Query 024341
Match_columns 269
No_of_seqs 207 out of 423
Neff 4.7
Searched_HMMs 13730
Date Mon Mar 25 06:35:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024341.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/024341hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2uyza1 d.20.1.1 (A:3-158) Ubi 57.4 8.4 0.00061 29.6 5.6 49 48-96 20-68 (156)
2 d1fzya_ d.20.1.1 (A:) Ubiquiti 52.6 14 0.001 27.7 6.2 36 61-96 28-63 (149)
3 d2e2ca_ d.20.1.1 (A:) Ubiquiti 48.8 16 0.0012 27.9 5.9 36 61-96 35-70 (156)
4 d1jatb_ d.20.1.1 (B:) Ubiquiti 48.4 18 0.0013 27.2 6.1 36 61-96 34-69 (136)
5 d2awfa1 d.20.1.1 (A:7-131) Ubi 47.8 20 0.0015 26.1 6.2 36 61-96 26-61 (125)
6 d2f4za1 d.20.1.1 (A:32-192) Hy 42.0 21 0.0015 27.4 5.7 35 62-96 41-75 (161)
7 d1yrva1 d.20.1.1 (A:1-148) Ubi 41.8 24 0.0017 26.7 5.9 35 62-96 31-65 (148)
8 d2a4da1 d.20.1.1 (A:82-220) Ub 41.0 42 0.003 25.0 7.2 37 60-96 34-70 (139)
9 d2bepa1 d.20.1.1 (A:1-154) Ubi 39.7 28 0.0021 26.1 6.1 36 61-96 33-68 (154)
10 d1pzva_ d.20.1.1 (A:) Ubiquiti 39.5 23 0.0017 26.8 5.5 35 61-95 27-61 (161)
11 d1yf9a1 d.20.1.1 (A:13-170) Ub 37.5 26 0.0019 26.8 5.5 35 62-96 23-57 (158)
12 d1zdna1 d.20.1.1 (A:6-156) Ubi 37.4 31 0.0023 25.9 6.0 35 62-96 33-67 (151)
13 d1j7db_ d.20.1.1 (B:) Ubiquiti 36.7 34 0.0025 25.5 6.0 36 61-96 28-63 (149)
14 d2ucza_ d.20.1.1 (A:) Ubiquiti 36.6 35 0.0025 25.7 6.2 36 61-96 30-65 (164)
15 d1ayza_ d.20.1.1 (A:) Ubiquiti 34.7 34 0.0025 25.4 5.7 34 62-95 30-63 (153)
16 d2z5da1 d.20.1.1 (A:23-174) Ub 34.3 25 0.0018 26.4 4.9 35 62-96 26-60 (152)
17 d1zyma1 a.60.10.1 (A:22-144) E 33.6 24 0.0018 25.6 4.5 28 226-253 16-43 (123)
18 d2fo3a1 d.20.1.1 (A:9-117) Put 33.6 45 0.0033 23.6 6.0 36 61-96 24-59 (109)
19 d1yh2a1 d.20.1.1 (A:1-154) Ubi 33.3 39 0.0028 25.0 5.9 35 62-96 29-63 (154)
20 d1z3da1 d.20.1.1 (A:2-150) Ubi 32.2 39 0.0028 25.1 5.7 35 62-96 30-64 (149)
21 d1i7ka_ d.20.1.1 (A:) Ubiquiti 32.1 38 0.0028 25.2 5.6 35 62-96 28-62 (146)
22 d2a7la1 d.20.1.1 (A:1-117) Ubi 30.7 64 0.0046 22.8 6.5 36 61-96 31-66 (117)
23 d1jata_ d.20.1.1 (A:) Ubiquiti 28.3 50 0.0036 24.7 5.7 36 61-96 29-64 (152)
24 d1z2ua1 d.20.1.1 (A:1-147) Ubi 28.2 50 0.0037 24.1 5.7 35 62-96 28-62 (147)
25 d1y8xa1 d.20.1.1 (A:27-183) Ub 26.5 54 0.0039 24.7 5.7 35 61-96 28-62 (157)
26 d2azeb1 e.63.1.2 (B:201-301) T 25.0 42 0.0031 24.2 4.5 29 226-254 7-35 (101)
27 d1ivsa1 a.2.7.3 (A:797-862) Va 24.4 46 0.0033 21.6 4.2 27 226-252 3-29 (66)
28 d1e43a1 b.71.1.1 (A:394-483) B 24.2 8.8 0.00064 27.8 0.4 14 105-118 66-79 (90)
29 d1y6la_ d.20.1.1 (A:) Ubiquiti 22.6 80 0.0058 23.1 5.9 35 62-96 29-63 (148)
30 d1c4zd_ d.20.1.1 (D:) Ubiquiti 22.4 86 0.0063 22.9 6.0 36 60-96 25-60 (144)
31 d2d3na1 b.71.1.1 (A:399-485) B 22.2 10 0.00074 27.3 0.4 14 105-118 63-76 (87)
32 d1ud2a1 b.71.1.1 (A:391-480) B 20.1 12 0.00088 27.0 0.4 14 105-118 66-79 (90)
No 1
>d2uyza1 d.20.1.1 (A:3-158) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), ubc9 [TaxId: 9606]}
Probab=57.38 E-value=8.4 Score=29.57 Aligned_cols=49 Identities=8% Similarity=0.181 Sum_probs=34.5
Q ss_pred EccceEEcCCCCCCCCceeEEEEEeCCCCCCcccceeeEEEEeCCCCCC
Q 024341 48 YGTMAFHLGRKASESQSHRWTVYVRGATNEDIGVVIKRVVFQLHPSFNN 96 (269)
Q Consensus 48 yGn~A~~l~kk~~~~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~n 96 (269)
+|-.|.+.....+..+...|.+.+.|+.+..-..-+=++.+.+.+.|+.
T Consensus 20 ~g~~~~p~~~~~~~~n~~~W~~~i~gp~gtpY~gg~f~~~i~fp~~YP~ 68 (156)
T d2uyza1 20 FGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPS 68 (156)
T ss_dssp TTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTS
T ss_pred CCeEEEecCCCCCCCcccEEEEEEEcCCCCCccCCEEEEEEeCCccccC
Confidence 4666666554444568999999999987654443344788888888874
No 2
>d1fzya_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Baker's yeast (Saccharomyces cerevisiae), ubc1 [TaxId: 4932]}
Probab=52.60 E-value=14 Score=27.66 Aligned_cols=36 Identities=14% Similarity=-0.020 Sum_probs=29.0
Q ss_pred CCCceeEEEEEeCCCCCCcccceeeEEEEeCCCCCC
Q 024341 61 ESQSHRWTVYVRGATNEDIGVVIKRVVFQLHPSFNN 96 (269)
Q Consensus 61 ~~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~n 96 (269)
++..+.|.+.+.|+.+..-..-+=++.+.+.+.|+.
T Consensus 28 ~~~~~~w~~~I~gp~~t~y~gg~f~~~i~fp~~YP~ 63 (149)
T d1fzya_ 28 ESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPF 63 (149)
T ss_dssp SSCSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTS
T ss_pred CCchhEEEEEEEcCCCCCCCCCceeEEEEecCCccc
Confidence 457899999999987766555666899999999984
No 3
>d2e2ca_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Clam (Spisula solidissima), E-2C [TaxId: 6584]}
Probab=48.84 E-value=16 Score=27.92 Aligned_cols=36 Identities=6% Similarity=0.269 Sum_probs=28.0
Q ss_pred CCCceeEEEEEeCCCCCCcccceeeEEEEeCCCCCC
Q 024341 61 ESQSHRWTVYVRGATNEDIGVVIKRVVFQLHPSFNN 96 (269)
Q Consensus 61 ~~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~n 96 (269)
+++.+.|.+.+.|+.+..-..-+=++.+.+-+.|+.
T Consensus 35 ~~dl~~W~~~i~Gp~~t~yegg~f~~~i~fp~~YP~ 70 (156)
T d2e2ca_ 35 GDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPY 70 (156)
T ss_dssp SSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTS
T ss_pred CCcccEEEEEEEcCCccccCCCEEEEEEEecCCCCC
Confidence 357899999999987766555555788888888873
No 4
>d1jatb_ d.20.1.1 (B:) Ubiquitin conjugating enzyme, UBC {Baker's yeast (Saccharomyces cerevisiae), mms2 [TaxId: 4932]}
Probab=48.42 E-value=18 Score=27.21 Aligned_cols=36 Identities=11% Similarity=0.299 Sum_probs=28.0
Q ss_pred CCCceeEEEEEeCCCCCCcccceeeEEEEeCCCCCC
Q 024341 61 ESQSHRWTVYVRGATNEDIGVVIKRVVFQLHPSFNN 96 (269)
Q Consensus 61 ~~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~n 96 (269)
+...++|.+.+.|+.+..-..-+=++.+.+-+.|+.
T Consensus 34 d~~l~~W~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~ 69 (136)
T d1jatb_ 34 DITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPD 69 (136)
T ss_dssp CTTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTT
T ss_pred CCceeEEEEEEECCCCChhhcCEEEEEEEecCCCCC
Confidence 447999999999987765544555788888898884
No 5
>d2awfa1 d.20.1.1 (A:7-131) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), E2 G1 [TaxId: 9606]}
Probab=47.76 E-value=20 Score=26.13 Aligned_cols=36 Identities=11% Similarity=0.230 Sum_probs=27.7
Q ss_pred CCCceeEEEEEeCCCCCCcccceeeEEEEeCCCCCC
Q 024341 61 ESQSHRWTVYVRGATNEDIGVVIKRVVFQLHPSFNN 96 (269)
Q Consensus 61 ~~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~n 96 (269)
+...+.|.+-|.|+.+..-..-+=++.|.+.+.|+.
T Consensus 26 ~~dl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~ 61 (125)
T d2awfa1 26 DNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPL 61 (125)
T ss_dssp TTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTS
T ss_pred CCCceEEEEEEeCCCCcccCCCeeEEEEecCCCcCC
Confidence 346888999999987766555666778888888874
No 6
>d2f4za1 d.20.1.1 (A:32-192) Hypothetical protein Tgtwinscan_2721, E2 domain {Toxoplasma gondii [TaxId: 5811]}
Probab=41.99 E-value=21 Score=27.35 Aligned_cols=35 Identities=14% Similarity=0.296 Sum_probs=27.1
Q ss_pred CCceeEEEEEeCCCCCCcccceeeEEEEeCCCCCC
Q 024341 62 SQSHRWTVYVRGATNEDIGVVIKRVVFQLHPSFNN 96 (269)
Q Consensus 62 ~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~n 96 (269)
++...|.+.|.|+.+..-..-+=++.+.+.+.|+.
T Consensus 41 ~nl~~W~~~I~Gp~~TpY~gg~f~~~i~fp~~YP~ 75 (161)
T d2f4za1 41 GDIHRWRGFIAGPLGTPYEGGHFTLDIVIPPDYPY 75 (161)
T ss_dssp TEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTT
T ss_pred CccceeEEEEeCCCCCccCCCEEEEEEeccCCCCC
Confidence 47889999999987766544444888888888875
No 7
>d1yrva1 d.20.1.1 (A:1-148) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), E2 U [TaxId: 9606]}
Probab=41.80 E-value=24 Score=26.66 Aligned_cols=35 Identities=14% Similarity=0.329 Sum_probs=27.2
Q ss_pred CCceeEEEEEeCCCCCCcccceeeEEEEeCCCCCC
Q 024341 62 SQSHRWTVYVRGATNEDIGVVIKRVVFQLHPSFNN 96 (269)
Q Consensus 62 ~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~n 96 (269)
+..+.|.+.+.|+.+.....-+=++.+.+.++|+.
T Consensus 31 ~n~~~W~~~i~Gp~~t~yegg~f~~~i~fp~~YP~ 65 (148)
T d1yrva1 31 EDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNY 65 (148)
T ss_dssp TTSCEEEEEEECCTTSTTTTCEEEEEEECCTTBTT
T ss_pred CcccEEEEEEEeCCCCccCCCceEEEEEecccccc
Confidence 47889999999987665544455888888888885
No 8
>d2a4da1 d.20.1.1 (A:82-220) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), E2 variant 1 [TaxId: 9606]}
Probab=40.95 E-value=42 Score=25.00 Aligned_cols=37 Identities=16% Similarity=0.270 Sum_probs=28.0
Q ss_pred CCCCceeEEEEEeCCCCCCcccceeeEEEEeCCCCCC
Q 024341 60 SESQSHRWTVYVRGATNEDIGVVIKRVVFQLHPSFNN 96 (269)
Q Consensus 60 ~~~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~n 96 (269)
.+....+|.+.+.|+.+..-..=+=++.+.+-+.|+.
T Consensus 34 ~d~nl~~W~~~I~Gp~~TpYegg~f~~~i~fp~~YP~ 70 (139)
T d2a4da1 34 EDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPE 70 (139)
T ss_dssp TCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTT
T ss_pred CcccccEEEEEEECCCCCchhcCEEEEEEECCCCCCC
Confidence 3457888999999998766555566677778888874
No 9
>d2bepa1 d.20.1.1 (A:1-154) Ubiquitin-conjugating enzyme E2-25 kDa, E2 domain {Cow (Bos taurus) [TaxId: 9913]}
Probab=39.70 E-value=28 Score=26.12 Aligned_cols=36 Identities=3% Similarity=0.003 Sum_probs=27.5
Q ss_pred CCCceeEEEEEeCCCCCCcccceeeEEEEeCCCCCC
Q 024341 61 ESQSHRWTVYVRGATNEDIGVVIKRVVFQLHPSFNN 96 (269)
Q Consensus 61 ~~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~n 96 (269)
+++...|.+-+.|+.+.....-+=++.+.|.+.|+.
T Consensus 33 ~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~ 68 (154)
T d2bepa1 33 DENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPF 68 (154)
T ss_dssp SSSSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTS
T ss_pred CCChhheEeeEecCccccccCCeeEEEEeccccccC
Confidence 346789999999987765544455888999999883
No 10
>d1pzva_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Nematode (Caenorhabditis elegans), E2-19 kDa [TaxId: 6239]}
Probab=39.48 E-value=23 Score=26.80 Aligned_cols=35 Identities=11% Similarity=0.286 Sum_probs=27.1
Q ss_pred CCCceeEEEEEeCCCCCCcccceeeEEEEeCCCCC
Q 024341 61 ESQSHRWTVYVRGATNEDIGVVIKRVVFQLHPSFN 95 (269)
Q Consensus 61 ~~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~ 95 (269)
+...+.|.+-|.|+.+..-..-+=++.+.|.+.|+
T Consensus 27 ~~dl~~W~~~i~gp~~tpY~gg~f~~~i~fp~~YP 61 (161)
T d1pzva_ 27 DNDIYKWEVLVIGPPDTLYEGGFFKAILDFPRDYP 61 (161)
T ss_dssp TTCTTEEEEEEECCTTSSCSSCEEEEEEECCTTGG
T ss_pred CCCceEEEEEEECCcchhhcCCEEEEEEeCCCCCC
Confidence 34678999999998766655566678888888887
No 11
>d1yf9a1 d.20.1.1 (A:13-170) Ubiquitin conjugating enzyme, UBC {Leishmania major [TaxId: 5664]}
Probab=37.48 E-value=26 Score=26.77 Aligned_cols=35 Identities=11% Similarity=0.032 Sum_probs=28.3
Q ss_pred CCceeEEEEEeCCCCCCcccceeeEEEEeCCCCCC
Q 024341 62 SQSHRWTVYVRGATNEDIGVVIKRVVFQLHPSFNN 96 (269)
Q Consensus 62 ~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~n 96 (269)
+.+.+|.|-++|+.+..-..-+=++.+.+-+.|+.
T Consensus 23 d~~~~w~v~i~Gp~~TpY~gg~f~~~i~fp~~YP~ 57 (158)
T d1yf9a1 23 DTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPF 57 (158)
T ss_dssp SSTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTT
T ss_pred CCceEEEEEEECCCCCCccCcEEEEEEECcccchh
Confidence 57889999999998766555555789999999985
No 12
>d1zdna1 d.20.1.1 (A:6-156) Ubiquitin conjugating enzyme, UBC {Human(Homo sapiens), E2 S [TaxId: 9606]}
Probab=37.40 E-value=31 Score=25.92 Aligned_cols=35 Identities=14% Similarity=0.146 Sum_probs=26.7
Q ss_pred CCceeEEEEEeCCCCCCcccceeeEEEEeCCCCCC
Q 024341 62 SQSHRWTVYVRGATNEDIGVVIKRVVFQLHPSFNN 96 (269)
Q Consensus 62 ~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~n 96 (269)
+....|.+.+.|+.+..-..-+=++.+.+.+.|+.
T Consensus 33 ~dl~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~ 67 (151)
T d1zdna1 33 EDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPA 67 (151)
T ss_dssp SCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTT
T ss_pred cchheeEEEEecCCCcCccCCceeeeeecCCCCCC
Confidence 46788999999987765555566678888888874
No 13
>d1j7db_ d.20.1.1 (B:) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), ubc13 [TaxId: 9606]}
Probab=36.66 E-value=34 Score=25.48 Aligned_cols=36 Identities=14% Similarity=0.182 Sum_probs=27.1
Q ss_pred CCCceeEEEEEeCCCCCCcccceeeEEEEeCCCCCC
Q 024341 61 ESQSHRWTVYVRGATNEDIGVVIKRVVFQLHPSFNN 96 (269)
Q Consensus 61 ~~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~n 96 (269)
+++...|.+.|.|+.+..-..-+=++.+.+.+.|+.
T Consensus 28 ~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~ 63 (149)
T d1j7db_ 28 ESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPM 63 (149)
T ss_dssp SSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTT
T ss_pred CCcccEeeeEEECCcccccCCCEEEEEEecCCcccC
Confidence 347788999999987665444444888888888874
No 14
>d2ucza_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Baker's yeast (Saccharomyces cerevisiae), ubc7 [TaxId: 4932]}
Probab=36.65 E-value=35 Score=25.75 Aligned_cols=36 Identities=8% Similarity=0.241 Sum_probs=27.0
Q ss_pred CCCceeEEEEEeCCCCCCcccceeeEEEEeCCCCCC
Q 024341 61 ESQSHRWTVYVRGATNEDIGVVIKRVVFQLHPSFNN 96 (269)
Q Consensus 61 ~~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~n 96 (269)
+++...|.|.|.|+.+..-..-+=++.+.+.+.|+-
T Consensus 30 e~nl~~w~~~I~Gp~~tpy~gg~f~~~i~fp~~YP~ 65 (164)
T d2ucza_ 30 ENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPL 65 (164)
T ss_dssp SSCCSEEEEEEECCTTSTTTTCEEEEEEECCTTTTT
T ss_pred ccchhhhheeeeCCCcccccCCeeEEEEecCCCCCC
Confidence 446789999999987765544555778888888873
No 15
>d1ayza_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Baker's yeast (Saccharomyces cerevisiae), ubc2 (RAD6) [TaxId: 4932]}
Probab=34.72 E-value=34 Score=25.36 Aligned_cols=34 Identities=9% Similarity=0.274 Sum_probs=26.5
Q ss_pred CCceeEEEEEeCCCCCCcccceeeEEEEeCCCCC
Q 024341 62 SQSHRWTVYVRGATNEDIGVVIKRVVFQLHPSFN 95 (269)
Q Consensus 62 ~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~ 95 (269)
+....|.+.+.|+.+..-..-+=++.+.+.+.|+
T Consensus 30 ~n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP 63 (153)
T d1ayza_ 30 DNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYP 63 (153)
T ss_dssp TEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTT
T ss_pred CcHHhHhheeeCCCCCccCCCEEEEEEecCcccc
Confidence 4789999999998776554445588888888887
No 16
>d2z5da1 d.20.1.1 (A:23-174) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), E2 H [TaxId: 9606]}
Probab=34.29 E-value=25 Score=26.44 Aligned_cols=35 Identities=11% Similarity=0.084 Sum_probs=26.8
Q ss_pred CCceeEEEEEeCCCCCCcccceeeEEEEeCCCCCC
Q 024341 62 SQSHRWTVYVRGATNEDIGVVIKRVVFQLHPSFNN 96 (269)
Q Consensus 62 ~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~n 96 (269)
++.++|.|.+.|+.+..-..=+=++.+.+-+.|+.
T Consensus 26 ~~l~~w~v~i~Gp~~TpY~gg~f~~~i~fp~~YP~ 60 (152)
T d2z5da1 26 GGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPF 60 (152)
T ss_dssp EETTEEEEEEECCTTSTTTTCEEEEEEECCTTTTT
T ss_pred CChheEEEEEEcCCCCCcCCCEEEEEEEecCCCCC
Confidence 36788999999987765544455788888888974
No 17
>d1zyma1 a.60.10.1 (A:22-144) Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain {Escherichia coli [TaxId: 562]}
Probab=33.65 E-value=24 Score=25.63 Aligned_cols=28 Identities=14% Similarity=0.259 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 024341 226 ADELLKIASARQQVQAHIIKLRRELNMM 253 (269)
Q Consensus 226 ~~El~~l~~a~~~V~~~i~~lk~~l~~~ 253 (269)
..|+.|+..|..++..++..+++++...
T Consensus 16 ~~E~~rl~~A~~~~~~~L~~l~~~~~~~ 43 (123)
T d1zyma1 16 DQEVERFLSGRAKASAQLETIKTKAGET 43 (123)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5789999999999999999999988653
No 18
>d2fo3a1 d.20.1.1 (A:9-117) Putative ubiquitin-conjugating enzyme, E2 domain {Plasmodium chabaudi [TaxId: 5825]}
Probab=33.59 E-value=45 Score=23.58 Aligned_cols=36 Identities=11% Similarity=0.141 Sum_probs=24.2
Q ss_pred CCCceeEEEEEeCCCCCCcccceeeEEEEeCCCCCC
Q 024341 61 ESQSHRWTVYVRGATNEDIGVVIKRVVFQLHPSFNN 96 (269)
Q Consensus 61 ~~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~n 96 (269)
++..+.|.+.+.|+.+..-..-+=++.+.+-+.|+.
T Consensus 24 ~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~ 59 (109)
T d2fo3a1 24 PNNIRIWIVKYVGLENTIYANEVYKLKIIFPDDYPL 59 (109)
T ss_dssp TTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTT
T ss_pred CCcccEEEEEEecCchhhhcCCCceEEEEeccccCC
Confidence 346889999999987654443444566666666663
No 19
>d1yh2a1 d.20.1.1 (A:1-154) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), E2 T [TaxId: 9606]}
Probab=33.26 E-value=39 Score=25.05 Aligned_cols=35 Identities=9% Similarity=0.071 Sum_probs=27.8
Q ss_pred CCceeEEEEEeCCCCCCcccceeeEEEEeCCCCCC
Q 024341 62 SQSHRWTVYVRGATNEDIGVVIKRVVFQLHPSFNN 96 (269)
Q Consensus 62 ~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~n 96 (269)
+....|.+.+.|+.+..-..=+=++.+.+-+.|+.
T Consensus 29 ~~~~~w~~~I~Gp~~TpY~gg~f~~~i~~p~~YP~ 63 (154)
T d1yh2a1 29 DQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPF 63 (154)
T ss_dssp SCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTS
T ss_pred cchhhhhceEeCCCCCCCCCCEEEEEEecCccccC
Confidence 56889999999988766656666788888888873
No 20
>d1z3da1 d.20.1.1 (A:2-150) Ubiquitin conjugating enzyme, UBC {Nematode (Caenorhabditis elegans), E2-21.5 kDa [TaxId: 6239]}
Probab=32.25 E-value=39 Score=25.10 Aligned_cols=35 Identities=9% Similarity=0.234 Sum_probs=28.0
Q ss_pred CCceeEEEEEeCCCCCCcccceeeEEEEeCCCCCC
Q 024341 62 SQSHRWTVYVRGATNEDIGVVIKRVVFQLHPSFNN 96 (269)
Q Consensus 62 ~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~n 96 (269)
++...|.+.+.|+.+..-..-+=++.+.+.+.|+.
T Consensus 30 ~n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP~ 64 (149)
T d1z3da1 30 DNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPN 64 (149)
T ss_dssp TEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTT
T ss_pred CchhhhceeEECCCCccccCCEEEEEEEecCcCCC
Confidence 46889999999987766555566899999999974
No 21
>d1i7ka_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), ubch10 [TaxId: 9606]}
Probab=32.15 E-value=38 Score=25.25 Aligned_cols=35 Identities=9% Similarity=0.249 Sum_probs=26.1
Q ss_pred CCceeEEEEEeCCCCCCcccceeeEEEEeCCCCCC
Q 024341 62 SQSHRWTVYVRGATNEDIGVVIKRVVFQLHPSFNN 96 (269)
Q Consensus 62 ~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~n 96 (269)
++.+.|.+-+.|+.+..-..-+=++.+.+.+.|+.
T Consensus 28 ~d~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~ 62 (146)
T d1i7ka_ 28 DNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPY 62 (146)
T ss_dssp TEEEEEEEEEEBCTTSTTBTCEEEEEEECCTTTTT
T ss_pred CcccEEEEEEecCccccccCCEEEEEEEecCCCCc
Confidence 57999999999987655444444778888888873
No 22
>d2a7la1 d.20.1.1 (A:1-117) Ubiquitin-protein ligase W (E2 W) {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.73 E-value=64 Score=22.82 Aligned_cols=36 Identities=14% Similarity=0.265 Sum_probs=26.1
Q ss_pred CCCceeEEEEEeCCCCCCcccceeeEEEEeCCCCCC
Q 024341 61 ESQSHRWTVYVRGATNEDIGVVIKRVVFQLHPSFNN 96 (269)
Q Consensus 61 ~~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~n 96 (269)
+++...|.+-+.|+.+..-..-+=++.+.+-+.|+.
T Consensus 31 ~~~l~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~ 66 (117)
T d2a7la1 31 QNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPF 66 (117)
T ss_dssp CCSCEEEEEEEECCTTSTTTTCEEEEEEEECTTTTT
T ss_pred CCCceEEEEEEeCCCCccccCCeeeEEEecCccccc
Confidence 457889999999987655444444677777777774
No 23
>d1jata_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Baker's yeast (Saccharomyces cerevisiae), ubc13 [TaxId: 4932]}
Probab=28.35 E-value=50 Score=24.66 Aligned_cols=36 Identities=11% Similarity=0.136 Sum_probs=28.3
Q ss_pred CCCceeEEEEEeCCCCCCcccceeeEEEEeCCCCCC
Q 024341 61 ESQSHRWTVYVRGATNEDIGVVIKRVVFQLHPSFNN 96 (269)
Q Consensus 61 ~~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~n 96 (269)
+++...|.+.|.|+.+.....-+=++.+.+-+.|+.
T Consensus 29 ~~n~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~ 64 (152)
T d1jata_ 29 DDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPM 64 (152)
T ss_dssp TTEEEEEEEEEECCTTSTTTTEEEEEEEECCTTTTT
T ss_pred CCccchhheeeeCCchhhhcCCEEEEEEecCccCCC
Confidence 357899999999987766555566788888888874
No 24
>d1z2ua1 d.20.1.1 (A:1-147) Ubiquitin conjugating enzyme, UBC {Caenorhabditis elegans, E2 2 [TaxId: 6239]}
Probab=28.15 E-value=50 Score=24.14 Aligned_cols=35 Identities=6% Similarity=0.153 Sum_probs=27.3
Q ss_pred CCceeEEEEEeCCCCCCcccceeeEEEEeCCCCCC
Q 024341 62 SQSHRWTVYVRGATNEDIGVVIKRVVFQLHPSFNN 96 (269)
Q Consensus 62 ~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~n 96 (269)
++...|.+.+.|+.+..-..-+=++.+.+-+.|+.
T Consensus 28 ~n~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~ 62 (147)
T d1z2ua1 28 DDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPF 62 (147)
T ss_dssp TEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTS
T ss_pred CchhhhhheecCCCCCCcCCCceEEEEecCcCCCC
Confidence 47889999999987766655555788888888873
No 25
>d1y8xa1 d.20.1.1 (A:27-183) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), E2 M [TaxId: 9606]}
Probab=26.54 E-value=54 Score=24.69 Aligned_cols=35 Identities=3% Similarity=-0.010 Sum_probs=23.6
Q ss_pred CCCceeEEEEEeCCCCCCcccceeeEEEEeCCCCCC
Q 024341 61 ESQSHRWTVYVRGATNEDIGVVIKRVVFQLHPSFNN 96 (269)
Q Consensus 61 ~~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~n 96 (269)
++..+.|.+.+ |+.+..-..-+=++.+.|.+.|+.
T Consensus 28 ~~~l~~w~~~i-~p~~t~Y~gg~f~~~i~fp~~YP~ 62 (157)
T d1y8xa1 28 PDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPH 62 (157)
T ss_dssp TTCTTEEEEEE-CCSSSTTTTBCEEEEEECCTTTTT
T ss_pred CCcceEEEEEE-CCCCCCcCCCeEEEEEEecCCCCC
Confidence 35789999988 655444444455666667788873
No 26
>d2azeb1 e.63.1.2 (B:201-301) Transcription factor E2F1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.99 E-value=42 Score=24.16 Aligned_cols=29 Identities=14% Similarity=0.293 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 024341 226 ADELLKIASARQQVQAHIIKLRRELNMMN 254 (269)
Q Consensus 226 ~~El~~l~~a~~~V~~~i~~lk~~l~~~e 254 (269)
++|+..|.+..+.++..|..+.++|+.+-
T Consensus 7 ~~El~~L~~~E~~LD~li~~~~~~L~~lt 35 (101)
T d2azeb1 7 TQDLRQLQESEQQLDHLMNICTTQLRLLS 35 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 58899999999999999999999988764
No 27
>d1ivsa1 a.2.7.3 (A:797-862) Valyl-tRNA synthetase (ValRS) C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=24.40 E-value=46 Score=21.57 Aligned_cols=27 Identities=11% Similarity=0.037 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 024341 226 ADELLKIASARQQVQAHIIKLRRELNM 252 (269)
Q Consensus 226 ~~El~~l~~a~~~V~~~i~~lk~~l~~ 252 (269)
..|+.||..-..++..+|..+..+|..
T Consensus 3 ~~E~~RL~K~l~kl~~~i~~~~~kL~N 29 (66)
T d1ivsa1 3 EEWRRRQEKRLKELLALAERSQRKLAS 29 (66)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 368899999999999999999988864
No 28
>d1e43a1 b.71.1.1 (A:394-483) Bacterial alpha-Amylase {Bacillus licheniformis [TaxId: 1402]}
Probab=24.24 E-value=8.8 Score=27.79 Aligned_cols=14 Identities=43% Similarity=1.142 Sum_probs=11.7
Q ss_pred CcEEEEeeEeeEEE
Q 024341 105 PFELQECGWGEFEI 118 (269)
Q Consensus 105 PFeVtE~GWGEF~I 118 (269)
+=.|.|.|||+|.+
T Consensus 66 ~V~id~~G~g~F~v 79 (90)
T d1e43a1 66 PVVINSEGWGEFHV 79 (90)
T ss_dssp CEECCTTSEEEEEE
T ss_pred EEEECCCceEEEEE
Confidence 45678999999987
No 29
>d1y6la_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), ubch8 [TaxId: 9606]}
Probab=22.57 E-value=80 Score=23.11 Aligned_cols=35 Identities=9% Similarity=0.133 Sum_probs=26.1
Q ss_pred CCceeEEEEEeCCCCCCcccceeeEEEEeCCCCCC
Q 024341 62 SQSHRWTVYVRGATNEDIGVVIKRVVFQLHPSFNN 96 (269)
Q Consensus 62 ~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~n 96 (269)
++...|.+.+.|+.+..-..=+=++.+.+.+.|+.
T Consensus 29 ~n~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~YP~ 63 (148)
T d1y6la_ 29 DNIYEWRSTILGPPGSVYEGGVFFLDITFSPDYPF 63 (148)
T ss_dssp SCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTS
T ss_pred cccceeceEEECCCCCCcCCCeEEEEEecCcccCC
Confidence 46788999999987655444455778888888874
No 30
>d1c4zd_ d.20.1.1 (D:) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), ubch7 [TaxId: 9606]}
Probab=22.39 E-value=86 Score=22.85 Aligned_cols=36 Identities=11% Similarity=0.147 Sum_probs=25.0
Q ss_pred CCCCceeEEEEEeCCCCCCcccceeeEEEEeCCCCCC
Q 024341 60 SESQSHRWTVYVRGATNEDIGVVIKRVVFQLHPSFNN 96 (269)
Q Consensus 60 ~~~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~n 96 (269)
++++...|.+.+ |+.+..-..-+=++.+.+-+.|+.
T Consensus 25 ~~~n~~~w~~~i-gp~~tpY~gg~f~~~i~fp~~YP~ 60 (144)
T d1c4zd_ 25 DEANLLTWQGLI-VPDNPPYDKGAFRIEINFPAEYPF 60 (144)
T ss_dssp SCSSSSEEEEEE-CCCSSSCCSCCEEEEEECCTTTTT
T ss_pred CCCcceEEEEEE-CCCCcCccCCEEEEEEEecCcccC
Confidence 345788999988 776554433334788888888873
No 31
>d2d3na1 b.71.1.1 (A:399-485) Bacterial alpha-Amylase {Bacillus sp. 707 [TaxId: 1416]}
Probab=22.24 E-value=10 Score=27.28 Aligned_cols=14 Identities=29% Similarity=0.928 Sum_probs=11.2
Q ss_pred CcEEEEeeEeeEEE
Q 024341 105 PFELQECGWGEFEI 118 (269)
Q Consensus 105 PFeVtE~GWGEF~I 118 (269)
+=.|.+.|||+|.+
T Consensus 63 ~V~id~~G~g~F~v 76 (87)
T d2d3na1 63 TVTINADGWGNFSV 76 (87)
T ss_dssp EEECCTTSEEEEEE
T ss_pred EEEECCCceEEEEE
Confidence 33567999999987
No 32
>d1ud2a1 b.71.1.1 (A:391-480) Bacterial alpha-Amylase {Bacillus sp., ksm-k38 [TaxId: 1409]}
Probab=20.11 E-value=12 Score=27.05 Aligned_cols=14 Identities=36% Similarity=0.795 Sum_probs=11.1
Q ss_pred CcEEEEeeEeeEEE
Q 024341 105 PFELQECGWGEFEI 118 (269)
Q Consensus 105 PFeVtE~GWGEF~I 118 (269)
+=.|.+.|||+|.+
T Consensus 66 ~V~id~~G~g~F~V 79 (90)
T d1ud2a1 66 SVTINGDGWGEFFT 79 (90)
T ss_dssp EEECCTTSEEEEEE
T ss_pred EEEECCCceEEEEE
Confidence 33567999999987
Done!