~~~~-~~~---Ga~~---~~~~~~~~-~~---~~v~~~~~  233 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIV-SEPSDFRRELA-KKV---GADY---VINPFEED-VV---KEVMDITD  233 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEE-ECSCHHHHHHH-HHH---TCSE---EECTTTSC-HH---HHHHHHTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEE-ECCCHHHHHHH-HHh---CCCE---EECCCCcC-HH---HHHHHHcC
Confidence            7899999999 9999999999999999 8877 47776655433 333   3322   23544422 22   23333222


Q ss_pred             --CccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcc
Q 024338          104 --TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVG  166 (269)
Q Consensus       104 --~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  166 (269)
                        ++|++|.++|..                         ...+.+++.+  ++.|+++.+++...
T Consensus       234 g~g~D~vid~~g~~-------------------------~~~~~~~~~l--~~~G~iv~~g~~~~  271 (348)
T 2d8a_A          234 GNGVDVFLEFSGAP-------------------------KALEQGLQAV--TPAGRVSLLGLYPG  271 (348)
T ss_dssp             TSCEEEEEECSCCH-------------------------HHHHHHHHHE--EEEEEEEECCCCSS
T ss_pred             CCCCCEEEECCCCH-------------------------HHHHHHHHHH--hcCCEEEEEccCCC
Confidence              699999999831                         0134455555  45789999987543

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.53  E-value=0.00043  Score=56.82  Aligned_cols=83  Identities=14%  Similarity=0.240  Sum_probs=60.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCH-------------------HHHHHHHHHHHHcC--CcEEE
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSS-------------------KEAEEVCKEIEASG--GQALT   80 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~-------------------~~~~~~~~~l~~~~--~~~~~   80 (269)
                      ..+++++|+|.|+ ||+|..+++.|++.|...+.+++++.                   .+.+.+.+.+.+..  .++..
T Consensus        27 ~~l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~  105 (249)
T 1jw9_B           27 EALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITP  105 (249)
T ss_dssp             HHHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEE
T ss_pred             HHHhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEE
Confidence            3567899999997 69999999999999985444467776                   67777777777653  34566


Q ss_pred             EEccCCCHHHHHHHHHHHHHhcCCccEEEEccC
Q 024338           81 FGGDVSKEADVESMIKTAVDAWGTVDILINNAG  113 (269)
Q Consensus        81 ~~~Dls~~~~~~~~~~~~~~~~~~id~li~~ag  113 (269)
                      +..++++ +.+.+++.       ..|+||.+..
T Consensus       106 ~~~~~~~-~~~~~~~~-------~~DvVi~~~d  130 (249)
T 1jw9_B          106 VNALLDD-AELAALIA-------EHDLVLDCTD  130 (249)
T ss_dssp             ECSCCCH-HHHHHHHH-------TSSEEEECCS
T ss_pred             EeccCCH-hHHHHHHh-------CCCEEEEeCC
Confidence            6666763 34444433       7899998864

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=97.48  E-value=0.0029  Score=52.73  Aligned_cols=42  Identities=19%  Similarity=0.229  Sum_probs=35.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHH
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKE   70 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~   70 (269)
                      +++.|.|+ |.+|..+|..|++.|++|++ ..++++.+++..+.
T Consensus         5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l-~d~~~~~~~~~~~~   46 (283)
T 4e12_A            5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTA-YDINTDALDAAKKR   46 (283)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEE-ECSSHHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEE-EeCCHHHHHHHHHH
Confidence            67888876 78999999999999999988 58888877766554

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.47  E-value=0.00033  Score=60.71  Aligned_cols=103  Identities=24%  Similarity=0.301  Sum_probs=67.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      .|+++||+||+|++|..+++.+...|++|++ +.+++++.+.+. +   .+... +  .|.++. ++.+.+.+..  -++
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~-~~~~~~~~~~~~-~---~Ga~~-~--~~~~~~-~~~~~~~~~~--~~g  231 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIG-TCSSDEKSAFLK-S---LGCDR-P--INYKTE-PVGTVLKQEY--PEG  231 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEE-EESSHHHHHHHH-H---TTCSE-E--EETTTS-CHHHHHHHHC--TTC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEE-EECCHHHHHHHH-H---cCCcE-E--EecCCh-hHHHHHHHhc--CCC
Confidence            6899999999999999999999999999877 467766554332 2   34332 2  244432 2333333321  136


Q ss_pred             ccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcc
Q 024338          105 VDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVG  166 (269)
Q Consensus       105 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  166 (269)
                      +|++|+|+|.           +               ..+.+++.+  ++.|+++.+++..+
T Consensus       232 ~D~vid~~g~-----------~---------------~~~~~~~~l--~~~G~iv~~g~~~~  265 (362)
T 2c0c_A          232 VDVVYESVGG-----------A---------------MFDLAVDAL--ATKGRLIVIGFISG  265 (362)
T ss_dssp             EEEEEECSCT-----------H---------------HHHHHHHHE--EEEEEEEECCCGGG
T ss_pred             CCEEEECCCH-----------H---------------HHHHHHHHH--hcCCEEEEEeCCCC
Confidence            9999999982           0               123344555  45689999987654

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.43  E-value=0.00035  Score=60.02  Aligned_cols=76  Identities=14%  Similarity=0.334  Sum_probs=51.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      .|+++||+||+|++|..+++.+...|++|+++  +++++++ +++++   +...    .| .+ +++.+.+.+.... .+
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~--~~~~~~~-~~~~l---Ga~~----i~-~~-~~~~~~~~~~~~~-~g  216 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT--ARGSDLE-YVRDL---GATP----ID-AS-REPEDYAAEHTAG-QG  216 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE--ECHHHHH-HHHHH---TSEE----EE-TT-SCHHHHHHHHHTT-SC
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE--eCHHHHH-HHHHc---CCCE----ec-cC-CCHHHHHHHHhcC-CC
Confidence            68999999999999999999999999998874  5555544 33333   4433    34 32 2233333333221 26


Q ss_pred             ccEEEEccC
Q 024338          105 VDILINNAG  113 (269)
Q Consensus       105 id~li~~ag  113 (269)
                      +|++|.++|
T Consensus       217 ~D~vid~~g  225 (343)
T 3gaz_A          217 FDLVYDTLG  225 (343)
T ss_dssp             EEEEEESSC
T ss_pred             ceEEEECCC
Confidence            999999998

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.42  E-value=0.0009  Score=49.61  Aligned_cols=76  Identities=14%  Similarity=0.157  Sum_probs=56.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      +++ +.++|.|+ |.+|..+++.|.+.|+.|++ +.++++..+++.+      ..+.++.+|.++++.++++      ..
T Consensus         5 ~~~-~~viIiG~-G~~G~~la~~L~~~g~~v~v-id~~~~~~~~~~~------~g~~~i~gd~~~~~~l~~a------~i   69 (140)
T 3fwz_A            5 DIC-NHALLVGY-GRVGSLLGEKLLASDIPLVV-IETSRTRVDELRE------RGVRAVLGNAANEEIMQLA------HL   69 (140)
T ss_dssp             CCC-SCEEEECC-SHHHHHHHHHHHHTTCCEEE-EESCHHHHHHHHH------TTCEEEESCTTSHHHHHHT------TG
T ss_pred             cCC-CCEEEECc-CHHHHHHHHHHHHCCCCEEE-EECCHHHHHHHHH------cCCCEEECCCCCHHHHHhc------Cc
Confidence            344 45778887 78999999999999999988 5888877665443      2456788999998766543      12


Q ss_pred             CCccEEEEccC
Q 024338          103 GTVDILINNAG  113 (269)
Q Consensus       103 ~~id~li~~ag  113 (269)
                      .+.|.+|.+.+
T Consensus        70 ~~ad~vi~~~~   80 (140)
T 3fwz_A           70 ECAKWLILTIP   80 (140)
T ss_dssp             GGCSEEEECCS
T ss_pred             ccCCEEEEECC
Confidence            36888887765

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.42  E-value=0.00096  Score=57.75  Aligned_cols=103  Identities=19%  Similarity=0.212  Sum_probs=66.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      .|+++||+| +|++|...++.+...|++|+++ .+++++++. ++++   +.+..   .| .+.+++.+.+.++... .+
T Consensus       189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~-~~~~~~~~~-~~~l---Ga~~v---i~-~~~~~~~~~v~~~~~g-~g  257 (363)
T 3uog_A          189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVT-SSSREKLDR-AFAL---GADHG---IN-RLEEDWVERVYALTGD-RG  257 (363)
T ss_dssp             TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEE-ESCHHHHHH-HHHH---TCSEE---EE-TTTSCHHHHHHHHHTT-CC
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEE-ecCchhHHH-HHHc---CCCEE---Ec-CCcccHHHHHHHHhCC-CC
Confidence            689999999 8999999999999999998874 677666554 3333   43322   24 3333333333333221 26


Q ss_pred             ccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcc
Q 024338          105 VDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVG  166 (269)
Q Consensus       105 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  166 (269)
                      +|++|.++|.  ..                        .+..+..+  +++|+++.++...+
T Consensus       258 ~D~vid~~g~--~~------------------------~~~~~~~l--~~~G~iv~~G~~~~  291 (363)
T 3uog_A          258 ADHILEIAGG--AG------------------------LGQSLKAV--APDGRISVIGVLEG  291 (363)
T ss_dssp             EEEEEEETTS--SC------------------------HHHHHHHE--EEEEEEEEECCCSS
T ss_pred             ceEEEECCCh--HH------------------------HHHHHHHh--hcCCEEEEEecCCC
Confidence            9999999982  10                        23344444  56789999976554

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=97.39  E-value=0.0003  Score=60.42  Aligned_cols=100  Identities=14%  Similarity=0.155  Sum_probs=64.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-cEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGC-KVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~-~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      .|+++||+|+ |++|..+++.+...|+ +|++ +.+++++.+.+ +++    ..   ...|..+ +++.+.+.++.  ..
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~-~~~~~~~~~~~-~~l----a~---~v~~~~~-~~~~~~~~~~~--~~  230 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILV-SDPNPYRLAFA-RPY----AD---RLVNPLE-EDLLEVVRRVT--GS  230 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEE-ECSCHHHHGGG-TTT----CS---EEECTTT-SCHHHHHHHHH--SS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEE-ECCCHHHHHHH-HHh----HH---hccCcCc-cCHHHHHHHhc--CC
Confidence            7899999999 9999999999888999 8887 46776655432 222    11   1235444 23333333333  24


Q ss_pred             CccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Q 024338          104 TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASV  164 (269)
Q Consensus       104 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~  164 (269)
                      ++|++|.++|.          .               ...+..++.+  ++.|+++.+++.
T Consensus       231 g~D~vid~~g~----------~---------------~~~~~~~~~l--~~~G~iv~~g~~  264 (343)
T 2dq4_A          231 GVEVLLEFSGN----------E---------------AAIHQGLMAL--IPGGEARILGIP  264 (343)
T ss_dssp             CEEEEEECSCC----------H---------------HHHHHHHHHE--EEEEEEEECCCC
T ss_pred             CCCEEEECCCC----------H---------------HHHHHHHHHH--hcCCEEEEEecC
Confidence            79999999983          0               1134445555  456899998764

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.37  E-value=0.0033  Score=54.07  Aligned_cols=102  Identities=21%  Similarity=0.269  Sum_probs=63.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCC-HHHHHHHHHHHHH--h
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK-EADVESMIKTAVD--A  101 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~-~~~~~~~~~~~~~--~  101 (269)
                      .|+++||+|+ |++|...++.+...|++|++ +.+++++++.+ ++   .+.+. +  .|.++ .+..+++ .+...  .
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~-~~~~~~~~~~~-~~---lGa~~-~--~~~~~~~~~~~~i-~~~~~~~~  237 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVC-TARSPRRLEVA-KN---CGADV-T--LVVDPAKEEESSI-IERIRSAI  237 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEE-EESCHHHHHHH-HH---TTCSE-E--EECCTTTSCHHHH-HHHHHHHS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEE-EcCCHHHHHHH-HH---hCCCE-E--EcCcccccHHHHH-HHHhcccc
Confidence            6899999997 89999999988889999766 56777665433 23   34442 2  24433 2222222 22211  0


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcC
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIAS  163 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS  163 (269)
                      -.++|++|+++|..          .               ..+..++.+  ++.|+++.++.
T Consensus       238 g~g~D~vid~~g~~----------~---------------~~~~~~~~l--~~~G~iv~~G~  272 (352)
T 1e3j_A          238 GDLPNVTIDCSGNE----------K---------------CITIGINIT--RTGGTLMLVGM  272 (352)
T ss_dssp             SSCCSEEEECSCCH----------H---------------HHHHHHHHS--CTTCEEEECSC
T ss_pred             CCCCCEEEECCCCH----------H---------------HHHHHHHHH--hcCCEEEEEec
Confidence            13699999999831          1               123344444  56789999875

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.37  E-value=0.0001  Score=55.05  Aligned_cols=71  Identities=17%  Similarity=0.223  Sum_probs=52.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTV  105 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i  105 (269)
                      +++++|.|+ |++|..+++.|.+.|+++.+ ..|++++.+++.+++.   ..+  .  +..+.   .+++.       ..
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v-~~r~~~~~~~~a~~~~---~~~--~--~~~~~---~~~~~-------~~   81 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTV-AGRNIDHVRAFAEKYE---YEY--V--LINDI---DSLIK-------NN   81 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEE-EESCHHHHHHHHHHHT---CEE--E--ECSCH---HHHHH-------TC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEE-EcCCHHHHHHHHHHhC---Cce--E--eecCH---HHHhc-------CC
Confidence            899999997 99999999999999999555 7899988887777652   211  1  22332   33332       68


Q ss_pred             cEEEEccCCC
Q 024338          106 DILINNAGIT  115 (269)
Q Consensus       106 d~li~~ag~~  115 (269)
                      |++|++.+..
T Consensus        82 Divi~at~~~   91 (144)
T 3oj0_A           82 DVIITATSSK   91 (144)
T ss_dssp             SEEEECSCCS
T ss_pred             CEEEEeCCCC
Confidence            9999998753

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.36  E-value=0.0008  Score=57.84  Aligned_cols=77  Identities=17%  Similarity=0.228  Sum_probs=52.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      .|+++||+||+|++|..+++.+...|++|++ +.+++++.+.+ +++   +.+. +  .|..+  ++.+.+.++  ..++
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~-~~~~~~~~~~~-~~l---Ga~~-v--i~~~~--~~~~~~~~~--~~~g  217 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVIT-TASRNETIEWT-KKM---GADI-V--LNHKE--SLLNQFKTQ--GIEL  217 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEE-ECCSHHHHHHH-HHH---TCSE-E--ECTTS--CHHHHHHHH--TCCC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEE-EeCCHHHHHHH-Hhc---CCcE-E--EECCc--cHHHHHHHh--CCCC
Confidence            5899999999999999999999999999887 46777665433 333   3332 1  23332  222323332  2236


Q ss_pred             ccEEEEccC
Q 024338          105 VDILINNAG  113 (269)
Q Consensus       105 id~li~~ag  113 (269)
                      +|++|+++|
T Consensus       218 ~Dvv~d~~g  226 (346)
T 3fbg_A          218 VDYVFCTFN  226 (346)
T ss_dssp             EEEEEESSC
T ss_pred             ccEEEECCC
Confidence            999999987

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=97.30  E-value=0.006  Score=52.52  Aligned_cols=78  Identities=19%  Similarity=0.253  Sum_probs=50.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-cEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCC--CHHHHHHHHHHHHHh
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGC-KVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVS--KEADVESMIKTAVDA  101 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~-~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls--~~~~~~~~~~~~~~~  101 (269)
                      .|+++||+|+ |++|...++.+...|+ +|++ +.+++++.+. +++   .+... +  .|..  +.++..+.+.+... 
T Consensus       171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~-~~~~~~~~~~-a~~---lGa~~-v--i~~~~~~~~~~~~~i~~~~~-  240 (356)
T 1pl8_A          171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVV-TDLSATRLSK-AKE---IGADL-V--LQISKESPQEIARKVEGQLG-  240 (356)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEE-EESCHHHHHH-HHH---TTCSE-E--EECSSCCHHHHHHHHHHHHT-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEE-ECCCHHHHHH-HHH---hCCCE-E--EcCcccccchHHHHHHHHhC-
Confidence            6899999996 8999999988888999 6666 4677665543 333   34432 2  2433  23333332333222 


Q ss_pred             cCCccEEEEccC
Q 024338          102 WGTVDILINNAG  113 (269)
Q Consensus       102 ~~~id~li~~ag  113 (269)
                       +++|++|.++|
T Consensus       241 -~g~D~vid~~g  251 (356)
T 1pl8_A          241 -CKPEVTIECTG  251 (356)
T ss_dssp             -SCCSEEEECSC
T ss_pred             -CCCCEEEECCC
Confidence             47999999998

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.29  E-value=0.00065  Score=54.35  Aligned_cols=73  Identities=16%  Similarity=0.209  Sum_probs=56.1

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCccE
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDI  107 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~  107 (269)
                      .++|+|+ |.+|..+++.|.++|+.|++ ..++++..+++.+..     ...++.+|.++.+.++++      ...+.|.
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~v-id~~~~~~~~l~~~~-----~~~~i~gd~~~~~~l~~a------~i~~ad~   68 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVI-INKDRELCEEFAKKL-----KATIIHGDGSHKEILRDA------EVSKNDV   68 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEE-EESCHHHHHHHHHHS-----SSEEEESCTTSHHHHHHH------TCCTTCE
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEE-EECCHHHHHHHHHHc-----CCeEEEcCCCCHHHHHhc------CcccCCE
Confidence            4889996 89999999999999999988 578888776654432     355789999998766543      1247899


Q ss_pred             EEEccC
Q 024338          108 LINNAG  113 (269)
Q Consensus       108 li~~ag  113 (269)
                      +|.+.+
T Consensus        69 vi~~~~   74 (218)
T 3l4b_C           69 VVILTP   74 (218)
T ss_dssp             EEECCS
T ss_pred             EEEecC
Confidence            887764

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=97.26  E-value=0.0015  Score=56.01  Aligned_cols=120  Identities=16%  Similarity=0.199  Sum_probs=69.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC--cEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGC--KVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~--~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      +++.+.|+|++|.+|..++..++.+|.  ++++ ++.++++++....++....-.    ..++.-..+..+.+       
T Consensus         7 ~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvL-iDi~~~k~~g~a~DL~~~~~~----~~~i~~t~d~~~al-------   74 (343)
T 3fi9_A            7 TEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCL-YDPFAVGLEGVAEEIRHCGFE----GLNLTFTSDIKEAL-------   74 (343)
T ss_dssp             CSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEE-ECSCHHHHHHHHHHHHHHCCT----TCCCEEESCHHHHH-------
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhcCCCCEEEE-EeCCchhHHHHHHhhhhCcCC----CCceEEcCCHHHHh-------
Confidence            457899999999999999999999984  5665 688887776655555542100    01111001122222       


Q ss_pred             CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCe-EEEEcCCc
Q 024338          103 GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGR-IINIASVV  165 (269)
Q Consensus       103 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~-iv~isS~~  165 (269)
                      ...|++|.+||....      +.+.-.+.++.|..-...+.+.+..+   .+++. ++++|.-.
T Consensus        75 ~dADvVvitaG~p~k------pG~~R~dLl~~N~~I~~~i~~~i~~~---~p~a~~vlvvsNPv  129 (343)
T 3fi9_A           75 TDAKYIVSSGGAPRK------EGMTREDLLKGNAEIAAQLGKDIKSY---CPDCKHVIIIFNPA  129 (343)
T ss_dssp             TTEEEEEECCC-------------CHHHHHHHHHHHHHHHHHHHHHH---CTTCCEEEECSSSH
T ss_pred             CCCCEEEEccCCCCC------CCCCHHHHHHHHHHHHHHHHHHHHHh---ccCcEEEEEecCch
Confidence            378999999996422      11223455677766544444444332   35564 67776543

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.23  E-value=0.00064  Score=57.25  Aligned_cols=74  Identities=16%  Similarity=0.219  Sum_probs=50.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      .|+++||+|++|++|..+++.+...|++|+++ .+++++.+.+ ++   .+...   ..|..+.+++   .+++    ++
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~-~~~~~~~~~~-~~---~ga~~---~~~~~~~~~~---~~~~----~~  189 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAA-ASRPEKLALP-LA---LGAEE---AATYAEVPER---AKAW----GG  189 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEE-ESSGGGSHHH-HH---TTCSE---EEEGGGHHHH---HHHT----TS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE-eCCHHHHHHH-Hh---cCCCE---EEECCcchhH---HHHh----cC
Confidence            58999999999999999999999999998874 6666655433 22   23332   1344441222   2222    58


Q ss_pred             ccEEEEccCC
Q 024338          105 VDILINNAGI  114 (269)
Q Consensus       105 id~li~~ag~  114 (269)
                      +|++|+ +|.
T Consensus       190 ~d~vid-~g~  198 (302)
T 1iz0_A          190 LDLVLE-VRG  198 (302)
T ss_dssp             EEEEEE-CSC
T ss_pred             ceEEEE-CCH
Confidence            999999 874

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=97.21  E-value=0.0023  Score=55.76  Aligned_cols=104  Identities=16%  Similarity=0.221  Sum_probs=65.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcC-CcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAG-CKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G-~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      .|+++||+| +|++|...++.+...| ++|++ +.+++++.+.+ ++   .+.+. ++..+.++.+++.+   ++.+..+
T Consensus       195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~-~~~~~~~~~~~-~~---lGa~~-vi~~~~~~~~~~~~---~v~~~~~  264 (380)
T 1vj0_A          195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIV-IAGSPNRLKLA-EE---IGADL-TLNRRETSVEERRK---AIMDITH  264 (380)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEE-EESCHHHHHHH-HH---TTCSE-EEETTTSCHHHHHH---HHHHHTT
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEE-EcCCHHHHHHH-HH---cCCcE-EEeccccCcchHHH---HHHHHhC
Confidence            589999999 8999999999888899 58877 46777665433 23   34332 22221122344433   3333332


Q ss_pred             --CccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCc
Q 024338          104 --TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVV  165 (269)
Q Consensus       104 --~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  165 (269)
                        ++|++|.++|...                         ..+..++.+  ++.|+++.++...
T Consensus       265 g~g~Dvvid~~g~~~-------------------------~~~~~~~~l--~~~G~iv~~G~~~  301 (380)
T 1vj0_A          265 GRGADFILEATGDSR-------------------------ALLEGSELL--RRGGFYSVAGVAV  301 (380)
T ss_dssp             TSCEEEEEECSSCTT-------------------------HHHHHHHHE--EEEEEEEECCCCS
T ss_pred             CCCCcEEEECCCCHH-------------------------HHHHHHHHH--hcCCEEEEEecCC
Confidence              6999999998420                         123344544  4578999887653

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.19  E-value=0.0013  Score=57.95  Aligned_cols=73  Identities=25%  Similarity=0.458  Sum_probs=53.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-cEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGC-KVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~-~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      ++.|++++|.|+ |++|..+++.+...|+ +|++ +.|+.++.+++.+++   +..  .  .+.   +++.+.+      
T Consensus       164 ~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v-~~r~~~ra~~la~~~---g~~--~--~~~---~~l~~~l------  225 (404)
T 1gpj_A          164 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLV-ANRTYERAVELARDL---GGE--A--VRF---DELVDHL------  225 (404)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEE-ECSSHHHHHHHHHHH---TCE--E--CCG---GGHHHHH------
T ss_pred             cccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEE-EeCCHHHHHHHHHHc---CCc--e--ecH---HhHHHHh------
Confidence            578999999998 9999999999999998 6666 688887776666655   222  1  222   2233333      


Q ss_pred             cCCccEEEEccCC
Q 024338          102 WGTVDILINNAGI  114 (269)
Q Consensus       102 ~~~id~li~~ag~  114 (269)
                       ...|+||.+.+.
T Consensus       226 -~~aDvVi~at~~  237 (404)
T 1gpj_A          226 -ARSDVVVSATAA  237 (404)
T ss_dssp             -HTCSEEEECCSS
T ss_pred             -cCCCEEEEccCC
Confidence             278999999864

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.16  E-value=0.003  Score=52.89  Aligned_cols=91  Identities=10%  Similarity=0.214  Sum_probs=65.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCH------------------HHHHHHHHHHHHcC--CcEEEE
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSS------------------KEAEEVCKEIEASG--GQALTF   81 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~------------------~~~~~~~~~l~~~~--~~~~~~   81 (269)
                      ..+++++|+|.|++ |+|..+++.|+..|..-+.+++.+.                  .+.+...+.+++..  .++..+
T Consensus        32 ~kL~~~~VlVvGaG-GlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~  110 (292)
T 3h8v_A           32 EKIRTFAVAIVGVG-GVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVH  110 (292)
T ss_dssp             CGGGGCEEEEECCS-HHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHHhCCeEEEECcC-HHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEe
Confidence            45788999999875 9999999999999977555566654                  45566666676654  456667


Q ss_pred             EccCCCHHHHHHHHHHHHHh----cCCccEEEEccC
Q 024338           82 GGDVSKEADVESMIKTAVDA----WGTVDILINNAG  113 (269)
Q Consensus        82 ~~Dls~~~~~~~~~~~~~~~----~~~id~li~~ag  113 (269)
                      ..++++.+.++.+++.+...    ....|+||.+..
T Consensus       111 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~D  146 (292)
T 3h8v_A          111 NYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVD  146 (292)
T ss_dssp             CCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCS
T ss_pred             cccCCcHHHHHHHhhhhcccccccCCCCCEEEECCc
Confidence            77888877777776554321    136899987663

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.14  E-value=0.0015  Score=56.79  Aligned_cols=76  Identities=16%  Similarity=0.227  Sum_probs=50.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      .|+++||+||+|++|..+++.+...|++|+++ .+ +++.+ +++   +.+.+..   .|.++.+-.    +++.+ .++
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~-~~-~~~~~-~~~---~lGa~~v---~~~~~~~~~----~~~~~-~~g  248 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAV-CS-QDASE-LVR---KLGADDV---IDYKSGSVE----EQLKS-LKP  248 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-EC-GGGHH-HHH---HTTCSEE---EETTSSCHH----HHHHT-SCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEE-eC-hHHHH-HHH---HcCCCEE---EECCchHHH----HHHhh-cCC
Confidence            68999999999999999999999999998875 43 33333 233   3344322   244443222    22322 257


Q ss_pred             ccEEEEccCC
Q 024338          105 VDILINNAGI  114 (269)
Q Consensus       105 id~li~~ag~  114 (269)
                      +|++|+++|.
T Consensus       249 ~D~vid~~g~  258 (375)
T 2vn8_A          249 FDFILDNVGG  258 (375)
T ss_dssp             BSEEEESSCT
T ss_pred             CCEEEECCCC
Confidence            9999999983

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=97.13  E-value=0.0033  Score=54.56  Aligned_cols=79  Identities=16%  Similarity=0.269  Sum_probs=51.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-cEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCC-HHHHHHHHHHHHHhc
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGC-KVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK-EADVESMIKTAVDAW  102 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~-~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~-~~~~~~~~~~~~~~~  102 (269)
                      .|+++||+|+ |++|...++.+...|+ +|++ +.+++++.+.+ ++   .+.+. +  .|.++ .+++.+.+.++..  
T Consensus       192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~-~~~~~~~~~~~-~~---lGa~~-v--i~~~~~~~~~~~~~~~~~~--  260 (374)
T 1cdo_A          192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIA-VDLNPDKFEKA-KV---FGATD-F--VNPNDHSEPISQVLSKMTN--  260 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEE-ECSCGGGHHHH-HH---TTCCE-E--ECGGGCSSCHHHHHHHHHT--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEE-EcCCHHHHHHH-HH---hCCce-E--EeccccchhHHHHHHHHhC--
Confidence            6799999996 8999999998888999 5666 56777665533 23   34332 2  24332 1234443444333  


Q ss_pred             CCccEEEEccCC
Q 024338          103 GTVDILINNAGI  114 (269)
Q Consensus       103 ~~id~li~~ag~  114 (269)
                      +++|++|.++|.
T Consensus       261 ~g~D~vid~~g~  272 (374)
T 1cdo_A          261 GGVDFSLECVGN  272 (374)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999984

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=97.09  E-value=0.0027  Score=55.71  Aligned_cols=43  Identities=23%  Similarity=0.264  Sum_probs=35.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHH
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEV   67 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~   67 (269)
                      .+.+++++|+|+ |.+|..+++.+...|++|++ +.++.+.++.+
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v-~D~~~~~~~~~  211 (401)
T 1x13_A          169 KVPPAKVMVIGA-GVAGLAAIGAANSLGAIVRA-FDTRPEVKEQV  211 (401)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEE-ECSCGGGHHHH
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEE-EcCCHHHHHHH
Confidence            367899999997 89999999999999998777 57777666543

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=97.05  E-value=0.0014  Score=56.72  Aligned_cols=83  Identities=13%  Similarity=0.202  Sum_probs=49.4

Q ss_pred             CC-CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHH--HHHHHHHHHHHcCCcEEEEEccCCCH--HHHHHHHHHHH
Q 024338           25 EA-PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSK--EAEEVCKEIEASGGQALTFGGDVSKE--ADVESMIKTAV   99 (269)
Q Consensus        25 ~~-k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~--~~~~~~~~l~~~~~~~~~~~~Dls~~--~~~~~~~~~~~   99 (269)
                      .| +++||+||+|++|...++.+...|++++++++....  ...+.++++   +.+.. +  |..+.  +++.+.+.++.
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~l---Ga~~v-i--~~~~~~~~~~~~~i~~~t  239 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKEL---GATQV-I--TEDQNNSREFGPTIKEWI  239 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHH---TCSEE-E--EHHHHHCGGGHHHHHHHH
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhc---CCeEE-E--ecCccchHHHHHHHHHHh
Confidence            57 999999999999999998888899998885433322  122233333   44322 2  21110  12222222222


Q ss_pred             H-hcCCccEEEEccC
Q 024338          100 D-AWGTVDILINNAG  113 (269)
Q Consensus       100 ~-~~~~id~li~~ag  113 (269)
                      . .-+++|++|.++|
T Consensus       240 ~~~~~g~Dvvid~~G  254 (364)
T 1gu7_A          240 KQSGGEAKLALNCVG  254 (364)
T ss_dssp             HHHTCCEEEEEESSC
T ss_pred             hccCCCceEEEECCC
Confidence            0 1237999999998

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=97.03  E-value=0.0036  Score=54.28  Aligned_cols=103  Identities=20%  Similarity=0.320  Sum_probs=64.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-cEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH--
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGC-KVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD--  100 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~-~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~--  100 (269)
                      -.|+++||+|+ |++|...++.+...|+ .|++ +.+++++.+ +++++   +...   ..|.++.+ +.   +++.+  
T Consensus       181 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~-~~~~~~~~~-~a~~l---Ga~~---vi~~~~~~-~~---~~i~~~~  247 (370)
T 4ej6_A          181 KAGSTVAILGG-GVIGLLTVQLARLAGATTVIL-STRQATKRR-LAEEV---GATA---TVDPSAGD-VV---EAIAGPV  247 (370)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEE-ECSCHHHHH-HHHHH---TCSE---EECTTSSC-HH---HHHHSTT
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEE-ECCCHHHHH-HHHHc---CCCE---EECCCCcC-HH---HHHHhhh
Confidence            36899999998 8999999998888999 5555 567766554 44444   3332   23444432 22   23332  


Q ss_pred             -h-cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcc
Q 024338          101 -A-WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVG  166 (269)
Q Consensus       101 -~-~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  166 (269)
                       . .+++|++|.++|..          +               ..+.++..+  +++|+++.++...+
T Consensus       248 ~~~~gg~Dvvid~~G~~----------~---------------~~~~~~~~l--~~~G~vv~~G~~~~  288 (370)
T 4ej6_A          248 GLVPGGVDVVIECAGVA----------E---------------TVKQSTRLA--KAGGTVVILGVLPQ  288 (370)
T ss_dssp             SSSTTCEEEEEECSCCH----------H---------------HHHHHHHHE--EEEEEEEECSCCCT
T ss_pred             hccCCCCCEEEECCCCH----------H---------------HHHHHHHHh--ccCCEEEEEeccCC
Confidence             2 24799999998731          1               133444544  46789998876543

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.02  E-value=0.016  Score=49.24  Aligned_cols=117  Identities=15%  Similarity=0.121  Sum_probs=73.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC--cEEEEecCCHHHHHHHHHHHHHcC----CcEEEEEccCCCHHHHHHHHHHH
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGC--KVLVNYARSSKEAEEVCKEIEASG----GQALTFGGDVSKEADVESMIKTA   98 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~--~v~i~~~r~~~~~~~~~~~l~~~~----~~~~~~~~Dls~~~~~~~~~~~~   98 (269)
                      +.+.+.|+|+ |.+|.+++..|+..|.  ++++ .++++++++....++....    ..+.....|              
T Consensus         4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l-~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~--------------   67 (326)
T 3pqe_A            4 HVNKVALIGA-GFVGSSYAFALINQGITDELVV-IDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT--------------   67 (326)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEE-ECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC--------------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEE-EecchHHHHHHHHHHHhccccccCCeEEEeCc--------------
Confidence            3567999996 9999999999999986  5665 6888887776665665431    223333222              


Q ss_pred             HHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcc
Q 024338           99 VDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVG  166 (269)
Q Consensus        99 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  166 (269)
                      .+.+...|++|.++|.....   ..+   -.+.++.|..-...+.+.+..   ..+.+.++++|....
T Consensus        68 ~~a~~~aDvVvi~ag~p~kp---G~~---R~dL~~~N~~Iv~~i~~~I~~---~~p~a~vlvvtNPvd  126 (326)
T 3pqe_A           68 YEDCKDADIVCICAGANQKP---GET---RLELVEKNLKIFKGIVSEVMA---SGFDGIFLVATNPVD  126 (326)
T ss_dssp             GGGGTTCSEEEECCSCCCCT---TCC---HHHHHHHHHHHHHHHHHHHHH---TTCCSEEEECSSSHH
T ss_pred             HHHhCCCCEEEEecccCCCC---Ccc---HHHHHHHHHHHHHHHHHHHHH---hcCCeEEEEcCChHH
Confidence            11234789999999964321   122   234566676654444444433   235678888876543

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=97.02  E-value=0.0036  Score=54.11  Aligned_cols=76  Identities=20%  Similarity=0.275  Sum_probs=49.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHH-cCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc-
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGK-AGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW-  102 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~-~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~-  102 (269)
                      .|+++||+||+|++|...++.+.. .|++|++ +.+++++.+.+ ++   .+.+..   .|-++  ++   .+++.+.. 
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~-~~~~~~~~~~~-~~---lGad~v---i~~~~--~~---~~~v~~~~~  237 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIA-TASRPETQEWV-KS---LGAHHV---IDHSK--PL---AAEVAALGL  237 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEE-ECSSHHHHHHH-HH---TTCSEE---ECTTS--CH---HHHHHTTCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEE-EeCCHHHHHHH-HH---cCCCEE---EeCCC--CH---HHHHHHhcC
Confidence            588999999999999888776655 5888887 46776655433 33   344322   23332  22   23333322 


Q ss_pred             CCccEEEEccC
Q 024338          103 GTVDILINNAG  113 (269)
Q Consensus       103 ~~id~li~~ag  113 (269)
                      +++|++|.++|
T Consensus       238 ~g~Dvvid~~g  248 (363)
T 4dvj_A          238 GAPAFVFSTTH  248 (363)
T ss_dssp             CCEEEEEECSC
T ss_pred             CCceEEEECCC
Confidence            37999999987

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=97.02  E-value=0.006  Score=52.84  Aligned_cols=79  Identities=18%  Similarity=0.305  Sum_probs=51.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-cEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCC-HHHHHHHHHHHHHhc
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGC-KVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK-EADVESMIKTAVDAW  102 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~-~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~-~~~~~~~~~~~~~~~  102 (269)
                      .|+++||+|+ |++|..+++.+...|+ +|++ +.+++++.+.+ ++   .+... +  .|.++ .+++.+.+.++..  
T Consensus       191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~-~~~~~~~~~~~-~~---lGa~~-v--i~~~~~~~~~~~~~~~~~~--  259 (374)
T 2jhf_A          191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIG-VDINKDKFAKA-KE---VGATE-C--VNPQDYKKPIQEVLTEMSN--  259 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEE-ECSCGGGHHHH-HH---TTCSE-E--ECGGGCSSCHHHHHHHHTT--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEE-EcCCHHHHHHH-HH---hCCce-E--ecccccchhHHHHHHHHhC--
Confidence            6799999995 8999999999888999 5666 56777665433 33   34332 2  24332 1223333333322  


Q ss_pred             CCccEEEEccCC
Q 024338          103 GTVDILINNAGI  114 (269)
Q Consensus       103 ~~id~li~~ag~  114 (269)
                      +++|++|.++|.
T Consensus       260 ~g~D~vid~~g~  271 (374)
T 2jhf_A          260 GGVDFSFEVIGR  271 (374)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCcEEEECCCC
Confidence            479999999984

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=97.01  E-value=0.002  Score=55.26  Aligned_cols=101  Identities=23%  Similarity=0.284  Sum_probs=63.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHc--CCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKA--GCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~--G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      .|+++||+|+ |++|...++.+...  |++|++ +.+++++.+.+ +++   +.+. ++  |..+.   ...++++.+ -
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~-~~~~~~~~~~~-~~l---Ga~~-vi--~~~~~---~~~~~~~~~-g  236 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVG-ISRSKKHRDFA-LEL---GADY-VS--EMKDA---ESLINKLTD-G  236 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEE-ECSCHHHHHHH-HHH---TCSE-EE--CHHHH---HHHHHHHHT-T
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEE-EeCCHHHHHHH-HHh---CCCE-Ee--ccccc---hHHHHHhhc-C
Confidence            7899999999 89999999988888  999777 46777665433 333   3322 12  32220   122333332 1


Q ss_pred             CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCc
Q 024338          103 GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVV  165 (269)
Q Consensus       103 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  165 (269)
                      .++|++|.++|..                         ...+..++.+  +++|+++.++...
T Consensus       237 ~g~D~vid~~g~~-------------------------~~~~~~~~~l--~~~G~iv~~g~~~  272 (344)
T 2h6e_A          237 LGASIAIDLVGTE-------------------------ETTYNLGKLL--AQEGAIILVGMEG  272 (344)
T ss_dssp             CCEEEEEESSCCH-------------------------HHHHHHHHHE--EEEEEEEECCCCS
T ss_pred             CCccEEEECCCCh-------------------------HHHHHHHHHh--hcCCEEEEeCCCC
Confidence            2799999999831                         0133444555  4568999887643

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=97.00  E-value=0.0058  Score=52.98  Aligned_cols=79  Identities=18%  Similarity=0.266  Sum_probs=50.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-cEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCC-HHHHHHHHHHHHHhc
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGC-KVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK-EADVESMIKTAVDAW  102 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~-~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~-~~~~~~~~~~~~~~~  102 (269)
                      .|++|||+|+ |++|...++.+...|+ +|++ +.+++++.+.+ ++   .+... +  .|.++ .+++.+.+.++..  
T Consensus       195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~-~~~~~~~~~~a-~~---lGa~~-v--i~~~~~~~~~~~~v~~~~~--  263 (376)
T 1e3i_A          195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIA-IDINGEKFPKA-KA---LGATD-C--LNPRELDKPVQDVITELTA--  263 (376)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEE-ECSCGGGHHHH-HH---TTCSE-E--ECGGGCSSCHHHHHHHHHT--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEE-EcCCHHHHHHH-HH---hCCcE-E--EccccccchHHHHHHHHhC--
Confidence            5899999996 8999999998888999 5666 56776665432 33   34332 2  23332 1223333333332  


Q ss_pred             CCccEEEEccCC
Q 024338          103 GTVDILINNAGI  114 (269)
Q Consensus       103 ~~id~li~~ag~  114 (269)
                      +++|++|.++|.
T Consensus       264 ~g~Dvvid~~G~  275 (376)
T 1e3i_A          264 GGVDYSLDCAGT  275 (376)
T ss_dssp             SCBSEEEESSCC
T ss_pred             CCccEEEECCCC
Confidence            479999999984

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=96.98  E-value=0.0053  Score=52.04  Aligned_cols=116  Identities=22%  Similarity=0.285  Sum_probs=68.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcC--CcEEEEecCCHHHHHHHHHHHHHcCC--cEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           28 VAVVTGASRGIGRAVATSLGKAG--CKVLVNYARSSKEAEEVCKEIEASGG--QALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G--~~v~i~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      .+.|+||+|.+|..++..|+..|  .++++ .++++  .+....++.+...  ++....    ...+.+++++       
T Consensus         2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L-~Di~~--~~~~a~dL~~~~~~~~l~~~~----~t~d~~~a~~-------   67 (314)
T 1mld_A            2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTL-YDIAH--TPGVAADLSHIETRATVKGYL----GPEQLPDCLK-------   67 (314)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEE-EESSS--HHHHHHHHTTSSSSCEEEEEE----SGGGHHHHHT-------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCcEEEE-EeCCc--cHHHHHHHhccCcCceEEEec----CCCCHHHHhC-------
Confidence            48999999999999999999888  56665 56665  2333334433211  122110    0122333333       


Q ss_pred             CccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcc
Q 024338          104 TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVG  166 (269)
Q Consensus       104 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  166 (269)
                      +.|++|+++|......   .+.   .+.+..|+.....+.+.+.++   .+.+.+|++|--..
T Consensus        68 ~aDvVvi~ag~~~~~g---~~r---~dl~~~n~~i~~~i~~~i~~~---~p~a~viv~sNPv~  121 (314)
T 1mld_A           68 GCDVVVIPAGVPRKPG---MTR---DDLFNTNATIVATLTAACAQH---CPDAMICIISNPVN  121 (314)
T ss_dssp             TCSEEEECCSCCCCTT---CCG---GGGHHHHHHHHHHHHHHHHHH---CTTSEEEECSSCHH
T ss_pred             CCCEEEECCCcCCCCC---CcH---HHHHHHHHHHHHHHHHHHHhh---CCCeEEEEECCCcc
Confidence            8899999999753221   121   124666766655555555442   46678888766544

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=96.98  E-value=0.003  Score=54.78  Aligned_cols=79  Identities=22%  Similarity=0.306  Sum_probs=50.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-cEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCC-HHHHHHHHHHHHHhc
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGC-KVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK-EADVESMIKTAVDAW  102 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~-~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~-~~~~~~~~~~~~~~~  102 (269)
                      .|+++||+|+ |++|...++.+...|+ .|++ +.+++++.+. ++++   +... +  .|.++ .+++.+.+.++..  
T Consensus       190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~-~~~~~~~~~~-~~~l---Ga~~-v--i~~~~~~~~~~~~v~~~~~--  258 (373)
T 2fzw_A          190 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIG-VDINKDKFAR-AKEF---GATE-C--INPQDFSKPIQEVLIEMTD--  258 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEE-ECSCGGGHHH-HHHH---TCSE-E--ECGGGCSSCHHHHHHHHTT--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEE-EcCCHHHHHH-HHHc---CCce-E--eccccccccHHHHHHHHhC--
Confidence            6899999996 8999999998888999 5666 5667666543 3333   3332 2  23332 1223333333322  


Q ss_pred             CCccEEEEccCC
Q 024338          103 GTVDILINNAGI  114 (269)
Q Consensus       103 ~~id~li~~ag~  114 (269)
                      +++|++|.++|.
T Consensus       259 ~g~D~vid~~g~  270 (373)
T 2fzw_A          259 GGVDYSFECIGN  270 (373)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCCEEEECCCc
Confidence            479999999983

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=96.96  E-value=0.0025  Score=55.25  Aligned_cols=74  Identities=16%  Similarity=0.291  Sum_probs=50.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      .|.++||+|+ |++|...++.+...|++|++ +.+++++.+.+ +++   +...   ..|..+.+.++    ++.   ++
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~-~~~~~~~~~~a-~~l---Ga~~---vi~~~~~~~~~----~~~---~g  257 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVA-FTTSEAKREAA-KAL---GADE---VVNSRNADEMA----AHL---KS  257 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEE-EESSGGGHHHH-HHH---TCSE---EEETTCHHHHH----TTT---TC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEE-EeCCHHHHHHH-HHc---CCcE---EeccccHHHHH----Hhh---cC
Confidence            5899999998 89999999988889999777 46666655433 333   3332   23555543222    221   48


Q ss_pred             ccEEEEccCC
Q 024338          105 VDILINNAGI  114 (269)
Q Consensus       105 id~li~~ag~  114 (269)
                      +|++|.++|.
T Consensus       258 ~Dvvid~~g~  267 (369)
T 1uuf_A          258 FDFILNTVAA  267 (369)
T ss_dssp             EEEEEECCSS
T ss_pred             CCEEEECCCC
Confidence            9999999985

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.95  E-value=0.0046  Score=51.17  Aligned_cols=43  Identities=33%  Similarity=0.390  Sum_probs=37.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHH
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEI   71 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l   71 (269)
                      +|+++|+|+ ||.|++++..|++.|.++.+ ..|+.++.+++. ++
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V-~nRt~~ka~~la-~~  160 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSV-LNRSSRGLDFFQ-RL  160 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEE-ECSSCTTHHHHH-HH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHH-HC
Confidence            899999997 89999999999999977777 689988888777 54

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=96.94  E-value=0.0036  Score=51.34  Aligned_cols=83  Identities=14%  Similarity=0.230  Sum_probs=57.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCH-------------------HHHHHHHHHHHHcC--CcEEE
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSS-------------------KEAEEVCKEIEASG--GQALT   80 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~-------------------~~~~~~~~~l~~~~--~~~~~   80 (269)
                      ..+++++|+|.|+ ||+|.++++.|+..|...+.+++.+.                   .+.+.+.+.+++..  .++..
T Consensus        24 ~~l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~  102 (251)
T 1zud_1           24 QKLLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTA  102 (251)
T ss_dssp             HHHHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEE
T ss_pred             HHHhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEE
Confidence            4567899999998 58999999999999986555454432                   45666777776654  34555


Q ss_pred             EEccCCCHHHHHHHHHHHHHhcCCccEEEEccC
Q 024338           81 FGGDVSKEADVESMIKTAVDAWGTVDILINNAG  113 (269)
Q Consensus        81 ~~~Dls~~~~~~~~~~~~~~~~~~id~li~~ag  113 (269)
                      +..+++. +.+.+++.       ..|+||++..
T Consensus       103 ~~~~~~~-~~~~~~~~-------~~DvVi~~~d  127 (251)
T 1zud_1          103 LQQRLTG-EALKDAVA-------RADVVLDCTD  127 (251)
T ss_dssp             ECSCCCH-HHHHHHHH-------HCSEEEECCS
T ss_pred             EeccCCH-HHHHHHHh-------cCCEEEECCC
Confidence            5555653 44444443       5799998753

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=96.92  E-value=0.0013  Score=56.35  Aligned_cols=118  Identities=19%  Similarity=0.217  Sum_probs=68.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC--c-----EEEEecCCH--HHHHHHHHHHHHcC-CcEEEEEccCCCHHHHHHHHH
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGC--K-----VLVNYARSS--KEAEEVCKEIEASG-GQALTFGGDVSKEADVESMIK   96 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~--~-----v~i~~~r~~--~~~~~~~~~l~~~~-~~~~~~~~Dls~~~~~~~~~~   96 (269)
                      ..|+||||+|.+|..++..|+..|.  +     +++ .+.++  +.++-...++.... .-...+.  .++  ...+   
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L-~Di~~~~~~~~g~a~DL~~~~~~~~~~~~--~~~--~~~~---   75 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVL-LDITPMMGVLDGVLMELQDCALPLLKDVI--ATD--KEEI---   75 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEE-ECCGGGHHHHHHHHHHHHHTCCTTEEEEE--EES--CHHH---
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEE-EeCCCccccchhhHhhhHhhhhcccCCEE--EcC--CcHH---
Confidence            4699999999999999999998875  3     555 46653  34555555565432 2121111  111  1112   


Q ss_pred             HHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCC-eEEEEcCCc
Q 024338           97 TAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKG-RIINIASVV  165 (269)
Q Consensus        97 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~-~iv~isS~~  165 (269)
                          .+.+.|++|+.||......   .   .-.+.++.|......+.+.+..+   ..++ +++++|.-.
T Consensus        76 ----~~~daDvVvitAg~prkpG---~---tR~dll~~N~~i~~~i~~~i~~~---~~~~~~vivvsNPv  132 (333)
T 5mdh_A           76 ----AFKDLDVAILVGSMPRRDG---M---ERKDLLKANVKIFKCQGAALDKY---AKKSVKVIVVGNPA  132 (333)
T ss_dssp             ----HTTTCSEEEECCSCCCCTT---C---CTTTTHHHHHHHHHHHHHHHHHH---SCTTCEEEECSSSH
T ss_pred             ----HhCCCCEEEEeCCCCCCCC---C---CHHHHHHHHHHHHHHHHHHHHHh---CCCCeEEEEcCCch
Confidence                2237899999998643211   1   22345677777644444444332   3455 588877643

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=96.92  E-value=0.0089  Score=50.86  Aligned_cols=116  Identities=12%  Similarity=0.179  Sum_probs=65.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC--cEEEEecCCHHHHHHHHHHHHHcC---CcEEEEEccCCCHHHHHHHHHHH
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGC--KVLVNYARSSKEAEEVCKEIEASG---GQALTFGGDVSKEADVESMIKTA   98 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~--~v~i~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dls~~~~~~~~~~~~   98 (269)
                      .+++.+.|+|+ |.+|.+++..|+..|.  ++++ .+++++.++....++....   ..+.+...|              
T Consensus         7 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l-~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~--------------   70 (326)
T 3vku_A            7 KDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGI-VDIFKDKTKGDAIDLEDALPFTSPKKIYSAE--------------   70 (326)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEE-ECSCHHHHHHHHHHHHTTGGGSCCCEEEECC--------------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEE-EeCChHHHHHHHhhHhhhhhhcCCcEEEECc--------------
Confidence            34678999997 9999999999999986  5555 6888887776666665431   122222211              


Q ss_pred             HHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-CCCCeEEEEcCCc
Q 024338           99 VDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMK-KKKGRIINIASVV  165 (269)
Q Consensus        99 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~iv~isS~~  165 (269)
                      .+.+...|++|.+||....      +.+.-.+.++.|.--    .+.+.+.+.+ .+++.++++|.-.
T Consensus        71 ~~a~~~aDiVvi~ag~~~k------pG~tR~dL~~~N~~I----~~~i~~~i~~~~p~a~ilvvtNPv  128 (326)
T 3vku_A           71 YSDAKDADLVVITAGAPQK------PGETRLDLVNKNLKI----LKSIVDPIVDSGFNGIFLVAANPV  128 (326)
T ss_dssp             GGGGTTCSEEEECCCCC----------------------C----HHHHHHHHHTTTCCSEEEECSSSH
T ss_pred             HHHhcCCCEEEECCCCCCC------CCchHHHHHHHHHHH----HHHHHHHHHhcCCceEEEEccCch
Confidence            1223478999999996422      112234455666554    4444444433 3567788887644

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=96.90  E-value=0.0011  Score=52.58  Aligned_cols=43  Identities=23%  Similarity=0.402  Sum_probs=36.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHH
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEI   71 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l   71 (269)
                      +++|+||+|.+|.++++.|+++|++|.+ ..|+++..+++.+.+
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~-~~r~~~~~~~~~~~~   44 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVV-GSRREEKAEAKAAEY   44 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEE-EESSHHHHHHHHHHH
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHh
Confidence            5889999999999999999999999887 578887776665543

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=96.88  E-value=0.0038  Score=54.15  Aligned_cols=78  Identities=13%  Similarity=0.124  Sum_probs=51.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc-
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW-  102 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~-  102 (269)
                      -.|++|||+|++|++|...++.....|++|+.+ . ++++.+ ++++   .+... +  .|..+.+ +.   +++.+.. 
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~-~-~~~~~~-~~~~---lGa~~-v--i~~~~~~-~~---~~v~~~t~  229 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIAT-C-SPHNFD-LAKS---RGAEE-V--FDYRAPN-LA---QTIRTYTK  229 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEE-E-CGGGHH-HHHH---TTCSE-E--EETTSTT-HH---HHHHHHTT
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEE-e-CHHHHH-HHHH---cCCcE-E--EECCCch-HH---HHHHHHcc
Confidence            468999999999999999999999999998875 3 444443 3333   34332 2  2444432 22   2333322 


Q ss_pred             CCccEEEEccCC
Q 024338          103 GTVDILINNAGI  114 (269)
Q Consensus       103 ~~id~li~~ag~  114 (269)
                      +++|++|.++|.
T Consensus       230 g~~d~v~d~~g~  241 (371)
T 3gqv_A          230 NNLRYALDCITN  241 (371)
T ss_dssp             TCCCEEEESSCS
T ss_pred             CCccEEEECCCc
Confidence            469999999983

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=96.86  E-value=0.00025  Score=59.14  Aligned_cols=45  Identities=20%  Similarity=0.260  Sum_probs=37.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC-cEEEEecCCHHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGC-KVLVNYARSSKEAEEVC   68 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~-~v~i~~~r~~~~~~~~~   68 (269)
                      .++++|+++|+|+ ||.|++++..|++.|+ +|.+ +.|+.++.+++.
T Consensus       113 ~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v-~~R~~~~a~~la  158 (277)
T 3don_A          113 EGIEDAYILILGA-GGASKGIANELYKIVRPTLTV-ANRTMSRFNNWS  158 (277)
T ss_dssp             TTGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEE-ECSCGGGGTTCC
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEE-EeCCHHHHHHHH
Confidence            4578999999997 7999999999999998 6776 688887665544

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=96.85  E-value=0.0041  Score=53.16  Aligned_cols=102  Identities=12%  Similarity=0.108  Sum_probs=65.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      -.|+++||+|+ |++|...++.+...|++|++ +.+++++.+. +++   .+.+..   .|..+.+..+    ++.+..+
T Consensus       165 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~-~~~~~~~~~~-~~~---lGa~~~---i~~~~~~~~~----~~~~~~g  231 (340)
T 3s2e_A          165 RPGQWVVISGI-GGLGHVAVQYARAMGLRVAA-VDIDDAKLNL-ARR---LGAEVA---VNARDTDPAA----WLQKEIG  231 (340)
T ss_dssp             CTTSEEEEECC-STTHHHHHHHHHHTTCEEEE-EESCHHHHHH-HHH---TTCSEE---EETTTSCHHH----HHHHHHS
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCeEEE-EeCCHHHHHH-HHH---cCCCEE---EeCCCcCHHH----HHHHhCC
Confidence            46899999997 89999999999899999887 4677766553 333   344332   2444433222    2333346


Q ss_pred             CccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCc
Q 024338          104 TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVV  165 (269)
Q Consensus       104 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  165 (269)
                      ++|++|.++|..          +               ..+.+++.+  ++.|+++.++...
T Consensus       232 ~~d~vid~~g~~----------~---------------~~~~~~~~l--~~~G~iv~~G~~~  266 (340)
T 3s2e_A          232 GAHGVLVTAVSP----------K---------------AFSQAIGMV--RRGGTIALNGLPP  266 (340)
T ss_dssp             SEEEEEESSCCH----------H---------------HHHHHHHHE--EEEEEEEECSCCS
T ss_pred             CCCEEEEeCCCH----------H---------------HHHHHHHHh--ccCCEEEEeCCCC
Confidence            899999998721          1               133344444  5678999887543

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=96.85  E-value=0.026  Score=47.73  Aligned_cols=118  Identities=18%  Similarity=0.196  Sum_probs=71.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC-cEEEEecCC--HHHHHHHHHHHHHc------CCcEEEEEccCCCHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGC-KVLVNYARS--SKEAEEVCKEIEAS------GGQALTFGGDVSKEADVE   92 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~-~v~i~~~r~--~~~~~~~~~~l~~~------~~~~~~~~~Dls~~~~~~   92 (269)
                      |.++.+.+.|+|+ |.+|..++..++..|. ++++ .+++  ++..+....++...      ..++... .|   .    
T Consensus         4 m~~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l-~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t-~d---~----   73 (315)
T 3tl2_A            4 MTIKRKKVSVIGA-GFTGATTAFLLAQKELADVVL-VDIPQLENPTKGKALDMLEASPVQGFDANIIGT-SD---Y----   73 (315)
T ss_dssp             CCCCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEE-ECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEE-SC---G----
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEE-EeccchHHHHHHhhhhHHHhhhhccCCCEEEEc-CC---H----
Confidence            3446788999997 9999999999999998 7776 5777  44444333333221      1222211 11   1    


Q ss_pred             HHHHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCc
Q 024338           93 SMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVV  165 (269)
Q Consensus        93 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  165 (269)
                             +.+...|++|.++|.....   ..+.   .+.++.|..-...+.+.+..+   .+.+.++++|-..
T Consensus        74 -------~a~~~aDvVIiaag~p~kp---g~~R---~dl~~~N~~i~~~i~~~i~~~---~p~a~vlvvsNPv  130 (315)
T 3tl2_A           74 -------ADTADSDVVVITAGIARKP---GMSR---DDLVATNSKIMKSITRDIAKH---SPNAIIVVLTNPV  130 (315)
T ss_dssp             -------GGGTTCSEEEECCSCCCCT---TCCH---HHHHHHHHHHHHHHHHHHHHH---CTTCEEEECCSSH
T ss_pred             -------HHhCCCCEEEEeCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHHh---CCCeEEEECCChH
Confidence                   2334799999999975321   1232   445666666544444444432   4667888887543

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=96.82  E-value=0.013  Score=50.79  Aligned_cols=84  Identities=25%  Similarity=0.274  Sum_probs=55.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccC-----------CCHHHHH
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDV-----------SKEADVE   92 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl-----------s~~~~~~   92 (269)
                      +++++++|+|+ |.+|..+++.+...|++|++ ++++.+.++.+.+ +   +.+  ++..|+           ...+...
T Consensus       182 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v-~D~~~~~l~~~~~-l---Ga~--~~~l~~~~~~~~gya~~~~~~~~~  253 (381)
T 3p2y_A          182 VKPASALVLGV-GVAGLQALATAKRLGAKTTG-YDVRPEVAEQVRS-V---GAQ--WLDLGIDAAGEGGYARELSEAERA  253 (381)
T ss_dssp             ECCCEEEEESC-SHHHHHHHHHHHHHTCEEEE-ECSSGGGHHHHHH-T---TCE--ECCCC-------------CHHHHH
T ss_pred             cCCCEEEEECc-hHHHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHH-c---CCe--EEeccccccccccchhhhhHHHHh
Confidence            47899999999 79999999999999999888 5788776655433 2   332  222221           0011122


Q ss_pred             HHHHHHHHhcCCccEEEEccCCC
Q 024338           93 SMIKTAVDAWGTVDILINNAGIT  115 (269)
Q Consensus        93 ~~~~~~~~~~~~id~li~~ag~~  115 (269)
                      .-...+.+.....|++|.++...
T Consensus       254 ~~~~~l~e~l~~aDIVI~tv~iP  276 (381)
T 3p2y_A          254 QQQQALEDAITKFDIVITTALVP  276 (381)
T ss_dssp             HHHHHHHHHHTTCSEEEECCCCT
T ss_pred             hhHHHHHHHHhcCCEEEECCCCC
Confidence            33344555556899999987654

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=96.72  E-value=0.0013  Score=56.05  Aligned_cols=75  Identities=19%  Similarity=0.221  Sum_probs=46.5

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCccE
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDI  107 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~  107 (269)
                      ++||+|++|++|..+++.+...|++|+++ .+++++.+.+ ++   .+.+..   .|.++.+  .+.+.++.  .+++|+
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~-~~~~~~~~~~-~~---lGa~~~---i~~~~~~--~~~~~~~~--~~~~d~  219 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEAS-TGKAAEHDYL-RV---LGAKEV---LAREDVM--AERIRPLD--KQRWAA  219 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEE-ESCTTCHHHH-HH---TTCSEE---EECC-----------CC--SCCEEE
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEE-ECCHHHHHHH-HH---cCCcEE---EecCCcH--HHHHHHhc--CCcccE
Confidence            79999999999999999999999998875 5555544332 22   343322   2444332  12222221  136999


Q ss_pred             EEEccCC
Q 024338          108 LINNAGI  114 (269)
Q Consensus       108 li~~ag~  114 (269)
                      +|.++|.
T Consensus       220 vid~~g~  226 (328)
T 1xa0_A          220 AVDPVGG  226 (328)
T ss_dssp             EEECSTT
T ss_pred             EEECCcH
Confidence            9999984

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=96.69  E-value=0.0025  Score=51.40  Aligned_cols=72  Identities=13%  Similarity=0.082  Sum_probs=52.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTV  105 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i  105 (269)
                      .+.++|.|+ |.+|..+++.|.++|+ |++ +.++++..+.+.       ..+.++.+|.++.+.++++      ...+.
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~v-id~~~~~~~~~~-------~~~~~i~gd~~~~~~l~~a------~i~~a   72 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVL-AEDENVRKKVLR-------SGANFVHGDPTRVSDLEKA------NVRGA   72 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEE-ESCGGGHHHHHH-------TTCEEEESCTTCHHHHHHT------TCTTC
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEE-EECCHHHHHHHh-------cCCeEEEcCCCCHHHHHhc------Ccchh
Confidence            467899998 8999999999999998 777 578877654432       2367789999998765543      12367


Q ss_pred             cEEEEccC
Q 024338          106 DILINNAG  113 (269)
Q Consensus       106 d~li~~ag  113 (269)
                      |.+|.+.+
T Consensus        73 d~vi~~~~   80 (234)
T 2aef_A           73 RAVIVDLE   80 (234)
T ss_dssp             SEEEECCS
T ss_pred             cEEEEcCC
Confidence            88887654

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=96.68  E-value=0.015  Score=49.57  Aligned_cols=81  Identities=20%  Similarity=0.267  Sum_probs=52.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      ...|+++||+|+ |++|...+..+...|+.+++.+++++++++ +++++   +.... +  |.++.+ ..+...++.+ .
T Consensus       158 ~~~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~~-~a~~l---Ga~~~-i--~~~~~~-~~~~~~~~~~-~  227 (346)
T 4a2c_A          158 GCENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLA-LAKSF---GAMQT-F--NSSEMS-APQMQSVLRE-L  227 (346)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHH-HHHHT---TCSEE-E--ETTTSC-HHHHHHHHGG-G
T ss_pred             cCCCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHHHH-HHHHc---CCeEE-E--eCCCCC-HHHHHHhhcc-c
Confidence            357899999987 899999999888999998776777776654 33333   44332 2  333222 2223333322 2


Q ss_pred             CCccEEEEccC
Q 024338          103 GTVDILINNAG  113 (269)
Q Consensus       103 ~~id~li~~ag  113 (269)
                      ...|+++.++|
T Consensus       228 ~g~d~v~d~~G  238 (346)
T 4a2c_A          228 RFNQLILETAG  238 (346)
T ss_dssp             CSSEEEEECSC
T ss_pred             CCccccccccc
Confidence            46899999987

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=96.67  E-value=0.023  Score=48.47  Aligned_cols=120  Identities=11%  Similarity=0.135  Sum_probs=74.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC--cEEEEecCCHHHHHHHHHHHHHcC---CcEEEEEccCCCHHHHHHHHHH
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGC--KVLVNYARSSKEAEEVCKEIEASG---GQALTFGGDVSKEADVESMIKT   97 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~--~v~i~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dls~~~~~~~~~~~   97 (269)
                      ..+.+.+.|+|+ |.+|..++..|+.+|.  ++++ .+.+.+.++....++....   .....+..+  |.         
T Consensus        16 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L-~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~--d~---------   82 (331)
T 4aj2_A           16 QVPQNKITVVGV-GAVGMACAISILMKDLADELAL-VDVIEDKLKGEMMDLQHGSLFLKTPKIVSSK--DY---------   82 (331)
T ss_dssp             -CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEE-ECSCHHHHHHHHHHHHHTGGGCSCCEEEECS--SG---------
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEE-EeCChHHHHHHHHhhhhhhhccCCCeEEEcC--CH---------
Confidence            456688999998 8999999999999986  5555 6888887777666665431   111122111  21         


Q ss_pred             HHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcc
Q 024338           98 AVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVG  166 (269)
Q Consensus        98 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  166 (269)
                        +.+...|++|.+||.....   ..+.   .+.++.|.--...+.+.+..+   .+.+.++++|....
T Consensus        83 --~~~~~aDiVvi~aG~~~kp---G~tR---~dL~~~N~~I~~~i~~~i~~~---~p~a~vlvvtNPvd  140 (331)
T 4aj2_A           83 --SVTANSKLVIITAGARQQE---GESR---LNLVQRNVNIFKFIIPNVVKY---SPQCKLLIVSNPVD  140 (331)
T ss_dssp             --GGGTTEEEEEECCSCCCCT---TCCG---GGGHHHHHHHHHHHHHHHHHH---CTTCEEEECSSSHH
T ss_pred             --HHhCCCCEEEEccCCCCCC---CccH---HHHHHHHHHHHHHHHHHHHHH---CCCeEEEEecChHH
Confidence              1123789999999975321   1222   245666665544444444432   46678888886543

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=96.64  E-value=0.0082  Score=51.74  Aligned_cols=77  Identities=13%  Similarity=0.236  Sum_probs=51.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHc-CCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKA-GCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~-G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      .|++|||+|+ |++|...++.+... |++|++ +.+++++.+.+ ++   .+.+. +  .|..+.  +.+.+.++..  +
T Consensus       186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~-~~~~~~~~~~~-~~---lGa~~-v--i~~~~~--~~~~v~~~~~--g  252 (359)
T 1h2b_A          186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIA-LDVKEEKLKLA-ER---LGADH-V--VDARRD--PVKQVMELTR--G  252 (359)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEE-EESSHHHHHHH-HH---TTCSE-E--EETTSC--HHHHHHHHTT--T
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEE-EeCCHHHHHHH-HH---hCCCE-E--Eeccch--HHHHHHHHhC--C
Confidence            6899999999 89999999888888 998777 46676655433 33   34332 1  244442  3333333321  3


Q ss_pred             -CccEEEEccCC
Q 024338          104 -TVDILINNAGI  114 (269)
Q Consensus       104 -~id~li~~ag~  114 (269)
                       ++|++|.++|.
T Consensus       253 ~g~Dvvid~~G~  264 (359)
T 1h2b_A          253 RGVNVAMDFVGS  264 (359)
T ss_dssp             CCEEEEEESSCC
T ss_pred             CCCcEEEECCCC
Confidence             69999999983

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=96.64  E-value=0.0065  Score=52.62  Aligned_cols=79  Identities=18%  Similarity=0.289  Sum_probs=50.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-cEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCC-HHHHHHHHHHHHHhc
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGC-KVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK-EADVESMIKTAVDAW  102 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~-~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~-~~~~~~~~~~~~~~~  102 (269)
                      .|++|||+|+ |++|...++.+...|+ +|++ +.+++++.+. +++   .+.+. ++  |..+ .+++.+.+.++..  
T Consensus       191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~-~~~~~~~~~~-a~~---lGa~~-vi--~~~~~~~~~~~~i~~~t~--  259 (373)
T 1p0f_A          191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIG-VGTHKDKFPK-AIE---LGATE-CL--NPKDYDKPIYEVICEKTN--  259 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEE-ECSCGGGHHH-HHH---TTCSE-EE--CGGGCSSCHHHHHHHHTT--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEE-ECCCHHHHHH-HHH---cCCcE-EE--ecccccchHHHHHHHHhC--
Confidence            5899999996 8999999988888899 5666 5667665543 233   34432 22  3322 1223333333322  


Q ss_pred             CCccEEEEccCC
Q 024338          103 GTVDILINNAGI  114 (269)
Q Consensus       103 ~~id~li~~ag~  114 (269)
                      +++|++|.++|.
T Consensus       260 gg~Dvvid~~g~  271 (373)
T 1p0f_A          260 GGVDYAVECAGR  271 (373)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999983

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=96.56  E-value=0.0082  Score=51.24  Aligned_cols=91  Identities=13%  Similarity=0.069  Sum_probs=56.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCH-------------------HHHHHHHHHHHHcCCc--EEE
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSS-------------------KEAEEVCKEIEASGGQ--ALT   80 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~-------------------~~~~~~~~~l~~~~~~--~~~   80 (269)
                      ..+++++|+|.|++ |+|.++++.|+..|..-+.+++++.                   .+.+.+.+.+++....  +..
T Consensus        30 ~kL~~~~VlIvGaG-GlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~v~~  108 (340)
T 3rui_A           30 DIIKNTKVLLLGAG-TLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATG  108 (340)
T ss_dssp             HHHHTCEEEEECCS-HHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEE
T ss_pred             HHHhCCEEEEECCC-HHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCEEEE
Confidence            35778999999985 9999999999999987665555532                   3556666777665544  444


Q ss_pred             EEccC-------CCHHHHHHHHHHHHHhcCCccEEEEccC
Q 024338           81 FGGDV-------SKEADVESMIKTAVDAWGTVDILINNAG  113 (269)
Q Consensus        81 ~~~Dl-------s~~~~~~~~~~~~~~~~~~id~li~~ag  113 (269)
                      +..++       ++++....-.+.+.+.+...|+||++..
T Consensus       109 ~~~~i~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~tD  148 (340)
T 3rui_A          109 VKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVD  148 (340)
T ss_dssp             ECCCCCCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECCS
T ss_pred             EeccccccCcccchhhhhcCCHHHHHhhhccCCEEEecCC
Confidence            54444       2221111111112222236799998764

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.55  E-value=0.0062  Score=51.59  Aligned_cols=74  Identities=18%  Similarity=0.285  Sum_probs=50.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      -.|+++||+||+|++|...++.+...|++|+.+ .+ .++ .++++++   +... +  .|..+.+.+.+       ...
T Consensus       151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~-~~-~~~-~~~~~~l---Ga~~-~--i~~~~~~~~~~-------~~~  214 (321)
T 3tqh_A          151 KQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITT-AS-KRN-HAFLKAL---GAEQ-C--INYHEEDFLLA-------IST  214 (321)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEE-EC-HHH-HHHHHHH---TCSE-E--EETTTSCHHHH-------CCS
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEE-ec-cch-HHHHHHc---CCCE-E--EeCCCcchhhh-------hcc
Confidence            468999999999999999999999999998875 43 333 3344443   4432 2  24443331221       224


Q ss_pred             CccEEEEccC
Q 024338          104 TVDILINNAG  113 (269)
Q Consensus       104 ~id~li~~ag  113 (269)
                      ++|++|.+.|
T Consensus       215 g~D~v~d~~g  224 (321)
T 3tqh_A          215 PVDAVIDLVG  224 (321)
T ss_dssp             CEEEEEESSC
T ss_pred             CCCEEEECCC
Confidence            7999999998

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=96.54  E-value=0.0028  Score=54.60  Aligned_cols=37  Identities=14%  Similarity=0.235  Sum_probs=31.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCH
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSS   61 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~   61 (269)
                      .|++|||+||+|++|...++.....|+++++++++++
T Consensus       167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~  203 (357)
T 1zsy_A          167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRP  203 (357)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCS
T ss_pred             CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCcc
Confidence            6899999999999999999888888999888665543

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=96.53  E-value=0.014  Score=50.99  Aligned_cols=44  Identities=23%  Similarity=0.203  Sum_probs=36.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHH
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVC   68 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~   68 (269)
                      .+++.+|+|+|+ |.+|..+++.+...|++|++ ++++...++.+.
T Consensus       187 ~v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v-~D~~~~~l~~~~  230 (405)
T 4dio_A          187 TVPAAKIFVMGA-GVAGLQAIATARRLGAVVSA-TDVRPAAKEQVA  230 (405)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEE-ECSSTTHHHHHH
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEE-EcCCHHHHHHHH
Confidence            357899999999 79999999999999999888 577776665443

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=96.48  E-value=0.008  Score=52.40  Aligned_cols=43  Identities=19%  Similarity=0.217  Sum_probs=35.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHH
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEV   67 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~   67 (269)
                      .+.+++++|+|+ |++|..+++.+...|++|++ ..+++..++..
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~-~d~~~~~~~~~  211 (384)
T 1l7d_A          169 TVPPARVLVFGV-GVAGLQAIATAKRLGAVVMA-TDVRAATKEQV  211 (384)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEE-ECSCSTTHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEE-EeCCHHHHHHH
Confidence            568999999996 89999999999999999777 57766555443

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=96.47  E-value=0.0045  Score=53.18  Aligned_cols=102  Identities=15%  Similarity=0.211  Sum_probs=64.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-cEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGC-KVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~-~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      -.|+++||+|+ |++|...++.....|+ +|++ +.+++++++ +++++   +.+. ++  |.++.+    +.+++.+..
T Consensus       165 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~-~~~~~~~~~-~~~~l---Ga~~-vi--~~~~~~----~~~~v~~~t  231 (352)
T 3fpc_A          165 KLGDTVCVIGI-GPVGLMSVAGANHLGAGRIFA-VGSRKHCCD-IALEY---GATD-II--NYKNGD----IVEQILKAT  231 (352)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHTTTCSSEEE-ECCCHHHHH-HHHHH---TCCE-EE--CGGGSC----HHHHHHHHT
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEE-ECCCHHHHH-HHHHh---CCce-EE--cCCCcC----HHHHHHHHc
Confidence            35899999996 8999999988888999 6776 577766554 44444   3332 22  333222    233344433


Q ss_pred             C--CccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCc
Q 024338          103 G--TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVV  165 (269)
Q Consensus       103 ~--~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  165 (269)
                      +  ++|++|.++|...                         ..+..++.+  +++|+++.++...
T Consensus       232 ~g~g~D~v~d~~g~~~-------------------------~~~~~~~~l--~~~G~~v~~G~~~  269 (352)
T 3fpc_A          232 DGKGVDKVVIAGGDVH-------------------------TFAQAVKMI--KPGSDIGNVNYLG  269 (352)
T ss_dssp             TTCCEEEEEECSSCTT-------------------------HHHHHHHHE--EEEEEEEECCCCC
T ss_pred             CCCCCCEEEECCCChH-------------------------HHHHHHHHH--hcCCEEEEecccC
Confidence            2  5999999988421                         133344444  5678999887543

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=96.46  E-value=0.01  Score=51.57  Aligned_cols=81  Identities=19%  Similarity=0.242  Sum_probs=52.3

Q ss_pred             CCCCEEEEeC-CCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           24 VEAPVAVVTG-ASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        24 ~~~k~vlItG-as~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      -.|.++||.| |+|++|...++.+...|++|+++ .+++++.+.+ ++   .+.+..   .|-.+.+ +.+.+.++... 
T Consensus       169 ~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~-~~~~~~~~~~-~~---lGa~~~---~~~~~~~-~~~~v~~~t~~-  238 (379)
T 3iup_A          169 LEGHSALVHTAAASNLGQMLNQICLKDGIKLVNI-VRKQEQADLL-KA---QGAVHV---CNAASPT-FMQDLTEALVS-  238 (379)
T ss_dssp             HTTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEE-ESSHHHHHHH-HH---TTCSCE---EETTSTT-HHHHHHHHHHH-
T ss_pred             cCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEE-ECCHHHHHHH-Hh---CCCcEE---EeCCChH-HHHHHHHHhcC-
Confidence            3578999997 89999999999888899998884 6676665433 33   343321   2333322 22223222221 


Q ss_pred             CCccEEEEccCC
Q 024338          103 GTVDILINNAGI  114 (269)
Q Consensus       103 ~~id~li~~ag~  114 (269)
                      .++|++|.++|.
T Consensus       239 ~g~d~v~d~~g~  250 (379)
T 3iup_A          239 TGATIAFDATGG  250 (379)
T ss_dssp             HCCCEEEESCEE
T ss_pred             CCceEEEECCCc
Confidence            269999999984

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=96.43  E-value=0.026  Score=47.91  Aligned_cols=117  Identities=18%  Similarity=0.214  Sum_probs=68.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-cEEEEecCCHHHHHHHHHHHHHc------CCcEEEEEccCCCHHHHHHHHH
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGC-KVLVNYARSSKEAEEVCKEIEAS------GGQALTFGGDVSKEADVESMIK   96 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~-~v~i~~~r~~~~~~~~~~~l~~~------~~~~~~~~~Dls~~~~~~~~~~   96 (269)
                      ++.+.+.|+|+ |.+|.+++..|+..|. ++++ .+++++..+....++...      ..++.. ..|.           
T Consensus         5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L-~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-t~d~-----------   70 (324)
T 3gvi_A            5 MARNKIALIGS-GMIGGTLAHLAGLKELGDVVL-FDIAEGTPQGKGLDIAESSPVDGFDAKFTG-ANDY-----------   70 (324)
T ss_dssp             -CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEE-ECSSSSHHHHHHHHHHHHHHHHTCCCCEEE-ESSG-----------
T ss_pred             CcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEE-EeCCchhHHHHHHHHhchhhhcCCCCEEEE-eCCH-----------
Confidence            34567999998 9999999999999998 7666 577776655444444321      222221 1221           


Q ss_pred             HHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcc
Q 024338           97 TAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVG  166 (269)
Q Consensus        97 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  166 (269)
                         +.+..-|++|.++|......      ..-.+.+..|..-...+.+.+..+   .+.+.++++|.-..
T Consensus        71 ---~a~~~aDiVIiaag~p~k~G------~~R~dl~~~N~~i~~~i~~~i~~~---~p~a~iivvtNPvd  128 (324)
T 3gvi_A           71 ---AAIEGADVVIVTAGVPRKPG------MSRDDLLGINLKVMEQVGAGIKKY---APEAFVICITNPLD  128 (324)
T ss_dssp             ---GGGTTCSEEEECCSCCCC-----------CHHHHHHHHHHHHHHHHHHHH---CTTCEEEECCSSHH
T ss_pred             ---HHHCCCCEEEEccCcCCCCC------CCHHHHHHhhHHHHHHHHHHHHHH---CCCeEEEecCCCcH
Confidence               12237899999998643211      122234555655544444443332   46678888876543

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=96.43  E-value=0.0044  Score=53.41  Aligned_cols=75  Identities=20%  Similarity=0.224  Sum_probs=50.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      .|+++||+|+ |++|...++.+...|++|+++ .+++++.+.+.++   .+.+. +  .|..+.+.+       .+..++
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~-~~~~~~~~~~~~~---lGa~~-v--i~~~~~~~~-------~~~~~g  244 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVI-SSSNKKREEALQD---LGADD-Y--VIGSDQAKM-------SELADS  244 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEE-ESSTTHHHHHHTT---SCCSC-E--EETTCHHHH-------HHSTTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEE-eCChHHHHHHHHH---cCCce-e--eccccHHHH-------HHhcCC
Confidence            6899999995 999999999888899998774 5665555433322   23322 1  244443322       222347


Q ss_pred             ccEEEEccCC
Q 024338          105 VDILINNAGI  114 (269)
Q Consensus       105 id~li~~ag~  114 (269)
                      +|++|.++|.
T Consensus       245 ~D~vid~~g~  254 (357)
T 2cf5_A          245 LDYVIDTVPV  254 (357)
T ss_dssp             EEEEEECCCS
T ss_pred             CCEEEECCCC
Confidence            9999999985

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=96.31  E-value=0.0039  Score=51.98  Aligned_cols=47  Identities=26%  Similarity=0.390  Sum_probs=39.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC-cEEEEecCCHHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGC-KVLVNYARSSKEAEEVCKE   70 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~-~v~i~~~r~~~~~~~~~~~   70 (269)
                      .++++|+++|+|+ ||.|++++..|++.|+ ++.+ +.|+.++.+++.+.
T Consensus       118 ~~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v-~nRt~~ka~~La~~  165 (282)
T 3fbt_A          118 VEIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYV-VTRNPEKTSEIYGE  165 (282)
T ss_dssp             CCCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEE-EESCHHHHHHHCTT
T ss_pred             CCccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEE-EeCCHHHHHHHHHh
Confidence            4578999999998 6999999999999998 6666 68998887776653

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=96.31  E-value=0.0051  Score=52.76  Aligned_cols=70  Identities=17%  Similarity=0.256  Sum_probs=48.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      -.|+++||+|+ |++|...++.+...|++|+++ .+++++.+. +++   .+.+..+     ++.+.+++          
T Consensus       175 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~-~~~~~~~~~-~~~---lGa~~v~-----~~~~~~~~----------  233 (348)
T 3two_A          175 TKGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVF-ARNEHKKQD-ALS---MGVKHFY-----TDPKQCKE----------  233 (348)
T ss_dssp             CTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEE-CSSSTTHHH-HHH---TTCSEEE-----SSGGGCCS----------
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEE-eCCHHHHHH-HHh---cCCCeec-----CCHHHHhc----------
Confidence            36899999997 899999999988899998874 666655542 332   3444332     33332211          


Q ss_pred             CccEEEEccCC
Q 024338          104 TVDILINNAGI  114 (269)
Q Consensus       104 ~id~li~~ag~  114 (269)
                      ++|++|.++|.
T Consensus       234 ~~D~vid~~g~  244 (348)
T 3two_A          234 ELDFIISTIPT  244 (348)
T ss_dssp             CEEEEEECCCS
T ss_pred             CCCEEEECCCc
Confidence            79999999984

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=96.27  E-value=0.08  Score=45.32  Aligned_cols=120  Identities=18%  Similarity=0.227  Sum_probs=67.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC-------cEEEEecCCH--HHHHHHHHHHHHcC--CcEEEEEccCCCHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGC-------KVLVNYARSS--KEAEEVCKEIEASG--GQALTFGGDVSKEAD   90 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~-------~v~i~~~r~~--~~~~~~~~~l~~~~--~~~~~~~~Dls~~~~   90 (269)
                      ..++.-.|.|+||+|+||+.++..|+....       ++.+ .+.++  +.++-..-++....  ........+  |.  
T Consensus        20 ~s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L-~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~--~~--   94 (345)
T 4h7p_A           20 GSMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRL-LDIEPALKALAGVEAELEDCAFPLLDKVVVTA--DP--   94 (345)
T ss_dssp             --CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEE-ECCGGGHHHHHHHHHHHHHTTCTTEEEEEEES--CH--
T ss_pred             CCCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEE-ECCCCccccchhhhhhhhhcCccCCCcEEEcC--Ch--
Confidence            344566899999999999999999987642       3444 45544  23344444554432  122222221  21  


Q ss_pred             HHHHHHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--CCCCeEEEEcCC
Q 024338           91 VESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMK--KKKGRIINIASV  164 (269)
Q Consensus        91 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~--~~~~~iv~isS~  164 (269)
                       .+       .+.+.|++|-.||.....   .++.   .+.++.|..=    .+.+.+.+.+  .+..+++.+|..
T Consensus        95 -~~-------a~~~advVvi~aG~prkp---GmtR---~DLl~~Na~I----~~~~~~~i~~~a~~~~~vlvvsNP  152 (345)
T 4h7p_A           95 -RV-------AFDGVAIAIMCGAFPRKA---GMER---KDLLEMNARI----FKEQGEAIAAVAASDCRVVVVGNP  152 (345)
T ss_dssp             -HH-------HTTTCSEEEECCCCCCCT---TCCH---HHHHHHHHHH----HHHHHHHHHHHSCTTCEEEECSSS
T ss_pred             -HH-------HhCCCCEEEECCCCCCCC---CCCH---HHHHHHhHHH----HHHHHHHHHhhccCceEEEEeCCC
Confidence             12       234889999999975432   2343   4456677664    4444554433  244566666653

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=96.25  E-value=0.0085  Score=52.00  Aligned_cols=79  Identities=23%  Similarity=0.279  Sum_probs=51.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-cEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCC-HHHHHHHHHHHHHhc
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGC-KVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK-EADVESMIKTAVDAW  102 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~-~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~-~~~~~~~~~~~~~~~  102 (269)
                      .|++|||+|+ |++|...++.+...|+ +|++ +.+++++++ ++++   .+... +  .|..+ .+++.+.+.++..  
T Consensus       193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~-~~~~~~~~~-~a~~---lGa~~-v--i~~~~~~~~~~~~i~~~~~--  261 (378)
T 3uko_A          193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIG-IDIDSKKYE-TAKK---FGVNE-F--VNPKDHDKPIQEVIVDLTD--  261 (378)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEE-ECSCTTHHH-HHHT---TTCCE-E--ECGGGCSSCHHHHHHHHTT--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEE-EcCCHHHHH-HHHH---cCCcE-E--EccccCchhHHHHHHHhcC--
Confidence            5899999998 9999999998888999 6766 566776655 3333   34332 2  23331 1233333333322  


Q ss_pred             CCccEEEEccCC
Q 024338          103 GTVDILINNAGI  114 (269)
Q Consensus       103 ~~id~li~~ag~  114 (269)
                      +++|++|.++|.
T Consensus       262 gg~D~vid~~g~  273 (378)
T 3uko_A          262 GGVDYSFECIGN  273 (378)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            379999999983

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=96.25  E-value=0.0043  Score=50.93  Aligned_cols=70  Identities=26%  Similarity=0.407  Sum_probs=48.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-cEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGC-KVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~-~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      .+++ +++|.|+ ||.|++++..|++.|+ ++.+ ..|+.++.+++.+++       ....  .   ++..+.+.     
T Consensus       106 ~~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v-~nR~~~ka~~la~~~-------~~~~--~---~~~~~~~~-----  165 (253)
T 3u62_A          106 EVKE-PVVVVGA-GGAARAVIYALLQMGVKDIWV-VNRTIERAKALDFPV-------KIFS--L---DQLDEVVK-----  165 (253)
T ss_dssp             CCCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEE-EESCHHHHHTCCSSC-------EEEE--G---GGHHHHHH-----
T ss_pred             CCCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEE-EeCCHHHHHHHHHHc-------ccCC--H---HHHHhhhc-----
Confidence            4578 8999997 8999999999999998 6766 689887766554322       1111  1   22333332     


Q ss_pred             cCCccEEEEccCC
Q 024338          102 WGTVDILINNAGI  114 (269)
Q Consensus       102 ~~~id~li~~ag~  114 (269)
                        ..|+||++...
T Consensus       166 --~aDiVInatp~  176 (253)
T 3u62_A          166 --KAKSLFNTTSV  176 (253)
T ss_dssp             --TCSEEEECSST
T ss_pred             --CCCEEEECCCC
Confidence              68999998753

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=96.24  E-value=0.064  Score=45.47  Aligned_cols=117  Identities=15%  Similarity=0.202  Sum_probs=69.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-cEEEEecCCHHHHHHHHHHHHHc----CCcEEEEEccCCCHHHHHHHHHHHH
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGC-KVLVNYARSSKEAEEVCKEIEAS----GGQALTFGGDVSKEADVESMIKTAV   99 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~-~v~i~~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dls~~~~~~~~~~~~~   99 (269)
                      +.+.+.|+|+ |.+|.+++..|+..|. ++++ .+++++..+....++...    +....+...+  |.           
T Consensus         4 ~~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l-~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~--d~-----------   68 (321)
T 3p7m_A            4 ARKKITLVGA-GNIGGTLAHLALIKQLGDVVL-FDIAQGMPNGKALDLLQTCPIEGVDFKVRGTN--DY-----------   68 (321)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEE-ECSSSSHHHHHHHHHHTTHHHHTCCCCEEEES--CG-----------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCceEEE-EeCChHHHHHHHHHHHhhhhhcCCCcEEEEcC--CH-----------
Confidence            3467889995 9999999999999887 6666 577776665555555432    1112221111  11           


Q ss_pred             HhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCc
Q 024338          100 DAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVV  165 (269)
Q Consensus       100 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  165 (269)
                      +.+...|++|.++|.....   ..+.   .+.+..|..-...+.+.+..+   .+.+.++++|-..
T Consensus        69 ~a~~~aDvVIi~ag~p~k~---G~~R---~dl~~~N~~i~~~i~~~i~~~---~p~a~vivvtNPv  125 (321)
T 3p7m_A           69 KDLENSDVVIVTAGVPRKP---GMSR---DDLLGINIKVMQTVGEGIKHN---CPNAFVICITNPL  125 (321)
T ss_dssp             GGGTTCSEEEECCSCCCCT---TCCH---HHHHHHHHHHHHHHHHHHHHH---CTTCEEEECCSSH
T ss_pred             HHHCCCCEEEEcCCcCCCC---CCCH---HHHHHHhHHHHHHHHHHHHHH---CCCcEEEEecCch
Confidence            1223789999999864321   1233   334556665544444444332   4567888886544

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=96.22  E-value=0.026  Score=46.29  Aligned_cols=90  Identities=19%  Similarity=0.341  Sum_probs=55.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHH--------HcCCcEEEEEccCCCHHHHHHHH
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIE--------ASGGQALTFGGDVSKEADVESMI   95 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~--------~~~~~~~~~~~Dls~~~~~~~~~   95 (269)
                      +.+.++.|.|+ |.+|..+++.|++.|++++.+..|+++..+++.+.+.        +.-.+..++..- ...+.+.+++
T Consensus         8 ~~~m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~a-v~~~~~~~v~   85 (266)
T 3d1l_A            8 IEDTPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVS-LKDSAFAELL   85 (266)
T ss_dssp             GGGCCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEEC-CCHHHHHHHH
T ss_pred             CCCCeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEe-cCHHHHHHHH
Confidence            33456889997 8999999999999999843336888888777665421        000011111111 2344567788


Q ss_pred             HHHHHhcCCccEEEEccCCC
Q 024338           96 KTAVDAWGTVDILINNAGIT  115 (269)
Q Consensus        96 ~~~~~~~~~id~li~~ag~~  115 (269)
                      +++....++=.++|++.+..
T Consensus        86 ~~l~~~~~~~~ivv~~s~~~  105 (266)
T 3d1l_A           86 QGIVEGKREEALMVHTAGSI  105 (266)
T ss_dssp             HHHHTTCCTTCEEEECCTTS
T ss_pred             HHHHhhcCCCcEEEECCCCC
Confidence            77765543334677776543

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=96.17  E-value=0.014  Score=51.05  Aligned_cols=78  Identities=24%  Similarity=0.374  Sum_probs=51.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-cEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGC-KVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~-~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      -.|++|||+|+ |++|...++.+...|+ .|++ +.+++++++ +++++   +.+. +  .|-.+.+ +   .+++.+..
T Consensus       212 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~-~~~~~~~~~-~~~~l---Ga~~-v--i~~~~~~-~---~~~i~~~t  278 (404)
T 3ip1_A          212 RPGDNVVILGG-GPIGLAAVAILKHAGASKVIL-SEPSEVRRN-LAKEL---GADH-V--IDPTKEN-F---VEAVLDYT  278 (404)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEE-ECSCHHHHH-HHHHH---TCSE-E--ECTTTSC-H---HHHHHHHT
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEE-ECCCHHHHH-HHHHc---CCCE-E--EcCCCCC-H---HHHHHHHh
Confidence            36899999998 8999999988888999 5665 567776654 34444   4332 2  2443322 2   23333333


Q ss_pred             C--CccEEEEccCC
Q 024338          103 G--TVDILINNAGI  114 (269)
Q Consensus       103 ~--~id~li~~ag~  114 (269)
                      +  ++|++|.++|.
T Consensus       279 ~g~g~D~vid~~g~  292 (404)
T 3ip1_A          279 NGLGAKLFLEATGV  292 (404)
T ss_dssp             TTCCCSEEEECSSC
T ss_pred             CCCCCCEEEECCCC
Confidence            2  69999999983

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=96.17  E-value=0.013  Score=50.70  Aligned_cols=47  Identities=19%  Similarity=0.301  Sum_probs=41.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHH
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEI   71 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l   71 (269)
                      +++||+++|+|. |.+|..+|+.|.+.|++|++ .+++.+.++++.+++
T Consensus       170 ~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv-~D~~~~~l~~~a~~~  216 (364)
T 1leh_A          170 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVV-TDVNKAAVSAAVAEE  216 (364)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEE-ECSCHHHHHHHHHHH
T ss_pred             CCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEE-EcCCHHHHHHHHHHc
Confidence            789999999997 78999999999999999886 688888777777664

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=96.15  E-value=0.016  Score=50.51  Aligned_cols=80  Identities=23%  Similarity=0.269  Sum_probs=50.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCc-EEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCK-VLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~-v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      .|++|||+|+ |++|...++.....|+. |++ +.+++++++.+ ++   .+..  .  .|.++.+.+.+.+.++.. -.
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~-~~~~~~~~~~a-~~---lGa~--~--i~~~~~~~~~~~v~~~t~-g~  253 (398)
T 1kol_A          185 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIV-GDLNPARLAHA-KA---QGFE--I--ADLSLDTPLHEQIAALLG-EP  253 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEE-EESCHHHHHHH-HH---TTCE--E--EETTSSSCHHHHHHHHHS-SS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCeEEE-EcCCHHHHHHH-HH---cCCc--E--EccCCcchHHHHHHHHhC-CC
Confidence            6899999995 99999998888889995 555 57777665433 33   3443  2  344433222222222211 12


Q ss_pred             CccEEEEccCCC
Q 024338          104 TVDILINNAGIT  115 (269)
Q Consensus       104 ~id~li~~ag~~  115 (269)
                      ++|++|.++|..
T Consensus       254 g~Dvvid~~G~~  265 (398)
T 1kol_A          254 EVDCAVDAVGFE  265 (398)
T ss_dssp             CEEEEEECCCTT
T ss_pred             CCCEEEECCCCc
Confidence            699999999853

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=96.15  E-value=0.019  Score=47.63  Aligned_cols=166  Identities=15%  Similarity=0.123  Sum_probs=92.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHH-cCCcEEEEecCCHHHH--H-----------------HHHHHHHHcCCcEEEEEccC
Q 024338           26 APVAVVTGASRGIGRAVATSLGK-AGCKVLVNYARSSKEA--E-----------------EVCKEIEASGGQALTFGGDV   85 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~-~G~~v~i~~~r~~~~~--~-----------------~~~~~l~~~~~~~~~~~~Dl   85 (269)
                      +-.+.|+|++|.+|+.+++.+.+ .|+.++..+.++.+..  .                 ++.+.+.  ..+   +..|+
T Consensus         5 ~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l~--~~D---vVIDf   79 (273)
T 1dih_A            5 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKD--DFD---VFIDF   79 (273)
T ss_dssp             BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTT--SCS---EEEEC
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHhc--CCC---EEEEc
Confidence            34799999999999999999875 4677665456554220  0                 0111110  111   44589


Q ss_pred             CCHHHHHHHHHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHH----------HH----hHHHHHHHHHHHHHHH
Q 024338           86 SKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVID----------LN----LTGVFLCTQAAAKIMM  151 (269)
Q Consensus        86 s~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~----------~n----~~~~~~l~~~~~~~l~  151 (269)
                      +.++.....+..+.+.  ++++|+-..|..         .++.++..+          .|    +.-.+.+++.+.++|.
T Consensus        80 t~p~~~~~~~~~a~~~--G~~vVigTtG~~---------~e~~~~L~~~a~~~~vv~a~N~siGvn~~~~l~~~aa~~~~  148 (273)
T 1dih_A           80 TRPEGTLNHLAFCRQH--GKGMVIGTTGFD---------EAGKQAIRDAAADIAIVFAANFSVGVNVMLKLLEKAAKVMG  148 (273)
T ss_dssp             SCHHHHHHHHHHHHHT--TCEEEECCCCCC---------HHHHHHHHHHTTTSCEEECSCCCHHHHHHHHHHHHHHHHHT
T ss_pred             CChHHHHHHHHHHHhC--CCCEEEECCCCC---------HHHHHHHHHhcCCCCEEEEecCcHHHHHHHHHHHHHHHhcC
Confidence            9999888888888776  678888677642         222222211          11    1113334444444442


Q ss_pred             hCCCCeEEEEcCCccccCCCCChhhHHhHHHHHHHHHHHHHHh---------------ccCCeEEEEEecCCccCC
Q 024338          152 KKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEY---------------ASRNINVNAIAPGFIASD  212 (269)
Q Consensus       152 ~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~~~la~e~---------------~~~gi~v~~v~pG~v~t~  212 (269)
                        ..-.+=.+   ..+-...--.+|+.++...+.+.+.+...+               .+.+|.+.++.-|-+-..
T Consensus       149 --~~~dieii---E~Hh~~K~DaPSGTA~~~ae~i~~~~~~~~~~~~~~~r~~~~~~r~~~~i~i~s~R~g~vvg~  219 (273)
T 1dih_A          149 --DYTDIEII---EAHHRHKVDAPSGTALAMGEAIAHALDKDLKDCAVYSREGHTGERVPGTIGFATVRAGDIVGE  219 (273)
T ss_dssp             --TTSEEEEE---EEECTTCCSSSCHHHHHHHHHHHHHTTCCGGGTEECCCCSCCCSCCTTCEEEEEEECTTCCEE
T ss_pred             --CCCCEEEE---EeecCCCCCCCCHHHHHHHHHHHHhhCCCccccccccccCccCCCCCCcceEEEEeCCCCCcc
Confidence              11111111   112222334678999986666655544321               135799999997655543

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=96.14  E-value=0.0089  Score=51.51  Aligned_cols=75  Identities=21%  Similarity=0.268  Sum_probs=49.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      .|+++||+|+ |++|...++.+...|++|+++ .+++++.+.+ +++   +... ++  |..+..+   ..+++.   ++
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~-~~~~~~~~~~-~~l---Ga~~-v~--~~~~~~~---~~~~~~---~~  243 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVI-SRSSRKREDA-MKM---GADH-YI--ATLEEGD---WGEKYF---DT  243 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEE-ESSSTTHHHH-HHH---TCSE-EE--EGGGTSC---HHHHSC---SC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEE-cCCHHHHHHH-HHc---CCCE-EE--cCcCchH---HHHHhh---cC
Confidence            5899999999 999999999888899997774 5665555432 333   3332 22  3332201   112222   58


Q ss_pred             ccEEEEccCC
Q 024338          105 VDILINNAGI  114 (269)
Q Consensus       105 id~li~~ag~  114 (269)
                      +|++|.++|.
T Consensus       244 ~D~vid~~g~  253 (360)
T 1piw_A          244 FDLIVVCASS  253 (360)
T ss_dssp             EEEEEECCSC
T ss_pred             CCEEEECCCC
Confidence            9999999985

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=96.13  E-value=0.025  Score=47.94  Aligned_cols=87  Identities=17%  Similarity=0.200  Sum_probs=57.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHH-------HHH--cCCcEEEEEccCCCHHHHHH
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKE-------IEA--SGGQALTFGGDVSKEADVES   93 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~-------l~~--~~~~~~~~~~Dls~~~~~~~   93 (269)
                      +...+++.|.|+ |.+|..+++.|++.|++|.+ ..|+++..+++.+.       +.+  ...++  +..-+.+...++.
T Consensus        28 ~~~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~-~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDv--Vi~~vp~~~~~~~  103 (320)
T 4dll_A           28 DPYARKITFLGT-GSMGLPMARRLCEAGYALQV-WNRTPARAASLAALGATIHEQARAAARDADI--VVSMLENGAVVQD  103 (320)
T ss_dssp             -CCCSEEEEECC-TTTHHHHHHHHHHTTCEEEE-ECSCHHHHHHHHTTTCEEESSHHHHHTTCSE--EEECCSSHHHHHH
T ss_pred             ccCCCEEEEECc-cHHHHHHHHHHHhCCCeEEE-EcCCHHHHHHHHHCCCEeeCCHHHHHhcCCE--EEEECCCHHHHHH
Confidence            344568888866 79999999999999999888 58888877665432       111  12233  3334456667777


Q ss_pred             HHH--HHHHhcCCccEEEEccC
Q 024338           94 MIK--TAVDAWGTVDILINNAG  113 (269)
Q Consensus        94 ~~~--~~~~~~~~id~li~~ag  113 (269)
                      ++.  ++.....+=.++|++..
T Consensus       104 v~~~~~~~~~l~~~~~vi~~st  125 (320)
T 4dll_A          104 VLFAQGVAAAMKPGSLFLDMAS  125 (320)
T ss_dssp             HHTTTCHHHHCCTTCEEEECSC
T ss_pred             HHcchhHHhhCCCCCEEEecCC
Confidence            776  56655545556676654

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=96.13  E-value=0.0088  Score=51.47  Aligned_cols=100  Identities=14%  Similarity=0.222  Sum_probs=62.1

Q ss_pred             CCCCEEEEeCCCCchHHHH-HHHH-HHcCCc-EEEEecCCHH---HHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHH
Q 024338           24 VEAPVAVVTGASRGIGRAV-ATSL-GKAGCK-VLVNYARSSK---EAEEVCKEIEASGGQALTFGGDVSKEADVESMIKT   97 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~-a~~l-~~~G~~-v~i~~~r~~~---~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~   97 (269)
                      ++++++||+|+ |++|... ++.+ ...|++ |+++ .++++   +.+. ++++   +.+  .+  |..+. ++.+ +.+
T Consensus       171 ~~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~-~~~~~~~~~~~~-~~~l---Ga~--~v--~~~~~-~~~~-i~~  238 (357)
T 2b5w_A          171 WDPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCL-GRRDRPDPTIDI-IEEL---DAT--YV--DSRQT-PVED-VPD  238 (357)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEE-ECCCSSCHHHHH-HHHT---TCE--EE--ETTTS-CGGG-HHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEE-eCCcccHHHHHH-HHHc---CCc--cc--CCCcc-CHHH-HHH
Confidence            33499999999 9999998 7776 678998 7774 55554   4432 3333   432  22  54432 2333 444


Q ss_pred             HHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCc
Q 024338           98 AVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVV  165 (269)
Q Consensus        98 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  165 (269)
                      +   .+++|++|.++|..          .               ..+.++..+  +++|+++.++...
T Consensus       239 ~---~gg~Dvvid~~g~~----------~---------------~~~~~~~~l--~~~G~iv~~g~~~  276 (357)
T 2b5w_A          239 V---YEQMDFIYEATGFP----------K---------------HAIQSVQAL--APNGVGALLGVPS  276 (357)
T ss_dssp             H---SCCEEEEEECSCCH----------H---------------HHHHHHHHE--EEEEEEEECCCCC
T ss_pred             h---CCCCCEEEECCCCh----------H---------------HHHHHHHHH--hcCCEEEEEeCCC
Confidence            3   24799999999831          1               123344444  4578999987654

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=96.13  E-value=0.007  Score=50.69  Aligned_cols=72  Identities=25%  Similarity=0.326  Sum_probs=49.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      .+++||+++|.|+ |++|+.+++.+...|++|++ ..|+.++.+.+.    +.+.+  .+  +.   ++++++       
T Consensus       151 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~-~dr~~~~~~~~~----~~g~~--~~--~~---~~l~~~-------  210 (293)
T 3d4o_A          151 FTIHGANVAVLGL-GRVGMSVARKFAALGAKVKV-GARESDLLARIA----EMGME--PF--HI---SKAAQE-------  210 (293)
T ss_dssp             SCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEE-EESSHHHHHHHH----HTTSE--EE--EG---GGHHHH-------
T ss_pred             CCCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEE-EECCHHHHHHHH----HCCCe--ec--Ch---hhHHHH-------
Confidence            4789999999995 79999999999999998887 577776544332    22322  22  11   222222       


Q ss_pred             cCCccEEEEccC
Q 024338          102 WGTVDILINNAG  113 (269)
Q Consensus       102 ~~~id~li~~ag  113 (269)
                      ....|+|+++..
T Consensus       211 l~~aDvVi~~~p  222 (293)
T 3d4o_A          211 LRDVDVCINTIP  222 (293)
T ss_dssp             TTTCSEEEECCS
T ss_pred             hcCCCEEEECCC
Confidence            237899999875

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=96.13  E-value=0.025  Score=48.88  Aligned_cols=76  Identities=16%  Similarity=0.257  Sum_probs=48.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCc-EEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc-
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCK-VLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW-  102 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~-v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~-  102 (269)
                      .|+++||+|+ |++|...++.+...|+. |++ +.+++++.+. ++++   +.+. ++  |..+.+ +   .+++.+.. 
T Consensus       190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~-~~~~~~~~~~-a~~l---Ga~~-vi--~~~~~~-~---~~~~~~~~~  256 (371)
T 1f8f_A          190 PASSFVTWGA-GAVGLSALLAAKVCGASIIIA-VDIVESRLEL-AKQL---GATH-VI--NSKTQD-P---VAAIKEITD  256 (371)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEE-EESCHHHHHH-HHHH---TCSE-EE--ETTTSC-H---HHHHHHHTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEE-ECCCHHHHHH-HHHc---CCCE-Ee--cCCccC-H---HHHHHHhcC
Confidence            5799999995 89999999888888995 555 5677766543 3333   3332 22  333322 2   22333322 


Q ss_pred             CCccEEEEccC
Q 024338          103 GTVDILINNAG  113 (269)
Q Consensus       103 ~~id~li~~ag  113 (269)
                      +++|++|.++|
T Consensus       257 gg~D~vid~~g  267 (371)
T 1f8f_A          257 GGVNFALESTG  267 (371)
T ss_dssp             SCEEEEEECSC
T ss_pred             CCCcEEEECCC
Confidence            37999999998

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=96.03  E-value=0.0097  Score=51.28  Aligned_cols=83  Identities=17%  Similarity=0.268  Sum_probs=58.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCH-------------------HHHHHHHHHHHHcC--CcEEE
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSS-------------------KEAEEVCKEIEASG--GQALT   80 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~-------------------~~~~~~~~~l~~~~--~~~~~   80 (269)
                      ..+++++|+|.|+ ||+|.++++.|+..|..-+.+++++.                   .+.+.+.+.+++..  .++..
T Consensus       114 ~~L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~  192 (353)
T 3h5n_A          114 DKLKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSE  192 (353)
T ss_dssp             HHHHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEE
T ss_pred             HHHhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEE
Confidence            4567899999998 69999999999999976555455542                   24556666666654  45667


Q ss_pred             EEccCCCHHHHHHHHHHHHHhcCCccEEEEccC
Q 024338           81 FGGDVSKEADVESMIKTAVDAWGTVDILINNAG  113 (269)
Q Consensus        81 ~~~Dls~~~~~~~~~~~~~~~~~~id~li~~ag  113 (269)
                      +..+++...++.       + +.+.|+||.+..
T Consensus       193 ~~~~i~~~~~~~-------~-~~~~DlVvd~~D  217 (353)
T 3h5n_A          193 IALNINDYTDLH-------K-VPEADIWVVSAD  217 (353)
T ss_dssp             EECCCCSGGGGG-------G-SCCCSEEEECCC
T ss_pred             eecccCchhhhh-------H-hccCCEEEEecC
Confidence            777777654222       2 458899998763

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=96.01  E-value=0.021  Score=52.34  Aligned_cols=91  Identities=13%  Similarity=0.078  Sum_probs=57.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCH-------------------HHHHHHHHHHHHcCC--cEEE
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSS-------------------KEAEEVCKEIEASGG--QALT   80 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~-------------------~~~~~~~~~l~~~~~--~~~~   80 (269)
                      ..+++++|+|.|++ |+|.++++.|+..|..-+.+++.+.                   .+.+.+.+.+++...  ++..
T Consensus       322 ekL~~arVLIVGaG-GLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP~V~v~~  400 (615)
T 4gsl_A          322 DIIKNTKVLLLGAG-TLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATG  400 (615)
T ss_dssp             HHHHTCEEEEECCS-HHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEE
T ss_pred             HHHhCCeEEEECCC-HHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCCCcEEEE
Confidence            35788999999985 9999999999999987665556543                   356667777776654  4444


Q ss_pred             EEccC-------CCHHHHHHHHHHHHHhcCCccEEEEccC
Q 024338           81 FGGDV-------SKEADVESMIKTAVDAWGTVDILINNAG  113 (269)
Q Consensus        81 ~~~Dl-------s~~~~~~~~~~~~~~~~~~id~li~~ag  113 (269)
                      +..++       ++++...--.+.+.+.+...|+||.+..
T Consensus       401 ~~~~Ipm~gh~v~~e~~~~l~~~~l~~ll~~~DlVvd~tD  440 (615)
T 4gsl_A          401 VKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVD  440 (615)
T ss_dssp             ECCCCCCTTCCCSCHHHHHHHHHHHHHHHHHCSEEEECCS
T ss_pred             eeccccccCccccchhhhcCCHHHHHHHhhcCCEEEecCC
Confidence            55444       2321111111122222336899998864

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=96.00  E-value=0.12  Score=43.62  Aligned_cols=116  Identities=13%  Similarity=0.148  Sum_probs=67.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC--cEEEEecCCHHHHHHHHHHHHHc----CCcEEEEEccCCCHHHHHHHHHHH
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGC--KVLVNYARSSKEAEEVCKEIEAS----GGQALTFGGDVSKEADVESMIKTA   98 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~--~v~i~~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dls~~~~~~~~~~~~   98 (269)
                      ....+.|+|+ |.+|..++..++.+|.  ++++ .+.++++++.....+...    +.++.+. .|  +           
T Consensus         5 ~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L-~Di~~~~~~g~~~dl~~~~~~~~~~~~v~-~~--~-----------   68 (317)
T 3d0o_A            5 KGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVI-IDLDTEKVRGDVMDLKHATPYSPTTVRVK-AG--E-----------   68 (317)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEE-ECSCHHHHHHHHHHHHHHGGGSSSCCEEE-EC--C-----------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEE-EeCChhHhhhhhhhHHhhhhhcCCCeEEE-eC--C-----------
Confidence            3467999999 9999999999998884  5555 688877665444444321    1222222 22  1           


Q ss_pred             HHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCc
Q 024338           99 VDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVV  165 (269)
Q Consensus        99 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  165 (269)
                      .+.+...|++|..+|.....   ..+.   ...+..|..-...+.+.+.++   .+++.++++|--.
T Consensus        69 ~~a~~~aDvVvi~ag~~~~~---g~~r---~dl~~~n~~i~~~i~~~i~~~---~p~a~viv~tNPv  126 (317)
T 3d0o_A           69 YSDCHDADLVVICAGAAQKP---GETR---LDLVSKNLKIFKSIVGEVMAS---KFDGIFLVATNPV  126 (317)
T ss_dssp             GGGGTTCSEEEECCCCCCCT---TCCH---HHHHHHHHHHHHHHHHHHHHT---TCCSEEEECSSSH
T ss_pred             HHHhCCCCEEEECCCCCCCC---CCcH---HHHHHHHHHHHHHHHHHHHHh---CCCcEEEEecCcH
Confidence            11233789999999874321   1222   234555555433333333332   4567788766543

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=95.95  E-value=0.019  Score=50.52  Aligned_cols=73  Identities=22%  Similarity=0.290  Sum_probs=51.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCcc
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVD  106 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id  106 (269)
                      ..++|.|. |.+|..+++.|.++|..|++ +.++++..+.+.+    .  .+.++.+|.++.+.++++      ...+.|
T Consensus         5 ~~viIiG~-Gr~G~~va~~L~~~g~~vvv-Id~d~~~v~~~~~----~--g~~vi~GDat~~~~L~~a------gi~~A~   70 (413)
T 3l9w_A            5 MRVIIAGF-GRFGQITGRLLLSSGVKMVV-LDHDPDHIETLRK----F--GMKVFYGDATRMDLLESA------GAAKAE   70 (413)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEE-EECCHHHHHHHHH----T--TCCCEESCTTCHHHHHHT------TTTTCS
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCEEE-EECCHHHHHHHHh----C--CCeEEEcCCCCHHHHHhc------CCCccC
Confidence            45888887 78999999999999999988 5888877665432    2  244677888887755443      112567


Q ss_pred             EEEEccC
Q 024338          107 ILINNAG  113 (269)
Q Consensus       107 ~li~~ag  113 (269)
                      .||.+.+
T Consensus        71 ~viv~~~   77 (413)
T 3l9w_A           71 VLINAID   77 (413)
T ss_dssp             EEEECCS
T ss_pred             EEEECCC
Confidence            7766553

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=95.95  E-value=0.1  Score=44.41  Aligned_cols=116  Identities=13%  Similarity=0.061  Sum_probs=70.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC--cEEEEecCCHHHHHHHHHHHHHcC----CcEEEEEccCCCHHHHHHHHHHH
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGC--KVLVNYARSSKEAEEVCKEIEASG----GQALTFGGDVSKEADVESMIKTA   98 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~--~v~i~~~r~~~~~~~~~~~l~~~~----~~~~~~~~Dls~~~~~~~~~~~~   98 (269)
                      +.+.+.|+|+ |.+|..++..++..|.  ++++ .+.+++.++....++....    ........|..+           
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L-~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~-----------   86 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADEVAL-VDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV-----------   86 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEE-ECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS-----------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEE-EECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH-----------
Confidence            4578999999 9999999999999996  5665 6888877766555554321    111112233322           


Q ss_pred             HHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCc
Q 024338           99 VDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVV  165 (269)
Q Consensus        99 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  165 (269)
                         +...|++|.+||......   .+.   .+.+..|..-...+.+.+.++   .+.+.++++|...
T Consensus        87 ---~~daDiVIitaG~p~kpG---~tR---~dll~~N~~I~k~i~~~I~k~---~P~a~ilvvtNPv  141 (330)
T 3ldh_A           87 ---SAGSKLVVITAGARQQEG---ESR---LNLVQRNVNIFKFIIPNIVKH---SPDCLKELHPELG  141 (330)
T ss_dssp             ---CSSCSEEEECCSCCCCSS---CCT---TGGGHHHHHHHHHHHHHHHHH---CTTCEEEECSSSH
T ss_pred             ---hCCCCEEEEeCCCCCCCC---CCH---HHHHHhhHHHHHHHHHHHHhh---CCCceEEeCCCcc
Confidence               237899999999753321   111   124444444333333333332   4677888887654

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=95.88  E-value=0.014  Score=51.90  Aligned_cols=83  Identities=22%  Similarity=0.278  Sum_probs=53.7

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      .+++++|.++|.|. |+.|.++|+.|.++|+.|.+...+... .....+.+++.+.++  ....-.+     ..++    
T Consensus         4 ~~~~~~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~~~-~~~~~~~L~~~gi~~--~~g~~~~-----~~~~----   70 (451)
T 3lk7_A            4 ITTFENKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKPFD-ENPTAQSLLEEGIKV--VCGSHPL-----ELLD----   70 (451)
T ss_dssp             CCTTTTCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSCGG-GCHHHHHHHHTTCEE--EESCCCG-----GGGG----
T ss_pred             hhhcCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCccc-CChHHHHHHhCCCEE--EECCChH-----Hhhc----
Confidence            35688999999999 789999999999999999995443321 112334555545433  2222111     0111    


Q ss_pred             hcCCccEEEEccCCCCCC
Q 024338          101 AWGTVDILINNAGITRDT  118 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~  118 (269)
                        +..|.||.+.|+....
T Consensus        71 --~~~d~vv~spgi~~~~   86 (451)
T 3lk7_A           71 --EDFCYMIKNPGIPYNN   86 (451)
T ss_dssp             --SCEEEEEECTTSCTTS
T ss_pred             --CCCCEEEECCcCCCCC
Confidence              1389999999986543

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=95.83  E-value=0.17  Score=42.97  Aligned_cols=75  Identities=16%  Similarity=0.140  Sum_probs=49.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-cEEEEecCCHHHHHHHHHHHHHc------CCcEEEEEccCCCHHHHHHHHHH
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGC-KVLVNYARSSKEAEEVCKEIEAS------GGQALTFGGDVSKEADVESMIKT   97 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~-~v~i~~~r~~~~~~~~~~~l~~~------~~~~~~~~~Dls~~~~~~~~~~~   97 (269)
                      +...+.|+|+ |.+|..++..|+..|. +|++ .+++++.++.....+...      ..++...    +|.   ++.+  
T Consensus         8 ~~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L-~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t----~d~---~ea~--   76 (331)
T 1pzg_A            8 RRKKVAMIGS-GMIGGTMGYLCALRELADVVL-YDVVKGMPEGKALDLSHVTSVVDTNVSVRAE----YSY---EAAL--   76 (331)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEE-ECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE----CSH---HHHH--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEE-EECChhHHHHHHHHHHhhhhccCCCCEEEEe----CCH---HHHh--
Confidence            3457999998 9999999999999997 8555 688877666533333221      1122211    232   2223  


Q ss_pred             HHHhcCCccEEEEccCCC
Q 024338           98 AVDAWGTVDILINNAGIT  115 (269)
Q Consensus        98 ~~~~~~~id~li~~ag~~  115 (269)
                           ...|++|.++|..
T Consensus        77 -----~~aDiVi~a~g~p   89 (331)
T 1pzg_A           77 -----TGADCVIVTAGLT   89 (331)
T ss_dssp             -----TTCSEEEECCSCS
T ss_pred             -----CCCCEEEEccCCC
Confidence                 2789999999864

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=95.83  E-value=0.065  Score=45.36  Aligned_cols=114  Identities=18%  Similarity=0.190  Sum_probs=65.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC--cEEEEecCCHHHHHHHHHHHHHcC---CcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGC--KVLVNYARSSKEAEEVCKEIEASG---GQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~--~v~i~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      ..+.|+|+ |.+|..++..|+..|.  ++++ ++.++++++....++....   .++.+. .  .+           .+.
T Consensus         8 ~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L-~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~--~~-----------~~a   71 (318)
T 1y6j_A            8 SKVAIIGA-GFVGASAAFTMALRQTANELVL-IDVFKEKAIGEAMDINHGLPFMGQMSLY-A--GD-----------YSD   71 (318)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEE-ECCC---CCHHHHHHTTSCCCTTCEEEC-----C-----------GGG
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEE-EeCChHHHHHHHHHHHHhHHhcCCeEEE-E--CC-----------HHH
Confidence            46889998 9999999999999986  6666 5777766554444453321   122211 1  11           112


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCc
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVV  165 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  165 (269)
                      +...|++|.++|.....   ..+   -.+.+..|+.-...+.+.+.++   .+++.++++|--.
T Consensus        72 ~~~aDvVii~~g~p~k~---g~~---r~dl~~~n~~i~~~i~~~i~~~---~p~a~viv~tNPv  126 (318)
T 1y6j_A           72 VKDCDVIVVTAGANRKP---GET---RLDLAKKNVMIAKEVTQNIMKY---YNHGVILVVSNPV  126 (318)
T ss_dssp             GTTCSEEEECCCC---------C---HHHHHHHHHHHHHHHHHHHHHH---CCSCEEEECSSSH
T ss_pred             hCCCCEEEEcCCCCCCC---CcC---HHHHHHhhHHHHHHHHHHHHHh---CCCcEEEEecCcH
Confidence            34789999999864321   112   2345666666655555555443   4677777765543

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=95.82  E-value=0.042  Score=47.94  Aligned_cols=80  Identities=20%  Similarity=0.268  Sum_probs=50.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-cEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGC-KVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~-~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      .|++|||+|+ |++|...++.+...|+ +|++ +.+++++++. +   ++.+..  .+  |..+.+.+.+.+.++.. -.
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~-~~~~~~~~~~-a---~~lGa~--~i--~~~~~~~~~~~~~~~~~-g~  253 (398)
T 2dph_A          185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIV-GDQNPERLKL-L---SDAGFE--TI--DLRNSAPLRDQIDQILG-KP  253 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEE-EESCHHHHHH-H---HTTTCE--EE--ETTSSSCHHHHHHHHHS-SS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEE-EcCCHHHHHH-H---HHcCCc--EE--cCCCcchHHHHHHHHhC-CC
Confidence            6899999997 9999999988888899 6766 5677766543 2   233442  33  44432211222222211 11


Q ss_pred             CccEEEEccCCC
Q 024338          104 TVDILINNAGIT  115 (269)
Q Consensus       104 ~id~li~~ag~~  115 (269)
                      ++|++|.++|..
T Consensus       254 g~Dvvid~~g~~  265 (398)
T 2dph_A          254 EVDCGVDAVGFE  265 (398)
T ss_dssp             CEEEEEECSCTT
T ss_pred             CCCEEEECCCCc
Confidence            699999999853

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=95.80  E-value=0.028  Score=45.77  Aligned_cols=77  Identities=12%  Similarity=0.167  Sum_probs=57.1

Q ss_pred             EEEEeCCCCchHHHHHHHHHHc-CCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCcc
Q 024338           28 VAVVTGASRGIGRAVATSLGKA-GCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVD  106 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~-G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id  106 (269)
                      .+.|+|++|.+|+.+++.+.+. |+.++....++. .++++..    ...+   +..|+|+++...+.+..+.+.  +++
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~-dl~~~~~----~~~D---vvIDfT~p~a~~~~~~~a~~~--g~~   71 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGD-PLSLLTD----GNTE---VVIDFTHPDVVMGNLEFLIDN--GIH   71 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTC-CTHHHHH----TTCC---EEEECSCTTTHHHHHHHHHHT--TCE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCC-CHHHHhc----cCCc---EEEEccChHHHHHHHHHHHHc--CCC
Confidence            4899999999999999999876 888887555542 2222221    1222   667999999998888887776  789


Q ss_pred             EEEEccCC
Q 024338          107 ILINNAGI  114 (269)
Q Consensus       107 ~li~~ag~  114 (269)
                      +|+...|.
T Consensus        72 ~VigTTG~   79 (245)
T 1p9l_A           72 AVVGTTGF   79 (245)
T ss_dssp             EEECCCCC
T ss_pred             EEEcCCCC
Confidence            99988874

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=95.67  E-value=0.019  Score=50.67  Aligned_cols=80  Identities=13%  Similarity=0.172  Sum_probs=53.0

Q ss_pred             hhhhcccccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHH-HHHHHHHHHHHcCCcEEEEEccCCCHHHH
Q 024338           13 IEQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSK-EAEEVCKEIEASGGQALTFGGDVSKEADV   91 (269)
Q Consensus        13 ~~~~~~~~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~-~~~~~~~~l~~~~~~~~~~~~Dls~~~~~   91 (269)
                      +...+..+++-+.+|+++|.|++ .+|+.+++.+.+.|.+++++ ..++. ....+.       .  ..+..|..|.+.+
T Consensus        22 ~~~~~~~~~~~~~~~~IlIlG~G-~lg~~~~~aa~~lG~~v~v~-d~~~~~p~~~~a-------d--~~~~~~~~d~~~l   90 (419)
T 4e4t_A           22 MTATPDSVSPILPGAWLGMVGGG-QLGRMFCFAAQSMGYRVAVL-DPDPASPAGAVA-------D--RHLRAAYDDEAAL   90 (419)
T ss_dssp             -------CCCCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEE-CSCTTCHHHHHS-------S--EEECCCTTCHHHH
T ss_pred             hccCccccccCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEE-CCCCcCchhhhC-------C--EEEECCcCCHHHH
Confidence            33333444466789999999864 79999999999999999885 44432 222211       1  2456788998888


Q ss_pred             HHHHHHHHHhcCCccEEEE
Q 024338           92 ESMIKTAVDAWGTVDILIN  110 (269)
Q Consensus        92 ~~~~~~~~~~~~~id~li~  110 (269)
                      .++++       ++|+++.
T Consensus        91 ~~~a~-------~~D~V~~  102 (419)
T 4e4t_A           91 AELAG-------LCEAVST  102 (419)
T ss_dssp             HHHHH-------HCSEEEE
T ss_pred             HHHHh-------cCCEEEE
Confidence            87773       5888874

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=95.67  E-value=0.049  Score=46.46  Aligned_cols=102  Identities=18%  Similarity=0.249  Sum_probs=62.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHc-CCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKA-GCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~-G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      -.|++++|+|+ |++|...++.+... |++|++ +.+++++.+. +++   .+.+.. +  |-.+ + .   .+++.+..
T Consensus       170 ~~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~-~~~~~~~~~~-~~~---lGa~~~-i--~~~~-~-~---~~~v~~~t  235 (345)
T 3jv7_A          170 GPGSTAVVIGV-GGLGHVGIQILRAVSAARVIA-VDLDDDRLAL-ARE---VGADAA-V--KSGA-G-A---ADAIRELT  235 (345)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEE-EESCHHHHHH-HHH---TTCSEE-E--ECST-T-H---HHHHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEE-EcCCHHHHHH-HHH---cCCCEE-E--cCCC-c-H---HHHHHHHh
Confidence            36899999998 99999888877777 677776 4677766543 333   344332 2  2222 2 2   22333322


Q ss_pred             C--CccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcc
Q 024338          103 G--TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVG  166 (269)
Q Consensus       103 ~--~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  166 (269)
                      +  ++|++|.++|..          +               ..+..+..+  ++.|+++.++...+
T Consensus       236 ~g~g~d~v~d~~G~~----------~---------------~~~~~~~~l--~~~G~iv~~G~~~~  274 (345)
T 3jv7_A          236 GGQGATAVFDFVGAQ----------S---------------TIDTAQQVV--AVDGHISVVGIHAG  274 (345)
T ss_dssp             GGGCEEEEEESSCCH----------H---------------HHHHHHHHE--EEEEEEEECSCCTT
T ss_pred             CCCCCeEEEECCCCH----------H---------------HHHHHHHHH--hcCCEEEEECCCCC
Confidence            2  799999999831          0               233444544  46789998876543

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=95.63  E-value=0.045  Score=43.82  Aligned_cols=46  Identities=17%  Similarity=0.180  Sum_probs=36.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVC   68 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~   68 (269)
                      .+++||.+||.||+ .+|...++.|++.|++|+++.....+.++++.
T Consensus        27 l~L~gk~VLVVGgG-~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~   72 (223)
T 3dfz_A           27 LDLKGRSVLVVGGG-TIATRRIKGFLQEGAAITVVAPTVSAEINEWE   72 (223)
T ss_dssp             ECCTTCCEEEECCS-HHHHHHHHHHGGGCCCEEEECSSCCHHHHHHH
T ss_pred             EEcCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEECCCCCHHHHHHH
Confidence            57899999999985 89999999999999999986443334444443

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=95.62  E-value=0.32  Score=40.98  Aligned_cols=116  Identities=22%  Similarity=0.223  Sum_probs=66.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHHc-C--CcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           28 VAVVTGASRGIGRAVATSLGKA-G--CKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~-G--~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      .|.|+||+|.+|.+++..|+.+ +  .++++ .+.++ ..+-...++........+....=++.   .+.+       .+
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~el~L-~Di~~-~~~G~a~Dl~~~~~~~~v~~~~~~~~---~~~~-------~~   69 (312)
T 3hhp_A            2 KVAVLGAAGGIGQALALLLKTQLPSGSELSL-YDIAP-VTPGVAVDLSHIPTAVKIKGFSGEDA---TPAL-------EG   69 (312)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTEEEEE-ECSST-THHHHHHHHHTSCSSEEEEEECSSCC---HHHH-------TT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCCceEEE-EecCC-CchhHHHHhhCCCCCceEEEecCCCc---HHHh-------CC
Confidence            4789999999999999999886 5  34555 56665 23333444443322222221100111   1122       37


Q ss_pred             ccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Q 024338          105 VDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASV  164 (269)
Q Consensus       105 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~  164 (269)
                      .|++|.+||.....   .++   -.+.++.|..-...+.+.+.++   .+++.++++|--
T Consensus        70 aDivii~ag~~rkp---G~~---R~dll~~N~~I~~~i~~~i~~~---~p~a~vlvvtNP  120 (312)
T 3hhp_A           70 ADVVLISAGVARKP---GMD---RSDLFNVNAGIVKNLVQQVAKT---CPKACIGIITNP  120 (312)
T ss_dssp             CSEEEECCSCSCCT---TCC---HHHHHHHHHHHHHHHHHHHHHH---CTTSEEEECSSC
T ss_pred             CCEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHHH---CCCcEEEEecCc
Confidence            89999999964321   122   3556677776655555554442   466788888764

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=95.60  E-value=0.25  Score=41.89  Aligned_cols=115  Identities=11%  Similarity=0.143  Sum_probs=68.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC--cEEEEecCCHHHHHHHHHHHHHcC---CcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGC--KVLVNYARSSKEAEEVCKEIEASG---GQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~--~v~i~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      ..+.|+|+ |.+|..++..++..+.  ++++ .+.++++++....++....   .++.+. .|  +.           +.
T Consensus        10 ~KI~IiGa-G~vG~~la~~l~~~~~~~el~L-~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~~--~~-----------~a   73 (326)
T 2zqz_A           10 QKVILVGD-GAVGSSYAYAMVLQGIAQEIGI-VDIFKDKTKGDAIDLSNALPFTSPKKIY-SA--EY-----------SD   73 (326)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEE-ECSCHHHHHHHHHHHHTTGGGSCCCEEE-EC--CG-----------GG
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEE-EeCCchHhHHHHHHHHHHHHhcCCeEEE-EC--CH-----------HH
Confidence            57999999 9999999999998874  4555 6888887776666664421   222222 12  11           11


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcc
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVG  166 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  166 (269)
                      +...|++|..+|.....   ..+.   ...+..|..-...+.+.+..+   .+.+.++++|--..
T Consensus        74 ~~~aDvVii~ag~~~k~---g~~R---~dl~~~n~~i~~~i~~~i~~~---~p~a~iiv~tNPv~  129 (326)
T 2zqz_A           74 AKDADLVVITAGAPQKP---GETR---LDLVNKNLKILKSIVDPIVDS---GFNGIFLVAANPVD  129 (326)
T ss_dssp             GGGCSEEEECCCCC--------CH---HHHHHHHHHHHHHHHHHHHHH---TCCSEEEECSSSHH
T ss_pred             hCCCCEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHHH---CCCeEEEEeCCcHH
Confidence            23789999999864321   1222   234555555443444433332   46788888866443

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=95.60  E-value=0.012  Score=48.79  Aligned_cols=37  Identities=41%  Similarity=0.429  Sum_probs=33.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecC
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYAR   59 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r   59 (269)
                      .+++||.++|.|.++-+|+.++..|+.+|+.|.+. .+
T Consensus       156 i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~-h~  192 (285)
T 3p2o_A          156 IDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVC-HI  192 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEE-CT
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEE-eC
Confidence            57899999999999999999999999999998884 44

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=95.59  E-value=0.16  Score=42.63  Aligned_cols=113  Identities=13%  Similarity=0.171  Sum_probs=62.1

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC--cEEEEecCCHHHHHHHHHHHHHcC---CcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGC--KVLVNYARSSKEAEEVCKEIEASG---GQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~--~v~i~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      .+.|+|+ |.+|..++..|+..|.  +|++ .+++++.++.....+....   ....+..   ++.           +.+
T Consensus         2 kI~VIGa-G~vG~~la~~la~~g~~~eV~L-~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~~~-----------~a~   65 (304)
T 2v6b_A            2 KVGVVGT-GFVGSTAAFALVLRGSCSELVL-VDRDEDRAQAEAEDIAHAAPVSHGTRVWH---GGH-----------SEL   65 (304)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEE-ECSSHHHHHHHHHHHTTSCCTTSCCEEEE---ECG-----------GGG
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEE-EeCCHHHHHHHHHhhhhhhhhcCCeEEEE---CCH-----------HHh
Confidence            5889998 9999999999999997  7776 5888776655444443211   1111111   121           112


Q ss_pred             CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCc
Q 024338          103 GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVV  165 (269)
Q Consensus       103 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  165 (269)
                      ...|++|.+++.....      ...-.+.+..|..-...+.+.+.++   .+.+.++++|-..
T Consensus        66 ~~aDvVIi~~~~~~~~------g~~r~dl~~~n~~i~~~i~~~i~~~---~p~~~vi~~tNP~  119 (304)
T 2v6b_A           66 ADAQVVILTAGANQKP------GESRLDLLEKNADIFRELVPQITRA---APDAVLLVTSNPV  119 (304)
T ss_dssp             TTCSEEEECC------------------CHHHHHHHHHHHHHHHHHH---CSSSEEEECSSSH
T ss_pred             CCCCEEEEcCCCCCCC------CCcHHHHHHhHHHHHHHHHHHHHHh---CCCeEEEEecCch
Confidence            4789999999753221      1112234555555544444444443   3556677665543

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=95.58  E-value=0.11  Score=43.31  Aligned_cols=113  Identities=16%  Similarity=0.184  Sum_probs=67.1

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC--cEEEEecCCHHHHHHHHHHHHHc----CCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGC--KVLVNYARSSKEAEEVCKEIEAS----GGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~--~v~i~~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      .+.|+|+ |.+|.+++..|+..|.  ++++ .+++++.++....++...    .....+...  +|    .+.       
T Consensus         2 kI~ViGa-G~vG~~la~~l~~~~~~~~v~L-~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d----~~a-------   66 (294)
T 1oju_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIAL-VDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--AD----YSL-------   66 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEE-ECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SC----GGG-------
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEE-EECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CC----HHH-------
Confidence            4789999 9999999999999987  6666 688887765333333221    111122211  12    112       


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-CCCCeEEEEcCCc
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMK-KKKGRIINIASVV  165 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~iv~isS~~  165 (269)
                      +..-|++|.++|.....   ..+.   .+.++.|..-    .+.+.+.+.+ .+.+.++++|.-.
T Consensus        67 ~~~aDiVViaag~~~kp---G~~R---~dl~~~N~~i----~~~i~~~i~~~~p~a~iivvsNPv  121 (294)
T 1oju_A           67 LKGSEIIVVTAGLARKP---GMTR---LDLAHKNAGI----IKDIAKKIVENAPESKILVVTNPM  121 (294)
T ss_dssp             GTTCSEEEECCCCCCCS---SCCH---HHHHHHHHHH----HHHHHHHHHTTSTTCEEEECSSSH
T ss_pred             hCCCCEEEECCCCCCCC---CCcH---HHHHHHHHHH----HHHHHHHHHhhCCCeEEEEeCCcc
Confidence            23789999999965321   1233   3345566544    4555555443 4567788887644

>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A

Probab=95.57  E-value=0.028  Score=51.42  Aligned_cols=63  Identities=14%  Similarity=0.118  Sum_probs=45.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCC-------------------HHHHHHHHHHHHHcCC--cEEE
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARS-------------------SKEAEEVCKEIEASGG--QALT   80 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~-------------------~~~~~~~~~~l~~~~~--~~~~   80 (269)
                      ..++++.|+|.|++ |+|.++++.|+..|..-+.+++.+                   ..+.+.+++.+++...  ++..
T Consensus       323 ~kL~~~kVLIVGaG-GLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iNP~v~v~~  401 (598)
T 3vh1_A          323 DIIKNTKVLLLGAG-TLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATG  401 (598)
T ss_dssp             HHHHTCEEEEECCS-HHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHCTTCEEEE
T ss_pred             HHHhCCeEEEECCC-HHHHHHHHHHHHcCCCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHCCCcEEEE
Confidence            45678999999976 999999999999998755545433                   2466677777777544  4555


Q ss_pred             EEccC
Q 024338           81 FGGDV   85 (269)
Q Consensus        81 ~~~Dl   85 (269)
                      +..++
T Consensus       402 ~~~~I  406 (598)
T 3vh1_A          402 VKLSI  406 (598)
T ss_dssp             ECCCC
T ss_pred             Eeccc
Confidence            55444

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=95.37  E-value=0.033  Score=46.65  Aligned_cols=74  Identities=23%  Similarity=0.284  Sum_probs=51.3

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      ..++++|+++|.|+ |++|+++++.+...|++|++ ..|+.++.+.+.+    .+.+  .+.     .++++++      
T Consensus       152 ~~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~-~d~~~~~~~~~~~----~g~~--~~~-----~~~l~~~------  212 (300)
T 2rir_A          152 DYTIHGSQVAVLGL-GRTGMTIARTFAALGANVKV-GARSSAHLARITE----MGLV--PFH-----TDELKEH------  212 (300)
T ss_dssp             SSCSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEE-EESSHHHHHHHHH----TTCE--EEE-----GGGHHHH------
T ss_pred             CCCCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHH----CCCe--EEc-----hhhHHHH------
Confidence            35789999999996 89999999999999999888 5777765543322    2322  221     1222222      


Q ss_pred             hcCCccEEEEccCC
Q 024338          101 AWGTVDILINNAGI  114 (269)
Q Consensus       101 ~~~~id~li~~ag~  114 (269)
                       ....|+||++...
T Consensus       213 -l~~aDvVi~~~p~  225 (300)
T 2rir_A          213 -VKDIDICINTIPS  225 (300)
T ss_dssp             -STTCSEEEECCSS
T ss_pred             -hhCCCEEEECCCh
Confidence             2378999998864

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=95.28  E-value=0.31  Score=40.60  Aligned_cols=40  Identities=15%  Similarity=0.219  Sum_probs=33.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHH
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEV   67 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~   67 (269)
                      -+++.|.|+ |.+|..+|..|++.|++|++ ..++++.+++.
T Consensus        15 ~~~I~VIG~-G~mG~~iA~~la~~G~~V~~-~d~~~~~~~~~   54 (302)
T 1f0y_A           15 VKHVTVIGG-GLMGAGIAQVAAATGHTVVL-VDQTEDILAKS   54 (302)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEE-ECSCHHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEE-EECCHHHHHHH
Confidence            367999998 79999999999999999888 58888776654

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=95.27  E-value=0.23  Score=41.93  Aligned_cols=114  Identities=14%  Similarity=0.224  Sum_probs=67.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC--cEEEEecCCHHHHHHHHHHHHHcC---CcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGC--KVLVNYARSSKEAEEVCKEIEASG---GQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~--~v~i~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      ..+.|+|+ |.+|..++..++..+.  ++++ .+.++++++....++....   ..+.+. .|  +           .+.
T Consensus         6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L-~Di~~~~~~g~~~dl~~~~~~~~~~~v~-~~--~-----------~~a   69 (318)
T 1ez4_A            6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVI-VDVVKDRTKGDALDLEDAQAFTAPKKIY-SG--E-----------YSD   69 (318)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEE-ECSSHHHHHHHHHHHHGGGGGSCCCEEE-EC--C-----------GGG
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEE-EeCCchHHHHHHHHHHHHHHhcCCeEEE-EC--C-----------HHH
Confidence            57999999 9999999999998874  4555 6888887776666665431   222222 12  1           112


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-CCCCeEEEEcCCcc
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMK-KKKGRIINIASVVG  166 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~iv~isS~~~  166 (269)
                      +...|++|..+|......      ..-.+.+..|..-    .+.+.+.+.+ .+.+.++++|-...
T Consensus        70 ~~~aDvVii~ag~~~~~g------~~R~dl~~~n~~i----~~~i~~~i~~~~p~a~iiv~tNPv~  125 (318)
T 1ez4_A           70 CKDADLVVITAGAPQKPG------ESRLDLVNKNLNI----LSSIVKPVVDSGFDGIFLVAANPVD  125 (318)
T ss_dssp             GTTCSEEEECCCC----------------CHHHHHHH----HHHHHHHHHHTTCCSEEEECSSSHH
T ss_pred             hCCCCEEEECCCCCCCCC------CCHHHHHHHHHHH----HHHHHHHHHHhCCCeEEEEeCCcHH
Confidence            347899999998643211      1122344555444    4444444433 46778888765443

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=95.26  E-value=0.016  Score=48.04  Aligned_cols=45  Identities=33%  Similarity=0.510  Sum_probs=37.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHH
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCK   69 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~   69 (269)
                      ++++++++|.|+ |++|+++++.|.+.|++|.+ +.|+.++.+++.+
T Consensus       126 ~~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v-~~r~~~~~~~l~~  170 (275)
T 2hk9_A          126 EVKEKSILVLGA-GGASRAVIYALVKEGAKVFL-WNRTKEKAIKLAQ  170 (275)
T ss_dssp             TGGGSEEEEECC-SHHHHHHHHHHHHHTCEEEE-ECSSHHHHHHHTT
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHcCCEEEE-EECCHHHHHHHHH
Confidence            567899999996 79999999999999997766 6888877666554

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=95.25  E-value=0.22  Score=41.17  Aligned_cols=83  Identities=14%  Similarity=0.146  Sum_probs=56.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCC---cEEEEecCCHHHHHHHHHHH--------HH--cCCcEEEEEccCCCHHHHH
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGC---KVLVNYARSSKEAEEVCKEI--------EA--SGGQALTFGGDVSKEADVE   92 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~---~v~i~~~r~~~~~~~~~~~l--------~~--~~~~~~~~~~Dls~~~~~~   92 (269)
                      .+++.|.|+ |.+|.++++.|++.|+   +|.+ ..|+++..+++.+..        .+  ...++.++.+   .++.++
T Consensus         3 ~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v-~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav---~p~~~~   77 (280)
T 3tri_A            3 TSNITFIGG-GNMARNIVVGLIANGYDPNRICV-TNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAV---KPHQIK   77 (280)
T ss_dssp             CSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEE-ECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECS---CGGGHH
T ss_pred             CCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEE-EeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEe---CHHHHH
Confidence            456888888 7999999999999998   7877 588888777766531        00  1234434333   346677


Q ss_pred             HHHHHHHHh-cCCccEEEEccC
Q 024338           93 SMIKTAVDA-WGTVDILINNAG  113 (269)
Q Consensus        93 ~~~~~~~~~-~~~id~li~~ag  113 (269)
                      ++++++... +.+=.++|++++
T Consensus        78 ~vl~~l~~~~l~~~~iiiS~~a   99 (280)
T 3tri_A           78 MVCEELKDILSETKILVISLAV   99 (280)
T ss_dssp             HHHHHHHHHHHTTTCEEEECCT
T ss_pred             HHHHHHHhhccCCCeEEEEecC
Confidence            888887765 443237777765

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=95.25  E-value=0.055  Score=44.89  Aligned_cols=41  Identities=7%  Similarity=0.200  Sum_probs=35.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHH
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVC   68 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~   68 (269)
                      +++.|.|++|.+|..+++.|++.|++|++ ..|+++..+++.
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~-~~r~~~~~~~~~   52 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHHLAA-IEIAPEGRDRLQ   52 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSEEEE-ECCSHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEE-EECCHHHHHHHH
Confidence            57999999999999999999999999887 588887766554

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=95.23  E-value=0.22  Score=42.03  Aligned_cols=113  Identities=18%  Similarity=0.230  Sum_probs=65.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC--cEEEEecCCHHHHHHHHHHHHHc----CCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGC--KVLVNYARSSKEAEEVCKEIEAS----GGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~--~v~i~~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      .+.|+|+ |.+|..++..|+..|.  ++++ .+++++.++....++...    .....+...|..             +.
T Consensus         2 kv~ViGa-G~vG~~~a~~l~~~~~~~el~l-~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~~-------------~a   66 (314)
T 3nep_X            2 KVTVIGA-GNVGATVAECVARQDVAKEVVM-VDIKDGMPQGKALDMRESSPIHGFDTRVTGTNDY-------------GP   66 (314)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSSEEEE-ECSSTTHHHHHHHHHHHHHHHHTCCCEEEEESSS-------------GG
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEE-EeCchHHHHHHHHHHhccccccCCCcEEEECCCH-------------HH
Confidence            4789997 9999999999999986  5666 577776665444444321    122222211211             22


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-CCCCeEEEEcCCc
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMK-KKKGRIINIASVV  165 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~iv~isS~~  165 (269)
                      +..-|++|.++|.....      ...-.+.++.|..-    .+.+.+.+.+ .+.+.++++|...
T Consensus        67 ~~~aDvVii~ag~~~kp------G~~R~dl~~~N~~i----~~~i~~~i~~~~p~a~vivvtNPv  121 (314)
T 3nep_X           67 TEDSDVCIITAGLPRSP------GMSRDDLLAKNTEI----VGGVTEQFVEGSPDSTIIVVANPL  121 (314)
T ss_dssp             GTTCSEEEECCCC-------------CHHHHHHHHHH----HHHHHHHHHTTCTTCEEEECCSSH
T ss_pred             hCCCCEEEECCCCCCCC------CCCHHHHHHhhHHH----HHHHHHHHHHhCCCcEEEecCCch
Confidence            34789999999964321      11233455666554    4444444433 3567788887644

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=95.22  E-value=0.028  Score=46.39  Aligned_cols=35  Identities=17%  Similarity=0.161  Sum_probs=32.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecC
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYAR   59 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r   59 (269)
                      ++||.++|.|+++-+|+.+++.|..+|+.|.+. .+
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~-~~  182 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVC-HS  182 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEE-CT
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEE-eC
Confidence            899999999999999999999999999999884 44

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=95.22  E-value=0.024  Score=47.04  Aligned_cols=35  Identities=40%  Similarity=0.499  Sum_probs=32.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEE
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVN   56 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~   56 (269)
                      -+++||.++|.|.++-+|+.++..|+..|+.|.+.
T Consensus       157 i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~  191 (286)
T 4a5o_A          157 ADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVT  191 (286)
T ss_dssp             CCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEE
Confidence            57899999999999999999999999999999884

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=95.20  E-value=0.043  Score=44.97  Aligned_cols=70  Identities=31%  Similarity=0.439  Sum_probs=51.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      .++++ +++|.|+ |++|+++++.|.+.|+++.+ +.|+.++.+++.+++   +..       ..+.+   +    +   
T Consensus       113 ~~l~~-~v~iiG~-G~~g~~~a~~l~~~g~~v~v-~~r~~~~~~~l~~~~---~~~-------~~~~~---~----~---  169 (263)
T 2d5c_A          113 IPLKG-PALVLGA-GGAGRAVAFALREAGLEVWV-WNRTPQRALALAEEF---GLR-------AVPLE---K----A---  169 (263)
T ss_dssp             CCCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEE-ECSSHHHHHHHHHHH---TCE-------ECCGG---G----G---
T ss_pred             CCCCC-eEEEECC-cHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHh---ccc-------hhhHh---h----c---
Confidence            36788 8999997 77999999999999998776 688888777776655   221       11211   1    1   


Q ss_pred             cCCccEEEEccCCC
Q 024338          102 WGTVDILINNAGIT  115 (269)
Q Consensus       102 ~~~id~li~~ag~~  115 (269)
                       ...|+||++....
T Consensus       170 -~~~Divi~~tp~~  182 (263)
T 2d5c_A          170 -REARLLVNATRVG  182 (263)
T ss_dssp             -GGCSEEEECSSTT
T ss_pred             -cCCCEEEEccCCC
Confidence             2689999998753

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=95.17  E-value=0.065  Score=44.76  Aligned_cols=84  Identities=13%  Similarity=0.080  Sum_probs=56.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHH-------HHHcCCcEEEEEccCCCHHHHHHHHHHHH
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKE-------IEASGGQALTFGGDVSKEADVESMIKTAV   99 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~-------l~~~~~~~~~~~~Dls~~~~~~~~~~~~~   99 (269)
                      +++.|.| .|.+|..+++.|++.|++|++ ..|+++..+++.+.       +.+.-. ..++..-+.+...++.+++++.
T Consensus        16 ~~I~vIG-~G~mG~~~A~~l~~~G~~V~~-~dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi~~vp~~~~~~~v~~~l~   92 (296)
T 3qha_A           16 LKLGYIG-LGNMGAPMATRMTEWPGGVTV-YDIRIEAMTPLAEAGATLADSVADVAA-ADLIHITVLDDAQVREVVGELA   92 (296)
T ss_dssp             CCEEEEC-CSTTHHHHHHHHTTSTTCEEE-ECSSTTTSHHHHHTTCEECSSHHHHTT-SSEEEECCSSHHHHHHHHHHHH
T ss_pred             CeEEEEC-cCHHHHHHHHHHHHCCCeEEE-EeCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEEEECCChHHHHHHHHHHH
Confidence            4577777 579999999999999999988 58887765554331       111111 2234445566777888888877


Q ss_pred             HhcCCccEEEEccC
Q 024338          100 DAWGTVDILINNAG  113 (269)
Q Consensus       100 ~~~~~id~li~~ag  113 (269)
                      ....+=.++|++..
T Consensus        93 ~~l~~g~ivv~~st  106 (296)
T 3qha_A           93 GHAKPGTVIAIHST  106 (296)
T ss_dssp             TTCCTTCEEEECSC
T ss_pred             HhcCCCCEEEEeCC
Confidence            66555566776654

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=95.09  E-value=0.036  Score=46.33  Aligned_cols=37  Identities=30%  Similarity=0.279  Sum_probs=33.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecC
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYAR   59 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r   59 (269)
                      -+++||.++|.|.++-+|+.+++.|...|+.|.+. .|
T Consensus       161 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~-~~  197 (300)
T 4a26_A          161 IEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIV-HS  197 (300)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEE-CT
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEE-eC
Confidence            57899999999999999999999999999999884 54

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=95.06  E-value=0.03  Score=47.69  Aligned_cols=72  Identities=14%  Similarity=0.114  Sum_probs=53.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTV  105 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i  105 (269)
                      .+.++|.|+ |.+|..+++.|.++|. +++ ..++++..+ +.+      ..+.++.+|.+|++.++++      ...+.
T Consensus       115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~v-id~~~~~~~-~~~------~~~~~i~gd~~~~~~L~~a------~i~~a  178 (336)
T 1lnq_A          115 SRHVVICGW-SESTLECLRELRGSEV-FVL-AEDENVRKK-VLR------SGANFVHGDPTRVSDLEKA------NVRGA  178 (336)
T ss_dssp             -CEEEEESC-CHHHHHHHTTGGGSCE-EEE-ESCGGGHHH-HHH------TTCEEEESCTTSHHHHHHT------CSTTE
T ss_pred             cCCEEEECC-cHHHHHHHHHHHhCCc-EEE-EeCChhhhh-HHh------CCcEEEEeCCCCHHHHHhc------Chhhc
Confidence            457999997 8999999999999999 777 588887665 322      3567899999998876654      11267


Q ss_pred             cEEEEccC
Q 024338          106 DILINNAG  113 (269)
Q Consensus       106 d~li~~ag  113 (269)
                      |.+|.+.+
T Consensus       179 ~~vi~~~~  186 (336)
T 1lnq_A          179 RAVIVDLE  186 (336)
T ss_dssp             EEEEECCS
T ss_pred             cEEEEcCC
Confidence            77776653

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=95.05  E-value=0.22  Score=41.83  Aligned_cols=72  Identities=10%  Similarity=0.114  Sum_probs=47.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-cEEEEecCCHHHHHHHHHHHHHc------CCcEEEEEccCCCHHHHHHHHHHHH
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGC-KVLVNYARSSKEAEEVCKEIEAS------GGQALTFGGDVSKEADVESMIKTAV   99 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~-~v~i~~~r~~~~~~~~~~~l~~~------~~~~~~~~~Dls~~~~~~~~~~~~~   99 (269)
                      +.+.|+|+ |.+|..++..|+..|. ++++ .+.+++.++....++...      ..++... .|.              
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L-~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t-~d~--------------   65 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVL-LDIVEGVPQGKALDLYEASPIEGFDVRVTGT-NNY--------------   65 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEE-ECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE-SCG--------------
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEE-EeCCccHHHHHHHhHHHhHhhcCCCeEEEEC-CCH--------------
Confidence            46899999 9999999999999996 7444 687776665544444331      1222211 221              


Q ss_pred             HhcCCccEEEEccCCC
Q 024338          100 DAWGTVDILINNAGIT  115 (269)
Q Consensus       100 ~~~~~id~li~~ag~~  115 (269)
                      +.+...|++|.++|..
T Consensus        66 ~a~~~aD~Vi~a~g~p   81 (309)
T 1ur5_A           66 ADTANSDVIVVTSGAP   81 (309)
T ss_dssp             GGGTTCSEEEECCCC-
T ss_pred             HHHCCCCEEEEcCCCC
Confidence            1123789999999864

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=94.99  E-value=0.066  Score=44.38  Aligned_cols=83  Identities=22%  Similarity=0.225  Sum_probs=55.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHH-------HHHc--CCcEEEEEccCCCHHHHHHHH--
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKE-------IEAS--GGQALTFGGDVSKEADVESMI--   95 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~-------l~~~--~~~~~~~~~Dls~~~~~~~~~--   95 (269)
                      +++.|.|+ |.+|..+++.|++.|++|++ ..|+++..+++.+.       +.+.  ..+  ++..-+.+...++.++  
T Consensus         2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~~-~dr~~~~~~~~~~~g~~~~~~~~~~~~~aD--vvi~~vp~~~~~~~v~~~   77 (287)
T 3pef_A            2 QKFGFIGL-GIMGSAMAKNLVKAGCSVTI-WNRSPEKAEELAALGAERAATPCEVVESCP--VTFAMLADPAAAEEVCFG   77 (287)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEE-ECSSGGGGHHHHHTTCEECSSHHHHHHHCS--EEEECCSSHHHHHHHHHS
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCeEEE-EcCCHHHHHHHHHCCCeecCCHHHHHhcCC--EEEEEcCCHHHHHHHHcC
Confidence            46788885 79999999999999999887 58888766554431       1100  122  3333455667777777  


Q ss_pred             -HHHHHhcCCccEEEEccC
Q 024338           96 -KTAVDAWGTVDILINNAG  113 (269)
Q Consensus        96 -~~~~~~~~~id~li~~ag  113 (269)
                       +++.....+=.++|++.+
T Consensus        78 ~~~l~~~l~~~~~vi~~st   96 (287)
T 3pef_A           78 KHGVLEGIGEGRGYVDMST   96 (287)
T ss_dssp             TTCHHHHCCTTCEEEECSC
T ss_pred             cchHhhcCCCCCEEEeCCC
Confidence             677665544456776654

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=94.98  E-value=0.18  Score=43.43  Aligned_cols=86  Identities=17%  Similarity=0.237  Sum_probs=53.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHH-----------HHHc-CCcEEEEEccCCCHHHH
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKE-----------IEAS-GGQALTFGGDVSKEADV   91 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~-----------l~~~-~~~~~~~~~Dls~~~~~   91 (269)
                      ++++++.|+| .|.+|..+++.|++.|+.|.+ ..|+++..+++.+.           +... ..++.++  =+.+. .+
T Consensus        20 m~~mkIgiIG-lG~mG~~~A~~L~~~G~~V~v-~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~--~vp~~-~v   94 (358)
T 4e21_A           20 FQSMQIGMIG-LGRMGADMVRRLRKGGHECVV-YDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWL--MVPAA-VV   94 (358)
T ss_dssp             --CCEEEEEC-CSHHHHHHHHHHHHTTCEEEE-ECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEE--CSCGG-GH
T ss_pred             hcCCEEEEEC-chHHHHHHHHHHHhCCCEEEE-EeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEE--eCCHH-HH
Confidence            4567888998 579999999999999999888 58888776654321           1111 1133332  22222 56


Q ss_pred             HHHHHHHHHhcCCccEEEEccCC
Q 024338           92 ESMIKTAVDAWGTVDILINNAGI  114 (269)
Q Consensus        92 ~~~~~~~~~~~~~id~li~~ag~  114 (269)
                      +.+++++.....+=+++|.+...
T Consensus        95 ~~vl~~l~~~l~~g~iiId~st~  117 (358)
T 4e21_A           95 DSMLQRMTPLLAANDIVIDGGNS  117 (358)
T ss_dssp             HHHHHHHGGGCCTTCEEEECSSC
T ss_pred             HHHHHHHHhhCCCCCEEEeCCCC
Confidence            66666666655444566666543

>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}

Probab=94.98  E-value=0.52  Score=40.42  Aligned_cols=46  Identities=24%  Similarity=0.280  Sum_probs=35.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCK   69 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~   69 (269)
                      |....+.+.|.|+ |.+|.+++..|++.|++|.+ ..|+++..+++.+
T Consensus        25 m~~~~mkI~VIGa-G~mG~alA~~La~~G~~V~l-~~r~~~~~~~i~~   70 (356)
T 3k96_A           25 MEPFKHPIAILGA-GSWGTALALVLARKGQKVRL-WSYESDHVDEMQA   70 (356)
T ss_dssp             --CCCSCEEEECC-SHHHHHHHHHHHTTTCCEEE-ECSCHHHHHHHHH
T ss_pred             ccccCCeEEEECc-cHHHHHHHHHHHHCCCeEEE-EeCCHHHHHHHHH
Confidence            3334456889987 79999999999999999988 5888877666544

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=94.92  E-value=0.0085  Score=50.71  Aligned_cols=83  Identities=13%  Similarity=0.081  Sum_probs=52.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEE-EEEccCCCHHHHHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQAL-TFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~-~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      -+++||+++|.|++.-+|+.+|+.|+..|+.|.+ +.|+.....+..+++.   .... ......++.+++.+.+.    
T Consensus       173 ~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv-~nR~~~~l~~ra~~la---~~~~~~t~~~~t~~~~L~e~l~----  244 (320)
T 1edz_A          173 NRLYGKKCIVINRSEIVGRPLAALLANDGATVYS-VDVNNIQKFTRGESLK---LNKHHVEDLGEYSEDLLKKCSL----  244 (320)
T ss_dssp             CTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEE-ECSSEEEEEESCCCSS---CCCCEEEEEEECCHHHHHHHHH----
T ss_pred             CCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEE-EeCchHHHHhHHHHHh---hhcccccccccccHhHHHHHhc----
Confidence            3789999999999988999999999999999887 4665221111111110   1000 11111134456666555    


Q ss_pred             hcCCccEEEEccCCC
Q 024338          101 AWGTVDILINNAGIT  115 (269)
Q Consensus       101 ~~~~id~li~~ag~~  115 (269)
                         .-|+||.+.|..
T Consensus       245 ---~ADIVIsAtg~p  256 (320)
T 1edz_A          245 ---DSDVVITGVPSE  256 (320)
T ss_dssp             ---HCSEEEECCCCT
T ss_pred             ---cCCEEEECCCCC
Confidence               579999999853

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=94.91  E-value=0.028  Score=46.65  Aligned_cols=37  Identities=35%  Similarity=0.372  Sum_probs=33.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecC
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYAR   59 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r   59 (269)
                      -+++||.++|.|.++-+|+.+++.|..+|+.|.+. .+
T Consensus       157 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~-hs  193 (285)
T 3l07_A          157 IKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTC-HR  193 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEE-CT
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEE-eC
Confidence            47899999999999999999999999999998884 44

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=94.91  E-value=0.017  Score=48.95  Aligned_cols=74  Identities=20%  Similarity=0.329  Sum_probs=45.8

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCccE
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDI  107 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~  107 (269)
                      ++||+||+|++|..+++.+...|++|+++ .+++++++. ++++   +.+. ++  |..+.+  .+.++++  ..+++|+
T Consensus       153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~-~~~~~~~~~-~~~l---Ga~~-v~--~~~~~~--~~~~~~~--~~~~~d~  220 (330)
T 1tt7_A          153 SVLVTGATGGVGGIAVSMLNKRGYDVVAS-TGNREAADY-LKQL---GASE-VI--SREDVY--DGTLKAL--SKQQWQG  220 (330)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHHTCCEEEE-ESSSSTHHH-HHHH---TCSE-EE--EHHHHC--SSCCCSS--CCCCEEE
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEE-eCCHHHHHH-HHHc---CCcE-EE--ECCCch--HHHHHHh--hcCCccE
Confidence            79999999999999999999999998875 555544433 3333   3332 12  211110  0111111  1136999


Q ss_pred             EEEccC
Q 024338          108 LINNAG  113 (269)
Q Consensus       108 li~~ag  113 (269)
                      +|.++|
T Consensus       221 vid~~g  226 (330)
T 1tt7_A          221 AVDPVG  226 (330)
T ss_dssp             EEESCC
T ss_pred             EEECCc
Confidence            999998

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=94.90  E-value=0.43  Score=40.10  Aligned_cols=114  Identities=13%  Similarity=0.144  Sum_probs=69.1

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcC--CcEEEEecCCHHHHHHHHHHHHHcC---CcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           28 VAVVTGASRGIGRAVATSLGKAG--CKVLVNYARSSKEAEEVCKEIEASG---GQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G--~~v~i~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      .+.|+|+ |.+|..++..++..+  .++++ .+.++++++....++....   .++.+.. |  +.+           .+
T Consensus         2 KI~IiGa-G~vG~~~a~~l~~~~~~~el~L-~Di~~~k~~g~a~dl~~~~~~~~~~~v~~-~--~~~-----------a~   65 (310)
T 2xxj_A            2 KVGIVGS-GMVGSATAYALALLGVAREVVL-VDLDRKLAQAHAEDILHATPFAHPVWVWA-G--SYG-----------DL   65 (310)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEE-ECSSHHHHHHHHHHHHTTGGGSCCCEEEE-C--CGG-----------GG
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEE-EeCChhHHHHHHHHHHHhHhhcCCeEEEE-C--CHH-----------Hh
Confidence            5889998 999999999999887  45555 6888877776666665421   1222221 2  211           12


Q ss_pred             CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcc
Q 024338          103 GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVG  166 (269)
Q Consensus       103 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  166 (269)
                      ...|++|..+|.....   ..+.+   ..+..|..-...+.+.+.++   .+.+.++++|--..
T Consensus        66 ~~aD~Vii~ag~~~~~---g~~r~---dl~~~n~~i~~~i~~~i~~~---~p~a~iiv~tNPv~  120 (310)
T 2xxj_A           66 EGARAVVLAAGVAQRP---GETRL---QLLDRNAQVFAQVVPRVLEA---APEAVLLVATNPVD  120 (310)
T ss_dssp             TTEEEEEECCCCCCCT---TCCHH---HHHHHHHHHHHHHHHHHHHH---CTTCEEEECSSSHH
T ss_pred             CCCCEEEECCCCCCCC---CcCHH---HHHHhhHHHHHHHHHHHHHH---CCCcEEEEecCchH
Confidence            3789999999864321   22332   34555555433344333332   46788888866443

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=94.87  E-value=0.036  Score=46.00  Aligned_cols=35  Identities=37%  Similarity=0.436  Sum_probs=32.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEE
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVN   56 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~   56 (269)
                      -+++||.++|.|++.-+|+.+++.|+.+|+.|.+.
T Consensus       155 i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~  189 (288)
T 1b0a_A          155 IDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVT  189 (288)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEE
T ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEE
Confidence            47899999999999999999999999999999984

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=94.83  E-value=0.035  Score=46.87  Aligned_cols=73  Identities=22%  Similarity=0.276  Sum_probs=47.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTV  105 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i  105 (269)
                      ++ +||+|++|++|...++.+...|++|+++ .+++++.+.+ +++   +.+..+-.-|...       ++++  ..+++
T Consensus       148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~-~~~~~~~~~~-~~l---Ga~~vi~~~~~~~-------~~~~--~~~~~  212 (324)
T 3nx4_A          148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAV-SGRESTHGYL-KSL---GANRILSRDEFAE-------SRPL--EKQLW  212 (324)
T ss_dssp             CC-EEESSTTSHHHHHHHHHHHHTTCCEEEE-ESCGGGHHHH-HHH---TCSEEEEGGGSSC-------CCSS--CCCCE
T ss_pred             Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEE-eCCHHHHHHH-Hhc---CCCEEEecCCHHH-------HHhh--cCCCc
Confidence            46 9999999999999999999999998885 5666555433 333   4433222222211       1111  11479


Q ss_pred             cEEEEccC
Q 024338          106 DILINNAG  113 (269)
Q Consensus       106 d~li~~ag  113 (269)
                      |++|.++|
T Consensus       213 d~v~d~~g  220 (324)
T 3nx4_A          213 AGAIDTVG  220 (324)
T ss_dssp             EEEEESSC
T ss_pred             cEEEECCC
Confidence            99999886

>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36

Probab=94.77  E-value=0.19  Score=39.25  Aligned_cols=77  Identities=14%  Similarity=0.104  Sum_probs=53.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHH-------------cCCcEEEEEccCCCHHHH
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEA-------------SGGQALTFGGDVSKEADV   91 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~-------------~~~~~~~~~~Dls~~~~~   91 (269)
                      ++++||..|++.|.   .+..|+++|++|+. +..++..++...+....             ...++.++.+|+.+...-
T Consensus        22 ~~~~vLD~GCG~G~---~~~~la~~g~~V~g-vD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~   97 (203)
T 1pjz_A           22 PGARVLVPLCGKSQ---DMSWLSGQGYHVVG-AELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTAR   97 (203)
T ss_dssp             TTCEEEETTTCCSH---HHHHHHHHCCEEEE-EEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHH
T ss_pred             CCCEEEEeCCCCcH---hHHHHHHCCCeEEE-EeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcc
Confidence            57899999998774   34567778999888 47787777665554321             134688899999875421


Q ss_pred             HHHHHHHHHhcCCccEEEEccCC
Q 024338           92 ESMIKTAVDAWGTVDILINNAGI  114 (269)
Q Consensus        92 ~~~~~~~~~~~~~id~li~~ag~  114 (269)
                      .         .+.+|+++.+...
T Consensus        98 ~---------~~~fD~v~~~~~l  111 (203)
T 1pjz_A           98 D---------IGHCAAFYDRAAM  111 (203)
T ss_dssp             H---------HHSEEEEEEESCG
T ss_pred             c---------CCCEEEEEECcch
Confidence            1         1378999876644

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=94.75  E-value=0.03  Score=48.58  Aligned_cols=70  Identities=19%  Similarity=0.209  Sum_probs=49.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHH-HHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSK-EAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~-~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      +.+.+|+++|.|+ |.+|+.+++.+.+.|.+++++ ..++. ....+       ..  ..+..|..|.+.+.++++    
T Consensus         8 ~~~~~~~IlIlG~-G~lg~~la~aa~~lG~~viv~-d~~~~~p~~~~-------ad--~~~~~~~~d~~~l~~~~~----   72 (377)
T 3orq_A            8 KLKFGATIGIIGG-GQLGKMMAQSAQKMGYKVVVL-DPSEDCPCRYV-------AH--EFIQAKYDDEKALNQLGQ----   72 (377)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEE-ESCTTCTTGGG-------SS--EEEECCTTCHHHHHHHHH----
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEE-ECCCCChhhhh-------CC--EEEECCCCCHHHHHHHHH----
Confidence            3467899999986 479999999999999999885 44332 11111       11  246688999888877765    


Q ss_pred             hcCCccEEE
Q 024338          101 AWGTVDILI  109 (269)
Q Consensus       101 ~~~~id~li  109 (269)
                         .+|+++
T Consensus        73 ---~~dvi~   78 (377)
T 3orq_A           73 ---KCDVIT   78 (377)
T ss_dssp             ---HCSEEE
T ss_pred             ---hCCcce
Confidence               357664

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=94.73  E-value=0.59  Score=39.17  Aligned_cols=112  Identities=21%  Similarity=0.207  Sum_probs=66.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHHc--CCcEEEEecCCHHHHHHHHHHHHHc------CCcEEEEEccCCCHHHHHHHHHHHH
Q 024338           28 VAVVTGASRGIGRAVATSLGKA--GCKVLVNYARSSKEAEEVCKEIEAS------GGQALTFGGDVSKEADVESMIKTAV   99 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~--G~~v~i~~~r~~~~~~~~~~~l~~~------~~~~~~~~~Dls~~~~~~~~~~~~~   99 (269)
                      .+.|+|+ |.+|..++..|+..  |.+|++ .+++++.++....++...      ..++.. ..|   .+          
T Consensus         2 kI~VIGa-G~vG~~la~~la~~~~g~~V~l-~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-t~d---~~----------   65 (310)
T 1guz_A            2 KITVIGA-GNVGATTAFRLAEKQLARELVL-LDVVEGIPQGKALDMYESGPVGLFDTKVTG-SND---YA----------   65 (310)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEE-ECSSSSHHHHHHHHHHTTHHHHTCCCEEEE-ESC---GG----------
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEE-EeCChhHHHHHHHhHHhhhhcccCCcEEEE-CCC---HH----------
Confidence            4789998 99999999999985  677777 578877666544333221      112211 122   11          


Q ss_pred             HhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCc
Q 024338          100 DAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVV  165 (269)
Q Consensus       100 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  165 (269)
                       .+...|++|.+++.....   ..+   -...++.|..-...+.+.+.++   .+.+.+++++...
T Consensus        66 -~l~~aDvViiav~~p~~~---g~~---r~dl~~~n~~i~~~i~~~i~~~---~~~~~viv~tNP~  121 (310)
T 1guz_A           66 -DTANSDIVIITAGLPRKP---GMT---REDLLMKNAGIVKEVTDNIMKH---SKNPIIIVVSNPL  121 (310)
T ss_dssp             -GGTTCSEEEECCSCCCCT---TCC---HHHHHHHHHHHHHHHHHHHHHH---CSSCEEEECCSSH
T ss_pred             -HHCCCCEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHHh---CCCcEEEEEcCch
Confidence             123789999999853211   111   2345666666555555555544   3567777776543

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*

Probab=94.69  E-value=0.9  Score=39.20  Aligned_cols=119  Identities=16%  Similarity=0.135  Sum_probs=68.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCc-----EEE-EecC--CHHHHHHHHHHHHHcCC-cEEEEEccCCCHHHHHHHHH
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCK-----VLV-NYAR--SSKEAEEVCKEIEASGG-QALTFGGDVSKEADVESMIK   96 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~-----v~i-~~~r--~~~~~~~~~~~l~~~~~-~~~~~~~Dls~~~~~~~~~~   96 (269)
                      ...|.|+||+|.+|.+++-.++..+.-     +++ +...  ..+.++-..-++..... -...+  .+++.        
T Consensus        32 ~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v--~i~~~--------  101 (375)
T 7mdh_A           32 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREV--SIGID--------  101 (375)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEE--EEESC--------
T ss_pred             CCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCc--EEecC--------
Confidence            457999999999999999999988641     433 2222  33445545555554321 11111  11211        


Q ss_pred             HHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--CCCCeEEEEcCCc
Q 024338           97 TAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMK--KKKGRIINIASVV  165 (269)
Q Consensus        97 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~--~~~~~iv~isS~~  165 (269)
                       -.+.+...|++|..||.....   ..+   -.+.++.|..=    .+.+.+.+.+  .+++.++++|.-.
T Consensus       102 -~y~~~~daDvVVitag~prkp---G~t---R~DLl~~N~~I----~k~i~~~i~~~a~p~~ivlVvsNPv  161 (375)
T 7mdh_A          102 -PYEVFEDVDWALLIGAKPRGP---GME---RAALLDINGQI----FADQGKALNAVASKNVKVLVVGNPC  161 (375)
T ss_dssp             -HHHHTTTCSEEEECCCCCCCT---TCC---HHHHHHHHHHH----HHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred             -CHHHhCCCCEEEEcCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHHHhcCCCeEEEEecCch
Confidence             122234789999999864321   122   34566666654    4445454443  4677888887643

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=94.69  E-value=0.14  Score=42.72  Aligned_cols=80  Identities=11%  Similarity=0.064  Sum_probs=50.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTV  105 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i  105 (269)
                      .+++.|.||.|.+|.++++.|.+.|++|.+. .|+++.  ...+.+  ...++.++.+-.   +.+.++++++.....+=
T Consensus        21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~-~~~~~~--~~~~~~--~~aDvVilavp~---~~~~~vl~~l~~~l~~~   92 (298)
T 2pv7_A           21 IHKIVIVGGYGKLGGLFARYLRASGYPISIL-DREDWA--VAESIL--ANADVVIVSVPI---NLTLETIERLKPYLTEN   92 (298)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTTCCEEEE-CTTCGG--GHHHHH--TTCSEEEECSCG---GGHHHHHHHHGGGCCTT
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEE-ECCccc--CHHHHh--cCCCEEEEeCCH---HHHHHHHHHHHhhcCCC
Confidence            3579999999999999999999999998884 666432  111112  134555554432   23667777775544332


Q ss_pred             cEEEEccC
Q 024338          106 DILINNAG  113 (269)
Q Consensus       106 d~li~~ag  113 (269)
                      .+|+.+++
T Consensus        93 ~iv~~~~s  100 (298)
T 2pv7_A           93 MLLADLTS  100 (298)
T ss_dssp             SEEEECCS
T ss_pred             cEEEECCC
Confidence            34555544

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=94.68  E-value=0.097  Score=43.24  Aligned_cols=78  Identities=19%  Similarity=0.322  Sum_probs=56.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHc-CCcEEEEecCCHH---------------------HHHHHHHHHHHcCCcEEEEEcc
Q 024338           27 PVAVVTGASRGIGRAVATSLGKA-GCKVLVNYARSSK---------------------EAEEVCKEIEASGGQALTFGGD   84 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~-G~~v~i~~~r~~~---------------------~~~~~~~~l~~~~~~~~~~~~D   84 (269)
                      .+|.|+|++|.+|+.+++.+.++ +.+++..+.++.+                     .++++.+   .  .+   +..|
T Consensus         8 ikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~~gv~v~~dl~~ll~---~--~D---VVID   79 (272)
T 4f3y_A            8 MKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQTGVALTDDIERVCA---E--AD---YLID   79 (272)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCCCSCBCBCCHHHHHH---H--CS---EEEE
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCCCCceecCCHHHHhc---C--CC---EEEE
Confidence            46999999999999999999876 5666665566532                     1222222   1  22   4568


Q ss_pred             CCCHHHHHHHHHHHHHhcCCccEEEEccCC
Q 024338           85 VSKEADVESMIKTAVDAWGTVDILINNAGI  114 (269)
Q Consensus        85 ls~~~~~~~~~~~~~~~~~~id~li~~ag~  114 (269)
                      +|.++...+.+..+.+.  ++++|+-+.|.
T Consensus        80 fT~p~a~~~~~~~al~~--G~~vVigTTG~  107 (272)
T 4f3y_A           80 FTLPEGTLVHLDAALRH--DVKLVIGTTGF  107 (272)
T ss_dssp             CSCHHHHHHHHHHHHHH--TCEEEECCCCC
T ss_pred             cCCHHHHHHHHHHHHHc--CCCEEEECCCC
Confidence            99999998888888777  78899888774

>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}

Probab=94.66  E-value=0.082  Score=46.37  Aligned_cols=48  Identities=21%  Similarity=0.259  Sum_probs=39.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecC----------CHHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYAR----------SSKEAEEVCKE   70 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r----------~~~~~~~~~~~   70 (269)
                      .+++||++.|+| .|.+|..+++.|.+.|++|+.+.++          +.+.+.++.++
T Consensus       214 ~~l~gk~vaVqG-~GnVG~~~a~~L~~~GakVVavsD~~G~i~dp~Gld~~~l~~~~~~  271 (419)
T 3aoe_E          214 LDLRGARVVVQG-LGQVGAAVALHAERLGMRVVAVATSMGGMYAPEGLDVAEVLSAYEA  271 (419)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHH
T ss_pred             CCccCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEEcCCCeEECCCCCCHHHHHHHHHh
Confidence            478999999998 7899999999999999999955666          66666666654

>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}

Probab=94.66  E-value=0.32  Score=43.63  Aligned_cols=42  Identities=21%  Similarity=0.349  Sum_probs=34.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHH
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKE   70 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~   70 (269)
                      +++.|.|+ |.+|..+|..|++.|+.|++ ..++++.+++..+.
T Consensus         6 ~kVgVIGa-G~MG~~IA~~la~aG~~V~l-~D~~~e~l~~~~~~   47 (483)
T 3mog_A            6 QTVAVIGS-GTMGAGIAEVAASHGHQVLL-YDISAEALTRAIDG   47 (483)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCEEE-ECSCHHHHHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCeEEE-EECCHHHHHHHHHH
Confidence            45667766 79999999999999999988 58998887776554

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=94.61  E-value=0.79  Score=35.67  Aligned_cols=75  Identities=15%  Similarity=0.193  Sum_probs=51.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCC--cEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGG--QALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      .++++|-.|+..|.   ++..+++++.+|+. +..+++..+...+.++..+.  ++.++..|+.+.-          ...
T Consensus        55 ~~~~vLDlGcG~G~---~~~~la~~~~~v~~-vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~----------~~~  120 (204)
T 3njr_A           55 RGELLWDIGGGSGS---VSVEWCLAGGRAIT-IEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAAL----------ADL  120 (204)
T ss_dssp             TTCEEEEETCTTCH---HHHHHHHTTCEEEE-EESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGG----------TTS
T ss_pred             CCCEEEEecCCCCH---HHHHHHHcCCEEEE-EeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhc----------ccC
Confidence            57899999997653   34445555888877 57888877776666665543  6899999987521          122


Q ss_pred             CCccEEEEccC
Q 024338          103 GTVDILINNAG  113 (269)
Q Consensus       103 ~~id~li~~ag  113 (269)
                      +++|.++.+.+
T Consensus       121 ~~~D~v~~~~~  131 (204)
T 3njr_A          121 PLPEAVFIGGG  131 (204)
T ss_dssp             CCCSEEEECSC
T ss_pred             CCCCEEEECCc
Confidence            47899997663

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=94.60  E-value=0.037  Score=46.26  Aligned_cols=35  Identities=23%  Similarity=0.184  Sum_probs=32.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEE
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVN   56 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~   56 (269)
                      .+++||.++|.|++.-+|+.+++.|..+|+.|.+.
T Consensus       161 i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~  195 (301)
T 1a4i_A          161 VPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTC  195 (301)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEE
Confidence            47899999999999999999999999999999884

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	269
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	7e-85
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	4e-81
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	1e-79
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	1e-77
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	2e-76
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	7e-75
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	1e-73
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	6e-73
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	7e-73
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	1e-72
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	3e-72
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	4e-72
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	1e-71
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	2e-70
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	3e-69
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	4e-69
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	4e-69
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	5e-69
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	6e-69
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	6e-69
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	6e-68
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	1e-67
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	2e-67
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	7e-67
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	1e-66
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	1e-65
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	4e-65
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	4e-65
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	7e-65
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	1e-64
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	2e-64
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	7e-64
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	1e-63
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	1e-63
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	1e-63
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	6e-63
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	7e-63
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	9e-62
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	1e-61
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	3e-61
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	1e-59
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	1e-59
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	1e-59
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	4e-59
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	5e-59
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	1e-58
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-58
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-58
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	4e-53
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	1e-52
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	2e-50
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	9e-50
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	1e-49
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	4e-47
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	6e-47
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	4e-46
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	3e-42
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-41
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	8e-39
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	2e-38
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	2e-35
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	2e-34
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	3e-32
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	5e-28
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	8e-26
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	4e-22
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	1e-20
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	1e-19
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	0.001

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score =  251 bits (643), Expect = 7e-85
 Identities = 199/243 (81%), Positives = 223/243 (91%)

Query: 27  PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVS 86
           PV VVTGASRGIG+A+A SLGKAGCKVLVNYARS+K AEEV K+IEA GGQA+TFGGDVS
Sbjct: 2   PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVS 61

Query: 87  KEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
           KEADVE+M+KTA+DAWGT+D+++NNAGITRDTLL+RMKKSQW +VIDLNLTGVFLCTQAA
Sbjct: 62  KEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAA 121

Query: 147 AKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
            KIMMKK+KGRIINIASVVGL+GNIGQANY+AAKAGVIG +KT A+E ASRNINVN + P
Sbjct: 122 TKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCP 181

Query: 207 GFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGG 266
           GFIASDMTAKLGED+EKKIL  IPLGR GQPE VAGLVEFLAL+PAA YITGQ  TIDGG
Sbjct: 182 GFIASDMTAKLGEDMEKKILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQAFTIDGG 241

Query: 267 MVM 269
           + +
Sbjct: 242 IAI 244

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score =  242 bits (619), Expect = 4e-81
 Identities = 80/244 (32%), Positives = 117/244 (47%), Gaps = 6/244 (2%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           +AV+TG + GIGRA+A      G  + +     + EAE     I   G + LT   DVS+
Sbjct: 7   LAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---AIRNLGRRVLTVKCDVSQ 63

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
             DVE+  K  +  +G  DIL+NNAGI        +   QW+   ++N+   FL  +A  
Sbjct: 64  PGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFV 123

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
             M +   GRIIN+ S    +      +Y + KA  IG T+ +A +     I VNAIAP 
Sbjct: 124 PGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPS 183

Query: 208 FIASDMTAKLGEDLEKKILEKI--PLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDG 265
            + +  T          +L  +   + R   P ++ G   FLA +  A +ITGQ L +DG
Sbjct: 184 LVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLA-SDDASFITGQTLAVDG 242

Query: 266 GMVM 269
           GMV 
Sbjct: 243 GMVR 246

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score =  238 bits (609), Expect = 1e-79
 Identities = 87/246 (35%), Positives = 133/246 (54%), Gaps = 14/246 (5%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
             +VTG +RGIGRA+A +  + G  V +   R   E +EV + I  +  Q      D+  
Sbjct: 7   GVLVTGGARGIGRAIAQAFAREGALVALCDLR--PEGKEVAEAIGGAFFQV-----DLED 59

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
           E +    ++ A  A G VD+L+NNA I      + ++  +W+ V+++NLT     +  AA
Sbjct: 60  ERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAA 119

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
           + M K   G I+N+ASV GL      A Y+A+K G++ LT+++A + A   I VNA+APG
Sbjct: 120 REMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPG 179

Query: 208 FIASDMTAKL------GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL 261
            IA++   +        E   +   +   L R G+PEEVA  V FLA +  A +ITG +L
Sbjct: 180 AIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLA-SEKASFITGAIL 238

Query: 262 TIDGGM 267
            +DGGM
Sbjct: 239 PVDGGM 244

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score =  233 bits (596), Expect = 1e-77
 Identities = 126/240 (52%), Positives = 169/240 (70%), Gaps = 2/240 (0%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA+VTGA RGIGR +A  L K+   V+   +R+ K  + V  EI++ G ++  + GDVSK
Sbjct: 12  VALVTGAGRGIGREIAKMLAKSVSHVIC-ISRTQKSCDSVVDEIKSFGYESSGYAGDVSK 70

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
           + ++  +I   +     VDIL+NNAGITRD L +RMK  +W+DV+  NL  +F  TQ  +
Sbjct: 71  KEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPIS 130

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
           K M+  + GRIINI+S+VGL GN+GQANYS++KAGVIG TK++AKE ASRNI VNAIAPG
Sbjct: 131 KRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPG 190

Query: 208 FIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM 267
           FI+SDMT K+ E ++K I+  IP GR G PEEVA L  FL+ +  +GYI G+V  IDGG+
Sbjct: 191 FISSDMTDKISEQIKKNIISNIPAGRMGTPEEVANLACFLS-SDKSGYINGRVFVIDGGL 249

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  230 bits (588), Expect = 2e-76
 Identities = 74/258 (28%), Positives = 122/258 (47%), Gaps = 17/258 (6%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGG---QALTFGGD 84
           VA++TG+S GIGRA A    + G KV +   R ++  EE  ++I A+G       +   D
Sbjct: 7   VAIITGSSNGIGRATAVLFAREGAKVTITG-RHAERLEETRQQILAAGVSEQNVNSVVAD 65

Query: 85  VSKEADVESMIKTAVDAWGTVDILINNAGI----TRDTLLMRMKKSQWQDVIDLNLTGVF 140
           V+ +A  + ++ T +  +G +DIL+NNAG     ++           +   ++LNL  V 
Sbjct: 66  VTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVI 125

Query: 141 LCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNIN 200
             T+ A   +   K   +   +   GL        YS AKA +   T+  A +     I 
Sbjct: 126 ALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIR 185

Query: 201 VNAIAPGFIASDMTAKLGEDLE---------KKILEKIPLGRYGQPEEVAGLVEFLALNP 251
           VN+I+PG +A+   + +G   E           + E +P G  GQP+++A ++ FLA   
Sbjct: 186 VNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAFLADRK 245

Query: 252 AAGYITGQVLTIDGGMVM 269
            + YI G  L +DGG  +
Sbjct: 246 TSSYIIGHQLVVDGGSSL 263

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  226 bits (578), Expect = 7e-75
 Identities = 79/244 (32%), Positives = 125/244 (51%), Gaps = 4/244 (1%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
             +VTG ++GIG A+       G  +    AR+  E  E   + +  G Q      D S 
Sbjct: 10  TVLVTGGTKGIGHAIVEEFAGFGAVIHTC-ARNEYELNECLSKWQKKGFQVTGSVCDASL 68

Query: 88  EADVESMIKTAVDAW-GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
             + E +++T    + G +DILINN G  R    +      +   I  NL   +  +Q A
Sbjct: 69  RPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLA 128

Query: 147 AKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
             ++     G II ++S+ G+V     + YSA K  +  L + +A E+AS  I  NA+AP
Sbjct: 129 HPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIRANAVAP 188

Query: 207 GFIASDMTAKL-GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDG 265
             IA+ +   +  ++ +K ++ + PLGR+G+PEEV+ LV FL   PAA YITGQ + +DG
Sbjct: 189 AVIATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAFLC-MPAASYITGQTICVDG 247

Query: 266 GMVM 269
           G+ +
Sbjct: 248 GLTV 251

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  224 bits (571), Expect = 1e-73
 Identities = 71/258 (27%), Positives = 115/258 (44%), Gaps = 17/258 (6%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASG---GQALTFGGD 84
             ++TG+S GIGR  A    + G  V +   RSS+  EE  + I  SG    Q  +   D
Sbjct: 7   TVIITGSSNGIGRTTAILFAQEGANVTITG-RSSERLEETRQIILKSGVSEKQVNSVVAD 65

Query: 85  VSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQ----WQDVIDLNLTGVF 140
           V+ E   + +I + +  +G +D+L+NNAG             Q    +   + LNL  V 
Sbjct: 66  VTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVI 125

Query: 141 LCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNIN 200
             T+     ++  K   +   + V G         Y+ AKA +   T++ A + A   I 
Sbjct: 126 EMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAKFGIR 185

Query: 201 VNAIAPGFIASDMTAKLG---------EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNP 251
           VN+++PG + +  T  +G          +      E IP+G  G+PE +A ++ FLA   
Sbjct: 186 VNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILFLADRN 245

Query: 252 AAGYITGQVLTIDGGMVM 269
            + YI GQ +  DGG  +
Sbjct: 246 LSFYILGQSIVADGGTSL 263

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score =  221 bits (565), Expect = 6e-73
 Identities = 73/248 (29%), Positives = 127/248 (51%), Gaps = 8/248 (3%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
            A+VTG SRGIG  +   L   G  V     R+ KE  +   +  + G +      D+S 
Sbjct: 10  TALVTGGSRGIGYGIVEELASLGASVYTCS-RNQKELNDCLTQWRSKGFKVEASVCDLSS 68

Query: 88  EADVESMIKTAVDAW-GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
            ++ + ++ T  + + G ++IL+NNAGI             +  ++ +N    +  +  A
Sbjct: 69  RSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLA 128

Query: 147 AKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
              +   ++G ++ I+SV G +    +A Y A K  +  LT+ +A E+A  NI VN + P
Sbjct: 129 HPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGP 188

Query: 207 GFIASDMTAKLGEDLE-----KKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL 261
           G IA+ +     +D E      K++++  L R G+P+E+A +V FL   PAA Y+TGQ++
Sbjct: 189 GVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLC-FPAASYVTGQII 247

Query: 262 TIDGGMVM 269
            +DGG++ 
Sbjct: 248 YVDGGLMA 255

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  221 bits (565), Expect = 7e-73
 Identities = 78/247 (31%), Positives = 123/247 (49%), Gaps = 10/247 (4%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASG--GQALTFGGDV 85
           +A+VTGAS GIG AVA +L + G KV+   AR+    EE+  E +++G  G  + +  D+
Sbjct: 12  LALVTGASGGIGAAVARALVQQGLKVVGC-ARTVGNIEELAAECKSAGYPGTLIPYRCDL 70

Query: 86  SKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQA 145
           S E D+ SM          VDI INNAG+ R   L+    S W+D+ ++N+  + +CT+ 
Sbjct: 71  SNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTRE 130

Query: 146 AAKIMMKKK--KGRIINIASVVGL--VGNIGQANYSAAKAGVIGLTKTVAKE--YASRNI 199
           A + M ++    G IINI S+ G   +       YSA K  V  LT+ + +E   A  +I
Sbjct: 131 AYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELREAQTHI 190

Query: 200 NVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQ 259
               I+PG + +    KL +   +K        +  +PE+VA  V ++  +  A    G 
Sbjct: 191 RATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCLKPEDVAEAVIYVL-STPAHIQIGD 249

Query: 260 VLTIDGG 266
           +     G
Sbjct: 250 IQMRPTG 256

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score =  221 bits (563), Expect = 1e-72
 Identities = 75/244 (30%), Positives = 126/244 (51%), Gaps = 7/244 (2%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA++TG + GIG A+AT   + G KV++   R S   E+  K +  +  Q   F  D S 
Sbjct: 8   VAIITGGTLGIGLAIATKFVEEGAKVMITG-RHSDVGEKAAKSV-GTPDQIQFFQHDSSD 65

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
           E     +      A+G V  L+NNAGI  +  +     ++W+ ++ +NL GVF  T+   
Sbjct: 66  EDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGI 125

Query: 148 KIMMKKKKG-RIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASR--NINVNAI 204
           + M  K  G  IIN++S+ G VG+     Y+A+K  V  ++K+ A + A +  ++ VN +
Sbjct: 126 QRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTV 185

Query: 205 APGFIASDMTAKL-GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTI 263
            PG+I + +   L G +       K P+G  G+P ++A +  +LA +  + + TG    +
Sbjct: 186 HPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLA-SNESKFATGSEFVV 244

Query: 264 DGGM 267
           DGG 
Sbjct: 245 DGGY 248

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score =  220 bits (561), Expect = 3e-72
 Identities = 78/250 (31%), Positives = 123/250 (49%), Gaps = 9/250 (3%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
             +VTG +RGIG A   ++  AG  V V Y  ++   E   K  +  G +   +  DVS 
Sbjct: 11  TIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSN 70

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
              V   I+      G +  LI NAG++       +    +  V D+N+ GVF   +A A
Sbjct: 71  TDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVA 130

Query: 148 KIMMKKKKGRIINIAS--------VVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNI 199
           K+ ++K++   I + S           L G++ Q  Y+++KA    L K +A E+AS  I
Sbjct: 131 KLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGI 190

Query: 200 NVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQ 259
            VNA++PG++ +D TA + + +       IPL R+ QPEE+ G    L  +  A Y+TG 
Sbjct: 191 RVNALSPGYVNTDQTAHMDKKIRDHQASNIPLNRFAQPEEMTGQAILLL-SDHATYMTGG 249

Query: 260 VLTIDGGMVM 269
              IDGG ++
Sbjct: 250 EYFIDGGQLI 259

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  219 bits (559), Expect = 4e-72
 Identities = 72/249 (28%), Positives = 122/249 (48%), Gaps = 15/249 (6%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           V VVTG  RGIG  +  +   +G +V++         E   + +E     A+    DV++
Sbjct: 8   VVVVTGGGRGIGAGIVRAFVNSGARVVICDKD-----ESGGRALEQELPGAVFILCDVTQ 62

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDT-LLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
           E DV++++   +  +G +D ++NNAG               ++ +++LNL G +  T+ A
Sbjct: 63  EDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLA 122

Query: 147 AKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
               ++K +G +INI+S+VG +G      Y A K  V  +TK +A + +   + VN I+P
Sbjct: 123 LP-YLRKSQGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISP 181

Query: 207 GFIASDMTAKLGEDLE------KKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQV 260
           G I + +  +L   +       ++ +   PLGR GQP EV     FLA    A + TG  
Sbjct: 182 GNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLA--SEANFCTGIE 239

Query: 261 LTIDGGMVM 269
           L + GG  +
Sbjct: 240 LLVTGGAEL 248

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score =  218 bits (556), Expect = 1e-71
 Identities = 80/241 (33%), Positives = 127/241 (52%), Gaps = 6/241 (2%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
             ++TG +RG+G   A     AG +V++      +E     +E+   G  A     DV+ 
Sbjct: 7   TVIITGGARGLGAEAARQAVAAGARVVLAD-VLDEEGAATAREL---GDAARYQHLDVTI 62

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
           E D + ++  A + +G+VD L+NNAGI+    L      +++ V+++NLTGVF+  +   
Sbjct: 63  EEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVI 122

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
             M     G I+NI+S  GL+G    ++Y A+K GV GL+K  A E  +  I VN++ PG
Sbjct: 123 PAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPG 182

Query: 208 FIASDMTAKLGEDLEKKILEKIPLGRYG-QPEEVAGLVEFLALNPAAGYITGQVLTIDGG 266
              + MTA+ G    +      P+GR G +P E+AG V  L  +  + Y+TG  L +DGG
Sbjct: 183 MTYTPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLL-SDTSSYVTGAELAVDGG 241

Query: 267 M 267
            
Sbjct: 242 W 242

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  216 bits (551), Expect = 2e-70
 Identities = 71/256 (27%), Positives = 117/256 (45%), Gaps = 15/256 (5%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQA---LTFGGD 84
             ++TG+S GIGR+ A    K G +V +   R+    EE  ++I  +G  A        D
Sbjct: 6   SVIITGSSNGIGRSAAVIFAKEGAQVTITG-RNEDRLEETKQQILKAGVPAEKINAVVAD 64

Query: 85  VSKEADVESMIKTAVDAWGTVDILINNA--GITRDTLLMRMKKSQWQDVIDLNLTGVFLC 142
           V++ +  + +I T +  +G +DIL+NNA   +   T         +Q    LN   V   
Sbjct: 65  VTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEM 124

Query: 143 TQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
           TQ   + ++K K   +   + V G   + G   Y+ AKA +   T+  A +     + VN
Sbjct: 125 TQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVN 184

Query: 203 AIAPGFIASDMTAKLG---------EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAA 253
           +++PG +A+     +G                 E IP+G  G+PEE+A ++ FLA    +
Sbjct: 185 SVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLADRNLS 244

Query: 254 GYITGQVLTIDGGMVM 269
            YI GQ +  DGG  +
Sbjct: 245 SYIIGQSIVADGGSTL 260

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score =  212 bits (540), Expect = 3e-69
 Identities = 120/242 (49%), Positives = 162/242 (66%), Gaps = 5/242 (2%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           +A+VTGASRGIGRA+A +L   G KV +  A S   A+ +   +   G        +V+ 
Sbjct: 6   IALVTGASRGIGRAIAETLAARGAKV-IGTATSENGAQAISDYL---GANGKGLMLNVTD 61

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
            A +ES+++     +G VDIL+NNAGITRD LLMRMK  +W D+I+ NL+ VF  ++A  
Sbjct: 62  PASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVM 121

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
           + MMKK+ GRII I SVVG +GN GQANY+AAKAG+IG +K++A+E ASR I VN +APG
Sbjct: 122 RAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPG 181

Query: 208 FIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM 267
           FI +DMT  L +D    IL ++P GR G  +E+A  V FLA +  A YITG+ L ++GGM
Sbjct: 182 FIETDMTRALSDDQRAGILAQVPAGRLGGAQEIANAVAFLA-SDEAAYITGETLHVNGGM 240

Query: 268 VM 269
            M
Sbjct: 241 YM 242

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  213 bits (544), Expect = 4e-69
 Identities = 87/249 (34%), Positives = 125/249 (50%), Gaps = 23/249 (9%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNY--------ARSSKEAEEVCKEIEASGGQAL 79
           V +VTGA  G+GRA A +  + G  V+VN          + S  A++V +EI   GG+A+
Sbjct: 9   VVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAV 68

Query: 80  TFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGV 139
                V      E ++KTA+D +G +D+++NNAGI RD    R+    W  +  ++L G 
Sbjct: 69  ANYDSV---EAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGS 125

Query: 140 FLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNI 199
           F  T+AA   M K+  GRII  AS  G+ GN GQANYSAAK G++GL  T+  E    NI
Sbjct: 126 FQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVIEGRKNNI 185

Query: 200 NVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQ 259
           + N IAP   +      + E           L    +PE VA LV +L     +    G 
Sbjct: 186 HCNTIAPNAGSRMTETVMPE----------DLVEALKPEYVAPLVLWLC--HESCEENGG 233

Query: 260 VLTIDGGMV 268
           +  +  G +
Sbjct: 234 LFEVGAGWI 242

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score =  212 bits (540), Expect = 4e-69
 Identities = 82/243 (33%), Positives = 133/243 (54%), Gaps = 4/243 (1%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
            A++TGA  GIG+ +A +   AG  V+V+   ++  A  V  EI+  GGQA     D++ 
Sbjct: 13  CAIITGAGAGIGKEIAITFATAGASVVVSD-INADAANHVVDEIQQLGGQAFACRCDITS 71

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
           E ++ ++   A+   G VDIL+NNAG         M  + ++   +LN+   F  +Q  A
Sbjct: 72  EQELSALADFAISKLGKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVA 130

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
             M K   G I+ I S+     NI   +Y+++KA    L + +A +   +NI VN IAPG
Sbjct: 131 PEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPG 190

Query: 208 FIASDMTAK-LGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGG 266
            I +D     +  ++E+K+L+  P+ R GQP+++A    FL  +PAA +++GQ+LT+ GG
Sbjct: 191 AILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLC-SPAASWVSGQILTVSGG 249

Query: 267 MVM 269
            V 
Sbjct: 250 GVQ 252

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  213 bits (543), Expect = 5e-69
 Identities = 80/251 (31%), Positives = 130/251 (51%), Gaps = 12/251 (4%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS-----GGQALTFG 82
           VA+VTG + GIG+A+   L + G  V++   R  +  +    E++A+       + +   
Sbjct: 14  VAIVTGGATGIGKAIVKELLELGSNVVIAS-RKLERLKSAADELQANLPPTKQARVIPIQ 72

Query: 83  GDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLC 142
            ++  E +V +++K+ +D +G ++ L+NN G    +    +    W  V++ NLTG F  
Sbjct: 73  CNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYM 132

Query: 143 TQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
            +A     MK+  G I+NI       G     +  AA+AGV  LTK++A E+A   I +N
Sbjct: 133 CKAVYSSWMKEHGGSIVNIIVPTK-AGFPLAVHSGAARAGVYNLTKSLALEWACSGIRIN 191

Query: 203 AIAPGFIASDMT----AKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITG 258
            +APG I S          G+   +   +KIP  R G PEEV+ +V FL  +PAA +ITG
Sbjct: 192 CVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLL-SPAASFITG 250

Query: 259 QVLTIDGGMVM 269
           Q + +DGG  +
Sbjct: 251 QSVDVDGGRSL 261

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  212 bits (540), Expect = 6e-69
 Identities = 86/256 (33%), Positives = 134/256 (52%), Gaps = 17/256 (6%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA+VTGA RGIGR +A  LG+ GCKV+VNYA S++ AEEV   I+ +G  A     +V  
Sbjct: 20  VALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGV 79

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
             D+  M + AV  +G +DI+ +N+G+     +  +   ++  V  +N  G F   + A 
Sbjct: 80  VEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAY 139

Query: 148 KIMMKKKKGRIINIASVVGLVGNIG-QANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
           K +     GR+I + S+ G    +   A YS +K  +    + +A + A + I VN +AP
Sbjct: 140 KHLE--IGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAP 197

Query: 207 GFIASDMTAKLGEDL-------------EKKILEKIPLGRYGQPEEVAGLVEFLALNPAA 253
           G I +DM   +  +              E   ++  PL R G P ++A +V FLA +   
Sbjct: 198 GGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCFLA-SNDG 256

Query: 254 GYITGQVLTIDGGMVM 269
           G++TG+V+ IDGG  M
Sbjct: 257 GWVTGKVIGIDGGACM 272

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  211 bits (539), Expect = 6e-69
 Identities = 71/248 (28%), Positives = 115/248 (46%), Gaps = 13/248 (5%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA+VTG + G+G  V   L   G KV  +   +    +++  E+   G +++    DVS 
Sbjct: 8   VALVTGGASGVGLEVVKLLLGEGAKVAFSD-INEAAGQQLAAEL---GERSMFVRHDVSS 63

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
           EAD   ++       GT+++L+NNAGI     +   +   +  ++ +N   VF+  Q   
Sbjct: 64  EADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGI 123

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASR--NINVNAIA 205
              MK+  G IIN+ASV   +     A YSA+KA V  LT+  A     +   I VN+I 
Sbjct: 124 A-AMKETGGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIH 182

Query: 206 PGFIASDMTAKL-----GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQV 260
           P  I + M          +++     +    GR   PE +A LV FLA +  +  ++G  
Sbjct: 183 PDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLA-SDESSVMSGSE 241

Query: 261 LTIDGGMV 268
           L  D  ++
Sbjct: 242 LHADNSIL 249

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  208 bits (531), Expect = 6e-68
 Identities = 95/242 (39%), Positives = 137/242 (56%), Gaps = 8/242 (3%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
             ++TGA+ GIGRA      K G +++           E  + + A          DV+ 
Sbjct: 7   AVLITGAAHGIGRATLELFAKEGARLVACD-IEEGPLREAAEAVGAHPVVM-----DVAD 60

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
            A VE     A+   G +D +++ AGITRD    +M    W+ V+ +NLTG FL  +AA+
Sbjct: 61  PASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAAS 120

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
           + M +K  G I+  AS V  +GN+GQANY+A+ AGV+GLT+T+A E     I VN +APG
Sbjct: 121 EAMREKNPGSIVLTASRVY-LGNLGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPG 179

Query: 208 FIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM 267
           FI + MTAK+ E + +K +   PLGR G+P EVA    FL  +  + +ITGQVL +DGG 
Sbjct: 180 FIETRMTAKVPEKVREKAIAATPLGRAGKPLEVAYAALFLL-SDESSFITGQVLFVDGGR 238

Query: 268 VM 269
            +
Sbjct: 239 TI 240

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  207 bits (529), Expect = 1e-67
 Identities = 68/244 (27%), Positives = 116/244 (47%), Gaps = 13/244 (5%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
            A+VTGA +GIGR    +L  +G KV+    R++ +   + KE             D+  
Sbjct: 7   RALVTGAGKGIGRDTVKALHASGAKVVAVT-RTNSDLVSLAKEC----PGIEPVCVDLGD 61

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
               E     A+   G VD+L+NNA +      + + K  +     +NL  VF  +Q  A
Sbjct: 62  WDATEK----ALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVA 117

Query: 148 KIMMKKKK-GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
           + M+ +   G I+N++S+V  V       YS+ K  +  LTK +A E     I VN++ P
Sbjct: 118 RDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNP 177

Query: 207 GFIASDMTAKLGEDLE--KKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTID 264
             + +DM  K+  D E  +K+ E+ PL ++ + E+V   + FL  +  +   +G  + +D
Sbjct: 178 TVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLL-SDRSASTSGGGILVD 236

Query: 265 GGMV 268
            G +
Sbjct: 237 AGYL 240

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score =  207 bits (528), Expect = 2e-67
 Identities = 87/243 (35%), Positives = 137/243 (56%), Gaps = 4/243 (1%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA+VTG SRG+G  +A  L +AGC V+V      + +E   K  E  G + + F  DVS 
Sbjct: 7   VALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSN 66

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
             +V+ +++   + +G +D ++N AGI R          +++ VI++NL G +   + A 
Sbjct: 67  YEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAF 126

Query: 148 KIMMKKKKGRIINIASVVGLVGNIG-QANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
            ++ +     IINI S+      +   + Y+A+K GV  LTK +AKE+    I VN IAP
Sbjct: 127 SLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAP 186

Query: 207 GFIASDMTAKLGEDLEK--KILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTID 264
           G+  + MT  +  D EK   +L++IPLGR G PE++ G+  FLA +  A Y+TGQ++ +D
Sbjct: 187 GWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLA-SEEAKYVTGQIIFVD 245

Query: 265 GGM 267
           GG 
Sbjct: 246 GGW 248

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score =  206 bits (525), Expect = 7e-67
 Identities = 94/245 (38%), Positives = 147/245 (60%), Gaps = 4/245 (1%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           V V+TG+S G+G+++A        KV+VNY     EA  V +EI+  GG+A+   GDV+ 
Sbjct: 9   VVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTV 68

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
           E+DV +++++A+  +G +D++INNAG+        M  S W  VID NLTG FL ++ A 
Sbjct: 69  ESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAI 128

Query: 148 K-IMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
           K  +    KG +IN++SV   +      +Y+A+K G+  +T+T+A EYA + I VN I P
Sbjct: 129 KYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGP 188

Query: 207 GFIASDMTAKLGEDLEKK--ILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTID 264
           G I + + A+   D E++  +   IP+G  G+PEE+A +  +LA +  A Y+TG  L  D
Sbjct: 189 GAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLA-SSEASYVTGITLFAD 247

Query: 265 GGMVM 269
           GGM +
Sbjct: 248 GGMTL 252

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  206 bits (524), Expect = 1e-66
 Identities = 76/254 (29%), Positives = 126/254 (49%), Gaps = 15/254 (5%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA+ TGA RGIGR +A  LG+ G  V+VNY  SSK AEEV  E++  G Q +    D+SK
Sbjct: 8   VALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISK 67

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
            ++V ++   AV  +G +D +++N+G+      + + +  +  V +LN  G F   Q   
Sbjct: 68  PSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGL 127

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
           K   ++    I+  +    + G    A Y+ +KA V G  +  A +  ++ + VN IAPG
Sbjct: 128 K-HCRRGGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPG 186

Query: 208 FIASDMTAKLG-------------EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAG 254
            + +DM  +               E +++ +    PL R G P ++   V  L     + 
Sbjct: 187 GVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSALC-QEESE 245

Query: 255 YITGQVLTIDGGMV 268
           +I GQV+ + GG +
Sbjct: 246 WINGQVIKLTGGGI 259

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score =  203 bits (518), Expect = 1e-65
 Identities = 69/257 (26%), Positives = 103/257 (40%), Gaps = 21/257 (8%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
             ++TG + G+GRA+       G KV V        AE + +     G   L   GDV  
Sbjct: 7   AVLITGGASGLGRALVDRFVAEGAKVAVLDKS----AERLAELETDHGDNVLGIVGDVRS 62

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITR-----DTLLMRMKKSQWQDVIDLNLTGVFLC 142
             D +      V  +G +D LI NAGI         L      + + +V  +N+ G    
Sbjct: 63  LEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHA 122

Query: 143 TQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVN 202
            +A     +   +G +I   S  G   N G   Y+AAK  ++GL + +A E A   + VN
Sbjct: 123 VKACLP-ALVASRGNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELAFELA-PYVRVN 180

Query: 203 AIAPGFIASDMTAKLG----------EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPA 252
            +  G I SD+                 L   +   +P+GR  + EE  G   F A    
Sbjct: 181 GVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEYTGAYVFFATRGD 240

Query: 253 AGYITGQVLTIDGGMVM 269
           A   TG +L  DGG+ +
Sbjct: 241 AAPATGALLNYDGGLGV 257

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  201 bits (512), Expect = 4e-65
 Identities = 62/243 (25%), Positives = 108/243 (44%), Gaps = 13/243 (5%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
             +VTGA +GIGR    +L   G +V+    R+  + + + +E             D+  
Sbjct: 9   RVLVTGAGKGIGRGTVQALHATGARVVAVS-RTQADLDSLVREC----PGIEPVCVDLGD 63

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
               E     A+ + G VD+L+NNA +      + + K  +    ++NL  V   +Q  A
Sbjct: 64  WEATER----ALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVA 119

Query: 148 KIMMKKKKG-RIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
           + ++ +     I+N++S          + Y + K  +  LTK +A E     I VNA+ P
Sbjct: 120 RGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNP 179

Query: 207 GFIASDMTAKLGED--LEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTID 264
             + + M      D    K +L +IPLG++ + E V   + FL  +  +G  TG  L ++
Sbjct: 180 TVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLL-SDRSGMTTGSTLPVE 238

Query: 265 GGM 267
           GG 
Sbjct: 239 GGF 241

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score =  201 bits (513), Expect = 4e-65
 Identities = 63/250 (25%), Positives = 103/250 (41%), Gaps = 17/250 (6%)

Query: 29  AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKE 88
           A+VT      G   A  L +AG  V  +   S K+ +E+    E               E
Sbjct: 3   AIVTNVKHFGGMGSALRLSEAGHTVACHD-ESFKQKDELEAFAET------YPQLKPMSE 55

Query: 89  ADVESMIKTAVDAWGTVDILINNAGITRDT-LLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
            +   +I+    A+G VD+L++N     +   + +     ++  ++      F    A A
Sbjct: 56  QEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVA 115

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
             M K+K G II I S          + Y++A+AG   L   ++KE    NI V AI P 
Sbjct: 116 SQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGPN 175

Query: 208 FIASDMTAKL--------GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQ 259
           ++ S+ +             +    + +   L R G  +E+  LV FLA + +  Y+TGQ
Sbjct: 176 YLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLA-SGSCDYLTGQ 234

Query: 260 VLTIDGGMVM 269
           V  + GG  M
Sbjct: 235 VFWLAGGFPM 244

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score =  201 bits (512), Expect = 7e-65
 Identities = 72/247 (29%), Positives = 124/247 (50%), Gaps = 9/247 (3%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
            A+VTG S+GIG A+   L   G +V     R+ KE +E  +     G        D+  
Sbjct: 8   TALVTGGSKGIGYAIVEELAGLGARVYTCS-RNEKELDECLEIWREKGLNVEGSVCDLLS 66

Query: 88  EADVESMIKTAVDAW-GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
             + + +++T    + G ++IL+NNAG+          +  +  ++  N    +  +Q A
Sbjct: 67  RTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIA 126

Query: 147 AKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
             ++   + G +I ++S+ G       + YSA+K  +  +TK++A E+A  NI VN++AP
Sbjct: 127 YPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAP 186

Query: 207 GFIASDMTAK------LGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQV 260
           G I + +           ++     + K P+GR G+P+EV+ L+ FL   PAA YITGQ+
Sbjct: 187 GVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLC-FPAASYITGQI 245

Query: 261 LTIDGGM 267
           +  DGG 
Sbjct: 246 IWADGGF 252

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score =  200 bits (510), Expect = 1e-64
 Identities = 95/253 (37%), Positives = 138/253 (54%), Gaps = 15/253 (5%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA+VTGA+ GIG  +A  LGK G +V V   R  +      KE+  +G +A     DV  
Sbjct: 4   VALVTGATSGIGLEIARRLGKEGLRVFVCA-RGEEGLRTTLKELREAGVEADGRTCDVRS 62

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
             ++E+++   V+ +G VD+L+NNAG         +    W DV++ NLTGVF  T+   
Sbjct: 63  VPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVL 122

Query: 148 KI--MMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIA 205
           K   M+++  GRI+NIAS  G  G +  A YSA+K GV+G TK +  E A   I VNA+ 
Sbjct: 123 KAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVC 182

Query: 206 PGFIASDMTAKLG-----------EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAG 254
           PGF+ + M A +            E+   +I  ++P+GRY QP EVA +V +L   P A 
Sbjct: 183 PGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLI-GPGAA 241

Query: 255 YITGQVLTIDGGM 267
            +T Q L + GG+
Sbjct: 242 AVTAQALNVCGGL 254

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  200 bits (509), Expect = 2e-64
 Identities = 65/257 (25%), Positives = 116/257 (45%), Gaps = 27/257 (10%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEI--EASGGQALTFGGDV 85
           VA+VTGA++GIGRA A +L   G KV +    + +   +    +  +    + L    DV
Sbjct: 5   VALVTGAAQGIGRAFAEALLLKGAKVALVD-WNLEAGVQCKAALHEQFEPQKTLFIQCDV 63

Query: 86  SKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQA 145
           + +  +    +  VD +G +DIL+NNAG+  +          W+  + +NL  V   T  
Sbjct: 64  ADQQQLRDTFRKVVDHFGRLDILVNNAGVNNEK--------NWEKTLQINLVSVISGTYL 115

Query: 146 AAKIMMKKKK---GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTV--AKEYASRNIN 200
               M K+     G IIN++S+ GL+    Q  Y A+K G++G T++   A    +  + 
Sbjct: 116 GLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNSGVR 175

Query: 201 VNAIAPGFIASDMTAKLGED--------LEKKILEKIPLGRYGQPEEVAGLVEFLALNPA 252
           +NAI PGF+ + +   + ++         +  I + I       P  +A  +  L  + A
Sbjct: 176 LNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLIEDDA 235

Query: 253 AGYITGQVLTIDGGMVM 269
              + G ++ I     +
Sbjct: 236 ---LNGAIMKITTSKGI 249

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  198 bits (504), Expect = 7e-64
 Identities = 86/241 (35%), Positives = 133/241 (55%), Gaps = 10/241 (4%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA+V+G +RG+G +   ++   G KV+       +E + +  E+      A     DV++
Sbjct: 8   VALVSGGARGMGASHVRAMVAEGAKVVFGD-ILDEEGKAMAAEL---ADAARYVHLDVTQ 63

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
            A  ++ + TAV A+G + +L+NNAGI     +     ++WQ ++D+NLTGVFL  +A  
Sbjct: 64  PAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVV 123

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
           K M +  +G IINI+S+ GL G +    Y+A K  V GLTK+ A E     I VN+I PG
Sbjct: 124 KPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPG 183

Query: 208 FIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM 267
            + + MT  + ED     + +  LGR  +P EV+ LV +LA +  + Y TG    +DGG 
Sbjct: 184 LVKTPMTDWVPED-----IFQTALGRAAEPVEVSNLVVYLA-SDESSYSTGAEFVVDGGT 237

Query: 268 V 268
           V
Sbjct: 238 V 238

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score =  198 bits (504), Expect = 1e-63
 Identities = 70/248 (28%), Positives = 118/248 (47%), Gaps = 11/248 (4%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA++TG + GIG   A    + G KV++    +    ++VC  I +          DV+K
Sbjct: 8   VAIITGGAGGIGETTAKLFVRYGAKVVIAD-IADDHGQKVCNNIGSPDV-ISFVHCDVTK 65

Query: 88  EADVESMIKTAVDAWGTVDILINNA--GITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQA 145
           + DV +++ T +   G +DI+  N     T    ++      ++ V+D+N+ G FL  + 
Sbjct: 66  DEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKH 125

Query: 146 AAKIMMKKKKGRIINIASVVGLVGNIGQ-ANYSAAKAGVIGLTKTVAKEYASRNINVNAI 204
           AA++M+  KKG I+  AS+       G    Y+A K  V+GLT ++  E     I VN +
Sbjct: 126 AARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCV 185

Query: 205 APGFIASDMTAKLGEDLEKKILE-----KIPLGRYGQPEEVAGLVEFLALNPAAGYITGQ 259
           +P  +AS +   +      ++ E         G   + E+VA  V +LA    + Y++G 
Sbjct: 186 SPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLA-GDESKYVSGL 244

Query: 260 VLTIDGGM 267
            L IDGG 
Sbjct: 245 NLVIDGGY 252

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score =  199 bits (506), Expect = 1e-63
 Identities = 64/247 (25%), Positives = 115/247 (46%), Gaps = 7/247 (2%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEA-SGGQALTFGGDVS 86
           VA +TG   G+G+ + T L   G + ++   R     +   ++I + +G +      DV 
Sbjct: 27  VAFITGGGTGLGKGMTTLLSSLGAQCVIAS-RKMDVLKATAEQISSQTGNKVHAIQCDVR 85

Query: 87  KEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
               V++ +   +   G  +I+INNA     +   R+  + W+ + D+ L G    T   
Sbjct: 86  DPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEI 145

Query: 147 AKIMMKKK-KGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIA 205
            K ++K +     ++I ++    G+      ++AKAGV  ++K++A E+    +  N I 
Sbjct: 146 GKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQ 205

Query: 206 PGFIASDMTAKLG---EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLT 262
           PG I +             EK+++ +IP GR G  EE+A L  FL  +  A +I G V+ 
Sbjct: 206 PGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLC-SDYASWINGAVIK 264

Query: 263 IDGGMVM 269
            DGG  +
Sbjct: 265 FDGGEEV 271

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score =  197 bits (502), Expect = 1e-63
 Identities = 77/242 (31%), Positives = 123/242 (50%), Gaps = 8/242 (3%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
             +VTGA+ GIGRA      + G  ++    R  +   E    +     +A+    DVS 
Sbjct: 7   TILVTGAASGIGRAALDLFAREGASLVAVD-REERLLAEAVAAL---EAEAIAVVADVSD 62

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
              VE++   A++ +G +  + + AG+    L   +    W+ V+ +NLTG FL  + A 
Sbjct: 63  PKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAG 122

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
           +++ +     +      V  +G  G A+Y+A K GV+GL +T+A E A + + VN + PG
Sbjct: 123 EVLEEGGSLVLT---GSVAGLGAFGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPG 179

Query: 208 FIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM 267
            I + MTA L     ++ +   PLGR G+PEEVA    FL  +  + YITGQ L +DGG 
Sbjct: 180 LIQTPMTAGLPPWAWEQEVGASPLGRAGRPEEVAQAALFLL-SEESAYITGQALYVDGGR 238

Query: 268 VM 269
            +
Sbjct: 239 SI 240

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score =  196 bits (499), Expect = 6e-63
 Identities = 61/246 (24%), Positives = 89/246 (36%), Gaps = 16/246 (6%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVS- 86
             +   A  GIG   +  L K   K  V   R          +             DV+ 
Sbjct: 7   NVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTV 66

Query: 87  KEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
             A+ + ++K   D   TVDILIN AGI  D         Q +  I +N TG+   T A 
Sbjct: 67  PVAESKKLLKKIFDQLKTVDILINGAGILDD--------HQIERTIAINFTGLVNTTTAI 118

Query: 147 AKIMMKK---KKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNA 203
                K+     G I NI SV G         YSA+KA V+  T ++AK      +   +
Sbjct: 119 LDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYS 178

Query: 204 IAPGFIASDMTAKLGEDLE-KKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLT 262
           I PG   + +       L+ +  + ++ L    Q  E  G     A         G +  
Sbjct: 179 INPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKA---IEANKNGAIWK 235

Query: 263 IDGGMV 268
           +D G +
Sbjct: 236 LDLGTL 241

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score =  196 bits (498), Expect = 7e-63
 Identities = 86/251 (34%), Positives = 126/251 (50%), Gaps = 13/251 (5%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEI--EASGGQALTFGGDV 85
           V ++TG   G+GRA A  L   G K+ +    SS+  E     +   A   + LT   DV
Sbjct: 6   VVLITGGGSGLGRATAVRLAAEGAKLSLVD-VSSEGLEASKAAVLETAPDAEVLTTVADV 64

Query: 86  SKEADVESMIKTAVDAWGTVDILINNAGITR-DTLLMRMKKSQWQDVIDLNLTGVFLCTQ 144
           S EA VE+ +    + +G +D   NNAGI            +++  V+ +NL GVFL  +
Sbjct: 65  SDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLE 124

Query: 145 AAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAI 204
              KIM ++  G ++N ASV G+ G   Q+ Y+AAK GV+GLT+  A EY    I +NAI
Sbjct: 125 KVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAI 184

Query: 205 APGFIASDMTAKL--------GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYI 256
           APG I + M                 ++ ++  P  RYG+  E+A +V FL  +  A Y+
Sbjct: 185 APGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLL-SDDASYV 243

Query: 257 TGQVLTIDGGM 267
              V+ IDGG 
Sbjct: 244 NATVVPIDGGQ 254

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score =  193 bits (491), Expect = 9e-62
 Identities = 97/253 (38%), Positives = 138/253 (54%), Gaps = 14/253 (5%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGG-QALTFGGDVS 86
           VAVVTG++ GIG  +AT+L   G  +++N    + E E+V   + A  G + L  G D+S
Sbjct: 6   VAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLS 65

Query: 87  KEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
           K   V  ++  AV   G +DIL+NNAGI    L+      +W  ++ LNL+ VF  T AA
Sbjct: 66  KGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAA 125

Query: 147 AKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
              M K+  GRIINIAS  GLV +  ++ Y AAK GV+G TK  A E A + I  NAI P
Sbjct: 126 LPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICP 185

Query: 207 GFIASDMTAKLGEDLEKK------------ILEKIPLGRYGQPEEVAGLVEFLALNPAAG 254
           G++ + +  K    L +K            + EK P  ++  PE++ G   FLA + AA 
Sbjct: 186 GWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLA-SDAAA 244

Query: 255 YITGQVLTIDGGM 267
            ITG  +++DGG 
Sbjct: 245 QITGTTVSVDGGW 257

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  192 bits (488), Expect = 1e-61
 Identities = 97/242 (40%), Positives = 140/242 (57%), Gaps = 13/242 (5%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
             +VTG +RGIG A+A  L   G KV V +  S                       DV+ 
Sbjct: 9   SVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG------------LFGVEVDVTD 56

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
              V+       +  G V++L++NAG++ D  LMRM + +++ VI+ NLTG F   Q A+
Sbjct: 57  SDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRAS 116

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
           + M + K GR+I I SV GL G   QANY+A+KAGVIG+ +++A+E +  N+  N +APG
Sbjct: 117 RSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPG 176

Query: 208 FIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM 267
           +I +DMT  L E +++  L+ IP  R G P EVAG+V FLA +  A YI+G V+ +DGGM
Sbjct: 177 YIDTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLA-SEDASYISGAVIPVDGGM 235

Query: 268 VM 269
            M
Sbjct: 236 GM 237

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score =  192 bits (488), Expect = 3e-61
 Identities = 73/256 (28%), Positives = 123/256 (48%), Gaps = 19/256 (7%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           V +VTGA   IG A A  L + G  + +    + +  E+    +   G +A ++  DV+ 
Sbjct: 7   VCLVTGAGGNIGLATALRLAEEGTAIALLD-MNREALEKAEASVREKGVEARSYVCDVTS 65

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRD-TLLMRMKKSQWQDVIDLNLTGVFLCTQAA 146
           E  V   + + V  +G +D L NNAG       +       +  V+ +N+TG F   +A 
Sbjct: 66  EEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAV 125

Query: 147 AKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
           ++ M+ +  GRI+N AS+ G+ G    A Y  +K  +I LT+T A + A  NI VNAI+P
Sbjct: 126 SRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISP 185

Query: 207 GFIASDMTAKLG----------------EDLEKKILEKIPLGRYGQPEEVAGLVEFLALN 250
           G++      +                  + + ++++  +P+ RYG   E+ G+V FL   
Sbjct: 186 GYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVAFLL-G 244

Query: 251 PAAGYITGQVLTIDGG 266
             + ++TG  L I GG
Sbjct: 245 DDSSFMTGVNLPIAGG 260

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score =  188 bits (477), Expect = 1e-59
 Identities = 92/254 (36%), Positives = 134/254 (52%), Gaps = 14/254 (5%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA+VTGA +GIG+A+A  L K G  V +    +   A+ V  EI  +GG A+    DVS 
Sbjct: 3   VALVTGAGQGIGKAIALRLVKDGFAVAIAD-YNDATAKAVASEINQAGGHAVAVKVDVSD 61

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
              V + ++ A    G  D+++NNAG+   T +  +       V ++N+ GV    QAA 
Sbjct: 62  RDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAV 121

Query: 148 KIMMK-KKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
           +   K    G+IIN  S  G VGN   A YS++K  V GLT+T A++ A   I VN   P
Sbjct: 122 EAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCP 181

Query: 207 GFIASDMTAKLGEDL-----------EKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGY 255
           G + + M A++   +             +  ++I LGR  +PE+VA  V +LA +P + Y
Sbjct: 182 GIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLA-SPDSDY 240

Query: 256 ITGQVLTIDGGMVM 269
           +TGQ L IDGGMV 
Sbjct: 241 MTGQSLLIDGGMVF 254

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  187 bits (476), Expect = 1e-59
 Identities = 59/237 (24%), Positives = 95/237 (40%), Gaps = 15/237 (6%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           + ++TGA  GIGR  A    K   K+++    +    EE   + +  G +  TF  D S 
Sbjct: 9   IVLITGAGHGIGRLTAYEFAKLKSKLVLW-DINKHGLEETAAKCKGLGAKVHTFVVDCSN 67

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
             D+ S  K      G V IL+NNAG+   + L   +  Q +   ++N+   F  T+A  
Sbjct: 68  REDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFL 127

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYAS---RNINVNAI 204
             M K   G I+ +AS  G V       Y ++K   +G  KT+  E A+     +    +
Sbjct: 128 PAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCL 187

Query: 205 APGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAG-LVEFLALNPAAGYITGQV 260
            P F+ +                   LG   +PEEV   L+  +       +I   +
Sbjct: 188 CPNFVNTGFIKN----------PSTSLGPTLEPEEVVNRLMHGILTEQKMIFIPSSI 234

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score =  187 bits (475), Expect = 1e-59
 Identities = 64/240 (26%), Positives = 110/240 (45%), Gaps = 16/240 (6%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCK------VLVNYARSSKEAEEVCKEIEASGGQALTF 81
           + ++TGA +GIGRA+A    +A         VLV  +R++ + E++  E  A G    T 
Sbjct: 3   ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTI 62

Query: 82  GGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFL 141
             D+S  ADV  +    V+ +G +D L+NNAG+ R   L  + +  +   ++ NL G F 
Sbjct: 63  TADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFF 122

Query: 142 CTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINV 201
            TQA   +M ++  G I  I SV         + Y  +K G  GL +T+       N+ +
Sbjct: 123 LTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCNVRI 182

Query: 202 NAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL 261
             + PG + + M  K+ ++                PE++A  V    L P +  +  +++
Sbjct: 183 TDVQPGAVYTPMWGKVDDE---------MQALMMMPEDIAAPVVQAYLQP-SRTVVEEII 232

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score =  186 bits (472), Expect = 4e-59
 Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 26/252 (10%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
            A+VTG + G+GRA A +L   G +V+V               +   G   +   GDV++
Sbjct: 3   SALVTGGASGLGRAAALALKARGYRVVVLD-------------LRREGEDLIYVEGDVTR 49

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKK---SQWQDVIDLNLTGVFLCTQ 144
           E DV   +  A +      ++        + +L +        ++ V+++NL G F   +
Sbjct: 50  EEDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLR 109

Query: 145 AAAKI------MMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRN 198
            AA          + ++G I+N ASV    G IGQA Y+A+K GV+ LT   A+E A   
Sbjct: 110 LAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGWG 169

Query: 199 INVNAIAPGFIASDMTAKLGEDLEKKILEKIPL-GRYGQPEEVAGLVEFLALNPAAGYIT 257
           I V  +APG   + +   L E  +  +  ++P   R G+PEE A LV  +        + 
Sbjct: 170 IRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFPPRLGRPEEYAALVLHIL---ENPMLN 226

Query: 258 GQVLTIDGGMVM 269
           G+V+ +DG + M
Sbjct: 227 GEVVRLDGALRM 238

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  186 bits (472), Expect = 5e-59
 Identities = 65/249 (26%), Positives = 118/249 (47%), Gaps = 18/249 (7%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           V ++T A++GIG+A A +  + G KV+     +  + +E+ K                  
Sbjct: 8   VIILTAAAQGIGQAAALAFAREGAKVIATD-INESKLQELEKYPGIQT---------RVL 57

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
           +   +  I    +    +D+L N AG      ++  ++  W   ++LN+  ++L  +A  
Sbjct: 58  DVTKKKQIDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFL 117

Query: 148 KIMMKKKKGRIINIASVVG-LVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
             M+ +K G IIN++SV   + G + +  YS  KA VIGLTK+VA ++  + I  N + P
Sbjct: 118 PKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCP 177

Query: 207 GFIASDMTAKLGED------LEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQV 260
           G + +    +  +            L++   GR+   EE+A L  +LA +  + Y+TG  
Sbjct: 178 GTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLA-SDESAYVTGNP 236

Query: 261 LTIDGGMVM 269
           + IDGG  +
Sbjct: 237 VIIDGGWSL 245

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score =  185 bits (470), Expect = 1e-58
 Identities = 76/254 (29%), Positives = 125/254 (49%), Gaps = 17/254 (6%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
            A++TG++RGIGRA A +  + G +V +    + + A     EI   G  A     DV+ 
Sbjct: 7   TALITGSARGIGRAFAEAYVREGARVAIAD-INLEAARATAAEI---GPAACAIALDVTD 62

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
           +A ++  +   +D WG++DIL+NNA +     ++ + +  +  +  +N++G     QA A
Sbjct: 63  QASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVA 122

Query: 148 KIMMKKKKGRIIN-IASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAP 206
           + M+   +G  I  +AS  G  G      Y A KA VI LT++         INVNAIAP
Sbjct: 123 RAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAP 182

Query: 207 GFIASDMTAKLGE-----------DLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGY 255
           G +  +    +             + ++++   +P GR G+ E++ G+  FLA  P A Y
Sbjct: 183 GVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIFLA-TPEADY 241

Query: 256 ITGQVLTIDGGMVM 269
           I  Q   +DGG  M
Sbjct: 242 IVAQTYNVDGGNWM 255

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score =  184 bits (467), Expect = 2e-58
 Identities = 65/241 (26%), Positives = 111/241 (46%), Gaps = 18/241 (7%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
             +V  ASRGIGRAVA  L + G +V +   R+ +  +                      
Sbjct: 6   GVLVLAASRGIGRAVADVLSQEGAEVTICA-RNEELLKRSGHRYVV-------------- 50

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
             D+   +    +    VDIL+ NAG  +      +    +++ ID     +    +   
Sbjct: 51  -CDLRKDLDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYL 109

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
             M +K  GRI+ I S   +         ++A+  + G  KT++ E A   I VN +APG
Sbjct: 110 PAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPG 169

Query: 208 FIASDMTAK-LGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGG 266
           +  ++   + L E+ +K++  +IP+ R  +PEE+A +V FL  +  A Y+TGQ + +DGG
Sbjct: 170 WTETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFLC-SEKASYLTGQTIVVDGG 228

Query: 267 M 267
           +
Sbjct: 229 L 229

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score =  185 bits (469), Expect = 2e-58
 Identities = 74/265 (27%), Positives = 129/265 (48%), Gaps = 25/265 (9%)

Query: 27  PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS-GGQALTFGGDV 85
           P AV+TG +R IG ++A  L + G +V+V+Y  S   A+ +  E+ A+  G A+   GD+
Sbjct: 2   PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDL 61

Query: 86  SKEAD----VESMIKTAVDAWGTVDILINNAGITRDTLLM-----------RMKKSQWQD 130
           S  +      E +I  +  A+G  D+L+NNA     T L+           +   +Q  +
Sbjct: 62  SLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAE 121

Query: 131 VIDLNLTGVFLCTQAAAKIMMKKKK-----GRIINIASVVGLVGNIGQANYSAAKAGVIG 185
           +   N        +A A+   +          ++N+   +  +   G   Y+ AK  + G
Sbjct: 122 LFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGG 181

Query: 186 LTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGR-YGQPEEVAGLV 244
           LT+  A E A R+I VNA+APG     +   + ++ +++   K+PLG+      ++A  +
Sbjct: 182 LTRAAALELAPRHIRVNAVAPGLS--LLPPAMPQETQEEYRRKVPLGQSEASAAQIADAI 239

Query: 245 EFLALNPAAGYITGQVLTIDGGMVM 269
            FL  +  AGYITG  L +DGG+++
Sbjct: 240 AFLV-SKDAGYITGTTLKVDGGLIL 263

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  170 bits (432), Expect = 4e-53
 Identities = 63/246 (25%), Positives = 104/246 (42%), Gaps = 14/246 (5%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VAV+TG + G+G A A  L   G   ++     +   E   K++  +   A         
Sbjct: 7   VAVITGGASGLGLATAERLVGQGASAVLLD-LPNSGGEAQAKKLGNNCVFAPADVTSEKD 65

Query: 88  EADVESMIKTAV---DAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQ 144
                ++ K      D       +   +               +Q V+D+NL G F   +
Sbjct: 66  VQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIR 125

Query: 145 AAAKIMMKK------KKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRN 198
             A  M +       ++G IIN ASV    G +GQA YSA+K G++G+T  +A++ A   
Sbjct: 126 LVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIG 185

Query: 199 INVNAIAPGFIASDMTAKLGEDLEKKILEKIPL-GRYGQPEEVAGLVEFLALNPAAGYIT 257
           I V  IAPG   + +   L E +   +  ++P   R G P E A LV+ +       ++ 
Sbjct: 186 IRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFPSRLGDPAEYAHLVQAII---ENPFLN 242

Query: 258 GQVLTI 263
           G+V+ +
Sbjct: 243 GEVIRL 248

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  169 bits (429), Expect = 1e-52
 Identities = 53/250 (21%), Positives = 113/250 (45%), Gaps = 13/250 (5%)

Query: 28  VAVVTGAS--RGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDV 85
            A+V G +  R +G A+A  L +AG +V ++Y   ++      +++  + G AL F  DV
Sbjct: 10  KALVMGVTNQRSLGFAIAAKLKEAGAEVALSY--QAERLRPEAEKLAEALGGALLFRADV 67

Query: 86  SKEADVESMIKTAVDAWGTVDILINNAGITRDT----LLMRMKKSQWQDVIDLNLTGVFL 141
           +++ +++++     +A+G +D L++              +  ++  W   ++++   +  
Sbjct: 68  TQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVA 127

Query: 142 CTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINV 201
             + A  ++ +   G I+ +               + AKA +    + +A E   + + V
Sbjct: 128 VARRAEPLLREG--GGIVTLTYYASEKVVPKYNVMAIAKAALEASVRYLAYELGPKGVRV 185

Query: 202 NAIAPGFIASD--MTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQ 259
           NAI+ G + +    +      +  ++ +  PL R    EEV  L  FL  +P A  ITG+
Sbjct: 186 NAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLL-SPLASGITGE 244

Query: 260 VLTIDGGMVM 269
           V+ +D G  +
Sbjct: 245 VVYVDAGYHI 254

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  165 bits (417), Expect = 2e-50
 Identities = 56/281 (19%), Positives = 101/281 (35%), Gaps = 63/281 (22%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA+VTG ++GIG A+   L +     +V  AR     +   ++++A G        D+  
Sbjct: 5   VALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDD 64

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
              + ++       +G +D+L+NNAGI            Q +  +  N  G         
Sbjct: 65  LQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELL 124

Query: 148 KIMMKKKKGRIINIASVVGLVG-------------------------------------- 169
            ++  K +GR++N++S++ +                                        
Sbjct: 125 PLI--KPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVH 182

Query: 170 ---NIGQANYSAAKAGVIGLTKTVAKEYASR----NINVNAIAPGFIASDMTAKLGEDLE 222
                  + Y   K GV  L++  A++ + +     I +NA  PG++ +DM         
Sbjct: 183 QKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPKAT--- 239

Query: 223 KKILEKIPLGRYGQPEEVAGLVEFLALNPA-AGYITGQVLT 262
                         PEE A    +LAL P  A    GQ ++
Sbjct: 240 ------------KSPEEGAETPVYLALLPPDAEGPHGQFVS 268

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  163 bits (413), Expect = 9e-50
 Identities = 57/257 (22%), Positives = 99/257 (38%), Gaps = 26/257 (10%)

Query: 27  PVAVVTGASRGIGRAVATSLGKAGCKVLVNYA-----RSSKEAEEVCKEIEASGGQALTF 81
            V ++TG S GIG  +A  L     +    YA     ++     E  + +    G   T 
Sbjct: 3   TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETL 62

Query: 82  GGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFL 141
             DV     V +  +      G VD+L+ NAG+     L  + +     V+D+N+ G   
Sbjct: 63  QLDVRDSKSVAAARER--VTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVR 120

Query: 142 CTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINV 201
             QA    M ++  GR++   SV GL+G      Y A+K  + GL +++A       +++
Sbjct: 121 MLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHL 180

Query: 202 NAIAPGFIASDMTAKLGEDLEKKI-----------------LEKIPLGRYGQPEEVAGLV 244
           + I  G + +    K+    E+ +                  +++       PEEVA + 
Sbjct: 181 SLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAEVF 240

Query: 245 EFLAL--NPAAGYITGQ 259
                   P   Y T +
Sbjct: 241 LTALRAPKPTLRYFTTE 257

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  162 bits (410), Expect = 1e-49
 Identities = 58/253 (22%), Positives = 100/253 (39%), Gaps = 17/253 (6%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
             +VTGAS+GIGR +A  L K G  V+V         + V   +E     A    G +  
Sbjct: 16  KVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMED 75

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
               E  +  A    G +D+LI N        L        +  +++N     + T AA 
Sbjct: 76  MTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAAL 135

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASR--NINVNAIA 205
             M+K+  G I+ ++S+ G V     A YSA+K  + G   ++ KEY+    N+++    
Sbjct: 136 P-MLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCV 194

Query: 206 PGFIASDMTAKLG-----------EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPA-- 252
            G I ++   K             E+   +I++   L +     + +     L  NP+  
Sbjct: 195 LGLIDTETAMKAVSGIVHMQAAPKEECALEIIKGGALRQEEVYYDSSLWTTLLIRNPSRK 254

Query: 253 -AGYITGQVLTID 264
              ++      +D
Sbjct: 255 ILEFLYSTSYNMD 267

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  155 bits (393), Expect = 4e-47
 Identities = 61/255 (23%), Positives = 99/255 (38%), Gaps = 24/255 (9%)

Query: 28  VAVVTGASRGIGRAVATSLGK---AGCKVLVNYARSSKEAEEVCKEIEA--SGGQALTFG 82
           V V+TGASRG GRA+A  L +    G  +LV+ ARS     ++ +E+ A     + +   
Sbjct: 8   VCVLTGASRGFGRALAPQLARLLSPGSVMLVS-ARSESMLRQLKEELGAQQPDLKVVLAA 66

Query: 83  GDVSKEADVESMI----KTAVDAWGTVDILINNAGITRDTLLMRMKK---SQWQDVIDLN 135
            D+  EA V+ ++    +          +LINNA    D     +     ++  +   LN
Sbjct: 67  ADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALN 126

Query: 136 LTGVFLCTQAAAKIMMKKKKGRII--NIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKE 193
           LT +   T                  NI+S+  L    G   Y A KA    L + +A E
Sbjct: 127 LTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQVLAAE 186

Query: 194 YASRNINVNAIAPGFIASDMTAKLGE-----DLEKKILEKIPLGRYGQPEEVAGLVEFLA 248
               ++ V + APG + +DM     E     +L  K+ +    G        A  +  L 
Sbjct: 187 E--PSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKLLGLL 244

Query: 249 LNPAAGYITGQVLTI 263
                 + +G  +  
Sbjct: 245 --QKDTFQSGAHVDF 257

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score =  155 bits (392), Expect = 6e-47
 Identities = 43/249 (17%), Positives = 93/249 (37%), Gaps = 14/249 (5%)

Query: 28  VAVVTGASR--GIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDV 85
             +VTG +    I   +A ++ + G ++   Y     + +   +E  A  G  +    DV
Sbjct: 7   RILVTGVASKLSIAYGIAQAMHREGAELAFTYQND--KLKGRVEEFAAQLGSDIVLQCDV 64

Query: 86  SKEADVESMIKTAVDAWGTVDILINNAGITRDTLL-----MRMKKSQWQDVIDLNLTGVF 140
           +++A +++M       W   D  +++ G      L       + +  ++   D++     
Sbjct: 65  AEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFV 124

Query: 141 LCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNIN 200
              +A   ++       ++ ++ +              AKA +    + +A       + 
Sbjct: 125 AMAKACRSMLNPGS--ALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVR 182

Query: 201 VNAIAPGFIASD--MTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITG 258
           VNAI+ G I +      K    +        P+ R    E+V     FL  +  +  I+G
Sbjct: 183 VNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLC-SDLSAGISG 241

Query: 259 QVLTIDGGM 267
           +V+ +DGG 
Sbjct: 242 EVVHVDGGF 250

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score =  154 bits (388), Expect = 4e-46
 Identities = 68/283 (24%), Positives = 109/283 (38%), Gaps = 42/283 (14%)

Query: 26  APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQ-------- 77
            PVA+VTGA++ +GR++A  L   G  V ++Y RS+ EA  +   + A            
Sbjct: 2   VPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQAD 61

Query: 78  ----------ALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQ 127
                            V+       ++      WG  D+L+NNA     T L+R  +  
Sbjct: 62  LSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDG 121

Query: 128 WQ--------------DVIDLNLTGVFLCT------QAAAKIMMKKKKGRIINIASVVGL 167
            +              D+   N    +          A      +     IIN+   +  
Sbjct: 122 HEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTN 181

Query: 168 VGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILE 227
              +G   Y+ AK  + GLT++ A E A   I VN + PG     +   +   + +    
Sbjct: 182 QPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLS--VLVDDMPPAVWEGHRS 239

Query: 228 KIPL-GRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 269
           K+PL  R     EV+ +V FL  +  A YITG  + +DGG  +
Sbjct: 240 KVPLYQRDSSAAEVSDVVIFLC-SSKAKYITGTCVKVDGGYSL 281

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  143 bits (360), Expect = 3e-42
 Identities = 51/271 (18%), Positives = 95/271 (35%), Gaps = 56/271 (20%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           + V++G + GIG A    L  AG +++    R ++   ++                    
Sbjct: 3   IIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIADLSTA----------------- 45

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
           E   +++          +D L+  AG+   T           +V+ +N  G      A  
Sbjct: 46  EGRKQAIADVLAKCSKGMDGLVLCAGLGPQT-------KVLGNVVSVNYFGATELMDAFL 98

Query: 148 K---------------------------IMMKKKKGRIINIASVVGLVGNIG-QANYSAA 179
                                       + +  + G      ++V   G  G    Y+ +
Sbjct: 99  PALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGS 158

Query: 180 KAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGED---LEKKILEKIPLGRYGQ 236
           K  +    +  A  +    + +N IAPG   + +     +D    E       P+GR  +
Sbjct: 159 KNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRRAE 218

Query: 237 PEEVAGLVEFLALNPAAGYITGQVLTIDGGM 267
           P E+A ++ FL  +PAA Y+ G  + IDGG+
Sbjct: 219 PSEMASVIAFLM-SPAASYVHGAQIVIDGGI 248

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  140 bits (354), Expect = 1e-41
 Identities = 37/253 (14%), Positives = 71/253 (28%), Gaps = 30/253 (11%)

Query: 25  EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGD 84
           EA   +V G    +G     +       V       ++EA             ++     
Sbjct: 1   EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASA-----------SVIVKMT 49

Query: 85  VSKEADVESMIKTAVDAWG--TVDILINNA-GITRDTLLMRMKKSQWQDVIDLNLTGVFL 141
            S     + +        G   VD ++  A G        +        +   ++    +
Sbjct: 50  DSFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTI 109

Query: 142 CTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYAS--RNI 199
            +  A      K+ G +    +   L G  G   Y  AK  V  L +++A + +      
Sbjct: 110 SSHLA--TKHLKEGGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGA 167

Query: 200 NVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITG- 258
              A+ P  + + M  K   +             +   E +                +G 
Sbjct: 168 AAIAVLPVTLDTPMNRKSMPE--------ADFSSWTPLEFLVETFHDWI-TGNKRPNSGS 218

Query: 259 --QVLTIDGGMVM 269
             QV+T DG   +
Sbjct: 219 LIQVVTTDGKTEL 231

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  133 bits (335), Expect = 8e-39
 Identities = 35/243 (14%), Positives = 76/243 (31%), Gaps = 26/243 (10%)

Query: 29  AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKE 88
            +V G    +G A+     K G  VL     ++ +A+             +   G+ +  
Sbjct: 5   VIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADS-----------NILVDGNKNWT 53

Query: 89  ADVESMIKTAVDA--WGTVDILINNAGITR-DTLLMRMKKSQWQDVIDLNLTGVFLCTQA 145
              +S+++    +     VD +   AG     +   +        +I  ++    +  + 
Sbjct: 54  EQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAK- 112

Query: 146 AAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYAS--RNINVNA 203
                  K  G +    +   +        Y  AKA V  LT ++A + +    N  V  
Sbjct: 113 -LATTHLKPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLT 171

Query: 204 IAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTI 263
           I P  + + M  K         +       +     ++  +       ++   +G +L I
Sbjct: 172 IMPVTLDTPMNRKW--------MPNADHSSWTPLSFISEHLLKWTTETSSRPSSGALLKI 223

Query: 264 DGG 266
              
Sbjct: 224 TTE 226

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  133 bits (334), Expect = 2e-38
 Identities = 42/211 (19%), Positives = 80/211 (37%), Gaps = 25/211 (11%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKV-LVNYARSSKEAEEVCKEIEASGGQALTFGGDVS 86
             VVTGA+RGIG  +   L K      ++  AR  ++A E+         +       V+
Sbjct: 5   SVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIK---DSRVHVLPLTVT 61

Query: 87  KEADVESMIKTAVDAWGT--VDILINNAGITRDT-LLMRMKKSQWQDVIDLNLTGVFLCT 143
            +  +++ +    +  G+  + +LINNAG+           ++   + +D+N T V L T
Sbjct: 62  CDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLT 121

Query: 144 QAAAKIMMKKKKGRIINIASV------------------VGLVGNIGQANYSAAKAGVIG 185
           Q    ++         +  SV                             Y  +KA +  
Sbjct: 122 QKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINM 181

Query: 186 LTKTVAKEYASRNINVNAIAPGFIASDMTAK 216
             +T+A +    N+ V    PG++ +++  K
Sbjct: 182 FGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK 212

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score =  126 bits (316), Expect = 2e-35
 Identities = 39/246 (15%), Positives = 89/246 (36%), Gaps = 9/246 (3%)

Query: 28  VAVVTGAS--RGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDV 85
             ++ G +  + I   +A S    G  +   Y   ++  E+  + I         +  DV
Sbjct: 7   KGLIVGVANNKSIAYGIAQSCFNQGATLAFTY--LNESLEKRVRPIAQELNSPYVYELDV 64

Query: 86  SKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVF--LCT 143
           SKE   +S+  +     G++D ++++        L        +   +  +      L  
Sbjct: 65  SKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIE 124

Query: 144 QAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNA 203
                  +      ++ ++ +              AKA +    + +A +    +I VNA
Sbjct: 125 LTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNA 184

Query: 204 IAPGFIASDMTAKLGED--LEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL 261
           ++ G I +  ++ + +   + K      PL +    EEV     +L  +  +  ++G+V 
Sbjct: 185 LSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLL-SSLSSGVSGEVH 243

Query: 262 TIDGGM 267
            +D G 
Sbjct: 244 FVDAGY 249

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score =  122 bits (306), Expect = 2e-34
 Identities = 37/258 (14%), Positives = 90/258 (34%), Gaps = 38/258 (14%)

Query: 29  AVVTGASRGIGRAVAT---SLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDV 85
            ++TG +RG+G  +     +L +    +     R+ ++A+E+ +++  +         D+
Sbjct: 5   ILITGCNRGLGLGLVKALLNLPQPPQHL-FTTCRNREQAKEL-EDLAKNHSNIHILEIDL 62

Query: 86  SKEADVESMIKTA--VDAWGTVDILINNA-GITRDTLLMRMKKSQWQDVIDLNLTGVFLC 142
                 + ++     V     +++L NNA    +   +  ++  +  D +  N     + 
Sbjct: 63  RNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIML 122

Query: 143 TQAAAKIMMKKKKGRIIN--------------IASVVGLVGNIGQANYSAAKAGVIGLTK 188
            +A   ++ K  K                   I   +    + G   Y  +K+ +   TK
Sbjct: 123 AKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAATK 182

Query: 189 TVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLA 248
           +++ +   + I   ++ PG++ +DM                PL       ++   +  L 
Sbjct: 183 SLSVDLYPQRIMCVSLHPGWVKTDMGGS-----------SAPLDVPTSTGQIVQTISKLG 231

Query: 249 LNPAAGYITGQVLTIDGG 266
                    G  +  DG 
Sbjct: 232 EKQ-----NGGFVNYDGT 244

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score =  117 bits (293), Expect = 3e-32
 Identities = 39/257 (15%), Positives = 84/257 (32%), Gaps = 18/257 (7%)

Query: 28  VAVVTGA--SRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDV 85
             +V+G      I   +A    + G ++++      +  + +   + A          + 
Sbjct: 8   RILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNE 67

Query: 86  SKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQ--WQDVIDLNLTGVFLCT 143
              A +   +  A+ A   +D ++++ G    T +         + DV        +   
Sbjct: 68  EHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYA 127

Query: 144 QAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNA 203
             A  ++     G  I                 + AK+ +  + + VA+E     +  N 
Sbjct: 128 SMAKALLPIMNPGGSIVGMDFDPSRAMPAYNWMTVAKSALESVNRFVAREAGKYGVRSNL 187

Query: 204 IAPGFIASDMTAKLG------------EDLEKKILEKIPLGR-YGQPEEVAGLVEFLALN 250
           +A G I +   + +             + LE+   ++ P+G        VA  V  L  +
Sbjct: 188 VAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVCALL-S 246

Query: 251 PAAGYITGQVLTIDGGM 267
                 TG ++  DGG 
Sbjct: 247 DWLPATTGDIIYADGGA 263

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score =  107 bits (266), Expect = 5e-28
 Identities = 50/277 (18%), Positives = 96/277 (34%), Gaps = 38/277 (13%)

Query: 28  VAVVTGAS--RGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQ-------- 77
            A + G +   G G AVA SL  AG ++LV     +    E                   
Sbjct: 10  RAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSL 69

Query: 78  -----------------------ALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGI 114
                                          S    V+   +     +G++DIL+++   
Sbjct: 70  MEIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLAN 129

Query: 115 TRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQA 174
             +     ++ S+   +  ++ +     +  +  + +    G  I++  +       G  
Sbjct: 130 GPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASERIIPGYG 189

Query: 175 N-YSAAKAGVIGLTKTVAKEYASRN-INVNAIAPGFIASDMTAKLG--EDLEKKILEKIP 230
              S+AKA +   T+ +A E   +  I VN I+ G + S     +G  + + +      P
Sbjct: 190 GGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIEYSYNNAP 249

Query: 231 LGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM 267
           + +    +EV     FL  +P A  ITG  + +D G+
Sbjct: 250 IQKTLTADEVGNAAAFLV-SPLASAITGATIYVDNGL 285

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score =  101 bits (251), Expect = 8e-26
 Identities = 37/321 (11%), Positives = 88/321 (27%), Gaps = 83/321 (25%)

Query: 28  VAVVTGA--SRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGG-- 83
           +  + G   + G G  +A  L K   K++               +        +      
Sbjct: 4   ICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKK 63

Query: 84  -----------------------------DVSKEADVESMIKTAVDAWGTVDILINNAGI 114
                                        ++ +   +E +       +G +++L+++   
Sbjct: 64  MNILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLAN 123

Query: 115 TRDTL--LMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIG 172
            ++    L+   +  + D +  +   +    +    IM  +     +        V    
Sbjct: 124 AKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSSIISLTY-HASQKVVPGY 182

Query: 173 QANYSAAKAGVIGLTKTVAKEYAS-RNINVNAIAPGFIASDMTAKLG------------- 218
               S+AKA +   T+ +A       NI +N I+ G + S     +              
Sbjct: 183 GGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNTNQN 242

Query: 219 --------------------------------EDLEKKILEKIPLGRYGQPEEVAGLVEF 246
                                           +   +   +  PL +     ++  +  F
Sbjct: 243 KNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASF 302

Query: 247 LALNPAAGYITGQVLTIDGGM 267
           L  +  +  ITGQ + +D G+
Sbjct: 303 LL-SRESRAITGQTIYVDNGL 322

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 89.0 bits (219), Expect = 4e-22
 Identities = 30/208 (14%), Positives = 71/208 (34%), Gaps = 2/208 (0%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSK 87
           VA++ G    +G+ +A  L   G +++V  +R  ++AE    E     G A   G     
Sbjct: 3   VALLGGTG-NLGKGLALRLATLGHEIVV-GSRREEKAEAKAAEYRRIAGDASITGMKNED 60

Query: 88  EADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAA 147
            A+   +    +     +D   +   I R+ +++       +       +      +  A
Sbjct: 61  AAEACDIAVLTIPWEHAIDTARDLKNILREKIVVSPLVPVSRGAKGFTYSSERSAAEIVA 120

Query: 148 KIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPG 207
           +++  +K    ++            + ++     G    +K V     S    +  +  G
Sbjct: 121 EVLESEKVVSALHTIPAARFANLDEKFDWDVPVCGDDDESKKVVMSLISEIDGLRPLDAG 180

Query: 208 FIASDMTAKLGEDLEKKILEKIPLGRYG 235
            +++    +    L   I+    +G  G
Sbjct: 181 PLSNSRLVESLTPLILNIMRFNGMGELG 208

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 84.6 bits (208), Expect = 1e-20
 Identities = 28/190 (14%), Positives = 59/190 (31%), Gaps = 15/190 (7%)

Query: 11  ATIEQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKE 70
           A +      A  +V+   AVV   +  +G   A  L   G +V++   +  K        
Sbjct: 8   AGVALVVKAAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSV 67

Query: 71  IEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQD 130
            +            V+  A   +   +  +A      +     I     L  + ++ WQ+
Sbjct: 68  NK---------RFKVNVTAAETADDASRAEAVKGAHFVFTAGAIG----LELLPQAAWQN 114

Query: 131 VIDLNLTGVFLCTQAAAKIMMKK-KKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKT 189
              + +   +          +    KG+        G +G IG       +A +  L ++
Sbjct: 115 ESSIEIVADYNAQPPLGIGGIDATDKGKEYGGKRAFGALG-IGGLKLKLHRACIAKLFES 173

Query: 190 VAKEYASRNI 199
               + +  I
Sbjct: 174 SEGVFDAEEI 183

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 83.5 bits (205), Expect = 1e-19
 Identities = 40/231 (17%), Positives = 80/231 (34%), Gaps = 20/231 (8%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLVNYARS---SKEAEEVCKEIEASGGQALTFGGD 84
             +VTG + G+G  +A  L + G   L+  +RS   +  A E+  E+EA G +      D
Sbjct: 11  TVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACD 70

Query: 85  VSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQ 144
           V+    V  ++    D      +  + A    D  +  +   + +      + G     +
Sbjct: 71  VTDRESVRELLGGIGDDVPLSAV-FHAAATLDDGTVDTLTGERIERASRAKVLGARNLHE 129

Query: 145 AAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAI 204
               +  +      +  +S     G  G   Y+   A + GL    A++  S  +   A+
Sbjct: 130 ----LTRELDLTAFVLFSSFASAFGAPGLGGYAPGNAYLDGL----AQQRRSDGLPATAV 181

Query: 205 APGFIASDM--TAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAA 253
           A G  A        + +   +  + ++P      PE     ++        
Sbjct: 182 AWGTWAGSGMAEGPVADRFRRHGVIEMP------PETACRALQNALDRAEV 226

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 37.5 bits (86), Expect = 0.001
 Identities = 36/231 (15%), Positives = 83/231 (35%), Gaps = 28/231 (12%)

Query: 28  VAVVTGASRGIGRAVATSLGKAGCKVLV----NYARSSKEAEEVCKEIEASGGQALTFGG 83
           VA++TG +   G  +A  L + G +V        + +++  + + ++      +     G
Sbjct: 3   VALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYG 62

Query: 84  DVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCT 143
           D+S  +++  +++         D + N   ++     + +     +   D++  G     
Sbjct: 63  DLSDTSNLTRILR-----EVQPDEVYNLGAMSH----VAVSFESPEYTADVDAMGTLRLL 113

Query: 144 QAAAKIMMKKKKGRIINI--ASVVGLVGNIGQ---------ANYSAAKAGVIGLTKTVAK 192
           +A   + ++KK  R      + + GLV  I Q         + Y+ AK     +T    +
Sbjct: 114 EAIRFLGLEKKT-RFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRE 172

Query: 193 EYASRNINV---NAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEV 240
            Y     N    N  +P    + +T K+   +             G  + +
Sbjct: 173 SYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSL 223

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	269
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	100.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	100.0
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	100.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	100.0
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	100.0
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	100.0
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	100.0
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	100.0
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	100.0
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	100.0
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	100.0
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	100.0
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	100.0
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	100.0
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	100.0
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	100.0
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	100.0
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	100.0
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	100.0
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	100.0
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	100.0
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	100.0
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	100.0
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	100.0
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	100.0
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	100.0
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	100.0
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	100.0
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	100.0
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	100.0
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	100.0
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	100.0
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	100.0
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	100.0
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	100.0
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	100.0
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	100.0
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.86
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.8
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.79
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.78
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.78
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.76
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.73
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.73
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.73
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.72
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.72
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.71
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.7
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.7
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.69
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.69
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.68
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.68
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.67
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.66
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.65
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.63
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.63
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.62
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.4
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.31
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.31
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.28
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.22
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.09
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.05
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	99.0
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	98.09
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	98.01
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.97
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.96
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.88
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.86
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.8
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.76
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.72
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.68
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.63
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.58
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.55
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.55
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.5
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.47
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.47
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.39
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.37
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.33
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.22
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.2
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	97.2
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.07
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	97.07
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.04
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.0
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.0
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	96.97
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	96.92
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	96.88
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.88
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.86
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	96.84
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.82
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	96.82
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	96.75
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.74
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	96.74
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	96.7
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.69
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	96.68
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	96.68
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	96.67
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.67
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	96.62
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	96.61
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	96.59
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.47
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.45
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.39
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	96.32
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	96.31
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	96.28
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	96.24
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.23
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	96.13
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.11
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	96.11
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.03
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	95.99
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	95.98
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	95.97
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	95.94
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	95.9
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	95.82
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	95.79
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	95.61
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	95.55
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	95.54
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	95.44
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	95.43
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	95.35
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	95.21
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	94.9
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	94.8
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	94.78
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	94.77
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.62
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	94.45
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.38
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	94.3
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	94.21
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	94.2
d2fr1a2	209	Erythromycin synthase, eryAI, 1st ketoreductase mo	94.18
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	94.16
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	94.15
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	94.13
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	94.11
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	94.02
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	93.96
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	93.95
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	93.88
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	93.83
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	93.83
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	93.65
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	93.4
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	93.35
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	93.31
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	93.3
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.13
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	93.11
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	93.07
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	92.98
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	92.87
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	92.84
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	92.78
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	92.78
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	92.77
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	92.72
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	92.7
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	92.67
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	92.66
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	92.55
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	92.48
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	92.33
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	92.23
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	92.16
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	92.05
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	91.82
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	91.65
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	91.17
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	91.06
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	90.58
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	90.44
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	90.38
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	90.26
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	90.11
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	90.09
d1v71a1	318	Hypothetical protein C320.14 (SPCC320.14, SPCC330.	90.04
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	89.86
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	89.78
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	89.65
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	89.56
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	89.54
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	89.36
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	89.23
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	89.09
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	88.66
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	88.61
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	88.43
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	88.4
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	88.32
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	88.29
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	88.07
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	88.04
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	87.85
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	87.63
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	87.59
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	87.51
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	87.41
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	87.16
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	86.82
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	86.5
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	86.44
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	86.37
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	86.12
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	85.76
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	85.59
d2o14a2	208	Hypothetical protein YxiM {Bacillus subtilis [TaxI	85.22
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	84.8
d1peya_	119	Sporulation response regulator Spo0F {Bacillus sub	84.73
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	84.58
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	84.48
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	84.24
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	84.2
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	84.18
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	84.16
d1pvva2	163	Ornithine transcarbamoylase {Archaeon Pyrococcus f	84.14
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	83.88
d1w4xa2	235	Phenylacetone monooxygenase {Thermobifida fusca [T	82.92
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	82.92
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	82.67
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	82.65
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	82.58
d1jbqa_	355	Cystathionine beta-synthase {Human (Homo sapiens)	82.17
d1fcja_	302	O-acetylserine sulfhydrylase (Cysteine synthase) {	81.96
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	80.89
d1fl2a2	126	Alkyl hydroperoxide reductase subunit F (AhpF), C-	80.82
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	80.71
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	80.31
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	80.04
d1vlva2	161	Ornithine transcarbamoylase {Thermotoga maritima [	80.01

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=8.5e-59  Score=386.08  Aligned_cols=248  Identities=51%  Similarity=0.823  Sum_probs=232.8

Q ss_pred             cccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHH
Q 024338           19 EAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTA   98 (269)
Q Consensus        19 ~~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~   98 (269)
                      +....++||++|||||++|||+++|+.|+++|++|++ .+|+++.++++.+++++.+.++..+.+|++|+++++++++++
T Consensus         3 n~~f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~-~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~   81 (251)
T d2c07a1           3 NYYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVIC-ISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKI   81 (251)
T ss_dssp             CCCCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEE-EESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccccCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEE-EECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence            4557789999999999999999999999999999888 589999999999999888889999999999999999999999


Q ss_pred             HHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHH
Q 024338           99 VDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSA  178 (269)
Q Consensus        99 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~  178 (269)
                      .+++|+||+||||||.....++.+.+.++|++.+++|+.+++.++|+++|.|.+++.|+||++||..+..+.++...|++
T Consensus        82 ~~~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~a  161 (251)
T d2c07a1          82 LTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSS  161 (251)
T ss_dssp             HHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHH
T ss_pred             HHhcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCCCHHHHH
Confidence            99999999999999998888999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccc
Q 024338          179 AKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITG  258 (269)
Q Consensus       179 sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G  258 (269)
                      ||+|+.+|+++++.|++++|||||+|+||+++|++.....++..+......|++++.+|+|+|++++||+ +++++|+||
T Consensus       162 sKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~-S~~s~~itG  240 (251)
T d2c07a1         162 SKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNIISNIPAGRMGTPEEVANLACFLS-SDKSGYING  240 (251)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHH-SGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh-CchhCCCcC
Confidence            9999999999999999999999999999999999998888888888899999999999999999999999 678899999


Q ss_pred             cEEEecCCcc
Q 024338          259 QVLTIDGGMV  268 (269)
Q Consensus       259 ~~i~~dgg~~  268 (269)
                      |+|.+|||++
T Consensus       241 ~~i~vDGG~s  250 (251)
T d2c07a1         241 RVFVIDGGLS  250 (251)
T ss_dssp             CEEEESTTSC
T ss_pred             cEEEECCCcC
Confidence            9999999986

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=1.3e-58  Score=383.34  Aligned_cols=243  Identities=82%  Similarity=1.227  Sum_probs=234.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCcc
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVD  106 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id  106 (269)
                      +++|||||++|||+++|++|+++|++|++.+.|+++.++++.+++++.+.++.++++|++|+++++++++++.+++|++|
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   81 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            68999999999999999999999999998778899999999999998888999999999999999999999999999999


Q ss_pred             EEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHHHHH
Q 024338          107 ILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGL  186 (269)
Q Consensus       107 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~~  186 (269)
                      +||||||.....++.+.+.++|++.+++|+.+++.++|+++|+|++++.|+||++||..+..+.++...|++||+|+.+|
T Consensus        82 iLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~~l  161 (244)
T d1edoa_          82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGF  161 (244)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHH
T ss_pred             ccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCCCHHHHHHHHHHHHC
Confidence            99999999988999999999999999999999999999999999998999999999999999999999999999999999


Q ss_pred             HHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEEEecCC
Q 024338          187 TKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGG  266 (269)
Q Consensus       187 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg  266 (269)
                      +++|+.|++++|||||+|+||+++|++.....++..+...+..|++++.+|+|+|+++.||+.+++++|+|||+|.+|||
T Consensus       162 tk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~R~~~p~dvA~~v~fLa~S~~a~~itG~~i~vdGG  241 (244)
T d1edoa_         162 SKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQAFTIDGG  241 (244)
T ss_dssp             HHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHHHHHHHTSCTTCSCBCHHHHHHHHHHHHHCSGGGGCCSCEEEESTT
T ss_pred             hHHHHHHHhhhCcEEEEEecceeccHHHHHhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHCCchhcCCcCCeEEeCCC
Confidence            99999999999999999999999999998888888888889999999999999999999998678899999999999999


Q ss_pred             ccC
Q 024338          267 MVM  269 (269)
Q Consensus       267 ~~~  269 (269)
                      +++
T Consensus       242 ~si  244 (244)
T d1edoa_         242 IAI  244 (244)
T ss_dssp             TTC
T ss_pred             eeC
Confidence            975

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.2e-58  Score=383.19  Aligned_cols=242  Identities=50%  Similarity=0.804  Sum_probs=230.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      ||+||+++||||++|||+++|+.|+++|++|++ .+|+++.++++.+++   +.+...+.+|++|+++++++++++.+++
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~-~~r~~~~l~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   76 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIG-TATSENGAQAISDYL---GANGKGLMLNVTDPASIESVLEKIRAEF   76 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEE-EESSHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEE-EeCCHHHHHHHHHHh---CCCCcEEEEEecCHHHhhhhhhhhhccc
Confidence            689999999999999999999999999999988 589999998888877   3577889999999999999999999999


Q ss_pred             CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHH
Q 024338          103 GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAG  182 (269)
Q Consensus       103 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  182 (269)
                      |+||+||||||.....++.+.+.++|++.+++|+.+++.++|+++|+|++++.|+||++||..+..+.++..+|++||+|
T Consensus        77 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaa  156 (243)
T d1q7ba_          77 GEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAG  156 (243)
T ss_dssp             CSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHH
T ss_pred             CCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCCCHHHHHHHHH
Confidence            99999999999998899999999999999999999999999999999999889999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEEE
Q 024338          183 VIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLT  262 (269)
Q Consensus       183 l~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~  262 (269)
                      +.+|+++++.|++++|||||+|+||+++|++.+...++..+...+..|++++.+|+|+|++++||+ +++++|+|||+|.
T Consensus       157 l~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~-S~~s~~itGq~i~  235 (243)
T d1q7ba_         157 LIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPAGRLGGAQEIANAVAFLA-SDEAAYITGETLH  235 (243)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHH-SGGGTTCCSCEEE
T ss_pred             HHHHHHHHHHHhCccCeEEEEEecceEechhhhhhhhhHHHHHHhcCCCCCCCCHHHHHHHHHHHh-CchhcCCcCCeEE
Confidence            999999999999999999999999999999998888888888888999999999999999999999 6788899999999


Q ss_pred             ecCCccC
Q 024338          263 IDGGMVM  269 (269)
Q Consensus       263 ~dgg~~~  269 (269)
                      +|||+.|
T Consensus       236 vdGG~~~  242 (243)
T d1q7ba_         236 VNGGMYM  242 (243)
T ss_dssp             ESTTSSC
T ss_pred             ECCCeEe
Confidence            9999876

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.1e-57  Score=380.14  Aligned_cols=246  Identities=33%  Similarity=0.553  Sum_probs=231.4

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      .|+|+||++|||||++|||+++|++|+++|++|++ .+|+++.++++.+++++.+.++.++++|++|+++++++++++.+
T Consensus         6 ~m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~-~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~   84 (255)
T d1fmca_           6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVV-SDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAIS   84 (255)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEE-EESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999988 58999999999999999888999999999999999999999999


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhH
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                      ++|++|+||||||+....++ +.+.++|++.+++|+.+++.++|.++|+|.+++.++||++||..+..+.++...|++||
T Consensus        85 ~~g~iDilvnnAG~~~~~~~-e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~~~~~Y~asK  163 (255)
T d1fmca_          85 KLGKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSK  163 (255)
T ss_dssp             HHSSCCEEEECCCCCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHH
T ss_pred             HcCCCCEeeeCCcCCCCCcc-cCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccccccccchhHH
Confidence            99999999999998877666 78999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc-ChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCcccc
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL-GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQ  259 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~  259 (269)
                      +|+.+|++++|.|++++|||||+|+||+++|++.... .++..+...+..|++++.+|+|+|++++||+ +++++|+|||
T Consensus       164 aal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~e~~~~~~~~~pl~R~g~pedvA~~v~fL~-S~~s~~itG~  242 (255)
T d1fmca_         164 AAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLC-SPAASWVSGQ  242 (255)
T ss_dssp             HHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSSCSCBCHHHHHHHHHHHH-SGGGTTCCSC
T ss_pred             HHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh-CchhcCCcCC
Confidence            9999999999999999999999999999999987654 4566777888999999999999999999999 6788999999


Q ss_pred             EEEecCCccC
Q 024338          260 VLTIDGGMVM  269 (269)
Q Consensus       260 ~i~~dgg~~~  269 (269)
                      +|.+|||++.
T Consensus       243 ~i~vDGG~~~  252 (255)
T d1fmca_         243 ILTVSGGGVQ  252 (255)
T ss_dssp             EEEESTTSCC
T ss_pred             EEEECcCccc
Confidence            9999999863

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=1.6e-57  Score=380.12  Aligned_cols=248  Identities=37%  Similarity=0.616  Sum_probs=229.3

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      .++|+||++|||||++|||+++|+.|+++|++|+++.+++++.++++.+++++.+.++.++++|++|+++++++++++.+
T Consensus         2 ~~dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (261)
T d1geea_           2 YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIK   81 (261)
T ss_dssp             CGGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            35799999999999999999999999999999998644456678889999998888999999999999999999999999


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCC-eEEEEcCCccccCCCCChhhHHh
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKG-RIINIASVVGLVGNIGQANYSAA  179 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~-~iv~isS~~~~~~~~~~~~Y~~s  179 (269)
                      ++|+||+||||||+....++.+.+.++|++.+++|+.+++.++|+++|.|.+++.+ +||++||..+..+.|+...|++|
T Consensus        82 ~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~~~~Y~as  161 (261)
T d1geea_          82 EFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAAS  161 (261)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             HhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCccccccccC
Confidence            99999999999999888899999999999999999999999999999999877655 59999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc--ChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCcc
Q 024338          180 KAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL--GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYIT  257 (269)
Q Consensus       180 K~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~  257 (269)
                      |+|+.+|+++|+.|++++|||||+|+||+++||+....  .++..+...+..|++++.+|+|+|++++||+ +++++|+|
T Consensus       162 Kaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~-S~~s~~it  240 (261)
T d1geea_         162 KGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLA-SSEASYVT  240 (261)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHH-SGGGTTCC
T ss_pred             CccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh-CchhcCCc
Confidence            99999999999999999999999999999999987543  3455667778899999999999999999999 67889999


Q ss_pred             ccEEEecCCccC
Q 024338          258 GQVLTIDGGMVM  269 (269)
Q Consensus       258 G~~i~~dgg~~~  269 (269)
                      ||+|.||||++|
T Consensus       241 G~~i~vDGG~sl  252 (261)
T d1geea_         241 GITLFADGGMTL  252 (261)
T ss_dssp             SCEEEESTTGGG
T ss_pred             CCeEEECCCeeC
Confidence            999999999975

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=7.5e-57  Score=374.15  Aligned_cols=244  Identities=35%  Similarity=0.608  Sum_probs=226.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHH-cCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEA-SGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      +|+||++|||||++|||+++|+.|+++|++|++ .+|+.+++++..+++.+ .+.++.++.+|++|+++++++++++.++
T Consensus         2 ~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i-~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (251)
T d1vl8a_           2 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVV-ASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEK   80 (251)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            689999999999999999999999999999988 58999998888888754 4778999999999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcc-ccCCCCChhhHHhH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVG-LVGNIGQANYSAAK  180 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~-~~~~~~~~~Y~~sK  180 (269)
                      +|+||+||||||+....++.+.+.++|++.+++|+.+++.++|.++|.|++++.|+||+++|..+ ..+.++...|++||
T Consensus        81 ~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~~~~~Y~asK  160 (251)
T d1vl8a_          81 FGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASK  160 (251)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccCccccchHHHH
Confidence            99999999999998888999999999999999999999999999999999989999999999876 45778899999999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc--ChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccc
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL--GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITG  258 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G  258 (269)
                      +|+.+|+++++.|++++|||||+|+||+++|++.+..  .++..+...+..|++++.+|+|+|++++||+ +++++|+||
T Consensus       161 aal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~-S~~a~~itG  239 (251)
T d1vl8a_         161 GGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLA-SEEAKYVTG  239 (251)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHH-SGGGTTCCS
T ss_pred             HhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh-CchhCCCcC
Confidence            9999999999999999999999999999999987653  3455667788899999999999999999999 678899999


Q ss_pred             cEEEecCCcc
Q 024338          259 QVLTIDGGMV  268 (269)
Q Consensus       259 ~~i~~dgg~~  268 (269)
                      |+|.|||||+
T Consensus       240 ~~i~vDGG~t  249 (251)
T d1vl8a_         240 QIIFVDGGWT  249 (251)
T ss_dssp             CEEEESTTGG
T ss_pred             cEEEeCcCee
Confidence            9999999996

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1e-56  Score=371.43  Aligned_cols=240  Identities=39%  Similarity=0.599  Sum_probs=223.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      |+|+||++|||||++|||+++|+.|+++|++|++ .+|+++.+++..+++     +..++.||++|+++++++++++.++
T Consensus         1 M~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~-~~r~~~~l~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~   74 (242)
T d1ulsa_           1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVA-CDIEEGPLREAAEAV-----GAHPVVMDVADPASVERGFAEALAH   74 (242)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHTT-----TCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHc-----CCeEEEEecCCHHHHHHHHHHHHHh
Confidence            6789999999999999999999999999999988 588988887776654     4567899999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKA  181 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  181 (269)
                      +++||+||||||+....++.+.+.++|++.+++|+.+++.++|+++|.|.+++.+.++++|| .+..+.++..+|++||+
T Consensus        75 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss-~~~~~~~~~~~Y~asKa  153 (242)
T d1ulsa_          75 LGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTAS-RVYLGNLGQANYAASMA  153 (242)
T ss_dssp             HSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECC-GGGGCCTTCHHHHHHHH
T ss_pred             cCCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeecc-ccccCCCCCcchHHHHH
Confidence            99999999999998889999999999999999999999999999999998888888888777 56788999999999999


Q ss_pred             HHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEE
Q 024338          182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL  261 (269)
Q Consensus       182 al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i  261 (269)
                      |+.+|+++++.|++++|||||+|+||+++|++.....+...+......|++++.+|+|+|++++||+ +++++|+|||+|
T Consensus       154 al~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v~fL~-S~~s~~itG~~i  232 (242)
T d1ulsa_         154 GVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVREKAIAATPLGRAGKPLEVAYAALFLL-SDESSFITGQVL  232 (242)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHH-SGGGTTCCSCEE
T ss_pred             HHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh-chhhCCCCCcEE
Confidence            9999999999999999999999999999999998888888888899999999999999999999999 678899999999


Q ss_pred             EecCCccC
Q 024338          262 TIDGGMVM  269 (269)
Q Consensus       262 ~~dgg~~~  269 (269)
                      .+|||+++
T Consensus       233 ~vDGG~t~  240 (242)
T d1ulsa_         233 FVDGGRTI  240 (242)
T ss_dssp             EESTTTTT
T ss_pred             EECCCccC
Confidence            99999975

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=6.7e-57  Score=376.81  Aligned_cols=244  Identities=39%  Similarity=0.588  Sum_probs=218.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHc-CCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS-GGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      |+||++|||||++|||+++|+.|+++|++|+++..++.+.++++.+++.+. +.++.++.+|++|+++++++++++.+++
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            689999999999999999999999999999986444567788888887554 6789999999999999999999999999


Q ss_pred             CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHH
Q 024338          103 GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAG  182 (269)
Q Consensus       103 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  182 (269)
                      |+||+||||||+....++.+.+.++|++.+++|+.+++.++|+++|+|++++.|+||++||..+..+.|+...|++||+|
T Consensus        82 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaa  161 (260)
T d1x1ta1          82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHG  161 (260)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccCCcchhhhhhhh
Confidence            99999999999988899999999999999999999999999999999999899999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChH------------HHHHHHhcCCCCCCCCHHHHHHHHHHhccC
Q 024338          183 VIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGED------------LEKKILEKIPLGRYGQPEEVAGLVEFLALN  250 (269)
Q Consensus       183 l~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~  250 (269)
                      +.+|+++++.|++++|||||+|+||+++||+.....+.            ..+.+.+..|++++.+|+|+|++++||+ +
T Consensus       162 l~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~-S  240 (260)
T d1x1ta1         162 VVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLA-S  240 (260)
T ss_dssp             HHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHHHHHHHHHHH-S
T ss_pred             HHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh-C
Confidence            99999999999999999999999999999987544221            1233567789999999999999999999 6


Q ss_pred             CCCCCccccEEEecCCcc
Q 024338          251 PAAGYITGQVLTIDGGMV  268 (269)
Q Consensus       251 ~~~~~~~G~~i~~dgg~~  268 (269)
                      ++++|+|||+|.+|||++
T Consensus       241 ~~a~~itG~~i~vDGG~t  258 (260)
T d1x1ta1         241 DAAAQITGTTVSVDGGWT  258 (260)
T ss_dssp             GGGTTCCSCEEEESTTGG
T ss_pred             hhhCCCcCCEEEECcchh
Confidence            788999999999999986

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=1e-56  Score=375.18  Aligned_cols=246  Identities=29%  Similarity=0.483  Sum_probs=229.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      .+|+||++|||||++|||+++|+.|+++|++|++ .+|+++.++++.+++++.+.+..++.+|++|+++++++++++.++
T Consensus         4 f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~-~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (259)
T d2ae2a_           4 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYT-CSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANH   82 (259)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999888 589999999999999988889999999999999999999999999


Q ss_pred             cC-CccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhH
Q 024338          102 WG-TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       102 ~~-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                      ++ ++|++|||||+....++.+.+.++|++.+++|+.+++.++|.++|.|.+++.|+||++||..+..+.|+...|++||
T Consensus        83 ~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asK  162 (259)
T d2ae2a_          83 FHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATK  162 (259)
T ss_dssp             TTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             hCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccccccccchHHHH
Confidence            87 79999999999888899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC-----hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCC
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG-----EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGY  255 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~  255 (269)
                      +++.+|+++++.|++++|||||+|+||+++|++.+...     ++..+......|++++.+|+|+|++++||+ +++++|
T Consensus       163 aal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~pedvA~~v~fL~-S~~s~~  241 (259)
T d2ae2a_         163 GAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLC-FPAASY  241 (259)
T ss_dssp             HHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHHHHH-SGGGTT
T ss_pred             HHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh-CchhCC
Confidence            99999999999999999999999999999999865432     233455667899999999999999999999 678899


Q ss_pred             ccccEEEecCCccC
Q 024338          256 ITGQVLTIDGGMVM  269 (269)
Q Consensus       256 ~~G~~i~~dgg~~~  269 (269)
                      +|||+|.||||++.
T Consensus       242 itG~~i~VDGG~~a  255 (259)
T d2ae2a_         242 VTGQIIYVDGGLMA  255 (259)
T ss_dssp             CCSCEEEESTTGGG
T ss_pred             CcCcEEEECCCeEe
Confidence            99999999999873

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=1.3e-56  Score=374.14  Aligned_cols=244  Identities=35%  Similarity=0.542  Sum_probs=224.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHc--CCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS--GGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      +|+||++|||||++|||+++|+.|+++|++|++ .+|+.+.+++..+++.+.  +.++..++||++|+++++++++++.+
T Consensus         1 rl~gK~alITGas~GIG~aia~~la~~Ga~V~i-~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~   79 (258)
T d1iy8a_           1 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSL-VDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTE   79 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHH
Confidence            478999999999999999999999999999988 589999998888888664  45788999999999999999999999


Q ss_pred             hcCCccEEEEccCCCC-CCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHh
Q 024338          101 AWGTVDILINNAGITR-DTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAA  179 (269)
Q Consensus       101 ~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  179 (269)
                      ++|+||+||||||+.. ..++.+.+.++|++.+++|+.+++.++|+++|.|++++.|+||++||..+..+.|+...|++|
T Consensus        80 ~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~as  159 (258)
T d1iy8a_          80 RFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAA  159 (258)
T ss_dssp             HHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHHH
T ss_pred             HhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCCCchHHHHH
Confidence            9999999999999864 467899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc--------ChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCC
Q 024338          180 KAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL--------GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNP  251 (269)
Q Consensus       180 K~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~  251 (269)
                      |+|+.+|+++|+.|++++|||||+|+||+++||+.+..        ..+..+...+..|++++.+|+|+|++++||+ ++
T Consensus       160 Kaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~p~dvA~~v~fL~-S~  238 (258)
T d1iy8a_         160 KHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLL-SD  238 (258)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHT-SG
T ss_pred             HHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh-Cc
Confidence            99999999999999999999999999999999986432        2334566777889999999999999999999 67


Q ss_pred             CCCCccccEEEecCCcc
Q 024338          252 AAGYITGQVLTIDGGMV  268 (269)
Q Consensus       252 ~~~~~~G~~i~~dgg~~  268 (269)
                      +++|+|||+|.||||++
T Consensus       239 ~s~~itG~~i~VDGG~s  255 (258)
T d1iy8a_         239 DASYVNATVVPIDGGQS  255 (258)
T ss_dssp             GGTTCCSCEEEESTTTT
T ss_pred             hhcCCcCceEEcCcchh
Confidence            88999999999999986

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=1.7e-56  Score=371.28  Aligned_cols=244  Identities=32%  Similarity=0.473  Sum_probs=210.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      ++|+||++|||||++|||+++|+.|+++|++|++. +|++++  +..+.+++.+.++.++.+|++|+++++++++++.++
T Consensus         1 qrL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~-~~~~~~--~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~   77 (247)
T d2ew8a1           1 QRLKDKLAVITGGANGIGRAIAERFAVEGADIAIA-DLVPAP--EAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVIST   77 (247)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ESSCCH--HHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEE-ECCchH--HHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            36899999999999999999999999999999985 555432  233445566788999999999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKA  181 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  181 (269)
                      +|+||+||||||+....++.+.+.++|++.+++|+.++++++|+++|.|++++.|+||++||..+..+.|+...|++||+
T Consensus        78 ~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKa  157 (247)
T d2ew8a1          78 FGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKA  157 (247)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCcccccchhhhc
Confidence            99999999999999889999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHH-HHHH-HhcCCCCCCCCHHHHHHHHHHhccCCCCCCcccc
Q 024338          182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDL-EKKI-LEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQ  259 (269)
Q Consensus       182 al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~  259 (269)
                      |+.+|+++++.|++++|||||+|+||+++|++.+...... .+.. ....|++++.+|+|+|++++||+ +++++|+|||
T Consensus       158 al~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~l~r~~~pedvA~~v~fL~-S~~s~~itG~  236 (247)
T d2ew8a1         158 ANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLA-SDDASFITGQ  236 (247)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCC------------------CTTSSSCSCCCTHHHHHHHHHHT-SGGGTTCCSC
T ss_pred             cHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccchhHHHHHHHhccCCCCCCHHHHHHHHHHHh-CchhcCCcCC
Confidence            9999999999999999999999999999999876543322 2222 22357889999999999999999 6788999999


Q ss_pred             EEEecCCccC
Q 024338          260 VLTIDGGMVM  269 (269)
Q Consensus       260 ~i~~dgg~~~  269 (269)
                      +|.||||+++
T Consensus       237 ~i~vDGG~~~  246 (247)
T d2ew8a1         237 TLAVDGGMVR  246 (247)
T ss_dssp             EEEESSSCCC
T ss_pred             eEEECCCEec
Confidence            9999999975

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=1e-56  Score=375.03  Aligned_cols=241  Identities=40%  Similarity=0.648  Sum_probs=225.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTV  105 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i  105 (269)
                      ||++|||||++|||+++|+.|+++|++|++ .+|+++.++++.+++++.+.++.++++|++|+++++++++++.+++|+|
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i-~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~i   80 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFV-CARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPV   80 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            899999999999999999999999999988 5899999999999999888899999999999999999999999999999


Q ss_pred             cEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHH--HHhCCCCeEEEEcCCccccCCCCChhhHHhHHHH
Q 024338          106 DILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKI--MMKKKKGRIINIASVVGLVGNIGQANYSAAKAGV  183 (269)
Q Consensus       106 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al  183 (269)
                      |+||||||+....++.+.+.++|++.+++|+.++++++|+++|+  |.+++.++||+++|..+..+.|+...|++||+|+
T Consensus        81 DilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~~~~Y~asKaal  160 (257)
T d2rhca1          81 DVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGV  160 (257)
T ss_dssp             SEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred             CEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccccchhHHHHHHHH
Confidence            99999999988899999999999999999999999999999997  5567779999999999999999999999999999


Q ss_pred             HHHHHHHHHHhccCCeEEEEEecCCccCCccccc-----------ChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCC
Q 024338          184 IGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL-----------GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPA  252 (269)
Q Consensus       184 ~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~  252 (269)
                      .+|+++||.|++++|||||+|+||+++||+.+..           .++..+...+..|++++.+|+|+|++++||+ +++
T Consensus       161 ~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~PlgR~~~pedia~~v~fL~-S~~  239 (257)
T d2rhca1         161 VGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLI-GPG  239 (257)
T ss_dssp             HHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHT-SGG
T ss_pred             HHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh-Cch
Confidence            9999999999999999999999999999986433           2345566778899999999999999999999 678


Q ss_pred             CCCccccEEEecCCcc
Q 024338          253 AGYITGQVLTIDGGMV  268 (269)
Q Consensus       253 ~~~~~G~~i~~dgg~~  268 (269)
                      ++|+|||+|.||||+.
T Consensus       240 s~~itG~~i~vDGG~~  255 (257)
T d2rhca1         240 AAAVTAQALNVCGGLG  255 (257)
T ss_dssp             GTTCCSCEEEESTTCC
T ss_pred             hcCCcCceEEECcCcc
Confidence            8999999999999985

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=2.1e-56  Score=372.74  Aligned_cols=243  Identities=32%  Similarity=0.573  Sum_probs=223.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      |+|+||++|||||++|||+++|+.|+++|++|++ .+|+.+.++++.+++   +.++..+.+|++|+++++++++++.++
T Consensus         1 M~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~-~~r~~~~l~~~~~~~---~~~~~~~~~Dvt~~~~v~~~~~~~~~~   76 (256)
T d1k2wa_           1 MRLDGKTALITGSARGIGRAFAEAYVREGARVAI-ADINLEAARATAAEI---GPAACAIALDVTDQASIDRCVAELLDR   76 (256)
T ss_dssp             CTTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEE-EESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHh---CCceEEEEeeCCCHHHHHHHHHHHHHH
Confidence            5689999999999999999999999999999988 589998888888776   678899999999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-CCCCeEEEEcCCccccCCCCChhhHHhH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMK-KKKGRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                      +|+||+||||||+....++.+.+.++|++.+++|+.+++.++|+++|.|.+ ++.|+||++||..+..+.++...|++||
T Consensus        77 ~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asK  156 (256)
T d1k2wa_          77 WGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATK  156 (256)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             hCCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccccccchhhhh
Confidence            999999999999988889999999999999999999999999999997655 4579999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC-----------hHHHHHHHhcCCCCCCCCHHHHHHHHHHhcc
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG-----------EDLEKKILEKIPLGRYGQPEEVAGLVEFLAL  249 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~  249 (269)
                      +|+.+|+++++.|++++|||||+|+||+++|++.....           ++..+......|++++.+|+|+|++++||+ 
T Consensus       157 aal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~p~evA~~v~fL~-  235 (256)
T d1k2wa_         157 AAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIFLA-  235 (256)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCHHHHHHHHHHTT-
T ss_pred             hHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh-
Confidence            99999999999999999999999999999999865332           234456677899999999999999999999 


Q ss_pred             CCCCCCccccEEEecCCccC
Q 024338          250 NPAAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       250 ~~~~~~~~G~~i~~dgg~~~  269 (269)
                      +++++|+|||+|.||||++|
T Consensus       236 S~~a~~iTG~~i~vDGG~~m  255 (256)
T d1k2wa_         236 TPEADYIVAQTYNVDGGNWM  255 (256)
T ss_dssp             SGGGTTCCSCEEEESTTSSC
T ss_pred             CchhCCccCceEEECcchhh
Confidence            67889999999999999876

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=6.1e-57  Score=376.37  Aligned_cols=246  Identities=33%  Similarity=0.519  Sum_probs=198.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      .+|+||++|||||++|||+++|+.|+++|++|++ ++|+++.+++..+++...+.++..+.||++++++++++++++.++
T Consensus         4 F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~-~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (259)
T d1xq1a_           4 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHT-CARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSM   82 (259)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHH
Confidence            4679999999999999999999999999999888 589999999999999888889999999999999999999999999


Q ss_pred             c-CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhH
Q 024338          102 W-GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       102 ~-~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                      + +++|+||||||.....++.+.+.++|++.+++|+.+++.++|+++|.|++++.|+||++||..+..+.++...|++||
T Consensus        83 ~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asK  162 (259)
T d1xq1a_          83 FGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATK  162 (259)
T ss_dssp             HTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHHHH
T ss_pred             hCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccccccccccccccccc
Confidence            8 689999999999888899999999999999999999999999999999998999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC-hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCcccc
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG-EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQ  259 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~  259 (269)
                      +|+.+|++++|.|++++|||||+|+||+++||+..... ++..+...+..|++++.+|+|+|++++||+ +++++|+|||
T Consensus       163 aal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~-S~~s~~iTG~  241 (259)
T d1xq1a_         163 GALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAFLC-MPAASYITGQ  241 (259)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEECCSCC-------------------------CCGGGGHHHHHHHT-SGGGTTCCSC
T ss_pred             cchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhchHHHHHHHHhCCCCCCCcCHHHHHHHHHHHh-CchhcCCcCc
Confidence            99999999999999999999999999999999886643 344556677889999999999999999999 6788999999


Q ss_pred             EEEecCCccC
Q 024338          260 VLTIDGGMVM  269 (269)
Q Consensus       260 ~i~~dgg~~~  269 (269)
                      +|.||||+++
T Consensus       242 ~i~vDGG~s~  251 (259)
T d1xq1a_         242 TICVDGGLTV  251 (259)
T ss_dssp             EEECCCCEEE
T ss_pred             EEEeCCCEEC
Confidence            9999999863

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=3e-57  Score=376.70  Aligned_cols=242  Identities=33%  Similarity=0.528  Sum_probs=223.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      +|+||++|||||++|||+++|+.|+++|++|++ ++|++++++++.+++   +.++.++++|++|+++++++++++.+++
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~-~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   77 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVL-ADVLDEEGAATAREL---GDAARYQHLDVTIEEDWQRVVAYAREEF   77 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHh---CCceEEEEcccCCHHHHHHHHHHHHHHc
Confidence            689999999999999999999999999999888 588888887776665   5678999999999999999999999999


Q ss_pred             CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHH
Q 024338          103 GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAG  182 (269)
Q Consensus       103 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  182 (269)
                      |++|+||||||+....++.+.+.++|++.+++|+.+++.++|+++|.|++++.|+||++||..+..+.++...|++||+|
T Consensus        78 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaa  157 (254)
T d1hdca_          78 GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWG  157 (254)
T ss_dssp             SCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccccchhhHHHHHHH
Confidence            99999999999988899999999999999999999999999999999999899999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCC-CHHHHHHHHHHhccCCCCCCccccEE
Q 024338          183 VIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYG-QPEEVAGLVEFLALNPAAGYITGQVL  261 (269)
Q Consensus       183 l~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~a~~~~~l~~~~~~~~~~G~~i  261 (269)
                      +.+|+++|+.|++++|||||+|+||+++|++......+..+......|++++. .|+|+|++++||+ +++++|+|||+|
T Consensus       158 l~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~g~~PedvA~~v~fL~-S~~a~~itG~~i  236 (254)
T d1hdca_         158 VRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLL-SDTSSYVTGAEL  236 (254)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCSTTSCTTSTTSSCB-CHHHHHHHHHHHH-SGGGTTCCSCEE
T ss_pred             HHHHHHHHHHHhCCCceEEEEeeeCcccCccchhcCHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHh-chhhCCCCCceE
Confidence            99999999999999999999999999999987655444444555678899986 6999999999999 678899999999


Q ss_pred             EecCCccC
Q 024338          262 TIDGGMVM  269 (269)
Q Consensus       262 ~~dgg~~~  269 (269)
                      .+||||++
T Consensus       237 ~vDGG~t~  244 (254)
T d1hdca_         237 AVDGGWTT  244 (254)
T ss_dssp             EESTTTTT
T ss_pred             EeCCCccC
Confidence            99999974

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=3e-56  Score=368.55  Aligned_cols=236  Identities=36%  Similarity=0.572  Sum_probs=220.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      .|+||++|||||++|||+++|+.|+++|++|++ .+|++++++++.+++   +.+..++.+|++|+++++++++++.+++
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~~-~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   78 (244)
T d1nffa_           3 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVF-GDILDEEGKAMAAEL---ADAARYVHLDVTQPAQWKAAVDTAVTAF   78 (244)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHT---GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHh---hCcceEEEeecCCHHHHHHHHHHHHHHh
Confidence            588999999999999999999999999999888 589998888888776   3578889999999999999999999999


Q ss_pred             CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHH
Q 024338          103 GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAG  182 (269)
Q Consensus       103 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  182 (269)
                      +++|+||||||.....++.+.+.++|++.+++|+.+++.++|.++|.|.+++.|+||++||..+..+.++...|++||++
T Consensus        79 g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaa  158 (244)
T d1nffa_          79 GGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFA  158 (244)
T ss_dssp             SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred             CCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccccccccchhhHHHH
Confidence            99999999999988899999999999999999999999999999999999899999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEEE
Q 024338          183 VIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLT  262 (269)
Q Consensus       183 l~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~  262 (269)
                      +++|+++++.|++++|||||+|+||+++||+.+...++     ..+.|++++.+|+|+|++++||+ +++++|+|||+|.
T Consensus       159 l~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~-----~~~~pl~R~~~p~diA~~v~fL~-s~~s~~itG~~i~  232 (244)
T d1nffa_         159 VRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPED-----IFQTALGRAAEPVEVSNLVVYLA-SDESSYSTGAEFV  232 (244)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTT-----CSCCSSSSCBCHHHHHHHHHHHH-SGGGTTCCSCEEE
T ss_pred             HHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhHH-----HHhccccCCCCHHHHHHHHHHHh-ChhhCCCcCCEEE
Confidence            99999999999999999999999999999987655433     34578999999999999999999 6788999999999


Q ss_pred             ecCCcc
Q 024338          263 IDGGMV  268 (269)
Q Consensus       263 ~dgg~~  268 (269)
                      ||||++
T Consensus       233 vDGG~~  238 (244)
T d1nffa_         233 VDGGTV  238 (244)
T ss_dssp             ESTTGG
T ss_pred             ECCCee
Confidence            999986

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=8.2e-56  Score=369.09  Aligned_cols=242  Identities=38%  Similarity=0.569  Sum_probs=224.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTV  105 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i  105 (269)
                      .|++|||||++|||+++|+.|+++|++|++ .+|+++.++++.+++++.+.++.++.||++|+++++++++++.+++|+|
T Consensus         1 KKValITGas~GIG~aia~~la~~Ga~V~~-~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   79 (255)
T d1gega_           1 KKVALVTGAGQGIGKAIALRLVKDGFAVAI-ADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGF   79 (255)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCC
T ss_pred             CCEEEEcCCccHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCc
Confidence            388999999999999999999999999988 5899999999999999888899999999999999999999999999999


Q ss_pred             cEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCCeEEEEcCCccccCCCCChhhHHhHHHHH
Q 024338          106 DILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKK-KKGRIINIASVVGLVGNIGQANYSAAKAGVI  184 (269)
Q Consensus       106 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~  184 (269)
                      |+||||||+....++.+.+.++|++.+++|+.++++++|+++|+|.++ +.++|+++||..+..+.|+...|++||+|+.
T Consensus        80 DilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~  159 (255)
T d1gega_          80 DVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVR  159 (255)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred             cEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCcccccchhCHHHHH
Confidence            999999999888999999999999999999999999999999987655 4678999999999999999999999999999


Q ss_pred             HHHHHHHHHhccCCeEEEEEecCCccCCcccccCh-----------HHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCC
Q 024338          185 GLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGE-----------DLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAA  253 (269)
Q Consensus       185 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~  253 (269)
                      +|+++++.|+++.|||||+|+||+++||+.....+           ...+...+..|++|+.+|+|+|++++||+ ++++
T Consensus       160 ~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL~-S~~a  238 (255)
T d1gega_         160 GLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLA-SPDS  238 (255)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHHH-SGGG
T ss_pred             hhHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCCCCCCcCHHHHHHHHHHHh-Cchh
Confidence            99999999999999999999999999998654322           23455677899999999999999999999 6788


Q ss_pred             CCccccEEEecCCccC
Q 024338          254 GYITGQVLTIDGGMVM  269 (269)
Q Consensus       254 ~~~~G~~i~~dgg~~~  269 (269)
                      +|+|||+|.+|||++|
T Consensus       239 ~~itG~~i~vDGG~~~  254 (255)
T d1gega_         239 DYMTGQSLLIDGGMVF  254 (255)
T ss_dssp             TTCCSCEEEESSSSSC
T ss_pred             CCccCcEEEecCCEEe
Confidence            9999999999999986

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=2.9e-56  Score=372.68  Aligned_cols=243  Identities=30%  Similarity=0.525  Sum_probs=226.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      +.|+||++|||||++|||+++|+.|+++|++|++ ++|+++.++++.+++++.+.++..+.||++|+++++++++++.++
T Consensus         1 krL~gK~alITGas~GIG~aia~~la~~Ga~V~~-~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (260)
T d1zema1           1 KKFNGKVCLVTGAGGNIGLATALRLAEEGTAIAL-LDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRD   79 (260)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999888 589999999999999988889999999999999999999999999


Q ss_pred             cCCccEEEEccCCCCC-CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhH
Q 024338          102 WGTVDILINNAGITRD-TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       102 ~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                      +|++|+||||||.... .++.+.+.++|++.+++|+.++++++++++|.|.+++.|+||++||..+..+.|+...|++||
T Consensus        80 ~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asK  159 (260)
T d1zema1          80 FGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSK  159 (260)
T ss_dssp             HSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHH
T ss_pred             hCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCcchHHHHHHH
Confidence            9999999999998754 789999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc----------------ChHHHHHHHhcCCCCCCCCHHHHHHHH
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL----------------GEDLEKKILEKIPLGRYGQPEEVAGLV  244 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~a~~~  244 (269)
                      +|+.+|+++++.|++++|||||+|+||+++|++....                .+...+......|++++.+|+|+|+++
T Consensus       160 aal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedvA~~v  239 (260)
T d1zema1         160 GAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVV  239 (260)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGGGSHHHH
T ss_pred             HHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            9999999999999999999999999999999975321                133456667789999999999999999


Q ss_pred             HHhccCCCCCCccccEEEecCC
Q 024338          245 EFLALNPAAGYITGQVLTIDGG  266 (269)
Q Consensus       245 ~~l~~~~~~~~~~G~~i~~dgg  266 (269)
                      +||+ +++++|+|||+|.||||
T Consensus       240 ~fL~-S~~s~~itG~~i~VDGG  260 (260)
T d1zema1         240 AFLL-GDDSSFMTGVNLPIAGG  260 (260)
T ss_dssp             HHHH-SGGGTTCCSCEEEESCC
T ss_pred             HHHh-CchhcCccCCeEEeCCC
Confidence            9999 67889999999999998

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=2.2e-56  Score=368.18  Aligned_cols=235  Identities=42%  Similarity=0.668  Sum_probs=211.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      ++|+||++|||||++|||+++|+.|+++|++|+++ +|+.+..           .++..+++|++|+++++++++++.++
T Consensus         3 psl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~-~r~~~~~-----------~~~~~~~~Dv~~~~~v~~~~~~~~~~   70 (237)
T d1uzma1           3 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVT-HRGSGAP-----------KGLFGVEVDVTDSDAVDRAFTAVEEH   70 (237)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEE-ESSSCCC-----------TTSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEE-ECCcchh-----------cCceEEEEecCCHHHHHHHHHHHHHh
Confidence            57899999999999999999999999999999985 6765432           34567999999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKA  181 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  181 (269)
                      +++||+||||||+....++.+.+.++|++.+++|+.+++.++|.++|.|.+++.|+||++||..+..+.++...|++||+
T Consensus        71 ~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKa  150 (237)
T d1uzma1          71 QGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKA  150 (237)
T ss_dssp             HSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHHH
T ss_pred             cCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCcccHHHHHHHH
Confidence            99999999999998888999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEE
Q 024338          182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL  261 (269)
Q Consensus       182 al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i  261 (269)
                      |+.+|+++++.|++++|||||+|+||+++|++.+...+...+...+..|++++.+|+|+|++++||+ +++++|+|||+|
T Consensus       151 al~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~-S~~s~~itG~~i  229 (237)
T d1uzma1         151 GVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLA-SEDASYISGAVI  229 (237)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHHHHHHHGGGCTTCSCBCHHHHHHHHHHHH-SGGGTTCCSCEE
T ss_pred             HHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh-CchhcCCcCCeE
Confidence            9999999999999999999999999999999998888888888889999999999999999999999 678899999999


Q ss_pred             EecCCccC
Q 024338          262 TIDGGMVM  269 (269)
Q Consensus       262 ~~dgg~~~  269 (269)
                      .+|||+.|
T Consensus       230 ~vdGG~~m  237 (237)
T d1uzma1         230 PVDGGMGM  237 (237)
T ss_dssp             EESTTTTC
T ss_pred             EECCCCCC
Confidence            99999876

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=1.3e-55  Score=366.84  Aligned_cols=243  Identities=30%  Similarity=0.533  Sum_probs=223.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      .|+||++|||||++|||+++|+.|+++|++|++ ++|+++.++++.+++.. +.++.++.+|++|+++++++++++.+++
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~-~~r~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMI-TGRHSDVGEKAAKSVGT-PDQIQFFQHDSSDEDGWTKLFDATEKAF   80 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHhCC-CCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            589999999999999999999999999999888 58999999888888753 5688999999999999999999999999


Q ss_pred             CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCC-eEEEEcCCccccCCCCChhhHHhHH
Q 024338          103 GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKG-RIINIASVVGLVGNIGQANYSAAKA  181 (269)
Q Consensus       103 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~-~iv~isS~~~~~~~~~~~~Y~~sK~  181 (269)
                      |+||+||||||.....++.+.+.++|++.+++|+.+++.++|+++|.|++++.| +||++||..+..+.|+...|++||+
T Consensus        81 G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~~~~Y~asKa  160 (251)
T d1zk4a1          81 GPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKG  160 (251)
T ss_dssp             SSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCCchhHHHHHH
Confidence            999999999999988999999999999999999999999999999999887754 8999999999999999999999999


Q ss_pred             HHHHHHHHHHHH--hccCCeEEEEEecCCccCCcccccCh-HHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccc
Q 024338          182 GVIGLTKTVAKE--YASRNINVNAIAPGFIASDMTAKLGE-DLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITG  258 (269)
Q Consensus       182 al~~~~~~la~e--~~~~gi~v~~v~pG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G  258 (269)
                      ++.+|++++|.|  +.+.|||||+|+||+++|++.+.... +.........|++++.+|+|+|++++||+ +++++|+||
T Consensus       161 al~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~-S~~s~~itG  239 (251)
T d1zk4a1         161 AVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLA-SNESKFATG  239 (251)
T ss_dssp             HHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHTSTTTCTTSSCBCHHHHHHHHHHHH-SGGGTTCCS
T ss_pred             HHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHh-CchhCCCcC
Confidence            999999999998  56889999999999999998876543 33344456789999999999999999999 678899999


Q ss_pred             cEEEecCCcc
Q 024338          259 QVLTIDGGMV  268 (269)
Q Consensus       259 ~~i~~dgg~~  268 (269)
                      |+|.||||++
T Consensus       240 ~~i~vDGG~t  249 (251)
T d1zk4a1         240 SEFVVDGGYT  249 (251)
T ss_dssp             CEEEESTTGG
T ss_pred             cEEEECcccc
Confidence            9999999986

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.5e-55  Score=365.45  Aligned_cols=238  Identities=36%  Similarity=0.542  Sum_probs=214.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      .|+||++|||||++|||+++|+.|+++|++|+++ +|+++.. +..+++     ...++++|++|.++++++++++.+++
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~-~~~~~~~-~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~   74 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALC-DLRPEGK-EVAEAI-----GGAFFQVDLEDERERVRFVEEAAYAL   74 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ESSTTHH-HHHHHH-----TCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEE-ECCHHHH-HHHHHc-----CCeEEEEeCCCHHHHHHHHHHHHHhc
Confidence            4789999999999999999999999999999884 6776543 344443     23468999999999999999999999


Q ss_pred             CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHH
Q 024338          103 GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAG  182 (269)
Q Consensus       103 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  182 (269)
                      |+||+||||||+....++.+.+.++|++.+++|+.++++++|+++|+|++++.|+||++||..+..+.++...|++||+|
T Consensus        75 G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaa  154 (248)
T d2d1ya1          75 GRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGG  154 (248)
T ss_dssp             SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHHH
T ss_pred             CCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccccccchhHHHHHH
Confidence            99999999999988899999999999999999999999999999999999899999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhccCCeEEEEEecCCccCCccccc------ChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCc
Q 024338          183 VIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL------GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYI  256 (269)
Q Consensus       183 l~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~  256 (269)
                      +.+|+++++.|++++|||||+|+||+++||+....      .++..+...+..|++++.+|+|+|+++.||+ +++++|+
T Consensus       155 l~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v~fL~-S~~s~~i  233 (248)
T d2d1ya1         155 LVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLA-SEKASFI  233 (248)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHH-SGGGTTC
T ss_pred             HHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh-CchhcCC
Confidence            99999999999999999999999999999975432      2234456677889999999999999999999 6788999


Q ss_pred             cccEEEecCCcc
Q 024338          257 TGQVLTIDGGMV  268 (269)
Q Consensus       257 ~G~~i~~dgg~~  268 (269)
                      |||+|.+|||++
T Consensus       234 tG~~i~vDGG~t  245 (248)
T d2d1ya1         234 TGAILPVDGGMT  245 (248)
T ss_dssp             CSCEEEESTTGG
T ss_pred             CCcEEEcCcCcc
Confidence            999999999986

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-55  Score=364.46  Aligned_cols=239  Identities=30%  Similarity=0.489  Sum_probs=216.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      +|+||++|||||++|||+++|+.|+++|++|++ .+|+++.++++.+++    .+..++.||++|+++++++++++.+++
T Consensus         3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i-~~r~~~~~~~~~~~~----~~~~~~~~Dvs~~~~v~~~~~~~~~~~   77 (250)
T d1ydea1           3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVI-CDKDESGGRALEQEL----PGAVFILCDVTQEDDVKTLVSETIRRF   77 (250)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHC----TTEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHhc----CCCeEEEccCCCHHHHHHHHHHHHHhc
Confidence            689999999999999999999999999999988 589988887776665    467889999999999999999999999


Q ss_pred             CCccEEEEccCCCC-CCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHH
Q 024338          103 GTVDILINNAGITR-DTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKA  181 (269)
Q Consensus       103 ~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  181 (269)
                      ++||+||||||... ..++.+.+.++|++.+++|+.+++.++|+++|+|+++ +|+||++||..+..+.++...|++||+
T Consensus        78 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~-~G~Ii~isS~~~~~~~~~~~~Y~asKa  156 (250)
T d1ydea1          78 GRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIGQAQAVPYVATKG  156 (250)
T ss_dssp             SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHHCCTTCHHHHHHHH
T ss_pred             CCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhC-CCCCcccccccccccccCcchhHHHHh
Confidence            99999999999764 4678899999999999999999999999999999754 589999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc------ChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCC
Q 024338          182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL------GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGY  255 (269)
Q Consensus       182 al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~  255 (269)
                      |+.+|++++|.|++++|||||+|+||+++||+.+..      .....+......|++++.+|+|+|++++||++ + ++|
T Consensus       157 al~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eva~~v~fL~S-d-a~~  234 (250)
T d1ydea1         157 AVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLAS-E-ANF  234 (250)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHH-H-CTT
T ss_pred             hHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhC-c-cCC
Confidence            999999999999999999999999999999986432      12344556667899999999999999999994 4 689


Q ss_pred             ccccEEEecCCccC
Q 024338          256 ITGQVLTIDGGMVM  269 (269)
Q Consensus       256 ~~G~~i~~dgg~~~  269 (269)
                      +|||+|.+|||++|
T Consensus       235 itG~~i~vDGG~~l  248 (250)
T d1ydea1         235 CTGIELLVTGGAEL  248 (250)
T ss_dssp             CCSCEEEESTTTTS
T ss_pred             CcCCeEEECCCccc
Confidence            99999999999975

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=100.00  E-value=2.6e-54  Score=360.21  Aligned_cols=245  Identities=29%  Similarity=0.504  Sum_probs=226.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      .+|+||++|||||++|||+++|++|+++|++|++ .+|++++++++.+++++.+.+..++.+|+++.++++++++++.++
T Consensus         2 f~L~gK~alITGas~GIG~aia~~la~~G~~V~i-~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~   80 (258)
T d1ae1a_           2 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYT-CSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHV   80 (258)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHH
Confidence            3689999999999999999999999999999988 589999999999999998889999999999999999999999999


Q ss_pred             c-CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhH
Q 024338          102 W-GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       102 ~-~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                      + +++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||..+..+.|+...|+++|
T Consensus        81 ~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK  160 (258)
T d1ae1a_          81 FDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASK  160 (258)
T ss_dssp             TTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             hCCCcEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccccccchhHHHHH
Confidence            9 589999999999988999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc------ChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCC
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL------GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAG  254 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~  254 (269)
                      +|+++|++.++.|++++|||||+|+||+++||+....      ..+..+...+..|++++.+|+|+|+++.||+ +++++
T Consensus       161 ~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plgR~~~pediA~~v~fL~-S~~s~  239 (258)
T d1ae1a_         161 GAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLC-FPAAS  239 (258)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHHHHHHHHHHHH-SGGGT
T ss_pred             HHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh-ChhhC
Confidence            9999999999999999999999999999999986544      3456677788899999999999999999999 67889


Q ss_pred             CccccEEEecCCcc
Q 024338          255 YITGQVLTIDGGMV  268 (269)
Q Consensus       255 ~~~G~~i~~dgg~~  268 (269)
                      ++|||+|.||||++
T Consensus       240 ~itG~~i~vDGG~s  253 (258)
T d1ae1a_         240 YITGQIIWADGGFT  253 (258)
T ss_dssp             TCCSCEEEESTTGG
T ss_pred             CCcCcEEEeCCCee
Confidence            99999999999986

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=100.00  E-value=1.2e-54  Score=362.98  Aligned_cols=248  Identities=32%  Similarity=0.500  Sum_probs=226.1

Q ss_pred             ccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHH-cCCcEEEEEccCCCHHHHHHHHHHH
Q 024338           20 AAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEA-SGGQALTFGGDVSKEADVESMIKTA   98 (269)
Q Consensus        20 ~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dls~~~~~~~~~~~~   98 (269)
                      +.|+|+||++|||||++|||+++|+.|+++|++|++ ++|+.+.+++..+++.+ .+.++.++.||++|+++++++++++
T Consensus         3 ~~m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i-~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~   81 (260)
T d1h5qa_           3 FTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAV-IYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQI   81 (260)
T ss_dssp             EEECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEE-EESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CcccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHH
Confidence            457899999999999999999999999999999988 57887777777777644 4778999999999999999999999


Q ss_pred             HHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-CCCCeEEEEcCCcccc-------CC
Q 024338           99 VDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMK-KKKGRIINIASVVGLV-------GN  170 (269)
Q Consensus        99 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~iv~isS~~~~~-------~~  170 (269)
                      .++++++|+||||||+....++.+.+.++|++.+++|+.+++.+++.+.|.|.+ +..++|++++|.....       +.
T Consensus        82 ~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~~~~  161 (260)
T d1h5qa_          82 DADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGS  161 (260)
T ss_dssp             HHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEE
T ss_pred             HHHhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccccccC
Confidence            999999999999999988899999999999999999999999999999999854 5667788887766553       34


Q ss_pred             CCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccC
Q 024338          171 IGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALN  250 (269)
Q Consensus       171 ~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~  250 (269)
                      ++...|++||+|+.+|+++++.|++++|||||+|+||+++|++.....++..+...+.+|++++.+|+|+|++++||+ +
T Consensus       162 ~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~R~g~pedvA~~v~fL~-S  240 (260)
T d1h5qa_         162 LTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASNIPLNRFAQPEEMTGQAILLL-S  240 (260)
T ss_dssp             CSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHH-S
T ss_pred             ccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh-c
Confidence            678899999999999999999999999999999999999999998888888888899999999999999999999999 6


Q ss_pred             CCCCCccccEEEecCCccC
Q 024338          251 PAAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       251 ~~~~~~~G~~i~~dgg~~~  269 (269)
                      ++++|+|||+|.||||+++
T Consensus       241 ~~s~~itG~~i~VDGG~~~  259 (260)
T d1h5qa_         241 DHATYMTGGEYFIDGGQLI  259 (260)
T ss_dssp             GGGTTCCSCEEEECTTGGG
T ss_pred             chhCCCcCceEEECCCeec
Confidence            7889999999999999975

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2.3e-54  Score=357.26  Aligned_cols=237  Identities=28%  Similarity=0.441  Sum_probs=216.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      |+|+||++|||||++|||+++|+.|+++|++|++ .+|+++.++++.+++    ..+..+.+|++|++++++++    ++
T Consensus         1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~-~~r~~~~l~~~~~~~----~~~~~~~~Dv~~~~~v~~~~----~~   71 (242)
T d1cyda_           1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVA-VTRTNSDLVSLAKEC----PGIEPVCVDLGDWDATEKAL----GG   71 (242)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHS----TTCEEEECCTTCHHHHHHHH----TT
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHhc----CCCeEEEEeCCCHHHHHHHH----HH
Confidence            6899999999999999999999999999999988 588888887777665    35778899999999887665    46


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hCCCCeEEEEcCCccccCCCCChhhHHhH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMM-KKKKGRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~-~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                      +|+||+||||||+....++.+.+.++|++.+++|+.+++.++|.+.|.|. ++.+|+||+++|..+..+.|+...|+++|
T Consensus        72 ~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asK  151 (242)
T d1cyda_          72 IGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTK  151 (242)
T ss_dssp             CCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             cCCCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCccccccchH
Confidence            79999999999998889999999999999999999999999999999765 45678999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC--hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccc
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG--EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITG  258 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G  258 (269)
                      +|+.+|+++++.|++++|||||+|+||+++|++.+...  ++..+...+..|++++.+|+|+|+++.||+ +++++|+||
T Consensus       152 aal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeva~~v~fL~-S~~s~~itG  230 (242)
T d1cyda_         152 GAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLL-SDRSASTSG  230 (242)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHH-SGGGTTCCS
T ss_pred             HHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh-CchhcCcCC
Confidence            99999999999999999999999999999999876543  556677888899999999999999999999 678899999


Q ss_pred             cEEEecCCcc
Q 024338          259 QVLTIDGGMV  268 (269)
Q Consensus       259 ~~i~~dgg~~  268 (269)
                      |+|.+||||+
T Consensus       231 ~~i~vDGG~~  240 (242)
T d1cyda_         231 GGILVDAGYL  240 (242)
T ss_dssp             SEEEESTTGG
T ss_pred             ceEEeCcchh
Confidence            9999999986

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=3.2e-54  Score=361.27  Aligned_cols=245  Identities=32%  Similarity=0.520  Sum_probs=209.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcC---CcEEEEEccCCCHHHHHHHHHHHH
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASG---GQALTFGGDVSKEADVESMIKTAV   99 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dls~~~~~~~~~~~~~   99 (269)
                      +|+||++|||||++|||+++|++|+++|++|++ ++|+++.++++.+++.+.+   .++.++.+|++|+++++++++++.
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~-~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~   80 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTI-TGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTL   80 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHH
Confidence            478999999999999999999999999999888 5899999999999998763   358999999999999999999999


Q ss_pred             HhcCCccEEEEccCCCCC----CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCc-cccCCCCCh
Q 024338          100 DAWGTVDILINNAGITRD----TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVV-GLVGNIGQA  174 (269)
Q Consensus       100 ~~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~-~~~~~~~~~  174 (269)
                      +++|+||+||||||....    .++.+.+.++|++.+++|+.+++.++|+++|.|++++ +.+|+++|.. +..+.|+..
T Consensus        81 ~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~S~~~~~~~~~~~~  159 (264)
T d1spxa_          81 GKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPDFP  159 (264)
T ss_dssp             HHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCTTSH
T ss_pred             HHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc-CcceeeeeeccccccCCCch
Confidence            999999999999998643    3456678999999999999999999999999997654 5666666654 678999999


Q ss_pred             hhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC---------hHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 024338          175 NYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG---------EDLEKKILEKIPLGRYGQPEEVAGLVE  245 (269)
Q Consensus       175 ~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~a~~~~  245 (269)
                      .|++||+|+.+|+++|+.|++++|||||+|+||+++|++.....         ....+...+..|++++.+|+|+|++++
T Consensus       160 ~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedvA~~v~  239 (264)
T d1spxa_         160 YYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIA  239 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCHHHHHHHHH
T ss_pred             hhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            99999999999999999999999999999999999999865432         123345667889999999999999999


Q ss_pred             HhccCCCCCCccccEEEecCCccC
Q 024338          246 FLALNPAAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       246 ~l~~~~~~~~~~G~~i~~dgg~~~  269 (269)
                      ||++++.++|+|||+|.||||++|
T Consensus       240 fL~S~~~s~~itG~~i~vDGG~sl  263 (264)
T d1spxa_         240 FLADRKTSSYIIGHQLVVDGGSSL  263 (264)
T ss_dssp             HHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             HHhCCcccCCccCceEEeCCChhh
Confidence            999655688999999999999975

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1.7e-54  Score=364.40  Aligned_cols=247  Identities=28%  Similarity=0.439  Sum_probs=215.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcC---CcEEEEEccCCCHHHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASG---GQALTFGGDVSKEADVESMIKTA   98 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dls~~~~~~~~~~~~   98 (269)
                      ++|+||++|||||++|||+++|+.|+++|++|++ ++|+++.++++.+++.+.+   .++..+.||++|+++++++++++
T Consensus         1 prL~gK~alVTGas~GIG~aia~~la~~Ga~V~l-~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~   79 (272)
T d1xkqa_           1 PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTI-TGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINST   79 (272)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHH
Confidence            4689999999999999999999999999999888 5899999999999997753   46899999999999999999999


Q ss_pred             HHhcCCccEEEEccCCCCCCcc----cCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCCh
Q 024338           99 VDAWGTVDILINNAGITRDTLL----MRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQA  174 (269)
Q Consensus        99 ~~~~~~id~li~~ag~~~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~  174 (269)
                      .+++|+||+||||||.....++    .+.+.++|++.+++|+.+++.++|+++|.|++++++.|+++||.++..+.++..
T Consensus        80 ~~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~~~~~~~  159 (272)
T d1xkqa_          80 LKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFL  159 (272)
T ss_dssp             HHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCCSSH
T ss_pred             HHHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccccCCCCcc
Confidence            9999999999999998765443    467788999999999999999999999999876544444455567799999999


Q ss_pred             hhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC--h-------HHHHHHHhcCCCCCCCCHHHHHHHHH
Q 024338          175 NYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG--E-------DLEKKILEKIPLGRYGQPEEVAGLVE  245 (269)
Q Consensus       175 ~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~--~-------~~~~~~~~~~~~~~~~~~~~~a~~~~  245 (269)
                      .|++||+|+.+|+++||.|++++|||||+|+||+++|++.....  +       +......+..|++++.+|+|+|++++
T Consensus       160 ~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~pediA~~v~  239 (272)
T d1xkqa_         160 YYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIIL  239 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHH
T ss_pred             hhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCCCCCcCHHHHHHHHH
Confidence            99999999999999999999999999999999999999875432  1       11223345679999999999999999


Q ss_pred             HhccCCCCCCccccEEEecCCccC
Q 024338          246 FLALNPAAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       246 ~l~~~~~~~~~~G~~i~~dgg~~~  269 (269)
                      ||++++.+.|+|||+|.||||++|
T Consensus       240 fL~S~~as~~iTG~~i~vDGG~~l  263 (272)
T d1xkqa_         240 FLADRNLSFYILGQSIVADGGTSL  263 (272)
T ss_dssp             HHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             HHhCcchhCCccCeEEEeCcCHHH
Confidence            999544457899999999999975

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5e-54  Score=355.78  Aligned_cols=238  Identities=26%  Similarity=0.424  Sum_probs=216.2

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      .+.|+||++|||||++|||+++|+.|+++|++|++ .+|+++.++++.+++    ..+..+.+|++|++++++++    +
T Consensus         2 ~~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~-~~r~~~~l~~~~~~~----~~~~~~~~Dv~d~~~v~~~~----~   72 (244)
T d1pr9a_           2 ELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVA-VSRTQADLDSLVREC----PGIEPVCVDLGDWEATERAL----G   72 (244)
T ss_dssp             CCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHS----TTCEEEECCTTCHHHHHHHH----T
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEE-EECCHHHHHHHHHhc----CCCeEEEEeCCCHHHHHHHH----H
Confidence            46789999999999999999999999999999988 589998888777765    35678899999999887765    4


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hCCCCeEEEEcCCccccCCCCChhhHHh
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMM-KKKKGRIINIASVVGLVGNIGQANYSAA  179 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~-~~~~~~iv~isS~~~~~~~~~~~~Y~~s  179 (269)
                      ++++||+||||||.....++.+.+.++|++.+++|+.+++.+++.++|.|. +++.|+||++||..+..+.|+...|++|
T Consensus        73 ~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~as  152 (244)
T d1pr9a_          73 SVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCST  152 (244)
T ss_dssp             TCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             HhCCceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccchhhhhhh
Confidence            679999999999998889999999999999999999999999999999654 5678999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC--hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCcc
Q 024338          180 KAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG--EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYIT  257 (269)
Q Consensus       180 K~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~  257 (269)
                      |+|+.+|++++|.|++++|||||+|+||+++|++.+...  ....+...+..|++++.+|+|+|+++.||+ +++++|+|
T Consensus       153 Kaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL~-S~~a~~it  231 (244)
T d1pr9a_         153 KGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLL-SDRSGMTT  231 (244)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCTTCSCBCHHHHHHHHHHHH-SGGGTTCC
T ss_pred             HHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHh-CchhCCcC
Confidence            999999999999999999999999999999999876543  345566778899999999999999999999 67889999


Q ss_pred             ccEEEecCCcc
Q 024338          258 GQVLTIDGGMV  268 (269)
Q Consensus       258 G~~i~~dgg~~  268 (269)
                      ||+|.+||||+
T Consensus       232 G~~i~vDGG~~  242 (244)
T d1pr9a_         232 GSTLPVEGGFW  242 (244)
T ss_dssp             SCEEEESTTGG
T ss_pred             CcEEEECccHh
Confidence            99999999996

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=3.4e-54  Score=362.73  Aligned_cols=246  Identities=29%  Similarity=0.468  Sum_probs=220.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcC---CcEEEEEccCCCHHHHHHHHHHHH
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASG---GQALTFGGDVSKEADVESMIKTAV   99 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dls~~~~~~~~~~~~~   99 (269)
                      +|+||++|||||++|||+++|+.|+++|++|++ .+|+++.++++.+++.+.+   .++..+.+|++|+++++++++++.
T Consensus         1 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~-~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   79 (274)
T d1xhla_           1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTI-TGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTL   79 (274)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHH
Confidence            478999999999999999999999999999988 5899999999999998764   368999999999999999999999


Q ss_pred             HhcCCccEEEEccCCCCC--CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhH
Q 024338          100 DAWGTVDILINNAGITRD--TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYS  177 (269)
Q Consensus       100 ~~~~~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~  177 (269)
                      +++|+||++|||||....  ....+.+.++|++.+++|+.+++.++|+++|.|.+++.++|+++||..+..+.++...|+
T Consensus        80 ~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~~~~~Y~  159 (274)
T d1xhla_          80 AKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYA  159 (274)
T ss_dssp             HHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTTSHHHH
T ss_pred             HHcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCCCCceeh
Confidence            999999999999997544  345667889999999999999999999999999998899999999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC--h-------HHHHHHHhcCCCCCCCCHHHHHHHHHHhc
Q 024338          178 AAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG--E-------DLEKKILEKIPLGRYGQPEEVAGLVEFLA  248 (269)
Q Consensus       178 ~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~--~-------~~~~~~~~~~~~~~~~~~~~~a~~~~~l~  248 (269)
                      +||+|+.+|++++|.|++++|||||+|+||+++||+.....  +       +..+...+.+|++++.+|+|+|++++||+
T Consensus       160 asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPlgR~g~pediA~~v~fL~  239 (274)
T d1xhla_         160 CAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLA  239 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHH
T ss_pred             hhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCCCCCcCHHHHHHHHHHHc
Confidence            99999999999999999999999999999999999865432  1       11122235579999999999999999999


Q ss_pred             cCCCCCCccccEEEecCCccC
Q 024338          249 LNPAAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       249 ~~~~~~~~~G~~i~~dgg~~~  269 (269)
                      +.+.++|+|||+|.+|||++|
T Consensus       240 S~d~s~~itG~~i~vDGG~~l  260 (274)
T d1xhla_         240 DRNLSSYIIGQSIVADGGSTL  260 (274)
T ss_dssp             CHHHHTTCCSCEEEESTTGGG
T ss_pred             CCccccCccCcEEEeCcCHHH
Confidence            545688999999999999874

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=100.00  E-value=1.8e-53  Score=357.42  Aligned_cols=243  Identities=29%  Similarity=0.498  Sum_probs=217.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      +|+||++|||||++|||+++|+.|+++|++|++ ++|+++.++++.+++.. ...+.++.||++|+++++++++++.+++
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i-~~r~~~~~~~~~~~l~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVI-ADIADDHGQKVCNNIGS-PDVISFVHCDVTKDEDVRNLVDTTIAKH   80 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHhcC-CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            689999999999999999999999999999988 58999999999988854 3457889999999999999999999999


Q ss_pred             CCccEEEEccCCCCCC--cccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCC-hhhHHh
Q 024338          103 GTVDILINNAGITRDT--LLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQ-ANYSAA  179 (269)
Q Consensus       103 ~~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~-~~Y~~s  179 (269)
                      |++|++|||||.....  .+.+.+.++|++.+++|+.+++.++|+++|.|.+++.|++|++||..+..+.++. ..|++|
T Consensus        81 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~~Y~as  160 (268)
T d2bgka1          81 GKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTAT  160 (268)
T ss_dssp             SCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHHHH
T ss_pred             CCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccccccccccccchh
Confidence            9999999999986543  4788999999999999999999999999999999999999999999999877664 589999


Q ss_pred             HHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC---hHHHHHHH--hcCCCCCCCCHHHHHHHHHHhccCCCCC
Q 024338          180 KAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG---EDLEKKIL--EKIPLGRYGQPEEVAGLVEFLALNPAAG  254 (269)
Q Consensus       180 K~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~---~~~~~~~~--~~~~~~~~~~~~~~a~~~~~l~~~~~~~  254 (269)
                      |+|+.+|++++|.|++++|||||+|+||+++||+.....   +...+...  ...|.+++.+|+|+|++++||+ +++++
T Consensus       161 Kaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~-S~~s~  239 (268)
T d2bgka1         161 KHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLA-GDESK  239 (268)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHHH-SGGGT
T ss_pred             HHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccccCCCCcCHHHHHHHHHHHh-ChhhC
Confidence            999999999999999999999999999999999876542   22222222  2347788999999999999999 67889


Q ss_pred             CccccEEEecCCcc
Q 024338          255 YITGQVLTIDGGMV  268 (269)
Q Consensus       255 ~~~G~~i~~dgg~~  268 (269)
                      |+|||+|.||||++
T Consensus       240 ~itGq~i~VDGG~t  253 (268)
T d2bgka1         240 YVSGLNLVIDGGYT  253 (268)
T ss_dssp             TCCSCEEEESTTGG
T ss_pred             CccCceEEECcCcc
Confidence            99999999999996

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=2.9e-54  Score=358.88  Aligned_cols=240  Identities=29%  Similarity=0.377  Sum_probs=215.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      +|+||++|||||++|||+++|+.|+++|++|++ .+|+++.++++.+++   +.+..++++|++|+++++++++++.+++
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~-~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~   78 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAF-SDINEAAGQQLAAEL---GERSMFVRHDVSSEADWTLVMAAVQRRL   78 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEE-ECSCHHHHHHHHHHH---CTTEEEECCCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHh---CCCeEEEEeecCCHHHHHHHHHHHHHHh
Confidence            589999999999999999999999999999888 589998888888777   5678889999999999999999999999


Q ss_pred             CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHH
Q 024338          103 GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAG  182 (269)
Q Consensus       103 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  182 (269)
                      +++|+||||||.....++.+.+.++|++.+++|+.+++.++|+++|.|++ ++|+||++||..+..+.++...|++||+|
T Consensus        79 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~-~~G~Iv~isS~~~~~~~~~~~~Y~asKaa  157 (253)
T d1hxha_          79 GTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKE-TGGSIINMASVSSWLPIEQYAGYSASKAA  157 (253)
T ss_dssp             CSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTT-TCEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred             CCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHh-cCCceecccchhhhcCccccccccchhHH
Confidence            99999999999988889999999999999999999999999999999964 56999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhccC--CeEEEEEecCCccCCcccccC-----hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCC
Q 024338          183 VIGLTKTVAKEYASR--NINVNAIAPGFIASDMTAKLG-----EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGY  255 (269)
Q Consensus       183 l~~~~~~la~e~~~~--gi~v~~v~pG~v~t~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~  255 (269)
                      +.+|+++++.|++++  |||||+|+||+++|++.+...     ++.........|++++.+|+|+|++++||+ +++++|
T Consensus       158 l~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~-S~~s~~  236 (253)
T d1hxha_         158 VSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLA-SDESSV  236 (253)
T ss_dssp             HHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHHHHHHHHHHHH-SGGGTT
T ss_pred             HHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhHHHHHhCccccccCCCCCHHHHHHHHHHHh-ChhhCC
Confidence            999999999999875  599999999999999864322     122222223346778889999999999999 678899


Q ss_pred             ccccEEEecCCcc
Q 024338          256 ITGQVLTIDGGMV  268 (269)
Q Consensus       256 ~~G~~i~~dgg~~  268 (269)
                      +|||+|.||||++
T Consensus       237 itG~~i~VDGG~~  249 (253)
T d1hxha_         237 MSGSELHADNSIL  249 (253)
T ss_dssp             CCSCEEEESSSCT
T ss_pred             CcCcEEEECccHh
Confidence            9999999999986

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.2e-53  Score=359.43  Aligned_cols=244  Identities=32%  Similarity=0.537  Sum_probs=223.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHc-----CCcEEEEEccCCCHHHHHHHHHH
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS-----GGQALTFGGDVSKEADVESMIKT   97 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~Dls~~~~~~~~~~~   97 (269)
                      .|+||++|||||++|||+++|+.|+++|++|++ .+|+.+.+++..+++...     +.++..+.||++|++++++++++
T Consensus         9 ~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi-~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~   87 (297)
T d1yxma1           9 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVI-ASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS   87 (297)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHH
Confidence            589999999999999999999999999999888 589999999999988753     56789999999999999999999


Q ss_pred             HHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhH
Q 024338           98 AVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYS  177 (269)
Q Consensus        98 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~  177 (269)
                      +.++++++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|.+++.++||++|| .+..+.|+...|+
T Consensus        88 ~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss-~~~~~~~~~~~Y~  166 (297)
T d1yxma1          88 TLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIV-PTKAGFPLAVHSG  166 (297)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECC-CCTTCCTTCHHHH
T ss_pred             HHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccc-cccccccccccch
Confidence            999999999999999998888999999999999999999999999999999999989999999866 4667789999999


Q ss_pred             HhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC----hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCC
Q 024338          178 AAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG----EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAA  253 (269)
Q Consensus       178 ~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~  253 (269)
                      +||+|+.+|++++|.|++++|||||+|+||+++|++.....    ++..+...+..|++++.+|+|+|++++||+ ++++
T Consensus       167 asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~plgR~g~pedvA~~v~fL~-Sd~s  245 (297)
T d1yxma1         167 AARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLL-SPAA  245 (297)
T ss_dssp             HHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHHHHHHHHH-SGGG
T ss_pred             hHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh-Cchh
Confidence            99999999999999999999999999999999999865432    334455667789999999999999999999 6788


Q ss_pred             CCccccEEEecCCccC
Q 024338          254 GYITGQVLTIDGGMVM  269 (269)
Q Consensus       254 ~~~~G~~i~~dgg~~~  269 (269)
                      +|+|||+|.||||++|
T Consensus       246 ~~iTG~~i~VDGG~sl  261 (297)
T d1yxma1         246 SFITGQSVDVDGGRSL  261 (297)
T ss_dssp             TTCCSCEEEESTTGGG
T ss_pred             cCcCCcEEEeCcChhh
Confidence            9999999999999864

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=7.4e-53  Score=352.05  Aligned_cols=244  Identities=33%  Similarity=0.555  Sum_probs=222.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      +.|+||++|||||++|||+++|+.|+++|++|+++.+++.+.++++.+++++.+.++.++.+|++|+++++++++++.++
T Consensus         2 ~~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~   81 (259)
T d1ja9a_           2 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH   81 (259)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHH
Confidence            56899999999999999999999999999999987788888899999999998999999999999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccc-cCCCCChhhHHhH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGL-VGNIGQANYSAAK  180 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~-~~~~~~~~Y~~sK  180 (269)
                      +++||++|||||.....++.+.+.++|++.+++|+.++++++|.++|.|++  .+++++++|..+. .+.++...|++||
T Consensus        82 ~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--~g~~iii~s~~~~~~~~~~~~~Y~asK  159 (259)
T d1ja9a_          82 FGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR--GGRIILTSSIAAVMTGIPNHALYAGSK  159 (259)
T ss_dssp             HSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE--EEEEEEECCGGGTCCSCCSCHHHHHHH
T ss_pred             cCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhc--CCcccccccccccccCCCCchhHHHHH
Confidence            999999999999988889999999999999999999999999999999953  4677777776664 4789999999999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc-------------ChHHHHHHHhcCCCCCCCCHHHHHHHHHHh
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL-------------GEDLEKKILEKIPLGRYGQPEEVAGLVEFL  247 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l  247 (269)
                      +|+.+|+++|+.|+++.|||||+|+||+++|++.+..             .++..+......|++++.+|+|+|++++||
T Consensus       160 ~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eVa~~v~fL  239 (259)
T d1ja9a_         160 AAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSAL  239 (259)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCCCCCcCHHHHHHHHHHH
Confidence            9999999999999999999999999999999875321             134456677889999999999999999999


Q ss_pred             ccCCCCCCccccEEEecCCcc
Q 024338          248 ALNPAAGYITGQVLTIDGGMV  268 (269)
Q Consensus       248 ~~~~~~~~~~G~~i~~dgg~~  268 (269)
                      + +++++|+|||+|.+|||++
T Consensus       240 ~-S~~a~~itG~~i~vDGG~~  259 (259)
T d1ja9a_         240 C-QEESEWINGQVIKLTGGGI  259 (259)
T ss_dssp             H-SGGGTTCCSCEEEESTTCC
T ss_pred             h-CchhcCCcCceEEeCCCCC
Confidence            9 6788999999999999985

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=3.2e-53  Score=352.78  Aligned_cols=234  Identities=27%  Similarity=0.346  Sum_probs=212.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCccE
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDI  107 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~  107 (269)
                      |+|||||++|||+++|+.|+++|++|++ .+|+.+.++++......      +..+|++|.++++++++++.++||+||+
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i-~~r~~~~~~~~~~~~~~------~~~~dv~~~~~~~~~~~~~~~~~G~iDi   74 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVAC-HDESFKQKDELEAFAET------YPQLKPMSEQEPAELIEAVTSAYGQVDV   74 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEE-CCGGGGSHHHHHHHHHH------CTTSEECCCCSHHHHHHHHHHHHSCCCE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHhhhCc------EEEeccCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999988 57877777666544322      3468999999999999999999999999


Q ss_pred             EEEccCCCC-CCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHHHHH
Q 024338          108 LINNAGITR-DTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGL  186 (269)
Q Consensus       108 li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~~  186 (269)
                      ||||||+.. ..++.+.+.++|++.+++|+.++++++|+++|.|++++.|+||++||..+..+.++...|++||+|+.+|
T Consensus        75 LVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~~~~~Y~asKaal~~l  154 (252)
T d1zmta1          75 LVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTL  154 (252)
T ss_dssp             EEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHHH
T ss_pred             EEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccccccccccccccccHHHH
Confidence            999999864 4789999999999999999999999999999999998999999999999999999999999999999999


Q ss_pred             HHHHHHHhccCCeEEEEEecCCccCCccccc--------ChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccc
Q 024338          187 TKTVAKEYASRNINVNAIAPGFIASDMTAKL--------GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITG  258 (269)
Q Consensus       187 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G  258 (269)
                      +++++.|++++|||||+|+||+++|++....        .++..+...+..|++|+.+|+|+|++++||+ +++++|+||
T Consensus       155 t~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~R~g~pedvA~~v~fL~-S~~s~~iTG  233 (252)
T d1zmta1         155 ANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLA-SGSCDYLTG  233 (252)
T ss_dssp             HHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHHHHHHHHHHHH-TTSCGGGTT
T ss_pred             HHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh-CchhcCCcC
Confidence            9999999999999999999999999986543        2345567788899999999999999999999 678899999


Q ss_pred             cEEEecCCccC
Q 024338          259 QVLTIDGGMVM  269 (269)
Q Consensus       259 ~~i~~dgg~~~  269 (269)
                      |+|.||||++|
T Consensus       234 ~~i~vdGG~~~  244 (252)
T d1zmta1         234 QVFWLAGGFPM  244 (252)
T ss_dssp             CEEEESTTCCC
T ss_pred             CeEEECCCcee
Confidence            99999999976

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=100.00  E-value=1.1e-52  Score=347.00  Aligned_cols=239  Identities=33%  Similarity=0.550  Sum_probs=213.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      .|+||++|||||++|||+++|+.|+++|++|++ .+|+.+.+++..+   +.+.++.++++|++++++++++++++.+++
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~-~~r~~~~~~~~~~---~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~   77 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGASLVA-VDREERLLAEAVA---ALEAEAIAVVADVSDPKAVEAVFAEALEEF   77 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHH---TCCSSEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHH---HcCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            478999999999999999999999999999998 5888877665544   446789999999999999999999999999


Q ss_pred             CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHH
Q 024338          103 GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAG  182 (269)
Q Consensus       103 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  182 (269)
                      +++|++|||||.....++.+.+.++|++.+++|+.+++.++|.++|+|.  +.+.++++|| .+..+.|++..|+++|+|
T Consensus        78 g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~--~~~~i~~~ss-~a~~~~~~~~~Y~~sK~a  154 (241)
T d2a4ka1          78 GRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLE--EGGSLVLTGS-VAGLGAFGLAHYAAGKLG  154 (241)
T ss_dssp             SCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCC--TTCEEEEECC-CTTCCHHHHHHHHHCSSH
T ss_pred             CCccEeccccccccccchhhhhccccccccccccccccccccccccccc--cccceeeccc-cccccccCccccchhhHH
Confidence            9999999999998888999999999999999999999999999999884  3455665555 455566889999999999


Q ss_pred             HHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEEE
Q 024338          183 VIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLT  262 (269)
Q Consensus       183 l~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~  262 (269)
                      +++|++++++|++++|||||+|+||+++|++.....++..+...+..|++++.+|+|+|+++.||+ +++++|+|||+|.
T Consensus       155 l~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~fL~-S~~s~~itG~~i~  233 (241)
T d2a4ka1         155 VVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGASPLGRAGRPEEVAQAALFLL-SEESAYITGQALY  233 (241)
T ss_dssp             HHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHHHHHHHHHTSTTCSCBCHHHHHHHHHHHH-SGGGTTCCSCEEE
T ss_pred             HHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhhhHhHHHHHHhCCCCCCCcCHHHHHHHHHHHh-cchhCCCcCceEE
Confidence            999999999999999999999999999999998888888888888999999999999999999999 6788999999999


Q ss_pred             ecCCccC
Q 024338          263 IDGGMVM  269 (269)
Q Consensus       263 ~dgg~~~  269 (269)
                      +|||+++
T Consensus       234 vDGG~s~  240 (241)
T d2a4ka1         234 VDGGRSI  240 (241)
T ss_dssp             ESTTTTT
T ss_pred             eCCCccc
Confidence            9999975

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=100.00  E-value=7.5e-53  Score=354.89  Aligned_cols=242  Identities=28%  Similarity=0.436  Sum_probs=213.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      |+|+||++|||||++|||+++|+.|+++|++|++ ++|+++.++++.+++   +.++..+.+|+++.++++++++++.++
T Consensus         1 M~L~gK~alITGas~GIG~aia~~la~~Ga~V~i-~~r~~~~l~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~   76 (276)
T d1bdba_           1 MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAV-LDKSAERLAELETDH---GDNVLGIVGDVRSLEDQKQAASRCVAR   76 (276)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHc---CCCeeEEecccccHHHHHHHHHHHHHH
Confidence            6789999999999999999999999999999998 588988887777665   568899999999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCc-----ccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhh
Q 024338          102 WGTVDILINNAGITRDTL-----LMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANY  176 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~-----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y  176 (269)
                      ++++|++|||||+.....     ..+.+.+.|++.+++|+.+++.++|+++|.|+++ +|++|+++|..+..+.++...|
T Consensus        77 ~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~-~g~iI~i~S~~~~~~~~~~~~Y  155 (276)
T d1bdba_          77 FGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVAS-RGNVIFTISNAGFYPNGGGPLY  155 (276)
T ss_dssp             HSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCGGGTSTTSSCHHH
T ss_pred             hCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhc-CCCceeeeechhccCCCCCchH
Confidence            999999999999864432     2344556799999999999999999999999765 4899999999999999999999


Q ss_pred             HHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC----------hHHHHHHHhcCCCCCCCCHHHHHHHHHH
Q 024338          177 SAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG----------EDLEKKILEKIPLGRYGQPEEVAGLVEF  246 (269)
Q Consensus       177 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~a~~~~~  246 (269)
                      ++||+|+.+|++++|.|+++ +||||+|+||+++|++.....          ++..+......|++|+.+|+|+|++++|
T Consensus       156 ~asKaal~~ltr~lA~ela~-~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeva~~v~f  234 (276)
T d1bdba_         156 TAAKHAIVGLVRELAFELAP-YVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEYTGAYVF  234 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHTT-TCEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTTSSCCCGGGGSHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhc-ceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            99999999999999999997 499999999999999764321          2344566778899999999999999999


Q ss_pred             hccCCCCCCccccEEEecCCccC
Q 024338          247 LALNPAAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       247 l~~~~~~~~~~G~~i~~dgg~~~  269 (269)
                      |+++++++|+|||+|.||||+++
T Consensus       235 L~S~~~a~~itG~~i~VDGG~~~  257 (276)
T d1bdba_         235 FATRGDAAPATGALLNYDGGLGV  257 (276)
T ss_dssp             HHCHHHHTTCSSCEEEESSSGGG
T ss_pred             HcCCcccCCeeCcEEEECcChhh
Confidence            99656788999999999999864

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=3.8e-52  Score=347.29  Aligned_cols=245  Identities=21%  Similarity=0.353  Sum_probs=211.1

Q ss_pred             ccCCCCCCEEEEeCCCC--chHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHH
Q 024338           20 AAQNVEAPVAVVTGASR--GIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKT   97 (269)
Q Consensus        20 ~~~~~~~k~vlItGas~--giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~   97 (269)
                      +..+|+||++|||||+|  |||+++|++|+++|++|++ .+|+++..++ .+++.....+..++++|++|++++++++++
T Consensus         2 ~~~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i-~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   79 (256)
T d1ulua_           2 LTVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVAL-SYQAERLRPE-AEKLAEALGGALLFRADVTQDEELDALFAG   79 (256)
T ss_dssp             EEECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEE-EESSGGGHHH-HHHHHHHTTCCEEEECCTTCHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEE-EeCcHHHHHH-HHHhhhccCcccccccccCCHHHHHHHHHH
Confidence            34689999999999987  9999999999999999887 4677654444 344444455677899999999999999999


Q ss_pred             HHHhcCCccEEEEccCCCCC----CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCC
Q 024338           98 AVDAWGTVDILINNAGITRD----TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQ  173 (269)
Q Consensus        98 ~~~~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~  173 (269)
                      +.+++++||+||||||....    .++.+.+.++|+..+++|+.+++.+++.++|.|+  ++|+||++||..+..+.|+.
T Consensus        80 ~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~--~~G~Iv~isS~~~~~~~~~~  157 (256)
T d1ulua_          80 VKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLR--EGGGIVTLTYYASEKVVPKY  157 (256)
T ss_dssp             HHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEE--EEEEEEEEECGGGTSBCTTC
T ss_pred             HHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhc--cCCEEEEEeehHhcCCCCCc
Confidence            99999999999999998643    3567889999999999999999999999999884  45899999999999999999


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC--hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCC
Q 024338          174 ANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG--EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNP  251 (269)
Q Consensus       174 ~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~  251 (269)
                      ..|++||+|+++|++++|.|++++|||||+|+||+++|++.....  ++..+...+..|++++.+|+|+|++++||+ ++
T Consensus       158 ~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~-S~  236 (256)
T d1ulua_         158 NVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLL-SP  236 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CHHHHHHHHHHSTTSSCCCHHHHHHHHHHHH-SG
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh-Cc
Confidence            999999999999999999999999999999999999999876543  566677888899999999999999999999 67


Q ss_pred             CCCCccccEEEecCCccC
Q 024338          252 AAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       252 ~~~~~~G~~i~~dgg~~~  269 (269)
                      +++|+|||+|.|||||.+
T Consensus       237 ~s~~itG~~i~VDGG~~~  254 (256)
T d1ulua_         237 LASGITGEVVYVDAGYHI  254 (256)
T ss_dssp             GGTTCCSCEEEESTTGGG
T ss_pred             hhCCccCCeEEECcCEeC
Confidence            889999999999999864

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=4e-51  Score=343.95  Aligned_cols=246  Identities=35%  Similarity=0.573  Sum_probs=221.9

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      ..+|+||++|||||++|||+++|+.|+++|++|+++..++.+.++++.+++++.+.++.++.+|++|+++++++++++.+
T Consensus        13 ~~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~   92 (272)
T d1g0oa_          13 SASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVK   92 (272)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHH
Confidence            45799999999999999999999999999999999777778888999999999899999999999999999999999999


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccc-cCCCCChhhHHh
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGL-VGNIGQANYSAA  179 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~-~~~~~~~~Y~~s  179 (269)
                      .++++|++|||+|.....++.+.+.++|++.+++|+.+++.+.++++|+|.  +.+++++++|..+. .+.++...|+++
T Consensus        93 ~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~--~~g~~i~i~s~~~~~~~~~~~~~Y~as  170 (272)
T d1g0oa_          93 IFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLE--IGGRLILMGSITGQAKAVPKHAVYSGS  170 (272)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSC--TTCEEEEECCGGGTCSSCSSCHHHHHH
T ss_pred             HhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccc--cccccccccccccccccccchhhHHHH
Confidence            999999999999998888999999999999999999999999999999994  45788999888765 457778899999


Q ss_pred             HHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC-----------hHH--HHHHHhcCCCCCCCCHHHHHHHHHH
Q 024338          180 KAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG-----------EDL--EKKILEKIPLGRYGQPEEVAGLVEF  246 (269)
Q Consensus       180 K~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~-----------~~~--~~~~~~~~~~~~~~~~~~~a~~~~~  246 (269)
                      |+|+++|++++|.|++++|||||+|+||+++|++.+...           .+.  .....+..|++++.+|+|+|++++|
T Consensus       171 Kaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~peevA~~v~f  250 (272)
T d1g0oa_         171 KGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCF  250 (272)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCCCCCcCHHHHHHHHHH
Confidence            999999999999999999999999999999999753321           111  1234567899999999999999999


Q ss_pred             hccCCCCCCccccEEEecCCccC
Q 024338          247 LALNPAAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       247 l~~~~~~~~~~G~~i~~dgg~~~  269 (269)
                      |+ +++++|+|||+|.||||++|
T Consensus       251 L~-s~~s~~itG~~i~vDGG~~m  272 (272)
T d1g0oa_         251 LA-SNDGGWVTGKVIGIDGGACM  272 (272)
T ss_dssp             HH-SGGGTTCCSCEEEESTTCCC
T ss_pred             Hh-CchhcCccCceEeECCCCCC
Confidence            99 67889999999999999986

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=2.8e-51  Score=337.35  Aligned_cols=228  Identities=30%  Similarity=0.468  Sum_probs=206.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      |+||++|||||++|||+++|+.|+++|++|++ .+|+++.+++       .+  ..++.||+++.      ++++.++++
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~-~~r~~~~l~~-------~~--~~~~~~Dv~~~------~~~~~~~~g   65 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTI-CARNEELLKR-------SG--HRYVVCDLRKD------LDLLFEKVK   65 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEE-EESCHHHHHH-------TC--SEEEECCTTTC------HHHHHHHSC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEE-EECCHHHHHh-------cC--CcEEEcchHHH------HHHHHHHhC
Confidence            68999999999999999999999999999988 5788755432       22  24578999863      456677889


Q ss_pred             CccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHH
Q 024338          104 TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGV  183 (269)
Q Consensus       104 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al  183 (269)
                      ++|+||||||.....++.+.+.++|++.+++|+.+++.++|+++|.|++++.|+||+++|..+..+.++...|++||+|+
T Consensus        66 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~~~~~Y~asKaal  145 (234)
T d1o5ia_          66 EVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMAL  145 (234)
T ss_dssp             CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred             CCcEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccccccccchhHHHHH
Confidence            99999999999888899999999999999999999999999999999998999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhccCCeEEEEEecCCccCCccccc-ChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEEE
Q 024338          184 IGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL-GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLT  262 (269)
Q Consensus       184 ~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~  262 (269)
                      .+|++++|.|++++|||||+|+||+++|++.... .+...+...+..|++++.+|+|+|++++||+ +++++|+|||+|.
T Consensus       146 ~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~-S~~s~~itG~~i~  224 (234)
T d1o5ia_         146 TGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFLC-SEKASYLTGQTIV  224 (234)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHH-SGGGTTCCSCEEE
T ss_pred             HHHHHHHHHHhcccCeEEeecccCccchhhhhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh-ChhhcCCcCcEEE
Confidence            9999999999999999999999999999987654 4556677788899999999999999999999 6788999999999


Q ss_pred             ecCCcc
Q 024338          263 IDGGMV  268 (269)
Q Consensus       263 ~dgg~~  268 (269)
                      +|||++
T Consensus       225 vDGG~s  230 (234)
T d1o5ia_         225 VDGGLS  230 (234)
T ss_dssp             ESTTCC
T ss_pred             ECcccc
Confidence            999986

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=1e-50  Score=334.93  Aligned_cols=231  Identities=29%  Similarity=0.436  Sum_probs=210.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCc------EEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCK------VLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~------v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      +++|||||++|||+++|+.|+++|++      ++++++|+.+.++++.+++++.+.+..++.||++|+++++++++++.+
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE   81 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            67999999999999999999999998      244479999999999999998888999999999999999999999999


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhH
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                      ++|++|+||||||.....++.+.+.++|++.+++|+.+++.++|+++|+|++++.|+||++||..+..+.|+...|++||
T Consensus        82 ~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asK  161 (240)
T d2bd0a1          82 RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSK  161 (240)
T ss_dssp             HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             HcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCCCChHHHHHH
Confidence            99999999999999988999999999999999999999999999999999998999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCcccc-
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQ-  259 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~-  259 (269)
                      +|+.+|+++|+.|++++|||||+|+||+++|++.+...++..         .++..|+|+|++++||++++ +++++|+ 
T Consensus       162 ~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~~~~~---------~~~~~PedvA~~v~~l~s~~-~~~~~~~~  231 (240)
T d2bd0a1         162 FGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDEMQ---------ALMMMPEDIAAPVVQAYLQP-SRTVVEEI  231 (240)
T ss_dssp             HHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCSTTG---------GGSBCHHHHHHHHHHHHTSC-TTEEEEEE
T ss_pred             HHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcCHhhH---------hcCCCHHHHHHHHHHHHcCC-ccCccCCE
Confidence            999999999999999999999999999999999876543321         23458999999999999654 4566665 


Q ss_pred             EEEecCCc
Q 024338          260 VLTIDGGM  267 (269)
Q Consensus       260 ~i~~dgg~  267 (269)
                      ++..+||-
T Consensus       232 ~i~p~~G~  239 (240)
T d2bd0a1         232 ILRPTSGD  239 (240)
T ss_dssp             EEEETTCC
T ss_pred             EEEecCCC
Confidence            66677774

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-50  Score=335.90  Aligned_cols=244  Identities=32%  Similarity=0.450  Sum_probs=217.3

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcC--CcEEEEEccCCCHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASG--GQALTFGGDVSKEADVESMIKTA   98 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dls~~~~~~~~~~~~   98 (269)
                      |.+|+||++|||||++|||+++|+.|+++|++|++ .+|++++++++.+++++.+  .++.++.||++|+++++++++++
T Consensus         5 M~~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~-~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~   83 (257)
T d1xg5a_           5 MERWRDRLALVTGASGGIGAAVARALVQQGLKVVG-CARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAI   83 (257)
T ss_dssp             CGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHH
Confidence            44589999999999999999999999999999888 5899999999999998864  57888999999999999999999


Q ss_pred             HHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC--CCeEEEEcCCccccCC--CCCh
Q 024338           99 VDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK--KGRIINIASVVGLVGN--IGQA  174 (269)
Q Consensus        99 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~iv~isS~~~~~~~--~~~~  174 (269)
                      .+++++||+||||||.....++.+.+.++|++.+++|+.+++.+++.++|.|++++  +|+||++||..+....  ++..
T Consensus        84 ~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~~~~~  163 (257)
T d1xg5a_          84 RSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTH  163 (257)
T ss_dssp             HHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGH
T ss_pred             HHhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCCcccH
Confidence            99999999999999998889999999999999999999999999999999997654  6899999999987654  4567


Q ss_pred             hhHHhHHHHHHHHHHHHHHh--ccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCC
Q 024338          175 NYSAAKAGVIGLTKTVAKEY--ASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPA  252 (269)
Q Consensus       175 ~Y~~sK~al~~~~~~la~e~--~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~  252 (269)
                      .|+++|+++.+|+++|+.|+  ++.||+||+|+||+++|++.....+...+......|.+++.+|+|+|++++||+ +++
T Consensus       164 ~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~fL~-s~~  242 (257)
T d1xg5a_         164 FYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCLKPEDVAEAVIYVL-STP  242 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHHHC---CBCHHHHHHHHHHHH-HSC
T ss_pred             HHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChhhHHHHHhcCCCCCCcCHHHHHHHHHHHh-CCh
Confidence            79999999999999999998  788999999999999999877666655666777789999999999999999999 557


Q ss_pred             CCCccccEEEecCC
Q 024338          253 AGYITGQVLTIDGG  266 (269)
Q Consensus       253 ~~~~~G~~i~~dgg  266 (269)
                      ++++|||++..++|
T Consensus       243 a~~itG~i~i~~~g  256 (257)
T d1xg5a_         243 AHIQIGDIQMRPTG  256 (257)
T ss_dssp             TTEEEEEEEEEETT
T ss_pred             hcCeECCEEEEeCC
Confidence            78999997555555

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-50  Score=337.62  Aligned_cols=233  Identities=28%  Similarity=0.463  Sum_probs=207.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHc--CCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS--GGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      ..||++|||||++|||+++|+.|+++|++|++ ++|+.+++++..+++.+.  +.++.++.+|++|+++++++++++.++
T Consensus         1 i~GKvalITGas~GIG~aia~~la~~Ga~V~i-~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (254)
T d2gdza1           1 VNGKVALVTGAAQGIGRAFAEALLLKGAKVAL-VDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDH   79 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHH
Confidence            36999999999999999999999999999888 589999999988888664  457899999999999999999999999


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC---CCeEEEEcCCccccCCCCChhhHH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK---KGRIINIASVVGLVGNIGQANYSA  178 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~~~iv~isS~~~~~~~~~~~~Y~~  178 (269)
                      +|+||+||||||....        ++|++.+++|+.+++.+++.++|+|.+++   .|+||++||..+..+.|+...|++
T Consensus        80 ~G~iDilVnnAg~~~~--------~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~a  151 (254)
T d2gdza1          80 FGRLDILVNNAGVNNE--------KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCA  151 (254)
T ss_dssp             HSCCCEEEECCCCCCS--------SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             cCCcCeeccccccccc--------ccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCCccchHH
Confidence            9999999999998644        35899999999999999999999997653   478999999999999999999999


Q ss_pred             hHHHHHHHHHH--HHHHhccCCeEEEEEecCCccCCcccccCh--------HHHHHHHhcCCCCCCCCHHHHHHHHHHhc
Q 024338          179 AKAGVIGLTKT--VAKEYASRNINVNAIAPGFIASDMTAKLGE--------DLEKKILEKIPLGRYGQPEEVAGLVEFLA  248 (269)
Q Consensus       179 sK~al~~~~~~--la~e~~~~gi~v~~v~pG~v~t~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~a~~~~~l~  248 (269)
                      ||+|+.+|+++  |+.|++++|||||+|+||+++|++.+...+        +..+...+..|++++.+|+|+|++++||+
T Consensus       152 sKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~  231 (254)
T d2gdza1         152 SKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLI  231 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHH
Confidence            99999999997  688999999999999999999998765432        23345566778888999999999999999


Q ss_pred             cCCCCCCccccEEEecCCcc
Q 024338          249 LNPAAGYITGQVLTIDGGMV  268 (269)
Q Consensus       249 ~~~~~~~~~G~~i~~dgg~~  268 (269)
                      ++ +  ++|||+|.||||+.
T Consensus       232 s~-~--~itG~~i~VdGG~~  248 (254)
T d2gdza1         232 ED-D--ALNGAIMKITTSKG  248 (254)
T ss_dssp             HC-T--TCSSCEEEEETTTE
T ss_pred             cC-C--CCCCCEEEECCCCe
Confidence            64 3  59999999999974

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.3e-50  Score=343.05  Aligned_cols=234  Identities=37%  Similarity=0.549  Sum_probs=209.9

Q ss_pred             ccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEe--------cCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHH
Q 024338           20 AAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNY--------ARSSKEAEEVCKEIEASGGQALTFGGDVSKEADV   91 (269)
Q Consensus        20 ~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~--------~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~   91 (269)
                      ++|+|+||++|||||++|||+++|+.|+++|++|++..        .|+.+.++++.+++.....   ...+|++|.+++
T Consensus         1 sPm~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~d~~~~~~~   77 (302)
T d1gz6a_           1 SPLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGG---KAVANYDSVEAG   77 (302)
T ss_dssp             CCCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTC---EEEEECCCGGGH
T ss_pred             CCcCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhccc---ccccccchHHHH
Confidence            36889999999999999999999999999999998852        3455677778888765443   567899999999


Q ss_pred             HHHHHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCC
Q 024338           92 ESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNI  171 (269)
Q Consensus        92 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~  171 (269)
                      +++++++.+++|+||+||||||+....++.+.+.++|++.+++|+.+++.++|+++|+|++++.|+||++||..+..+.+
T Consensus        78 ~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~~  157 (302)
T d1gz6a_          78 EKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNF  157 (302)
T ss_dssp             HHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT
T ss_pred             HHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCCC
Confidence            99999999999999999999999988999999999999999999999999999999999998999999999999999999


Q ss_pred             CChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCC
Q 024338          172 GQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNP  251 (269)
Q Consensus       172 ~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~  251 (269)
                      +...|++||+|+.+|+++|+.|++++|||||+|+||++.|++.....++..+          ...|+|+|++++||+ ++
T Consensus       158 ~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~~~~~~~----------~~~PedvA~~v~fL~-S~  226 (302)
T d1gz6a_         158 GQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVMPEDLVE----------ALKPEYVAPLVLWLC-HE  226 (302)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGSCHHHHH----------HSCGGGTHHHHHHHT-ST
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcCcHhhHh----------cCCHHHHHHHHHHHc-CC
Confidence            9999999999999999999999999999999999999998876665544322          236999999999999 45


Q ss_pred             CCCCccccEEEecCCcc
Q 024338          252 AAGYITGQVLTIDGGMV  268 (269)
Q Consensus       252 ~~~~~~G~~i~~dgg~~  268 (269)
                      .+ ++|||+|.+||||+
T Consensus       227 ~a-~itG~~i~vdGG~~  242 (302)
T d1gz6a_         227 SC-EENGGLFEVGAGWI  242 (302)
T ss_dssp             TC-CCCSCEEEEETTEE
T ss_pred             Cc-CCCCcEEEeCCCce
Confidence            54 79999999999985

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.1e-50  Score=332.33  Aligned_cols=236  Identities=29%  Similarity=0.497  Sum_probs=209.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      +|+||++|||||++|||+++|+.|+++|++|++ ++|++++++++.+     ...+....+|+.+.+.++.    ..+.+
T Consensus         3 ~l~gK~alITGas~GIG~aia~~la~~G~~Vi~-~~r~~~~l~~~~~-----~~~~~~~~~d~~~~~~~~~----~~~~~   72 (245)
T d2ag5a1           3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIA-TDINESKLQELEK-----YPGIQTRVLDVTKKKQIDQ----FANEV   72 (245)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHGGGGG-----STTEEEEECCTTCHHHHHH----HHHHC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEE-EeCCHHHHHHHHh-----ccCCceeeeeccccccccc----ccccc
Confidence            489999999999999999999999999999998 5788877665443     2457788889988665554    45566


Q ss_pred             CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccc-cCCCCChhhHHhHH
Q 024338          103 GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGL-VGNIGQANYSAAKA  181 (269)
Q Consensus       103 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~-~~~~~~~~Y~~sK~  181 (269)
                      +++|+||||||.....++.+.+.++|++.+++|+.+++.+++.+.|.|.+++.|+||++||..+. .+.++...|+++|+
T Consensus        73 ~~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~~Y~~sKa  152 (245)
T d2ag5a1          73 ERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKA  152 (245)
T ss_dssp             SCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHHH
T ss_pred             ccceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCCccchhHHHHHHH
Confidence            89999999999998889999999999999999999999999999999999999999999998775 57889999999999


Q ss_pred             HHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc------ChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCC
Q 024338          182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL------GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGY  255 (269)
Q Consensus       182 al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~  255 (269)
                      |+++|++++|.|++++|||||+|+||+++||+.+..      .....+......|++++.+|+|+|+++.||+ +++++|
T Consensus       153 al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedva~~v~fL~-s~~s~~  231 (245)
T d2ag5a1         153 AVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLA-SDESAY  231 (245)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHH-SGGGTT
T ss_pred             HHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh-ChhhCC
Confidence            999999999999999999999999999999986532      2335566778899999999999999999999 678899


Q ss_pred             ccccEEEecCCccC
Q 024338          256 ITGQVLTIDGGMVM  269 (269)
Q Consensus       256 ~~G~~i~~dgg~~~  269 (269)
                      +|||+|.||||++|
T Consensus       232 iTG~~i~VDGG~sl  245 (245)
T d2ag5a1         232 VTGNPVIIDGGWSL  245 (245)
T ss_dssp             CCSCEEEECTTGGG
T ss_pred             CcCceEEeCCCcCC
Confidence            99999999999985

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=100.00  E-value=1.1e-48  Score=332.51  Aligned_cols=245  Identities=27%  Similarity=0.440  Sum_probs=219.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHc-CCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS-GGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      .+|+||++|||||++|||+++|++|+++|++|++ .+|+.+++++..+++... +.+..++.+|+++.++++++++.+.+
T Consensus        21 ~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii-~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~   99 (294)
T d1w6ua_          21 NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVI-ASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIK   99 (294)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEE-EECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhh
Confidence            4899999999999999999999999999999998 589998888888877544 67888999999999999999999999


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-CCCCeEEEEcCCccccCCCCChhhHHh
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMK-KKKGRIINIASVVGLVGNIGQANYSAA  179 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~iv~isS~~~~~~~~~~~~Y~~s  179 (269)
                      +++++|++|||||.....++...+.+++++.+.+|+.+.+.+.+...+.+.. +..+.+++++|..+..+.++...|++|
T Consensus       100 ~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~~~~Ysas  179 (294)
T d1w6ua_         100 VAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASA  179 (294)
T ss_dssp             HTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHHHH
T ss_pred             hccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcccccchHHHH
Confidence            9999999999999988888999999999999999999999999988876654 556778999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc---ChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCc
Q 024338          180 KAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL---GEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYI  256 (269)
Q Consensus       180 K~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~  256 (269)
                      |+|+.+|++++|.|++++|||||+|+||+++|++....   .+...+......|++++.+|+|+|+++.||+ +++++|+
T Consensus       180 Kaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~-sd~s~~i  258 (294)
T d1w6ua_         180 KAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLC-SDYASWI  258 (294)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHHHHHHHHHT-SGGGTTC
T ss_pred             HHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCCCCCCCHHHHHHHHHHHh-CchhcCC
Confidence            99999999999999999999999999999999986543   3456677788899999999999999999999 6678899


Q ss_pred             cccEEEecCCcc
Q 024338          257 TGQVLTIDGGMV  268 (269)
Q Consensus       257 ~G~~i~~dgg~~  268 (269)
                      |||+|.+|||+.
T Consensus       259 tG~~i~vDGG~~  270 (294)
T d1w6ua_         259 NGAVIKFDGGEE  270 (294)
T ss_dssp             CSCEEEESTTHH
T ss_pred             CCcEEEECCChh
Confidence            999999999964

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-46  Score=310.73  Aligned_cols=219  Identities=27%  Similarity=0.407  Sum_probs=201.0

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      .++++||++|||||++|||+++|++|+++|++|++ .+|+.++++++.+++++.+.++.++.||++|.++++++++++.+
T Consensus         2 ~~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l-~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~   80 (244)
T d1yb1a_           2 RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVL-WDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKA   80 (244)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999988 68999999999999998889999999999999999999999999


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhH
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                      ++|++|++|||||......+.+.+.++|++++++|+.+++.++++++|.|.+++.|+||++||..+..+.|+++.|++||
T Consensus        81 ~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asK  160 (244)
T d1yb1a_          81 EIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSK  160 (244)
T ss_dssp             HTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHHH
T ss_pred             HcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCCCcHHHHHHH
Confidence            99999999999999988888999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhcc---CCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccC
Q 024338          181 AGVIGLTKTVAKEYAS---RNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALN  250 (269)
Q Consensus       181 ~al~~~~~~la~e~~~---~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~  250 (269)
                      +|+.+|+++|+.|+++   +||+|++|+||+++|++.+....          +.....+|+++|+.++.....
T Consensus       161 aal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~~~----------~~~~~~~pe~va~~i~~~~~~  223 (244)
T d1yb1a_         161 FAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPST----------SLGPTLEPEEVVNRLMHGILT  223 (244)
T ss_dssp             HHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCTHH----------HHCCCCCHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCcCc----------cccCCCCHHHHHHHHHHHHhc
Confidence            9999999999999876   58999999999999998765321          112345899999999887644

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=100.00  E-value=7.6e-46  Score=313.31  Aligned_cols=240  Identities=30%  Similarity=0.454  Sum_probs=205.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcC-CcEEE-----------------EEccCCCH
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASG-GQALT-----------------FGGDVSKE   88 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~-~~~~~-----------------~~~Dls~~   88 (269)
                      .++|||||++|||+++|+.|+++|++|+++..|+.+..+++.+++.+.. .....                 +.+|+++.
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~   82 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF   82 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCH
Confidence            6899999999999999999999999999987888888888988887643 33333                 45569999


Q ss_pred             HHHHHHHHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHH--------------HHHHHHhHHHHHHHHHHHHHHH---
Q 024338           89 ADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQ--------------DVIDLNLTGVFLCTQAAAKIMM---  151 (269)
Q Consensus        89 ~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~--------------~~~~~n~~~~~~l~~~~~~~l~---  151 (269)
                      ++++++++++.+++|+||+||||||.....++.+.+.++|+              ..+.+|+.+++.+.+.+.+.+.   
T Consensus        83 ~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~  162 (284)
T d1e7wa_          83 TRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTP  162 (284)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSC
T ss_pred             HHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhhH
Confidence            99999999999999999999999999877777776665544              4789999999999999988753   


Q ss_pred             ---hCCCCeEEEEcCCccccCCCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhc
Q 024338          152 ---KKKKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEK  228 (269)
Q Consensus       152 ---~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~  228 (269)
                         +...++|++++|.....+.++...|++||+|+.+|++++|.|++++|||||+|+||++.+  .....++..+.....
T Consensus       163 ~~~~~~~~~ii~~~s~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~--~~~~~~~~~~~~~~~  240 (284)
T d1e7wa_         163 AKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVL--VDDMPPAVWEGHRSK  240 (284)
T ss_dssp             GGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCC--GGGSCHHHHHHHHTT
T ss_pred             HHhcCCCCcccccccccccCCccceeeeccccccchhhhHHHHHHhCCccccccccccccccc--cccCCHHHHHHHHhc
Confidence               335678999999999999999999999999999999999999999999999999998554  445566777777788


Q ss_pred             CCC-CCCCCHHHHHHHHHHhccCCCCCCccccEEEecCCccC
Q 024338          229 IPL-GRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       229 ~~~-~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg~~~  269 (269)
                      .|+ +++.+|+|+|++++||+ +++++|+|||+|.||||+++
T Consensus       241 ~pl~~R~~~peeiA~~v~fL~-S~~s~~itG~~i~VDGG~sl  281 (284)
T d1e7wa_         241 VPLYQRDSSAAEVSDVVIFLC-SSKAKYITGTCVKVDGGYSL  281 (284)
T ss_dssp             CTTTTSCBCHHHHHHHHHHHH-SGGGTTCCSCEEEESTTGGG
T ss_pred             CCCCCCCCCHHHHHHHHHHHh-CchhcCccCCeEEECcChhc
Confidence            875 89999999999999999 67889999999999999975

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=100.00  E-value=7.7e-47  Score=314.09  Aligned_cols=234  Identities=25%  Similarity=0.289  Sum_probs=193.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHc-CCcEEEEEccCC-CHHHHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS-GGQALTFGGDVS-KEADVESMIKTAV   99 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dls-~~~~~~~~~~~~~   99 (269)
                      |+++||++|||||++|||+++|++|+++|++|+++.++++ ..+++.+..... ..++.++.+|++ +.++++++++++.
T Consensus         1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~   79 (254)
T d1sbya1           1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVE-NPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIF   79 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSC-CHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcc-cHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHH
Confidence            6899999999999999999999999999999988655443 344443332222 457889999998 7788999999999


Q ss_pred             HhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC---CCCeEEEEcCCccccCCCCChhh
Q 024338          100 DAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKK---KKGRIINIASVVGLVGNIGQANY  176 (269)
Q Consensus       100 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~---~~~~iv~isS~~~~~~~~~~~~Y  176 (269)
                      +++++||+||||||..        +.+.|++.+++|+.+++.+++.++|.|.++   ..|+||++||..+..+.+++..|
T Consensus        80 ~~~g~iDilvnnAG~~--------~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y  151 (254)
T d1sbya1          80 DQLKTVDILINGAGIL--------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVY  151 (254)
T ss_dssp             HHHSCCCEEEECCCCC--------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHH
T ss_pred             HHcCCCCEEEeCCCCC--------CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCCCHHH
Confidence            9999999999999964        346799999999999999999999999664   35899999999999999999999


Q ss_pred             HHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccCh--HHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCC
Q 024338          177 SAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGE--DLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAG  254 (269)
Q Consensus       177 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~  254 (269)
                      ++||+|+.+|+++|+.|+++.|||||+|+||+++|++.+...+  +..+...+....++..+||++|+.++++.++    
T Consensus       152 ~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~va~~~~~~~~~----  227 (254)
T d1sbya1         152 SASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAIEA----  227 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSCCEEHHHHHHHHHHHHHH----
T ss_pred             HHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhHHHHHHhccccCCCCCHHHHHHHHHHhhhC----
Confidence            9999999999999999999999999999999999997654322  1111112222233455899999999988743    


Q ss_pred             CccccEEEecCCcc
Q 024338          255 YITGQVLTIDGGMV  268 (269)
Q Consensus       255 ~~~G~~i~~dgg~~  268 (269)
                      ..||+++.+|||++
T Consensus       228 ~~tG~vi~vdgG~l  241 (254)
T d1sbya1         228 NKNGAIWKLDLGTL  241 (254)
T ss_dssp             CCTTCEEEEETTEE
T ss_pred             CCCCCEEEECCCEe
Confidence            36999999999974

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-45  Score=306.61  Aligned_cols=235  Identities=32%  Similarity=0.521  Sum_probs=204.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      .+++||++|||||++|||+++|++|+++|++|++ .+|+.+.+++..+++   +.+.....+|+.+.+.++....++...
T Consensus         1 ~slkGKvalITGas~GIG~aia~~la~~G~~V~~-~~r~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (248)
T d2o23a1           1 RSVKGLVAVITGGASGLGLATAERLVGQGASAVL-LDLPNSGGEAQAKKL---GNNCVFAPADVTSEKDVQTALALAKGK   76 (248)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE-EECTTSSHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEE-EeCChHHHHHHHHHh---CCCcccccccccccccccccccccccc
Confidence            3689999999999999999999999999999888 578888887777766   567888999999999999999999999


Q ss_pred             cCCccEEEEccCCCCC------CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC------CCCeEEEEcCCccccC
Q 024338          102 WGTVDILINNAGITRD------TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKK------KKGRIINIASVVGLVG  169 (269)
Q Consensus       102 ~~~id~li~~ag~~~~------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~~~~iv~isS~~~~~~  169 (269)
                      +..+|.+++|++....      .++.+.+.++|++.+++|+.+++++++++.|.|..+      +.|+||++||..+..+
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~  156 (248)
T d2o23a1          77 FGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEG  156 (248)
T ss_dssp             HSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC
T ss_pred             cccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccC
Confidence            9999999999886543      345677889999999999999999999999998643      5689999999999999


Q ss_pred             CCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCC-CCCCCHHHHHHHHHHhc
Q 024338          170 NIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPL-GRYGQPEEVAGLVEFLA  248 (269)
Q Consensus       170 ~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~~~l~  248 (269)
                      .|+...|++||+|+++|+++|+.|++++|||||+|+||+++|++.....++..+...+..|+ +|+.+|+|+|++++||+
T Consensus       157 ~~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~~R~g~peevA~~v~fL~  236 (248)
T d2o23a1         157 QVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFPSRLGDPAEYAHLVQAII  236 (248)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----------CHHHHTCSSSCSCBCHHHHHHHHHHHH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCCHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999888777777777788886 88999999999999999


Q ss_pred             cCCCCCCccccEEEe
Q 024338          249 LNPAAGYITGQVLTI  263 (269)
Q Consensus       249 ~~~~~~~~~G~~i~~  263 (269)
                      +   ++|+|||+|+|
T Consensus       237 s---~~~itGq~I~v  248 (248)
T d2o23a1         237 E---NPFLNGEVIRL  248 (248)
T ss_dssp             H---CTTCCSCEEEE
T ss_pred             h---CCCCCceEeEC
Confidence            5   36999999986

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=4.2e-46  Score=311.05  Aligned_cols=236  Identities=25%  Similarity=0.288  Sum_probs=207.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHH---cCCcEEEEecCCHHHHHHHHHHHHHc--CCcEEEEEccCCCHHHHHHHHHH
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGK---AGCKVLVNYARSSKEAEEVCKEIEAS--GGQALTFGGDVSKEADVESMIKT   97 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~---~G~~v~i~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dls~~~~~~~~~~~   97 (269)
                      .|+||+++||||++|||+++|++|++   +|++|++ ++|+.+.++++.+++...  +.++.+++||++|++++++++++
T Consensus         3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~-~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~   81 (259)
T d1oaaa_           3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLV-SARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSA   81 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEE-EESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEE-EECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHH
Confidence            57899999999999999999999996   7999988 589999999999999765  45788999999999999999999


Q ss_pred             HHHh----cCCccEEEEccCCCC---CCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC--CCeEEEEcCCcccc
Q 024338           98 AVDA----WGTVDILINNAGITR---DTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKK--KGRIINIASVVGLV  168 (269)
Q Consensus        98 ~~~~----~~~id~li~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~iv~isS~~~~~  168 (269)
                      +.+.    ++.+|++|||||...   ..++.+.+.++|++.+++|+.+++.+++.++|+|++++  .|+||++||..+..
T Consensus        82 ~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~  161 (259)
T d1oaaa_          82 VRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ  161 (259)
T ss_dssp             HHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS
T ss_pred             HHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccC
Confidence            8773    357899999999753   35688999999999999999999999999999997765  57999999999999


Q ss_pred             CCCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc-----ChHHHHHHHhcCCCCCCCCHHHHHHH
Q 024338          169 GNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL-----GEDLEKKILEKIPLGRYGQPEEVAGL  243 (269)
Q Consensus       169 ~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~a~~  243 (269)
                      +.|++..|++||+|+++|+++|+.|  ..|||||+|+||+++|++....     .++..+.+....+.+++.+|+|+|+.
T Consensus       162 ~~~~~~~Y~asKaal~~lt~~la~e--~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~evA~~  239 (259)
T d1oaaa_         162 PYKGWGLYCAGKAARDMLYQVLAAE--EPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQK  239 (259)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHH--CTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHHHHHHH
T ss_pred             CCccchHHHHHHHHHHHHHHHHHhC--CCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcCCCCCCCCHHHHHHH
Confidence            9999999999999999999999999  5699999999999999986432     23444555566678889999999999


Q ss_pred             HHHhccCCCCCCccccEEEe
Q 024338          244 VEFLALNPAAGYITGQVLTI  263 (269)
Q Consensus       244 ~~~l~~~~~~~~~~G~~i~~  263 (269)
                      +++|+++  .+|+|||+|++
T Consensus       240 i~~ll~~--~s~~TG~~idv  257 (259)
T d1oaaa_         240 LLGLLQK--DTFQSGAHVDF  257 (259)
T ss_dssp             HHHHHHH--CCSCTTEEEET
T ss_pred             HHHHhhh--ccCCCCCeEEe
Confidence            9999953  45999999976

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=6.6e-45  Score=303.58  Aligned_cols=242  Identities=18%  Similarity=0.284  Sum_probs=211.0

Q ss_pred             CCCCCEEEEeCCCC--chHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           23 NVEAPVAVVTGASR--GIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        23 ~~~~k~vlItGas~--giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      -|+||++|||||++  |||+++|+.|+++|++|+++ .|+++..+.. +++.....+...+.+|+++..++...++++.+
T Consensus         2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (258)
T d1qsga_           2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFT-YQNDKLKGRV-EEFAAQLGSDIVLQCDVAEDASIDTMFAELGK   79 (258)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEE-ESSTTTHHHH-HHHHHHTTCCCEEECCTTCHHHHHHHHHHHHT
T ss_pred             cCCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEE-eCCHHHHHHH-HHHHhhcCCcceeecccchHHHHHHHHHHhhh
Confidence            37899999999998  89999999999999999985 6765544443 44444455677889999999999999999999


Q ss_pred             hcCCccEEEEccCCCCCCcc-----cCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChh
Q 024338          101 AWGTVDILINNAGITRDTLL-----MRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQAN  175 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~  175 (269)
                      .++++|++|||++......+     .....+.+...+++|+.+.+.+.+.+.|.+  ++++.|+++||..+..+.|....
T Consensus        80 ~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~Ii~iss~~~~~~~~~~~~  157 (258)
T d1qsga_          80 VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSML--NPGSALLTLSYLGAERAIPNYNV  157 (258)
T ss_dssp             TCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGE--EEEEEEEEEECGGGTSBCTTTTH
T ss_pred             cccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhc--cCCcEEEEecchhhccCCCCcHH
Confidence            99999999999998654333     456778899999999999999999999988  45668999999999999999999


Q ss_pred             hHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC--hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCC
Q 024338          176 YSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG--EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAA  253 (269)
Q Consensus       176 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~  253 (269)
                      |++||+|+++|++++|.|++++|||||+|+||+++|++.....  ....+......|++++.+|||+|+++.||+ ++++
T Consensus       158 Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeia~~v~fL~-s~~s  236 (258)
T d1qsga_         158 MGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLC-SDLS  236 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHT-SGGG
T ss_pred             HHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchhhhHHHHHHhCCCCCCCcCHHHHHHHHHHHh-Cchh
Confidence            9999999999999999999999999999999999999987654  334556677899999999999999999999 6778


Q ss_pred             CCccccEEEecCCccC
Q 024338          254 GYITGQVLTIDGGMVM  269 (269)
Q Consensus       254 ~~~~G~~i~~dgg~~~  269 (269)
                      +|+|||+|.+|||+++
T Consensus       237 ~~itG~~i~vDGG~~i  252 (258)
T d1qsga_         237 AGISGEVVHVDGGFSI  252 (258)
T ss_dssp             TTCCSCEEEESTTGGG
T ss_pred             cCccCceEEECcCHHH
Confidence            9999999999999864

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.9e-45  Score=306.31  Aligned_cols=234  Identities=24%  Similarity=0.280  Sum_probs=191.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEE--ecCCHHHH---HHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVN--YARSSKEA---EEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~--~~r~~~~~---~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      .|++|||||++|||+++|+.|+++|++++.+  ..|+.+..   .+..+++...+.++..+.||++|.++++++++++.+
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~   81 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence            5899999999999999999999999985542  35554433   444444444577899999999999999999988754


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhH
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                        +++|+||||+|.....++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.|+...|++||
T Consensus        82 --g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~~~~~Y~asK  159 (285)
T d1jtva_          82 --GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASK  159 (285)
T ss_dssp             --SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHHHH
T ss_pred             --cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCCCchHHHHHH
Confidence              789999999999988999999999999999999999999999999999998899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChH-----------HHHH------HHhcCCCCCCCCHHHHHHH
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGED-----------LEKK------ILEKIPLGRYGQPEEVAGL  243 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~-----------~~~~------~~~~~~~~~~~~~~~~a~~  243 (269)
                      +|+.+|+++|+.|++++||+||+|+||+++|++.......           ..+.      ..+..+.++..+|+|+|++
T Consensus       160 aal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PeeVA~~  239 (285)
T d1jtva_         160 FALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAEV  239 (285)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhhcccCCCHHHHHHH
Confidence            9999999999999999999999999999999987543211           1111      1122333456689999999


Q ss_pred             HHHhccCC--CCCCccccEE
Q 024338          244 VEFLALNP--AAGYITGQVL  261 (269)
Q Consensus       244 ~~~l~~~~--~~~~~~G~~i  261 (269)
                      +++++.++  ...+++|+.+
T Consensus       240 v~~~~~~~~p~~ry~~g~~~  259 (285)
T d1jtva_         240 FLTALRAPKPTLRYFTTERF  259 (285)
T ss_dssp             HHHHHHCSSCCSEEESCSTT
T ss_pred             HHHHHhCCCCCeEEecHHHH
Confidence            99998654  3456777643

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=2.2e-44  Score=310.30  Aligned_cols=240  Identities=16%  Similarity=0.219  Sum_probs=198.8

Q ss_pred             CCCEEEEeC--CCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHc------------CCcEEEE---------
Q 024338           25 EAPVAVVTG--ASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS------------GGQALTF---------   81 (269)
Q Consensus        25 ~~k~vlItG--as~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~------------~~~~~~~---------   81 (269)
                      .+|++||||  +++|||+++|+.|+++|++|++. .++..............            .......         
T Consensus         1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (329)
T d1uh5a_           1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFG-IWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTA   79 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEE-ECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSG
T ss_pred             CCcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEE-eCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhh
Confidence            379999999  55899999999999999999884 56554443333322111            0111222         


Q ss_pred             -----------EccCCCHHHHHHHHHHHHHhcCCccEEEEccCCCCC--CcccCCCHHHHHHHHHHHhHHHHHHHHHHHH
Q 024338           82 -----------GGDVSKEADVESMIKTAVDAWGTVDILINNAGITRD--TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAK  148 (269)
Q Consensus        82 -----------~~Dls~~~~~~~~~~~~~~~~~~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  148 (269)
                                 .+|+++.++++++++++.+.||+||+||||+|....  .++.+++.++|++.+++|+++++.++|+++|
T Consensus        80 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~  159 (329)
T d1uh5a_          80 NDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVN  159 (329)
T ss_dssp             GGCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred             cccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHh
Confidence                       236778888999999999999999999999997653  5788999999999999999999999999999


Q ss_pred             HHHhCCCCeEEEEcCCccccCCCC-ChhhHHhHHHHHHHHHHHHHHhcc-CCeEEEEEecCCccCCcccc----------
Q 024338          149 IMMKKKKGRIINIASVVGLVGNIG-QANYSAAKAGVIGLTKTVAKEYAS-RNINVNAIAPGFIASDMTAK----------  216 (269)
Q Consensus       149 ~l~~~~~~~iv~isS~~~~~~~~~-~~~Y~~sK~al~~~~~~la~e~~~-~gi~v~~v~pG~v~t~~~~~----------  216 (269)
                      +|.  +.|+||++||..+..+.|+ ...|++||+++++|++++|.|+++ .|||||+|+||+++|+..+.          
T Consensus       160 ~m~--~~GsIv~iss~~~~~~~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T~a~~~i~g~~~~~~~  237 (329)
T d1uh5a_         160 IMK--PQSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYEN  237 (329)
T ss_dssp             GEE--EEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCTTGGGCC--------
T ss_pred             hcc--cccccccceeehhcccccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccchhhhcccchhhhhhh
Confidence            994  4689999999999999887 568999999999999999999986 59999999999999943221          


Q ss_pred             -----------------------------------cChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEE
Q 024338          217 -----------------------------------LGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL  261 (269)
Q Consensus       217 -----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i  261 (269)
                                                         ..+...+...+..|++++.+|+|+|++++||+ ++.++|+|||+|
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~~~pedvA~~v~fLa-Sd~s~~iTGq~i  316 (329)
T d1uh5a_         238 NTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLL-SRESRAITGQTI  316 (329)
T ss_dssp             ----------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHH-SGGGTTCCSCEE
T ss_pred             hhhhhhccccccccccccccccccchhhhhhhcccchHHHHHHHhccCCCCCCcCHHHHHHHHHHHh-CchhCCccCCeE
Confidence                                               11345566777889999999999999999999 678899999999


Q ss_pred             EecCCcc
Q 024338          262 TIDGGMV  268 (269)
Q Consensus       262 ~~dgg~~  268 (269)
                      .||||+.
T Consensus       317 ~VDGG~~  323 (329)
T d1uh5a_         317 YVDNGLN  323 (329)
T ss_dssp             EESTTGG
T ss_pred             EECCCcc
Confidence            9999984

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=6e-43  Score=288.55  Aligned_cols=227  Identities=33%  Similarity=0.504  Sum_probs=196.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTV  105 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i  105 (269)
                      .|++|||||++|||+++|+.|+++|++|+++ +|+++            ..+.....+|+++......+..+..+.. ..
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~-~~~~~------------~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~   66 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVL-DLRRE------------GEDLIYVEGDVTREEDVRRAVARAQEEA-PL   66 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEE-ESSCC------------SSSSEEEECCTTCHHHHHHHHHHHHHHS-CE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEE-ECCcc------------cccceEeeccccchhhhHHHHHhhhccc-cc
Confidence            4999999999999999999999999999985 66542            2355678999999999999988887765 45


Q ss_pred             cEEEEccCCCCC----CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHH------HhCCCCeEEEEcCCccccCCCCChh
Q 024338          106 DILINNAGITRD----TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIM------MKKKKGRIINIASVVGLVGNIGQAN  175 (269)
Q Consensus       106 d~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l------~~~~~~~iv~isS~~~~~~~~~~~~  175 (269)
                      +.++++++....    ......+.+.+++.+++|+.+.+.+++.+.+.+      .+++.|+||++||..+..+.++...
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~~  146 (241)
T d1uaya_          67 FAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAA  146 (241)
T ss_dssp             EEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHH
T ss_pred             cchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCCchh
Confidence            566666664322    344567889999999999999999999999985      3456799999999999999999999


Q ss_pred             hHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCC-CCCCCHHHHHHHHHHhccCCCCC
Q 024338          176 YSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPL-GRYGQPEEVAGLVEFLALNPAAG  254 (269)
Q Consensus       176 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~~~l~~~~~~~  254 (269)
                      |++||+|+.+|+++++.|++++|||||+|+||+++|++.....+...+......|+ +++.+|+|+|++++||+++   +
T Consensus       147 Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~R~g~pedvA~~v~fL~s~---~  223 (241)
T d1uaya_         147 YAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFPPRLGRPEEYAALVLHILEN---P  223 (241)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHHHHHTTCCSSCSCCCHHHHHHHHHHHHHC---T
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhhhhHHHHHHhcCCCCCCCcCHHHHHHHHHHHHhC---C
Confidence            99999999999999999999999999999999999999888877777777676665 8999999999999999963   5


Q ss_pred             CccccEEEecCCccC
Q 024338          255 YITGQVLTIDGGMVM  269 (269)
Q Consensus       255 ~~~G~~i~~dgg~~~  269 (269)
                      |+|||+|.||||++|
T Consensus       224 ~iTG~~i~VDGG~~m  238 (241)
T d1uaya_         224 MLNGEVVRLDGALRM  238 (241)
T ss_dssp             TCCSCEEEESTTCCC
T ss_pred             CCCCCEEEECCcccC
Confidence            999999999999986

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=100.00  E-value=6.4e-42  Score=286.36  Aligned_cols=240  Identities=31%  Similarity=0.501  Sum_probs=200.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHc-CCcEEEEEccCC----CHHHHHHHHHHHHHh
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS-GGQALTFGGDVS----KEADVESMIKTAVDA  101 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dls----~~~~~~~~~~~~~~~  101 (269)
                      .|+|||||++|||+++|++|+++|++|+++..++++..+++.+++... +.+.....+|+.    +.+.++++++++.++
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA   81 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence            589999999999999999999999999996555566677888888665 456666666554    467788888999999


Q ss_pred             cCCccEEEEccCCCCCCccc-----------CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-----CCCCeEEEEcCCc
Q 024338          102 WGTVDILINNAGITRDTLLM-----------RMKKSQWQDVIDLNLTGVFLCTQAAAKIMMK-----KKKGRIINIASVV  165 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~-----------~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-----~~~~~iv~isS~~  165 (269)
                      +|+||++|||||+..+.++.           +.....+...+..|..+.+...+...+.+..     ...+.+++++|..
T Consensus        82 ~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (266)
T d1mxha_          82 FGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAM  161 (266)
T ss_dssp             HSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGG
T ss_pred             hCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhcc
Confidence            99999999999987654332           2345567788899999999988888876643     3457899999999


Q ss_pred             cccCCCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCC-CCHHHHHHHH
Q 024338          166 GLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRY-GQPEEVAGLV  244 (269)
Q Consensus       166 ~~~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~a~~~  244 (269)
                      +..+.|+...|++||+++++|++++|.|++++|||||+|+||+++|+..  ..++..+...+..|+++. .+|+|+|+++
T Consensus       162 ~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~--~~~~~~~~~~~~~pl~r~~~~peeva~~v  239 (266)
T d1mxha_         162 TDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPA--MPQETQEEYRRKVPLGQSEASAAQIADAI  239 (266)
T ss_dssp             GGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSS--SCHHHHHHHHTTCTTTSCCBCHHHHHHHH
T ss_pred             ccccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEecccc--CCHHHHHHHHhcCCCCCCCCCHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999864  335666777888888654 7999999999


Q ss_pred             HHhccCCCCCCccccEEEecCCccC
Q 024338          245 EFLALNPAAGYITGQVLTIDGGMVM  269 (269)
Q Consensus       245 ~~l~~~~~~~~~~G~~i~~dgg~~~  269 (269)
                      +||+ +++++|+|||+|.+|||+++
T Consensus       240 ~fL~-s~~s~~itG~~i~vDGG~~l  263 (266)
T d1mxha_         240 AFLV-SKDAGYITGTTLKVDGGLIL  263 (266)
T ss_dssp             HHHH-SGGGTTCCSCEEEESTTGGG
T ss_pred             HHHh-CchhCCccCCeEEECccHhh
Confidence            9999 67888999999999999975

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-43  Score=297.44  Aligned_cols=221  Identities=25%  Similarity=0.359  Sum_probs=193.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHc-CCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Q 024338           27 PVAVVTGASRGIGRAVATSLGKA-GCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTV  105 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~-G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i  105 (269)
                      +++|||||++|||+++|++|+++ |++|++ ++|+.+++++..+++++.+.++.++.||++|.++++++++++.+++++|
T Consensus         4 rVAlVTGas~GIG~a~A~~la~~~g~~Vi~-~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~i   82 (275)
T d1wmaa1           4 HVALVTGGNKGIGLAIVRDLCRLFSGDVVL-TARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGL   82 (275)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHHSSSEEEE-EESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred             eEEEECCCCCHHHHHHHHHHHHhCCCEEEE-EECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCCc
Confidence            56699999999999999999986 888877 6999999999999999988899999999999999999999999999999


Q ss_pred             cEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCC---------------
Q 024338          106 DILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGN---------------  170 (269)
Q Consensus       106 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~---------------  170 (269)
                      |+||||||+....+..+.+.++|+..+++|+++++.+++.++|.|+  +.|+||++||+.+..+.               
T Consensus        83 DiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~--~~g~ivnisS~~~~~~~~~~~~y~~~k~~~~~  160 (275)
T d1wmaa1          83 DVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIK--PQGRVVNVSSIMSVRALKSCSPELQQKFRSET  160 (275)
T ss_dssp             EEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEE--EEEEEEEECCHHHHHHHHTSCHHHHHHHHCSS
T ss_pred             EEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--hcCCcccccccceeccccccchhhhhhhcccc
Confidence            9999999998888888888999999999999999999999999994  45899999998764321               


Q ss_pred             --------------------------CCChhhHHhHHHHHHHHHHHHHHhcc----CCeEEEEEecCCccCCcccccChH
Q 024338          171 --------------------------IGQANYSAAKAGVIGLTKTVAKEYAS----RNINVNAIAPGFIASDMTAKLGED  220 (269)
Q Consensus       171 --------------------------~~~~~Y~~sK~al~~~~~~la~e~~~----~gi~v~~v~pG~v~t~~~~~~~~~  220 (269)
                                                .+...|++||+++.+|++.+++|+++    .||+||+|+||+++|++..+..  
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~~~~--  238 (275)
T d1wmaa1         161 ITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPKA--  238 (275)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCTTC--
T ss_pred             cchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcccCcc--
Confidence                                      23356999999999999999999865    4999999999999999865432  


Q ss_pred             HHHHHHhcCCCCCCCCHHHHHHHHHHhcc-CCCCCCccccEEEecCC
Q 024338          221 LEKKILEKIPLGRYGQPEEVAGLVEFLAL-NPAAGYITGQVLTIDGG  266 (269)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~a~~~~~l~~-~~~~~~~~G~~i~~dgg  266 (269)
                                   ..+|+|+|++++|++. +++..+.+|+.+. |.+
T Consensus       239 -------------~~~pee~A~~~~~~a~~~~~~~~~~G~~~~-~~~  271 (275)
T d1wmaa1         239 -------------TKSPEEGAETPVYLALLPPDAEGPHGQFVS-EKR  271 (275)
T ss_dssp             -------------SBCHHHHTHHHHHHHSCCTTCCCCCSCEEE-TTE
T ss_pred             -------------cCCHHHHHHHHHHHHcCChhhcCCCeEEEE-CCE
Confidence                         2379999999999974 4566778999887 543

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=8.1e-43  Score=296.49  Aligned_cols=245  Identities=22%  Similarity=0.272  Sum_probs=198.8

Q ss_pred             ccCCCCCCEEEEeCCCC--chHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHc---------C--Cc-EEEEEcc-
Q 024338           20 AAQNVEAPVAVVTGASR--GIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS---------G--GQ-ALTFGGD-   84 (269)
Q Consensus        20 ~~~~~~~k~vlItGas~--giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~---------~--~~-~~~~~~D-   84 (269)
                      ++++|+||++|||||++  |||+++|+.|+++|++|+++ .|++.............         .  .. .....+| 
T Consensus         2 ~~~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (297)
T d1d7oa_           2 LPIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVG-TWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDA   80 (297)
T ss_dssp             CCCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEE-EEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECT
T ss_pred             CCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEE-eCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhh
Confidence            57899999999999876  99999999999999999884 66554332222211110         0  01 1223333 


Q ss_pred             -------------------CCCHHHHHHHHHHHHHhcCCccEEEEccCCCC--CCcccCCCHHHHHHHHHHHhHHHHHHH
Q 024338           85 -------------------VSKEADVESMIKTAVDAWGTVDILINNAGITR--DTLLMRMKKSQWQDVIDLNLTGVFLCT  143 (269)
Q Consensus        85 -------------------ls~~~~~~~~~~~~~~~~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~  143 (269)
                                         .++..+++++++++.++||+||+||||||...  ..++.+.+.++|++.+++|+.+++.++
T Consensus        81 ~~~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~  160 (297)
T d1d7oa_          81 VFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLL  160 (297)
T ss_dssp             TCCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             hccccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhh
Confidence                               34556778999999999999999999999754  367889999999999999999999999


Q ss_pred             HHHHHHHHhCCCCeEEEEcCCccc-cCCCCChhhHHhHHHHHHHHHHHHHHhc-cCCeEEEEEecCCccCCcccccC--h
Q 024338          144 QAAAKIMMKKKKGRIINIASVVGL-VGNIGQANYSAAKAGVIGLTKTVAKEYA-SRNINVNAIAPGFIASDMTAKLG--E  219 (269)
Q Consensus       144 ~~~~~~l~~~~~~~iv~isS~~~~-~~~~~~~~Y~~sK~al~~~~~~la~e~~-~~gi~v~~v~pG~v~t~~~~~~~--~  219 (269)
                      ++++|.+.  +.++++++++.... ...+....|+++|+++..+++.++.|++ +.|||||+|+||+++|++.....  +
T Consensus       161 ~~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~~~~  238 (297)
T d1d7oa_         161 SHFLPIMN--PGGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFID  238 (297)
T ss_dssp             HHHGGGEE--EEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHH
T ss_pred             hHHHHHhh--cCCcceeeeehhhcccccccccceecccccccccccccchhccccceEEecccccccccchhhhhccCCH
Confidence            99999874  34566666666555 4457788999999999999999999996 57999999999999999987643  4


Q ss_pred             HHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEEEecCCcc
Q 024338          220 DLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMV  268 (269)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg~~  268 (269)
                      +..+...+..|++++.+|+|+|++++||+ +++++|+|||+|.+|||+.
T Consensus       239 ~~~~~~~~~~PlgR~~~peevA~~v~fL~-S~~a~~itGq~i~vDGG~s  286 (297)
T d1d7oa_         239 TMIEYSYNNAPIQKTLTADEVGNAAAFLV-SPLASAITGATIYVDNGLN  286 (297)
T ss_dssp             HHHHHHHHHSSSCCCBCHHHHHHHHHHHT-SGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHhCCCCCCCCCHHHHHHHHHHHh-CchhcCCcCceEEECcCHh
Confidence            56677788899999999999999999999 6788999999999999984

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=100.00  E-value=4e-42  Score=289.03  Aligned_cols=241  Identities=17%  Similarity=0.234  Sum_probs=194.5

Q ss_pred             CCCCCEEEEeCCCC--chHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           23 NVEAPVAVVTGASR--GIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        23 ~~~~k~vlItGas~--giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      .|+||++|||||+|  |||+++|+.|+++|++|+++ +|+++ +++..+++.+.+....+..+|++++++++++++++.+
T Consensus         2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~-~r~~~-~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~   79 (274)
T d2pd4a1           2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFT-YLNES-LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKK   79 (274)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEE-ESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEE-eCCHH-HHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHH
Confidence            37899999999875  99999999999999999984 67754 3344556666666777899999999999999999999


Q ss_pred             hcCCccEEEEccCCCCCCc----ccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhh
Q 024338          101 AWGTVDILINNAGITRDTL----LMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANY  176 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y  176 (269)
                      .++++|++|||+|......    ......+.+...+.++..+.....+...+.+  +..+.|+++|+.....+.+....|
T Consensus        80 ~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~s~~~~~~~~~~~~~y  157 (274)
T d2pd4a1          80 DLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLL--NNGASVLTLSYLGSTKYMAHYNVM  157 (274)
T ss_dssp             HTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE--EEEEEEEEEECGGGTSBCTTCHHH
T ss_pred             HcCCCCeEEeecccccccccccccccccchhhhhhhcccccccccccccccccc--ccCcceeeecccccccccccchhh
Confidence            9999999999999865433    2334444455555555554444444443322  334557777777778888899999


Q ss_pred             HHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC--hHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCC
Q 024338          177 SAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG--EDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAG  254 (269)
Q Consensus       177 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~  254 (269)
                      +++|+++.+++++++.|++++|||||+|+||+++|++.....  +..........|.+++.+|+|+|+++.||+ ++.++
T Consensus       158 ~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedIA~~v~fL~-S~~s~  236 (274)
T d2pd4a1         158 GLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLL-SSLSS  236 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHH-SGGGT
T ss_pred             hHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchHHHHHHHhhhhhccCCcCHHHHHHHHHHHh-ChhhC
Confidence            999999999999999999999999999999999999876654  344455667789999999999999999999 56889


Q ss_pred             CccccEEEecCCcc
Q 024338          255 YITGQVLTIDGGMV  268 (269)
Q Consensus       255 ~~~G~~i~~dgg~~  268 (269)
                      ++|||+|.+||||.
T Consensus       237 ~itG~~i~vDGG~~  250 (274)
T d2pd4a1         237 GVSGEVHFVDAGYH  250 (274)
T ss_dssp             TCCSCEEEESTTGG
T ss_pred             CCcCceEEECCChh
Confidence            99999999999985

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=1.3e-41  Score=282.01  Aligned_cols=225  Identities=18%  Similarity=0.295  Sum_probs=184.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHH---HcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH--
Q 024338           26 APVAVVTGASRGIGRAVATSLG---KAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD--  100 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~---~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~--  100 (269)
                      .|+||||||++|||+++|++|+   ++|++|++ .+|+++.++++.+ +.+.+.++.++.||++|+++++++++++.+  
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~-~~r~~~~~~~~~~-~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~   79 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFT-TCRNREQAKELED-LAKNHSNIHILEIDLRNFDAYDKLVADIEGVT   79 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEE-EESCTTSCHHHHH-HHHHCTTEEEEECCTTCGGGHHHHHHHHHHHH
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEE-EECCHHHHHHHHH-HHhcCCcEEEEEEEeccHHHHHHHHhhhHHHh
Confidence            4899999999999999999996   47899888 5788887777654 444467899999999999999999999854  


Q ss_pred             hcCCccEEEEccCCCCC-CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-----------CCCeEEEEcCCcccc
Q 024338          101 AWGTVDILINNAGITRD-TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKK-----------KKGRIINIASVVGLV  168 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-----------~~~~iv~isS~~~~~  168 (269)
                      .++++|+||||||+... .++.+.+.++|++.+++|+.+++.+++.++|+|+++           ..+++|+++|..+..
T Consensus        80 ~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~  159 (248)
T d1snya_          80 KDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSI  159 (248)
T ss_dssp             GGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCS
T ss_pred             hcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhcccccccccccccccccccccccc
Confidence            67899999999998655 467889999999999999999999999999999753           468999999998764


Q ss_pred             ---CCCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 024338          169 ---GNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVE  245 (269)
Q Consensus       169 ---~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~  245 (269)
                         +.++...|++||+|+.+|+++++.|+++.||+|++|+||+++|++.....+           +    .+++.++.++
T Consensus       160 ~~~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m~~~~~~-----------~----~~~~~~~~i~  224 (248)
T d1snya_         160 QGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSSAP-----------L----DVPTSTGQIV  224 (248)
T ss_dssp             TTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCTTCS-----------B----CHHHHHHHHH
T ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCcccccCC-----------C----CchHHHHHHH
Confidence               456678999999999999999999999999999999999999998764322           1    2333333333


Q ss_pred             HhccCCCCCCccccEEEecCCcc
Q 024338          246 FLALNPAAGYITGQVLTIDGGMV  268 (269)
Q Consensus       246 ~l~~~~~~~~~~G~~i~~dgg~~  268 (269)
                      .++... ....+|++|.+||+.+
T Consensus       225 ~~i~~l-~~~~tG~~i~~dG~~i  246 (248)
T d1snya_         225 QTISKL-GEKQNGGFVNYDGTPL  246 (248)
T ss_dssp             HHHHHC-CGGGTTCEECTTSCBC
T ss_pred             HHHHhc-CccCCCcEEEECCeEc
Confidence            332221 1236899999999753

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=100.00  E-value=9.2e-41  Score=279.74  Aligned_cols=238  Identities=17%  Similarity=0.174  Sum_probs=197.2

Q ss_pred             CCCCCEEEEeCC--CCchHHHHHHHHHHcCCcEEEEecCCHHHH-HHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHH
Q 024338           23 NVEAPVAVVTGA--SRGIGRAVATSLGKAGCKVLVNYARSSKEA-EEVCKEIEASGGQALTFGGDVSKEADVESMIKTAV   99 (269)
Q Consensus        23 ~~~~k~vlItGa--s~giG~~~a~~l~~~G~~v~i~~~r~~~~~-~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~   99 (269)
                      -|+||++|||||  ++|||+++|++|+++|++|+++ .|+.++. +++.++   .+.+...+.||++++++++++++++.
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~-~~~~~~~~~~~~~~---~~~~~~~~~~dv~~~~~~~~~~~~v~   78 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLT-GFDRLRLIQRITDR---LPAKAPLLELDVQNEEHLASLAGRVT   78 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEE-ECSCHHHHHHHHTT---SSSCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEE-eCChHHHHHHHHHH---cCCceeeEeeecccccccccccchhh
Confidence            478999999995  5799999999999999999885 6766544 333332   35667789999999999999999997


Q ss_pred             Hhc---CCccEEEEccCCCCC-----CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCC
Q 024338          100 DAW---GTVDILINNAGITRD-----TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNI  171 (269)
Q Consensus       100 ~~~---~~id~li~~ag~~~~-----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~  171 (269)
                      +.+   +++|++|||+|....     .++.+.+.+++...+..|+...+...+...+.+   ..+.+++++|.....+.|
T Consensus        79 ~~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~~s~~~~~~~p  155 (268)
T d2h7ma1          79 EAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIM---NPGGSIVGMDFDPSRAMP  155 (268)
T ss_dssp             HHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE---EEEEEEEEEECCCSSCCT
T ss_pred             hccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhc---ccccccccccccccccCc
Confidence            765   579999999997532     356778899999999999999998888877654   234566677778888889


Q ss_pred             CChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC------------hHHHHHHHhcCCCCC-CCCHH
Q 024338          172 GQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG------------EDLEKKILEKIPLGR-YGQPE  238 (269)
Q Consensus       172 ~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~------------~~~~~~~~~~~~~~~-~~~~~  238 (269)
                      +...|+++|+|+.+|+++++.|++++|||||+|+||+++|++.....            +...+...+..|+++ +.+|+
T Consensus       156 ~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~rr~~~p~  235 (268)
T d2h7ma1         156 AYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDAT  235 (268)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTCCH
T ss_pred             ccchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCCCCCCCCHH
Confidence            99999999999999999999999999999999999999998754221            123345556778765 89999


Q ss_pred             HHHHHHHHhccCCCCCCccccEEEecCCcc
Q 024338          239 EVAGLVEFLALNPAAGYITGQVLTIDGGMV  268 (269)
Q Consensus       239 ~~a~~~~~l~~~~~~~~~~G~~i~~dgg~~  268 (269)
                      |+|+++.||+ ++.++|+|||+|.||||+.
T Consensus       236 dva~~v~fL~-Sd~a~~iTG~~i~vDGG~~  264 (268)
T d2h7ma1         236 PVAKTVCALL-SDWLPATTGDIIYADGGAH  264 (268)
T ss_dssp             HHHHHHHHHH-SSSCTTCCSEEEEESTTGG
T ss_pred             HHHHHHHHHh-CchhcCccCCEEEECcCcc
Confidence            9999999999 6788999999999999984

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=2.5e-40  Score=274.47  Aligned_cols=223  Identities=21%  Similarity=0.263  Sum_probs=178.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCc--EEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCK--VLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~--v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      |+.|+||||||++|||+++|++|+++|+.  |++ .+|+.++++++.++   .+.++.++.+|++|.++++++++++.+.
T Consensus         1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~-~~R~~~~~~~l~~~---~~~~~~~~~~Dvs~~~~v~~~~~~i~~~   76 (250)
T d1yo6a1           1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIA-TARDVEKATELKSI---KDSRVHVLPLTVTCDKSLDTFVSKVGEI   76 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEE-EESSGGGCHHHHTC---CCTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEE-EeCCHHHHHHHHHh---hCCceEEEEEecCCHHHHHHHHHHHHHH
Confidence            35699999999999999999999999974  444 68888777654432   3568999999999999999999999998


Q ss_pred             cC--CccEEEEccCCCCC-CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-----------CCCeEEEEcCCccc
Q 024338          102 WG--TVDILINNAGITRD-TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKK-----------KKGRIINIASVVGL  167 (269)
Q Consensus       102 ~~--~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-----------~~~~iv~isS~~~~  167 (269)
                      ++  +||+||||||+... .++.+.+.++|++.+++|+.+++.+++.++|+|+++           ..+++++++|..+.
T Consensus        77 ~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~  156 (250)
T d1yo6a1          77 VGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGS  156 (250)
T ss_dssp             HGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGC
T ss_pred             hCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceecccccccccccc
Confidence            76  49999999998654 677889999999999999999999999999999753           24789999987766


Q ss_pred             cCCC-------CChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHH
Q 024338          168 VGNI-------GQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEV  240 (269)
Q Consensus       168 ~~~~-------~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (269)
                      ...+       +..+|++||+|+.+|+++|+.|+++.||+|++|+||+++|++.....               ..+|++.
T Consensus       157 ~~~~~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~~~~---------------~~~~e~~  221 (250)
T d1yo6a1         157 ITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKNA---------------ALTVEQS  221 (250)
T ss_dssp             STTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC----------------------------HHH
T ss_pred             ccCCcccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCCCCC---------------CCCHHHH
Confidence            5433       34579999999999999999999999999999999999999865321               2378999


Q ss_pred             HHHHHHhccCCCCCCccccEEEecCC
Q 024338          241 AGLVEFLALNPAAGYITGQVLTIDGG  266 (269)
Q Consensus       241 a~~~~~l~~~~~~~~~~G~~i~~dgg  266 (269)
                      ++.++..+.... ...+|+.+..||.
T Consensus       222 a~~~~~~~~~~~-~~~sG~f~~~~g~  246 (250)
T d1yo6a1         222 TAELISSFNKLD-NSHNGRFFMRNLK  246 (250)
T ss_dssp             HHHHHHHHTTCC-GGGTTCEEETTEE
T ss_pred             HHHHHHHHhcCC-CCCCeEEECCCCe
Confidence            999988885443 3578999988764

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-40  Score=277.06  Aligned_cols=216  Identities=25%  Similarity=0.301  Sum_probs=191.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHc-CCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS-GGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      |+||++|||||++|||+++|+.|+++|++|++ ++|+.+.++++.+++.+. +.....+.+|+++.++++..++++.+.+
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil-~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   90 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVV-TARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM   90 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHh
Confidence            79999999999999999999999999999988 589999999998887654 6678889999999999999999999999


Q ss_pred             CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHH
Q 024338          103 GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAG  182 (269)
Q Consensus       103 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  182 (269)
                      +.+|+++||||.....++.+.+.+++++.+++|+.+++.+++.++|.|+ +++|+||++||..+..+.|+...|++||+|
T Consensus        91 g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~-~~~G~ii~isS~~~~~~~p~~~~Y~asKaa  169 (269)
T d1xu9a_          91 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLK-QSNGSIVVVSSLAGKVAYPMVAAYSASKFA  169 (269)
T ss_dssp             TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEEEGGGTSCCTTCHHHHHHHHH
T ss_pred             CCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHH-hcCCcceEeccchhcCCCCCchHHHHHHHH
Confidence            9999999999998888889999999999999999999999999999996 456999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcc--CCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhcc
Q 024338          183 VIGLTKTVAKEYAS--RNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLAL  249 (269)
Q Consensus       183 l~~~~~~la~e~~~--~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~  249 (269)
                      +++|+++|+.|+++  .||+|++|+||+++|++.....+..        +.....+|+++|..++....
T Consensus       170 l~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~~~~~~~--------~~~~~~~~e~~a~~i~~~~~  230 (269)
T d1xu9a_         170 LDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGI--------VHMQAAPKEECALEIIKGGA  230 (269)
T ss_dssp             HHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSCGG--------GGGGCBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHHHhccCC--------ccccCCCHHHHHHHHHHHhh
Confidence            99999999999874  4799999999999999754322111        11123478999988887653

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.1e-39  Score=268.17  Aligned_cols=217  Identities=14%  Similarity=0.113  Sum_probs=182.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC-
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG-  103 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~-  103 (269)
                      +||++|||||++|||+++|+.|+++|++|+++ ++++..          .........+|.++.++.+.+.+++.+.++ 
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~-~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASI-DVVENE----------EASASVIVKMTDSFTEQADQVTAEVGKLLGD   69 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEE-ESSCCT----------TSSEEEECCCCSCHHHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE-eCCccc----------cccccceeecccCcHHHHHHHHHHHHHHhCC
Confidence            58999999999999999999999999999885 444321          123455678899989999988888877654 


Q ss_pred             -CccEEEEccCCCCC-CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHH
Q 024338          104 -TVDILINNAGITRD-TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKA  181 (269)
Q Consensus       104 -~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  181 (269)
                       ++|+||||||.... ..+.+.+.++|++.+++|+.+++.+++.++|+|+  ++|+||++||..+..+.++...|++||+
T Consensus        70 ~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~--~~G~Iv~isS~~~~~~~~~~~~Y~asKa  147 (236)
T d1dhra_          70 QKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLK--EGGLLTLAGAKAALDGTPGMIGYGMAKG  147 (236)
T ss_dssp             CCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEE--EEEEEEEECCGGGGSCCTTBHHHHHHHH
T ss_pred             CCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcc--cccceeEEccHHHcCCccCCcccHHHHH
Confidence             69999999996544 4566777899999999999999999999999994  4689999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhc--cCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCcccc
Q 024338          182 GVIGLTKTVAKEYA--SRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQ  259 (269)
Q Consensus       182 al~~~~~~la~e~~--~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~  259 (269)
                      |+++|+++|+.|++  +.||+||+|+||+++||+.+...+        ..+..++.+|+++|+.+.+|+ +++..+++|+
T Consensus       148 al~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~~~~~--------~~~~~~~~~pe~va~~~~~l~-s~~~~~i~G~  218 (236)
T d1dhra_         148 AVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMP--------EADFSSWTPLEFLVETFHDWI-TGNKRPNSGS  218 (236)
T ss_dssp             HHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHST--------TSCGGGSEEHHHHHHHHHHHH-TTTTCCCTTC
T ss_pred             HHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcchhhCc--------cchhhcCCCHHHHHHHHHHHh-CCCccCCCCC
Confidence            99999999999998  579999999999999997543221        123345668999999999999 5577789998


Q ss_pred             EEEe
Q 024338          260 VLTI  263 (269)
Q Consensus       260 ~i~~  263 (269)
                      .|.|
T Consensus       219 ~i~v  222 (236)
T d1dhra_         219 LIQV  222 (236)
T ss_dssp             EEEE
T ss_pred             eEEE
Confidence            7765

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=2.3e-38  Score=260.25  Aligned_cols=216  Identities=16%  Similarity=0.140  Sum_probs=180.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh--cCC
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA--WGT  104 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~--~~~  104 (269)
                      ++||||||++|||+++|++|+++|++|+++ +|++...          ......+.+|..+.++.....+.+...  +++
T Consensus         3 gkVlITGas~GIG~aia~~l~~~G~~V~~~-~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   71 (235)
T d1ooea_           3 GKVIVYGGKGALGSAILEFFKKNGYTVLNI-DLSANDQ----------ADSNILVDGNKNWTEQEQSILEQTASSLQGSQ   71 (235)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTEEEEEE-ESSCCTT----------SSEEEECCTTSCHHHHHHHHHHHHHHHHTTCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEE-ECCchhc----------ccccceeccccCchhHHHHHHHHHHHHhcCCC
Confidence            457999999999999999999999999885 6654321          234556778999888888877777774  578


Q ss_pred             ccEEEEccCCCCC-CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHH
Q 024338          105 VDILINNAGITRD-TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGV  183 (269)
Q Consensus       105 id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al  183 (269)
                      ||+||||||.... .+..+.+.+.|+.++++|+.+++.+++.++|+|+  ++|+||++||..+..+.|+...|++||+|+
T Consensus        72 iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~--~~g~Iv~isS~~~~~~~~~~~~Y~asKaal  149 (235)
T d1ooea_          72 VDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLK--PGGLLQLTGAAAAMGPTPSMIGYGMAKAAV  149 (235)
T ss_dssp             EEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEE--EEEEEEEECCGGGGSCCTTBHHHHHHHHHH
T ss_pred             eeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccc--cceEEEEeccHHhcCCcccccchHHHHHHH
Confidence            9999999997654 3455666788999999999999999999999994  458999999999999999999999999999


Q ss_pred             HHHHHHHHHHhc--cCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEE
Q 024338          184 IGLTKTVAKEYA--SRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVL  261 (269)
Q Consensus       184 ~~~~~~la~e~~--~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i  261 (269)
                      ++|+++|+.|++  +.+|+|++|+||+++|++.+...+        ..+..++.+|+++++.+++++.++...+++|+.+
T Consensus       150 ~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~~~~--------~~~~~~~~~~~~va~~~~~~l~~~~~~~~tG~~i  221 (235)
T d1ooea_         150 HHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMP--------NADHSSWTPLSFISEHLLKWTTETSSRPSSGALL  221 (235)
T ss_dssp             HHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHST--------TCCGGGCBCHHHHHHHHHHHHHCGGGCCCTTCEE
T ss_pred             HHHHHHHHHHhccCCCceEEEEEecCcCcCcchhhhCc--------CCccccCCCHHHHHHHHHHHhcCccccCCCceEE
Confidence            999999999998  468999999999999997654322        1233456689999999986666777788999999


Q ss_pred             Ee
Q 024338          262 TI  263 (269)
Q Consensus       262 ~~  263 (269)
                      .+
T Consensus       222 ~v  223 (235)
T d1ooea_         222 KI  223 (235)
T ss_dssp             EE
T ss_pred             EE
Confidence            88

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=2.5e-37  Score=257.09  Aligned_cols=216  Identities=25%  Similarity=0.378  Sum_probs=165.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc-CCc
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW-GTV  105 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~-~~i  105 (269)
                      |++|||||++|||+++|++|+++|++|+++ +|++++                 ..+|+++.+..+....+...+. +.+
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~-~~~~~~-----------------~~~d~~~~~~~~~~~~~~~~~~~~~i   63 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGI-DIRDAE-----------------VIADLSTAEGRKQAIADVLAKCSKGM   63 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ESSSSS-----------------EECCTTSHHHHHHHHHHHHTTCTTCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEE-ECChHH-----------------HHHHhcCHHHHHHHHHHHHHHhCCCC
Confidence            899999999999999999999999999885 454321                 4579999998888777766554 579


Q ss_pred             cEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcccc-----------------
Q 024338          106 DILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLV-----------------  168 (269)
Q Consensus       106 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~-----------------  168 (269)
                      |++|||||+....       +.+.....+|+.+...+.+...+.+.+.......++++.....                 
T Consensus        64 d~lv~~Ag~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  136 (257)
T d1fjha_          64 DGLVLCAGLGPQT-------KVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEE  136 (257)
T ss_dssp             SEEEECCCCCTTC-------SSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCH
T ss_pred             cEEEEcCCCCCcH-------HHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcE
Confidence            9999999975432       3578889999999999999999988777667777766643321                 


Q ss_pred             ----------C-CCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccCh--HHHHHHHh-cCCCCCC
Q 024338          169 ----------G-NIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGE--DLEKKILE-KIPLGRY  234 (269)
Q Consensus       169 ----------~-~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~--~~~~~~~~-~~~~~~~  234 (269)
                                + .++..+|++||+|+++|++++|.|++++|||||+|+||+++|++.+....  ...+...+ ..|++++
T Consensus       137 ~~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~PlgR~  216 (257)
T d1fjha_         137 AKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRR  216 (257)
T ss_dssp             HHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CCCSTTSC
T ss_pred             EEEeeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCHHHHHHHHhcCCCCCCC
Confidence                      1 12345699999999999999999999999999999999999998765432  23333333 4699999


Q ss_pred             CCHHHHHHHHHHhccCCCCCCccccEEEecCCcc
Q 024338          235 GQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMV  268 (269)
Q Consensus       235 ~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg~~  268 (269)
                      .+|+|+|+++.||+ +++++|+|||+|.+|||++
T Consensus       217 g~p~eva~~v~fL~-S~~s~~itG~~i~vDGG~t  249 (257)
T d1fjha_         217 AEPSEMASVIAFLM-SPAASYVHGAQIVIDGGID  249 (257)
T ss_dssp             CCTHHHHHHHHHHT-SGGGTTCCSCEEEESTTHH
T ss_pred             cCHHHHHHHHHHHh-CchhCCccCceEEeCCCcc
Confidence            99999999999999 6788999999999999985

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=100.00  E-value=1.1e-32  Score=229.19  Aligned_cols=223  Identities=18%  Similarity=0.193  Sum_probs=174.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCH---HHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSS---KEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~---~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      ++++|||||++|||+++|++|+++|+.++++++|+.   +..+++.++++..+.++.++.||++|.++++++++++.+. 
T Consensus         9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~-   87 (259)
T d2fr1a1           9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD-   87 (259)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT-
T ss_pred             cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcccccc-
Confidence            579999999999999999999999996555567763   4566777888888889999999999999999999988664 


Q ss_pred             CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHH
Q 024338          103 GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAG  182 (269)
Q Consensus       103 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  182 (269)
                      +++|.+|||+|.....++.+.+.++++..+++|+.+.+.+.+.+    ...+.+++|++||+.+..+.+++..|+++|++
T Consensus        88 ~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~----~~~~~~~iv~~SS~a~~~g~~~~~~YaAaka~  163 (259)
T d2fr1a1          88 VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELT----RELDLTAFVLFSSFASAFGAPGLGGYAPGNAY  163 (259)
T ss_dssp             SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHH----TTSCCSEEEEEEEHHHHTCCTTCTTTHHHHHH
T ss_pred             ccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHh----hccCCceEeeecchhhccCCcccHHHHHHHHh
Confidence            58999999999998899999999999999999999998887654    44677899999999999999999999999998


Q ss_pred             HHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCccccEEE
Q 024338          183 VIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLT  262 (269)
Q Consensus       183 l~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~  262 (269)
                      ++.|++.+    +..|+++++|+||++.++.+...   ..........+ ...+|+++++.+..++..++.   ...++.
T Consensus       164 l~~la~~~----~~~Gi~v~~I~pg~~~~~g~~~~---~~~~~~~~~G~-~~~~~~~~~~~l~~~l~~~~~---~~~v~~  232 (259)
T d2fr1a1         164 LDGLAQQR----RSDGLPATAVAWGTWAGSGMAEG---PVADRFRRHGV-IEMPPETACRALQNALDRAEV---CPIVID  232 (259)
T ss_dssp             HHHHHHHH----HHTTCCCEEEEECCBC---------------CTTTTE-ECBCHHHHHHHHHHHHHTTCS---SCEECE
T ss_pred             HHHHHHHH----HhCCCCEEECCCCcccCCccccc---hHHHHHHhcCC-CCCCHHHHHHHHHHHHhCCCc---eEEEEe
Confidence            88776655    45699999999999876533211   11111111111 134799999999998865443   234445


Q ss_pred             ec
Q 024338          263 ID  264 (269)
Q Consensus       263 ~d  264 (269)
                      +|
T Consensus       233 ~d  234 (259)
T d2fr1a1         233 VR  234 (259)
T ss_dssp             EC
T ss_pred             Cc
Confidence            54

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.86  E-value=3.6e-20  Score=159.90  Aligned_cols=221  Identities=14%  Similarity=0.138  Sum_probs=152.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCH-----HHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSS-----KEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~-----~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      |+||||||+|.||.+++++|+++|++|+++ .|..     ...+.+..+......++.++++|++|.++++++++..   
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   77 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGI-KRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV---   77 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEE-CC---------------------CCEEECCCCSSCHHHHHHHHHHH---
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEE-ECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhcc---
Confidence            899999999999999999999999999986 4432     2233333333334568999999999999999999865   


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcccc-----------CC
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLV-----------GN  170 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~-----------~~  170 (269)
                        .+|+++|+|+......    +.++.+..+++|+.++.+++.++...- .++..++|++||...+-           +.
T Consensus        78 --~~d~v~h~aa~~~~~~----~~~~~~~~~~~Nv~gt~nllea~~~~~-~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~  150 (357)
T d1db3a_          78 --QPDEVYNLGAMSHVAV----SFESPEYTADVDAMGTLRLLEAIRFLG-LEKKTRFYQASTSELYGLVQEIPQKETTPF  150 (357)
T ss_dssp             --CCSEEEECCCCCTTTT----TTSCHHHHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEGGGGTTCCSSSBCTTSCC
T ss_pred             --CCCEEEEeecccccch----hhhCHHHHHHHHHHHHHHHHHHHHHhC-CCCCcEEEEEEchhhhCCCCCCCcCCCCCC
Confidence              7899999999865432    234567789999999999888875421 13446899999865321           12


Q ss_pred             CCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC--hHHHH---HHHhcCC----------CCCCC
Q 024338          171 IGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG--EDLEK---KILEKIP----------LGRYG  235 (269)
Q Consensus       171 ~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~--~~~~~---~~~~~~~----------~~~~~  235 (269)
                      .+...|+.||.+.+.+++.++..+   |+.+..+.|+.+.+|......  .....   ....+.+          .+.+.
T Consensus       151 ~P~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~  227 (357)
T d1db3a_         151 YPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWG  227 (357)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCE
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHh---CCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecce
Confidence            245689999999999998888765   789999999999888533222  11111   2222111          11356


Q ss_pred             CHHHHHHHHHHhccCCCCCCccccEEEecCC
Q 024338          236 QPEEVAGLVEFLALNPAAGYITGQVLTIDGG  266 (269)
Q Consensus       236 ~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg  266 (269)
                      .++|++++++.++..+     .|+.+++.+|
T Consensus       228 ~v~D~~~a~~~~~~~~-----~~~~yni~sg  253 (357)
T d1db3a_         228 HAKDYVKMQWMMLQQE-----QPEDFVIATG  253 (357)
T ss_dssp             EHHHHHHHHHHTTSSS-----SCCCEEECCC
T ss_pred             eechHHHHHHHHHhCC-----CCCeEEECCC
Confidence            7999999999887432     3567777554

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.80  E-value=3.4e-19  Score=153.97  Aligned_cols=222  Identities=18%  Similarity=0.164  Sum_probs=159.7

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHH-HHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCcc
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEA-EEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVD  106 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~-~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id  106 (269)
                      .||||||+|.||.+++++|+++|+++++.+++..... ....+.+ ....++.++.+|++|.+.++++++..     .+|
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~d   75 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDI-SESNRYNFEHADICDSAEITRIFEQY-----QPD   75 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTT-TTCTTEEEEECCTTCHHHHHHHHHHH-----CCS
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhh-hhcCCcEEEEccCCCHHHHHHHHHhC-----CCC
Confidence            4899999999999999999999998776444322111 0011111 11357899999999999999888754     799


Q ss_pred             EEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-----CCCCeEEEEcCCccccC------------
Q 024338          107 ILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMK-----KKKGRIINIASVVGLVG------------  169 (269)
Q Consensus       107 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-----~~~~~iv~isS~~~~~~------------  169 (269)
                      +|||+|+......    +.++....+++|+.++..+.+.+...-..     .+..++|++||...+-.            
T Consensus        76 ~VihlAa~~~~~~----~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~  151 (361)
T d1kewa_          76 AVMHLAAESHVDR----SITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVT  151 (361)
T ss_dssp             EEEECCSCCCHHH----HHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSC
T ss_pred             EEEECccccchhh----HHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccC
Confidence            9999998653211    22344678999999999999998876532     23568999999775421            


Q ss_pred             ---------CCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccc--cChHHHHHHHhcCCC---C---
Q 024338          170 ---------NIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAK--LGEDLEKKILEKIPL---G---  232 (269)
Q Consensus       170 ---------~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~--~~~~~~~~~~~~~~~---~---  232 (269)
                               ..+...|+.||.+.+.+++.++..+   |+.+.++.|+.+.+|....  ..+.+......+-++   +   
T Consensus       152 ~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~---~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~g~g~  228 (361)
T d1kewa_         152 LPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGD  228 (361)
T ss_dssp             CCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSC
T ss_pred             CCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEecCceECcCCCcCcHHHHHHHHHHcCCCcEEeCCCC
Confidence                     1234569999999999999888765   7899999999999885432  234455555554433   2   


Q ss_pred             ---CCCCHHHHHHHHHHhccCCCCCCccccEEEecCC
Q 024338          233 ---RYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGG  266 (269)
Q Consensus       233 ---~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg  266 (269)
                         .+..++|+|+++..++..+.    .|+.+++.+|
T Consensus       229 ~~r~~i~v~D~a~ai~~~~~~~~----~~~~~Ni~s~  261 (361)
T d1kewa_         229 QIRDWLYVEDHARALHMVVTEGK----AGETYNIGGH  261 (361)
T ss_dssp             CEEEEEEHHHHHHHHHHHHHHCC----TTCEEEECCC
T ss_pred             eEEeCEEHHHHHHHHHHHHhcCC----CCCeEEECCC
Confidence               24589999999999986543    3678888665

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.79  E-value=6.2e-18  Score=144.77  Aligned_cols=224  Identities=19%  Similarity=0.180  Sum_probs=153.1

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHc--CCcEEEEEccCCCHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS--GGQALTFGGDVSKEADVESMIKTA   98 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dls~~~~~~~~~~~~   98 (269)
                      ..-.+||+||||||+|.||.+++++|+++|++|+.+ .|+......+.......  ......+..|++|.+++.+++.  
T Consensus         6 ~~~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~-vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   82 (342)
T d1y1pa1           6 AVLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGT-ARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK--   82 (342)
T ss_dssp             CSSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT--
T ss_pred             CCCCCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEE-eCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcc--
Confidence            334569999999999999999999999999999885 67776665554433222  3345567789999987777664  


Q ss_pred             HHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCC--------
Q 024338           99 VDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGN--------  170 (269)
Q Consensus        99 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~--------  170 (269)
                           .+|+++|+++.....    .   .....+..|+.++.++++.+..   .+...++|++||..+....        
T Consensus        83 -----~~~~v~~~a~~~~~~----~---~~~~~~~~nv~gt~~ll~~~~~---~~~v~~~i~~SS~~~~~~~~~~~~~~~  147 (342)
T d1y1pa1          83 -----GAAGVAHIASVVSFS----N---KYDEVVTPAIGGTLNALRAAAA---TPSVKRFVLTSSTVSALIPKPNVEGIY  147 (342)
T ss_dssp             -----TCSEEEECCCCCSCC----S---CHHHHHHHHHHHHHHHHHHHHT---CTTCCEEEEECCGGGTCCCCTTCCCCE
T ss_pred             -----cchhhhhhccccccc----c---cccccccchhhhHHHHHHhhhc---ccccccccccccceeeccCCCCCCCcc
Confidence                 789999999864321    1   2345678899998877776643   1346799999997543211        


Q ss_pred             -----------------------CCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC-----hHHH
Q 024338          171 -----------------------IGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG-----EDLE  222 (269)
Q Consensus       171 -----------------------~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~-----~~~~  222 (269)
                                             .+...|+.+|.+.+.+++.++..+. .++++.+++|+.+..|...+..     ..+.
T Consensus       148 ~~e~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~  226 (342)
T d1y1pa1         148 LDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENK-PHFTLNAVLPNYTIGTIFDPETQSGSTSGWM  226 (342)
T ss_dssp             ECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHC-CSSEEEEEEESEEECCCSCTTTCCCHHHHHH
T ss_pred             ccccccccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhcc-cccccceecccceeCCCCCccccccchHHHH
Confidence                                   1223699999999999999888764 4688999999988777432211     1122


Q ss_pred             HHHHhc--------CCCCCCCCHHHHHHHHHHhccCCCCCCccccEEEecCC
Q 024338          223 KKILEK--------IPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGG  266 (269)
Q Consensus       223 ~~~~~~--------~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg  266 (269)
                      ..+.++        ...+.+..++|+|++++.++..+.   ..|+.+...++
T Consensus       227 ~~l~~g~~~~~~~~~~~~~~v~v~Dva~~~i~~l~~~~---~~g~~~~~~~~  275 (342)
T d1y1pa1         227 MSLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVLPQ---IERRRVYGTAG  275 (342)
T ss_dssp             HHHHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHCTT---CCSCEEEECCE
T ss_pred             HHHHcCCcCcccCCccceeeeeHHHHHHHHHHhhcCcc---ccceEEEEcCC
Confidence            222221        122235678999999887775543   35666655443

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.78  E-value=4.2e-21  Score=151.54  Aligned_cols=157  Identities=13%  Similarity=0.172  Sum_probs=113.6

Q ss_pred             ccccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHH
Q 024338           18 NEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKT   97 (269)
Q Consensus        18 ~~~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~   97 (269)
                      .....+++||+++||||++|||+++++.|+++|++|++ +.|+.++++++.+++... .++....+|++|.+++++++  
T Consensus        15 ~~~~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~-~~r~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~--   90 (191)
T d1luaa1          15 KAAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVL-CGRKLDKAQAAADSVNKR-FKVNVTAAETADDASRAEAV--   90 (191)
T ss_dssp             HHTTSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE-EESSHHHHHHHHHHHHHH-HTCCCEEEECCSHHHHHHHT--
T ss_pred             HHcCCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhh-cccchHHHHHHHHHHHhc-cchhhhhhhcccHHHHHHHh--
Confidence            34457999999999999999999999999999999888 699999998888888654 24456889999999887765  


Q ss_pred             HHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCC-CCChhh
Q 024338           98 AVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGN-IGQANY  176 (269)
Q Consensus        98 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~-~~~~~Y  176 (269)
                           +++|+||||||...    ...+.+.|+..++.|+.+.+.....+.+.+... ......+++..+..+. .+...|
T Consensus        91 -----~~iDilin~Ag~g~----~~~~~e~~~~~~~~nv~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~g~~~y  160 (191)
T d1luaa1          91 -----KGAHFVFTAGAIGL----ELLPQAAWQNESSIEIVADYNAQPPLGIGGIDA-TDKGKEYGGKRAFGALGIGGLKL  160 (191)
T ss_dssp             -----TTCSEEEECCCTTC----CCBCHHHHHTCTTCCEEEECCCSSSCSBTTCCT-TCEEEEETTEEEECHHHHHHHHH
T ss_pred             -----cCcCeeeecCcccc----ccCCHHHHHhhhcceeehhHhhHHHHHHHhhhh-ccCcEEecceEEEeccCcCcHHH
Confidence                 48999999999642    346889999999999877665543333222111 1222233322222111 133469


Q ss_pred             HHhHHHHHHHHH
Q 024338          177 SAAKAGVIGLTK  188 (269)
Q Consensus       177 ~~sK~al~~~~~  188 (269)
                      +.+|+++..+++
T Consensus       161 ~~sk~a~~~l~~  172 (191)
T d1luaa1         161 KLHRACIAKLFE  172 (191)
T ss_dssp             HHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHh
Confidence            999999887764

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.78  E-value=3.6e-17  Score=142.44  Aligned_cols=215  Identities=15%  Similarity=0.122  Sum_probs=148.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEec--CC-------------HHHHHHHHHHHH-HcCCcEEEEEccCCCHH
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYA--RS-------------SKEAEEVCKEIE-ASGGQALTFGGDVSKEA   89 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~--r~-------------~~~~~~~~~~l~-~~~~~~~~~~~Dls~~~   89 (269)
                      ||.||||||+|.||.+++++|+++|+.|+++..  |.             .....+....+. ..+.++.++.+|++|.+
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~   80 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE   80 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence            688999999999999999999999999988521  00             001111111221 22567899999999999


Q ss_pred             HHHHHHHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcccc-
Q 024338           90 DVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLV-  168 (269)
Q Consensus        90 ~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~-  168 (269)
                      .++++++..     ++|+|||.|+.... +......+.....+++|+.++.+++.++...   +...++++.||..... 
T Consensus        81 ~l~~~~~~~-----~~d~ViHlAa~~~~-~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~---~~~~~~i~~ss~~~~~~  151 (393)
T d1i24a_          81 FLAESFKSF-----EPDSVVHFGEQRSA-PYSMIDRSRAVYTQHNNVIGTLNVLFAIKEF---GEECHLVKLGTMGEYGT  151 (393)
T ss_dssp             HHHHHHHHH-----CCSEEEECCSCCCH-HHHTSCHHHHHHHHHHHHHHHHHHHHHHHHH---CTTCEEEEECCGGGGCC
T ss_pred             HHHHHHHhh-----cchheecccccccc-ccccccccccccccccccccccHHHHHHHHh---ccccceeeccccccccc
Confidence            999998865     79999999986432 2333455677888999999998888877642   3445677777765432 


Q ss_pred             -----------------------CCCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc--------
Q 024338          169 -----------------------GNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL--------  217 (269)
Q Consensus       169 -----------------------~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~--------  217 (269)
                                             +..+...|+.||.+.+.+++.++.++   ++++..+.|+.+..|.....        
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~---~l~~~~lR~~~v~G~~~~~~~~~~~~~~  228 (393)
T d1i24a_         152 PNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVKTDETEMHEELRN  228 (393)
T ss_dssp             CSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSCCTTGGGSGGGCC
T ss_pred             cccccccccccccccccccccccccccccHHHHHhhhhccccccccccc---ceeeeecccccccCCCcccccccccccc
Confidence                                   12234579999999999998777665   78999999998887642111        


Q ss_pred             -----------ChHHHHHHHhcCCC---------CCCCCHHHHHHHHHHhccCCC
Q 024338          218 -----------GEDLEKKILEKIPL---------GRYGQPEEVAGLVEFLALNPA  252 (269)
Q Consensus       218 -----------~~~~~~~~~~~~~~---------~~~~~~~~~a~~~~~l~~~~~  252 (269)
                                 ...+......+.++         +.+..++|+++++..++..+.
T Consensus       229 ~~~~~~~~~~~i~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~  283 (393)
T d1i24a_         229 RLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPA  283 (393)
T ss_dssp             CCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCC
T ss_pred             ccccccccccchhhhhHHhhcCCeeEEeeecccccccccccchHHHHHHHHHhhc
Confidence                       12233333333222         224568999999999885543

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.76  E-value=1.1e-17  Score=142.94  Aligned_cols=222  Identities=17%  Similarity=0.138  Sum_probs=149.4

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCcEEEEecC--CHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGCKVLVNYAR--SSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTV  105 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~~v~i~~~r--~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i  105 (269)
                      .+|||||+|.||..+++.|+++|++|+++...  .........+..  ...++.++++|++|.+.+.++++..     ++
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~   74 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERL--GGKHPTFVEGDIRNEALMTEILHDH-----AI   74 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHH--HTSCCEEEECCTTCHHHHHHHHHHT-----TC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhh--cCCCCEEEEeecCCHHHHHHHHhcc-----CC
Confidence            39999999999999999999999999885321  111111111222  2457889999999999998888753     79


Q ss_pred             cEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCC------------CCC
Q 024338          106 DILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGN------------IGQ  173 (269)
Q Consensus       106 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~------------~~~  173 (269)
                      |+|||+|+.....    .+.++.+..+++|+.++.++++++..    .+..++|++||...+.+.            .+.
T Consensus        75 d~ViHlAa~~~~~----~~~~~~~~~~~~Nv~gt~nlL~~~~~----~~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~  146 (338)
T d1udca_          75 DTVIHFAGLKAVG----ESVQKPLEYYDNNVNGTLRLISAMRA----ANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQ  146 (338)
T ss_dssp             SEEEECCSCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHHH----HTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCS
T ss_pred             CEEEECCCccchh----hHHhCHHHHHHhHHHHHHHHHHHHHH----hCCCEEEecCcceEEccccccccccccccCCCc
Confidence            9999999965321    12234568899999999988887765    345689999997755322            246


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc--------ChHHH----HHHHhc-CCC---------
Q 024338          174 ANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL--------GEDLE----KKILEK-IPL---------  231 (269)
Q Consensus       174 ~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~--------~~~~~----~~~~~~-~~~---------  231 (269)
                      ..|+.+|.+.+.+......+.  .++.+..+.|+.+.++.....        ...+.    ...... .++         
T Consensus       147 ~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~  224 (338)
T d1udca_         147 SPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPT  224 (338)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSS
T ss_pred             chHHHHHhhhhHHHHHHHhhc--cCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCccc
Confidence            689999999999988776664  468888888888877643211        11122    222111 111         


Q ss_pred             ------CCCCCHHHHHHHHHHhccCCCCCCccccEEEecCCc
Q 024338          232 ------GRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM  267 (269)
Q Consensus       232 ------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg~  267 (269)
                            +.+..++|++.++..+..... ....++++++.++.
T Consensus       225 ~~g~~~rd~i~v~D~~~~~~~~~~~~~-~~~~~~i~Ni~~~~  265 (338)
T d1udca_         225 EDGTGVRDYIHVMDLADGHVVAMEKLA-NKPGVHIYNLGAGV  265 (338)
T ss_dssp             TTSSCEECEEEHHHHHHHHHHHHHHHT-TCCEEEEEEESCSS
T ss_pred             CCCCceeeEEEEeehhhhccccccccc-cccCcceeeecCCC
Confidence                  123468899877666543211 23456888887653

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.73  E-value=3.4e-17  Score=140.32  Aligned_cols=172  Identities=13%  Similarity=0.083  Sum_probs=123.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCcc
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVD  106 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id  106 (269)
                      |+||||||+|.||.+++++|+++|++|+++..............-.....++.++.+|++|.+++++++...     ++|
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~-----~~d   76 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY-----KID   76 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS-----CCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhcc-----CCC
Confidence            899999999999999999999999999885321211111111111112456888999999999999988753     799


Q ss_pred             EEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcccc---------------CCC
Q 024338          107 ILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLV---------------GNI  171 (269)
Q Consensus       107 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~---------------~~~  171 (269)
                      +|||+|+......    ..+.-...+.+|+.++..+++++..    .+..++|++||...+-               +..
T Consensus        77 ~VihlAa~~~~~~----~~~~~~~~~~~N~~~t~~ll~~~~~----~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~  148 (347)
T d1z45a2          77 SVIHFAGLKAVGE----STQIPLRYYHNNILGTVVLLELMQQ----YNVSKFVFSSSATVYGDATRFPNMIPIPEECPLG  148 (347)
T ss_dssp             EEEECCSCCCHHH----HHHSHHHHHHHHHHHHHHHHHHHHH----HTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCC
T ss_pred             EEEEccccccccc----cccCcccccccchhhhHHHHHHHHh----cccceEEeecceeeecCcccCCCCCccccccCCC
Confidence            9999999754221    2233467788999999888888754    4456899999976542               112


Q ss_pred             CChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCC
Q 024338          172 GQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASD  212 (269)
Q Consensus       172 ~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~  212 (269)
                      +...|+.||.+.+.+++.+.... ..++.+..+.|+.+..+
T Consensus       149 p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~~~lR~~~v~g~  188 (347)
T d1z45a2         149 PTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPIGA  188 (347)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEECC
T ss_pred             CCChhHhHHHHHHHHHHHHHHhh-ccCCcEEEEeecceEee
Confidence            45679999999998888776543 34678888877655543

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.73  E-value=4.3e-16  Score=132.93  Aligned_cols=222  Identities=15%  Similarity=0.066  Sum_probs=155.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCC---HHHHHHHHHHH-HHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARS---SKEAEEVCKEI-EASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~---~~~~~~~~~~l-~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      +.|++|||||+|.||.+++++|.++|++|+.+...+   ......+.... .....++.++.+|+.|.........    
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~----   90 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA----   90 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT----
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccc----
Confidence            358999999999999999999999999999864322   22222222211 1113568899999999887665443    


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccC-----------
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVG-----------  169 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~-----------  169 (269)
                         ..+.++|.++.....    ...++....+++|+.++..+++++..    .+..++|++||...+..           
T Consensus        91 ---~~~~v~~~~a~~~~~----~~~~~~~~~~~~Nv~gt~~ll~~~~~----~~~~~~i~~SS~~vyg~~~~~~~~E~~~  159 (341)
T d1sb8a_          91 ---GVDYVLHQAALGSVP----RSINDPITSNATNIDGFLNMLIAARD----AKVQSFTYAASSSTYGDHPGLPKVEDTI  159 (341)
T ss_dssp             ---TCSEEEECCSCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGGTTCCCSSBCTTCC
T ss_pred             ---ccccccccccccccc----ccccCccchhheeehhHHHHHHHHHh----cCCceEEEcccceeeCCCCCCCccCCCC
Confidence               789999988754321    13456778999999999998887754    45679999999875432           


Q ss_pred             CCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc------ChHHHHHHHhcCCC---------CCC
Q 024338          170 NIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL------GEDLEKKILEKIPL---------GRY  234 (269)
Q Consensus       170 ~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~------~~~~~~~~~~~~~~---------~~~  234 (269)
                      ..+...|+.+|.+.+.+++.++...   ++++..+.|+.+.++.....      ..........+.++         +.+
T Consensus       160 ~~p~~~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~  236 (341)
T d1sb8a_         160 GKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDF  236 (341)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECC
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHHh---CCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEE
Confidence            2245789999999999999888765   68899999998887753322      12333444433322         346


Q ss_pred             CCHHHHHHHHHHhccCCCCCCccccEEEecCC
Q 024338          235 GQPEEVAGLVEFLALNPAAGYITGQVLTIDGG  266 (269)
Q Consensus       235 ~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg  266 (269)
                      ..++|++.++..+...+..  ..|+.+.+.++
T Consensus       237 i~v~D~~~a~~~~~~~~~~--~~~~~~~~~~~  266 (341)
T d1sb8a_         237 CYIENTVQANLLAATAGLD--ARNQVYNIAVG  266 (341)
T ss_dssp             EEHHHHHHHHHHHHTCCGG--GCSEEEEESCS
T ss_pred             EEEeccchhhhhhhhcccc--ccceeeeeccc
Confidence            6789999999888754332  45777777654

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.73  E-value=9.2e-17  Score=136.36  Aligned_cols=220  Identities=18%  Similarity=0.130  Sum_probs=142.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCccE
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDI  107 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~  107 (269)
                      .||||||+|.||.+++++|+++|++|+++...+.....+-...+. ...++.++.+|++|.+++.++++..     ++|+
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~-~~~~~~~i~~Di~~~~~l~~~~~~~-----~~d~   75 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLS-SLGNFEFVHGDIRNKNDVTRLITKY-----MPDS   75 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHH-TTCCCEEEECCTTCHHHHHHHHHHH-----CCSE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhh-ccCCcEEEEcccCCHHHHHHHHHhc-----CCce
Confidence            589999999999999999999999998853222222222222232 2467889999999999999988765     7899


Q ss_pred             EEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCC-----------------
Q 024338          108 LINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGN-----------------  170 (269)
Q Consensus       108 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~-----------------  170 (269)
                      |||+|+.....    ...++.+..+++|+.|+.++++++..    .+..+.++.||.....+.                 
T Consensus        76 Vih~aa~~~~~----~~~~~~~~~~~~Nv~gt~nll~~~~~----~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~  147 (338)
T d1orra_          76 CFHLAGQVAMT----TSIDNPCMDFEINVGGTLNLLEAVRQ----YNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVD  147 (338)
T ss_dssp             EEECCCCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHHH----HCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETT
T ss_pred             EEeeccccccc----ccccChHHHHHHHHHHHHHHHHhhhc----ccccccccccccccccccccccccccccccccccc
Confidence            99999875432    12234578899999998888877654    344555555554433221                 


Q ss_pred             -----------CCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCC-----cccccChHHHHHHHh-----cC
Q 024338          171 -----------IGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASD-----MTAKLGEDLEKKILE-----KI  229 (269)
Q Consensus       171 -----------~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~-----~~~~~~~~~~~~~~~-----~~  229 (269)
                                 .+...|+.+|...+.+.......+   ++....+.|..+..+     ........+......     ..
T Consensus       148 ~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (338)
T d1orra_         148 KPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF---GLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINK  224 (338)
T ss_dssp             CTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCC
T ss_pred             cccCcccCCccccccccccccchhhhhhhhhhhcc---CcccccccccceeeccccccccccccchhhHHHHHHHhccCC
Confidence                       245679999999999988887776   334444443333222     111122233322221     11


Q ss_pred             ---------CCCCCCCHHHHHHHHHHhccCCCCCCccccEEEecCC
Q 024338          230 ---------PLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGG  266 (269)
Q Consensus       230 ---------~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg  266 (269)
                               ..+.+..++|++++++.++..+.  ...|+++.+.+|
T Consensus       225 ~~~~~g~g~~~r~~~~v~D~~~~~~~~l~~~~--~~~~~~~~i~~~  268 (338)
T d1orra_         225 PFTISGNGKQVRDVLHAEDMISLYFTALANVS--KIRGNAFNIGGT  268 (338)
T ss_dssp             CEEEESSSCCEEECEEHHHHHHHHHHHHHTHH--HHTTCEEEESSC
T ss_pred             ceEEeCCCceeEeeecccchhhHHHHHHhccc--cccCcccccccc
Confidence                     11224568999999998874432  356788877554

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=1.7e-16  Score=135.54  Aligned_cols=212  Identities=16%  Similarity=0.081  Sum_probs=144.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCH----HHHHHHHHHHH-HcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSS----KEAEEVCKEIE-ASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~----~~~~~~~~~l~-~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      |++|||||+|.||.+++++|.++|++|+.+..+..    ...+.+..... ....++.++.+|++|.+.+.++++..   
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   78 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV---   78 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH---
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhc---
Confidence            55599999999999999999999999998644322    11221111111 11357889999999999999998865   


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcccc-----------CC
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLV-----------GN  170 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~-----------~~  170 (269)
                        .+++++|+++.....    ...+.....+++|+.++.++..++...-. .+..++|++||.+.+-           +.
T Consensus        79 --~~~~v~~~~a~~~~~----~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~-~~~~~~i~~SS~~vyg~~~~~~~~E~~~~  151 (347)
T d1t2aa_          79 --KPTEIYNLGAQSHVK----ISFDLAEYTADVDGVGTLRLLDAVKTCGL-INSVKFYQASTSELYGKVQEIPQKETTPF  151 (347)
T ss_dssp             --CCSEEEECCSCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHTTC-TTTCEEEEEEEGGGTCSCSSSSBCTTSCC
T ss_pred             --ccceeeeeeeccccc----hhhccchhhhhhHHHHHHHHHHHHHHcCC-CCCcEEEEecchheecCCCCCCCCCCCCC
Confidence              788999998865432    12345566789999999888877754321 2345899999875431           12


Q ss_pred             CCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC--hH----HHHHHHhcCCC---------CCCC
Q 024338          171 IGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG--ED----LEKKILEKIPL---------GRYG  235 (269)
Q Consensus       171 ~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~--~~----~~~~~~~~~~~---------~~~~  235 (269)
                      .+...|+.||.+.+.+++.++..+   ++.+..+.|+.+..|......  ..    .........+.         +.+.
T Consensus       152 ~P~~~Yg~sK~~aE~~~~~~~~~~---~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i  228 (347)
T d1t2aa_         152 YPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWG  228 (347)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCE
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeee
Confidence            245679999999999998887664   788989999888887432221  11    11222222211         2356


Q ss_pred             CHHHHHHHHHHhccCC
Q 024338          236 QPEEVAGLVEFLALNP  251 (269)
Q Consensus       236 ~~~~~a~~~~~l~~~~  251 (269)
                      .++|+++++..++...
T Consensus       229 ~v~D~~~a~~~~~~~~  244 (347)
T d1t2aa_         229 HAKDYVEAMWLMLQND  244 (347)
T ss_dssp             EHHHHHHHHHHHHHSS
T ss_pred             EecHHHHHHHHHhhcC
Confidence            8999999999988654

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=5.1e-17  Score=129.11  Aligned_cols=199  Identities=15%  Similarity=0.103  Sum_probs=131.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      |..|+++||||+|+||.+++++|+++|++|.++ .|+++++...      ....+.++.+|++|.+++.++++       
T Consensus         1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~-~R~~~~~~~~------~~~~~~~~~gD~~d~~~l~~al~-------   66 (205)
T d1hdoa_           1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVL-VRDSSRLPSE------GPRPAHVVVGDVLQAADVDKTVA-------   66 (205)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEE-ESCGGGSCSS------SCCCSEEEESCTTSHHHHHHHHT-------
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEE-EcChhhcccc------cccccccccccccchhhHHHHhc-------
Confidence            346889999999999999999999999999885 6776654321      12457889999999998888776       


Q ss_pred             CccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCC----hhhHHh
Q 024338          104 TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQ----ANYSAA  179 (269)
Q Consensus       104 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~----~~Y~~s  179 (269)
                      +.|+|||++|.......  .         +++..+    ++.+++.+++.+..++|++||.......+..    ..|...
T Consensus        67 ~~d~vi~~~g~~~~~~~--~---------~~~~~~----~~~l~~aa~~~~v~r~i~~ss~~~~~~~~~~~~~~~~~~~~  131 (205)
T d1hdoa_          67 GQDAVIVLLGTRNDLSP--T---------TVMSEG----ARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDD  131 (205)
T ss_dssp             TCSEEEECCCCTTCCSC--C---------CHHHHH----HHHHHHHHHHHTCCEEEEECCGGGTSCTTCSCGGGHHHHHH
T ss_pred             CCCEEEEEeccCCchhh--h---------hhhHHH----HHHHHHHHHhcCCCeEEEEeeeeccCCCccccccccccchH
Confidence            78999999987543211  1         122333    3334455556677899999997665443322    345555


Q ss_pred             HHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCCCcccc
Q 024338          180 KAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQ  259 (269)
Q Consensus       180 K~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~  259 (269)
                      |.+.+.+       +...|++...|.||.+...........    .........+.+.+|+|++++.++.+++   ..|+
T Consensus       132 ~~~~e~~-------l~~~~~~~tiirp~~~~~~~~~~~~~~----~~~~~~~~~~i~~~DvA~~~~~~l~~~~---~~g~  197 (205)
T d1hdoa_         132 HIRMHKV-------LRESGLKYVAVMPPHIGDQPLTGAYTV----TLDGRGPSRVISKHDLGHFMLRCLTTDE---YDGH  197 (205)
T ss_dssp             HHHHHHH-------HHHTCSEEEEECCSEEECCCCCSCCEE----ESSSCSSCSEEEHHHHHHHHHHTTSCST---TTTC
T ss_pred             HHHHHHH-------HHhcCCceEEEecceecCCCCcccEEE----eeCCCCCCCcCCHHHHHHHHHHHhCCCC---CCCE
Confidence            5544433       334689999999997754321111000    0011111234578999999999996654   3488


Q ss_pred             EEEecC
Q 024338          260 VLTIDG  265 (269)
Q Consensus       260 ~i~~dg  265 (269)
                      .+.+.+
T Consensus       198 ~~~~s~  203 (205)
T d1hdoa_         198 STYPSH  203 (205)
T ss_dssp             EEEEEC
T ss_pred             EEecCC
Confidence            887654

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.71  E-value=3.4e-16  Score=132.25  Aligned_cols=210  Identities=17%  Similarity=0.074  Sum_probs=143.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCcc
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVD  106 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id  106 (269)
                      |+||||||+|.||.+++++|+++|++|+.+..+.......-.+.+. ...++.++.+|++|.+++.+.+...     ..+
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~~   74 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG-IEGDIQYEDGDMADACSVQRAVIKA-----QPQ   74 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT-CGGGEEEEECCTTCHHHHHHHHHHH-----CCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhc-ccCCcEEEEccccChHHhhhhhccc-----ccc
Confidence            7899999999999999999999999999864443221111122221 1347899999999999999888765     678


Q ss_pred             EEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcccc-----------CCCCChh
Q 024338          107 ILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLV-----------GNIGQAN  175 (269)
Q Consensus       107 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~-----------~~~~~~~  175 (269)
                      +++|+++......    ..+...+.++.|+.++..++.++...   +...++++.||..-.-           +..+...
T Consensus        75 ~~~~~a~~~~~~~----~~~~~~~~~~~n~~g~~~~l~~~~~~---~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~~~  147 (321)
T d1rpna_          75 EVYNLAAQSFVGA----SWNQPVTTGVVDGLGVTHLLEAIRQF---SPETRFYQASTSEMFGLIQAERQDENTPFYPRSP  147 (321)
T ss_dssp             EEEECCSCCCHHH----HTTSHHHHHHHHTHHHHHHHHHHHHH---CTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSH
T ss_pred             ccccccccccccc----cccchHHHHhhhhhchHHHHHHHHHh---CCCcccccccchhhcCcccCCCCCCCCCccccCh
Confidence            8888887543321    11245788999999988888777542   3345677766654321           1225578


Q ss_pred             hHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC--hHHHH---HHHh-c-CC--CC------CCCCHHHH
Q 024338          176 YSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG--EDLEK---KILE-K-IP--LG------RYGQPEEV  240 (269)
Q Consensus       176 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~--~~~~~---~~~~-~-~~--~~------~~~~~~~~  240 (269)
                      |+.+|.+.+.+++.+..++   ++++..+.|+.+..|......  .....   .... + ..  .+      .+..++|+
T Consensus       148 Y~~sK~~~E~~~~~~~~~~---~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~  224 (321)
T d1rpna_         148 YGVAKLYGHWITVNYRESF---GLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDY  224 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHH
T ss_pred             hHHHHHHHHHHHHHHHhhc---CCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHH
Confidence            9999999999988887665   688999999888887543221  11111   1111 1 11  11      35689999


Q ss_pred             HHHHHHhccCCC
Q 024338          241 AGLVEFLALNPA  252 (269)
Q Consensus       241 a~~~~~l~~~~~  252 (269)
                      |+++..++..+.
T Consensus       225 ~~~~~~~~~~~~  236 (321)
T d1rpna_         225 VEAMWLMLQQDK  236 (321)
T ss_dssp             HHHHHHHHHSSS
T ss_pred             HHHHHHHHhcCC
Confidence            999999986543

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=4.1e-16  Score=133.28  Aligned_cols=222  Identities=14%  Similarity=0.091  Sum_probs=148.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEec-----CC----HHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHH
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYA-----RS----SKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKT   97 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~-----r~----~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~   97 (269)
                      |.||||||+|.||.+++++|+++|+.|+++..     ++    ....+. .+++  ...++.++++|++|.+++++++..
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~Dl~d~~~l~~~~~~   79 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRR-VQEL--TGRSVEFEEMDILDQGALQRLFKK   79 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHH-HHHH--HTCCCEEEECCTTCHHHHHHHHHH
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHH-HHHh--cCCCcEEEEeeccccccccccccc
Confidence            78899999999999999999999999988632     11    122222 2222  246788999999999999888765


Q ss_pred             HHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccC--------
Q 024338           98 AVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVG--------  169 (269)
Q Consensus        98 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~--------  169 (269)
                      .     .+++++|+|+.....    ...+...+.++.|+.++..+++++.    +.+..+++++||......        
T Consensus        80 ~-----~~~~i~h~Aa~~~~~----~~~~~p~~~~~~Nv~gt~~l~~~~~----~~~v~~~i~~ss~~~~~~~~~~~~~~  146 (346)
T d1ek6a_          80 Y-----SFMAVIHFAGLKAVG----ESVQKPLDYYRVNLTGTIQLLEIMK----AHGVKNLVFSSSATVYGNPQYLPLDE  146 (346)
T ss_dssp             C-----CEEEEEECCSCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHH----HTTCCEEEEEEEGGGGCSCSSSSBCT
T ss_pred             c-----ccccccccccccCcH----hhHhCHHHHHHhhhcccccccchhh----hcCcccccccccceeeeccccccccc
Confidence            3     788999999975432    1223346788999999888877764    356678999988765422        


Q ss_pred             ----CCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccc--------ccChHHH----HHHHh-cCC--
Q 024338          170 ----NIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTA--------KLGEDLE----KKILE-KIP--  230 (269)
Q Consensus       170 ----~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~--------~~~~~~~----~~~~~-~~~--  230 (269)
                          ......|+.+|.+.+...+.++..  ..++....+.|+.+.++...        .......    ..... ..+  
T Consensus       147 ~~~~~~~~~~Y~~~k~~~e~~~~~~~~~--~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  224 (346)
T d1ek6a_         147 AHPTGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALN  224 (346)
T ss_dssp             TSCCCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEE
T ss_pred             cccccccCChHHHHHHHHHHHHHHHHHh--ccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEE
Confidence                124457999999988888776543  34788888888777665321        1111112    11111 111  


Q ss_pred             -------------CCCCCCHHHHHHHHHHhccCCCCCCccccEEEecCCc
Q 024338          231 -------------LGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM  267 (269)
Q Consensus       231 -------------~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg~  267 (269)
                                   .+.+..++|+|.++..+.... .....++++++.+|.
T Consensus       225 i~g~~~~~~~g~~~Rdfi~v~D~a~~~~~~~~~~-~~~~~~~i~Ni~~~~  273 (346)
T d1ek6a_         225 VFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKL-KEQCGCRIYNLGTGT  273 (346)
T ss_dssp             EECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHH-TTTCCEEEEEECCSC
T ss_pred             EcCCcccCCCCCeeEeEEEEEeccchhhhhcccc-ccccCceEEEeCCCC
Confidence                         123568999999887765322 223467888887653

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.70  E-value=5.8e-16  Score=131.69  Aligned_cols=215  Identities=12%  Similarity=0.042  Sum_probs=146.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCC----HHHHHHHHHHHHH-cCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARS----SKEAEEVCKEIEA-SGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~----~~~~~~~~~~l~~-~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      .|++|||||+|.||.+++++|+++|++|+.+..+.    ......+...... ....+.++.+|+++.+++++.++..  
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~--   78 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI--   78 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH--
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhh--
Confidence            38999999999999999999999999999864322    1122111111111 1356888999999999999988764  


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-CCCCeEEEEcCCcccc----------C
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMK-KKKGRIINIASVVGLV----------G  169 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~iv~isS~~~~~----------~  169 (269)
                         ++|+|||+|+.....    ...+.....++.|+.+...+..++...... ....++++.||.....          +
T Consensus        79 ---~~D~Vih~Aa~~~~~----~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~E~~~  151 (339)
T d1n7ha_          79 ---KPDEVYNLAAQSHVA----VSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTP  151 (339)
T ss_dssp             ---CCSEEEECCSCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSC
T ss_pred             ---ccchhhhcccccccc----ccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCCCCCCC
Confidence               899999999875432    123455678899999999998888765443 3344566666654322          1


Q ss_pred             CCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC--hHHHH---H-HHhcCC---------CCCC
Q 024338          170 NIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG--EDLEK---K-ILEKIP---------LGRY  234 (269)
Q Consensus       170 ~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~--~~~~~---~-~~~~~~---------~~~~  234 (269)
                      ..+...|+.+|.+.+.++......+   ++.+..+.|+.+..|......  .....   . .....+         .+.+
T Consensus       152 ~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~  228 (339)
T d1n7ha_         152 FHPRSPYAASKCAAHWYTVNYREAY---GLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDW  228 (339)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEEC
T ss_pred             CCCcchhhHHHHHHHHHHHHHHHHh---CCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccc
Confidence            2356689999999999888877664   799999999999888543322  11111   1 111111         1125


Q ss_pred             CCHHHHHHHHHHhccCCC
Q 024338          235 GQPEEVAGLVEFLALNPA  252 (269)
Q Consensus       235 ~~~~~~a~~~~~l~~~~~  252 (269)
                      ..++|+++++..++..+.
T Consensus       229 ~~v~D~a~~~~~~~~~~~  246 (339)
T d1n7ha_         229 GFAGDYVEAMWLMLQQEK  246 (339)
T ss_dssp             EEHHHHHHHHHHHHTSSS
T ss_pred             eeeehHHHHHHHHHhcCC
Confidence            579999999999986543

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.69  E-value=1.4e-16  Score=136.32  Aligned_cols=205  Identities=14%  Similarity=0.080  Sum_probs=140.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecC--CHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYAR--SSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r--~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      .|.||||||+|.||.+++++|.++|+.|.++...  +..........  ....++.++.+|++|.+.+..++.       
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~--~~~~~i~~~~~Di~d~~~~~~~~~-------   72 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEA--ILGDRVELVVGDIADAELVDKLAA-------   72 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGG--GCSSSEEEEECCTTCHHHHHHHHT-------
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHH--hhcCCeEEEEccCCCHHHHHHHHh-------
Confidence            5789999999999999999999999886553221  11100000011  124578999999999998888765       


Q ss_pred             CccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccC--------------
Q 024338          104 TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVG--------------  169 (269)
Q Consensus       104 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~--------------  169 (269)
                      ..|.++|.|+......    ...+.++.+++|+.++.+++..+...     +.++|++||...+-.              
T Consensus        73 ~~~~v~~~a~~~~~~~----~~~~~~~~~~~N~~g~~nll~~~~~~-----~~k~i~~ss~~vyg~~~~~~~~~~~~~~~  143 (346)
T d1oc2a_          73 KADAIVHYAAESHNDN----SLNDPSPFIHTNFIGTYTLLEAARKY-----DIRFHHVSTDEVYGDLPLREDLPGHGEGP  143 (346)
T ss_dssp             TCSEEEECCSCCCHHH----HHHCCHHHHHHHTHHHHHHHHHHHHH-----TCEEEEEEEGGGGCCBCCGGGSTTTTCST
T ss_pred             hhhhhhhhhhcccccc----hhhCcccceeeehHhHHhhhhhhccc-----cccccccccceEecccCccccccccccCc
Confidence            6888999998654321    12234578899999999988777542     247788877654311              


Q ss_pred             ---------CCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccc--cChHHHHHHHhcCCC-------
Q 024338          170 ---------NIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAK--LGEDLEKKILEKIPL-------  231 (269)
Q Consensus       170 ---------~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~--~~~~~~~~~~~~~~~-------  231 (269)
                               ..+...|+.+|.+.+.+++.+.+++   |+++..+.|+.+.+|....  ...........+.+.       
T Consensus       144 ~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~g~  220 (346)
T d1oc2a_         144 GEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGK  220 (346)
T ss_dssp             TSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSC
T ss_pred             ccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHc---CCCEEEEeecceeCCCCCccchhHHHHHHHHcCCceeEeCCCC
Confidence                     1134579999999999988887665   8999999999999874322  122333333333222       


Q ss_pred             --CCCCCHHHHHHHHHHhccCC
Q 024338          232 --GRYGQPEEVAGLVEFLALNP  251 (269)
Q Consensus       232 --~~~~~~~~~a~~~~~l~~~~  251 (269)
                        +.+...+|+|++++.+...+
T Consensus       221 ~~r~~i~v~D~a~a~~~~~~~~  242 (346)
T d1oc2a_         221 NVRDWIHTNDHSTGVWAILTKG  242 (346)
T ss_dssp             CEEECEEHHHHHHHHHHHHHHC
T ss_pred             ccccccchhhHHHHHHHHHhhc
Confidence              23557999999999887554

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.69  E-value=5.4e-16  Score=133.37  Aligned_cols=214  Identities=16%  Similarity=0.024  Sum_probs=149.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      +|..||||||+|.||.+++++|.++|+.|+++..+..+....       ......+..+|+.+.+++.++++       +
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~-------~   79 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE-------DMFCDEFHLVDLRVMENCLKVTE-------G   79 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG-------GGTCSEEEECCTTSHHHHHHHHT-------T
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchhh-------hcccCcEEEeechhHHHHHHHhh-------c
Confidence            567799999999999999999999999999864433321110       11234677889999888777664       7


Q ss_pred             ccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccC---------------
Q 024338          105 VDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVG---------------  169 (269)
Q Consensus       105 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~---------------  169 (269)
                      +|.+||+|+.......   ..+.....+..|+.++..++.++..    .+..++|++||......               
T Consensus        80 ~d~Vih~a~~~~~~~~---~~~~~~~~~~~n~~gt~~ll~~~~~----~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e  152 (363)
T d2c5aa1          80 VDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMIEAARI----NGIKRFFYASSACIYPEFKQLETTNVSLKESD  152 (363)
T ss_dssp             CSEEEECCCCCCCHHH---HTTCHHHHHHHHHHHHHHHHHHHHH----TTCSEEEEEEEGGGSCGGGSSSSSSCEECGGG
T ss_pred             CCeEeecccccccccc---cccccccccccccchhhHHHHhHHh----hCcccccccccccccccccccccccccccccc
Confidence            8999999987644211   1234567788999998777777644    56679999999776431               


Q ss_pred             ---CCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC-------hHHHHHHHhcC---------C
Q 024338          170 ---NIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG-------EDLEKKILEKI---------P  230 (269)
Q Consensus       170 ---~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~-------~~~~~~~~~~~---------~  230 (269)
                         ..+...|+.+|.+.+.+++.+..++   |+.+..+.|+.+.++......       ...........         .
T Consensus       153 ~~~~~p~~~Yg~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~  229 (363)
T d2c5aa1         153 AWPAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQ  229 (363)
T ss_dssp             GSSBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCC
T ss_pred             CCcCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCe
Confidence               1234579999999999988887665   799999999999887432111       11111111111         1


Q ss_pred             CCCCCCHHHHHHHHHHhccCCCCCCccccEEEecCCc
Q 024338          231 LGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM  267 (269)
Q Consensus       231 ~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dgg~  267 (269)
                      .+.+...+|+++++..+..++     .|+.+++.+|.
T Consensus       230 ~rd~i~v~D~~~~~~~~~~~~-----~~~~~ni~~~~  261 (363)
T d2c5aa1         230 TRSFTFIDECVEGVLRLTKSD-----FREPVNIGSDE  261 (363)
T ss_dssp             EECCEEHHHHHHHHHHHHHSS-----CCSCEEECCCC
T ss_pred             EEEEeehhHHHHHHHHHHhCC-----CCCeEEEecCC
Confidence            234668999999999998543     35677776654

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=1.2e-16  Score=135.08  Aligned_cols=210  Identities=12%  Similarity=0.018  Sum_probs=141.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCcc
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVD  106 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id  106 (269)
                      |.||||||+|.||.+++++|+++|++|+++........+.+.. . ....++.....|+.+.            .+.++|
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~-~-~~~~~~d~~~~~~~~~------------~~~~~d   67 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEH-W-IGHENFELINHDVVEP------------LYIEVD   67 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGG-G-TTCTTEEEEECCTTSC------------CCCCCS
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHH-h-cCCCceEEEehHHHHH------------HHcCCC
Confidence            7899999999999999999999999999863322221111111 1 1123455555555421            123799


Q ss_pred             EEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcccc----------------CC
Q 024338          107 ILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLV----------------GN  170 (269)
Q Consensus       107 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~----------------~~  170 (269)
                      +|||+|+......    ..++..+.+++|+.++..+++++..    .+ .++|++||.+.+.                +.
T Consensus        68 ~VihlAa~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~~~~----~~-~k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~  138 (312)
T d2b69a1          68 QIYHLASPASPPN----YMYNPIKTLKTNTIGTLNMLGLAKR----VG-ARLLLASTSEVYGDPEVHPQSEDYWGHVNPI  138 (312)
T ss_dssp             EEEECCSCCSHHH----HTTCHHHHHHHHHHHHHHHHHHHHH----HT-CEEEEEEEGGGGBSCSSSSBCTTCCCBCCSS
T ss_pred             EEEECcccCCchh----HHhCHHHHHHHHHHHHHHHHHHHHH----cC-CcEEEEEChheecCCCCCCCCccccCCCCCC
Confidence            9999998654321    1123467889999999888887643    23 4899999965442                11


Q ss_pred             CCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC----hHHHHHHHhcCCC---------CCCCCH
Q 024338          171 IGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG----EDLEKKILEKIPL---------GRYGQP  237 (269)
Q Consensus       171 ~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~----~~~~~~~~~~~~~---------~~~~~~  237 (269)
                      .+...|+.||.+.+.+++..+..+   |+.+..++|+.+..|......    +.+......+-++         +.+...
T Consensus       139 ~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v  215 (312)
T d2b69a1         139 GPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYV  215 (312)
T ss_dssp             STTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEH
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHh---CCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEH
Confidence            245679999999999999888775   799999999999988643322    3344444333221         234579


Q ss_pred             HHHHHHHHHhccCCCCCCccccEEEecCCc
Q 024338          238 EEVAGLVEFLALNPAAGYITGQVLTIDGGM  267 (269)
Q Consensus       238 ~~~a~~~~~l~~~~~~~~~~G~~i~~dgg~  267 (269)
                      +|++++++.+....     .+..+++.+|.
T Consensus       216 ~D~~~~~~~~~~~~-----~~~~~n~~~~~  240 (312)
T d2b69a1         216 SDLVNGLVALMNSN-----VSSPVNLGNPE  240 (312)
T ss_dssp             HHHHHHHHHHHTSS-----CCSCEEESCCC
T ss_pred             HHHHHHHHHHHhhc-----cCCceEecCCc
Confidence            99999999988432     24567776553

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.68  E-value=5.2e-16  Score=132.35  Aligned_cols=213  Identities=13%  Similarity=0.065  Sum_probs=145.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC-cEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCcc
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGC-KVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVD  106 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~-~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id  106 (269)
                      .||||||+|.||.+++++|+++|. .|+.+ ++..+...++.     ...++.++++|+++.+++.+.+.+      ++|
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~l-d~~~~~~~~~~-----~~~~~~~i~~Di~~~~~~~~~~~~------~~d   69 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGL-DIGSDAISRFL-----NHPHFHFVEGDISIHSEWIEYHVK------KCD   69 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEE-ESCCGGGGGGT-----TCTTEEEEECCTTTCSHHHHHHHH------HCS
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEE-eCCCcchhhhc-----cCCCeEEEECccCChHHHHHHHHh------CCC
Confidence            489999999999999999999994 67765 44333222221     145799999999987766553321      589


Q ss_pred             EEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCC----------------
Q 024338          107 ILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGN----------------  170 (269)
Q Consensus       107 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~----------------  170 (269)
                      +|||+|+......    ..+...+.++.|+.++.++++++..     .+.+.+++||...+...                
T Consensus        70 ~Vih~a~~~~~~~----~~~~~~~~~~~nv~gt~~ll~~~~~-----~~~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~  140 (342)
T d2blla1          70 VVLPLVAIATPIE----YTRNPLRVFELDFEENLRIIRYCVK-----YRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGP  140 (342)
T ss_dssp             EEEECBCCCCHHH----HHHSHHHHHHHHTHHHHHHHHHHHH-----TTCEEEEECCGGGGBTCCCSSBCTTTCCCBCCC
T ss_pred             ccccccccccccc----cccCCcccccccccccccccccccc-----ccccccccccccccccccccccccccccccccc
Confidence            9999999754321    2233467899999999988888743     23466777776543221                


Q ss_pred             --CCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc----------ChHHHHHHHhcCC--------
Q 024338          171 --IGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL----------GEDLEKKILEKIP--------  230 (269)
Q Consensus       171 --~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~----------~~~~~~~~~~~~~--------  230 (269)
                        .+...|+.||.+.+.+++..+..+   |+.+..+.|+.+..+.....          ...+......+-+        
T Consensus       141 ~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~  217 (342)
T d2blla1         141 VNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGK  217 (342)
T ss_dssp             TTCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSC
T ss_pred             cCCCcchhhhcccchhhhhhhhhccc---CceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCC
Confidence              123579999999999999888775   78899999988887643221          1222233322222        


Q ss_pred             -CCCCCCHHHHHHHHHHhccCCCCCCccccEEEecC
Q 024338          231 -LGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDG  265 (269)
Q Consensus       231 -~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~i~~dg  265 (269)
                       .+.+..++|+++++..++..+.. ...|+++++.+
T Consensus       218 ~~r~~i~v~D~~~a~~~~~~~~~~-~~~g~~~Nig~  252 (342)
T d2blla1         218 QKRCFTDIRDGIEALYRIIENAGN-RCDGEIINIGN  252 (342)
T ss_dssp             CEEECEEHHHHHHHHHHHHHCGGG-TTTTEEEEECC
T ss_pred             eeeeecccccccceeeeehhhccc-cCCCeEEEEec
Confidence             12366899999999999865432 34588998853

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.67  E-value=2.6e-16  Score=133.30  Aligned_cols=216  Identities=14%  Similarity=0.137  Sum_probs=150.7

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCcEEE------EecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGCKVLV------NYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~~v~i------~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      .||||||+|.||.+++++|+++|+.|..      +..........-...+ ....++.++.+|+++.........     
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~-----   75 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPV-DADPRLRFVHGDIRDAGLLARELR-----   75 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGG-TTCTTEEEEECCTTCHHHHHHHTT-----
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhh-hcCCCeEEEEeccccchhhhcccc-----
Confidence            4899999999999999999999976432      1111110000001111 124578999999999886665433     


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCC-----------
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGN-----------  170 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~-----------  170 (269)
                        .+|.++|+|+.....    ......++.+++|+.++..+++++..    .+..++|++||...+-+.           
T Consensus        76 --~~d~vi~~a~~~~~~----~~~~~~~~~~~~N~~gt~~ll~~~~~----~~~~~~I~~Ss~~~yg~~~~~~~~E~~~~  145 (322)
T d1r6da_          76 --GVDAIVHFAAESHVD----RSIAGASVFTETNVQGTQTLLQCAVD----AGVGRVVHVSTNQVYGSIDSGSWTESSPL  145 (322)
T ss_dssp             --TCCEEEECCSCCCHH----HHHHCCHHHHHHHTHHHHHHHHHHHH----TTCCEEEEEEEGGGGCCCSSSCBCTTSCC
T ss_pred             --ccceEEeeccccccc----ccccchHHHhhhhHHHHHHHHHHHHH----cCCceEEEeecceeecCCCCCCCCCCCCC
Confidence              889999999865432    13344567789999999998887753    556799999998665322           


Q ss_pred             CCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccc--cChHHHHHHHhcCCC---------CCCCCHHH
Q 024338          171 IGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAK--LGEDLEKKILEKIPL---------GRYGQPEE  239 (269)
Q Consensus       171 ~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~--~~~~~~~~~~~~~~~---------~~~~~~~~  239 (269)
                      .+...|+.+|.+.+.+++.+++++   |+.+..+.|+.+.+|....  ..+.+......+-++         +.+..++|
T Consensus       146 ~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D  222 (322)
T d1r6da_         146 EPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDD  222 (322)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecCCCeEEccEEHHH
Confidence            245689999999999999988765   7999999999999875332  223444444443332         12458999


Q ss_pred             HHHHHHHhccCCCCCCccccEEEecCC
Q 024338          240 VAGLVEFLALNPAAGYITGQVLTIDGG  266 (269)
Q Consensus       240 ~a~~~~~l~~~~~~~~~~G~~i~~dgg  266 (269)
                      +|+++..++..+.    .|+++++.+|
T Consensus       223 ~a~ai~~~~~~~~----~~~~~ni~~~  245 (322)
T d1r6da_         223 HCRGIALVLAGGR----AGEIYHIGGG  245 (322)
T ss_dssp             HHHHHHHHHHHCC----TTCEEEECCC
T ss_pred             HHHHHHHHHhCCC----CCCeeEEeec
Confidence            9999999996543    4788887655

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.66  E-value=2.2e-15  Score=128.94  Aligned_cols=213  Identities=15%  Similarity=0.104  Sum_probs=148.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      ++||+||||||+|.||.+++++|+++|++|+++ .|+......+.+.. .....+.++.+|++|.+.+.++++..     
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~-~r~~~~~~~~~~~~-~~~~~i~~~~~Dl~d~~~l~~~~~~~-----   78 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGY-SLTAPTVPSLFETA-RVADGMQSEIGDIRDQNKLLESIREF-----   78 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ESSCSSSSCHHHHT-TTTTTSEEEECCTTCHHHHHHHHHHH-----
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE-ECCCCccHHHHhhh-hcccCCeEEEeeccChHhhhhhhhhc-----
Confidence            579999999999999999999999999999985 56554333333222 12346889999999999999888765     


Q ss_pred             CccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccC------------CC
Q 024338          104 TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVG------------NI  171 (269)
Q Consensus       104 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~------------~~  171 (269)
                      .+|+++|+|+.....    .+.+..+..+++|+.++..+++++...   .....+++.||......            ..
T Consensus        79 ~~~~v~~~aa~~~~~----~~~~~~~~~~~~Nv~g~~n~l~~~~~~---~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~  151 (356)
T d1rkxa_          79 QPEIVFHMAAQPLVR----LSYSEPVETYSTNVMGTVYLLEAIRHV---GGVKAVVNITSDKCYDNKEWIWGYRENEAMG  151 (356)
T ss_dssp             CCSEEEECCSCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHHHH---CCCCEEEEECCGGGBCCCCSSSCBCTTSCBC
T ss_pred             hhhhhhhhhcccccc----ccccCCccccccccccchhhhhhhhcc---ccccccccccccccccccccccccccccccC
Confidence            889999999865332    124556778999999988888877642   34445666555443321            12


Q ss_pred             CChhhHHhHHHHHHHHHHHHHHhc------cCCeEEEEEecCCccCCcccc---cChHHHHHHHhcCCC--------CCC
Q 024338          172 GQANYSAAKAGVIGLTKTVAKEYA------SRNINVNAIAPGFIASDMTAK---LGEDLEKKILEKIPL--------GRY  234 (269)
Q Consensus       172 ~~~~Y~~sK~al~~~~~~la~e~~------~~gi~v~~v~pG~v~t~~~~~---~~~~~~~~~~~~~~~--------~~~  234 (269)
                      +...|+.+|.+.+.+.+..+.++.      ..++.+..+.|+.+..|....   ..+.+........+.        ..+
T Consensus       152 p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  231 (356)
T d1rkxa_         152 GYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPW  231 (356)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECC
T ss_pred             CCCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCceEEeeccccccc
Confidence            455799999999999988887653      337889999999888764322   112233333332221        124


Q ss_pred             CCHHHHHHHHHHhccC
Q 024338          235 GQPEEVAGLVEFLALN  250 (269)
Q Consensus       235 ~~~~~~a~~~~~l~~~  250 (269)
                      ..++|++.++..++..
T Consensus       232 ~~v~D~~~a~~~~~~~  247 (356)
T d1rkxa_         232 QHVLEPLSGYLLLAQK  247 (356)
T ss_dssp             EETHHHHHHHHHHHHH
T ss_pred             cccccccchhhhhhhh
Confidence            4689999998877643

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.65  E-value=2.3e-15  Score=126.81  Aligned_cols=189  Identities=14%  Similarity=0.122  Sum_probs=135.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTV  105 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i  105 (269)
                      .|.||||||+|.||.+++++|+++|+.++++..++                     .+|+.+.+.+..+++.-     .+
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~---------------------~~~~~~~~~~~~~~~~~-----~~   55 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD---------------------ELNLLDSRAVHDFFASE-----RI   55 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT---------------------TCCTTCHHHHHHHHHHH-----CC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch---------------------hccccCHHHHHHHHhhc-----CC
Confidence            47899999999999999999999999988753322                     25899999888877642     78


Q ss_pred             cEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCC---------------
Q 024338          106 DILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGN---------------  170 (269)
Q Consensus       106 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~---------------  170 (269)
                      |.++|+|+......   .......+.+++|+.++.+++.++..    .+..++|++||.+.+.+.               
T Consensus        56 d~v~~~a~~~~~~~---~~~~~~~~~~~~Nv~gt~~ll~~a~~----~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~  128 (315)
T d1e6ua_          56 DQVYLAAAKVGGIV---ANNTYPADFIYQNMMIESNIIHAAHQ----NDVNKLLFLGSSCIYPKLAKQPMAESELLQGTL  128 (315)
T ss_dssp             SEEEECCCCCCCHH---HHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCC
T ss_pred             CEEEEcchhccccc---cchhhHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEECCceEcCCCCCCCccCCccccCCC
Confidence            99999997654321   12344566788999998888777744    455689999998765321               


Q ss_pred             -CCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccC------hHHH-----HHHHh---------cC
Q 024338          171 -IGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLG------EDLE-----KKILE---------KI  229 (269)
Q Consensus       171 -~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~------~~~~-----~~~~~---------~~  229 (269)
                       +....|+.||.+.+.+++.+..+.   |+++..+.|+.+..|......      ....     .....         ..
T Consensus       129 ~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~  205 (315)
T d1e6ua_         129 EPTNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGT  205 (315)
T ss_dssp             CGGGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSC
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCc
Confidence             123469999999999999987765   799999999999887532211      1111     11111         11


Q ss_pred             CCCCCCCHHHHHHHHHHhccC
Q 024338          230 PLGRYGQPEEVAGLVEFLALN  250 (269)
Q Consensus       230 ~~~~~~~~~~~a~~~~~l~~~  250 (269)
                      +.+.+..+++++.++..+...
T Consensus       206 ~~~~~~~v~d~~~~~~~~~~~  226 (315)
T d1e6ua_         206 PMREFLHVDDMAAASIHVMEL  226 (315)
T ss_dssp             CEECEEEHHHHHHHHHHHHHS
T ss_pred             eEEEEEEeehhHHHHHHhhhh
Confidence            223455789999998887633

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.63  E-value=4.3e-16  Score=125.63  Aligned_cols=214  Identities=16%  Similarity=0.124  Sum_probs=135.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEE-EecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLV-NYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTV  105 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i-~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i  105 (269)
                      ++||||||+|.||.+++++|+++|+.+.+ ...|+++....       ...++.++.+|+++.+++.++++       ++
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~-------~~   69 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK-------IGGEADVFIGDITDADSINPAFQ-------GI   69 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHH-------TTCCTTEEECCTTSHHHHHHHHT-------TC
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHh-------ccCCcEEEEeeeccccccccccc-------cc
Confidence            79999999999999999999999977433 24677654432       23467789999999998887775       78


Q ss_pred             cEEEEccCCCCCCc---------ccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhh
Q 024338          106 DILINNAGITRDTL---------LMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANY  176 (269)
Q Consensus       106 d~li~~ag~~~~~~---------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y  176 (269)
                      |.+||+++......         ..............+|+.+...++.....    ...+...+.++.....+......+
T Consensus        70 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~s~~~~~~~~~~~~~~  145 (252)
T d2q46a1          70 DALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKV----AGVKHIVVVGSMGGTNPDHPLNKL  145 (252)
T ss_dssp             SEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHH----HTCSEEEEEEETTTTCTTCGGGGG
T ss_pred             eeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeecccccc----ccccccccccccccCCCCcccccc
Confidence            99999998643210         11111233455667888887777665544    455678888877666555444433


Q ss_pred             HHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccCh--HHHHHHHhcCCCCCCCCHHHHHHHHHHhccCCCCC
Q 024338          177 SAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGE--DLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAG  254 (269)
Q Consensus       177 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~  254 (269)
                      ..++.........  ......|+++..++||.+..+.......  ......  ......+.+++|+|++++.++.+++  
T Consensus       146 ~~~~~~~~~~~~~--~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~--~~~~~~~i~~~Dva~a~~~~l~~~~--  219 (252)
T d2q46a1         146 GNGNILVWKRKAE--QYLADSGTPYTIIRAGGLLDKEGGVRELLVGKDDEL--LQTDTKTVPRADVAEVCIQALLFEE--  219 (252)
T ss_dssp             GGCCHHHHHHHHH--HHHHHSSSCEEEEEECEEECSCTTSSCEEEESTTGG--GGSSCCEEEHHHHHHHHHHHTTCGG--
T ss_pred             cccchhhhhhhhh--hhhhcccccceeecceEEECCCcchhhhhhccCccc--ccCCCCeEEHHHHHHHHHHHhCCcc--
Confidence            3333322222111  1223458999999999988774322110  000000  0011234578999999999986654  


Q ss_pred             CccccEEEecC
Q 024338          255 YITGQVLTIDG  265 (269)
Q Consensus       255 ~~~G~~i~~dg  265 (269)
                       ..|++|++-+
T Consensus       220 -~~g~~~~i~~  229 (252)
T d2q46a1         220 -AKNKAFDLGS  229 (252)
T ss_dssp             -GTTEEEEEEE
T ss_pred             -ccCcEEEEee
Confidence             3688888743

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.63  E-value=3.6e-14  Score=122.76  Aligned_cols=173  Identities=17%  Similarity=0.150  Sum_probs=123.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHH-cCCcEEEEec--C------CHHHHHHHHHHHHHc--------CCcEEEEEccCCCHH
Q 024338           27 PVAVVTGASRGIGRAVATSLGK-AGCKVLVNYA--R------SSKEAEEVCKEIEAS--------GGQALTFGGDVSKEA   89 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~-~G~~v~i~~~--r------~~~~~~~~~~~l~~~--------~~~~~~~~~Dls~~~   89 (269)
                      ..||||||+|.||.+++++|++ .|++|+++..  +      ..+..+.....+...        ...+.++.+|++|.+
T Consensus         3 MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~   82 (383)
T d1gy8a_           3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNED   82 (383)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCHH
Confidence            3599999999999999999986 6899887531  1      111222233333221        235778999999999


Q ss_pred             HHHHHHHHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccC
Q 024338           90 DVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVG  169 (269)
Q Consensus        90 ~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~  169 (269)
                      .++++++.    ..++|+|||+|+......    ..+.....++.|+.++..++.++..    .+..++++++|......
T Consensus        83 ~l~~~~~~----~~~~d~ViH~Aa~~~~~~----~~~~~~~~~~~N~~~t~~~l~~~~~----~~~~~~~~~~s~~~~~~  150 (383)
T d1gy8a_          83 FLNGVFTR----HGPIDAVVHMCAFLAVGE----SVRDPLKYYDNNVVGILRLLQAMLL----HKCDKIIFSSSAAIFGN  150 (383)
T ss_dssp             HHHHHHHH----SCCCCEEEECCCCCCHHH----HHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGTBS
T ss_pred             Hhhhhhhc----cceeehhhcccccccccc----cccccccccccccccccccchhhhc----cCCcccccccccccccc
Confidence            88887764    357999999999754321    2334567888999998888777753    55567777776654321


Q ss_pred             ------------------CCCChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcc
Q 024338          170 ------------------NIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMT  214 (269)
Q Consensus       170 ------------------~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~  214 (269)
                                        ..+...|+.+|.+.+.+++.+...+   |+.+.++.|+.+..|..
T Consensus       151 ~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---gl~~~~lR~~~vyG~~~  210 (383)
T d1gy8a_         151 PTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---GIKGICLRYFNACGAHE  210 (383)
T ss_dssp             CCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECCCT
T ss_pred             cccccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHh---CCCEEEEecceeeccCc
Confidence                              1245779999999999988887654   78999999998887643

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=3.5e-15  Score=120.59  Aligned_cols=195  Identities=17%  Similarity=0.109  Sum_probs=132.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC--cEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGC--KVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~--~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      +++|+||||||||.||.+++++|.++|.  .|.++ .|++.....      .....+....+|+.+.+++.+.+      
T Consensus        12 m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~-~R~~~~~~~------~~~~~i~~~~~D~~~~~~~~~~~------   78 (232)
T d2bkaa1          12 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLI-GRRKLTFDE------EAYKNVNQEVVDFEKLDDYASAF------   78 (232)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEE-ESSCCCCCS------GGGGGCEEEECCGGGGGGGGGGG------
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEE-ecChhhhcc------cccceeeeeeecccccccccccc------
Confidence            5689999999999999999999999995  57775 554422111      11235667778988876554444      


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHH
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKA  181 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  181 (269)
                       .+.|++||++|...       .........++|+.++..+.+.+..    .+-.++|++||......  ....|+.+|.
T Consensus        79 -~~~d~vi~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~a~~----~~v~~fi~~Ss~~~~~~--~~~~Y~~~K~  144 (232)
T d2bkaa1          79 -QGHDVGFCCLGTTR-------GKAGAEGFVRVDRDYVLKSAELAKA----GGCKHFNLLSSKGADKS--SNFLYLQVKG  144 (232)
T ss_dssp             -SSCSEEEECCCCCH-------HHHHHHHHHHHHTHHHHHHHHHHHH----TTCCEEEEECCTTCCTT--CSSHHHHHHH
T ss_pred             -cccccccccccccc-------cccchhhhhhhcccccceeeecccc----cCccccccCCccccccC--ccchhHHHHH
Confidence             47999999998542       2335567788899998888877743    56778999999876543  3457999999


Q ss_pred             HHHHHHHHHHHHhccCCe-EEEEEecCCccCCcccccCh-HHHHHHHhcCCCC----CCCCHHHHHHHHHHhccCCC
Q 024338          182 GVIGLTKTVAKEYASRNI-NVNAIAPGFIASDMTAKLGE-DLEKKILEKIPLG----RYGQPEEVAGLVEFLALNPA  252 (269)
Q Consensus       182 al~~~~~~la~e~~~~gi-~v~~v~pG~v~t~~~~~~~~-~~~~~~~~~~~~~----~~~~~~~~a~~~~~l~~~~~  252 (269)
                      ..+...+       ..|. ++..+.||.+..+....... ..........+..    ...+++|+|++++.++..+.
T Consensus       145 ~~E~~l~-------~~~~~~~~IlRP~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~dvA~a~i~~~~~~~  214 (232)
T d2bkaa1         145 EVEAKVE-------ELKFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPR  214 (232)
T ss_dssp             HHHHHHH-------TTCCSEEEEEECCEEECTTGGGSHHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSCC
T ss_pred             Hhhhccc-------cccccceEEecCceeecCCCcCcHHHHHHHHHhhccCCcccCCCeEEHHHHHHHHHHHHhcCc
Confidence            7665433       2344 57889999998875432211 2222333322221    22467999999998885543

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.40  E-value=2.9e-13  Score=107.42  Aligned_cols=184  Identities=12%  Similarity=0.085  Sum_probs=116.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCc--EEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCK--VLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~--v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      .|++|||||||.||++++++|.++|+.  |+. ..|++..          ...+   +..+..|..++..      ...+
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~-~~r~~~~----------~~~~---~~~~~~d~~~~~~------~~~~   61 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIA-PARKALA----------EHPR---LDNPVGPLAELLP------QLDG   61 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEEC-CBSSCCC----------CCTT---EECCBSCHHHHGG------GCCS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEE-EeCCchh----------hccc---ccccccchhhhhh------cccc
Confidence            489999999999999999999999974  443 3443210          0112   3445555443322      2235


Q ss_pred             CccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhHHHH
Q 024338          104 TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAKAGV  183 (269)
Q Consensus       104 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al  183 (269)
                      .+|.+|+++|.....      ....+...++|+.++..+++++.    +.+..+++++||..+..  .....|..+|...
T Consensus        62 ~~d~vi~~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~a~----~~~v~~~i~~Ss~~~~~--~~~~~y~~~K~~~  129 (212)
T d2a35a1          62 SIDTAFCCLGTTIKE------AGSEEAFRAVDFDLPLAVGKRAL----EMGARHYLVVSALGADA--KSSIFYNRVKGEL  129 (212)
T ss_dssp             CCSEEEECCCCCHHH------HSSHHHHHHHHTHHHHHHHHHHH----HTTCCEEEEECCTTCCT--TCSSHHHHHHHHH
T ss_pred             chheeeeeeeeeccc------cccccccccchhhhhhhcccccc----ccccccccccccccccc--ccccchhHHHHHH
Confidence            799999999864221      11235678889999888887663    46677999999977653  3456799999866


Q ss_pred             HHHHHHHHHHhccCCe-EEEEEecCCccCCcccccChHHHHHHHhcC---CCCC--CCCHHHHHHHHHHhccCC
Q 024338          184 IGLTKTVAKEYASRNI-NVNAIAPGFIASDMTAKLGEDLEKKILEKI---PLGR--YGQPEEVAGLVEFLALNP  251 (269)
Q Consensus       184 ~~~~~~la~e~~~~gi-~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~---~~~~--~~~~~~~a~~~~~l~~~~  251 (269)
                      +...+       ..+. +...++|+.+..+.........   .....   ..++  ..+.+|+|++++.++.++
T Consensus       130 E~~l~-------~~~~~~~~I~Rp~~v~G~~~~~~~~~~---~~~~~~~~~~~~~~~i~v~DvA~ai~~~~~~~  193 (212)
T d2a35a1         130 EQALQ-------EQGWPQLTIARPSLLFGPREEFRLAEI---LAAPIARILPGKYHGIEACDLARALWRLALEE  193 (212)
T ss_dssp             HHHHT-------TSCCSEEEEEECCSEESTTSCEEGGGG---TTCCCC----CHHHHHHHHHHHHHHHHHHTCC
T ss_pred             hhhcc-------ccccccceeeCCcceeCCcccccHHHH---HHHHHhhccCCCCcEEEHHHHHHHHHHHHcCC
Confidence            54432       3344 6788999999876432211110   00000   0011  136799999999998654

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.31  E-value=1.9e-11  Score=100.32  Aligned_cols=179  Identities=17%  Similarity=0.141  Sum_probs=122.3

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCccEE
Q 024338           29 AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDIL  108 (269)
Q Consensus        29 vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l  108 (269)
                      +|||||+|.||.+++++|.++|++|+.+ +|+.                     +|++|.++++++++..     ++|+|
T Consensus         4 IlItGasGfiG~~l~~~L~~~g~~Vi~~-~r~~---------------------~D~~d~~~~~~~l~~~-----~~d~v   56 (281)
T d1vl0a_           4 ILITGANGQLGREIQKQLKGKNVEVIPT-DVQD---------------------LDITNVLAVNKFFNEK-----KPNVV   56 (281)
T ss_dssp             EEEESTTSHHHHHHHHHHTTSSEEEEEE-CTTT---------------------CCTTCHHHHHHHHHHH-----CCSEE
T ss_pred             EEEECCCCHHHHHHHHHHHhCCCEEEEe-echh---------------------ccCCCHHHHHHHHHHc-----CCCEE
Confidence            8999999999999999999999999885 5432                     5999999999888764     78999


Q ss_pred             EEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcccc-----------CCCCChhhH
Q 024338          109 INNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLV-----------GNIGQANYS  177 (269)
Q Consensus       109 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~-----------~~~~~~~Y~  177 (269)
                      ||+|+......    .....+..+..|+.....+...+..     ....+++.||.....           +..+...|+
T Consensus        57 ih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~~~~~~-----~~~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~~  127 (281)
T d1vl0a_          57 INCAAHTAVDK----CEEQYDLAYKINAIGPKNLAAAAYS-----VGAEIVQISTDYVFDGEAKEPITEFDEVNPQSAYG  127 (281)
T ss_dssp             EECCCCCCHHH----HHHCHHHHHHHHTHHHHHHHHHHHH-----HTCEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHH
T ss_pred             Eeecccccccc----ccccchhhccccccccccccccccc-----ccccccccccceeeeccccccccccccccchhhhh
Confidence            99998654321    2233456677787777666665543     234566666653321           223556789


Q ss_pred             HhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHHHHhcCCC-------CCCCCHHHHHHHHHHhccC
Q 024338          178 AAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPL-------GRYGQPEEVAGLVEFLALN  250 (269)
Q Consensus       178 ~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~a~~~~~l~~~  250 (269)
                      .+|...+.+.+.       .+.....+.|+.+..+..+ ....+........+.       +.+..++|+++++..++..
T Consensus       128 ~~k~~~e~~~~~-------~~~~~~i~R~~~vyG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~  199 (281)
T d1vl0a_         128 KTKLEGENFVKA-------LNPKYYIVRTAWLYGDGNN-FVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDE  199 (281)
T ss_dssp             HHHHHHHHHHHH-------HCSSEEEEEECSEESSSSC-HHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHH
T ss_pred             hhhhHHHHHHHH-------hCCCccccceeEEeCCCcc-cccchhhhhccCCceeecCCceeccchhhhhhhhhhhhhhh
Confidence            888876655432       2567888999999887432 223333333333211       2456899999999999865


Q ss_pred             C
Q 024338          251 P  251 (269)
Q Consensus       251 ~  251 (269)
                      .
T Consensus       200 ~  200 (281)
T d1vl0a_         200 K  200 (281)
T ss_dssp             T
T ss_pred             c
Confidence            3

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.31  E-value=7.8e-12  Score=103.36  Aligned_cols=128  Identities=20%  Similarity=0.198  Sum_probs=92.7

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCccE
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDI  107 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~  107 (269)
                      .||||||+|.||.++++.|.++|..+.+ ..++..                  +.+|++|.+.++++++..     ++|+
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~~v~~-~~~~~~------------------~~~Dl~~~~~~~~~i~~~-----~~D~   57 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGNLIAL-DVHSKE------------------FCGDFSNPKGVAETVRKL-----RPDV   57 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSEEEEE-CTTCSS------------------SCCCTTCHHHHHHHHHHH-----CCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEE-ECCCcc------------------ccCcCCCHHHHHHHHHHc-----CCCE
Confidence            3899999999999999999999976554 344321                  457999999999988765     7899


Q ss_pred             EEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccC-----------CCCChhh
Q 024338          108 LINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVG-----------NIGQANY  176 (269)
Q Consensus       108 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~-----------~~~~~~Y  176 (269)
                      |||+||......    ..+.-+..++.|+.++..+..++.     +.+.+++++||.....+           ..+...|
T Consensus        58 Vih~Aa~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~-----~~~~~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~y  128 (298)
T d1n2sa_          58 IVNAAAHTAVDK----AESEPELAQLLNATSVEAIAKAAN-----ETGAWVVHYSTDYVFPGTGDIPWQETDATSPLNVY  128 (298)
T ss_dssp             EEECCCCCCHHH----HTTCHHHHHHHHTHHHHHHHHHHT-----TTTCEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHH
T ss_pred             EEEecccccccc----cccCccccccccccccccchhhhh-----ccccccccccccccccCCCCCCCccccccCCCchH
Confidence            999999764321    112336678899999888777663     34567888888754422           1244679


Q ss_pred             HHhHHHHHHHHH
Q 024338          177 SAAKAGVIGLTK  188 (269)
Q Consensus       177 ~~sK~al~~~~~  188 (269)
                      +.+|.+.+.+.+
T Consensus       129 ~~~k~~~e~~~~  140 (298)
T d1n2sa_         129 GKTKLAGEKALQ  140 (298)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             hhhhhhhhhhHH
Confidence            999997766543

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.28  E-value=9.7e-12  Score=103.37  Aligned_cols=191  Identities=10%  Similarity=0.004  Sum_probs=111.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHH----HHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKE----AEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~----~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      .++||||||+|.||.+++++|+++|++|+++ .|+...    ..+....+.  ...+.++.+|++|.+++.+.+.     
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~-~R~~~~~~~~~~~~~~~~~--~~~v~~v~~d~~d~~~~~~~~~-----   74 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVL-FRPEVVSNIDKVQMLLYFK--QLGAKLIEASLDDHQRLVDALK-----   74 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEE-CCSCCSSCHHHHHHHHHHH--TTTCEEECCCSSCHHHHHHHHT-----
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEE-ECCCcccchhHHHHHhhhc--cCCcEEEEeecccchhhhhhcc-----
Confidence            3559999999999999999999999999986 554321    112222222  3567889999999988877665     


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCC-----CCChhh
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGN-----IGQANY  176 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~-----~~~~~Y  176 (269)
                        ..+.++++++.....               .|..+...++.++    .+....++++.||.......     .....|
T Consensus        75 --~~~~~~~~~~~~~~~---------------~~~~~~~~~l~~a----~~~~~~~~v~~Ss~g~~~~~~~~~~~~~~~~  133 (312)
T d1qyda_          75 --QVDVVISALAGGVLS---------------HHILEQLKLVEAI----KEAGNIKRFLPSEFGMDPDIMEHALQPGSIT  133 (312)
T ss_dssp             --TCSEEEECCCCSSSS---------------TTTTTHHHHHHHH----HHSCCCSEEECSCCSSCTTSCCCCCSSTTHH
T ss_pred             --Ccchhhhhhhhcccc---------------cchhhhhHHHHHH----HHhcCCcEEEEeeccccCCCcccccchhhhh
Confidence              788999988753221               1222222333333    23455677777775443222     223344


Q ss_pred             HHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHHH---------HHhcCCCCCCCCHHHHHHHHHHh
Q 024338          177 SAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKK---------ILEKIPLGRYGQPEEVAGLVEFL  247 (269)
Q Consensus       177 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~a~~~~~l  247 (269)
                      ..+|.....    .   ....++....+.|+.+..+............         .........+.+++|+|++++.+
T Consensus       134 ~~~~~~~~~----~---~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~  206 (312)
T d1qyda_         134 FIDKRKVRR----A---IEAASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKS  206 (312)
T ss_dssp             HHHHHHHHH----H---HHHTTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHH
T ss_pred             hHHHHHHHH----h---hcccccceEEeccceeecCCccchhhHHHHhhhcccccccccccccccceeeHHHHHHHHHHH
Confidence            555544332    2   2234778888888877543221111000000         00001112245899999999999


Q ss_pred             ccCCC
Q 024338          248 ALNPA  252 (269)
Q Consensus       248 ~~~~~  252 (269)
                      +..++
T Consensus       207 l~~~~  211 (312)
T d1qyda_         207 IDDPQ  211 (312)
T ss_dssp             TTCGG
T ss_pred             hcCcc
Confidence            86554

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.22  E-value=1.3e-11  Score=101.92  Aligned_cols=191  Identities=14%  Similarity=0.127  Sum_probs=112.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHH-----HHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEA-----EEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~-----~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      .|+||||||+|.||.+++++|.++|++|+++ .|+....     ......+.  ...+.++.+|+.+.....+.++    
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l-~R~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~----   75 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHPTFLL-VRESTASSNSEKAQLLESFK--ASGANIVHGSIDDHASLVEAVK----   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEE-CCCCCTTTTHHHHHHHHHHH--TTTCEEECCCTTCHHHHHHHHH----
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEE-ECCCccccchhHHHHHHhhc--cCCcEEEEeecccchhhhhhhh----
Confidence            5789999999999999999999999999986 4543221     11222222  3457789999999998887776    


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhH
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                         ..+.++|+++.....                   +...+.+++.    .....++++.||............+...+
T Consensus        76 ---~~~~vi~~~~~~~~~-------------------~~~~~~~a~~----~~~~~~~~~~s~~~~~~~~~~~~~~~~~~  129 (307)
T d1qyca_          76 ---NVDVVISTVGSLQIE-------------------SQVNIIKAIK----EVGTVKRFFPSEFGNDVDNVHAVEPAKSV  129 (307)
T ss_dssp             ---TCSEEEECCCGGGSG-------------------GGHHHHHHHH----HHCCCSEEECSCCSSCTTSCCCCTTHHHH
T ss_pred             ---hceeeeecccccccc-------------------hhhHHHHHHH----Hhccccceeeecccccccccccccccccc
Confidence               789999998753221                   1122222222    23455677777765444333333333333


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChHHHH--------HHHhcCCCCCCCCHHHHHHHHHHhccCCC
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEK--------KILEKIPLGRYGQPEEVAGLVEFLALNPA  252 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~a~~~~~l~~~~~  252 (269)
                      ............   ..++....+.|+.+..+...........        ..........+..++|+|++++.++..++
T Consensus       130 ~~~~~~~~~~~~---~~~~~~~i~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~  206 (307)
T d1qyca_         130 FEVKAKVRRAIE---AEGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPR  206 (307)
T ss_dssp             HHHHHHHHHHHH---HHTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGG
T ss_pred             ccccccccchhh---ccCCCceecccceecCCCccchhhhhhhhhhcccceeeecccccccCCcHHHHHHHHHHHhcChh
Confidence            332222222222   2377888899987765432221100000        00000111234589999999999986554

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.09  E-value=1.4e-10  Score=98.36  Aligned_cols=203  Identities=12%  Similarity=0.057  Sum_probs=116.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHH-HHHHHHHHHhcC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADV-ESMIKTAVDAWG  103 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~-~~~~~~~~~~~~  103 (269)
                      +.|+|+||||||.||.+++++|+++|++|+++ .|+.....  ...+. ....+.++.+|++|..+. +.++       .
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l-~R~~~~~~--~~~~~-~~~~v~~~~gD~~d~~~~~~~a~-------~   70 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQ-VHSLKGLI--AEELQ-AIPNVTLFQGPLLNNVPLMDTLF-------E   70 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEE-ESCSCSHH--HHHHH-TSTTEEEEESCCTTCHHHHHHHH-------T
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEE-ECCcchhh--hhhhc-ccCCCEEEEeeCCCcHHHHHHHh-------c
Confidence            46999999999999999999999999999986 56543322  12222 234688999999986543 3332       3


Q ss_pred             CccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCC--CCChhhHHhHH
Q 024338          104 TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGN--IGQANYSAAKA  181 (269)
Q Consensus       104 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~--~~~~~Y~~sK~  181 (269)
                      ..|.++++......      .          ++....+++.++    .+.+..+++..||.......  .....|..+|.
T Consensus        71 ~~~~~~~~~~~~~~------~----------~~~~~~~~~~aa----~~agv~~~v~~Ss~~~~~~~~~~~~~~~~~~k~  130 (350)
T d1xgka_          71 GAHLAFINTTSQAG------D----------EIAIGKDLADAA----KRAGTIQHYIYSSMPDHSLYGPWPAVPMWAPKF  130 (350)
T ss_dssp             TCSEEEECCCSTTS------C----------HHHHHHHHHHHH----HHHSCCSEEEEEECCCGGGTSSCCCCTTTHHHH
T ss_pred             CCceEEeecccccc------h----------hhhhhhHHHHHH----HHhCCCceEEEeeccccccCCcccchhhhhhHH
Confidence            78888777543211      1          122222333333    23455677778876654332  33445667777


Q ss_pred             HHHHHHHHHHHHhccCCeEEEEEecCCccCCcccccChH----HHHH--HHhcCCCC-C----CCC-HHHHHHHHHHhcc
Q 024338          182 GVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGED----LEKK--ILEKIPLG-R----YGQ-PEEVAGLVEFLAL  249 (269)
Q Consensus       182 al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~----~~~~--~~~~~~~~-~----~~~-~~~~a~~~~~l~~  249 (269)
                      ..+.+.+       ..++....+.|+.+..+........    ....  .....+.. .    +.+ .+|+++++..++.
T Consensus       131 ~~~~~~~-------~~~~~~~~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~  203 (350)
T d1xgka_         131 TVENYVR-------QLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFK  203 (350)
T ss_dssp             HHHHHHH-------TSSSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHH
T ss_pred             HHHHHHH-------hhccCceeeeeceeeccccccccccccccccccccceeeecccCCCcceEEEeHHHHHHHHHHHHh
Confidence            5544432       3357788888887654322111100    0000  00001110 0    112 4789999988874


Q ss_pred             CCCCCCccccEEEecCC
Q 024338          250 NPAAGYITGQVLTIDGG  266 (269)
Q Consensus       250 ~~~~~~~~G~~i~~dgg  266 (269)
                      +.. ....|+++.+.|.
T Consensus       204 ~~~-~~~~G~~~~~~g~  219 (350)
T d1xgka_         204 DGP-QKWNGHRIALTFE  219 (350)
T ss_dssp             HCH-HHHTTCEEEECSE
T ss_pred             CCh-hhcCCeEEEEeCC
Confidence            432 2346888887654

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.05  E-value=1e-09  Score=90.58  Aligned_cols=206  Identities=13%  Similarity=0.106  Sum_probs=119.5

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCC-cEEEEecCCH-HHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH--hcCC
Q 024338           29 AVVTGASRGIGRAVATSLGKAGC-KVLVNYARSS-KEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD--AWGT  104 (269)
Q Consensus        29 vlItGas~giG~~~a~~l~~~G~-~v~i~~~r~~-~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~--~~~~  104 (269)
                      ||||||+|.||.+++++|+++|. .|+++...+. .....+    ...      ..+|..+.+.   ..+....  .+..
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~----~~~------~~~~~~~~~~---~~~~~~~~~~~~~   68 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNL----VDL------NIADYMDKED---FLIQIMAGEEFGD   68 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHH----HTS------CCSEEEEHHH---HHHHHHTTCCCSS
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhcc----ccc------chhhhccchH---HHHHHhhhhcccc
Confidence            89999999999999999999997 4665421111 111111    110      1223333332   3333332  3356


Q ss_pred             ccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccC-----------CCCC
Q 024338          105 VDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVG-----------NIGQ  173 (269)
Q Consensus       105 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~-----------~~~~  173 (269)
                      +++++|.|+.....      ....+...+.|+.+...+..++..    +.. ++++.||.....+           .++.
T Consensus        69 ~~~i~~~aa~~~~~------~~~~~~~~~~~~~~~~~~l~~~~~----~~i-~~v~~ss~~~~~~~~~~~~~~~~~~~~~  137 (307)
T d1eq2a_          69 VEAIFHEGACSSTT------EWDGKYMMDNNYQYSKELLHYCLE----REI-PFLYASSAATYGGRTSDFIESREYEKPL  137 (307)
T ss_dssp             CCEEEECCSCCCTT------CCCHHHHHHHTHHHHHHHHHHHHH----HTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCS
T ss_pred             hhhhhhhccccccc------cccccccccccccccccccccccc----ccc-cccccccccccccccccccccccccccc
Confidence            88999998754332      113355677778887776665543    233 3555555444322           2356


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCCccccc------ChHHHHHHHhc----------CCCCCCCCH
Q 024338          174 ANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKL------GEDLEKKILEK----------IPLGRYGQP  237 (269)
Q Consensus       174 ~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~------~~~~~~~~~~~----------~~~~~~~~~  237 (269)
                      ..|+.+|.+.+.+++.+..+   .++.+..+.|..+..|.....      ...+...+..+          ...+.+..+
T Consensus       138 ~~Y~~~K~~~e~~~~~~~~~---~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v  214 (307)
T d1eq2a_         138 NVYGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYV  214 (307)
T ss_dssp             SHHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEH
T ss_pred             cccccccchhhhhccccccc---cccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeec
Confidence            68999999888887766543   478888888888887743211      11122222211          112245578


Q ss_pred             HHHHHHHHHhccCCCCCCccccEEEecCC
Q 024338          238 EEVAGLVEFLALNPAAGYITGQVLTIDGG  266 (269)
Q Consensus       238 ~~~a~~~~~l~~~~~~~~~~G~~i~~dgg  266 (269)
                      +|++.++..+...+.     ...+++.+|
T Consensus       215 ~d~~~~~~~~~~~~~-----~~~~~~~~~  238 (307)
T d1eq2a_         215 GDVADVNLWFLENGV-----SGIFNLGTG  238 (307)
T ss_dssp             HHHHHHHHHHHHHCC-----CEEEEESCS
T ss_pred             ccHHHHHHHHhhhcc-----ccccccccc
Confidence            999999998885432     245555544

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.00  E-value=6.1e-15  Score=115.56  Aligned_cols=169  Identities=12%  Similarity=0.150  Sum_probs=89.1

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEE--------------EccCCCHHHHHH
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTF--------------GGDVSKEADVES   93 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~--------------~~Dls~~~~~~~   93 (269)
                      ++.|+||+|++|.++|+.|+++|++|++. +|++++++++.+++..........              ........... 
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~-~R~~e~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-   79 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVG-SRREEKAEAKAAEYRRIAGDASITGMKNEDAAEACDIAVLTIPWEHAID-   79 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEE-ESSHHHHHHHHHHHHHHHSSCCEEEEEHHHHHHHCSEEEECSCHHHHHH-
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEE-ECCHHHHHHHHHHHHhcCCCceEEeeccccccchhhhhhhheeeeccch-
Confidence            36788888999999999999999999984 899999999988887542221111              11112122122 


Q ss_pred             HHHHHHHhcCCccEEEEccCCCCC-CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCC
Q 024338           94 MIKTAVDAWGTVDILINNAGITRD-TLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIG  172 (269)
Q Consensus        94 ~~~~~~~~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~  172 (269)
                      ........................ ....              ......+.+...+.+........+++.|.........
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (212)
T d1jaya_          80 TARDLKNILREKIVVSPLVPVSRGAKGFT--------------YSSERSAAEIVAEVLESEKVVSALHTIPAARFANLDE  145 (212)
T ss_dssp             HHHHTHHHHTTSEEEECCCCEECCTTCCE--------------ECCSSCHHHHHHHHHTCSCEEECCTTCCHHHHHCTTC
T ss_pred             HHHHhhhhhcccccccccccccccccccc--------------ccccchhhhhhhhhhhhhcccccceeecHHHhcCccc
Confidence            111111111111111111111000 0000              0000001122223332333333333444444444445


Q ss_pred             ChhhHHhHHHHHHHHHHHHHHhccCCeEEEEEecCCccCC
Q 024338          173 QANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASD  212 (269)
Q Consensus       173 ~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~  212 (269)
                      ...|..++++....++..+.++....+.++.++||.+.+.
T Consensus       146 ~~~~~~~~a~~~~~a~~~~~~~~~~~~g~~~~~~G~l~~a  185 (212)
T d1jaya_         146 KFDWDVPVCGDDDESKKVVMSLISEIDGLRPLDAGPLSNS  185 (212)
T ss_dssp             CCCEEEEEEESCHHHHHHHHHHHHHSTTEEEEEEESGGGH
T ss_pred             ccCccceEEeCCHHHHHHHHHHHhhCCCeEEEEeChHHHH
Confidence            5566666666667777777776666778889999988764

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=98.09  E-value=1.6e-05  Score=60.29  Aligned_cols=84  Identities=15%  Similarity=0.275  Sum_probs=63.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHH---HHHHHHHcCCcEEEEEccCCCHHHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEE---VCKEIEASGGQALTFGGDVSKEADVESMIKTA   98 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~---~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~   98 (269)
                      .++++|+++|.|+ ||.|++++..|++.|.+.+.+..|+++..++   +.+.+..... ......|+.+.+++...+.  
T Consensus        14 ~~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--   89 (182)
T d1vi2a1          14 FDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTD-CVVTVTDLADQQAFAEALA--   89 (182)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSS-CEEEEEETTCHHHHHHHHH--
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcC-cceEeeecccccchhhhhc--
Confidence            4789999999999 6999999999999998766667887665544   3444443333 3355789999887776655  


Q ss_pred             HHhcCCccEEEEccCC
Q 024338           99 VDAWGTVDILINNAGI  114 (269)
Q Consensus        99 ~~~~~~id~li~~ag~  114 (269)
                           ..|++||+...
T Consensus        90 -----~~diiIN~Tp~  100 (182)
T d1vi2a1          90 -----SADILTNGTKV  100 (182)
T ss_dssp             -----TCSEEEECSST
T ss_pred             -----ccceeccccCC
Confidence                 78999999764

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=98.01  E-value=2.4e-05  Score=59.62  Aligned_cols=87  Identities=14%  Similarity=0.211  Sum_probs=55.4

Q ss_pred             CCCEEEE-eCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh-c
Q 024338           25 EAPVAVV-TGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA-W  102 (269)
Q Consensus        25 ~~k~vlI-tGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~-~  102 (269)
                      +|++++| +||+|++|...++.....|++|+.++ ++.+..++..+.+++.+.+..+.. |-.+..+..+.+.++.+. .
T Consensus        28 ~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v-~~~~~~~~~~~~~~~lGad~vi~~-~~~~~~~~~~~v~~~~~~~g  105 (189)
T d1gu7a2          28 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVI-RDRPNLDEVVASLKELGATQVITE-DQNNSREFGPTIKEWIKQSG  105 (189)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEE-CCCTTHHHHHHHHHHHTCSEEEEH-HHHHCGGGHHHHHHHHHHHT
T ss_pred             CCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEE-ecccccchHHhhhhhccccEEEec-cccchhHHHHHHHHHHhhcc
Confidence            4555555 79999999999998888999999864 454455555556666565543332 111122333444454443 3


Q ss_pred             CCccEEEEccC
Q 024338          103 GTVDILINNAG  113 (269)
Q Consensus       103 ~~id~li~~ag  113 (269)
                      +++|+++.+.|
T Consensus       106 ~~vdvv~D~vg  116 (189)
T d1gu7a2         106 GEAKLALNCVG  116 (189)
T ss_dssp             CCEEEEEESSC
T ss_pred             CCceEEEECCC
Confidence            47999999886

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.97  E-value=4e-05  Score=57.16  Aligned_cols=83  Identities=23%  Similarity=0.252  Sum_probs=55.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      -.|.+++|+| +|++|...+..+...|++|++ +.+++++++. ++++   +....+ ..|-. .++.....+++.+..+
T Consensus        25 ~~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~-v~~~~~r~~~-a~~~---ga~~~~-~~~~~-~~~~~~~~~~~~~~~g   96 (170)
T d1e3ja2          25 QLGTTVLVIG-AGPIGLVSVLAAKAYGAFVVC-TARSPRRLEV-AKNC---GADVTL-VVDPA-KEEESSIIERIRSAIG   96 (170)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEE-EESCHHHHHH-HHHT---TCSEEE-ECCTT-TSCHHHHHHHHHHHSS
T ss_pred             CCCCEEEEEc-ccccchhhHhhHhhhcccccc-cchHHHHHHH-HHHc---CCcEEE-ecccc-ccccchhhhhhhcccc
Confidence            3578999997 689999999999999999887 5788776643 3333   433322 22222 2234444556666554


Q ss_pred             -CccEEEEccCC
Q 024338          104 -TVDILINNAGI  114 (269)
Q Consensus       104 -~id~li~~ag~  114 (269)
                       .+|++|.++|.
T Consensus        97 ~g~D~vid~~g~  108 (170)
T d1e3ja2          97 DLPNVTIDCSGN  108 (170)
T ss_dssp             SCCSEEEECSCC
T ss_pred             cCCceeeecCCC
Confidence             69999999983

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.96  E-value=4.7e-05  Score=56.29  Aligned_cols=76  Identities=20%  Similarity=0.391  Sum_probs=57.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      .++++|.+||.|+ |++|..+++.|..+|+..+.++.|+.++.+++.+++.   ...  .     +.+++.+.+.     
T Consensus        20 ~~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~---~~~--~-----~~~~~~~~l~-----   83 (159)
T d1gpja2          20 GSLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG---GEA--V-----RFDELVDHLA-----   83 (159)
T ss_dssp             SCCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHT---CEE--C-----CGGGHHHHHH-----
T ss_pred             CCcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhh---ccc--c-----cchhHHHHhc-----
Confidence            3789999999998 9999999999999998644447999998888888762   221  1     2233444333     


Q ss_pred             cCCccEEEEccCCC
Q 024338          102 WGTVDILINNAGIT  115 (269)
Q Consensus       102 ~~~id~li~~ag~~  115 (269)
                        ..|++|++.+..
T Consensus        84 --~~Divi~atss~   95 (159)
T d1gpja2          84 --RSDVVVSATAAP   95 (159)
T ss_dssp             --TCSEEEECCSSS
T ss_pred             --cCCEEEEecCCC
Confidence              789999998743

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.88  E-value=3.1e-05  Score=57.92  Aligned_cols=74  Identities=19%  Similarity=0.293  Sum_probs=56.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTV  105 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i  105 (269)
                      +|.++|.|| |.+|..+|+.|+++|++|++ ..|+.+.++++.+++    ........+..+.......+.       ..
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v-~dr~~~~a~~l~~~~----~~~~~~~~~~~~~~~~~~~i~-------~~   68 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTV-ACRTLESAKKLSAGV----QHSTPISLDVNDDAALDAEVA-------KH   68 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEE-EESCHHHHHHHHTTC----TTEEEEECCTTCHHHHHHHHT-------TS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEE-EECChHHHHHHHhcc----cccccccccccchhhhHhhhh-------cc
Confidence            689999987 89999999999999999888 699999888776543    445556667777666666554       56


Q ss_pred             cEEEEcc
Q 024338          106 DILINNA  112 (269)
Q Consensus       106 d~li~~a  112 (269)
                      |.++...
T Consensus        69 ~~~i~~~   75 (182)
T d1e5qa1          69 DLVISLI   75 (182)
T ss_dssp             SEEEECS
T ss_pred             ceeEeec
Confidence            7766544

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.86  E-value=3.2e-05  Score=58.48  Aligned_cols=79  Identities=23%  Similarity=0.239  Sum_probs=53.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      +|++|||+||+|++|...++.....|++|+.+ .+++++.+    .+++.+.+..+..-|-...+   ...+...  ..+
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~-~~~~~~~~----~~~~~Ga~~vi~~~~~~~~~---~~~~~~~--~~G   98 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGA-AGSDEKIA----YLKQIGFDAAFNYKTVNSLE---EALKKAS--PDG   98 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEE-ESSHHHHH----HHHHTTCSEEEETTSCSCHH---HHHHHHC--TTC
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEe-CCCHHHHH----HHHhhhhhhhcccccccHHH---HHHHHhh--cCC
Confidence            58999999999999999999999999999985 56665443    33334544433333333333   2222211  136


Q ss_pred             ccEEEEccC
Q 024338          105 VDILINNAG  113 (269)
Q Consensus       105 id~li~~ag  113 (269)
                      +|+++++.|
T Consensus        99 vd~v~D~vG  107 (182)
T d1v3va2          99 YDCYFDNVG  107 (182)
T ss_dssp             EEEEEESSC
T ss_pred             CceeEEecC
Confidence            999999997

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.80  E-value=4.6e-05  Score=57.10  Aligned_cols=77  Identities=19%  Similarity=0.246  Sum_probs=52.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc--
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW--  102 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~--  102 (269)
                      +|++|||+||+|++|...++.....|++|+++ .+++++.+ ..+   +.+... +  .|.++.+-.+    ++.+..  
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~-~~~~~~~~-~~~---~~Ga~~-v--i~~~~~~~~~----~i~~~t~~   95 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGT-AGTEEGQK-IVL---QNGAHE-V--FNHREVNYID----KIKKYVGE   95 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEE-ESSHHHHH-HHH---HTTCSE-E--EETTSTTHHH----HHHHHHCT
T ss_pred             CCCEEEEEeccccccccccccccccCcccccc-cccccccc-ccc---ccCccc-c--cccccccHHH----Hhhhhhcc
Confidence            68999999999999999999998999999885 45655443 333   334432 2  2555543223    333322  


Q ss_pred             CCccEEEEccC
Q 024338          103 GTVDILINNAG  113 (269)
Q Consensus       103 ~~id~li~~ag  113 (269)
                      .++|+++.+.|
T Consensus        96 ~g~d~v~d~~g  106 (174)
T d1yb5a2          96 KGIDIIIEMLA  106 (174)
T ss_dssp             TCEEEEEESCH
T ss_pred             CCceEEeeccc
Confidence            25999999876

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.76  E-value=2e-05  Score=59.39  Aligned_cols=107  Identities=17%  Similarity=0.172  Sum_probs=65.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      .+|++|||+||+||+|...++.....|++|+.+ .+++++.+ .+   ++.+.+..+   |-++ . ..+....+  .-+
T Consensus        30 ~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat-~~s~~k~~-~~---~~lGa~~vi---~~~~-~-~~~~~~~~--~~~   97 (176)
T d1xa0a2          30 PERGPVLVTGATGGVGSLAVSMLAKRGYTVEAS-TGKAAEHD-YL---RVLGAKEVL---ARED-V-MAERIRPL--DKQ   97 (176)
T ss_dssp             GGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEE-ESCTTCHH-HH---HHTTCSEEE---ECC-----------C--CSC
T ss_pred             CCCCEEEEEeccchHHHHHHHHHHHcCCceEEe-cCchHHHH-HH---Hhcccceee---ecch-h-HHHHHHHh--hcc
Confidence            358999999999999999888888999999985 45544433 22   333554433   2221 1 11211111  113


Q ss_pred             CccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCC
Q 024338          104 TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGN  170 (269)
Q Consensus       104 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~  170 (269)
                      ++|++|.+.|...                          ....+..+  +.+||++.++...+..+.
T Consensus        98 gvD~vid~vgg~~--------------------------~~~~l~~l--~~~Griv~~G~~~g~~~~  136 (176)
T d1xa0a2          98 RWAAAVDPVGGRT--------------------------LATVLSRM--RYGGAVAVSGLTGGAEVP  136 (176)
T ss_dssp             CEEEEEECSTTTT--------------------------HHHHHHTE--EEEEEEEECSCCSSSCCC
T ss_pred             CcCEEEEcCCchh--------------------------HHHHHHHh--CCCceEEEeecccCcccC
Confidence            7999999998421                          22333444  568999999987666543

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.72  E-value=2.9e-05  Score=59.02  Aligned_cols=106  Identities=20%  Similarity=0.277  Sum_probs=64.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      .+++|||+||+||+|...++.....|+++++.+.+++++..++.+++   +.+.   ..|.++++ ..+.++++..  .+
T Consensus        30 ~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~---gad~---vi~~~~~~-~~~~~~~~~~--~G  100 (187)
T d1vj1a2          30 SNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSEL---GFDA---AVNYKTGN-VAEQLREACP--GG  100 (187)
T ss_dssp             SCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHS---CCSE---EEETTSSC-HHHHHHHHCT--TC
T ss_pred             CCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcc---cceE---Eeeccchh-HHHHHHHHhc--cC
Confidence            34899999999999999998888899987776667776666665554   3332   22444322 3333333332  36


Q ss_pred             ccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccc
Q 024338          105 VDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGL  167 (269)
Q Consensus       105 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~  167 (269)
                      +|+++.+.|.           +.               .+..++.+  +.+|+++.++++.+.
T Consensus       101 vDvv~D~vGg-----------~~---------------~~~~~~~l--~~~G~iv~~G~~s~~  135 (187)
T d1vj1a2         101 VDVYFDNVGG-----------DI---------------SNTVISQM--NENSHIILCGQISQY  135 (187)
T ss_dssp             EEEEEESSCH-----------HH---------------HHHHHTTE--EEEEEEEEC------
T ss_pred             ceEEEecCCc-----------hh---------------HHHHhhhc--cccccEEEecccccc
Confidence            9999999872           11               12223333  577999998776553

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.68  E-value=0.00093  Score=49.48  Aligned_cols=81  Identities=19%  Similarity=0.212  Sum_probs=53.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC-
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG-  103 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~-  103 (269)
                      .|.+++|.|+ |++|...+..+...|+..++.+.+++++++. ++++   +.+. ++..+-.+..+..+   .+...++ 
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~-a~~~---Ga~~-~~~~~~~~~~~~~~---~~~~~~g~   96 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSK-AKEI---GADL-VLQISKESPQEIAR---KVEGQLGC   96 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHH-HHHT---TCSE-EEECSSCCHHHHHH---HHHHHHTS
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHH-HHHh---CCcc-cccccccccccccc---cccccCCC
Confidence            5789999987 8999999999999999544446888776653 3333   4333 23333344444444   4444443 


Q ss_pred             CccEEEEccCC
Q 024338          104 TVDILINNAGI  114 (269)
Q Consensus       104 ~id~li~~ag~  114 (269)
                      ++|++|.+.|.
T Consensus        97 g~Dvvid~~G~  107 (171)
T d1pl8a2          97 KPEVTIECTGA  107 (171)
T ss_dssp             CCSEEEECSCC
T ss_pred             CceEEEeccCC
Confidence            79999999983

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.63  E-value=6.8e-05  Score=56.51  Aligned_cols=77  Identities=18%  Similarity=0.277  Sum_probs=52.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc--
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW--  102 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~--  102 (269)
                      +|+++||+||+|++|...++.+...|++++++ .+++++.+    .+++.+.+..   .|-.+++ +   .+++.+..  
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~-~~~~~~~~----~l~~~Ga~~v---i~~~~~~-~---~~~v~~~t~~   92 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTT-AGSDAKRE----MLSRLGVEYV---GDSRSVD-F---ADEILELTDG   92 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEE-ESSHHHHH----HHHTTCCSEE---EETTCST-H---HHHHHHHTTT
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceee-eccccccc----cccccccccc---ccCCccC-H---HHHHHHHhCC
Confidence            57999999999999999999998999999985 45555443    3334454432   2444432 2   23444433  


Q ss_pred             CCccEEEEccC
Q 024338          103 GTVDILINNAG  113 (269)
Q Consensus       103 ~~id~li~~ag  113 (269)
                      .++|+++.+.|
T Consensus        93 ~g~d~v~d~~g  103 (183)
T d1pqwa_          93 YGVDVVLNSLA  103 (183)
T ss_dssp             CCEEEEEECCC
T ss_pred             CCEEEEEeccc
Confidence            26999999997

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.58  E-value=0.0001  Score=57.59  Aligned_cols=81  Identities=17%  Similarity=0.217  Sum_probs=57.4

Q ss_pred             CCCCCCEEEEeCC----------------CCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccC
Q 024338           22 QNVEAPVAVVTGA----------------SRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDV   85 (269)
Q Consensus        22 ~~~~~k~vlItGa----------------s~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl   85 (269)
                      .+|+||.||||+|                ||..|.++|+++..+|++|.++.+......          ...+..+  .+
T Consensus         2 ~dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~~----------p~~~~~~--~~   69 (223)
T d1u7za_           2 NDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLPT----------PPFVKRV--DV   69 (223)
T ss_dssp             CTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCCC----------CTTEEEE--EC
T ss_pred             cccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccCc----------ccccccc--ee
Confidence            5789999999987                578999999999999999998655443111          1233333  34


Q ss_pred             CCHHHHHHHHHHHHHhcCCccEEEEccCCCCC
Q 024338           86 SKEADVESMIKTAVDAWGTVDILINNAGITRD  117 (269)
Q Consensus        86 s~~~~~~~~~~~~~~~~~~id~li~~ag~~~~  117 (269)
                      .+.+++...+.+   .+...|++|++|+..+.
T Consensus        70 ~t~~~m~~~~~~---~~~~~D~~i~aAAvsDf   98 (223)
T d1u7za_          70 MTALEMEAAVNA---SVQQQNIFIGCAAVADY   98 (223)
T ss_dssp             CSHHHHHHHHHH---HGGGCSEEEECCBCCSE
T ss_pred             hhhHHHHHHHHh---hhccceeEeeeechhhh
Confidence            455555554443   34568999999998754

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.55  E-value=0.00013  Score=54.39  Aligned_cols=76  Identities=22%  Similarity=0.279  Sum_probs=56.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      .+++||.+||.|+ ||-+++++..|.+.|.++.+ ..|+.++.+++.+.+.... .+..+  +..+.            .
T Consensus        14 ~~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I-~nRt~~ka~~l~~~~~~~~-~~~~~--~~~~~------------~   76 (170)
T d1nyta1          14 FIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTI-TNRTVSRAEELAKLFAHTG-SIQAL--SMDEL------------E   76 (170)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEE-ECSSHHHHHHHHHHTGGGS-SEEEC--CSGGG------------T
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHhcccceEEEe-ccchHHHHHHHHHHHhhcc-ccccc--ccccc------------c
Confidence            4678999999998 68999999999999998666 6999999988888775543 23322  22211            1


Q ss_pred             cCCccEEEEccCC
Q 024338          102 WGTVDILINNAGI  114 (269)
Q Consensus       102 ~~~id~li~~ag~  114 (269)
                      ....|++||+...
T Consensus        77 ~~~~dliIN~Tp~   89 (170)
T d1nyta1          77 GHEFDLIINATSS   89 (170)
T ss_dssp             TCCCSEEEECCSC
T ss_pred             ccccceeeccccc
Confidence            1368999999754

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.55  E-value=6.4e-05  Score=56.47  Aligned_cols=79  Identities=16%  Similarity=0.217  Sum_probs=53.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      +|+++||+||+|++|..+++.....|++|+++ .+++++.+. .+++   +.+. +  .|-++++-.++ +.++.+ -..
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~-~~s~~k~~~-~~~l---Ga~~-v--i~~~~~d~~~~-v~~~t~-g~g   97 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGT-VGTAQKAQS-ALKA---GAWQ-V--INYREEDLVER-LKEITG-GKK   97 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEE-ESSHHHHHH-HHHH---TCSE-E--EETTTSCHHHH-HHHHTT-TCC
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeec-ccchHHHHH-HHhc---CCeE-E--EECCCCCHHHH-HHHHhC-CCC
Confidence            58999999999999999999999999999884 667666543 3333   4332 2  35555432232 222221 126


Q ss_pred             ccEEEEccC
Q 024338          105 VDILINNAG  113 (269)
Q Consensus       105 id~li~~ag  113 (269)
                      +|+++.+.|
T Consensus        98 ~d~v~d~~g  106 (179)
T d1qora2          98 VRVVYDSVG  106 (179)
T ss_dssp             EEEEEECSC
T ss_pred             eEEEEeCcc
Confidence            899999887

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.50  E-value=0.00036  Score=51.99  Aligned_cols=77  Identities=18%  Similarity=0.221  Sum_probs=58.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      .++++|.++|.|+ ||-+++++..|.+.+.++.+ ..|+.++.+++.+.+... ..+..+..|-.              .
T Consensus        14 ~~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I-~nR~~~~a~~l~~~~~~~-~~~~~~~~~~~--------------~   76 (171)
T d1p77a1          14 WLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVL-ANRTFSKTKELAERFQPY-GNIQAVSMDSI--------------P   76 (171)
T ss_dssp             CCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEE-EESSHHHHHHHHHHHGGG-SCEEEEEGGGC--------------C
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHHcccCceeee-ccchHHHHHHHHHHHhhc-cccchhhhccc--------------c
Confidence            4678999999987 58899999999988877777 699999999998888643 34555544421              1


Q ss_pred             cCCccEEEEccCCC
Q 024338          102 WGTVDILINNAGIT  115 (269)
Q Consensus       102 ~~~id~li~~ag~~  115 (269)
                      ....|++||+....
T Consensus        77 ~~~~diiIN~tp~g   90 (171)
T d1p77a1          77 LQTYDLVINATSAG   90 (171)
T ss_dssp             CSCCSEEEECCCC-
T ss_pred             ccccceeeeccccc
Confidence            24789999998754

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.47  E-value=0.00017  Score=51.36  Aligned_cols=71  Identities=23%  Similarity=0.354  Sum_probs=54.7

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCccE
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDI  107 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~  107 (269)
                      .++|.|+ |.+|+.+++.|.++|+.|++ ..++++..+++.+++     ...++.+|.+|.+.++++-      ....|.
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~v-id~d~~~~~~~~~~~-----~~~vi~Gd~~~~~~l~~~~------i~~a~~   68 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVL-IDIDKDICKKASAEI-----DALVINGDCTKIKTLEDAG------IEDADM   68 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEE-EESCHHHHHHHHHHC-----SSEEEESCTTSHHHHHHTT------TTTCSE
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcce-ecCChhhhhhhhhhh-----hhhhccCcccchhhhhhcC------hhhhhh
Confidence            5889998 89999999999999999988 588888777655432     4567889999988666541      136777


Q ss_pred             EEEc
Q 024338          108 LINN  111 (269)
Q Consensus       108 li~~  111 (269)
                      ++..
T Consensus        69 vv~~   72 (132)
T d1lssa_          69 YIAV   72 (132)
T ss_dssp             EEEC
T ss_pred             hccc
Confidence            7764

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.47  E-value=0.0011  Score=48.04  Aligned_cols=117  Identities=17%  Similarity=0.197  Sum_probs=70.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC-cEEEEecCCHHHHHHHHHHHHHc----CCcEEEEEccCCCHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGC-KVLVNYARSSKEAEEVCKEIEAS----GGQALTFGGDVSKEADVESMIK   96 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~-~v~i~~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dls~~~~~~~~~~   96 (269)
                      ++-.++.+.|+|+ |.+|..+|..++.+|. .-+++++++++.++....++...    ...+.+...|..          
T Consensus         2 ~~~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~~----------   70 (148)
T d1ldna1           2 KNNGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYD----------   70 (148)
T ss_dssp             TTTTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGG----------
T ss_pred             CCCCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCHH----------
Confidence            3445678899997 9999999999999883 33444788888776666566542    223333333331          


Q ss_pred             HHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-CCCCeEEEEcC
Q 024338           97 TAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMK-KKKGRIINIAS  163 (269)
Q Consensus        97 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~iv~isS  163 (269)
                          .+..-|++|.++|......  ...    .+.+..|..-    .+.+.+.+.+ .+.+.++++|-
T Consensus        71 ----~l~daDvvvitag~~~~~~--~~R----~dl~~~N~~i----~~~i~~~i~~~~p~a~~ivvtN  124 (148)
T d1ldna1          71 ----DCRDADLVVICAGANQKPG--ETR----LDLVDKNIAI----FRSIVESVMASGFQGLFLVATN  124 (148)
T ss_dssp             ----GTTTCSEEEECCSCCCCTT--TCS----GGGHHHHHHH----HHHHHHHHHHHTCCSEEEECSS
T ss_pred             ----HhccceeEEEecccccccC--cch----hHHHHHHHHH----HHHHHHHHHhhCCCceEEEecC
Confidence                1236899999999653321  111    2233444433    4444444433 46677777764

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.39  E-value=0.0017  Score=46.85  Aligned_cols=112  Identities=15%  Similarity=0.253  Sum_probs=65.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcC--CcEEEEecCCHHHHHHHHHHHHHc---CCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAG--CKVLVNYARSSKEAEEVCKEIEAS---GGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G--~~v~i~~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      ++.+.|.|+ |.+|..+|..++.+|  .++++ ++++++..+....++...   .........|..              
T Consensus         5 ~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL-~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~~--------------   68 (146)
T d1ez4a1           5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVI-VDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYS--------------   68 (146)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEE-ECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGG--------------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCcEEEE-eecccchhHHHHHHHhccccccCCceEeeccHH--------------
Confidence            567888896 899999999999988  45555 688887766555555431   222333444431              


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-CCCCeEEEEcC
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMK-KKKGRIINIAS  163 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~iv~isS  163 (269)
                      .....|++|.++|.....      ...-.+.+..|..-    .+.+.+.+.+ ..++.++++|-
T Consensus        69 ~~~~adivvitag~~~~~------g~~r~~l~~~N~~i----~~~~~~~i~~~~p~aivivvtN  122 (146)
T d1ez4a1          69 DCKDADLVVITAGAPQKP------GESRLDLVNKNLNI----LSSIVKPVVDSGFDGIFLVAAN  122 (146)
T ss_dssp             GGTTCSEEEECCCC----------------CHHHHHHH----HHHHHHHHHHTTCCSEEEECSS
T ss_pred             HhccccEEEEecccccCC------CCCHHHHHHHHHHH----HHHHHHHHhhcCCCcEEEEeCC
Confidence            123789999999864321      22334455566544    4555554443 45566666653

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.37  E-value=0.00014  Score=46.65  Aligned_cols=40  Identities=33%  Similarity=0.420  Sum_probs=33.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHH
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAE   65 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~   65 (269)
                      +++++||+||+||+|....+.+...|++|+.+ .+++++.+
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~-t~s~~k~~   70 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAV-SGRESTHE   70 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEE-ESCGGGHH
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEE-ECCHHHHH
Confidence            67899999999999999999888899999885 55555443

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.33  E-value=0.00081  Score=50.34  Aligned_cols=81  Identities=21%  Similarity=0.279  Sum_probs=52.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCc-EEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCK-VLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~-v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      -.|.+|||+|+ |++|...+..+...|+. |++ +.+++++++ +++++   +... ++...=.+..+.   .+++.+..
T Consensus        27 ~~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~-~~~~~~~~~-~a~~l---Ga~~-vi~~~~~~~~~~---~~~i~~~~   96 (182)
T d1vj0a2          27 FAGKTVVIQGA-GPLGLFGVVIARSLGAENVIV-IAGSPNRLK-LAEEI---GADL-TLNRRETSVEER---RKAIMDIT   96 (182)
T ss_dssp             CBTCEEEEECC-SHHHHHHHHHHHHTTBSEEEE-EESCHHHHH-HHHHT---TCSE-EEETTTSCHHHH---HHHHHHHT
T ss_pred             CCCCEEEEECC-Cccchhheecccccccccccc-ccccccccc-ccccc---cceE-EEeccccchHHH---HHHHHHhh
Confidence            36899999997 89999999999999984 555 578877664 33333   4333 232221232333   33333332


Q ss_pred             C--CccEEEEccCC
Q 024338          103 G--TVDILINNAGI  114 (269)
Q Consensus       103 ~--~id~li~~ag~  114 (269)
                      +  ++|++|.+.|.
T Consensus        97 ~~~g~Dvvid~vG~  110 (182)
T d1vj0a2          97 HGRGADFILEATGD  110 (182)
T ss_dssp             TTSCEEEEEECSSC
T ss_pred             CCCCceEEeecCCc
Confidence            2  59999999984

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.22  E-value=0.00037  Score=51.68  Aligned_cols=82  Identities=15%  Similarity=0.195  Sum_probs=52.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      -.+.+++|+|++|++|..++..+...|...++...+++++.+. .+++   +.+. .+  |-++.+-.++..+...  -+
T Consensus        26 ~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~-~~~~---Ga~~-~i--~~~~~~~~~~~~~~~~--~~   96 (170)
T d1jvba2          26 DPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEA-AKRA---GADY-VI--NASMQDPLAEIRRITE--SK   96 (170)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHH-HHHH---TCSE-EE--ETTTSCHHHHHHHHTT--TS
T ss_pred             CCCCEEEEEeccccceeeeeecccccccccccccccchhhHHH-HHHc---CCce-ee--ccCCcCHHHHHHHHhh--cc
Confidence            3678999999999999999999999996545546777765543 3333   4332 23  3343333333322211  12


Q ss_pred             CccEEEEccCC
Q 024338          104 TVDILINNAGI  114 (269)
Q Consensus       104 ~id~li~~ag~  114 (269)
                      .+|++|.++|.
T Consensus        97 ~~d~vid~~g~  107 (170)
T d1jvba2          97 GVDAVIDLNNS  107 (170)
T ss_dssp             CEEEEEESCCC
T ss_pred             cchhhhccccc
Confidence            59999999873

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.20  E-value=0.00045  Score=51.38  Aligned_cols=75  Identities=21%  Similarity=0.311  Sum_probs=49.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      -+|+++||+||+|++|...++.....|++|+.+ .+++++.+. .   ++.+.+..+   |..+.      .+++. ...
T Consensus        26 ~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~-~~~~~~~~~-~---~~lGa~~~i---~~~~~------~~~~~-~~~   90 (171)
T d1iz0a2          26 RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAA-ASRPEKLAL-P---LALGAEEAA---TYAEV------PERAK-AWG   90 (171)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEE-ESSGGGSHH-H---HHTTCSEEE---EGGGH------HHHHH-HTT
T ss_pred             CCCCEEEEEeccccchhhhhhhhcccccccccc-ccccccccc-c---cccccceee---ehhhh------hhhhh-ccc
Confidence            478999999999999999999888899998885 555554432 2   233444322   33221      12222 234


Q ss_pred             CccEEEEccC
Q 024338          104 TVDILINNAG  113 (269)
Q Consensus       104 ~id~li~~ag  113 (269)
                      ++|++|.+.|
T Consensus        91 g~D~v~d~~G  100 (171)
T d1iz0a2          91 GLDLVLEVRG  100 (171)
T ss_dssp             SEEEEEECSC
T ss_pred             cccccccccc
Confidence            7999999876

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=97.20  E-value=0.00099  Score=49.53  Aligned_cols=80  Identities=19%  Similarity=0.287  Sum_probs=53.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      -.|.+++|.|+ |++|...+..+...|+.+++.+.+++++++. ++++   +.. .++  |.++.+ +.+.+.++..  +
T Consensus        27 ~~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~-a~~~---Ga~-~~i--~~~~~~-~~~~i~~~t~--g   95 (174)
T d1f8fa2          27 TPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLEL-AKQL---GAT-HVI--NSKTQD-PVAAIKEITD--G   95 (174)
T ss_dssp             CTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHH-HHHH---TCS-EEE--ETTTSC-HHHHHHHHTT--S
T ss_pred             CCCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHH-HHHc---CCe-EEE--eCCCcC-HHHHHHHHcC--C
Confidence            36899999998 8999999999989999988766777766543 3444   332 223  444422 3333333322  4


Q ss_pred             CccEEEEccCC
Q 024338          104 TVDILINNAGI  114 (269)
Q Consensus       104 ~id~li~~ag~  114 (269)
                      ++|++|.+.|.
T Consensus        96 g~D~vid~~G~  106 (174)
T d1f8fa2          96 GVNFALESTGS  106 (174)
T ss_dssp             CEEEEEECSCC
T ss_pred             CCcEEEEcCCc
Confidence            79999999983

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.07  E-value=0.0083  Score=43.70  Aligned_cols=116  Identities=15%  Similarity=0.135  Sum_probs=71.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-cEEEEecCCHHHHHHHHHHHHHc----CCcEEEEEccCCCHHHHHHHHHHH
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGC-KVLVNYARSSKEAEEVCKEIEAS----GGQALTFGGDVSKEADVESMIKTA   98 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~-~v~i~~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dls~~~~~~~~~~~~   98 (269)
                      ..++.+.|+|+ |.+|..+|..++.+|. .-+++++.+++..+.....+...    +........|..+           
T Consensus        18 ~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~~~-----------   85 (160)
T d1i0za1          18 VPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDYSV-----------   85 (160)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSGGG-----------
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccchhh-----------
Confidence            44567888896 9999999999999983 44555788887776666556442    2233223333332           


Q ss_pred             HHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-CCCCeEEEEcCC
Q 024338           99 VDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMK-KKKGRIINIASV  164 (269)
Q Consensus        99 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~iv~isS~  164 (269)
                         ...-|++|..||.....   ..+.   .+.++.|..-    .+.+.+.+.+ ..++-++++|--
T Consensus        86 ---~~~adiVVitAg~~~~~---g~tR---~~l~~~N~~i----~~~i~~~i~~~~p~aiiivvtNP  139 (160)
T d1i0za1          86 ---TANSKIVVVTAGVRQQE---GESR---LNLVQRNVNV----FKFIIPQIVKYSPDCIIIVVSNP  139 (160)
T ss_dssp             ---GTTCSEEEECCSCCCCT---TCCG---GGGHHHHHHH----HHHHHHHHHHHCTTCEEEECSSS
T ss_pred             ---cccccEEEEecCCcccc---Ccch---HHHHHHHHHH----HHHHHHHHHhcCCCcEEEEeCCc
Confidence               23789999999975321   1121   2344455543    5555665544 456777777653

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.07  E-value=0.0047  Score=44.77  Aligned_cols=115  Identities=17%  Similarity=0.208  Sum_probs=65.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCc--------EEEEecCCHHHHHHHHHHHHHcC-CcEEEEEccCCCHHHHHHHHHHH
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGCK--------VLVNYARSSKEAEEVCKEIEASG-GQALTFGGDVSKEADVESMIKTA   98 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~~--------v~i~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dls~~~~~~~~~~~~   98 (269)
                      .|.|+||+|.+|..++..|+..+.-        .++...++.+.++....++.... .....+...-.+    .+     
T Consensus         6 KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-----   76 (154)
T d1y7ta1           6 RVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDP----KV-----   76 (154)
T ss_dssp             EEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCH----HH-----
T ss_pred             EEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCCch----hh-----
Confidence            6999999999999999999987531        12223344455555555554332 223333222111    12     


Q ss_pred             HHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-C-CCCeEEEEcC
Q 024338           99 VDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMK-K-KKGRIINIAS  163 (269)
Q Consensus        99 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~-~~~~iv~isS  163 (269)
                        .+...|++|.++|....   ...+   -++.+..|+.-    .+.+.+.+.+ . +...++.+|.
T Consensus        77 --~~~~advViitaG~~~~---pg~~---r~dl~~~N~~i----~~~~~~~i~k~a~~~~~vivvsN  131 (154)
T d1y7ta1          77 --AFKDADYALLVGAAPRK---AGME---RRDLLQVNGKI----FTEQGRALAEVAKKDVKVLVVGN  131 (154)
T ss_dssp             --HTTTCSEEEECCCCCCC---TTCC---HHHHHHHHHHH----HHHHHHHHHHHSCTTCEEEECSS
T ss_pred             --hcccccEEEeecCcCCC---CCCc---HHHHHHHHHHH----HHHHHHHHHHhCCCCcEEEEecC
Confidence              22378999999997533   1223   34445556554    5555555544 2 3456666653

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.04  E-value=0.0011  Score=47.66  Aligned_cols=116  Identities=21%  Similarity=0.239  Sum_probs=65.7

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC-cEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCcc
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGC-KVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVD  106 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~-~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id  106 (269)
                      .+.|+||+|.+|.++|..++.+|. .-+++.+.++.+.+.  ..+..... ......-+ ...+..+.++       .-|
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a--~Dl~~~~~-~~~~~~~~-~~~~~~~~~~-------~aD   70 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVA--ADLSHIET-RATVKGYL-GPEQLPDCLK-------GCD   70 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHH--HHHTTSSS-SCEEEEEE-SGGGHHHHHT-------TCS
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhh--HHHhhhhh-hcCCCeEE-cCCChHHHhC-------CCC
Confidence            478999999999999999999884 545446666544332  23322111 11111111 1222333332       789


Q ss_pred             EEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-CCCCeEEEEcCC
Q 024338          107 ILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMK-KKKGRIINIASV  164 (269)
Q Consensus       107 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~iv~isS~  164 (269)
                      ++|..+|......   .+   -.+.++.|..-.    +.+.+.+.+ .+++.++++|.-
T Consensus        71 ivVitag~~~~~g---~s---R~~ll~~N~~i~----~~i~~~i~~~~p~~iiivvtNP  119 (144)
T d1mlda1          71 VVVIPAGVPRKPG---MT---RDDLFNTNATIV----ATLTAACAQHCPDAMICIISNP  119 (144)
T ss_dssp             EEEECCSCCCCTT---CC---GGGGHHHHHHHH----HHHHHHHHHHCTTSEEEECSSC
T ss_pred             EEEECCCcCCCCC---CC---cchHHHHHHHHH----HHHHHHHHhcCCCeEEEEecCc
Confidence            9999999643211   12   233566666654    444444433 456777777653

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.00  E-value=0.0006  Score=48.32  Aligned_cols=73  Identities=15%  Similarity=0.209  Sum_probs=52.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCcc
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVD  106 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id  106 (269)
                      |.++|.|+ |.+|+.+++.|.++|..|++ +..+++..+++.+    .+  ...+.+|.++++.++++-      ....|
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvv-id~d~~~~~~~~~----~~--~~~~~gd~~~~~~l~~a~------i~~a~   66 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLA-VDINEEKVNAYAS----YA--THAVIANATEENELLSLG------IRNFE   66 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEE-EESCHHHHHHTTT----TC--SEEEECCTTCTTHHHHHT------GGGCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEE-ecCcHHHHHHHHH----hC--CcceeeecccchhhhccC------Ccccc
Confidence            45777776 79999999999999999988 5788877765532    22  345678999987666541      12568


Q ss_pred             EEEEccC
Q 024338          107 ILINNAG  113 (269)
Q Consensus       107 ~li~~ag  113 (269)
                      .+|...+
T Consensus        67 ~vi~~~~   73 (134)
T d2hmva1          67 YVIVAIG   73 (134)
T ss_dssp             EEEECCC
T ss_pred             EEEEEcC
Confidence            7776654

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.00  E-value=0.0055  Score=43.99  Aligned_cols=116  Identities=13%  Similarity=0.130  Sum_probs=66.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcC-CcEEEEecCCHHHHHHHHHHHHHc----CCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAG-CKVLVNYARSSKEAEEVCKEIEAS----GGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G-~~v~i~~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      |.+.|+|+ |.+|..+|..++.+| +.-+++.+.+++.++.....+.+.    .........|..+              
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~~~--------------   66 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDWAA--------------   66 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCGGG--------------
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccCHHH--------------
Confidence            66778895 899999999999988 344445788888766555555432    2233333333211              


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-CCCCeEEEEcC
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMK-KKKGRIINIAS  163 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~iv~isS  163 (269)
                      +..-|++|.+||.....  .+.+...-.+.++.|..    +.+.+.+.+.+ .+.+.++++|-
T Consensus        67 l~~adiVVitaG~~~~~--~~~~g~~R~~l~~~N~~----i~~~i~~~i~~~~p~aivivvtN  123 (146)
T d1hyha1          67 LADADVVISTLGNIKLQ--QDNPTGDRFAELKFTSS----MVQSVGTNLKESGFHGVLVVISN  123 (146)
T ss_dssp             GTTCSEEEECCSCGGGT--C-------CTTHHHHHH----HHHHHHHHHHHTTCCSEEEECSS
T ss_pred             hccccEEEEeccccccc--cccCCccHHHHHHHHHH----HHHHHHHHHhhcCCCeEEEEecC
Confidence            12689999999964211  11111122233445543    45566665544 35667777764

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=96.97  E-value=0.01  Score=43.84  Aligned_cols=115  Identities=15%  Similarity=0.093  Sum_probs=63.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcC---Cc--E-EEEecCCH--HHHHHHHHHHHHcCC-cEEEEEccCCCHHHHHHHHHH
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAG---CK--V-LVNYARSS--KEAEEVCKEIEASGG-QALTFGGDVSKEADVESMIKT   97 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G---~~--v-~i~~~r~~--~~~~~~~~~l~~~~~-~~~~~~~Dls~~~~~~~~~~~   97 (269)
                      ..|.||||+|.||++++..|++..   ..  + +.+...+.  +.++.+.-++..... ....+..- ++.   .     
T Consensus        25 ~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~-~~~---~-----   95 (175)
T d7mdha1          25 VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIG-IDP---Y-----   95 (175)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEE-SCH---H-----
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCcccc-ccc---h-----
Confidence            469999999999999999999753   21  2 22234333  344555545544321 12111110 121   1     


Q ss_pred             HHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-CC-CCeEEEEc
Q 024338           98 AVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMK-KK-KGRIINIA  162 (269)
Q Consensus        98 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~-~~~iv~is  162 (269)
                        +.+...|++|..+|....      +.+...+.++.|..-    .+.+.+.+.+ .+ ...|+.+|
T Consensus        96 --~~~~~aDvVvi~ag~~rk------pg~tR~Dll~~N~~I----~k~~~~~i~~~a~~~~~vlvv~  150 (175)
T d7mdha1          96 --EVFEDVDWALLIGAKPRG------PGMERAALLDINGQI----FADQGKALNAVASKNVKVLVVG  150 (175)
T ss_dssp             --HHTTTCSEEEECCCCCCC------TTCCHHHHHHHHHHH----HHHHHHHHHHHSCTTCEEEECS
T ss_pred             --hhccCCceEEEeeccCCC------CCCcHHHHHHHHHHH----HHHHHHHHHhhCCCCcEEEEec
Confidence              223389999999987532      122344566666554    5555555544 23 45566664

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=96.92  E-value=0.0011  Score=49.32  Aligned_cols=81  Identities=19%  Similarity=0.302  Sum_probs=52.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      +|.+|+|.|+ +|+|...+..+...|+..++.+.+++++.+. ..++   +....+...|-.  +.+.+..++...  ++
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~-a~~~---Ga~~~i~~~~~~--~~~~~~~~~~~~--~G   98 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAK-AKEV---GATECVNPQDYK--KPIQEVLTEMSN--GG   98 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHH-HHHT---TCSEEECGGGCS--SCHHHHHHHHTT--SC
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHH-HHHh---CCeeEEecCCch--hHHHHHHHHHhc--CC
Confidence            6799999999 6899999999999997666657888877653 3332   333322222222  223333333322  47


Q ss_pred             ccEEEEccCC
Q 024338          105 VDILINNAGI  114 (269)
Q Consensus       105 id~li~~ag~  114 (269)
                      +|++|.+.|.
T Consensus        99 ~D~vid~~G~  108 (176)
T d2jhfa2          99 VDFSFEVIGR  108 (176)
T ss_dssp             BSEEEECSCC
T ss_pred             CCEEEecCCc
Confidence            9999999984

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=96.88  E-value=0.00063  Score=50.73  Aligned_cols=78  Identities=17%  Similarity=0.145  Sum_probs=50.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC-
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG-  103 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~-  103 (269)
                      .|.+|+|.|+ |++|...++.+...|+..++.+++++++++ +++++   +... +  .|.++.+ ..   +++.+..+ 
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~-~a~~l---Ga~~-~--i~~~~~~-~~---~~v~~~t~g   94 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVE-AAKFY---GATD-I--LNYKNGH-IE---DQVMKLTNG   94 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHH-HHHHH---TCSE-E--ECGGGSC-HH---HHHHHHTTT
T ss_pred             CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHH-HHHhh---Cccc-c--ccccchh-HH---HHHHHHhhc
Confidence            5889999986 899999999998899854444677776654 33434   3322 2  2444322 22   23333222 


Q ss_pred             -CccEEEEccCC
Q 024338          104 -TVDILINNAGI  114 (269)
Q Consensus       104 -~id~li~~ag~  114 (269)
                       .+|++|.++|.
T Consensus        95 ~G~D~vid~~g~  106 (174)
T d1jqba2          95 KGVDRVIMAGGG  106 (174)
T ss_dssp             SCEEEEEECSSC
T ss_pred             cCcceEEEccCC
Confidence             59999999984

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.88  E-value=0.0019  Score=47.80  Aligned_cols=79  Identities=11%  Similarity=0.176  Sum_probs=50.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      .|.+++|.|+ |++|...+..+...|+.+++.+++++++++...    +.+... ++  |-+ .+.++...+...  -.+
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~----~~ga~~-~i--~~~-~~~~~~~~~~~~--~~g  100 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE----RLGADH-VV--DAR-RDPVKQVMELTR--GRG  100 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH----HTTCSE-EE--ETT-SCHHHHHHHHTT--TCC
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHh----hcccce-ee--cCc-ccHHHHHHHhhC--CCC
Confidence            5799999986 999999999888899877666778776654332    233332 23  222 233333332211  126


Q ss_pred             ccEEEEccCC
Q 024338          105 VDILINNAGI  114 (269)
Q Consensus       105 id~li~~ag~  114 (269)
                      +|++|.++|.
T Consensus       101 ~d~vid~~g~  110 (172)
T d1h2ba2         101 VNVAMDFVGS  110 (172)
T ss_dssp             EEEEEESSCC
T ss_pred             ceEEEEecCc
Confidence            9999999983

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.86  E-value=0.0007  Score=44.89  Aligned_cols=77  Identities=13%  Similarity=0.201  Sum_probs=50.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      .+++||+++|.|. |.-|.++|+.|.++|++|.+...+..+...+   +++   ........+.. .    ..++     
T Consensus         1 ~~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~~~---~~~---~~~~~~~~~~~-~----~~~~-----   63 (93)
T d2jfga1           1 ADYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPGLD---KLP---EAVERHTGSLN-D----EWLM-----   63 (93)
T ss_dssp             CCCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTTGG---GSC---TTSCEEESBCC-H----HHHH-----
T ss_pred             CCcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchhHH---HHh---hccceeecccc-h----hhhc-----
Confidence            3789999999998 5789999999999999999975554432221   111   11222222322 1    1122     


Q ss_pred             cCCccEEEEccCCCCC
Q 024338          102 WGTVDILINNAGITRD  117 (269)
Q Consensus       102 ~~~id~li~~ag~~~~  117 (269)
                        .+|.+|...|+...
T Consensus        64 --~~d~vi~SPGi~~~   77 (93)
T d2jfga1          64 --AADLIVASPGIALA   77 (93)
T ss_dssp             --HCSEEEECTTSCTT
T ss_pred             --cCCEEEECCCCCCC
Confidence              67999999998644

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=96.84  E-value=0.0075  Score=43.05  Aligned_cols=109  Identities=18%  Similarity=0.268  Sum_probs=59.8

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCC--cEEEEecCCHHHHHHHHHHHHHc---CCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           29 AVVTGASRGIGRAVATSLGKAGC--KVLVNYARSSKEAEEVCKEIEAS---GGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        29 vlItGas~giG~~~a~~l~~~G~--~v~i~~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      +.|+|+ |.+|..++..++.+|.  ++++ ++++++.++....++...   .........|   .           +...
T Consensus         4 I~IIGa-G~VG~~~a~~l~~~~l~~el~L-~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~---~-----------~~~~   67 (142)
T d1y6ja1           4 VAIIGA-GFVGASAAFTMALRQTANELVL-IDVFKEKAIGEAMDINHGLPFMGQMSLYAGD---Y-----------SDVK   67 (142)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCSSEEEE-ECCC---CCHHHHHHTTSCCCTTCEEEC--C---G-----------GGGT
T ss_pred             EEEECC-CHHHHHHHHHHHhcCCCCEEEE-EeccCCccceeeeeeccCcccCCCeeEeeCc---H-----------HHhC
Confidence            556687 9999999999999873  4554 688877655545555432   1122222111   1           1123


Q ss_pred             CccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-CCCCeEEEEcC
Q 024338          104 TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMK-KKKGRIINIAS  163 (269)
Q Consensus       104 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~iv~isS  163 (269)
                      .-|++|..||.....      .+.-.+.++.|..-    .+.+.+.+.+ .+++.++++|-
T Consensus        68 ~adivvitag~~~~~------~~~r~~l~~~N~~i----~~~i~~~i~~~~p~ai~ivvtN  118 (142)
T d1y6ja1          68 DCDVIVVTAGANRKP------GETRLDLAKKNVMI----AKEVTQNIMKYYNHGVILVVSN  118 (142)
T ss_dssp             TCSEEEECCCC------------CHHHHHHHHHHH----HHHHHHHHHHHCCSCEEEECSS
T ss_pred             CCceEEEecccccCc------CcchhHHhhHHHHH----HHHHHHHhhccCCCceEEEecC
Confidence            689999999864321      12234556666654    4455554443 45677777764

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.82  E-value=0.0013  Score=48.72  Aligned_cols=80  Identities=21%  Similarity=0.248  Sum_probs=52.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      +|.+|+|.|+ +|+|...+..+...|+.+++.+++++++.+ +.+++   +.+..+..-|  +.+.+.+.+.+..  .++
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~-~ak~l---Ga~~~i~~~~--~~~~~~~~~~~~~--~~g   98 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFA-RAKEF---GATECINPQD--FSKPIQEVLIEMT--DGG   98 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHH-HHHHH---TCSEEECGGG--CSSCHHHHHHHHT--TSC
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHH-HHHHh---CCcEEEeCCc--hhhHHHHHHHHHc--CCC
Confidence            6899999998 599999999999999887776677776653 45454   3333221111  1122333333332  237


Q ss_pred             ccEEEEccC
Q 024338          105 VDILINNAG  113 (269)
Q Consensus       105 id~li~~ag  113 (269)
                      +|++|.+.|
T Consensus        99 ~D~vid~~G  107 (176)
T d2fzwa2          99 VDYSFECIG  107 (176)
T ss_dssp             BSEEEECSC
T ss_pred             CcEeeecCC
Confidence            999999998

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=96.82  E-value=0.018  Score=40.98  Aligned_cols=112  Identities=13%  Similarity=0.113  Sum_probs=66.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcC-CcEEEEecCC--HHHHHHHHHHHHH---cCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           28 VAVVTGASRGIGRAVATSLGKAG-CKVLVNYARS--SKEAEEVCKEIEA---SGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G-~~v~i~~~r~--~~~~~~~~~~l~~---~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      .+.|+|++|.+|..+|..++.+| ++-+++.+.+  ++..+....++..   ......+...|..+              
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~~~--------------   67 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYED--------------   67 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGGG--------------
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCHHH--------------
Confidence            47899999999999999999998 3334445643  3334333334432   12333333333321              


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCCeEEEEcC
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKK-KKGRIINIAS  163 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~iv~isS  163 (269)
                      ...-|++|..||.....      .+.-.+.++.|..=    .+.+.+.+.+. .++.++.+|-
T Consensus        68 ~~~aDiVvitaG~~~~~------g~~R~dl~~~N~~I----~~~i~~~i~~~~p~~i~ivvtN  120 (142)
T d1o6za1          68 TAGSDVVVITAGIPRQP------GQTRIDLAGDNAPI----MEDIQSSLDEHNDDYISLTTSN  120 (142)
T ss_dssp             GTTCSEEEECCCCCCCT------TCCHHHHHHHHHHH----HHHHHHHHHTTCSCCEEEECCS
T ss_pred             hhhcCEEEEeccccccc------CCchhhHHHHHHHH----HHHHHHHHHhcCCCceEEEecC
Confidence            23789999999964321      12234566666654    56666666543 4566776654

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=96.75  E-value=0.0028  Score=46.64  Aligned_cols=75  Identities=16%  Similarity=0.252  Sum_probs=51.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      -.|.+|+|.|+ |++|...++.....|++++++ .+++++. ++.+++   +.+..   .|..+.+....       ...
T Consensus        29 ~~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~-~~~~~~~-~~a~~l---Gad~~---i~~~~~~~~~~-------~~~   92 (168)
T d1uufa2          29 GPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAF-TTSEAKR-EAAKAL---GADEV---VNSRNADEMAA-------HLK   92 (168)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEE-ESSGGGH-HHHHHH---TCSEE---EETTCHHHHHT-------TTT
T ss_pred             CCCCEEEEecc-chHHHHHHHHhhcccccchhh-ccchhHH-HHHhcc---CCcEE---EECchhhHHHH-------hcC
Confidence            36899999986 899999998888899999885 5555544 344444   44322   35555443221       224


Q ss_pred             CccEEEEccCC
Q 024338          104 TVDILINNAGI  114 (269)
Q Consensus       104 ~id~li~~ag~  114 (269)
                      ++|++|.+.|.
T Consensus        93 ~~D~vid~~g~  103 (168)
T d1uufa2          93 SFDFILNTVAA  103 (168)
T ss_dssp             CEEEEEECCSS
T ss_pred             CCceeeeeeec
Confidence            79999999984

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.74  E-value=0.0014  Score=45.03  Aligned_cols=60  Identities=15%  Similarity=0.134  Sum_probs=43.0

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCC
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVS   86 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls   86 (269)
                      ..+++||++||.|++ .+|..-++.|++.|+++++......+....+.+     ..++....-+++
T Consensus         7 ~l~l~~k~vlVvG~G-~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~-----~~~i~~~~~~~~   66 (113)
T d1pjqa1           7 FCQLRDRDCLIVGGG-DVAERKARLLLEAGARLTVNALTFIPQFTVWAN-----EGMLTLVEGPFD   66 (113)
T ss_dssp             EECCBTCEEEEECCS-HHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHT-----TTSCEEEESSCC
T ss_pred             EEEeCCCEEEEECCC-HHHHHHHHHHHHCCCeEEEEeccCChHHHHHHh-----cCCceeeccCCC
Confidence            358899999999987 699999999999999999865444444443332     234555554444

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.74  E-value=0.03  Score=39.92  Aligned_cols=111  Identities=21%  Similarity=0.226  Sum_probs=62.2

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcC--CcEEEEecCCHH--HHHHHHHHHHH----cCCcEEE--EEccCCCHHHHHHHHHH
Q 024338           28 VAVVTGASRGIGRAVATSLGKAG--CKVLVNYARSSK--EAEEVCKEIEA----SGGQALT--FGGDVSKEADVESMIKT   97 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G--~~v~i~~~r~~~--~~~~~~~~l~~----~~~~~~~--~~~Dls~~~~~~~~~~~   97 (269)
                      .+.|+||+|.+|..+|..++.+|  .++++ .++++.  ..+....++..    .......  ...+  |.         
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L-~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~--d~---------   69 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVL-IGREHSINKLEGLREDIYDALAGTRSDANIYVESDE--NL---------   69 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEE-EECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETT--CG---------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCccccccc-ccchhhhHhhhcccccchhcccccccCCccccCCcc--hH---------
Confidence            38899999999999999999998  34444 566542  33434444432    1222222  2221  11         


Q ss_pred             HHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEc
Q 024338           98 AVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIA  162 (269)
Q Consensus        98 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~is  162 (269)
                        +.+..-|++|.+||.....   ..+   -.+.++.|..-    .+.+.+.+.+.....++.+|
T Consensus        70 --~~l~~aDvVVitAG~~~~~---g~s---R~dl~~~Na~i----v~~i~~~i~~~~~~~iivVt  122 (145)
T d1hyea1          70 --RIIDESDVVIITSGVPRKE---GMS---RMDLAKTNAKI----VGKYAKKIAEICDTKIFVIT  122 (145)
T ss_dssp             --GGGTTCSEEEECCSCCCCT---TCC---HHHHHHHHHHH----HHHHHHHHHHHCCCEEEECS
T ss_pred             --HHhccceEEEEecccccCC---CCC---hhhhhhhhHHH----HHHHHHHHhccCCCeEEEEc
Confidence              1223789999999964321   123   23455666654    44445544333334555453

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=96.70  E-value=0.0026  Score=45.89  Aligned_cols=84  Identities=13%  Similarity=0.072  Sum_probs=54.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      ++..-|++.|+||.|.+|..+++.|.++|++|.+. +++.....+..    ....+..+...+   ..++...+.++...
T Consensus         5 ~~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~-d~~~~~~~~~~----~~~~~~v~~~~~---~~~~~~v~~~~~~~   76 (152)
T d2pv7a2           5 INSDIHKIVIVGGYGKLGGLFARYLRASGYPISIL-DREDWAVAESI----LANADVVIVSVP---INLTLETIERLKPY   76 (152)
T ss_dssp             SCTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEE-CTTCGGGHHHH----HTTCSEEEECSC---GGGHHHHHHHHGGG
T ss_pred             cCCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEec-ccccccccchh----hhhccccccccc---hhhheeeeeccccc
Confidence            45566889999999999999999999999999995 66544332211    113344333333   44566666676665


Q ss_pred             cCCccEEEEccC
Q 024338          102 WGTVDILINNAG  113 (269)
Q Consensus       102 ~~~id~li~~ag  113 (269)
                      ..+=.+++....
T Consensus        77 ~~~~~iiiD~~S   88 (152)
T d2pv7a2          77 LTENMLLADLTS   88 (152)
T ss_dssp             CCTTSEEEECCS
T ss_pred             ccCCceEEEecc
Confidence            444345565554

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.69  E-value=0.0094  Score=44.09  Aligned_cols=82  Identities=17%  Similarity=0.225  Sum_probs=52.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      -.|.+|+|.|+ ||+|...+..+...|+..++.+++++++++ +++++   +.+..+-.-|-.+.  .+...+.. . -.
T Consensus        28 ~~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~-~Ak~~---GA~~~in~~~~~~~--~~~~~~~~-~-g~   98 (176)
T d1d1ta2          28 KPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFE-KAMAV---GATECISPKDSTKP--ISEVLSEM-T-GN   98 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHH-HHHHH---TCSEEECGGGCSSC--HHHHHHHH-H-TS
T ss_pred             CCCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHH-HHHhc---CCcEEECccccchH--HHHHHHHh-c-cc
Confidence            36899999986 899999999999999754444688887775 44444   44443322232221  12222211 1 23


Q ss_pred             CccEEEEccCC
Q 024338          104 TVDILINNAGI  114 (269)
Q Consensus       104 ~id~li~~ag~  114 (269)
                      ++|++|.+.|.
T Consensus        99 G~d~vi~~~g~  109 (176)
T d1d1ta2          99 NVGYTFEVIGH  109 (176)
T ss_dssp             CCCEEEECSCC
T ss_pred             cceEEEEeCCc
Confidence            79999999984

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=96.68  E-value=0.045  Score=38.80  Aligned_cols=111  Identities=14%  Similarity=0.157  Sum_probs=64.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC-cEEEEecCCHHHHHHHHHHHHHc---CCcEEEE-EccCCCHHHHHHHHHHHHHhc
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGC-KVLVNYARSSKEAEEVCKEIEAS---GGQALTF-GGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~-~v~i~~~r~~~~~~~~~~~l~~~---~~~~~~~-~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      .+.|+|+ |.+|.++|..++.+|. .-+++.+.+++..+.....++..   .....+. ..|..+              .
T Consensus         3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~~~~~--------------~   67 (143)
T d1llda1           3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPEI--------------C   67 (143)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGGG--------------G
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCCCHHH--------------h
Confidence            3667797 9999999999999883 33444688887766555555432   1122222 222211              1


Q ss_pred             CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-CCCCeEEEEcC
Q 024338          103 GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMK-KKKGRIINIAS  163 (269)
Q Consensus       103 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~iv~isS  163 (269)
                      ..-|++|..||.....   ..+.   .+.+..|..=    .+.+.+.+.+ .+++.++++|-
T Consensus        68 ~daDvVVitaG~~~~~---g~~R---~dl~~~N~~i----~~~i~~~i~~~~p~ai~ivvtN  119 (143)
T d1llda1          68 RDADMVVITAGPRQKP---GQSR---LELVGATVNI----LKAIMPNLVKVAPNAIYMLITN  119 (143)
T ss_dssp             TTCSEEEECCCCCCCT---TCCH---HHHHHHHHHH----HHHHHHHHHHHCTTSEEEECCS
T ss_pred             hCCcEEEEecccccCC---CCch---hhhhhhhHHH----HHHHHHHHHhhCCCeEEEEeCC
Confidence            2679999999964321   1232   3456666654    4444444433 45667777764

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.68  E-value=0.025  Score=41.01  Aligned_cols=115  Identities=17%  Similarity=0.218  Sum_probs=68.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-cEEEEecCCHHHHHHHHHHHHHc----CCcEEEEEccCCCHHHHHHHHHHH
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGC-KVLVNYARSSKEAEEVCKEIEAS----GGQALTFGGDVSKEADVESMIKTA   98 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~-~v~i~~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dls~~~~~~~~~~~~   98 (269)
                      ++...+.|+|+ |.+|..+|..++.+|. +-+++.+++++.++.....+...    +........|..            
T Consensus        17 ~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~~------------   83 (159)
T d2ldxa1          17 LSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDYN------------   83 (159)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSGG------------
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccchh------------
Confidence            34445778896 9999999999999883 33444788888776666666543    223323333332            


Q ss_pred             HHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hCCCCeEEEEcC
Q 024338           99 VDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMM-KKKKGRIINIAS  163 (269)
Q Consensus        99 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~-~~~~~~iv~isS  163 (269)
                        ....-|++|..||..........      +.++.|..-    .+.+.+.+. ...++.++++|.
T Consensus        84 --~~~~adivvitag~~~~~~~~R~------dll~~N~~i----~~~i~~~i~~~~p~~ivivvtN  137 (159)
T d2ldxa1          84 --VSANSKLVIITAGARMVSGQTRL------DLLQRNVAI----MKAIVPGVIQNSPDCKIIVVTN  137 (159)
T ss_dssp             --GGTTEEEEEECCSCCCCTTTCSS------CTTHHHHHH----HHHHTTTHHHHSTTCEEEECSS
T ss_pred             --hhccccEEEEecccccCCCCCHH------HHHHHHHHH----HHHHHHHHhccCCCeEEEEeCC
Confidence              12378999999986543221111      123334433    455555443 356777887765

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.67  E-value=0.006  Score=44.75  Aligned_cols=78  Identities=18%  Similarity=0.187  Sum_probs=50.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      -.|.+++|.|+ |++|...++.+...|++|+++ ++++++++. ++++   +.+..+..-+-.+.   .      ....+
T Consensus        26 ~~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~-~~~~~k~~~-a~~l---Ga~~~i~~~~~~~~---~------~~~~~   90 (168)
T d1piwa2          26 GPGKKVGIVGL-GGIGSMGTLISKAMGAETYVI-SRSSRKRED-AMKM---GADHYIATLEEGDW---G------EKYFD   90 (168)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHHTCEEEEE-ESSSTTHHH-HHHH---TCSEEEEGGGTSCH---H------HHSCS
T ss_pred             CCCCEEEEECC-CCcchhHHHHhhhcccccccc-ccchhHHHH-hhcc---CCcEEeeccchHHH---H------Hhhhc
Confidence            36899999997 899999888888899998884 666665543 3333   44433322222221   1      12234


Q ss_pred             CccEEEEccCCCC
Q 024338          104 TVDILINNAGITR  116 (269)
Q Consensus       104 ~id~li~~ag~~~  116 (269)
                      .+|+++.+.+...
T Consensus        91 ~~d~vi~~~~~~~  103 (168)
T d1piwa2          91 TFDLIVVCASSLT  103 (168)
T ss_dssp             CEEEEEECCSCST
T ss_pred             ccceEEEEecCCc
Confidence            7999999887543

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.67  E-value=0.0027  Score=47.10  Aligned_cols=83  Identities=17%  Similarity=0.210  Sum_probs=52.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      --.|.+|+|.|+ |+||...+..+...|+..++.+.+++++++ +.+++   +... ++...-.+ +..+.......  .
T Consensus        26 v~~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~-~a~~~---Ga~~-~i~~~~~~-~~~~~~~~~~~--~   96 (174)
T d1e3ia2          26 VTPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFP-KAKAL---GATD-CLNPRELD-KPVQDVITELT--A   96 (174)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHH-HHHHT---TCSE-EECGGGCS-SCHHHHHHHHH--T
T ss_pred             CCCCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHH-HHHHh---CCCc-ccCCccch-hhhhhhHhhhh--c
Confidence            346899999975 999999999999999976665777777653 44443   3322 22211111 22333333222  2


Q ss_pred             CCccEEEEccCC
Q 024338          103 GTVDILINNAGI  114 (269)
Q Consensus       103 ~~id~li~~ag~  114 (269)
                      +++|++|.++|.
T Consensus        97 ~G~d~vie~~G~  108 (174)
T d1e3ia2          97 GGVDYSLDCAGT  108 (174)
T ss_dssp             SCBSEEEESSCC
T ss_pred             CCCcEEEEeccc
Confidence            479999999983

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=96.62  E-value=0.00075  Score=49.97  Aligned_cols=101  Identities=19%  Similarity=0.214  Sum_probs=62.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh-c-
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA-W-  102 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~-~-  102 (269)
                      ++.+|||+||+||+|...++.....|++|+.+ .+++++.+. +++   .+.+..+..      +   ....+.... . 
T Consensus        23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat-~~s~~k~~~-~~~---lGad~vi~~------~---~~~~~~~~~~~~   88 (167)
T d1tt7a2          23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVAS-TGNREAADY-LKQ---LGASEVISR------E---DVYDGTLKALSK   88 (167)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEE-ESSSSTHHH-HHH---HTCSEEEEH------H---HHCSSCCCSSCC
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCceEEE-ecCHHHHHH-HHh---hcccceEec------c---chhchhhhcccC
Confidence            46789999999999999998888889999986 455544433 223   344443221      1   111111111 1 


Q ss_pred             CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccc
Q 024338          103 GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGL  167 (269)
Q Consensus       103 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~  167 (269)
                      +++|++|.+.|..           .               ....+..+  +..|+++.++...+.
T Consensus        89 ~gvd~vid~vgg~-----------~---------------~~~~~~~l--~~~G~iv~~G~~~g~  125 (167)
T d1tt7a2          89 QQWQGAVDPVGGK-----------Q---------------LASLLSKI--QYGGSVAVSGLTGGG  125 (167)
T ss_dssp             CCEEEEEESCCTH-----------H---------------HHHHHTTE--EEEEEEEECCCSSCS
T ss_pred             CCceEEEecCcHH-----------H---------------HHHHHHHh--ccCceEEEeeccCCC
Confidence            3699999998731           1               22233333  567899999887664

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.61  E-value=0.03  Score=39.59  Aligned_cols=111  Identities=18%  Similarity=0.235  Sum_probs=65.1

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC-cEEEEecCCHHHHHHHHHHHHHc---CCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGC-KVLVNYARSSKEAEEVCKEIEAS---GGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~-~v~i~~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      .+.|+|+ |.+|..++..++.++. .-+++.+.+++.++....++...   .........|..              .+.
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~~--------------~~~   66 (140)
T d1a5za1           2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDYA--------------DLK   66 (140)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCGG--------------GGT
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCcHH--------------Hhc
Confidence            3667797 8999999999998872 33444688887776555554432   222333333321              113


Q ss_pred             CccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-CCCCeEEEEcC
Q 024338          104 TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMK-KKKGRIINIAS  163 (269)
Q Consensus       104 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~iv~isS  163 (269)
                      .-|++|.+||.....   ..+.   .+.+..|..    +++.+.+.+.+ .+++.++++|-
T Consensus        67 ~adivvitag~~~~~---g~~r---~dl~~~N~~----I~~~i~~~i~~~~p~aivivvtN  117 (140)
T d1a5za1          67 GSDVVIVAAGVPQKP---GETR---LQLLGRNAR----VMKEIARNVSKYAPDSIVIVVTN  117 (140)
T ss_dssp             TCSEEEECCCCCCCS---SCCH---HHHHHHHHH----HHHHHHHHHHHHCTTCEEEECSS
T ss_pred             CCCEEEEecccccCC---Ccch---hhhhccccc----hHHHHHHHHHhcCCCcEEEEeCC
Confidence            689999999965332   1222   334444543    45555665544 45667777664

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=96.59  E-value=0.0012  Score=49.27  Aligned_cols=102  Identities=20%  Similarity=0.208  Sum_probs=62.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      .+.++||+||+||+|...++.....|++|+.+ .+++++.+ ..+++   +.+..+-+-|....    +   ++.+  ..
T Consensus        31 ~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~-~~~~~k~~-~~~~l---Gad~vi~~~~~~~~----~---~l~~--~~   96 (177)
T d1o89a2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAV-SGRESTHE-YLKSL---GASRVLPRDEFAES----R---PLEK--QV   96 (177)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEE-ESCGGGHH-HHHHH---TEEEEEEGGGSSSC----C---SSCC--CC
T ss_pred             CCCcEEEEEccccchHHHHHHHHHcCCCeEEE-ecchhHHH-HHHhh---ccccccccccHHHH----H---HHHh--hc
Confidence            45689999999999999998888899999985 56665543 33333   33332222121111    0   1111  24


Q ss_pred             ccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCcccc
Q 024338          105 VDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLV  168 (269)
Q Consensus       105 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~  168 (269)
                      .|.+|.+.|.           +.               ....++.+  +.+|+++.++...+..
T Consensus        97 ~~~vvD~Vgg-----------~~---------------~~~~l~~l--~~~Griv~~G~~~~~~  132 (177)
T d1o89a2          97 WAGAIDTVGD-----------KV---------------LAKVLAQM--NYGGCVAACGLAGGFT  132 (177)
T ss_dssp             EEEEEESSCH-----------HH---------------HHHHHHTE--EEEEEEEECCCTTCSC
T ss_pred             CCeeEEEcch-----------HH---------------HHHHHHHh--ccccceEeecccCCcc
Confidence            6888887761           11               23344444  5678999998876654

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.47  E-value=0.011  Score=43.72  Aligned_cols=85  Identities=14%  Similarity=0.196  Sum_probs=61.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHH---------------HHHcCCcEEEEEccCCCHHHH
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKE---------------IEASGGQALTFGGDVSKEADV   91 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~---------------l~~~~~~~~~~~~Dls~~~~~   91 (269)
                      +.+-|.|. |.+|..+|+.|+++|++|.+ ..|++++.+++.++               +.+.-.....+...+.+.+.+
T Consensus         3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v-~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~~~~v   80 (176)
T d2pgda2           3 ADIALIGL-AVMGQNLILNMNDHGFVVCA-FNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAV   80 (176)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEE-ECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHH
T ss_pred             CcEEEEeE-hHHHHHHHHHHHHCCCeEEE-EcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEecCchHHH
Confidence            45677777 79999999999999999998 58988888776543               111112223444566777888


Q ss_pred             HHHHHHHHHhcCCccEEEEccC
Q 024338           92 ESMIKTAVDAWGTVDILINNAG  113 (269)
Q Consensus        92 ~~~~~~~~~~~~~id~li~~ag  113 (269)
                      ....+.+.....+=+++|.+..
T Consensus        81 ~~v~~~l~~~~~~g~iiid~sT  102 (176)
T d2pgda2          81 DNFIEKLVPLLDIGDIIIDGGN  102 (176)
T ss_dssp             HHHHHHHHHHCCTTCEEEECSC
T ss_pred             HHHHHHHHhccccCcEEEecCc
Confidence            8888888887666667777664

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.45  E-value=0.0028  Score=46.73  Aligned_cols=46  Identities=24%  Similarity=0.406  Sum_probs=38.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHH
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEI   71 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l   71 (269)
                      ++|.|+|.|+ ||.+++++..|.+.|+.-+.++.|+.++.+++.+.+
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~   61 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY   61 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhh
Confidence            5788999988 799999999999999753434799998888877665

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.39  E-value=0.0056  Score=45.29  Aligned_cols=82  Identities=17%  Similarity=0.237  Sum_probs=52.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHH-HHHHHHHHHHHh
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEA-DVESMIKTAVDA  101 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~-~~~~~~~~~~~~  101 (269)
                      --.|.+|+|.|+ |++|...+..+...|+..++.+++++++++. .+++   +.... +  |.++.+ .+.+...+..  
T Consensus        25 ~~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~-a~~l---Ga~~~-i--~~~~~d~~~~~~~~~~~--   94 (174)
T d1p0fa2          25 VTPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPK-AIEL---GATEC-L--NPKDYDKPIYEVICEKT--   94 (174)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHH-HHHT---TCSEE-E--CGGGCSSCHHHHHHHHT--
T ss_pred             CCCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHH-HHHc---CCcEE-E--cCCCchhHHHHHHHHhc--
Confidence            346899999986 8999999999999998766657888877653 3333   43332 2  222211 1222222221  


Q ss_pred             cCCccEEEEccCC
Q 024338          102 WGTVDILINNAGI  114 (269)
Q Consensus       102 ~~~id~li~~ag~  114 (269)
                      -+..|++|.+.|.
T Consensus        95 ~~G~d~vid~~g~  107 (174)
T d1p0fa2          95 NGGVDYAVECAGR  107 (174)
T ss_dssp             TSCBSEEEECSCC
T ss_pred             CCCCcEEEEcCCC
Confidence            1379999999873

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.32  E-value=0.0055  Score=46.27  Aligned_cols=81  Identities=19%  Similarity=0.188  Sum_probs=51.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      .|.+|+|.|+ |++|...+......|+..++.+++++++++. +++   .+... +  .|-.+ +++.+.+.++.+ -..
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~-a~~---~Ga~~-~--~~~~~-~~~~~~i~~~t~-g~g   94 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAH-AKA---QGFEI-A--DLSLD-TPLHEQIAALLG-EPE   94 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHH-HHH---TTCEE-E--ETTSS-SCHHHHHHHHHS-SSC
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHh-hhh---ccccE-E--EeCCC-cCHHHHHHHHhC-CCC
Confidence            6899999986 7999888888878898666656788776643 332   24332 1  22233 233333333322 136


Q ss_pred             ccEEEEccCCC
Q 024338          105 VDILINNAGIT  115 (269)
Q Consensus       105 id~li~~ag~~  115 (269)
                      .|++|.+.|.-
T Consensus        95 ~D~vid~vG~~  105 (195)
T d1kola2          95 VDCAVDAVGFE  105 (195)
T ss_dssp             EEEEEECCCTT
T ss_pred             cEEEEECcccc
Confidence            99999999853

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=96.31  E-value=0.017  Score=41.73  Aligned_cols=119  Identities=15%  Similarity=0.119  Sum_probs=65.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-cEEEEecCCHHHHHHHHHHHHHc----CCcEEEEEccCCCHHHHHHHHHHHH
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGC-KVLVNYARSSKEAEEVCKEIEAS----GGQALTFGGDVSKEADVESMIKTAV   99 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~-~v~i~~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dls~~~~~~~~~~~~~   99 (269)
                      +.+.+.|+|+ |.+|..+|..++..+. ++++ .+.+++.++.....+...    +.......  -++.   ++.+    
T Consensus         6 k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L-~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~--~~~~---~~~~----   74 (154)
T d1pzga1           6 RRKKVAMIGS-GMIGGTMGYLCALRELADVVL-YDVVKGMPEGKALDLSHVTSVVDTNVSVRA--EYSY---EAAL----   74 (154)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEE-ECSSSSHHHHHHHHHHHHHHHTTCCCCEEE--ECSH---HHHH----
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCceEEE-EEeccccchhHHHHHhhhccccCCeeEEec--cCch---hhhh----
Confidence            4577888897 9999999999998884 5554 677766555444444321    11111111  1111   1222    


Q ss_pred             HhcCCccEEEEccCCCCC-C-cccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-CCCCeEEEEcCC
Q 024338          100 DAWGTVDILINNAGITRD-T-LLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMK-KKKGRIINIASV  164 (269)
Q Consensus       100 ~~~~~id~li~~ag~~~~-~-~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~iv~isS~  164 (269)
                         ..-|++|.++|.... + +-...+.   .+.+..|..-    ++.+.+.+.+ .+++.++++|.-
T Consensus        75 ---~~adiVvitag~~~~~g~~~~~~tR---~~l~~~n~~i----v~~i~~~i~~~~p~aiviivsNP  132 (154)
T d1pzga1          75 ---TGADCVIVTAGLTKVPGKPDSEWSR---NDLLPFNSKI----IREIGQNIKKYCPKTFIIVVTNP  132 (154)
T ss_dssp             ---TTCSEEEECCSCSSCTTCCGGGCCG---GGGHHHHHHH----HHHHHHHHHHHCTTCEEEECCSS
T ss_pred             ---cCCCeEEEecccccCCCCCCcccch---hhhhhhhHHH----HHHHHHHHHhcCCCcEEEEeCCc
Confidence               278999999986532 1 1111222   2234445444    4444444433 456777777653

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=96.28  E-value=0.011  Score=42.46  Aligned_cols=75  Identities=13%  Similarity=0.120  Sum_probs=54.5

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCccEE
Q 024338           29 AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDIL  108 (269)
Q Consensus        29 vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l  108 (269)
                      ++|.|. +.+|+.+++.|.++|..++++ ..+++...+..++..  ...+.++.+|.+|++-++++--      .+.|.+
T Consensus         6 iII~G~-g~~g~~l~~~L~~~~~~v~vI-d~d~~~~~~~~~~~~--~~~~~vi~Gd~~d~~~L~~a~i------~~a~~v   75 (153)
T d1id1a_           6 FIVCGH-SILAINTILQLNQRGQNVTVI-SNLPEDDIKQLEQRL--GDNADVIPGDSNDSSVLKKAGI------DRCRAI   75 (153)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEE-ECCCHHHHHHHHHHH--CTTCEEEESCTTSHHHHHHHTT------TTCSEE
T ss_pred             EEEECC-CHHHHHHHHHHHHcCCCEEEE-eccchhHHHHHHHhh--cCCcEEEEccCcchHHHHHhcc------ccCCEE
Confidence            667776 699999999999999998884 667665555555543  3457789999999876554322      367788


Q ss_pred             EEccC
Q 024338          109 INNAG  113 (269)
Q Consensus       109 i~~ag  113 (269)
                      |...+
T Consensus        76 i~~~~   80 (153)
T d1id1a_          76 LALSD   80 (153)
T ss_dssp             EECSS
T ss_pred             EEccc
Confidence            76653

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.24  E-value=0.041  Score=39.16  Aligned_cols=114  Identities=19%  Similarity=0.201  Sum_probs=63.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHc-C--CcEEEEecCCHHHHHHHHHHHHHcCCcEEE-EEccCCCHHHHHHHHHHHHHhcC
Q 024338           28 VAVVTGASRGIGRAVATSLGKA-G--CKVLVNYARSSKEAEEVCKEIEASGGQALT-FGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~-G--~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~-~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      .+.|+|++|.+|.++|..++.+ +  .++++ .+.++ ..+...-.+......... ...+-.+.+    .+.       
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L-~D~~~-~~~g~a~Dl~h~~~~~~~~~~~~~~~~~----~~~-------   68 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSL-YDIAP-VTPGVAVDLSHIPTAVKIKGFSGEDATP----ALE-------   68 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEE-ECSST-THHHHHHHHHTSCSSCEEEEECSSCCHH----HHT-------
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEE-ecccc-cchhHHHHHHCCccccCCcEEEcCCCcc----ccC-------
Confidence            4789999999999999988643 4  55555 45554 333333445443222111 112222322    122       


Q ss_pred             CccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-CCCCeEEEEcCC
Q 024338          104 TVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMK-KKKGRIINIASV  164 (269)
Q Consensus       104 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~iv~isS~  164 (269)
                      .-|++|.++|......   .   +-.+.++.|..-    .+.+.+.+.+ .+++.++++|.-
T Consensus        69 ~aDvvvitaG~~~k~g---~---~R~dl~~~N~~i----~~~v~~~i~~~~p~aivivvtNP  120 (145)
T d2cmda1          69 GADVVLISAGVRRKPG---M---DRSDLFNVNAGI----VKNLVQQVAKTCPKACIGIITNP  120 (145)
T ss_dssp             TCSEEEECCSCCCCTT---C---CGGGGHHHHHHH----HHHHHHHHHHHCTTSEEEECSSS
T ss_pred             CCCEEEECCCccCCCC---c---chhhHHHHHHHH----HHHHHHHHHhhCCCcEEEEccCC
Confidence            6799999999753221   1   223445666554    4444444433 456777777653

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.23  E-value=0.014  Score=42.36  Aligned_cols=76  Identities=16%  Similarity=0.198  Sum_probs=47.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      .|.+++|.|+ |++|...+..+...|++|++ +.+++++++. .++   .+.... +  |.++.+..+.    +.+..++
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~-~~~~~~~~~~-a~~---~Ga~~~-i--~~~~~~~~~~----~~~~~~g   93 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAA-IDIDDAKLEL-ARK---LGASLT-V--NARQEDPVEA----IQRDIGG   93 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEE-EESCHHHHHH-HHH---TTCSEE-E--ETTTSCHHHH----HHHHHSS
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccce-ecchhhHHHh-hhc---cCcccc-c--cccchhHHHH----HHHhhcC
Confidence            5899999886 89999999988889998887 4777766643 333   344332 2  4444333333    2233345


Q ss_pred             ccEEEEccC
Q 024338          105 VDILINNAG  113 (269)
Q Consensus       105 id~li~~ag  113 (269)
                      .|..|.+++
T Consensus        94 ~~~~i~~~~  102 (166)
T d1llua2          94 AHGVLVTAV  102 (166)
T ss_dssp             EEEEEECCS
T ss_pred             Ccccccccc
Confidence            566565554

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=96.13  E-value=0.12  Score=36.43  Aligned_cols=110  Identities=21%  Similarity=0.208  Sum_probs=62.1

Q ss_pred             EEEeCCCCchHHHHHHHHHHcC--CcEEEEecCCHHHHHHHHHHHHHc----CCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           29 AVVTGASRGIGRAVATSLGKAG--CKVLVNYARSSKEAEEVCKEIEAS----GGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        29 vlItGas~giG~~~a~~l~~~G--~~v~i~~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      +.|+|+ |.+|..++..++..|  .++++ .+.+++.++.....+...    ..+..+...  .+.+           .+
T Consensus         3 I~IIGa-G~VG~~la~~l~~~~l~~el~L-~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~~-----------~~   67 (142)
T d1guza1           3 ITVIGA-GNVGATTAFRLAEKQLARELVL-LDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDYA-----------DT   67 (142)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCSEEEE-ECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGG-----------GG
T ss_pred             EEEECc-CHHHHHHHHHHHhCCCCceEEE-eccccccchhhhhhhhcccchhcccceEEec--CCHH-----------Hh
Confidence            677896 899999999999998  34554 687776655443333221    223333322  1111           12


Q ss_pred             CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-CCCCeEEEEcC
Q 024338          103 GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMK-KKKGRIINIAS  163 (269)
Q Consensus       103 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~iv~isS  163 (269)
                      ...|++|.++|......   .+   -.+.++.|..-    .+.+.+.+.+ .+++.++++|-
T Consensus        68 ~dadvvvitag~~~~~g---~~---r~~l~~~N~~i----~~~i~~~i~~~~p~aivivvtN  119 (142)
T d1guza1          68 ANSDIVIITAGLPRKPG---MT---REDLLMKNAGI----VKEVTDNIMKHSKNPIIIVVSN  119 (142)
T ss_dssp             TTCSEEEECCSCCCCTT---CC---HHHHHHHHHHH----HHHHHHHHHHHCSSCEEEECCS
T ss_pred             cCCeEEEEEEecCCCCC---Cc---hHHHHHHHHHH----HHHHHHHhhccCCCeEEEEecC
Confidence            37899999999743221   12   23444555544    4444444432 45666776654

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.11  E-value=0.023  Score=41.16  Aligned_cols=80  Identities=14%  Similarity=0.145  Sum_probs=53.9

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHH---------H-cCCcEEEEEccCCCHHHHHHHHHHH
Q 024338           29 AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIE---------A-SGGQALTFGGDVSKEADVESMIKTA   98 (269)
Q Consensus        29 vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~---------~-~~~~~~~~~~Dls~~~~~~~~~~~~   98 (269)
                      +.|.|+ |.+|.++|+.|.++|++|.+ ++|+++..++..+.-.         . ...++.++..   ..++++++++++
T Consensus         3 I~iIG~-G~mG~~lA~~l~~~g~~V~~-~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIilav---p~~~~~~vl~~l   77 (165)
T d2f1ka2           3 IGVVGL-GLIGASLAGDLRRRGHYLIG-VSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLCT---PIQLILPTLEKL   77 (165)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCEEEE-ECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEECS---CHHHHHHHHHHH
T ss_pred             EEEEee-cHHHHHHHHHHHHCCCEEEE-EECCchHHHHHHHhhccceeeeecccccccccccccC---cHhhhhhhhhhh
Confidence            667766 89999999999999999988 5888877665443210         0 0223333322   367788899988


Q ss_pred             HHhcCCccEEEEccC
Q 024338           99 VDAWGTVDILINNAG  113 (269)
Q Consensus        99 ~~~~~~id~li~~ag  113 (269)
                      .....+=.++++..+
T Consensus        78 ~~~l~~~~iv~~~~s   92 (165)
T d2f1ka2          78 IPHLSPTAIVTDVAS   92 (165)
T ss_dssp             GGGSCTTCEEEECCS
T ss_pred             hhhcccccceeeccc
Confidence            776655556666654

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=96.11  E-value=0.042  Score=38.93  Aligned_cols=111  Identities=14%  Similarity=0.175  Sum_probs=61.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-cEEEEecCCHHHHHHHHHHHHHc----CCcEEEE-EccCCCHHHHHHHHHHHHH
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGC-KVLVNYARSSKEAEEVCKEIEAS----GGQALTF-GGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~-~v~i~~~r~~~~~~~~~~~l~~~----~~~~~~~-~~Dls~~~~~~~~~~~~~~  100 (269)
                      |.+.|+|+ |.+|.++|..++.++. ++++ .+.+++..+.....+...    .....+. ..|..+             
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l-~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~~~-------------   66 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVL-LDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYAD-------------   66 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEE-ECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGG-------------
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEE-EeeccccchhHHHHhhccccccCCCCEEEecCcHHH-------------
Confidence            45667786 9999999999998884 5444 677666554444444221    2222222 122221             


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-CCCCeEEEEcC
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMK-KKKGRIINIAS  163 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~iv~isS  163 (269)
                       ...-|++|.+||.....      ...-.+.+..|..    +.+.+.+.+.+ .+++.++++|-
T Consensus        67 -~~~advvvitag~~~~~------~~~r~dl~~~N~~----i~~~i~~~i~k~~p~aivivvtN  119 (142)
T d1uxja1          67 -TANSDVIVVTSGAPRKP------GMSREDLIKVNAD----ITRACISQAAPLSPNAVIIMVNN  119 (142)
T ss_dssp             -GTTCSEEEECCSCC---------------CHHHHHH----HHHHHHHHHGGGCTTCEEEECSS
T ss_pred             -hcCCCEEEEeeeccCCc------CcchhHHHhHHHH----HHHHHHHHHhccCCCceEEEeCC
Confidence             12679999999965321      1222344555543    46667776654 45666666654

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.03  E-value=0.0086  Score=45.02  Aligned_cols=43  Identities=19%  Similarity=0.231  Sum_probs=36.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHH
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEI   71 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l   71 (269)
                      |.+.|.|+ |-+|..+|..|+.+|+.|++ .+++++.+++..+.+
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l-~D~~~~~l~~a~~~i   47 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVL-VDQTEDILAKSKKGI   47 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEE-ECSCHHHHHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEE-EECChHHHHHHHhhH
Confidence            68999999 78999999999999999998 588888776655544

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=95.99  E-value=0.087  Score=37.57  Aligned_cols=119  Identities=17%  Similarity=0.133  Sum_probs=66.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHc----CCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS----GGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      ..+.|+|+ |.+|..++..++.++..-+++.+++++..+.....+...    ..+..+...|-.             +..
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~~~-------------~~~   69 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY-------------DDL   69 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG-------------GGG
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecccc-------------ccc
Confidence            45777895 899999999888888554556788776665554444321    223333322211             112


Q ss_pred             CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-CCCCeEEEEcCC
Q 024338          103 GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMK-KKKGRIINIASV  164 (269)
Q Consensus       103 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~iv~isS~  164 (269)
                      ..-|++|.++|........... ..-...+..|..-    .+.+.+.+.+ .+++.++++|--
T Consensus        70 ~~advvvitag~~~~~g~~~~~-~~R~~l~~~N~~i----v~~i~~~i~~~~p~aivivvtNP  127 (150)
T d1t2da1          70 AGADVVIVTAGFTKAPGKSDKE-WNRDDLLPLNNKI----MIEIGGHIKKNCPNAFIIVVTNP  127 (150)
T ss_dssp             TTCSEEEECCSCSSCTTCCSTT-CCGGGGHHHHHHH----HHHHHHHHHHHCTTSEEEECSSS
T ss_pred             CCCcEEEEecccccCCCCCccc-cchhHHHHHHHHH----HHHHHHHHHhcCCCeEEEEecCc
Confidence            3789999999965331111000 0112344555443    4555554433 456777777653

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=95.98  E-value=0.0082  Score=44.28  Aligned_cols=42  Identities=24%  Similarity=0.283  Sum_probs=35.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHH
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCK   69 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~   69 (269)
                      +|++.|.|+ |.+|.++|..|+++|++|.+ ..|+++..+++.+
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~-~~r~~~~~~~~~~   42 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLA-WDIDAQRIKEIQD   42 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEE-ECSCHHHHHHHHH
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHH
Confidence            488999999 79999999999999999998 5888877665543

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=95.97  E-value=0.016  Score=42.45  Aligned_cols=81  Identities=17%  Similarity=0.284  Sum_probs=50.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHH-HHHHHHHHHHHhc
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEA-DVESMIKTAVDAW  102 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~-~~~~~~~~~~~~~  102 (269)
                      -.|.+|+|.|+ +++|...+..++..|+..++.+.+++++++. +.++   +.+. ++  |-++.+ ..++.......  
T Consensus        27 k~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~-a~~~---GAd~-~i--n~~~~~~~~~~~~~~~~~--   96 (175)
T d1cdoa2          27 EPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEK-AKVF---GATD-FV--NPNDHSEPISQVLSKMTN--   96 (175)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHH-HHHT---TCCE-EE--CGGGCSSCHHHHHHHHHT--
T ss_pred             CCCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHH-HHHc---CCcE-EE--cCCCcchhHHHHHHhhcc--
Confidence            36799999986 6789899999999998766657887776643 3333   4333 23  222211 12222222222  


Q ss_pred             CCccEEEEccCC
Q 024338          103 GTVDILINNAGI  114 (269)
Q Consensus       103 ~~id~li~~ag~  114 (269)
                      +++|+++.+.|.
T Consensus        97 ~G~d~vid~~G~  108 (175)
T d1cdoa2          97 GGVDFSLECVGN  108 (175)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCcceeeeecCC
Confidence            379999999983

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.94  E-value=0.017  Score=41.65  Aligned_cols=114  Identities=18%  Similarity=0.232  Sum_probs=60.1

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCc------EEEEecCC--HHHHHHHHHHHHHcC-CcEEEEEccCCCHHHHHHHHHHH
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGCK------VLVNYARS--SKEAEEVCKEIEASG-GQALTFGGDVSKEADVESMIKTA   98 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~~------v~i~~~r~--~~~~~~~~~~l~~~~-~~~~~~~~Dls~~~~~~~~~~~~   98 (269)
                      .|.|+||+|.+|.+++..|+..+.-      .+.+...+  .+.++.+..++.... .....+..  ++.  ..+     
T Consensus         5 KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~--~~~-----   75 (154)
T d5mdha1           5 RVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIA--TDK--EEI-----   75 (154)
T ss_dssp             EEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEE--ESC--HHH-----
T ss_pred             EEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhccccccccccccc--Ccc--ccc-----
Confidence            6899999999999999999876521      22223433  344444444444322 22222211  111  111     


Q ss_pred             HHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-C-CCeEEEEc
Q 024338           99 VDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKK-K-KGRIINIA  162 (269)
Q Consensus        99 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~-~~~iv~is  162 (269)
                        .+...|++|..+|.......   +.   ++.++.|..    +.+.+.+.+.+. + .+.++.+|
T Consensus        76 --~~~~~dvVVitag~~~~~g~---sr---~dll~~N~~----i~k~~~~~i~k~a~~~~~iivvs  129 (154)
T d5mdha1          76 --AFKDLDVAILVGSMPRRDGM---ER---KDLLKANVK----IFKCQGAALDKYAKKSVKVIVVG  129 (154)
T ss_dssp             --HTTTCSEEEECCSCCCCTTC---CT---TTTHHHHHH----HHHHHHHHHHHHSCTTCEEEECS
T ss_pred             --ccCCceEEEEecccCCCCCC---ch---hHHHHHhHH----HHHHHHHHHHhhCCCceEEEEec
Confidence              22378999999997543221   11   123444443    355556555442 3 34555555

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.90  E-value=0.021  Score=41.36  Aligned_cols=39  Identities=15%  Similarity=0.239  Sum_probs=32.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHH
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAE   65 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~   65 (269)
                      +|++++|.|+ |++|...+..+...|++|++ +.+++++++
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~-~~~~~~r~~   65 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVA-VDIGDEKLE   65 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEE-ECSCHHHHH
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEec-cCCCHHHhh
Confidence            5889999975 89999998888889999877 477776654

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.82  E-value=0.002  Score=46.53  Aligned_cols=35  Identities=20%  Similarity=0.353  Sum_probs=32.0

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEE
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVN   56 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~   56 (269)
                      ..+++||++||+|| |.+|..-++.|++.|++|.++
T Consensus         8 ~~~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVv   42 (150)
T d1kyqa1           8 AHQLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLV   42 (150)
T ss_dssp             EECCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEE
T ss_pred             heeeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEE
Confidence            46789999999999 569999999999999999985

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.79  E-value=0.0098  Score=43.98  Aligned_cols=49  Identities=35%  Similarity=0.498  Sum_probs=40.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEA   73 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~   73 (269)
                      -+++||.+||.|+. |.+++++..|.+.| ++.+ ..|+.++.+++.+.+..
T Consensus        14 ~~~~~k~vlIlGaG-G~arai~~aL~~~~-~i~I-~nR~~~ka~~l~~~~~~   62 (177)
T d1nvta1          14 GRVKDKNIVIYGAG-GAARAVAFELAKDN-NIII-ANRTVEKAEALAKEIAE   62 (177)
T ss_dssp             CCCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEE-ECSSHHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECCc-HHHHHHHHHHcccc-ceee-ehhhhhHHHHHHHHHHH
Confidence            35899999999874 88999999997776 6666 69999999888887754

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=95.61  E-value=0.042  Score=39.95  Aligned_cols=87  Identities=15%  Similarity=0.148  Sum_probs=61.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      .+...++|.|+. -.|..-++.....|+.|.++ +.+.+.++++.+....   .+   ..-.++.+.+++.+.       
T Consensus        30 v~pa~V~ViGaG-vaG~~A~~~A~~lGA~V~~~-D~~~~~l~~l~~~~~~---~~---~~~~~~~~~l~~~~~-------   94 (168)
T d1pjca1          30 VKPGKVVILGGG-VVGTEAAKMAVGLGAQVQIF-DINVERLSYLETLFGS---RV---ELLYSNSAEIETAVA-------   94 (168)
T ss_dssp             BCCCEEEEECCS-HHHHHHHHHHHHTTCEEEEE-ESCHHHHHHHHHHHGG---GS---EEEECCHHHHHHHHH-------
T ss_pred             CCCcEEEEECCC-hHHHHHHHHHhhCCCEEEEE-eCcHHHHHHHHHhhcc---cc---eeehhhhhhHHHhhc-------
Confidence            456789999986 78999999999999999995 7788888776665532   22   223456666665554       


Q ss_pred             CccEEEEccCCCCCCcccCCCH
Q 024338          104 TVDILINNAGITRDTLLMRMKK  125 (269)
Q Consensus       104 ~id~li~~ag~~~~~~~~~~~~  125 (269)
                      .-|++|.++-+.......-.+.
T Consensus        95 ~aDivI~aalipG~~aP~lIt~  116 (168)
T d1pjca1          95 EADLLIGAVLVPGRRAPILVPA  116 (168)
T ss_dssp             TCSEEEECCCCTTSSCCCCBCH
T ss_pred             cCcEEEEeeecCCcccCeeecH
Confidence            6799999998765543333443

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=95.55  E-value=0.017  Score=43.68  Aligned_cols=43  Identities=19%  Similarity=0.369  Sum_probs=36.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEE   66 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~   66 (269)
                      .+++||+++|-| .|.+|..+|+.|.+.|++|++ .+.+......
T Consensus        23 ~~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv-~d~d~~~~~~   65 (201)
T d1c1da1          23 GSLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLV-ADTDTERVAH   65 (201)
T ss_dssp             CCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEE-ECSCHHHHHH
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEE-ecchHHHHHH
Confidence            479999999997 678999999999999999987 5777765543

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.54  E-value=0.0041  Score=43.63  Aligned_cols=74  Identities=11%  Similarity=0.211  Sum_probs=55.7

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCccE
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDI  107 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~  107 (269)
                      .+.|.|++|..|+.+++.+.++|+.++....++...      .+  ...+   +..|+|.++...+.++.+.+.  ++-+
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~------~~--~~~D---VvIDFS~p~~~~~~l~~~~~~--~~p~   68 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVE------EL--DSPD---VVIDFSSPEALPKTVDLCKKY--RAGL   68 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEE------EC--SCCS---EEEECSCGGGHHHHHHHHHHH--TCEE
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHH------Hh--ccCC---EEEEecCHHHHHHHHHHHHhc--CCCE
Confidence            488999999999999999999999987654443211      00  0122   456999999999999988877  6677


Q ss_pred             EEEccCC
Q 024338          108 LINNAGI  114 (269)
Q Consensus       108 li~~ag~  114 (269)
                      |+-..|.
T Consensus        69 ViGTTG~   75 (128)
T d1vm6a3          69 VLGTTAL   75 (128)
T ss_dssp             EECCCSC
T ss_pred             EEEcCCC
Confidence            8877764

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=95.44  E-value=0.014  Score=39.74  Aligned_cols=72  Identities=14%  Similarity=0.178  Sum_probs=52.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      .....++.|.| +|-||+.++....+.|.+++++..........+         .-.++..|+.|.+.+.++....    
T Consensus         8 ~~~~~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~PA~~v---------a~~~i~~~~~d~~~l~~~~~~~----   73 (111)
T d1kjqa2           8 RPAATRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADAPAMHV---------AHRSHVINMLDGDALRRVVELE----   73 (111)
T ss_dssp             STTCCEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTCGGGGG---------SSEEEECCTTCHHHHHHHHHHH----
T ss_pred             CCCCCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCCchhhc---------CCeEEECCCCCHHHHHHHHHhh----
Confidence            34557799999 459999999999999999998643322222211         1235778999999988887754    


Q ss_pred             CCccEEE
Q 024338          103 GTVDILI  109 (269)
Q Consensus       103 ~~id~li  109 (269)
                       .+|++-
T Consensus        74 -~~DviT   79 (111)
T d1kjqa2          74 -KPHYIV   79 (111)
T ss_dssp             -CCSEEE
T ss_pred             -CCceEE
Confidence             678875

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=95.43  E-value=0.013  Score=43.81  Aligned_cols=43  Identities=23%  Similarity=0.226  Sum_probs=35.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHH
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEI   71 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l   71 (269)
                      |++.|.|+ |-+|..+|..|+.+|++|++ .+++++.+++..+.+
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l-~D~~~~~l~~~~~~i   47 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILM-KDINEHGIEQGLAEA   47 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEE-ECSSHHHHHHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEE-EECCHHHHhhhhhhh
Confidence            56889998 78999999999999999998 588888776655444

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.35  E-value=0.26  Score=34.52  Aligned_cols=110  Identities=16%  Similarity=0.153  Sum_probs=64.0

Q ss_pred             EEEeCCCCchHHHHHHHHHHcC-CcEEEEecCCHHHHHHHHHHHHHc----CCcEEEEE-ccCCCHHHHHHHHHHHHHhc
Q 024338           29 AVVTGASRGIGRAVATSLGKAG-CKVLVNYARSSKEAEEVCKEIEAS----GGQALTFG-GDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        29 vlItGas~giG~~~a~~l~~~G-~~v~i~~~r~~~~~~~~~~~l~~~----~~~~~~~~-~Dls~~~~~~~~~~~~~~~~  102 (269)
                      +.|+|+ |.+|.++|..++.+| +.-+++++.+++..+.....++..    .....+.. .|..+              +
T Consensus         3 I~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~~~--------------~   67 (142)
T d1ojua1           3 LGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSL--------------L   67 (142)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCGGG--------------G
T ss_pred             EEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCHHH--------------h
Confidence            667796 999999999999887 333444688887765544444331    22222332 23221              2


Q ss_pred             CCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-CCCCeEEEEcC
Q 024338          103 GTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMK-KKKGRIINIAS  163 (269)
Q Consensus       103 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~iv~isS  163 (269)
                      ..-|++|..+|.....   ..+   -.+.+..|..-    .+.+.+.+.+ .+++.++++|-
T Consensus        68 ~~adiVvitag~~~~~---g~~---r~~l~~~n~~i----~~~i~~~i~~~~p~aivivvtN  119 (142)
T d1ojua1          68 KGSEIIVVTAGLARKP---GMT---RLDLAHKNAGI----IKDIAKKIVENAPESKILVVTN  119 (142)
T ss_dssp             TTCSEEEECCCCCCCS---SCC---HHHHHHHHHHH----HHHHHHHHHTTSTTCEEEECSS
T ss_pred             ccccEEEEeccccCCC---CCc---hHHHHHHhhHH----HHHHHHHHHhhCCCcEEEEecC
Confidence            3689999999864332   122   23444445443    5555665544 34566666654

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.21  E-value=0.037  Score=39.98  Aligned_cols=83  Identities=17%  Similarity=0.192  Sum_probs=53.6

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHH-------HHcCCcEEEEEccCCCHHHHHHHH---HHH
Q 024338           29 AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEI-------EASGGQALTFGGDVSKEADVESMI---KTA   98 (269)
Q Consensus        29 vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l-------~~~~~~~~~~~~Dls~~~~~~~~~---~~~   98 (269)
                      +-|.|. |-+|..+|+.|+++|++|++ ..|+++..+++.+.-       .+...+..++..-+.+.+++++++   +.+
T Consensus         3 IgiIGl-G~MG~~~A~~L~~~G~~V~~-~d~~~~~~~~~~~~~~~~~~~~~e~~~~~d~ii~~v~~~~~v~~v~~~~~~~   80 (161)
T d1vpda2           3 VGFIGL-GIMGKPMSKNLLKAGYSLVV-SDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGI   80 (161)
T ss_dssp             EEEECC-STTHHHHHHHHHHTTCEEEE-ECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred             EEEEeh-hHHHHHHHHHHHHCCCeEEE-EeCCcchhHHHHHhhhhhcccHHHHHhCCCeEEEEcCCHHHHHHHHhCCcch
Confidence            455654 79999999999999999988 589888777654321       000012234455667778888776   344


Q ss_pred             HHhcCCccEEEEccC
Q 024338           99 VDAWGTVDILINNAG  113 (269)
Q Consensus        99 ~~~~~~id~li~~ag  113 (269)
                      .....+=+++|.+..
T Consensus        81 ~~~~~~g~iiid~sT   95 (161)
T d1vpda2          81 IEGAKPGTVLIDMSS   95 (161)
T ss_dssp             HHHCCTTCEEEECSC
T ss_pred             hhccCCCCEEEECCC
Confidence            544444456666554

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=94.90  E-value=0.06  Score=36.87  Aligned_cols=33  Identities=21%  Similarity=0.270  Sum_probs=28.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEec
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYA   58 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~   58 (269)
                      ++|.++|.||+ .+|.++|..|+++|.+|.++..
T Consensus        29 ~~~~vvIIGgG-~iG~E~A~~l~~~g~~Vtli~~   61 (121)
T d1d7ya2          29 PQSRLLIVGGG-VIGLELAATARTAGVHVSLVET   61 (121)
T ss_dssp             TTCEEEEECCS-HHHHHHHHHHHHTTCEEEEEES
T ss_pred             cCCeEEEECcc-hhHHHHHHHhhcccceEEEEee
Confidence            46889888875 9999999999999999998543

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=94.80  E-value=0.22  Score=35.68  Aligned_cols=83  Identities=12%  Similarity=0.127  Sum_probs=53.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC--cEEEEecCCHHHHHHHHHHHH------------HcCCcEEEEEccCCCHHHHH
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGC--KVLVNYARSSKEAEEVCKEIE------------ASGGQALTFGGDVSKEADVE   92 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~--~v~i~~~r~~~~~~~~~~~l~------------~~~~~~~~~~~Dls~~~~~~   92 (269)
                      |.++|.|+ |-+|.++|+.|.+.|.  +|.. ++++++..+...+.-.            ....++.++   -+-.+++.
T Consensus         2 k~I~IIG~-G~mG~sla~~L~~~g~~~~I~~-~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIil---a~p~~~~~   76 (171)
T d2g5ca2           2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYG-YDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVML---SSPVRTFR   76 (171)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCCSEEEE-ECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEE---CSCHHHHH
T ss_pred             CEEEEEcc-CHHHHHHHHHHHhcCCCeEEEE-EECChHHHHHHHHhhcchhhhhhhhhhhccccccccc---cCCchhhh
Confidence            56889975 8999999999999996  4455 5788776665443210            001112111   12367788


Q ss_pred             HHHHHHHHhcCCccEEEEccCC
Q 024338           93 SMIKTAVDAWGTVDILINNAGI  114 (269)
Q Consensus        93 ~~~~~~~~~~~~id~li~~ag~  114 (269)
                      +.++++.....+=.+++...+.
T Consensus        77 ~vl~~l~~~~~~~~ii~d~~s~   98 (171)
T d2g5ca2          77 EIAKKLSYILSEDATVTDQGSV   98 (171)
T ss_dssp             HHHHHHHHHSCTTCEEEECCSC
T ss_pred             hhhhhhhccccccccccccccc
Confidence            8888888876655566666653

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=94.78  E-value=0.063  Score=41.55  Aligned_cols=82  Identities=15%  Similarity=0.237  Sum_probs=52.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCH-------------------HHHHHHHHHHHHcCCcEEEEEc
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSS-------------------KEAEEVCKEIEASGGQALTFGG   83 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~   83 (269)
                      .+++++|+|.|+ ||+|..+++.|+..|..-+.+++.+.                   .+.+.+.+.+++....+.+...
T Consensus        27 kL~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~~  105 (247)
T d1jw9b_          27 ALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPV  105 (247)
T ss_dssp             HHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhhh
Confidence            578899999995 58999999999999987666545421                   2455566667666554444433


Q ss_pred             cCC-CHHHHHHHHHHHHHhcCCccEEEEcc
Q 024338           84 DVS-KEADVESMIKTAVDAWGTVDILINNA  112 (269)
Q Consensus        84 Dls-~~~~~~~~~~~~~~~~~~id~li~~a  112 (269)
                      +.. +.+.......       ..|++|.+.
T Consensus       106 ~~~~~~~~~~~~~~-------~~divid~~  128 (247)
T d1jw9b_         106 NALLDDAELAALIA-------EHDLVLDCT  128 (247)
T ss_dssp             CSCCCHHHHHHHHH-------TSSEEEECC
T ss_pred             hhhhhhcccccccc-------ccceeeecc
Confidence            322 2233333332       678887654

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.77  E-value=0.088  Score=35.59  Aligned_cols=32  Identities=28%  Similarity=0.300  Sum_probs=27.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecC
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYAR   59 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r   59 (269)
                      |.++|.||+ .+|.++|..|++.|.+|.++..+
T Consensus        23 ~~v~IiGgG-~ig~E~A~~l~~~G~~Vtlve~~   54 (117)
T d1ebda2          23 KSLVVIGGG-YIGIELGTAYANFGTKVTILEGA   54 (117)
T ss_dssp             SEEEEECCS-HHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CeEEEECCC-ccceeeeeeecccccEEEEEEec
Confidence            788999876 99999999999999999986443

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=94.62  E-value=0.025  Score=41.15  Aligned_cols=40  Identities=35%  Similarity=0.401  Sum_probs=35.0

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSS   61 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~   61 (269)
                      ..+++||.++|.|-|.-+|+-++..|.++|+.|.+. .+..
T Consensus        32 ~i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~-h~~t   71 (166)
T d1b0aa1          32 NIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVT-HRFT   71 (166)
T ss_dssp             TCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEE-CSSC
T ss_pred             CcccccceEEEEeccccccHHHHHHHHHhhcccccc-cccc
Confidence            457899999999999999999999999999999884 4433

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=94.45  E-value=0.21  Score=36.22  Aligned_cols=78  Identities=22%  Similarity=0.247  Sum_probs=51.7

Q ss_pred             CCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcC------------------CcEEEEEccCCCHHHHHHHH
Q 024338           34 ASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASG------------------GQALTFGGDVSKEADVESMI   95 (269)
Q Consensus        34 as~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~------------------~~~~~~~~Dls~~~~~~~~~   95 (269)
                      |.|-+|..+++.|+++|++|.+ ..|++++.+++.++-....                  .....+..-+.+...+...+
T Consensus         8 GlG~MG~~ma~~L~~~G~~V~~-~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (178)
T d1pgja2           8 GLGVMGANLALNIAEKGFKVAV-FNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAATDSTI   86 (178)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEE-ECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHHHHHHH
T ss_pred             eehHHHHHHHHHHHHCCCeEEE-EECCHHHHHHHHHcCCccccccchhhhhhhhHHHHhcccceEEEEeecCcchhhhhh
Confidence            5679999999999999999988 6899988887766532110                  01112333344555666666


Q ss_pred             HHHHHhcCCccEEEEcc
Q 024338           96 KTAVDAWGTVDILINNA  112 (269)
Q Consensus        96 ~~~~~~~~~id~li~~a  112 (269)
                      +.+...+.+=++++...
T Consensus        87 ~~~~~~~~~~~iii~~s  103 (178)
T d1pgja2          87 EQLKKVFEKGDILVDTG  103 (178)
T ss_dssp             HHHHHHCCTTCEEEECC
T ss_pred             hhhhhhccccceecccC
Confidence            77766655555666655

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.38  E-value=0.024  Score=41.54  Aligned_cols=40  Identities=20%  Similarity=0.170  Sum_probs=35.3

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSS   61 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~   61 (269)
                      ..+++||.++|.|-|.-+|+-++..|+++|+.|.+. ....
T Consensus        34 ~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~-~~~t   73 (170)
T d1a4ia1          34 GVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTC-HSKT   73 (170)
T ss_dssp             TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEE-CTTC
T ss_pred             CcccccceEEEEecCCccchHHHHHHHhccCceEEE-eccc
Confidence            457899999999999999999999999999999984 4433

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.30  E-value=0.078  Score=38.32  Aligned_cols=50  Identities=22%  Similarity=0.351  Sum_probs=41.0

Q ss_pred             hhhhhhcccccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHH
Q 024338           11 ATIEQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSK   62 (269)
Q Consensus        11 ~~~~~~~~~~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~   62 (269)
                      ++++.+...+...+.||+++|.|-. .+|+.+|+.+...|++|++ +..++-
T Consensus         9 S~~~~~~r~t~~~l~Gk~v~V~GyG-~iG~g~A~~~rg~G~~V~v-~e~dp~   58 (163)
T d1li4a1           9 SLIDGIKRATDVMIAGKVAVVAGYG-DVGKGCAQALRGFGARVII-TEIDPI   58 (163)
T ss_dssp             HHHHHHHHHHCCCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEE-ECSCHH
T ss_pred             hHHHHHHHHhCceecCCEEEEeccc-cccHHHHHHHHhCCCeeEe-eecccc
Confidence            4556666666778999999999865 8999999999999999999 466663

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.21  E-value=0.12  Score=35.48  Aligned_cols=31  Identities=26%  Similarity=0.237  Sum_probs=27.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEec
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYA   58 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~   58 (269)
                      |.++|.||+ .||.++|..|++.|.+|.++..
T Consensus        23 k~vvIvGgG-~iG~E~A~~l~~~G~~Vtlv~~   53 (125)
T d3grsa2          23 GRSVIVGAG-YIAVEMAGILSALGSKTSLMIR   53 (125)
T ss_dssp             SEEEEECCS-HHHHHHHHHHHHTTCEEEEECS
T ss_pred             CEEEEEcCC-ccHHHHHHHHhcCCcEEEEEee
Confidence            789999987 7999999999999999999644

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=94.20  E-value=0.12  Score=37.76  Aligned_cols=77  Identities=16%  Similarity=0.119  Sum_probs=51.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHc-------------CCcEEEEEccCCCHHH
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS-------------GGQALTFGGDVSKEAD   90 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~-------------~~~~~~~~~Dls~~~~   90 (269)
                      .+|++||..|++.|   ..+..|+++|++|+.+ +.++..++...+..++.             +....++.+|..+...
T Consensus        19 ~~~~rvLd~GCG~G---~~a~~la~~G~~V~gv-D~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~   94 (201)
T d1pjza_          19 VPGARVLVPLCGKS---QDMSWLSGQGYHVVGA-ELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTA   94 (201)
T ss_dssp             CTTCEEEETTTCCS---HHHHHHHHHCCEEEEE-EECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTH
T ss_pred             CCCCEEEEecCcCC---HHHHHHHHcCCceEee-cccHHHHHHHHHHhccccchhhhhhhhhccccccceeccccccccc
Confidence            36899999999877   4777999999999984 77887777665555332             2233567777776432


Q ss_pred             HHHHHHHHHHhcCCccEEEEccC
Q 024338           91 VESMIKTAVDAWGTVDILINNAG  113 (269)
Q Consensus        91 ~~~~~~~~~~~~~~id~li~~ag  113 (269)
                      ...         ...|.++....
T Consensus        95 ~~~---------~~~D~i~~~~~  108 (201)
T d1pjza_          95 RDI---------GHCAAFYDRAA  108 (201)
T ss_dssp             HHH---------HSEEEEEEESC
T ss_pred             ccc---------cceeEEEEEee
Confidence            111         26677766544

>d2fr1a2 c.2.1.2 (A:1448-1656) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=94.18  E-value=0.41  Score=35.49  Aligned_cols=146  Identities=12%  Similarity=0.051  Sum_probs=79.0

Q ss_pred             CCCCCCEEEEeCCC--CchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGAS--RGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAV   99 (269)
Q Consensus        22 ~~~~~k~vlItGas--~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~   99 (269)
                      ....+.++++....  ......++..|..+|..+..+.....                        .+.+   .+. +..
T Consensus        21 ~~~~g~~lv~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~------------------------~~~~---~l~-~~~   72 (209)
T d2fr1a2          21 ARLDGTWLVAKYAGTADETSTAAREALESAGARVRELVVDAR------------------------CGRD---ELA-ERL   72 (209)
T ss_dssp             CCCCSEEEEEECTTSSHHHHHHHHHHHHTTSCEEEEEECCTT------------------------CCHH---HHH-HHH
T ss_pred             CCCCCcEEEEeCCCCchHHHHHHHHHHHhCCCeEEEecCCCc------------------------cCHH---HHH-HHh
Confidence            44556655555332  34777888888888888776422111                        1111   222 223


Q ss_pred             HhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHh
Q 024338          100 DAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAA  179 (269)
Q Consensus       100 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  179 (269)
                      ...+.++.|||..+......- ...  ..    ...+...+.++|++..   .....++.+++...... .+....-...
T Consensus        73 ~~~~~~~~vv~l~~~~~~~~~-~~~--~~----~~~~~~~l~l~qal~~---~~~~~~l~~vT~~a~~~-~~~d~~~~p~  141 (209)
T d2fr1a2          73 RSVGEVAGVLSLLAVDEAEPE-EAP--LA----LASLADTLSLVQAMVS---AELGCPLWTVTESAVAT-GPFERVRNAA  141 (209)
T ss_dssp             TTSCCCSEEEECTTTTCCCCS-SCG--GG----CHHHHHHHHHHHHHHH---TTCCCCEEEEEESCSCS-STTSCCSCGG
T ss_pred             hccCCCCeEEEeCCCCCCCCc-chh--HH----HHHHHHHHHHHHHHHh---CCCCCcEEEEEcCCccc-CCCcccCCHh
Confidence            344678999998765432211 111  11    1124445556666543   23345666665533222 1222233457


Q ss_pred             HHHHHHHHHHHHHHhccCCeEEEEEec
Q 024338          180 KAGVIGLTKTVAKEYASRNINVNAIAP  206 (269)
Q Consensus       180 K~al~~~~~~la~e~~~~gi~v~~v~p  206 (269)
                      .+++-+|+++++.|+....++...+.+
T Consensus       142 ~A~l~Gl~r~~~~E~P~l~~~~vDl~~  168 (209)
T d2fr1a2         142 HGALWGVGRVIALENPAVWGGLVDVPA  168 (209)
T ss_dssp             GHHHHHHHHHHHHHCGGGEEEEEEECT
T ss_pred             HHhHHHHHHHHHHhCCCceEEEEECCC
Confidence            889999999999999875556566543

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.16  E-value=0.041  Score=38.60  Aligned_cols=77  Identities=12%  Similarity=0.167  Sum_probs=54.1

Q ss_pred             EEEEeCCCCchHHHHHHHHHHc-CCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCcc
Q 024338           28 VAVVTGASRGIGRAVATSLGKA-GCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVD  106 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~-G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id  106 (269)
                      ++.|.|++|..|+.+++...+. +..+.....+... .    ..+.....+   +..|+|.++...+.++.+.+.  ++-
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~-~----~~~~~~~~D---vvIDFS~p~~~~~~~~~~~~~--~~~   70 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDP-L----SLLTDGNTE---VVIDFTHPDVVMGNLEFLIDN--GIH   70 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCC-T----HHHHTTTCS---EEEECCCTTTHHHHHHHHHHT--TCE
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCc-h----hhhccccCC---EEEEcccHHHHHHHHHHHHhc--CCC
Confidence            4789999999999999988764 5666654444322 1    122222222   567999999999999988876  677


Q ss_pred             EEEEccCC
Q 024338          107 ILINNAGI  114 (269)
Q Consensus       107 ~li~~ag~  114 (269)
                      +|+-..|+
T Consensus        71 ~ViGTTG~   78 (135)
T d1yl7a1          71 AVVGTTGF   78 (135)
T ss_dssp             EEECCCCC
T ss_pred             EEEecccc
Confidence            78866664

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.15  E-value=0.12  Score=38.65  Aligned_cols=77  Identities=25%  Similarity=0.308  Sum_probs=56.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCc-EEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCK-VLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~-v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      .+++|++||=.|+++|.   ++..++.+|+. |+. +..++...+...+.++..+.+..++..|+.+.            
T Consensus        43 ~dl~g~~vLDlg~GtG~---l~i~a~~~g~~~v~~-vdi~~~~~~~a~~N~~~~~~~~~~~~~d~~~~------------  106 (201)
T d1wy7a1          43 GDIEGKVVADLGAGTGV---LSYGALLLGAKEVIC-VEVDKEAVDVLIENLGEFKGKFKVFIGDVSEF------------  106 (201)
T ss_dssp             TSSTTCEEEEETCTTCH---HHHHHHHTTCSEEEE-EESCHHHHHHHHHHTGGGTTSEEEEESCGGGC------------
T ss_pred             CCCCCCEEEECcCcchH---HHHHHHHcCCCEEEE-EcCcHHHHHHHHHHHHHcCCCceEEECchhhh------------
Confidence            57899999999998662   23344567875 555 68888888777777777778888898887542            


Q ss_pred             hcCCccEEEEccCCC
Q 024338          101 AWGTVDILINNAGIT  115 (269)
Q Consensus       101 ~~~~id~li~~ag~~  115 (269)
                       .+++|+||.|+-+.
T Consensus       107 -~~~fD~Vi~nPP~~  120 (201)
T d1wy7a1         107 -NSRVDIVIMNPPFG  120 (201)
T ss_dssp             -CCCCSEEEECCCCS
T ss_pred             -CCcCcEEEEcCccc
Confidence             24899999998653

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.13  E-value=0.11  Score=35.51  Aligned_cols=31  Identities=23%  Similarity=0.247  Sum_probs=27.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEec
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYA   58 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~   58 (269)
                      |.++|.||+ -||.++|..|++.|.+|.++..
T Consensus        24 ~~~vIiG~G-~ig~E~A~~l~~lG~~Vtii~~   54 (122)
T d1v59a2          24 KRLTIIGGG-IIGLEMGSVYSRLGSKVTVVEF   54 (122)
T ss_dssp             SEEEEECCS-HHHHHHHHHHHHTTCEEEEECS
T ss_pred             CeEEEECCC-chHHHHHHHHHhhCcceeEEEe
Confidence            788898875 9999999999999999998543

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.11  E-value=0.24  Score=35.45  Aligned_cols=85  Identities=15%  Similarity=0.121  Sum_probs=52.7

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHH-------HHcCCcEEEEEccCCCHHHHHHHHHH---
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEI-------EASGGQALTFGGDVSKEADVESMIKT---   97 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l-------~~~~~~~~~~~~Dls~~~~~~~~~~~---   97 (269)
                      .|-|.| .|-+|.++|+.|+++|++|.+ ..|+++..+++...-       .+......++..-+.+.+..+.++..   
T Consensus         3 kIg~IG-lG~MG~~iA~~L~~~g~~v~~-~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~~~~~~v~~~~~~   80 (162)
T d3cuma2           3 QIAFIG-LGHMGAPMATNLLKAGYLLNV-FDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDG   80 (162)
T ss_dssp             EEEEEC-CSTTHHHHHHHHHHTTCEEEE-ECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCHHHHHHHHHSTTC
T ss_pred             EEEEEE-EHHHHHHHHHHHHHCCCeEEE-EECchhhhhhhhhhhccccchhhhhccccCeeeecccchhhHHHHHhcccc
Confidence            455664 579999999999999999988 588887766544321       11111223455556777777776654   


Q ss_pred             HHHhcCCccEEEEccCC
Q 024338           98 AVDAWGTVDILINNAGI  114 (269)
Q Consensus        98 ~~~~~~~id~li~~ag~  114 (269)
                      +.....+=+++|.+...
T Consensus        81 ~~~~l~~g~iiid~st~   97 (162)
T d3cuma2          81 LLAHIAPGTLVLECSTI   97 (162)
T ss_dssp             HHHHSCTTCEEEECSCC
T ss_pred             ccccCCCCCEEEECCCC
Confidence            33333333566655543

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.02  E-value=0.14  Score=34.85  Aligned_cols=32  Identities=34%  Similarity=0.294  Sum_probs=27.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCC
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARS   60 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~   60 (269)
                      |.++|.||. -||.++|..|.+.|.+|.++ .|+
T Consensus        21 ~~vvIIGgG-~iG~E~A~~l~~lG~~Vtii-~~~   52 (122)
T d1h6va2          21 GKTLVVGAS-YVALECAGFLAGIGLDVTVM-VRS   52 (122)
T ss_dssp             CSEEEECCS-HHHHHHHHHHHHTTCCEEEE-ESS
T ss_pred             CeEEEECCC-ccHHHHHHHHhhcCCeEEEE-Eec
Confidence            568888875 99999999999999999996 454

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=93.96  E-value=0.16  Score=34.68  Aligned_cols=35  Identities=37%  Similarity=0.357  Sum_probs=29.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEec
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYA   58 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~   58 (269)
                      +.++|.++|.||+ .+|.++|..|++.|.+|.++-.
T Consensus        27 ~~~~k~vvViGgG-~iG~E~A~~l~~~g~~Vtlie~   61 (123)
T d1nhpa2          27 DPEVNNVVVIGSG-YIGIEAAEAFAKAGKKVTVIDI   61 (123)
T ss_dssp             CTTCCEEEEECCS-HHHHHHHHHHHHTTCEEEEEES
T ss_pred             ccCCCEEEEECCh-HHHHHHHHHhhccceEEEEEEe
Confidence            4457889998765 9999999999999999998533

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=93.95  E-value=0.15  Score=34.64  Aligned_cols=34  Identities=26%  Similarity=0.229  Sum_probs=29.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCC
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARS   60 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~   60 (269)
                      .|.++|.||+ -||.++|..|++.|.+|.++..++
T Consensus        22 p~~i~IiG~G-~ig~E~A~~l~~~G~~Vtiv~~~~   55 (119)
T d3lada2          22 PGKLGVIGAG-VIGLELGSVWARLGAEVTVLEAMD   55 (119)
T ss_dssp             CSEEEEECCS-HHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCeEEEECCC-hHHHHHHHHHHHcCCceEEEEeec
Confidence            3779999876 999999999999999999965443

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=93.88  E-value=0.24  Score=35.46  Aligned_cols=82  Identities=22%  Similarity=0.221  Sum_probs=54.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccC---CCHHHHHHHHHHHHHh
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDV---SKEADVESMIKTAVDA  101 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl---s~~~~~~~~~~~~~~~  101 (269)
                      +|+++.|.+.+||.|.-++..+.+.|.++-   .-+++..+++.+.+....  ..--..|+   .+.+...++++.+.+.
T Consensus         2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l~---~l~~~t~~~L~~~lp~~~--~~~NPlD~~~~~~~~~~~~~l~~~~~d   76 (163)
T d2csua3           2 RGNKVAIMTNAGGPGVLTADELDKRGLKLA---TLEEKTIEELRSFLPPMA--AVKNPVDMIASARGEDYYRTAKLLLQD   76 (163)
T ss_dssp             SSSEEEEEESCHHHHHHHHHHHHTTTCEEC---CCCHHHHHHHHHHSCTTC--EESSEEECCTTCCHHHHHHHHHHHHHS
T ss_pred             CCCeEEEEECChHHHHHHHHHHHHcCCccC---CCCHHHHHHHHHhCCCcc--cCCCcccccCCCCHHHHHHHHHHHHcC
Confidence            689999999999999999999999997763   345555555555543221  11123344   3567777777766654


Q ss_pred             cCCccEEEEcc
Q 024338          102 WGTVDILINNA  112 (269)
Q Consensus       102 ~~~id~li~~a  112 (269)
                       +.+|.++...
T Consensus        77 -~~vd~v~v~~   86 (163)
T d2csua3          77 -PNVDMLIAIC   86 (163)
T ss_dssp             -TTCSEEEEEE
T ss_pred             -CCcCEEEEee
Confidence             5688765443

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.83  E-value=0.11  Score=38.82  Aligned_cols=76  Identities=16%  Similarity=0.024  Sum_probs=55.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGT  104 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~  104 (269)
                      ++.+||=.|+++|.   ++..|++.|++++. +..++..++...+.....+..+..+..|..+..          -..+.
T Consensus        37 ~~~~ILDiGcG~G~---~~~~la~~~~~v~g-iD~S~~~i~~ak~~~~~~~~~~~~~~~d~~~l~----------~~~~~  102 (226)
T d1ve3a1          37 KRGKVLDLACGVGG---FSFLLEDYGFEVVG-VDISEDMIRKAREYAKSRESNVEFIVGDARKLS----------FEDKT  102 (226)
T ss_dssp             SCCEEEEETCTTSH---HHHHHHHTTCEEEE-EESCHHHHHHHHHHHHHTTCCCEEEECCTTSCC----------SCTTC
T ss_pred             CCCEEEEECCCcch---hhhhHhhhhccccc-ccccccchhhhhhhhcccccccccccccccccc----------ccCcC
Confidence            45678999999876   66788899999888 477887777666666666667778888877632          01137


Q ss_pred             ccEEEEccCC
Q 024338          105 VDILINNAGI  114 (269)
Q Consensus       105 id~li~~ag~  114 (269)
                      .|+|++...+
T Consensus       103 fD~I~~~~~l  112 (226)
T d1ve3a1         103 FDYVIFIDSI  112 (226)
T ss_dssp             EEEEEEESCG
T ss_pred             ceEEEEecch
Confidence            8998887543

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.83  E-value=0.05  Score=43.42  Aligned_cols=25  Identities=32%  Similarity=0.302  Sum_probs=21.2

Q ss_pred             CCchHHHHHHHHHHcCCcEEEEecC
Q 024338           35 SRGIGRAVATSLGKAGCKVLVNYAR   59 (269)
Q Consensus        35 s~giG~~~a~~l~~~G~~v~i~~~r   59 (269)
                      ||..|.++|+.|..+|+.|+++.+.
T Consensus        45 SGk~G~alA~~~~~~Ga~V~li~g~   69 (290)
T d1p9oa_          45 SGRRGATSAEAFLAAGYGVLFLYRA   69 (290)
T ss_dssp             CCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             chHHHHHHHHHHHHcCCEEEEEecC
Confidence            3578999999999999999986433

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=93.65  E-value=1.3  Score=35.20  Aligned_cols=152  Identities=12%  Similarity=0.021  Sum_probs=83.3

Q ss_pred             CCCEEEEeCCC-CchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcC---CcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           25 EAPVAVVTGAS-RGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASG---GQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        25 ~~k~vlItGas-~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      +|++||=..+. |+++.    ..+..|+.-++.+..++..++...+.++..+   .++.++..|.-      +.++...+
T Consensus       144 ~g~~VLdlf~~~G~~sl----~aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~------~~l~~~~~  213 (317)
T d2b78a2         144 AGKTVLNLFSYTAAFSV----AAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVF------DYFKYARR  213 (317)
T ss_dssp             BTCEEEEETCTTTHHHH----HHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHH------HHHHHHHH
T ss_pred             CCCceeecCCCCcHHHH----HHHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHH------HHHHHHHh
Confidence            58999877775 44443    3455788644446788877776666665543   36788887763      33444444


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCccccCCCCChhhHHhH
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNIGQANYSAAK  180 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  180 (269)
                      ...+.|++|..+-.....+-.....          ......+++.+++.+  +++|.+++.|. .....           
T Consensus       214 ~~~~fD~Ii~DPP~f~~~~~~~~~~----------~~~~~~L~~~a~~ll--~pgG~l~~~sc-s~~~~-----------  269 (317)
T d2b78a2         214 HHLTYDIIIIDPPSFARNKKEVFSV----------SKDYHKLIRQGLEIL--SENGLIIASTN-AANMT-----------  269 (317)
T ss_dssp             TTCCEEEEEECCCCC-----CCCCH----------HHHHHHHHHHHHHTE--EEEEEEEEEEC-CTTSC-----------
T ss_pred             hcCCCCEEEEcChhhccchhHHHHH----------HHHHHHHHHHHHHHc--CCCCEEEEEeC-CccCC-----------
Confidence            4458999999865332211111111          112233556666665  45566665443 22211           


Q ss_pred             HHHHHHHHHHHHHhccCCeEEEEEecCCccCC
Q 024338          181 AGVIGLTKTVAKEYASRNINVNAIAPGFIASD  212 (269)
Q Consensus       181 ~al~~~~~~la~e~~~~gi~v~~v~pG~v~t~  212 (269)
                        .+.|.+.+.......+.++..+..-+.+=|
T Consensus       270 --~~~f~~~v~~a~~~~~~~~~~~~~~~~DfP  299 (317)
T d2b78a2         270 --VSQFKKQIEKGFGKQKHTYLDLQQLPSDFA  299 (317)
T ss_dssp             --HHHHHHHHHHHHTTCCCEEEEEECCCTTSC
T ss_pred             --HHHHHHHHHHHHHHcCCeEEEeccCCCCCC
Confidence              223445555555666777776654334433

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=93.40  E-value=0.1  Score=37.15  Aligned_cols=41  Identities=10%  Similarity=0.246  Sum_probs=33.1

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHH
Q 024338           29 AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEI   71 (269)
Q Consensus        29 vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l   71 (269)
                      +.|. |.|.+|.++++.|.+.|+++++ ..|+.++.+++.++.
T Consensus         3 Ig~I-G~G~mG~al~~~l~~~~~~i~v-~~r~~~~~~~l~~~~   43 (152)
T d2ahra2           3 IGII-GVGKMASAIIKGLKQTPHELII-SGSSLERSKEIAEQL   43 (152)
T ss_dssp             EEEE-CCSHHHHHHHHHHTTSSCEEEE-ECSSHHHHHHHHHHH
T ss_pred             EEEE-eccHHHHHHHHHHHhCCCeEEE-EcChHHhHHhhcccc
Confidence            4455 5679999999999999999888 588888887776655

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=93.35  E-value=0.2  Score=33.79  Aligned_cols=32  Identities=9%  Similarity=0.110  Sum_probs=27.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEec
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYA   58 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~   58 (269)
                      .|.++|.||. .+|.++|..|++.|.+|.++..
T Consensus        22 p~~v~IiGgG-~iG~E~A~~l~~~g~~Vtlv~~   53 (117)
T d1onfa2          22 SKKIGIVGSG-YIAVELINVIKRLGIDSYIFAR   53 (117)
T ss_dssp             CSEEEEECCS-HHHHHHHHHHHTTTCEEEEECS
T ss_pred             CCEEEEECCc-hHHHHHHHHHHhccccceeeeh
Confidence            4788888875 9999999999999999999643

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=93.31  E-value=0.2  Score=33.70  Aligned_cols=31  Identities=23%  Similarity=0.216  Sum_probs=26.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEec
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYA   58 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~   58 (269)
                      |.++|.||. .+|.++|..|++.|.+|.++..
T Consensus        22 ~~vvIiGgG-~ig~E~A~~l~~~G~~Vtlve~   52 (116)
T d1gesa2          22 ERVAVVGAG-YIGVELGGVINGLGAKTHLFEM   52 (116)
T ss_dssp             SEEEEECCS-HHHHHHHHHHHHTTCEEEEECS
T ss_pred             CEEEEECCC-hhhHHHHHHhhccccEEEEEee
Confidence            678888775 9999999999999999988533

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=93.30  E-value=0.15  Score=36.21  Aligned_cols=47  Identities=19%  Similarity=0.143  Sum_probs=32.2

Q ss_pred             hhhhhhhcccccCCCCCCEEEEe-CCCCchHHHHHHHHHHcCCcEEEEec
Q 024338           10 VATIEQATNEAAQNVEAPVAVVT-GASRGIGRAVATSLGKAGCKVLVNYA   58 (269)
Q Consensus        10 ~~~~~~~~~~~~~~~~~k~vlIt-Gas~giG~~~a~~l~~~G~~v~i~~~   58 (269)
                      .+|++++ . ......++.++|. .+++.||.++|..|+++|++|.++..
T Consensus        25 v~t~~d~-l-~~~~~~~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~   72 (156)
T d1djqa2          25 QLTPEQV-M-DGKKKIGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSG   72 (156)
T ss_dssp             EECHHHH-H-HTCSCCCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEES
T ss_pred             EECHHHH-h-cCccccCCceEEEecCCChHHHHHHHHHHHcCCeEEEEec
Confidence            3455554 1 1233345555555 46689999999999999999999643

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.13  E-value=0.066  Score=39.10  Aligned_cols=35  Identities=23%  Similarity=0.310  Sum_probs=32.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEE
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVN   56 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~   56 (269)
                      .+++||.++|.|-|.-+|+-++..|+++|+.|...
T Consensus        25 ~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~   59 (171)
T d1edza1          25 NRLYGKKCIVINRSEIVGRPLAALLANDGATVYSV   59 (171)
T ss_dssp             CTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEE
T ss_pred             CCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEe
Confidence            48999999999999999999999999999998873

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=93.11  E-value=0.3  Score=32.82  Aligned_cols=35  Identities=14%  Similarity=0.141  Sum_probs=29.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEec
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYA   58 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~   58 (269)
                      ..++|.++|.||+ -+|.++|..|++.|.++.++..
T Consensus        19 ~~~~~~vvVvGgG-~ig~E~A~~l~~~g~~vt~i~~   53 (121)
T d1mo9a2          19 YEPGSTVVVVGGS-KTAVEYGCFFNATGRRTVMLVR   53 (121)
T ss_dssp             SCCCSEEEEECCS-HHHHHHHHHHHHTTCEEEEECS
T ss_pred             hCCCCEEEEECCC-HHHHHHHHHHHhcchhheEeec
Confidence            3457899988875 9999999999999999998543

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=93.07  E-value=0.072  Score=36.73  Aligned_cols=70  Identities=21%  Similarity=0.206  Sum_probs=46.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCcc
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVD  106 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id  106 (269)
                      |-++|.|. |.+|+.+++.|.  |.++++ +..+++..+.+..      ..+.++.+|.++++.++++-      ..+.+
T Consensus         1 kHivI~G~-g~~g~~l~~~L~--~~~i~v-i~~d~~~~~~~~~------~~~~~i~Gd~~~~~~L~~a~------i~~A~   64 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLRELR--GSEVFV-LAEDENVRKKVLR------SGANFVHGDPTRVSDLEKAN------VRGAR   64 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTSC--GGGEEE-EESCTTHHHHHHH------TTCEEEESCTTSHHHHHHTT------CTTCS
T ss_pred             CEEEEECC-CHHHHHHHHHHc--CCCCEE-EEcchHHHHHHHh------cCccccccccCCHHHHHHhh------hhcCc
Confidence            34677775 689999999994  556666 3566665544322      25677889999987665532      23567


Q ss_pred             EEEEcc
Q 024338          107 ILINNA  112 (269)
Q Consensus       107 ~li~~a  112 (269)
                      .+|.+.
T Consensus        65 ~vi~~~   70 (129)
T d2fy8a1          65 AVIVNL   70 (129)
T ss_dssp             EEEECC
T ss_pred             EEEEec
Confidence            777544

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=92.98  E-value=0.98  Score=31.81  Aligned_cols=45  Identities=16%  Similarity=0.252  Sum_probs=33.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcC--CcEEE-EecCCHHHHHHHHHHH
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAG--CKVLV-NYARSSKEAEEVCKEI   71 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G--~~v~i-~~~r~~~~~~~~~~~l   71 (269)
                      |++.|.|+||.||.....-+.++-  ++|.. .+.++.+.+.+...+.
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f   49 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEF   49 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHH
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHH
Confidence            679999999999999999988873  56554 3455666665555554

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=92.87  E-value=0.22  Score=36.93  Aligned_cols=37  Identities=24%  Similarity=0.288  Sum_probs=32.1

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecC
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYAR   59 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r   59 (269)
                      ..++.||++.|.|. |.||+.+|+.+...|++|+.. .+
T Consensus        44 ~~eL~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~-d~   80 (193)
T d1mx3a1          44 AARIRGETLGIIGL-GRVGQAVALRAKAFGFNVLFY-DP   80 (193)
T ss_dssp             CCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEE-CT
T ss_pred             ceeeeCceEEEecc-ccccccceeeeeccccceeec-cC
Confidence            46789999999976 599999999999999999884 44

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.84  E-value=0.25  Score=39.34  Aligned_cols=86  Identities=16%  Similarity=0.179  Sum_probs=54.2

Q ss_pred             hhhhcccccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHc--CCcEEEEEccCCCHHH
Q 024338           13 IEQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS--GGQALTFGGDVSKEAD   90 (269)
Q Consensus        13 ~~~~~~~~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dls~~~~   90 (269)
                      ...+-......++||+||-.|++.|+   ++..++++|++.++.+..++.. ....+.....  ..++.++..|+.+...
T Consensus        23 y~~ai~~~~~~~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~-~~a~~~~~~~~~~~~i~~~~~~~~~l~~   98 (311)
T d2fyta1          23 YRDFIYQNPHIFKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEIL-YQAMDIIRLNKLEDTITLIKGKIEEVHL   98 (311)
T ss_dssp             HHHHHHHCGGGTTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHH-HHHHHHHHHTTCTTTEEEEESCTTTSCC
T ss_pred             HHHHHHhccccCCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHH-HHHHHHHHHhCCCccceEEEeeHHHhcC
Confidence            33443333455789999999999876   5667788897644434555543 3333333333  4578999998876431


Q ss_pred             HHHHHHHHHHhcCCccEEEEcc
Q 024338           91 VESMIKTAVDAWGTVDILINNA  112 (269)
Q Consensus        91 ~~~~~~~~~~~~~~id~li~~a  112 (269)
                                ...++|+++...
T Consensus        99 ----------~~~~~D~Ivse~  110 (311)
T d2fyta1          99 ----------PVEKVDVIISEW  110 (311)
T ss_dssp             ----------SCSCEEEEEECC
T ss_pred             ----------ccccceEEEEee
Confidence                      113789998754

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=92.78  E-value=0.27  Score=33.97  Aligned_cols=33  Identities=30%  Similarity=0.207  Sum_probs=28.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEec
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYA   58 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~   58 (269)
                      ++|.++|.||+ .+|.++|..|++.|.+|.++..
T Consensus        34 ~~k~v~VIGgG-~iG~E~A~~l~~~g~~Vtvie~   66 (133)
T d1q1ra2          34 ADNRLVVIGGG-YIGLEVAATAIKANMHVTLLDT   66 (133)
T ss_dssp             TTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECS
T ss_pred             cCCEEEEECCc-hHHHHHHHHHHhhCcceeeeee
Confidence            46889999875 9999999999999999998533

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=92.78  E-value=0.34  Score=35.96  Aligned_cols=37  Identities=24%  Similarity=0.303  Sum_probs=32.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCC
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARS   60 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~   60 (269)
                      .+++||++.|.|-+ .||+.+|+.+...|++|+.. ++.
T Consensus        39 ~el~gk~vgIiG~G-~IG~~va~~l~~fg~~V~~~-d~~   75 (197)
T d1j4aa1          39 REVRDQVVGVVGTG-HIGQVFMQIMEGFGAKVITY-DIF   75 (197)
T ss_dssp             CCGGGSEEEEECCS-HHHHHHHHHHHHTTCEEEEE-CSS
T ss_pred             ccccCCeEEEeccc-ccchhHHHhHhhhccccccc-Ccc
Confidence            56899999999865 99999999999999999884 443

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=92.77  E-value=0.47  Score=37.98  Aligned_cols=118  Identities=9%  Similarity=0.040  Sum_probs=70.4

Q ss_pred             CCCCCEEEEeCCCCc-hHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCC-cEEEEEccCCCHHHHHHHHHHHHH
Q 024338           23 NVEAPVAVVTGASRG-IGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGG-QALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        23 ~~~~k~vlItGas~g-iG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      ..+|++||=.++..| ++.+    ++..|.+|+. +..++..++...+.++..+. ++.++..|..+.      .+.+..
T Consensus       143 ~~~g~rVLDl~~gtG~~s~~----~a~g~~~V~~-vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~~~------~~~~~~  211 (318)
T d1wxxa2         143 RFRGERALDVFSYAGGFALH----LALGFREVVA-VDSSAEALRRAEENARLNGLGNVRVLEANAFDL------LRRLEK  211 (318)
T ss_dssp             GCCEEEEEEETCTTTHHHHH----HHHHEEEEEE-EESCHHHHHHHHHHHHHTTCTTEEEEESCHHHH------HHHHHH
T ss_pred             HhCCCeeeccCCCCcHHHHH----HHhcCCcEEe-ecchHHHHHHHHHHHHHcCCCCcceeeccHHHH------hhhhHh
Confidence            357899998888654 4433    4445667766 68888888887777777653 588888876542      233333


Q ss_pred             hcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcC
Q 024338          101 AWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIAS  163 (269)
Q Consensus       101 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS  163 (269)
                      ...+.|.||.++.......   ..   ....    ......+++.+++.+  +++|.+++.|.
T Consensus       212 ~~~~fD~Vi~DpP~~~~~~---~~---~~~~----~~~~~~l~~~a~~lL--kpGG~Lv~~sc  262 (318)
T d1wxxa2         212 EGERFDLVVLDPPAFAKGK---KD---VERA----YRAYKEVNLRAIKLL--KEGGILATASC  262 (318)
T ss_dssp             TTCCEEEEEECCCCSCCST---TS---HHHH----HHHHHHHHHHHHHTE--EEEEEEEEEEC
T ss_pred             hhcCCCEEEEcCCccccch---HH---HHHH----HHHHHHHHHHHHHHc--CCCCEEEEEeC
Confidence            3457999999875433221   11   1111    111223455555555  56677776544

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=92.72  E-value=0.35  Score=35.36  Aligned_cols=86  Identities=17%  Similarity=0.151  Sum_probs=51.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHH---------------
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEA---------------   89 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~---------------   89 (269)
                      +.-.|+|.||. -.|..-++-....|+.|.++ +.+.+.++++.+    .+.+.  +..+..+.+               
T Consensus        28 ~pa~VvViGaG-vaG~~Aa~~A~~lGA~V~v~-D~~~~~~~~l~~----l~~~~--i~~~~~~~~~~~~~~gyA~~~s~~   99 (183)
T d1l7da1          28 PPARVLVFGVG-VAGLQAIATAKRLGAVVMAT-DVRAATKEQVES----LGGKF--ITVDDEAMKTAETAGGYAKEMGEE   99 (183)
T ss_dssp             CCCEEEEECCS-HHHHHHHHHHHHTTCEEEEE-CSCSTTHHHHHH----TTCEE--CCC---------------------
T ss_pred             CCcEEEEEcCc-HHHHHHHHHHHHcCCEEEEE-eccHHHHHHHHH----hhcce--EEEeccccccccccccchhhcCHH
Confidence            44578899875 78999999999999999995 666655554443    22221  222211111               


Q ss_pred             HHHHHHHHHHHhcCCccEEEEccCCCCCC
Q 024338           90 DVESMIKTAVDAWGTVDILINNAGITRDT  118 (269)
Q Consensus        90 ~~~~~~~~~~~~~~~id~li~~ag~~~~~  118 (269)
                      ..++--+.+.+....-|++|..+-+....
T Consensus       100 ~~~~~~~~l~~~l~~aDlVI~talipG~~  128 (183)
T d1l7da1         100 FRKKQAEAVLKELVKTDIAITTALIPGKP  128 (183)
T ss_dssp             --CCHHHHHHHHHTTCSEEEECCCCTTSC
T ss_pred             HHHHHHHHHHHHHHhhhhheeeeecCCcc
Confidence            11122333444456899999999776543

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=92.70  E-value=0.22  Score=33.88  Aligned_cols=32  Identities=31%  Similarity=0.376  Sum_probs=27.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCC
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARS   60 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~   60 (269)
                      |.++|.||. -||.++|..|.+.|.+|.++ .|+
T Consensus        26 ~~~viiG~G-~iglE~A~~~~~~G~~Vtvi-~~~   57 (123)
T d1dxla2          26 KKLVVIGAG-YIGLEMGSVWGRIGSEVTVV-EFA   57 (123)
T ss_dssp             SEEEESCCS-HHHHHHHHHHHHHTCEEEEE-CSS
T ss_pred             CeEEEEccc-hHHHHHHHHHHhcCCeEEEE-EEc
Confidence            788888875 99999999999999999995 443

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=92.67  E-value=0.27  Score=32.89  Aligned_cols=29  Identities=31%  Similarity=0.348  Sum_probs=25.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEE
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVN   56 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~   56 (269)
                      |.++|.||+ .+|.++|..|++.|.+|.++
T Consensus        22 ~~vvIiGgG-~~G~E~A~~l~~~g~~Vtlv   50 (115)
T d1lvla2          22 QHLVVVGGG-YIGLELGIAYRKLGAQVSVV   50 (115)
T ss_dssp             SEEEEECCS-HHHHHHHHHHHHHTCEEEEE
T ss_pred             CeEEEECCC-HHHHHHHHHHhhcccceEEE
Confidence            778888765 99999999999999999885

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=92.66  E-value=0.11  Score=38.74  Aligned_cols=73  Identities=21%  Similarity=0.235  Sum_probs=50.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      -+++||+||=.|+++|+   ++..++..|+.-+..+..+++..+...+    ...++.++.+|+.+.             
T Consensus        45 ~dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~----N~~~~~~~~~D~~~l-------------  104 (197)
T d1ne2a_          45 GNIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKR----NCGGVNFMVADVSEI-------------  104 (197)
T ss_dssp             TSSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHH----HCTTSEEEECCGGGC-------------
T ss_pred             CCCCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHH----ccccccEEEEehhhc-------------
Confidence            57899999999998873   3345677886634436777765543332    345678888998642             


Q ss_pred             cCCccEEEEccCC
Q 024338          102 WGTVDILINNAGI  114 (269)
Q Consensus       102 ~~~id~li~~ag~  114 (269)
                      -+++|+||.|.-+
T Consensus       105 ~~~fD~Vi~NPPf  117 (197)
T d1ne2a_         105 SGKYDTWIMNPPF  117 (197)
T ss_dssp             CCCEEEEEECCCC
T ss_pred             CCcceEEEeCccc
Confidence            1589999999764

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=92.55  E-value=0.75  Score=36.78  Aligned_cols=117  Identities=12%  Similarity=0.120  Sum_probs=69.7

Q ss_pred             CCCEEEEeCCC-CchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcC--CcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           25 EAPVAVVTGAS-RGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASG--GQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        25 ~~k~vlItGas-~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      +|++||=.++. |+++.+    ++..|+.-++.+..+++.++...+.++..+  .++.++..|+.      +.+..+...
T Consensus       145 ~g~~VLDl~~g~G~~si~----~a~~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~------~~~~~~~~~  214 (324)
T d2as0a2         145 PGDRVLDVFTYTGGFAIH----AAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAF------EEMEKLQKK  214 (324)
T ss_dssp             TTCEEEETTCTTTHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHH------HHHHHHHHT
T ss_pred             CCCeeecccCcccchhhh----hhhcCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhh------hhhHHHHhc
Confidence            47899988886 444443    446787544446888888877777776664  36777777754      233344444


Q ss_pred             cCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcC
Q 024338          102 WGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIAS  163 (269)
Q Consensus       102 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS  163 (269)
                      ..++|.||.++-......      ......    ......+++.+++.+  +++|.+++.|.
T Consensus       215 ~~~fD~Vi~DpP~~~~~~------~~~~~~----~~~y~~l~~~a~~ll--~pGG~lv~~s~  264 (324)
T d2as0a2         215 GEKFDIVVLDPPAFVQHE------KDLKAG----LRAYFNVNFAGLNLV--KDGGILVTCSC  264 (324)
T ss_dssp             TCCEEEEEECCCCSCSSG------GGHHHH----HHHHHHHHHHHHTTE--EEEEEEEEEEC
T ss_pred             cCCCCchhcCCccccCCH------HHHHHH----HHHHHHHHHHHHHHc--CCCcEEEEEeC
Confidence            458999999876433221      122222    112233555555655  56677776654

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=92.48  E-value=0.99  Score=31.27  Aligned_cols=86  Identities=12%  Similarity=0.018  Sum_probs=50.7

Q ss_pred             CCCEEEEeCCC---CchHHHHHHHHHHcCCcEEEEecCCHHHHH--HHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHH
Q 024338           25 EAPVAVVTGAS---RGIGRAVATSLGKAGCKVLVNYARSSKEAE--EVCKEIEASGGQALTFGGDVSKEADVESMIKTAV   99 (269)
Q Consensus        25 ~~k~vlItGas---~giG~~~a~~l~~~G~~v~i~~~r~~~~~~--~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~   99 (269)
                      +.|++.|.|+|   +..|..+.+.|.++|++++.+ ........  .....+.+....+..+. =+...+.+.++++++.
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pV-nP~~~~i~G~~~~~sl~dlp~~iD~v~-i~vp~~~~~~~~~e~~   95 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPV-NPKYEEVLGRKCYPSVLDIPDKIEVVD-LFVKPKLTMEYVEQAI   95 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEE-CTTCSEETTEECBSSGGGCSSCCSEEE-ECSCHHHHHHHHHHHH
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEE-CCcccccCCCcccccccccCccceEEE-EEeCHHHHHHHHHHHH
Confidence            46899999999   589999999999999997763 32211000  00111111111111111 1134667777777777


Q ss_pred             HhcCCccEEEEccCC
Q 024338          100 DAWGTVDILINNAGI  114 (269)
Q Consensus       100 ~~~~~id~li~~ag~  114 (269)
                      +.  ++..++...|.
T Consensus        96 ~~--g~k~v~~~~G~  108 (139)
T d2d59a1          96 KK--GAKVVWFQYNT  108 (139)
T ss_dssp             HH--TCSEEEECTTC
T ss_pred             Hh--CCCEEEEeccc
Confidence            65  46677766664

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=92.33  E-value=0.2  Score=38.33  Aligned_cols=49  Identities=18%  Similarity=0.302  Sum_probs=39.6

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEI   71 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l   71 (269)
                      ..+++||+++|-|- |.+|..+|+.|.+.|+++++ .+.+......+..+.
T Consensus        34 ~~~l~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~-~d~~~~~~~~~~~~~   82 (230)
T d1leha1          34 SDSLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVV-TDVNKAAVSAAVAEE   82 (230)
T ss_dssp             SCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEE-ECSCHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEe-ecccHHHHHHHHHhc
Confidence            45689999999875 58999999999999999988 577777666655543

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.23  E-value=0.042  Score=46.41  Aligned_cols=31  Identities=26%  Similarity=0.485  Sum_probs=26.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCc-EEE
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCK-VLV   55 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~-v~i   55 (269)
                      +++..|||.|+ ||||.++++.|+..|.. +.+
T Consensus        35 l~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~l   66 (426)
T d1yovb1          35 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHV   66 (426)
T ss_dssp             HHHCCEEEECS-STTHHHHHHHHHTTTCCCEEE
T ss_pred             HhcCeEEEECC-CHHHHHHHHHHHHcCCCeEEE
Confidence            56778999999 58999999999999975 444

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=92.16  E-value=0.2  Score=34.01  Aligned_cols=30  Identities=30%  Similarity=0.395  Sum_probs=26.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEE
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVN   56 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~   56 (269)
                      +|.++|.||. .+|.++|..|+++|.+|.++
T Consensus        32 ~~~vvIiGgG-~iG~E~A~~l~~~g~~Vtlv   61 (122)
T d1xhca2          32 SGEAIIIGGG-FIGLELAGNLAEAGYHVKLI   61 (122)
T ss_dssp             HSEEEEEECS-HHHHHHHHHHHHTTCEEEEE
T ss_pred             CCcEEEECCc-HHHHHHHHHhhcccceEEEE
Confidence            4788888875 99999999999999999985

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=92.05  E-value=0.18  Score=35.61  Aligned_cols=41  Identities=27%  Similarity=0.414  Sum_probs=32.6

Q ss_pred             EEEeCCCCchHHHHHHHHHHcC-CcEEEEecCCHHHHHHHHHHH
Q 024338           29 AVVTGASRGIGRAVATSLGKAG-CKVLVNYARSSKEAEEVCKEI   71 (269)
Q Consensus        29 vlItGas~giG~~~a~~l~~~G-~~v~i~~~r~~~~~~~~~~~l   71 (269)
                      +.+.|+ |.+|.++++.|.+.| .++.+ ..|+++..+++.++.
T Consensus         3 I~fIG~-G~MG~ai~~~l~~~~~~~i~v-~~r~~~~~~~l~~~~   44 (152)
T d1yqga2           3 VYFLGG-GNMAAAVAGGLVKQGGYRIYI-ANRGAEKRERLEKEL   44 (152)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHCSCEEEE-ECSSHHHHHHHHHHT
T ss_pred             EEEEcC-cHHHHHHHHHHHHCCCCcEEE-EeCChhHHHHhhhhc
Confidence            567776 899999999999888 66665 699988887776643

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=91.82  E-value=2.3  Score=33.66  Aligned_cols=95  Identities=16%  Similarity=0.063  Sum_probs=58.2

Q ss_pred             hhhhhhhhcccccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcC---CcEEEEEccC
Q 024338            9 QVATIEQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASG---GQALTFGGDV   85 (269)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dl   85 (269)
                      |+.+.......-...-++++||=..+.+| |  +...++..|++|+. +..++..++...+.+...+   .++.++..|+
T Consensus       116 qr~nr~~~~~~~~~~~~~~rVLdlf~~tG-~--~sl~aa~~GA~V~~-VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~  191 (309)
T d2igta1         116 QIVHWEWLKNAVETADRPLKVLNLFGYTG-V--ASLVAAAAGAEVTH-VDASKKAIGWAKENQVLAGLEQAPIRWICEDA  191 (309)
T ss_dssp             GHHHHHHHHHHHHHSSSCCEEEEETCTTC-H--HHHHHHHTTCEEEE-ECSCHHHHHHHHHHHHHHTCTTSCEEEECSCH
T ss_pred             hhHHHHHHHHHHhhccCCCeEEEecCCCc-H--HHHHHHhCCCeEEE-EeChHHHHHHHHHhhhhhcccCCcEEEEeCCH
Confidence            44444433222222335788888877655 1  22345668998766 6888887776666655432   3578887665


Q ss_pred             CCHHHHHHHHHHHHHhcCCccEEEEccC
Q 024338           86 SKEADVESMIKTAVDAWGTVDILINNAG  113 (269)
Q Consensus        86 s~~~~~~~~~~~~~~~~~~id~li~~ag  113 (269)
                      .      +.+++....-.+.|+||...-
T Consensus       192 ~------~~l~~~~~~~~~fD~IilDPP  213 (309)
T d2igta1         192 M------KFIQREERRGSTYDIILTDPP  213 (309)
T ss_dssp             H------HHHHHHHHHTCCBSEEEECCC
T ss_pred             H------HhHHHHhhcCCCCCEEEECCC
Confidence            4      445555555468999998864

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=91.65  E-value=0.097  Score=37.38  Aligned_cols=33  Identities=27%  Similarity=0.269  Sum_probs=28.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHH
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSK   62 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~   62 (269)
                      .++|.|+ |.+|..++..|++.|++|.++ .|+++
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~-~r~~~   34 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHEVQGW-LRVPQ   34 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEE-CSSCC
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCceEEE-EcCHH
Confidence            4789998 899999999999999999985 66553

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=91.17  E-value=0.16  Score=37.38  Aligned_cols=39  Identities=21%  Similarity=0.224  Sum_probs=32.6

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSS   61 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~   61 (269)
                      ..++.+|++.|.|. |.||+++++.+...|++|+.. ++..
T Consensus        39 ~~~l~~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~-d~~~   77 (184)
T d1ygya1          39 GTEIFGKTVGVVGL-GRIGQLVAQRIAAFGAYVVAY-DPYV   77 (184)
T ss_dssp             BCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEE-CTTS
T ss_pred             cccccceeeeeccc-cchhHHHHHHhhhccceEEee-cCCC
Confidence            45689999999985 699999999999999999884 5443

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=91.06  E-value=0.3  Score=33.32  Aligned_cols=32  Identities=19%  Similarity=0.204  Sum_probs=27.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEec
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYA   58 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~   58 (269)
                      .|.++|.||+ -||.++|..|.+.|.+|.++-.
T Consensus        26 p~~vvIiGgG-~IG~E~A~~~~~~G~~Vtive~   57 (125)
T d1ojta2          26 PGKLLIIGGG-IIGLEMGTVYSTLGSRLDVVEM   57 (125)
T ss_dssp             CSEEEEESCS-HHHHHHHHHHHHHTCEEEEECS
T ss_pred             CCeEEEECCC-HHHHHHHHHhhcCCCEEEEEEe
Confidence            4788999875 9999999999999999998533

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=90.58  E-value=0.18  Score=39.20  Aligned_cols=37  Identities=14%  Similarity=0.220  Sum_probs=32.4

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEec
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYA   58 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~   58 (269)
                      ..+++||+++|-| .|.+|..+++.|.+.|++++.+..
T Consensus        31 ~~~l~g~~v~IQG-fGnVG~~~a~~L~e~GakvvavsD   67 (255)
T d1bgva1          31 NDTLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLSG   67 (255)
T ss_dssp             TCCSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEEE
T ss_pred             CCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEec
Confidence            3578999999998 689999999999999999887543

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.44  E-value=1  Score=33.69  Aligned_cols=44  Identities=11%  Similarity=0.006  Sum_probs=34.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHH
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEI   71 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l   71 (269)
                      ..+++||..|+..|   ..+..|+++|++|+. +.-++...+...++.
T Consensus        44 ~~~~rvLd~GCG~G---~~a~~LA~~G~~V~g-vD~S~~ai~~a~~~~   87 (229)
T d2bzga1          44 KSGLRVFFPLCGKA---VEMKWFADRGHSVVG-VEISELGIQEFFTEQ   87 (229)
T ss_dssp             CCSCEEEETTCTTC---THHHHHHHTTCEEEE-ECSCHHHHHHHHHHT
T ss_pred             CCCCEEEEeCCCCc---HHHHHHHhCCCcEEE-EeCCHHHHHHHHHHh
Confidence            36789999999887   458888999999988 477777776655543

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.38  E-value=2.4  Score=30.98  Aligned_cols=37  Identities=19%  Similarity=0.186  Sum_probs=29.8

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHH
Q 024338           29 AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEV   67 (269)
Q Consensus        29 vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~   67 (269)
                      +.|. |.|.+|..+|..|+++|++|+. .+.+++..+.+
T Consensus         3 I~Vi-GlG~vGl~~a~~la~~g~~V~g-~D~n~~~i~~l   39 (202)
T d1mv8a2           3 ISIF-GLGYVGAVCAGCLSARGHEVIG-VDVSSTKIDLI   39 (202)
T ss_dssp             EEEE-CCSTTHHHHHHHHHHTTCEEEE-ECSCHHHHHHH
T ss_pred             EEEE-CCCHhHHHHHHHHHhCCCcEEE-EeCCHHHHHHh
Confidence            5566 5679999999999999999988 57887665544

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=90.26  E-value=0.27  Score=37.51  Aligned_cols=75  Identities=12%  Similarity=0.001  Sum_probs=57.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      ..++++||=.|+++|.   ++..|+++|.+++. +..+++.++...+.++..+.++.++..|+.+.+           ..
T Consensus        35 ~~~~~~vLDiGCG~G~---~~~~l~~~g~~v~G-vD~S~~ml~~A~~~~~~~~~~v~~~~~d~~~~~-----------~~   99 (246)
T d1y8ca_          35 NLVFDDYLDLACGTGN---LTENLCPKFKNTWA-VDLSQEMLSEAENKFRSQGLKPRLACQDISNLN-----------IN   99 (246)
T ss_dssp             TCCTTEEEEETCTTST---THHHHGGGSSEEEE-ECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCC-----------CS
T ss_pred             CCCCCeEEEEeCcCCH---HHHHHHHhCCccEe-eccchhhhhhccccccccCccceeeccchhhhc-----------cc
Confidence            4567899999999875   77788999999887 588888777766667777778899998887532           11


Q ss_pred             CCccEEEEcc
Q 024338          103 GTVDILINNA  112 (269)
Q Consensus       103 ~~id~li~~a  112 (269)
                      +++|++++.-
T Consensus       100 ~~fD~i~~~~  109 (246)
T d1y8ca_         100 RKFDLITCCL  109 (246)
T ss_dssp             CCEEEEEECT
T ss_pred             ccccccceee
Confidence            4799988754

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=90.11  E-value=1.2  Score=30.66  Aligned_cols=32  Identities=28%  Similarity=0.279  Sum_probs=28.1

Q ss_pred             CCCEEEEeCCC---CchHHHHHHHHHHcCCcEEEE
Q 024338           25 EAPVAVVTGAS---RGIGRAVATSLGKAGCKVLVN   56 (269)
Q Consensus        25 ~~k~vlItGas---~giG~~~a~~l~~~G~~v~i~   56 (269)
                      +.|++.|.|+|   +..|..+.+.|.+.|+.+.+.
T Consensus        12 ~pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v   46 (136)
T d1iuka_          12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPV   46 (136)
T ss_dssp             HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCeEEEEeecCCCCCchHHHHHHHhcCCCCceEE
Confidence            45899999999   579999999999999998774

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=90.09  E-value=0.22  Score=38.41  Aligned_cols=36  Identities=28%  Similarity=0.370  Sum_probs=31.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEec
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYA   58 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~   58 (269)
                      .+++||+++|-| .|.+|..+|+.|.+.|++|+.+..
T Consensus        27 ~~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD   62 (242)
T d1v9la1          27 GGIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVSD   62 (242)
T ss_dssp             SCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEEC
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEeec
Confidence            478999999997 779999999999999999887543

>d1v71a1 c.79.1.1 (A:6-323) Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c) {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c)
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=90.04  E-value=1.2  Score=35.05  Aligned_cols=56  Identities=21%  Similarity=0.192  Sum_probs=38.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccC
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDV   85 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl   85 (269)
                      ..+|+..+|.-|.++|...+..|...++++..+....  ..+.++..+.++..+..+.
T Consensus        70 ~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~--k~~~l~~~Ga~vi~~~~~~  125 (318)
T d1v71a1          70 AGVLTFSSGNHAQAIALSAKILGIPAKIIMPLDAPEA--KVAATKGYGGQVIMYDRYK  125 (318)
T ss_dssp             HCEEECCSSHHHHHHHHHHHHTTCCEEEEEETTCCHH--HHHHHHHTTCEEEEECTTT
T ss_pred             ceeeeeccchhhHHHHHhhcccccceeecccccccHH--HHHHHHHcCCcEEeccCCc
Confidence            3588889999999999999999988777655543322  2334555566665554433

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=89.86  E-value=0.29  Score=35.81  Aligned_cols=39  Identities=23%  Similarity=0.279  Sum_probs=33.3

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCH
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSS   61 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~   61 (269)
                      ...+.||++.|.|.. .||+.+++.+...|++|+.. ++++
T Consensus        37 ~~~l~gk~vgIiG~G-~IG~~va~~l~~~g~~v~~~-d~~~   75 (181)
T d1qp8a1          37 IPLIQGEKVAVLGLG-EIGTRVGKILAALGAQVRGF-SRTP   75 (181)
T ss_dssp             CCCCTTCEEEEESCS-THHHHHHHHHHHTTCEEEEE-CSSC
T ss_pred             CCcccCceEEEeccc-cccccceeeeeccccccccc-cccc
Confidence            356899999999987 59999999999999999984 5543

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=89.78  E-value=0.19  Score=37.11  Aligned_cols=41  Identities=32%  Similarity=0.288  Sum_probs=33.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHH
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCK   69 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~   69 (269)
                      +.+.|.|++ ..|.++|..|++.|++|.+. .|+++..+.+.+
T Consensus         8 ~KI~ViGaG-~wGtAlA~~La~~g~~V~l~-~r~~~~~~~i~~   48 (189)
T d1n1ea2           8 NKAVVFGSG-AFGTALAMVLSKKCREVCVW-HMNEEEVRLVNE   48 (189)
T ss_dssp             EEEEEECCS-HHHHHHHHHHHTTEEEEEEE-CSCHHHHHHHHH
T ss_pred             ceEEEECCC-HHHHHHHHHHHHcCCeEEEE-EecHHHHHHHhh
Confidence            458888876 69999999999999999884 788876665543

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=89.65  E-value=0.53  Score=35.69  Aligned_cols=74  Identities=14%  Similarity=0.075  Sum_probs=55.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      .-+++++|=.|+++|   .++..|+++|++|+. +..++..++...+.++..+.++.++..|+.+.+     +      -
T Consensus        39 ~~~~~~iLDiGcGtG---~~~~~l~~~~~~v~g-vD~s~~mi~~a~~~~~~~~~~i~~~~~d~~~l~-----~------~  103 (251)
T d1wzna1          39 KREVRRVLDLACGTG---IPTLELAERGYEVVG-LDLHEEMLRVARRKAKERNLKIEFLQGDVLEIA-----F------K  103 (251)
T ss_dssp             SSCCCEEEEETCTTC---HHHHHHHHTTCEEEE-EESCHHHHHHHHHHHHHTTCCCEEEESCGGGCC-----C------C
T ss_pred             CCCCCEEEEeCCCCC---ccchhhcccceEEEE-Eeeccccccccccccccccccchheehhhhhcc-----c------c
Confidence            335689999999887   456678899999887 577887777777777776778899999987643     0      1


Q ss_pred             CCccEEEEc
Q 024338          103 GTVDILINN  111 (269)
Q Consensus       103 ~~id~li~~  111 (269)
                      +..|.+++.
T Consensus       104 ~~fD~I~~~  112 (251)
T d1wzna1         104 NEFDAVTMF  112 (251)
T ss_dssp             SCEEEEEEC
T ss_pred             cccchHhhh
Confidence            368988875

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=89.56  E-value=0.43  Score=35.16  Aligned_cols=35  Identities=14%  Similarity=0.154  Sum_probs=31.0

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEE
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVN   56 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~   56 (269)
                      ..+++||++.|.|.. .||+.+++.+...|.+++..
T Consensus        42 ~~~l~g~tvgIiG~G-~IG~~va~~l~~fg~~v~~~   76 (191)
T d1gdha1          42 GEKLDNKTLGIYGFG-SIGQALAKRAQGFDMDIDYF   76 (191)
T ss_dssp             BCCCTTCEEEEECCS-HHHHHHHHHHHTTTCEEEEE
T ss_pred             cceecccceEEeecc-cchHHHHHHHHhhccccccc
Confidence            357889999999875 99999999999999999884

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=89.54  E-value=0.59  Score=33.39  Aligned_cols=50  Identities=14%  Similarity=0.252  Sum_probs=40.9

Q ss_pred             hhhhhhhcccccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCH
Q 024338           10 VATIEQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSS   61 (269)
Q Consensus        10 ~~~~~~~~~~~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~   61 (269)
                      -+.++.....+..-+.||+++|.| -|.+|+.+|+.+...|++|++ +-.++
T Consensus         7 ~S~~d~i~r~t~~~laGk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V-~E~DP   56 (163)
T d1v8ba1           7 HSLPDGLMRATDFLISGKIVVICG-YGDVGKGCASSMKGLGARVYI-TEIDP   56 (163)
T ss_dssp             HHHHHHHHHHHCCCCTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEE-ECSCH
T ss_pred             hhHHHHHHHHhCceecCCEEEEec-ccccchhHHHHHHhCCCEEEE-EecCc
Confidence            345566666667788999999987 568999999999999999999 46666

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=89.36  E-value=2.4  Score=29.45  Aligned_cols=78  Identities=12%  Similarity=0.061  Sum_probs=53.1

Q ss_pred             CCCCCCEEEEeCCCCc-hHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcC--CcEEEEEccCCCHHHHHHHHHHH
Q 024338           22 QNVEAPVAVVTGASRG-IGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASG--GQALTFGGDVSKEADVESMIKTA   98 (269)
Q Consensus        22 ~~~~~k~vlItGas~g-iG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dls~~~~~~~~~~~~   98 (269)
                      ..++|+++|=.|+.+| +|.    .++.+|+.-+..+..+++..+.+.+.++..+  .++.+++.|..+      ++   
T Consensus        11 ~~~~g~~vlDl~~GtG~~~i----ea~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~D~~~------~l---   77 (152)
T d2esra1          11 PYFNGGRVLDLFAGSGGLAI----EAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAER------AI---   77 (152)
T ss_dssp             SCCCSCEEEEETCTTCHHHH----HHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHH------HH---
T ss_pred             hhCCCCeEEEcCCccCHHHH----HHHHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhcccccc------cc---
Confidence            4578999998887655 554    4567898655557888887777776666543  468888888432      22   


Q ss_pred             HHhcCCccEEEEcc
Q 024338           99 VDAWGTVDILINNA  112 (269)
Q Consensus        99 ~~~~~~id~li~~a  112 (269)
                      ....++.|+++..+
T Consensus        78 ~~~~~~fDiIf~DP   91 (152)
T d2esra1          78 DCLTGRFDLVFLDP   91 (152)
T ss_dssp             HHBCSCEEEEEECC
T ss_pred             cccccccceeEech
Confidence            22235789998765

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=89.23  E-value=0.93  Score=31.83  Aligned_cols=82  Identities=11%  Similarity=0.088  Sum_probs=52.8

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHc------CCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           29 AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS------GGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        29 vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~------~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      +-+.|. |-+|..+|+.|.+.|+.++  ..|+.++..++.++....      -.+...+...+.+.+++....+.+....
T Consensus         3 Ig~IGl-G~MG~~ma~~L~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~~~   79 (156)
T d2cvza2           3 VAFIGL-GAMGYPMAGHLARRFPTLV--WNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYL   79 (156)
T ss_dssp             EEEECC-STTHHHHHHHHHTTSCEEE--ECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTC
T ss_pred             EEEEeH-HHHHHHHHHHHHhCCCEEE--EeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhccccccc
Confidence            556666 7999999999999887654  467776666666554211      0122233445666778888888877665


Q ss_pred             CCccEEEEccC
Q 024338          103 GTVDILINNAG  113 (269)
Q Consensus       103 ~~id~li~~ag  113 (269)
                      .+-.++|.+.-
T Consensus        80 ~~~~~iid~sT   90 (156)
T d2cvza2          80 REGTYWVDATS   90 (156)
T ss_dssp             CTTEEEEECSC
T ss_pred             ccccccccccc
Confidence            55556665553

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=89.09  E-value=0.28  Score=36.47  Aligned_cols=39  Identities=18%  Similarity=0.238  Sum_probs=33.2

Q ss_pred             ccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCC
Q 024338           20 AAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARS   60 (269)
Q Consensus        20 ~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~   60 (269)
                      ...++.||++.|.|.. .||+.+++.+...|++|+.. ++.
T Consensus        39 ~~~~l~~ktvgIiG~G-~IG~~va~~l~~fg~~v~~~-d~~   77 (199)
T d1dxya1          39 IGKELGQQTVGVMGTG-HIGQVAIKLFKGFGAKVIAY-DPY   77 (199)
T ss_dssp             CCCCGGGSEEEEECCS-HHHHHHHHHHHHTTCEEEEE-CSS
T ss_pred             ccccccceeeeeeecc-cccccccccccccceeeecc-CCc
Confidence            3467899999999875 89999999999999999884 443

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=88.66  E-value=0.51  Score=34.81  Aligned_cols=82  Identities=13%  Similarity=0.170  Sum_probs=59.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTV  105 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i  105 (269)
                      +.++=+|-|+||...++.+.+ . +.+|+. .+++++.++...+.++..+.++.++..++++...+..-.     ..+++
T Consensus        25 ~~~lD~t~G~Gghs~~il~~~-~-~~~vi~-~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~~~~~~~~~~-----~~~~v   96 (192)
T d1m6ya2          25 KIILDCTVGEGGHSRAILEHC-P-GCRIIG-IDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLKTL-----GIEKV   96 (192)
T ss_dssp             CEEEETTCTTSHHHHHHHHHC-T-TCEEEE-EESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHHHT-----TCSCE
T ss_pred             CEEEEecCCCcHHHHHHHhcC-C-CCeEEE-eechHHHHHHHHHhhccccccccchhHHHhhHHHHHHHc-----CCCCc
Confidence            344445777888888888776 3 457776 589999888777777777788999999998755432211     12589


Q ss_pred             cEEEEccCCC
Q 024338          106 DILINNAGIT  115 (269)
Q Consensus       106 d~li~~ag~~  115 (269)
                      |.++.-.|.+
T Consensus        97 dgIl~DlGvS  106 (192)
T d1m6ya2          97 DGILMDLGVS  106 (192)
T ss_dssp             EEEEEECSCC
T ss_pred             ceeeeccchh
Confidence            9999999875

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=88.61  E-value=0.24  Score=36.04  Aligned_cols=30  Identities=17%  Similarity=0.232  Sum_probs=26.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCc-EEEE
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCK-VLVN   56 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~-v~i~   56 (269)
                      +|+|+|.||. ..|..+|..|+++|+. |.++
T Consensus         4 ~~kVaIIGaG-paGl~aA~~l~~~G~~~V~v~   34 (196)
T d1gtea4           4 SAKIALLGAG-PASISCASFLARLGYSDITIF   34 (196)
T ss_dssp             GCCEEEECCS-HHHHHHHHHHHHTTCCCEEEE
T ss_pred             CCEEEEECCh-HHHHHHHHHHHHCCCCeEEEE
Confidence            6889999986 8999999999999985 7774

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=88.43  E-value=1  Score=34.59  Aligned_cols=75  Identities=17%  Similarity=0.238  Sum_probs=54.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      ..+|++||=.|+.+|+   ++..+++.|++|+. +..++...+...+..+..+.+..++..|+.+      .+     ..
T Consensus       118 ~~~g~~VLDiGcGsG~---l~i~aa~~g~~V~g-vDis~~av~~A~~na~~n~~~~~~~~~d~~~------~~-----~~  182 (254)
T d2nxca1         118 LRPGDKVLDLGTGSGV---LAIAAEKLGGKALG-VDIDPMVLPQAEANAKRNGVRPRFLEGSLEA------AL-----PF  182 (254)
T ss_dssp             CCTTCEEEEETCTTSH---HHHHHHHTTCEEEE-EESCGGGHHHHHHHHHHTTCCCEEEESCHHH------HG-----GG
T ss_pred             cCccCEEEEcccchhH---HHHHHHhcCCEEEE-EECChHHHHHHHHHHHHcCCceeEEeccccc------cc-----cc
Confidence            3478999999999886   33456778999877 5888888877777777777777777776421      11     12


Q ss_pred             CCccEEEEcc
Q 024338          103 GTVDILINNA  112 (269)
Q Consensus       103 ~~id~li~~a  112 (269)
                      ++.|+++.|.
T Consensus       183 ~~fD~V~ani  192 (254)
T d2nxca1         183 GPFDLLVANL  192 (254)
T ss_dssp             CCEEEEEEEC
T ss_pred             cccchhhhcc
Confidence            5899998773

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=88.40  E-value=0.22  Score=38.42  Aligned_cols=30  Identities=37%  Similarity=0.256  Sum_probs=26.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEE
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVN   56 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~   56 (269)
                      +|.|+|+||. -=|..+|.+|+++|++|+++
T Consensus         1 ~KkV~IIGaG-~aGL~aA~~La~~G~~V~vl   30 (373)
T d1seza1           1 AKRVAVIGAG-VSGLAAAYKLKIHGLNVTVF   30 (373)
T ss_dssp             CCEEEEECCS-HHHHHHHHHHHTTSCEEEEE
T ss_pred             CCEEEEECcC-HHHHHHHHHHHhCCCCEEEE
Confidence            5889999876 67889999999999999986

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=88.32  E-value=0.37  Score=38.07  Aligned_cols=36  Identities=17%  Similarity=0.150  Sum_probs=31.8

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEe
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNY   57 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~   57 (269)
                      ..+++||+++|-|- |.+|..+|+.|.+.|++|+.+.
T Consensus        31 ~~~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vs   66 (293)
T d1hwxa1          31 TPGFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVG   66 (293)
T ss_dssp             CSSSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE
Confidence            45789999999987 6999999999999999988754

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=88.29  E-value=1  Score=33.66  Aligned_cols=78  Identities=21%  Similarity=0.226  Sum_probs=56.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcC-CcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASG-GQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      +|.+||..|+.+|.-.++.-.++  |.+|+. +.++++..+...+.+...+ .++.++..|..+-          ....+
T Consensus        78 ~g~~VLeIGsGsGY~taila~l~--g~~V~~-ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~g----------~~~~~  144 (215)
T d1jg1a_          78 PGMNILEVGTGSGWNAALISEIV--KTDVYT-IERIPELVEFAKRNLERAGVKNVHVILGDGSKG----------FPPKA  144 (215)
T ss_dssp             TTCCEEEECCTTSHHHHHHHHHH--CSCEEE-EESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC----------CGGGC
T ss_pred             ccceEEEecCCCChhHHHHHHhh--CceeEE-EeccHHHHHHHHHHHHHcCCceeEEEECccccC----------CcccC
Confidence            56899999999998888877776  455665 4778777766666666654 6788999998641          12235


Q ss_pred             CccEEEEccCCC
Q 024338          104 TVDILINNAGIT  115 (269)
Q Consensus       104 ~id~li~~ag~~  115 (269)
                      +.|.++.+++..
T Consensus       145 pfD~Iiv~~a~~  156 (215)
T d1jg1a_         145 PYDVIIVTAGAP  156 (215)
T ss_dssp             CEEEEEECSBBS
T ss_pred             cceeEEeecccc
Confidence            899998888764

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=88.07  E-value=0.8  Score=32.25  Aligned_cols=46  Identities=20%  Similarity=0.301  Sum_probs=33.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHc--CCcEEEE-ecCCHHHHHHHHHHH
Q 024338           26 APVAVVTGASRGIGRAVATSLGKA--GCKVLVN-YARSSKEAEEVCKEI   71 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~--G~~v~i~-~~r~~~~~~~~~~~l   71 (269)
                      .|++.|.|+||.||.....-+.++  .++|..+ +.++.+.+.+...+.
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~~ef   50 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRT   50 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHT
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHHHhh
Confidence            489999999999999999998775  4666654 445555554444443

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=88.04  E-value=1  Score=29.96  Aligned_cols=31  Identities=16%  Similarity=0.113  Sum_probs=23.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcC---CcEEEEe
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAG---CKVLVNY   57 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G---~~v~i~~   57 (269)
                      .|.++|.|| |.+|.++|..|.+.|   .+|.++.
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~   53 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCY   53 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEe
Confidence            478999998 699999997776654   5687753

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=87.85  E-value=0.3  Score=38.36  Aligned_cols=34  Identities=29%  Similarity=0.294  Sum_probs=28.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEE
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVN   56 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~   56 (269)
                      ..-+.|.|+|+||. --|..+|..|+++|.+|+++
T Consensus        26 ~~~~pkkV~IIGaG-~aGLsaA~~L~~~G~~V~vl   59 (370)
T d2iida1          26 ATSNPKHVVIVGAG-MAGLSAAYVLAGAGHQVTVL   59 (370)
T ss_dssp             CCSSCCEEEEECCB-HHHHHHHHHHHHHTCEEEEE
T ss_pred             CCCCCCeEEEECCC-HHHHHHHHHHHHCCCCEEEE
Confidence            33355889999986 66999999999999999996

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=87.63  E-value=0.18  Score=33.36  Aligned_cols=40  Identities=8%  Similarity=0.058  Sum_probs=32.1

Q ss_pred             ccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCC
Q 024338           20 AAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARS   60 (269)
Q Consensus        20 ~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~   60 (269)
                      ...+++||+|+|.|++ .-|..+|..|++.+.++++...|+
T Consensus        26 ~~~~f~gK~VlVVG~g-~Sa~dia~~l~~~ak~v~~~~~r~   65 (107)
T d2gv8a2          26 EPELFVGESVLVVGGA-SSANDLVRHLTPVAKHPIYQSLLG   65 (107)
T ss_dssp             CGGGGTTCCEEEECSS-HHHHHHHHHHTTTSCSSEEEECTT
T ss_pred             chhhcCCCeEEEECCC-CCHHHHHHHHHHhcCEEEEEEecC
Confidence            3467899999999987 678899999999988876644443

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=87.59  E-value=0.4  Score=35.00  Aligned_cols=34  Identities=26%  Similarity=0.259  Sum_probs=29.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEE
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVN   56 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~   56 (269)
                      +..+.|.|+|.||. .-|.+.|..++++|++|.++
T Consensus        39 ~~~~~k~V~IIGaG-PAGL~AA~~la~~G~~Vtl~   72 (179)
T d1ps9a3          39 PAVQKKNLAVVGAG-PAGLAFAINAAARGHQVTLF   72 (179)
T ss_dssp             SCSSCCEEEEECCS-HHHHHHHHHHHTTTCEEEEE
T ss_pred             CCCCCcEEEEECcc-HHHHHHHHHHHhhccceEEE
Confidence            44567999999986 88999999999999999995

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=87.51  E-value=2.6  Score=30.24  Aligned_cols=75  Identities=20%  Similarity=0.270  Sum_probs=53.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcC--CcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASG--GQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      +|.+||=.|+++|   .++..+++.+.+|+. +..+++.++...+.++..+  .++.++.+|..          +.....
T Consensus        33 ~g~~VLDiGcGsG---~~s~~lA~~~~~V~a-vD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~----------~~~~~~   98 (186)
T d1l3ia_          33 KNDVAVDVGCGTG---GVTLELAGRVRRVYA-IDRNPEAISTTEMNLQRHGLGDNVTLMEGDAP----------EALCKI   98 (186)
T ss_dssp             TTCEEEEESCTTS---HHHHHHHTTSSEEEE-EESCHHHHHHHHHHHHHTTCCTTEEEEESCHH----------HHHTTS
T ss_pred             CCCEEEEEECCeE---cccccccccceEEEE-ecCCHHHHHHHHHHHHHcCCCcceEEEECchh----------hccccc
Confidence            5788998999876   333455667778776 6899988888888887765  57888988742          222233


Q ss_pred             CCccEEEEccC
Q 024338          103 GTVDILINNAG  113 (269)
Q Consensus       103 ~~id~li~~ag  113 (269)
                      +.+|.++.+.+
T Consensus        99 ~~~D~v~~~~~  109 (186)
T d1l3ia_          99 PDIDIAVVGGS  109 (186)
T ss_dssp             CCEEEEEESCC
T ss_pred             CCcCEEEEeCc
Confidence            57999987754

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=87.41  E-value=0.2  Score=36.08  Aligned_cols=84  Identities=13%  Similarity=0.164  Sum_probs=53.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHc-CCcEEEEecCCHHH-HHHHHHHH--------------HHcCCcEEEEEccCCCHHHH
Q 024338           28 VAVVTGASRGIGRAVATSLGKA-GCKVLVNYARSSKE-AEEVCKEI--------------EASGGQALTFGGDVSKEADV   91 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~-G~~v~i~~~r~~~~-~~~~~~~l--------------~~~~~~~~~~~~Dls~~~~~   91 (269)
                      .+.|.|++|.+|+++++...+. ++.++....|.... ..+...++              ...-... -+..|+|.++..
T Consensus         6 kI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~-DViIDFs~p~~~   84 (162)
T d1diha1           6 RVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDF-DVFIDFTRPEGT   84 (162)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSC-SEEEECSCHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeeccHHHHhccc-ceEEEeccHHHH
Confidence            5899999999999999999876 55655433432211 00000000              0000011 155799999999


Q ss_pred             HHHHHHHHHhcCCccEEEEccCC
Q 024338           92 ESMIKTAVDAWGTVDILINNAGI  114 (269)
Q Consensus        92 ~~~~~~~~~~~~~id~li~~ag~  114 (269)
                      .+.++.+.+.  ++.+|+-..|+
T Consensus        85 ~~~~~~a~~~--~~~~ViGTTG~  105 (162)
T d1diha1          85 LNHLAFCRQH--GKGMVIGTTGF  105 (162)
T ss_dssp             HHHHHHHHHT--TCEEEECCCCC
T ss_pred             HHHHHHHHhc--cceeEEecCCC
Confidence            9999887776  78888877775

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=87.16  E-value=0.48  Score=33.27  Aligned_cols=33  Identities=15%  Similarity=0.253  Sum_probs=25.3

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHH
Q 024338           29 AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKE   63 (269)
Q Consensus        29 vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~   63 (269)
                      +-|.| .|.+|..+++.|+++|+++++. .++++.
T Consensus         3 IgiIG-~G~mG~~ia~~l~~~g~~v~~~-~~~~~~   35 (152)
T d1i36a2           3 VGFIG-FGEVAQTLASRLRSRGVEVVTS-LEGRSP   35 (152)
T ss_dssp             EEEES-CSHHHHHHHHHHHHTTCEEEEC-CTTCCH
T ss_pred             EEEEc-HHHHHHHHHHHHHHCCCeEEEE-cCchhH
Confidence            45554 5899999999999999998874 444433

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=86.82  E-value=0.51  Score=35.59  Aligned_cols=38  Identities=21%  Similarity=0.241  Sum_probs=31.5

Q ss_pred             cccCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEe
Q 024338           19 EAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNY   57 (269)
Q Consensus        19 ~~~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~   57 (269)
                      ...+.-.+|.++|.||+ .-|...|..|+++|++|.++-
T Consensus        42 ~~~~~~~~k~VvIIGaG-pAGl~aA~~l~~~G~~v~l~E   79 (233)
T d1djqa3          42 KFRQTKNKDSVLIVGAG-PSGSEAARVLMESGYTVHLTD   79 (233)
T ss_dssp             CCCCCSSCCEEEEECCS-HHHHHHHHHHHHTTCEEEEEC
T ss_pred             ccCcccCCceEEEEccc-HHHHHHHHHHHHhccceeeEe
Confidence            33455678999999987 678999999999999999853

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=86.50  E-value=0.6  Score=35.08  Aligned_cols=31  Identities=29%  Similarity=0.300  Sum_probs=26.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEe
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNY   57 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~   57 (269)
                      .|.|+|+||. -.|.++|..|+++|++|+++-
T Consensus         6 ~~kVvVIGaG-iaGl~~A~~L~~~G~~V~vie   36 (268)
T d1c0pa1           6 QKRVVVLGSG-VIGLSSALILARKGYSVHILA   36 (268)
T ss_dssp             SCEEEEECCS-HHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCcEEEECcc-HHHHHHHHHHHHCCCCEEEEe
Confidence            4678899876 889999999999999999863

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=86.44  E-value=3.1  Score=27.43  Aligned_cols=82  Identities=15%  Similarity=0.128  Sum_probs=54.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTV  105 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i  105 (269)
                      ||++||.--...+-..+...|-+.|+.|+.. ..+....   .+.+++...++.++-.++-+.+ =-++++++++..+.+
T Consensus         1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~-a~~~~~a---l~~~~~~~~dliilD~~mp~~~-G~e~~~~ir~~~~~~   75 (118)
T d1u0sy_           1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGE-ATNGREA---VEKYKELKPDIVTMDITMPEMN-GIDAIKEIMKIDPNA   75 (118)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEE-ESSHHHH---HHHHHHHCCSEEEEECSCGGGC-HHHHHHHHHHHCTTC
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCceEEE-ECCHHHH---HHHHHhccCCEEEEecCCCCCC-HHHHHHHHHHhCCCC
Confidence            7899999999999999999999999998653 3444333   2233333445544444444443 335677777776777


Q ss_pred             cEEEEcc
Q 024338          106 DILINNA  112 (269)
Q Consensus       106 d~li~~a  112 (269)
                      -+++..+
T Consensus        76 pvi~ls~   82 (118)
T d1u0sy_          76 KIIVCSA   82 (118)
T ss_dssp             CEEEEEC
T ss_pred             cEEEEEc
Confidence            7777664

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=86.37  E-value=0.23  Score=36.27  Aligned_cols=31  Identities=23%  Similarity=0.380  Sum_probs=25.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCcEEEEecCC
Q 024338           28 VAVVTGASRGIGRAVATSLGKAGCKVLVNYARS   60 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~   60 (269)
                      .+.|.|+ |..|.++|..|++.|.+|.+. .|+
T Consensus         2 kI~ViGa-G~~GtalA~~la~~g~~V~l~-~r~   32 (180)
T d1txga2           2 IVSILGA-GAMGSALSVPLVDNGNEVRIW-GTE   32 (180)
T ss_dssp             EEEEESC-CHHHHHHHHHHHHHCCEEEEE-CCG
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEE-Eec
Confidence            3667887 589999999999999999985 664

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=86.12  E-value=0.91  Score=36.02  Aligned_cols=75  Identities=24%  Similarity=0.263  Sum_probs=49.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCc-EEEEecCCHHHHHHHHHHHHHc--CCcEEEEEccCCCHHHHHHHHHHHH
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCK-VLVNYARSSKEAEEVCKEIEAS--GGQALTFGGDVSKEADVESMIKTAV   99 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~-v~i~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dls~~~~~~~~~~~~~   99 (269)
                      ..+||+||-.|++.|+   ++..++++|+. |+. +..++. .....+..+..  ..++.++..|+.+.+.         
T Consensus        31 ~~~~~~VLDiGcG~G~---ls~~aa~~Ga~~V~a-vd~s~~-~~~a~~~~~~n~~~~~v~~~~~~~~~~~~---------   96 (316)
T d1oria_          31 LFKDKVVLDVGSGTGI---LCMFAAKAGARKVIG-IECSSI-SDYAVKIVKANKLDHVVTIIKGKVEEVEL---------   96 (316)
T ss_dssp             HHTTCEEEEETCTTSH---HHHHHHHTTCSEEEE-EECSTT-HHHHHHHHHHTTCTTTEEEEESCTTTCCC---------
T ss_pred             cCCcCEEEEEecCCcH---HHHHHHHhCCCEEEE-EcCcHH-HhhhhhHHHHhCCccccceEeccHHHccc---------
Confidence            4579999999998875   45667888976 555 455543 33333333333  4569999998876431         


Q ss_pred             HhcCCccEEEEcc
Q 024338          100 DAWGTVDILINNA  112 (269)
Q Consensus       100 ~~~~~id~li~~a  112 (269)
                       ..+++|+++...
T Consensus        97 -~~~~~D~ivs~~  108 (316)
T d1oria_          97 -PVEKVDIIISEW  108 (316)
T ss_dssp             -SSSCEEEEEECC
T ss_pred             -ccceeEEEeeee
Confidence             124789988754

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=85.76  E-value=0.48  Score=37.71  Aligned_cols=35  Identities=20%  Similarity=0.309  Sum_probs=28.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARS   60 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~   60 (269)
                      ++|.++|.||+ --|..+|..|+++|.+|+++=.++
T Consensus         1 k~KKI~IIGaG-~sGL~aA~~L~k~G~~V~viEk~~   35 (314)
T d2bi7a1           1 KSKKILIVGAG-FSGAVIGRQLAEKGHQVHIIDQRD   35 (314)
T ss_dssp             CCCEEEEECCS-HHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHhCCCCEEEEECCC
Confidence            47899999986 678889999999999999864443

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=85.59  E-value=3.5  Score=27.26  Aligned_cols=84  Identities=20%  Similarity=0.133  Sum_probs=48.1

Q ss_pred             CEEEEeCCC---CchHHHHHHHHHHcCCcEEEEecCCHHHHH--HHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           27 PVAVVTGAS---RGIGRAVATSLGKAGCKVLVNYARSSKEAE--EVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        27 k~vlItGas---~giG~~~a~~l~~~G~~v~i~~~r~~~~~~--~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      |++.|.|+|   +..|..+.+.|.+.|++++.+ ..+.+...  +....+.+....+..+. =....+.+.++++++.+.
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pV-nP~~~~i~G~~~y~sl~~lp~~~D~vv-i~vp~~~~~~~l~~~~~~   79 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPV-NPNYDEIEGLKCYRSVRELPKDVDVIV-FVVPPKVGLQVAKEAVEA   79 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEE-CTTCSEETTEECBSSGGGSCTTCCEEE-ECSCHHHHHHHHHHHHHT
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEE-ccccccccCccccccchhccccceEEE-EEeCHHHHHHHHHHHHhc
Confidence            789999998   579999999999999987763 33221100  00111111111111111 124566777777777765


Q ss_pred             cCCccEEEEccCC
Q 024338          102 WGTVDILINNAGI  114 (269)
Q Consensus       102 ~~~id~li~~ag~  114 (269)
                        ++..++...|.
T Consensus        80 --g~k~v~~~~g~   90 (116)
T d1y81a1          80 --GFKKLWFQPGA   90 (116)
T ss_dssp             --TCCEEEECTTS
T ss_pred             --CCceEEeccch
Confidence              45666655553

>d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: YxiM C-terminal domain-like
domain: Hypothetical protein YxiM
species: Bacillus subtilis [TaxId: 1423]

Probab=85.22  E-value=1.8  Score=31.40  Aligned_cols=58  Identities=10%  Similarity=0.149  Sum_probs=31.6

Q ss_pred             HHHHHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEcCCc
Q 024338           96 KTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVV  165 (269)
Q Consensus        96 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  165 (269)
                      .++.....+.|++|.+.|.+........+.+.+...    +       +.+...++ +.+..+|.++...
T Consensus        63 ~~~~~~~~~~D~vvi~~G~ND~~~~~~~~~~~~~~~----l-------~~li~~~~-~~~~~~vl~~~~~  120 (208)
T d2o14a2          63 EAILKYIKPGDYFMLQLGINDTNPKHKESEAEFKEV----M-------RDMIRQVK-AKGADVILSTPQG  120 (208)
T ss_dssp             HHHHTTCCTTCEEEEECCTGGGCGGGCCCHHHHHHH----H-------HHHHHHHH-TTTCEEEEECCCC
T ss_pred             HHHHHhcCCCCEEEEEcCCCcccccccccHHHHHHH----H-------HHHHHHHH-hcCCceeeccccc
Confidence            344444557899999998776443334455444332    2       22333333 3456677776543

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=84.80  E-value=0.62  Score=35.27  Aligned_cols=31  Identities=32%  Similarity=0.246  Sum_probs=27.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEE
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVN   56 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~   56 (269)
                      +.+.|+|+||. --|..+|..|+++|.+|+++
T Consensus         3 ~~~kV~IiGaG-~aGl~~A~~L~~~G~~v~v~   33 (265)
T d2voua1           3 TTDRIAVVGGS-ISGLTAALMLRDAGVDVDVY   33 (265)
T ss_dssp             CCSEEEEECCS-HHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCcEEEECcC-HHHHHHHHHHHHCCCCEEEE
Confidence            46789999986 77889999999999999986

>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Sporulation response regulator Spo0F
species: Bacillus subtilis [TaxId: 1423]

Probab=84.73  E-value=3.8  Score=26.98  Aligned_cols=81  Identities=11%  Similarity=0.126  Sum_probs=53.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Q 024338           26 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTV  105 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i  105 (269)
                      ||+|||.--...+-..+.+.|.+.|+.|..  ..+.+..   .+.+++...++.+.-..+-+.+. .++++++++..+.+
T Consensus         1 NkrILvVDD~~~~~~~l~~~L~~~g~~v~~--a~~g~ea---l~~~~~~~~dlillD~~mP~~~G-~el~~~lr~~~~~~   74 (119)
T d1peya_           1 NEKILIVDDQSGIRILLNEVFNKEGYQTFQ--AANGLQA---LDIVTKERPDLVLLDMKIPGMDG-IEILKRMKVIDENI   74 (119)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEE--ESSHHHH---HHHHHHHCCSEEEEESCCTTCCH-HHHHHHHHHHCTTC
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCEEEE--eCCHHHH---HHHHHhCCCCEEEEeccCCCCCH-HHHHHHHHHhCCCC
Confidence            689999999999999999999999999875  3344333   22333334455444443434443 35566777776667


Q ss_pred             cEEEEcc
Q 024338          106 DILINNA  112 (269)
Q Consensus       106 d~li~~a  112 (269)
                      -+++..+
T Consensus        75 pvi~lt~   81 (119)
T d1peya_          75 RVIIMTA   81 (119)
T ss_dssp             EEEEEES
T ss_pred             cEEEEec
Confidence            7777665

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=84.58  E-value=3.1  Score=30.02  Aligned_cols=77  Identities=16%  Similarity=0.167  Sum_probs=54.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCC-cEEEEEccCCCHHHHHHHHHHHHHh
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGG-QALTFGGDVSKEADVESMIKTAVDA  101 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dls~~~~~~~~~~~~~~~  101 (269)
                      .+++..||=.|++.|.   .+..|+++|++|+. +.-++..++...+...+.+. .+.+...|+.+..     .+     
T Consensus        28 ~~~~grvLDiGcG~G~---~~~~la~~g~~v~g-vD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~~-----~~-----   93 (198)
T d2i6ga1          28 VVAPGRTLDLGCGNGR---NSLYLAANGYDVTA-WDKNPASMANLERIKAAEGLDNLQTDLVDLNTLT-----FD-----   93 (198)
T ss_dssp             TSCSCEEEEETCTTSH---HHHHHHHTTCEEEE-EESCHHHHHHHHHHHHHTTCTTEEEEECCTTTCC-----CC-----
T ss_pred             cCCCCcEEEECCCCCH---HHHHHHHHhhhhcc-ccCcHHHHHHHHHHhhhccccchhhhheeccccc-----cc-----
Confidence            3456789999997553   56788999999888 57788777766655555543 4778888887543     11     


Q ss_pred             cCCccEEEEccCC
Q 024338          102 WGTVDILINNAGI  114 (269)
Q Consensus       102 ~~~id~li~~ag~  114 (269)
                       +..|+++.+.-+
T Consensus        94 -~~fD~I~~~~~~  105 (198)
T d2i6ga1          94 -GEYDFILSTVVM  105 (198)
T ss_dssp             -CCEEEEEEESCG
T ss_pred             -ccccEEEEeeee
Confidence             368998876644

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=84.48  E-value=0.48  Score=33.90  Aligned_cols=30  Identities=23%  Similarity=0.243  Sum_probs=25.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEE
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLV   55 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i   55 (269)
                      .|+.|+|.||+ .+|.++|..|.+.|.++.+
T Consensus         2 ~~~~VvIIGgG-~~G~e~A~~l~~~g~~v~v   31 (185)
T d1q1ra1           2 ANDNVVIVGTG-LAGVEVAFGLRASGWEGNI   31 (185)
T ss_dssp             CSCEEEEECCS-HHHHHHHHHHHHTTCCSEE
T ss_pred             CCCCEEEECCc-HHHHHHHHHHHHcCCceEE
Confidence            36788888875 9999999999999988554

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.24  E-value=0.25  Score=42.66  Aligned_cols=33  Identities=15%  Similarity=0.240  Sum_probs=27.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEE
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLV   55 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i   55 (269)
                      ..+++..|+|.|+ ||+|.++++.|+..|..-+.
T Consensus        21 ~~L~~s~VlvvG~-gglG~Ei~knLvl~GVg~it   53 (529)
T d1yova1          21 EALESAHVCLINA-TATGTEILKNLVLPGIGSFT   53 (529)
T ss_dssp             HHHHHCEEEECCC-SHHHHHHHHHHHTTTCSEEE
T ss_pred             HHHhCCCEEEECC-CHHHHHHHHHHHHhcCCEEE
Confidence            4566789999997 69999999999999976443

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=84.20  E-value=3.8  Score=28.99  Aligned_cols=80  Identities=9%  Similarity=0.020  Sum_probs=49.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           24 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        24 ~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      .+|+++|=.|+.+|.   ++-.++.+|++++. +..++...+.+.+.++..+....+...|   .+.   +.........
T Consensus        40 ~~g~~vLDl~~G~G~---~~i~a~~~ga~vv~-vD~~~~a~~~~~~N~~~~~~~~~v~~~~---~d~---~~~~~~~~~~  109 (171)
T d1ws6a1          40 PRRGRFLDPFAGSGA---VGLEAASEGWEAVL-VEKDPEAVRLLKENVRRTGLGARVVALP---VEV---FLPEAKAQGE  109 (171)
T ss_dssp             TTCCEEEEETCSSCH---HHHHHHHTTCEEEE-ECCCHHHHHHHHHHHHHHTCCCEEECSC---HHH---HHHHHHHTTC
T ss_pred             cCCCeEEEeccccch---hhhhhhhccchhhh-cccCHHHHhhhhHHHHhhccccceeeee---hhc---ccccccccCC
Confidence            367777766665442   33356678999876 7899988887777777655443333322   222   2233333335


Q ss_pred             CccEEEEccC
Q 024338          104 TVDILINNAG  113 (269)
Q Consensus       104 ~id~li~~ag  113 (269)
                      +.|+++.++-
T Consensus       110 ~fD~If~DPP  119 (171)
T d1ws6a1         110 RFTVAFMAPP  119 (171)
T ss_dssp             CEEEEEECCC
T ss_pred             ccceeEEccc
Confidence            7999998864

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=84.18  E-value=2.5  Score=27.72  Aligned_cols=32  Identities=22%  Similarity=0.221  Sum_probs=24.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHc---CCcEEEEec
Q 024338           26 APVAVVTGASRGIGRAVATSLGKA---GCKVLVNYA   58 (269)
Q Consensus        26 ~k~vlItGas~giG~~~a~~l~~~---G~~v~i~~~   58 (269)
                      .|.++|.||+ .+|.++|..|.+.   |.+|.++..
T Consensus        18 p~~v~IiGgG-~ig~E~A~~l~~~~~~g~~Vtli~~   52 (117)
T d1feca2          18 PKRALCVGGG-YISIEFAGIFNAYKARGGQVDLAYR   52 (117)
T ss_dssp             CSEEEEECSS-HHHHHHHHHHHHHSCTTCEEEEEES
T ss_pred             CCeEEEECCC-hHHHHHHHHhHhhcccccccceecc
Confidence            3789999886 9999999877654   788887533

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=84.16  E-value=0.72  Score=32.55  Aligned_cols=31  Identities=23%  Similarity=0.167  Sum_probs=25.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC--cEEEE
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGC--KVLVN   56 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~--~v~i~   56 (269)
                      .||+++|.||+ ..|.++|..|.++|.  +|+++
T Consensus         1 ~gkrivIvGgG-~~G~e~A~~l~~~~~~~~Vtli   33 (186)
T d1fcda1           1 AGRKVVVVGGG-TGGATAAKYIKLADPSIEVTLI   33 (186)
T ss_dssp             CCCEEEEECCS-HHHHHHHHHHHHHCTTSEEEEE
T ss_pred             CCCcEEEECcc-HHHHHHHHHHHHcCCCCcEEEE
Confidence            48999999987 789999999999885  55654

>d1pvva2 c.78.1.1 (A:151-313) Ornithine transcarbamoylase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Ornithine transcarbamoylase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=84.14  E-value=4.1  Score=28.62  Aligned_cols=34  Identities=18%  Similarity=0.305  Sum_probs=31.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEE
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVN   56 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~   56 (269)
                      +++|+++++.|-.+.+..+++..+...|+++.+.
T Consensus         1 sl~gl~Ia~VGD~~nv~~Sli~~l~~~g~~v~~~   34 (163)
T d1pvva2           1 TIKGVKVVYVGDGNNVAHSLMIAGTKLGADVVVA   34 (163)
T ss_dssp             CCTTCEEEEESCCCHHHHHHHHHHHHTTCEEEEE
T ss_pred             CcCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEe
Confidence            4789999999999999999999999999998874

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=83.88  E-value=5.5  Score=28.14  Aligned_cols=118  Identities=11%  Similarity=0.124  Sum_probs=59.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHc-----CCcEEEEecCCHHHHHHHHHHHHH----cCCcEEEEEccCCCHHHHHHHHHHH
Q 024338           28 VAVVTGASRGIGRAVATSLGKA-----GCKVLVNYARSSKEAEEVCKEIEA----SGGQALTFGGDVSKEADVESMIKTA   98 (269)
Q Consensus        28 ~vlItGas~giG~~~a~~l~~~-----G~~v~i~~~r~~~~~~~~~~~l~~----~~~~~~~~~~Dls~~~~~~~~~~~~   98 (269)
                      .+.|.||++.-...++..++.+     +.++++ .+.++++++.....+..    .+........  +|   .++++   
T Consensus         5 KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL-~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d---~~eal---   75 (167)
T d1u8xx1           5 SIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKL-YDNDKERQDRIAGACDVFIREKAPDIEFAAT--TD---PEEAF---   75 (167)
T ss_dssp             EEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEE-ECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE--SC---HHHHH---
T ss_pred             eEEEECCChhhhHHHHHHHHhhhhhcCCCEEEE-EcCChhHHHHHHHHHHHHHHHhCCCcceEec--CC---hhhcc---
Confidence            4677788654333344444433     234554 78999887654444332    1332222211  12   22223   


Q ss_pred             HHhcCCccEEEEccCCCCCCcccCCCHHHHHHHHHHHh----------------HHHHHHHHHHHHHHHh-CCCCeEEEE
Q 024338           99 VDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNL----------------TGVFLCTQAAAKIMMK-KKKGRIINI  161 (269)
Q Consensus        99 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~----------------~~~~~l~~~~~~~l~~-~~~~~iv~i  161 (269)
                          .+-|+||..+|....      +...-++.+..|+                .-...+.+.+.+.+.+ .+++-++++
T Consensus        76 ----~~AD~Vvitag~~~~------~g~~rd~~i~~~~Gi~~~~t~g~gg~~~~~r~i~ii~~i~~~i~~~~P~A~li~~  145 (167)
T d1u8xx1          76 ----TDVDFVMAHIRVGKY------AMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNY  145 (167)
T ss_dssp             ----SSCSEEEECCCTTHH------HHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred             ----CCCCEEEECCCcCCC------CceeHHHhhchhcCceeeccccCcchheehhhHHHHHHHHHHHHhhCCCeEEEEe
Confidence                278999999986432      1222333333332                1223344555555543 466778877


Q ss_pred             cCC
Q 024338          162 ASV  164 (269)
Q Consensus       162 sS~  164 (269)
                      |--
T Consensus       146 TNP  148 (167)
T d1u8xx1         146 SNP  148 (167)
T ss_dssp             CSC
T ss_pred             CCH
Confidence            653

>d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=82.92  E-value=0.61  Score=34.68  Aligned_cols=38  Identities=16%  Similarity=0.210  Sum_probs=31.4

Q ss_pred             cCCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecC
Q 024338           21 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYAR   59 (269)
Q Consensus        21 ~~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r   59 (269)
                      ..+++||.|+|.|++. -|..+|..+++.++++.....+
T Consensus        27 ~~~~~gK~V~VvG~G~-Sa~dia~~~~~~~~~~~~~~~~   64 (235)
T d1w4xa2          27 PVDFSGQRVGVIGTGS-SGIQVSPQIAKQAAELFVFQRT   64 (235)
T ss_dssp             CCCCBTCEEEEECCSH-HHHHHHHHHHHHBSEEEEEESS
T ss_pred             CCCCCCCEEEEECCCc-cHHHHHHHHHhhhccccccccc
Confidence            3578999999998874 5899999999999998775444

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=82.92  E-value=4.9  Score=30.94  Aligned_cols=79  Identities=20%  Similarity=0.299  Sum_probs=51.5

Q ss_pred             CCEEEEeCCCCc-hHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcC--CcEEEEEccCCCHHHHHHHHHHHHHhc
Q 024338           26 APVAVVTGASRG-IGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASG--GQALTFGGDVSKEADVESMIKTAVDAW  102 (269)
Q Consensus        26 ~k~vlItGas~g-iG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dls~~~~~~~~~~~~~~~~  102 (269)
                      .++++-.|+++| |+.+++ +  ...+.|+. +..+++.++-..+..+..+  .++.+...|+.+.         ..+.+
T Consensus       111 ~~~vld~g~GsG~i~~~la-~--~~~~~v~a-~Dis~~Al~~A~~Na~~~~~~~~~~i~~~~~~~~---------~~~~~  177 (271)
T d1nv8a_         111 IKTVADIGTGSGAIGVSVA-K--FSDAIVFA-TDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP---------FKEKF  177 (271)
T ss_dssp             CCEEEEESCTTSHHHHHHH-H--HSSCEEEE-EESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG---------GGGGT
T ss_pred             ccEEEEeeeeeehhhhhhh-h--cccceeee-chhhhhHHHHHHHHHHHcCCCceeEEeecccccc---------ccccc
Confidence            355665665555 555544 2  24677776 5888887776666666543  4677888888743         23334


Q ss_pred             CCccEEEEccCCCCC
Q 024338          103 GTVDILINNAGITRD  117 (269)
Q Consensus       103 ~~id~li~~ag~~~~  117 (269)
                      +++|++|.|.-+...
T Consensus       178 ~~fDlIVsNPPYI~~  192 (271)
T d1nv8a_         178 ASIEMILSNPPYVKS  192 (271)
T ss_dssp             TTCCEEEECCCCBCG
T ss_pred             CcccEEEEcccccCc
Confidence            689999999986543

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=82.67  E-value=3  Score=30.77  Aligned_cols=80  Identities=18%  Similarity=0.206  Sum_probs=52.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcC-CcEEEEEccCCCHHHHHHHHHHHHHhcC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASG-GQALTFGGDVSKEADVESMIKTAVDAWG  103 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dls~~~~~~~~~~~~~~~~~  103 (269)
                      +|.+||-.|+.+|.-..+..+.......|+. +..+++..+...+.++..+ .++.++..|..+..          ...+
T Consensus        75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~-id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~~~----------~~~~  143 (213)
T d1dl5a1          75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVS-VEYSRKICEIAKRNVERLGIENVIFVCGDGYYGV----------PEFS  143 (213)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHCTTCEEEE-EESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC----------GGGC
T ss_pred             ccceEEEecCccchhHHHHHHHhCCCCcEEE-eecchhhHHHhhhhHhhhcccccccccCchHHcc----------cccc
Confidence            5789999999887665555445544556666 5788887877777776653 35666777765311          1124


Q ss_pred             CccEEEEccCCC
Q 024338          104 TVDILINNAGIT  115 (269)
Q Consensus       104 ~id~li~~ag~~  115 (269)
                      +.|.++.+++..
T Consensus       144 ~fD~I~~~~~~~  155 (213)
T d1dl5a1         144 PYDVIFVTVGVD  155 (213)
T ss_dssp             CEEEEEECSBBS
T ss_pred             chhhhhhhccHH
Confidence            799999888753

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=82.65  E-value=0.38  Score=35.51  Aligned_cols=30  Identities=20%  Similarity=0.282  Sum_probs=25.8

Q ss_pred             CEEEEeCCCCchHHH-----HHHHHHHcCCcEEEE
Q 024338           27 PVAVVTGASRGIGRA-----VATSLGKAGCKVLVN   56 (269)
Q Consensus        27 k~vlItGas~giG~~-----~a~~l~~~G~~v~i~   56 (269)
                      |..+|||...|+|+.     +|+.|+++|.+|+++
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~i   36 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGY   36 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEE
Confidence            789999999888875     678899999999884

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=82.58  E-value=0.61  Score=35.70  Aligned_cols=27  Identities=37%  Similarity=0.368  Sum_probs=24.2

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCcEEEE
Q 024338           29 AVVTGASRGIGRAVATSLGKAGCKVLVN   56 (269)
Q Consensus        29 vlItGas~giG~~~a~~l~~~G~~v~i~   56 (269)
                      |+|+||. -.|.++|.+|+++|.+|+++
T Consensus         7 vvIIGaG-i~Gls~A~~La~~G~~V~vl   33 (276)
T d1ryia1           7 AVVIGGG-IIGSAIAYYLAKENKNTALF   33 (276)
T ss_dssp             EEEECCS-HHHHHHHHHHHHTTCCEEEE
T ss_pred             EEEECcC-HHHHHHHHHHHHCCCcEEEE
Confidence            7788765 89999999999999999996

>d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Cystathionine beta-synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.17  E-value=3.3  Score=33.22  Aligned_cols=55  Identities=11%  Similarity=0.179  Sum_probs=37.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHcCCcEEEE
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTF   81 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~   81 (269)
                      +....+|+..+|.-|.++|...+..|.+.++++..+.+..  -.+.++..+.++..+
T Consensus        95 ~~~~~vv~aSsGN~g~a~A~~a~~~Gi~~~iv~p~~~~~~--k~~~i~~~GA~vv~v  149 (355)
T d1jbqa_          95 KPGDTIIEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSE--KVDVLRALGAEIVRT  149 (355)
T ss_dssp             CTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEECSCCCHH--HHHHHHHTTCEEEEC
T ss_pred             ccCceEEEecccchhhHHHHHHHhccCCeEEEeeccchHH--HHHHHHhcCCeEEEe
Confidence            3456788999999999999999999999887665544322  123445555555443

>d1fcja_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Salmonella typhimurium [TaxId: 90371]

Probab=81.96  E-value=4.3  Score=31.42  Aligned_cols=36  Identities=19%  Similarity=0.255  Sum_probs=27.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCC
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARS   60 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~   60 (269)
                      +..+.+|+..+|.-|.++|..-+..|.+..+++..+
T Consensus        59 ~~~~~vv~assGn~g~a~A~~a~~~g~~~~i~~p~~   94 (302)
T d1fcja_          59 KPGVELVEPTNGNTGIALAYVAAARGYKLTLTMPET   94 (302)
T ss_dssp             CTTCEEEEECSSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred             CCCceEEEeccccchhHHHHHHHHhccCCceEEeec
Confidence            334678889999999999998888888877655443

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.89  E-value=3.4  Score=30.78  Aligned_cols=80  Identities=16%  Similarity=0.136  Sum_probs=56.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHc------CCcEEEEEccCCCHHHHHHHHHHH
Q 024338           25 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS------GGQALTFGGDVSKEADVESMIKTA   98 (269)
Q Consensus        25 ~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~------~~~~~~~~~Dls~~~~~~~~~~~~   98 (269)
                      +|.+||-.|+.+|.-.++..++......|+. +.++++..+...+.++..      ...+.+...|..+..         
T Consensus        76 ~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~-ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~~---------  145 (224)
T d1i1na_          76 EGAKALDVGSGSGILTACFARMVGCTGKVIG-IDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGY---------  145 (224)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHHHCTTCEEEE-EESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCC---------
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhCCCceEEE-EcCCHHHHHHHHHhccccCcccccccceEEEEeeccccc---------
Confidence            4689999999999888887778777777777 578887777666666542      245777777765211         


Q ss_pred             HHhcCCccEEEEccCCC
Q 024338           99 VDAWGTVDILINNAGIT  115 (269)
Q Consensus        99 ~~~~~~id~li~~ag~~  115 (269)
                       ...++.|.++.+++..
T Consensus       146 -~~~~~fD~I~~~~~~~  161 (224)
T d1i1na_         146 -AEEAPYDAIHVGAAAP  161 (224)
T ss_dssp             -GGGCCEEEEEECSBBS
T ss_pred             -chhhhhhhhhhhcchh
Confidence             1124799999888753

>d1fl2a2 c.3.1.5 (A:326-451) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=80.82  E-value=1.1  Score=30.39  Aligned_cols=39  Identities=15%  Similarity=0.044  Sum_probs=30.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCH
Q 024338           22 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSS   61 (269)
Q Consensus        22 ~~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~   61 (269)
                      +-++||.|+|.|++ .-...-|..|++...+|.++.++++
T Consensus        26 ~~~~gk~V~VvGgG-~sA~~~A~~L~~~a~~V~li~r~~~   64 (126)
T d1fl2a2          26 PLFKGKRVAVIGGG-NSGVEAAIDLAGIVEHVTLLEFAPE   64 (126)
T ss_dssp             GGGBTCEEEEECCS-HHHHHHHHHHHTTBSEEEEECSSSS
T ss_pred             hhcCCceEEEEeCC-HHHHHHHHhhhccCCceEEEecccc
Confidence            55789999999985 5566777788888888888655543

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=80.71  E-value=3.8  Score=32.28  Aligned_cols=77  Identities=19%  Similarity=0.228  Sum_probs=49.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHHHHc--CCcEEEEEccCCCHHHHHHHHHHHHH
Q 024338           23 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEAS--GGQALTFGGDVSKEADVESMIKTAVD  100 (269)
Q Consensus        23 ~~~~k~vlItGas~giG~~~a~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~  100 (269)
                      ..+||+||-.|++.|+   ++..++++|++.+..+..++ ......+..+..  ..++.++..|+.+.+-          
T Consensus        36 ~~~~~~VLDlGcGtG~---ls~~aa~~Ga~~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~~~l~~----------  101 (328)
T d1g6q1_          36 LFKDKIVLDVGCGTGI---LSMFAAKHGAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLEDVHL----------  101 (328)
T ss_dssp             HHTTCEEEEETCTTSH---HHHHHHHTCCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCC----------
T ss_pred             cCCcCEEEEeCCCCCH---HHHHHHHhCCCEEEEEeCCH-HHHHHHHHHHHhCccccceEEEeehhhccC----------
Confidence            4579999999998874   45667788986444345554 333333334333  4578899998876420          


Q ss_pred             hcCCccEEEEccC
Q 024338          101 AWGTVDILINNAG  113 (269)
Q Consensus       101 ~~~~id~li~~ag  113 (269)
                      ..++.|+++...-
T Consensus       102 ~~~~~D~i~se~~  114 (328)
T d1g6q1_         102 PFPKVDIIISEWM  114 (328)
T ss_dssp             SSSCEEEEEECCC
T ss_pred             cccceeEEEEEec
Confidence            1136898887653

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=80.31  E-value=1.3  Score=30.85  Aligned_cols=34  Identities=18%  Similarity=0.233  Sum_probs=26.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcC---CcEEEEecCC
Q 024338           27 PVAVVTGASRGIGRAVATSLGKAG---CKVLVNYARS   60 (269)
Q Consensus        27 k~vlItGas~giG~~~a~~l~~~G---~~v~i~~~r~   60 (269)
                      -.|.|.||||-.|+++.+.|.+++   .++..+.+++
T Consensus         3 mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~   39 (144)
T d2hjsa1           3 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAE   39 (144)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecc
Confidence            358999999999999999998764   4555544443

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=80.04  E-value=1  Score=35.48  Aligned_cols=32  Identities=28%  Similarity=0.239  Sum_probs=22.3

Q ss_pred             CEEEEeCCCCc--h--HHHHHHHHHHcCCcEEEEec
Q 024338           27 PVAVVTGASRG--I--GRAVATSLGKAGCKVLVNYA   58 (269)
Q Consensus        27 k~vlItGas~g--i--G~~~a~~l~~~G~~v~i~~~   58 (269)
                      |.+||++|++|  +  ..+++++|.++|++|..++.
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~   36 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGT   36 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEe
Confidence            56677665434  2  34688999999999987543

>d1vlva2 c.78.1.1 (A:153-313) Ornithine transcarbamoylase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Ornithine transcarbamoylase
species: Thermotoga maritima [TaxId: 2336]

Probab=80.01  E-value=6.1  Score=27.47  Aligned_cols=76  Identities=11%  Similarity=0.185  Sum_probs=48.4

Q ss_pred             CCCCEEEEeC-CCCchHHHHHHHHHHcCCcEEEEecCC----HHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHH
Q 024338           24 VEAPVAVVTG-ASRGIGRAVATSLGKAGCKVLVNYARS----SKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTA   98 (269)
Q Consensus        24 ~~~k~vlItG-as~giG~~~a~~l~~~G~~v~i~~~r~----~~~~~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~   98 (269)
                      ++|+++++.| +.+.+-.+++..+...|+++.+.+...    +....+..+...+.+.++.+.       ++.+++++  
T Consensus         1 l~g~ki~~vGD~~nnV~~Sli~~~~~~g~~i~~~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~-------~d~~~ai~--   71 (161)
T d1vlva2           1 LKGVKVVFMGDTRNNVATSLMIACAKMGMNFVACGPEELKPRSDVFKRCQEIVKETDGSVSFT-------SNLEEALA--   71 (161)
T ss_dssp             STTCEEEEESCTTSHHHHHHHHHHHHTTCEEEEESCGGGCCCHHHHHHHHHHHHHHCCEEEEE-------SCHHHHHT--
T ss_pred             CCCCEEEEEcCCccHHHHHHHHHHHHcCCEEEEecchhhhhhhhHHHHHHHHHhhcCCceEEE-------ecHHHhhh--
Confidence            5799999999 557899999999999999988743221    122222333334445555444       23444444  


Q ss_pred             HHhcCCccEEEEccC
Q 024338           99 VDAWGTVDILINNAG  113 (269)
Q Consensus        99 ~~~~~~id~li~~ag  113 (269)
                           ..|+++--.-
T Consensus        72 -----~aDviyt~~~   81 (161)
T d1vlva2          72 -----GADVVYTDVW   81 (161)
T ss_dssp             -----TCSEEEECCC
T ss_pred             -----hhhheeccce
Confidence                 7888885543