Query 024345
Match_columns 269
No_of_seqs 246 out of 2086
Neff 6.0
Searched_HMMs 29240
Date Mon Mar 25 06:39:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024345.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024345hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3n0v_A Formyltetrahydrofolate 100.0 5.6E-58 1.9E-62 421.5 26.6 218 37-268 3-228 (286)
2 3o1l_A Formyltetrahydrofolate 100.0 5E-58 1.7E-62 424.6 25.0 217 39-268 19-243 (302)
3 3lou_A Formyltetrahydrofolate 100.0 9.9E-58 3.4E-62 420.9 24.9 219 37-268 5-233 (292)
4 3obi_A Formyltetrahydrofolate 100.0 1.3E-57 4.3E-62 419.5 21.7 217 40-268 4-228 (288)
5 3nrb_A Formyltetrahydrofolate 100.0 1.1E-57 3.6E-62 419.8 20.2 215 40-268 5-227 (287)
6 3p9x_A Phosphoribosylglycinami 100.0 1.3E-37 4.4E-42 274.9 14.4 133 128-268 2-143 (211)
7 3tqr_A Phosphoribosylglycinami 100.0 5.8E-37 2E-41 271.4 15.4 134 126-268 3-145 (215)
8 4ds3_A Phosphoribosylglycinami 100.0 9.1E-37 3.1E-41 269.1 15.4 134 127-268 6-148 (209)
9 3kcq_A Phosphoribosylglycinami 100.0 8.6E-37 3E-41 270.3 14.8 135 125-268 5-144 (215)
10 3da8_A Probable 5'-phosphoribo 100.0 3.5E-36 1.2E-40 266.4 15.1 134 125-268 9-151 (215)
11 1jkx_A GART;, phosphoribosylgl 100.0 6.1E-36 2.1E-40 264.1 14.5 132 129-268 1-141 (212)
12 1meo_A Phosophoribosylglycinam 100.0 1.1E-35 3.7E-40 262.1 14.6 132 129-268 1-141 (209)
13 3av3_A Phosphoribosylglycinami 100.0 3.2E-35 1.1E-39 259.3 14.9 133 128-268 3-144 (212)
14 3auf_A Glycinamide ribonucleot 100.0 3.2E-35 1.1E-39 262.4 14.5 138 123-268 17-163 (229)
15 2ywr_A Phosphoribosylglycinami 100.0 7.2E-35 2.5E-39 257.7 14.6 133 128-268 1-142 (216)
16 1fmt_A Methionyl-tRNA FMet for 100.0 3.7E-30 1.3E-34 239.1 13.7 127 127-268 2-143 (314)
17 2bln_A Protein YFBG; transfera 100.0 3.1E-30 1.1E-34 238.7 11.2 125 129-268 1-137 (305)
18 3q0i_A Methionyl-tRNA formyltr 100.0 1.8E-29 6.3E-34 234.9 12.4 128 127-268 6-147 (318)
19 3rfo_A Methionyl-tRNA formyltr 100.0 3.5E-29 1.2E-33 232.9 14.0 130 125-268 1-144 (317)
20 3tqq_A Methionyl-tRNA formyltr 100.0 6E-29 2.1E-33 231.0 14.5 127 128-268 2-142 (314)
21 2bw0_A 10-FTHFDH, 10-formyltet 100.0 1.1E-28 3.6E-33 230.6 11.9 131 127-268 21-161 (329)
22 1z7e_A Protein aRNA; rossmann 100.0 1.4E-28 4.9E-33 245.7 12.3 125 129-268 1-137 (660)
23 1zgh_A Methionyl-tRNA formyltr 99.8 9.6E-20 3.3E-24 165.2 2.0 64 198-268 69-137 (260)
24 3p96_A Phosphoserine phosphata 99.7 9.7E-16 3.3E-20 144.8 15.2 159 40-213 10-179 (415)
25 1zpv_A ACT domain protein; str 99.5 1.5E-13 5.2E-18 103.6 11.6 77 41-121 4-80 (91)
26 2nyi_A Unknown protein; protei 99.5 5.4E-14 1.8E-18 121.5 8.3 81 37-120 88-172 (195)
27 1u8s_A Glycine cleavage system 99.4 4.6E-12 1.6E-16 108.4 14.4 75 41-120 5-79 (192)
28 1u8s_A Glycine cleavage system 99.4 2.4E-12 8.1E-17 110.2 11.8 82 37-120 88-175 (192)
29 2nyi_A Unknown protein; protei 99.4 2.9E-12 9.9E-17 110.6 10.9 76 40-120 3-82 (195)
30 2ko1_A CTR148A, GTP pyrophosph 98.5 2E-07 6.7E-12 68.8 6.5 66 40-111 3-68 (88)
31 3p96_A Phosphoserine phosphata 98.3 9.2E-06 3.1E-10 76.3 13.4 106 25-135 83-191 (415)
32 2f1f_A Acetolactate synthase i 97.9 1.5E-05 5.1E-10 67.4 6.9 72 40-113 1-72 (164)
33 2pc6_A Probable acetolactate s 97.7 7.3E-05 2.5E-09 63.2 6.8 72 41-114 3-74 (165)
34 2fgc_A Acetolactate synthase, 97.6 0.00019 6.5E-09 62.1 8.7 73 40-114 27-99 (193)
35 2f06_A Conserved hypothetical 97.5 0.0036 1.2E-07 50.2 14.0 63 39-109 3-65 (144)
36 1y7p_A Hypothetical protein AF 97.4 0.00019 6.4E-09 63.3 6.3 91 40-138 2-97 (223)
37 2re1_A Aspartokinase, alpha an 97.4 0.00083 2.9E-08 55.9 9.8 88 41-137 24-112 (167)
38 2dt9_A Aspartokinase; protein- 97.3 0.0035 1.2E-07 51.9 12.1 103 41-152 15-122 (167)
39 2jhe_A Transcription regulator 97.0 0.0012 4.2E-08 53.6 6.2 64 44-113 2-65 (190)
40 1ygy_A PGDH, D-3-phosphoglycer 96.5 0.0079 2.7E-07 58.8 8.8 66 40-109 452-517 (529)
41 1sc6_A PGDH, D-3-phosphoglycer 96.4 0.0098 3.4E-07 56.4 9.0 65 41-109 330-394 (404)
42 4go7_X Aspartokinase; transfer 96.2 0.016 5.6E-07 50.0 8.2 90 42-138 35-125 (200)
43 2f06_A Conserved hypothetical 96.1 0.017 5.7E-07 46.3 7.7 57 44-108 74-130 (144)
44 3s1t_A Aspartokinase; ACT doma 95.9 0.21 7.1E-06 42.0 13.6 88 43-138 17-106 (181)
45 2dtj_A Aspartokinase; protein- 95.7 0.15 5.3E-06 42.5 12.1 106 42-155 15-125 (178)
46 4gmf_A Yersiniabactin biosynth 95.1 0.015 5.1E-07 54.5 4.3 71 124-211 3-73 (372)
47 2re1_A Aspartokinase, alpha an 94.8 0.097 3.3E-06 43.1 8.1 62 41-115 102-166 (167)
48 3k5p_A D-3-phosphoglycerate de 94.2 0.12 4E-06 49.4 8.0 65 11-77 314-378 (416)
49 3mtj_A Homoserine dehydrogenas 93.8 0.13 4.4E-06 49.4 7.6 70 38-111 355-425 (444)
50 2dt9_A Aspartokinase; protein- 93.6 0.21 7.2E-06 41.0 7.5 62 41-115 94-158 (167)
51 2dtj_A Aspartokinase; protein- 93.6 0.12 4.1E-06 43.2 6.0 62 41-115 94-158 (178)
52 3ab4_A Aspartokinase; aspartat 93.0 1.7 5.8E-05 40.9 13.7 86 43-137 265-353 (421)
53 3mwb_A Prephenate dehydratase; 92.4 0.89 3E-05 41.7 10.6 72 39-113 198-271 (313)
54 4go7_X Aspartokinase; transfer 91.6 0.26 8.9E-06 42.4 5.6 63 41-116 114-179 (200)
55 2qmx_A Prephenate dehydratase; 91.5 0.93 3.2E-05 41.0 9.5 69 42-113 200-269 (283)
56 3rjz_A N-type ATP pyrophosphat 90.5 0.78 2.7E-05 40.4 7.8 79 128-210 4-96 (237)
57 3l76_A Aspartokinase; alloster 90.3 6.1 0.00021 39.1 14.8 128 44-182 272-418 (600)
58 4had_A Probable oxidoreductase 90.2 0.59 2E-05 42.1 6.9 71 125-212 20-94 (350)
59 3l76_A Aspartokinase; alloster 90.1 0.57 1.9E-05 46.5 7.3 92 41-138 443-537 (600)
60 2qmw_A PDT, prephenate dehydra 90.1 1.3 4.5E-05 39.7 9.1 68 42-113 186-257 (267)
61 3luy_A Probable chorismate mut 89.9 1.7 5.7E-05 40.2 9.8 68 43-113 208-277 (329)
62 3s1t_A Aspartokinase; ACT doma 89.7 0.58 2E-05 39.2 6.0 62 41-115 95-159 (181)
63 4fb5_A Probable oxidoreductase 88.1 0.92 3.1E-05 40.9 6.7 72 127-212 24-102 (393)
64 3q2i_A Dehydrogenase; rossmann 87.2 1 3.6E-05 40.7 6.4 71 125-213 10-84 (354)
65 3t38_A Arsenate reductase; low 85.9 5.1 0.00017 34.6 9.8 126 103-251 64-193 (213)
66 1nvm_B Acetaldehyde dehydrogen 85.3 2.1 7.3E-05 38.7 7.5 74 127-212 3-79 (312)
67 3ohs_X Trans-1,2-dihydrobenzen 85.1 1.7 5.9E-05 38.9 6.7 70 128-212 2-74 (334)
68 3ec7_A Putative dehydrogenase; 85.1 1.9 6.6E-05 39.1 7.1 70 127-212 22-95 (357)
69 4gqa_A NAD binding oxidoreduct 84.8 1.6 5.6E-05 40.2 6.6 75 125-212 23-104 (412)
70 3fwz_A Inner membrane protein 83.7 3.6 0.00012 31.9 7.3 72 125-211 4-78 (140)
71 3ip3_A Oxidoreductase, putativ 83.0 4 0.00014 36.5 8.2 72 128-212 2-75 (337)
72 3dty_A Oxidoreductase, GFO/IDH 82.9 3.9 0.00013 37.6 8.3 72 127-212 11-93 (398)
73 3moi_A Probable dehydrogenase; 82.7 1.9 6.4E-05 39.6 6.0 68 127-213 1-73 (387)
74 3u3x_A Oxidoreductase; structu 82.7 4.2 0.00014 37.0 8.3 70 127-212 25-96 (361)
75 3e9m_A Oxidoreductase, GFO/IDH 82.6 3.3 0.00011 37.0 7.5 69 127-213 4-76 (330)
76 2i6u_A Otcase, ornithine carba 82.3 8.5 0.00029 35.0 10.1 103 127-248 147-274 (307)
77 3cea_A MYO-inositol 2-dehydrog 81.9 5.7 0.00019 35.3 8.8 70 126-212 6-79 (346)
78 3mz0_A Inositol 2-dehydrogenas 81.6 4.6 0.00016 36.2 8.1 69 128-212 2-74 (344)
79 1rwu_A Hypothetical UPF0250 pr 81.4 6.8 0.00023 30.4 7.9 69 36-112 30-102 (109)
80 3a06_A 1-deoxy-D-xylulose 5-ph 81.4 3.2 0.00011 39.0 7.0 76 129-211 4-92 (376)
81 3evn_A Oxidoreductase, GFO/IDH 80.9 2.8 9.5E-05 37.5 6.3 68 127-212 4-75 (329)
82 1zh8_A Oxidoreductase; TM0312, 80.9 3.4 0.00011 37.2 6.9 71 125-212 15-90 (340)
83 1zhv_A Hypothetical protein AT 80.8 1.3 4.4E-05 35.8 3.6 60 44-114 64-126 (134)
84 3rh0_A Arsenate reductase; oxi 80.5 8.9 0.0003 31.0 8.7 81 124-211 16-99 (148)
85 3uuw_A Putative oxidoreductase 80.0 2.9 0.0001 36.8 6.1 69 127-213 5-75 (308)
86 3rc1_A Sugar 3-ketoreductase; 79.9 2.7 9.2E-05 38.1 5.9 67 127-212 26-97 (350)
87 3euw_A MYO-inositol dehydrogen 79.9 3 0.0001 37.3 6.2 67 127-212 3-73 (344)
88 3ab4_A Aspartokinase; aspartat 79.8 5 0.00017 37.7 7.9 61 42-115 344-407 (421)
89 1phz_A Protein (phenylalanine 79.8 3.2 0.00011 39.7 6.6 67 42-112 34-101 (429)
90 3mah_A Aspartokinase; aspartat 79.6 3.5 0.00012 33.2 6.0 91 41-150 17-113 (157)
91 1pvv_A Otcase, ornithine carba 79.1 11 0.00037 34.4 9.7 102 127-248 154-280 (315)
92 4huj_A Uncharacterized protein 79.0 2.8 9.6E-05 35.3 5.4 72 128-218 23-95 (220)
93 3v5n_A Oxidoreductase; structu 78.3 2.9 9.9E-05 38.9 5.7 72 127-212 36-118 (417)
94 3db2_A Putative NADPH-dependen 77.8 3.1 0.0001 37.5 5.6 69 127-212 4-74 (354)
95 3tvi_A Aspartokinase; structur 77.8 14 0.00048 35.2 10.5 81 43-137 299-383 (446)
96 1ydw_A AX110P-like protein; st 77.7 6.4 0.00022 35.5 7.8 49 126-183 4-54 (362)
97 4h3v_A Oxidoreductase domain p 77.5 4.5 0.00015 36.2 6.6 72 128-212 6-83 (390)
98 3btv_A Galactose/lactose metab 77.5 4.7 0.00016 37.8 7.0 49 127-183 19-73 (438)
99 3ezy_A Dehydrogenase; structur 77.4 4.2 0.00015 36.4 6.4 69 128-213 2-73 (344)
100 4hkt_A Inositol 2-dehydrogenas 77.1 5.4 0.00018 35.5 7.0 66 128-212 3-71 (331)
101 4ep1_A Otcase, ornithine carba 76.7 17 0.00056 33.7 10.3 101 127-247 178-302 (340)
102 2p2s_A Putative oxidoreductase 76.5 6.5 0.00022 35.0 7.4 70 127-212 3-74 (336)
103 2nvw_A Galactose/lactose metab 76.3 8.8 0.0003 36.5 8.6 49 127-183 38-92 (479)
104 1vlv_A Otcase, ornithine carba 76.2 11 0.00038 34.6 8.9 104 127-249 166-295 (325)
105 1r0k_A 1-deoxy-D-xylulose 5-ph 75.9 7.4 0.00025 36.6 7.8 55 128-188 4-60 (388)
106 3tvi_A Aspartokinase; structur 75.6 6.8 0.00023 37.4 7.6 63 41-114 373-438 (446)
107 3c1m_A Probable aspartokinase; 75.3 6.7 0.00023 37.5 7.4 63 42-115 404-469 (473)
108 1zvp_A Hypothetical protein VC 74.6 3.4 0.00012 33.2 4.4 36 42-77 71-109 (133)
109 3c1m_A Probable aspartokinase; 74.0 5.9 0.0002 37.8 6.7 62 41-113 317-381 (473)
110 1ni5_A Putative cell cycle pro 73.8 11 0.00038 35.4 8.5 61 128-188 13-80 (433)
111 2ho3_A Oxidoreductase, GFO/IDH 73.4 7.9 0.00027 34.2 7.1 68 128-213 1-71 (325)
112 3oqb_A Oxidoreductase; structu 72.7 12 0.00041 33.9 8.2 72 126-212 4-91 (383)
113 1wy5_A TILS, hypothetical UPF0 72.6 11 0.00036 33.8 7.7 79 100-188 5-91 (317)
114 3otg_A CALG1; calicheamicin, T 72.1 11 0.00039 33.4 7.9 57 124-189 16-75 (412)
115 3gd5_A Otcase, ornithine carba 71.9 27 0.00092 32.0 10.3 101 127-247 156-281 (323)
116 3llv_A Exopolyphosphatase-rela 71.8 9.7 0.00033 29.0 6.4 70 127-211 5-77 (141)
117 3tri_A Pyrroline-5-carboxylate 71.5 6.8 0.00023 34.4 6.1 50 128-185 3-54 (280)
118 2h9z_A Hypothetical protein HP 71.4 7.9 0.00027 28.6 5.5 69 36-112 9-79 (86)
119 3rsc_A CALG2; TDP, enediyne, s 70.0 15 0.00051 32.9 8.1 56 124-188 16-74 (415)
120 3ic5_A Putative saccharopine d 69.2 22 0.00075 25.5 7.7 72 127-212 4-77 (118)
121 2ahr_A Putative pyrroline carb 68.6 5.1 0.00018 34.1 4.5 69 127-215 2-71 (259)
122 3abi_A Putative uncharacterize 68.4 13 0.00044 33.7 7.4 72 125-212 13-85 (365)
123 3nkl_A UDP-D-quinovosamine 4-d 68.0 18 0.00062 27.5 7.3 60 126-188 2-72 (141)
124 1h6d_A Precursor form of gluco 67.9 9.6 0.00033 35.6 6.6 52 126-183 81-132 (433)
125 3l4b_C TRKA K+ channel protien 67.5 5.9 0.0002 32.9 4.6 71 129-212 1-73 (218)
126 3e18_A Oxidoreductase; dehydro 67.4 9 0.00031 34.6 6.1 67 127-212 4-73 (359)
127 3oti_A CALG3; calicheamicin, T 66.8 22 0.00076 31.7 8.6 54 125-188 17-73 (398)
128 1lss_A TRK system potassium up 66.6 13 0.00046 27.6 6.1 71 128-211 4-76 (140)
129 3s2u_A UDP-N-acetylglucosamine 65.9 19 0.00065 32.4 8.0 79 128-213 2-101 (365)
130 3c85_A Putative glutathione-re 65.6 17 0.0006 28.9 7.0 71 127-211 38-112 (183)
131 4etn_A LMPTP, low molecular we 65.2 13 0.00044 31.1 6.2 82 126-214 32-120 (184)
132 2cwd_A Low molecular weight ph 64.5 19 0.00064 29.2 6.9 82 127-214 3-93 (161)
133 3oj0_A Glutr, glutamyl-tRNA re 64.4 9.5 0.00032 29.5 5.0 69 128-213 21-89 (144)
134 1jl3_A Arsenate reductase; alp 64.3 20 0.0007 28.1 7.0 91 128-228 3-98 (139)
135 3mah_A Aspartokinase; aspartat 64.3 9.3 0.00032 30.6 5.0 62 41-115 87-151 (157)
136 1tlt_A Putative oxidoreductase 64.0 18 0.00062 31.7 7.3 67 127-212 4-73 (319)
137 2glx_A 1,5-anhydro-D-fructose 63.8 12 0.0004 33.1 6.0 65 129-212 1-70 (332)
138 2cdq_A Aspartokinase; aspartat 63.5 11 0.00038 36.6 6.2 64 41-115 419-484 (510)
139 2g1u_A Hypothetical protein TM 62.6 8.3 0.00028 30.2 4.4 76 124-213 15-93 (155)
140 3l9w_A Glutathione-regulated p 61.9 16 0.00054 34.2 6.8 70 127-211 3-75 (413)
141 4fzr_A SSFS6; structural genom 61.6 31 0.0011 30.6 8.6 55 125-188 12-69 (398)
142 3okp_A GDP-mannose-dependent a 61.5 25 0.00084 30.6 7.7 79 127-212 3-94 (394)
143 3grf_A Ornithine carbamoyltran 60.6 30 0.001 31.6 8.3 102 127-247 160-291 (328)
144 1jf8_A Arsenate reductase; ptp 59.2 26 0.00087 27.3 6.6 90 128-226 3-96 (131)
145 2h78_A Hibadh, 3-hydroxyisobut 59.0 21 0.00072 31.0 6.8 65 127-212 2-67 (302)
146 3hbm_A UDP-sugar hydrolase; PS 58.3 29 0.00098 30.7 7.6 72 129-214 1-79 (282)
147 3tpf_A Otcase, ornithine carba 58.2 36 0.0012 30.8 8.3 121 97-246 124-269 (307)
148 3v7e_A Ribosome-associated pro 58.0 6.9 0.00024 28.4 2.8 41 146-188 20-60 (82)
149 3k32_A Uncharacterized protein 57.5 20 0.00068 29.8 6.1 57 128-189 6-65 (203)
150 3bio_A Oxidoreductase, GFO/IDH 57.4 8.6 0.00029 34.2 4.0 34 127-164 8-42 (304)
151 1q0q_A 1-deoxy-D-xylulose 5-ph 56.7 24 0.00083 33.4 7.0 117 124-257 5-127 (406)
152 3gt0_A Pyrroline-5-carboxylate 56.5 7.7 0.00026 33.0 3.3 70 128-215 2-74 (247)
153 2lbw_A H/ACA ribonucleoprotein 56.4 17 0.00059 28.2 5.1 49 134-188 21-70 (121)
154 1f0k_A MURG, UDP-N-acetylgluco 56.2 52 0.0018 28.4 8.9 78 129-213 7-105 (364)
155 1p8a_A Protein tyrosine phosph 55.9 24 0.00081 28.0 6.0 84 127-215 3-90 (146)
156 3keo_A Redox-sensing transcrip 55.4 41 0.0014 28.7 7.8 96 126-240 82-185 (212)
157 3m2t_A Probable dehydrogenase; 55.3 14 0.00047 33.4 5.0 68 127-212 4-76 (359)
158 2l17_A Synarsc, arsenate reduc 55.2 11 0.00036 29.7 3.7 80 128-215 4-87 (134)
159 3d1l_A Putative NADP oxidoredu 55.0 7.8 0.00027 33.1 3.2 50 127-185 9-59 (266)
160 1xea_A Oxidoreductase, GFO/IDH 54.8 12 0.00041 33.0 4.5 67 128-212 2-71 (323)
161 1duv_G Octase-1, ornithine tra 54.8 24 0.00082 32.4 6.5 74 127-213 154-233 (333)
162 2wmy_A WZB, putative acid phos 54.2 39 0.0013 26.8 7.1 80 128-215 8-92 (150)
163 1id1_A Putative potassium chan 54.1 28 0.00095 26.9 6.1 73 128-212 3-79 (153)
164 2w37_A Ornithine carbamoyltran 54.1 61 0.0021 30.1 9.2 95 97-213 155-254 (359)
165 1np3_A Ketol-acid reductoisome 53.8 29 0.00099 31.2 6.9 47 128-184 16-63 (338)
166 1u2p_A Ptpase, low molecular w 53.1 49 0.0017 26.5 7.6 81 127-214 3-92 (163)
167 3o9z_A Lipopolysaccaride biosy 52.4 28 0.00097 30.7 6.6 33 127-165 2-37 (312)
168 3ia7_A CALG4; glycosysltransfe 52.3 37 0.0013 29.7 7.3 52 128-188 4-58 (402)
169 3jvi_A Protein tyrosine phosph 52.0 41 0.0014 27.2 6.9 83 127-215 3-94 (161)
170 2cdq_A Aspartokinase; aspartat 51.9 16 0.00053 35.5 5.0 83 42-136 341-428 (510)
171 4g65_A TRK system potassium up 51.9 16 0.00053 34.7 5.0 71 127-211 2-75 (461)
172 2fhm_A Probable acylphosphatas 51.8 51 0.0017 24.1 6.9 58 101-162 16-73 (91)
173 2y1e_A 1-deoxy-D-xylulose 5-ph 51.6 35 0.0012 32.2 7.2 80 126-211 19-112 (398)
174 1dxh_A Ornithine carbamoyltran 51.4 50 0.0017 30.3 8.1 96 97-213 133-233 (335)
175 3a2k_A TRNA(Ile)-lysidine synt 51.3 21 0.00071 33.8 5.7 61 127-188 17-85 (464)
176 2fek_A Low molecular weight pr 50.9 39 0.0013 27.6 6.7 80 127-214 21-105 (167)
177 3doj_A AT3G25530, dehydrogenas 50.9 15 0.00052 32.4 4.5 67 125-212 18-85 (310)
178 3loq_A Universal stress protei 50.8 1.1E+02 0.0039 25.8 10.2 106 107-215 147-262 (294)
179 2dt5_A AT-rich DNA-binding pro 50.7 23 0.0008 30.1 5.5 37 126-166 78-115 (211)
180 3c1a_A Putative oxidoreductase 49.6 13 0.00043 32.8 3.7 38 123-165 5-44 (315)
181 1d1q_A Tyrosine phosphatase (E 49.6 49 0.0017 26.5 7.1 82 127-214 6-97 (161)
182 3h4t_A Glycosyltransferase GTF 49.6 90 0.0031 28.0 9.6 51 129-188 1-54 (404)
183 2hma_A Probable tRNA (5-methyl 49.3 19 0.00066 33.2 5.1 57 127-188 8-77 (376)
184 4etm_A LMPTP, low molecular we 48.7 44 0.0015 27.4 6.7 85 125-214 15-108 (173)
185 3ggo_A Prephenate dehydrogenas 48.7 26 0.00088 31.3 5.7 47 128-183 33-80 (314)
186 2w6k_A COBE; biosynthetic prot 48.6 38 0.0013 27.2 6.1 63 126-188 8-75 (145)
187 2pjk_A 178AA long hypothetical 48.5 26 0.00089 28.9 5.3 75 125-216 12-93 (178)
188 2r6j_A Eugenol synthase 1; phe 47.9 93 0.0032 26.6 9.1 74 128-212 11-87 (318)
189 2der_A TRNA-specific 2-thiouri 47.5 25 0.00085 32.6 5.5 58 127-189 16-86 (380)
190 1rlg_A 50S ribosomal protein L 47.2 35 0.0012 26.1 5.6 49 134-188 28-77 (119)
191 3j21_Z 50S ribosomal protein L 46.7 20 0.00069 26.6 3.9 48 134-187 16-63 (99)
192 1k92_A Argininosuccinate synth 46.5 40 0.0014 32.3 6.9 59 126-189 8-72 (455)
193 3dzc_A UDP-N-acetylglucosamine 46.1 1.4E+02 0.0049 26.9 10.4 84 126-213 23-120 (396)
194 1ulr_A Putative acylphosphatas 46.0 79 0.0027 22.9 7.1 58 101-162 16-73 (88)
195 2xzm_U Ribosomal protein L7AE 45.9 30 0.001 27.2 5.0 48 134-188 25-74 (126)
196 3e82_A Putative oxidoreductase 45.5 74 0.0025 28.5 8.3 36 126-165 5-42 (364)
197 4dll_A 2-hydroxy-3-oxopropiona 45.4 56 0.0019 28.8 7.4 65 127-212 30-95 (320)
198 2ale_A SNU13, NHP2/L7AE family 45.1 24 0.00082 28.0 4.3 49 134-188 33-82 (134)
199 1vq8_F 50S ribosomal protein L 44.9 35 0.0012 26.2 5.2 49 134-188 30-79 (120)
200 3i23_A Oxidoreductase, GFO/IDH 44.9 22 0.00074 31.8 4.6 46 128-183 2-49 (349)
201 3bl5_A Queuosine biosynthesis 44.6 58 0.002 26.5 6.9 56 128-188 3-63 (219)
202 2fc3_A 50S ribosomal protein L 44.5 38 0.0013 26.2 5.4 49 134-188 29-78 (124)
203 1v4v_A UDP-N-acetylglucosamine 44.4 1.1E+02 0.0038 26.4 9.2 83 127-213 4-100 (376)
204 1xbi_A 50S ribosomal protein L 44.3 29 0.001 26.8 4.7 49 134-188 30-79 (120)
205 2ef0_A Ornithine carbamoyltran 44.1 1.3E+02 0.0044 27.0 9.6 45 200-251 209-273 (301)
206 3qhp_A Type 1 capsular polysac 44.0 1E+02 0.0034 23.2 8.5 82 128-214 2-84 (166)
207 3n8i_A Low molecular weight ph 44.0 49 0.0017 26.6 6.2 83 127-215 4-95 (157)
208 2wja_A Putative acid phosphata 43.9 43 0.0015 27.3 5.9 79 128-214 26-109 (168)
209 3tsa_A SPNG, NDP-rhamnosyltran 43.7 49 0.0017 29.1 6.7 51 128-187 1-54 (391)
210 3ruf_A WBGU; rossmann fold, UD 43.1 1.1E+02 0.0038 26.3 8.9 75 128-213 25-109 (351)
211 1ml4_A Aspartate transcarbamoy 42.8 1.6E+02 0.0054 26.5 10.0 94 98-213 135-230 (308)
212 2g5c_A Prephenate dehydrogenas 42.3 35 0.0012 29.1 5.4 47 128-183 1-48 (281)
213 3o85_A Ribosomal protein L7AE; 42.1 37 0.0013 26.4 4.9 49 134-188 32-81 (122)
214 3v7q_A Probable ribosomal prot 41.4 21 0.00071 26.7 3.3 49 134-188 20-68 (101)
215 3au8_A 1-deoxy-D-xylulose 5-ph 41.3 89 0.003 30.2 8.3 60 125-188 74-136 (488)
216 3jyw_G 60S ribosomal protein L 41.1 35 0.0012 26.4 4.6 42 145-190 33-77 (113)
217 3iz5_f 60S ribosomal protein L 41.0 21 0.00071 27.5 3.3 49 134-188 27-75 (112)
218 3olq_A Universal stress protei 40.9 92 0.0032 26.5 7.9 41 173-215 233-277 (319)
219 3oa2_A WBPB; oxidoreductase, s 40.9 48 0.0017 29.3 6.2 33 127-165 2-37 (318)
220 1yb4_A Tartronic semialdehyde 40.8 26 0.00088 30.1 4.3 17 128-144 3-20 (295)
221 2ixa_A Alpha-N-acetylgalactosa 40.3 83 0.0028 29.1 8.0 73 127-212 19-99 (444)
222 1zq6_A Otcase, ornithine carba 39.8 92 0.0031 28.8 8.0 32 175-214 244-275 (359)
223 3lm8_A Thiamine pyrophosphokin 39.8 26 0.00089 30.1 4.0 55 158-213 45-102 (222)
224 1vpd_A Tartronate semialdehyde 39.5 52 0.0018 28.2 6.1 64 129-213 6-70 (299)
225 3on1_A BH2414 protein; structu 39.5 18 0.00062 27.0 2.7 49 134-188 19-67 (101)
226 2iyf_A OLED, oleandomycin glyc 39.4 1.1E+02 0.0038 27.2 8.5 52 128-188 7-61 (430)
227 2czc_A Glyceraldehyde-3-phosph 39.2 69 0.0024 28.7 7.0 50 128-185 2-52 (334)
228 1b7g_O Protein (glyceraldehyde 39.2 1.5E+02 0.0051 26.7 9.3 51 128-186 1-52 (340)
229 3p52_A NH(3)-dependent NAD(+) 38.7 1.2E+02 0.0042 26.0 8.3 80 97-189 4-88 (249)
230 2vsy_A XCC0866; transferase, g 38.3 2.3E+02 0.0079 26.1 10.8 79 125-211 202-289 (568)
231 4egs_A Ribose 5-phosphate isom 38.2 46 0.0016 27.4 5.3 84 125-213 31-121 (180)
232 3dhn_A NAD-dependent epimerase 38.2 52 0.0018 26.5 5.6 70 127-212 3-75 (227)
233 3r6d_A NAD-dependent epimerase 38.1 57 0.002 26.3 5.8 74 127-212 3-81 (221)
234 3by5_A Cobalamin biosynthesis 38.0 86 0.0029 25.5 6.7 60 127-188 8-71 (155)
235 3cky_A 2-hydroxymethyl glutara 38.0 56 0.0019 28.0 6.0 17 127-143 3-20 (301)
236 2iya_A OLEI, oleandomycin glyc 38.0 1.3E+02 0.0044 26.8 8.7 53 127-188 11-66 (424)
237 1w2i_A Acylphosphatase; hydrol 37.5 84 0.0029 22.9 6.1 57 101-161 18-74 (91)
238 3g0o_A 3-hydroxyisobutyrate de 37.4 40 0.0014 29.4 5.0 47 127-184 6-53 (303)
239 3qk7_A Transcriptional regulat 37.2 86 0.003 26.4 7.0 72 99-189 25-96 (294)
240 2axq_A Saccharopine dehydrogen 37.1 71 0.0024 30.3 7.0 73 127-212 22-96 (467)
241 2aif_A Ribosomal protein L7A; 36.8 39 0.0013 26.7 4.3 47 134-188 42-91 (135)
242 1qyc_A Phenylcoumaran benzylic 36.7 1E+02 0.0035 26.0 7.4 75 128-212 4-85 (308)
243 3o74_A Fructose transport syst 36.3 1.5E+02 0.005 24.2 8.2 73 99-189 17-90 (272)
244 3pzy_A MOG; ssgcid, seattle st 36.2 36 0.0012 27.7 4.2 69 127-216 6-78 (164)
245 1x7d_A Ornithine cyclodeaminas 36.2 70 0.0024 29.1 6.6 71 127-214 128-204 (350)
246 3dtt_A NADP oxidoreductase; st 36.1 38 0.0013 28.6 4.5 20 125-144 16-36 (245)
247 3dm5_A SRP54, signal recogniti 36.0 1.8E+02 0.0061 27.5 9.6 84 129-215 100-195 (443)
248 3c1o_A Eugenol synthase; pheny 36.0 89 0.003 26.7 7.0 76 127-212 3-85 (321)
249 3trg_A Acylphosphatase; fatty 35.8 90 0.0031 23.2 6.1 59 101-163 26-84 (98)
250 4fgw_A Glycerol-3-phosphate de 35.7 18 0.00061 33.9 2.5 23 125-147 31-54 (391)
251 3qsg_A NAD-binding phosphogluc 35.6 33 0.0011 30.3 4.2 47 127-183 23-72 (312)
252 2ioj_A Hypothetical protein AF 35.4 33 0.0011 26.6 3.7 31 157-188 74-105 (139)
253 1w41_A 50S ribosomal protein L 35.3 21 0.00072 26.6 2.4 48 134-187 17-64 (101)
254 1evy_A Glycerol-3-phosphate de 34.9 45 0.0015 29.7 5.0 17 130-146 17-34 (366)
255 3beo_A UDP-N-acetylglucosamine 34.9 2.1E+02 0.0073 24.4 10.5 83 127-212 7-103 (375)
256 1bg6_A N-(1-D-carboxylethyl)-L 34.6 70 0.0024 28.0 6.2 78 128-215 4-86 (359)
257 2gas_A Isoflavone reductase; N 34.6 1.2E+02 0.0042 25.4 7.7 75 128-212 2-84 (307)
258 3gdo_A Uncharacterized oxidore 34.4 1E+02 0.0035 27.5 7.3 35 127-165 4-40 (358)
259 4f2g_A Otcase 1, ornithine car 34.0 72 0.0024 28.8 6.2 43 198-247 210-272 (309)
260 2e18_A NH(3)-dependent NAD(+) 34.0 1.5E+02 0.005 25.2 8.0 58 129-189 23-83 (257)
261 1tdj_A Biosynthetic threonine 33.9 40 0.0014 32.7 4.7 35 40-76 336-370 (514)
262 4gwg_A 6-phosphogluconate dehy 33.8 93 0.0032 29.7 7.3 71 127-212 3-76 (484)
263 3upl_A Oxidoreductase; rossman 33.7 2.2E+02 0.0075 27.0 9.8 64 97-181 5-70 (446)
264 3cpq_A 50S ribosomal protein L 33.6 26 0.00088 26.6 2.7 48 134-187 22-69 (110)
265 2f1k_A Prephenate dehydrogenas 33.5 70 0.0024 27.1 5.8 44 129-183 1-45 (279)
266 2bjd_A Acylphosphatase; hypert 33.2 1.1E+02 0.0037 22.9 6.2 59 99-161 26-84 (101)
267 1urr_A CG18505 protein; acylph 33.2 1.4E+02 0.0047 22.2 6.8 59 101-163 25-84 (102)
268 3k4h_A Putative transcriptiona 33.2 1.4E+02 0.0048 24.6 7.7 72 99-189 28-100 (292)
269 1vl2_A Argininosuccinate synth 33.0 67 0.0023 30.4 6.0 61 124-189 10-74 (421)
270 3i6i_A Putative leucoanthocyan 32.8 1.1E+02 0.0037 26.6 7.2 77 128-214 10-93 (346)
271 3pdu_A 3-hydroxyisobutyrate de 32.7 30 0.001 29.9 3.3 64 128-213 1-66 (287)
272 3nvb_A Uncharacterized protein 32.6 1.4E+02 0.0049 27.7 8.2 24 124-147 18-41 (387)
273 1sur_A PAPS reductase; assimil 32.6 56 0.0019 26.9 4.9 56 129-189 45-105 (215)
274 1qyd_A Pinoresinol-lariciresin 31.8 92 0.0031 26.3 6.4 75 128-212 4-84 (313)
275 2pg3_A Queuosine biosynthesis 31.7 80 0.0027 26.2 5.8 55 129-188 3-63 (232)
276 2pbq_A Molybdenum cofactor bio 31.4 39 0.0013 27.7 3.7 14 126-139 3-16 (178)
277 3k94_A Thiamin pyrophosphokina 31.4 26 0.0009 30.1 2.7 59 159-218 45-107 (223)
278 2ywb_A GMP synthase [glutamine 31.4 1.2E+02 0.004 28.9 7.5 56 129-189 210-270 (503)
279 1y5e_A Molybdenum cofactor bio 31.4 45 0.0015 27.0 4.0 14 126-139 11-24 (169)
280 3ecs_A Translation initiation 31.4 1.8E+02 0.0061 26.3 8.4 76 132-216 124-200 (315)
281 3kux_A Putative oxidoreductase 31.2 1.6E+02 0.0055 25.9 8.1 35 127-165 6-42 (352)
282 3ijp_A DHPR, dihydrodipicolina 31.1 23 0.00077 31.8 2.3 35 127-165 20-56 (288)
283 1rpn_A GDP-mannose 4,6-dehydra 31.1 1E+02 0.0035 26.3 6.6 80 124-212 10-94 (335)
284 2xw6_A MGS, methylglyoxal synt 30.9 57 0.002 26.0 4.4 39 144-186 65-110 (134)
285 3l6d_A Putative oxidoreductase 30.8 58 0.002 28.5 5.0 67 125-213 6-74 (306)
286 2x4g_A Nucleoside-diphosphate- 30.7 1.1E+02 0.0039 26.1 6.8 71 127-212 12-85 (342)
287 3pef_A 6-phosphogluconate dehy 30.7 43 0.0015 28.8 4.0 30 129-165 2-32 (287)
288 3hbm_A UDP-sugar hydrolase; PS 30.6 1.3E+02 0.0045 26.3 7.3 77 127-214 156-235 (282)
289 2gi4_A Possible phosphotyrosin 30.6 1E+02 0.0036 24.5 6.1 81 129-214 2-91 (156)
290 3dqp_A Oxidoreductase YLBE; al 30.3 65 0.0022 25.9 4.9 69 129-213 1-72 (219)
291 2is8_A Molybdopterin biosynthe 30.3 45 0.0015 26.8 3.8 67 128-215 1-73 (164)
292 3hhe_A Ribose-5-phosphate isom 29.9 1.4E+02 0.0047 26.4 7.2 113 88-222 14-152 (255)
293 4ekn_B Aspartate carbamoyltran 29.9 1.8E+02 0.0062 26.1 8.2 94 98-213 131-227 (306)
294 3k96_A Glycerol-3-phosphate de 29.9 87 0.003 28.4 6.1 81 127-218 28-113 (356)
295 3f4l_A Putative oxidoreductase 29.8 30 0.001 30.8 2.9 34 128-165 2-38 (345)
296 3ktd_A Prephenate dehydrogenas 29.8 1.3E+02 0.0044 27.2 7.2 46 127-183 7-53 (341)
297 3csu_A Protein (aspartate carb 29.7 2E+02 0.0068 25.9 8.4 95 97-213 133-230 (310)
298 1vq3_A Phosphoribosylformylgly 29.7 1.7E+02 0.0058 21.8 6.7 61 40-113 15-80 (94)
299 1pgj_A 6PGDH, 6-PGDH, 6-phosph 29.6 62 0.0021 30.6 5.2 70 129-213 2-77 (478)
300 3kjx_A Transcriptional regulat 29.6 1.8E+02 0.0062 25.0 8.0 39 100-138 39-78 (344)
301 1vgv_A UDP-N-acetylglucosamine 29.5 1.6E+02 0.0055 25.4 7.7 81 129-213 1-95 (384)
302 3slg_A PBGP3 protein; structur 29.3 80 0.0027 27.6 5.6 71 128-210 24-97 (372)
303 4eez_A Alcohol dehydrogenase 1 29.3 1.6E+02 0.0056 25.5 7.7 74 126-210 162-238 (348)
304 2vt3_A REX, redox-sensing tran 29.2 13 0.00045 31.8 0.4 69 127-212 84-153 (215)
305 3b1f_A Putative prephenate deh 29.1 62 0.0021 27.7 4.7 47 128-183 6-53 (290)
306 3hdj_A Probable ornithine cycl 28.8 1.2E+02 0.004 27.1 6.7 132 79-246 86-223 (313)
307 1pl8_A Human sorbitol dehydrog 28.8 1.4E+02 0.0047 26.4 7.2 105 90-212 140-250 (356)
308 3e8x_A Putative NAD-dependent 28.8 60 0.0021 26.5 4.5 68 128-212 21-92 (236)
309 8abp_A L-arabinose-binding pro 28.7 1.5E+02 0.0051 24.7 7.1 72 99-188 17-89 (306)
310 2l82_A Designed protein OR32; 28.7 1.3E+02 0.0045 23.6 6.0 79 130-211 3-84 (162)
311 2hmt_A YUAA protein; RCK, KTN, 28.4 69 0.0023 23.5 4.4 72 128-213 6-79 (144)
312 2wm3_A NMRA-like family domain 28.4 2.6E+02 0.0089 23.4 9.2 73 128-212 5-80 (299)
313 1xng_A NH(3)-dependent NAD(+) 28.2 1.7E+02 0.006 25.0 7.6 57 128-188 25-86 (268)
314 3fr7_A Putative ketol-acid red 28.2 93 0.0032 30.4 6.2 51 129-184 55-107 (525)
315 3rpe_A MDAB, modulator of drug 28.2 1.7E+02 0.0058 24.8 7.3 22 197-218 76-97 (218)
316 3iwt_A 178AA long hypothetical 28.1 86 0.0029 25.2 5.2 72 126-214 13-91 (178)
317 1zzg_A Glucose-6-phosphate iso 28.1 41 0.0014 31.7 3.6 73 96-188 100-181 (415)
318 3c24_A Putative oxidoreductase 28.0 91 0.0031 26.6 5.7 46 128-184 11-58 (286)
319 3k9c_A Transcriptional regulat 27.9 2.3E+02 0.0079 23.5 8.2 71 99-189 26-96 (289)
320 3ot5_A UDP-N-acetylglucosamine 27.8 3E+02 0.01 24.8 9.5 83 128-213 27-123 (403)
321 2z2v_A Hypothetical protein PH 27.7 23 0.00078 32.4 1.7 73 123-212 11-85 (365)
322 2izz_A Pyrroline-5-carboxylate 27.4 62 0.0021 28.5 4.6 72 127-216 21-96 (322)
323 2lqj_A Mg2+ transport protein; 27.4 1.9E+02 0.0064 21.3 8.8 80 41-123 7-88 (94)
324 1vbk_A Hypothetical protein PH 27.3 86 0.0029 27.9 5.5 78 127-214 178-265 (307)
325 2vh7_A Acylphosphatase-1; hydr 27.3 1.6E+02 0.0056 21.6 6.3 57 101-161 22-79 (99)
326 3fhl_A Putative oxidoreductase 27.2 69 0.0024 28.6 4.9 35 127-165 4-40 (362)
327 2nz2_A Argininosuccinate synth 27.2 1.2E+02 0.004 28.4 6.6 56 128-188 5-64 (413)
328 1mkz_A Molybdenum cofactor bio 27.1 48 0.0016 27.0 3.5 14 126-139 8-21 (172)
329 4id9_A Short-chain dehydrogena 27.0 2E+02 0.0068 24.6 7.8 65 126-211 17-84 (347)
330 2gv1_A Probable acylphosphatas 27.0 1.6E+02 0.0056 21.3 6.1 56 102-161 19-75 (92)
331 3hcw_A Maltose operon transcri 26.9 2E+02 0.007 23.9 7.7 72 99-189 27-99 (295)
332 3huu_A Transcription regulator 26.9 1.8E+02 0.0062 24.4 7.4 72 99-189 42-114 (305)
333 4ggo_A Trans-2-enoyl-COA reduc 26.7 3.1E+02 0.011 25.7 9.4 88 125-215 47-152 (401)
334 2gf2_A Hibadh, 3-hydroxyisobut 26.7 89 0.003 26.6 5.3 63 129-212 1-64 (296)
335 3qha_A Putative oxidoreductase 26.6 73 0.0025 27.7 4.8 19 128-146 15-34 (296)
336 2cvz_A Dehydrogenase, 3-hydrox 26.2 1.2E+02 0.0039 25.6 6.0 19 128-146 1-20 (289)
337 2ew2_A 2-dehydropantoate 2-red 26.0 31 0.0011 29.5 2.2 19 128-146 3-22 (316)
338 3rot_A ABC sugar transporter, 25.9 2.1E+02 0.0073 23.8 7.6 71 99-188 18-93 (297)
339 2pgd_A 6-phosphogluconate dehy 25.8 1.1E+02 0.0038 28.8 6.2 68 128-212 2-74 (482)
340 1yqg_A Pyrroline-5-carboxylate 25.6 31 0.0011 29.0 2.1 48 129-185 1-49 (263)
341 1hdo_A Biliverdin IX beta redu 25.6 2E+02 0.0068 22.2 7.0 69 129-212 4-75 (206)
342 3u5e_c L32, RP73, YL38, 60S ri 25.5 26 0.00088 26.4 1.4 47 134-186 23-69 (105)
343 2uyy_A N-PAC protein; long-cha 25.5 62 0.0021 28.1 4.1 66 127-213 29-95 (316)
344 3qwb_A Probable quinone oxidor 25.5 2.2E+02 0.0074 24.7 7.8 73 127-211 148-224 (334)
345 3dlo_A Universal stress protei 25.2 1.2E+02 0.004 23.3 5.3 43 173-215 83-128 (155)
346 3m9w_A D-xylose-binding peripl 25.1 2.8E+02 0.0097 23.1 8.3 74 99-189 17-91 (313)
347 4a17_F RPL7A, 60S ribosomal pr 25.1 1.3E+02 0.0044 26.7 6.0 53 128-188 119-174 (255)
348 2aef_A Calcium-gated potassium 25.0 1.6E+02 0.0054 24.2 6.5 70 127-211 8-78 (234)
349 1gpj_A Glutamyl-tRNA reductase 25.0 63 0.0022 29.7 4.2 68 127-212 166-235 (404)
350 2i99_A MU-crystallin homolog; 24.9 1.4E+02 0.0048 26.2 6.4 70 127-213 134-205 (312)
351 3dbi_A Sugar-binding transcrip 24.9 1.7E+02 0.0056 25.1 6.8 37 101-137 33-70 (338)
352 3m2p_A UDP-N-acetylglucosamine 24.9 2.2E+02 0.0074 24.0 7.5 66 128-212 2-70 (311)
353 3gms_A Putative NADPH:quinone 24.8 1.7E+02 0.0059 25.5 7.0 73 127-211 144-220 (340)
354 3l49_A ABC sugar (ribose) tran 24.7 2.5E+02 0.0085 23.0 7.8 13 127-139 4-16 (291)
355 4a18_G RPL30; ribosome, eukary 24.7 27 0.00091 26.2 1.3 49 134-188 23-72 (104)
356 1b93_A Protein (methylglyoxal 24.5 69 0.0024 26.0 3.9 39 144-186 73-118 (152)
357 3nbm_A PTS system, lactose-spe 24.4 2.1E+02 0.007 21.5 6.4 63 126-188 4-85 (108)
358 3qy9_A DHPR, dihydrodipicolina 24.3 66 0.0023 27.8 4.0 33 128-165 3-36 (243)
359 4f3y_A DHPR, dihydrodipicolina 24.1 37 0.0013 30.0 2.4 34 128-165 7-42 (272)
360 3hn2_A 2-dehydropantoate 2-red 24.0 1.6E+02 0.0056 25.5 6.6 74 129-218 3-83 (312)
361 3dbi_A Sugar-binding transcrip 23.9 2.4E+02 0.0083 24.0 7.8 73 99-189 78-151 (338)
362 2j0w_A Lysine-sensitive aspart 23.5 28 0.00094 33.0 1.5 83 43-137 309-395 (449)
363 1e3j_A NADP(H)-dependent ketos 23.4 2.6E+02 0.009 24.4 8.0 75 126-212 167-248 (352)
364 3fpc_A NADP-dependent alcohol 23.3 67 0.0023 28.4 4.0 74 126-211 165-242 (352)
365 3jyn_A Quinone oxidoreductase; 23.3 2.2E+02 0.0076 24.6 7.4 73 127-211 140-216 (325)
366 3ff1_A Glucose-6-phosphate iso 23.0 54 0.0019 31.3 3.4 74 96-189 117-200 (446)
367 2zyd_A 6-phosphogluconate dehy 23.0 65 0.0022 30.6 4.0 70 126-212 13-86 (480)
368 3s40_A Diacylglycerol kinase; 23.0 1.7E+02 0.0057 25.6 6.5 13 126-138 6-18 (304)
369 3bzy_B ESCU; auto cleavage pro 22.8 50 0.0017 24.1 2.5 15 172-186 31-45 (83)
370 3egc_A Putative ribose operon 22.8 1.9E+02 0.0064 23.9 6.6 72 99-189 23-95 (291)
371 2zkr_f 60S ribosomal protein L 22.8 1.3E+02 0.0044 26.8 5.6 53 130-188 132-185 (266)
372 3dfz_A SIRC, precorrin-2 dehyd 22.7 1.3E+02 0.0043 25.7 5.5 68 127-212 30-99 (223)
373 3gqv_A Enoyl reductase; medium 22.7 3.6E+02 0.012 23.8 8.8 73 126-211 163-238 (371)
374 4ea9_A Perosamine N-acetyltran 22.6 94 0.0032 25.5 4.5 50 124-186 8-58 (220)
375 1vmd_A MGS, methylglyoxal synt 22.5 74 0.0025 26.7 3.8 39 144-186 89-134 (178)
376 3sm9_A Mglur3, metabotropic gl 22.5 4.5E+02 0.015 24.1 11.5 97 43-161 116-219 (479)
377 4dio_A NAD(P) transhydrogenase 22.5 1.7E+02 0.0057 27.4 6.7 136 57-212 124-283 (405)
378 3mt0_A Uncharacterized protein 22.5 2.3E+02 0.0078 23.8 7.2 41 173-215 204-248 (290)
379 3uog_A Alcohol dehydrogenase; 22.4 1.2E+02 0.0042 26.9 5.6 73 127-211 189-264 (363)
380 4f11_A Gamma-aminobutyric acid 22.3 3.3E+02 0.011 24.0 8.6 121 44-188 86-213 (433)
381 1xgk_A Nitrogen metabolite rep 22.2 2.5E+02 0.0086 24.7 7.7 71 128-210 5-79 (352)
382 1tq8_A Hypothetical protein RV 22.2 2.7E+02 0.0091 21.3 9.5 89 126-215 15-130 (163)
383 2gek_A Phosphatidylinositol ma 22.2 74 0.0025 27.7 4.0 39 125-165 17-62 (406)
384 3zzm_A Bifunctional purine bio 22.1 93 0.0032 30.4 4.8 33 40-75 10-42 (523)
385 2vns_A Metalloreductase steap3 22.0 1E+02 0.0035 25.3 4.7 16 127-142 27-43 (215)
386 4eye_A Probable oxidoreductase 22.0 3.1E+02 0.01 23.9 8.1 72 127-211 159-234 (342)
387 3l6u_A ABC-type sugar transpor 21.9 3.3E+02 0.011 22.3 9.2 74 99-189 23-97 (293)
388 2q8n_A Glucose-6-phosphate iso 21.8 63 0.0021 30.9 3.6 55 130-188 142-204 (460)
389 4dim_A Phosphoribosylglycinami 21.8 1.8E+02 0.0061 25.9 6.6 73 127-213 6-80 (403)
390 1sb8_A WBPP; epimerase, 4-epim 21.7 3.5E+02 0.012 23.1 8.4 75 128-213 27-111 (352)
391 3ew7_A LMO0794 protein; Q8Y8U8 21.7 2E+02 0.007 22.5 6.4 66 129-212 1-69 (221)
392 2hk9_A Shikimate dehydrogenase 21.6 36 0.0012 29.5 1.8 66 128-214 129-196 (275)
393 2yvq_A Carbamoyl-phosphate syn 21.6 55 0.0019 25.8 2.7 31 43-74 27-57 (143)
394 3ip1_A Alcohol dehydrogenase, 21.5 1.7E+02 0.0059 26.3 6.5 74 126-211 212-289 (404)
395 3kke_A LACI family transcripti 21.4 3.2E+02 0.011 22.8 7.9 71 99-189 30-102 (303)
396 3bbn_F Ribosomal protein S6; s 21.4 3.4E+02 0.012 22.3 8.3 67 38-107 60-150 (168)
397 1vj0_A Alcohol dehydrogenase, 21.4 1.5E+02 0.0052 26.5 6.0 75 127-212 195-275 (380)
398 3dxs_X Copper-transporting ATP 21.4 1.7E+02 0.0059 18.8 8.0 63 40-110 1-64 (74)
399 3e61_A Putative transcriptiona 21.4 2E+02 0.0068 23.5 6.4 70 99-189 23-94 (277)
400 1jx6_A LUXP protein; protein-l 21.4 3.7E+02 0.013 22.7 9.6 37 100-137 16-52 (342)
401 1smk_A Malate dehydrogenase, g 21.3 2.6E+02 0.0088 24.7 7.5 78 125-212 5-84 (326)
402 1i36_A Conserved hypothetical 21.3 92 0.0031 26.1 4.3 16 129-144 1-17 (264)
403 3e3m_A Transcriptional regulat 21.3 2.5E+02 0.0085 24.2 7.3 89 100-212 41-134 (355)
404 3jy6_A Transcriptional regulat 21.1 2.9E+02 0.01 22.5 7.5 64 125-212 4-71 (276)
405 3gpi_A NAD-dependent epimerase 21.1 1.4E+02 0.0048 24.9 5.4 66 128-212 3-71 (286)
406 3d4o_A Dipicolinate synthase s 21.1 3.4E+02 0.012 23.2 8.1 83 127-228 154-242 (293)
407 1orr_A CDP-tyvelose-2-epimeras 21.1 2.4E+02 0.0082 23.9 7.1 74 129-212 2-81 (347)
408 2dwc_A PH0318, 433AA long hypo 21.0 3E+02 0.01 24.7 8.1 73 127-215 18-92 (433)
409 3egc_A Putative ribose operon 20.8 2.6E+02 0.0088 23.0 7.1 42 173-214 30-74 (291)
410 2bon_A Lipid kinase; DAG kinas 20.6 2.8E+02 0.0094 24.4 7.5 40 173-212 49-90 (332)
411 2iz1_A 6-phosphogluconate dehy 20.6 81 0.0028 29.7 4.1 68 128-212 5-76 (474)
412 3bfj_A 1,3-propanediol oxidore 20.6 4.6E+02 0.016 23.5 9.5 84 129-218 12-106 (387)
413 1omo_A Alanine dehydrogenase; 20.6 1.3E+02 0.0043 26.8 5.3 68 127-213 124-196 (322)
414 3s2e_A Zinc-containing alcohol 20.5 2.4E+02 0.0081 24.5 7.0 74 126-211 165-239 (340)
415 1gtd_A MTH169; synthetase, FGA 20.1 2.4E+02 0.0083 20.1 5.8 60 41-113 3-66 (85)
416 2qv7_A Diacylglycerol kinase D 20.1 2.2E+02 0.0075 25.1 6.7 9 204-212 80-88 (337)
No 1
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=100.00 E-value=5.6e-58 Score=421.48 Aligned_cols=218 Identities=21% Similarity=0.352 Sum_probs=196.8
Q ss_pred CCCcceEEEEEEcCCCcChHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHhhhhhhccc
Q 024345 37 SPTLTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAM 116 (269)
Q Consensus 37 ~~~~~~~iItV~G~DrpGIVa~VS~~La~~giNI~dl~~~~~~~~g~F~m~~~v~~p~~~~~~~~L~e~L~~la~el~l~ 116 (269)
+..+.+++|||+|+||||||++||++|+++|+||++++|+.+..+|.|+|+++++.|+ +.+.++|+++|+++|++++ |
T Consensus 3 ~~~~~~~vLtv~c~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~-~~~~~~L~~~f~~la~~l~-m 80 (286)
T 3n0v_A 3 SRAPDTWILTADCPSMLGTVDVVTRYLFEQRCYVTEHHSFDDRQSGRFFIRVEFRQPD-DFDEAGFRAGLAERSEAFG-M 80 (286)
T ss_dssp ----CCEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEECCS-SCCHHHHHHHHHHHHGGGT-C
T ss_pred cccCCcEEEEEEeCCCCCHHHHHHHHHHHCCCCeeeeeeeccCCCCeeEEEEEEecCC-CCCHHHHHHHHHHHHHHcC-C
Confidence 3446789999999999999999999999999999999999767799999999999986 7889999999999999998 5
Q ss_pred eeeeeecCCCCCeeEEEEEeCCchHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCC-Cc--
Q 024345 117 RSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKE-NE-- 193 (269)
Q Consensus 117 ~~~~~~~~~~~~~riav~~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~-~~-- 193 (269)
+ |++...++|+||+||+||+||||++|+++++.|.++++|++||||++ ++ .++|+++|||+++++.+. ++
T Consensus 81 ~--~~l~~~~~~~ri~vl~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~---~~--~~~A~~~gIp~~~~~~~~~~r~~ 153 (286)
T 3n0v_A 81 A--FELTAPNHRPKVVIMVSKADHCLNDLLYRQRIGQLGMDVVAVVSNHP---DL--EPLAHWHKIPYYHFALDPKDKPG 153 (286)
T ss_dssp E--EEEECTTCCCEEEEEESSCCHHHHHHHHHHHTTSSCCEEEEEEESSS---TT--HHHHHHTTCCEEECCCBTTBHHH
T ss_pred E--EEeecCCCCcEEEEEEeCCCCCHHHHHHHHHCCCCCcEEEEEEeCcH---HH--HHHHHHcCCCEEEeCCCcCCHHH
Confidence 6 55677788999999999999999999999999999999999999994 33 577999999999988432 22
Q ss_pred hHHHHHHHhc--cCCEEEEEecceeee---cccccccccccCCCccccCCCCCCCCCcHHHHHHHcCCCeeeEEEEEecc
Q 024345 194 REEELLELVQ--NTDFLVLARYMQVNR---IRLYVAQLFSCLVTEQLTVLNSSLGGINISLSSFDATIEWISLLKFRRTF 268 (269)
Q Consensus 194 ~e~~l~~~l~--~~Dlivla~y~~il~---l~~~~~~~iN~~~~~iHpSLLP~~rG~~p~~~A~~~G~~~tG~Tvh~v~~ 268 (269)
+|+++++.++ ++|++|+|||||||+ ++.|++|+|| +||||||+|||++|++||+++|++++|+|+|+||+
T Consensus 154 ~~~~~~~~l~~~~~Dlivla~y~~il~~~~l~~~~~~~iN-----iHpSlLP~~rG~~p~~~Ai~~G~~~~G~Tvh~v~~ 228 (286)
T 3n0v_A 154 QERKVLQVIEETGAELVILARYMQVLSPELCRRLDGWAIN-----IHHSLLPGFKGAKPYHQAYNKGVKMVGATAHYINN 228 (286)
T ss_dssp HHHHHHHHHHHHTCSEEEESSCCSCCCHHHHHHTTTSEEE-----EEECSSTTCCCSCHHHHHHHHTCSEEEEEEEECCS
T ss_pred HHHHHHHHHHhcCCCEEEecccccccCHHHHhhhcCCeEE-----eccccccCCCCccHHHHHHHcCCCeEEEEEEEEcC
Confidence 3567888888 899999999999999 9999999999 99999999999999999999999999999999986
No 2
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=100.00 E-value=5e-58 Score=424.61 Aligned_cols=217 Identities=31% Similarity=0.455 Sum_probs=197.7
Q ss_pred CcceEEEEEEcCCCcChHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHhhhhhhcccee
Q 024345 39 TLTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMRS 118 (269)
Q Consensus 39 ~~~~~iItV~G~DrpGIVa~VS~~La~~giNI~dl~~~~~~~~g~F~m~~~v~~p~~~~~~~~L~e~L~~la~el~l~~~ 118 (269)
.+.+++|||+|+||||||++||++|+++|+||++++|+.++.+|.|+||++++.|+...+.++|+++|++++++++ |+
T Consensus 19 ~~~~~iLtv~c~DrpGIVa~VS~~La~~g~NI~d~~q~~d~~~g~FfMr~~~~~~~~~~~~~~L~~~l~~la~~l~-m~- 96 (302)
T 3o1l_A 19 GMRTFRLVIACPDRVGIVAKVSNFLASHNGWITEASHHSDNLSGWFFMRHEIRADTLPFDLDGFREAFTPIAEEFS-MD- 96 (302)
T ss_dssp CCCEEEEEEEEECCTTHHHHHHHHHHHTTCCEEEEEEEEETTTTEEEEEEEEEGGGSSSCHHHHHHHHHHHHHHHT-CE-
T ss_pred ccceEEEEEECCCCCCHHHHHHHHHHHCCCCEEEeeEEecCCCCeEEEEEEEecCCCCCCHHHHHHHHHHHHHHhC-Ce-
Confidence 4577999999999999999999999999999999999987789999999999988644789999999999999998 56
Q ss_pred eeeecCCCCCeeEEEEEeCCchHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCC-CCc--hH
Q 024345 119 VVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAK-ENE--RE 195 (269)
Q Consensus 119 ~~~~~~~~~~~riav~~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~-~~~--~e 195 (269)
|++...++|+||+||+||+|+||++|+++++.|.++++|++||||++ + +.++|+++|||+++++.+ .++ .|
T Consensus 97 -~~l~~~~~~~ri~vl~Sg~g~nl~~ll~~~~~g~l~~~I~~Visn~~---~--~~~~A~~~gIp~~~~~~~~~~r~~~~ 170 (302)
T 3o1l_A 97 -WRITDSAQKKRVVLMASRESHCLADLLHRWHSDELDCDIACVISNHQ---D--LRSMVEWHDIPYYHVPVDPKDKEPAF 170 (302)
T ss_dssp -EEEEETTSCCEEEEEECSCCHHHHHHHHHHHTTCSCSEEEEEEESSS---T--THHHHHTTTCCEEECCCCSSCCHHHH
T ss_pred -eeecccCCCcEEEEEEeCCchhHHHHHHHHHCCCCCcEEEEEEECcH---H--HHHHHHHcCCCEEEcCCCcCCHHHHH
Confidence 45566778999999999999999999999999999999999999994 3 468899999999998732 222 35
Q ss_pred HHHHHHhc--cCCEEEEEecceeee---cccccccccccCCCccccCCCCCCCCCcHHHHHHHcCCCeeeEEEEEecc
Q 024345 196 EELLELVQ--NTDFLVLARYMQVNR---IRLYVAQLFSCLVTEQLTVLNSSLGGINISLSSFDATIEWISLLKFRRTF 268 (269)
Q Consensus 196 ~~l~~~l~--~~Dlivla~y~~il~---l~~~~~~~iN~~~~~iHpSLLP~~rG~~p~~~A~~~G~~~tG~Tvh~v~~ 268 (269)
+++++.++ ++|++|+|||||||+ ++.|++|+|| +||||||+|||++|++||+++|+++||+|+||||+
T Consensus 171 ~~~~~~l~~~~~DliVlagym~IL~~~~l~~~~~~~IN-----iHpSlLP~frG~~p~~~Ai~~G~k~tG~TvH~v~~ 243 (302)
T 3o1l_A 171 AEVSRLVGHHQADVVVLARYMQILPPQLCREYAHQVIN-----IHHSFLPSFVGAKPYHQASLRGVKLIGATCHYVTE 243 (302)
T ss_dssp HHHHHHHHHTTCSEEEESSCCSCCCTTHHHHTTTCEEE-----EESSCTTSSCSSCHHHHHHHHTCSEEEEEEEECCS
T ss_pred HHHHHHHHHhCCCEEEHhHhhhhcCHHHHhhhhCCeEE-----eCcccccCCCCccHHHHHHHcCCCeEEEEEEEECC
Confidence 77888888 899999999999999 9999999999 99999999999999999999999999999999986
No 3
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=100.00 E-value=9.9e-58 Score=420.92 Aligned_cols=219 Identities=21% Similarity=0.370 Sum_probs=195.3
Q ss_pred CCCcceEEEEEEcCCCcChHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeC--CCCCCHHHHHHHHHhhhhhhc
Q 024345 37 SPTLTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFD--PIKWPREQMDEDFFKLSKMFN 114 (269)
Q Consensus 37 ~~~~~~~iItV~G~DrpGIVa~VS~~La~~giNI~dl~~~~~~~~g~F~m~~~v~~p--~~~~~~~~L~e~L~~la~el~ 114 (269)
+..+.+++||++|+||||||++||++|+++|+||++++|+.+..+|.|+||++++.+ +...+.++|+++|++++++++
T Consensus 5 ~~~~~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~~~~~~~~~L~~~f~~la~~~~ 84 (292)
T 3lou_A 5 PQRPHQFVLTLSCPSAAGQVAAVVGLLDRHRCYVDELTVFDDDLSARFFVRCVFHATDDADALRVDALRREFEPIAERFR 84 (292)
T ss_dssp ---CCEEEEEEEEESCSCHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEECC----CCHHHHHHHHHHHHHHHT
T ss_pred cCCCCcEEEEEEcCCCCCHHHHHHHHHHHCCCCEEeeEEEecCCCCceEEEEEEEccCcccCCCHHHHHHHHHHHHHhcC
Confidence 455678999999999999999999999999999999999977779999999999987 434689999999999999998
Q ss_pred cceeeeeecCCCCCeeEEEEEeCCchHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCC-Cc
Q 024345 115 AMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKE-NE 193 (269)
Q Consensus 115 l~~~~~~~~~~~~~~riav~~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~-~~ 193 (269)
|+ |++.+.++|+||+||+||+||||++|+++++.|+++++|++||||++ ++ .++|+++|||+++++.+. ++
T Consensus 85 -m~--~~l~~~~~~~ri~vl~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~---~~--~~~A~~~gIp~~~~~~~~~~r 156 (292)
T 3lou_A 85 -MQ--WAIHDVAARPKVLIMVSKLEHCLADLLFRWKMGELKMDIVGIVSNHP---DF--APLAAQHGLPFRHFPITADTK 156 (292)
T ss_dssp -CE--EEEEETTSCCEEEEEECSCCHHHHHHHHHHHHTSSCCEEEEEEESSS---TT--HHHHHHTTCCEEECCCCSSCH
T ss_pred -cE--EEeeccCCCCEEEEEEcCCCcCHHHHHHHHHcCCCCcEEEEEEeCcH---HH--HHHHHHcCCCEEEeCCCcCCH
Confidence 56 45566778899999999999999999999999999999999999994 44 567999999999988432 22
Q ss_pred --hHHHHHHHhc--cCCEEEEEecceeee---cccccccccccCCCccccCCCCCCCCCcHHHHHHHcCCCeeeEEEEEe
Q 024345 194 --REEELLELVQ--NTDFLVLARYMQVNR---IRLYVAQLFSCLVTEQLTVLNSSLGGINISLSSFDATIEWISLLKFRR 266 (269)
Q Consensus 194 --~e~~l~~~l~--~~Dlivla~y~~il~---l~~~~~~~iN~~~~~iHpSLLP~~rG~~p~~~A~~~G~~~tG~Tvh~v 266 (269)
+|+++++.++ ++|++|+|||||||+ ++.|++|+|| +||||||+|||++|++||+++|++++|+|+|+|
T Consensus 157 ~~~~~~~~~~l~~~~~Dlivla~y~~il~~~~l~~~~~~~iN-----iHpSlLP~~rG~~p~~~Ai~~G~~~~G~Tvh~v 231 (292)
T 3lou_A 157 AQQEAQWLDVFETSGAELVILARYMQVLSPEASARLANRAIN-----IHHSFLPGFKGAKPYHQAHARGVKLIGATAHFV 231 (292)
T ss_dssp HHHHHHHHHHHHHHTCSEEEESSCCSCCCHHHHHHTTTSEEE-----EEEECSSCCCSSCHHHHHHHHTCSEEEEEEEEC
T ss_pred HHHHHHHHHHHHHhCCCEEEecCchhhCCHHHHhhhcCCeEE-----eCCCcCcCCCCccHHHHHHHcCCCeEEEEEEEE
Confidence 3567888888 899999999999999 9999999999 999999999999999999999999999999999
Q ss_pred cc
Q 024345 267 TF 268 (269)
Q Consensus 267 ~~ 268 (269)
|+
T Consensus 232 ~~ 233 (292)
T 3lou_A 232 TD 233 (292)
T ss_dssp CS
T ss_pred cC
Confidence 86
No 4
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=100.00 E-value=1.3e-57 Score=419.54 Aligned_cols=217 Identities=26% Similarity=0.415 Sum_probs=196.7
Q ss_pred cceEEEEEEcCCCcChHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHhhhhhhccceee
Q 024345 40 LTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMRSV 119 (269)
Q Consensus 40 ~~~~iItV~G~DrpGIVa~VS~~La~~giNI~dl~~~~~~~~g~F~m~~~v~~p~~~~~~~~L~e~L~~la~el~l~~~~ 119 (269)
+.+++|||+|+||||||++||++|+++|+||++++|+.+..+|.|+|+++++.|+...+.++|+++|++++++++ |+
T Consensus 4 ~~~~iLtv~g~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~~~~~~~L~~~f~~la~~~~-m~-- 80 (288)
T 3obi_A 4 HHQYVLTLSCPDRAGIVSAVSTFLFENGQNILDAQQYNDTESGHFFMRVVFNAAAKVIPLASLRTGFGVIAAKFT-MG-- 80 (288)
T ss_dssp CCEEEEEEEEECCTTHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEESSCCCCHHHHHHHHHHHHHHTT-CE--
T ss_pred CCeEEEEEECCCCCCHHHHHHHHHHHCCCcEEeeeeeecCCCCceEEEEEEEcCCCCCCHHHHHHHHHHHHHHcC-CE--
Confidence 356999999999999999999999999999999999877789999999999998645789999999999999998 56
Q ss_pred eeecCCCCCeeEEEEEeCCchHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCC-Cc--hHH
Q 024345 120 VRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKE-NE--REE 196 (269)
Q Consensus 120 ~~~~~~~~~~riav~~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~-~~--~e~ 196 (269)
|++.+.++|+|||||+||+||||++|+++++.|+++++|++||||+|+ .+.++|+++|||+++++.+. ++ +|+
T Consensus 81 ~~l~~~~~~~ri~vl~Sg~g~nl~~ll~~~~~g~l~~~i~~Visn~p~----~~~~~A~~~gIp~~~~~~~~~~r~~~~~ 156 (288)
T 3obi_A 81 WHMRDRETRRKVMLLVSQSDHCLADILYRWRVGDLHMIPTAIVSNHPR----ETFSGFDFGDIPFYHFPVNKDTRRQQEA 156 (288)
T ss_dssp EEEEETTSCEEEEEEECSCCHHHHHHHHHHHTTSSCEEEEEEEESSCG----GGSCCTTTTTCCEEECCCCTTTHHHHHH
T ss_pred EEeeccCCCcEEEEEEcCCCCCHHHHHHHHHCCCCCeEEEEEEcCCCh----hHHHHHHHcCCCEEEeCCCcccHHHHHH
Confidence 455666789999999999999999999999999999999999999931 25688999999999988432 22 356
Q ss_pred HHHHHhc--cCCEEEEEecceeee---cccccccccccCCCccccCCCCCCCCCcHHHHHHHcCCCeeeEEEEEecc
Q 024345 197 ELLELVQ--NTDFLVLARYMQVNR---IRLYVAQLFSCLVTEQLTVLNSSLGGINISLSSFDATIEWISLLKFRRTF 268 (269)
Q Consensus 197 ~l~~~l~--~~Dlivla~y~~il~---l~~~~~~~iN~~~~~iHpSLLP~~rG~~p~~~A~~~G~~~tG~Tvh~v~~ 268 (269)
++++.++ ++|++|+|||||||+ ++.|++|+|| +||||||+|||++|++||+++|++++|+|+|+||+
T Consensus 157 ~~~~~l~~~~~Dlivlagy~~il~~~~l~~~~~~~iN-----iHpSlLP~~rG~~p~~~A~~~G~~~~G~Tvh~v~~ 228 (288)
T 3obi_A 157 AITALIAQTHTDLVVLARYMQILSDEMSARLAGRCIN-----IHHSFLPGFKGAKPYHQAFDRGVKLIGATAHYVTS 228 (288)
T ss_dssp HHHHHHHHHTCCEEEESSCCSCCCHHHHHHTTTSEEE-----EEEECSSCCCSSCHHHHHHHHTCSEEEEEEEECCS
T ss_pred HHHHHHHhcCCCEEEhhhhhhhCCHHHHhhhcCCeEE-----eCcccccCCCCchHHHHHHHcCCCEEEEEEEEECC
Confidence 7888888 899999999999999 9999999999 99999999999999999999999999999999986
No 5
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=100.00 E-value=1.1e-57 Score=419.82 Aligned_cols=215 Identities=24% Similarity=0.372 Sum_probs=193.6
Q ss_pred cceEEEEEEcCCCcChHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHhhhhhhccceee
Q 024345 40 LTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMRSV 119 (269)
Q Consensus 40 ~~~~iItV~G~DrpGIVa~VS~~La~~giNI~dl~~~~~~~~g~F~m~~~v~~p~~~~~~~~L~e~L~~la~el~l~~~~ 119 (269)
..+++|||+|+||||||++||++|+++|+||+|++|+.+..+|.|+||++++.|+ .+.++|+++|++++++++ |+
T Consensus 5 ~~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~--~~~~~L~~~f~~la~~~~-m~-- 79 (287)
T 3nrb_A 5 NNQYVLSLACQDAPGIVSEVSTFLFNNGANIVEAEQFNDEDSSKFFMRVSVEIPV--AGVNDFNSAFGKVVEKYN-AE-- 79 (287)
T ss_dssp TTEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEECCC-----CHHHHHHHHHHGGGT-CE--
T ss_pred CCeEEEEEECCCCCCHHHHHHHHHHHCCCCEEeeeeeecCCCCeEEEEEEEEcCC--CCHHHHHHHHHHHHHHcC-Ce--
Confidence 4579999999999999999999999999999999998777899999999999874 456799999999999998 56
Q ss_pred eeecCCCCCeeEEEEEeCCchHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCC-C--chHH
Q 024345 120 VRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKE-N--EREE 196 (269)
Q Consensus 120 ~~~~~~~~~~riav~~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~-~--~~e~ 196 (269)
|++.+.++|+||+||+||+||||++|+++++.|+++++|++||||++ ++ +.++|+++|||+++++.+. + .+|+
T Consensus 80 ~~l~~~~~~~ri~vl~Sg~g~nl~~ll~~~~~g~l~~~i~~Visn~~---~a-~~~~A~~~gIp~~~~~~~~~~r~~~~~ 155 (287)
T 3nrb_A 80 WWFRPRTDRKKVVIMVSKFDHCLGDLLYRHRLGELDMEVVGIISNHP---RE-ALSVSLVGDIPFHYLPVTPATKAAQES 155 (287)
T ss_dssp EEEEETTCCCEEEEEECSCCHHHHHHHHHHHHTSSCCEEEEEEESSC---GG-GCCCCCCTTSCEEECCCCGGGHHHHHH
T ss_pred eEeeccCCCcEEEEEEeCCCcCHHHHHHHHHCCCCCeEEEEEEeCCh---HH-HHHHHHHcCCCEEEEeccCcchhhHHH
Confidence 45566778999999999999999999999999999999999999994 44 7789999999999988432 2 2356
Q ss_pred HHHHHhc--cCCEEEEEecceeee---cccccccccccCCCccccCCCCCCCCCcHHHHHHHcCCCeeeEEEEEecc
Q 024345 197 ELLELVQ--NTDFLVLARYMQVNR---IRLYVAQLFSCLVTEQLTVLNSSLGGINISLSSFDATIEWISLLKFRRTF 268 (269)
Q Consensus 197 ~l~~~l~--~~Dlivla~y~~il~---l~~~~~~~iN~~~~~iHpSLLP~~rG~~p~~~A~~~G~~~tG~Tvh~v~~ 268 (269)
++++.++ ++|++|+|||||||+ ++.|++|+|| +||||||+|||++|++||+++|+++||+|+||||+
T Consensus 156 ~~~~~l~~~~~Dlivlagym~il~~~~l~~~~~~~iN-----iHpSlLP~~rG~~p~~~Ai~~G~k~tG~Tvh~v~~ 227 (287)
T 3nrb_A 156 QIKNIVTQSQADLIVLARYMQILSDDLSAFLSGRCIN-----IHHSFLPGFKGAKPYHQAHTRGVKLIGATAHFVTA 227 (287)
T ss_dssp HHHHHHHHHTCSEEEESSCCSCCCHHHHHHHTTSEEE-----EESSCTTTTCSSCHHHHHHHHTCSEEEEEEEECCS
T ss_pred HHHHHHHHhCCCEEEhhhhhhhcCHHHHhhccCCeEE-----ECcccccCCCCchHHHHHHHcCCCeEEEEEEEECC
Confidence 7888887 899999999999999 9999999999 99999999999999999999999999999999986
No 6
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=100.00 E-value=1.3e-37 Score=274.85 Aligned_cols=133 Identities=22% Similarity=0.324 Sum_probs=122.7
Q ss_pred CeeEEEEEeCCchHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCC-CCc---hHHHHHHHhc
Q 024345 128 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAK-ENE---REEELLELVQ 203 (269)
Q Consensus 128 ~~riav~~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~-~~~---~e~~l~~~l~ 203 (269)
|+|||||+||+|+||++|++++++|.++++|++||||+ ++++++++|+++|||+++++.+ ..+ +|+++++.++
T Consensus 2 m~riavl~Sg~Gsnl~ali~~~~~~~l~~eI~~Visn~---~~a~v~~~A~~~gIp~~~~~~~~~~~r~~~d~~~~~~l~ 78 (211)
T 3p9x_A 2 MKRVAIFASGSGTNAEAIIQSQKAGQLPCEVALLITDK---PGAKVVERVKVHEIPVCALDPKTYPSKEAYEIEVVQQLK 78 (211)
T ss_dssp -CEEEEECCTTCHHHHHHHHHHHTTCCSSEEEEEEESC---SSSHHHHHHHTTTCCEEECCGGGSSSHHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCchHHHHHHHHHHcCCCCcEEEEEEECC---CCcHHHHHHHHcCCCEEEeChhhcCchhhhHHHHHHHHH
Confidence 57999999999999999999999999999999999998 6789999999999999988743 222 2567888887
Q ss_pred --cCCEEEEEecceeee---cccccccccccCCCccccCCCCCCCCCcHHHHHHHcCCCeeeEEEEEecc
Q 024345 204 --NTDFLVLARYMQVNR---IRLYVAQLFSCLVTEQLTVLNSSLGGINISLSSFDATIEWISLLKFRRTF 268 (269)
Q Consensus 204 --~~Dlivla~y~~il~---l~~~~~~~iN~~~~~iHpSLLP~~rG~~p~~~A~~~G~~~tG~Tvh~v~~ 268 (269)
++|++|++|||+||+ ++.|++|+|| +||||||+|||++|++||+.+|+++||+|+|+||+
T Consensus 79 ~~~~Dliv~agy~~Il~~~~l~~~~~~~iN-----iHpSLLP~yrG~~pi~~Ai~~G~~~tGvTvh~v~~ 143 (211)
T 3p9x_A 79 EKQIDFVVLAGYMRLVGPTLLGAYEGRIVN-----IHPSLLPAFPGLHAIEQAIRANVKVTGVTIHYVDE 143 (211)
T ss_dssp HTTCCEEEESSCCSCCCHHHHHHHTTSEEE-----EESSCTTSSCSSCHHHHHHHTTCSEEEEEEEECCS
T ss_pred hcCCCEEEEeCchhhcCHHHHhhccCCeEE-----ECCccCCCCCCccHHHHHHHcCCCeEEEEEEEEcC
Confidence 899999999999999 9999999999 99999999999999999999999999999999986
No 7
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=100.00 E-value=5.8e-37 Score=271.42 Aligned_cols=134 Identities=22% Similarity=0.264 Sum_probs=122.0
Q ss_pred CCCeeEEEEEeCCchHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCC-C---chHHHHHHH
Q 024345 126 DPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKE-N---EREEELLEL 201 (269)
Q Consensus 126 ~~~~riav~~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~-~---~~e~~l~~~ 201 (269)
.+++|||||+||+|+||++|++++++| ++++|++|+||+ ++++++++|+++|||+++++.+. . .+|+++.+.
T Consensus 3 ~~~~riavl~SG~Gsnl~all~~~~~~-~~~eI~~Vis~~---~~a~~~~~A~~~gIp~~~~~~~~~~~r~~~d~~~~~~ 78 (215)
T 3tqr_A 3 REPLPIVVLISGNGTNLQAIIGAIQKG-LAIEIRAVISNR---ADAYGLKRAQQADIPTHIIPHEEFPSRTDFESTLQKT 78 (215)
T ss_dssp -CCEEEEEEESSCCHHHHHHHHHHHTT-CSEEEEEEEESC---TTCHHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHH
T ss_pred CCCcEEEEEEeCCcHHHHHHHHHHHcC-CCCEEEEEEeCC---cchHHHHHHHHcCCCEEEeCccccCchhHhHHHHHHH
Confidence 367899999999999999999999999 899999999998 67888999999999999987432 2 235778888
Q ss_pred hc--cCCEEEEEecceeee---cccccccccccCCCccccCCCCCCCCCcHHHHHHHcCCCeeeEEEEEecc
Q 024345 202 VQ--NTDFLVLARYMQVNR---IRLYVAQLFSCLVTEQLTVLNSSLGGINISLSSFDATIEWISLLKFRRTF 268 (269)
Q Consensus 202 l~--~~Dlivla~y~~il~---l~~~~~~~iN~~~~~iHpSLLP~~rG~~p~~~A~~~G~~~tG~Tvh~v~~ 268 (269)
++ ++|++|+++||+||+ ++.|++|+|| +||||||+|||++|++||+.+|+++||+|+|+||+
T Consensus 79 l~~~~~Dliv~agy~~il~~~~l~~~~~~~iN-----iHpSLLP~yrG~~pi~~Ai~~G~~~tGvTvh~v~~ 145 (215)
T 3tqr_A 79 IDHYDPKLIVLAGFMRKLGKAFVSHYSGRMIN-----IHPSLLPKYTGLNTHERALAAGETEHGVSVHYVTE 145 (215)
T ss_dssp HHTTCCSEEEESSCCSCCCHHHHHHTTTSEEE-----EESSSTTTTCSSCHHHHHHHTTCSEEEEEEEECC-
T ss_pred HHhcCCCEEEEccchhhCCHHHHhhccCCeEE-----eCcccCCCCCChhHHHHHHHcCCCeEEEEEEEEcC
Confidence 88 899999999999999 9999999999 99999999999999999999999999999999986
No 8
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=100.00 E-value=9.1e-37 Score=269.10 Aligned_cols=134 Identities=19% Similarity=0.272 Sum_probs=123.0
Q ss_pred CCeeEEEEEeCCchHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCC-Cc---hHHHHHHHh
Q 024345 127 PKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKE-NE---REEELLELV 202 (269)
Q Consensus 127 ~~~riav~~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~-~~---~e~~l~~~l 202 (269)
.|+||+||+||+|+||++|++++++|.++++|++||||+ |+++++++|+++|||+++++.+. .. +|+++.+.+
T Consensus 6 ~~~ri~vl~SG~gsnl~all~~~~~~~l~~~I~~Visn~---~~a~~l~~A~~~gIp~~~~~~~~~~~r~~~d~~~~~~l 82 (209)
T 4ds3_A 6 KRNRVVIFISGGGSNMEALIRAAQAPGFPAEIVAVFSDK---AEAGGLAKAEAAGIATQVFKRKDFASKEAHEDAILAAL 82 (209)
T ss_dssp CCEEEEEEESSCCHHHHHHHHHHTSTTCSEEEEEEEESC---TTCTHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHH
T ss_pred CCccEEEEEECCcHHHHHHHHHHHcCCCCcEEEEEEECC---cccHHHHHHHHcCCCEEEeCccccCCHHHHHHHHHHHH
Confidence 467999999999999999999999999999999999998 56788999999999999987432 22 357788888
Q ss_pred c--cCCEEEEEecceeee---cccccccccccCCCccccCCCCCCCCCcHHHHHHHcCCCeeeEEEEEecc
Q 024345 203 Q--NTDFLVLARYMQVNR---IRLYVAQLFSCLVTEQLTVLNSSLGGINISLSSFDATIEWISLLKFRRTF 268 (269)
Q Consensus 203 ~--~~Dlivla~y~~il~---l~~~~~~~iN~~~~~iHpSLLP~~rG~~p~~~A~~~G~~~tG~Tvh~v~~ 268 (269)
+ ++|++|+++||+||+ ++.|++|+|| +||||||+|||++|++||+.+|+++||+|+|+||+
T Consensus 83 ~~~~~Dliv~agy~~il~~~~l~~~~~~~iN-----iHpSLLP~yrG~~pi~~Ai~~G~~~tGvTvh~v~~ 148 (209)
T 4ds3_A 83 DVLKPDIICLAGYMRLLSGRFIAPYEGRILN-----IHPSLLPLFPGLHTHQRALDAGMKLAGCTVHLVTE 148 (209)
T ss_dssp HHHCCSEEEESSCCSCCCHHHHGGGTTCEEE-----EESSCTTSSCSSCHHHHHHHTTCSEEEEEEEECCC
T ss_pred HhcCCCEEEEeccccCcCHHHHhhccCCeEE-----ECCccccCCCChhHHHHHHHcCCCeEEEEEEEEcC
Confidence 8 899999999999999 9999999999 99999999999999999999999999999999986
No 9
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=100.00 E-value=8.6e-37 Score=270.29 Aligned_cols=135 Identities=19% Similarity=0.274 Sum_probs=121.8
Q ss_pred CCCCeeEEEEEeCCchHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhc-
Q 024345 125 IDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ- 203 (269)
Q Consensus 125 ~~~~~riav~~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~- 203 (269)
..+|+||+||+||+|+||++|++++++|.++++|++||||+ ++++++++|+++|||+++++.+.. .++++.+.++
T Consensus 5 ~~~~~ri~vl~SG~gsnl~all~~~~~~~~~~~I~~Vis~~---~~a~~l~~A~~~gIp~~~~~~~~~-~~~~~~~~L~~ 80 (215)
T 3kcq_A 5 MKKELRVGVLISGRGSNLEALAKAFSTEESSVVISCVISNN---AEARGLLIAQSYGIPTFVVKRKPL-DIEHISTVLRE 80 (215)
T ss_dssp --CCEEEEEEESSCCHHHHHHHHHTCCC-CSEEEEEEEESC---TTCTHHHHHHHTTCCEEECCBTTB-CHHHHHHHHHH
T ss_pred CCCCCEEEEEEECCcHHHHHHHHHHHcCCCCcEEEEEEeCC---cchHHHHHHHHcCCCEEEeCcccC-ChHHHHHHHHH
Confidence 35678999999999999999999999999999999999998 567789999999999999874321 2467888887
Q ss_pred -cCCEEEEEecceeee---cccccccccccCCCccccCCCCCCCCCcHHHHHHHcCCCeeeEEEEEecc
Q 024345 204 -NTDFLVLARYMQVNR---IRLYVAQLFSCLVTEQLTVLNSSLGGINISLSSFDATIEWISLLKFRRTF 268 (269)
Q Consensus 204 -~~Dlivla~y~~il~---l~~~~~~~iN~~~~~iHpSLLP~~rG~~p~~~A~~~G~~~tG~Tvh~v~~ 268 (269)
++|++|+|+||+||+ ++.|++|+|| +||||||+|||++|++||+.+|+++||+|+|+||+
T Consensus 81 ~~~Dlivlagy~~IL~~~~l~~~~~~~iN-----iHpSLLP~yrG~~pi~~Ai~~G~~~tGvTvh~v~~ 144 (215)
T 3kcq_A 81 HDVDLVCLAGFMSILPEKFVTDWHHKIIN-----IHPSLLPSFKGLNAQEQAYKAGVKIAGCTLHYVYQ 144 (215)
T ss_dssp TTCSEEEESSCCSCCCHHHHHHTTTSEEE-----EESSCTTTTCSSCHHHHHHHHTCSEEEEEEEECCS
T ss_pred hCCCEEEEeCCceEeCHHHHhhccCCeEE-----ECcccccCCCCccHHHHHHHcCCCeEEEEEEEEcC
Confidence 899999999999999 9999999999 99999999999999999999999999999999986
No 10
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=100.00 E-value=3.5e-36 Score=266.38 Aligned_cols=134 Identities=11% Similarity=0.122 Sum_probs=120.7
Q ss_pred CCCCeeEEEEEeCCchHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCC-CC---chHHHHHH
Q 024345 125 IDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAK-EN---EREEELLE 200 (269)
Q Consensus 125 ~~~~~riav~~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~-~~---~~e~~l~~ 200 (269)
...++||+||+||+|+||++|+++++. .++++|++|+||+ + ++++++|+++|||+++.+.+ .. .+|+++.+
T Consensus 9 ~~~~~ri~vl~SG~gsnl~all~~~~~-~~~~eI~~Vis~~---~-a~~~~~A~~~gIp~~~~~~~~~~~r~~~d~~~~~ 83 (215)
T 3da8_A 9 PSAPARLVVLASGTGSLLRSLLDAAVG-DYPARVVAVGVDR---E-CRAAEIAAEASVPVFTVRLADHPSRDAWDVAITA 83 (215)
T ss_dssp CCSSEEEEEEESSCCHHHHHHHHHSST-TCSEEEEEEEESS---C-CHHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHH
T ss_pred CCCCcEEEEEEeCChHHHHHHHHHHhc-cCCCeEEEEEeCC---c-hHHHHHHHHcCCCEEEeCcccccchhhhhHHHHH
Confidence 467889999999999999999999865 6788999999998 3 68999999999999998633 11 23567888
Q ss_pred Hhc--cCCEEEEEecceeee---cccccccccccCCCccccCCCCCCCCCcHHHHHHHcCCCeeeEEEEEecc
Q 024345 201 LVQ--NTDFLVLARYMQVNR---IRLYVAQLFSCLVTEQLTVLNSSLGGINISLSSFDATIEWISLLKFRRTF 268 (269)
Q Consensus 201 ~l~--~~Dlivla~y~~il~---l~~~~~~~iN~~~~~iHpSLLP~~rG~~p~~~A~~~G~~~tG~Tvh~v~~ 268 (269)
.++ ++|++|+|+||+||+ ++.|++|+|| +||||||+|||++|++||+.+|+++||+|+|+||+
T Consensus 84 ~l~~~~~Dlivlagy~~iL~~~~l~~~~~~~iN-----iHpSLLP~yrG~~pi~~Ai~~G~~~tGvTvh~v~~ 151 (215)
T 3da8_A 84 ATAAHEPDLVVSAGFMRILGPQFLSRFYGRTLN-----THPALLPAFPGTHGVADALAYGVKVTGATVHLVDA 151 (215)
T ss_dssp HHHTTCCSEEEEEECCSCCCHHHHHHHTTTEEE-----EESSCTTSSCSTTHHHHHHHHTCSEEEEEEEECCS
T ss_pred HHHhhCCCEEEEcCchhhCCHHHHhhccCCeEE-----eCcccccCCCCchHHHHHHHcCCCeEEEEEEEEcC
Confidence 887 899999999999999 9999999999 99999999999999999999999999999999986
No 11
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=100.00 E-value=6.1e-36 Score=264.12 Aligned_cols=132 Identities=20% Similarity=0.237 Sum_probs=121.2
Q ss_pred eeEEEEEeCCchHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCC-CCc---hHHHHHHHhc-
Q 024345 129 YKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAK-ENE---REEELLELVQ- 203 (269)
Q Consensus 129 ~riav~~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~-~~~---~e~~l~~~l~- 203 (269)
+||+||+||+|+||++|++++++|.++++|++|+||+ ++++++++|+++|||+++++.+ ..+ +++++.+.++
T Consensus 1 ~ri~vl~Sg~gsnl~ali~~~~~~~~~~~i~~Vis~~---~~~~~~~~A~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~~ 77 (212)
T 1jkx_A 1 MNIVVLISGNGSNLQAIIDACKTNKIKGTVRAVFSNK---ADAFGLERARQAGIATHTLIASAFDSREAYDRELIHEIDM 77 (212)
T ss_dssp CEEEEEESSCCHHHHHHHHHHHTTSSSSEEEEEEESC---TTCHHHHHHHHTTCEEEECCGGGCSSHHHHHHHHHHHHGG
T ss_pred CEEEEEEECCcHHHHHHHHHHHcCCCCceEEEEEeCC---CchHHHHHHHHcCCcEEEeCcccccchhhccHHHHHHHHh
Confidence 5999999999999999999999999899999999998 5678999999999999998633 222 2567888887
Q ss_pred -cCCEEEEEecceeee---cccccccccccCCCccccCCCCCCCCCcHHHHHHHcCCCeeeEEEEEecc
Q 024345 204 -NTDFLVLARYMQVNR---IRLYVAQLFSCLVTEQLTVLNSSLGGINISLSSFDATIEWISLLKFRRTF 268 (269)
Q Consensus 204 -~~Dlivla~y~~il~---l~~~~~~~iN~~~~~iHpSLLP~~rG~~p~~~A~~~G~~~tG~Tvh~v~~ 268 (269)
++|++|++|||+||+ ++.|++|+|| +||||||+|||++|++||+.+|+++||+|+|+||+
T Consensus 78 ~~~Dliv~agy~~il~~~~l~~~~~~~iN-----iHpSlLP~yrG~~pi~~ai~~G~~~tGvTvh~v~~ 141 (212)
T 1jkx_A 78 YAPDVVVLAGFMRILSPAFVSHYAGRLLN-----IHPSLLPKYPGLHTHRQALENGDEEHGTSVHFVTD 141 (212)
T ss_dssp GCCSEEEESSCCSCCCHHHHHHTTTSEEE-----EESSCTTSCCSSCHHHHHHHTTCSEEEEEEEECCS
T ss_pred cCCCEEEEeChhhhCCHHHHhhccCCEEE-----EccCcccCCCCccHHHHHHHcCCCceEEEEEEEcc
Confidence 899999999999999 9999999999 99999999999999999999999999999999986
No 12
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=100.00 E-value=1.1e-35 Score=262.08 Aligned_cols=132 Identities=20% Similarity=0.220 Sum_probs=120.4
Q ss_pred eeEEEEEeCCchHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCC-CCc---hHHHHHHHhc-
Q 024345 129 YKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAK-ENE---REEELLELVQ- 203 (269)
Q Consensus 129 ~riav~~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~-~~~---~e~~l~~~l~- 203 (269)
+|||||+||+|+||++|++++++|.++++|++|+||+ +++.++++|+++|||+++++.+ ..+ +++++.+.++
T Consensus 1 ~riaVl~SG~Gs~L~aLi~~~~~~~~~~~I~~Vvs~~---~~~~~~~~A~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~~ 77 (209)
T 1meo_A 1 ARVAVLISGTGSNLQALIDSTREPNSSAQIDIVISNK---AAVAGLDKAERAGIPTRVINHKLYKNRVEFDSAIDLVLEE 77 (209)
T ss_dssp CEEEEEESSSCTTHHHHHHHHHSTTCSCEEEEEEESS---TTCHHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHHHH
T ss_pred CeEEEEEECCchHHHHHHHHHhcCCCCcEEEEEEeCC---CChHHHHHHHHcCCCEEEECccccCchhhhhHHHHHHHHh
Confidence 5999999999999999999999998889999999998 5677899999999999987743 222 2467888887
Q ss_pred -cCCEEEEEecceeee---cccccccccccCCCccccCCCCCCCCCcHHHHHHHcCCCeeeEEEEEecc
Q 024345 204 -NTDFLVLARYMQVNR---IRLYVAQLFSCLVTEQLTVLNSSLGGINISLSSFDATIEWISLLKFRRTF 268 (269)
Q Consensus 204 -~~Dlivla~y~~il~---l~~~~~~~iN~~~~~iHpSLLP~~rG~~p~~~A~~~G~~~tG~Tvh~v~~ 268 (269)
++|++|+++||+||+ ++.|++|+|| +||||||+|||++|++||+.+|+++||+|+|+||+
T Consensus 78 ~~~Dliv~a~y~~il~~~~l~~~~~~~iN-----iHpSLLP~yrG~~pi~~Ai~~G~~~tGvTvh~v~~ 141 (209)
T 1meo_A 78 FSIDIVCLAGFMRILSGPFVQKWNGKMLN-----IHPSLLPSFKGSNAHEQALETGVTVTGCTVHFVAE 141 (209)
T ss_dssp TTCCEEEEESCCSCCCHHHHHHTTTSEEE-----EESSSTTSSCSSCHHHHHHHHTCSEEEEEEEECCC
T ss_pred cCCCEEEEcchhhhCCHHHHhhhcCCEEE-----EccCcCcCCCCccHHHHHHHcCCCcEEEEEEEECC
Confidence 899999999999999 9999999999 99999999999999999999999999999999986
No 13
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=100.00 E-value=3.2e-35 Score=259.35 Aligned_cols=133 Identities=19% Similarity=0.301 Sum_probs=121.7
Q ss_pred CeeEEEEEeCCchHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCC-Cc---hHHHHHHHhc
Q 024345 128 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKE-NE---REEELLELVQ 203 (269)
Q Consensus 128 ~~riav~~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~-~~---~e~~l~~~l~ 203 (269)
|+||+||+||+|+|++++++++.++.++++|++|+||+ ++++++++|+++|||+++++.+. .+ +|+++.+.++
T Consensus 3 m~ki~vl~sG~g~~~~~~l~~l~~~~l~~~I~~Vit~~---~~~~v~~~A~~~gIp~~~~~~~~~~~~~~~~~~~~~~l~ 79 (212)
T 3av3_A 3 MKRLAVFASGSGTNFQAIVDAAKRGDLPARVALLVCDR---PGAKVIERAARENVPAFVFSPKDYPSKAAFESEILRELK 79 (212)
T ss_dssp CEEEEEECCSSCHHHHHHHHHHHTTCCCEEEEEEEESS---TTCHHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHHH
T ss_pred CcEEEEEEECCcHHHHHHHHHHHhCCCCCeEEEEEeCC---CCcHHHHHHHHcCCCEEEeCcccccchhhhHHHHHHHHH
Confidence 58999999999999999999999998889999999998 56799999999999999877432 22 2567888887
Q ss_pred --cCCEEEEEecceeee---cccccccccccCCCccccCCCCCCCCCcHHHHHHHcCCCeeeEEEEEecc
Q 024345 204 --NTDFLVLARYMQVNR---IRLYVAQLFSCLVTEQLTVLNSSLGGINISLSSFDATIEWISLLKFRRTF 268 (269)
Q Consensus 204 --~~Dlivla~y~~il~---l~~~~~~~iN~~~~~iHpSLLP~~rG~~p~~~A~~~G~~~tG~Tvh~v~~ 268 (269)
++|++|+||||+||+ ++.|++|+|| +||||||+|||++|++||+++|+++||+|+|+||+
T Consensus 80 ~~~~Dliv~a~y~~il~~~~l~~~~~~~iN-----iHpSLLP~yrG~~pi~~Ai~~G~~~tGvTvh~v~~ 144 (212)
T 3av3_A 80 GRQIDWIALAGYMRLIGPTLLSAYEGKIVN-----IHPSLLPAFPGKDAIGQAYRAGVSETGVTVHYVDE 144 (212)
T ss_dssp HTTCCEEEESSCCSCCCHHHHHHTTTCEEE-----EESSCTTSSCSTTHHHHHHHHTCSEEEEEEEECCS
T ss_pred hcCCCEEEEchhhhhCCHHHHhhhcCCEEE-----EecCcCCCCCCcCHHHHHHHcCCCeEEEEEEEECC
Confidence 899999999999999 9999999999 99999999999999999999999999999999986
No 14
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=100.00 E-value=3.2e-35 Score=262.38 Aligned_cols=138 Identities=19% Similarity=0.250 Sum_probs=124.6
Q ss_pred cCCCCCeeEEEEEeCCchHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCC-Cc---hHHHH
Q 024345 123 PDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKE-NE---REEEL 198 (269)
Q Consensus 123 ~~~~~~~riav~~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~-~~---~e~~l 198 (269)
+....|+||+||+||+|+|++++++++.++.++++|++|+||+ ++++++++|+++|||+++++.+. .. +++++
T Consensus 17 ~~~~~~~rI~~l~SG~g~~~~~~l~~l~~~~~~~~I~~Vvt~~---~~~~~~~~A~~~gIp~~~~~~~~~~~r~~~~~~~ 93 (229)
T 3auf_A 17 YFQGHMIRIGVLISGSGTNLQAILDGCREGRIPGRVAVVISDR---ADAYGLERARRAGVDALHMDPAAYPSRTAFDAAL 93 (229)
T ss_dssp SCBTTCEEEEEEESSCCHHHHHHHHHHHTTSSSEEEEEEEESS---TTCHHHHHHHHTTCEEEECCGGGSSSHHHHHHHH
T ss_pred cccCCCcEEEEEEeCCcHHHHHHHHHHHhCCCCCeEEEEEcCC---CchHHHHHHHHcCCCEEEECcccccchhhccHHH
Confidence 4456779999999999999999999999888789999999998 56789999999999999877432 22 25678
Q ss_pred HHHhc--cCCEEEEEecceeee---cccccccccccCCCccccCCCCCCCCCcHHHHHHHcCCCeeeEEEEEecc
Q 024345 199 LELVQ--NTDFLVLARYMQVNR---IRLYVAQLFSCLVTEQLTVLNSSLGGINISLSSFDATIEWISLLKFRRTF 268 (269)
Q Consensus 199 ~~~l~--~~Dlivla~y~~il~---l~~~~~~~iN~~~~~iHpSLLP~~rG~~p~~~A~~~G~~~tG~Tvh~v~~ 268 (269)
++.++ ++|++|+|+||+||+ ++.|+.|+|| +||||||+|||++|++||+++|+++||||+|+||+
T Consensus 94 ~~~l~~~~~Dliv~agy~~IL~~~~l~~~~~~~iN-----iHpSLLP~yrG~~pi~~Ai~~G~~~tGvTvh~v~~ 163 (229)
T 3auf_A 94 AERLQAYGVDLVCLAGYMRLVRGPMLTAFPNRILN-----IHPSLLPAFPGLEAQRQALEHGVKVAGCTVHFVTA 163 (229)
T ss_dssp HHHHHHTTCSEEEESSCCSCCCHHHHHHSTTCEEE-----EESSCTTSSCSSCHHHHHHHHTCSEEEEEEEECCS
T ss_pred HHHHHhcCCCEEEEcChhHhCCHHHHhhccCCEEE-----EccCcCcCCCCcCHHHHHHHcCCCeEEEEEEEECC
Confidence 88887 899999999999999 9999999999 99999999999999999999999999999999986
No 15
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=100.00 E-value=7.2e-35 Score=257.69 Aligned_cols=133 Identities=17% Similarity=0.266 Sum_probs=120.8
Q ss_pred CeeEEEEEeCCchHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCC-CCc---hHHHHHHHhc
Q 024345 128 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAK-ENE---REEELLELVQ 203 (269)
Q Consensus 128 ~~riav~~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~-~~~---~e~~l~~~l~ 203 (269)
|+||+||+||+|+|++++++++.++.++++|++|+||+ +++.++++|+++|||+++++.+ ..+ +++++.+.++
T Consensus 1 m~rI~vl~SG~g~~~~~~l~~l~~~~~~~~i~~Vvs~~---~~~~~~~~A~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~ 77 (216)
T 2ywr_A 1 MLKIGVLVSGRGSNLQAIIDAIESGKVNASIELVISDN---PKAYAIERCKKHNVECKVIQRKEFPSKKEFEERMALELK 77 (216)
T ss_dssp CEEEEEEECSCCHHHHHHHHHHHTTSSCEEEEEEEESC---TTCHHHHHHHHHTCCEEECCGGGSSSHHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCcHHHHHHHHHHHhCCCCCeEEEEEeCC---CChHHHHHHHHcCCCEEEeCcccccchhhhhHHHHHHHH
Confidence 47999999999999999999998887778999999998 5678999999999999987743 222 2567888887
Q ss_pred --cCCEEEEEecceeee---cccccccccccCCCccccCCCCCCCCCcHHHHHHHcCCCeeeEEEEEecc
Q 024345 204 --NTDFLVLARYMQVNR---IRLYVAQLFSCLVTEQLTVLNSSLGGINISLSSFDATIEWISLLKFRRTF 268 (269)
Q Consensus 204 --~~Dlivla~y~~il~---l~~~~~~~iN~~~~~iHpSLLP~~rG~~p~~~A~~~G~~~tG~Tvh~v~~ 268 (269)
++|++|++|||+||+ ++.|++|+|| +||||||+|||++|++||+++|+++||+|+|+||+
T Consensus 78 ~~~~Dliv~a~y~~il~~~~l~~~~~~~iN-----iHpSLLP~yrG~~pi~~ai~~G~~~tGvTvh~v~~ 142 (216)
T 2ywr_A 78 KKGVELVVLAGFMRILSHNFLKYFPNKVIN-----IHPSLIPAFQGLHAQKQAVEFGVKFSGCTVHIVDE 142 (216)
T ss_dssp HTTCCEEEESSCCSCCCHHHHTTSTTCEEE-----EESSCTTTTCSTTHHHHHHHHTCSEEEEEEEECCS
T ss_pred hcCCCEEEEeCchhhCCHHHHhhccCCeEE-----EcCCcCcCCCCccHHHHHHHcCCCeEEEEEEEEcc
Confidence 899999999999999 9999999999 99999999999999999999999999999999986
No 16
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=99.97 E-value=3.7e-30 Score=239.11 Aligned_cols=127 Identities=18% Similarity=0.178 Sum_probs=111.7
Q ss_pred CCeeEEEEEeCC--chHHHHHHHhhhcCCCCceEEEEeeCCCCCC--------ChhHHHHHHhCCCCeEEeCCCCCchHH
Q 024345 127 PKYKVAVLASKQ--EHCLVDFLYGWQEGKLPVEITCVISNHDRGP--------NSHVIRFLERHGIPYHYLCAKENEREE 196 (269)
Q Consensus 127 ~~~riav~~Sg~--g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~--------~~~v~~~a~~~gIP~~~~~~~~~~~e~ 196 (269)
.+|||+||||++ ..||++|++. | ++|++|+|++|+ | .++++++|+++|||+++.. +. .++
T Consensus 2 ~~mrIvf~Gt~~fa~~~L~~L~~~---~---~~i~~Vvt~pd~-p~grg~~~~~~~v~~~A~~~gIpv~~~~-~~--~~~ 71 (314)
T 1fmt_A 2 ESLRIIFAGTPDFAARHLDALLSS---G---HNVVGVFTQPDR-PAGRGKKLMPSPVKVLAEEKGLPVFQPV-SL--RPQ 71 (314)
T ss_dssp CCCEEEEEECSHHHHHHHHHHHHT---T---CEEEEEECCCCB-C------CBCCHHHHHHHHTTCCEECCS-CS--CSH
T ss_pred CCCEEEEEecCHHHHHHHHHHHHC---C---CcEEEEEeCCCC-ccccccccCcCHHHHHHHHcCCcEEecC-CC--CCH
Confidence 468999999999 5999999983 4 799999999765 3 3789999999999998632 22 135
Q ss_pred HHHHHhc--cCCEEEEEecceeee---cccccccccccCCCccccCCCCCCCCCcHHHHHHHcCCCeeeEEEEEecc
Q 024345 197 ELLELVQ--NTDFLVLARYMQVNR---IRLYVAQLFSCLVTEQLTVLNSSLGGINISLSSFDATIEWISLLKFRRTF 268 (269)
Q Consensus 197 ~l~~~l~--~~Dlivla~y~~il~---l~~~~~~~iN~~~~~iHpSLLP~~rG~~p~~~A~~~G~~~tG~Tvh~v~~ 268 (269)
++.+.++ ++|++|+++||+||+ ++.|+.|+|| +||||||+|||++|++||+.+|+++||+|+|+||+
T Consensus 72 ~~~~~l~~~~~Dliv~~~y~~ilp~~il~~~~~g~iN-----iHpSLLP~yRG~~pi~~Ai~~G~~~tGvTih~~~~ 143 (314)
T 1fmt_A 72 ENQQLVAELQADVMVVVAYGLILPKAVLEMPRLGCIN-----VHGSLLPRWRGAAPIQRSLWAGDAETGVTIMQMDV 143 (314)
T ss_dssp HHHHHHHHTTCSEEEEESCCSCCCHHHHHSSTTCEEE-----EESSSTTTTBSSCHHHHHHHHTCSEEEEEEEECCS
T ss_pred HHHHHHHhcCCCEEEEeeccccCCHHHHhhccCCEEE-----EcCCcCcCCCCcCHHHHHHHcCCCceEEEEEEEcc
Confidence 6777777 999999999999999 9999999999 99999999999999999999999999999999986
No 17
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=99.96 E-value=3.1e-30 Score=238.71 Aligned_cols=125 Identities=18% Similarity=0.149 Sum_probs=109.6
Q ss_pred eeEEEEEeCC--chHHHHHHHhhhcCCCCceEEEEeeCCCCCCC-----hhHHHHHHhCCCCeEEeCCCCCchHHHHHHH
Q 024345 129 YKVAVLASKQ--EHCLVDFLYGWQEGKLPVEITCVISNHDRGPN-----SHVIRFLERHGIPYHYLCAKENEREEELLEL 201 (269)
Q Consensus 129 ~riav~~Sg~--g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~-----~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~ 201 (269)
|||+||+|++ ++||++|+++ + ++|++|+|++|+ +. ++++++|+++|||+++.+.. .++++.+.
T Consensus 1 mrivf~gt~~fa~~~L~~L~~~---~---~~i~~Vvt~~d~-~~g~~~~~~v~~~A~~~gIpv~~~~~~---~~~~~~~~ 70 (305)
T 2bln_A 1 MKTVVFAYHDMGCLGIEALLAA---G---YEISAIFTHTDN-PGEKAFYGSVARLAAERGIPVYAPDNV---NHPLWVER 70 (305)
T ss_dssp CEEEEEECHHHHHHHHHHHHHT---T---CEEEEEECCCC-------CCCCHHHHHHHHTCCEECCSCC---CSHHHHHH
T ss_pred CEEEEEEcCHHHHHHHHHHHHC---C---CcEEEEEcCCCC-CCCCcCccHHHHHHHHcCCCEECCCcC---CcHHHHHH
Confidence 6999999999 5999999984 3 799999999865 22 67999999999999986532 13456677
Q ss_pred hc--cCCEEEEEecceeee---cccccccccccCCCccccCCCCCCCCCcHHHHHHHcCCCeeeEEEEEecc
Q 024345 202 VQ--NTDFLVLARYMQVNR---IRLYVAQLFSCLVTEQLTVLNSSLGGINISLSSFDATIEWISLLKFRRTF 268 (269)
Q Consensus 202 l~--~~Dlivla~y~~il~---l~~~~~~~iN~~~~~iHpSLLP~~rG~~p~~~A~~~G~~~tG~Tvh~v~~ 268 (269)
++ ++|++|+++||+||+ ++.|+.|+|| +||||||+|||++|++||+.+|+++||+|+|+||+
T Consensus 71 l~~~~~Dliv~~~y~~ilp~~il~~~~~g~iN-----iHpSLLP~yRG~~pi~~ai~~G~~~tGvTih~~~~ 137 (305)
T 2bln_A 71 IAQLSPDVIFSFYYRHLIYDEILQLAPAGAFN-----LHGSLLPKYRGRAPLNWVLVNGETETGVTLHRMVK 137 (305)
T ss_dssp HHHTCCSEEEEESCCSCCCHHHHTTCTTCEEE-----EESSCTTTTEESCHHHHHHHTTCSEEEEEEEECCS
T ss_pred HHhcCCCEEEEeccccccCHHHHhcCcCCEEE-----ecCCcCcCCCCccHHHHHHHcCCCcEEEEEEEECC
Confidence 76 999999999999999 9999999999 99999999999999999999999999999999986
No 18
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=99.96 E-value=1.8e-29 Score=234.88 Aligned_cols=128 Identities=14% Similarity=0.088 Sum_probs=110.4
Q ss_pred CCeeEEEEEeCCc--hHHHHHHHhhhcCCCCceEEEEeeCCCCC-------CChhHHHHHHhCCCCeEEeCCCCCchHHH
Q 024345 127 PKYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRG-------PNSHVIRFLERHGIPYHYLCAKENEREEE 197 (269)
Q Consensus 127 ~~~riav~~Sg~g--~~l~~ll~~~~~g~l~~~i~~Visn~~~~-------~~~~v~~~a~~~gIP~~~~~~~~~~~e~~ 197 (269)
++|||+||||+++ .||++|+++ + ++|++|+|++|+. ..+++.++|+++|||++... +. .+++
T Consensus 6 ~~mrivf~Gt~~fa~~~L~~L~~~---~---~~v~~Vvt~pd~p~grg~~~~~~~v~~~A~~~gIpv~~~~-~~--~~~~ 76 (318)
T 3q0i_A 6 QSLRIVFAGTPDFAARHLAALLSS---E---HEIIAVYTQPERPAGRGKKLTASPVKTLALEHNVPVYQPE-NF--KSDE 76 (318)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTS---S---SEEEEEECCCC---------CCCHHHHHHHHTTCCEECCS-CS--CSHH
T ss_pred cCCEEEEEecCHHHHHHHHHHHHC---C---CcEEEEEcCCCCcccccccCCCCHHHHHHHHcCCCEEccC-cC--CCHH
Confidence 4689999999986 799999873 3 7999999998751 23789999999999998632 22 1346
Q ss_pred HHHHhc--cCCEEEEEecceeee---cccccccccccCCCccccCCCCCCCCCcHHHHHHHcCCCeeeEEEEEecc
Q 024345 198 LLELVQ--NTDFLVLARYMQVNR---IRLYVAQLFSCLVTEQLTVLNSSLGGINISLSSFDATIEWISLLKFRRTF 268 (269)
Q Consensus 198 l~~~l~--~~Dlivla~y~~il~---l~~~~~~~iN~~~~~iHpSLLP~~rG~~p~~~A~~~G~~~tG~Tvh~v~~ 268 (269)
+.+.++ ++|++|+++||+||+ ++.|+.|+|| +||||||+|||++|++||+.+|+++||+|+|+||+
T Consensus 77 ~~~~l~~~~~Dliv~~~y~~ilp~~~l~~~~~g~iN-----iHpSlLP~yRG~~pi~~Ai~~G~~~tGvTih~~~~ 147 (318)
T 3q0i_A 77 SKQQLAALNADLMVVVAYGLLLPKVVLDTPKLGCIN-----VHGSILPRWRGAAPIQRSIWAGDSETGVTIMQMDV 147 (318)
T ss_dssp HHHHHHTTCCSEEEESSCCSCCCHHHHTSSTTCEEE-----EESSSTTTTBSSCHHHHHHHHTCSEEEEEEEECCS
T ss_pred HHHHHHhcCCCEEEEeCccccCCHHHHhhCcCCEEE-----eCCccCcCCCCcCHHHHHHHcCCCeEEEEEEEEcC
Confidence 777777 899999999999999 9999999999 99999999999999999999999999999999986
No 19
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=99.96 E-value=3.5e-29 Score=232.89 Aligned_cols=130 Identities=18% Similarity=0.142 Sum_probs=112.1
Q ss_pred CCCCeeEEEEEeCCc--hHHHHHHHhhhcCCCCceEEEEeeCCCCC-------CChhHHHHHHhCCCCeEEeCCCCCchH
Q 024345 125 IDPKYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRG-------PNSHVIRFLERHGIPYHYLCAKENERE 195 (269)
Q Consensus 125 ~~~~~riav~~Sg~g--~~l~~ll~~~~~g~l~~~i~~Visn~~~~-------~~~~v~~~a~~~gIP~~~~~~~~~~~e 195 (269)
++.||||+||||+++ .+|++|++. | ++|++|+|++|+. ..+++.++|+++|||++... +.+ +
T Consensus 1 ~~~mmrIvf~Gtp~fa~~~L~~L~~~---~---~~v~~Vvt~pd~~~gRg~~l~~~pv~~~A~~~gIpv~~~~-~~~--~ 71 (317)
T 3rfo_A 1 SNAMIKVVFMGTPDFSVPVLRRLIED---G---YDVIGVVTQPDRPVGRKKVLTPTPVKVEAEKHGIPVLQPL-RIR--E 71 (317)
T ss_dssp CCTTSEEEEECCSTTHHHHHHHHHHT---T---CEEEEEECCCCCEETTTTEECCCHHHHHHHHTTCCEECCS-CTT--S
T ss_pred CCCceEEEEEeCCHHHHHHHHHHHHC---C---CcEEEEEeCCCcccCCCcccCCCHHHHHHHHcCCCEEccc-cCC--C
Confidence 357899999999997 799999873 3 7999999998761 23789999999999998632 222 2
Q ss_pred HHHHHHhc--cCCEEEEEecceeee---cccccccccccCCCccccCCCCCCCCCcHHHHHHHcCCCeeeEEEEEecc
Q 024345 196 EELLELVQ--NTDFLVLARYMQVNR---IRLYVAQLFSCLVTEQLTVLNSSLGGINISLSSFDATIEWISLLKFRRTF 268 (269)
Q Consensus 196 ~~l~~~l~--~~Dlivla~y~~il~---l~~~~~~~iN~~~~~iHpSLLP~~rG~~p~~~A~~~G~~~tG~Tvh~v~~ 268 (269)
++.++.++ ++|++|+++||+||+ ++.|+.|+|| +||||||+|||++|++||+.+|+++||+|+|+||+
T Consensus 72 ~~~~~~l~~~~~Dliv~~~y~~ilp~~~l~~~~~g~iN-----iHpSlLP~yRG~~pi~~Ai~~G~~~tGvTih~~~~ 144 (317)
T 3rfo_A 72 KDEYEKVLALEPDLIVTAAFGQIVPNEILEAPKYGCIN-----VHASLLPELRGGAPIHYAIMEGKEKTGITIMYMVE 144 (317)
T ss_dssp HHHHHHHHHHCCSEEEESSCCSCCCHHHHHSSTTCEEE-----EESSCTTSSBSSCHHHHHHHTTCSEEEEEEEECCS
T ss_pred HHHHHHHHhcCCCEEEEcCchhhCCHHHHhhCcCCEEE-----ECCccCcCCCCcCHHHHHHHcCCCceEEEEEEEcc
Confidence 34456665 999999999999999 9999999999 99999999999999999999999999999999986
No 20
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=99.96 E-value=6e-29 Score=230.99 Aligned_cols=127 Identities=16% Similarity=0.095 Sum_probs=109.9
Q ss_pred CeeEEEEEeCCc--hHHHHHHHhhhcCCCCceEEEEeeCCCCC-------CChhHHHHHHhCCCCeEEeCCCCCchHHHH
Q 024345 128 KYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRG-------PNSHVIRFLERHGIPYHYLCAKENEREEEL 198 (269)
Q Consensus 128 ~~riav~~Sg~g--~~l~~ll~~~~~g~l~~~i~~Visn~~~~-------~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l 198 (269)
+|||+||||+++ .+|++|++. | ++|++|+|++|+. ..+++.++|+++|||++... +. .++++
T Consensus 2 ~mrivf~Gtp~fa~~~L~~L~~~---~---~~v~~Vvt~pd~~~grg~~l~~~~v~~~A~~~gIpv~~~~-~~--~~~~~ 72 (314)
T 3tqq_A 2 SLKIVFAGTPQFAVPTLRALIDS---S---HRVLAVYTQPDRPSGRGQKIMESPVKEIARQNEIPIIQPF-SL--RDEVE 72 (314)
T ss_dssp CCEEEEEECSGGGHHHHHHHHHS---S---SEEEEEECCCC----------CCHHHHHHHHTTCCEECCS-CS--SSHHH
T ss_pred CcEEEEECCCHHHHHHHHHHHHC---C---CeEEEEEeCCCCccccCCccCCCHHHHHHHHcCCCEECcc-cC--CCHHH
Confidence 589999999997 789999873 4 7999999987752 24789999999999988632 22 13467
Q ss_pred HHHhc--cCCEEEEEecceeee---cccccccccccCCCccccCCCCCCCCCcHHHHHHHcCCCeeeEEEEEecc
Q 024345 199 LELVQ--NTDFLVLARYMQVNR---IRLYVAQLFSCLVTEQLTVLNSSLGGINISLSSFDATIEWISLLKFRRTF 268 (269)
Q Consensus 199 ~~~l~--~~Dlivla~y~~il~---l~~~~~~~iN~~~~~iHpSLLP~~rG~~p~~~A~~~G~~~tG~Tvh~v~~ 268 (269)
.+.++ ++|++|+++||+||+ ++.|+.|+|| +||||||+|||++|++||+.+|+++||+|+|+||+
T Consensus 73 ~~~l~~~~~Dliv~~~~~~ilp~~il~~~~~g~iN-----iHpSlLP~yRG~~pi~~Ai~~G~~~tGvTih~~~~ 142 (314)
T 3tqq_A 73 QEKLIAMNADVMVVVAYGLILPKKALNAFRLGCVN-----VHASLLPRWRGAAPIQRAILAGDRETGISIMQMNE 142 (314)
T ss_dssp HHHHHTTCCSEEEEESCCSCCCHHHHTSSTTCEEE-----EESSCTTTTBSSCHHHHHHHHTCSEEEEEEEECCS
T ss_pred HHHHHhcCCCEEEEcCcccccCHHHHhhCcCCEEE-----ecCccccCCCCccHHHHHHHcCCCeeEEEEEeeec
Confidence 77777 899999999999999 9999999999 99999999999999999999999999999999986
No 21
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=99.95 E-value=1.1e-28 Score=230.61 Aligned_cols=131 Identities=14% Similarity=0.031 Sum_probs=108.8
Q ss_pred CCeeEEEEEeCCc--hHHHHHHHhhhcCCCCceEEEEeeCCCCC-CChhHHHHHHhCCCCeEEeCCCC--CchHHHHHHH
Q 024345 127 PKYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRG-PNSHVIRFLERHGIPYHYLCAKE--NEREEELLEL 201 (269)
Q Consensus 127 ~~~riav~~Sg~g--~~l~~ll~~~~~g~l~~~i~~Visn~~~~-~~~~v~~~a~~~gIP~~~~~~~~--~~~e~~l~~~ 201 (269)
.+|||+||++++. .+|++|++. + ++|++|+|.+|+. ..+++.++|+++|||+++.+... ...++++++.
T Consensus 21 ~~mrIvf~G~~~fa~~~L~~L~~~---~---~~i~~Vvt~pd~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~~ 94 (329)
T 2bw0_A 21 QSMKIAVIGQSLFGQEVYCHLRKE---G---HEVVGVFTVPDKDGKADPLGLEAEKDGVPVFKYSRWRAKGQALPDVVAK 94 (329)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHT---T---CEEEEEEECCCCSSCCCHHHHHHHHHTCCEEECSCCEETTEECHHHHHH
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHC---C---CeEEEEEeCCCcCCCCCHHHHHHHHcCCCEEecCcccccccccHHHHHH
Confidence 3489999987654 356666552 3 7999999977651 24689999999999999976211 1224677787
Q ss_pred hc--cCCEEEEEecceeee---cccccccccccCCCccccCCCCCCCCCcHHHHHHHcCCCeeeEEEEEecc
Q 024345 202 VQ--NTDFLVLARYMQVNR---IRLYVAQLFSCLVTEQLTVLNSSLGGINISLSSFDATIEWISLLKFRRTF 268 (269)
Q Consensus 202 l~--~~Dlivla~y~~il~---l~~~~~~~iN~~~~~iHpSLLP~~rG~~p~~~A~~~G~~~tG~Tvh~v~~ 268 (269)
++ ++|++|+++||+||+ ++.|+.|+|| +||||||+|||++|++||+++|+++||+|+|+||+
T Consensus 95 l~~~~~Dliv~a~y~~ilp~~il~~~~~g~iN-----iHpSLLP~yRG~~pi~~Ai~~G~~~tGvTvh~~~~ 161 (329)
T 2bw0_A 95 YQALGAELNVLPFCSQFIPMEIISAPRHGSII-----YHPSLLPRHRGASAINWTLIHGDKKGGFSIFWADD 161 (329)
T ss_dssp HHTTCCSEEEESSCSSCCCHHHHTCSTTCEEE-----EESSCTTTTBSSCHHHHHHHTTCSEEEEEEEECCS
T ss_pred HHhcCCCEEEEeehhhhCCHHHHhhCcCCEEE-----EcCCcCcCCCCcCHHHHHHHcCCCcEEEEEEEECC
Confidence 77 899999999999999 9999999999 99999999999999999999999999999999986
No 22
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=99.95 E-value=1.4e-28 Score=245.74 Aligned_cols=125 Identities=18% Similarity=0.127 Sum_probs=110.3
Q ss_pred eeEEEEEeCC--chHHHHHHHhhhcCCCCceEEEEeeCCCCCCC-----hhHHHHHHhCCCCeEEeCCCCCchHHHHHHH
Q 024345 129 YKVAVLASKQ--EHCLVDFLYGWQEGKLPVEITCVISNHDRGPN-----SHVIRFLERHGIPYHYLCAKENEREEELLEL 201 (269)
Q Consensus 129 ~riav~~Sg~--g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~-----~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~ 201 (269)
|||+||+|++ ++||++|+++ +++|++|+||+|+ +. ++++++|+++|||+++.+.. .++++++.
T Consensus 1 ~ri~~~~s~~~~~~~l~~l~~~------~~~i~~v~t~~~~-~~~~~~~~~~~~~a~~~~ip~~~~~~~---~~~~~~~~ 70 (660)
T 1z7e_A 1 MKTVVFAYHDMGCLGIEALLAA------GYEISAIFTHTDN-PGEKAFYGSVARLAAERGIPVYAPDNV---NHPLWVER 70 (660)
T ss_dssp CEEEEEECHHHHHHHHHHHHHT------TCEEEEEECCCC---------CCHHHHHHHHTCCEECCSCT---TSHHHHHH
T ss_pred CEEEEEEeCHHHHHHHHHHHhC------CCCEEEEEeCCCC-CccCcCccHHHHHHHHcCCCEeccCCC---CcHHHHHH
Confidence 6999999999 6999999985 3799999999865 22 57999999999999986532 23456777
Q ss_pred hc--cCCEEEEEecceeee---cccccccccccCCCccccCCCCCCCCCcHHHHHHHcCCCeeeEEEEEecc
Q 024345 202 VQ--NTDFLVLARYMQVNR---IRLYVAQLFSCLVTEQLTVLNSSLGGINISLSSFDATIEWISLLKFRRTF 268 (269)
Q Consensus 202 l~--~~Dlivla~y~~il~---l~~~~~~~iN~~~~~iHpSLLP~~rG~~p~~~A~~~G~~~tG~Tvh~v~~ 268 (269)
++ ++|++|+++||+||+ ++.|+.|+|| +||||||+|||++|++||+++|+++||+|+|+||+
T Consensus 71 l~~~~~d~iv~~~~~~il~~~~l~~~~~~~iN-----iH~slLP~~rG~~p~~~ai~~g~~~~G~t~~~~~~ 137 (660)
T 1z7e_A 71 IAQLSPDVIFSFYYRHLIYDEILQLAPAGAFN-----LHGSLLPKYRGRAPLNWVLVNGETETGVTLHRMVK 137 (660)
T ss_dssp HHHHCCSEEEEESCCSCCCHHHHTTCTTCEEE-----EESSSTTTTCSSCHHHHHHHTTCSEEEEEEEECCS
T ss_pred HHhcCCCEEEEcCcccccCHHHHhcCCCCeEE-----ecCCcCCCCCCccHHHHHHHcCCCcEEEEEEEECC
Confidence 76 999999999999999 9999999999 99999999999999999999999999999999986
No 23
>1zgh_A Methionyl-tRNA formyltransferase; southeast collaboratory FO structural genomics, PSI, protein structure initiative, secsg; 2.05A {Clostridium thermocellum} SCOP: b.46.1.1 c.65.1.1
Probab=99.76 E-value=9.6e-20 Score=165.17 Aligned_cols=64 Identities=8% Similarity=0.015 Sum_probs=58.5
Q ss_pred HHHHhc--cCCEEEEEecceeee---cccccccccccCCCccccCCCCCCCCCcHHHHHHHcCCCeeeEEEEEecc
Q 024345 198 LLELVQ--NTDFLVLARYMQVNR---IRLYVAQLFSCLVTEQLTVLNSSLGGINISLSSFDATIEWISLLKFRRTF 268 (269)
Q Consensus 198 l~~~l~--~~Dlivla~y~~il~---l~~~~~~~iN~~~~~iHpSLLP~~rG~~p~~~A~~~G~~~tG~Tvh~v~~ 268 (269)
+.+.++ ++|++|+++||+||+ ++.| |+|| +||||||+|||++|++||+.+|+++||||+|+||+
T Consensus 69 ~~~~L~~~~pDliv~~~y~~ilp~~il~~~--g~iN-----iHpSLLP~yRG~~pi~~Ai~~G~~~tGvTih~~~~ 137 (260)
T 1zgh_A 69 TFEKVKLINPEYILFPHWSWIIPKEIFENF--TCVV-----FHMTDLPFGRGGSPLQNLIERGIKKTKISAIKVDG 137 (260)
T ss_dssp CHHHHHHHCCSEEEESSCCSCCCHHHHTTS--CEEE-----EESSCTTTTEESCHHHHHHHTTCCEEEEEEEECCS
T ss_pred HHHHHHhcCCCEEEEeccccccCHHHHccC--CEEE-----EeCCcCCCCCCcCHHHHHHHcCCCcEEEEEEEEcc
Confidence 344555 899999999999999 7764 7999 99999999999999999999999999999999986
No 24
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=99.66 E-value=9.7e-16 Score=144.84 Aligned_cols=159 Identities=11% Similarity=0.057 Sum_probs=110.9
Q ss_pred cceEEEEEEcCCCcChHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHhhhhhhccceee
Q 024345 40 LTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMRSV 119 (269)
Q Consensus 40 ~~~~iItV~G~DrpGIVa~VS~~La~~giNI~dl~~~~~~~~g~F~m~~~v~~p~~~~~~~~L~e~L~~la~el~l~~~~ 119 (269)
..+++|||+|+||||||++||++|+++||||+|++|+.. +|.|+|++.+++|+...+.++|+++|..++++++ |+|.
T Consensus 10 ~~~~~lt~~g~Dr~Giv~~vs~~l~~~~~nI~d~~q~~~--~~~f~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~ 86 (415)
T 3p96_A 10 KVSVLITVTGVDQPGVTATLFEVLSRHGVELLNVEQVVI--RHRLTLGVLVCCPADVADGPALRHDVEAAIRKVG-LDVS 86 (415)
T ss_dssp CEEEEEEEEEECCTTHHHHHHHHHTTTTCEEEEEEEEEE--TTEEEEEEEEEECHHHHTSHHHHHHHHHHHHHTT-CEEE
T ss_pred CCeEEEEEEcCCCCCHHHHHHHHHHHCCCCEEEeeeEEE--CCEeEEEEEEEecCCcCCHHHHHHHHHHHHHHcC-eEEE
Confidence 468999999999999999999999999999999999865 7999999999998522256899999999999998 5665
Q ss_pred eeecCCC-----CCeeEE-EEEeC-CchHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCC
Q 024345 120 VRVPDID-----PKYKVA-VLASK-QEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKEN 192 (269)
Q Consensus 120 ~~~~~~~-----~~~ria-v~~Sg-~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~ 192 (269)
++..... ....+. +++-. .+..+.++...+.+..++++-..-+++.+ ..+++++.--.+.+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~llg~~~~~~~~~~i~~~l~~~~~Ni~~l~~~~~~~------------~~~~~~~v~~~~~~ 154 (415)
T 3p96_A 87 IERSDDVPIIREPSTHTIFVLGRPITAAAFGAVAREVAALGVNIDLIRGVSDYP------------VIGLELRVSVPPGA 154 (415)
T ss_dssp EEECSSSCSSCCCCSEEEEEEESSCCHHHHHHHHHHHHHTTCEEEEEEEEESSS------------SEEEEEEEECCTTC
T ss_pred EEECCcccccCCCCcEEEEEEeCCCCHHHHHHHHHHHHHcCCCccceeeccCCC------------ceEEEEEeeCCCCC
Confidence 5443221 122234 44443 36888888777766665555444555431 22455443112222
Q ss_pred c--hHHHHHHHhc--cCCEEEEEec
Q 024345 193 E--REEELLELVQ--NTDFLVLARY 213 (269)
Q Consensus 193 ~--~e~~l~~~l~--~~Dlivla~y 213 (269)
. -++++.++.+ ++|++|+..-
T Consensus 155 ~~~l~~~l~~l~~~~~vD~~v~~~~ 179 (415)
T 3p96_A 155 DEALRTALNRVSSEEHVDVAVEDYT 179 (415)
T ss_dssp HHHHHHHHHHHHHHHTCEEEEEECS
T ss_pred HHHHHHHHHHHhhhcCcCccccccc
Confidence 2 1345566655 7999988763
No 25
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=99.51 E-value=1.5e-13 Score=103.60 Aligned_cols=77 Identities=23% Similarity=0.194 Sum_probs=69.2
Q ss_pred ceEEEEEEcCCCcChHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHhhhhhhccceeee
Q 024345 41 THGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMRSVV 120 (269)
Q Consensus 41 ~~~iItV~G~DrpGIVa~VS~~La~~giNI~dl~~~~~~~~g~F~m~~~v~~p~~~~~~~~L~e~L~~la~el~l~~~~~ 120 (269)
+++.|+|.|+||||++++||++|+++|+||.++++... .|.|.|++++++|+ ..+.++|.++|.+++++++ ++|..
T Consensus 4 ~~~~l~v~~~DrpGila~vt~~la~~~~NI~~i~~~~~--~~~~~~~i~v~~~~-~~~l~~l~~~L~~~~~~~~-~~~~~ 79 (91)
T 1zpv_A 4 MKAIITVVGKDKSGIVAGVSGKIAELGLNIDDISQTVL--DEYFTMMAVVSSDE-KQDFTYLRNEFEAFGQTLN-VKINI 79 (91)
T ss_dssp EEEEEEEEESCCTTHHHHHHHHHHHTTCEEEEEEEEEE--TTEEEEEEEEEESS-CCCHHHHHHHHHHHHHHHT-EEEEE
T ss_pred ceEEEEEEECCCCCHHHHHHHHHHHcCCCEEEEEeEEE--cCEEEEEEEEEeCC-CCCHHHHHHHHHHHHHHcC-CEEEE
Confidence 67999999999999999999999999999999999755 38999999999986 6789999999999999998 56644
Q ss_pred e
Q 024345 121 R 121 (269)
Q Consensus 121 ~ 121 (269)
.
T Consensus 80 ~ 80 (91)
T 1zpv_A 80 Q 80 (91)
T ss_dssp E
T ss_pred e
Confidence 3
No 26
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=99.48 E-value=5.4e-14 Score=121.48 Aligned_cols=81 Identities=19% Similarity=0.231 Sum_probs=71.1
Q ss_pred CCCcceEEEEEEcCCCcChHHHHHHHHHhCCCeEeEeeeeccC----CCCeEEEEEEEEeCCCCCCHHHHHHHHHhhhhh
Q 024345 37 SPTLTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPE----KKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKM 112 (269)
Q Consensus 37 ~~~~~~~iItV~G~DrpGIVa~VS~~La~~giNI~dl~~~~~~----~~g~F~m~~~v~~p~~~~~~~~L~e~L~~la~e 112 (269)
.....+++|+|.|+||||||++||++|+++|+||.+++++... ..+.|+|++++..|+ +.+ ++|+++|.+++++
T Consensus 88 ~~~~~~~iltv~g~DrpGiva~Vt~~La~~g~nI~~~~~~t~~~~~~~~~~F~m~~~~~~~~-~~~-~~l~~~l~~~a~~ 165 (195)
T 2nyi_A 88 SPDTREYELYVEGPDSEGIVEAVTAVLAKKGANIVELETETLPAPFAGFTLFRMGSRVAFPF-PLY-QEVVTALSRVEEE 165 (195)
T ss_dssp CTTEEEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEEECSSTTCEEEEEEEEEEEEG-GGH-HHHHHHHHHHHHH
T ss_pred CCCCcEEEEEEEeCCCcCHHHHHHHHHHHcCCCEEEceeeecccccCCCCeEEEEEEEEcCC-Ccc-HHHHHHHHHHHHH
Confidence 4556789999999999999999999999999999999998643 457999999999985 566 9999999999999
Q ss_pred hccceeee
Q 024345 113 FNAMRSVV 120 (269)
Q Consensus 113 l~l~~~~~ 120 (269)
++ |+|..
T Consensus 166 l~-~di~~ 172 (195)
T 2nyi_A 166 FG-VDIDL 172 (195)
T ss_dssp HT-CEEEE
T ss_pred cC-eEEEE
Confidence 98 57644
No 27
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=99.40 E-value=4.6e-12 Score=108.40 Aligned_cols=75 Identities=13% Similarity=0.145 Sum_probs=66.0
Q ss_pred ceEEEEEEcCCCcChHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHhhhhhhccceeee
Q 024345 41 THGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMRSVV 120 (269)
Q Consensus 41 ~~~iItV~G~DrpGIVa~VS~~La~~giNI~dl~~~~~~~~g~F~m~~~v~~p~~~~~~~~L~e~L~~la~el~l~~~~~ 120 (269)
.+++|+|.|+||||||++||++|+++|+||.+++++.. .|.|+|++.+..|. .+.++|+++|.+++++++ +.|..
T Consensus 5 ~~~~itv~~~DrpGiva~vt~~La~~g~NI~d~~~~~~--~~~f~~~~~v~~~~--~~~~~l~~~L~~~~~~~~-~~~~~ 79 (192)
T 1u8s_A 5 QHLVITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAMF--GKEFTLLMLISGSP--SNITRVETTLPLLGQQHD-LITMM 79 (192)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEE--TTEEEEEEEEEECH--HHHHHHHHHHHHHHHHHT-CEEEE
T ss_pred cEEEEEEEcCCCCcHHHHHHHHHHHCCCCEEeeeeeec--CCceEEEEEEecCC--CCHHHHHHHHHHHHHhcC-CEEEE
Confidence 36999999999999999999999999999999999864 79999999999874 367899999999999987 45543
No 28
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=99.39 E-value=2.4e-12 Score=110.21 Aligned_cols=82 Identities=15% Similarity=0.156 Sum_probs=71.2
Q ss_pred CCCcceEEEEEEcCCCcChHHHHHHHHHhCCCeEeEeeeeccC------CCCeEEEEEEEEeCCCCCCHHHHHHHHHhhh
Q 024345 37 SPTLTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPE------KKNVFYSRSEFIFDPIKWPREQMDEDFFKLS 110 (269)
Q Consensus 37 ~~~~~~~iItV~G~DrpGIVa~VS~~La~~giNI~dl~~~~~~------~~g~F~m~~~v~~p~~~~~~~~L~e~L~~la 110 (269)
......++|+|.|+||||||++||++|+++|+||.++++.... ..+.|+|++++..|+ +.+.++|+++|.+++
T Consensus 88 ~~~~~~~~l~v~~~D~~Gil~~v~~~l~~~~~nI~~~~~~t~~~~~~~~~~~~F~~~~~~~~~~-~~~~~~l~~~l~~~~ 166 (192)
T 1u8s_A 88 QTHAYTVEVYVESDDKLGLTEKFTQFFAQRQIGMASLSAQTISKDKLHSEQNQFHIAISARVDS-GCNLMQLQEEFDALC 166 (192)
T ss_dssp CCCSEEEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEEEC--------CEEEEEEEEEECT-TSCHHHHHHHHHHHH
T ss_pred ccCCceEEEEEEeCCCccHHHHHHHHHHHcCCcHHHhhhhcccCCccCCCCCEEEEEEEEeCCC-CCCHHHHHHHHHHHH
Confidence 3445789999999999999999999999999999999998543 467999999999986 778999999999999
Q ss_pred hhhccceeee
Q 024345 111 KMFNAMRSVV 120 (269)
Q Consensus 111 ~el~l~~~~~ 120 (269)
++++ |+|..
T Consensus 167 ~~~~-~~~~~ 175 (192)
T 1u8s_A 167 TALD-VQGSL 175 (192)
T ss_dssp HHHT-CEEEE
T ss_pred HHhC-ceEEE
Confidence 9999 57644
No 29
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=99.36 E-value=2.9e-12 Score=110.60 Aligned_cols=76 Identities=14% Similarity=0.092 Sum_probs=66.6
Q ss_pred cceEEEEEEcCCCcChHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCC----HHHHHHHHHhhhhhhcc
Q 024345 40 LTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWP----REQMDEDFFKLSKMFNA 115 (269)
Q Consensus 40 ~~~~iItV~G~DrpGIVa~VS~~La~~giNI~dl~~~~~~~~g~F~m~~~v~~p~~~~~----~~~L~e~L~~la~el~l 115 (269)
.++++|+|+|+||||||++||++|+++|+||.+.+++.. .|.|+|++.+..++ . + .++|+++|.+++++++
T Consensus 3 ~~~~~ltv~~~DrpGiva~vs~~La~~g~NI~da~q~~~--~~~f~m~~~v~~~~-~-~~~~~~~~l~~~L~~~~~~~~- 77 (195)
T 2nyi_A 3 TQSFVVSVAGSDRVGIVHDFSWALKNISANVESSRMACL--GGDFAMIVLVSLNA-K-DGKLIQSALESALPGFQISTR- 77 (195)
T ss_dssp CEEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEE--TTEEEEEEEEEESS-S-SSHHHHHHHHHHSTTCEEEEE-
T ss_pred ceEEEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEeEEE--CCeEEEEEEEEecC-c-cchhHHHHHHHHHHHHHHhcC-
Confidence 467999999999999999999999999999999999864 78999999999874 2 4 6889999999998888
Q ss_pred ceeee
Q 024345 116 MRSVV 120 (269)
Q Consensus 116 ~~~~~ 120 (269)
|.|.+
T Consensus 78 ~~~~~ 82 (195)
T 2nyi_A 78 RASSV 82 (195)
T ss_dssp ECCCC
T ss_pred CeEEE
Confidence 66543
No 30
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=98.50 E-value=2e-07 Score=68.82 Aligned_cols=66 Identities=14% Similarity=0.086 Sum_probs=51.2
Q ss_pred cceEEEEEEcCCCcChHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHhhhh
Q 024345 40 LTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSK 111 (269)
Q Consensus 40 ~~~~iItV~G~DrpGIVa~VS~~La~~giNI~dl~~~~~~~~g~F~m~~~v~~p~~~~~~~~L~e~L~~la~ 111 (269)
..++.|++.++||||++++|+++|+++|+||.++++... .+.+.+.+.+..++ .+.+.+.++++.+
T Consensus 3 ~~~~~l~v~~~Dr~G~L~~I~~~la~~~inI~~i~~~~~--~~~~~~~i~v~~~~----~~~l~~l~~~L~~ 68 (88)
T 2ko1_A 3 DFLAGIRIVGEDKNGMTNQITGVISKFDTNIRTIVLNAK--DGIFTCNLMIFVKN----TDKLTTLMDKLRK 68 (88)
T ss_dssp CEEEEEEEEEECCTTHHHHHHHHHTTSSSCEEEEEEEEC--SSEEEEEEEEEESS----HHHHHHHHHHHTT
T ss_pred cEEEEEEEEEECCCcHHHHHHHHHHHCCCCeEEEEEEEc--CCEEEEEEEEEECC----HHHHHHHHHHHhc
Confidence 367889999999999999999999999999999998643 33666777777763 4555555555543
No 31
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=98.27 E-value=9.2e-06 Score=76.32 Aligned_cols=106 Identities=11% Similarity=-0.002 Sum_probs=80.6
Q ss_pred ccccceecCCC-CCCCcceEEEEEEcCC-CcChHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHH
Q 024345 25 LKFPGEPIESS-VSPTLTHGIHVFHCPD-EVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQM 102 (269)
Q Consensus 25 ~~~~~~~~~~~-~~~~~~~~iItV~G~D-rpGIVa~VS~~La~~giNI~dl~~~~~~~~g~F~m~~~v~~p~~~~~~~~L 102 (269)
+++++.+.+.. ..+...++.++++|.| ++|++++|+.+++++|+||.++..... ...|.+.+.+.+|+ .+.+++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~llg~~~~~~~~~~i~~~l~~~~~Ni~~l~~~~~--~~~~~~~~~v~~~~--~~~~~l 158 (415)
T 3p96_A 83 LDVSIERSDDVPIIREPSTHTIFVLGRPITAAAFGAVAREVAALGVNIDLIRGVSD--YPVIGLELRVSVPP--GADEAL 158 (415)
T ss_dssp CEEEEEECSSSCSSCCCCSEEEEEEESSCCHHHHHHHHHHHHHTTCEEEEEEEEES--SSSEEEEEEEECCT--TCHHHH
T ss_pred eEEEEEECCcccccCCCCcEEEEEEeCCCCHHHHHHHHHHHHHcCCCccceeeccC--CCceEEEEEeeCCC--CCHHHH
Confidence 44666665443 2355679999999999 999999999999999999999988542 45666667777774 578999
Q ss_pred HHHHHhhhhhhccceeeeeecC-CCCCeeEEEEE
Q 024345 103 DEDFFKLSKMFNAMRSVVRVPD-IDPKYKVAVLA 135 (269)
Q Consensus 103 ~e~L~~la~el~l~~~~~~~~~-~~~~~riav~~ 135 (269)
+++|.++++++++ +..+.... ..+++|.++|=
T Consensus 159 ~~~l~~l~~~~~v-D~~v~~~~~~~~~~k~viFD 191 (415)
T 3p96_A 159 RTALNRVSSEEHV-DVAVEDYTLERRAKRLIVFD 191 (415)
T ss_dssp HHHHHHHHHHHTC-EEEEEECSTTTTCCCEEEEC
T ss_pred HHHHHHHhhhcCc-CcccccccccccCCcEEEEc
Confidence 9999999999986 55443332 45667877773
No 32
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=97.95 E-value=1.5e-05 Score=67.36 Aligned_cols=72 Identities=18% Similarity=0.218 Sum_probs=53.3
Q ss_pred cceEEEEEEcCCCcChHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHhhhhhh
Q 024345 40 LTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMF 113 (269)
Q Consensus 40 ~~~~iItV~G~DrpGIVa~VS~~La~~giNI~dl~~~~~~~~g~F~m~~~v~~p~~~~~~~~L~e~L~~la~el 113 (269)
|+.+.|+|...||||++++|++.|+++|+||.+++.......|...|.+.++-+ ....+++.+.|.++-+=+
T Consensus 1 ~~~~~IsV~v~NrpGvLarIt~lfs~rg~NI~Sl~v~~t~d~~~sriti~V~~d--~~~leqI~kqL~Kl~dV~ 72 (164)
T 2f1f_A 1 MARRILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTVGD--EKVLEQIEKQLHKLVDVL 72 (164)
T ss_dssp -CEEEEEEEEECCTTHHHHHHHHHHTTTCCCSEEEEEECSCSSEEEEEEEEESC--HHHHHHHHHHHHHSTTEE
T ss_pred CeEEEEEEEEeCCCcHHHHHHHHHHHCCCCeeeceeeecCCCCEEEEEEEEecc--HHHHHHHHHHHcCCCCEE
Confidence 457899999999999999999999999999999998644334666677777622 223566666666654433
No 33
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=97.67 E-value=7.3e-05 Score=63.19 Aligned_cols=72 Identities=18% Similarity=0.125 Sum_probs=54.5
Q ss_pred ceEEEEEEcCCCcChHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHhhhhhhc
Q 024345 41 THGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFN 114 (269)
Q Consensus 41 ~~~iItV~G~DrpGIVa~VS~~La~~giNI~dl~~~~~~~~g~F~m~~~v~~p~~~~~~~~L~e~L~~la~el~ 114 (269)
+++.|+|...|+||..++|++.|+++|+||..++.......|...|.+.++-+ ....+++.+.|.++-+=+.
T Consensus 3 m~~~IsV~veNrpGvL~rI~~lfs~rg~NI~Sl~v~~t~d~g~sritivV~~d--~~~leql~kQL~Kl~dV~~ 74 (165)
T 2pc6_A 3 MRHIISLLMENEAGALSRVAGLFSARGYNIESLSVAPTEDPTLSRMTLVTNGP--DEIVEQITKQLNKLIEVVK 74 (165)
T ss_dssp EEEEEEEEEECSTTHHHHHHHHHHHHTCCCCEEEEEECSSTTEEEEEEEEEEC--HHHHHHHHHHHHHSTTEEE
T ss_pred eEEEEEEEEeCCCcHHHHHHHHHHHCCCcEEEEEEEecCCCCEEEEEEEEecc--HHHHHHHHHHhcCCCCEEE
Confidence 47899999999999999999999999999999988644335666676677633 2345667777776644443
No 34
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6
Probab=97.62 E-value=0.00019 Score=62.13 Aligned_cols=73 Identities=19% Similarity=0.190 Sum_probs=57.4
Q ss_pred cceEEEEEEcCCCcChHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHhhhhhhc
Q 024345 40 LTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFN 114 (269)
Q Consensus 40 ~~~~iItV~G~DrpGIVa~VS~~La~~giNI~dl~~~~~~~~g~F~m~~~v~~p~~~~~~~~L~e~L~~la~el~ 114 (269)
.+++.|+|.-.|+||.+++|++.|+++|+||..++.......|.-.|.+.++-+ +...++|.+.|.++-+-+.
T Consensus 27 ~m~~~LsVlVeN~pGvLaRItglfsrRG~NI~SLtV~~ted~gisRitIvV~g~--e~~ieqL~kQL~KLidVik 99 (193)
T 2fgc_A 27 IREHLVSMLVHNKPGVMRKVANLFARRGFNISSITVGESETPGLSRLVIMVKGD--DKTIEQIEKQAYKLVEVVK 99 (193)
T ss_dssp CEEEEEEEEEECCTTHHHHHHHHHHTTTCEEEEEEEEECSSTTEEEEEEEEEEC--TTHHHHHHHHHTTSTTEEE
T ss_pred ceEEEEEEEECCCChHHHHHHHHHHHCCceEEEEEeeccCCCCEEEEEEEEECC--HHHHHHHHHHhcCcCceEE
Confidence 358999999999999999999999999999999988644445666666777654 3357888888887654443
No 35
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=97.47 E-value=0.0036 Score=50.24 Aligned_cols=63 Identities=10% Similarity=0.069 Sum_probs=47.1
Q ss_pred CcceEEEEEEcCCCcChHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHhh
Q 024345 39 TLTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKL 109 (269)
Q Consensus 39 ~~~~~iItV~G~DrpGIVa~VS~~La~~giNI~dl~~~~~~~~g~F~m~~~v~~p~~~~~~~~L~e~L~~l 109 (269)
.|+...++|..+|+||++++|++.|+++|+||..+.+......|. +++.+ . +.+..++.|++.
T Consensus 3 ~m~~~~i~v~v~d~~G~l~~i~~~la~~~inI~~i~~~~~~~~~~--~~~~~--~----d~~~a~~~L~~~ 65 (144)
T 2f06_A 3 AMVAKQLSIFLENKSGRLTEVTEVLAKENINLSALCIAENADFGI--LRGIV--S----DPDKAYKALKDN 65 (144)
T ss_dssp SSEEEEEEEEECSSSSHHHHHHHHHHHTTCCEEEEEEEECSSCEE--EEEEE--S----CHHHHHHHHHHT
T ss_pred ccEEEEEEEEecCCCcHHHHHHHHHHHCCCCEEEEEEEecCCCCE--EEEEe--C----CHHHHHHHHHHc
Confidence 467899999999999999999999999999999998853221122 33432 2 467777777754
No 36
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=97.44 E-value=0.00019 Score=63.28 Aligned_cols=91 Identities=16% Similarity=0.160 Sum_probs=59.4
Q ss_pred cceEEEEEEcCCCcChHHHHHHHHHhCCCeEeEeeeeccC--C-CCeEEEEEEEEeCCCCCCHHHHHHHHHhhhhhhccc
Q 024345 40 LTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPE--K-KNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAM 116 (269)
Q Consensus 40 ~~~~iItV~G~DrpGIVa~VS~~La~~giNI~dl~~~~~~--~-~g~F~m~~~v~~p~~~~~~~~L~e~L~~la~el~l~ 116 (269)
.+++.|.+.+.||||++++|++.|+++++||..+++.... . .+...+. +++.+ . +.+++-+.|.++-.=...
T Consensus 2 ~~~VtL~I~a~DRpGLLsDIt~vLAe~kiNIltIn~~~~~kG~~ng~A~I~--IEV~d-~-~Le~LL~kLrkI~gV~~V- 76 (223)
T 1y7p_A 2 HMLRGLRIIAENKIGVLRDLTTIIAEEGGNITFAQTFLIKHGEHEGKALIY--FEIEG-G-DFEKILERVKTFDYIIEI- 76 (223)
T ss_dssp --CEEEEEEEECCTTHHHHHHHHCC----CEEEEEEEECCSSTTTTEEEEE--EEECS-S-CHHHHHHHHHTCTTEEEE-
T ss_pred CceEEEEEEEcCCCCHHHHHHHHHHHcCCCceEEEEEccccCCcCCEEEEE--EEECC-C-CHHHHHHHHhCCCCeeEE-
Confidence 4678999999999999999999999999999999997542 1 3566666 55554 3 677777777766443332
Q ss_pred eeeeeecC--CCCCeeEEEEEeCC
Q 024345 117 RSVVRVPD--IDPKYKVAVLASKQ 138 (269)
Q Consensus 117 ~~~~~~~~--~~~~~riav~~Sg~ 138 (269)
.+... .-.-+||.+++.|-
T Consensus 77 ---~Rv~~~~~i~gkrvii~ggga 97 (223)
T 1y7p_A 77 ---EEEESFERVFGKRVIILGGGA 97 (223)
T ss_dssp ---EEECCHHHHTCEEEEEEECHH
T ss_pred ---EEEcchhhhcCcEEEEECCcH
Confidence 12221 11237999998774
No 37
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=97.41 E-value=0.00083 Score=55.86 Aligned_cols=88 Identities=13% Similarity=-0.028 Sum_probs=62.9
Q ss_pred ceEEEEEEc-CCCcChHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHhhhhhhccceee
Q 024345 41 THGIHVFHC-PDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMRSV 119 (269)
Q Consensus 41 ~~~iItV~G-~DrpGIVa~VS~~La~~giNI~dl~~~~~~~~g~F~m~~~v~~p~~~~~~~~L~e~L~~la~el~l~~~~ 119 (269)
....|+|.| +|+||+.++|.+.|+++|+||.-++|...+ .|.+.+.+.++-+ +.+...+.|+++.++++.....
T Consensus 24 ~~~~i~v~~~~~~~G~~~~if~~La~~~Invd~i~~s~~~-~g~~~isf~v~~~----~~~~a~~~l~~~~~~l~~~~i~ 98 (167)
T 2re1_A 24 NQARINVRGVPDKPGVAYQILGAVADANIEVDMIIQNVGS-EGTTDFSFTVPRG----DYKQTLEILSERQDSIGAASID 98 (167)
T ss_dssp CCEEEEEEEEECCTTHHHHHHHHHHTTTCCCCCEEEC-----CEEEEEEEECGG----GHHHHHHHHHHSSTTTTCSEEE
T ss_pred CEEEEEEecCCCCcCHHHHHHHHHHHcCCeEEEEEcCCCC-CCeeEEEEEEech----HHHHHHHHHHHHHHHcCCceEE
Confidence 345778887 899999999999999999999999885332 3666666666532 4667788899888888752211
Q ss_pred eeecCCCCCeeEEEEEeC
Q 024345 120 VRVPDIDPKYKVAVLASK 137 (269)
Q Consensus 120 ~~~~~~~~~~riav~~Sg 137 (269)
....-.+|.+.|.+
T Consensus 99 ----~~~~~a~vsvvG~~ 112 (167)
T 2re1_A 99 ----GDDTVCKVSAVGLG 112 (167)
T ss_dssp ----EESSEEEEEEECSS
T ss_pred ----ecCCEEEEEEECCC
Confidence 12345678888877
No 38
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=97.28 E-value=0.0035 Score=51.94 Aligned_cols=103 Identities=16% Similarity=0.063 Sum_probs=70.8
Q ss_pred ceEEEEEEc-CCCcChHHHHHHHHHhCCCeEeEeeeeccC-CCCeEEEEEEEEeCCCCCCHHHHHHHHHhhhhhhcccee
Q 024345 41 THGIHVFHC-PDEVGIVAKLSECIASRGGNILAADVFVPE-KKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMRS 118 (269)
Q Consensus 41 ~~~iItV~G-~DrpGIVa~VS~~La~~giNI~dl~~~~~~-~~g~F~m~~~v~~p~~~~~~~~L~e~L~~la~el~l~~~ 118 (269)
....|++.| +|+||+.+++.+.|+++|+||.-++|...+ ..|...+.+.++-. +.+...+.|+++.++++. .
T Consensus 15 ~~a~Itv~g~~~~~G~~a~if~~La~~~InVd~I~q~~~~~~~g~~~isf~V~~~----d~~~a~~~L~~~~~~~~~-~- 88 (167)
T 2dt9_A 15 DHAQIGLIGIPDQPGIAAKVFQALAERGIAVDMIIQGVPGHDPSRQQMAFTVKKD----FAQEALEALEPVLAEIGG-E- 88 (167)
T ss_dssp SEEEEEEEEEECSTTHHHHHHHHHHHHTCCCSCEEBCCCCSCTTEEEEEEEEEGG----GHHHHHHHHHHHHHHHCC-E-
T ss_pred CEEEEEEecCCCCCCHHHHHHHHHHHcCCcEEEEEcCCCCCCCCceEEEEEEehH----HHHHHHHHHHHHHHHhCC-c-
Confidence 456778888 899999999999999999999999884321 23456666666532 466777888888888874 3
Q ss_pred eeeecCCCCCeeEEEEEeC---CchHHHHHHHhhhcC
Q 024345 119 VVRVPDIDPKYKVAVLASK---QEHCLVDFLYGWQEG 152 (269)
Q Consensus 119 ~~~~~~~~~~~riav~~Sg---~g~~l~~ll~~~~~g 152 (269)
.+. ....-+|.+.|.| ....+..+++...+.
T Consensus 89 -v~~--~~~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~ 122 (167)
T 2dt9_A 89 -AIL--RPDIAKVSIVGVGLASTPEVPAKMFQAVAST 122 (167)
T ss_dssp -EEE--ECSEEEEEEEESSGGGSTHHHHHHHHHHHHT
T ss_pred -EEE--eCCEEEEEEECCCcccCcCHHHHHHHHHHHC
Confidence 222 3456789999987 323334444444333
No 39
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=96.97 E-value=0.0012 Score=53.59 Aligned_cols=64 Identities=11% Similarity=0.098 Sum_probs=43.3
Q ss_pred EEEEEcCCCcChHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHhhhhhh
Q 024345 44 IHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMF 113 (269)
Q Consensus 44 iItV~G~DrpGIVa~VS~~La~~giNI~dl~~~~~~~~g~F~m~~~v~~p~~~~~~~~L~e~L~~la~el 113 (269)
.|.|.|.||+|++++|+++|+++++||..++.... |. +.+.+.... ......|.+.+..+...+
T Consensus 2 ~~~v~~~dr~g~l~~i~~~l~~~~~ni~~~~~~~~---g~--i~~~~~~~~-~~~~~~L~~~l~~i~~~~ 65 (190)
T 2jhe_A 2 RLEVFCEDRLGLTRELLDLLVLRGIDLRGIEIDPI---GR--IYLNFAELE-FESFSSLMAEIRRIAGVT 65 (190)
T ss_dssp EEEEEECSCTTHHHHHHHHHHHTTCCEEEEEEETT---TE--EEEEECCCC-HHHHHHHHHHHHHSTTEE
T ss_pred EEEEEEecCCcHHHHHHHHHHHcCCCeEEEEEecC---CE--EEEEEEeCC-HHHHHHHHHHHHcCCCee
Confidence 47899999999999999999999999999999532 54 333333221 112344555555554444
No 40
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=96.47 E-value=0.0079 Score=58.82 Aligned_cols=66 Identities=17% Similarity=0.108 Sum_probs=49.0
Q ss_pred cceEEEEEEcCCCcChHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHhh
Q 024345 40 LTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKL 109 (269)
Q Consensus 40 ~~~~iItV~G~DrpGIVa~VS~~La~~giNI~dl~~~~~~~~g~F~m~~~v~~p~~~~~~~~L~e~L~~l 109 (269)
+..+.+.+.-+|+||+|++|++.|.++|+||.+++..-...+|.-.|.++++-+ .+ +++-+.+.++
T Consensus 452 ~~~~~l~v~~~D~PG~I~~v~~~Lg~~~INIa~m~v~r~~~~~~a~~~i~vd~~---~~-~~~l~~l~~~ 517 (529)
T 1ygy_A 452 AQGINLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATILLRLDQD---VP-DDVRTAIAAA 517 (529)
T ss_dssp SCSEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEECSSSSCEEEEEEESSC---CC-HHHHHHHHHH
T ss_pred CCccEEEEEcCCCCchHHHHHHHHHhcCCCeeeEEEecCCCCCEEEEEEEECCC---CC-HHHHHHHhcC
Confidence 345678888999999999999999999999999987533345666677777744 23 4455555554
No 41
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=96.42 E-value=0.0098 Score=56.45 Aligned_cols=65 Identities=15% Similarity=0.126 Sum_probs=46.9
Q ss_pred ceEEEEEEcCCCcChHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHhh
Q 024345 41 THGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKL 109 (269)
Q Consensus 41 ~~~iItV~G~DrpGIVa~VS~~La~~giNI~dl~~~~~~~~g~F~m~~~v~~p~~~~~~~~L~e~L~~l 109 (269)
....|.+.-.|+||+|++|++.|+++|+||..+...- .++.-.|.++++-+. . ..+++.+.|.++
T Consensus 330 ~~~rl~~~h~d~PGvi~~i~~iL~~~~iNIa~m~~~r--~g~~A~~vidvD~~~-~-~~~~~l~~l~~i 394 (404)
T 1sc6_A 330 GGRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQT--SAQMGYVVIDIEADE-D-VAEKALQAMKAI 394 (404)
T ss_dssp SSEEEEEEEESCTTHHHHHHHHHHHTTCEEEEEEEEE--CSSEEEEEEEEECCH-H-HHHHHHHHHHTS
T ss_pred CcceEEEEeCCCCCHHHHHHHHHHHcCCCHHHhhccC--CCCEEEEEEEcCCCC-C-CCHHHHHHHhcC
Confidence 3556889999999999999999999999999988754 345556677777431 0 134455555543
No 42
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=96.17 E-value=0.016 Score=50.03 Aligned_cols=90 Identities=17% Similarity=0.011 Sum_probs=64.0
Q ss_pred eEEEEEEc-CCCcChHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHhhhhhhccceeee
Q 024345 42 HGIHVFHC-PDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMRSVV 120 (269)
Q Consensus 42 ~~iItV~G-~DrpGIVa~VS~~La~~giNI~dl~~~~~~~~g~F~m~~~v~~p~~~~~~~~L~e~L~~la~el~l~~~~~ 120 (269)
...||+.| +|+||+.++|-+.|+++|+||.=+.|.....+ .....+.+.+|. .+.+...+.|+++..+++.....
T Consensus 35 ~a~Iti~g~~~~pG~aa~IF~~La~~~InVDmI~Qs~s~~~-~~~~~~sftv~~--~d~~~~~~~l~~~~~~~~~~~v~- 110 (200)
T 4go7_X 35 EAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVE-DGKTDITFTCSR--DVGPAAVEKLDSLRNEIGFSQLL- 110 (200)
T ss_dssp EEEEEEEEEECSTTHHHHHHHHHHHTTCCCCCEECCCCC---CCEEEEEEEEEG--GGHHHHHHHHHTTHHHHCCSEEE-
T ss_pred EEEEEEecCCCCccHHHHHHHHHHHhCcceEEEeecccccc-ccceEEEEecch--hhHHHHHHHHHHHHhhhceeeEE-
Confidence 45677766 79999999999999999999999988533212 223355555553 35777888899998888753322
Q ss_pred eecCCCCCeeEEEEEeCC
Q 024345 121 RVPDIDPKYKVAVLASKQ 138 (269)
Q Consensus 121 ~~~~~~~~~riav~~Sg~ 138 (269)
....--||.+.|.|=
T Consensus 111 ---~~~~iakVSvVG~GM 125 (200)
T 4go7_X 111 ---YDDHIGKVSLIGAGM 125 (200)
T ss_dssp ---EECCEEEEEEEEESC
T ss_pred ---EecCeeeeeeecccc
Confidence 233556899999886
No 43
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=96.14 E-value=0.017 Score=46.26 Aligned_cols=57 Identities=19% Similarity=0.176 Sum_probs=39.1
Q ss_pred EEEEEcCCCcChHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHh
Q 024345 44 IHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFK 108 (269)
Q Consensus 44 iItV~G~DrpGIVa~VS~~La~~giNI~dl~~~~~~~~g~F~m~~~v~~p~~~~~~~~L~e~L~~ 108 (269)
++.+..+|+||.++++++.|+++|+||..+-++. ..+.-. +.++.. +.+...+.|.+
T Consensus 74 vv~v~~~d~pGvla~i~~~L~~~~InI~~~~~~~--~~~~~~--~~i~~~----d~~~A~~~L~~ 130 (144)
T 2f06_A 74 VVGISCPNVPGALAKVLGFLSAEGVFIEYMYSFA--NNNVAN--VVIRPS----NMDKCIEVLKE 130 (144)
T ss_dssp EEEEEEESSTTHHHHHHHHHHHTTCCEEEEEEEE--ETTEEE--EEEEES----CHHHHHHHHHH
T ss_pred EEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEEEc--cCCcEE--EEEEeC----CHHHHHHHHHH
Confidence 4555668999999999999999999998877652 123323 333332 45666666655
No 44
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=95.85 E-value=0.21 Score=41.99 Aligned_cols=88 Identities=16% Similarity=-0.009 Sum_probs=61.0
Q ss_pred EEEEEEc-CCCcChHHHHHHHHHhCCCeEeEeeeeccC-CCCeEEEEEEEEeCCCCCCHHHHHHHHHhhhhhhccceeee
Q 024345 43 GIHVFHC-PDEVGIVAKLSECIASRGGNILAADVFVPE-KKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMRSVV 120 (269)
Q Consensus 43 ~iItV~G-~DrpGIVa~VS~~La~~giNI~dl~~~~~~-~~g~F~m~~~v~~p~~~~~~~~L~e~L~~la~el~l~~~~~ 120 (269)
..|++.| +|+||+.++|.+.|+++|+||.-++|.... ..|.-.+.+.++ . .+.+...+.|+++.++++.....+
T Consensus 17 ~~Iti~~~~~~~G~~a~If~~La~~~I~vd~I~q~~s~~~~g~~~isftv~--~--~~~~~a~~~L~~~~~el~~~~v~~ 92 (181)
T 3s1t_A 17 AKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCS--R--DVGPAAVEKLDSLRNEIGFSQLLY 92 (181)
T ss_dssp EEEEEEEEESSTTHHHHHHHHHHHTTCCCCCEEECCCCTTTCEEEEEEEEE--T--TTHHHHHHHHHHTHHHHCCSEEEE
T ss_pred EEEEEecCCCCcCHHHHHHHHHHHcCCcEEEEEecCCcccCCccEEEEEEe--h--hHHHHHHHHHHHHHHhcCcceEEE
Confidence 3455443 699999999999999999999999875332 145444455554 3 256778888988888886433222
Q ss_pred eecCCCCCeeEEEEEeCC
Q 024345 121 RVPDIDPKYKVAVLASKQ 138 (269)
Q Consensus 121 ~~~~~~~~~riav~~Sg~ 138 (269)
...--+|.+.|.|=
T Consensus 93 ----~~~va~VsvVG~gm 106 (181)
T 3s1t_A 93 ----DDHIGKVSLIGAGM 106 (181)
T ss_dssp ----ESCEEEEEEEEECC
T ss_pred ----eCCEEEEEEEeccc
Confidence 23557899999864
No 45
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=95.70 E-value=0.15 Score=42.45 Aligned_cols=106 Identities=15% Similarity=0.000 Sum_probs=66.5
Q ss_pred eEEEEEE-cCCCcChHHHHHHHHHhCCCeEeEeeeecc-CCCCeEEEEEEEEeCCCCCCHHHHHHHHHhhhhhhccceee
Q 024345 42 HGIHVFH-CPDEVGIVAKLSECIASRGGNILAADVFVP-EKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMRSV 119 (269)
Q Consensus 42 ~~iItV~-G~DrpGIVa~VS~~La~~giNI~dl~~~~~-~~~g~F~m~~~v~~p~~~~~~~~L~e~L~~la~el~l~~~~ 119 (269)
...|+|. .+|+||+.++|.+.|+++|+||.-+.+... +..|.-.+.+.+..+ +.+...+.|+++.++++.....
T Consensus 15 ~~~Itv~~~~~~~G~~a~if~~La~~~InId~i~~s~~~~~~~~~~isf~v~~~----d~~~a~~~l~~~~~~~~~~~v~ 90 (178)
T 2dtj_A 15 EAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVSSVEDGTTDITFTCPRS----DGRRAMEILKKLQVQGNWTNVL 90 (178)
T ss_dssp EEEEEEEEEECSTTHHHHHHHHHHHTTCCCCEEEECCCCTTTCEEEEEEEEEHH----HHHHHHHHHHTTTTTTTCSEEE
T ss_pred EEEEEEecCCCCccHHHHHHHHHHHcCCCEEEEEcCCCCCCCCceEEEEEEccc----cHHHHHHHHHHHHHhcCCCeEE
Confidence 3456663 489999999999999999999999987532 122322222333322 3566778888887777743221
Q ss_pred eeecCCCCCeeEEEEEeCCc---hHHHHHHHhhhcCCCC
Q 024345 120 VRVPDIDPKYKVAVLASKQE---HCLVDFLYGWQEGKLP 155 (269)
Q Consensus 120 ~~~~~~~~~~riav~~Sg~g---~~l~~ll~~~~~g~l~ 155 (269)
..+..-+|.+.|+|=. ..+..++....+..++
T Consensus 91 ----~~~~~a~VsvVG~gm~~~~Gv~arif~aLa~~~In 125 (178)
T 2dtj_A 91 ----YDDQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVN 125 (178)
T ss_dssp ----EESCEEEEEEEEECCTTCHHHHHHHHHHHHHTTCC
T ss_pred ----EeCCeEEEEEEcCCcccCccHHHHHHHHHHHCCCC
Confidence 2346678999998642 2344455554444333
No 46
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=95.13 E-value=0.015 Score=54.49 Aligned_cols=71 Identities=15% Similarity=0.273 Sum_probs=43.0
Q ss_pred CCCCCeeEEEEEeCCchHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhc
Q 024345 124 DIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 203 (269)
Q Consensus 124 ~~~~~~riav~~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~ 203 (269)
...+|.||+|.|+|-|..- +.++++-.-.+++++|++.. .....++|+++|||++. + .+ ++++
T Consensus 3 ~~~~~~rv~VvG~G~g~~h---~~a~~~~~~~~elvav~~~~----~~~a~~~a~~~gv~~~~-~-----~~----~l~~ 65 (372)
T 4gmf_A 3 SASPKQRVLIVGAKFGEMY---LNAFMQPPEGLELVGLLAQG----SARSRELAHAFGIPLYT-S-----PE----QITG 65 (372)
T ss_dssp ----CEEEEEECSTTTHHH---HHTTSSCCTTEEEEEEECCS----SHHHHHHHHHTTCCEES-S-----GG----GCCS
T ss_pred CCCCCCEEEEEehHHHHHH---HHHHHhCCCCeEEEEEECCC----HHHHHHHHHHhCCCEEC-C-----HH----HHhc
Confidence 4568899999999866432 23332221137888877654 35688999999999753 2 12 2334
Q ss_pred cCCEEEEE
Q 024345 204 NTDFLVLA 211 (269)
Q Consensus 204 ~~Dlivla 211 (269)
++|+++++
T Consensus 66 ~~D~v~i~ 73 (372)
T 4gmf_A 66 MPDIACIV 73 (372)
T ss_dssp CCSEEEEC
T ss_pred CCCEEEEE
Confidence 67777665
No 47
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=94.85 E-value=0.097 Score=43.14 Aligned_cols=62 Identities=23% Similarity=0.089 Sum_probs=46.0
Q ss_pred ceEEEEEEcCC---CcChHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHhhhhhhcc
Q 024345 41 THGIHVFHCPD---EVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNA 115 (269)
Q Consensus 41 ~~~iItV~G~D---rpGIVa~VS~~La~~giNI~dl~~~~~~~~g~F~m~~~v~~p~~~~~~~~L~e~L~~la~el~l 115 (269)
.-..++|+|.+ +||+.+++.+.|+++|+||.-+++. .-.+.+.++ .++..++++.+.++|.+
T Consensus 102 ~~a~vsvvG~~m~~~~Gv~a~i~~aL~~~~InI~~ists------e~~is~vv~-------~~d~~~av~~Lh~~f~l 166 (167)
T 2re1_A 102 TVCKVSAVGLGMRSHVGVAAKIFRTLAEEGINIQMISTS------EIKVSVLID-------EKYMELATRVLHKAFNL 166 (167)
T ss_dssp SEEEEEEECSSCTTCCCHHHHHHHHHHHTTCCCCEEEEC------SSEEEEEEE-------GGGHHHHHHHHHHHTTC
T ss_pred CEEEEEEECCCcCCCcCHHHHHHHHHHHCCCcEEEEEcc------cCEEEEEEe-------HHHHHHHHHHHHHHhcC
Confidence 35789999998 9999999999999999999998641 112333333 24466788888777764
No 48
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=94.18 E-value=0.12 Score=49.37 Aligned_cols=65 Identities=12% Similarity=0.111 Sum_probs=45.9
Q ss_pred hhhhhheeccccccccccceecCCCCCCCcceEEEEEEcCCCcChHHHHHHHHHhCCCeEeEeeeec
Q 024345 11 LQQVVKFTNRSFKSLKFPGEPIESSVSPTLTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFV 77 (269)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iItV~G~DrpGIVa~VS~~La~~giNI~dl~~~~ 77 (269)
.+++..|.+..--.-.+|+-+. +.+.......|+++=.+.||++++|+++|+++|+||.++....
T Consensus 314 ~~nl~~~l~~g~~~~~Vn~p~~--~~~~~~~~~r~~~~h~n~p~~~~~i~~~~~~~~~ni~~~~~~~ 378 (416)
T 3k5p_A 314 TRKLVEYSDVGSTVGAVNFPQV--QLPPRPTGTRFMHVHENRPGILNSLMNVFSHHHINIASQFLQT 378 (416)
T ss_dssp HHHHHHHHHHCCCTTBSSSCCC--CCCCCSSSEEEEEEECCCTTHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred HHHHHHHHhhCCCCceeeCCCc--CCCCCCCceEEEEEecCCccHHHHHHHHHHHcCCCHHHHhccC
Confidence 4455555433222234555444 2334445689999999999999999999999999999987653
No 49
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=93.84 E-value=0.13 Score=49.44 Aligned_cols=70 Identities=13% Similarity=0.059 Sum_probs=49.5
Q ss_pred CCcceEEEEEEcCCCcChHHHHHHHHHhCCCeEeEeeeeccC-CCCeEEEEEEEEeCCCCCCHHHHHHHHHhhhh
Q 024345 38 PTLTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPE-KKNVFYSRSEFIFDPIKWPREQMDEDFFKLSK 111 (269)
Q Consensus 38 ~~~~~~iItV~G~DrpGIVa~VS~~La~~giNI~dl~~~~~~-~~g~F~m~~~v~~p~~~~~~~~L~e~L~~la~ 111 (269)
....+|.+.+...|+||++++|++.|+++|++|..+-|.... ..+. ..+.+-- . .....+++++++++.+
T Consensus 355 ~~~~~yy~r~~~~d~~gvl~~i~~~~~~~~isi~~~~q~~~~~~~~~--~~~v~~t-h-~~~e~~~~~~~~~~~~ 425 (444)
T 3mtj_A 355 AVRTAYYLRLRAFDRPGVLADITRILADSSISIDAMVQKEPAEGEEQ--VDIILLT-H-VTLEKNVNAAIAKIEA 425 (444)
T ss_dssp GCEEEEEEEEEEC-CCHHHHHHHHHHHHTTCCEEEEEECC------C--EEEEEEE-C-SEEHHHHHHHHHHHTT
T ss_pred HcceeeEEEEEecCcccHHHHHHHHHHhcCCceeEEeecccccCCCC--ceEEEEe-c-cCCHHHHHHHHHHHhc
Confidence 345789999999999999999999999999999999885321 1112 2222221 1 3457889999888865
No 50
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=93.61 E-value=0.21 Score=41.03 Aligned_cols=62 Identities=16% Similarity=0.102 Sum_probs=45.1
Q ss_pred ceEEEEEEcCC---CcChHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHhhhhhhcc
Q 024345 41 THGIHVFHCPD---EVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNA 115 (269)
Q Consensus 41 ~~~iItV~G~D---rpGIVa~VS~~La~~giNI~dl~~~~~~~~g~F~m~~~v~~p~~~~~~~~L~e~L~~la~el~l 115 (269)
.-..++|+|.+ +||+.+++.+.|++.|+||.-+++ +.. .+.+.++ .++..++++.|-+.|.+
T Consensus 94 ~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~is~-----Se~-~is~vv~-------~~d~~~Av~~Lh~~f~~ 158 (167)
T 2dt9_A 94 DIAKVSIVGVGLASTPEVPAKMFQAVASTGANIEMIAT-----SEV-RISVIIP-------AEYAEAALRAVHQAFEL 158 (167)
T ss_dssp SEEEEEEEESSGGGSTHHHHHHHHHHHHTTCCCCEEEE-----CSS-EEEEEEE-------GGGHHHHHHHHHHHTC-
T ss_pred CEEEEEEECCCcccCcCHHHHHHHHHHHCCCCEEEEEc-----cCC-EEEEEEe-------HHHHHHHHHHHHHHHcC
Confidence 34568999987 999999999999999999976653 222 4444443 24567777777777764
No 51
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=93.56 E-value=0.12 Score=43.15 Aligned_cols=62 Identities=15% Similarity=0.134 Sum_probs=47.0
Q ss_pred ceEEEEEEcC---CCcChHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHhhhhhhcc
Q 024345 41 THGIHVFHCP---DEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNA 115 (269)
Q Consensus 41 ~~~iItV~G~---DrpGIVa~VS~~La~~giNI~dl~~~~~~~~g~F~m~~~v~~p~~~~~~~~L~e~L~~la~el~l 115 (269)
.-..|+|+|. |+||+.+++.+.|++.|+||.-+++. . -.+.+.+ + .++..++++.|.+.|.+
T Consensus 94 ~~a~VsvVG~gm~~~~Gv~arif~aLa~~~InI~~istS---e---~~Is~vV--~-----~~d~~~Av~~Lh~~F~l 158 (178)
T 2dtj_A 94 QVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIELISTS---E---IRISVLI--R-----EDDLDAAARALHEQFQL 158 (178)
T ss_dssp CEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEEEEE---T---TEEEEEE--E-----GGGHHHHHHHHHHHHTC
T ss_pred CeEEEEEEcCCcccCccHHHHHHHHHHHCCCCEEEEEcC---C---CeEEEEE--e-----HHHHHHHHHHHHHHHcc
Confidence 4567899998 89999999999999999999988642 1 1222333 2 36678888888888875
No 52
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=92.97 E-value=1.7 Score=40.90 Aligned_cols=86 Identities=19% Similarity=-0.054 Sum_probs=60.0
Q ss_pred EEEEEEc-CCCcChHHHHHHHHHhCCCeEeEeeeeccCC--CCeEEEEEEEEeCCCCCCHHHHHHHHHhhhhhhccceee
Q 024345 43 GIHVFHC-PDEVGIVAKLSECIASRGGNILAADVFVPEK--KNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMRSV 119 (269)
Q Consensus 43 ~iItV~G-~DrpGIVa~VS~~La~~giNI~dl~~~~~~~--~g~F~m~~~v~~p~~~~~~~~L~e~L~~la~el~l~~~~ 119 (269)
..|+|.| +|+||+.++|.+.|+++|+||.-++|.. .. .|...+.+.++ . .+.+...+.|+++.++++...
T Consensus 265 ~~i~v~~~~~~~g~~~~If~~La~~~I~vd~I~q~~-s~~~~g~~~isf~v~--~--~~~~~a~~~l~~~~~~~~~~~-- 337 (421)
T 3ab4_A 265 AKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNV-FSVEDGTTDITFTCP--R--SDGRRAMEILKKLQVQGNWTN-- 337 (421)
T ss_dssp EEEEEEEEESSTTHHHHHHHHHHHTTCCCEEEEECC-CC--CCEEEEEEEEE--T--TTHHHHHHHHHHHHTTTTCSE--
T ss_pred EEEEEeccCCcccHHHHHHHHHHHcCCcEEEEEccC-ccccCCcceEEEEEe--c--hhHHHHHHHHHHHHHHcCCce--
Confidence 4567774 8999999999999999999999997721 11 34445555554 2 256777788888888887422
Q ss_pred eeecCCCCCeeEEEEEeC
Q 024345 120 VRVPDIDPKYKVAVLASK 137 (269)
Q Consensus 120 ~~~~~~~~~~riav~~Sg 137 (269)
... ....-+|.+.|.|
T Consensus 338 v~~--~~~~a~vsvVG~g 353 (421)
T 3ab4_A 338 VLY--DDQVGKVSLVGAG 353 (421)
T ss_dssp EEE--ECCEEEEEEECGG
T ss_pred EEE--eCCeEEEEEEccC
Confidence 112 2355688888875
No 53
>3mwb_A Prephenate dehydratase; L-Phe, PSI, MCSG, structural genomics, midwest center for ST genomics, protein structure initiative, lyase; HET: MSE PHE; 2.00A {Arthrobacter aurescens}
Probab=92.40 E-value=0.89 Score=41.73 Aligned_cols=72 Identities=14% Similarity=0.140 Sum_probs=50.1
Q ss_pred CcceEEEEEEcC-CCcChHHHHHHHHHhCCCeEeEeeeeccC-CCCeEEEEEEEEeCCCCCCHHHHHHHHHhhhhhh
Q 024345 39 TLTHGIHVFHCP-DEVGIVAKLSECIASRGGNILAADVFVPE-KKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMF 113 (269)
Q Consensus 39 ~~~~~iItV~G~-DrpGIVa~VS~~La~~giNI~dl~~~~~~-~~g~F~m~~~v~~p~~~~~~~~L~e~L~~la~el 113 (269)
...+..|.+.-+ |+||-.+++=+.|+.+|+|+..+.+.... ..+.|..-++++ + ..+-+.++++|++|....
T Consensus 198 ~~~kTSl~f~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~e--g-~~~d~~v~~aL~~L~~~~ 271 (313)
T 3mwb_A 198 GADKTTVVVPLPEDHPGALMEILDQFASRGVNLSRIESRPTGQYLGHYFFSIDAD--G-HATDSRVADALAGLHRIS 271 (313)
T ss_dssp SSEEEEEEEECSSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTSEEEEEEEE--S-CTTSHHHHHHHHHHHHHC
T ss_pred CCCeEEEEEEeCCCCCCHHHHHHHHHHHCCccEEEEEEeecCCCCccEEEEEEEe--C-CCCcHHHHHHHHHHHHhc
Confidence 344556666665 99999999999999999999999997432 234444345554 2 334467888888775543
No 54
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=91.61 E-value=0.26 Score=42.43 Aligned_cols=63 Identities=17% Similarity=0.160 Sum_probs=48.7
Q ss_pred ceEEEEEEcC---CCcChHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHhhhhhhccc
Q 024345 41 THGIHVFHCP---DEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAM 116 (269)
Q Consensus 41 ~~~iItV~G~---DrpGIVa~VS~~La~~giNI~dl~~~~~~~~g~F~m~~~v~~p~~~~~~~~L~e~L~~la~el~l~ 116 (269)
.-..++++|. .+||+-+++-+.|++.|+||.-+++. .-.+.+.+ + .++..+++..|-+.|+|.
T Consensus 114 ~iakVSvVG~GM~~~~GVaak~F~aLa~~~INI~mIstS------Ei~IS~vV--~-----~~d~~~Av~aLH~~F~L~ 179 (200)
T 4go7_X 114 HIGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELISTS------EIRISVLC--R-----DTELDKAVVALHEAFGLG 179 (200)
T ss_dssp CEEEEEEEEESCTTCHHHHHHHHHHHHHTTCCCCEEEEC------SSEEEEEE--E-----GGGHHHHHHHHHHHHTC-
T ss_pred CeeeeeeeccccccCCCcHHHHHHHHHHCCCCEEEEEcc------CCEEEEEE--e-----HHHHHHHHHHHHHHhCCC
Confidence 3467889987 78999999999999999999999752 12333333 3 366889999999999973
No 55
>2qmx_A Prephenate dehydratase; APC86053, L-Phe inhibition, PDT, CHL tepidum TLS, structural genomics, PSI-2, protein structure initiative; HET: PHE; 2.30A {Chlorobium tepidum tls}
Probab=91.52 E-value=0.93 Score=40.97 Aligned_cols=69 Identities=17% Similarity=0.218 Sum_probs=47.6
Q ss_pred eEEEEEEcCCCcChHHHHHHHHHhCCCeEeEeeeeccC-CCCeEEEEEEEEeCCCCCCHHHHHHHHHhhhhhh
Q 024345 42 HGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPE-KKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMF 113 (269)
Q Consensus 42 ~~iItV~G~DrpGIVa~VS~~La~~giNI~dl~~~~~~-~~g~F~m~~~v~~p~~~~~~~~L~e~L~~la~el 113 (269)
+..|.+.-+|+||-.+++=+.|+.+|+|+..+.+.... ..+.|..-++++ + ..+-+.++++|++|....
T Consensus 200 ktsl~f~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfvD~e--g-~~~d~~v~~aL~~L~~~~ 269 (283)
T 2qmx_A 200 KTSIVFALPNEQGSLFRALATFALRGIDLTKIESRPSRKKAFEYLFYADFI--G-HREDQNVHNALENLREFA 269 (283)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTEEEEEEEEE--S-CTTSHHHHHHHHHHHTTC
T ss_pred eEEEEEEcCCCCchHHHHHHHHHHcCCCeeEEEeeEcCCCCcceEEEEEEe--c-CCCcHHHHHHHHHHHHhc
Confidence 33444444799999999999999999999999997432 234444445554 2 234467888888875543
No 56
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=90.53 E-value=0.78 Score=40.44 Aligned_cols=79 Identities=14% Similarity=0.123 Sum_probs=49.2
Q ss_pred CeeEEEEEeCCc-hHHHHHHHhhhcCCCCceEEEEeeCCCCC---------CChhHHHHHHhCCCCeEEeCCCCC--chH
Q 024345 128 KYKVAVLASKQE-HCLVDFLYGWQEGKLPVEITCVISNHDRG---------PNSHVIRFLERHGIPYHYLCAKEN--ERE 195 (269)
Q Consensus 128 ~~riav~~Sg~g-~~l~~ll~~~~~g~l~~~i~~Visn~~~~---------~~~~v~~~a~~~gIP~~~~~~~~~--~~e 195 (269)
.||++++.||.- |++ ++....++| ++|.++.+..+.. +-..+...|+..|||++.++.... ...
T Consensus 4 ~MKvvvl~SGGkDSs~-al~~l~~~G---~eV~~L~~~~~~~~~s~~~h~~~~e~a~~~A~~LGIpl~~v~~~g~~~~e~ 79 (237)
T 3rjz_A 4 LADVAVLYSGGKDSNY-ALYWAIKNR---FSVKFLVTMVSENEESYMYHTINANLTDLQARALGIPLVKGFTQGEKEKEV 79 (237)
T ss_dssp CSEEEEECCSSHHHHH-HHHHHHHTT---CEEEEEEEEECC--------CCSSSHHHHHHHHHTCCEEEEEC------CH
T ss_pred CCEEEEEecCcHHHHH-HHHHHHHcC---CeEEEEEEEcCCCCCccccCCccHHHHHHHHHHcCCCEEEEECCCCchHHH
Confidence 379999999975 554 444444566 6887775443210 113477889999999999873321 123
Q ss_pred HHHHHHhc--cCCEEEE
Q 024345 196 EELLELVQ--NTDFLVL 210 (269)
Q Consensus 196 ~~l~~~l~--~~Dlivl 210 (269)
+++.++++ +++.+|.
T Consensus 80 e~l~~~l~~~~i~~vv~ 96 (237)
T 3rjz_A 80 EDLKRVLSGLKIQGIVA 96 (237)
T ss_dssp HHHHHHHTTSCCSEEEC
T ss_pred HHHHHHHHhcCCcEEEE
Confidence 56677777 5666653
No 57
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=90.26 E-value=6.1 Score=39.09 Aligned_cols=128 Identities=14% Similarity=0.120 Sum_probs=76.3
Q ss_pred EEEEEc-CCCcChHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHhhhhhh-------cc
Q 024345 44 IHVFHC-PDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMF-------NA 115 (269)
Q Consensus 44 iItV~G-~DrpGIVa~VS~~La~~giNI~dl~~~~~~~~g~F~m~~~v~~p~~~~~~~~L~e~L~~la~el-------~l 115 (269)
.|++.+ +|+||+.++|-+.|+++|+|+.-+.|.. +.+|.-. +.+.++. .+.+...+.|+++..++ +.
T Consensus 272 ~i~i~~~~~~~g~~~~if~~La~~~I~Vd~I~qs~-~~~~~~~--Isftv~~--~~~~~a~~~l~~~~~el~~~~~~~~~ 346 (600)
T 3l76_A 272 KVALLRVPDRPGVASKLFRDIAQQQVDIDLIIQSI-HDGNSND--IAFTVVK--DLLNTAEAVTSAIAPALRSYPEADQE 346 (600)
T ss_dssp EEEEEEEECSTTHHHHHHHHHHHTTCCCCCEEBCC-CBTTEEE--EEEEECG--GGHHHHHHHHHHHGGGGSSSTTCSSS
T ss_pred EEEEeCCCCcccHHHHHHHHHHHcCCCEEEEEeec-cCCCCce--EEEEEeH--HHHHHHHHHHHHHHHHhhccccccCc
Confidence 455555 6999999999999999999998887743 1245444 4444443 25677788888888887 32
Q ss_pred ceeeeeecCCCCCeeEEEEEeCCc---hHHHHHHHhhhcCCC--------CceEEEEeeCCCCCCChhHHHHHHhCCC
Q 024345 116 MRSVVRVPDIDPKYKVAVLASKQE---HCLVDFLYGWQEGKL--------PVEITCVISNHDRGPNSHVIRFLERHGI 182 (269)
Q Consensus 116 ~~~~~~~~~~~~~~riav~~Sg~g---~~l~~ll~~~~~g~l--------~~~i~~Visn~~~~~~~~v~~~a~~~gI 182 (269)
.... ....--+|.+.|.|-. ..+..++....+..+ ...|+++|...+ .+..+..+-+++..
T Consensus 347 ~~v~----~~~~~a~VsvVG~gm~~~~Gv~a~if~aL~~~~Ini~~istSe~~Is~vI~~~d--~~~Av~aLh~~f~~ 418 (600)
T 3l76_A 347 AEII----VEKGIAKIAIAGAGMIGRPGIAAKMFKTLADVGVNIEMISTSEVKVSCVIDQRD--ADRAIAALSNAFGV 418 (600)
T ss_dssp SEEE----EECSEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCCCEEEECSSEEEEEEEGGG--HHHHHHHHHHHTTC
T ss_pred ceeE----ecCCeEEEEEECCCcccCccHHHHHHHHHHhCCCcEEEEecCCCEEEEEEcHHH--HHHHHHHHHHhhcc
Confidence 2211 1235568888887531 233334443333222 245777776553 12234444555544
No 58
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=90.17 E-value=0.59 Score=42.07 Aligned_cols=71 Identities=10% Similarity=0.195 Sum_probs=44.1
Q ss_pred CCCCeeEEEEEeCCc-h-HHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHh
Q 024345 125 IDPKYKVAVLASKQE-H-CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELV 202 (269)
Q Consensus 125 ~~~~~riav~~Sg~g-~-~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l 202 (269)
...|+||+|+|.|.- . .....+.. .+ .+++++|+... ...+.++|+++|+|-.+-+ +-+++
T Consensus 20 ~~~mirigiIG~G~ig~~~~~~~~~~--~~--~~~lvav~d~~----~~~a~~~a~~~g~~~~y~d---------~~ell 82 (350)
T 4had_A 20 FQSMLRFGIISTAKIGRDNVVPAIQD--AE--NCVVTAIASRD----LTRAREMADRFSVPHAFGS---------YEEML 82 (350)
T ss_dssp --CCEEEEEESCCHHHHHTHHHHHHH--CS--SEEEEEEECSS----HHHHHHHHHHHTCSEEESS---------HHHHH
T ss_pred ccCccEEEEEcChHHHHHHHHHHHHh--CC--CeEEEEEECCC----HHHHHHHHHHcCCCeeeCC---------HHHHh
Confidence 457799999999973 2 22222332 22 36887766533 3467899999999965522 22345
Q ss_pred c--cCCEEEEEe
Q 024345 203 Q--NTDFLVLAR 212 (269)
Q Consensus 203 ~--~~Dlivla~ 212 (269)
+ ++|.|+.+-
T Consensus 83 ~~~~iDaV~I~t 94 (350)
T 4had_A 83 ASDVIDAVYIPL 94 (350)
T ss_dssp HCSSCSEEEECS
T ss_pred cCCCCCEEEEeC
Confidence 4 688888764
No 59
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=90.14 E-value=0.57 Score=46.51 Aligned_cols=92 Identities=16% Similarity=0.091 Sum_probs=61.6
Q ss_pred ceEEEEEEc-CCCcChHHHHHHHHHhCCCeEeEeeeeccCC--CCeEEEEEEEEeCCCCCCHHHHHHHHHhhhhhhccce
Q 024345 41 THGIHVFHC-PDEVGIVAKLSECIASRGGNILAADVFVPEK--KNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMR 117 (269)
Q Consensus 41 ~~~iItV~G-~DrpGIVa~VS~~La~~giNI~dl~~~~~~~--~g~F~m~~~v~~p~~~~~~~~L~e~L~~la~el~l~~ 117 (269)
....|++.+ +|+||+.++|-+.|+++|+|+.=+.|..... +|.+...+.+.+|. .+.+...+.|+++.++++..+
T Consensus 443 ~~a~i~i~~~~~~~g~~~~if~~La~~~I~vDmI~q~~~~~~~~g~~~~~isftv~~--~d~~~a~~~l~~~~~~~~~~~ 520 (600)
T 3l76_A 443 DQAQIAIRHVPDRPGMAAQLFTALAEANISVDMIIQSQRCRINQGTPCRDIAFMVAE--GDSSQAEAILQPLIKDWLDAA 520 (600)
T ss_dssp SEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCEEEEEEECCCSSSSCEEEEEEEEEH--HHHHHHHHHHHHHTTTSTTCE
T ss_pred CEEEEEEecCCCCccHHHHHHHHHHHcCCcEEEEEecccccccCCCccceEEEEEeH--HHHHHHHHHHHHHHHhcCCce
Confidence 344566655 8999999999999999999998887764321 35333344444443 246677788888888877433
Q ss_pred eeeeecCCCCCeeEEEEEeCC
Q 024345 118 SVVRVPDIDPKYKVAVLASKQ 138 (269)
Q Consensus 118 ~~~~~~~~~~~~riav~~Sg~ 138 (269)
..+ ...--||++.|.|=
T Consensus 521 v~~----~~~~akVSiVG~GM 537 (600)
T 3l76_A 521 IVV----NKAIAKVSIVGSGM 537 (600)
T ss_dssp EEE----ECCEEEEEEECGGG
T ss_pred EEE----eCCeEEEEEECccc
Confidence 222 23556899887653
No 60
>2qmw_A PDT, prephenate dehydratase; APC85812, prephenate dehydratase (PDT), staphylococcus aureu aureus MU50, structural genomics, PSI-2; 2.30A {Staphylococcus aureus subsp} SCOP: c.94.1.1 d.58.18.3
Probab=90.11 E-value=1.3 Score=39.66 Aligned_cols=68 Identities=10% Similarity=-0.021 Sum_probs=46.2
Q ss_pred eEEEEEEc---CCCcChHHHHHHHHHhCCCeEeEeeeeccC-CCCeEEEEEEEEeCCCCCCHHHHHHHHHhhhhhh
Q 024345 42 HGIHVFHC---PDEVGIVAKLSECIASRGGNILAADVFVPE-KKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMF 113 (269)
Q Consensus 42 ~~iItV~G---~DrpGIVa~VS~~La~~giNI~dl~~~~~~-~~g~F~m~~~v~~p~~~~~~~~L~e~L~~la~el 113 (269)
+..|.+.- +|+||-.+++=+.|+.+|+|+..+.+.... ..+.|..-++++ . .+-+.++++|++|....
T Consensus 186 ktsl~f~~~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~e-~---~~d~~v~~aL~~L~~~~ 257 (267)
T 2qmw_A 186 ATSLMFLITPMHDKPGLLASVLNTFALFNINLSWIESRPLKTQLGMYRFFVQAD-S---AITTDIKKVIAILETLD 257 (267)
T ss_dssp CSEEEEEEEESSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTCEEEEEEES-C---CSCHHHHHHHHHHHHTT
T ss_pred eEEEEEEcCCCCCCcChHHHHHHHHHHcCCCeeEEEEeecCCCCccEEEEEEEe-c---CCcHHHHHHHHHHHHhc
Confidence 33444444 899999999999999999999999997432 223333334444 2 13367888888875543
No 61
>3luy_A Probable chorismate mutase; structural genomics, APC38059, 3-phenylp PSI-2, protein structure initiative; HET: PPY; 2.00A {Bifidobacterium adolescentis}
Probab=89.90 E-value=1.7 Score=40.17 Aligned_cols=68 Identities=10% Similarity=0.064 Sum_probs=46.7
Q ss_pred EEEEEEc-CCCcChHHHHHHHHHhCCCeEeEeeeeccCC-CCeEEEEEEEEeCCCCCCHHHHHHHHHhhhhhh
Q 024345 43 GIHVFHC-PDEVGIVAKLSECIASRGGNILAADVFVPEK-KNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMF 113 (269)
Q Consensus 43 ~iItV~G-~DrpGIVa~VS~~La~~giNI~dl~~~~~~~-~g~F~m~~~v~~p~~~~~~~~L~e~L~~la~el 113 (269)
.++.++- .|+||-.+++=+.|+.+|+|+..+.+..... .+.|. +-+++.+ ..+-..++++|+++....
T Consensus 208 s~i~~~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~--FfiD~eg-~~~d~~v~~AL~~L~~~~ 277 (329)
T 3luy_A 208 SVLTLIPLVTGPGVLANLLDVFRDAGLNMTSFISRPIKGRTGTYS--FIVTLDA-APWEERFRDALVEIAEHG 277 (329)
T ss_dssp EEEEEECSCCSTTHHHHHHHHHHHTTCCEEEEEEEEETTEEEEEE--EEEEESS-CTTSHHHHHHHHHHHHTT
T ss_pred EEEEEecCCCCCCHHHHHHHHHHHCCcceEEEEeeECCCCCccEE--EEEEEeC-CcCCHHHHHHHHHHHHhC
Confidence 3344444 3899999999999999999999999964321 12333 3355544 445577888888876543
No 62
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=89.68 E-value=0.58 Score=39.22 Aligned_cols=62 Identities=18% Similarity=0.170 Sum_probs=47.8
Q ss_pred ceEEEEEEcC---CCcChHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHhhhhhhcc
Q 024345 41 THGIHVFHCP---DEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNA 115 (269)
Q Consensus 41 ~~~iItV~G~---DrpGIVa~VS~~La~~giNI~dl~~~~~~~~g~F~m~~~v~~p~~~~~~~~L~e~L~~la~el~l 115 (269)
.-..++++|. ++||+.+++.+.|++.|+||.-+++. .-.+.+.++ .++..+++..|-+.|.+
T Consensus 95 ~va~VsvVG~gm~~~~Gvaa~~f~aLa~~~InI~~IstS------ei~Is~vV~-------~~d~~~Av~aLH~~f~l 159 (181)
T 3s1t_A 95 HIGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELISTS------EIRISVLCR-------DTELDKAVVALHEAFGL 159 (181)
T ss_dssp CEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEEEEE------TTEEEEEEE-------GGGHHHHHHHHHHHHTC
T ss_pred CEEEEEEEecccccCchHHHHHHHHHHHCCCcEEEEEcC------CCEEEEEEe-------HHHHHHHHHHHHHHHcC
Confidence 4568899998 89999999999999999999998852 113333333 35577888888888876
No 63
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=88.13 E-value=0.92 Score=40.85 Aligned_cols=72 Identities=4% Similarity=-0.001 Sum_probs=42.4
Q ss_pred CCeeEEEEEeCCc-h-HHHHH---HHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHH
Q 024345 127 PKYKVAVLASKQE-H-CLVDF---LYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLEL 201 (269)
Q Consensus 127 ~~~riav~~Sg~g-~-~l~~l---l~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~ 201 (269)
+|.||||+|.|.- . -+.++ ..... ..-.+++++|+... ...+.++|+++|+|-.+-+ +-++
T Consensus 24 kkirvgiIG~G~ig~~H~~a~~~~~~~~~-~~~~~~lvav~d~~----~~~a~~~a~~~g~~~~y~d---------~~el 89 (393)
T 4fb5_A 24 KPLGIGLIGTGYMGKCHALAWNAVKTVFG-DVERPRLVHLAEAN----AGLAEARAGEFGFEKATAD---------WRAL 89 (393)
T ss_dssp CCCEEEEECCSHHHHHHHHHHTTHHHHHC-SSCCCEEEEEECC------TTHHHHHHHHTCSEEESC---------HHHH
T ss_pred CCccEEEEcCCHHHHHHHHHHHhhhhhhc-cCCCcEEEEEECCC----HHHHHHHHHHhCCCeecCC---------HHHH
Confidence 4579999999973 2 12221 11111 11136888877644 2347889999999966522 2234
Q ss_pred hc--cCCEEEEEe
Q 024345 202 VQ--NTDFLVLAR 212 (269)
Q Consensus 202 l~--~~Dlivla~ 212 (269)
|+ ++|+|+.+-
T Consensus 90 l~~~~iDaV~Iat 102 (393)
T 4fb5_A 90 IADPEVDVVSVTT 102 (393)
T ss_dssp HHCTTCCEEEECS
T ss_pred hcCCCCcEEEECC
Confidence 44 688888764
No 64
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=87.22 E-value=1 Score=40.67 Aligned_cols=71 Identities=15% Similarity=0.199 Sum_probs=42.8
Q ss_pred CCCCeeEEEEEeCC-ch-HHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHh
Q 024345 125 IDPKYKVAVLASKQ-EH-CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELV 202 (269)
Q Consensus 125 ~~~~~riav~~Sg~-g~-~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l 202 (269)
..+++||+|+|.|. |. -+..+... . + .+++++|.... ...+.++++++|++++. +.+ +++
T Consensus 10 ~~~~~rvgiiG~G~~g~~~~~~l~~~-~-~--~~~lvav~d~~----~~~~~~~~~~~~~~~~~------~~~----~ll 71 (354)
T 3q2i_A 10 TDRKIRFALVGCGRIANNHFGALEKH-A-D--RAELIDVCDID----PAALKAAVERTGARGHA------SLT----DML 71 (354)
T ss_dssp CSSCEEEEEECCSTTHHHHHHHHHHT-T-T--TEEEEEEECSS----HHHHHHHHHHHCCEEES------CHH----HHH
T ss_pred CCCcceEEEEcCcHHHHHHHHHHHhC-C-C--CeEEEEEEcCC----HHHHHHHHHHcCCceeC------CHH----HHh
Confidence 34679999999997 33 33333331 0 2 36777665533 34567888899985432 122 334
Q ss_pred c--cCCEEEEEec
Q 024345 203 Q--NTDFLVLARY 213 (269)
Q Consensus 203 ~--~~Dlivla~y 213 (269)
+ ++|+++++--
T Consensus 72 ~~~~~D~V~i~tp 84 (354)
T 3q2i_A 72 AQTDADIVILTTP 84 (354)
T ss_dssp HHCCCSEEEECSC
T ss_pred cCCCCCEEEECCC
Confidence 3 7888887653
No 65
>3t38_A Arsenate reductase; low molecular weight tyrosine phosphatase fold, reduction of to arsenite, oxidoreductase; 2.20A {Corynebacterium glutamicum}
Probab=85.88 E-value=5.1 Score=34.57 Aligned_cols=126 Identities=13% Similarity=0.157 Sum_probs=66.3
Q ss_pred HHHHHhhhhhhccceeeeeecCCCCCeeEEEEEeCCc---hHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHh
Q 024345 103 DEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQE---HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLER 179 (269)
Q Consensus 103 ~e~L~~la~el~l~~~~~~~~~~~~~~riav~~Sg~g---~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~ 179 (269)
++.|.+++..-|. ....++||.|..+|+- .-.+.+++....+. .++.---+.+...++..+.+.+++
T Consensus 64 ~~rl~~l~~~~~~--------~~~~~~~VLFVCtgN~cRSpmAEal~~~~~~~~--~~v~SAGt~~g~~~dp~a~~vl~e 133 (213)
T 3t38_A 64 KDRLHALAVAEGK--------VASPVPQVLFICVHNAGRSQIASALLSHYAGSS--VEVRSAGSLPASEIHPLVLEILSE 133 (213)
T ss_dssp HHHHHHHHHHTTC--------SSSCCCEEEEEESSSSSHHHHHHHHHHHHHGGG--CEEEEEESSCCSSCCHHHHHHHHH
T ss_pred HHHHHHHHhhcCc--------ccCCCCEEEEECCCchhHHHHHHHHHHHhccCc--eEEEecccCCCCCCCHHHHHHHHH
Confidence 4566666655542 2335789999999995 34456666543332 333222222222256789999999
Q ss_pred CCCCeEEeCCCCCchHHHHHHHhccCCEEEEEecceeeecccccccccccCCCccccCC-CCCCCCCcHHHHH
Q 024345 180 HGIPYHYLCAKENEREEELLELVQNTDFLVLARYMQVNRIRLYVAQLFSCLVTEQLTVL-NSSLGGINISLSS 251 (269)
Q Consensus 180 ~gIP~~~~~~~~~~~e~~l~~~l~~~Dlivla~y~~il~l~~~~~~~iN~~~~~iHpSL-LP~~rG~~p~~~A 251 (269)
+||++.....+. -+++ .++.+|+|+...-... ...++++.+. |-.+ =|.|+|...+..+
T Consensus 134 ~Gidis~~~sr~--l~~~---~~~~~DlIitMd~~~~--~P~~~gk~~~------~w~IpDPy~~~~~~F~~v 193 (213)
T 3t38_A 134 RGVNISDAFPKP--LTDD---VIRASDYVITMGCGDV--CPMYPGKHYL------DWELADPSDEGEDKIQEI 193 (213)
T ss_dssp TTCCCTTCCCCB--CCHH---HHHHCSEEEESSCCSC--SCCCSSSEEE------ESCC-----CCCCCHHHH
T ss_pred cCCCcccCcCCc--CCHH---HhccCCEEEEecCccc--CccccCCccC------CCCCCCCCCCCHHHHHHH
Confidence 999864222221 1111 1236899999865544 2333433222 3222 2556665555444
No 66
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=85.34 E-value=2.1 Score=38.75 Aligned_cols=74 Identities=23% Similarity=0.264 Sum_probs=43.6
Q ss_pred CCeeEEEEEeCC-chHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHh--c
Q 024345 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELV--Q 203 (269)
Q Consensus 127 ~~~riav~~Sg~-g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l--~ 203 (269)
+++||+++|+|. |..+...+... .+ ..++++|+... ++....++|+++|++... ..-+++++.. .
T Consensus 3 ~~irVaIIG~G~iG~~~~~~l~~~-~~--~~elvav~d~~---~~~~~~~~a~~~g~~~~~------~~~e~ll~~~~~~ 70 (312)
T 1nvm_B 3 QKLKVAIIGSGNIGTDLMIKVLRN-AK--YLEMGAMVGID---AASDGLARAQRMGVTTTY------AGVEGLIKLPEFA 70 (312)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHH-CS--SEEEEEEECSC---TTCHHHHHHHHTTCCEES------SHHHHHHHSGGGG
T ss_pred CCCEEEEEcCcHHHHHHHHHHHhh-Cc--CeEEEEEEeCC---hhhhHHHHHHHcCCCccc------CCHHHHHhccCCC
Confidence 468999999887 33333333210 12 36777766644 344467889999998543 1112344431 2
Q ss_pred cCCEEEEEe
Q 024345 204 NTDFLVLAR 212 (269)
Q Consensus 204 ~~Dlivla~ 212 (269)
++|+++.+-
T Consensus 71 ~iDvV~~at 79 (312)
T 1nvm_B 71 DIDFVFDAT 79 (312)
T ss_dssp GEEEEEECS
T ss_pred CCcEEEECC
Confidence 678888764
No 67
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=85.13 E-value=1.7 Score=38.86 Aligned_cols=70 Identities=16% Similarity=0.203 Sum_probs=41.8
Q ss_pred CeeEEEEEeCCc-hHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhc--c
Q 024345 128 KYKVAVLASKQE-HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ--N 204 (269)
Q Consensus 128 ~~riav~~Sg~g-~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~--~ 204 (269)
++||+|+|.|.- ......+.. .+...+++++|.... ...+.++|+++|+|-.+-+ +.++++ +
T Consensus 2 ~~rigiiG~G~ig~~~~~~l~~--~~~~~~~l~av~d~~----~~~a~~~a~~~~~~~~~~~---------~~~ll~~~~ 66 (334)
T 3ohs_X 2 ALRWGIVSVGLISSDFTAVLQT--LPRSEHQVVAVAARD----LSRAKEFAQKHDIPKAYGS---------YEELAKDPN 66 (334)
T ss_dssp CEEEEEECCSHHHHHHHHHHTT--SCTTTEEEEEEECSS----HHHHHHHHHHHTCSCEESS---------HHHHHHCTT
T ss_pred ccEEEEECchHHHHHHHHHHHh--CCCCCeEEEEEEcCC----HHHHHHHHHHcCCCcccCC---------HHHHhcCCC
Confidence 579999999873 332222221 121135787765533 3457889999999854421 223444 6
Q ss_pred CCEEEEEe
Q 024345 205 TDFLVLAR 212 (269)
Q Consensus 205 ~Dlivla~ 212 (269)
+|+++++-
T Consensus 67 vD~V~i~t 74 (334)
T 3ohs_X 67 VEVAYVGT 74 (334)
T ss_dssp CCEEEECC
T ss_pred CCEEEECC
Confidence 88888764
No 68
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=85.06 E-value=1.9 Score=39.15 Aligned_cols=70 Identities=11% Similarity=0.151 Sum_probs=41.3
Q ss_pred CCeeEEEEEeCC-ch-HHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhc-
Q 024345 127 PKYKVAVLASKQ-EH-CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ- 203 (269)
Q Consensus 127 ~~~riav~~Sg~-g~-~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~- 203 (269)
.++||+|+|.|. |. -+..+... .+ .+++++|+... ...+.++++++|++..... + +.++++
T Consensus 22 ~~~rvgiIG~G~~g~~~~~~l~~~--~~--~~~lvav~d~~----~~~~~~~a~~~g~~~~~~~----~----~~~ll~~ 85 (357)
T 3ec7_A 22 MTLKAGIVGIGMIGSDHLRRLANT--VS--GVEVVAVCDIV----AGRAQAALDKYAIEAKDYN----D----YHDLIND 85 (357)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT--CT--TEEEEEEECSS----TTHHHHHHHHHTCCCEEES----S----HHHHHHC
T ss_pred CeeeEEEECCcHHHHHHHHHHHhh--CC--CcEEEEEEeCC----HHHHHHHHHHhCCCCeeeC----C----HHHHhcC
Confidence 468999999987 32 23333311 12 36777765543 3457888999997443332 1 223444
Q ss_pred -cCCEEEEEe
Q 024345 204 -NTDFLVLAR 212 (269)
Q Consensus 204 -~~Dlivla~ 212 (269)
++|+++++.
T Consensus 86 ~~~D~V~i~t 95 (357)
T 3ec7_A 86 KDVEVVIITA 95 (357)
T ss_dssp TTCCEEEECS
T ss_pred CCCCEEEEcC
Confidence 578887764
No 69
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=84.85 E-value=1.6 Score=40.21 Aligned_cols=75 Identities=12% Similarity=0.124 Sum_probs=43.0
Q ss_pred CCCCeeEEEEEeCCc-h-HHHHHHHhhh-cCCC--CceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHH
Q 024345 125 IDPKYKVAVLASKQE-H-CLVDFLYGWQ-EGKL--PVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELL 199 (269)
Q Consensus 125 ~~~~~riav~~Sg~g-~-~l~~ll~~~~-~g~l--~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~ 199 (269)
...|+||||+|.|.- . -+.++...-. ...+ .++|++|+... ...+.++|+++|+|-.+-+ +-
T Consensus 23 Ms~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~----~~~a~~~a~~~~~~~~y~d---------~~ 89 (412)
T 4gqa_A 23 MSARLNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQD----QAMAERHAAKLGAEKAYGD---------WR 89 (412)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSS----HHHHHHHHHHHTCSEEESS---------HH
T ss_pred ccccceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCC----HHHHHHHHHHcCCCeEECC---------HH
Confidence 346799999999873 2 2333322100 1111 25777665432 3567889999999865522 22
Q ss_pred HHhc--cCCEEEEEe
Q 024345 200 ELVQ--NTDFLVLAR 212 (269)
Q Consensus 200 ~~l~--~~Dlivla~ 212 (269)
++|+ ++|+|+++.
T Consensus 90 ~ll~~~~vD~V~I~t 104 (412)
T 4gqa_A 90 ELVNDPQVDVVDITS 104 (412)
T ss_dssp HHHHCTTCCEEEECS
T ss_pred HHhcCCCCCEEEECC
Confidence 3444 678887754
No 70
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=83.72 E-value=3.6 Score=31.93 Aligned_cols=72 Identities=15% Similarity=0.245 Sum_probs=43.2
Q ss_pred CCCCeeEEEEEeCC-chHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHh-
Q 024345 125 IDPKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELV- 202 (269)
Q Consensus 125 ~~~~~riav~~Sg~-g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l- 202 (269)
.+.+.+|+|+|.|. |..+-..|.. .| .+++++=.|+ ...+.+++.|+++.+-+.. +.+.++..
T Consensus 4 ~~~~~~viIiG~G~~G~~la~~L~~--~g---~~v~vid~~~------~~~~~~~~~g~~~i~gd~~----~~~~l~~a~ 68 (140)
T 3fwz_A 4 VDICNHALLVGYGRVGSLLGEKLLA--SD---IPLVVIETSR------TRVDELRERGVRAVLGNAA----NEEIMQLAH 68 (140)
T ss_dssp CCCCSCEEEECCSHHHHHHHHHHHH--TT---CCEEEEESCH------HHHHHHHHTTCEEEESCTT----SHHHHHHTT
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHH--CC---CCEEEEECCH------HHHHHHHHcCCCEEECCCC----CHHHHHhcC
Confidence 34557899999987 5555444442 34 4555443333 2356667789998875532 23344433
Q ss_pred -ccCCEEEEE
Q 024345 203 -QNTDFLVLA 211 (269)
Q Consensus 203 -~~~Dlivla 211 (269)
+++|++|++
T Consensus 69 i~~ad~vi~~ 78 (140)
T 3fwz_A 69 LECAKWLILT 78 (140)
T ss_dssp GGGCSEEEEC
T ss_pred cccCCEEEEE
Confidence 378988875
No 71
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=83.00 E-value=4 Score=36.53 Aligned_cols=72 Identities=18% Similarity=0.189 Sum_probs=42.6
Q ss_pred CeeEEEEEeCCchHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhc--cC
Q 024345 128 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ--NT 205 (269)
Q Consensus 128 ~~riav~~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~--~~ 205 (269)
|+||+|+|.|.-.. ..+..+ .+ .+++++|....+......+.++++++|++...+. +.+ ++++ ++
T Consensus 2 ~~rvgiiG~G~~~~--~~~~~l-~~--~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~~~----~~~----~ll~~~~v 68 (337)
T 3ip3_A 2 SLKICVIGSSGHFR--YALEGL-DE--ECSITGIAPGVPEEDLSKLEKAISEMNIKPKKYN----NWW----EMLEKEKP 68 (337)
T ss_dssp CEEEEEECSSSCHH--HHHTTC-CT--TEEEEEEECSSTTCCCHHHHHHHHTTTCCCEECS----SHH----HHHHHHCC
T ss_pred ceEEEEEccchhHH--HHHHhc-CC--CcEEEEEecCCchhhHHHHHHHHHHcCCCCcccC----CHH----HHhcCCCC
Confidence 58999999975322 334444 22 4788888875421122356677788898544332 222 3343 68
Q ss_pred CEEEEEe
Q 024345 206 DFLVLAR 212 (269)
Q Consensus 206 Dlivla~ 212 (269)
|.++++.
T Consensus 69 D~V~I~t 75 (337)
T 3ip3_A 69 DILVINT 75 (337)
T ss_dssp SEEEECS
T ss_pred CEEEEeC
Confidence 8888764
No 72
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=82.86 E-value=3.9 Score=37.62 Aligned_cols=72 Identities=13% Similarity=0.089 Sum_probs=43.6
Q ss_pred CCeeEEEEEeCC----ch-HHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCC--eEEeCCCCCchHHHHH
Q 024345 127 PKYKVAVLASKQ----EH-CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP--YHYLCAKENEREEELL 199 (269)
Q Consensus 127 ~~~riav~~Sg~----g~-~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP--~~~~~~~~~~~e~~l~ 199 (269)
+++||+|+|.|. |. -+.++.. .+ .+++++++++++ .....++|+++|+| -.+- +.+ +++
T Consensus 11 ~~~rvgiiG~G~~~~ig~~h~~~~~~---~~--~~~lva~v~d~~---~~~a~~~a~~~g~~~~~~~~-----~~~-~ll 76 (398)
T 3dty_A 11 QPIRWAMVGGGSQSQIGYIHRCAALR---DN--TFVLVAGAFDID---PIRGSAFGEQLGVDSERCYA-----DYL-SMF 76 (398)
T ss_dssp SCEEEEEEECCTTCSSHHHHHHHHHG---GG--SEEEEEEECCSS---HHHHHHHHHHTTCCGGGBCS-----SHH-HHH
T ss_pred CcceEEEEcCCccchhHHHHHHHHhh---CC--CeEEEEEEeCCC---HHHHHHHHHHhCCCcceeeC-----CHH-HHH
Confidence 468999999997 22 2233322 22 267887677662 35678889999997 3321 222 344
Q ss_pred HHh----ccCCEEEEEe
Q 024345 200 ELV----QNTDFLVLAR 212 (269)
Q Consensus 200 ~~l----~~~Dlivla~ 212 (269)
+.- .++|+|+++.
T Consensus 77 ~~~~~~~~~vD~V~i~t 93 (398)
T 3dty_A 77 EQEARRADGIQAVSIAT 93 (398)
T ss_dssp HHHTTCTTCCSEEEEES
T ss_pred hcccccCCCCCEEEECC
Confidence 331 1488888764
No 73
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=82.73 E-value=1.9 Score=39.64 Aligned_cols=68 Identities=18% Similarity=0.155 Sum_probs=41.9
Q ss_pred CCeeEEEEEeC-Cc--hHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhc
Q 024345 127 PKYKVAVLASK-QE--HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 203 (269)
Q Consensus 127 ~~~riav~~Sg-~g--~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~ 203 (269)
+++||+|+|.| .. .-+..+.. .+ .+++++|+... .....++|+++|+|++. + +-++++
T Consensus 1 ~~~rigiiG~G~~~~~~~~~~l~~---~~--~~~l~av~d~~----~~~~~~~a~~~g~~~~~------~----~~ell~ 61 (387)
T 3moi_A 1 MKIRFGICGLGFAGSVLMAPAMRH---HP--DAQIVAACDPN----EDVRERFGKEYGIPVFA------T----LAEMMQ 61 (387)
T ss_dssp CCEEEEEECCSHHHHTTHHHHHHH---CT--TEEEEEEECSC----HHHHHHHHHHHTCCEES------S----HHHHHH
T ss_pred CceEEEEEeCCHHHHHHHHHHHHh---CC--CeEEEEEEeCC----HHHHHHHHHHcCCCeEC------C----HHHHHc
Confidence 36899999999 42 23344332 22 36787766543 34567889999999542 1 223343
Q ss_pred --cCCEEEEEec
Q 024345 204 --NTDFLVLARY 213 (269)
Q Consensus 204 --~~Dlivla~y 213 (269)
++|+++++--
T Consensus 62 ~~~vD~V~i~tp 73 (387)
T 3moi_A 62 HVQMDAVYIASP 73 (387)
T ss_dssp HSCCSEEEECSC
T ss_pred CCCCCEEEEcCC
Confidence 6888887643
No 74
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=82.68 E-value=4.2 Score=36.98 Aligned_cols=70 Identities=10% Similarity=0.098 Sum_probs=41.5
Q ss_pred CCeeEEEEEeCCchHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhc--c
Q 024345 127 PKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ--N 204 (269)
Q Consensus 127 ~~~riav~~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~--~ 204 (269)
+++||+|+|.|..+.. .++...+.+ .+++++|+... ...+.++|+++|++-.+-+ +-++++ +
T Consensus 25 ~~irvgiiG~G~~~~~-~~~~~~~~~--~~~lvav~d~~----~~~a~~~a~~~~~~~~~~~---------~~~ll~~~~ 88 (361)
T 3u3x_A 25 DELRFAAVGLNHNHIY-GQVNCLLRA--GARLAGFHEKD----DALAAEFSAVYADARRIAT---------AEEILEDEN 88 (361)
T ss_dssp -CCEEEEECCCSTTHH-HHHHHHHHT--TCEEEEEECSC----HHHHHHHHHHSSSCCEESC---------HHHHHTCTT
T ss_pred cCcEEEEECcCHHHHH-HHHHHhhcC--CcEEEEEEcCC----HHHHHHHHHHcCCCcccCC---------HHHHhcCCC
Confidence 4589999999985421 122222223 37888777643 3457888999986544422 223444 5
Q ss_pred CCEEEEEe
Q 024345 205 TDFLVLAR 212 (269)
Q Consensus 205 ~Dlivla~ 212 (269)
+|+++++.
T Consensus 89 vD~V~I~t 96 (361)
T 3u3x_A 89 IGLIVSAA 96 (361)
T ss_dssp CCEEEECC
T ss_pred CCEEEEeC
Confidence 77777654
No 75
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=82.59 E-value=3.3 Score=37.01 Aligned_cols=69 Identities=16% Similarity=0.271 Sum_probs=41.9
Q ss_pred CCeeEEEEEeCCc-hH-HHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhc-
Q 024345 127 PKYKVAVLASKQE-HC-LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ- 203 (269)
Q Consensus 127 ~~~riav~~Sg~g-~~-l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~- 203 (269)
+++||+|+|.|.- .. +..|.+ .+ ..++++|.... ...+.++++++|+|..+- + +.++++
T Consensus 4 ~~~~igiiG~G~~g~~~~~~l~~---~~--~~~l~av~d~~----~~~~~~~~~~~~~~~~~~-----~----~~~ll~~ 65 (330)
T 3e9m_A 4 DKIRYGIMSTAQIVPRFVAGLRE---SA--QAEVRGIASRR----LENAQKMAKELAIPVAYG-----S----YEELCKD 65 (330)
T ss_dssp CCEEEEECSCCTTHHHHHHHHHH---SS--SEEEEEEBCSS----SHHHHHHHHHTTCCCCBS-----S----HHHHHHC
T ss_pred CeEEEEEECchHHHHHHHHHHHh---CC--CcEEEEEEeCC----HHHHHHHHHHcCCCceeC-----C----HHHHhcC
Confidence 5689999999983 33 333322 12 36777665533 356788899999974331 1 223444
Q ss_pred -cCCEEEEEec
Q 024345 204 -NTDFLVLARY 213 (269)
Q Consensus 204 -~~Dlivla~y 213 (269)
++|+++++--
T Consensus 66 ~~~D~V~i~tp 76 (330)
T 3e9m_A 66 ETIDIIYIPTY 76 (330)
T ss_dssp TTCSEEEECCC
T ss_pred CCCCEEEEcCC
Confidence 6788877643
No 76
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=82.32 E-value=8.5 Score=35.01 Aligned_cols=103 Identities=13% Similarity=0.140 Sum_probs=57.0
Q ss_pred CCeeEEEEEeCCchHHHHHHHhhhcCCCCceEEEEeeCCCCC-CChhHH----HHHHhCCCCeEEeCCCCCchHHHHHHH
Q 024345 127 PKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRG-PNSHVI----RFLERHGIPYHYLCAKENEREEELLEL 201 (269)
Q Consensus 127 ~~~riav~~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~-~~~~v~----~~a~~~gIP~~~~~~~~~~~e~~l~~~ 201 (269)
...||+++|-+.......++..+.. ++.++. ++.|+.. |+..+. +.|++.|..+.... ++.+.
T Consensus 147 ~gl~va~vGD~~~rva~Sl~~~~~~--~g~~v~--~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~--------d~~ea 214 (307)
T 2i6u_A 147 RGLRLSYFGDGANNMAHSLLLGGVT--AGIHVT--VAAPEGFLPDPSVRAAAERRAQDTGASVTVTA--------DAHAA 214 (307)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHHH--TTCEEE--EECCTTSCCCHHHHHHHHHHHHHHTCCEEEES--------CHHHH
T ss_pred CCeEEEEECCCCcCcHHHHHHHHHH--CCCEEE--EECCccccCCHHHHHHHHHHHHHcCCeEEEEE--------CHHHH
Confidence 4578999888733333333333211 235543 4444332 333344 44558888776653 23356
Q ss_pred hccCCEEEEEecce-----------------eee---cccccccccccCCCccccCCCCCCCCCcHH
Q 024345 202 VQNTDFLVLARYMQ-----------------VNR---IRLYVAQLFSCLVTEQLTVLNSSLGGINIS 248 (269)
Q Consensus 202 l~~~Dlivla~y~~-----------------il~---l~~~~~~~iN~~~~~iHpSLLP~~rG~~p~ 248 (269)
++++|+|.+-.|-+ .+. ++..+..++= .|| ||.+||...-
T Consensus 215 v~~aDvvy~~~w~smg~~~~~~~~~~~~~~y~v~~~~l~~a~~~ai~-----mH~--lP~~Rg~EI~ 274 (307)
T 2i6u_A 215 AAGADVLVTDTWTSMGQENDGLDRVKPFRPFQLNSRLLALADSDAIV-----LHC--LPAHRGDEIT 274 (307)
T ss_dssp HTTCSEEEECCSSCTTCTTSCCCSSGGGGGGCBCHHHHHHSCTTCEE-----EEC--SCCCBTTTBC
T ss_pred hcCCCEEEecceecCCcccchHHHHHHHhhcCCCHHHHhhcCCCcEE-----ECC--CCCCCCcccC
Confidence 67999999977711 111 3333334555 887 8999995433
No 77
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=81.87 E-value=5.7 Score=35.35 Aligned_cols=70 Identities=9% Similarity=0.144 Sum_probs=40.8
Q ss_pred CCCeeEEEEEeCC-chH-HHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhc
Q 024345 126 DPKYKVAVLASKQ-EHC-LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 203 (269)
Q Consensus 126 ~~~~riav~~Sg~-g~~-l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~ 203 (269)
.+++||+|+|.|. |.. ++.+.+. .+ .+++++|+... .....++++++|+|..+-+ +.++++
T Consensus 6 ~~~~~v~iiG~G~ig~~~~~~l~~~--~~--~~~~vav~d~~----~~~~~~~a~~~g~~~~~~~---------~~~~l~ 68 (346)
T 3cea_A 6 RKPLRAAIIGLGRLGERHARHLVNK--IQ--GVKLVAACALD----SNQLEWAKNELGVETTYTN---------YKDMID 68 (346)
T ss_dssp CCCEEEEEECCSTTHHHHHHHHHHT--CS--SEEEEEEECSC----HHHHHHHHHTTCCSEEESC---------HHHHHT
T ss_pred CCcceEEEEcCCHHHHHHHHHHHhc--CC--CcEEEEEecCC----HHHHHHHHHHhCCCcccCC---------HHHHhc
Confidence 4678999999987 333 2333211 12 36777665433 3456678889998744311 223344
Q ss_pred --cCCEEEEEe
Q 024345 204 --NTDFLVLAR 212 (269)
Q Consensus 204 --~~Dlivla~ 212 (269)
++|+++.+.
T Consensus 69 ~~~~D~V~i~t 79 (346)
T 3cea_A 69 TENIDAIFIVA 79 (346)
T ss_dssp TSCCSEEEECS
T ss_pred CCCCCEEEEeC
Confidence 578777664
No 78
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=81.63 E-value=4.6 Score=36.17 Aligned_cols=69 Identities=12% Similarity=0.130 Sum_probs=40.7
Q ss_pred CeeEEEEEeCC-ch-HHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhc--
Q 024345 128 KYKVAVLASKQ-EH-CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ-- 203 (269)
Q Consensus 128 ~~riav~~Sg~-g~-~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~-- 203 (269)
++||+|+|.|. |. -+..+.+. .+ .+++++|.... ...+.++++++||+..... + +.++++
T Consensus 2 ~~rigiIG~G~~g~~~~~~l~~~--~~--~~~l~av~d~~----~~~~~~~~~~~g~~~~~~~----~----~~~ll~~~ 65 (344)
T 3mz0_A 2 SLRIGVIGTGAIGKEHINRITNK--LS--GAEIVAVTDVN----QEAAQKVVEQYQLNATVYP----N----DDSLLADE 65 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT--CS--SEEEEEEECSS----HHHHHHHHHHTTCCCEEES----S----HHHHHHCT
T ss_pred eEEEEEECccHHHHHHHHHHHhh--CC--CcEEEEEEcCC----HHHHHHHHHHhCCCCeeeC----C----HHHHhcCC
Confidence 47999999987 32 22333211 12 36777665432 3457888999997544332 1 223444
Q ss_pred cCCEEEEEe
Q 024345 204 NTDFLVLAR 212 (269)
Q Consensus 204 ~~Dlivla~ 212 (269)
++|+++++.
T Consensus 66 ~~D~V~i~t 74 (344)
T 3mz0_A 66 NVDAVLVTS 74 (344)
T ss_dssp TCCEEEECS
T ss_pred CCCEEEECC
Confidence 588888764
No 79
>1rwu_A Hypothetical UPF0250 protein YBED; mixed alpha-beta fold, structural genomics, protein structure initiative, PSI; NMR {Escherichia coli} SCOP: d.58.54.1
Probab=81.43 E-value=6.8 Score=30.40 Aligned_cols=69 Identities=13% Similarity=0.042 Sum_probs=50.3
Q ss_pred CCCCcceEEEEEEcCCCcChHHHHHHHHHhC---CCeEeEeeeeccCCCCeEE-EEEEEEeCCCCCCHHHHHHHHHhhhh
Q 024345 36 VSPTLTHGIHVFHCPDEVGIVAKLSECIASR---GGNILAADVFVPEKKNVFY-SRSEFIFDPIKWPREQMDEDFFKLSK 111 (269)
Q Consensus 36 ~~~~~~~~iItV~G~DrpGIVa~VS~~La~~---giNI~dl~~~~~~~~g~F~-m~~~v~~p~~~~~~~~L~e~L~~la~ 111 (269)
.-..+..+.+.|+|.+.++.+++|..++.++ +..+ ..+ .+.+|.|. ..+.+.+. +.+++.+-.++|.+
T Consensus 30 lieFPc~y~~KvIG~a~~~~~~~V~~vv~~~~p~d~~~-~~r---~Ss~GkY~Svtv~v~v~----S~eQv~aiY~~L~~ 101 (109)
T 1rwu_A 30 LLEFPTPFTYKVMGQALPELVDQVVEVVQRHAPGDYTP-TVK---PSSKGNYHSVSITINAT----HIEQVETLYEELGK 101 (109)
T ss_dssp SSCCCCCEEEEEEEECCTTHHHHHHHHHHHHSSSCCCE-EEE---ESSCSSEEEEEEEECCS----SHHHHHHHHHHHSC
T ss_pred hccCCCCceEEEEEECcHHHHHHHHHHHHHhCCCCCCc-eec---CCCCCeEEEEEEEEEEC----CHHHHHHHHHHHhc
Confidence 4456678999999999999999999999988 6665 222 24468876 45555543 57888888877764
Q ss_pred h
Q 024345 112 M 112 (269)
Q Consensus 112 e 112 (269)
.
T Consensus 102 ~ 102 (109)
T 1rwu_A 102 I 102 (109)
T ss_dssp S
T ss_pred C
Confidence 3
No 80
>3a06_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; MEP pathway, isoprene biosynthesis, metal- NADP, oxidoreductase; HET: NDP; 2.00A {Thermotoga maritima} PDB: 3a14_A*
Probab=81.41 E-value=3.2 Score=39.04 Aligned_cols=76 Identities=9% Similarity=0.138 Sum_probs=49.5
Q ss_pred eeEEEEEe-CC-chHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCC-Cc--------hHHH
Q 024345 129 YKVAVLAS-KQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKE-NE--------REEE 197 (269)
Q Consensus 129 ~riav~~S-g~-g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~-~~--------~e~~ 197 (269)
+||+|+|| |+ |.+-.+++... . .++++++.+++ .-....+.|++++..++.+.... .. -++.
T Consensus 4 k~i~ILGsTGSIG~~tldVi~~~--~--~~~vvaL~a~~---n~~~l~~q~~~f~p~~v~v~~~~~~~~~l~~~~~G~~~ 76 (376)
T 3a06_A 4 RTLVILGATGSIGTQTLDVLKKV--K--GIRLIGISFHS---NLELAFKIVKEFNVKNVAITGDVEFEDSSINVWKGSHS 76 (376)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHS--C--SEEEEEEEESS---CHHHHHHHHHHHTCCEEEECSSCCCCCSSSEEEESTTH
T ss_pred ceEEEECCCCHHHHHHHHHHHhC--C--CeEEEEEEccC---CHHHHHHHHHHcCCCEEEEccHHHHHHHHHHHccCHHH
Confidence 79999996 65 55544555542 2 37999988866 33567888999998887654221 10 1234
Q ss_pred HHHHhc--cCCEEEEE
Q 024345 198 LLELVQ--NTDFLVLA 211 (269)
Q Consensus 198 l~~~l~--~~Dlivla 211 (269)
+.+++. ++|+++.|
T Consensus 77 l~el~~~~~~D~Vv~A 92 (376)
T 3a06_A 77 IEEMLEALKPDITMVA 92 (376)
T ss_dssp HHHHHHHHCCSEEEEC
T ss_pred HHHHhcCCCCCEEEEE
Confidence 556665 68888876
No 81
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=80.92 E-value=2.8 Score=37.47 Aligned_cols=68 Identities=18% Similarity=0.235 Sum_probs=37.2
Q ss_pred CCeeEEEEEeCCc-hH-HHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhc-
Q 024345 127 PKYKVAVLASKQE-HC-LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ- 203 (269)
Q Consensus 127 ~~~riav~~Sg~g-~~-l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~- 203 (269)
+++||+|+|.|.- .. +..+.. .+ ..++++|....+ ..+.++|+++|+|-.+-+ +.++++
T Consensus 4 ~~~rigiiG~G~ig~~~~~~l~~---~~--~~~~~av~d~~~----~~~~~~a~~~~~~~~~~~---------~~~ll~~ 65 (329)
T 3evn_A 4 SKVRYGVVSTAKVAPRFIEGVRL---AG--NGEVVAVSSRTL----ESAQAFANKYHLPKAYDK---------LEDMLAD 65 (329)
T ss_dssp -CEEEEEEBCCTTHHHHHHHHHH---HC--SEEEEEEECSCS----STTCC---CCCCSCEESC---------HHHHHTC
T ss_pred CceEEEEEechHHHHHHHHHHHh---CC--CcEEEEEEcCCH----HHHHHHHHHcCCCcccCC---------HHHHhcC
Confidence 4689999999973 32 333322 23 367887765432 235677888998844311 123444
Q ss_pred -cCCEEEEEe
Q 024345 204 -NTDFLVLAR 212 (269)
Q Consensus 204 -~~Dlivla~ 212 (269)
++|+++++-
T Consensus 66 ~~~D~V~i~t 75 (329)
T 3evn_A 66 ESIDVIYVAT 75 (329)
T ss_dssp TTCCEEEECS
T ss_pred CCCCEEEECC
Confidence 577777653
No 82
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=80.86 E-value=3.4 Score=37.21 Aligned_cols=71 Identities=23% Similarity=0.194 Sum_probs=42.4
Q ss_pred CCCCeeEEEEEeCC--ch-HHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHH
Q 024345 125 IDPKYKVAVLASKQ--EH-CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLEL 201 (269)
Q Consensus 125 ~~~~~riav~~Sg~--g~-~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~ 201 (269)
+..++||+|+|.|. |. -+..+.. .+. .+++++|+... ...+.++|+++|+|-.+-+ +.++
T Consensus 15 ~~~~irvgiIG~G~~~g~~~~~~l~~---~~~-~~~lvav~d~~----~~~~~~~a~~~~~~~~~~~---------~~~l 77 (340)
T 1zh8_A 15 PLRKIRLGIVGCGIAARELHLPALKN---LSH-LFEITAVTSRT----RSHAEEFAKMVGNPAVFDS---------YEEL 77 (340)
T ss_dssp -CCCEEEEEECCSHHHHHTHHHHHHT---TTT-TEEEEEEECSS----HHHHHHHHHHHSSCEEESC---------HHHH
T ss_pred CCCceeEEEEecCHHHHHHHHHHHHh---CCC-ceEEEEEEcCC----HHHHHHHHHHhCCCcccCC---------HHHH
Confidence 45779999999993 33 3344322 111 36787765533 3457788999998655422 2234
Q ss_pred hc--cCCEEEEEe
Q 024345 202 VQ--NTDFLVLAR 212 (269)
Q Consensus 202 l~--~~Dlivla~ 212 (269)
++ ++|+++.+-
T Consensus 78 l~~~~vD~V~i~t 90 (340)
T 1zh8_A 78 LESGLVDAVDLTL 90 (340)
T ss_dssp HHSSCCSEEEECC
T ss_pred hcCCCCCEEEEeC
Confidence 44 578877764
No 83
>1zhv_A Hypothetical protein ATU0741; NESG, ATR8, structural genomics, PSI, protein struc initiative; 1.50A {Agrobacterium tumefaciens str} SCOP: d.58.18.8 d.58.18.8
Probab=80.84 E-value=1.3 Score=35.77 Aligned_cols=60 Identities=18% Similarity=0.204 Sum_probs=42.4
Q ss_pred EEEEEcC---CCcChHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHhhhhhhc
Q 024345 44 IHVFHCP---DEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFN 114 (269)
Q Consensus 44 iItV~G~---DrpGIVa~VS~~La~~giNI~dl~~~~~~~~g~F~m~~~v~~p~~~~~~~~L~e~L~~la~el~ 114 (269)
.|++.|+ |-.||++++|+.|++.||.|--++++.. +. +- +|. .+.++--++|.+.+.++.
T Consensus 64 ~i~v~~~l~~~~vGilA~is~pLA~agIsif~iSty~t---D~----Il--Vp~--~~~~~Ai~aL~~~~~~~~ 126 (134)
T 1zhv_A 64 CFKFQGPFAFDETGIVLSVISPLSTNGIGIFVVSTFDG---DH----LL--VRS--NDLEKTADLLANAGHSLL 126 (134)
T ss_dssp EEEECSCCCCSSCCHHHHHHHHHHTTTCCCEEEECSSC---EE----EE--EEG--GGHHHHHHHHHHTTCEEE
T ss_pred EEEEecCCCccHHHHHHHHHHHHHhCCCCeEEEEeccc---cE----EE--EeH--HHHHHHHHHHHHcCceee
Confidence 6777777 9999999999999999999999988632 21 11 232 245555666666655554
No 84
>3rh0_A Arsenate reductase; oxidoreductase; 1.72A {Corynebacterium glutamicum}
Probab=80.47 E-value=8.9 Score=31.00 Aligned_cols=81 Identities=15% Similarity=0.131 Sum_probs=46.0
Q ss_pred CCCCCeeEEEEEeCCc---hHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHH
Q 024345 124 DIDPKYKVAVLASKQE---HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLE 200 (269)
Q Consensus 124 ~~~~~~riav~~Sg~g---~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~ 200 (269)
.+..++||.|+.+|+- .-.+.+++..-.+. .++.--=+.+...++..+++.++++||++-..-.+. -+++
T Consensus 16 ~~~~~~~VLFVC~gN~cRSpmAEal~~~~~~~~--~~v~SAGt~~g~~~dp~a~~vl~e~Gidis~h~ar~--l~~~--- 88 (148)
T 3rh0_A 16 RGSHMKSVLFVCVGNGGKSQMAAALAQKYASDS--VEIHSAGTKPAQGLNQLSVESIAEVGADMSQGIPKA--IDPE--- 88 (148)
T ss_dssp ----CCEEEEEESSSSSHHHHHHHHHHHHCCTT--SEEEEEESSCCSSCCHHHHHHHHHTTCCCTTCCCCB--CCHH---
T ss_pred CcCCCCEEEEECCCchhHHHHHHHHHHHhcCCC--EEEEecccCCCCCCCHHHHHHHHHcCCCcCCCeeeE--CCHH---
Confidence 3556789999999995 44566666544333 444322222222256789999999999864222211 1111
Q ss_pred HhccCCEEEEE
Q 024345 201 LVQNTDFLVLA 211 (269)
Q Consensus 201 ~l~~~Dlivla 211 (269)
.++++|+|+..
T Consensus 89 ~~~~~DlIitM 99 (148)
T 3rh0_A 89 LLRTVDRVVIL 99 (148)
T ss_dssp HHHHCSEEEEE
T ss_pred HhcCCCEEEEe
Confidence 12368999998
No 85
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=79.98 E-value=2.9 Score=36.81 Aligned_cols=69 Identities=12% Similarity=0.093 Sum_probs=41.4
Q ss_pred CCeeEEEEEeCCc-hH-HHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhcc
Q 024345 127 PKYKVAVLASKQE-HC-LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQN 204 (269)
Q Consensus 127 ~~~riav~~Sg~g-~~-l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~~ 204 (269)
+++||+|+|.|.- .. +...+.. .+ .+++++|.... ...+.++++++|+|. + . +.+ +++ ++
T Consensus 5 ~~~~igiIG~G~~g~~~~~~~l~~--~~--~~~l~av~d~~----~~~~~~~a~~~~~~~-~-~----~~~-~ll---~~ 66 (308)
T 3uuw_A 5 KNIKMGMIGLGSIAQKAYLPILTK--SE--RFEFVGAFTPN----KVKREKICSDYRIMP-F-D----SIE-SLA---KK 66 (308)
T ss_dssp CCCEEEEECCSHHHHHHTHHHHTS--CS--SSEEEEEECSC----HHHHHHHHHHHTCCB-C-S----CHH-HHH---TT
T ss_pred ccCcEEEEecCHHHHHHHHHHHHh--CC--CeEEEEEECCC----HHHHHHHHHHcCCCC-c-C----CHH-HHH---hc
Confidence 3589999999873 32 3332321 12 36777666543 345778899999987 3 1 122 333 37
Q ss_pred CCEEEEEec
Q 024345 205 TDFLVLARY 213 (269)
Q Consensus 205 ~Dlivla~y 213 (269)
+|+++++.-
T Consensus 67 ~D~V~i~tp 75 (308)
T 3uuw_A 67 CDCIFLHSS 75 (308)
T ss_dssp CSEEEECCC
T ss_pred CCEEEEeCC
Confidence 888887643
No 86
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=79.93 E-value=2.7 Score=38.06 Aligned_cols=67 Identities=21% Similarity=0.194 Sum_probs=41.4
Q ss_pred CCeeEEEEEeCCc-h--HHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhc
Q 024345 127 PKYKVAVLASKQE-H--CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 203 (269)
Q Consensus 127 ~~~riav~~Sg~g-~--~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~ 203 (269)
+++||+|+|.|.- . -+..|.+ .+ .+++++|.... ...+.++|+++|+|.+. + +-++++
T Consensus 26 ~~~rigiIG~G~~g~~~~~~~l~~---~~--~~~l~av~d~~----~~~~~~~a~~~g~~~~~-~---------~~~ll~ 86 (350)
T 3rc1_A 26 NPIRVGVIGCADIAWRRALPALEA---EP--LTEVTAIASRR----WDRAKRFTERFGGEPVE-G---------YPALLE 86 (350)
T ss_dssp CCEEEEEESCCHHHHHTHHHHHHH---CT--TEEEEEEEESS----HHHHHHHHHHHCSEEEE-S---------HHHHHT
T ss_pred CceEEEEEcCcHHHHHHHHHHHHh---CC--CeEEEEEEcCC----HHHHHHHHHHcCCCCcC-C---------HHHHhc
Confidence 4689999999873 2 2333332 22 36787776543 34577889999998762 2 223443
Q ss_pred --cCCEEEEEe
Q 024345 204 --NTDFLVLAR 212 (269)
Q Consensus 204 --~~Dlivla~ 212 (269)
++|+++++-
T Consensus 87 ~~~~D~V~i~t 97 (350)
T 3rc1_A 87 RDDVDAVYVPL 97 (350)
T ss_dssp CTTCSEEEECC
T ss_pred CCCCCEEEECC
Confidence 577777653
No 87
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=79.92 E-value=3 Score=37.34 Aligned_cols=67 Identities=13% Similarity=0.184 Sum_probs=39.7
Q ss_pred CCeeEEEEEeCC-chH-HHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhc-
Q 024345 127 PKYKVAVLASKQ-EHC-LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ- 203 (269)
Q Consensus 127 ~~~riav~~Sg~-g~~-l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~- 203 (269)
.++||+|+|.|. |.. +..|.. .+ .+++++|.... ...+.++++++|++++. + +.++++
T Consensus 3 ~~~rvgiiG~G~~g~~~~~~l~~---~~--~~~l~av~d~~----~~~~~~~a~~~g~~~~~------~----~~~~l~~ 63 (344)
T 3euw_A 3 LTLRIALFGAGRIGHVHAANIAA---NP--DLELVVIADPF----IEGAQRLAEANGAEAVA------S----PDEVFAR 63 (344)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH---CT--TEEEEEEECSS----HHHHHHHHHTTTCEEES------S----HHHHTTC
T ss_pred CceEEEEECCcHHHHHHHHHHHh---CC--CcEEEEEECCC----HHHHHHHHHHcCCceeC------C----HHHHhcC
Confidence 468999999987 333 233222 22 36777665433 34567888999954431 1 224454
Q ss_pred -cCCEEEEEe
Q 024345 204 -NTDFLVLAR 212 (269)
Q Consensus 204 -~~Dlivla~ 212 (269)
++|+++++-
T Consensus 64 ~~~D~V~i~t 73 (344)
T 3euw_A 64 DDIDGIVIGS 73 (344)
T ss_dssp SCCCEEEECS
T ss_pred CCCCEEEEeC
Confidence 678777764
No 88
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=79.75 E-value=5 Score=37.67 Aligned_cols=61 Identities=15% Similarity=0.108 Sum_probs=45.0
Q ss_pred eEEEEEEcC---CCcChHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHhhhhhhcc
Q 024345 42 HGIHVFHCP---DEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNA 115 (269)
Q Consensus 42 ~~iItV~G~---DrpGIVa~VS~~La~~giNI~dl~~~~~~~~g~F~m~~~v~~p~~~~~~~~L~e~L~~la~el~l 115 (269)
-..++|+|. ++||+.+++.+.|++.|+||.-+++. .-.+.+.++ .++..++++.|-+.|.+
T Consensus 344 ~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~is~S------e~~is~vV~-------~~d~~~Av~~Lh~~f~~ 407 (421)
T 3ab4_A 344 VGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIELISTS------EIRISVLIR-------EDDLDAAARALHEQFQL 407 (421)
T ss_dssp EEEEEEECGGGTSCTTHHHHHHHHHHHTTCCCCEEEEE------TTEEEEEEE-------GGGHHHHHHHHHHHTTC
T ss_pred eEEEEEEccCcccCccHHHHHHHHHHHCCCCEEEEEcC------CCeEEEEEe-------HHHHHHHHHHHHHHHhc
Confidence 345899997 89999999999999999999966542 113333333 35577788888888865
No 89
>1phz_A Protein (phenylalanine hydroxylase); aromatic amino acid hydroxylase, phosphorylation, intrasteric regulation, allosteric regulation; 2.20A {Rattus norvegicus} SCOP: d.58.18.3 d.178.1.1 PDB: 2phm_A
Probab=79.75 E-value=3.2 Score=39.66 Aligned_cols=67 Identities=13% Similarity=0.075 Sum_probs=45.5
Q ss_pred eEEEEEEcCCCcChHHHHHHHHHhCCCeEeEeeeeccC-CCCeEEEEEEEEeCCCCCCHHHHHHHHHhhhhh
Q 024345 42 HGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPE-KKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKM 112 (269)
Q Consensus 42 ~~iItV~G~DrpGIVa~VS~~La~~giNI~dl~~~~~~-~~g~F~m~~~v~~p~~~~~~~~L~e~L~~la~e 112 (269)
+..|.+.-+|+||-.+++=+.++.+|||+..+.+.... ..+.|..-+.++ . .+-+.++++|++|...
T Consensus 34 KTSLiFsl~n~pGAL~~~L~~Fa~~gINLTkIESRPsk~~~~eY~FfVD~e-h---~~d~~v~~AL~eL~~~ 101 (429)
T 1phz_A 34 AISLIFSLKEEVGALAKVLRLFEENDINLTHIESRPSRLNKDEYEFFTYLD-K---RTKPVLGSIIKSLRND 101 (429)
T ss_dssp CEEEEEEEECCTTHHHHHHHHHHTTTCCTTSEEEEECSSCTTEEEEEECBC-G---GGHHHHHHHHHHHHHT
T ss_pred eEEEEEEeCCCccHHHHHHHHHHHcCCceEEEEeeecCCCCccEEEEEEEe-e---CCCHHHHHHHHHHHhh
Confidence 34444444789999999999999999999999997432 234444334333 1 1345588888887655
No 90
>3mah_A Aspartokinase; aspartate kinase, structural genomics, MCSG, transferase, PSI-2; 2.31A {Porphyromonas gingivalis}
Probab=79.61 E-value=3.5 Score=33.19 Aligned_cols=91 Identities=8% Similarity=-0.033 Sum_probs=52.5
Q ss_pred ceEEEEEEcC---CCcChHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHhhhhhhccce
Q 024345 41 THGIHVFHCP---DEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMR 117 (269)
Q Consensus 41 ~~~iItV~G~---DrpGIVa~VS~~La~~giNI~dl~~~~~~~~g~F~m~~~v~~p~~~~~~~~L~e~L~~la~el~l~~ 117 (269)
.-..|++.|. |+||+.+++-+.|+++|+||.-+++.. . .+.+.+++ . + .+.+.++++.+ +. .
T Consensus 17 ~va~Iti~~~~m~~~~g~~~~if~~La~~~I~vd~I~~s~----~----~Isf~v~~-~-~--~~~~il~~l~~-~~--~ 81 (157)
T 3mah_A 17 GITVIKVKSSNKLLSWHFMRKLFEIFEFYQEPVDMVATSE----V----GVSLTIDN-D-K--NLPDIVRALSD-IG--D 81 (157)
T ss_dssp EEEEEEEEECTTSCHHHHHHHHHHHHHHTTCCCSCEECCS----S----EEEEEESC-C-T--THHHHHHHHTT-TE--E
T ss_pred CEEEEEEEeCCCCCchhHHHHHHHHHHHcCCCEEEEEecC----C----EEEEEECC-h-H--HHHHHHHHHhc-cC--e
Confidence 4557888854 889999999999999999998887731 1 34455554 2 2 34555555543 21 1
Q ss_pred eeeeecCCCCCeeEEEEEeCCc---hHHHHHHHhhh
Q 024345 118 SVVRVPDIDPKYKVAVLASKQE---HCLVDFLYGWQ 150 (269)
Q Consensus 118 ~~~~~~~~~~~~riav~~Sg~g---~~l~~ll~~~~ 150 (269)
..+ .+.--+|.+.|.|=. ..+..++....
T Consensus 82 v~~----~~~~a~vsvvG~gm~~~~gv~a~~f~aL~ 113 (157)
T 3mah_A 82 VTV----DKDMVIICIVGDMEWDNVGFEARIINALK 113 (157)
T ss_dssp EEE----EEEEEEEEEEC------CCHHHHHHHTTT
T ss_pred EEE----eCCeEEEEEECCCcccCccHHHHHHHHhC
Confidence 111 123356777766531 23344555443
No 91
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=79.13 E-value=11 Score=34.44 Aligned_cols=102 Identities=11% Similarity=0.176 Sum_probs=56.7
Q ss_pred CCeeEEEEEeCCchHHHHHHHhhhcCCCCceEEEEeeCCCCC-CChhHH----HHHHhCCCCeEEeCCCCCchHHHHHHH
Q 024345 127 PKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRG-PNSHVI----RFLERHGIPYHYLCAKENEREEELLEL 201 (269)
Q Consensus 127 ~~~riav~~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~-~~~~v~----~~a~~~gIP~~~~~~~~~~~e~~l~~~ 201 (269)
...||+++|-+ ......++..+.. ++.++. ++.|+.. |+..+. +.|++.|..+.... ++.+.
T Consensus 154 ~gl~va~vGD~-~rva~Sl~~~~~~--~g~~v~--~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~--------d~~ea 220 (315)
T 1pvv_A 154 KGVKVVYVGDG-NNVAHSLMIAGTK--LGADVV--VATPEGYEPDEKVIKWAEQNAAESGGSFELLH--------DPVKA 220 (315)
T ss_dssp TTCEEEEESCC-CHHHHHHHHHHHH--TTCEEE--EECCTTCCCCHHHHHHHHHHHHHHTCEEEEES--------CHHHH
T ss_pred CCcEEEEECCC-cchHHHHHHHHHH--CCCEEE--EECCccccCCHHHHHHHHHHHHHcCCeEEEEe--------CHHHH
Confidence 45789998887 3333333333211 234543 4444332 333344 44558887766543 23356
Q ss_pred hccCCEEEEEecc-----------------eeee---cccccccccccCCCccccCCCCCCCCCcHH
Q 024345 202 VQNTDFLVLARYM-----------------QVNR---IRLYVAQLFSCLVTEQLTVLNSSLGGINIS 248 (269)
Q Consensus 202 l~~~Dlivla~y~-----------------~il~---l~~~~~~~iN~~~~~iHpSLLP~~rG~~p~ 248 (269)
++++|+|.+-.|- +.+. ++..+..++= .|| ||.+||...-
T Consensus 221 v~~aDvvy~~~w~smg~~~~~~~~~~~~~~y~v~~ell~~a~~~ai~-----mH~--lP~~Rg~EI~ 280 (315)
T 1pvv_A 221 VKDADVIYTDVWASMGQEAEAEERRKIFRPFQVNKDLVKHAKPDYMF-----MHC--LPAHRGEEVT 280 (315)
T ss_dssp TTTCSEEEECCCCCSSTTSSSSHHHHHHGGGCBCHHHHHTSCTTCEE-----EEC--SCCCBTTTBC
T ss_pred hCCCCEEEEcceeccCcccchHHHHHHHHhcCCCHHHHhhcCCCcEE-----ECC--CCCCCCCccC
Confidence 6799999997772 1112 3333445566 887 8999985433
No 92
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=79.04 E-value=2.8 Score=35.33 Aligned_cols=72 Identities=11% Similarity=0.102 Sum_probs=43.4
Q ss_pred CeeEEEEEeCC-chHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhccCC
Q 024345 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTD 206 (269)
Q Consensus 128 ~~riav~~Sg~-g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~~~D 206 (269)
++||+|+|.|. |..+-..+.. .| .++.+ +.++ ....+.++++++|+.... + . . +.++++|
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~--~g---~~V~~-v~~r---~~~~~~~l~~~~g~~~~~-~----~-~----~~~~~aD 83 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTA--AQ---IPAII-ANSR---GPASLSSVTDRFGASVKA-V----E-L----KDALQAD 83 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHH--TT---CCEEE-ECTT---CGGGGHHHHHHHTTTEEE-C----C-H----HHHTTSS
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CC---CEEEE-EECC---CHHHHHHHHHHhCCCccc-C----h-H----HHHhcCC
Confidence 57999999887 4444332321 34 45554 3555 234567778888887654 1 1 1 2245899
Q ss_pred EEEEEecceeee
Q 024345 207 FLVLARYMQVNR 218 (269)
Q Consensus 207 livla~y~~il~ 218 (269)
+|+++--.+.+.
T Consensus 84 vVilavp~~~~~ 95 (220)
T 4huj_A 84 VVILAVPYDSIA 95 (220)
T ss_dssp EEEEESCGGGHH
T ss_pred EEEEeCChHHHH
Confidence 999986555444
No 93
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=78.28 E-value=2.9 Score=38.93 Aligned_cols=72 Identities=6% Similarity=0.037 Sum_probs=41.4
Q ss_pred CCeeEEEEEeCCc-----hHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCC--eEEeCCCCCchHHHHH
Q 024345 127 PKYKVAVLASKQE-----HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP--YHYLCAKENEREEELL 199 (269)
Q Consensus 127 ~~~riav~~Sg~g-----~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP--~~~~~~~~~~~e~~l~ 199 (269)
+++||+|+|.|.+ .-+.++.. .+ .+++++.+++++ ...+.++|+++|+| -.+- +.+ +++
T Consensus 36 ~~~rvgiiG~G~~~~ig~~h~~~~~~---~~--~~~lva~v~d~~---~~~a~~~a~~~g~~~~~~~~-----~~~-~ll 101 (417)
T 3v5n_A 36 KRIRLGMVGGGSGAFIGAVHRIAARL---DD--HYELVAGALSST---PEKAEASGRELGLDPSRVYS-----DFK-EMA 101 (417)
T ss_dssp CCEEEEEESCC--CHHHHHHHHHHHH---TS--CEEEEEEECCSS---HHHHHHHHHHHTCCGGGBCS-----CHH-HHH
T ss_pred CcceEEEEcCCCchHHHHHHHHHHhh---CC--CcEEEEEEeCCC---HHHHHHHHHHcCCCcccccC-----CHH-HHH
Confidence 5689999999972 12222221 23 267877566662 35678889999997 3321 222 344
Q ss_pred HHh----ccCCEEEEEe
Q 024345 200 ELV----QNTDFLVLAR 212 (269)
Q Consensus 200 ~~l----~~~Dlivla~ 212 (269)
+.- .++|+|+++.
T Consensus 102 ~~~~~~~~~vD~V~I~t 118 (417)
T 3v5n_A 102 IREAKLKNGIEAVAIVT 118 (417)
T ss_dssp HHHHHCTTCCSEEEECS
T ss_pred hcccccCCCCcEEEECC
Confidence 321 1478887764
No 94
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=77.84 E-value=3.1 Score=37.52 Aligned_cols=69 Identities=9% Similarity=0.133 Sum_probs=40.1
Q ss_pred CCeeEEEEEeCCchHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhc--c
Q 024345 127 PKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ--N 204 (269)
Q Consensus 127 ~~~riav~~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~--~ 204 (269)
+++||+|+|.|.-. ...+..+++-. .+++++|.... ...+.++++++|+|.+ . + +.++++ +
T Consensus 4 ~~~~vgiiG~G~~g--~~~~~~l~~~~-~~~lvav~d~~----~~~~~~~~~~~g~~~~--~----~----~~~~l~~~~ 66 (354)
T 3db2_A 4 NPVGVAAIGLGRWA--YVMADAYTKSE-KLKLVTCYSRT----EDKREKFGKRYNCAGD--A----T----MEALLARED 66 (354)
T ss_dssp CCEEEEEECCSHHH--HHHHHHHTTCS-SEEEEEEECSS----HHHHHHHHHHHTCCCC--S----S----HHHHHHCSS
T ss_pred CcceEEEEccCHHH--HHHHHHHHhCC-CcEEEEEECCC----HHHHHHHHHHcCCCCc--C----C----HHHHhcCCC
Confidence 46899999998731 12233332211 36777665432 3457788889998862 1 1 223443 6
Q ss_pred CCEEEEEe
Q 024345 205 TDFLVLAR 212 (269)
Q Consensus 205 ~Dlivla~ 212 (269)
+|+++++-
T Consensus 67 ~D~V~i~t 74 (354)
T 3db2_A 67 VEMVIITV 74 (354)
T ss_dssp CCEEEECS
T ss_pred CCEEEEeC
Confidence 78777754
No 95
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=77.83 E-value=14 Score=35.18 Aligned_cols=81 Identities=14% Similarity=-0.016 Sum_probs=52.0
Q ss_pred EEEEEEc---CCCcChHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHH-HHHHHHHhhhhhhcccee
Q 024345 43 GIHVFHC---PDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPRE-QMDEDFFKLSKMFNAMRS 118 (269)
Q Consensus 43 ~iItV~G---~DrpGIVa~VS~~La~~giNI~dl~~~~~~~~g~F~m~~~v~~p~~~~~~~-~L~e~L~~la~el~l~~~ 118 (269)
..|++.| +|+||+.++|-+.|+++|+||.-+++.. -.+.+.++-. +.+ .+++.++++.++++....
T Consensus 299 ~~i~i~~~~~~~~~g~~~~if~~l~~~~i~vd~i~~~~------~~is~~V~~~----d~~~~~~~~~~el~~~~~~~~v 368 (446)
T 3tvi_A 299 TVIAIEKALLNSEVGFCRKILSILEMYGVSFEHMPSGV------DSVSLVIEDC----KLDGKCDKIIEEIKKQCNPDSI 368 (446)
T ss_dssp EEEEEECTTGGGSTTHHHHHHHHHHTTTCCEEEBCEET------TEEEEEEEHH----HHTTTHHHHHHHHHHHSCCSEE
T ss_pred EEEEEEecCCCccHHHHHHHHHHHHHcCCcEEEEecCC------CEEEEEEecc----hHHHHHHHHHHHHHHhcCCCcE
Confidence 3578887 5899999999999999999999887631 1333444321 122 355566666666653222
Q ss_pred eeeecCCCCCeeEEEEEeC
Q 024345 119 VVRVPDIDPKYKVAVLASK 137 (269)
Q Consensus 119 ~~~~~~~~~~~riav~~Sg 137 (269)
.+ ...--+|++.|.|
T Consensus 369 ~v----~~~vA~VSvVG~g 383 (446)
T 3tvi_A 369 EI----HPNMALVATVGTG 383 (446)
T ss_dssp EE----EEEEEEEEEECGG
T ss_pred EE----eCCeEEEEEECCC
Confidence 22 2244588888776
No 96
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=77.67 E-value=6.4 Score=35.46 Aligned_cols=49 Identities=12% Similarity=0.169 Sum_probs=30.1
Q ss_pred CCCeeEEEEEeCCc-h-HHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCC
Q 024345 126 DPKYKVAVLASKQE-H-CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP 183 (269)
Q Consensus 126 ~~~~riav~~Sg~g-~-~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP 183 (269)
..++||+|+|.|.- . .+..|.. .+ ..++++|+... ...+.++++++|+|
T Consensus 4 ~~~~~vgiiG~G~ig~~~~~~l~~---~~--~~~lv~v~d~~----~~~~~~~a~~~~~~ 54 (362)
T 1ydw_A 4 ETQIRIGVMGCADIARKVSRAIHL---AP--NATISGVASRS----LEKAKAFATANNYP 54 (362)
T ss_dssp --CEEEEEESCCTTHHHHHHHHHH---CT--TEEEEEEECSS----HHHHHHHHHHTTCC
T ss_pred CCceEEEEECchHHHHHHHHHHhh---CC--CcEEEEEEcCC----HHHHHHHHHHhCCC
Confidence 35689999999883 3 2333322 22 36777665533 34567889999974
No 97
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=77.54 E-value=4.5 Score=36.19 Aligned_cols=72 Identities=6% Similarity=0.028 Sum_probs=41.4
Q ss_pred CeeEEEEEeCCc-h-HHHHHHHh--hhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhc
Q 024345 128 KYKVAVLASKQE-H-CLVDFLYG--WQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 203 (269)
Q Consensus 128 ~~riav~~Sg~g-~-~l~~ll~~--~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~ 203 (269)
|.||+|+|.|.. . -+.++... ...-...+++++|+... ...+.++|+++|+|-.+-+ +-++++
T Consensus 6 klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~----~~~a~~~a~~~g~~~~~~d---------~~~ll~ 72 (390)
T 4h3v_A 6 NLGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRD----AEAVRAAAGKLGWSTTETD---------WRTLLE 72 (390)
T ss_dssp EEEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSS----HHHHHHHHHHHTCSEEESC---------HHHHTT
T ss_pred cCcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCC----HHHHHHHHHHcCCCcccCC---------HHHHhc
Confidence 479999999873 2 22333221 11111134777665533 3457889999999966532 224454
Q ss_pred --cCCEEEEEe
Q 024345 204 --NTDFLVLAR 212 (269)
Q Consensus 204 --~~Dlivla~ 212 (269)
++|+|+++-
T Consensus 73 ~~~iDaV~I~t 83 (390)
T 4h3v_A 73 RDDVQLVDVCT 83 (390)
T ss_dssp CTTCSEEEECS
T ss_pred CCCCCEEEEeC
Confidence 577777653
No 98
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=77.46 E-value=4.7 Score=37.77 Aligned_cols=49 Identities=14% Similarity=0.125 Sum_probs=30.8
Q ss_pred CCeeEEEEEe----CC-ch-HHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCC
Q 024345 127 PKYKVAVLAS----KQ-EH-CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP 183 (269)
Q Consensus 127 ~~~riav~~S----g~-g~-~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP 183 (269)
+++||+|+|. |. |. -+..|.. .. + .+++++|+... ...+.++|+++|+|
T Consensus 19 ~~irvgiIG~g~~gG~~g~~~~~~l~~-~~-~--~~~lvav~d~~----~~~~~~~a~~~g~~ 73 (438)
T 3btv_A 19 APIRVGFVGLNAAKGWAIKTHYPAILQ-LS-S--QFQITALYSPK----IETSIATIQRLKLS 73 (438)
T ss_dssp CCEEEEEESCCTTSSSTTTTHHHHHHH-TT-T--TEEEEEEECSS----HHHHHHHHHHTTCT
T ss_pred CCCEEEEEcccCCCChHHHHHHHHHHh-cC-C--CeEEEEEEeCC----HHHHHHHHHHcCCC
Confidence 4689999999 54 33 3444332 10 2 36787765433 34577889999997
No 99
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=77.41 E-value=4.2 Score=36.40 Aligned_cols=69 Identities=12% Similarity=0.132 Sum_probs=41.1
Q ss_pred CeeEEEEEeCC-chHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhc--c
Q 024345 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ--N 204 (269)
Q Consensus 128 ~~riav~~Sg~-g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~--~ 204 (269)
++||+|+|.|. |.. .+..+.+- -..++++|.... ...+.++++++|++..+-+ +.++++ +
T Consensus 2 ~~rvgiIG~G~~g~~---~~~~l~~~-~~~~l~av~d~~----~~~~~~~~~~~~~~~~~~~---------~~~ll~~~~ 64 (344)
T 3ezy_A 2 SLRIGVIGLGRIGTI---HAENLKMI-DDAILYAISDVR----EDRLREMKEKLGVEKAYKD---------PHELIEDPN 64 (344)
T ss_dssp CEEEEEECCSHHHHH---HHHHGGGS-TTEEEEEEECSC----HHHHHHHHHHHTCSEEESS---------HHHHHHCTT
T ss_pred eeEEEEEcCCHHHHH---HHHHHHhC-CCcEEEEEECCC----HHHHHHHHHHhCCCceeCC---------HHHHhcCCC
Confidence 47999999987 332 22222221 136777665433 3457788999999855422 223444 6
Q ss_pred CCEEEEEec
Q 024345 205 TDFLVLARY 213 (269)
Q Consensus 205 ~Dlivla~y 213 (269)
+|+++++--
T Consensus 65 ~D~V~i~tp 73 (344)
T 3ezy_A 65 VDAVLVCSS 73 (344)
T ss_dssp CCEEEECSC
T ss_pred CCEEEEcCC
Confidence 888887653
No 100
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=77.13 E-value=5.4 Score=35.46 Aligned_cols=66 Identities=9% Similarity=0.111 Sum_probs=39.9
Q ss_pred CeeEEEEEeCC-chHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhc--c
Q 024345 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ--N 204 (269)
Q Consensus 128 ~~riav~~Sg~-g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~--~ 204 (269)
++||+|+|.|. |..+...+.. .+ .+++++|.. + ....+.++++++|++ + . + +.++++ +
T Consensus 3 ~~~vgiiG~G~~g~~~~~~l~~--~~--~~~l~av~d-~---~~~~~~~~~~~~~~~--~-~----~----~~~~l~~~~ 63 (331)
T 4hkt_A 3 TVRFGLLGAGRIGKVHAKAVSG--NA--DARLVAVAD-A---FPAAAEAIAGAYGCE--V-R----T----IDAIEAAAD 63 (331)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH--CT--TEEEEEEEC-S---SHHHHHHHHHHTTCE--E-C----C----HHHHHHCTT
T ss_pred ceEEEEECCCHHHHHHHHHHhh--CC--CcEEEEEEC-C---CHHHHHHHHHHhCCC--c-C----C----HHHHhcCCC
Confidence 58999999987 3332222221 12 367776554 4 234578889999998 3 2 1 123444 6
Q ss_pred CCEEEEEe
Q 024345 205 TDFLVLAR 212 (269)
Q Consensus 205 ~Dlivla~ 212 (269)
+|+++++-
T Consensus 64 ~D~V~i~t 71 (331)
T 4hkt_A 64 IDAVVICT 71 (331)
T ss_dssp CCEEEECS
T ss_pred CCEEEEeC
Confidence 88888764
No 101
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=76.72 E-value=17 Score=33.65 Aligned_cols=101 Identities=12% Similarity=0.138 Sum_probs=55.7
Q ss_pred CCeeEEEEEeCCchHHHHHHHhhhcCCCCceEEEEeeCCCC-CCChhHH----HHHHhCCCCeEEeCCCCCchHHHHHHH
Q 024345 127 PKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDR-GPNSHVI----RFLERHGIPYHYLCAKENEREEELLEL 201 (269)
Q Consensus 127 ~~~riav~~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~-~~~~~v~----~~a~~~gIP~~~~~~~~~~~e~~l~~~ 201 (269)
...||+++|-++ .....++..+.. ++.++. ++.|+. .++..+. ++|++.|..+.... ++.+.
T Consensus 178 ~glkva~vGD~~-nva~Sl~~~~~~--~G~~v~--~~~P~~~~~~~~~~~~~~~~a~~~G~~v~~~~--------d~~ea 244 (340)
T 4ep1_A 178 KGIKLAYVGDGN-NVCHSLLLASAK--VGMHMT--VATPVGYRPNEEIVKKALAIAKETGAEIEILH--------NPELA 244 (340)
T ss_dssp TTCEEEEESCCC-HHHHHHHHHHHH--HTCEEE--EECCTTCCCCHHHHHHHHHHHHHHCCCEEEES--------CHHHH
T ss_pred CCCEEEEECCCc-hhHHHHHHHHHH--cCCEEE--EECCcccCCCHHHHHHHHHHHHHcCCeEEEEC--------CHHHH
Confidence 457899987763 233333333211 124543 343432 2344444 44557888777643 23356
Q ss_pred hccCCEEEEEecce----------------eee---cccccccccccCCCccccCCCCCCCCCcH
Q 024345 202 VQNTDFLVLARYMQ----------------VNR---IRLYVAQLFSCLVTEQLTVLNSSLGGINI 247 (269)
Q Consensus 202 l~~~Dlivla~y~~----------------il~---l~~~~~~~iN~~~~~iHpSLLP~~rG~~p 247 (269)
++++|+|.+-.|-. .+. ++..+..+|= .|| ||.+||...
T Consensus 245 v~~aDVvyt~~w~smg~e~~~~~~~~~~~y~vt~ell~~ak~dai~-----MHc--LPa~Rg~EI 302 (340)
T 4ep1_A 245 VNEADFIYTDVWMSMGQEGEEEKYTLFQPYQINKELVKHAKQTYHF-----LHC--LPAHREEEV 302 (340)
T ss_dssp HTTCSEEEECCC------CHHHHHHHHGGGCBCHHHHTTSCTTCEE-----EEC--SCCCBTTTB
T ss_pred hCCCCEEEecCccCCCCCchHHHHHHhccccCCHHHHHhcCCCcEE-----ECC--CCCCCCcee
Confidence 67899999888732 122 4444445555 788 799999543
No 102
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=76.53 E-value=6.5 Score=34.97 Aligned_cols=70 Identities=14% Similarity=0.176 Sum_probs=39.0
Q ss_pred CCeeEEEEEeCCchHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhc--c
Q 024345 127 PKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ--N 204 (269)
Q Consensus 127 ~~~riav~~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~--~ 204 (269)
+++||+|+|.|..+.. .++..++.. .+++++|+...+ ..+.++|++++.+-.+ . + +.++++ +
T Consensus 3 ~~~rvgiiG~G~~~~~-~~~~~l~~~--~~~lvav~d~~~----~~~~~~a~~~~~~~~~-~----~----~~~ll~~~~ 66 (336)
T 2p2s_A 3 KKIRFAAIGLAHNHIY-DMCQQLIDA--GAELAGVFESDS----DNRAKFTSLFPSVPFA-A----S----AEQLITDAS 66 (336)
T ss_dssp -CCEEEEECCSSTHHH-HHHHHHHHT--TCEEEEEECSCT----TSCHHHHHHSTTCCBC-S----C----HHHHHTCTT
T ss_pred CccEEEEECCChHHHH-HhhhhhcCC--CcEEEEEeCCCH----HHHHHHHHhcCCCccc-C----C----HHHHhhCCC
Confidence 3589999999876431 222322222 378887766442 2356788888533222 1 1 223444 5
Q ss_pred CCEEEEEe
Q 024345 205 TDFLVLAR 212 (269)
Q Consensus 205 ~Dlivla~ 212 (269)
+|+++.+.
T Consensus 67 ~D~V~i~t 74 (336)
T 2p2s_A 67 IDLIACAV 74 (336)
T ss_dssp CCEEEECS
T ss_pred CCEEEEeC
Confidence 77777663
No 103
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=76.35 E-value=8.8 Score=36.54 Aligned_cols=49 Identities=6% Similarity=0.122 Sum_probs=29.8
Q ss_pred CCeeEEEEEeCC--c---h-HHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCC
Q 024345 127 PKYKVAVLASKQ--E---H-CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP 183 (269)
Q Consensus 127 ~~~riav~~Sg~--g---~-~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP 183 (269)
+++||+|+|.|. | . -+..|.. .. + .+++++|+... ...+.++|+++|+|
T Consensus 38 ~~irvgiIG~g~~GG~~g~~h~~~l~~-~~-~--~~~lvav~d~~----~~~a~~~a~~~g~~ 92 (479)
T 2nvw_A 38 RPIRVGFVGLTSGKSWVAKTHFLAIQQ-LS-S--QFQIVALYNPT----LKSSLQTIEQLQLK 92 (479)
T ss_dssp CCEEEEEECCCSTTSHHHHTHHHHHHH-TT-T--TEEEEEEECSC----HHHHHHHHHHTTCT
T ss_pred CcCEEEEEcccCCCCHHHHHHHHHHHh-cC-C--CeEEEEEEeCC----HHHHHHHHHHcCCC
Confidence 458999999942 2 2 2333322 10 2 36787765533 34577889999998
No 104
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=76.19 E-value=11 Score=34.57 Aligned_cols=104 Identities=9% Similarity=0.164 Sum_probs=57.5
Q ss_pred CCeeEEEEEeCCchHHHHHHHhhhcCCCCceEEEEeeCCCCC-CChhHH----HHHHhCCCCeEEeCCCCCchHHHHHHH
Q 024345 127 PKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRG-PNSHVI----RFLERHGIPYHYLCAKENEREEELLEL 201 (269)
Q Consensus 127 ~~~riav~~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~-~~~~v~----~~a~~~gIP~~~~~~~~~~~e~~l~~~ 201 (269)
...||+++|-+.......++..+.. ++.++. ++.|+.. |+..+. +.|++.|..+.... ++.+.
T Consensus 166 ~gl~va~vGD~~~rva~Sl~~~~~~--~G~~v~--~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~--------d~~ea 233 (325)
T 1vlv_A 166 KGVKVVFMGDTRNNVATSLMIACAK--MGMNFV--ACGPEELKPRSDVFKRCQEIVKETDGSVSFTS--------NLEEA 233 (325)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHHH--TTCEEE--EESCGGGCCCHHHHHHHHHHHHHHCCEEEEES--------CHHHH
T ss_pred CCcEEEEECCCCcCcHHHHHHHHHH--CCCEEE--EECCccccCCHHHHHHHHHHHHHcCCeEEEEc--------CHHHH
Confidence 4578999888633333444433221 235543 4444321 333344 44558887766543 23356
Q ss_pred hccCCEEEEEecc-----------------eeee---cccc-cccccccCCCccccCCCCCCCCCcHHH
Q 024345 202 VQNTDFLVLARYM-----------------QVNR---IRLY-VAQLFSCLVTEQLTVLNSSLGGINISL 249 (269)
Q Consensus 202 l~~~Dlivla~y~-----------------~il~---l~~~-~~~~iN~~~~~iHpSLLP~~rG~~p~~ 249 (269)
++++|+|.+-.|- +.+. ++.. +..+|= .|| ||.+||...-.
T Consensus 234 v~~aDvvyt~~w~smg~~~~~~~~~~~~~~y~v~~ell~~a~k~dai~-----mH~--LP~~Rg~EI~~ 295 (325)
T 1vlv_A 234 LAGADVVYTDVWASMGEEDKEKERMALLKPYQVNERVMEMTGKSETIF-----MHC--LPAVKGQEVTY 295 (325)
T ss_dssp HTTCSEEEECCCC----------CHHHHGGGCBCHHHHHTTCCTTCEE-----EEC--SCCCBTTTBCH
T ss_pred HccCCEEEeccccccccccchHhHHHHHhhcCCCHHHHHhccCCCeEE-----ECC--CCCCCCcccCH
Confidence 6789999997772 1111 3333 334555 887 89999965433
No 105
>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*
Probab=75.94 E-value=7.4 Score=36.65 Aligned_cols=55 Identities=13% Similarity=0.150 Sum_probs=38.1
Q ss_pred CeeEEEEEe-CC-chHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeC
Q 024345 128 KYKVAVLAS-KQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (269)
Q Consensus 128 ~~riav~~S-g~-g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~ 188 (269)
++||+++|| |+ |+...+++.... + .++++++.+++ .-....+.|+++++.+..+.
T Consensus 4 m~rI~ILGsTGSIG~~~l~vi~~~p-~--~~~v~al~ag~---ni~~l~~~~~~f~~~~v~v~ 60 (388)
T 1r0k_A 4 PRTVTVLGATGSIGHSTLDLIERNL-D--RYQVIALTANR---NVKDLADAAKRTNAKRAVIA 60 (388)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTG-G--GEEEEEEEESS---CHHHHHHHHHHTTCSEEEES
T ss_pred ceEEEEECCCeEeHHHHHHHHHhCc-C--cEEEEEEEcCC---CHHHHHHHHHHcCCcEEEEc
Confidence 589999999 76 565556665421 1 26777776765 23457888999999887764
No 106
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=75.64 E-value=6.8 Score=37.37 Aligned_cols=63 Identities=13% Similarity=0.073 Sum_probs=46.3
Q ss_pred ceEEEEEEcC---CCcChHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHhhhhhhc
Q 024345 41 THGIHVFHCP---DEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFN 114 (269)
Q Consensus 41 ~~~iItV~G~---DrpGIVa~VS~~La~~giNI~dl~~~~~~~~g~F~m~~~v~~p~~~~~~~~L~e~L~~la~el~ 114 (269)
.-..|+++|. .+||+.+++.+.|++.|+||.-++|.. ..-.+.+.|+ .++..+++..|-++|.
T Consensus 373 ~vA~VSvVG~gM~~~~Gvaarif~aLa~~~InI~mIsqgt----Sei~Is~vV~-------~~d~~~Av~aLH~~ff 438 (446)
T 3tvi_A 373 NMALVATVGTGMAKTKGIANKIFTALSKENVNIRMIDQGS----SEINVIVGVE-------TVDFEKAVKSIYNAFN 438 (446)
T ss_dssp EEEEEEEECGGGSSCTTHHHHHHHHHHHTTCCEEEEEECS----CTTEEEEEEE-------GGGHHHHHHHHHHHHC
T ss_pred CeEEEEEECCCccCChhHHHHHHHHHHHCCCCEEEEEecC----CCceEEEEEc-------HHHHHHHHHHHHHHHh
Confidence 4568999997 489999999999999999999998731 2234444444 2456677777776663
No 107
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=75.25 E-value=6.7 Score=37.49 Aligned_cols=63 Identities=14% Similarity=0.045 Sum_probs=45.0
Q ss_pred eEEEEEEcC---CCcChHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHhhhhhhcc
Q 024345 42 HGIHVFHCP---DEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNA 115 (269)
Q Consensus 42 ~~iItV~G~---DrpGIVa~VS~~La~~giNI~dl~~~~~~~~g~F~m~~~v~~p~~~~~~~~L~e~L~~la~el~l 115 (269)
-.+++|+|. ++||+.+++.+.|++.|+||.-++|.. ..-.+.+.|+ .++..++++.|-+.|.+
T Consensus 404 ~a~vsvVG~gm~~~~Gvaak~f~aL~~~~InI~misqgt----Se~~Is~vV~-------~~d~~~Av~aLh~~f~~ 469 (473)
T 3c1m_A 404 VCVISVVGAGMRGAKGIAGKIFTAVSESGANIKMIAQGS----SEVNISFVID-------EKDLLNCVRKLHEKFIE 469 (473)
T ss_dssp EEEEEEECTTTTTCTTHHHHHHHHHHHHTCCCCEEEESS----CSSEEEEEEE-------GGGHHHHHHHHHHHHTT
T ss_pred cEEEEEEecCCCCChhHHHHHHHHHHHCCCCEEEEecCC----CCceEEEEEc-------HHHHHHHHHHHHHHHhc
Confidence 456899997 599999999999999999997776521 2234444444 24467777777777753
No 108
>1zvp_A Hypothetical protein VC0802; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 2.20A {Vibrio cholerae} SCOP: d.58.18.9 d.58.18.9
Probab=74.60 E-value=3.4 Score=33.22 Aligned_cols=36 Identities=14% Similarity=0.214 Sum_probs=30.3
Q ss_pred eEEEEEEc---CCCcChHHHHHHHHHhCCCeEeEeeeec
Q 024345 42 HGIHVFHC---PDEVGIVAKLSECIASRGGNILAADVFV 77 (269)
Q Consensus 42 ~~iItV~G---~DrpGIVa~VS~~La~~giNI~dl~~~~ 77 (269)
-..|++.| -|-.|++++|++.|+++||.|--++++.
T Consensus 71 wr~i~l~~~~~l~~vGi~a~is~~LA~agIsif~iSty~ 109 (133)
T 1zvp_A 71 FSLITLTVHSSLEAVGLTAAFATKLAEHGISANVIAGYY 109 (133)
T ss_dssp EEEEEEECCC--CCSCHHHHHHHHHHHTTCCCEEEECSS
T ss_pred eEEEEEeccCCccHHHHHHHHHHHHHhCCCCcEEEEecc
Confidence 34667766 4999999999999999999999998863
No 109
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=74.02 E-value=5.9 Score=37.85 Aligned_cols=62 Identities=11% Similarity=0.083 Sum_probs=42.9
Q ss_pred ceEEEEEEc---CCCcChHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHhhhhhh
Q 024345 41 THGIHVFHC---PDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMF 113 (269)
Q Consensus 41 ~~~iItV~G---~DrpGIVa~VS~~La~~giNI~dl~~~~~~~~g~F~m~~~v~~p~~~~~~~~L~e~L~~la~el 113 (269)
.-..|++.| .++||+.+++.+.|+++|+||.-++|. ++.+.+.+.++ . ++..++++.+.+++
T Consensus 317 ~~a~Isv~g~~m~~~~G~~a~if~~La~~~InV~~IsQ~----tse~~Is~~V~--~-----~d~~~a~~~L~~~l 381 (473)
T 3c1m_A 317 NVALINIFGAGMVGVSGTAARIFKALGEEEVNVILISQG----SSETNISLVVS--E-----EDVDKALKALKREF 381 (473)
T ss_dssp EEEEEEEEECSSSCHHHHHHHHHHHHHHTTCCEEEEEEC----CTTCCEEEEEE--G-----GGHHHHHHHHHHHH
T ss_pred CeEEEEEecCCCCCCcCHHHHHHHHHHHcCCcEEEEEec----CCCCEEEEEEe--c-----hHHHHHHHHHHHHH
Confidence 455788998 578899999999999999999999872 22344445444 2 12345555555555
No 110
>1ni5_A Putative cell cycle protein MESJ; structural genomics, ATPase, PP-type, putative cell cycle PR PSI, protein structure initiative; 2.65A {Escherichia coli} SCOP: b.153.1.2 c.26.2.5 d.229.1.1
Probab=73.83 E-value=11 Score=35.41 Aligned_cols=61 Identities=16% Similarity=0.218 Sum_probs=42.4
Q ss_pred CeeEEEEEeCCc--hHHHHHHHhhhcCCCCceEEEEeeCCCCCCC-----hhHHHHHHhCCCCeEEeC
Q 024345 128 KYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGPN-----SHVIRFLERHGIPYHYLC 188 (269)
Q Consensus 128 ~~riav~~Sg~g--~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~-----~~v~~~a~~~gIP~~~~~ 188 (269)
..||+|..||.. ..|..++..........++.++-.|+.-.+. ..+.++|+++|||+++.+
T Consensus 13 ~~~vlVa~SGG~DS~~Ll~ll~~~~~~~~g~~v~avhvdhglr~~s~~~~~~v~~~~~~lgi~~~v~~ 80 (433)
T 1ni5_A 13 SRQILVAFSGGLDSTVLLHQLVQWRTENPGVALRAIHVHHGLSANADAWVTHCENVCQQWQVPLVVER 80 (433)
T ss_dssp CSEEEEECCSBHHHHHHHHHHHHHHTTSTTCEEEEEEECCSCCSSHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCEEEEEEcchHHHHHHHHHHHHHHHhcCCCeEEEEEEECCCCcccHHHHHHHHHHHHHcCCcEEEEE
Confidence 358999999974 5565666544322134688888888742122 257899999999999877
No 111
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=73.40 E-value=7.9 Score=34.23 Aligned_cols=68 Identities=15% Similarity=0.151 Sum_probs=39.4
Q ss_pred CeeEEEEEeCC-chH-HHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhc-c
Q 024345 128 KYKVAVLASKQ-EHC-LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ-N 204 (269)
Q Consensus 128 ~~riav~~Sg~-g~~-l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~-~ 204 (269)
|+||+|+|.|. |.. +..+.. .+ ..++++|.... .....++++++|++..+-+ .+ + ++. +
T Consensus 1 ~~~vgiiG~G~~g~~~~~~l~~---~~--~~~~~~v~d~~----~~~~~~~~~~~~~~~~~~~-----~~-~---~l~~~ 62 (325)
T 2ho3_A 1 MLKLGVIGTGAISHHFIEAAHT---SG--EYQLVAIYSRK----LETAATFASRYQNIQLFDQ-----LE-V---FFKSS 62 (325)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH---TT--SEEEEEEECSS----HHHHHHHGGGSSSCEEESC-----HH-H---HHTSS
T ss_pred CeEEEEEeCCHHHHHHHHHHHh---CC--CeEEEEEEeCC----HHHHHHHHHHcCCCeEeCC-----HH-H---HhCCC
Confidence 57999999987 322 233322 22 36777665433 3346678888887644421 12 2 233 7
Q ss_pred CCEEEEEec
Q 024345 205 TDFLVLARY 213 (269)
Q Consensus 205 ~Dlivla~y 213 (269)
+|+++++--
T Consensus 63 ~D~V~i~tp 71 (325)
T 2ho3_A 63 FDLVYIASP 71 (325)
T ss_dssp CSEEEECSC
T ss_pred CCEEEEeCC
Confidence 888877653
No 112
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=72.65 E-value=12 Score=33.86 Aligned_cols=72 Identities=13% Similarity=0.067 Sum_probs=41.5
Q ss_pred CCCeeEEEEE-eCCc-h--HH----HHHHHhhhcCC------CCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCC
Q 024345 126 DPKYKVAVLA-SKQE-H--CL----VDFLYGWQEGK------LPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKE 191 (269)
Q Consensus 126 ~~~~riav~~-Sg~g-~--~l----~~ll~~~~~g~------l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~ 191 (269)
.+++||+++| .|.. . .+ .++.+ .+. ....+...++++ ......++|+++|+|..+-+
T Consensus 4 ~~~irigiiG~~G~~g~~~h~~~~~~~~~~---~~~~~l~~~~~~~~~~av~~~---~~~~a~~~a~~~~~~~~~~~--- 74 (383)
T 3oqb_A 4 TQRLGLIMNGVTGRMGLNQHLIRSIVAIRD---QGGVRLKNGDRIMPDPILVGR---SAEKVEALAKRFNIARWTTD--- 74 (383)
T ss_dssp CEEEEEEEESTTSTHHHHTTTTTTHHHHHH---HTSEECTTSCEEEEEEEEECS---SSHHHHHHHHHTTCCCEESC---
T ss_pred CceeEEEEEeccchhhhhhhHHHHHHHHhh---cCceeecCCcccceeeEEEcC---CHHHHHHHHHHhCCCcccCC---
Confidence 3568999999 8883 3 23 44433 221 111111246665 24567889999999854422
Q ss_pred CchHHHHHHHhc--cCCEEEEEe
Q 024345 192 NEREEELLELVQ--NTDFLVLAR 212 (269)
Q Consensus 192 ~~~e~~l~~~l~--~~Dlivla~ 212 (269)
+-++++ ++|+++++.
T Consensus 75 ------~~~ll~~~~iD~V~i~t 91 (383)
T 3oqb_A 75 ------LDAALADKNDTMFFDAA 91 (383)
T ss_dssp ------HHHHHHCSSCCEEEECS
T ss_pred ------HHHHhcCCCCCEEEECC
Confidence 223444 578877764
No 113
>1wy5_A TILS, hypothetical UPF0072 protein AQ_1887; N-type ATP-ppase, structural genomics, translation, NPPSFA; 2.42A {Aquifex aeolicus} SCOP: c.26.2.5 d.229.1.1 PDB: 2e21_A* 2e89_A*
Probab=72.63 E-value=11 Score=33.83 Aligned_cols=79 Identities=11% Similarity=0.080 Sum_probs=49.7
Q ss_pred HHHHHHHHhhhhhhccceeeeeecCCCCCeeEEEEEeCCc--hHHHHHHHhhhcCCCCce-EEEEeeCCCCCCC-----h
Q 024345 100 EQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQE--HCLVDFLYGWQEGKLPVE-ITCVISNHDRGPN-----S 171 (269)
Q Consensus 100 ~~L~e~L~~la~el~l~~~~~~~~~~~~~~riav~~Sg~g--~~l~~ll~~~~~g~l~~~-i~~Visn~~~~~~-----~ 171 (269)
..+.+.+.+...+.++. .+..||++..||.. ..|-.++..... .++.+ +.++..|+.-.+. .
T Consensus 5 ~~~~~~~~~~i~~~~l~---------~~~~~vlva~SGG~DS~~Ll~ll~~~~~-~~g~~~v~av~vd~g~r~~s~~~~~ 74 (317)
T 1wy5_A 5 SRVIRKVLALQNDEKIF---------SGERRVLIAFSGGVDSVVLTDVLLKLKN-YFSLKEVALAHFNHMLRESAERDEE 74 (317)
T ss_dssp HHHHHHHHHHHHHHCSC---------SSCCEEEEECCSSHHHHHHHHHHHHSTT-TTTCSEEEEEEEECCSSTHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCC---------CCCCEEEEEecchHHHHHHHHHHHHHHH-HcCCCEEEEEEEECCCCcccHHHHH
Confidence 34555566655555431 23468999999974 455555554322 23467 8777777632111 3
Q ss_pred hHHHHHHhCCCCeEEeC
Q 024345 172 HVIRFLERHGIPYHYLC 188 (269)
Q Consensus 172 ~v~~~a~~~gIP~~~~~ 188 (269)
.+.++|+++|||+++++
T Consensus 75 ~v~~~a~~lgi~~~v~~ 91 (317)
T 1wy5_A 75 FCKEFAKERNMKIFVGK 91 (317)
T ss_dssp HHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHcCCcEEEEE
Confidence 47889999999999876
No 114
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=72.14 E-value=11 Score=33.42 Aligned_cols=57 Identities=12% Similarity=0.025 Sum_probs=35.1
Q ss_pred CCCCCeeEEEEEeCCc-h--HHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCC
Q 024345 124 DIDPKYKVAVLASKQE-H--CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCA 189 (269)
Q Consensus 124 ~~~~~~riav~~Sg~g-~--~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~ 189 (269)
....+|||++++.+.+ + -+..|.+.+++- .++|..+ +.. ...+..++.|++++.++.
T Consensus 16 ~~~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~--GheV~v~-~~~------~~~~~~~~~g~~~~~~~~ 75 (412)
T 3otg_A 16 IEGRHMRVLFASLGTHGHTYPLLPLATAARAA--GHEVTFA-TGE------GFAGTLRKLGFEPVATGM 75 (412)
T ss_dssp --CCSCEEEEECCSSHHHHGGGHHHHHHHHHT--TCEEEEE-ECG------GGHHHHHHTTCEEEECCC
T ss_pred cccceeEEEEEcCCCcccHHHHHHHHHHHHHC--CCEEEEE-ccH------HHHHHHHhcCCceeecCc
Confidence 3556789999887764 2 223555554432 2677644 433 136778889999998763
No 115
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=71.92 E-value=27 Score=31.96 Aligned_cols=101 Identities=15% Similarity=0.213 Sum_probs=56.2
Q ss_pred CCeeEEEEEeCCchHHHHHHHhhhcCCCCceEEEEeeCCCC-CCChhHHH----HHHhCCCCeEEeCCCCCchHHHHHHH
Q 024345 127 PKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDR-GPNSHVIR----FLERHGIPYHYLCAKENEREEELLEL 201 (269)
Q Consensus 127 ~~~riav~~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~-~~~~~v~~----~a~~~gIP~~~~~~~~~~~e~~l~~~ 201 (269)
...||+++|-+ +.....++..+.. ++.++. ++.|+. .|+..+.+ .|++.|..+.... ++.+.
T Consensus 156 ~glkva~vGD~-~rva~Sl~~~~~~--~G~~v~--~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~--------d~~ea 222 (323)
T 3gd5_A 156 AGLKLAYVGDG-NNVAHSLLLGCAK--VGMSIA--VATPEGFTPDPAVSARASEIAGRTGAEVQILR--------DPFEA 222 (323)
T ss_dssp TTCEEEEESCC-CHHHHHHHHHHHH--HTCEEE--EECCTTCCCCHHHHHHHHHHHHHHTCCEEEES--------CHHHH
T ss_pred CCCEEEEECCC-CcHHHHHHHHHHH--cCCEEE--EECCCcccCCHHHHHHHHHHHHHcCCeEEEEC--------CHHHH
Confidence 45799999877 4333334433221 234543 444433 24444444 4556788777653 23356
Q ss_pred hccCCEEEEEeccee-----------------ee---cccccccccccCCCccccCCCCCCCCCcH
Q 024345 202 VQNTDFLVLARYMQV-----------------NR---IRLYVAQLFSCLVTEQLTVLNSSLGGINI 247 (269)
Q Consensus 202 l~~~Dlivla~y~~i-----------------l~---l~~~~~~~iN~~~~~iHpSLLP~~rG~~p 247 (269)
++++|+|.+-.|-.. +. ++..+..+|= .|| ||.+||...
T Consensus 223 v~~aDvvyt~~wqs~g~~~~~~~~~~~~~~y~vt~ell~~ak~dai~-----mHc--lPa~Rg~EI 281 (323)
T 3gd5_A 223 ARGAHILYTDVWTSMGQEAETQHRLQLFEQYQINAALLNCAAAEAIV-----LHC--LPAHRGEEI 281 (323)
T ss_dssp HTTCSEEEECCCC---------CCHHHHTTCCBCHHHHHTSCTTCEE-----EEC--SCCCBTTTB
T ss_pred hcCCCEEEEeceecCCCcccchHHHHHhhccCCCHHHHhhcCCCcEE-----ECC--CCCCCCcee
Confidence 678999998877221 11 3333334555 788 799999543
No 116
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=71.84 E-value=9.7 Score=29.04 Aligned_cols=70 Identities=19% Similarity=0.262 Sum_probs=38.6
Q ss_pred CCeeEEEEEeCC-chHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhc--
Q 024345 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ-- 203 (269)
Q Consensus 127 ~~~riav~~Sg~-g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~-- 203 (269)
.+++|+|+|.|. |..+-..|.. .| +++.++=.++ ...+.+++.|+++...+.. +.+.++...
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~--~g---~~V~~id~~~------~~~~~~~~~~~~~~~gd~~----~~~~l~~~~~~ 69 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTA--AG---KKVLAVDKSK------EKIELLEDEGFDAVIADPT----DESFYRSLDLE 69 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHH--TT---CCEEEEESCH------HHHHHHHHTTCEEEECCTT----CHHHHHHSCCT
T ss_pred CCCEEEEECCCHHHHHHHHHHHH--CC---CeEEEEECCH------HHHHHHHHCCCcEEECCCC----CHHHHHhCCcc
Confidence 346899999876 4444333332 34 4565433222 2355566778887775532 223344333
Q ss_pred cCCEEEEE
Q 024345 204 NTDFLVLA 211 (269)
Q Consensus 204 ~~Dlivla 211 (269)
++|+++++
T Consensus 70 ~~d~vi~~ 77 (141)
T 3llv_A 70 GVSAVLIT 77 (141)
T ss_dssp TCSEEEEC
T ss_pred cCCEEEEe
Confidence 78988775
No 117
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=71.47 E-value=6.8 Score=34.38 Aligned_cols=50 Identities=16% Similarity=0.292 Sum_probs=28.7
Q ss_pred CeeEEEEEeCC-chHH-HHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeE
Q 024345 128 KYKVAVLASKQ-EHCL-VDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYH 185 (269)
Q Consensus 128 ~~riav~~Sg~-g~~l-~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~ 185 (269)
++||+|+|.|. |..+ ..|.+ .|.-+.+| +++++ ......++++++|+.+.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~---~g~~~~~V--~v~dr---~~~~~~~l~~~~gi~~~ 54 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIA---NGYDPNRI--CVTNR---SLDKLDFFKEKCGVHTT 54 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHH---TTCCGGGE--EEECS---SSHHHHHHHHTTCCEEE
T ss_pred CCEEEEEcccHHHHHHHHHHHH---CCCCCCeE--EEEeC---CHHHHHHHHHHcCCEEe
Confidence 47999999987 4433 33333 34212244 35565 23456667777787543
No 118
>2h9z_A Hypothetical protein HP0495; feredoxin-like (beta-alpha-beta-BETA-alpha-beta), structural genomics, unknown function; NMR {Helicobacter pylori} SCOP: d.58.54.2 PDB: 2joq_A
Probab=71.42 E-value=7.9 Score=28.57 Aligned_cols=69 Identities=14% Similarity=0.005 Sum_probs=48.2
Q ss_pred CCCCcceEEEEEEcCCCcC-hHHHHHHHHHhCCCeEeEeeeeccCCCCeEE-EEEEEEeCCCCCCHHHHHHHHHhhhhh
Q 024345 36 VSPTLTHGIHVFHCPDEVG-IVAKLSECIASRGGNILAADVFVPEKKNVFY-SRSEFIFDPIKWPREQMDEDFFKLSKM 112 (269)
Q Consensus 36 ~~~~~~~~iItV~G~DrpG-IVa~VS~~La~~giNI~dl~~~~~~~~g~F~-m~~~v~~p~~~~~~~~L~e~L~~la~e 112 (269)
.-..+-.+.+.|+|+..++ ..++|..++ +.+..+.. .-.+.+|.|. ..+.+.+. +.+++.+-.++|++-
T Consensus 9 ~iefPc~~~~Kvig~~~~~~~~~~V~~v~-~~~~~~~~---~r~Ss~GkY~Svtv~i~a~----s~eq~~~iY~~L~~~ 79 (86)
T 2h9z_A 9 TIIYPCLWDYRVIMTTKDTSTLKELLETY-QRPFKLEF---KNTSKNAKFYSFNVSMEVS----NESERNEIFQKISQL 79 (86)
T ss_dssp CCCCCSEEEEEEEECCSCTHHHHHHSTTC-CSSEECCB---SCSSCCSSCEEEEEEEECC----SHHHHHHHHHHHTCS
T ss_pred cccCCCCceEEEEEECCcHHHHHHHHHHH-hccCCCcc---cccCCCCeEEEEEEEEEEC----CHHHHHHHHHHHhcC
Confidence 4455668999999999999 999999999 55554321 1124568775 56666654 578888877777643
No 119
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=69.96 E-value=15 Score=32.85 Aligned_cols=56 Identities=4% Similarity=-0.083 Sum_probs=34.0
Q ss_pred CCCCCeeEEEEEeCC-ch--HHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeC
Q 024345 124 DIDPKYKVAVLASKQ-EH--CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (269)
Q Consensus 124 ~~~~~~riav~~Sg~-g~--~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~ 188 (269)
....|+||+++..+. || -+..|.+.+++- .++|..+ +.. ...+..++.|++++.++
T Consensus 16 ~~~~m~rIl~~~~~~~GHv~p~l~La~~L~~~--Gh~V~v~-~~~------~~~~~~~~~G~~~~~~~ 74 (415)
T 3rsc_A 16 EGRHMAHLLIVNVASHGLILPTLTVVTELVRR--GHRVSYV-TAG------GFAEPVRAAGATVVPYQ 74 (415)
T ss_dssp ---CCCEEEEECCSCHHHHGGGHHHHHHHHHT--TCEEEEE-ECG------GGHHHHHHTTCEEEECC
T ss_pred CcccCCEEEEEeCCCccccccHHHHHHHHHHC--CCEEEEE-eCH------HHHHHHHhcCCEEEecc
Confidence 455678999998876 32 233455554432 2676644 433 24677788999999876
No 120
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=69.18 E-value=22 Score=25.49 Aligned_cols=72 Identities=18% Similarity=0.303 Sum_probs=39.7
Q ss_pred CCeeEEEEEeCC-chHH-HHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhcc
Q 024345 127 PKYKVAVLASKQ-EHCL-VDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQN 204 (269)
Q Consensus 127 ~~~riav~~Sg~-g~~l-~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~~ 204 (269)
.++||+|+|.|. |..+ +.|.. .| ..+|. +.++. .. -.+.+...|+.+...+.. ..+++.+.+++
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~---~g--~~~v~--~~~r~---~~-~~~~~~~~~~~~~~~d~~---~~~~~~~~~~~ 69 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKT---SS--NYSVT--VADHD---LA-ALAVLNRMGVATKQVDAK---DEAGLAKALGG 69 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHH---CS--SEEEE--EEESC---HH-HHHHHHTTTCEEEECCTT---CHHHHHHHTTT
T ss_pred CcCeEEEECCCHHHHHHHHHHHh---CC--CceEE--EEeCC---HH-HHHHHHhCCCcEEEecCC---CHHHHHHHHcC
Confidence 457899998844 3333 33333 34 24554 33331 11 233344678777766532 23456667778
Q ss_pred CCEEEEEe
Q 024345 205 TDFLVLAR 212 (269)
Q Consensus 205 ~Dlivla~ 212 (269)
+|+++.+.
T Consensus 70 ~d~vi~~~ 77 (118)
T 3ic5_A 70 FDAVISAA 77 (118)
T ss_dssp CSEEEECS
T ss_pred CCEEEECC
Confidence 99988764
No 121
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=68.65 E-value=5.1 Score=34.12 Aligned_cols=69 Identities=19% Similarity=0.343 Sum_probs=38.0
Q ss_pred CCeeEEEEEeCC-chHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhccC
Q 024345 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNT 205 (269)
Q Consensus 127 ~~~riav~~Sg~-g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~~~ 205 (269)
.+|||+|+|.|. |..+-..+. +.| .+| .+.++ ....+.++++++|+.+. . +.+ +.++++
T Consensus 2 ~~m~i~iiG~G~mG~~~a~~l~--~~g---~~v--~~~~~---~~~~~~~~~~~~g~~~~--~----~~~----~~~~~~ 61 (259)
T 2ahr_A 2 NAMKIGIIGVGKMASAIIKGLK--QTP---HEL--IISGS---SLERSKEIAEQLALPYA--M----SHQ----DLIDQV 61 (259)
T ss_dssp -CCEEEEECCSHHHHHHHHHHT--TSS---CEE--EEECS---SHHHHHHHHHHHTCCBC--S----SHH----HHHHTC
T ss_pred CccEEEEECCCHHHHHHHHHHH--hCC---CeE--EEECC---CHHHHHHHHHHcCCEee--C----CHH----HHHhcC
Confidence 357999999887 444432222 133 344 34555 23445666667787642 1 111 234478
Q ss_pred CEEEEEecce
Q 024345 206 DFLVLARYMQ 215 (269)
Q Consensus 206 Dlivla~y~~ 215 (269)
|+|+++---+
T Consensus 62 D~Vi~~v~~~ 71 (259)
T 2ahr_A 62 DLVILGIKPQ 71 (259)
T ss_dssp SEEEECSCGG
T ss_pred CEEEEEeCcH
Confidence 9988876443
No 122
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=68.39 E-value=13 Score=33.70 Aligned_cols=72 Identities=13% Similarity=0.076 Sum_probs=37.8
Q ss_pred CCCCeeEEEEEeCC-chHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhc
Q 024345 125 IDPKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 203 (269)
Q Consensus 125 ~~~~~riav~~Sg~-g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~ 203 (269)
..++|||+|+|+|. |......|. +. .+|..+-.+. .-.+.+.+ .++...++.. +.+++.++++
T Consensus 13 ~g~~mkilvlGaG~vG~~~~~~L~---~~---~~v~~~~~~~------~~~~~~~~-~~~~~~~d~~---d~~~l~~~~~ 76 (365)
T 3abi_A 13 EGRHMKVLILGAGNIGRAIAWDLK---DE---FDVYIGDVNN------ENLEKVKE-FATPLKVDAS---NFDKLVEVMK 76 (365)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHT---TT---SEEEEEESCH------HHHHHHTT-TSEEEECCTT---CHHHHHHHHT
T ss_pred cCCccEEEEECCCHHHHHHHHHHh---cC---CCeEEEEcCH------HHHHHHhc-cCCcEEEecC---CHHHHHHHHh
Confidence 56789999999965 333333332 22 3554322221 12333332 3455555532 2456778888
Q ss_pred cCCEEEEEe
Q 024345 204 NTDFLVLAR 212 (269)
Q Consensus 204 ~~Dlivla~ 212 (269)
++|++|.+-
T Consensus 77 ~~DvVi~~~ 85 (365)
T 3abi_A 77 EFELVIGAL 85 (365)
T ss_dssp TCSEEEECC
T ss_pred CCCEEEEec
Confidence 999988763
No 123
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=68.05 E-value=18 Score=27.49 Aligned_cols=60 Identities=17% Similarity=0.238 Sum_probs=33.6
Q ss_pred CCCeeEEEEEeCCchHHHHHHHhhhcCCCCceEEEEeeCCCCCC-----------ChhHHHHHHhCCCCeEEeC
Q 024345 126 DPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGP-----------NSHVIRFLERHGIPYHYLC 188 (269)
Q Consensus 126 ~~~~riav~~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~-----------~~~v~~~a~~~gIP~~~~~ 188 (269)
+.++|++++|+|.- -+.+++.+++.. ..++++++.+.+... ...+.++++++++...++.
T Consensus 2 ~~~~~vlIiGaG~~--g~~l~~~l~~~~-g~~vvg~~d~~~~~~g~~i~g~pV~g~~~l~~~~~~~~id~viia 72 (141)
T 3nkl_A 2 NAKKKVLIYGAGSA--GLQLANMLRQGK-EFHPIAFIDDDRKKHKTTMQGITIYRPKYLERLIKKHCISTVLLA 72 (141)
T ss_dssp -CCEEEEEECCSHH--HHHHHHHHHHSS-SEEEEEEECSCGGGTTCEETTEEEECGGGHHHHHHHHTCCEEEEC
T ss_pred CCCCEEEEECCCHH--HHHHHHHHHhCC-CcEEEEEEECCcccCCCEecCeEEECHHHHHHHHHHCCCCEEEEe
Confidence 45689999999862 123333333322 478999988763210 1134555666666655554
No 124
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=67.95 E-value=9.6 Score=35.61 Aligned_cols=52 Identities=13% Similarity=0.216 Sum_probs=31.1
Q ss_pred CCCeeEEEEEeCCchHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCC
Q 024345 126 DPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP 183 (269)
Q Consensus 126 ~~~~riav~~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP 183 (269)
.+++||+|+|.|.-.. ..++..+.... .+++++|+... .....++++++|+|
T Consensus 81 ~~~irigiIG~G~~g~-~~~~~~l~~~~-~~~lvav~d~~----~~~~~~~a~~~g~~ 132 (433)
T 1h6d_A 81 DRRFGYAIVGLGKYAL-NQILPGFAGCQ-HSRIEALVSGN----AEKAKIVAAEYGVD 132 (433)
T ss_dssp CCCEEEEEECCSHHHH-HTHHHHTTTCS-SEEEEEEECSC----HHHHHHHHHHTTCC
T ss_pred CCceEEEEECCcHHHH-HHHHHHHhhCC-CcEEEEEEcCC----HHHHHHHHHHhCCC
Confidence 4568999999986321 02233332211 36777665533 34567889999998
No 125
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=67.48 E-value=5.9 Score=32.90 Aligned_cols=71 Identities=13% Similarity=0.142 Sum_probs=38.8
Q ss_pred eeEEEEEeCC-chHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHH-hccCC
Q 024345 129 YKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLEL-VQNTD 206 (269)
Q Consensus 129 ~riav~~Sg~-g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~-l~~~D 206 (269)
|||+|+|.|. |..+-..|.. .| +++..+=.|+ ..+.+++++.|++++.-+.. .++.+.+. ++++|
T Consensus 1 M~iiIiG~G~~G~~la~~L~~--~g---~~v~vid~~~-----~~~~~l~~~~~~~~i~gd~~---~~~~l~~a~i~~ad 67 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLS--RK---YGVVIINKDR-----ELCEEFAKKLKATIIHGDGS---HKEILRDAEVSKND 67 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHH--TT---CCEEEEESCH-----HHHHHHHHHSSSEEEESCTT---SHHHHHHHTCCTTC
T ss_pred CEEEEECCCHHHHHHHHHHHh--CC---CeEEEEECCH-----HHHHHHHHHcCCeEEEcCCC---CHHHHHhcCcccCC
Confidence 5889998766 3444333322 34 4555433222 23556677789888775532 12223332 33788
Q ss_pred EEEEEe
Q 024345 207 FLVLAR 212 (269)
Q Consensus 207 livla~ 212 (269)
+++++-
T Consensus 68 ~vi~~~ 73 (218)
T 3l4b_C 68 VVVILT 73 (218)
T ss_dssp EEEECC
T ss_pred EEEEec
Confidence 877753
No 126
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=67.37 E-value=9 Score=34.65 Aligned_cols=67 Identities=12% Similarity=0.154 Sum_probs=37.7
Q ss_pred CCeeEEEEEeCC-chHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhc--
Q 024345 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ-- 203 (269)
Q Consensus 127 ~~~riav~~Sg~-g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~-- 203 (269)
+++||+|+|.|. |......+.. .+ .+++++|+... ..-.+.|+++|++++. +. .++++
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~l~~--~~--~~~l~av~d~~-----~~~~~~a~~~g~~~~~------~~----~~ll~~~ 64 (359)
T 3e18_A 4 KKYQLVIVGYGGMGSYHVTLASA--AD--NLEVHGVFDIL-----AEKREAAAQKGLKIYE------SY----EAVLADE 64 (359)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHT--ST--TEEEEEEECSS-----HHHHHHHHTTTCCBCS------CH----HHHHHCT
T ss_pred CcCcEEEECcCHHHHHHHHHHHh--CC--CcEEEEEEcCC-----HHHHHHHHhcCCceeC------CH----HHHhcCC
Confidence 468999999987 3322222221 12 36787766533 1224567888987542 11 23333
Q ss_pred cCCEEEEEe
Q 024345 204 NTDFLVLAR 212 (269)
Q Consensus 204 ~~Dlivla~ 212 (269)
++|+++++.
T Consensus 65 ~~D~V~i~t 73 (359)
T 3e18_A 65 KVDAVLIAT 73 (359)
T ss_dssp TCCEEEECS
T ss_pred CCCEEEEcC
Confidence 677777654
No 127
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=66.82 E-value=22 Score=31.68 Aligned_cols=54 Identities=9% Similarity=0.170 Sum_probs=33.6
Q ss_pred CCCCeeEEEEEeCC-c--hHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeC
Q 024345 125 IDPKYKVAVLASKQ-E--HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (269)
Q Consensus 125 ~~~~~riav~~Sg~-g--~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~ 188 (269)
..++|||+|+..+. | ..+..|.+.+++- .++|..+.+ . ..+..+..|++++.++
T Consensus 17 ~~~~MrIl~~~~~~~Ghv~~~~~La~~L~~~--GheV~v~~~-~-------~~~~~~~~G~~~~~~~ 73 (398)
T 3oti_A 17 EGRHMRVLFVSSPGIGHLFPLIQLAWGFRTA--GHDVLIAVA-E-------HADRAAAAGLEVVDVA 73 (398)
T ss_dssp --CCCEEEEECCSSHHHHGGGHHHHHHHHHT--TCEEEEEES-S-------CHHHHHTTTCEEEESS
T ss_pred hhhcCEEEEEcCCCcchHhHHHHHHHHHHHC--CCEEEEecc-c-------hHHHHHhCCCeeEecC
Confidence 44568999997654 3 2334555555443 267765444 2 3567788999999876
No 128
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=66.58 E-value=13 Score=27.61 Aligned_cols=71 Identities=8% Similarity=0.050 Sum_probs=36.8
Q ss_pred CeeEEEEEeCC-chHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHH-hccC
Q 024345 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLEL-VQNT 205 (269)
Q Consensus 128 ~~riav~~Sg~-g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~-l~~~ 205 (269)
.|||+|+|.|. |..+-..|.. .| +++.++ ... ...+.++.+++|+++...+.. ..+.+.+. ++++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~--~g---~~v~~~-d~~----~~~~~~~~~~~~~~~~~~d~~---~~~~l~~~~~~~~ 70 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSE--KG---HDIVLI-DID----KDICKKASAEIDALVINGDCT---KIKTLEDAGIEDA 70 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHH--TT---CEEEEE-ESC----HHHHHHHHHHCSSEEEESCTT---SHHHHHHTTTTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CC---CeEEEE-ECC----HHHHHHHHHhcCcEEEEcCCC---CHHHHHHcCcccC
Confidence 47999998866 3433332321 34 455533 322 223445555678876654421 12223222 3489
Q ss_pred CEEEEE
Q 024345 206 DFLVLA 211 (269)
Q Consensus 206 Dlivla 211 (269)
|+++++
T Consensus 71 d~vi~~ 76 (140)
T 1lss_A 71 DMYIAV 76 (140)
T ss_dssp SEEEEC
T ss_pred CEEEEe
Confidence 998887
No 129
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=65.87 E-value=19 Score=32.39 Aligned_cols=79 Identities=11% Similarity=0.119 Sum_probs=45.1
Q ss_pred CeeEEEEEeCC-chHH--HHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCC-C---c-----h-
Q 024345 128 KYKVAVLASKQ-EHCL--VDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKE-N---E-----R- 194 (269)
Q Consensus 128 ~~riav~~Sg~-g~~l--~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~-~---~-----~- 194 (269)
++||.+.+.|+ ||.. .+|.+.+++. .++|..+-+.+ . --.++..+.|+|++.++... . . .
T Consensus 2 ~~~i~i~~GGTgGHi~palala~~L~~~--g~~V~~vg~~~-g----~e~~~v~~~g~~~~~i~~~~~~~~~~~~~~~~~ 74 (365)
T 3s2u_A 2 KGNVLIMAGGTGGHVFPALACAREFQAR--GYAVHWLGTPR-G----IENDLVPKAGLPLHLIQVSGLRGKGLKSLVKAP 74 (365)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHHHHHT--TCEEEEEECSS-S----THHHHTGGGTCCEEECC--------------CH
T ss_pred CCcEEEEcCCCHHHHHHHHHHHHHHHhC--CCEEEEEECCc-h----HhhchhhhcCCcEEEEECCCcCCCCHHHHHHHH
Confidence 46899998888 4643 3455555443 36877654433 1 12355678899999887321 0 0 0
Q ss_pred ------HHHHHHHhc--cCCEEEEEec
Q 024345 195 ------EEELLELVQ--NTDFLVLARY 213 (269)
Q Consensus 195 ------e~~l~~~l~--~~Dlivla~y 213 (269)
-.+..++++ +||+|+..+.
T Consensus 75 ~~~~~~~~~~~~~l~~~~PDvVi~~g~ 101 (365)
T 3s2u_A 75 LELLKSLFQALRVIRQLRPVCVLGLGG 101 (365)
T ss_dssp HHHHHHHHHHHHHHHHHCCSEEEECSS
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 012334455 8999997654
No 130
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=65.56 E-value=17 Score=28.94 Aligned_cols=71 Identities=13% Similarity=0.015 Sum_probs=39.5
Q ss_pred CCeeEEEEEeCC-chHHHHHHHhhhc-CCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHH--h
Q 024345 127 PKYKVAVLASKQ-EHCLVDFLYGWQE-GKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLEL--V 202 (269)
Q Consensus 127 ~~~riav~~Sg~-g~~l~~ll~~~~~-g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~--l 202 (269)
..++|+|+|.|. |..+-..|.. . | +++.++-.++ .-.+.+++.|+.+...+.. .++.+.+. +
T Consensus 38 ~~~~v~IiG~G~~G~~~a~~L~~--~~g---~~V~vid~~~------~~~~~~~~~g~~~~~gd~~---~~~~l~~~~~~ 103 (183)
T 3c85_A 38 GHAQVLILGMGRIGTGAYDELRA--RYG---KISLGIEIRE------EAAQQHRSEGRNVISGDAT---DPDFWERILDT 103 (183)
T ss_dssp TTCSEEEECCSHHHHHHHHHHHH--HHC---SCEEEEESCH------HHHHHHHHTTCCEEECCTT---CHHHHHTBCSC
T ss_pred CCCcEEEECCCHHHHHHHHHHHh--ccC---CeEEEEECCH------HHHHHHHHCCCCEEEcCCC---CHHHHHhccCC
Confidence 356899999877 4444443432 3 4 4555332222 2345566789987765521 12223333 3
Q ss_pred ccCCEEEEE
Q 024345 203 QNTDFLVLA 211 (269)
Q Consensus 203 ~~~Dlivla 211 (269)
+++|++|++
T Consensus 104 ~~ad~vi~~ 112 (183)
T 3c85_A 104 GHVKLVLLA 112 (183)
T ss_dssp CCCCEEEEC
T ss_pred CCCCEEEEe
Confidence 488998885
No 131
>4etn_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.10A {Bacillus subtilis} PDB: 4eti_A 1zgg_A
Probab=65.15 E-value=13 Score=31.12 Aligned_cols=82 Identities=13% Similarity=0.202 Sum_probs=46.6
Q ss_pred CCCeeEEEEEeCCc---hHHHHHHHhhhc--CCCCceEEEE-eeC-CCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHH
Q 024345 126 DPKYKVAVLASKQE---HCLVDFLYGWQE--GKLPVEITCV-ISN-HDRGPNSHVIRFLERHGIPYHYLCAKENEREEEL 198 (269)
Q Consensus 126 ~~~~riav~~Sg~g---~~l~~ll~~~~~--g~l~~~i~~V-isn-~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l 198 (269)
.+++||.|+.+|+- .-.+.+++..-. | +..+|.-- +.. +...++..+++.++++||++- ..++.-. + +
T Consensus 32 ~~~~~VLFVC~gNiCRSpmAEai~r~~~~~~g-~~~~v~SAGt~~~~G~~~dp~a~~vl~e~Gidis-hrar~lt-~-~- 106 (184)
T 4etn_A 32 RGSMDIIFVCTGNTSRSPMAEALFKSIAEREG-LNVNVRSAGVFASPNGKATPHAVEALFEKHIALN-HVSSPLT-E-E- 106 (184)
T ss_dssp --CEEEEEEESSSSSHHHHHHHHHHHHHHHHT-CCEEEEEEETTCCTTCBCCHHHHHHHHHTTCCCC-CBCCBCC-H-H-
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHHHHHhcC-CcEEEEeeecCCcCCCCCCHHHHHHHHHcCCCch-hccCcCC-H-H-
Confidence 35689999999995 344555544322 2 23444332 221 111256678999999999987 3322111 1 1
Q ss_pred HHHhccCCEEEEEecc
Q 024345 199 LELVQNTDFLVLARYM 214 (269)
Q Consensus 199 ~~~l~~~Dlivla~y~ 214 (269)
.++.+|+|+...-.
T Consensus 107 --d~~~~DlIltMd~~ 120 (184)
T 4etn_A 107 --LMESADLVLAMTHQ 120 (184)
T ss_dssp --HHHHCSEEEESSHH
T ss_pred --HcCCCCEEEEcCcH
Confidence 12368999997643
No 132
>2cwd_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, structural genomics; 1.90A {Thermus thermophilus}
Probab=64.50 E-value=19 Score=29.18 Aligned_cols=82 Identities=15% Similarity=0.121 Sum_probs=48.4
Q ss_pred CCeeEEEEEeCCc---hHHHHHHHhhhc--CC-CCceEEEE-eeC-C-CCCCChhHHHHHHhCCCCeEEeCCCCCchHHH
Q 024345 127 PKYKVAVLASKQE---HCLVDFLYGWQE--GK-LPVEITCV-ISN-H-DRGPNSHVIRFLERHGIPYHYLCAKENEREEE 197 (269)
Q Consensus 127 ~~~riav~~Sg~g---~~l~~ll~~~~~--g~-l~~~i~~V-isn-~-~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~ 197 (269)
+++||.|+.+|+- .-.+.++...-. |. -..++.-- +.. + ...++..+.+.++++||++- .-.+.-. ++
T Consensus 3 ~~~~VLFVC~gN~cRSpmAEal~~~~~~~~gl~~~~~v~SAGt~~~~~g~~~~p~a~~~l~e~Gid~s-~~ar~l~-~~- 79 (161)
T 2cwd_A 3 RPVRVLFVCLGNICRSPMAEGIFRKLLKERGLEDRFEVDSAGTGAWHVGEPMDPRARRVLEEEGAYFP-HVARRLT-RE- 79 (161)
T ss_dssp CCEEEEEEESSSSSHHHHHHHHHHHHHHHHTCTTTEEEEEEESSCTTTTCCCCHHHHHHHHHHTCCCC-CCCCBCC-HH-
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHHHHHHcCCCCcEEEEecccCCCccCCCCCHHHHHHHHHcCcCcc-ccccCCC-Hh-
Confidence 6789999999995 344556654332 31 02344322 222 1 11266789999999999986 4332211 11
Q ss_pred HHHHhccCCEEEEEecc
Q 024345 198 LLELVQNTDFLVLARYM 214 (269)
Q Consensus 198 l~~~l~~~Dlivla~y~ 214 (269)
.++.+|+|+...-.
T Consensus 80 ---~~~~~DlIi~M~~~ 93 (161)
T 2cwd_A 80 ---DVLAYDHILVMDRE 93 (161)
T ss_dssp ---HHHHCSEEEESSHH
T ss_pred ---HhccCCEEEECChH
Confidence 22368999998653
No 133
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=64.44 E-value=9.5 Score=29.48 Aligned_cols=69 Identities=14% Similarity=0.208 Sum_probs=39.9
Q ss_pred CeeEEEEEeCCchHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhccCCE
Q 024345 128 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTDF 207 (269)
Q Consensus 128 ~~riav~~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~~~Dl 207 (269)
.+||+|+|+|.- -..++..+... .++ + ++.++ ......++++++|+++...+ ++.+.++++|+
T Consensus 21 ~~~v~iiG~G~i--G~~~a~~l~~~--g~~-v-~v~~r---~~~~~~~~a~~~~~~~~~~~--------~~~~~~~~~Di 83 (144)
T 3oj0_A 21 GNKILLVGNGML--ASEIAPYFSYP--QYK-V-TVAGR---NIDHVRAFAEKYEYEYVLIN--------DIDSLIKNNDV 83 (144)
T ss_dssp CCEEEEECCSHH--HHHHGGGCCTT--TCE-E-EEEES---CHHHHHHHHHHHTCEEEECS--------CHHHHHHTCSE
T ss_pred CCEEEEECCCHH--HHHHHHHHHhC--CCE-E-EEEcC---CHHHHHHHHHHhCCceEeec--------CHHHHhcCCCE
Confidence 469999998752 22333333221 356 3 34455 23456778899887655432 12334558999
Q ss_pred EEEEec
Q 024345 208 LVLARY 213 (269)
Q Consensus 208 ivla~y 213 (269)
++.+--
T Consensus 84 vi~at~ 89 (144)
T 3oj0_A 84 IITATS 89 (144)
T ss_dssp EEECSC
T ss_pred EEEeCC
Confidence 998754
No 134
>1jl3_A Arsenate reductase; alpha-beta fold, PTP-loop, oxidoreductase; 1.60A {Bacillus subtilis} SCOP: c.44.1.1 PDB: 1z2d_A 1z2e_A 2ipa_B
Probab=64.29 E-value=20 Score=28.06 Aligned_cols=91 Identities=11% Similarity=0.168 Sum_probs=51.9
Q ss_pred CeeEEEEEeCCc---hHHHHHHHhhhcCCCCceEEEE-eeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhc
Q 024345 128 KYKVAVLASKQE---HCLVDFLYGWQEGKLPVEITCV-ISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 203 (269)
Q Consensus 128 ~~riav~~Sg~g---~~l~~ll~~~~~g~l~~~i~~V-isn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~ 203 (269)
++||.|+.+|+- .-.+.++...-.+ ..++.-- +..+ .++..+.+.++++||++-..-++. -+++ .++
T Consensus 3 ~~~VLFVC~gN~cRSpmAEai~~~~~~~--~~~v~SAGt~~~--~~~p~a~~~l~~~Gid~s~~~sr~--l~~~---~~~ 73 (139)
T 1jl3_A 3 NKIIYFLCTGNSCRSQMAEGWAKQYLGD--EWKVYSAGIEAH--GLNPNAVKAMKEVGIDISNQTSDI--IDSD---ILN 73 (139)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHSCT--TEEEEEEESSCC--CCCHHHHHHHHHTTCCCTTCCCCB--CCHH---HHT
T ss_pred CCeEEEEcCCchHHHHHHHHHHHHhCCC--CEEEEcCcCCCC--CCCHHHHHHHHHcCCCcccCccCc--CCHH---Hhh
Confidence 358999999995 4456666654322 2444322 2223 267789999999999874322221 1111 234
Q ss_pred cCCEEEEEecceeee-cccccccccc
Q 024345 204 NTDFLVLARYMQVNR-IRLYVAQLFS 228 (269)
Q Consensus 204 ~~Dlivla~y~~il~-l~~~~~~~iN 228 (269)
++|+|+... ...-. +..+++++.-
T Consensus 74 ~~D~Ii~m~-~~~~~~~p~~~~~~~~ 98 (139)
T 1jl3_A 74 NADLVVTLC-GDAADKCPMTPPHVKR 98 (139)
T ss_dssp TCSEEEECS-HHHHHHCCCCCTTSEE
T ss_pred cCCEEEEeC-chHHhhCCCCCCCceE
Confidence 789999873 23211 4445554433
No 135
>3mah_A Aspartokinase; aspartate kinase, structural genomics, MCSG, transferase, PSI-2; 2.31A {Porphyromonas gingivalis}
Probab=64.26 E-value=9.3 Score=30.62 Aligned_cols=62 Identities=15% Similarity=0.093 Sum_probs=42.0
Q ss_pred ceEEEEEEcC---CCcChHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHhhhhhhcc
Q 024345 41 THGIHVFHCP---DEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNA 115 (269)
Q Consensus 41 ~~~iItV~G~---DrpGIVa~VS~~La~~giNI~dl~~~~~~~~g~F~m~~~v~~p~~~~~~~~L~e~L~~la~el~l 115 (269)
.-..++++|. ++||+.+++.+.|+ |+||.-++|.. ..-.+.+.++ .++..+++..|-++|.+
T Consensus 87 ~~a~vsvvG~gm~~~~gv~a~~f~aL~--~Ini~~isqg~----Se~~is~vv~-------~~d~~~a~~~Lh~~f~~ 151 (157)
T 3mah_A 87 DMVIICIVGDMEWDNVGFEARIINALK--GVPVRMISYGG----SNYNVSVLVK-------AEDKKKALIALSNKLFN 151 (157)
T ss_dssp EEEEEEEEC------CCHHHHHHHTTT--TSCCSEEEECS----SSSCEEEEEE-------GGGHHHHHHHHHHHHHC
T ss_pred CeEEEEEECCCcccCccHHHHHHHHhC--CCCeEEEeeCC----CCCEEEEEEc-------HHHHHHHHHHHHHHHhc
Confidence 3468899997 68999999999999 99999998732 1223334443 24566777777777754
No 136
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=64.02 E-value=18 Score=31.75 Aligned_cols=67 Identities=15% Similarity=0.171 Sum_probs=38.3
Q ss_pred CCeeEEEEEeCC-ch--HHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhc
Q 024345 127 PKYKVAVLASKQ-EH--CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 203 (269)
Q Consensus 127 ~~~riav~~Sg~-g~--~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~ 203 (269)
+++||+|+|.|. |. .+..+.. .+ .+++++|+... .....++++++|+|++ + ..+ ++ ..
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~~l~~---~~--~~~lvav~d~~----~~~~~~~~~~~g~~~~--~----~~~-~l---~~ 64 (319)
T 1tlt_A 4 KKLRIGVVGLGGIAQKAWLPVLAA---AS--DWTLQGAWSPT----RAKALPICESWRIPYA--D----SLS-SL---AA 64 (319)
T ss_dssp -CEEEEEECCSTHHHHTHHHHHHS---CS--SEEEEEEECSS----CTTHHHHHHHHTCCBC--S----SHH-HH---HT
T ss_pred CcceEEEECCCHHHHHHHHHHHHh---CC--CeEEEEEECCC----HHHHHHHHHHcCCCcc--C----cHH-Hh---hc
Confidence 468999999987 33 2333322 12 36777665533 2346778888998832 1 112 22 12
Q ss_pred cCCEEEEEe
Q 024345 204 NTDFLVLAR 212 (269)
Q Consensus 204 ~~Dlivla~ 212 (269)
++|+++++-
T Consensus 65 ~~D~V~i~t 73 (319)
T 1tlt_A 65 SCDAVFVHS 73 (319)
T ss_dssp TCSEEEECS
T ss_pred CCCEEEEeC
Confidence 678777764
No 137
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=63.77 E-value=12 Score=33.06 Aligned_cols=65 Identities=12% Similarity=0.166 Sum_probs=37.4
Q ss_pred eeEEEEEeCC-chH--HHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhc--
Q 024345 129 YKVAVLASKQ-EHC--LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ-- 203 (269)
Q Consensus 129 ~riav~~Sg~-g~~--l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~-- 203 (269)
+||+|+|.|. |.. +..+. ++ ..++++|+... .....++++++|+|..+ . + +.++++
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~----~~--~~~~vav~d~~----~~~~~~~~~~~g~~~~~-~----~----~~~~l~~~ 61 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIR----AT--GGEVVSMMSTS----AERGAAYATENGIGKSV-T----S----VEELVGDP 61 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHH----HT--TCEEEEEECSC----HHHHHHHHHHTTCSCCB-S----C----HHHHHTCT
T ss_pred CeEEEEcccHHHHHhhhHHhh----cC--CCeEEEEECCC----HHHHHHHHHHcCCCccc-C----C----HHHHhcCC
Confidence 4899999986 333 23332 22 36777665433 34567888999987322 1 1 123343
Q ss_pred cCCEEEEEe
Q 024345 204 NTDFLVLAR 212 (269)
Q Consensus 204 ~~Dlivla~ 212 (269)
++|+++++-
T Consensus 62 ~~D~V~i~t 70 (332)
T 2glx_A 62 DVDAVYVST 70 (332)
T ss_dssp TCCEEEECS
T ss_pred CCCEEEEeC
Confidence 577777764
No 138
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Probab=63.49 E-value=11 Score=36.57 Aligned_cols=64 Identities=11% Similarity=-0.010 Sum_probs=49.4
Q ss_pred ceEEEEEEcC--CCcChHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHhhhhhhcc
Q 024345 41 THGIHVFHCP--DEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNA 115 (269)
Q Consensus 41 ~~~iItV~G~--DrpGIVa~VS~~La~~giNI~dl~~~~~~~~g~F~m~~~v~~p~~~~~~~~L~e~L~~la~el~l 115 (269)
.-..|+++|. .+||+.+++.+.|++.|+||.-++|. +..-.+.+.|+ .++..+++..+-+.|.+
T Consensus 419 ~~a~VsiVG~m~~~~Gvaa~~f~aL~~~~InI~mIsqG----sSei~Is~vV~-------~~d~~~Av~aLH~~f~~ 484 (510)
T 2cdq_A 419 GRAIISLIGNVQHSSLILERAFHVLYTKGVNVQMISQG----ASKVNISFIVN-------EAEAEGCVQALHKSFFE 484 (510)
T ss_dssp EEEEEEEEECGGGHHHHHHHHHHHHHHHTCCCSEEEEC----TTCSEEEEEEE-------HHHHHHHHHHHHHHHHS
T ss_pred CcEEEEEEEECCCChhHHHHHHHHHHHCCCCEEEEEec----CCcceEEEEEe-------HHHHHHHHHHHHHHHhc
Confidence 4567999998 78899999999999999999999873 22334444443 36678888888888864
No 139
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=62.59 E-value=8.3 Score=30.21 Aligned_cols=76 Identities=13% Similarity=0.069 Sum_probs=38.4
Q ss_pred CCCCCeeEEEEEeCC-chHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHH-hCCCCeEEeCCCCCchHHHHHHH
Q 024345 124 DIDPKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLE-RHGIPYHYLCAKENEREEELLEL 201 (269)
Q Consensus 124 ~~~~~~riav~~Sg~-g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~-~~gIP~~~~~~~~~~~e~~l~~~ 201 (269)
...+.++|+|+|.|. |..+-..+.. .| .+|.++-.+.+ ..+.++ +.|+.+...+.. . .+.+.+.
T Consensus 15 ~~~~~~~v~IiG~G~iG~~la~~L~~--~g---~~V~vid~~~~------~~~~~~~~~g~~~~~~d~~--~-~~~l~~~ 80 (155)
T 2g1u_A 15 KKQKSKYIVIFGCGRLGSLIANLASS--SG---HSVVVVDKNEY------AFHRLNSEFSGFTVVGDAA--E-FETLKEC 80 (155)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHH--TT---CEEEEEESCGG------GGGGSCTTCCSEEEESCTT--S-HHHHHTT
T ss_pred cccCCCcEEEECCCHHHHHHHHHHHh--CC---CeEEEEECCHH------HHHHHHhcCCCcEEEecCC--C-HHHHHHc
Confidence 344668999999877 4444443432 34 46654433321 123333 567765543321 1 2223222
Q ss_pred -hccCCEEEEEec
Q 024345 202 -VQNTDFLVLARY 213 (269)
Q Consensus 202 -l~~~Dlivla~y 213 (269)
++++|+++.+--
T Consensus 81 ~~~~ad~Vi~~~~ 93 (155)
T 2g1u_A 81 GMEKADMVFAFTN 93 (155)
T ss_dssp TGGGCSEEEECSS
T ss_pred CcccCCEEEEEeC
Confidence 447999887643
No 140
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=61.90 E-value=16 Score=34.19 Aligned_cols=70 Identities=20% Similarity=0.265 Sum_probs=41.2
Q ss_pred CCeeEEEEEeCC-chHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHh--c
Q 024345 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELV--Q 203 (269)
Q Consensus 127 ~~~riav~~Sg~-g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l--~ 203 (269)
.+++|+|+|.|. |..+-..|.. .| +++++|=.|+ ...+.+++.|+++++-+.. +.++++.. +
T Consensus 3 ~~~~viIiG~Gr~G~~va~~L~~--~g---~~vvvId~d~------~~v~~~~~~g~~vi~GDat----~~~~L~~agi~ 67 (413)
T 3l9w_A 3 HGMRVIIAGFGRFGQITGRLLLS--SG---VKMVVLDHDP------DHIETLRKFGMKVFYGDAT----RMDLLESAGAA 67 (413)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHH--TT---CCEEEEECCH------HHHHHHHHTTCCCEESCTT----CHHHHHHTTTT
T ss_pred CCCeEEEECCCHHHHHHHHHHHH--CC---CCEEEEECCH------HHHHHHHhCCCeEEEcCCC----CHHHHHhcCCC
Confidence 346899999887 4555555543 34 4555443332 3466778899999987632 12344333 2
Q ss_pred cCCEEEEE
Q 024345 204 NTDFLVLA 211 (269)
Q Consensus 204 ~~Dlivla 211 (269)
++|++|++
T Consensus 68 ~A~~viv~ 75 (413)
T 3l9w_A 68 KAEVLINA 75 (413)
T ss_dssp TCSEEEEC
T ss_pred ccCEEEEC
Confidence 67776664
No 141
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=61.61 E-value=31 Score=30.60 Aligned_cols=55 Identities=16% Similarity=0.275 Sum_probs=33.3
Q ss_pred CCCCeeEEEEEeCC-ch--HHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeC
Q 024345 125 IDPKYKVAVLASKQ-EH--CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (269)
Q Consensus 125 ~~~~~riav~~Sg~-g~--~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~ 188 (269)
+..+|||+|+..+. |+ .+..|.+.+++- .++|..+.+ . ...+..++.|++++.++
T Consensus 12 ~~~~MrIl~~~~~~~gh~~~~~~La~~L~~~--GheV~v~~~-~------~~~~~~~~~G~~~~~~~ 69 (398)
T 4fzr_A 12 RGSHMRILVIAGCSEGFVMPLVPLSWALRAA--GHEVLVAAS-E------NMGPTVTGAGLPFAPTC 69 (398)
T ss_dssp ---CCEEEEECCSSHHHHGGGHHHHHHHHHT--TCEEEEEEE-G------GGHHHHHHTTCCEEEEE
T ss_pred CCCceEEEEEcCCCcchHHHHHHHHHHHHHC--CCEEEEEcC-H------HHHHHHHhCCCeeEecC
Confidence 45668999987665 33 234555554433 267764443 3 14677888999998875
No 142
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=61.50 E-value=25 Score=30.63 Aligned_cols=79 Identities=11% Similarity=0.088 Sum_probs=48.1
Q ss_pred CCeeEEEEEeC-----Cc--hHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCC----chH
Q 024345 127 PKYKVAVLASK-----QE--HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKEN----ERE 195 (269)
Q Consensus 127 ~~~riav~~Sg-----~g--~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~----~~e 195 (269)
++|||+++... .| ..+..+.+.+ .| ++|..+..+. .......+....|++++.++.... ..-
T Consensus 3 ~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L-~g---~~v~v~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (394)
T 3okp_A 3 ASRKTLVVTNDFPPRIGGIQSYLRDFIATQ-DP---ESIVVFASTQ---NAEEAHAYDKTLDYEVIRWPRSVMLPTPTTA 75 (394)
T ss_dssp -CCCEEEEESCCTTSCSHHHHHHHHHHTTS-CG---GGEEEEEECS---SHHHHHHHHTTCSSEEEEESSSSCCSCHHHH
T ss_pred CCceEEEEeCccCCccchHHHHHHHHHHHh-cC---CeEEEEECCC---CccchhhhccccceEEEEccccccccchhhH
Confidence 57899999861 23 4556666655 33 6777666654 222235566788899888773221 112
Q ss_pred HHHHHHhc--cCCEEEEEe
Q 024345 196 EELLELVQ--NTDFLVLAR 212 (269)
Q Consensus 196 ~~l~~~l~--~~Dlivla~ 212 (269)
..+.+.++ ++|+|++..
T Consensus 76 ~~l~~~~~~~~~Dvv~~~~ 94 (394)
T 3okp_A 76 HAMAEIIREREIDNVWFGA 94 (394)
T ss_dssp HHHHHHHHHTTCSEEEESS
T ss_pred HHHHHHHHhcCCCEEEECC
Confidence 45666666 899998643
No 143
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=60.65 E-value=30 Score=31.63 Aligned_cols=102 Identities=13% Similarity=0.119 Sum_probs=54.6
Q ss_pred CCeeEEEEEeCCchHHHHHHHhhhcCCCCceEEEEeeCCCCC---CChhHHHH----HHh--CCCCeEEeCCCCCchHHH
Q 024345 127 PKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRG---PNSHVIRF----LER--HGIPYHYLCAKENEREEE 197 (269)
Q Consensus 127 ~~~riav~~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~---~~~~v~~~----a~~--~gIP~~~~~~~~~~~e~~ 197 (269)
...||+++|-+.......++..+.. ++.++ .++.|+.. |+..+.+. |++ .|..+.... +
T Consensus 160 ~gl~va~vGD~~~~va~Sl~~~~~~--~G~~v--~~~~P~~~~~~p~~~~~~~~~~~~~~~~~g~~v~~~~--------d 227 (328)
T 3grf_A 160 KGIKFAYCGDSMNNVTYDLMRGCAL--LGMEC--HVCCPDHKDFKPIKEVIDECEEIIAKHGTGGSIKIFH--------D 227 (328)
T ss_dssp GGCCEEEESCCSSHHHHHHHHHHHH--HTCEE--EEECCSSGGGSCCHHHHHHHHHHHHHHTCCCEEEEES--------S
T ss_pred CCcEEEEeCCCCcchHHHHHHHHHH--cCCEE--EEECChHhhhCCCHHHHHHHHHHHhhccCCCeEEEEc--------C
Confidence 4579999988743333444433211 22454 34444331 33334444 444 687776643 2
Q ss_pred HHHHhccCCEEEEEec--cee----------------ee---cccccccccccCCCccccCCCCCCCCCcH
Q 024345 198 LLELVQNTDFLVLARY--MQV----------------NR---IRLYVAQLFSCLVTEQLTVLNSSLGGINI 247 (269)
Q Consensus 198 l~~~l~~~Dlivla~y--~~i----------------l~---l~~~~~~~iN~~~~~iHpSLLP~~rG~~p 247 (269)
+.+.++++|+|..-.| |+| +. ++..+..++= .|| ||.+||...
T Consensus 228 ~~eav~~aDvvytd~W~sm~iq~er~~~~~~~~~~y~vt~~~l~~a~~~ai~-----mH~--lPa~Rg~EI 291 (328)
T 3grf_A 228 CKKGCEGVDVVYTDSWMSYHITKEQKEARLKVLTPFQVDDAVMAVTSKRSIF-----MNC--LPATRGEEQ 291 (328)
T ss_dssp HHHHHTTCSEEEECCCC--------CCTHHHHHGGGCBCHHHHTTSCTTCEE-----EEC--SCCCTTTTB
T ss_pred HHHHhcCCCEEEecCccccCCcHHHHHHHHHHhcCCCCCHHHHHhcCCCCEE-----ECC--CCCCCCCcc
Confidence 3456679999987443 221 11 3333344555 788 799999543
No 144
>1jf8_A Arsenate reductase; ptpase I fold, P-loop, sulfinic acid, oxidoreductase; 1.12A {Staphylococcus aureus} SCOP: c.44.1.1 PDB: 1jfv_A 2fxi_A 1lju_A* 1rxi_A 1rxe_A 1ljl_A 2cd7_A 1lk0_A
Probab=59.22 E-value=26 Score=27.32 Aligned_cols=90 Identities=8% Similarity=0.090 Sum_probs=51.1
Q ss_pred CeeEEEEEeCCc---hHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhcc
Q 024345 128 KYKVAVLASKQE---HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQN 204 (269)
Q Consensus 128 ~~riav~~Sg~g---~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~~ 204 (269)
++||.|.-+|+- .-.+.++...-.+ ..++.--=+... .++..+.+.++++||++...-++. -+++. ++.
T Consensus 3 ~~~VLFVC~gN~cRSpmAEa~~~~~~~~--~~~v~SAGt~~~-~~~p~a~~~l~~~Gid~s~~~ar~--l~~~~---~~~ 74 (131)
T 1jf8_A 3 KKTIYFISTGNSARSQMAEGWGKEILGE--GWNVYSAGIETH-GVNPKAIEAMKEVDIDISNHTSDL--IDNDI---LKQ 74 (131)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHSTT--TEEEEEEESSCC-CCCHHHHHHHHHTTCCCTTCCCCB--CCHHH---HHH
T ss_pred CCEEEEEcCCcchHHHHHHHHHHHhcCC--CEEEEcCcCCCC-CCCHHHHHHHHHcCCCcccCcccc--CChHH---hcc
Confidence 468999999995 4456666654322 344433222222 267789999999999874322221 11111 236
Q ss_pred CCEEEEEecceeee-cccccccc
Q 024345 205 TDFLVLARYMQVNR-IRLYVAQL 226 (269)
Q Consensus 205 ~Dlivla~y~~il~-l~~~~~~~ 226 (269)
+|+|+... ...-. +..+++++
T Consensus 75 ~D~Ii~m~-~~~~~~~p~~~~~~ 96 (131)
T 1jf8_A 75 SDLVVTLC-SDADNNCPILPPNV 96 (131)
T ss_dssp CSEEEECS-HHHHHHSCCCCTTS
T ss_pred CCEEEEcC-cHHHhhCcCCCCCc
Confidence 89999884 33211 44455544
No 145
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=59.03 E-value=21 Score=30.98 Aligned_cols=65 Identities=12% Similarity=0.079 Sum_probs=34.3
Q ss_pred CCeeEEEEEeCC-chHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhccC
Q 024345 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNT 205 (269)
Q Consensus 127 ~~~riav~~Sg~-g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~~~ 205 (269)
.++||+|+|.|. |..+-..+.. .| ++|. +.+++ ....+.+.+.|+... . + ..+.++++
T Consensus 2 ~m~~I~iiG~G~mG~~~a~~l~~--~G---~~V~--~~d~~----~~~~~~~~~~g~~~~--~----~----~~~~~~~a 60 (302)
T 2h78_A 2 HMKQIAFIGLGHMGAPMATNLLK--AG---YLLN--VFDLV----QSAVDGLVAAGASAA--R----S----ARDAVQGA 60 (302)
T ss_dssp -CCEEEEECCSTTHHHHHHHHHH--TT---CEEE--EECSS----HHHHHHHHHTTCEEC--S----S----HHHHHTTC
T ss_pred CCCEEEEEeecHHHHHHHHHHHh--CC---CeEE--EEcCC----HHHHHHHHHCCCeEc--C----C----HHHHHhCC
Confidence 468999999998 5544333322 34 4543 44552 223344445565322 1 1 22344577
Q ss_pred CEEEEEe
Q 024345 206 DFLVLAR 212 (269)
Q Consensus 206 Dlivla~ 212 (269)
|+|+++-
T Consensus 61 Dvvi~~v 67 (302)
T 2h78_A 61 DVVISML 67 (302)
T ss_dssp SEEEECC
T ss_pred CeEEEEC
Confidence 8887764
No 146
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=58.32 E-value=29 Score=30.74 Aligned_cols=72 Identities=17% Similarity=0.275 Sum_probs=44.0
Q ss_pred eeEEEEEeCC-----chHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhc
Q 024345 129 YKVAVLASKQ-----EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 203 (269)
Q Consensus 129 ~riav~~Sg~-----g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~ 203 (269)
|||+|.+-++ ||.++-|.=+ ..+. ++..+ |+.. +.. +.++.|.|++.++.. ..+++.++++
T Consensus 1 mki~ir~Da~~~IG~GHvmRcl~LA---~~l~-~v~F~-~~~~--~~~----~~~~~g~~v~~l~~~---d~~~~~~~l~ 66 (282)
T 3hbm_A 1 MKVLFRSDSSSQIGFGHIKRDLVLA---KQYS-DVSFA-CLPL--EGS----LIDEIPYPVYELSSE---SIYELINLIK 66 (282)
T ss_dssp CCEEEEECCBTTTBSHHHHHHHHHH---TTCS-SEEEE-ECCC--TTC----CGGGCCSCEEECSSS---CHHHHHHHHH
T ss_pred CEEEEEEecCCCccccHHHHHHHHH---HHHH-hCEEE-EecC--cHh----HHHHCCCeEEEcCcc---CHHHHHHHHH
Confidence 5777777665 4766655322 2333 56554 4432 111 233459999987632 2456778776
Q ss_pred --cCCEEEEEecc
Q 024345 204 --NTDFLVLARYM 214 (269)
Q Consensus 204 --~~Dlivla~y~ 214 (269)
++|++|+-+|.
T Consensus 67 ~~~~d~lIvD~Y~ 79 (282)
T 3hbm_A 67 EEKFELLIIDHYG 79 (282)
T ss_dssp HHTCSEEEEECTT
T ss_pred hCCCCEEEEECCC
Confidence 89999999885
No 147
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=58.23 E-value=36 Score=30.82 Aligned_cols=121 Identities=12% Similarity=0.113 Sum_probs=64.7
Q ss_pred CCHHHHHHHHHhhhhhhccceeeeeecCCCCCeeEEEEEeCCchHHHHHHHhhhcCCCCceEEEEeeCCCCC-CChhHHH
Q 024345 97 WPREQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRG-PNSHVIR 175 (269)
Q Consensus 97 ~~~~~L~e~L~~la~el~l~~~~~~~~~~~~~~riav~~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~-~~~~v~~ 175 (269)
..+.+.-.+|..+-+.+|- + .+..||+++|-++ .....++..+.. ++.++ +++.|+.. ++..+.+
T Consensus 124 ~HPtQaLaDl~Ti~e~~g~----l-----~~gl~va~vGD~~-~va~Sl~~~~~~--~G~~v--~~~~P~~~~~~~~~~~ 189 (307)
T 3tpf_A 124 YHPTQVLGDLFTIKEWNKM----Q-----NGIAKVAFIGDSN-NMCNSWLITAAI--LGFEI--SIAMPKNYKISPEIWE 189 (307)
T ss_dssp CCHHHHHHHHHHHHHTTCC----G-----GGCCEEEEESCSS-HHHHHHHHHHHH--HTCEE--EEECCTTCCCCHHHHH
T ss_pred cCcHHHHHHHHHHHHHhCC----C-----CCCCEEEEEcCCC-ccHHHHHHHHHH--cCCEE--EEECCCccCCCHHHHH
Confidence 3455555555555555552 1 1157899998754 223333332211 12454 34444332 3444444
Q ss_pred ----HHHhCCCCeEEeCCCCCchHHHHHHHhccCCEEEEEeccee-----------------ee---cccccccccccCC
Q 024345 176 ----FLERHGIPYHYLCAKENEREEELLELVQNTDFLVLARYMQV-----------------NR---IRLYVAQLFSCLV 231 (269)
Q Consensus 176 ----~a~~~gIP~~~~~~~~~~~e~~l~~~l~~~Dlivla~y~~i-----------------l~---l~~~~~~~iN~~~ 231 (269)
.|++.|..+.... ++.+.++++|+|.+-.|-.+ +. ++..+..++=
T Consensus 190 ~~~~~a~~~g~~~~~~~--------d~~eav~~aDvvyt~~w~smg~e~~~~~~~~~~~~y~v~~e~l~~a~~~ai~--- 258 (307)
T 3tpf_A 190 FAMKQALISGAKISLGY--------DKFEALKDKDVVITDTWVSMGEENEKERKIKEFEGFMIDEKAMSVANKDAIL--- 258 (307)
T ss_dssp HHHHHHHHHTCEEEEES--------CHHHHHTTCSEEEECCSSCTTGGGGHHHHHHHTGGGCBCHHHHHHSCTTCEE---
T ss_pred HHHHHHHHcCCeEEEEc--------CHHHHhcCCCEEEecCcccCCchhhHHHHHHHhcccccCHHHHHhcCCCcEE---
Confidence 4457887776643 13356678999999886322 11 3333334555
Q ss_pred CccccCCCCCCCCCc
Q 024345 232 TEQLTVLNSSLGGIN 246 (269)
Q Consensus 232 ~~iHpSLLP~~rG~~ 246 (269)
.|| ||.+||..
T Consensus 259 --mH~--lPa~Rg~E 269 (307)
T 3tpf_A 259 --LHC--LPAYRGYE 269 (307)
T ss_dssp --EEC--SCCCBTTT
T ss_pred --ECC--CCCCCCce
Confidence 788 79999954
No 148
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=57.98 E-value=6.9 Score=28.37 Aligned_cols=41 Identities=22% Similarity=0.274 Sum_probs=25.7
Q ss_pred HHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeC
Q 024345 146 LYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (269)
Q Consensus 146 l~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~ 188 (269)
++.+++|+ +.++.+-.|-++.-..++..+|+++|||+++++
T Consensus 20 ~kai~~gk--aklViiA~D~~~~~~~~i~~lc~~~~Ip~~~v~ 60 (82)
T 3v7e_A 20 VKALKRGS--VKEVVVAKDADPILTSSVVSLAEDQGISVSMVE 60 (82)
T ss_dssp HHHHTTTC--EEEEEEETTSCHHHHHHHHHHHHHHTCCEEEES
T ss_pred HHHHHcCC--eeEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEC
Confidence 34444564 555544444421011467888999999999987
No 149
>3k32_A Uncharacterized protein MJ0690; predicted subunit of tRNA methyltransferase, methanocaldococcus jannaschii DSM , PSI- 2; 2.50A {Methanocaldococcus jannaschii}
Probab=57.47 E-value=20 Score=29.82 Aligned_cols=57 Identities=14% Similarity=-0.035 Sum_probs=38.6
Q ss_pred CeeEEEEEeCCc--hHHHHHHHhhhcCCCCceEEEEeeCCCCC-CChhHHHHHHhCCCCeEEeCC
Q 024345 128 KYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRG-PNSHVIRFLERHGIPYHYLCA 189 (269)
Q Consensus 128 ~~riav~~Sg~g--~~l~~ll~~~~~g~l~~~i~~Visn~~~~-~~~~v~~~a~~~gIP~~~~~~ 189 (269)
++||++..||.- +.+..++.. .| .++.++..++... .-..+.++|+++|||++.++.
T Consensus 6 ~~kv~v~~SGG~DS~~ll~ll~~--~g---~~v~~~~v~~~~~~~~~~~~~~a~~lgi~~~~~~~ 65 (203)
T 3k32_A 6 LMDVHVLFSGGKDSSLSAVILKK--LG---YNPHLITINFGVIPSYKLAEETAKILGFKHKVITL 65 (203)
T ss_dssp CEEEEEECCCSHHHHHHHHHHHH--TT---EEEEEEEEECSSSCTTHHHHHHHHHHTCEEEEEEC
T ss_pred CCeEEEEEECcHHHHHHHHHHHH--cC---CCeEEEEEeCCCchHHHHHHHHHHHhCCCEEEEEC
Confidence 468999999974 344444432 33 5777776665321 235688999999999998873
No 150
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=57.44 E-value=8.6 Score=34.20 Aligned_cols=34 Identities=15% Similarity=0.202 Sum_probs=19.7
Q ss_pred CCeeEEEEEeCC-chHHHHHHHhhhcCCCCceEEEEeeC
Q 024345 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISN 164 (269)
Q Consensus 127 ~~~riav~~Sg~-g~~l~~ll~~~~~g~l~~~i~~Visn 164 (269)
+++||+|+|.|. |..+...+.. .+ ..++++|+..
T Consensus 8 ~~irv~IIG~G~iG~~~~~~l~~--~~--~~elvav~d~ 42 (304)
T 3bio_A 8 KKIRAAIVGYGNIGRYALQALRE--AP--DFEIAGIVRR 42 (304)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH--CT--TEEEEEEECC
T ss_pred CCCEEEEECChHHHHHHHHHHhc--CC--CCEEEEEEcC
Confidence 368999999986 3333222221 12 3677776643
No 151
>1q0q_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase; HET: DXP NDP; 1.90A {Escherichia coli} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1q0l_A* 1q0h_A* 3r0i_A* 1k5h_A 1onn_A 1ono_A 1onp_A* 1jvs_A* 1t1r_A* 1t1s_A* 2egh_A* 3anm_A* 3anl_A* 3ann_A* 3iie_A
Probab=56.75 E-value=24 Score=33.37 Aligned_cols=117 Identities=11% Similarity=0.107 Sum_probs=64.9
Q ss_pred CCCCCeeEEEEEeCC--chHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHH
Q 024345 124 DIDPKYKVAVLASKQ--EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLEL 201 (269)
Q Consensus 124 ~~~~~~riav~~Sg~--g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~ 201 (269)
....++||++|||.. |.+-.+++.+ ..-.++|+++..++ .-....+-|++++-.+..+... ...+++.+.
T Consensus 5 ~~~~~k~i~ILGSTGSIGtqtLdVi~~---~pd~f~V~aL~ag~---nv~~L~~q~~~f~p~~v~v~d~--~~~~~L~~~ 76 (406)
T 1q0q_A 5 HHSGMKQLTILGSTGSIGCSTLDVVRH---NPEHFRVVALVAGK---NVTRMVEQCLEFSPRYAVMDDE--ASAKLLKTM 76 (406)
T ss_dssp ----CEEEEEETTTSHHHHHHHHHHHH---CTTTEEEEEEEESS---CHHHHHHHHHHHCCSEEEESSH--HHHHHHHHH
T ss_pred ccCCceeEEEEccCcHHHHHHHHHHHh---CCCccEEEEEEcCC---CHHHHHHHHHHhCCCEEEEcCH--HHHHHHHHH
Confidence 345778999999987 4444456654 22248999988875 2345778899999887776421 111334444
Q ss_pred h--ccCCEEEEEecceeeeccc-c-cccccccCCCccccCCCCCCCCCcHHHHHHHcCCC
Q 024345 202 V--QNTDFLVLARYMQVNRIRL-Y-VAQLFSCLVTEQLTVLNSSLGGINISLSSFDATIE 257 (269)
Q Consensus 202 l--~~~Dlivla~y~~il~l~~-~-~~~~iN~~~~~iHpSLLP~~rG~~p~~~A~~~G~~ 257 (269)
+ .+.+.-|++|---+..+.. . ..-++| =..-+-|..|...|+.+|-+
T Consensus 77 l~~~~~~~~v~~G~~~l~~~a~~~~~D~Vv~---------AIvG~aGL~PTlaAi~aGK~ 127 (406)
T 1q0q_A 77 LQQQGSRTEVLSGQQAACDMAALEDVDQVMA---------AIVGAAGLLPTLAAIRAGKT 127 (406)
T ss_dssp HHHTTCCCEEEESHHHHHHHHTCTTCCEEEE---------CCSSGGGHHHHHHHHHTTCE
T ss_pred hhcCCCCcEEEeCHHHHHHHhcCCCCCEEEE---------ccccHhHHHHHHHHHHCCCe
Confidence 4 2333334444433333211 1 122344 23345577788888888844
No 152
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=56.47 E-value=7.7 Score=33.00 Aligned_cols=70 Identities=13% Similarity=0.217 Sum_probs=38.2
Q ss_pred CeeEEEEEeCC-chHH-HHHHHhhhcCCCC-ceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhcc
Q 024345 128 KYKVAVLASKQ-EHCL-VDFLYGWQEGKLP-VEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQN 204 (269)
Q Consensus 128 ~~riav~~Sg~-g~~l-~~ll~~~~~g~l~-~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~~ 204 (269)
++||+|+|.|. |..+ ..|.+ .|..+ .+|. +.++ ....+.++++++|+.+. . +. .+.+++
T Consensus 2 ~~~i~iIG~G~mG~~~a~~l~~---~g~~~~~~V~--~~~r---~~~~~~~~~~~~g~~~~--~----~~----~e~~~~ 63 (247)
T 3gt0_A 2 DKQIGFIGCGNMGMAMIGGMIN---KNIVSSNQII--CSDL---NTANLKNASEKYGLTTT--T----DN----NEVAKN 63 (247)
T ss_dssp CCCEEEECCSHHHHHHHHHHHH---TTSSCGGGEE--EECS---CHHHHHHHHHHHCCEEC--S----CH----HHHHHH
T ss_pred CCeEEEECccHHHHHHHHHHHh---CCCCCCCeEE--EEeC---CHHHHHHHHHHhCCEEe--C----Ch----HHHHHh
Confidence 36999999998 4443 33333 34222 2443 4555 23456666667786532 1 11 123346
Q ss_pred CCEEEEEecce
Q 024345 205 TDFLVLARYMQ 215 (269)
Q Consensus 205 ~Dlivla~y~~ 215 (269)
+|+|+++--.+
T Consensus 64 aDvVilav~~~ 74 (247)
T 3gt0_A 64 ADILILSIKPD 74 (247)
T ss_dssp CSEEEECSCTT
T ss_pred CCEEEEEeCHH
Confidence 88888875433
No 153
>2lbw_A H/ACA ribonucleoprotein complex subunit 2; L7AE, snoRNP, scaRNP, RNA binding protein; NMR {Saccharomyces cerevisiae} PDB: 2lbx_A
Probab=56.43 E-value=17 Score=28.16 Aligned_cols=49 Identities=14% Similarity=0.285 Sum_probs=29.8
Q ss_pred EEeCCchHHHHHHHhhhcCCCCceEEEEeeCCCCCC-ChhHHHHHHhCCCCeEEeC
Q 024345 134 LASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGP-NSHVIRFLERHGIPYHYLC 188 (269)
Q Consensus 134 ~~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~-~~~v~~~a~~~gIP~~~~~ 188 (269)
+.+|.-..+.+ ++.|+ +.++.+-.|-+... ..++..+|+++|||+++++
T Consensus 21 l~~G~~~v~ka----i~~gk--akLViiA~D~~~~~~~~~l~~lc~~~~VP~~~v~ 70 (121)
T 2lbw_A 21 VKRGVKEVVKA----LRKGE--KGLVVIAGDIWPADVISHIPVLCEDHSVPYIFIP 70 (121)
T ss_dssp EEESHHHHHHH----HHHSC--CCEEEECTTCSCTTHHHHHHHHHHHTCCCEEECC
T ss_pred ccccHHHHHHH----HHcCC--ceEEEEeCCCCHHHHHHHHHHHHHhcCCcEEEEC
Confidence 44454344443 33564 56665555543211 2468899999999999876
No 154
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=56.24 E-value=52 Score=28.38 Aligned_cols=78 Identities=10% Similarity=0.135 Sum_probs=44.3
Q ss_pred eeEEEEEeCCc-hH--HHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCC--C-c---------
Q 024345 129 YKVAVLASKQE-HC--LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKE--N-E--------- 193 (269)
Q Consensus 129 ~riav~~Sg~g-~~--l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~--~-~--------- 193 (269)
|||+++..+.| +. ..+|.+.+++. .++|..+ +..+ . ...+...+.|++++.++... . .
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~~--G~~V~v~-~~~~---~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 79 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMAQ--GWQVRWL-GTAD---R-MEADLVPKHGIEIDFIRISGLRGKGIKALIAAPL 79 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTT--TCEEEEE-ECTT---S-THHHHGGGGTCEEEECCCCCCTTCCHHHHHTCHH
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHHc--CCEEEEE-ecCC---c-chhhhccccCCceEEecCCccCcCccHHHHHHHH
Confidence 89999987765 22 23566655432 3677644 4332 1 12344556799988776321 0 0
Q ss_pred ----hHHHHHHHhc--cCCEEEEEec
Q 024345 194 ----REEELLELVQ--NTDFLVLARY 213 (269)
Q Consensus 194 ----~e~~l~~~l~--~~Dlivla~y 213 (269)
.-..+.+.++ ++|+|++.+.
T Consensus 80 ~~~~~~~~l~~~l~~~~pDvv~~~~~ 105 (364)
T 1f0k_A 80 RIFNAWRQARAIMKAYKPDVVLGMGG 105 (364)
T ss_dssp HHHHHHHHHHHHHHHHCCSEEEECSS
T ss_pred HHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 0123445555 8999999764
No 155
>1p8a_A Protein tyrosine phosphatase; hydrolase; NMR {Tritrichomonas foetus} SCOP: c.44.1.1
Probab=55.86 E-value=24 Score=27.96 Aligned_cols=84 Identities=11% Similarity=0.075 Sum_probs=49.9
Q ss_pred CCeeEEEEEeCCc---hHHHHHHHhhhcCCCCceEEEEeeCC-CCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHh
Q 024345 127 PKYKVAVLASKQE---HCLVDFLYGWQEGKLPVEITCVISNH-DRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELV 202 (269)
Q Consensus 127 ~~~riav~~Sg~g---~~l~~ll~~~~~g~l~~~i~~Visn~-~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l 202 (269)
.++||.|+.+|+- .-.+.++.....+.+.+.=+++-..+ ...++..+.+.++++||++-....+.-. +. .+
T Consensus 3 ~~~~VLFVC~gN~cRSpmAEal~~~~~~~~~~v~SAGt~~~~~g~~~~p~a~~~l~e~Gid~s~~~sr~l~-~~----~~ 77 (146)
T 1p8a_A 3 EKKAVLFVCLGNICRSPACEGICRDMVGDKLIIDSAATSGFHVGQSPDTRSQKVCKSNGVDISKQRARQIT-KA----DF 77 (146)
T ss_dssp CCCCEEEESSSSCSSSTTHHHHHHHHHSSCSSCEEECSCTTSCSCSCTHHHHHHHHHHSCCCCCCCCCCCC-SH----HH
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHHhcCCCEEEEeeecCCcccCCCCCHHHHHHHHHcCCChhcCeeccCC-Hh----Hh
Confidence 4579999999994 45567776654443333323333211 1125677899999999997533222111 11 22
Q ss_pred ccCCEEEEEecce
Q 024345 203 QNTDFLVLARYMQ 215 (269)
Q Consensus 203 ~~~Dlivla~y~~ 215 (269)
+++|+|+...-..
T Consensus 78 ~~~DlIi~m~~~~ 90 (146)
T 1p8a_A 78 SKFDVIAALDQSI 90 (146)
T ss_dssp HSCSEEEESSHHH
T ss_pred hcCCEEEEeChHH
Confidence 3799999986643
No 156
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=55.38 E-value=41 Score=28.74 Aligned_cols=96 Identities=10% Similarity=0.053 Sum_probs=53.8
Q ss_pred CCCeeEEEEEeCCchHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhc--
Q 024345 126 DPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ-- 203 (269)
Q Consensus 126 ~~~~riav~~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~-- 203 (269)
+.+.|+++.|.|+- -++|+..........++++++-+.|+ + -... +.-+|+|++-.+ ++-+.++
T Consensus 82 ~~~~~V~IvGaG~l--G~aLa~~~~~~~~g~~iVg~~D~dp~-~-kiG~--~~i~GvpV~~~~--------dL~~~v~~~ 147 (212)
T 3keo_A 82 HSTTNVMLVGCGNI--GRALLHYRFHDRNKMQISMAFDLDSN-D-LVGK--TTEDGIPVYGIS--------TINDHLIDS 147 (212)
T ss_dssp TSCEEEEEECCSHH--HHHHTTCCCCTTSSEEEEEEEECTTS-T-TTTC--BCTTCCBEEEGG--------GHHHHC-CC
T ss_pred CCCCEEEEECcCHH--HHHHHHhhhcccCCeEEEEEEeCCch-h-ccCc--eeECCeEEeCHH--------HHHHHHHHc
Confidence 45679999999862 22334432122235899999976632 0 1111 113689998532 3556666
Q ss_pred cCCEEEEEecc----eeee--cccccccccccCCCccccCCCC
Q 024345 204 NTDFLVLARYM----QVNR--IRLYVAQLFSCLVTEQLTVLNS 240 (269)
Q Consensus 204 ~~Dlivla~y~----~il~--l~~~~~~~iN~~~~~iHpSLLP 240 (269)
++|.+++|-=. .+.. ++.=-.+++| +-|.-|-
T Consensus 148 ~Id~vIIAvPs~~aq~v~d~lv~~GIk~I~n-----Fap~~l~ 185 (212)
T 3keo_A 148 DIETAILTVPSTEAQEVADILVKAGIKGILS-----FSPVHLT 185 (212)
T ss_dssp SCCEEEECSCGGGHHHHHHHHHHHTCCEEEE-----CSSSCCC
T ss_pred CCCEEEEecCchhHHHHHHHHHHcCCCEEEE-----cCCcccC
Confidence 79999887311 1112 2233357888 7776664
No 157
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=55.34 E-value=14 Score=33.42 Aligned_cols=68 Identities=13% Similarity=0.047 Sum_probs=37.3
Q ss_pred CCeeEEEEEeCC-ch--HHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhc
Q 024345 127 PKYKVAVLASKQ-EH--CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 203 (269)
Q Consensus 127 ~~~riav~~Sg~-g~--~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~ 203 (269)
+++||+|+|.|. +. -+..|.+ .+ .+++++|+... ...+.++|++++.+-.+- + +.++++
T Consensus 4 ~~~rigiIG~G~~g~~~~~~~l~~---~~--~~~l~av~d~~----~~~~~~~a~~~~~~~~~~-----~----~~~ll~ 65 (359)
T 3m2t_A 4 SLIKVGLVGIGAQMQENLLPSLLQ---MQ--DIRIVAACDSD----LERARRVHRFISDIPVLD-----N----VPAMLN 65 (359)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHT---CT--TEEEEEEECSS----HHHHGGGGGTSCSCCEES-----S----HHHHHH
T ss_pred CcceEEEECCCHHHHHHHHHHHHh---CC--CcEEEEEEcCC----HHHHHHHHHhcCCCcccC-----C----HHHHhc
Confidence 468999999998 43 2344322 12 36777665533 234556667765443331 1 223333
Q ss_pred --cCCEEEEEe
Q 024345 204 --NTDFLVLAR 212 (269)
Q Consensus 204 --~~Dlivla~ 212 (269)
++|+++++.
T Consensus 66 ~~~vD~V~i~t 76 (359)
T 3m2t_A 66 QVPLDAVVMAG 76 (359)
T ss_dssp HSCCSEEEECS
T ss_pred CCCCCEEEEcC
Confidence 567777653
No 158
>2l17_A Synarsc, arsenate reductase; alpha/beta sandwich, oxidoreductase; NMR {Synechocystis} PDB: 2l18_A 2l19_A
Probab=55.23 E-value=11 Score=29.72 Aligned_cols=80 Identities=15% Similarity=0.119 Sum_probs=47.3
Q ss_pred CeeEEEEEeCCc---hHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhcc
Q 024345 128 KYKVAVLASKQE---HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQN 204 (269)
Q Consensus 128 ~~riav~~Sg~g---~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~~ 204 (269)
++||.|+-+|+- .-.+.++.+...+. .++.--=+.. ..++..+.+.++++||++...-++. -++ ..++.
T Consensus 4 m~~VLFVC~gN~cRSpmAEa~~~~~~~~~--~~v~SAGt~g-~~~~~~a~~~l~e~Gid~s~~~sr~--l~~---~~~~~ 75 (134)
T 2l17_A 4 MKKVMFVCKRNSCRSQMAEGFAKTLGAGK--IAVTSCGLES-SRVHPTAIAMMEEVGIDISGQTSDP--IEN---FNADD 75 (134)
T ss_dssp CEEEEEECCSSTHHHHHHHHHHHHHSBTT--EEEEEECCTT-SSCCHHHHHHHHTTTCCCSSCCCCC--GGG---CCGGG
T ss_pred CCEEEEEeCCchHHHHHHHHHHHHHcCCC--EEEEcccCCC-CCCCHHHHHHHHHcCCCcccCcccc--CCh---HHhcc
Confidence 569999999995 44566666554332 3443222222 2267789999999999874322221 111 11237
Q ss_pred CCEEEEE-ecce
Q 024345 205 TDFLVLA-RYMQ 215 (269)
Q Consensus 205 ~Dlivla-~y~~ 215 (269)
+|+|+.. .-.+
T Consensus 76 ~DlIi~md~~~~ 87 (134)
T 2l17_A 76 YDVVISLCGCGV 87 (134)
T ss_dssp CSEEEECSCSCS
T ss_pred CCEEEEeCchhh
Confidence 8999998 5543
No 159
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=54.96 E-value=7.8 Score=33.09 Aligned_cols=50 Identities=12% Similarity=0.254 Sum_probs=28.3
Q ss_pred CCeeEEEEEeCC-chHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeE
Q 024345 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYH 185 (269)
Q Consensus 127 ~~~riav~~Sg~-g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~ 185 (269)
+++||+|+|.|. |..+-..+.. .| ++++. +.++ ....+.++++++|+.+.
T Consensus 9 ~~m~i~iiG~G~mG~~~a~~l~~--~g---~~~v~-~~~~---~~~~~~~~~~~~g~~~~ 59 (266)
T 3d1l_A 9 EDTPIVLIGAGNLATNLAKALYR--KG---FRIVQ-VYSR---TEESARELAQKVEAEYT 59 (266)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHH--HT---CCEEE-EECS---SHHHHHHHHHHTTCEEE
T ss_pred CCCeEEEEcCCHHHHHHHHHHHH--CC---CeEEE-EEeC---CHHHHHHHHHHcCCcee
Confidence 357999999987 4444333322 34 45433 3444 23445666777787643
No 160
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=54.82 E-value=12 Score=33.03 Aligned_cols=67 Identities=10% Similarity=0.102 Sum_probs=37.8
Q ss_pred CeeEEEEEeCC-ch--HHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhcc
Q 024345 128 KYKVAVLASKQ-EH--CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQN 204 (269)
Q Consensus 128 ~~riav~~Sg~-g~--~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~~ 204 (269)
++||+|+|.|. |. .+..+.. .+ ..+++ ++++ ......++++++|+|..+.+. ++ .+ -.+
T Consensus 2 ~~~igiIG~G~ig~~~~~~~l~~---~~--~~~l~--v~d~---~~~~~~~~a~~~g~~~~~~~~-----~~-~l--~~~ 63 (323)
T 1xea_A 2 SLKIAMIGLGDIAQKAYLPVLAQ---WP--DIELV--LCTR---NPKVLGTLATRYRVSATCTDY-----RD-VL--QYG 63 (323)
T ss_dssp CEEEEEECCCHHHHHTHHHHHTT---ST--TEEEE--EECS---CHHHHHHHHHHTTCCCCCSST-----TG-GG--GGC
T ss_pred CcEEEEECCCHHHHHHHHHHHHh---CC--CceEE--EEeC---CHHHHHHHHHHcCCCccccCH-----HH-Hh--hcC
Confidence 47999999986 33 2233322 12 25666 5655 234567889999998522221 11 11 126
Q ss_pred CCEEEEEe
Q 024345 205 TDFLVLAR 212 (269)
Q Consensus 205 ~Dlivla~ 212 (269)
+|+|+++-
T Consensus 64 ~D~V~i~t 71 (323)
T 1xea_A 64 VDAVMIHA 71 (323)
T ss_dssp CSEEEECS
T ss_pred CCEEEEEC
Confidence 77777764
No 161
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=54.76 E-value=24 Score=32.41 Aligned_cols=74 Identities=9% Similarity=0.196 Sum_probs=41.6
Q ss_pred CCeeEEEEEeCCchHHHHHHHhhh-cCCCCceEEEEeeCCCCC-CChhHH----HHHHhCCCCeEEeCCCCCchHHHHHH
Q 024345 127 PKYKVAVLASKQEHCLVDFLYGWQ-EGKLPVEITCVISNHDRG-PNSHVI----RFLERHGIPYHYLCAKENEREEELLE 200 (269)
Q Consensus 127 ~~~riav~~Sg~g~~l~~ll~~~~-~g~l~~~i~~Visn~~~~-~~~~v~----~~a~~~gIP~~~~~~~~~~~e~~l~~ 200 (269)
...||+++|-+.......++..+. -| .++. ++.|+.. |+..+. +.|++.|..+.... ++.+
T Consensus 154 ~gl~ia~vGD~~~~va~Sl~~~~~~~G---~~v~--~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~--------d~~e 220 (333)
T 1duv_G 154 NEMTLVYAGDARNNMGNSMLEAAALTG---LDLR--LVAPQACWPEAALVTECRALAQQNGGNITLTE--------DVAK 220 (333)
T ss_dssp GGCEEEEESCTTSHHHHHHHHHHHHHC---CEEE--EECCGGGCCCHHHHHHHHHHHHHTTCEEEEES--------CHHH
T ss_pred CCcEEEEECCCccchHHHHHHHHHHcC---CEEE--EECCcccCCCHHHHHHHHHHHHHcCCeEEEEE--------CHHH
Confidence 347899988873333333333321 23 4543 4444321 333343 45558897776643 2335
Q ss_pred HhccCCEEEEEec
Q 024345 201 LVQNTDFLVLARY 213 (269)
Q Consensus 201 ~l~~~Dlivla~y 213 (269)
.++++|+|.+-.|
T Consensus 221 av~~aDvvytd~w 233 (333)
T 1duv_G 221 GVEGADFIYTDVW 233 (333)
T ss_dssp HHTTCSEEEECCS
T ss_pred HhCCCCEEEeCCc
Confidence 6679999999777
No 162
>2wmy_A WZB, putative acid phosphatase WZB; hydrolase; 2.21A {Escherichia coli}
Probab=54.16 E-value=39 Score=26.83 Aligned_cols=80 Identities=14% Similarity=0.116 Sum_probs=47.4
Q ss_pred CeeEEEEEeCCc---hHHHHHHHhhhcCCCCceEEEEee-CCC-CCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHh
Q 024345 128 KYKVAVLASKQE---HCLVDFLYGWQEGKLPVEITCVIS-NHD-RGPNSHVIRFLERHGIPYHYLCAKENEREEELLELV 202 (269)
Q Consensus 128 ~~riav~~Sg~g---~~l~~ll~~~~~g~l~~~i~~Vis-n~~-~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l 202 (269)
++||.|+.+|+- .-.+.++.....+ .++.--=+ .++ ..++..+.+.++++||++...-++. -+++ .+
T Consensus 8 m~~VLFVC~gN~cRSpmAEal~r~~~~~---~~v~SAGt~~~~g~~~~p~a~~~l~e~Gid~~~~~ar~--l~~~---~~ 79 (150)
T 2wmy_A 8 FDSILVICTGNICRSPIGERLLRRLLPS---KKINSAGVGALVDHTADESAIRVAEKNGLCLKGHRGTK--FTSA---LA 79 (150)
T ss_dssp CCEEEEEESSSSSHHHHHHHHHHHHCTT---SEEEEEETTCCTTCCCCHHHHHHHHHTTCCCTTCCCCB--CCHH---HH
T ss_pred cCEEEEEcCCchHHHHHHHHHHHHhcCC---CEEEeccccCCCCCCCCHHHHHHHHHcCCCccCCcccC--CCHH---Hh
Confidence 459999999995 4446666654322 44433222 121 2256779999999999874322221 1111 23
Q ss_pred ccCCEEEEEecce
Q 024345 203 QNTDFLVLARYMQ 215 (269)
Q Consensus 203 ~~~Dlivla~y~~ 215 (269)
+.+|+|+...-..
T Consensus 80 ~~~DlIi~m~~~~ 92 (150)
T 2wmy_A 80 RQYDLLLVMEYSH 92 (150)
T ss_dssp TTCSEEEESCHHH
T ss_pred ccCCEEEEcCHHH
Confidence 4799999986653
No 163
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=54.13 E-value=28 Score=26.93 Aligned_cols=73 Identities=8% Similarity=-0.026 Sum_probs=37.7
Q ss_pred CeeEEEEEeCC-chHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHH--HhCCCCeEEeCCCCCchHHHHHHH-hc
Q 024345 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFL--ERHGIPYHYLCAKENEREEELLEL-VQ 203 (269)
Q Consensus 128 ~~riav~~Sg~-g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a--~~~gIP~~~~~~~~~~~e~~l~~~-l~ 203 (269)
+.+|.|+|.|. |..+-..|.. .| ++++.+-.+. ......+. ...|+++..-+.. .++.+.+. ++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~--~g---~~V~vid~~~----~~~~~~~~~~~~~~~~~i~gd~~---~~~~l~~a~i~ 70 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQ--RG---QNVTVISNLP----EDDIKQLEQRLGDNADVIPGDSN---DSSVLKKAGID 70 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHH--TT---CCEEEEECCC----HHHHHHHHHHHCTTCEEEESCTT---SHHHHHHHTTT
T ss_pred CCcEEEECCCHHHHHHHHHHHH--CC---CCEEEEECCC----hHHHHHHHHhhcCCCeEEEcCCC---CHHHHHHcChh
Confidence 46899998766 3444333332 34 4565443322 11122222 3458888775521 12333333 45
Q ss_pred cCCEEEEEe
Q 024345 204 NTDFLVLAR 212 (269)
Q Consensus 204 ~~Dlivla~ 212 (269)
++|++|++-
T Consensus 71 ~ad~vi~~~ 79 (153)
T 1id1_A 71 RCRAILALS 79 (153)
T ss_dssp TCSEEEECS
T ss_pred hCCEEEEec
Confidence 899988863
No 164
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=54.08 E-value=61 Score=30.07 Aligned_cols=95 Identities=18% Similarity=0.240 Sum_probs=51.3
Q ss_pred CCHHHHHHHHHhhhhhhccceeeeeecCCCCCeeEEEEEeCCchHHHHHHHhhhcCCCCceEEEEeeCCCCC-CChhHH-
Q 024345 97 WPREQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRG-PNSHVI- 174 (269)
Q Consensus 97 ~~~~~L~e~L~~la~el~l~~~~~~~~~~~~~~riav~~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~-~~~~v~- 174 (269)
..+.+.-.+|..+-+.+|- -...||+++|-+.......++..+.. ++.++. ++.|+.. |+..+.
T Consensus 155 ~HPtQaLaDl~Ti~E~~g~----------l~gl~va~vGD~~~rva~Sl~~~~~~--lG~~v~--~~~P~~l~p~~~~~~ 220 (359)
T 2w37_A 155 WHPTQMLADFMTVKENFGK----------LQGLTLTFMGDGRNNVANSLLVTGAI--LGVNIH--IVAPKALFPTEETQN 220 (359)
T ss_dssp CCHHHHHHHHHHHHHHHSC----------CTTCEEEEESCTTSHHHHHHHHHHHH--HTCEEE--EECCGGGSCCHHHHH
T ss_pred CCccHHHHHHHHHHHHhCC----------cCCeEEEEECCCccchHHHHHHHHHH--cCCEEE--EECCccccCCHHHHH
Confidence 3455555555555555541 14478999888733333333333211 224543 4444321 333344
Q ss_pred ---HHHHhCCCCeEEeCCCCCchHHHHHHHhccCCEEEEEec
Q 024345 175 ---RFLERHGIPYHYLCAKENEREEELLELVQNTDFLVLARY 213 (269)
Q Consensus 175 ---~~a~~~gIP~~~~~~~~~~~e~~l~~~l~~~Dlivla~y 213 (269)
+.|++.|..+.... .+.+.++++|+|.+-.|
T Consensus 221 ~~~~~a~~~G~~v~~~~--------d~~eav~~aDvvytd~w 254 (359)
T 2w37_A 221 IAKGFAEKSGAKLVITD--------DLDEGLKGSNVVYTDVW 254 (359)
T ss_dssp HHHHHHHHHTCCEEEES--------CHHHHHTTCSEEEECCS
T ss_pred HHHHHHHHcCCeEEEEe--------CHHHHhcCCCEEEEccc
Confidence 44558887776643 23356679999999777
No 165
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=53.83 E-value=29 Score=31.16 Aligned_cols=47 Identities=26% Similarity=0.325 Sum_probs=27.3
Q ss_pred CeeEEEEEeCC-chHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCe
Q 024345 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPY 184 (269)
Q Consensus 128 ~~riav~~Sg~-g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~ 184 (269)
.+||+|+|.|. |+.+-..+.. .| .+|. +.++. .....+.+++.|+.+
T Consensus 16 ~~~I~IIG~G~mG~alA~~L~~--~G---~~V~--~~~~~---~~~~~~~a~~~G~~~ 63 (338)
T 1np3_A 16 GKKVAIIGYGSQGHAHACNLKD--SG---VDVT--VGLRS---GSATVAKAEAHGLKV 63 (338)
T ss_dssp TSCEEEECCSHHHHHHHHHHHH--TT---CCEE--EECCT---TCHHHHHHHHTTCEE
T ss_pred CCEEEEECchHHHHHHHHHHHH--Cc---CEEE--EEECC---hHHHHHHHHHCCCEE
Confidence 36899999988 5544333332 34 3543 45542 233467778888743
No 166
>1u2p_A Ptpase, low molecular weight protein-tyrosine- phosphatase; hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 1u2q_A
Probab=53.07 E-value=49 Score=26.55 Aligned_cols=81 Identities=19% Similarity=0.182 Sum_probs=46.4
Q ss_pred CCeeEEEEEeCCc---hHHHHHHHhhh-cCCCC--ceEEEE-eeC-C-CCCCChhHHHHHHhCCCCeEEeCCCCCchHHH
Q 024345 127 PKYKVAVLASKQE---HCLVDFLYGWQ-EGKLP--VEITCV-ISN-H-DRGPNSHVIRFLERHGIPYHYLCAKENEREEE 197 (269)
Q Consensus 127 ~~~riav~~Sg~g---~~l~~ll~~~~-~g~l~--~~i~~V-isn-~-~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~ 197 (269)
+++||.|+.+|+- .-.+.++...- +..+. .++.-- +.. + ...++..+++.++++||++- .-.+.-. +
T Consensus 3 ~~~~VLFVC~gN~cRSpmAEal~~~~~~~~gl~~~~~v~SAGt~~~~~G~~~~p~a~~~l~~~Gid~s-~~ar~l~-~-- 78 (163)
T 1u2p_A 3 DPLHVTFVCTGNICRSPMAEKMFAQQLRHRGLGDAVRVTSAGTGNWHVGSCADERAAGVLRAHGYPTD-HRAAQVG-T-- 78 (163)
T ss_dssp -CEEEEEEESSSSSHHHHHHHHHHHHHHHTTCTTTEEEEEEESSCTTTTCCCCHHHHHHHHHTTCCCC-CCCCBCC-H--
T ss_pred CCCEEEEEcCCcHhHHHHHHHHHHHHHHHCCCCCcEEEEecccCCCcCCCCCCHHHHHHHHHcCcCCC-ceeeECC-h--
Confidence 4689999999995 34455555431 11122 344332 222 1 11266789999999999986 3322111 1
Q ss_pred HHHHhccCCEEEEEecc
Q 024345 198 LLELVQNTDFLVLARYM 214 (269)
Q Consensus 198 l~~~l~~~Dlivla~y~ 214 (269)
+.+++ |+|+...-.
T Consensus 79 --~~~~~-DlIi~Md~~ 92 (163)
T 1u2p_A 79 --EHLAA-DLLVALDRN 92 (163)
T ss_dssp --HHHTS-SEEEESSHH
T ss_pred --hhccC-CEEEEeCHH
Confidence 12348 999998544
No 167
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=52.35 E-value=28 Score=30.75 Aligned_cols=33 Identities=6% Similarity=-0.126 Sum_probs=19.9
Q ss_pred CCeeEEEEEeC-C-ch-HHHHHHHhhhcCCCCceEEEEeeCC
Q 024345 127 PKYKVAVLASK-Q-EH-CLVDFLYGWQEGKLPVEITCVISNH 165 (269)
Q Consensus 127 ~~~riav~~Sg-~-g~-~l~~ll~~~~~g~l~~~i~~Visn~ 165 (269)
+|+||+++|.| . +. -+.++.+ . +.++++|+...
T Consensus 2 ~mirvgiIG~gG~i~~~h~~~l~~----~--~~~lvav~d~~ 37 (312)
T 3o9z_A 2 HMTRFALTGLAGYIAPRHLKAIKE----V--GGVLVASLDPA 37 (312)
T ss_dssp -CCEEEEECTTSSSHHHHHHHHHH----T--TCEEEEEECSS
T ss_pred CceEEEEECCChHHHHHHHHHHHh----C--CCEEEEEEcCC
Confidence 57899999994 3 33 3333332 2 36888876544
No 168
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=52.29 E-value=37 Score=29.74 Aligned_cols=52 Identities=8% Similarity=0.020 Sum_probs=32.5
Q ss_pred CeeEEEEEeCC-ch--HHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeC
Q 024345 128 KYKVAVLASKQ-EH--CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (269)
Q Consensus 128 ~~riav~~Sg~-g~--~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~ 188 (269)
|+||.++..+. || -+..|.+..++- .++|.. ++.. ...+..++.|++++.++
T Consensus 4 M~~il~~~~~~~Ghv~~~~~La~~L~~~--GheV~v-~~~~------~~~~~~~~~G~~~~~~~ 58 (402)
T 3ia7_A 4 QRHILFANVQGHGHVYPSLGLVSELARR--GHRITY-VTTP------LFADEVKAAGAEVVLYK 58 (402)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHHHT--TCEEEE-EECH------HHHHHHHHTTCEEEECC
T ss_pred CCEEEEEeCCCCcccccHHHHHHHHHhC--CCEEEE-EcCH------HHHHHHHHcCCEEEecc
Confidence 45999888775 43 333444444332 267764 4432 25677789999999876
No 169
>3jvi_A Protein tyrosine phosphatase; niaid, ssgcid, seattle structural genomics center for infect disease, parasitic protozoan, dysentery; 1.80A {Entamoeba histolytica} PDB: 3js5_A* 3ily_A 3ido_A*
Probab=51.96 E-value=41 Score=27.17 Aligned_cols=83 Identities=7% Similarity=-0.025 Sum_probs=45.7
Q ss_pred CCeeEEEEEeCCc---hHHHHHHHhhh--cCCC-CceEEE-EeeC-C-CCCCChhHHHHHHhCCCCeEEeCCCCCchHHH
Q 024345 127 PKYKVAVLASKQE---HCLVDFLYGWQ--EGKL-PVEITC-VISN-H-DRGPNSHVIRFLERHGIPYHYLCAKENEREEE 197 (269)
Q Consensus 127 ~~~riav~~Sg~g---~~l~~ll~~~~--~g~l-~~~i~~-Visn-~-~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~ 197 (269)
+|+||.|..+|+- .-.+.++...- .|.- ..++.- -+.. + ...++..+.+.++++||++ ...++.- +++
T Consensus 3 ~m~~vLFVC~gN~cRSpmAE~~~~~~~~~~gl~~~~~v~SAGt~~~~~G~~~~~~a~~~l~~~Gid~-~~~ar~l--~~~ 79 (161)
T 3jvi_A 3 GSMKLLFVCLGNICRSPAAEAVMKKVIQNHHLTEKYICDSAGTCSYHEGQQADSRMRKVGKSRGYQV-DSISRPV--VSS 79 (161)
T ss_dssp -CEEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEESCCTTTTCBCCHHHHHHHHHTTCCC-CCBCCBC--CHH
T ss_pred CCcEEEEECCCchhHHHHHHHHHHHHHHHcCCCCcEEEEeeecCCcccCCCCCHHHHHHHHHcCcCC-CCeeeEC--CHH
Confidence 4689999999995 34455554432 2210 234422 2222 1 1125677999999999998 3222211 111
Q ss_pred HHHHhccCCEEEEEecce
Q 024345 198 LLELVQNTDFLVLARYMQ 215 (269)
Q Consensus 198 l~~~l~~~Dlivla~y~~ 215 (269)
.++.+|+|+...-..
T Consensus 80 ---~~~~~DlIl~Md~~~ 94 (161)
T 3jvi_A 80 ---DFKNFDYIFAMDNDN 94 (161)
T ss_dssp ---HHHHCSEEEESSHHH
T ss_pred ---HhcCCCEEEEeChHH
Confidence 223689999976543
No 170
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Probab=51.93 E-value=16 Score=35.48 Aligned_cols=83 Identities=12% Similarity=0.154 Sum_probs=50.3
Q ss_pred eEEEEEEc---CCCcChHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCC-CHHHHHHHHHhhhhhhcc-c
Q 024345 42 HGIHVFHC---PDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKW-PREQMDEDFFKLSKMFNA-M 116 (269)
Q Consensus 42 ~~iItV~G---~DrpGIVa~VS~~La~~giNI~dl~~~~~~~~g~F~m~~~v~~p~~~~-~~~~L~e~L~~la~el~l-~ 116 (269)
-..|++.| .++||+.++|-+.|+++|+||.-+.+. ...+.+.+ +..+. ..+.+.+.|+++.++++. .
T Consensus 341 ~~~I~i~~~~m~~~~g~~~~if~~la~~~I~vd~I~ss------e~sis~~v--~~~~~~~~~~~~~~l~~~~~el~~~~ 412 (510)
T 2cdq_A 341 VTMLDIASTRMLGQVGFLAKVFSIFEELGISVDVVATS------EVSISLTL--DPSKLWSRELIQQELDHVVEELEKIA 412 (510)
T ss_dssp EEEEEEECGGGTTCTTHHHHHHHHHHHTTCCEEEEEEE------TTEEEEEE--CCGGGSSSCCCHHHHHHHHHHHTTTS
T ss_pred eEEEEEEcCCCCCcccHHHHHHHHHHHcCCcEEEEEeC------CCeEEEEE--echHhhhhhHHHHHHHHHHHHhCCCC
Confidence 35678887 689999999999999999999999763 22333333 32111 111123455555555543 1
Q ss_pred eeeeeecCCCCCeeEEEEEe
Q 024345 117 RSVVRVPDIDPKYKVAVLAS 136 (269)
Q Consensus 117 ~~~~~~~~~~~~~riav~~S 136 (269)
...+ ....-+|++.|.
T Consensus 413 ~v~~----~~~~a~VsiVG~ 428 (510)
T 2cdq_A 413 VVNL----LKGRAIISLIGN 428 (510)
T ss_dssp EEEE----EEEEEEEEEEEC
T ss_pred eEEE----eCCcEEEEEEEE
Confidence 1111 224467888888
No 171
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=51.87 E-value=16 Score=34.70 Aligned_cols=71 Identities=21% Similarity=0.258 Sum_probs=43.5
Q ss_pred CCeeEEEEEeCC-chHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhc--
Q 024345 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ-- 203 (269)
Q Consensus 127 ~~~riav~~Sg~-g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~-- 203 (269)
..|||.|+|.|+ |..+-..|.. +| ++++.|=.|+ ..+.++++++++++.+-+.. +.++++...
T Consensus 2 ~~M~iiI~G~G~vG~~la~~L~~--~~---~~v~vId~d~-----~~~~~~~~~~~~~~i~Gd~~----~~~~L~~Agi~ 67 (461)
T 4g65_A 2 NAMKIIILGAGQVGGTLAENLVG--EN---NDITIVDKDG-----DRLRELQDKYDLRVVNGHAS----HPDVLHEAGAQ 67 (461)
T ss_dssp CCEEEEEECCSHHHHHHHHHTCS--TT---EEEEEEESCH-----HHHHHHHHHSSCEEEESCTT----CHHHHHHHTTT
T ss_pred CcCEEEEECCCHHHHHHHHHHHH--CC---CCEEEEECCH-----HHHHHHHHhcCcEEEEEcCC----CHHHHHhcCCC
Confidence 358999999998 5666554432 33 5665432222 23566677899998875532 234444433
Q ss_pred cCCEEEEE
Q 024345 204 NTDFLVLA 211 (269)
Q Consensus 204 ~~Dlivla 211 (269)
++|+++.+
T Consensus 68 ~ad~~ia~ 75 (461)
T 4g65_A 68 DADMLVAV 75 (461)
T ss_dssp TCSEEEEC
T ss_pred cCCEEEEE
Confidence 78987764
No 172
>2fhm_A Probable acylphosphatase; hydrolase; NMR {Bacillus subtilis} PDB: 2hlt_A 2hlu_A 3br8_A
Probab=51.84 E-value=51 Score=24.08 Aligned_cols=58 Identities=17% Similarity=0.066 Sum_probs=43.6
Q ss_pred HHHHHHHhhhhhhccceeeeeecCCCCCeeEEEEEeCCchHHHHHHHhhhcCCCCceEEEEe
Q 024345 101 QMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVI 162 (269)
Q Consensus 101 ~L~e~L~~la~el~l~~~~~~~~~~~~~~riav~~Sg~g~~l~~ll~~~~~g~l~~~i~~Vi 162 (269)
-+|--...+|.++++.=|+... .+. +|-+.+.|+...+.++++.++.|.-++.|.-|-
T Consensus 16 GFR~~v~~~A~~lgl~G~V~N~--~dG--~Vei~~eG~~~~i~~f~~~l~~~~p~a~V~~v~ 73 (91)
T 2fhm_A 16 GFRYFVQMEADKRKLAGWVKNR--DDG--RVEILAEGPENALQSFVEAVKNGSPFSKVTDIS 73 (91)
T ss_dssp CHHHHHHHHHHHTTCEEEEEEC--TTS--CEEEEEEECHHHHHHHHHHHHTTCSSSEEEEEE
T ss_pred CHHHHHHHHHHHcCCeEEEEEC--CCC--cEEEEEEeCHHHHHHHHHHHHhCCCccEEEEEE
Confidence 3778888899999997765432 223 788888888888999999988886557776663
No 173
>2y1e_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase, DOXP/MEP pathway; 1.65A {Mycobacterium tuberculosis} PDB: 2jcv_A* 2jcz_A* 2jd2_A 2jd1_A 2y1d_A* 2y1c_A 2y1f_A* 2y1g_A* 3ras_A* 4a03_A* 4aic_A* 2jcx_A* 2jcy_A 2jd0_A* 2c82_A
Probab=51.63 E-value=35 Score=32.20 Aligned_cols=80 Identities=15% Similarity=0.206 Sum_probs=49.3
Q ss_pred CCCeeEEEEEeCC--chHHHHHHHhhhcCCCCceEEEEee-CCCCCCChhHHHHHHhCCCCeEEeCCCCC---------c
Q 024345 126 DPKYKVAVLASKQ--EHCLVDFLYGWQEGKLPVEITCVIS-NHDRGPNSHVIRFLERHGIPYHYLCAKEN---------E 193 (269)
Q Consensus 126 ~~~~riav~~Sg~--g~~l~~ll~~~~~g~l~~~i~~Vis-n~~~~~~~~v~~~a~~~gIP~~~~~~~~~---------~ 193 (269)
..++||++|||.. |.+-.+++.+ ..-.++|+++.. ++ .-....+-|++++-.+..+..... .
T Consensus 19 ~~mk~i~ILGSTGSIGtqtLdVi~~---~pd~f~V~aLaa~g~---nv~~L~~q~~~f~p~~v~v~d~~~~~~~~~~v~~ 92 (398)
T 2y1e_A 19 DGRLRVVVLGSTGSIGTQALQVIAD---NPDRFEVVGLAAGGA---HLDTLLRQRAQTGVTNIAVADEHAAQRVGDIPYH 92 (398)
T ss_dssp -CCEEEEEESTTSHHHHHHHHHHHH---CTTTEEEEEEEECSS---CHHHHHHHHHHHCCCCEEESCHHHHHHHCCCSEE
T ss_pred CCceEEEEEccCcHHHHHHHHHHHh---CCCceEEEEEEecCC---CHHHHHHHHHHcCCCEEEEcCHHHhhhcCCEEEe
Confidence 4568999999987 4444456654 222489999888 54 224577888899877776642100 0
Q ss_pred hHHHHHHHhc--cCCEEEEE
Q 024345 194 REEELLELVQ--NTDFLVLA 211 (269)
Q Consensus 194 ~e~~l~~~l~--~~Dlivla 211 (269)
-++.+.++.. ++|+++.|
T Consensus 93 G~~~l~~~a~~~~~D~Vv~A 112 (398)
T 2y1e_A 93 GSDAATRLVEQTEADVVLNA 112 (398)
T ss_dssp STTHHHHHHHHSCCSEEEEC
T ss_pred cHHHHHHHhcCCCCCEEEEe
Confidence 1234555554 58887765
No 174
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=51.39 E-value=50 Score=30.30 Aligned_cols=96 Identities=17% Similarity=0.204 Sum_probs=50.6
Q ss_pred CCHHHHHHHHHhhhhhhccceeeeeecCCCCCeeEEEEEeCCchHHHHHHHhhhcCCCCceEEEEeeCCCCC-CChhHH-
Q 024345 97 WPREQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRG-PNSHVI- 174 (269)
Q Consensus 97 ~~~~~L~e~L~~la~el~l~~~~~~~~~~~~~~riav~~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~-~~~~v~- 174 (269)
..+.+.-.+|..+-+.+|- .-...||+++|-+.......++..+.. ++.++. ++.|+.. |+..+.
T Consensus 133 ~HPtQ~LaDl~Ti~e~~g~---------~l~gl~va~vGD~~~~va~Sl~~~~~~--~G~~v~--~~~P~~~~p~~~~~~ 199 (335)
T 1dxh_A 133 YHPTQMLADVLTMREHSDK---------PLHDISYAYLGDARNNMGNSLLLIGAK--LGMDVR--IAAPKALWPHDEFVA 199 (335)
T ss_dssp CCHHHHHHHHHHHHHTCSS---------CGGGCEEEEESCCSSHHHHHHHHHHHH--TTCEEE--EECCGGGSCCHHHHH
T ss_pred CCcHHHHHHHHHHHHHcCC---------CcCCeEEEEecCCccchHHHHHHHHHH--cCCEEE--EECCcccCCCHHHHH
Confidence 3455544455555444440 113478999888733333333333211 234543 4444321 333344
Q ss_pred ---HHHHhCCCCeEEeCCCCCchHHHHHHHhccCCEEEEEec
Q 024345 175 ---RFLERHGIPYHYLCAKENEREEELLELVQNTDFLVLARY 213 (269)
Q Consensus 175 ---~~a~~~gIP~~~~~~~~~~~e~~l~~~l~~~Dlivla~y 213 (269)
+.|++.|..+.... ++.+.++++|+|.+-.|
T Consensus 200 ~~~~~a~~~G~~v~~~~--------d~~eav~~aDvvytd~w 233 (335)
T 1dxh_A 200 QCKKFAEESGAKLTLTE--------DPKEAVKGVDFVHTDVW 233 (335)
T ss_dssp HHHHHHHHHTCEEEEES--------CHHHHTTTCSEEEECCC
T ss_pred HHHHHHHHcCCeEEEEe--------CHHHHhCCCCEEEeCCc
Confidence 44558887766543 23456679999999777
No 175
>3a2k_A TRNA(Ile)-lysidine synthase; ligase, pseudo-knot, ligase/RNA complex; 3.65A {Geobacillus kaustophilus}
Probab=51.31 E-value=21 Score=33.83 Aligned_cols=61 Identities=15% Similarity=0.090 Sum_probs=41.6
Q ss_pred CCeeEEEEEeCCc--hHHHHHHHhhhcCCCCceEEEEeeCCCCC-CC-----hhHHHHHHhCCCCeEEeC
Q 024345 127 PKYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRG-PN-----SHVIRFLERHGIPYHYLC 188 (269)
Q Consensus 127 ~~~riav~~Sg~g--~~l~~ll~~~~~g~l~~~i~~Visn~~~~-~~-----~~v~~~a~~~gIP~~~~~ 188 (269)
+..||+|..||.. ..|..++..++.. .+.++.++-.|+.-. +. ..+.++|+++|||+++++
T Consensus 17 ~~~~vlVa~SGG~DS~~Ll~ll~~~~~~-~~~~v~avhvdhglrg~~s~~~~~~v~~~~~~lgi~~~v~~ 85 (464)
T 3a2k_A 17 EGAAVIVGVSGGPDSLALLHVFLSLRDE-WKLQVIAAHVDHMFRGRESEEEMEFVKRFCVERRILCETAQ 85 (464)
T ss_dssp CSSBEEEECCSSHHHHHHHHHHHHHHHT-TTCBCEEEEEECTTCTHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEEEcCcHHHHHHHHHHHHHHHH-cCCeEEEEEEECCCCccccHHHHHHHHHHHHHcCCcEEEEE
Confidence 3468999999974 4565666544321 246788887776321 11 258899999999999876
No 176
>2fek_A Low molecular weight protein-tyrosine- phosphatase WZB; phosphate binding, hydrolase; NMR {Escherichia coli K12}
Probab=50.93 E-value=39 Score=27.59 Aligned_cols=80 Identities=13% Similarity=0.178 Sum_probs=47.1
Q ss_pred CCeeEEEEEeCCc---hHHHHHHHhhhcCCCCceEEEEee--CCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHH
Q 024345 127 PKYKVAVLASKQE---HCLVDFLYGWQEGKLPVEITCVIS--NHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLEL 201 (269)
Q Consensus 127 ~~~riav~~Sg~g---~~l~~ll~~~~~g~l~~~i~~Vis--n~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~ 201 (269)
.++||.|+.+|+- .-.+.+++..-.+ .++.--=+ .....++..+.+.++++||++-..-++. -+++ .
T Consensus 21 mm~~VLFVCtgN~cRSpmAEal~r~~~~~---~~v~SAGt~~~~g~~~~p~a~~vl~e~Gid~s~~~sr~--l~~~---~ 92 (167)
T 2fek_A 21 MFNNILVVCVGNICRSPTAERLLQRYHPE---LKVESAGLGALVGKGADPTAISVAAEHQLSLEGHCARQ--ISRR---L 92 (167)
T ss_dssp CCCEEEEEESSSSSHHHHHHHHHHHHCTT---CEEEEEETTCCTTCCCCHHHHHHHHHTTCCCTTCCCCB--CCHH---H
T ss_pred ccCeEEEEcCCcHHHHHHHHHHHHHhcCC---eEEEeeecCCCCCCCCCHHHHHHHHHcCCCccCCcCcc--CCHH---H
Confidence 3469999999995 4456666654322 44432222 1112256779999999999874322221 1111 1
Q ss_pred hccCCEEEEEecc
Q 024345 202 VQNTDFLVLARYM 214 (269)
Q Consensus 202 l~~~Dlivla~y~ 214 (269)
++++|+|+...-.
T Consensus 93 ~~~~DlIitM~~~ 105 (167)
T 2fek_A 93 CRNYDLILTMEKR 105 (167)
T ss_dssp HHHSSEEEESCHH
T ss_pred hccCCEEEEcCHH
Confidence 2368999998664
No 177
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=50.86 E-value=15 Score=32.39 Aligned_cols=67 Identities=16% Similarity=0.158 Sum_probs=35.9
Q ss_pred CCCCeeEEEEEeCC-chHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhc
Q 024345 125 IDPKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 203 (269)
Q Consensus 125 ~~~~~riav~~Sg~-g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~ 203 (269)
...++||+|+|.|. |..+-..+.. .| ++|. +.|++ ...+.+ +.+.|+.+. . + ..+.++
T Consensus 18 ~~~m~~I~iIG~G~mG~~~A~~l~~--~G---~~V~--~~dr~---~~~~~~-l~~~g~~~~--~----~----~~~~~~ 76 (310)
T 3doj_A 18 GSHMMEVGFLGLGIMGKAMSMNLLK--NG---FKVT--VWNRT---LSKCDE-LVEHGASVC--E----S----PAEVIK 76 (310)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHH--TT---CEEE--EECSS---GGGGHH-HHHTTCEEC--S----S----HHHHHH
T ss_pred cccCCEEEEECccHHHHHHHHHHHH--CC---CeEE--EEeCC---HHHHHH-HHHCCCeEc--C----C----HHHHHH
Confidence 45668999999998 5544333322 35 4544 45652 223333 345665321 1 1 223344
Q ss_pred cCCEEEEEe
Q 024345 204 NTDFLVLAR 212 (269)
Q Consensus 204 ~~Dlivla~ 212 (269)
++|+|+++-
T Consensus 77 ~aDvvi~~v 85 (310)
T 3doj_A 77 KCKYTIAML 85 (310)
T ss_dssp HCSEEEECC
T ss_pred hCCEEEEEc
Confidence 688888764
No 178
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus}
Probab=50.79 E-value=1.1e+02 Score=25.77 Aligned_cols=106 Identities=8% Similarity=-0.015 Sum_probs=57.0
Q ss_pred HhhhhhhccceeeeeecC--CCCCeeEEEEEeCCchHHHHH---HHhhhcCCCCceEEEEeeCCCCCCC---hhHHHHHH
Q 024345 107 FKLSKMFNAMRSVVRVPD--IDPKYKVAVLASKQEHCLVDF---LYGWQEGKLPVEITCVISNHDRGPN---SHVIRFLE 178 (269)
Q Consensus 107 ~~la~el~l~~~~~~~~~--~~~~~riav~~Sg~g~~l~~l---l~~~~~g~l~~~i~~Visn~~~~~~---~~v~~~a~ 178 (269)
+.+........+..+... ..+..||.+...++....+++ ++..+.. +.++.++-...+.... ..+.++++
T Consensus 147 ~~vl~~~~~PVlvv~~~~~~~~~~~~Ilv~~d~s~~s~~al~~a~~la~~~--~~~l~ll~v~~~~~~~~~l~~~~~~l~ 224 (294)
T 3loq_A 147 EGVLHDSKVPVYIFKHDMVVNSLFDRVLVAYDFSKWADRALEYAKFVVKKT--GGELHIIHVSEDGDKTADLRVMEEVIG 224 (294)
T ss_dssp HHHHHHCSSCEEEECCCTTTTCTTSEEEEECCSSHHHHHHHHHHHHHHHHH--TCEEEEEEECSSSCCHHHHHHHHHHHH
T ss_pred HHHHhcCCCCEEEecCccccCccCCEEEEEECCCHHHHHHHHHHHHHhhhc--CCEEEEEEEccCchHHHHHHHHHHHHH
Confidence 344444443333333322 145578888887775433333 2221111 2455554333321011 24567788
Q ss_pred hCCCCeEEeCCCCCchHHHHHHHhc--cCCEEEEEecce
Q 024345 179 RHGIPYHYLCAKENEREEELLELVQ--NTDFLVLARYMQ 215 (269)
Q Consensus 179 ~~gIP~~~~~~~~~~~e~~l~~~l~--~~Dlivla~y~~ 215 (269)
++|+++...-.. ....+++.+..+ ++|+||+..+++
T Consensus 225 ~~~~~~~~~~~~-g~~~~~I~~~a~~~~~dLlV~G~~~~ 262 (294)
T 3loq_A 225 AEGIEVHVHIES-GTPHKAILAKREEINATTIFMGSRGA 262 (294)
T ss_dssp HTTCCEEEEEEC-SCHHHHHHHHHHHTTCSEEEEECCCC
T ss_pred HcCCcEEEEEec-CCHHHHHHHHHHhcCcCEEEEeCCCC
Confidence 899996653322 234567777776 899999998865
No 179
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=50.70 E-value=23 Score=30.07 Aligned_cols=37 Identities=11% Similarity=0.105 Sum_probs=23.9
Q ss_pred CCCeeEEEEEeCC-chHHHHHHHhhhcCCCCceEEEEeeCCC
Q 024345 126 DPKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHD 166 (269)
Q Consensus 126 ~~~~riav~~Sg~-g~~l~~ll~~~~~g~l~~~i~~Visn~~ 166 (269)
+.++|+++.|.|. |..+ ++...... .+++++++.+.+
T Consensus 78 ~~~~rV~IIGaG~~G~~l---a~~~~~~~-g~~iVg~~D~dp 115 (211)
T 2dt5_A 78 NRKWGLCIVGMGRLGSAL---ADYPGFGE-SFELRGFFDVDP 115 (211)
T ss_dssp TSCEEEEEECCSHHHHHH---HHCSCCCS-SEEEEEEEESCT
T ss_pred CCCCEEEEECccHHHHHH---HHhHhhcC-CcEEEEEEeCCH
Confidence 3568999999987 3433 33211223 589999998664
No 180
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=49.61 E-value=13 Score=32.76 Aligned_cols=38 Identities=8% Similarity=0.132 Sum_probs=21.3
Q ss_pred cCCCCCeeEEEEEeCC-ch-HHHHHHHhhhcCCCCceEEEEeeCC
Q 024345 123 PDIDPKYKVAVLASKQ-EH-CLVDFLYGWQEGKLPVEITCVISNH 165 (269)
Q Consensus 123 ~~~~~~~riav~~Sg~-g~-~l~~ll~~~~~g~l~~~i~~Visn~ 165 (269)
+...+++||+|+|.|. |. -+..|.+ .+ ..++++|....
T Consensus 5 p~~~~~~~igiIG~G~~g~~~~~~l~~---~~--~~~~v~v~d~~ 44 (315)
T 3c1a_A 5 PANNSPVRLALIGAGRWGKNYIRTIAG---LP--GAALVRLASSN 44 (315)
T ss_dssp ----CCEEEEEEECTTTTTTHHHHHHH---CT--TEEEEEEEESC
T ss_pred CCCCCcceEEEECCcHHHHHHHHHHHh---CC--CcEEEEEEeCC
Confidence 3455779999999998 43 3334333 22 36777666543
No 181
>1d1q_A Tyrosine phosphatase (E.C.3.1.3.48); beta-alpha-beta, hydrolase; HET: 4NP; 1.70A {Saccharomyces cerevisiae} SCOP: c.44.1.1 PDB: 1d2a_A* 1d1p_A*
Probab=49.59 E-value=49 Score=26.53 Aligned_cols=82 Identities=20% Similarity=0.256 Sum_probs=47.4
Q ss_pred CCeeEEEEEeCCc---hHHHHHHHhhhc-CCCC---ceEEEE-eeC-C-CCCCChhHHHHHHhCCCCeEEeCCCCCchHH
Q 024345 127 PKYKVAVLASKQE---HCLVDFLYGWQE-GKLP---VEITCV-ISN-H-DRGPNSHVIRFLERHGIPYHYLCAKENEREE 196 (269)
Q Consensus 127 ~~~riav~~Sg~g---~~l~~ll~~~~~-g~l~---~~i~~V-isn-~-~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~ 196 (269)
+++||.|+.+|+- .-.+.++.+.-. ..+. .++.-- +.. + ...++..+.+.++++||++- .-++.-. +
T Consensus 6 ~~~~VLFVCtgN~cRSpmAEal~~~~~~~~gl~~~~~~v~SAGt~~~~~g~~~~p~a~~~l~~~Gid~s-~~ar~l~-~- 82 (161)
T 1d1q_A 6 PKISVAFIALGNFCRSPMAEAIFKHEVEKANLENRFNKIDSFGTSNYHVGESPDHRTVSICKQHGVKIN-HKGKQIK-T- 82 (161)
T ss_dssp CCEEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEEESSCTTBTCCCCHHHHHHHHHTTCCCC-CCBCBCC-G-
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHHHHHHcCCCCCeEEEEeccccCCcCCCCCCHHHHHHHHHcCcCCC-ceEeECC-H-
Confidence 5679999999995 344555554322 1222 334222 221 1 11256789999999999986 3322111 1
Q ss_pred HHHHHhccCCEEEEEecc
Q 024345 197 ELLELVQNTDFLVLARYM 214 (269)
Q Consensus 197 ~l~~~l~~~Dlivla~y~ 214 (269)
+.++.+|+|+...-.
T Consensus 83 ---~~~~~~DlIl~M~~~ 97 (161)
T 1d1q_A 83 ---KHFDEYDYIIGMDES 97 (161)
T ss_dssp ---GGGGTCSEEEESSHH
T ss_pred ---HHHhhCCEEEEeCHH
Confidence 123378999998553
No 182
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=49.59 E-value=90 Score=27.97 Aligned_cols=51 Identities=12% Similarity=0.042 Sum_probs=31.9
Q ss_pred eeEEEEEeCC-c--hHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeC
Q 024345 129 YKVAVLASKQ-E--HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (269)
Q Consensus 129 ~riav~~Sg~-g--~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~ 188 (269)
|||++++.+. | .-+..|.+..++- .++|.. ++.. ...+..++.|++++.++
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~--Gh~V~v-~~~~------~~~~~v~~~g~~~~~l~ 54 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLREL--GADARM-CLPP------DYVERCAEVGVPMVPVG 54 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHT--TCCEEE-EECG------GGHHHHHHTTCCEEECS
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHC--CCeEEE-EeCH------HHHHHHHHcCCceeecC
Confidence 6898887776 4 2234455544432 267654 4433 25788889999999886
No 183
>2hma_A Probable tRNA (5-methylaminomethyl-2-thiouridylat methyltransferase; alpha-beta, beta barrel, structural genomics, PSI-2; HET: MSE SAM; 2.41A {Streptococcus pneumoniae}
Probab=49.34 E-value=19 Score=33.22 Aligned_cols=57 Identities=19% Similarity=0.234 Sum_probs=38.5
Q ss_pred CCeeEEEEEeCCc-h-HHHHHHHhhhcCCCCceEEEEeeCCCCCC-----------ChhHHHHHHhCCCCeEEeC
Q 024345 127 PKYKVAVLASKQE-H-CLVDFLYGWQEGKLPVEITCVISNHDRGP-----------NSHVIRFLERHGIPYHYLC 188 (269)
Q Consensus 127 ~~~riav~~Sg~g-~-~l~~ll~~~~~g~l~~~i~~Visn~~~~~-----------~~~v~~~a~~~gIP~~~~~ 188 (269)
+.+||++..||.- | .+..++.. .| .++.+|..++.... -..+.++|+++|||++.++
T Consensus 8 ~~~kVlVa~SGGvDSsv~a~lL~~--~G---~~V~~v~~~~~~~~~~~~~c~~~~d~~~a~~va~~lGIp~~vv~ 77 (376)
T 2hma_A 8 SKTRVVVGMSGGVDSSVTALLLKE--QG---YDVIGIFMKNWDDTDENGVCTATEDYKDVVAVADQIGIPYYSVN 77 (376)
T ss_dssp GGSEEEEECCSSHHHHHHHHHHHH--TT---CEEEEEEEECCCCCC----CHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred CCCeEEEEEeCHHHHHHHHHHHHH--cC---CcEEEEEEECCCcccccccCCCHHHHHHHHHHHHHhCCcEEEEe
Confidence 4579999999974 3 33344432 34 68888876642101 0247888999999999987
No 184
>4etm_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.60A {Bacillus subtilis}
Probab=48.74 E-value=44 Score=27.38 Aligned_cols=85 Identities=14% Similarity=0.196 Sum_probs=47.3
Q ss_pred CCCCeeEEEEEeCCc---hHHHHHHHhh-hcCCCC--ceE-EEEeeC-CC-CCCChhHHHHHHhCCCCeEEeCCCCCchH
Q 024345 125 IDPKYKVAVLASKQE---HCLVDFLYGW-QEGKLP--VEI-TCVISN-HD-RGPNSHVIRFLERHGIPYHYLCAKENERE 195 (269)
Q Consensus 125 ~~~~~riav~~Sg~g---~~l~~ll~~~-~~g~l~--~~i-~~Visn-~~-~~~~~~v~~~a~~~gIP~~~~~~~~~~~e 195 (269)
..+|+||.|.-+|+- ...+.+++.. ++..+. ++| ++-+.. +. ..++..+.+.++++||++--.-++.-. +
T Consensus 15 ~~~M~kVLFVCtGNiCRSpmAE~i~r~~~~~~gl~~~~~v~SAGt~~~~~G~~~d~~a~~~l~~~Gid~s~h~ar~l~-~ 93 (173)
T 4etm_A 15 RGSMISVLFVCLGNICRSPMAEAIFRDLAAKKGLEGKIKADSAGIGGWHIGNPPHEGTQEILRREGISFDGMLARQVS-E 93 (173)
T ss_dssp CSSCEEEEEEESSSSSHHHHHHHHHHHHHHHTTCTTTEEEEEEESSCTTTTCCCCHHHHHHHHHTTCCCTTCCCCBCC-H
T ss_pred CCCccEEEEEeCCcchhhHHHHHHHHHHHHHcCCCCceEEeccccccCCCCCCCCHHHHHHHHHCCccccCCccccCC-H
Confidence 456789999999995 3445555432 122222 344 222322 21 124567899999999987532211111 1
Q ss_pred HHHHHHhccCCEEEEEecc
Q 024345 196 EELLELVQNTDFLVLARYM 214 (269)
Q Consensus 196 ~~l~~~l~~~Dlivla~y~ 214 (269)
+ .++++|+|+...-.
T Consensus 94 ~----d~~~~DlIl~Md~~ 108 (173)
T 4etm_A 94 Q----DLDDFDYIIAMDAE 108 (173)
T ss_dssp H----HHHHCSEEEESSHH
T ss_pred h----hcCCCCEEEEeCch
Confidence 1 22368999987543
No 185
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=48.73 E-value=26 Score=31.26 Aligned_cols=47 Identities=17% Similarity=0.028 Sum_probs=26.3
Q ss_pred CeeEEEEEeCC-chHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCC
Q 024345 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP 183 (269)
Q Consensus 128 ~~riav~~Sg~-g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP 183 (269)
.+||+|+|.|. |..+-..+.. .|. ..+| ++.++ +....+.+.+.|+-
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~--~G~-~~~V--~~~dr----~~~~~~~a~~~G~~ 80 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRR--SGF-KGKI--YGYDI----NPESISKAVDLGII 80 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHH--TTC-CSEE--EEECS----CHHHHHHHHHTTSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHh--CCC-CCEE--EEEEC----CHHHHHHHHHCCCc
Confidence 47999999887 4444333322 342 1244 34555 22345667778873
No 186
>2w6k_A COBE; biosynthetic protein, cobalamin, complete proteome, vitamin B12; 1.70A {Pseudomonas aeruginosa} SCOP: c.151.1.1 PDB: 2bsn_A 2w6l_A
Probab=48.61 E-value=38 Score=27.22 Aligned_cols=63 Identities=14% Similarity=0.157 Sum_probs=37.7
Q ss_pred CCCeeEEEEEeCCchHHHHH---HH-hhhcCCC-CceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeC
Q 024345 126 DPKYKVAVLASKQEHCLVDF---LY-GWQEGKL-PVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (269)
Q Consensus 126 ~~~~riav~~Sg~g~~l~~l---l~-~~~~g~l-~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~ 188 (269)
.+++=++-+|...|...+.| ++ .+++..+ +..|.++.|-..+.....+.++|+++|+|+..++
T Consensus 8 ~p~~lvvGIGcrrg~~~~~i~~ai~~aL~~~~l~~~~v~~latid~K~dE~gL~~~A~~lg~pl~~~~ 75 (145)
T 2w6k_A 8 IPSLLIAGIGCRRGCSAEHLRALLERTLGEHGRSLAELDALASIDGKRDEPGLRQLATLLERPVHFLA 75 (145)
T ss_dssp CCCCEEEEEEECTTCCHHHHHHHHHHHHHHTTCCGGGCCEEEEECSSSCCHHHHHHHHHHTSCEEEEC
T ss_pred cCCeEEEEEeeCCCCCHHHHHHHHHHHHHHcCCCHHHcceEechHHhCCCHHHHHHHHHhCCCcEEeC
Confidence 35556666777777433333 32 2323333 3456556554333234678999999999999986
No 187
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=48.48 E-value=26 Score=28.88 Aligned_cols=75 Identities=7% Similarity=0.082 Sum_probs=42.3
Q ss_pred CCCCeeEEEEEeCCchHHHHHHHhhhc-CCCCceEEEEeeCCCCCCCh-hHHHHHHhCCCCeEEeC-CCCCch--HHHHH
Q 024345 125 IDPKYKVAVLASKQEHCLVDFLYGWQE-GKLPVEITCVISNHDRGPNS-HVIRFLERHGIPYHYLC-AKENER--EEELL 199 (269)
Q Consensus 125 ~~~~~riav~~Sg~g~~l~~ll~~~~~-g~l~~~i~~Visn~~~~~~~-~v~~~a~~~gIP~~~~~-~~~~~~--e~~l~ 199 (269)
..+++|++|+.+|+.-. +++. . |+. .| .++ .+.++.+++|..+.... ..++.. .+.+.
T Consensus 12 ~~~~~rv~IittGde~~-~~~~----~~G~i--------~D----sn~~~L~~~l~~~G~~v~~~~iv~Dd~~~I~~al~ 74 (178)
T 2pjk_A 12 APKSLNFYVITISTSRY-EKLL----KKEPI--------VD----ESGDIIKQLLIENGHKIIGYSLVPDDKIKILKAFT 74 (178)
T ss_dssp -CCCCEEEEEEECHHHH-HHHH----TTCCC--------CC----HHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHH
T ss_pred CCCCCEEEEEEeCcccc-cccc----cCCeE--------ee----hHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHH
Confidence 44678999999997433 3332 3 431 11 133 46778889998766543 112111 12333
Q ss_pred HHhcc--CCEEEEEeccee
Q 024345 200 ELVQN--TDFLVLARYMQV 216 (269)
Q Consensus 200 ~~l~~--~Dlivla~y~~i 216 (269)
+.+++ +|+|++.|=.-.
T Consensus 75 ~a~~~~~~DlVittGG~s~ 93 (178)
T 2pjk_A 75 DALSIDEVDVIISTGGTGY 93 (178)
T ss_dssp HHHTCTTCCEEEEESCCSS
T ss_pred HHHhcCCCCEEEECCCCCC
Confidence 44444 899999875443
No 188
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=47.94 E-value=93 Score=26.57 Aligned_cols=74 Identities=16% Similarity=0.168 Sum_probs=41.5
Q ss_pred CeeEEEEEe-CC-c-hHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhcc
Q 024345 128 KYKVAVLAS-KQ-E-HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQN 204 (269)
Q Consensus 128 ~~riav~~S-g~-g-~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~~ 204 (269)
++||+|.|. |. | +..+.|++ .| ++|.++.-+. . +.....+.....|+.++..|.. +.+.+.+.+++
T Consensus 11 ~~~ilVtGatG~iG~~l~~~L~~---~g---~~V~~l~R~~-~-~~~~~~~~l~~~~v~~v~~Dl~---d~~~l~~a~~~ 79 (318)
T 2r6j_A 11 KSKILIFGGTGYIGNHMVKGSLK---LG---HPTYVFTRPN-S-SKTTLLDEFQSLGAIIVKGELD---EHEKLVELMKK 79 (318)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHH---TT---CCEEEEECTT-C-SCHHHHHHHHHTTCEEEECCTT---CHHHHHHHHTT
T ss_pred CCeEEEECCCchHHHHHHHHHHH---CC---CcEEEEECCC-C-chhhHHHHhhcCCCEEEEecCC---CHHHHHHHHcC
Confidence 357888874 33 4 45555555 35 5665443332 1 1222222224578888776632 24567778889
Q ss_pred CCEEEEEe
Q 024345 205 TDFLVLAR 212 (269)
Q Consensus 205 ~Dlivla~ 212 (269)
+|.+|.+.
T Consensus 80 ~d~vi~~a 87 (318)
T 2r6j_A 80 VDVVISAL 87 (318)
T ss_dssp CSEEEECC
T ss_pred CCEEEECC
Confidence 99987654
No 189
>2der_A TRNA-specific 2-thiouridylase MNMA; protein-RNA complex, transferase/RNA complex; 3.10A {Escherichia coli} PDB: 2det_A 2deu_A*
Probab=47.53 E-value=25 Score=32.59 Aligned_cols=58 Identities=16% Similarity=0.076 Sum_probs=38.6
Q ss_pred CCeeEEEEEeCCc--hHHHHHHHhhhcCCCCceEEEEeeCCCCCC-----------ChhHHHHHHhCCCCeEEeCC
Q 024345 127 PKYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGP-----------NSHVIRFLERHGIPYHYLCA 189 (269)
Q Consensus 127 ~~~riav~~Sg~g--~~l~~ll~~~~~g~l~~~i~~Visn~~~~~-----------~~~v~~~a~~~gIP~~~~~~ 189 (269)
+.+||++..||.- +.+..++.. .| .++.+|..++-... -..+.+.|+++|||++.++.
T Consensus 16 ~~~kVvVa~SGGvDSsv~a~lL~~--~G---~~V~~v~~~~~~~~~~~~~~~s~~d~~~a~~va~~LGIp~~vvd~ 86 (380)
T 2der_A 16 TAKKVIVGMSGGVDSSVSAWLLQQ--QG---YQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGIELHTVNF 86 (380)
T ss_dssp -CCEEEEECCSCSTTHHHHHHHHT--TC---CEEEEEEEECCCCCSHHHHHHHHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred CCCEEEEEEEChHHHHHHHHHHHH--cC---CeEEEEEEEcCccccccCCCCCHHHHHHHHHHHHHcCCcEEEEeC
Confidence 4579999999974 444444442 34 68888877542101 12478889999999999873
No 190
>1rlg_A 50S ribosomal protein L7AE; protein-RNA, structural protein/RNA complex; HET: 5BU; 2.70A {Archaeoglobus fulgidus} SCOP: d.79.3.1
Probab=47.25 E-value=35 Score=26.14 Aligned_cols=49 Identities=14% Similarity=0.279 Sum_probs=30.9
Q ss_pred EEeCCchHHHHHHHhhhcCCCCceEEEEeeCCCCCC-ChhHHHHHHhCCCCeEEeC
Q 024345 134 LASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGP-NSHVIRFLERHGIPYHYLC 188 (269)
Q Consensus 134 ~~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~-~~~v~~~a~~~gIP~~~~~ 188 (269)
+.+|..... ++++.|+ +.++.+-.|-++.. ..++..+|+++|||++++.
T Consensus 28 l~~G~~~v~----kal~~gk--a~lViiA~D~~~~~~~~~l~~lc~~~~Vp~~~~~ 77 (119)
T 1rlg_A 28 VKKGTNETT----KAVERGL--AKLVYIAEDVDPPEIVAHLPLLCEEKNVPYIYVK 77 (119)
T ss_dssp EEESHHHHH----HHHTTTC--CSEEEEESCCSCSTTTTHHHHHHHHHTCCEEEES
T ss_pred eeECHHHHH----HHHHcCC--CcEEEEeCCCChHHHHHHHHHHHHHcCCCEEEeC
Confidence 444443444 4444564 56666666653211 3678899999999998875
No 191
>3j21_Z 50S ribosomal protein L30E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=46.68 E-value=20 Score=26.60 Aligned_cols=48 Identities=10% Similarity=0.135 Sum_probs=28.0
Q ss_pred EEeCCchHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEe
Q 024345 134 LASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYL 187 (269)
Q Consensus 134 ~~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~ 187 (269)
+.+|....+.+ ++.|+ +.++.+-.|-+..-..++..+|+.++||++.+
T Consensus 16 ~v~G~~~v~ka----i~~gk--a~lViiA~D~~~~~~~~i~~~c~~~~ip~~~~ 63 (99)
T 3j21_Z 16 VVLGSNETIRL----AKTGG--AKLIIVAKNAPKEIKDDIYYYAKLSDIPVYEF 63 (99)
T ss_dssp EEESHHHHHHH----HHHTC--CSEEEEECCCCHHHHHHHHHHHHHTTCCEEEE
T ss_pred EeECHHHHHHH----HHcCC--ccEEEEeCCCCHHHHHHHHHHHHHcCCCEEEe
Confidence 44554445444 34564 55665555532101146788899999998766
No 192
>1k92_A Argininosuccinate synthase, argininosuccinate SY; N-type ATP pyrophosphatase, ligase; 1.60A {Escherichia coli} SCOP: c.26.2.1 d.210.1.1 PDB: 1k97_A* 1kp2_A* 1kp3_A*
Probab=46.47 E-value=40 Score=32.28 Aligned_cols=59 Identities=8% Similarity=0.001 Sum_probs=41.0
Q ss_pred CCCeeEEEEEeCCc--hHHHHHHHhhhcCCCCceEEEEeeCCCCC---CChhHHHHHHhCCC-CeEEeCC
Q 024345 126 DPKYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRG---PNSHVIRFLERHGI-PYHYLCA 189 (269)
Q Consensus 126 ~~~~riav~~Sg~g--~~l~~ll~~~~~g~l~~~i~~Visn~~~~---~~~~v~~~a~~~gI-P~~~~~~ 189 (269)
.+..||++..||.- +++..++.. .| .+|.++..|.... .-..+.+.|++.|| |+++++.
T Consensus 8 ~~~~KVvVA~SGGlDSSvll~~L~e--~G---~eViavtvd~Gq~~~~ele~a~~~A~~lGi~~~~vvD~ 72 (455)
T 1k92_A 8 PVGQRIGIAFSGGLDTSAALLWMRQ--KG---AVPYAYTANLGQPDEEDYDAIPRRAMEYGAENARLIDC 72 (455)
T ss_dssp CTTSEEEEECCSSHHHHHHHHHHHH--TT---CEEEEEEEECCCTTCSCTTHHHHHHHHHTCSEEEEEEC
T ss_pred cCCCeEEEEEcChHHHHHHHHHHHH--cC---CEEEEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEeC
Confidence 45679999999974 455455542 34 6888887775321 12468999999999 7887763
No 193
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=46.13 E-value=1.4e+02 Score=26.89 Aligned_cols=84 Identities=11% Similarity=0.133 Sum_probs=46.4
Q ss_pred CCCeeEEEEEeCCc--hHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCC-CeEEeCC-CC--CchH----
Q 024345 126 DPKYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGI-PYHYLCA-KE--NERE---- 195 (269)
Q Consensus 126 ~~~~riav~~Sg~g--~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gI-P~~~~~~-~~--~~~e---- 195 (269)
..|+||++++.-.. .-+..|++.+++.. ..++..++|.... .-..+..+.+|| |-+.++- .. +-.+
T Consensus 23 ~~m~ki~~v~Gtr~~~~~~a~li~~l~~~~-~~~~~~~~tG~h~---~~~~~~~~~~~i~~~~~l~~~~~~~~~~~~~~~ 98 (396)
T 3dzc_A 23 NAMKKVLIVFGTRPEAIKMAPLVQQLCQDN-RFVAKVCVTGQHR---EMLDQVLELFSITPDFDLNIMEPGQTLNGVTSK 98 (396)
T ss_dssp -CCEEEEEEECSHHHHHHHHHHHHHHHHCT-TEEEEEEECCSSS---HHHHHHHHHTTCCCSEECCCCCTTCCHHHHHHH
T ss_pred CCCCeEEEEEeccHhHHHHHHHHHHHHhCC-CCcEEEEEecccH---HHHHHHHHhcCCCCceeeecCCCCCCHHHHHHH
Confidence 45678876654442 45566666666531 3667667775421 123455578999 5455442 11 1111
Q ss_pred --HHHHHHhc--cCCEEEEEec
Q 024345 196 --EELLELVQ--NTDFLVLARY 213 (269)
Q Consensus 196 --~~l~~~l~--~~Dlivla~y 213 (269)
.++.+.++ +||++++.+.
T Consensus 99 ~~~~l~~~l~~~kPDvVi~~g~ 120 (396)
T 3dzc_A 99 ILLGMQQVLSSEQPDVVLVHGD 120 (396)
T ss_dssp HHHHHHHHHHHHCCSEEEEETT
T ss_pred HHHHHHHHHHhcCCCEEEEECC
Confidence 23445555 8999999773
No 194
>1ulr_A Putative acylphosphatase; hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: d.58.10.1
Probab=46.01 E-value=79 Score=22.87 Aligned_cols=58 Identities=17% Similarity=0.082 Sum_probs=43.2
Q ss_pred HHHHHHHhhhhhhccceeeeeecCCCCCeeEEEEEeCCchHHHHHHHhhhcCCCCceEEEEe
Q 024345 101 QMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVI 162 (269)
Q Consensus 101 ~L~e~L~~la~el~l~~~~~~~~~~~~~~riav~~Sg~g~~l~~ll~~~~~g~l~~~i~~Vi 162 (269)
-+|--...+|.++++.=|+... .+. +|-+.+.|+...+.++++.+++|.-.+.|.-+-
T Consensus 16 GFR~~v~~~A~~lgl~G~V~N~--~dG--~Vei~~eG~~~~i~~f~~~l~~gP~~a~V~~v~ 73 (88)
T 1ulr_A 16 GYRAFAQKKALELGLSGYAENL--PDG--RVEVVAEGPKEALELFLHHLKQGPRLARVEAVE 73 (88)
T ss_dssp SHHHHHHHHHHHTTCEEEEEEC--TTS--CEEEEEESCHHHHHHHHHHHHHCSTTCEEEEEE
T ss_pred CHHHHHHHHHHHcCCeEEEEEC--CCC--cEEEEEEeCHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 3778888899999997765432 223 788899999888999999888775446776653
No 195
>2xzm_U Ribosomal protein L7AE containing protein; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_U
Probab=45.91 E-value=30 Score=27.18 Aligned_cols=48 Identities=17% Similarity=0.263 Sum_probs=30.4
Q ss_pred EEeCCchHHHHHHHhhhcCCCCceEEEEeeCCCCCCC--hhHHHHHHhCCCCeEEeC
Q 024345 134 LASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPN--SHVIRFLERHGIPYHYLC 188 (269)
Q Consensus 134 ~~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~--~~v~~~a~~~gIP~~~~~ 188 (269)
+.+|.-..+.+| +.|+ +.++.+-.|-++ ++ ..+..+|+.+|||+++++
T Consensus 25 l~~G~~~v~Kai----~~gk--a~LViiA~D~~p-~~~~~~i~~lc~~~~Ip~~~v~ 74 (126)
T 2xzm_U 25 ISKGLHEVLRTI----EAKQ--ALFVCVAEDCDQ-GNYVKLVKALCAKNEIKYVSVP 74 (126)
T ss_dssp EEESHHHHHHHH----HHTC--CSEEEEESSCCS-TTHHHHHHHHHHHTTCCEEEES
T ss_pred EeecHHHHHHHH----HcCC--ceEEEEeCCCCh-HHHHHHHHHHHHHhCCCEEEEC
Confidence 344544555443 3463 566656555521 22 468899999999999987
No 196
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=45.55 E-value=74 Score=28.51 Aligned_cols=36 Identities=8% Similarity=0.107 Sum_probs=20.8
Q ss_pred CCCeeEEEEEeCCc-hH-HHHHHHhhhcCCCCceEEEEeeCC
Q 024345 126 DPKYKVAVLASKQE-HC-LVDFLYGWQEGKLPVEITCVISNH 165 (269)
Q Consensus 126 ~~~~riav~~Sg~g-~~-l~~ll~~~~~g~l~~~i~~Visn~ 165 (269)
.+++||+|+|.|.. .. ....+.. .+ .+++++|+...
T Consensus 5 ~~~~rvgiiG~G~~g~~~~~~~l~~--~~--~~~l~av~d~~ 42 (364)
T 3e82_A 5 NNTINIALIGYGFVGKTFHAPLIRS--VP--GLNLAFVASRD 42 (364)
T ss_dssp --CEEEEEECCSHHHHHTHHHHHHT--ST--TEEEEEEECSC
T ss_pred CCcceEEEECCCHHHHHHHHHHHhh--CC--CeEEEEEEcCC
Confidence 46789999999873 32 3333332 12 36787766543
No 197
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=45.39 E-value=56 Score=28.80 Aligned_cols=65 Identities=15% Similarity=0.157 Sum_probs=34.8
Q ss_pred CCeeEEEEEeCC-chHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhccC
Q 024345 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNT 205 (269)
Q Consensus 127 ~~~riav~~Sg~-g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~~~ 205 (269)
.++||+|+|.|. |..+-..+.. .| ++|. +.|++ ...+ +.+.+.|+.+. . .+.+.++++
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~--~G---~~V~--~~dr~---~~~~-~~l~~~g~~~~--~--------~~~e~~~~a 88 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCE--AG---YALQ--VWNRT---PARA-ASLAALGATIH--E--------QARAAARDA 88 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHH--TT---CEEE--EECSC---HHHH-HHHHTTTCEEE--S--------SHHHHHTTC
T ss_pred CCCEEEEECccHHHHHHHHHHHh--CC---CeEE--EEcCC---HHHH-HHHHHCCCEee--C--------CHHHHHhcC
Confidence 457999999998 5544333322 35 4543 45552 2233 33444465332 1 122344578
Q ss_pred CEEEEEe
Q 024345 206 DFLVLAR 212 (269)
Q Consensus 206 Dlivla~ 212 (269)
|+|+++-
T Consensus 89 DvVi~~v 95 (320)
T 4dll_A 89 DIVVSML 95 (320)
T ss_dssp SEEEECC
T ss_pred CEEEEEC
Confidence 8887764
No 198
>2ale_A SNU13, NHP2/L7AE family protein YEL026W; splicing, RNA, yeast, His-TAG, RNA binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: d.79.3.1 PDB: 1zwz_A 2ozb_A 3siu_A 3siv_A 1e7k_A
Probab=45.14 E-value=24 Score=28.05 Aligned_cols=49 Identities=14% Similarity=0.188 Sum_probs=30.0
Q ss_pred EEeCCchHHHHHHHhhhcCCCCceEEEEeeCCCCC-CChhHHHHHHhCCCCeEEeC
Q 024345 134 LASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRG-PNSHVIRFLERHGIPYHYLC 188 (269)
Q Consensus 134 ~~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~-~~~~v~~~a~~~gIP~~~~~ 188 (269)
+.+|.-..+. .+++|+ +.++.+-.|-+.. -...+..+|+++|||++++.
T Consensus 33 l~~G~~~v~k----ai~~gk--akLViiA~D~~p~~~~~~l~~lc~~~~VP~~~v~ 82 (134)
T 2ale_A 33 LKKGANEATK----TLNRGI--SEFIIMAADCEPIEILLHLPLLCEDKNVPYVFVP 82 (134)
T ss_dssp EEESHHHHHH----HHHHTC--EEEEEEETTCSSGGGGTHHHHHHHHHTCCEEEES
T ss_pred cccCchHHHH----HHHhCC--CeEEEEeCCCCHHHHHHHHHHHHHhcCCCEEEEC
Confidence 4445434444 334564 5666555554321 12468899999999999875
No 199
>1vq8_F 50S ribosomal protein L7AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.79.3.1 PDB: 1vq4_F* 1vq5_F* 1vq6_F* 1vq7_F* 1s72_F* 1vq9_F* 1vqk_F* 1vql_F* 1vqm_F* 1vqn_F* 1vqo_F* 1vqp_F* 1yhq_F* 1yi2_F* 1yij_F* 1yit_F* 1yj9_F* 1yjn_F* 1yjw_F* 2otj_F* ...
Probab=44.91 E-value=35 Score=26.16 Aligned_cols=49 Identities=12% Similarity=0.308 Sum_probs=30.4
Q ss_pred EEeCCchHHHHHHHhhhcCCCCceEEEEeeCCCCCC-ChhHHHHHHhCCCCeEEeC
Q 024345 134 LASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGP-NSHVIRFLERHGIPYHYLC 188 (269)
Q Consensus 134 ~~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~-~~~v~~~a~~~gIP~~~~~ 188 (269)
+.+|......+ ++.|+ +.++.+-.|-+... ..++..+|+++|||++++.
T Consensus 30 l~~G~~~v~ka----l~~gk--a~lViiA~D~~~~~~~~~l~~lc~~~~Vp~~~~~ 79 (120)
T 1vq8_F 30 VKKGTNETTKS----IERGS--AELVFVAEDVQPEEIVMHIPELADEKGVPFIFVE 79 (120)
T ss_dssp EEESHHHHHHH----HHHTC--CSEEEEESCCSSGGGTTTHHHHHHTTCCCEEEES
T ss_pred EeECHHHHHHH----HHcCC--ceEEEEeCCCChHHHHHHHHHHHHhcCCCEEEEC
Confidence 44454444444 34564 56666666653211 3568899999999998875
No 200
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=44.86 E-value=22 Score=31.83 Aligned_cols=46 Identities=7% Similarity=0.074 Sum_probs=27.6
Q ss_pred CeeEEEEEeCCc-h-HHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCC
Q 024345 128 KYKVAVLASKQE-H-CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP 183 (269)
Q Consensus 128 ~~riav~~Sg~g-~-~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP 183 (269)
|+||+|+|.|.. . .....+.. .+ .+++++|+... ...++|+++++|
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~l~~--~~--~~~l~av~d~~------~~~~~a~~~~~~ 49 (349)
T 3i23_A 2 TVKMGFIGFGKSANRYHLPYVMI--RE--TLEVKTIFDLH------VNEKAAAPFKEK 49 (349)
T ss_dssp CEEEEEECCSHHHHHTTHHHHTT--CT--TEEEEEEECTT------CCHHHHHHHHTT
T ss_pred eeEEEEEccCHHHHHHHHHHHhh--CC--CeEEEEEECCC------HHHHHHHhhCCC
Confidence 579999999973 3 23333332 12 37888777643 246777775443
No 201
>3bl5_A Queuosine biosynthesis protein QUEC; PREQ1 biosynthesis, RNA modification, tRNA, hydrolase; 2.95A {Bacillus subtilis}
Probab=44.56 E-value=58 Score=26.48 Aligned_cols=56 Identities=20% Similarity=0.141 Sum_probs=36.3
Q ss_pred CeeEEEEEeCCc-h-HHHHHHHhhhcCCCCceEEEEeeCCCCCCC---hhHHHHHHhCCCCeEEeC
Q 024345 128 KYKVAVLASKQE-H-CLVDFLYGWQEGKLPVEITCVISNHDRGPN---SHVIRFLERHGIPYHYLC 188 (269)
Q Consensus 128 ~~riav~~Sg~g-~-~l~~ll~~~~~g~l~~~i~~Visn~~~~~~---~~v~~~a~~~gIP~~~~~ 188 (269)
+.||++..||.- | .+-.++.. .+ .++.++-.++...+. ..+.++|+++|||++.++
T Consensus 3 ~~~v~v~lSGG~DS~~ll~ll~~--~~---~~v~~~~~~~~~~~~~e~~~a~~~a~~lgi~~~~~~ 63 (219)
T 3bl5_A 3 KEKAIVVFSGGQDSTTCLLWALK--EF---EEVETVTFHYNQRHSQEVEVAKSIAEKLGVKNHLLD 63 (219)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHH--HC---SEEEEEEEESSCTTCHHHHHHHHHHHTTCCCEEEEE
T ss_pred CCCEEEEccCcHHHHHHHHHHHH--cC---CceEEEEEeCCCCCHHHHHHHHHHHHHhCCCeEEEe
Confidence 358999999974 3 33444432 34 467666655432111 257888999999999877
No 202
>2fc3_A 50S ribosomal protein L7AE; alpha-beta-alpha sandwich, ribosome, RNA binding protein; 1.56A {Aeropyrum pernix} SCOP: d.79.3.1 PDB: 3pla_C* 3id5_C* 3hax_D* 2hvy_D* 3hay_D* 3nvi_B 3nmu_C 3nvk_E* 3lwr_C 3lwo_C* 3lwq_C* 3lwp_C 3lwv_C 3hjw_C* 2czw_A 1pxw_A
Probab=44.51 E-value=38 Score=26.16 Aligned_cols=49 Identities=14% Similarity=0.264 Sum_probs=30.2
Q ss_pred EEeCCchHHHHHHHhhhcCCCCceEEEEeeCCCCCC-ChhHHHHHHhCCCCeEEeC
Q 024345 134 LASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGP-NSHVIRFLERHGIPYHYLC 188 (269)
Q Consensus 134 ~~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~-~~~v~~~a~~~gIP~~~~~ 188 (269)
+.+|...... +++.|+ +.++.+-.|-+... ..++..+|+++|||++++.
T Consensus 29 l~~G~~~v~k----al~~gk--a~lViiA~D~~~~~~~~~l~~lc~~~~Vp~~~v~ 78 (124)
T 2fc3_A 29 IKKGTNETTK----AVERGL--AKLVVIAEDVDPPEIVMHLPLLCDEKKIPYVYVP 78 (124)
T ss_dssp EEESHHHHHH----HHHTTC--CSEEEEETTCSSGGGTTTHHHHHHHTTCCEEEES
T ss_pred ccCCHHHHHH----HHHcCC--ceEEEEcCCCChHHHHHHHHHHHHHcCCCEEEEC
Confidence 4445434444 344564 56665556543211 3568899999999998875
No 203
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=44.42 E-value=1.1e+02 Score=26.44 Aligned_cols=83 Identities=8% Similarity=0.096 Sum_probs=44.9
Q ss_pred CCeeEEEEEeCCc--hHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCe-EEeCC-CC-Cch-------
Q 024345 127 PKYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPY-HYLCA-KE-NER------- 194 (269)
Q Consensus 127 ~~~riav~~Sg~g--~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~-~~~~~-~~-~~~------- 194 (269)
.||||++++...+ ..+..+++.+++.. .+++..+++.. ......+..+.+|+++ +.++. .. ...
T Consensus 4 ~mmkIl~v~~~~~~~~~~~~l~~~L~~~~-g~~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (376)
T 1v4v_A 4 GMKRVVLAFGTRPEATKMAPVYLALRGIP-GLKPLVLLTGQ---HREQLRQALSLFGIQEDRNLDVMQERQALPDLAARI 79 (376)
T ss_dssp CCEEEEEEECSHHHHHHHHHHHHHHHTST-TEEEEEEECSS---CHHHHHHHHHTTTCCCSEECCCCSSCCCHHHHHHHH
T ss_pred CceEEEEEEeccHHHHHHHHHHHHHHhCC-CCceEEEEcCC---cHHHHHHHHHHcCCCcccccccCCCCccHHHHHHHH
Confidence 3589988875432 23455666665420 25666666643 1222344556688876 34431 11 110
Q ss_pred HHHHHHHhc--cCCEEEEEec
Q 024345 195 EEELLELVQ--NTDFLVLARY 213 (269)
Q Consensus 195 e~~l~~~l~--~~Dlivla~y 213 (269)
-..+.+.++ +||+|++.++
T Consensus 80 ~~~l~~~l~~~~pDvv~~~~~ 100 (376)
T 1v4v_A 80 LPQAARALKEMGADYVLVHGD 100 (376)
T ss_dssp HHHHHHHHHHTTCSEEEEESS
T ss_pred HHHHHHHHHHcCCCEEEEeCC
Confidence 123445555 8999999764
No 204
>1xbi_A 50S ribosomal protein L7AE; alpha-beta-alpha sandwich fold, RNA binding protein/structural protein complex; HET: EPE; 1.45A {Methanocaldococcus jannaschii} SCOP: d.79.3.1 PDB: 1ra4_A* 1sds_A 3paf_A
Probab=44.34 E-value=29 Score=26.77 Aligned_cols=49 Identities=16% Similarity=0.341 Sum_probs=30.8
Q ss_pred EEeCCchHHHHHHHhhhcCCCCceEEEEeeCCCCCC-ChhHHHHHHhCCCCeEEeC
Q 024345 134 LASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGP-NSHVIRFLERHGIPYHYLC 188 (269)
Q Consensus 134 ~~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~-~~~v~~~a~~~gIP~~~~~ 188 (269)
+.+|......+ ++.|+ +.++.+-.|-++.. ..++..+|+++|||++++.
T Consensus 30 l~~G~~~v~ka----i~~gk--a~lViiA~D~~p~~~~~~l~~lc~~~~VP~~~v~ 79 (120)
T 1xbi_A 30 IKKGANEVTKA----VERGI--AKLVIIAEDVKPEEVVAHLPYLCEEKGIPYAYVA 79 (120)
T ss_dssp EEESHHHHHHH----HHHTC--CSEEEEESCCSSGGGTTTHHHHHHHHTCCEEEES
T ss_pred ccccHHHHHHH----HHcCC--ceEEEEcCCCChHHHHHHHHHHHHhcCCCEEEeC
Confidence 45554445443 33564 56666666653211 3578899999999998875
No 205
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=44.12 E-value=1.3e+02 Score=27.03 Aligned_cols=45 Identities=9% Similarity=-0.013 Sum_probs=26.9
Q ss_pred HHhccCCEEEEEeccee-----------------ee---cccccccccccCCCccccCCCCCCCCCcHHHHH
Q 024345 200 ELVQNTDFLVLARYMQV-----------------NR---IRLYVAQLFSCLVTEQLTVLNSSLGGINISLSS 251 (269)
Q Consensus 200 ~~l~~~Dlivla~y~~i-----------------l~---l~~~~~~~iN~~~~~iHpSLLP~~rG~~p~~~A 251 (269)
+.++++|+|.+-.|-+. +. ++..+..++= .|| ||.+||...-...
T Consensus 209 eav~~aDvvy~~~~~smg~~~~~~~~~~~~~~y~v~~e~l~~a~~~ai~-----mHp--lP~~Rg~EI~~eV 273 (301)
T 2ef0_A 209 EAALGAHALYTDVWTSMGQEAEREKRLRDFQGFQVNGELLKLLRPEGVF-----LHC--LPAHYGEETTEEA 273 (301)
T ss_dssp HHHTTCSEEEECCCC--------CHHHHHTTTCCBCHHHHTTSCTTCEE-----EEC--SCCCBTTTBCHHH
T ss_pred HHhcCCCEEEecCcccCCcccchhHHHHHhhccccCHHHHHhcCCCcEE-----ECC--CCCCCCCccCHHH
Confidence 45668999999776221 11 3333334555 887 8999995544333
No 206
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=44.01 E-value=1e+02 Score=23.22 Aligned_cols=82 Identities=13% Similarity=0.231 Sum_probs=46.9
Q ss_pred CeeEEEEEeCCc-hHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhccCC
Q 024345 128 KYKVAVLASKQE-HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTD 206 (269)
Q Consensus 128 ~~riav~~Sg~g-~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~~~D 206 (269)
+.+|+++|.-.. .++..++++++.=.-..++.+++..... ....+.++++++|+.++. .. - . .+++.++++.+|
T Consensus 2 ~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~l~i~G~g~-~~~~~~~~~~~~~~~v~~-g~-~-~-~~~~~~~~~~ad 76 (166)
T 3qhp_A 2 PFKIAMVGRYSNEKNQSVLIKAVALSKYKQDIVLLLKGKGP-DEKKIKLLAQKLGVKAEF-GF-V-N-SNELLEILKTCT 76 (166)
T ss_dssp CEEEEEESCCSTTTTHHHHHHHHHTCTTGGGEEEEEECCST-THHHHHHHHHHHTCEEEC-CC-C-C-HHHHHHHHTTCS
T ss_pred ceEEEEEeccchhcCHHHHHHHHHHhccCCCeEEEEEeCCc-cHHHHHHHHHHcCCeEEE-ee-c-C-HHHHHHHHHhCC
Confidence 345555555442 4555666655431111245555554321 235678889999984444 31 1 1 456888888999
Q ss_pred EEEEEecc
Q 024345 207 FLVLARYM 214 (269)
Q Consensus 207 livla~y~ 214 (269)
++|+....
T Consensus 77 v~v~ps~~ 84 (166)
T 3qhp_A 77 LYVHAANV 84 (166)
T ss_dssp EEEECCCS
T ss_pred EEEECCcc
Confidence 99886543
No 207
>3n8i_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, hydrolase, protein-ligand complex; HET: NLA; 1.50A {Homo sapiens} SCOP: c.44.1.1 PDB: 5pnt_A* 1xww_A 1bvh_A 1dg9_A* 1phr_A 1pnt_A 1z12_A 1z13_A 1c0e_A 2p4u_A
Probab=43.98 E-value=49 Score=26.63 Aligned_cols=83 Identities=13% Similarity=0.127 Sum_probs=46.7
Q ss_pred CCeeEEEEEeCCc---hHHHHHHHhhh--cCCC-CceEEEE-eeC-C-CCCCChhHHHHHHhCCCCeEEeCCCCCchHHH
Q 024345 127 PKYKVAVLASKQE---HCLVDFLYGWQ--EGKL-PVEITCV-ISN-H-DRGPNSHVIRFLERHGIPYHYLCAKENEREEE 197 (269)
Q Consensus 127 ~~~riav~~Sg~g---~~l~~ll~~~~--~g~l-~~~i~~V-isn-~-~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~ 197 (269)
.++||.|..+|+- .-.+.++...- .|.. ..++.-- +.. + ...++..+.+.++++||++ ...++.-. ++
T Consensus 4 ~~~~vLFVC~gN~cRSpmAE~~~~~~~~~~gl~~~~~v~SAGt~~~~~G~~~~~~a~~~l~~~Gid~-~~~ar~l~-~~- 80 (157)
T 3n8i_A 4 ATKSVLFVCLGNICRSPIAEAVFRKLVTDQNISENWRVDSAATSGYEIGNPPDYRGQSCMKRHGIPM-SHVARQIT-KE- 80 (157)
T ss_dssp CCEEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEESSSTTTTCCCCHHHHHHHHHTTCCC-CCCCCBCC-HH-
T ss_pred CCCEEEEECCCchhHHHHHHHHHHHHHHHcCCCCcEEEEeeecCccccCCCCCHHHHHHHHHcCcCC-CCceeECC-HH-
Confidence 4689999999995 34455554432 2211 1344222 222 1 1125677899999999997 32222111 11
Q ss_pred HHHHhccCCEEEEEecce
Q 024345 198 LLELVQNTDFLVLARYMQ 215 (269)
Q Consensus 198 l~~~l~~~Dlivla~y~~ 215 (269)
.++.+|+|+...-..
T Consensus 81 ---~~~~~DlIi~M~~~n 95 (157)
T 3n8i_A 81 ---DFATFDYILCMDESN 95 (157)
T ss_dssp ---HHHHCSEEEESSHHH
T ss_pred ---HcCCCCEEEEeCcHH
Confidence 223689999976553
No 208
>2wja_A Putative acid phosphatase WZB; hydrolase; 2.50A {Escherichia coli}
Probab=43.92 E-value=43 Score=27.35 Aligned_cols=79 Identities=15% Similarity=0.139 Sum_probs=43.8
Q ss_pred CeeEEEEEeCCc---hHHHHHHHhhhcCCCCceEEEEee--CCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHh
Q 024345 128 KYKVAVLASKQE---HCLVDFLYGWQEGKLPVEITCVIS--NHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELV 202 (269)
Q Consensus 128 ~~riav~~Sg~g---~~l~~ll~~~~~g~l~~~i~~Vis--n~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l 202 (269)
++||.|+.+|+- .-.+.+++..-.+ .++.--=+ .....++..+++.++++||++...-++. -+++ .+
T Consensus 26 m~~VLFVCtgNicRSpmAEal~r~~~~~---~~v~SAGt~~~~g~~~~p~a~~vl~e~Gid~s~~~sr~--l~~~---~~ 97 (168)
T 2wja_A 26 FDSILVICTGNICRSPIGERLLRRLLPS---KKINSAGVGALVDHAADESAIRVAEKNGLCLKGHRGTK--FTSA---LA 97 (168)
T ss_dssp CSEEEEEESSSSSHHHHHHHHHHHHSTT---SEEEEEETTCCTTCCCCHHHHHC---CCCCCTTCCCCB--CCHH---HH
T ss_pred cCEEEEEcCCcHHHHHHHHHHHHHhcCC---eEEEeeecCCCCCCCCCHHHHHHHHHcCCCcccCccCC--CChh---Hh
Confidence 359999999995 4456666654322 44433222 1112256778999999999874222211 1111 23
Q ss_pred ccCCEEEEEecc
Q 024345 203 QNTDFLVLARYM 214 (269)
Q Consensus 203 ~~~Dlivla~y~ 214 (269)
+++|+|+...-.
T Consensus 98 ~~~DlIitM~~~ 109 (168)
T 2wja_A 98 RQYDLLLVMEYS 109 (168)
T ss_dssp TTCSEEEESSHH
T ss_pred ccCCEEEEcCHH
Confidence 479999998654
No 209
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=43.72 E-value=49 Score=29.11 Aligned_cols=51 Identities=14% Similarity=0.154 Sum_probs=31.3
Q ss_pred CeeEEEEEeCC-chH--HHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEe
Q 024345 128 KYKVAVLASKQ-EHC--LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYL 187 (269)
Q Consensus 128 ~~riav~~Sg~-g~~--l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~ 187 (269)
+|||+|++.+. ||. +..|.+.+++- .++|.. ++.. ...+..+..|++++.+
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~--GheV~v-~~~~------~~~~~~~~~g~~~~~~ 54 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQAS--GHEVLI-AAPP------ELQATAHGAGLTTAGI 54 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHT--TCEEEE-EECH------HHHHHHHHBTCEEEEC
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHC--CCEEEE-ecCh------hhHHHHHhCCCceeee
Confidence 47999888665 432 23455544432 267764 4432 2456778899999887
No 210
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=43.12 E-value=1.1e+02 Score=26.34 Aligned_cols=75 Identities=4% Similarity=-0.100 Sum_probs=40.9
Q ss_pred CeeEEEEEeCCc---hHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHh-------CCCCeEEeCCCCCchHHH
Q 024345 128 KYKVAVLASKQE---HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLER-------HGIPYHYLCAKENEREEE 197 (269)
Q Consensus 128 ~~riav~~Sg~g---~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~-------~gIP~~~~~~~~~~~e~~ 197 (269)
++||.|.|...+ +..+.|++ .| ++|.++.-+.+ +.....+.... .++.++..+.. ..+.
T Consensus 25 ~~~vlVtGatG~iG~~l~~~L~~---~g---~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~---d~~~ 93 (351)
T 3ruf_A 25 PKTWLITGVAGFIGSNLLEKLLK---LN---QVVIGLDNFST--GHQYNLDEVKTLVSTEQWSRFCFIEGDIR---DLTT 93 (351)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHH---TT---CEEEEEECCSS--CCHHHHHHHHHTSCHHHHTTEEEEECCTT---CHHH
T ss_pred CCeEEEECCCcHHHHHHHHHHHH---CC---CEEEEEeCCCC--CchhhhhhhhhccccccCCceEEEEccCC---CHHH
Confidence 468888775543 34445554 45 56665544332 12222222222 56777766522 2345
Q ss_pred HHHHhccCCEEEEEec
Q 024345 198 LLELVQNTDFLVLARY 213 (269)
Q Consensus 198 l~~~l~~~Dlivla~y 213 (269)
+.++++++|.||-.+.
T Consensus 94 ~~~~~~~~d~Vih~A~ 109 (351)
T 3ruf_A 94 CEQVMKGVDHVLHQAA 109 (351)
T ss_dssp HHHHTTTCSEEEECCC
T ss_pred HHHHhcCCCEEEECCc
Confidence 6677779999886543
No 211
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=42.80 E-value=1.6e+02 Score=26.48 Aligned_cols=94 Identities=16% Similarity=0.198 Sum_probs=56.2
Q ss_pred CHHHHHHHHHhhhhhhccceeeeeecCCCCCeeEEEEEeCC-chHHHHHHHhhhcCCCCceEEEEeeCCCCC-CChhHHH
Q 024345 98 PREQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRG-PNSHVIR 175 (269)
Q Consensus 98 ~~~~L~e~L~~la~el~l~~~~~~~~~~~~~~riav~~Sg~-g~~l~~ll~~~~~g~l~~~i~~Visn~~~~-~~~~v~~ 175 (269)
.+.+.-.+|..+-+.+|- -...||+++|-+. +.....++..+. .++.++ +++.|+.. ++..+.+
T Consensus 135 HPtQ~LaDl~Ti~e~~g~----------l~gl~va~vGD~~~~rva~Sl~~~~~--~~G~~v--~~~~P~~~~~~~~~~~ 200 (308)
T 1ml4_A 135 HPTQTLLDLYTIKKEFGR----------IDGLKIGLLGDLKYGRTVHSLAEALT--FYDVEL--YLISPELLRMPRHIVE 200 (308)
T ss_dssp CHHHHHHHHHHHHHHSSC----------SSSEEEEEESCTTTCHHHHHHHHHGG--GSCEEE--EEECCGGGCCCHHHHH
T ss_pred CcHHHHHHHHHHHHHhCC----------CCCeEEEEeCCCCcCchHHHHHHHHH--HCCCEE--EEECCccccCCHHHHH
Confidence 444444445555455441 1457999999874 445555555432 233454 45544332 4456888
Q ss_pred HHHhCCCCeEEeCCCCCchHHHHHHHhccCCEEEEEec
Q 024345 176 FLERHGIPYHYLCAKENEREEELLELVQNTDFLVLARY 213 (269)
Q Consensus 176 ~a~~~gIP~~~~~~~~~~~e~~l~~~l~~~Dlivla~y 213 (269)
.|++.|..+.... .+.+.++++|+|.+-+|
T Consensus 201 ~~~~~g~~~~~~~--------d~~eav~~aDvvyt~~~ 230 (308)
T 1ml4_A 201 ELREKGMKVVETT--------TLEDVIGKLDVLYVTRI 230 (308)
T ss_dssp HHHHTTCCEEEES--------CTHHHHTTCSEEEECCC
T ss_pred HHHHcCCeEEEEc--------CHHHHhcCCCEEEECCc
Confidence 9999998876643 12245668999999776
No 212
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=42.35 E-value=35 Score=29.12 Aligned_cols=47 Identities=17% Similarity=0.022 Sum_probs=25.9
Q ss_pred CeeEEEEEeCC-chHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCC
Q 024345 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP 183 (269)
Q Consensus 128 ~~riav~~Sg~-g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP 183 (269)
++||+|+|.|. |..+-..+.. .|. ..+|. +.++ +..-.+.+.+.|+.
T Consensus 1 m~~I~iIG~G~mG~~~a~~l~~--~g~-~~~V~--~~d~----~~~~~~~~~~~g~~ 48 (281)
T 2g5c_A 1 MQNVLIVGVGFMGGSFAKSLRR--SGF-KGKIY--GYDI----NPESISKAVDLGII 48 (281)
T ss_dssp CCEEEEESCSHHHHHHHHHHHH--TTC-CSEEE--EECS----CHHHHHHHHHTTSC
T ss_pred CcEEEEEecCHHHHHHHHHHHh--cCC-CcEEE--EEeC----CHHHHHHHHHCCCc
Confidence 36899999988 5554333332 342 22443 4454 22334556677874
No 213
>3o85_A Ribosomal protein L7AE; alpha beta sandwich fold, K-turn RNA binding protein, KINK T ribosomal protein; 1.81A {Giardia lamblia}
Probab=42.06 E-value=37 Score=26.38 Aligned_cols=49 Identities=20% Similarity=0.335 Sum_probs=30.3
Q ss_pred EEeCCchHHHHHHHhhhcCCCCceEEEEeeCCCCCC-ChhHHHHHHhCCCCeEEeC
Q 024345 134 LASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGP-NSHVIRFLERHGIPYHYLC 188 (269)
Q Consensus 134 ~~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~-~~~v~~~a~~~gIP~~~~~ 188 (269)
+.+|...... .++.|+ +.++.+-.|-+... ..++..+|+++|||++++.
T Consensus 32 lv~G~~~v~k----ai~~gk--a~lViiA~D~~p~~~~~~l~~lc~~~~VP~~~v~ 81 (122)
T 3o85_A 32 IKRGANEALK----QVNRGK--AELVIIAADADPIEIVLHLPLACEDKGVPYVFIG 81 (122)
T ss_dssp EEESHHHHHH----HHHTTC--CSEEEEETTCSSGGGGTTHHHHHHTTTCCEEEES
T ss_pred EeEcHHHHHH----HHHcCC--ceEEEEeCCCChHHHHHHHHHHHHHhCCCEEEEC
Confidence 4555444443 344564 56665666553211 2568889999999998875
No 214
>3v7q_A Probable ribosomal protein YLXQ; L7AE superfamily, K-turn binding, K-turn RNA, hypothetical R protein, RNA binding protein; HET: CIT; 1.55A {Bacillus subtilis}
Probab=41.42 E-value=21 Score=26.71 Aligned_cols=49 Identities=8% Similarity=0.199 Sum_probs=29.3
Q ss_pred EEeCCchHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeC
Q 024345 134 LASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (269)
Q Consensus 134 ~~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~ 188 (269)
+.+|....+.+ ++.|+ +.++.+-.|-+..-..++..+|+.++||++.+.
T Consensus 20 ~v~G~~~v~ka----i~~gk--a~lViiA~D~~~~~~~~i~~~c~~~~vp~~~~~ 68 (101)
T 3v7q_A 20 VVSGEDLVIKE----IRNAR--AKLVLLTEDASSNTAKKVTDKCNYYKVPYKKVE 68 (101)
T ss_dssp EEESHHHHHHH----HHTTC--CSEEEEETTSCHHHHHHHHHHHHHTTCCEEEES
T ss_pred cccchhhhHHH----HhcCc--eeEEEEeccccccchhhhcccccccCCCeeeec
Confidence 44554445443 34564 556655555421111457788999999999875
No 215
>3au8_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH binding; HET: NDP; 1.86A {Plasmodium falciparum} PDB: 3au9_A* 3aua_A*
Probab=41.28 E-value=89 Score=30.20 Aligned_cols=60 Identities=10% Similarity=0.107 Sum_probs=39.1
Q ss_pred CCCCeeEEEEEeCC--chHHHHHHHhhh-cCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeC
Q 024345 125 IDPKYKVAVLASKQ--EHCLVDFLYGWQ-EGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (269)
Q Consensus 125 ~~~~~riav~~Sg~--g~~l~~ll~~~~-~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~ 188 (269)
...|+||++|||.. |.+-.+++.+.. .++ .++|+++..++ .-....+-|++++-.+..+.
T Consensus 74 ~~~mk~I~ILGSTGSIGtqTLdVi~~~p~~pd-~f~V~aLaAg~---Nv~lL~eQ~~ef~P~~v~v~ 136 (488)
T 3au8_A 74 IKKPINVAIFGSTGSIGTNALNIIRECNKIEN-VFNVKALYVNK---SVNELYEQAREFLPEYLCIH 136 (488)
T ss_dssp ---CEEEEEETTTSHHHHHHHHHHHHHHHHSC-CEEEEEEEESS---CHHHHHHHHHHHCCSEEEES
T ss_pred hhcceEEEEEccCcHHHHHHHHHHHcccCCCC-eEEEEEEEcCC---CHHHHHHHHHHcCCCEEEEc
Confidence 34568999999987 454456666531 111 37899888865 23457788889997777664
No 216
>3jyw_G 60S ribosomal protein L8(A); eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus} PDB: 1s1i_G
Probab=41.14 E-value=35 Score=26.43 Aligned_cols=42 Identities=17% Similarity=0.324 Sum_probs=27.5
Q ss_pred HHHhhhcCCCCceEEEEeeCCCCCCC---hhHHHHHHhCCCCeEEeCCC
Q 024345 145 FLYGWQEGKLPVEITCVISNHDRGPN---SHVIRFLERHGIPYHYLCAK 190 (269)
Q Consensus 145 ll~~~~~g~l~~~i~~Visn~~~~~~---~~v~~~a~~~gIP~~~~~~~ 190 (269)
....+++|+ +.++.+-.|-+ |. .++..+|+++||||++++.+
T Consensus 33 v~kaI~~gk--a~LVvIA~D~~--p~~i~~~l~~lC~~~~VP~~~v~sk 77 (113)
T 3jyw_G 33 VVALIENKK--AKLVLIANDVD--PIELVVFLPALCKKMGVPYAIVKGK 77 (113)
T ss_dssp HHHTTTTTC--CSEEEECSCCS--SHHHHTTHHHHHHHTTCCCEECSCS
T ss_pred HHHHHHcCC--ceEEEEeCCCC--HHHHHHHHHHHHHHcCCCEEEECCH
Confidence 344555674 56665555542 32 35778999999999998743
No 217
>3iz5_f 60S ribosomal protein L30 (L30E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_f
Probab=41.01 E-value=21 Score=27.51 Aligned_cols=49 Identities=10% Similarity=0.029 Sum_probs=29.9
Q ss_pred EEeCCchHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeC
Q 024345 134 LASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (269)
Q Consensus 134 ~~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~ 188 (269)
+.+|....+.+ ++.|+ +.++.+-.|-+..-..++..+|..++||+++++
T Consensus 27 ~~~G~~~t~ka----i~~gk--akLVilA~D~~~~~~~~i~~~c~~~~ipv~~~~ 75 (112)
T 3iz5_f 27 YTLGYKTVLKT----LRSSL--GKLIILANNCPPLRKSEIETYAMLAKISVHHFH 75 (112)
T ss_dssp EEESHHHHHHH----HHTTC--CSEEEECSCCCHHHHHHHHHHHHHTTCCEECCC
T ss_pred eeECHHHHHHH----HHcCC--ceEEEEeCCCCHHHHHHHHHHHHHcCCcEEEeC
Confidence 45555455544 34564 566655555421111457888999999999983
No 218
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis}
Probab=40.92 E-value=92 Score=26.53 Aligned_cols=41 Identities=17% Similarity=0.246 Sum_probs=27.1
Q ss_pred HHHHHHhCCCCe--EEeCCCCCchHHHHHHHhc--cCCEEEEEecce
Q 024345 173 VIRFLERHGIPY--HYLCAKENEREEELLELVQ--NTDFLVLARYMQ 215 (269)
Q Consensus 173 v~~~a~~~gIP~--~~~~~~~~~~e~~l~~~l~--~~Dlivla~y~~ 215 (269)
+.++++++|++. ..+. .....+.+.+..+ ++|+||+..+++
T Consensus 233 l~~~~~~~~~~~~~~~v~--~g~~~~~I~~~a~~~~~dLiV~G~~g~ 277 (319)
T 3olq_A 233 MKELRQKFSIPEEKTHVK--EGLPEQVIPQVCEELNAGIVVLGILGR 277 (319)
T ss_dssp HHHHHHHTTCCGGGEEEE--ESCHHHHHHHHHHHTTEEEEEEECCSC
T ss_pred HHHHHHHhCCCcccEEEe--cCCcHHHHHHHHHHhCCCEEEEeccCc
Confidence 456678999862 1111 1233567777776 899999998864
No 219
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=40.87 E-value=48 Score=29.30 Aligned_cols=33 Identities=3% Similarity=-0.095 Sum_probs=19.8
Q ss_pred CCeeEEEEEeC-C-ch-HHHHHHHhhhcCCCCceEEEEeeCC
Q 024345 127 PKYKVAVLASK-Q-EH-CLVDFLYGWQEGKLPVEITCVISNH 165 (269)
Q Consensus 127 ~~~riav~~Sg-~-g~-~l~~ll~~~~~g~l~~~i~~Visn~ 165 (269)
+|+||+++|.| . +. -+.++.. . +.++++|+...
T Consensus 2 ~mirvgiIG~gG~i~~~h~~~l~~----~--~~~lvav~d~~ 37 (318)
T 3oa2_A 2 HMKNFALIGAAGYIAPRHMRAIKD----T--GNCLVSAYDIN 37 (318)
T ss_dssp -CCEEEEETTTSSSHHHHHHHHHH----T--TCEEEEEECSS
T ss_pred CceEEEEECCCcHHHHHHHHHHHh----C--CCEEEEEEcCC
Confidence 57899999994 3 33 3333322 2 36888877544
No 220
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=40.84 E-value=26 Score=30.05 Aligned_cols=17 Identities=6% Similarity=-0.033 Sum_probs=12.1
Q ss_pred CeeEEEEEeCC-chHHHH
Q 024345 128 KYKVAVLASKQ-EHCLVD 144 (269)
Q Consensus 128 ~~riav~~Sg~-g~~l~~ 144 (269)
+|||+|+|.|. |..+-.
T Consensus 3 ~m~i~iiG~G~~G~~~a~ 20 (295)
T 1yb4_A 3 AMKLGFIGLGIMGSPMAI 20 (295)
T ss_dssp -CEEEECCCSTTHHHHHH
T ss_pred CCEEEEEccCHHHHHHHH
Confidence 47999999998 554433
No 221
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=40.34 E-value=83 Score=29.06 Aligned_cols=73 Identities=16% Similarity=0.212 Sum_probs=37.7
Q ss_pred CCeeEEEEEeCC-ch-HHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHH---hCCCC-eEEeCCCCCchHHHHHH
Q 024345 127 PKYKVAVLASKQ-EH-CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLE---RHGIP-YHYLCAKENEREEELLE 200 (269)
Q Consensus 127 ~~~riav~~Sg~-g~-~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~---~~gIP-~~~~~~~~~~~e~~l~~ 200 (269)
+++||+|+|.|. |. -+..+.. .+ .+++++|.... ...+.++++ ++|+| ....... +..+.+
T Consensus 19 ~~~rvgiIG~G~~g~~h~~~l~~---~~--~~~lvav~d~~----~~~~~~~a~~~~~~g~~~~~~~~~~----~~~~~~ 85 (444)
T 2ixa_A 19 KKVRIAFIAVGLRGQTHVENMAR---RD--DVEIVAFADPD----PYMVGRAQEILKKNGKKPAKVFGNG----NDDYKN 85 (444)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHT---CT--TEEEEEEECSC----HHHHHHHHHHHHHTTCCCCEEECSS----TTTHHH
T ss_pred CCceEEEEecCHHHHHHHHHHHh---CC--CcEEEEEEeCC----HHHHHHHHHHHHhcCCCCCceeccC----CCCHHH
Confidence 468999999986 22 2233221 12 36787766533 223444444 57875 2222200 012334
Q ss_pred Hhc--cCCEEEEEe
Q 024345 201 LVQ--NTDFLVLAR 212 (269)
Q Consensus 201 ~l~--~~Dlivla~ 212 (269)
+++ ++|+|+.+-
T Consensus 86 ll~~~~vD~V~i~t 99 (444)
T 2ixa_A 86 MLKDKNIDAVFVSS 99 (444)
T ss_dssp HTTCTTCCEEEECC
T ss_pred HhcCCCCCEEEEcC
Confidence 555 578777764
No 222
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=39.81 E-value=92 Score=28.82 Aligned_cols=32 Identities=6% Similarity=0.045 Sum_probs=21.1
Q ss_pred HHHHhCCCCeEEeCCCCCchHHHHHHHhccCCEEEEEecc
Q 024345 175 RFLERHGIPYHYLCAKENEREEELLELVQNTDFLVLARYM 214 (269)
Q Consensus 175 ~~a~~~gIP~~~~~~~~~~~e~~l~~~l~~~Dlivla~y~ 214 (269)
++|++.|..+.... ++.+.++++|+|.+-.|-
T Consensus 244 ~~a~~~g~~v~~~~--------d~~eav~~aDvVyt~~w~ 275 (359)
T 1zq6_A 244 QNVAESGGSLQVSH--------DIDSAYAGADVVYAKSWG 275 (359)
T ss_dssp HHHHHHSCEEEEEC--------CHHHHHTTCSEEEEECCC
T ss_pred HHHHHcCCeEEEEC--------CHHHHhcCCCEEEECCcc
Confidence 34457777766543 133566799999998873
No 223
>3lm8_A Thiamine pyrophosphokinase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: VIB; 2.60A {Bacillus subtilis}
Probab=39.79 E-value=26 Score=30.06 Aligned_cols=55 Identities=13% Similarity=0.120 Sum_probs=34.5
Q ss_pred EEEEeeCCCCCCChhHHHHHHhCCCCeEEeC-CCC-CchHHHHHHHhc-cCCEEEEEec
Q 024345 158 ITCVISNHDRGPNSHVIRFLERHGIPYHYLC-AKE-NEREEELLELVQ-NTDFLVLARY 213 (269)
Q Consensus 158 i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~-~~~-~~~e~~l~~~l~-~~Dlivla~y 213 (269)
.-.+|.+-|. -+..++++.++.|+++..++ .|+ ++.|.++..+++ +++-|++.|.
T Consensus 45 Pd~ivGDfDS-i~~~~~~~~~~~~~~i~~~p~eKD~TD~e~Al~~a~~~g~~~I~i~Ga 102 (222)
T 3lm8_A 45 PVEAFGDFDS-ITEQERRRIEKAAPALHVYQAEKDQTDLDLALDWALEKQPDIIQIFGI 102 (222)
T ss_dssp CSEEESCSTT-SCHHHHHHHHHHCTTCEEECCCSSSCHHHHHHHHHHHHCCSEEEEESC
T ss_pred CcEEEeCccc-CCHHHHHHHHhcCCeEEEeCCCCCCCHHHHHHHHHHHcCCCEEEEEcC
Confidence 3457777765 34567888888999999987 443 333444544455 6665555443
No 224
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=39.53 E-value=52 Score=28.15 Aligned_cols=64 Identities=13% Similarity=0.168 Sum_probs=32.4
Q ss_pred eeEEEEEeCC-chHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhccCCE
Q 024345 129 YKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTDF 207 (269)
Q Consensus 129 ~riav~~Sg~-g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~~~Dl 207 (269)
|||+|+|.|. |..+-..+.. .| ++| .+.+++ ...+ +.+.+.|+.+. . +.+ +.++++|+
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~--~g---~~V--~~~~~~---~~~~-~~~~~~g~~~~--~----~~~----~~~~~~D~ 64 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLK--AG---YSL--VVSDRN---PEAI-ADVIAAGAETA--S----TAK----AIAEQCDV 64 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHH--TT---CEE--EEECSC---HHHH-HHHHHTTCEEC--S----SHH----HHHHHCSE
T ss_pred ceEEEECchHHHHHHHHHHHh--CC---CEE--EEEeCC---HHHH-HHHHHCCCeec--C----CHH----HHHhCCCE
Confidence 6999999998 4444333332 34 455 344542 1223 33444565321 1 111 23346788
Q ss_pred EEEEec
Q 024345 208 LVLARY 213 (269)
Q Consensus 208 ivla~y 213 (269)
|+++--
T Consensus 65 vi~~v~ 70 (299)
T 1vpd_A 65 IITMLP 70 (299)
T ss_dssp EEECCS
T ss_pred EEEECC
Confidence 777653
No 225
>3on1_A BH2414 protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, unknown function; HET: MSE; 1.65A {Bacillus halodurans}
Probab=39.51 E-value=18 Score=26.96 Aligned_cols=49 Identities=16% Similarity=0.207 Sum_probs=28.8
Q ss_pred EEeCCchHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeC
Q 024345 134 LASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (269)
Q Consensus 134 ~~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~ 188 (269)
+.+|....+.+ ++.|+ +.++.+-.|-+..-..++..+|+.++||++++.
T Consensus 19 ~v~G~~~v~ka----i~~gk--a~lViiA~D~~~~~~~~i~~~c~~~~ip~~~~~ 67 (101)
T 3on1_A 19 LLTGEEQVVKA----VQNGQ--VTLVILSSDAGIHTKKKLLDKCGSYQIPVKVVG 67 (101)
T ss_dssp EEESHHHHHHH----HHTTC--CSEEEEETTSCHHHHHHHHHHHHHHTCCEEEES
T ss_pred EeECHHHHHHH----HHcCC--CcEEEEeCCCCHHHHHHHHHHHHHcCCCEEEeC
Confidence 44454444443 34564 556555555421111357788999999999875
No 226
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=39.39 E-value=1.1e+02 Score=27.19 Aligned_cols=52 Identities=10% Similarity=0.028 Sum_probs=31.3
Q ss_pred CeeEEEEEeCC-ch--HHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeC
Q 024345 128 KYKVAVLASKQ-EH--CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (269)
Q Consensus 128 ~~riav~~Sg~-g~--~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~ 188 (269)
++||+++..+. || .+..|.+..++. .++|..+.+.. ..+..++.|++++.++
T Consensus 7 m~kIl~~~~~~~Gh~~p~~~la~~L~~~--G~~V~~~~~~~-------~~~~~~~~g~~~~~~~ 61 (430)
T 2iyf_A 7 PAHIAMFSIAAHGHVNPSLEVIRELVAR--GHRVTYAIPPV-------FADKVAATGPRPVLYH 61 (430)
T ss_dssp -CEEEEECCSCHHHHGGGHHHHHHHHHT--TCEEEEEECGG-------GHHHHHTTSCEEEECC
T ss_pred cceEEEEeCCCCccccchHHHHHHHHHC--CCeEEEEeCHH-------HHHHHHhCCCEEEEcC
Confidence 47999987655 43 245565554432 26776554332 2455677899888776
No 227
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=39.24 E-value=69 Score=28.71 Aligned_cols=50 Identities=16% Similarity=0.107 Sum_probs=31.0
Q ss_pred CeeEEEEEeCC-chHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeE
Q 024345 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYH 185 (269)
Q Consensus 128 ~~riav~~Sg~-g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~ 185 (269)
++||+|.|.|. |..+-..+.. .+ ..++++|.... ......+++++|++++
T Consensus 2 ~irVgIiG~G~iG~~~~r~l~~--~~--~~elvav~d~~----~~~~~~~~~~~g~~~~ 52 (334)
T 2czc_A 2 KVKVGVNGYGTIGKRVAYAVTK--QD--DMELIGITKTK----PDFEAYRAKELGIPVY 52 (334)
T ss_dssp CEEEEEECCSHHHHHHHHHHHT--CT--TEEEEEEEESS----CSHHHHHHHHTTCCEE
T ss_pred CcEEEEEeEhHHHHHHHHHHhc--CC--CCEEEEEEcCC----HHHHHHHHHhcCcccc
Confidence 47999999866 3333333321 12 36888776543 2345678888888865
No 228
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=39.21 E-value=1.5e+02 Score=26.69 Aligned_cols=51 Identities=16% Similarity=0.092 Sum_probs=31.1
Q ss_pred CeeEEEEEeCC-chHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEE
Q 024345 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHY 186 (269)
Q Consensus 128 ~~riav~~Sg~-g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~ 186 (269)
|+||||.|.|. |..+..++.. .+ ..++++|.. + ........+.+.|+|++.
T Consensus 1 ~ikVgIiGaG~iG~~~~r~L~~--~p--~~elvav~d-~---~~~~~~~~a~~~g~~~~~ 52 (340)
T 1b7g_O 1 MVNVAVNGYGTIGKRVADAIIK--QP--DMKLVGVAK-T---SPNYEAFIAHRRGIRIYV 52 (340)
T ss_dssp CEEEEEECCSHHHHHHHHHHHT--CT--TEEEEEEEC-S---SCSHHHHHHHHTTCCEEC
T ss_pred CeEEEEEecCHHHHHHHHHHHc--CC--CCEEEEEEc-C---ChHHHHHHHHhcCcceec
Confidence 47999999966 4444343431 22 368877654 3 123455777788998763
No 229
>3p52_A NH(3)-dependent NAD(+) synthetase; structural genomics, center for structural genomics of infec diseases, NADE, CSGI; 2.74A {Campylobacter jejuni} SCOP: c.26.2.0
Probab=38.70 E-value=1.2e+02 Score=26.03 Aligned_cols=80 Identities=6% Similarity=0.005 Sum_probs=47.8
Q ss_pred CCHHHHHHHHHhhhhhhccceeeeeecCCCCCeeEEEEEeCCc-h-HHHHHHHhhhcCCCCceEEEEeeCCCCCCC---h
Q 024345 97 WPREQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQE-H-CLVDFLYGWQEGKLPVEITCVISNHDRGPN---S 171 (269)
Q Consensus 97 ~~~~~L~e~L~~la~el~l~~~~~~~~~~~~~~riav~~Sg~g-~-~l~~ll~~~~~g~l~~~i~~Visn~~~~~~---~ 171 (269)
.+.+++.+++...-.+.= . .....|+++..||.- | .+-.++... -| .++.+|..+..-.+. .
T Consensus 4 ~~~~~~~~~l~~~l~d~v--------~-~~g~~~vvv~lSGGiDSsv~a~l~~~~-~g---~~v~av~~~~~~~~~~~~~ 70 (249)
T 3p52_A 4 MDWQKITEKMCDFIQEKV--------K-NSQSQGVVLGLSGGIDSALVATLCKRA-LK---ENVFALLMPTQISNKANLE 70 (249)
T ss_dssp CCHHHHHHHHHHHHHHHH--------H-TSSCSEEEEECCSSHHHHHHHHHHHHH-HT---TSEEEEECCSCCSSCHHHH
T ss_pred cCHHHHHHHHHHHHHHHH--------H-HhCCCCEEEEcCCCHHHHHHHHHHHHH-cC---CcEEEEEecCCCCCHHHHH
Confidence 355666666555444331 0 123468999999974 4 333444321 24 567777776531111 3
Q ss_pred hHHHHHHhCCCCeEEeCC
Q 024345 172 HVIRFLERHGIPYHYLCA 189 (269)
Q Consensus 172 ~v~~~a~~~gIP~~~~~~ 189 (269)
.+.++|++.|||++.++.
T Consensus 71 ~a~~~a~~lgi~~~~v~i 88 (249)
T 3p52_A 71 DALRLCADLNLEYKIIEI 88 (249)
T ss_dssp HHHHHHHHHTCEEEECCC
T ss_pred HHHHHHHHhCCCEEEEEC
Confidence 578899999999998873
No 230
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=38.29 E-value=2.3e+02 Score=26.14 Aligned_cols=79 Identities=11% Similarity=0.093 Sum_probs=45.5
Q ss_pred CCCCeeEEEEEeCCc-----hHHHHHHHh--hhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHH
Q 024345 125 IDPKYKVAVLASKQE-----HCLVDFLYG--WQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEE 197 (269)
Q Consensus 125 ~~~~~riav~~Sg~g-----~~l~~ll~~--~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~ 197 (269)
..+++||+++.+.-. ..+..+++. .... .+++.++....+ ......+..+..+ ++..+.. ....+
T Consensus 202 ~~~~~rI~~~~~~~~~~g~~~~~~~l~~~L~~~~~--~~~v~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~---~~~~~ 273 (568)
T 2vsy_A 202 SKGPLRVGFVSNGFGAHPTGLLTVALFEALQRRQP--DLQMHLFATSGD--DGSTLRTRLAQAS-TLHDVTA---LGHLA 273 (568)
T ss_dssp SSSCEEEEEEESCSSSSHHHHHHHHHHHHHHHHCT--TEEEEEEESSCC--CSCHHHHHHHHTS-EEEECTT---CCHHH
T ss_pred CCCCeEEEEECcccccChHHHHHHHHHhhccCCcc--cEEEEEEECCCC--CccHHHHHHHhcC-eEEECCC---CCHHH
Confidence 467799999987642 445566665 3332 367765544331 1233445556666 5444331 12345
Q ss_pred HHHHhc--cCCEEEEE
Q 024345 198 LLELVQ--NTDFLVLA 211 (269)
Q Consensus 198 l~~~l~--~~Dlivla 211 (269)
+.+.++ ++|+|+..
T Consensus 274 l~~~i~~~~~Div~~~ 289 (568)
T 2vsy_A 274 TAKHIRHHGIDLLFDL 289 (568)
T ss_dssp HHHHHHHTTCSEEEEC
T ss_pred HHHHHHhCCCCEEEEC
Confidence 667776 89999864
No 231
>4egs_A Ribose 5-phosphate isomerase RPIB; tyrosine phosphatase, dephosphorylation, hydrolase; 2.30A {Thermoanaerobacter tengcongensis}
Probab=38.22 E-value=46 Score=27.40 Aligned_cols=84 Identities=12% Similarity=0.080 Sum_probs=41.8
Q ss_pred CCCCeeEEEEEeCCc---hHHHHHHHhhhcC-CCCceEEEEee-CCCC-CCChhHHH-HHHhCCCCeEEeCCCCCchHHH
Q 024345 125 IDPKYKVAVLASKQE---HCLVDFLYGWQEG-KLPVEITCVIS-NHDR-GPNSHVIR-FLERHGIPYHYLCAKENEREEE 197 (269)
Q Consensus 125 ~~~~~riav~~Sg~g---~~l~~ll~~~~~g-~l~~~i~~Vis-n~~~-~~~~~v~~-~a~~~gIP~~~~~~~~~~~e~~ 197 (269)
...++||.|+.+|+- .-.+.+++...++ ....++.--=+ ..+. .++....+ .++++||++.-.-.+.-. ++
T Consensus 31 ~~~~mkVLFVC~GNiCRSpmAE~l~r~~~~~~g~~~~v~SAGt~~~~g~~~~~~a~~~l~~e~Gidis~h~sr~l~-~~- 108 (180)
T 4egs_A 31 GRGSMRVLFVCTGNTCRSPMAEGIFNAKSKALGKDWEAKSAGVFAPEGFPASSEAVEVLKKEYGIDISDHRAKSLR-EE- 108 (180)
T ss_dssp ---CCEEEEEESSSSSHHHHHHHHHHHHHHHTTCCCEEEEEETTCCTTCCCCHHHHHHHHHHHCCCCTTCCCCBCC-SH-
T ss_pred CCCCeEEEEEeCCCcccCHHHHHHHHHHHHhcCCceEEEEeeecCcCCCCCChHHHHHHHHHcCcCcccCcccccC-hh-
Confidence 346799999999995 3445565543221 12344433322 1111 12333444 457899987432222111 11
Q ss_pred HHHHhccCCEEEEEec
Q 024345 198 LLELVQNTDFLVLARY 213 (269)
Q Consensus 198 l~~~l~~~Dlivla~y 213 (269)
.++++|+|+...-
T Consensus 109 ---d~~~~DlIi~Md~ 121 (180)
T 4egs_A 109 ---DLKGADLVLAMAF 121 (180)
T ss_dssp ---HHHHCSEEEESSH
T ss_pred ---hCcCCCEEEEcCH
Confidence 1236899998764
No 232
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=38.19 E-value=52 Score=26.53 Aligned_cols=70 Identities=16% Similarity=0.183 Sum_probs=34.1
Q ss_pred CCeeEEEEEeCCc--h-HHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhc
Q 024345 127 PKYKVAVLASKQE--H-CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 203 (269)
Q Consensus 127 ~~~riav~~Sg~g--~-~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~ 203 (269)
.++||.|.|...+ . ..+.|++ .| ++|.++.-+.++.+.. ..++.++..|- ...+++.++++
T Consensus 3 ~m~~ilItGatG~iG~~l~~~L~~---~g---~~V~~~~r~~~~~~~~-------~~~~~~~~~Dl---~d~~~~~~~~~ 66 (227)
T 3dhn_A 3 KVKKIVLIGASGFVGSALLNEALN---RG---FEVTAVVRHPEKIKIE-------NEHLKVKKADV---SSLDEVCEVCK 66 (227)
T ss_dssp CCCEEEEETCCHHHHHHHHHHHHT---TT---CEEEEECSCGGGCCCC-------CTTEEEECCCT---TCHHHHHHHHT
T ss_pred CCCEEEEEcCCchHHHHHHHHHHH---CC---CEEEEEEcCcccchhc-------cCceEEEEecC---CCHHHHHHHhc
Confidence 3578877775443 3 3344443 34 5666554433211100 13444444332 12345666666
Q ss_pred cCCEEEEEe
Q 024345 204 NTDFLVLAR 212 (269)
Q Consensus 204 ~~Dlivla~ 212 (269)
++|.+|.+.
T Consensus 67 ~~d~vi~~a 75 (227)
T 3dhn_A 67 GADAVISAF 75 (227)
T ss_dssp TCSEEEECC
T ss_pred CCCEEEEeC
Confidence 788777553
No 233
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=38.11 E-value=57 Score=26.34 Aligned_cols=74 Identities=11% Similarity=0.123 Sum_probs=36.2
Q ss_pred CCee-EEEEEeCCc---hHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHH-HhCCCCeEEeCCCCCchHHHHHHH
Q 024345 127 PKYK-VAVLASKQE---HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFL-ERHGIPYHYLCAKENEREEELLEL 201 (269)
Q Consensus 127 ~~~r-iav~~Sg~g---~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a-~~~gIP~~~~~~~~~~~e~~l~~~ 201 (269)
+|+| |.|.|...+ ...+.|++. .| ++|.++.-+.+ ....+++ ...++.++..|. ..++++.+.
T Consensus 3 ~mmk~vlVtGasg~iG~~~~~~l~~~--~g---~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~D~---~d~~~~~~~ 70 (221)
T 3r6d_A 3 AMYXYITILGAAGQIAQXLTATLLTY--TD---MHITLYGRQLK----TRIPPEIIDHERVTVIEGSF---QNPGXLEQA 70 (221)
T ss_dssp CSCSEEEEESTTSHHHHHHHHHHHHH--CC---CEEEEEESSHH----HHSCHHHHTSTTEEEEECCT---TCHHHHHHH
T ss_pred ceEEEEEEEeCCcHHHHHHHHHHHhc--CC---ceEEEEecCcc----ccchhhccCCCceEEEECCC---CCHHHHHHH
Confidence 3445 777775443 334444411 44 56654433221 0222332 233444444442 124567777
Q ss_pred hccCCEEEEEe
Q 024345 202 VQNTDFLVLAR 212 (269)
Q Consensus 202 l~~~Dlivla~ 212 (269)
++++|.+|.+.
T Consensus 71 ~~~~d~vv~~a 81 (221)
T 3r6d_A 71 VTNAEVVFVGA 81 (221)
T ss_dssp HTTCSEEEESC
T ss_pred HcCCCEEEEcC
Confidence 77999988644
No 234
>3by5_A Cobalamin biosynthesis protein; structural genomics, unknown function; 2.52A {Agrobacterium tumefaciens str} SCOP: c.151.1.1
Probab=38.01 E-value=86 Score=25.52 Aligned_cols=60 Identities=3% Similarity=0.005 Sum_probs=34.6
Q ss_pred CCeeEEEEEeCCchHHHHH---HH-hhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeC
Q 024345 127 PKYKVAVLASKQEHCLVDF---LY-GWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (269)
Q Consensus 127 ~~~riav~~Sg~g~~l~~l---l~-~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~ 188 (269)
.++=++-+|..+|...+.| ++ .+++-.+. |.++.|-..+.....+.++|+++|+|+..++
T Consensus 8 ~~~lvvGIGcrrg~~~~~i~~ai~~aL~~~gl~--v~~lATid~K~dE~gL~e~A~~lgvPl~~~~ 71 (155)
T 3by5_A 8 AMVTVAGIGCRKGAASDAIIAAVRAAERAFGVT--VDYLATAPLKADEAGLAEAAKGLSLSLEIVA 71 (155)
T ss_dssp --CEEEEEEECSSCCHHHHHHHHHHHHHHHTCC--CCEEEESSCCSCCHHHHHHHHHTTCCEEECC
T ss_pred CCEEEEEEccCCCCCHHHHHHHHHHHHHHCCCC--eEEEEchhhhCCCHHHHHHHHHhCCCeEEEC
Confidence 3445555666666333333 32 22233333 5566554333334679999999999999986
No 235
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=38.01 E-value=56 Score=27.99 Aligned_cols=17 Identities=6% Similarity=0.104 Sum_probs=12.2
Q ss_pred CCeeEEEEEeCC-chHHH
Q 024345 127 PKYKVAVLASKQ-EHCLV 143 (269)
Q Consensus 127 ~~~riav~~Sg~-g~~l~ 143 (269)
+++||+|+|.|. |..+-
T Consensus 3 ~~~~i~iiG~G~~G~~~a 20 (301)
T 3cky_A 3 KSIKIGFIGLGAMGKPMA 20 (301)
T ss_dssp -CCEEEEECCCTTHHHHH
T ss_pred CCCEEEEECccHHHHHHH
Confidence 457999999998 44443
No 236
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=37.97 E-value=1.3e+02 Score=26.80 Aligned_cols=53 Identities=6% Similarity=0.023 Sum_probs=32.1
Q ss_pred CCeeEEEEEeCC-ch--HHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeC
Q 024345 127 PKYKVAVLASKQ-EH--CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (269)
Q Consensus 127 ~~~riav~~Sg~-g~--~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~ 188 (269)
+++||+++..+. || -+..|.+..++- .++|..+.+.. ..+..++.|++++.++
T Consensus 11 ~~~~Il~~~~~~~GHv~p~l~la~~L~~~--Gh~V~~~~~~~-------~~~~~~~~g~~~~~~~ 66 (424)
T 2iya_A 11 TPRHISFFNIPGHGHVNPSLGIVQELVAR--GHRVSYAITDE-------FAAQVKAAGATPVVYD 66 (424)
T ss_dssp CCCEEEEECCSCHHHHHHHHHHHHHHHHT--TCEEEEEECGG-------GHHHHHHHTCEEEECC
T ss_pred ccceEEEEeCCCCcccchHHHHHHHHHHC--CCeEEEEeCHH-------HHHHHHhCCCEEEecC
Confidence 457999987655 43 344555555432 26777554432 2456667798888765
No 237
>1w2i_A Acylphosphatase; hydrolase, thermophilic, stability, amyloid; 1.5A {Pyrococcus horikoshii} SCOP: d.58.10.1 PDB: 1v3z_A 2w4d_A
Probab=37.50 E-value=84 Score=22.93 Aligned_cols=57 Identities=12% Similarity=0.017 Sum_probs=42.2
Q ss_pred HHHHHHHhhhhhhccceeeeeecCCCCCeeEEEEEeCCchHHHHHHHhhhcCCCCceEEEE
Q 024345 101 QMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCV 161 (269)
Q Consensus 101 ~L~e~L~~la~el~l~~~~~~~~~~~~~~riav~~Sg~g~~l~~ll~~~~~g~l~~~i~~V 161 (269)
-+|.-...+|.++++.=|+.. ..+. +|-+.+.|+...+.++++.+++|.-.+.|.-|
T Consensus 18 GFR~~v~~~A~~lgL~G~V~N--~~dG--~Vei~~~G~~~~v~~f~~~l~~gP~~a~V~~v 74 (91)
T 1w2i_A 18 GFRWSMQREARKLGVNGWVRN--LPDG--SVEAVLEGDEERVEALIGWAHQGPPLARVTRV 74 (91)
T ss_dssp SHHHHHHHHHHHHTCEEEEEE--CTTS--CEEEEEEEEHHHHHHHHHHTTTCSTTCEEEEE
T ss_pred CHHHHHHHHHHHcCCeEEEEE--CCCC--CEEEEEEeCHHHHHHHHHHHHhCCCCcEEEEE
Confidence 478888899999999776542 2233 67788888888899999988877544677665
No 238
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=37.40 E-value=40 Score=29.40 Aligned_cols=47 Identities=11% Similarity=0.028 Sum_probs=26.2
Q ss_pred CCeeEEEEEeCC-chHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCe
Q 024345 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPY 184 (269)
Q Consensus 127 ~~~riav~~Sg~-g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~ 184 (269)
.++||+|+|.|. |..+-..+.. .| ++|. +.++ +....+.+.+.|+..
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~--~G---~~V~--~~dr----~~~~~~~~~~~g~~~ 53 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLR--AG---LSTW--GADL----NPQACANLLAEGACG 53 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHH--TT---CEEE--EECS----CHHHHHHHHHTTCSE
T ss_pred CCCeEEEECCCHHHHHHHHHHHH--CC---CeEE--EEEC----CHHHHHHHHHcCCcc
Confidence 568999999998 5554333332 35 4543 4455 222344455667765
No 239
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=37.19 E-value=86 Score=26.36 Aligned_cols=72 Identities=10% Similarity=0.135 Sum_probs=38.6
Q ss_pred HHHHHHHHHhhhhhhccceeeeeecCCCCCeeEEEEEeCCchHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHH
Q 024345 99 REQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLE 178 (269)
Q Consensus 99 ~~~L~e~L~~la~el~l~~~~~~~~~~~~~~riav~~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~ 178 (269)
..++.+.+++.+++.|. ++.++.+.+......+++.+.... +-++|..... .+....+.+.
T Consensus 25 ~~~~~~gi~~~a~~~g~--------------~~~~~~~~~~~~~~~~~~~l~~~~----vdGiIi~~~~-~~~~~~~~l~ 85 (294)
T 3qk7_A 25 FLEMISWIGIELGKRGL--------------DLLLIPDEPGEKYQSLIHLVETRR----VDALIVAHTQ-PEDFRLQYLQ 85 (294)
T ss_dssp HHHHHHHHHHHHHHTTC--------------EEEEEEECTTCCCHHHHHHHHHTC----CSEEEECSCC-SSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCC--------------EEEEEeCCChhhHHHHHHHHHcCC----CCEEEEeCCC-CChHHHHHHH
Confidence 45677777777777763 334444443211122223222332 2233333222 2346788899
Q ss_pred hCCCCeEEeCC
Q 024345 179 RHGIPYHYLCA 189 (269)
Q Consensus 179 ~~gIP~~~~~~ 189 (269)
+.|||+..++.
T Consensus 86 ~~~iPvV~~~~ 96 (294)
T 3qk7_A 86 KQNFPFLALGR 96 (294)
T ss_dssp HTTCCEEEESC
T ss_pred hCCCCEEEECC
Confidence 99999999884
No 240
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=37.12 E-value=71 Score=30.26 Aligned_cols=73 Identities=10% Similarity=0.115 Sum_probs=40.6
Q ss_pred CCeeEEEEEeCC-c-hHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhcc
Q 024345 127 PKYKVAVLASKQ-E-HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQN 204 (269)
Q Consensus 127 ~~~riav~~Sg~-g-~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~~ 204 (269)
.++||+|+|+|. | ..+..|++ .+. .+| ++.+++ ...+.+++++.++.+..++.. + .+++.+++++
T Consensus 22 ~~k~VlIiGAGgiG~aia~~L~~---~~g--~~V--~v~~R~---~~ka~~la~~~~~~~~~~D~~--d-~~~l~~~l~~ 88 (467)
T 2axq_A 22 MGKNVLLLGSGFVAQPVIDTLAA---NDD--INV--TVACRT---LANAQALAKPSGSKAISLDVT--D-DSALDKVLAD 88 (467)
T ss_dssp -CEEEEEECCSTTHHHHHHHHHT---STT--EEE--EEEESS---HHHHHHHHGGGTCEEEECCTT--C-HHHHHHHHHT
T ss_pred CCCEEEEECChHHHHHHHHHHHh---CCC--CeE--EEEECC---HHHHHHHHHhcCCcEEEEecC--C-HHHHHHHHcC
Confidence 457899999865 3 33333333 322 443 455552 344566666566665555421 1 2355566678
Q ss_pred CCEEEEEe
Q 024345 205 TDFLVLAR 212 (269)
Q Consensus 205 ~Dlivla~ 212 (269)
+|+||.+.
T Consensus 89 ~DvVIn~t 96 (467)
T 2axq_A 89 NDVVISLI 96 (467)
T ss_dssp SSEEEECS
T ss_pred CCEEEECC
Confidence 99988763
No 241
>2aif_A Ribosomal protein L7A; high-mobility like protein, transcription factor, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum} SCOP: d.79.3.1
Probab=36.76 E-value=39 Score=26.70 Aligned_cols=47 Identities=19% Similarity=0.318 Sum_probs=28.9
Q ss_pred EEeCCchHHHHHHHhhhcCCCCceEEEEeeCCCCCCC---hhHHHHHHhCCCCeEEeC
Q 024345 134 LASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPN---SHVIRFLERHGIPYHYLC 188 (269)
Q Consensus 134 ~~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~---~~v~~~a~~~gIP~~~~~ 188 (269)
+.+|...+.. .++.|+ +.++.+-.|-+ |+ .++..+|+++|||++++.
T Consensus 42 lv~G~~~v~k----al~~gk--aklViiA~D~~--~~~~~~~l~~lc~~~~IP~~~v~ 91 (135)
T 2aif_A 42 LRKGANEATK----ALNRGI--AEIVLLAADAE--PLEILLHLPLVCEDKNTPYVFVR 91 (135)
T ss_dssp EEESHHHHHH----HHHTTC--EEEEEEETTCS--CHHHHHHHHHHHHHTTCCEEEES
T ss_pred cccCHHHHHH----HHHcCC--CeEEEEecCCC--hHHHHhHHHHHHHhcCCcEEEEC
Confidence 4445434443 344563 55555555543 32 457788999999999875
No 242
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=36.73 E-value=1e+02 Score=26.00 Aligned_cols=75 Identities=15% Similarity=0.151 Sum_probs=40.0
Q ss_pred CeeEEEEEeCC--c-hHHHHHHHhhhcCCCCceEEEEeeCCCCCC-ChhHH---HHHHhCCCCeEEeCCCCCchHHHHHH
Q 024345 128 KYKVAVLASKQ--E-HCLVDFLYGWQEGKLPVEITCVISNHDRGP-NSHVI---RFLERHGIPYHYLCAKENEREEELLE 200 (269)
Q Consensus 128 ~~riav~~Sg~--g-~~l~~ll~~~~~g~l~~~i~~Visn~~~~~-~~~v~---~~a~~~gIP~~~~~~~~~~~e~~l~~ 200 (269)
++||+|.|... | +..+.|++ .| ++|.++ +.++... +..-. +.....|+.++..|.. ..+.+.+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~---~g---~~V~~l-~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~---d~~~l~~ 73 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLD---LG---HPTFLL-VRESTASSNSEKAQLLESFKASGANIVHGSID---DHASLVE 73 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHH---TT---CCEEEE-CCCCCTTTTHHHHHHHHHHHTTTCEEECCCTT---CHHHHHH
T ss_pred CCEEEEEcCCcHHHHHHHHHHHh---CC---CCEEEE-ECCcccccCHHHHHHHHHHHhCCCEEEEeccC---CHHHHHH
Confidence 56888888543 3 45556655 35 456543 3321100 11111 1123567777765521 2346777
Q ss_pred HhccCCEEEEEe
Q 024345 201 LVQNTDFLVLAR 212 (269)
Q Consensus 201 ~l~~~Dlivla~ 212 (269)
+++++|.+|.+.
T Consensus 74 ~~~~~d~vi~~a 85 (308)
T 1qyc_A 74 AVKNVDVVISTV 85 (308)
T ss_dssp HHHTCSEEEECC
T ss_pred HHcCCCEEEECC
Confidence 777999987654
No 243
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=36.31 E-value=1.5e+02 Score=24.19 Aligned_cols=73 Identities=8% Similarity=0.112 Sum_probs=39.8
Q ss_pred HHHHHHHHHhhhhhhccceeeeeecCCCCCeeEEEEEeCCc-hHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHH
Q 024345 99 REQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQE-HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFL 177 (269)
Q Consensus 99 ~~~L~e~L~~la~el~l~~~~~~~~~~~~~~riav~~Sg~g-~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a 177 (269)
...+.+.+++.+++.|. ++.++.+... .....+++.+.... +-++|..+.........+.+
T Consensus 17 ~~~~~~gi~~~a~~~g~--------------~~~~~~~~~~~~~~~~~~~~l~~~~----vdgiIi~~~~~~~~~~~~~~ 78 (272)
T 3o74_A 17 YARIAKQLEQGARARGY--------------QLLIASSDDQPDSERQLQQLFRARR----CDALFVASCLPPEDDSYREL 78 (272)
T ss_dssp HHHHHHHHHHHHHHTTC--------------EEEEEECTTCHHHHHHHHHHHHHTT----CSEEEECCCCCSSCCHHHHH
T ss_pred HHHHHHHHHHHHHHCCC--------------EEEEEeCCCCHHHHHHHHHHHHHcC----CCEEEEecCccccHHHHHHH
Confidence 46677777777777763 3444444432 22233344333332 22233322111234578889
Q ss_pred HhCCCCeEEeCC
Q 024345 178 ERHGIPYHYLCA 189 (269)
Q Consensus 178 ~~~gIP~~~~~~ 189 (269)
.+.|||+..++.
T Consensus 79 ~~~~iPvV~~~~ 90 (272)
T 3o74_A 79 QDKGLPVIAIDR 90 (272)
T ss_dssp HHTTCCEEEESS
T ss_pred HHcCCCEEEEcc
Confidence 999999999873
No 244
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=36.19 E-value=36 Score=27.66 Aligned_cols=69 Identities=10% Similarity=0.177 Sum_probs=37.5
Q ss_pred CCeeEEEEEeCCchHHHHHHHhhhcCCCCceEEEEeeCCCCCCCh-hHHHHHHhCCCCeEEeC-CCCCc-hHHHHHHHhc
Q 024345 127 PKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNS-HVIRFLERHGIPYHYLC-AKENE-REEELLELVQ 203 (269)
Q Consensus 127 ~~~riav~~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~-~v~~~a~~~gIP~~~~~-~~~~~-~e~~l~~~l~ 203 (269)
+++|++|+.+|+.- + .|+ +.| .|+ .+.++.+++|..+.... ..+++ -.+.+.+.++
T Consensus 6 ~~~rv~ii~tGdEl-----~----~G~--------i~D----sn~~~l~~~l~~~G~~v~~~~iv~Dd~~i~~al~~a~~ 64 (164)
T 3pzy_A 6 TTRSARVIIASTRA-----S----SGE--------YED----RCGPIITEWLAQQGFSSAQPEVVADGSPVGEALRKAID 64 (164)
T ss_dssp -CCEEEEEEECHHH-----H----C------------C----CHHHHHHHHHHHTTCEECCCEEECSSHHHHHHHHHHHH
T ss_pred CCCEEEEEEECCCC-----C----CCc--------eee----HHHHHHHHHHHHCCCEEEEEEEeCCHHHHHHHHHHHHh
Confidence 56899999999642 1 232 112 233 46777888888655332 11111 1133444454
Q ss_pred -cCCEEEEEeccee
Q 024345 204 -NTDFLVLARYMQV 216 (269)
Q Consensus 204 -~~Dlivla~y~~i 216 (269)
++|+|++.|=.-.
T Consensus 65 ~~~DlVittGG~s~ 78 (164)
T 3pzy_A 65 DDVDVILTSGGTGI 78 (164)
T ss_dssp TTCSEEEEESCCSS
T ss_pred CCCCEEEECCCCCC
Confidence 7999999874433
No 245
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=36.17 E-value=70 Score=29.07 Aligned_cols=71 Identities=14% Similarity=0.177 Sum_probs=42.0
Q ss_pred CCeeEEEEEeCCc--hHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhC----CCCeEEeCCCCCchHHHHHH
Q 024345 127 PKYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERH----GIPYHYLCAKENEREEELLE 200 (269)
Q Consensus 127 ~~~riav~~Sg~g--~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~----gIP~~~~~~~~~~~e~~l~~ 200 (269)
..+||+|+|+|.- ..++.++.. .+ .+-+ .+.|+ ......++++++ |+++...+ + +-+
T Consensus 128 ~~~~v~iIGaG~~a~~~a~al~~~--~~---~~~V-~V~~r---~~~~a~~la~~~~~~~g~~~~~~~----~----~~e 190 (350)
T 1x7d_A 128 NARKMALIGNGAQSEFQALAFHKH--LG---IEEI-VAYDT---DPLATAKLIANLKEYSGLTIRRAS----S----VAE 190 (350)
T ss_dssp TCCEEEEECCSTTHHHHHHHHHHH--SC---CCEE-EEECS---SHHHHHHHHHHHTTCTTCEEEECS----S----HHH
T ss_pred cCCeEEEECCcHHHHHHHHHHHHh--CC---CcEE-EEEcC---CHHHHHHHHHHHHhccCceEEEeC----C----HHH
Confidence 4469999999973 334555432 12 2222 45666 234567777765 66655432 1 224
Q ss_pred HhccCCEEEEEecc
Q 024345 201 LVQNTDFLVLARYM 214 (269)
Q Consensus 201 ~l~~~Dlivla~y~ 214 (269)
.++++|+|+++--.
T Consensus 191 av~~aDiVi~aTps 204 (350)
T 1x7d_A 191 AVKGVDIITTVTAD 204 (350)
T ss_dssp HHTTCSEEEECCCC
T ss_pred HHhcCCEEEEeccC
Confidence 45689999998664
No 246
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=36.14 E-value=38 Score=28.62 Aligned_cols=20 Identities=20% Similarity=0.212 Sum_probs=12.7
Q ss_pred CCCCeeEEEEEeCC-chHHHH
Q 024345 125 IDPKYKVAVLASKQ-EHCLVD 144 (269)
Q Consensus 125 ~~~~~riav~~Sg~-g~~l~~ 144 (269)
.-..+||+|+|.|. |..+-.
T Consensus 16 ~~~~~kIgiIG~G~mG~alA~ 36 (245)
T 3dtt_A 16 YFQGMKIAVLGTGTVGRTMAG 36 (245)
T ss_dssp ---CCEEEEECCSHHHHHHHH
T ss_pred ccCCCeEEEECCCHHHHHHHH
Confidence 34568999999998 454433
No 247
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=36.02 E-value=1.8e+02 Score=27.53 Aligned_cols=84 Identities=14% Similarity=0.199 Sum_probs=43.0
Q ss_pred eeEEEEEeCCc----hHHHHHHHhhhcCCCCceEEEEeeCCCCCCCh--hHHHHHHhCCCCeEEeCCCCCchH--HHHHH
Q 024345 129 YKVAVLASKQE----HCLVDFLYGWQEGKLPVEITCVISNHDRGPNS--HVIRFLERHGIPYHYLCAKENERE--EELLE 200 (269)
Q Consensus 129 ~riav~~Sg~g----~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~--~v~~~a~~~gIP~~~~~~~~~~~e--~~l~~ 200 (269)
.++.+++..+| +....|...++.. ..++..|-++.-+ +.+ ....++++.|+|++.........+ .+.++
T Consensus 100 p~vIlivG~~G~GKTTt~~kLA~~l~~~--G~kVllv~~D~~R-~aa~eqL~~~~~~~gvpv~~~~~~~dp~~i~~~al~ 176 (443)
T 3dm5_A 100 PTILLMVGIQGSGKTTTVAKLARYFQKR--GYKVGVVCSDTWR-PGAYHQLRQLLDRYHIEVFGNPQEKDAIKLAKEGVD 176 (443)
T ss_dssp SEEEEEECCTTSSHHHHHHHHHHHHHTT--TCCEEEEECCCSS-THHHHHHHHHHGGGTCEEECCTTCCCHHHHHHHHHH
T ss_pred CeEEEEECcCCCCHHHHHHHHHHHHHHC--CCeEEEEeCCCcc-hhHHHHHHHHHHhcCCcEEecCCCCCHHHHHHHHHH
Confidence 45555555555 4555555544432 2467666666533 221 245678888999886442211111 12233
Q ss_pred Hhc--cCCEEEE--Eecce
Q 024345 201 LVQ--NTDFLVL--ARYMQ 215 (269)
Q Consensus 201 ~l~--~~Dlivl--a~y~~ 215 (269)
..+ ++|++++ +|+..
T Consensus 177 ~a~~~~~DvVIIDTaGrl~ 195 (443)
T 3dm5_A 177 YFKSKGVDIIIVDTAGRHK 195 (443)
T ss_dssp HHHHTTCSEEEEECCCCSS
T ss_pred HHHhCCCCEEEEECCCccc
Confidence 333 5898887 44433
No 248
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=35.98 E-value=89 Score=26.67 Aligned_cols=76 Identities=9% Similarity=0.031 Sum_probs=40.7
Q ss_pred CCeeEEEEEeCC--c-hHHHHHHHhhhcCCCCceEEEEeeCCC-CCCCh-hH--HHHHHhCCCCeEEeCCCCCchHHHHH
Q 024345 127 PKYKVAVLASKQ--E-HCLVDFLYGWQEGKLPVEITCVISNHD-RGPNS-HV--IRFLERHGIPYHYLCAKENEREEELL 199 (269)
Q Consensus 127 ~~~riav~~Sg~--g-~~l~~ll~~~~~g~l~~~i~~Visn~~-~~~~~-~v--~~~a~~~gIP~~~~~~~~~~~e~~l~ 199 (269)
.+++|+|.|... | +..+.|++ .| ++|.++ +.++ ...+. .. .+.....|+.++..|.. +.+.+.
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~---~g---~~V~~~-~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~---d~~~l~ 72 (321)
T 3c1o_A 3 HMEKIIIYGGTGYIGKFMVRASLS---FS---HPTFIY-ARPLTPDSTPSSVQLREEFRSMGVTIIEGEME---EHEKMV 72 (321)
T ss_dssp -CCCEEEETTTSTTHHHHHHHHHH---TT---CCEEEE-ECCCCTTCCHHHHHHHHHHHHTTCEEEECCTT---CHHHHH
T ss_pred cccEEEEEcCCchhHHHHHHHHHh---CC---CcEEEE-ECCcccccChHHHHHHHHhhcCCcEEEEecCC---CHHHHH
Confidence 456888887533 3 45555555 35 566543 4331 10011 11 11123568877776532 235677
Q ss_pred HHhccCCEEEEEe
Q 024345 200 ELVQNTDFLVLAR 212 (269)
Q Consensus 200 ~~l~~~Dlivla~ 212 (269)
++++++|.+|.+.
T Consensus 73 ~a~~~~d~vi~~a 85 (321)
T 3c1o_A 73 SVLKQVDIVISAL 85 (321)
T ss_dssp HHHTTCSEEEECC
T ss_pred HHHcCCCEEEECC
Confidence 7888999988643
No 249
>3trg_A Acylphosphatase; fatty acid and phospholipid metabolism, hydrolase; 1.60A {Coxiella burnetii}
Probab=35.78 E-value=90 Score=23.18 Aligned_cols=59 Identities=14% Similarity=0.050 Sum_probs=43.4
Q ss_pred HHHHHHHhhhhhhccceeeeeecCCCCCeeEEEEEeCCchHHHHHHHhhhcCCCCceEEEEee
Q 024345 101 QMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVIS 163 (269)
Q Consensus 101 ~L~e~L~~la~el~l~~~~~~~~~~~~~~riav~~Sg~g~~l~~ll~~~~~g~l~~~i~~Vis 163 (269)
-+|--...+|.++++.-|+... .+. +|-+.+.|....+.++++.++.|.-.+.|.-|-.
T Consensus 26 GFR~~v~~~A~~lgL~G~VrN~--~dG--~Vei~~eG~~~~l~~f~~~l~~gPp~A~V~~v~~ 84 (98)
T 3trg_A 26 FFRESVRKKAEELQLTGWVKNL--SHG--DVELVACGERDSIMILTEWLWEGPPQAAVSNVNW 84 (98)
T ss_dssp CHHHHHHHHHHHTTCEEEEEEC--TTS--CEEEEEEEEHHHHHHHHHHTTTCSTTCEEEEEEE
T ss_pred CccHHHHHHHHHcCCeEEEEEC--CCC--EEEEEEEECHHHHHHHHHHHHhCCCCcEEEEEEE
Confidence 3788888899999998776533 223 7888888888889999998888753466766543
No 250
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=35.69 E-value=18 Score=33.93 Aligned_cols=23 Identities=17% Similarity=0.284 Sum_probs=16.7
Q ss_pred CCCCeeEEEEEeCCc-hHHHHHHH
Q 024345 125 IDPKYKVAVLASKQE-HCLVDFLY 147 (269)
Q Consensus 125 ~~~~~riav~~Sg~g-~~l~~ll~ 147 (269)
..+|.||+|+|+|.+ +.|-.++.
T Consensus 31 ~~~p~KI~ViGaGsWGTALA~~la 54 (391)
T 4fgw_A 31 AEKPFKVTVIGSGNWGTTIAKVVA 54 (391)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHH
T ss_pred cCCCCeEEEECcCHHHHHHHHHHH
Confidence 457889999999994 77766554
No 251
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=35.62 E-value=33 Score=30.25 Aligned_cols=47 Identities=9% Similarity=0.133 Sum_probs=25.7
Q ss_pred CCeeEEEEEeCC-chHH-HHHHHhhhcCCCCc-eEEEEeeCCCCCCChhHHHHHHhCCCC
Q 024345 127 PKYKVAVLASKQ-EHCL-VDFLYGWQEGKLPV-EITCVISNHDRGPNSHVIRFLERHGIP 183 (269)
Q Consensus 127 ~~~riav~~Sg~-g~~l-~~ll~~~~~g~l~~-~i~~Visn~~~~~~~~v~~~a~~~gIP 183 (269)
.++||+|+|.|. |..+ ..|.+ .| + +|. +.|+. ++....+.+.+.|+.
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~---~G---~~~V~--~~dr~--~~~~~~~~~~~~g~~ 72 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQ---AG---AIDMA--AYDAA--SAESWRPRAEELGVS 72 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHH---HS---CCEEE--EECSS--CHHHHHHHHHHTTCE
T ss_pred CCCEEEEECccHHHHHHHHHHHH---CC---CCeEE--EEcCC--CCHHHHHHHHHCCCE
Confidence 457999999998 5444 34443 35 3 443 45552 112345666677753
No 252
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=35.35 E-value=33 Score=26.58 Aligned_cols=31 Identities=19% Similarity=0.444 Sum_probs=23.1
Q ss_pred eEEE-EeeCCCCCCChhHHHHHHhCCCCeEEeC
Q 024345 157 EITC-VISNHDRGPNSHVIRFLERHGIPYHYLC 188 (269)
Q Consensus 157 ~i~~-Visn~~~~~~~~v~~~a~~~gIP~~~~~ 188 (269)
++.| |+|...+ ++..+++.|+++|||+...+
T Consensus 74 ~~~~iIlt~g~~-~~~~i~~~A~~~~ipvl~t~ 105 (139)
T 2ioj_A 74 NVRCLILTGNLE-PVQLVLTKAEERGVPVILTG 105 (139)
T ss_dssp TEEEEEEETTCC-CCHHHHHHHHHHTCCEEECS
T ss_pred CCcEEEEcCCCC-CCHHHHHHHHHCCCeEEEEC
Confidence 3555 4554433 67789999999999999866
No 253
>1w41_A 50S ribosomal protein L30E; electrostatic interactions, thermostability, protein engineering; 1.7A {Thermococcus celer} SCOP: d.79.3.1 PDB: 3n4y_A 3lfo_A 1w40_A 1go0_A 1go1_A 1h7m_A 1w42_A 1w3e_X 3ra6_A 3ra5_A 3n4z_A 2bo1_A
Probab=35.31 E-value=21 Score=26.55 Aligned_cols=48 Identities=13% Similarity=0.142 Sum_probs=27.3
Q ss_pred EEeCCchHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEe
Q 024345 134 LASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYL 187 (269)
Q Consensus 134 ~~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~ 187 (269)
+.+|....+. .+++|+ +.++.+-.|-+..-..++..+|+++|||++.+
T Consensus 17 l~~G~~~v~k----ai~~gk--a~lViiA~D~~~~~~~~l~~~c~~~~vp~~~~ 64 (101)
T 1w41_A 17 IVMGARKSIQ----YAKMGG--AKLIIVARNARPDIKEDIEYYARLSGIPVYEF 64 (101)
T ss_dssp EEESHHHHHH----HHHHTC--CSEEEEETTSCHHHHHHHHHHHHHHTCCEEEE
T ss_pred EeECHHHHHH----HHHcCC--CcEEEEeCCCCHHHHHHHHHHHHhcCCCEEEe
Confidence 4444434444 334564 55655555531100145778899999998875
No 254
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=34.91 E-value=45 Score=29.75 Aligned_cols=17 Identities=29% Similarity=0.292 Sum_probs=12.1
Q ss_pred eEEEEEeCC-chHHHHHH
Q 024345 130 KVAVLASKQ-EHCLVDFL 146 (269)
Q Consensus 130 riav~~Sg~-g~~l~~ll 146 (269)
||+|+|.|. |..+-..|
T Consensus 17 kI~iIG~G~mG~~la~~L 34 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVL 34 (366)
T ss_dssp EEEEECCSHHHHHHHHHH
T ss_pred eEEEECCCHHHHHHHHHH
Confidence 999999998 55544333
No 255
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=34.88 E-value=2.1e+02 Score=24.38 Aligned_cols=83 Identities=14% Similarity=0.179 Sum_probs=42.0
Q ss_pred CCeeEEEEEeCCc--hHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCe-EEeCC-CC-Cch-------
Q 024345 127 PKYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPY-HYLCA-KE-NER------- 194 (269)
Q Consensus 127 ~~~riav~~Sg~g--~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~-~~~~~-~~-~~~------- 194 (269)
++|||++++...+ .....++..+++..-.+++..+++.. ......+..+.+|+++ +.+.. .. ...
T Consensus 7 ~~mkIl~v~~~~~~~~~~~~l~~~L~~~~~~~~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (375)
T 3beo_A 7 ERLKVMTIFGTRPEAIKMAPLVLELQKHPEKIESIVTVTAQ---HRQMLDQVLSIFGITPDFDLNIMKDRQTLIDITTRG 83 (375)
T ss_dssp SCEEEEEEECSHHHHHHHHHHHHHHTTCTTTEEEEEEECCS---SSHHHHHHHHHHTCCCSEECCCCCTTCCHHHHHHHH
T ss_pred cCceEEEEecCcHHHHHHHHHHHHHHhCCCCCCeEEEEcCC---CHHHHHHHHHHcCCCCccccccCCCcccHHHHHHHH
Confidence 4589998875433 23345555554421015665555544 2222334445578765 33331 11 110
Q ss_pred HHHHHHHhc--cCCEEEEEe
Q 024345 195 EEELLELVQ--NTDFLVLAR 212 (269)
Q Consensus 195 e~~l~~~l~--~~Dlivla~ 212 (269)
-..+.+.++ +||+|++.+
T Consensus 84 ~~~l~~~l~~~~pDvv~~~~ 103 (375)
T 3beo_A 84 LEGLDKVMKEAKPDIVLVHG 103 (375)
T ss_dssp HHHHHHHHHHHCCSEEEEET
T ss_pred HHHHHHHHHHhCCCEEEEeC
Confidence 122455555 899999965
No 256
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=34.59 E-value=70 Score=27.96 Aligned_cols=78 Identities=13% Similarity=0.106 Sum_probs=37.0
Q ss_pred CeeEEEEEeCC-chHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCC----CCCchHHHHHHHh
Q 024345 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCA----KENEREEELLELV 202 (269)
Q Consensus 128 ~~riav~~Sg~-g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~----~~~~~e~~l~~~l 202 (269)
++||+|+|.|. |..+-..+.. .| ++|.+ .++ ....+.++.+..++.+.-... +......++.+.+
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~--~g---~~V~~--~~r---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLAL--KG---QSVLA--WDI---DAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAV 73 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TT---CEEEE--ECS---CHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHH
T ss_pred cCeEEEECCCHHHHHHHHHHHh--CC---CEEEE--EeC---CHHHHHHHHhcCCeEEeccccccccccceecCCHHHHH
Confidence 47999999988 4544433332 34 46543 344 123345555555543221000 0000000122334
Q ss_pred ccCCEEEEEecce
Q 024345 203 QNTDFLVLARYMQ 215 (269)
Q Consensus 203 ~~~Dlivla~y~~ 215 (269)
+++|+|+++--..
T Consensus 74 ~~~D~vi~~v~~~ 86 (359)
T 1bg6_A 74 KDADVILIVVPAI 86 (359)
T ss_dssp TTCSEEEECSCGG
T ss_pred hcCCEEEEeCCch
Confidence 5789888875433
No 257
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=34.59 E-value=1.2e+02 Score=25.41 Aligned_cols=75 Identities=13% Similarity=0.158 Sum_probs=40.6
Q ss_pred CeeEEEEEeCC--c-hHHHHHHHhhhcCCCCceEEEEeeCCC-CCCC--hhHH--HHHHhCCCCeEEeCCCCCchHHHHH
Q 024345 128 KYKVAVLASKQ--E-HCLVDFLYGWQEGKLPVEITCVISNHD-RGPN--SHVI--RFLERHGIPYHYLCAKENEREEELL 199 (269)
Q Consensus 128 ~~riav~~Sg~--g-~~l~~ll~~~~~g~l~~~i~~Visn~~-~~~~--~~v~--~~a~~~gIP~~~~~~~~~~~e~~l~ 199 (269)
++||+|.|... | +..+.|++ .| ++|.++ +.++ ...+ .... +.....|+.++..|.. ..+.+.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~---~g---~~V~~~-~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~---d~~~l~ 71 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIK---AG---NPTYAL-VRKTITAANPETKEELIDNYQSLGVILLEGDIN---DHETLV 71 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHH---HT---CCEEEE-ECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTT---CHHHHH
T ss_pred CcEEEEECCCchHHHHHHHHHHh---CC---CcEEEE-ECCCcccCChHHHHHHHHHHHhCCCEEEEeCCC---CHHHHH
Confidence 46788887543 3 45566665 35 456543 3321 1001 1111 1123568887776632 234677
Q ss_pred HHhccCCEEEEEe
Q 024345 200 ELVQNTDFLVLAR 212 (269)
Q Consensus 200 ~~l~~~Dlivla~ 212 (269)
++++++|.+|.+.
T Consensus 72 ~~~~~~d~vi~~a 84 (307)
T 2gas_A 72 KAIKQVDIVICAA 84 (307)
T ss_dssp HHHTTCSEEEECS
T ss_pred HHHhCCCEEEECC
Confidence 7788999987654
No 258
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=34.36 E-value=1e+02 Score=27.45 Aligned_cols=35 Identities=14% Similarity=0.112 Sum_probs=21.0
Q ss_pred CCeeEEEEEeCCc-hH-HHHHHHhhhcCCCCceEEEEeeCC
Q 024345 127 PKYKVAVLASKQE-HC-LVDFLYGWQEGKLPVEITCVISNH 165 (269)
Q Consensus 127 ~~~riav~~Sg~g-~~-l~~ll~~~~~g~l~~~i~~Visn~ 165 (269)
+++||+|+|.|.. .. ....+.. .+ .+++++|+...
T Consensus 4 ~~~rvgiiG~G~~g~~~~~~~l~~--~~--~~~l~av~d~~ 40 (358)
T 3gdo_A 4 DTIKVGILGYGLSGSVFHGPLLDV--LD--EYQISKIMTSR 40 (358)
T ss_dssp TCEEEEEECCSHHHHHTTHHHHTT--CT--TEEEEEEECSC
T ss_pred CcceEEEEccCHHHHHHHHHHHhh--CC--CeEEEEEEcCC
Confidence 5689999999873 32 2333332 12 37888766543
No 259
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=34.05 E-value=72 Score=28.85 Aligned_cols=43 Identities=7% Similarity=0.029 Sum_probs=25.5
Q ss_pred HHHHhccCCEEEEEeccee-----------------ee---cccccccccccCCCccccCCCCCCCCCcH
Q 024345 198 LLELVQNTDFLVLARYMQV-----------------NR---IRLYVAQLFSCLVTEQLTVLNSSLGGINI 247 (269)
Q Consensus 198 l~~~l~~~Dlivla~y~~i-----------------l~---l~~~~~~~iN~~~~~iHpSLLP~~rG~~p 247 (269)
+.+.++++|+|.+-.|-.+ +. ++..+..++= .|| ||.+||...
T Consensus 210 ~~eav~~aDvvyt~~w~smg~e~~~~~r~~~~~~y~v~~~~l~~a~~~ai~-----mH~--lP~~Rg~EI 272 (309)
T 4f2g_A 210 PNEACKGADLVTTDVWTSMGFEAENEARKRAFADWCVDEEMMSHANSDALF-----MHC--LPAHRGEEV 272 (309)
T ss_dssp HHHHTTTCSEEEECCC------------CCSGGGGCBCHHHHTTSCTTCEE-----EEC--SSCCBTTTB
T ss_pred HHHHhcCCCEEEecccccCcchhhHHHHHHHhcCceeCHHHHHhcCCCeEE-----ECC--CCCCCCcee
Confidence 3456678999988553211 11 3333344555 788 799998543
No 260
>2e18_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, NPPSFA, national project on Pro structural and functional analyses; 2.10A {Pyrococcus horikoshii}
Probab=34.00 E-value=1.5e+02 Score=25.21 Aligned_cols=58 Identities=14% Similarity=0.007 Sum_probs=37.2
Q ss_pred eeEEEEEeCCc-hHH-HHHHHhhhcCCCCceEEEEeeCCCCC-CChhHHHHHHhCCCCeEEeCC
Q 024345 129 YKVAVLASKQE-HCL-VDFLYGWQEGKLPVEITCVISNHDRG-PNSHVIRFLERHGIPYHYLCA 189 (269)
Q Consensus 129 ~riav~~Sg~g-~~l-~~ll~~~~~g~l~~~i~~Visn~~~~-~~~~v~~~a~~~gIP~~~~~~ 189 (269)
.++++..||.- |.+ -.++... .| +.++.++..+.... .-..+.++|++.|||++.++.
T Consensus 23 ~~vvv~lSGGiDSs~~~~l~~~~-~g--~~~v~av~~~~~~~~~~~~a~~~a~~lgi~~~~i~i 83 (257)
T 2e18_A 23 NGVVIGISGGVDSATVAYLATKA-LG--KEKVLGLIMPYFENKDVEDAKLVAEKLGIGYKVINI 83 (257)
T ss_dssp TCEEEECCSSHHHHHHHHHHHHH-HC--GGGEEEEECCSSCSTHHHHHHHHHHHHTCEEEECCC
T ss_pred CcEEEEecCCHHHHHHHHHHHHh-cC--CCcEEEEEeCCCCchHHHHHHHHHHHhCCCEEEEEC
Confidence 58999999974 433 3333321 12 24677777765321 113578889999999999873
No 261
>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal PHOS isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2
Probab=33.85 E-value=40 Score=32.68 Aligned_cols=35 Identities=14% Similarity=0.263 Sum_probs=30.7
Q ss_pred cceEEEEEEcCCCcChHHHHHHHHHhCCCeEeEeeee
Q 024345 40 LTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVF 76 (269)
Q Consensus 40 ~~~~iItV~G~DrpGIVa~VS~~La~~giNI~dl~~~ 76 (269)
.....+.|.-+||||-.+++++.|. +.||.+++-.
T Consensus 336 gr~~~~~v~~p~~pg~l~~~~~~l~--~~~i~~~~~~ 370 (514)
T 1tdj_A 336 QREALLAVTIPEEKGSFLKFCQLLG--GRSVTEFNYR 370 (514)
T ss_dssp CCEEEEEEECCBSSSCSHHHHHTTS--SSEEEEEEEE
T ss_pred CCcccccccCCCCCchHHHHHHHhC--CCceEEEEee
Confidence 3467788999999999999999997 7999999875
No 262
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=33.82 E-value=93 Score=29.73 Aligned_cols=71 Identities=15% Similarity=0.162 Sum_probs=38.7
Q ss_pred CCeeEEEEEeCC-chHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhC--CCCeEEeCCCCCchHHHHHHHhc
Q 024345 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERH--GIPYHYLCAKENEREEELLELVQ 203 (269)
Q Consensus 127 ~~~riav~~Sg~-g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~--gIP~~~~~~~~~~~e~~l~~~l~ 203 (269)
+++||+|+|.|. |.+|-.-+.. .| ++|. +.|+. ...+.+++++. |..+.... + -+++.+.++
T Consensus 3 ~~~kIgiIGlG~MG~~lA~~L~~--~G---~~V~--v~dr~---~~~~~~l~~~g~~g~~i~~~~----s-~~e~v~~l~ 67 (484)
T 4gwg_A 3 AQADIALIGLAVMGQNLILNMND--HG---FVVC--AFNRT---VSKVDDFLANEAKGTKVVGAQ----S-LKEMVSKLK 67 (484)
T ss_dssp CCBSEEEECCSHHHHHHHHHHHH--TT---CCEE--EECSS---THHHHHHHHTTTTTSSCEECS----S-HHHHHHTBC
T ss_pred CCCEEEEEChhHHHHHHHHHHHH--CC---CEEE--EEeCC---HHHHHHHHhcccCCCceeccC----C-HHHHHhhcc
Confidence 568999999998 6666433332 35 4553 45662 34455555442 33332211 1 234555455
Q ss_pred cCCEEEEEe
Q 024345 204 NTDFLVLAR 212 (269)
Q Consensus 204 ~~Dlivla~ 212 (269)
++|+|+++=
T Consensus 68 ~aDvVil~V 76 (484)
T 4gwg_A 68 KPRRIILLV 76 (484)
T ss_dssp SSCEEEECS
T ss_pred CCCEEEEec
Confidence 789888763
No 263
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=33.69 E-value=2.2e+02 Score=26.96 Aligned_cols=64 Identities=5% Similarity=0.099 Sum_probs=36.7
Q ss_pred CCHHHHHHHHHhhhhhhccceeeeeecCCCCCeeEEEEEeCC-chHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHH
Q 024345 97 WPREQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIR 175 (269)
Q Consensus 97 ~~~~~L~e~L~~la~el~l~~~~~~~~~~~~~~riav~~Sg~-g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~ 175 (269)
+....|...|.+.+++ .++.||+++|.|. |..+ +..+... -..++++|.... ...+.+
T Consensus 5 ~~~~~l~~~l~~r~~~-------------~k~IRVGIIGaG~iG~~~---~~~l~~~-~~veLvAV~D~~----~era~~ 63 (446)
T 3upl_A 5 VALVGLARDLAARAET-------------GKPIRIGLIGAGEMGTDI---VTQVARM-QGIEVGALSARR----LPNTFK 63 (446)
T ss_dssp SCCCHHHHHHHHHHHT-------------TCCEEEEEECCSHHHHHH---HHHHTTS-SSEEEEEEECSS----THHHHH
T ss_pred cchHHHHHHHHHHHhc-------------CCceEEEEECChHHHHHH---HHHHhhC-CCcEEEEEEeCC----HHHHHH
Confidence 4445566666665433 3568999999987 3333 2222221 136787766543 334566
Q ss_pred HHHhC-C
Q 024345 176 FLERH-G 181 (269)
Q Consensus 176 ~a~~~-g 181 (269)
.++++ |
T Consensus 64 ~a~~~yG 70 (446)
T 3upl_A 64 AIRTAYG 70 (446)
T ss_dssp HHHHHHS
T ss_pred HHHHhcC
Confidence 66665 6
No 264
>3cpq_A 50S ribosomal protein L30E; RNA-protein, elongation factor, ribonucleoprotein, structural genomics, NPPSFA; 1.90A {Methanocaldococcus jannaschii}
Probab=33.62 E-value=26 Score=26.60 Aligned_cols=48 Identities=10% Similarity=0.108 Sum_probs=27.1
Q ss_pred EEeCCchHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEe
Q 024345 134 LASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYL 187 (269)
Q Consensus 134 ~~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~ 187 (269)
+.+|....+.+ ++.|+ +.++.+-.|-+..-..++..+|+.++||++.+
T Consensus 22 l~~G~~~v~ka----i~~gk--a~lViiA~D~~~~~~~~l~~~c~~~~Vp~~~~ 69 (110)
T 3cpq_A 22 VILGSKRTIKF----VKHGE--GKLVVLAGNIPKDLEEDVKYYAKLSNIPVYQH 69 (110)
T ss_dssp EEESHHHHHHH----HHTTC--CSEEEECTTCBHHHHHHHHHHHHHTTCCEEEC
T ss_pred eeeCHHHHHHH----HHcCC--ceEEEEeCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 44454344443 34564 45554444431100145778899999998876
No 265
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=33.47 E-value=70 Score=27.07 Aligned_cols=44 Identities=11% Similarity=0.019 Sum_probs=23.7
Q ss_pred eeEEEEEeCC-chHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCC
Q 024345 129 YKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP 183 (269)
Q Consensus 129 ~riav~~Sg~-g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP 183 (269)
|||+|+|.|. |..+-..+.. .| ++|. +.+++ ..-.+.+.+.|++
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~--~g---~~V~--~~~~~----~~~~~~~~~~g~~ 45 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRR--RG---HYLI--GVSRQ----QSTCEKAVERQLV 45 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TT---CEEE--EECSC----HHHHHHHHHTTSC
T ss_pred CEEEEEcCcHHHHHHHHHHHH--CC---CEEE--EEECC----HHHHHHHHhCCCC
Confidence 5899999887 4444333322 34 3554 33442 2223445577775
No 266
>2bjd_A Acylphosphatase; hyperthermophIle, hydrolase; 1.27A {Sulfolobus solfataricus} PDB: 2bje_A 1y9o_A
Probab=33.25 E-value=1.1e+02 Score=22.86 Aligned_cols=59 Identities=17% Similarity=0.085 Sum_probs=43.1
Q ss_pred HHHHHHHHHhhhhhhccceeeeeecCCCCCeeEEEEEeCCchHHHHHHHhhhcCCCCceEEEE
Q 024345 99 REQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCV 161 (269)
Q Consensus 99 ~~~L~e~L~~la~el~l~~~~~~~~~~~~~~riav~~Sg~g~~l~~ll~~~~~g~l~~~i~~V 161 (269)
-=-+|--...+|.++|+.=|+... .+. +|-+.+.|....+.++++.++.|.-.+.|.-|
T Consensus 26 GVGFR~~v~~~A~~lgL~G~V~N~--~dG--~Vei~~eG~~~~i~~f~~~l~~gP~~A~V~~v 84 (101)
T 2bjd_A 26 GVGFRKFVQIHAIRLGIKGYAKNL--PDG--SVEVVAEGYEEALSKLLERIKQGPPAAEVEKV 84 (101)
T ss_dssp SSSHHHHHHHHHHHTTCEEEEEEC--TTS--CEEEEEEEEHHHHHHHHHHHTTCSTTCEEEEE
T ss_pred CcCHHHHHHHHHHHcCCeEEEEEC--CCC--cEEEEEEeCHHHHHHHHHHHHhCCCccEEEEE
Confidence 344788889999999997765422 233 67788888888899999988887433677665
No 267
>1urr_A CG18505 protein; acylphosphatase, enzyme; 1.5A {Drosophila melanogaster} SCOP: d.58.10.1
Probab=33.22 E-value=1.4e+02 Score=22.22 Aligned_cols=59 Identities=7% Similarity=-0.103 Sum_probs=43.2
Q ss_pred HHHHHHHhhhhhhccceeeeeecCCCCCeeEEEEEeCCchHHHHHHHhhh-cCCCCceEEEEee
Q 024345 101 QMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQ-EGKLPVEITCVIS 163 (269)
Q Consensus 101 ~L~e~L~~la~el~l~~~~~~~~~~~~~~riav~~Sg~g~~l~~ll~~~~-~g~l~~~i~~Vis 163 (269)
-+|--...+|.++|+.=|+... .+. +|-+.+.|+...+.++++.++ +|.-.+.|.-|-.
T Consensus 25 GFR~~v~~~A~~lgL~G~V~N~--~dG--~Vei~~eG~~~~l~~f~~~l~~~gP~~a~V~~v~~ 84 (102)
T 1urr_A 25 FFRKHTSHEAKRLGVRGWCMNT--RDG--TVKGQLEAPMMNLMEMKHWLENNRIPNAKVSKAEF 84 (102)
T ss_dssp SHHHHHHHHHHHHTCEEEEEEC--TTS--CEEEEEEECHHHHHHHHHHHHHCCSTTCEEEEEEE
T ss_pred ChhHHHHHHHHHhCCcEEEEEC--CCC--CEEEEEEcCHHHHHHHHHHHHhcCCCccEEEEEEE
Confidence 3788888899999998765432 233 788888888888999999887 5644467776644
No 268
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=33.16 E-value=1.4e+02 Score=24.63 Aligned_cols=72 Identities=13% Similarity=0.171 Sum_probs=41.0
Q ss_pred HHHHHHHHHhhhhhhccceeeeeecCCCCCeeEEEEEeCCc-hHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHH
Q 024345 99 REQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQE-HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFL 177 (269)
Q Consensus 99 ~~~L~e~L~~la~el~l~~~~~~~~~~~~~~riav~~Sg~g-~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a 177 (269)
...+.+.+++.+++.|. ++.++.+... .....+++.+.... +-++|..... .+....+.+
T Consensus 28 ~~~~~~gi~~~a~~~g~--------------~~~~~~~~~~~~~~~~~~~~~~~~~----vdgiIi~~~~-~~~~~~~~l 88 (292)
T 3k4h_A 28 FPEVIRGISSFAHVEGY--------------ALYMSTGETEEEIFNGVVKMVQGRQ----IGGIILLYSR-ENDRIIQYL 88 (292)
T ss_dssp HHHHHHHHHHHHHHTTC--------------EEEECCCCSHHHHHHHHHHHHHTTC----CCEEEESCCB-TTCHHHHHH
T ss_pred HHHHHHHHHHHHHHcCC--------------EEEEEeCCCCHHHHHHHHHHHHcCC----CCEEEEeCCC-CChHHHHHH
Confidence 46677777777777763 3333333333 22334444443442 3333332222 234678889
Q ss_pred HhCCCCeEEeCC
Q 024345 178 ERHGIPYHYLCA 189 (269)
Q Consensus 178 ~~~gIP~~~~~~ 189 (269)
.+.|||+..++.
T Consensus 89 ~~~~iPvV~~~~ 100 (292)
T 3k4h_A 89 HEQNFPFVLIGK 100 (292)
T ss_dssp HHTTCCEEEESC
T ss_pred HHCCCCEEEECC
Confidence 999999998873
No 269
>1vl2_A Argininosuccinate synthase; TM1780, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics, ligase; 1.65A {Thermotoga maritima} SCOP: c.26.2.1 d.210.1.1
Probab=33.01 E-value=67 Score=30.38 Aligned_cols=61 Identities=13% Similarity=0.107 Sum_probs=39.2
Q ss_pred CCCCCeeEEEEEeCCc--hHHHHHHHhhhcCCCCceEEEEeeCCCCCCC-hhHHHHHHhCCC-CeEEeCC
Q 024345 124 DIDPKYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGPN-SHVIRFLERHGI-PYHYLCA 189 (269)
Q Consensus 124 ~~~~~~riav~~Sg~g--~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~-~~v~~~a~~~gI-P~~~~~~ 189 (269)
....+.||++..||.- +.+..++.. +| .+|.+|..+-.-..+ ..+.+.|++.|| |+++++.
T Consensus 10 ~~~~~~KVVVA~SGGlDSSv~a~~Lke--~G---~eViavt~d~Gq~~Ele~A~~vA~~lGi~~~~VvDl 74 (421)
T 1vl2_A 10 HHHMKEKVVLAYSGGLDTSVILKWLCE--KG---FDVIAYVANVGQKDDFVAIKEKALKTGASKVYVEDL 74 (421)
T ss_dssp ----CCEEEEECCSSHHHHHHHHHHHH--TT---CEEEEEEEESSCCCCHHHHHHHHHHHTCSEEEEEEC
T ss_pred hccccCCEEEEeCCcHHHHHHHHHHHH--CC---CeEEEEEEEcCCHHHHHHHHHHHHHcCCceEEEEec
Confidence 3456789999999974 444444432 35 688887666421112 468999999999 8888873
No 270
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=32.78 E-value=1.1e+02 Score=26.58 Aligned_cols=77 Identities=16% Similarity=0.123 Sum_probs=43.0
Q ss_pred CeeEEEEEeCC--c-hHHHHHHHhhhcCCCCceEEEEeeCCCCCCChh--HHHHHHhCCCCeEEeCCCCCchHHHHHHHh
Q 024345 128 KYKVAVLASKQ--E-HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSH--VIRFLERHGIPYHYLCAKENEREEELLELV 202 (269)
Q Consensus 128 ~~riav~~Sg~--g-~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~--v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l 202 (269)
++||.|.|... | +.++.|++ .| ++|.++.-+... .... ..+.....|+.++..|-. +.+++.+++
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~---~g---~~V~~l~R~~~~-~~~~~~~~~~l~~~~v~~~~~Dl~---d~~~l~~~~ 79 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLD---AH---RPTYILARPGPR-SPSKAKIFKALEDKGAIIVYGLIN---EQEAMEKIL 79 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHH---TT---CCEEEEECSSCC-CHHHHHHHHHHHHTTCEEEECCTT---CHHHHHHHH
T ss_pred CCeEEEECCCcHHHHHHHHHHHH---CC---CCEEEEECCCCC-ChhHHHHHHHHHhCCcEEEEeecC---CHHHHHHHH
Confidence 46888888754 3 34455544 34 566654443211 1111 122234578888876632 245677888
Q ss_pred c--cCCEEEEEecc
Q 024345 203 Q--NTDFLVLARYM 214 (269)
Q Consensus 203 ~--~~Dlivla~y~ 214 (269)
+ ++|.||.+.-.
T Consensus 80 ~~~~~d~Vi~~a~~ 93 (346)
T 3i6i_A 80 KEHEIDIVVSTVGG 93 (346)
T ss_dssp HHTTCCEEEECCCG
T ss_pred hhCCCCEEEECCch
Confidence 8 89998876544
No 271
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=32.66 E-value=30 Score=29.87 Aligned_cols=64 Identities=11% Similarity=0.128 Sum_probs=33.0
Q ss_pred CeeEEEEEeCC-chHH-HHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhccC
Q 024345 128 KYKVAVLASKQ-EHCL-VDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNT 205 (269)
Q Consensus 128 ~~riav~~Sg~-g~~l-~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~~~ 205 (269)
++||+|+|.|. |..+ ..|.+ .| ++|. +.+++ ...+.+++ +.|+... + + ..+.++++
T Consensus 1 M~~I~iiG~G~mG~~~a~~l~~---~G---~~V~--~~dr~---~~~~~~~~-~~g~~~~--~----~----~~~~~~~a 58 (287)
T 3pdu_A 1 MTTYGFLGLGIMGGPMAANLVR---AG---FDVT--VWNRN---PAKCAPLV-ALGARQA--S----S----PAEVCAAC 58 (287)
T ss_dssp CCCEEEECCSTTHHHHHHHHHH---HT---CCEE--EECSS---GGGGHHHH-HHTCEEC--S----C----HHHHHHHC
T ss_pred CCeEEEEccCHHHHHHHHHHHH---CC---CeEE--EEcCC---HHHHHHHH-HCCCeec--C----C----HHHHHHcC
Confidence 46999999998 5544 33333 35 4554 44552 22233333 3454221 1 1 12333467
Q ss_pred CEEEEEec
Q 024345 206 DFLVLARY 213 (269)
Q Consensus 206 Dlivla~y 213 (269)
|+|+++--
T Consensus 59 dvvi~~v~ 66 (287)
T 3pdu_A 59 DITIAMLA 66 (287)
T ss_dssp SEEEECCS
T ss_pred CEEEEEcC
Confidence 88887643
No 272
>3nvb_A Uncharacterized protein; protein FKBH, protein fkbhstructural genomics, PSI-2, protei structure initiative; 1.71A {Bacteroides fragilis} PDB: 3slr_A
Probab=32.63 E-value=1.4e+02 Score=27.70 Aligned_cols=24 Identities=29% Similarity=0.278 Sum_probs=18.0
Q ss_pred CCCCCeeEEEEEeCCchHHHHHHH
Q 024345 124 DIDPKYKVAVLASKQEHCLVDFLY 147 (269)
Q Consensus 124 ~~~~~~riav~~Sg~g~~l~~ll~ 147 (269)
+.-++.||||+++..-..+.+.|.
T Consensus 18 ~~~~~~riavlg~~T~~~l~~~l~ 41 (387)
T 3nvb_A 18 VSLPKLKVALLGDTATQLLATAIK 41 (387)
T ss_dssp SSSCEEEEEEEESSCCHHHHHHHH
T ss_pred CCCceEEEEEeccchHHHHHHHHH
Confidence 455778999999998766666554
No 273
>1sur_A PAPS reductase; assimilatory sulfate reduction, 3-phospho-adenylyl-sulfate reductase, oxidoreductase; 2.00A {Escherichia coli} SCOP: c.26.2.2
Probab=32.60 E-value=56 Score=26.95 Aligned_cols=56 Identities=5% Similarity=-0.014 Sum_probs=36.1
Q ss_pred eeEEEEEeCCc--hHHHHHHHhhhcCCCCceEEEEeeCCCCCC---ChhHHHHHHhCCCCeEEeCC
Q 024345 129 YKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGP---NSHVIRFLERHGIPYHYLCA 189 (269)
Q Consensus 129 ~riav~~Sg~g--~~l~~ll~~~~~g~l~~~i~~Visn~~~~~---~~~v~~~a~~~gIP~~~~~~ 189 (269)
.||+|-.||.- ..|..++... + .++.+|..|+.-.. ...+.++|+++|||++.+..
T Consensus 45 ~~v~Va~SGGkDS~vLL~ll~~~--~---~~v~~v~vd~g~~~~e~~~~v~~~~~~~gi~~~v~~~ 105 (215)
T 1sur_A 45 GEYVLSSSFGIQAAVSLHLVNQI--R---PDIPVILTDTGYLFPETYRFIDELTDKLKLNLKVYRA 105 (215)
T ss_dssp SEEEEECCCCTTHHHHHHHHHHH--S---TTCEEEEEECSCBCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEecCCHHHHHHHHHHHHh--C---CCCeEEEeeCCCCCHHHHHHHHHHHHHhCCcEEEEeC
Confidence 48999999864 4555555443 2 24555655553211 13688899999999998763
No 274
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=31.81 E-value=92 Score=26.33 Aligned_cols=75 Identities=11% Similarity=0.111 Sum_probs=39.6
Q ss_pred CeeEEEEEe-CC-c-hHHHHHHHhhhcCCCCceEEEEeeCCCCCC-ChhHHHH--HHhCCCCeEEeCCCCCchHHHHHHH
Q 024345 128 KYKVAVLAS-KQ-E-HCLVDFLYGWQEGKLPVEITCVISNHDRGP-NSHVIRF--LERHGIPYHYLCAKENEREEELLEL 201 (269)
Q Consensus 128 ~~riav~~S-g~-g-~~l~~ll~~~~~g~l~~~i~~Visn~~~~~-~~~v~~~--a~~~gIP~~~~~~~~~~~e~~l~~~ 201 (269)
++||.|.|. |. | +..+.|++ .| ++|.++.-+... . ......+ ....|+.+...+.. ..+.+.++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~---~g---~~V~~~~R~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~---d~~~l~~~ 73 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASIS---LG---HPTYVLFRPEVV-SNIDKVQMLLYFKQLGAKLIEASLD---DHQRLVDA 73 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHH---TT---CCEEEECCSCCS-SCHHHHHHHHHHHTTTCEEECCCSS---CHHHHHHH
T ss_pred CCEEEEEcCCcHHHHHHHHHHHh---CC---CcEEEEECCCcc-cchhHHHHHHHHHhCCeEEEeCCCC---CHHHHHHH
Confidence 568888874 43 3 45556655 35 566544332210 0 0111111 13457776665521 23467777
Q ss_pred hccCCEEEEEe
Q 024345 202 VQNTDFLVLAR 212 (269)
Q Consensus 202 l~~~Dlivla~ 212 (269)
++++|.+|.+.
T Consensus 74 ~~~~d~vi~~a 84 (313)
T 1qyd_A 74 LKQVDVVISAL 84 (313)
T ss_dssp HTTCSEEEECC
T ss_pred HhCCCEEEECC
Confidence 88999988643
No 275
>2pg3_A Queuosine biosynthesis protein QUEC; YP_049261.1, hypothetical protein, structural genomics, JOIN for structural genomics; 2.40A {Pectobacterium atrosepticum SCRI1043} SCOP: c.26.2.1
Probab=31.70 E-value=80 Score=26.25 Aligned_cols=55 Identities=11% Similarity=0.080 Sum_probs=34.9
Q ss_pred eeEEEEEeCCc-h-HHHHHHHhhhcCCCCceEEEEeeCCCCCC---ChhHHHHHHhCCCC-eEEeC
Q 024345 129 YKVAVLASKQE-H-CLVDFLYGWQEGKLPVEITCVISNHDRGP---NSHVIRFLERHGIP-YHYLC 188 (269)
Q Consensus 129 ~riav~~Sg~g-~-~l~~ll~~~~~g~l~~~i~~Visn~~~~~---~~~v~~~a~~~gIP-~~~~~ 188 (269)
.|++++.||.- | .+..++. +.+ .++.+|..+..-.. -..+.++|++.||| ++.++
T Consensus 3 ~kvvv~lSGG~DS~~~l~ll~--~~~---~~v~av~~~~g~~~~~e~~~a~~~a~~lgi~~~~vi~ 63 (232)
T 2pg3_A 3 KRAVVVFSGGQDSTTCLIQAL--QDY---DDVHCITFDYGQRHRAEIEVAQELSQKLGAAAHKVLD 63 (232)
T ss_dssp CEEEEECCSSHHHHHHHHHHH--HHC---SEEEEEEEESSSSCHHHHHHHHHHHHHHTCSEEEEEE
T ss_pred CCEEEEecCcHHHHHHHHHHH--HcC---CCEEEEEEECCCCCHHHHHHHHHHHHHhCCCceEEEe
Confidence 58999999974 3 3333333 234 46777765543101 12477889999999 88776
No 276
>2pbq_A Molybdenum cofactor biosynthesis MOG; molybdopterin, MPT, structural genomics, NPPSFA, national PR protein structural and functional analyses; 1.70A {Aquifex aeolicus} PDB: 2qq1_A 3mci_A 3mcj_A 3k6a_A* 2f7w_A 2f7y_A 2fuw_A
Probab=31.44 E-value=39 Score=27.70 Aligned_cols=14 Identities=14% Similarity=0.249 Sum_probs=10.4
Q ss_pred CCCeeEEEEEeCCc
Q 024345 126 DPKYKVAVLASKQE 139 (269)
Q Consensus 126 ~~~~riav~~Sg~g 139 (269)
.+++|++|+.+|+.
T Consensus 3 ~~~~rv~IistGdE 16 (178)
T 2pbq_A 3 EKKAVIGVVTISDR 16 (178)
T ss_dssp --CCEEEEEEECHH
T ss_pred CCCCEEEEEEeCCc
Confidence 36789999999874
No 277
>3k94_A Thiamin pyrophosphokinase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.10A {Geobacillus thermodenitrificans}
Probab=31.41 E-value=26 Score=30.12 Aligned_cols=59 Identities=12% Similarity=-0.053 Sum_probs=35.2
Q ss_pred EEEeeCCCCCCChhHHHHHHhCCCCeEEeC-CCC-CchHHHHHHHhc-cCCEEEEEe-cceeee
Q 024345 159 TCVISNHDRGPNSHVIRFLERHGIPYHYLC-AKE-NEREEELLELVQ-NTDFLVLAR-YMQVNR 218 (269)
Q Consensus 159 ~~Visn~~~~~~~~v~~~a~~~gIP~~~~~-~~~-~~~e~~l~~~l~-~~Dlivla~-y~~il~ 218 (269)
-.+|.+-|. -+..++++.++.|+++..++ .|+ ++.|.++..+++ +++-|++.| .+..+.
T Consensus 45 d~ivGD~DS-i~~~~~~~~~~~~~~i~~~p~eKD~TD~e~Al~~a~~~g~~~I~i~Ga~GGR~D 107 (223)
T 3k94_A 45 VRAFGDFDS-LPAEDVVKLQQAFPDLDVWPAEKDKTDMEIALDWAVEQTARCIRLFGATGGRLD 107 (223)
T ss_dssp SEEESCGGG-SCHHHHHHHHHHCTTCCEECCBTTBCHHHHHHHHHHTTCCSEEEEESCSSSSHH
T ss_pred CEEEeCccc-CCHHHHHHHHhcCCeEEECCCcCCCCHHHHHHHHHHHcCCCEEEEEcCCCCchh
Confidence 356777654 24567888888899999887 433 333444544555 555555444 444333
No 278
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A*
Probab=31.41 E-value=1.2e+02 Score=28.94 Aligned_cols=56 Identities=21% Similarity=0.145 Sum_probs=38.8
Q ss_pred eeEEEEEeCCc--hHHHHHHHhhhcCCCCceEEEEeeCCCCCC-C--hhHHHHHHhCCCCeEEeCC
Q 024345 129 YKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGP-N--SHVIRFLERHGIPYHYLCA 189 (269)
Q Consensus 129 ~riav~~Sg~g--~~l~~ll~~~~~g~l~~~i~~Visn~~~~~-~--~~v~~~a~~~gIP~~~~~~ 189 (269)
.|+++..||.- +.+..++.. .| .++.+|..++.-.+ + ..+.+.|+++|||++.++.
T Consensus 210 ~kvvvalSGGvDSsvla~ll~~--~g---~~v~av~vd~g~~~~~e~~~v~~~~~~lgi~~~vv~~ 270 (503)
T 2ywb_A 210 DRVLLAVSGGVDSSTLALLLAK--AG---VDHLAVFVDHGLLRLGEREEVEGALRALGVNLLVVDA 270 (503)
T ss_dssp SEEEEEECSSHHHHHHHHHHHH--HT---CEEEEEEEECSCSCTTHHHHHHHHHHHTTCCEEEEEC
T ss_pred ccEEEEecCCcchHHHHHHHHH--cC---CeEEEEEEeCCCCChHHHHHHHHHHHHhCCCEEEEEC
Confidence 69999999974 444444443 24 57888877653211 1 3588899999999999873
No 279
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=31.40 E-value=45 Score=26.99 Aligned_cols=14 Identities=0% Similarity=0.138 Sum_probs=11.0
Q ss_pred CCCeeEEEEEeCCc
Q 024345 126 DPKYKVAVLASKQE 139 (269)
Q Consensus 126 ~~~~riav~~Sg~g 139 (269)
.+++|++++.+|+.
T Consensus 11 ~~~~rv~Ii~tGdE 24 (169)
T 1y5e_A 11 PKEVRCKIVTISDT 24 (169)
T ss_dssp -CCCEEEEEEECSS
T ss_pred ccCCEEEEEEEcCc
Confidence 36689999999975
No 280
>3ecs_A Translation initiation factor EIF-2B subunit alpha; eukaryotic translation initiation factor 2balpha (EIF2balpha); 2.65A {Homo sapiens}
Probab=31.36 E-value=1.8e+02 Score=26.31 Aligned_cols=76 Identities=11% Similarity=0.158 Sum_probs=37.7
Q ss_pred EEEEeCCchHHHHHH-HhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhccCCEEEE
Q 024345 132 AVLASKQEHCLVDFL-YGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTDFLVL 210 (269)
Q Consensus 132 av~~Sg~g~~l~~ll-~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~~~Dlivl 210 (269)
.||.-+.......++ .+.++|. .++|. |.-.+|............+.|||+.+++.. .+..+++++|.+++
T Consensus 124 ~ILTh~~S~tv~~~l~~A~~~gk-~~~V~-v~EsrP~~qG~~la~~L~~~gI~vtli~Ds------a~~~~m~~vd~Viv 195 (315)
T 3ecs_A 124 TILTHAYSRVVLRVLEAAVAAKK-RFSVY-VTESQPDLSGKKMAKALCHLNVPVTVVLDA------AVGYIMEKADLVIV 195 (315)
T ss_dssp EEEECSCCHHHHHHHHHHHTTTC-CEEEE-EECCTTTTHHHHHHHHHHTTTCCEEEECGG------GHHHHGGGCSEEEE
T ss_pred EEEEcCCcHHHHHHHHHHHHcCC-eEEEE-EecCCCcchHHHHHHHHHHcCCCEEEEehh------HHHHHHHhCCEEEE
Confidence 344444434444444 4444553 34443 223343322334455566789999998721 23334446666555
Q ss_pred Eeccee
Q 024345 211 ARYMQV 216 (269)
Q Consensus 211 a~y~~i 216 (269)
|--+|
T Consensus 196 -GAd~i 200 (315)
T 3ecs_A 196 -GAEGV 200 (315)
T ss_dssp -ECSEE
T ss_pred -CceEE
Confidence 33344
No 281
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=31.16 E-value=1.6e+02 Score=25.94 Aligned_cols=35 Identities=23% Similarity=0.267 Sum_probs=21.0
Q ss_pred CCeeEEEEEeCCc-hH-HHHHHHhhhcCCCCceEEEEeeCC
Q 024345 127 PKYKVAVLASKQE-HC-LVDFLYGWQEGKLPVEITCVISNH 165 (269)
Q Consensus 127 ~~~riav~~Sg~g-~~-l~~ll~~~~~g~l~~~i~~Visn~ 165 (269)
+++||+|+|.|.. .. ....+.. .+ .+++++|+...
T Consensus 6 ~~~rvgiiG~G~~g~~~~~~~~~~--~~--~~~l~av~d~~ 42 (352)
T 3kux_A 6 DKIKVGLLGYGYASKTFHAPLIMG--TP--GLELAGVSSSD 42 (352)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHT--ST--TEEEEEEECSC
T ss_pred CCceEEEECCCHHHHHHHHHHHhh--CC--CcEEEEEECCC
Confidence 5689999999973 32 2233332 22 36888776543
No 282
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=31.15 E-value=23 Score=31.84 Aligned_cols=35 Identities=14% Similarity=0.255 Sum_probs=21.7
Q ss_pred CCeeEEEEE-eCC-chHHHHHHHhhhcCCCCceEEEEeeCC
Q 024345 127 PKYKVAVLA-SKQ-EHCLVDFLYGWQEGKLPVEITCVISNH 165 (269)
Q Consensus 127 ~~~riav~~-Sg~-g~~l~~ll~~~~~g~l~~~i~~Visn~ 165 (269)
.|+||++.| +|. |..+...+.. .+ ..++++++..+
T Consensus 20 ~~irV~V~Ga~GrMGr~i~~~v~~--~~--~~eLvg~vd~~ 56 (288)
T 3ijp_A 20 GSMRLTVVGANGRMGRELITAIQR--RK--DVELCAVLVRK 56 (288)
T ss_dssp -CEEEEESSTTSHHHHHHHHHHHT--CS--SEEEEEEBCCT
T ss_pred CCeEEEEECCCCHHHHHHHHHHHh--CC--CCEEEEEEecC
Confidence 668999998 666 4444333331 22 47899888765
No 283
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=31.08 E-value=1e+02 Score=26.33 Aligned_cols=80 Identities=8% Similarity=-0.063 Sum_probs=35.8
Q ss_pred CCCCCeeEEEEEeCCc---hHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHH
Q 024345 124 DIDPKYKVAVLASKQE---HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLE 200 (269)
Q Consensus 124 ~~~~~~riav~~Sg~g---~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~ 200 (269)
+..+.+||.|.|...+ +..+.|++ .| ++|.++.-+.++........+....++.++..+.. ..+.+.+
T Consensus 10 ~~~~~~~vlVTGatG~iG~~l~~~L~~---~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~---d~~~~~~ 80 (335)
T 1rpn_A 10 HGSMTRSALVTGITGQDGAYLAKLLLE---KG---YRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMA---DACSVQR 80 (335)
T ss_dssp -----CEEEEETTTSHHHHHHHHHHHH---TT---CEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTT---CHHHHHH
T ss_pred ccccCCeEEEECCCChHHHHHHHHHHH---CC---CeEEEEeCCCccccccchhhccccCceEEEECCCC---CHHHHHH
Confidence 3456678877766553 33344444 35 57765544332111111111111224555554421 2345666
Q ss_pred Hhc--cCCEEEEEe
Q 024345 201 LVQ--NTDFLVLAR 212 (269)
Q Consensus 201 ~l~--~~Dlivla~ 212 (269)
+++ ++|.||-..
T Consensus 81 ~~~~~~~d~Vih~A 94 (335)
T 1rpn_A 81 AVIKAQPQEVYNLA 94 (335)
T ss_dssp HHHHHCCSEEEECC
T ss_pred HHHHcCCCEEEECc
Confidence 666 589887543
No 284
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=30.91 E-value=57 Score=25.96 Aligned_cols=39 Identities=28% Similarity=0.428 Sum_probs=25.4
Q ss_pred HHHHhhhcCCCCceEEEEeeCCC--C-C---CC-hhHHHHHHhCCCCeEE
Q 024345 144 DFLYGWQEGKLPVEITCVISNHD--R-G---PN-SHVIRFLERHGIPYHY 186 (269)
Q Consensus 144 ~ll~~~~~g~l~~~i~~Visn~~--~-~---~~-~~v~~~a~~~gIP~~~ 186 (269)
++.+.+++| +|.+||-.++ . . ++ ..+++.|..++||+..
T Consensus 65 ~I~d~I~~g----eIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T 110 (134)
T 2xw6_A 65 QMGARVAEG----RILAVIFFRDPLTAQPHEPDVQALLRVCDVHGVPLAT 110 (134)
T ss_dssp HHHHHHHTT----CEEEEEEECCTTTCCTTSCCSHHHHHHHHHHTCCEEC
T ss_pred hHHHHHHCC----CccEEEEccCcccCCCccchHHHHHHHHHHcCCCeEc
Confidence 455555577 4666665544 1 1 22 3478889999999997
No 285
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=30.79 E-value=58 Score=28.49 Aligned_cols=67 Identities=10% Similarity=0.137 Sum_probs=35.0
Q ss_pred CCCCeeEEEEEeCC-chHH-HHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHh
Q 024345 125 IDPKYKVAVLASKQ-EHCL-VDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELV 202 (269)
Q Consensus 125 ~~~~~riav~~Sg~-g~~l-~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l 202 (269)
...++||+|+|.|. |..+ +.|.+ .| ++|. +.|++ ...+.+++ +.|+... . + ..+++
T Consensus 6 ~~~~~~IgiIG~G~mG~~~A~~l~~---~G---~~V~--~~dr~---~~~~~~~~-~~g~~~~--~----~----~~e~~ 63 (306)
T 3l6d_A 6 ESFEFDVSVIGLGAMGTIMAQVLLK---QG---KRVA--IWNRS---PGKAAALV-AAGAHLC--E----S----VKAAL 63 (306)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHH---TT---CCEE--EECSS---HHHHHHHH-HHTCEEC--S----S----HHHHH
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHH---CC---CEEE--EEeCC---HHHHHHHH-HCCCeec--C----C----HHHHH
Confidence 34568999999998 5444 33333 35 4543 45652 23333333 3465221 1 1 22334
Q ss_pred ccCCEEEEEec
Q 024345 203 QNTDFLVLARY 213 (269)
Q Consensus 203 ~~~Dlivla~y 213 (269)
+++|+|+++--
T Consensus 64 ~~aDvVi~~vp 74 (306)
T 3l6d_A 64 SASPATIFVLL 74 (306)
T ss_dssp HHSSEEEECCS
T ss_pred hcCCEEEEEeC
Confidence 46788887643
No 286
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=30.67 E-value=1.1e+02 Score=26.08 Aligned_cols=71 Identities=13% Similarity=0.073 Sum_probs=37.0
Q ss_pred CCeeEEEEEeCCc---hHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhc
Q 024345 127 PKYKVAVLASKQE---HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 203 (269)
Q Consensus 127 ~~~riav~~Sg~g---~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~ 203 (269)
.+|||.|.|...+ +..+.|++ .| ++|.++.-+.+ +. .++ ...++.++..+.. ..+.+.++++
T Consensus 12 ~~M~ilVtGatG~iG~~l~~~L~~---~g---~~V~~~~r~~~---~~--~~l-~~~~~~~~~~Dl~---d~~~~~~~~~ 76 (342)
T 2x4g_A 12 AHVKYAVLGATGLLGHHAARAIRA---AG---HDLVLIHRPSS---QI--QRL-AYLEPECRVAEML---DHAGLERALR 76 (342)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHH---TT---CEEEEEECTTS---CG--GGG-GGGCCEEEECCTT---CHHHHHHHTT
T ss_pred cCCEEEEECCCcHHHHHHHHHHHH---CC---CEEEEEecChH---hh--hhh-ccCCeEEEEecCC---CHHHHHHHHc
Confidence 4468877775443 33444444 34 57765544332 11 111 1236666655421 2345667777
Q ss_pred cCCEEEEEe
Q 024345 204 NTDFLVLAR 212 (269)
Q Consensus 204 ~~Dlivla~ 212 (269)
++|.||-+.
T Consensus 77 ~~d~vih~a 85 (342)
T 2x4g_A 77 GLDGVIFSA 85 (342)
T ss_dssp TCSEEEEC-
T ss_pred CCCEEEECC
Confidence 899887643
No 287
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=30.67 E-value=43 Score=28.83 Aligned_cols=30 Identities=20% Similarity=0.218 Sum_probs=18.0
Q ss_pred eeEEEEEeCC-chHHHHHHHhhhcCCCCceEEEEeeCC
Q 024345 129 YKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNH 165 (269)
Q Consensus 129 ~riav~~Sg~-g~~l~~ll~~~~~g~l~~~i~~Visn~ 165 (269)
+||+|+|.|. |..+-..+.. .| ++|. +.++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~--~G---~~V~--~~dr 32 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVK--AG---CSVT--IWNR 32 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TT---CEEE--EECS
T ss_pred CEEEEEeecHHHHHHHHHHHH--CC---CeEE--EEcC
Confidence 6999999998 5444333322 34 4554 4555
No 288
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=30.64 E-value=1.3e+02 Score=26.31 Aligned_cols=77 Identities=14% Similarity=0.261 Sum_probs=41.5
Q ss_pred CCeeEEEEEeCCc-hH-HHHHHHhhhcCCCCceEEEEeeCCCCCCC-hhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhc
Q 024345 127 PKYKVAVLASKQE-HC-LVDFLYGWQEGKLPVEITCVISNHDRGPN-SHVIRFLERHGIPYHYLCAKENEREEELLELVQ 203 (269)
Q Consensus 127 ~~~riav~~Sg~g-~~-l~~ll~~~~~g~l~~~i~~Visn~~~~~~-~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~ 203 (269)
+.++|.++..|.+ .+ ...+++.+... .++..|..... +. ..+.+.++++. .+.+.+.. +++.++++
T Consensus 156 ~~~~ILv~~GG~d~~~l~~~vl~~L~~~---~~i~vv~G~~~--~~~~~l~~~~~~~~-~v~v~~~~-----~~m~~~m~ 224 (282)
T 3hbm_A 156 KKYDFFICMGGTDIKNLSLQIASELPKT---KIISIATSSSN--PNLKKLQKFAKLHN-NIRLFIDH-----ENIAKLMN 224 (282)
T ss_dssp CCEEEEEECCSCCTTCHHHHHHHHSCTT---SCEEEEECTTC--TTHHHHHHHHHTCS-SEEEEESC-----SCHHHHHH
T ss_pred cCCeEEEEECCCchhhHHHHHHHHhhcC---CCEEEEECCCc--hHHHHHHHHHhhCC-CEEEEeCH-----HHHHHHHH
Confidence 3567877766664 33 34566665432 24544443321 22 23445555543 45554311 13667777
Q ss_pred cCCEEEEEecc
Q 024345 204 NTDFLVLARYM 214 (269)
Q Consensus 204 ~~Dlivla~y~ 214 (269)
.+|++|++|=+
T Consensus 225 ~aDlvI~~gG~ 235 (282)
T 3hbm_A 225 ESNKLIISASS 235 (282)
T ss_dssp TEEEEEEESSH
T ss_pred HCCEEEECCcH
Confidence 99999997643
No 289
>2gi4_A Possible phosphotyrosine protein phosphatase; low molecular weight, protein tyrosine phosphatase, bacterial phosphatase; NMR {Campylobacter jejuni}
Probab=30.61 E-value=1e+02 Score=24.53 Aligned_cols=81 Identities=14% Similarity=0.096 Sum_probs=45.8
Q ss_pred eeEEEEEeCCc---hHHHHHHHhhhcC-CC--CceEEEEeeCC---CCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHH
Q 024345 129 YKVAVLASKQE---HCLVDFLYGWQEG-KL--PVEITCVISNH---DRGPNSHVIRFLERHGIPYHYLCAKENEREEELL 199 (269)
Q Consensus 129 ~riav~~Sg~g---~~l~~ll~~~~~g-~l--~~~i~~Visn~---~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~ 199 (269)
+||.|..+|+- .-.+.++...-.+ .+ ..+|.--=+.. ...++..+.+.++++||++-..-++.- ++
T Consensus 2 ~~VLFVC~gNicRSpmAEai~~~~~~~~gl~~~~~v~SAGt~~~~~g~~~~~~a~~~l~~~Gid~s~~~ar~l--~~--- 76 (156)
T 2gi4_A 2 KKILFICLGNICRSPMAEFIMKDLVKKANLEKEFFINSAGTSGEHDGEGMHYGTKNKLAQLNIEHKNFTSKKL--TQ--- 76 (156)
T ss_dssp CEEEEECSSCSSHHHHHHHHHHHHHHHHTTTTTCEEEEEBSSCSSTTCCCCHHHHHHHHHTSCSCCCCCCCBC--CH---
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHhCCCCCcEEEEeeecCCcccCCCCCHHHHHHHHHcCCCccCCccccC--CH---
Confidence 58999999985 3445555543211 12 23443322221 112667899999999998754322211 11
Q ss_pred HHhccCCEEEEEecc
Q 024345 200 ELVQNTDFLVLARYM 214 (269)
Q Consensus 200 ~~l~~~Dlivla~y~ 214 (269)
+.++++|+|+...-.
T Consensus 77 ~d~~~~DlIi~Md~~ 91 (156)
T 2gi4_A 77 KLCDESDFLITMDNS 91 (156)
T ss_dssp HHHTTCSEEECCCHH
T ss_pred HHhccCCEEEEECCh
Confidence 123478999998643
No 290
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=30.34 E-value=65 Score=25.94 Aligned_cols=69 Identities=12% Similarity=0.130 Sum_probs=35.8
Q ss_pred eeEEEEEeCCc---hHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhccC
Q 024345 129 YKVAVLASKQE---HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNT 205 (269)
Q Consensus 129 ~riav~~Sg~g---~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~~~ 205 (269)
|||.|.|...+ ...+.|++ +| ++|.++.-+.++... . .++.++..|.. +..+.+.+.++++
T Consensus 1 M~ilItGatG~iG~~l~~~L~~---~g---~~V~~~~R~~~~~~~-----~---~~~~~~~~D~~--d~~~~~~~~~~~~ 64 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLST---TD---YQIYAGARKVEQVPQ-----Y---NNVKAVHFDVD--WTPEEMAKQLHGM 64 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTT---SS---CEEEEEESSGGGSCC-----C---TTEEEEECCTT--SCHHHHHTTTTTC
T ss_pred CeEEEECCCCHHHHHHHHHHHH---CC---CEEEEEECCccchhh-----c---CCceEEEeccc--CCHHHHHHHHcCC
Confidence 47777775543 33333333 34 577655443321110 0 45556655521 1134566677789
Q ss_pred CEEEEEec
Q 024345 206 DFLVLARY 213 (269)
Q Consensus 206 Dlivla~y 213 (269)
|.+|...-
T Consensus 65 d~vi~~ag 72 (219)
T 3dqp_A 65 DAIINVSG 72 (219)
T ss_dssp SEEEECCC
T ss_pred CEEEECCc
Confidence 99876543
No 291
>2is8_A Molybdopterin biosynthesis enzyme, MOAB; globular alpha/beta fold, structu genomics, NPPSFA; 1.64A {Thermus thermophilus} PDB: 3mch_A
Probab=30.27 E-value=45 Score=26.81 Aligned_cols=67 Identities=9% Similarity=0.123 Sum_probs=34.7
Q ss_pred CeeEEEEEeCCchHHHHHHHhhhcCCCCceEEEEeeCCCCCCC-hhHHHHHHhCCCCeEEeC-CCCCch--HHHHHHHhc
Q 024345 128 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPN-SHVIRFLERHGIPYHYLC-AKENER--EEELLELVQ 203 (269)
Q Consensus 128 ~~riav~~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~-~~v~~~a~~~gIP~~~~~-~~~~~~--e~~l~~~l~ 203 (269)
|+|++|+.+|+.- . .|+. .| .+ ..+.++.+++|+.+.... ..++.. .+.+.+.++
T Consensus 1 ~~~v~Ii~tGdEl-----~----~G~i--------~D----~n~~~l~~~l~~~G~~v~~~~iv~Dd~~~i~~~l~~~~~ 59 (164)
T 2is8_A 1 MFRVGILTVSDKG-----F----RGER--------QD----TTHLAIREVLAGGPFEVAAYELVPDEPPMIKKVLRLWAD 59 (164)
T ss_dssp CEEEEEEEECHHH-----H----HTSS--------CC----CHHHHHHHHHTTSSEEEEEEEEECSCHHHHHHHHHHHHH
T ss_pred CcEEEEEEEcCcc-----c----CCCc--------cc----chHHHHHHHHHHCCCeEeEEEEcCCCHHHHHHHHHHHHh
Confidence 4799999998751 1 2421 11 12 235666667777654432 111111 123334444
Q ss_pred --cCCEEEEEecce
Q 024345 204 --NTDFLVLARYMQ 215 (269)
Q Consensus 204 --~~Dlivla~y~~ 215 (269)
++|+|++.|=.-
T Consensus 60 ~~~~DlVittGG~g 73 (164)
T 2is8_A 60 REGLDLILTNGGTG 73 (164)
T ss_dssp TSCCSEEEEESCCS
T ss_pred cCCCCEEEEcCCCC
Confidence 478888876543
No 292
>3hhe_A Ribose-5-phosphate isomerase A; niaid, ssgcid, decode, SBRI, UW, STRU genomics, seattle structural genomics center for infectious; HET: 5RP; 2.30A {Bartonella henselae}
Probab=29.94 E-value=1.4e+02 Score=26.35 Aligned_cols=113 Identities=12% Similarity=0.086 Sum_probs=56.9
Q ss_pred EEEEeCCCCCCHHHHHHHHHhhhhhhccceeeeeecCCCCCeeEEEEEeCCc--hHHHHHHHhhhcCCCCceEEEEeeCC
Q 024345 88 SEFIFDPIKWPREQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNH 165 (269)
Q Consensus 88 ~~v~~p~~~~~~~~L~e~L~~la~el~l~~~~~~~~~~~~~~riav~~Sg~g--~~l~~ll~~~~~g~l~~~i~~Visn~ 165 (269)
.....|. ..+.++.+++....|-++ . +.-.+..++||+- .-.+.|-++.++| + ++. +|+|.
T Consensus 14 ~~~~~~~-~m~~~e~K~~iA~~A~~~-V-----------~dg~vIgLGsGST~~~~i~~L~~~~~~g-l--~It-vVttS 76 (255)
T 3hhe_A 14 AQTQGPG-SMNVQQLKKMAALKALEF-V-----------EDDMRLGIGSGSTVNEFIPLLGERVANG-L--RVT-CVATS 76 (255)
T ss_dssp ----------CHHHHHHHHHHHHHTT-C-----------CTTEEEEECCSHHHHHHHHHHHHHHHTT-C--CEE-EEESS
T ss_pred ecCCCCC-CCCHHHHHHHHHHHHHHh-C-----------CCCCEEEECCcHHHHHHHHHHHHhhccC-C--cEE-EEcCC
Confidence 3445564 566677777666666544 1 1124566676652 2223332333333 3 466 56665
Q ss_pred CCCCChhHHHHHHhCCCCeEEeCCCC--C---------ch---------HHHHH-HHhc--cCCEEEEEecceeee-ccc
Q 024345 166 DRGPNSHVIRFLERHGIPYHYLCAKE--N---------ER---------EEELL-ELVQ--NTDFLVLARYMQVNR-IRL 221 (269)
Q Consensus 166 ~~~~~~~v~~~a~~~gIP~~~~~~~~--~---------~~---------e~~l~-~~l~--~~Dlivla~y~~il~-l~~ 221 (269)
....++|+++|||+..++.-. . +. ..-+. +.+. .-.+||++.+.++.+ |-.
T Consensus 77 -----~~ta~~l~~~GI~l~~l~~~~~iD~afdGADeVD~~~~lIKGgG~al~rEKiva~~A~~~ivIaD~SK~v~~LG~ 151 (255)
T 3hhe_A 77 -----QYSEQLCHKFGVPISTLEKIPELDLDIDGADEIGPEMTLIKGGGGALLHEKIVASASRAMFVIADETKMVKTLGA 151 (255)
T ss_dssp -----HHHHHHHHHTTCCBCCTTTCCSBSEEEECCSEECGGGCEECCTTSCHHHHHHHHHTBSCEEEEEEGGGBCSSSCS
T ss_pred -----HHHHHHHHHcCCcEEecccccccCEEEECCCccccccCeeeCchhhhHHHHHHHHhcCcEEEEEeCCCChhhhCC
Confidence 246888999999988765211 0 00 01111 2222 568899999988766 444
Q ss_pred c
Q 024345 222 Y 222 (269)
Q Consensus 222 ~ 222 (269)
|
T Consensus 152 ~ 152 (255)
T 3hhe_A 152 F 152 (255)
T ss_dssp S
T ss_pred C
Confidence 4
No 293
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=29.90 E-value=1.8e+02 Score=26.07 Aligned_cols=94 Identities=16% Similarity=0.201 Sum_probs=55.1
Q ss_pred CHHHHHHHHHhhhhhhccceeeeeecCCCCCeeEEEEEeCC-chHHHHHHHhhhcCCC-CceEEEEeeCCCC-CCChhHH
Q 024345 98 PREQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQ-EHCLVDFLYGWQEGKL-PVEITCVISNHDR-GPNSHVI 174 (269)
Q Consensus 98 ~~~~L~e~L~~la~el~l~~~~~~~~~~~~~~riav~~Sg~-g~~l~~ll~~~~~g~l-~~~i~~Visn~~~-~~~~~v~ 174 (269)
.+.+.-.+|..+-+.+|- -...||+++|-+. +.....++..+. .+ +.++. ++.|+. .++..+.
T Consensus 131 HPtQ~LaDl~Ti~e~~g~----------l~glkva~vGD~~~~rva~Sl~~~~~--~~~G~~v~--~~~P~~~~~~~~~~ 196 (306)
T 4ekn_B 131 HPTQTLLDLYTIMREIGR----------IDGIKIAFVGDLKYGRTVHSLVYALS--LFENVEMY--FVSPKELRLPKDII 196 (306)
T ss_dssp CHHHHHHHHHHHHHHHSC----------STTCEEEEESCTTTCHHHHHHHHHHH--TSSSCEEE--EECCGGGCCCHHHH
T ss_pred CcHHHHHHHHHHHHHhCC----------cCCCEEEEEcCCCCCcHHHHHHHHHH--hcCCCEEE--EECCcccccCHHHH
Confidence 344444455555555541 1457999999875 344445554432 23 35543 443432 2456788
Q ss_pred HHHHhCCCCeEEeCCCCCchHHHHHHHhccCCEEEEEec
Q 024345 175 RFLERHGIPYHYLCAKENEREEELLELVQNTDFLVLARY 213 (269)
Q Consensus 175 ~~a~~~gIP~~~~~~~~~~~e~~l~~~l~~~Dlivla~y 213 (269)
+.|++.|..+..... +.+.++++|+|.+-.|
T Consensus 197 ~~~~~~g~~~~~~~d--------~~eav~~aDvvy~~~~ 227 (306)
T 4ekn_B 197 EDLKAKNIKFYEKES--------LDDLDDDIDVLYVTRI 227 (306)
T ss_dssp HHHHHTTCCEEEESC--------GGGCCTTCSEEEECCC
T ss_pred HHHHHcCCEEEEEcC--------HHHHhcCCCEEEeCCc
Confidence 889999998866541 1234558999987654
No 294
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=29.88 E-value=87 Score=28.37 Aligned_cols=81 Identities=11% Similarity=-0.003 Sum_probs=39.1
Q ss_pred CCeeEEEEEeCC-chHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeE----EeCCCCCchHHHHHHH
Q 024345 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYH----YLCAKENEREEELLEL 201 (269)
Q Consensus 127 ~~~riav~~Sg~-g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~----~~~~~~~~~e~~l~~~ 201 (269)
.+|||+|+|.|. |+.+-..+.. .| ++|.+ .+++ ...+.++.+....|.+ .++.+. ....++.+.
T Consensus 28 ~~mkI~VIGaG~mG~alA~~La~--~G---~~V~l--~~r~---~~~~~~i~~~~~~~~~l~g~~l~~~i-~~t~d~~ea 96 (356)
T 3k96_A 28 FKHPIAILGAGSWGTALALVLAR--KG---QKVRL--WSYE---SDHVDEMQAEGVNNRYLPNYPFPETL-KAYCDLKAS 96 (356)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHT--TT---CCEEE--ECSC---HHHHHHHHHHSSBTTTBTTCCCCTTE-EEESCHHHH
T ss_pred cCCeEEEECccHHHHHHHHHHHH--CC---CeEEE--EeCC---HHHHHHHHHcCCCcccCCCCccCCCe-EEECCHHHH
Confidence 457999999998 4555444432 34 45543 3341 2234444443321111 111000 000123345
Q ss_pred hccCCEEEEEecceeee
Q 024345 202 VQNTDFLVLARYMQVNR 218 (269)
Q Consensus 202 l~~~Dlivla~y~~il~ 218 (269)
++++|+|+++=-.+.+.
T Consensus 97 ~~~aDvVilaVp~~~~~ 113 (356)
T 3k96_A 97 LEGVTDILIVVPSFAFH 113 (356)
T ss_dssp HTTCCEEEECCCHHHHH
T ss_pred HhcCCEEEECCCHHHHH
Confidence 56899999875444443
No 295
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=29.81 E-value=30 Score=30.78 Aligned_cols=34 Identities=9% Similarity=0.122 Sum_probs=20.6
Q ss_pred CeeEEEEEeCC-chH-HHH-HHHhhhcCCCCceEEEEeeCC
Q 024345 128 KYKVAVLASKQ-EHC-LVD-FLYGWQEGKLPVEITCVISNH 165 (269)
Q Consensus 128 ~~riav~~Sg~-g~~-l~~-ll~~~~~g~l~~~i~~Visn~ 165 (269)
|+||+|+|.|. |.. ... ++.. .+ .+++++|+...
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~~~~~--~~--~~~l~av~d~~ 38 (345)
T 3f4l_A 2 VINCAFIGFGKSTTRYHLPYVLNR--KD--SWHVAHIFRRH 38 (345)
T ss_dssp CEEEEEECCSHHHHHHTHHHHTTC--TT--TEEEEEEECSS
T ss_pred ceEEEEEecCHHHHHHHHHHHHhc--CC--CeEEEEEEcCC
Confidence 58999999997 332 222 3321 11 37888777654
No 296
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=29.77 E-value=1.3e+02 Score=27.23 Aligned_cols=46 Identities=13% Similarity=0.008 Sum_probs=27.2
Q ss_pred CCeeEEEEEeCC-chHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCC
Q 024345 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP 183 (269)
Q Consensus 127 ~~~riav~~Sg~-g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP 183 (269)
..+||+|+|.|. |..+-..+.. .| .+|. +.++ +....+.|.+.|+.
T Consensus 7 ~~~kIgIIG~G~mG~slA~~L~~--~G---~~V~--~~dr----~~~~~~~a~~~G~~ 53 (341)
T 3ktd_A 7 ISRPVCILGLGLIGGSLLRDLHA--AN---HSVF--GYNR----SRSGAKSAVDEGFD 53 (341)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHH--TT---CCEE--EECS----CHHHHHHHHHTTCC
T ss_pred CCCEEEEEeecHHHHHHHHHHHH--CC---CEEE--EEeC----CHHHHHHHHHcCCe
Confidence 347899999987 4444333332 34 4543 4555 22345677888874
No 297
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=29.71 E-value=2e+02 Score=25.87 Aligned_cols=95 Identities=15% Similarity=0.212 Sum_probs=53.7
Q ss_pred CCHHHHHHHHHhhhhhhccceeeeeecCCCCCeeEEEEEeCC-chHHHHHHHhhhcCCC-CceEEEEeeCCCC-CCChhH
Q 024345 97 WPREQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQ-EHCLVDFLYGWQEGKL-PVEITCVISNHDR-GPNSHV 173 (269)
Q Consensus 97 ~~~~~L~e~L~~la~el~l~~~~~~~~~~~~~~riav~~Sg~-g~~l~~ll~~~~~g~l-~~~i~~Visn~~~-~~~~~v 173 (269)
..+.+.-.+|..+-+.+|- -...||+++|-+. +.....++..+. .+ +.++. ++.|+. .++..+
T Consensus 133 ~HPtQaLaDl~Ti~e~~g~----------l~gl~va~vGD~~~~rva~Sl~~~~~--~~~g~~v~--~~~P~~~~~~~~~ 198 (310)
T 3csu_A 133 QHPTQTLLDLFTIQETQGR----------LDNLHVAMVGDLKYGRTVHSLTQALA--KFDGNRFY--FIAPDALAMPQYI 198 (310)
T ss_dssp CCHHHHHHHHHHHHHHHSC----------SSSCEEEEESCTTTCHHHHHHHHHHH--TSSSCEEE--EECCGGGCCCHHH
T ss_pred CCchHHHHHHHHHHHHhCC----------cCCcEEEEECCCCCCchHHHHHHHHH--hCCCCEEE--EECCcccccCHHH
Confidence 3455555555555555541 1347899998874 344445554432 23 34543 444433 244557
Q ss_pred HHHHHhCCCCeEEeCCCCCchHHHHHHHhccCCEEEEEec
Q 024345 174 IRFLERHGIPYHYLCAKENEREEELLELVQNTDFLVLARY 213 (269)
Q Consensus 174 ~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~~~Dlivla~y 213 (269)
.+.|++.|..+..... +.+.++++|+|..-+|
T Consensus 199 ~~~~~~~g~~~~~~~d--------~~eav~~aDvvyt~~~ 230 (310)
T 3csu_A 199 LDMLDEKGIAWSLHSS--------IEEVMAEVDILYMTRV 230 (310)
T ss_dssp HHHHHHTTCCEEECSC--------GGGTTTTCSEEEECC-
T ss_pred HHHHHHcCCeEEEEcC--------HHHHhcCCCEEEECCc
Confidence 7889999988766431 1234557888887766
No 298
>1vq3_A Phosphoribosylformylglycinamidine synthase, PURS; TM1244, PURS SUB 6.3.5.3), structural genomics, joint center for structural JCSG; 1.90A {Thermotoga maritima} SCOP: d.284.1.1 PDB: 3d54_B*
Probab=29.70 E-value=1.7e+02 Score=21.79 Aligned_cols=61 Identities=10% Similarity=-0.004 Sum_probs=41.6
Q ss_pred cceEEEEEEcCCCcChH----HHHHHHHHhCCCe-EeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHhhhhhh
Q 024345 40 LTHGIHVFHCPDEVGIV----AKLSECIASRGGN-ILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMF 113 (269)
Q Consensus 40 ~~~~iItV~G~DrpGIV----a~VS~~La~~giN-I~dl~~~~~~~~g~F~m~~~v~~p~~~~~~~~L~e~L~~la~el 113 (269)
|+++.|.|. -|||+. .+|.+.|...|.+ +.++++ |.++ .++++.+ +.++-++..+++|+++
T Consensus 15 ~~~~~V~V~--lKpgVlDPqG~aV~~aL~~LG~~~V~~VR~------GK~~-el~~~~~----~~~~a~~~v~~mc~kL 80 (94)
T 1vq3_A 15 LFKFAIDVQ--YRSNVRDPRGETIERVLREEKGLPVKKLRL------GKSI-HLEVEAE----NKEKAYEIVKKACEEL 80 (94)
T ss_dssp EEEEEEEEE--ECTTSCCHHHHHHHHHHHHTTCCCEEEEEE------EEEE-EEEEECS----SHHHHHHHHHHHHHHT
T ss_pred eEEEEEEEE--ECCCCcCcHHHHHHHHHHHcCCCccceeee------eeEE-EEEecCC----CHHHHHHHHHHHHHHH
Confidence 445555544 367765 5788899999996 888887 3322 3444432 4667788899999988
No 299
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=29.62 E-value=62 Score=30.63 Aligned_cols=70 Identities=11% Similarity=0.105 Sum_probs=38.2
Q ss_pred eeEEEEEeCC-chHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCC-----eEEeCCCCCchHHHHHHHh
Q 024345 129 YKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP-----YHYLCAKENEREEELLELV 202 (269)
Q Consensus 129 ~riav~~Sg~-g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP-----~~~~~~~~~~~e~~l~~~l 202 (269)
|||+|+|.|. |..+-..+.. .| ++|. +.|+ ....+.++++++|.. +.... + -+++.+.+
T Consensus 2 MkIgVIG~G~mG~~lA~~La~--~G---~~V~--v~dr---~~~~~~~l~~~~g~~~~~~~i~~~~----~-~~e~v~~l 66 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAE--KG---FKVA--VFNR---TYSKSEEFMKANASAPFAGNLKAFE----T-MEAFAASL 66 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHH--TT---CCEE--EECS---SHHHHHHHHHHTTTSTTGGGEEECS----C-HHHHHHHB
T ss_pred CEEEEEChHHHHHHHHHHHHH--CC---CEEE--EEeC---CHHHHHHHHHhcCCCCCCCCeEEEC----C-HHHHHhcc
Confidence 6899999988 5665443432 45 4553 4555 234566666666632 11111 1 12344434
Q ss_pred ccCCEEEEEec
Q 024345 203 QNTDFLVLARY 213 (269)
Q Consensus 203 ~~~Dlivla~y 213 (269)
+++|+|+++--
T Consensus 67 ~~aDvVilaVp 77 (478)
T 1pgj_A 67 KKPRKALILVQ 77 (478)
T ss_dssp CSSCEEEECCC
T ss_pred cCCCEEEEecC
Confidence 46898888643
No 300
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi}
Probab=29.62 E-value=1.8e+02 Score=24.97 Aligned_cols=39 Identities=10% Similarity=0.047 Sum_probs=22.9
Q ss_pred HHHHHHHHhhhhhhccceee-eeecCCCCCeeEEEEEeCC
Q 024345 100 EQMDEDFFKLSKMFNAMRSV-VRVPDIDPKYKVAVLASKQ 138 (269)
Q Consensus 100 ~~L~e~L~~la~el~l~~~~-~~~~~~~~~~riav~~Sg~ 138 (269)
++.++...+.++++|-.... -+.....+..+|+++....
T Consensus 39 ~~tr~rV~~~~~~lgY~pn~~a~~l~~~~~~~Ig~i~~~~ 78 (344)
T 3kjx_A 39 DATRARVLAAAKELGYVPNKIAGALASNRVNLVAVIIPSL 78 (344)
T ss_dssp HHHHHHHHHHHHHHTCCCCCCCSCSTTSCCSEEEEEESCS
T ss_pred HHHHHHHHHHHHHhCCCCCHHHHHhhcCCCCEEEEEeCCC
Confidence 55677888888888753211 1111234456788887654
No 301
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=29.46 E-value=1.6e+02 Score=25.36 Aligned_cols=81 Identities=12% Similarity=0.094 Sum_probs=41.5
Q ss_pred eeEEEEEeCCc--hHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCe-EEeCCC-C--CchH------H
Q 024345 129 YKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPY-HYLCAK-E--NERE------E 196 (269)
Q Consensus 129 ~riav~~Sg~g--~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~-~~~~~~-~--~~~e------~ 196 (269)
|||.+++.... ..+..|++.+++.. ++++..+++..+ .....+..+.+|+++ +.++.. . .... .
T Consensus 1 mkIl~v~~~~~~~~~~~~l~~~L~~~g-~~~~~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (384)
T 1vgv_A 1 MKVLTVFGTRPEAIKMAPLVHALAKDP-FFEAKVCVTAQH---REMLDQVLKLFSIVPDYDLNIMQPGQGLTEITCRILE 76 (384)
T ss_dssp CEEEEEECSHHHHHHHHHHHHHHHHST-TCEEEEEECCSS---GGGGHHHHHHHTCCCSEECCCCSTTSCHHHHHHHHHH
T ss_pred CeEEEEecccHHHHHHHHHHHHHHhCC-CCceEEEEcCCC---HHHHHHHHHHcCCCCCcceecCCCCccHHHHHHHHHH
Confidence 58877643322 23456666655421 235555555442 222344555678876 444421 1 1001 2
Q ss_pred HHHHHhc--cCCEEEEEec
Q 024345 197 ELLELVQ--NTDFLVLARY 213 (269)
Q Consensus 197 ~l~~~l~--~~Dlivla~y 213 (269)
.+.+.++ +||+|++.+.
T Consensus 77 ~l~~~l~~~~pDvv~~~~~ 95 (384)
T 1vgv_A 77 GLKPILAEFKPDVVLVHGD 95 (384)
T ss_dssp HHHHHHHHHCCSEEEEETT
T ss_pred HHHHHHHHhCCCEEEEeCC
Confidence 3445555 8999999763
No 302
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=29.35 E-value=80 Score=27.63 Aligned_cols=71 Identities=15% Similarity=0.085 Sum_probs=38.2
Q ss_pred CeeEEEEEeCC--c-hHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhcc
Q 024345 128 KYKVAVLASKQ--E-HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQN 204 (269)
Q Consensus 128 ~~riav~~Sg~--g-~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~~ 204 (269)
++||.|.|... | +..+.|++ ++ .++|.++.-+.++ ...+....++.++..|.. ..++.+.+++++
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~---~~--g~~V~~~~r~~~~-----~~~~~~~~~v~~~~~Dl~--~d~~~~~~~~~~ 91 (372)
T 3slg_A 24 AKKVLILGVNGFIGHHLSKRILE---TT--DWEVFGMDMQTDR-----LGDLVKHERMHFFEGDIT--INKEWVEYHVKK 91 (372)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHH---HS--SCEEEEEESCCTT-----TGGGGGSTTEEEEECCTT--TCHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHh---CC--CCEEEEEeCChhh-----hhhhccCCCeEEEeCccC--CCHHHHHHHhcc
Confidence 46888777544 3 34444554 32 2577665443321 122223356777765522 123456666778
Q ss_pred CCEEEE
Q 024345 205 TDFLVL 210 (269)
Q Consensus 205 ~Dlivl 210 (269)
+|.||-
T Consensus 92 ~d~Vih 97 (372)
T 3slg_A 92 CDVILP 97 (372)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 999885
No 303
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=29.26 E-value=1.6e+02 Score=25.55 Aligned_cols=74 Identities=8% Similarity=0.115 Sum_probs=39.2
Q ss_pred CCCeeEEEEEeCCc-hHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhc-
Q 024345 126 DPKYKVAVLASKQE-HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ- 203 (269)
Q Consensus 126 ~~~~riav~~Sg~g-~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~- 203 (269)
.+-.+|+|.+.|.. ...-.++. +.+ ..+|.++-++.. =.+++++.|-.... +.+..+..+++.++..
T Consensus 162 ~~g~~VlV~GaG~~g~~a~~~a~--~~~--g~~Vi~~~~~~~------r~~~~~~~Ga~~~i-~~~~~~~~~~v~~~t~g 230 (348)
T 4eez_A 162 KPGDWQVIFGAGGLGNLAIQYAK--NVF--GAKVIAVDINQD------KLNLAKKIGADVTI-NSGDVNPVDEIKKITGG 230 (348)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHH--HTS--CCEEEEEESCHH------HHHHHHHTTCSEEE-EC-CCCHHHHHHHHTTS
T ss_pred CCCCEEEEEcCCCccHHHHHHHH--HhC--CCEEEEEECcHH------HhhhhhhcCCeEEE-eCCCCCHHHHhhhhcCC
Confidence 34568999887653 22222222 123 256766555442 26889999977654 4332233344555444
Q ss_pred -cCCEEEE
Q 024345 204 -NTDFLVL 210 (269)
Q Consensus 204 -~~Dlivl 210 (269)
.+|.++.
T Consensus 231 ~g~d~~~~ 238 (348)
T 4eez_A 231 LGVQSAIV 238 (348)
T ss_dssp SCEEEEEE
T ss_pred CCceEEEE
Confidence 4555554
No 304
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=29.20 E-value=13 Score=31.81 Aligned_cols=69 Identities=13% Similarity=0.208 Sum_probs=35.5
Q ss_pred CCeeEEEEEeCC-chHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhccC
Q 024345 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNT 205 (269)
Q Consensus 127 ~~~riav~~Sg~-g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~~~ 205 (269)
.++||++.|.|+ |..+..-+. .....+++++++.+.+.... ..-.|+|+...+ ++.+++++.
T Consensus 84 ~~~rV~IIGAG~~G~~La~~~~---~~~~g~~iVg~~D~dp~k~g------~~i~gv~V~~~~--------dl~eli~~~ 146 (215)
T 2vt3_A 84 EMTDVILIGVGNLGTAFLHYNF---TKNNNTKISMAFDINESKIG------TEVGGVPVYNLD--------DLEQHVKDE 146 (215)
T ss_dssp ---CEEEECCSHHHHHHHHCC---------CCEEEEEESCTTTTT------CEETTEEEEEGG--------GHHHHCSSC
T ss_pred CCCEEEEEccCHHHHHHHHHHh---cccCCcEEEEEEeCCHHHHH------hHhcCCeeechh--------hHHHHHHhC
Confidence 457899999997 444433111 11224789999987643111 123567776421 244555522
Q ss_pred CEEEEEe
Q 024345 206 DFLVLAR 212 (269)
Q Consensus 206 Dlivla~ 212 (269)
|.+++|-
T Consensus 147 D~ViIAv 153 (215)
T 2vt3_A 147 SVAILTV 153 (215)
T ss_dssp CEEEECS
T ss_pred CEEEEec
Confidence 8777763
No 305
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=29.07 E-value=62 Score=27.67 Aligned_cols=47 Identities=13% Similarity=0.010 Sum_probs=24.6
Q ss_pred CeeEEEEEeCC-chHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCC
Q 024345 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP 183 (269)
Q Consensus 128 ~~riav~~Sg~-g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP 183 (269)
++||+|+|.|. |..+-..+.. .|. ..+| ++.++ +....+.+.+.|+.
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~--~g~-~~~V--~~~d~----~~~~~~~~~~~g~~ 53 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKR--DHP-HYKI--VGYNR----SDRSRDIALERGIV 53 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--HCT-TSEE--EEECS----SHHHHHHHHHTTSC
T ss_pred cceEEEEeeCHHHHHHHHHHHh--CCC-CcEE--EEEcC----CHHHHHHHHHcCCc
Confidence 47999999988 4444333322 331 2454 34454 22233445557763
No 306
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=28.84 E-value=1.2e+02 Score=27.08 Aligned_cols=132 Identities=8% Similarity=0.006 Sum_probs=66.7
Q ss_pred CCCCeEEEEEEEEeCCCCCCHHHHHHHHH-hhhhhhccceeeeeecCCCCCeeEEEEEeCCc--hHHHHHHHhhhcCCCC
Q 024345 79 EKKNVFYSRSEFIFDPIKWPREQMDEDFF-KLSKMFNAMRSVVRVPDIDPKYKVAVLASKQE--HCLVDFLYGWQEGKLP 155 (269)
Q Consensus 79 ~~~g~F~m~~~v~~p~~~~~~~~L~e~L~-~la~el~l~~~~~~~~~~~~~~riav~~Sg~g--~~l~~ll~~~~~g~l~ 155 (269)
+.+|...+.+ + +.....+|.+-. .++.+. +- ....++++|+|+|.- ..++.|... .+ .
T Consensus 86 ~~tG~p~a~l-----d-~~~lT~~RTaA~s~laa~~-La--------~~~~~~v~iIGaG~~a~~~~~al~~~--~~--~ 146 (313)
T 3hdj_A 86 AADGRPLATC-----D-AGTLTRKRTAACTVLAAGA-LA--------RPRSSVLGLFGAGTQGAEHAAQLSAR--FA--L 146 (313)
T ss_dssp TTTCCEEEEE-----C-SHHHHHHHHHHHHHHHHHH-HS--------CTTCCEEEEECCSHHHHHHHHHHHHH--SC--C
T ss_pred CCCCCEEEEE-----c-CchhhhHHHHHHHHHHHHh-hc--------cCCCcEEEEECccHHHHHHHHHHHHh--CC--C
Confidence 3456555444 1 224667776444 333332 21 124479999999973 455555542 12 1
Q ss_pred ceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhccCCEEEEEecce--eeecc-cccccccccCCC
Q 024345 156 VEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTDFLVLARYMQ--VNRIR-LYVAQLFSCLVT 232 (269)
Q Consensus 156 ~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~~~Dlivla~y~~--il~l~-~~~~~~iN~~~~ 232 (269)
.+| .+.|+.+ ...-+.++.+++|+++...+ +-+.++++|+|+++--.. ++.-+ .-++..|+
T Consensus 147 ~~V--~v~~r~~-a~~la~~l~~~~g~~~~~~~---------~~eav~~aDIVi~aT~s~~pvl~~~~l~~G~~V~---- 210 (313)
T 3hdj_A 147 EAI--LVHDPYA-SPEILERIGRRCGVPARMAA---------PADIAAQADIVVTATRSTTPLFAGQALRAGAFVG---- 210 (313)
T ss_dssp CEE--EEECTTC-CHHHHHHHHHHHTSCEEECC---------HHHHHHHCSEEEECCCCSSCSSCGGGCCTTCEEE----
T ss_pred cEE--EEECCcH-HHHHHHHHHHhcCCeEEEeC---------HHHHHhhCCEEEEccCCCCcccCHHHcCCCcEEE----
Confidence 233 3666631 11222333345688876532 123445899999986432 22211 12345677
Q ss_pred ccccCCCCCCCCCc
Q 024345 233 EQLTVLNSSLGGIN 246 (269)
Q Consensus 233 ~iHpSLLP~~rG~~ 246 (269)
-..|.-|..+=..
T Consensus 211 -~vGs~~p~~~El~ 223 (313)
T 3hdj_A 211 -AIGSSLPHTRELD 223 (313)
T ss_dssp -ECCCSSTTCCCCC
T ss_pred -ECCCCCCchhhcC
Confidence 5555555554443
No 307
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=28.83 E-value=1.4e+02 Score=26.37 Aligned_cols=105 Identities=10% Similarity=0.001 Sum_probs=51.5
Q ss_pred EEeCCCCCCHHHHHHHHHhhhhhhccceeeeeecCCCCCeeEEEEEeCC-chHHHHHHHhhhcCCCCc-eEEEEeeCCCC
Q 024345 90 FIFDPIKWPREQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQ-EHCLVDFLYGWQEGKLPV-EITCVISNHDR 167 (269)
Q Consensus 90 v~~p~~~~~~~~L~e~L~~la~el~l~~~~~~~~~~~~~~riav~~Sg~-g~~l~~ll~~~~~g~l~~-~i~~Visn~~~ 167 (269)
+.+|+ +++.++-. .++.++--+...+ .....+..+|+|.++|. |...-.+++. .| + +|.++-.+.
T Consensus 140 ~~iP~-~l~~~~aa-~~~~~~ta~~al~----~~~~~~g~~VlV~GaG~vG~~aiqlak~--~G---a~~Vi~~~~~~-- 206 (356)
T 1pl8_A 140 YKLPD-NVTFEEGA-LIEPLSVGIHACR----RGGVTLGHKVLVCGAGPIGMVTLLVAKA--MG---AAQVVVTDLSA-- 206 (356)
T ss_dssp EECCT-TSCHHHHH-HHHHHHHHHHHHH----HHTCCTTCEEEEECCSHHHHHHHHHHHH--TT---CSEEEEEESCH--
T ss_pred EECcC-CCCHHHHH-hhchHHHHHHHHH----hcCCCCCCEEEEECCCHHHHHHHHHHHH--cC---CCEEEEECCCH--
Confidence 45786 77765532 2233332222211 11233456899988653 3444444443 34 4 565544433
Q ss_pred CCChhHHHHHHhCCCCeEEeCCCC---CchHHHHHHHhc-cCCEEEEEe
Q 024345 168 GPNSHVIRFLERHGIPYHYLCAKE---NEREEELLELVQ-NTDFLVLAR 212 (269)
Q Consensus 168 ~~~~~v~~~a~~~gIP~~~~~~~~---~~~e~~l~~~l~-~~Dlivla~ 212 (269)
.-.++|+++|..... +.+. .+..+++.+... ++|+++-+.
T Consensus 207 ----~~~~~a~~lGa~~vi-~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 250 (356)
T 1pl8_A 207 ----TRLSKAKEIGADLVL-QISKESPQEIARKVEGQLGCKPEVTIECT 250 (356)
T ss_dssp ----HHHHHHHHTTCSEEE-ECSSCCHHHHHHHHHHHHTSCCSEEEECS
T ss_pred ----HHHHHHHHhCCCEEE-cCcccccchHHHHHHHHhCCCCCEEEECC
Confidence 236889999987443 4221 011122333222 589887654
No 308
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=28.81 E-value=60 Score=26.49 Aligned_cols=68 Identities=18% Similarity=0.220 Sum_probs=36.8
Q ss_pred CeeEEEEEeCCc---hHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCC-CeEEeCCCCCchHHHHHHHhc
Q 024345 128 KYKVAVLASKQE---HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGI-PYHYLCAKENEREEELLELVQ 203 (269)
Q Consensus 128 ~~riav~~Sg~g---~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gI-P~~~~~~~~~~~e~~l~~~l~ 203 (269)
.|||.|.|...+ +..+.|++ +| ++|.++.-+. ....+ ....++ .++..|-. +++.+.++
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~---~G---~~V~~~~R~~-----~~~~~-~~~~~~~~~~~~Dl~-----~~~~~~~~ 83 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKN---KG---HEPVAMVRNE-----EQGPE-LRERGASDIVVANLE-----EDFSHAFA 83 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHH---TT---CEEEEEESSG-----GGHHH-HHHTTCSEEEECCTT-----SCCGGGGT
T ss_pred CCeEEEECCCChHHHHHHHHHHh---CC---CeEEEEECCh-----HHHHH-HHhCCCceEEEcccH-----HHHHHHHc
Confidence 467777776553 44455544 45 5665544332 12333 334577 77776632 23444555
Q ss_pred cCCEEEEEe
Q 024345 204 NTDFLVLAR 212 (269)
Q Consensus 204 ~~Dlivla~ 212 (269)
++|.+|...
T Consensus 84 ~~D~vi~~a 92 (236)
T 3e8x_A 84 SIDAVVFAA 92 (236)
T ss_dssp TCSEEEECC
T ss_pred CCCEEEECC
Confidence 889877554
No 309
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=28.68 E-value=1.5e+02 Score=24.68 Aligned_cols=72 Identities=7% Similarity=-0.112 Sum_probs=38.7
Q ss_pred HHHHHHHHHhhhhhhccceeeeeecCCCCCeeEEEEEeCCchHHHHHHHhhhcCCCCceEEEEeeCCCCCC-ChhHHHHH
Q 024345 99 REQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGP-NSHVIRFL 177 (269)
Q Consensus 99 ~~~L~e~L~~la~el~l~~~~~~~~~~~~~~riav~~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~-~~~v~~~a 177 (269)
...+.+.+++.+++.|. ++.++.+.+...-...++.+.... +-++|..+.+.. ..+..+.+
T Consensus 17 ~~~~~~gi~~~a~~~g~--------------~~~~~~~~~~~~~~~~i~~l~~~~----vdgiii~~~~~~~~~~~~~~~ 78 (306)
T 8abp_A 17 FQTEWKFADKAGKDLGF--------------EVIKIAVPDGEKTLNAIDSLAASG----AKGFVICTPDPKLGSAIVAKA 78 (306)
T ss_dssp HHHHHHHHHHHHHHHTE--------------EEEEEECCSHHHHHHHHHHHHHTT----CCEEEEECSCGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCC--------------EEEEeCCCCHHHHHHHHHHHHHcC----CCEEEEeCCCchhhHHHHHHH
Confidence 46677778887777763 444455543322223333322222 223333221101 13457889
Q ss_pred HhCCCCeEEeC
Q 024345 178 ERHGIPYHYLC 188 (269)
Q Consensus 178 ~~~gIP~~~~~ 188 (269)
.+.|||+..++
T Consensus 79 ~~~~iPvV~~~ 89 (306)
T 8abp_A 79 RGYDMKVIAVD 89 (306)
T ss_dssp HHTTCEEEEES
T ss_pred HHCCCcEEEeC
Confidence 99999999887
No 310
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=28.68 E-value=1.3e+02 Score=23.59 Aligned_cols=79 Identities=18% Similarity=0.283 Sum_probs=46.2
Q ss_pred eEEEEEeCCchHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhc---cCC
Q 024345 130 KVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ---NTD 206 (269)
Q Consensus 130 riav~~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~---~~D 206 (269)
.|.+..|.....|..+..-++.. ...++++.++.+....-.-++--++.|+.+..+..++. .-+.+-+..+ +.|
T Consensus 3 qifvvfssdpeilkeivreikrq--gvrvvllysdqdekrrrerleefekqgvdvrtvedked-frenireiwerypqld 79 (162)
T 2l82_A 3 QIFVVFSSDPEILKEIVREIKRQ--GVRVVLLYSDQDEKRRRERLEEFEKQGVDVRTVEDKED-FRENIREIWERYPQLD 79 (162)
T ss_dssp EEEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCSCHHHHHHHHHHHHTTTCEEEECCSHHH-HHHHHHHHHHHCTTCC
T ss_pred eEEEEecCCHHHHHHHHHHHHhC--CeEEEEEecCchHHHHHHHHHHHHHcCCceeeeccHHH-HHHHHHHHHHhCCCCc
Confidence 45556666678888888766655 36888888887421111223445678998888754321 1122333333 677
Q ss_pred EEEEE
Q 024345 207 FLVLA 211 (269)
Q Consensus 207 livla 211 (269)
++|..
T Consensus 80 vvviv 84 (162)
T 2l82_A 80 VVVIV 84 (162)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 77654
No 311
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=28.39 E-value=69 Score=23.55 Aligned_cols=72 Identities=21% Similarity=0.239 Sum_probs=33.7
Q ss_pred CeeEEEEEeCC-chHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHH-hccC
Q 024345 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLEL-VQNT 205 (269)
Q Consensus 128 ~~riav~~Sg~-g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~-l~~~ 205 (269)
+++|+|+|.|. |..+-..+.. .| +++.+ +... ..-.+.+.+.|..+...+.. + .+.+.+. ++++
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~--~g---~~v~~-~d~~-----~~~~~~~~~~~~~~~~~d~~--~-~~~l~~~~~~~~ 71 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHR--MG---HEVLA-VDIN-----EEKVNAYASYATHAVIANAT--E-ENELLSLGIRNF 71 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH--TT---CCCEE-EESC-----HHHHHTTTTTCSEEEECCTT--C-HHHHHTTTGGGC
T ss_pred CCcEEEECCCHHHHHHHHHHHH--CC---CEEEE-EeCC-----HHHHHHHHHhCCEEEEeCCC--C-HHHHHhcCCCCC
Confidence 45799999765 3333333322 34 45443 2222 11223334456655443321 1 2233332 3479
Q ss_pred CEEEEEec
Q 024345 206 DFLVLARY 213 (269)
Q Consensus 206 Dlivla~y 213 (269)
|+++.+.-
T Consensus 72 d~vi~~~~ 79 (144)
T 2hmt_A 72 EYVIVAIG 79 (144)
T ss_dssp SEEEECCC
T ss_pred CEEEECCC
Confidence 98887643
No 312
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=28.36 E-value=2.6e+02 Score=23.35 Aligned_cols=73 Identities=12% Similarity=0.067 Sum_probs=39.9
Q ss_pred CeeEEEEEeCCc---hHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhcc
Q 024345 128 KYKVAVLASKQE---HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQN 204 (269)
Q Consensus 128 ~~riav~~Sg~g---~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~~ 204 (269)
+++|.|.|...+ +..+.|++ .|. ++|.++.-++ ..... +.....|+.+...|.. +.+.+.+.+++
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~---~g~--~~V~~~~R~~---~~~~~-~~l~~~~~~~~~~D~~---d~~~l~~~~~~ 72 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLE---DGT--FKVRVVTRNP---RKKAA-KELRLQGAEVVQGDQD---DQVIMELALNG 72 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHH---HCS--SEEEEEESCT---TSHHH-HHHHHTTCEEEECCTT---CHHHHHHHHTT
T ss_pred CCEEEEECCCchHHHHHHHHHHh---cCC--ceEEEEEcCC---CCHHH-HHHHHCCCEEEEecCC---CHHHHHHHHhc
Confidence 467777776542 34455554 342 5666544333 12222 2223567777765522 23456677778
Q ss_pred CCEEEEEe
Q 024345 205 TDFLVLAR 212 (269)
Q Consensus 205 ~Dlivla~ 212 (269)
+|.++.+.
T Consensus 73 ~d~vi~~a 80 (299)
T 2wm3_A 73 AYATFIVT 80 (299)
T ss_dssp CSEEEECC
T ss_pred CCEEEEeC
Confidence 99988753
No 313
>1xng_A NH(3)-dependent NAD(+) synthetase; amidotransferase, ligase; HET: DND ATP; 1.70A {Helicobacter pylori} SCOP: c.26.2.1 PDB: 1xnh_A
Probab=28.22 E-value=1.7e+02 Score=24.95 Aligned_cols=57 Identities=12% Similarity=0.018 Sum_probs=37.1
Q ss_pred CeeEEEEEeCCc-hH-HHHHHHhhhcCCCCceEEEEeeCCCCCCC---hhHHHHHHhCCCCeEEeC
Q 024345 128 KYKVAVLASKQE-HC-LVDFLYGWQEGKLPVEITCVISNHDRGPN---SHVIRFLERHGIPYHYLC 188 (269)
Q Consensus 128 ~~riav~~Sg~g-~~-l~~ll~~~~~g~l~~~i~~Visn~~~~~~---~~v~~~a~~~gIP~~~~~ 188 (269)
..++++..||.- |. +-.++.. .+ +.++.++..+...... ..+.++|++.|||++.++
T Consensus 25 ~~~vvv~lSGGiDSsv~~~l~~~--~~--~~~v~av~~~~~~~~~~e~~~a~~~a~~lgi~~~~i~ 86 (268)
T 1xng_A 25 FKKVVYGLSGGLDSAVVGVLCQK--VF--KENAHALLMPSSVSMPENKTDALNLCEKFSIPYTEYS 86 (268)
T ss_dssp CCCEEEECCSSHHHHHHHHHHHH--HH--GGGEEEEECCCSSSCHHHHHHHHHHHHHHTCCEEECC
T ss_pred CCCEEEEccCcHHHHHHHHHHHH--hC--CCCEEEEEeCCCCCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 358999999974 43 3344432 22 3567777776531011 347889999999999987
No 314
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=28.22 E-value=93 Score=30.40 Aligned_cols=51 Identities=12% Similarity=0.053 Sum_probs=27.7
Q ss_pred eeEEEEEeCC-c-hHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCe
Q 024345 129 YKVAVLASKQ-E-HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPY 184 (269)
Q Consensus 129 ~riav~~Sg~-g-~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~ 184 (269)
+||+|+|.|. | +-.+.|.++..+-....++ ++.++ .+....+.|++.|+-+
T Consensus 55 KkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~V--iVg~r---~~sks~e~A~e~G~~v 107 (525)
T 3fr7_A 55 KQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVV--KIGLR---KGSKSFDEARAAGFTE 107 (525)
T ss_dssp SEEEEECCTTHHHHHHHHHHHHHHHTTCCCEE--EEEEC---TTCSCHHHHHHTTCCT
T ss_pred CEEEEEeEhHHHHHHHHHHHhcccccCCCCEE--EEEeC---CchhhHHHHHHCCCEE
Confidence 6999999998 4 4444554431111112343 33443 1223467788888753
No 315
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=28.16 E-value=1.7e+02 Score=24.78 Aligned_cols=22 Identities=9% Similarity=-0.159 Sum_probs=13.7
Q ss_pred HHHHHhccCCEEEEEecceeee
Q 024345 197 ELLELVQNTDFLVLARYMQVNR 218 (269)
Q Consensus 197 ~l~~~l~~~Dlivla~y~~il~ 218 (269)
+..+.++.+|.||++.=++..+
T Consensus 76 ~~~~~l~~aD~iv~~~P~y~~~ 97 (218)
T 3rpe_A 76 SEIENYLWADTIIYQMPAWWMG 97 (218)
T ss_dssp HHHHHHHHCSEEEEEEECBTTB
T ss_pred HHHHHHHhCCEEEEECChHhcc
Confidence 3455566888888876444433
No 316
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=28.10 E-value=86 Score=25.19 Aligned_cols=72 Identities=10% Similarity=0.138 Sum_probs=40.5
Q ss_pred CCCeeEEEEEeCCchHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeC-CCCCchHHHHHH----
Q 024345 126 DPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC-AKENEREEELLE---- 200 (269)
Q Consensus 126 ~~~~riav~~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~-~~~~~~e~~l~~---- 200 (269)
.+++|++|+..+.. ..+..+. .|+ +.+. ....+.++.+++|+.+.... -.++ .+++.+
T Consensus 13 ~~~~~v~iitvsd~-~~~~~~~---~g~--------i~D~---ng~~L~~~L~~~G~~v~~~~iV~Dd--~~~i~~al~~ 75 (178)
T 3iwt_A 13 PKSLNFYVITISTS-RYEKLLK---KEP--------IVDE---SGDIIKQLLIENGHKIIGYSLVPDD--KIKILKAFTD 75 (178)
T ss_dssp CCCCEEEEEEECHH-HHHHHHT---TCC--------CCCH---HHHHHHHHHHHTTCEEEEEEEECSC--HHHHHHHHHH
T ss_pred CCCCEEEEEEEcCC-Ccccccc---CCC--------CCcc---hHHHHHHHHHHCCCEEEEEEEeCCC--HHHHHHHHHH
Confidence 45689999988763 2222222 343 1111 12347788899999877544 2221 223332
Q ss_pred Hhc--cCCEEEEEecc
Q 024345 201 LVQ--NTDFLVLARYM 214 (269)
Q Consensus 201 ~l~--~~Dlivla~y~ 214 (269)
... ++|+|++.|=.
T Consensus 76 ~~a~~~~DlVittGG~ 91 (178)
T 3iwt_A 76 ALSIDEVDVIISTGGT 91 (178)
T ss_dssp HHTCTTCCEEEEESCC
T ss_pred HHhcCCCCEEEecCCc
Confidence 232 68999998743
No 317
>1zzg_A Glucose-6-phosphate isomerase; structural genomics, riken structural genomics/PR initiative, RSGI, NPPSFA; 1.95A {Thermus thermophilus}
Probab=28.05 E-value=41 Score=31.70 Aligned_cols=73 Identities=15% Similarity=0.140 Sum_probs=44.8
Q ss_pred CCCHHHHHHHHHhhhhhhccceeeeeecCCCCCeeEEEEEeCCchHHHHHH------Hhhh--cCC-CCceEEEEeeCCC
Q 024345 96 KWPREQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFL------YGWQ--EGK-LPVEITCVISNHD 166 (269)
Q Consensus 96 ~~~~~~L~e~L~~la~el~l~~~~~~~~~~~~~~riav~~Sg~g~~l~~ll------~~~~--~g~-l~~~i~~Visn~~ 166 (269)
+++.+.+.+.+..+ + ++.-+++.+|++|++.+.+. +.+. .|+ ....++ ++|++
T Consensus 100 n~dp~~~~~~l~~l----~------------~~~TlviviSKSGtT~ET~~~~~~ar~~l~~~~G~~~~~~~v-avT~~- 161 (415)
T 1zzg_A 100 HVEPEPILRLLRTL----D------------PRKTLVNAVSKSGSTAETLAGLAVFLKWLKAHLGEDWRRHLV-VTTDP- 161 (415)
T ss_dssp SCCHHHHHHHHHHS----C------------GGGEEEEEEESSSCCHHHHHHHHHHHHHHHHHHGGGGGGGEE-EEECS-
T ss_pred CCCHHHHHHHHhhC----C------------CCCEEEEEEeCCCCCHHHHHHHHHHHHHHHHhcCccccCeEE-EEeCC-
Confidence 56677776665543 1 22347889999995444332 1111 131 113454 45555
Q ss_pred CCCChhHHHHHHhCCCCeEEeC
Q 024345 167 RGPNSHVIRFLERHGIPYHYLC 188 (269)
Q Consensus 167 ~~~~~~v~~~a~~~gIP~~~~~ 188 (269)
+++++.+.|+++||+++.++
T Consensus 162 --~~s~L~~~a~~~Gi~~f~~~ 181 (415)
T 1zzg_A 162 --KEGPLRAFAEREGLKAFAIP 181 (415)
T ss_dssp --SSSHHHHHHHHHTCEEEECC
T ss_pred --CCChHHHHHHHhCCcEEEec
Confidence 46889999999999988876
No 318
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=28.02 E-value=91 Score=26.64 Aligned_cols=46 Identities=15% Similarity=0.152 Sum_probs=24.4
Q ss_pred CeeEEEEEe-CC-chHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCe
Q 024345 128 KYKVAVLAS-KQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPY 184 (269)
Q Consensus 128 ~~riav~~S-g~-g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~ 184 (269)
++||+|+|. |. |..+-..+.. .| ++|. +.++. ...+ +.+.+.|+.+
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~--~g---~~V~--~~~r~---~~~~-~~~~~~g~~~ 58 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHD--SA---HHLA--AIEIA---PEGR-DRLQGMGIPL 58 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHH--SS---SEEE--EECCS---HHHH-HHHHHTTCCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHh--CC---CEEE--EEECC---HHHH-HHHHhcCCCc
Confidence 479999999 87 5444333321 34 4554 45552 2223 3344467644
No 319
>3k9c_A Transcriptional regulator, LACI family protein; PSI-II, 11026W, structural genomics, PR structure initiative; 2.14A {Rhodococcus jostii}
Probab=27.87 E-value=2.3e+02 Score=23.51 Aligned_cols=71 Identities=10% Similarity=0.039 Sum_probs=39.6
Q ss_pred HHHHHHHHHhhhhhhccceeeeeecCCCCCeeEEEEEeCCchHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHH
Q 024345 99 REQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLE 178 (269)
Q Consensus 99 ~~~L~e~L~~la~el~l~~~~~~~~~~~~~~riav~~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~ 178 (269)
..++.+.+++.+++.|. ++.++.+.....-...++.+... .+-++|..... .+....+.+.
T Consensus 26 ~~~~~~gi~~~a~~~g~--------------~~~~~~~~~~~~~~~~~~~l~~~----~vdgiIi~~~~-~~~~~~~~~~ 86 (289)
T 3k9c_A 26 HGDLVEQIYAAATRRGY--------------DVMLSAVAPSRAEKVAVQALMRE----RCEAAILLGTR-FDTDELGALA 86 (289)
T ss_dssp HHHHHHHHHHHHHHTTC--------------EEEEEEEBTTBCHHHHHHHHTTT----TEEEEEEETCC-CCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCC--------------EEEEEeCCCCHHHHHHHHHHHhC----CCCEEEEECCC-CCHHHHHHHH
Confidence 56777778887777763 34444444422133334433233 34454443322 2345666676
Q ss_pred hCCCCeEEeCC
Q 024345 179 RHGIPYHYLCA 189 (269)
Q Consensus 179 ~~gIP~~~~~~ 189 (269)
+ |||+..++.
T Consensus 87 ~-~iPvV~i~~ 96 (289)
T 3k9c_A 87 D-RVPALVVAR 96 (289)
T ss_dssp T-TSCEEEESS
T ss_pred c-CCCEEEEcC
Confidence 6 999999884
No 320
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=27.77 E-value=3e+02 Score=24.81 Aligned_cols=83 Identities=22% Similarity=0.245 Sum_probs=43.7
Q ss_pred CeeEEEEEeCCc--hHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCC-CeEEeCC--C-CCchH------
Q 024345 128 KYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGI-PYHYLCA--K-ENERE------ 195 (269)
Q Consensus 128 ~~riav~~Sg~g--~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gI-P~~~~~~--~-~~~~e------ 195 (269)
|+||++++.-.. ..+..|+.++++..-.+++..++|.... + -..+..+.+|| |-+.++- . .+-.+
T Consensus 27 ~~kI~~v~Gtr~~~~~~a~li~~l~~~~~~~~~~~~~tG~h~--~-m~~~~~~~~~i~~~~~l~v~~~~~~~~~~~~~~~ 103 (403)
T 3ot5_A 27 KIKVMSIFGTRPEAIKMAPLVLALEKEPETFESTVVITAQHR--E-MLDQVLEIFDIKPDIDLDIMKKGQTLAEITSRVM 103 (403)
T ss_dssp CEEEEEEECSHHHHHHHHHHHHHHHTCTTTEEEEEEECC--------CHHHHHHTTCCCSEECCCCC-CCCHHHHHHHHH
T ss_pred cceEEEEEecChhHHHHHHHHHHHHhCCCCCcEEEEEecCcH--H-HHHHHHHhcCCCCCcccccCCCCCCHHHHHHHHH
Confidence 358876664442 4556667776653112677667776421 1 12344578999 4344441 1 11111
Q ss_pred HHHHHHhc--cCCEEEEEec
Q 024345 196 EELLELVQ--NTDFLVLARY 213 (269)
Q Consensus 196 ~~l~~~l~--~~Dlivla~y 213 (269)
.++.+.++ +||++++.|.
T Consensus 104 ~~l~~~l~~~kPD~Vi~~gd 123 (403)
T 3ot5_A 104 NGINEVIAAENPDIVLVHGD 123 (403)
T ss_dssp HHHHHHHHHHCCSEEEEETT
T ss_pred HHHHHHHHHcCCCEEEEECC
Confidence 23444555 8999999874
No 321
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=27.67 E-value=23 Score=32.44 Aligned_cols=73 Identities=15% Similarity=0.142 Sum_probs=37.6
Q ss_pred cCCCCCeeEEEEEeCC-ch-HHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHH
Q 024345 123 PDIDPKYKVAVLASKQ-EH-CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLE 200 (269)
Q Consensus 123 ~~~~~~~riav~~Sg~-g~-~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~ 200 (269)
+..++.+||+|+|+|. |. ..+.|.+ . .+| .+.++. ...+.+++++. ....++. ...+++.+
T Consensus 11 ~~~~~~~~v~IiGaG~iG~~ia~~L~~----~---~~V--~V~~R~---~~~a~~la~~~--~~~~~d~---~~~~~l~~ 73 (365)
T 2z2v_A 11 HIEGRHMKVLILGAGNIGRAIAWDLKD----E---FDV--YIGDVN---NENLEKVKEFA--TPLKVDA---SNFDKLVE 73 (365)
T ss_dssp -----CCEEEEECCSHHHHHHHHHHTT----T---SEE--EEEESC---HHHHHHHTTTS--EEEECCT---TCHHHHHH
T ss_pred cccCCCCeEEEEcCCHHHHHHHHHHHc----C---CeE--EEEECC---HHHHHHHHhhC--CeEEEec---CCHHHHHH
Confidence 3467889999999986 33 3333332 1 344 355552 33445555443 2233332 12345667
Q ss_pred HhccCCEEEEEe
Q 024345 201 LVQNTDFLVLAR 212 (269)
Q Consensus 201 ~l~~~Dlivla~ 212 (269)
+++++|+||.+.
T Consensus 74 ll~~~DvVIn~~ 85 (365)
T 2z2v_A 74 VMKEFELVIGAL 85 (365)
T ss_dssp HHTTCSCEEECC
T ss_pred HHhCCCEEEECC
Confidence 777899988873
No 322
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=27.40 E-value=62 Score=28.52 Aligned_cols=72 Identities=26% Similarity=0.332 Sum_probs=35.4
Q ss_pred CCeeEEEEEeCC-chHHH-HHHHhhhcCCCC-ceEEEEeeCCCCCCC-hhHHHHHHhCCCCeEEeCCCCCchHHHHHHHh
Q 024345 127 PKYKVAVLASKQ-EHCLV-DFLYGWQEGKLP-VEITCVISNHDRGPN-SHVIRFLERHGIPYHYLCAKENEREEELLELV 202 (269)
Q Consensus 127 ~~~riav~~Sg~-g~~l~-~ll~~~~~g~l~-~~i~~Visn~~~~~~-~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l 202 (269)
.+|||+|+|.|. |..+- .|.+ .|..+ .+|. +.++. +. ..+.+ +.++|+.+. . +. .+.+
T Consensus 21 ~~mkI~iIG~G~mG~ala~~L~~---~G~~~~~~V~--v~~r~--~~~~~~~~-l~~~G~~~~--~----~~----~e~~ 82 (322)
T 2izz_A 21 QSMSVGFIGAGQLAFALAKGFTA---AGVLAAHKIM--ASSPD--MDLATVSA-LRKMGVKLT--P----HN----KETV 82 (322)
T ss_dssp -CCCEEEESCSHHHHHHHHHHHH---TTSSCGGGEE--EECSC--TTSHHHHH-HHHHTCEEE--S----CH----HHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHH---CCCCCcceEE--EECCC--ccHHHHHH-HHHcCCEEe--C----Ch----HHHh
Confidence 347999999988 54443 3333 45222 4553 44552 22 13333 345676432 1 11 1223
Q ss_pred ccCCEEEEEeccee
Q 024345 203 QNTDFLVLARYMQV 216 (269)
Q Consensus 203 ~~~Dlivla~y~~i 216 (269)
+++|+|+++=--+.
T Consensus 83 ~~aDvVilav~~~~ 96 (322)
T 2izz_A 83 QHSDVLFLAVKPHI 96 (322)
T ss_dssp HHCSEEEECSCGGG
T ss_pred ccCCEEEEEeCHHH
Confidence 36777777654433
No 323
>2lqj_A Mg2+ transport protein; ACT domain, membrane protein, regulation, HYDR; NMR {Mycobacterium tuberculosis}
Probab=27.37 E-value=1.9e+02 Score=21.31 Aligned_cols=80 Identities=8% Similarity=-0.056 Sum_probs=58.8
Q ss_pred ceEEEEEEcC--CCcChHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHhhhhhhcccee
Q 024345 41 THGIHVFHCP--DEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMRS 118 (269)
Q Consensus 41 ~~~iItV~G~--DrpGIVa~VS~~La~~giNI~dl~~~~~~~~g~F~m~~~v~~p~~~~~~~~L~e~L~~la~el~l~~~ 118 (269)
..|.+.|+|. +..-+=+.+.+.|.+.+.-+-++.+.... .+...+.+++... ..+..+|......++.+=+....
T Consensus 7 ~~Y~v~Vic~~~~e~~vR~lL~~~L~~~~~~l~~l~s~~~~-~~~veI~A~L~at--~~~~~~Le~iv~rLs~ep~V~~a 83 (94)
T 2lqj_A 7 QPYQVRVICRPKAETYVRAHIVQRTSSNDITLRGIRTGPAG-DDNITLTAHLLMV--GHTPAKLERLVAELSLQPGVYAV 83 (94)
T ss_dssp EEEEEEEEECHHHHHHHHHHHHHHHHHHTEEEEEEEEEECS-SSCEEEEEEEEEE--SCCHHHHHHHHHHHHHSTTEEEE
T ss_pred eEEEEEEEECcHHHHHHHHHHHHHHhcCCCceeEeeeecCC-CCeEEEEEEEEec--CCCHHHHHHHHHHHhCCCCeEEE
Confidence 4688888887 66778888999999999999999986433 5555455655533 45677888877777777776655
Q ss_pred eeeec
Q 024345 119 VVRVP 123 (269)
Q Consensus 119 ~~~~~ 123 (269)
.|+..
T Consensus 84 ~W~~~ 88 (94)
T 2lqj_A 84 HWYAG 88 (94)
T ss_dssp EEEES
T ss_pred EEEec
Confidence 77653
No 324
>1vbk_A Hypothetical protein PH1313; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Pyrococcus horikoshii} SCOP: c.26.2.6 d.308.1.1
Probab=27.33 E-value=86 Score=27.92 Aligned_cols=78 Identities=13% Similarity=0.046 Sum_probs=48.2
Q ss_pred CCeeEEEEEeCCc-hHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhC-------CCCeEEeCCCCCchHHHH
Q 024345 127 PKYKVAVLASKQE-HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERH-------GIPYHYLCAKENEREEEL 198 (269)
Q Consensus 127 ~~~riav~~Sg~g-~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~-------gIP~~~~~~~~~~~e~~l 198 (269)
...|++++.|| - |.. +.....+.| +++.++-.+-.......+.+.|+.. +||+++++. ..+.+
T Consensus 178 ~~~kvlvllSG-vDS~v-aa~ll~~~G---~~v~~v~~~~~~~~~~~a~~~a~~l~~~~~~~~i~~~vv~~----~~~~~ 248 (307)
T 1vbk_A 178 TEGRMIGILHD-ELSAL-AIFLMMKRG---VEVIPVYIGKDDKNLEKVRSLWNLLKRYSYGSKGFLVVAES----FDRVL 248 (307)
T ss_dssp TTCEEEEECSS-HHHHH-HHHHHHHBT---CEEEEEEESCSSHHHHHHHHHHHHHHTTCTTSCCCCEEESS----HHHHH
T ss_pred CCCcEEEEEeC-CcHHH-HHHHHHhCC---CeEEEEEEEECHHHHHHHHHHHHHHhhhccCCCCcEEEeCC----CHHHH
Confidence 34699999999 7 332 222233456 6888887773110012467777776 999999861 11122
Q ss_pred HHHhc--cCCEEEEEecc
Q 024345 199 LELVQ--NTDFLVLARYM 214 (269)
Q Consensus 199 ~~~l~--~~Dlivla~y~ 214 (269)
+..+ ++|.|+...|.
T Consensus 249 -~~A~~~ga~~I~tG~~~ 265 (307)
T 1vbk_A 249 -KLIRDFGVKGVIKGLRP 265 (307)
T ss_dssp -HHHHHHTCCEEECCCCG
T ss_pred -HHHHHcCCCEEEECccc
Confidence 3333 89999998774
No 325
>2vh7_A Acylphosphatase-1; hydrolase, acetylation; 1.45A {Homo sapiens} PDB: 2w4c_A 2w4p_A 2k7k_A 2k7j_A 2acy_A
Probab=27.25 E-value=1.6e+02 Score=21.60 Aligned_cols=57 Identities=9% Similarity=-0.118 Sum_probs=40.9
Q ss_pred HHHHHHHhhhhhhccceeeeeecCCCCCeeEEEEEeCCchHHHHHHHhhh-cCCCCceEEEE
Q 024345 101 QMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQ-EGKLPVEITCV 161 (269)
Q Consensus 101 ~L~e~L~~la~el~l~~~~~~~~~~~~~~riav~~Sg~g~~l~~ll~~~~-~g~l~~~i~~V 161 (269)
-+|--...+|.++++.=|+... .+. +|-+.+.|+...+.++++.++ .|.-.+.|.-|
T Consensus 22 GFR~~v~~~A~~lgL~G~V~N~--~dG--~Vei~~eG~~~~v~~f~~~l~~~~p~~a~V~~v 79 (99)
T 2vh7_A 22 FFRKHTQAEGKKLGLVGWVQNT--DRG--TVQGQLQGPISKVRHMQEWLETRGSPKSHIDKA 79 (99)
T ss_dssp CHHHHHHHHHHHTTCEEEEEEC--TTS--CEEEEEEEEHHHHHHHHHHHHHTCSTTCEEEEE
T ss_pred ChHHHHHHHHHHcCCcEEEEEC--CCC--CEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEE
Confidence 3788888899999998765432 233 677888888788999998886 45433666655
No 326
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=27.20 E-value=69 Score=28.59 Aligned_cols=35 Identities=11% Similarity=0.104 Sum_probs=21.4
Q ss_pred CCeeEEEEEeCCc-hH-HHHHHHhhhcCCCCceEEEEeeCC
Q 024345 127 PKYKVAVLASKQE-HC-LVDFLYGWQEGKLPVEITCVISNH 165 (269)
Q Consensus 127 ~~~riav~~Sg~g-~~-l~~ll~~~~~g~l~~~i~~Visn~ 165 (269)
+++||+|+|.|.. .. ....+.. .+ .+++++|+...
T Consensus 4 ~~~rvgiiG~G~~g~~~~~~~l~~--~~--~~~l~av~d~~ 40 (362)
T 3fhl_A 4 EIIKTGLAAFGMSGQVFHAPFIST--NP--HFELYKIVERS 40 (362)
T ss_dssp CCEEEEESCCSHHHHHTTHHHHHH--CT--TEEEEEEECSS
T ss_pred CceEEEEECCCHHHHHHHHHHHhh--CC--CeEEEEEEcCC
Confidence 5689999999873 32 2233332 22 37888776644
No 327
>2nz2_A Argininosuccinate synthase; amino-acid biosynthesis, aspartate, citrulline, ST genomics, structural genomics consortium, SGC, ligase; HET: CIR; 2.40A {Homo sapiens}
Probab=27.18 E-value=1.2e+02 Score=28.45 Aligned_cols=56 Identities=14% Similarity=0.133 Sum_probs=37.7
Q ss_pred CeeEEEEEeCCc--hHHHHHHHhhhcCCCCceEEEEeeCCCCC-CChhHHHHHHhCCCC-eEEeC
Q 024345 128 KYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRG-PNSHVIRFLERHGIP-YHYLC 188 (269)
Q Consensus 128 ~~riav~~Sg~g--~~l~~ll~~~~~g~l~~~i~~Visn~~~~-~~~~v~~~a~~~gIP-~~~~~ 188 (269)
+.||++..||.- +.+-.++.. .| .++.++..+.... .-..+.+.|++.||| ++.++
T Consensus 5 ~~kVvvalSGGlDSsvll~lL~e--~G---~eV~av~vd~g~~~e~e~a~~~A~~lGi~~~~vvd 64 (413)
T 2nz2_A 5 KGSVVLAYSGGLDTSCILVWLKE--QG---YDVIAYLANIGQKEDFEEARKKALKLGAKKVFIED 64 (413)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHH--TT---EEEEEEEEESSCCCCHHHHHHHHHHHTCSEEEEEE
T ss_pred CCeEEEEEcChHHHHHHHHHHHH--cC---CEEEEEEEECCcHHHHHHHHHHHHHhCCCEEEEEe
Confidence 469999999974 444444432 33 6788877765321 124688999999999 76654
No 328
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=27.07 E-value=48 Score=26.95 Aligned_cols=14 Identities=14% Similarity=0.157 Sum_probs=11.7
Q ss_pred CCCeeEEEEEeCCc
Q 024345 126 DPKYKVAVLASKQE 139 (269)
Q Consensus 126 ~~~~riav~~Sg~g 139 (269)
.+++|++|+.+|+.
T Consensus 8 ~~~~~v~Ii~tGdE 21 (172)
T 1mkz_A 8 FIPTRIAILTVSNR 21 (172)
T ss_dssp CCCCEEEEEEECSS
T ss_pred CCCCEEEEEEEeCC
Confidence 45689999999986
No 329
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=27.04 E-value=2e+02 Score=24.64 Aligned_cols=65 Identities=8% Similarity=-0.014 Sum_probs=32.0
Q ss_pred CCCeeEEEEEeCCc---hHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHh
Q 024345 126 DPKYKVAVLASKQE---HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELV 202 (269)
Q Consensus 126 ~~~~riav~~Sg~g---~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l 202 (269)
.+++||.|.|...+ +..+.|++ .| ++|.++.-+.+ . .++.++..+.. ..+.+.+++
T Consensus 17 ~~~~~vlVtGatG~iG~~l~~~L~~---~G---~~V~~~~r~~~---~---------~~~~~~~~Dl~---d~~~~~~~~ 75 (347)
T 4id9_A 17 RGSHMILVTGSAGRVGRAVVAALRT---QG---RTVRGFDLRPS---G---------TGGEEVVGSLE---DGQALSDAI 75 (347)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHH---TT---CCEEEEESSCC---S---------SCCSEEESCTT---CHHHHHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHh---CC---CEEEEEeCCCC---C---------CCccEEecCcC---CHHHHHHHH
Confidence 34567777766543 34444444 35 56765543321 1 45666655421 133455566
Q ss_pred ccCCEEEEE
Q 024345 203 QNTDFLVLA 211 (269)
Q Consensus 203 ~~~Dlivla 211 (269)
+++|.||-.
T Consensus 76 ~~~d~vih~ 84 (347)
T 4id9_A 76 MGVSAVLHL 84 (347)
T ss_dssp TTCSEEEEC
T ss_pred hCCCEEEEC
Confidence 677777643
No 330
>2gv1_A Probable acylphosphatase; globular alpha-helix/beta-sheet protein, hydrolase; NMR {Escherichia coli}
Probab=26.95 E-value=1.6e+02 Score=21.30 Aligned_cols=56 Identities=14% Similarity=0.048 Sum_probs=40.6
Q ss_pred HHHHHHhhhhhhccceeeeeecCCCCCeeEEEEEeCCchHHHHHHHhh-hcCCCCceEEEE
Q 024345 102 MDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGW-QEGKLPVEITCV 161 (269)
Q Consensus 102 L~e~L~~la~el~l~~~~~~~~~~~~~~riav~~Sg~g~~l~~ll~~~-~~g~l~~~i~~V 161 (269)
+|--...+|.++++.=|+... .+. +|-+.+.|+...+.++++.+ +.|.-.+.|.-+
T Consensus 19 FR~~v~~~A~~lgL~G~V~N~--~dG--~Vei~~eG~~~~i~~f~~~l~~~gP~~a~V~~v 75 (92)
T 2gv1_A 19 FRYTTQYEAKRLGLTGYAKNL--DDG--SVEVVACGEEGQVEKLMQWLKSGGPRSARVERV 75 (92)
T ss_dssp CCSHHHHHHHHHTCCCEEEEC--SSS--CEEEEECSCHHHHHHHHHHHHHTSSTTSEEEEE
T ss_pred HHHHHHHHHHHcCCeEEEEEC--CCC--cEEEEEEeCHHHHHHHHHHhhccCCCceEEEEE
Confidence 456667789999987765432 222 78889999888899999988 777433677665
No 331
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=26.87 E-value=2e+02 Score=23.93 Aligned_cols=72 Identities=7% Similarity=0.030 Sum_probs=39.0
Q ss_pred HHHHHHHHHhhhhhhccceeeeeecCCCCCeeEEEEEeCCc-hHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHH
Q 024345 99 REQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQE-HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFL 177 (269)
Q Consensus 99 ~~~L~e~L~~la~el~l~~~~~~~~~~~~~~riav~~Sg~g-~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a 177 (269)
..++.+.+++.+++.|. ++.++.+... ..-..+++.+.... +-++|..... .+....+.+
T Consensus 27 ~~~~~~gi~~~a~~~g~--------------~~~~~~~~~~~~~~~~~~~~l~~~~----vdGiI~~~~~-~~~~~~~~l 87 (295)
T 3hcw_A 27 YINVLLGISETCNQHGY--------------GTQTTVSNNMNDLMDEVYKMIKQRM----VDAFILLYSK-ENDPIKQML 87 (295)
T ss_dssp HHHHHHHHHHHHHTTTC--------------EEEECCCCSHHHHHHHHHHHHHTTC----CSEEEESCCC-TTCHHHHHH
T ss_pred HHHHHHHHHHHHHHCCC--------------EEEEEcCCCChHHHHHHHHHHHhCC----cCEEEEcCcc-cChHHHHHH
Confidence 35566666666666652 3444444432 22233444443332 3333332221 234677888
Q ss_pred HhCCCCeEEeCC
Q 024345 178 ERHGIPYHYLCA 189 (269)
Q Consensus 178 ~~~gIP~~~~~~ 189 (269)
.+.|||+..++.
T Consensus 88 ~~~~iPvV~i~~ 99 (295)
T 3hcw_A 88 IDESMPFIVIGK 99 (295)
T ss_dssp HHTTCCEEEESC
T ss_pred HhCCCCEEEECC
Confidence 999999999873
No 332
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, STR genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus}
Probab=26.86 E-value=1.8e+02 Score=24.38 Aligned_cols=72 Identities=8% Similarity=0.057 Sum_probs=39.9
Q ss_pred HHHHHHHHHhhhhhhccceeeeeecCCCCCeeEEEEEeCCc-hHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHH
Q 024345 99 REQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQE-HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFL 177 (269)
Q Consensus 99 ~~~L~e~L~~la~el~l~~~~~~~~~~~~~~riav~~Sg~g-~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a 177 (269)
...+.+.+++.+++.|. ++.++.+... .....+++.+.... +-++|..... .+.+..+.+
T Consensus 42 ~~~~~~gi~~~a~~~g~--------------~~~~~~~~~~~~~~~~~~~~l~~~~----vdgiIi~~~~-~~~~~~~~l 102 (305)
T 3huu_A 42 NSDVLNGINQACNVRGY--------------STRMTVSENSGDLYHEVKTMIQSKS----VDGFILLYSL-KDDPIEHLL 102 (305)
T ss_dssp HHHHHHHHHHHHHHHTC--------------EEEECCCSSHHHHHHHHHHHHHTTC----CSEEEESSCB-TTCHHHHHH
T ss_pred HHHHHHHHHHHHHHCCC--------------EEEEEeCCCChHHHHHHHHHHHhCC----CCEEEEeCCc-CCcHHHHHH
Confidence 45666777777777763 3333334332 22234444443342 3333332211 234678888
Q ss_pred HhCCCCeEEeCC
Q 024345 178 ERHGIPYHYLCA 189 (269)
Q Consensus 178 ~~~gIP~~~~~~ 189 (269)
.+.|||+..++.
T Consensus 103 ~~~~iPvV~i~~ 114 (305)
T 3huu_A 103 NEFKVPYLIVGK 114 (305)
T ss_dssp HHTTCCEEEESC
T ss_pred HHcCCCEEEECC
Confidence 999999999884
No 333
>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A
Probab=26.74 E-value=3.1e+02 Score=25.70 Aligned_cols=88 Identities=14% Similarity=0.076 Sum_probs=50.8
Q ss_pred CCCCeeEEEEEeCCchHHH-HHHHhhhcCCCCceEEEEeeCCCCCCC----------hhHHHHHHhCCCCeEEeCCCCCc
Q 024345 125 IDPKYKVAVLASKQEHCLV-DFLYGWQEGKLPVEITCVISNHDRGPN----------SHVIRFLERHGIPYHYLCAKENE 193 (269)
Q Consensus 125 ~~~~~riav~~Sg~g~~l~-~ll~~~~~g~l~~~i~~Visn~~~~~~----------~~v~~~a~~~gIP~~~~~~~~~~ 193 (269)
...++|+.|.|..+|.-+- ++.-+.+.| +.+.+|--.++.... ..+.+.+++.|.....++..-.+
T Consensus 47 ~~~pK~vLVtGaSsGiGlA~AialAf~~G---A~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d 123 (401)
T 4ggo_A 47 AKAPKNVLVLGCSNGYGLASRITAAFGYG---AATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFS 123 (401)
T ss_dssp SCCCCEEEEESCSSHHHHHHHHHHHHHHC---CEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTS
T ss_pred cCCCCEEEEECCCCcHHHHHHHHHHhhCC---CCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCC
Confidence 4567899999999885543 222222345 566655544432111 23667889999998877633222
Q ss_pred hH--HHHHHHhc----cCCEEEE-Eecce
Q 024345 194 RE--EELLELVQ----NTDFLVL-ARYMQ 215 (269)
Q Consensus 194 ~e--~~l~~~l~----~~Dlivl-a~y~~ 215 (269)
.| +++++.++ +.|++|- ++|..
T Consensus 124 ~e~i~~vi~~i~~~~G~IDiLVhS~A~~~ 152 (401)
T 4ggo_A 124 DEIKAQVIEEAKKKGIKFDLIVYSLASPV 152 (401)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEECCCCSE
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEeccccc
Confidence 22 33444444 6898774 45543
No 334
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=26.72 E-value=89 Score=26.61 Aligned_cols=63 Identities=10% Similarity=0.112 Sum_probs=32.6
Q ss_pred eeEEEEEeCC-chHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhccCCE
Q 024345 129 YKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTDF 207 (269)
Q Consensus 129 ~riav~~Sg~-g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~~~Dl 207 (269)
|||+|+|.|. |..+-..+.. .| ++|. +.+++ ...+ +.+.+.|+.+. . +.+ +.++++|+
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~--~g---~~V~--~~~~~---~~~~-~~~~~~g~~~~--~----~~~----~~~~~~Dv 59 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMK--HG---YPLI--IYDVF---PDAC-KEFQDAGEQVV--S----SPA----DVAEKADR 59 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHH--TT---CCEE--EECSS---THHH-HHHHTTTCEEC--S----SHH----HHHHHCSE
T ss_pred CeEEEEeccHHHHHHHHHHHH--CC---CEEE--EEeCC---HHHH-HHHHHcCCeec--C----CHH----HHHhcCCE
Confidence 5899999998 5544333322 34 4553 45552 2223 33445565321 1 111 23346788
Q ss_pred EEEEe
Q 024345 208 LVLAR 212 (269)
Q Consensus 208 ivla~ 212 (269)
|+++-
T Consensus 60 vi~~v 64 (296)
T 2gf2_A 60 IITML 64 (296)
T ss_dssp EEECC
T ss_pred EEEeC
Confidence 88874
No 335
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=26.58 E-value=73 Score=27.65 Aligned_cols=19 Identities=5% Similarity=0.081 Sum_probs=13.6
Q ss_pred CeeEEEEEeCC-chHHHHHH
Q 024345 128 KYKVAVLASKQ-EHCLVDFL 146 (269)
Q Consensus 128 ~~riav~~Sg~-g~~l~~ll 146 (269)
++||+|+|.|. |..+-..+
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l 34 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRM 34 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHH
T ss_pred CCeEEEECcCHHHHHHHHHH
Confidence 47999999998 55554333
No 336
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=26.22 E-value=1.2e+02 Score=25.64 Aligned_cols=19 Identities=21% Similarity=0.102 Sum_probs=12.8
Q ss_pred CeeEEEEEeCC-chHHHHHH
Q 024345 128 KYKVAVLASKQ-EHCLVDFL 146 (269)
Q Consensus 128 ~~riav~~Sg~-g~~l~~ll 146 (269)
|+||+|+|.|. |..+-..+
T Consensus 1 M~~i~iiG~G~~G~~~a~~l 20 (289)
T 2cvz_A 1 MEKVAFIGLGAMGYPMAGHL 20 (289)
T ss_dssp -CCEEEECCSTTHHHHHHHH
T ss_pred CCeEEEEcccHHHHHHHHHH
Confidence 36899999998 55554433
No 337
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=25.97 E-value=31 Score=29.50 Aligned_cols=19 Identities=21% Similarity=0.170 Sum_probs=12.8
Q ss_pred CeeEEEEEeCC-chHHHHHH
Q 024345 128 KYKVAVLASKQ-EHCLVDFL 146 (269)
Q Consensus 128 ~~riav~~Sg~-g~~l~~ll 146 (269)
+|||+|+|.|. |+.+-..+
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l 22 (316)
T 2ew2_A 3 AMKIAIAGAGAMGSRLGIML 22 (316)
T ss_dssp -CEEEEECCSHHHHHHHHHH
T ss_pred CCeEEEECcCHHHHHHHHHH
Confidence 57999999987 55554333
No 338
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=25.87 E-value=2.1e+02 Score=23.80 Aligned_cols=71 Identities=11% Similarity=0.063 Sum_probs=39.4
Q ss_pred HHHHHHHHHhhhhhhccceeeeeecCCCCCeeEEEEEeC---CchHHHHHHHhhhcCCCCceEEEEeeCCCCCCC--hhH
Q 024345 99 REQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASK---QEHCLVDFLYGWQEGKLPVEITCVISNHDRGPN--SHV 173 (269)
Q Consensus 99 ~~~L~e~L~~la~el~l~~~~~~~~~~~~~~riav~~Sg---~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~--~~v 173 (269)
...+.+.+++.+++.|. ++.++.+. +.......++.+.... +-++|..+.. .+ .+.
T Consensus 18 ~~~~~~gi~~~a~~~g~--------------~~~~~~~~~~~~~~~~~~~i~~l~~~~----vdgiii~~~~-~~~~~~~ 78 (297)
T 3rot_A 18 WTSLFQGAKKAAEELKV--------------DLQILAPPGANDVPKQVQFIESALATY----PSGIATTIPS-DTAFSKS 78 (297)
T ss_dssp HHHHHHHHHHHHHHHTC--------------EEEEECCSSSCCHHHHHHHHHHHHHTC----CSEEEECCCC-SSTTHHH
T ss_pred HHHHHHHHHHHHHHhCc--------------EEEEECCCCcCCHHHHHHHHHHHHHcC----CCEEEEeCCC-HHHHHHH
Confidence 46677788888888773 34444443 2222223333322232 2233333221 22 567
Q ss_pred HHHHHhCCCCeEEeC
Q 024345 174 IRFLERHGIPYHYLC 188 (269)
Q Consensus 174 ~~~a~~~gIP~~~~~ 188 (269)
.+.+.+.|||+..++
T Consensus 79 ~~~~~~~giPvV~~~ 93 (297)
T 3rot_A 79 LQRANKLNIPVIAVD 93 (297)
T ss_dssp HHHHHHHTCCEEEES
T ss_pred HHHHHHCCCCEEEEc
Confidence 888999999999987
No 339
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=25.78 E-value=1.1e+02 Score=28.78 Aligned_cols=68 Identities=16% Similarity=0.171 Sum_probs=36.3
Q ss_pred CeeEEEEEeCC-chHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHH-h---CCCCeEEeCCCCCchHHHHHHHh
Q 024345 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLE-R---HGIPYHYLCAKENEREEELLELV 202 (269)
Q Consensus 128 ~~riav~~Sg~-g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~-~---~gIP~~~~~~~~~~~e~~l~~~l 202 (269)
++||+|+|.|. |.++-..+.. .| ++|. +.|+. ...+.++.+ + .|+... . + -+++.+.+
T Consensus 2 ~m~IgvIG~G~mG~~lA~~La~--~G---~~V~--v~dr~---~~~~~~l~~~~~~g~gi~~~--~----~-~~e~v~~l 64 (482)
T 2pgd_A 2 QADIALIGLAVMGQNLILNMND--HG---FVVC--AFNRT---VSKVDDFLANEAKGTKVLGA--H----S-LEEMVSKL 64 (482)
T ss_dssp CBSEEEECCSHHHHHHHHHHHH--TT---CCEE--EECSS---THHHHHHHHTTTTTSSCEEC--S----S-HHHHHHHB
T ss_pred CCeEEEEChHHHHHHHHHHHHH--CC---CeEE--EEeCC---HHHHHHHHhccccCCCeEEe--C----C-HHHHHhhc
Confidence 47899999998 5666444432 35 4543 45552 344555554 2 343211 1 1 12344444
Q ss_pred ccCCEEEEEe
Q 024345 203 QNTDFLVLAR 212 (269)
Q Consensus 203 ~~~Dlivla~ 212 (269)
+++|+|+++=
T Consensus 65 ~~aDvVilaV 74 (482)
T 2pgd_A 65 KKPRRIILLV 74 (482)
T ss_dssp CSSCEEEECS
T ss_pred cCCCEEEEeC
Confidence 5788888763
No 340
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=25.65 E-value=31 Score=29.02 Aligned_cols=48 Identities=19% Similarity=0.200 Sum_probs=26.7
Q ss_pred eeEEEEEeCC-chHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeE
Q 024345 129 YKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYH 185 (269)
Q Consensus 129 ~riav~~Sg~-g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~ 185 (269)
|||+|+|.|. |..+-..+.. .|. .+| .+.++ ....+.++++++|+.+.
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~--~g~--~~v--~~~~r---~~~~~~~~~~~~g~~~~ 49 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVK--QGG--YRI--YIANR---GAEKRERLEKELGVETS 49 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--HCS--CEE--EEECS---SHHHHHHHHHHTCCEEE
T ss_pred CEEEEECchHHHHHHHHHHHH--CCC--CeE--EEECC---CHHHHHHHHHhcCCEEe
Confidence 5899999987 4444332321 341 344 34555 23445666666787543
No 341
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=25.56 E-value=2e+02 Score=22.21 Aligned_cols=69 Identities=14% Similarity=0.171 Sum_probs=35.9
Q ss_pred eeEEEEEeCCc---hHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhccC
Q 024345 129 YKVAVLASKQE---HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNT 205 (269)
Q Consensus 129 ~riav~~Sg~g---~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~~~ 205 (269)
|||.|.|...+ +..+.|++ +| ++|.++.-+.++.+ . ....++.++..+. ...+++.+.++++
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~---~g---~~V~~~~r~~~~~~-----~-~~~~~~~~~~~D~---~~~~~~~~~~~~~ 68 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQ---AG---YEVTVLVRDSSRLP-----S-EGPRPAHVVVGDV---LQAADVDKTVAGQ 68 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHH---TT---CEEEEEESCGGGSC-----S-SSCCCSEEEESCT---TSHHHHHHHHTTC
T ss_pred CEEEEEcCCcHHHHHHHHHHHH---CC---CeEEEEEeChhhcc-----c-ccCCceEEEEecC---CCHHHHHHHHcCC
Confidence 67877776553 34445544 34 56665544332110 0 0123555555442 1234566777788
Q ss_pred CEEEEEe
Q 024345 206 DFLVLAR 212 (269)
Q Consensus 206 Dlivla~ 212 (269)
|.+|.+.
T Consensus 69 d~vi~~a 75 (206)
T 1hdo_A 69 DAVIVLL 75 (206)
T ss_dssp SEEEECC
T ss_pred CEEEECc
Confidence 9877643
No 342
>3u5e_c L32, RP73, YL38, 60S ribosomal protein L30; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_f 3izs_f 3o58_Z 3o5h_Z 1t0k_B 3u5i_c 4b6a_c 1ck2_A 1cn7_A 1nmu_B* 3jyw_2
Probab=25.55 E-value=26 Score=26.40 Aligned_cols=47 Identities=11% Similarity=0.085 Sum_probs=27.6
Q ss_pred EEeCCchHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEE
Q 024345 134 LASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHY 186 (269)
Q Consensus 134 ~~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~ 186 (269)
+.+|....+.+ ++.|+ +.++.+-.|-+..-..++..+|+.++||++.
T Consensus 23 ~v~G~~~v~ka----i~~gk--aklVilA~D~~~~~~~~i~~~c~~~~ip~~~ 69 (105)
T 3u5e_c 23 YTLGYKSTVKS----LRQGK--SKLIIIAANTPVLRKSELEYYAMLSKTKVYY 69 (105)
T ss_dssp EEESHHHHHHH----HHTTC--CSEEEECTTSCHHHHHHHHHHHHHHTCEEEE
T ss_pred eeECHHHHHHH----HHcCC--ceEEEEeCCCCHHHHHHHHHHHHHcCCCEEE
Confidence 45555455544 34564 5555455444210114578889999999994
No 343
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=25.54 E-value=62 Score=28.10 Aligned_cols=66 Identities=17% Similarity=0.139 Sum_probs=33.9
Q ss_pred CCeeEEEEEeCC-chHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhccC
Q 024345 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNT 205 (269)
Q Consensus 127 ~~~riav~~Sg~-g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~~~ 205 (269)
.++||+|+|.|. |..+-..+.. .| .+| ++.+++ ...+.++ .+.|+.+. . +. .+.++++
T Consensus 29 ~~~~I~iIG~G~mG~~~a~~l~~--~g---~~V--~~~~~~---~~~~~~~-~~~g~~~~--~----~~----~~~~~~~ 87 (316)
T 2uyy_A 29 TDKKIGFLGLGLMGSGIVSNLLK--MG---HTV--TVWNRT---AEKCDLF-IQEGARLG--R----TP----AEVVSTC 87 (316)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHH--TT---CCE--EEECSS---GGGGHHH-HHTTCEEC--S----CH----HHHHHHC
T ss_pred CCCeEEEEcccHHHHHHHHHHHh--CC---CEE--EEEeCC---HHHHHHH-HHcCCEEc--C----CH----HHHHhcC
Confidence 357999999987 4544333322 34 455 344542 2223333 34565321 1 11 1233478
Q ss_pred CEEEEEec
Q 024345 206 DFLVLARY 213 (269)
Q Consensus 206 Dlivla~y 213 (269)
|+|+++--
T Consensus 88 DvVi~av~ 95 (316)
T 2uyy_A 88 DITFACVS 95 (316)
T ss_dssp SEEEECCS
T ss_pred CEEEEeCC
Confidence 88888754
No 344
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=25.53 E-value=2.2e+02 Score=24.72 Aligned_cols=73 Identities=16% Similarity=0.172 Sum_probs=38.8
Q ss_pred CCeeEEEEE-eCC-chHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhc-
Q 024345 127 PKYKVAVLA-SKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ- 203 (269)
Q Consensus 127 ~~~riav~~-Sg~-g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~- 203 (269)
+..+|.|.+ +|. |...-.++.. .| ++|.++..+. .-.+++++.|..... +....+..+++.+...
T Consensus 148 ~g~~vlV~Ga~g~iG~~~~~~a~~--~G---a~Vi~~~~~~------~~~~~~~~~ga~~~~-~~~~~~~~~~~~~~~~~ 215 (334)
T 3qwb_A 148 KGDYVLLFAAAGGVGLILNQLLKM--KG---AHTIAVASTD------EKLKIAKEYGAEYLI-NASKEDILRQVLKFTNG 215 (334)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHH--TT---CEEEEEESSH------HHHHHHHHTTCSEEE-ETTTSCHHHHHHHHTTT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHH--CC---CEEEEEeCCH------HHHHHHHHcCCcEEE-eCCCchHHHHHHHHhCC
Confidence 446787777 333 3444344432 34 5666555443 236788999965443 4222223344545443
Q ss_pred -cCCEEEEE
Q 024345 204 -NTDFLVLA 211 (269)
Q Consensus 204 -~~Dlivla 211 (269)
.+|+++-+
T Consensus 216 ~g~D~vid~ 224 (334)
T 3qwb_A 216 KGVDASFDS 224 (334)
T ss_dssp SCEEEEEEC
T ss_pred CCceEEEEC
Confidence 57887744
No 345
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A*
Probab=25.25 E-value=1.2e+02 Score=23.32 Aligned_cols=43 Identities=7% Similarity=0.224 Sum_probs=27.8
Q ss_pred HHHHHHhCCCCeEEeC-CCCCchHHHHHHHhc--cCCEEEEEecce
Q 024345 173 VIRFLERHGIPYHYLC-AKENEREEELLELVQ--NTDFLVLARYMQ 215 (269)
Q Consensus 173 v~~~a~~~gIP~~~~~-~~~~~~e~~l~~~l~--~~Dlivla~y~~ 215 (269)
+.+.+++.|+++...- .......+++.+..+ ++|+||+...++
T Consensus 83 ~~~~~~~~g~~~~~~~~v~~G~~~~~I~~~a~~~~~DLIV~G~~g~ 128 (155)
T 3dlo_A 83 AVSIIRKEGAEGEEHLLVRGKEPPDDIVDFADEVDAIAIVIGIRKR 128 (155)
T ss_dssp HHHHHHHTTCCEEEEEEESSSCHHHHHHHHHHHTTCSEEEEECCEE
T ss_pred HHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHcCCCEEEECCCCC
Confidence 4566778898876421 111233467777777 899999976654
No 346
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=25.15 E-value=2.8e+02 Score=23.12 Aligned_cols=74 Identities=16% Similarity=0.173 Sum_probs=40.5
Q ss_pred HHHHHHHHHhhhhhhccceeeeeecCCCCCeeEEEEEeCCc-hHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHH
Q 024345 99 REQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQE-HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFL 177 (269)
Q Consensus 99 ~~~L~e~L~~la~el~l~~~~~~~~~~~~~~riav~~Sg~g-~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a 177 (269)
...+.+.+++.+++.|. ++.++.+... ..-...++.+.... .+-..+....+. ...+..+.+
T Consensus 17 ~~~~~~gi~~~a~~~g~--------------~~~~~~~~~~~~~~~~~i~~l~~~~--vdgiIi~~~~~~-~~~~~~~~~ 79 (313)
T 3m9w_A 17 WQKDRDIFVKKAESLGA--------------KVFVQSANGNEETQMSQIENMINRG--VDVLVIIPYNGQ-VLSNVVKEA 79 (313)
T ss_dssp THHHHHHHHHHHHHTSC--------------EEEEEECTTCHHHHHHHHHHHHHTT--CSEEEEECSSTT-SCHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCC--------------EEEEECCCCCHHHHHHHHHHHHHcC--CCEEEEeCCChh-hhHHHHHHH
Confidence 57788888888888763 3444444432 22223333332332 222222222211 124688889
Q ss_pred HhCCCCeEEeCC
Q 024345 178 ERHGIPYHYLCA 189 (269)
Q Consensus 178 ~~~gIP~~~~~~ 189 (269)
.+.|||+..++.
T Consensus 80 ~~~~iPvV~~~~ 91 (313)
T 3m9w_A 80 KQEGIKVLAYDR 91 (313)
T ss_dssp HTTTCEEEEESS
T ss_pred HHCCCeEEEECC
Confidence 999999999873
No 347
>4a17_F RPL7A, 60S ribosomal protein L9; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_F 4a1c_F 4a1e_F
Probab=25.13 E-value=1.3e+02 Score=26.68 Aligned_cols=53 Identities=13% Similarity=0.248 Sum_probs=32.7
Q ss_pred CeeEEEEEeCCchHHHHHHHhhhcCCCCceEEEEeeCCCCCCC---hhHHHHHHhCCCCeEEeC
Q 024345 128 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPN---SHVIRFLERHGIPYHYLC 188 (269)
Q Consensus 128 ~~riav~~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~---~~v~~~a~~~gIP~~~~~ 188 (269)
.+|-.++.+|.-... ..++.|+ +.++.+..|-+ |. ..+-.+|+++||||++++
T Consensus 119 ~k~p~~lk~GvneVt----KaIekgK--AqLVVIA~Dvd--Pielv~~LPaLCee~~VPY~~V~ 174 (255)
T 4a17_F 119 TKKPIVLKYGLNHIT----TLIENKQ--AKLVVIAHDVD--PIELVIFLPQLCRKNDVPFAFVK 174 (255)
T ss_dssp CCCCCCEEECHHHHH----HHHHTSC--CSEEEEESCCS--STHHHHHHHHHHHHTTCCEEEES
T ss_pred CCCCceeecchHHHH----HHHHcCC--ceEEEEeCCCC--hHHHHHHHHHHHHHcCCCEEEEC
Confidence 344445666643333 3333564 66776666553 33 245688999999999987
No 348
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=25.04 E-value=1.6e+02 Score=24.16 Aligned_cols=70 Identities=11% Similarity=0.145 Sum_probs=31.7
Q ss_pred CCeeEEEEEeCCchHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHH-hccC
Q 024345 127 PKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLEL-VQNT 205 (269)
Q Consensus 127 ~~~riav~~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~-l~~~ 205 (269)
.+++|.|+|.|. .-+.+.+...+. .+ + .++. ++ + ...+.+. .|+++...+.. .++.+.+. ++++
T Consensus 8 ~~~~viI~G~G~--~G~~la~~L~~~--g~-v-~vid-~~--~--~~~~~~~-~~~~~i~gd~~---~~~~l~~a~i~~a 72 (234)
T 2aef_A 8 KSRHVVICGWSE--STLECLRELRGS--EV-F-VLAE-DE--N--VRKKVLR-SGANFVHGDPT---RVSDLEKANVRGA 72 (234)
T ss_dssp --CEEEEESCCH--HHHHHHHHSTTS--EE-E-EEES-CG--G--GHHHHHH-TTCEEEESCTT---CHHHHHHTTCTTC
T ss_pred CCCEEEEECCCh--HHHHHHHHHHhC--Ce-E-EEEE-CC--H--HHHHHHh-cCCeEEEcCCC---CHHHHHhcCcchh
Confidence 557899998765 223333332222 23 3 3343 31 1 1233344 78887775532 12222222 2366
Q ss_pred CEEEEE
Q 024345 206 DFLVLA 211 (269)
Q Consensus 206 Dlivla 211 (269)
|.++++
T Consensus 73 d~vi~~ 78 (234)
T 2aef_A 73 RAVIVD 78 (234)
T ss_dssp SEEEEC
T ss_pred cEEEEc
Confidence 766654
No 349
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=24.96 E-value=63 Score=29.71 Aligned_cols=68 Identities=18% Similarity=0.286 Sum_probs=39.2
Q ss_pred CCeeEEEEEeCC-chHHHHHHHhhhcCCCCc-eEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhcc
Q 024345 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPV-EITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQN 204 (269)
Q Consensus 127 ~~~riav~~Sg~-g~~l~~ll~~~~~g~l~~-~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~~ 204 (269)
+.++|+|+|.|. |...-..+.. .| + +| +++|+ ......++|+++|..+ ++. + ++.+.+.+
T Consensus 166 ~g~~VlIiGaG~iG~~~a~~l~~--~G---~~~V--~v~~r---~~~ra~~la~~~g~~~--~~~-----~-~l~~~l~~ 227 (404)
T 1gpj_A 166 HDKTVLVVGAGEMGKTVAKSLVD--RG---VRAV--LVANR---TYERAVELARDLGGEA--VRF-----D-ELVDHLAR 227 (404)
T ss_dssp TTCEEEEESCCHHHHHHHHHHHH--HC---CSEE--EEECS---SHHHHHHHHHHHTCEE--CCG-----G-GHHHHHHT
T ss_pred cCCEEEEEChHHHHHHHHHHHHH--CC---CCEE--EEEeC---CHHHHHHHHHHcCCce--ecH-----H-hHHHHhcC
Confidence 457999999976 3333333332 34 3 44 45665 2334557888888642 221 1 23344568
Q ss_pred CCEEEEEe
Q 024345 205 TDFLVLAR 212 (269)
Q Consensus 205 ~Dlivla~ 212 (269)
+|+|+.+-
T Consensus 228 aDvVi~at 235 (404)
T 1gpj_A 228 SDVVVSAT 235 (404)
T ss_dssp CSEEEECC
T ss_pred CCEEEEcc
Confidence 99999873
No 350
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=24.93 E-value=1.4e+02 Score=26.21 Aligned_cols=70 Identities=13% Similarity=0.081 Sum_probs=39.3
Q ss_pred CCeeEEEEEeCC-c-hHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhcc
Q 024345 127 PKYKVAVLASKQ-E-HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQN 204 (269)
Q Consensus 127 ~~~riav~~Sg~-g-~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~~ 204 (269)
..+||+|+|.|. | ..++.+.+. .|. .+| .+.|+ ......+++++++-.+.... + +.+.+++
T Consensus 134 ~~~~igiIG~G~~g~~~a~~l~~~--~g~--~~V--~v~dr---~~~~~~~l~~~~~~~~~~~~----~----~~e~v~~ 196 (312)
T 2i99_A 134 SSEVLCILGAGVQAYSHYEIFTEQ--FSF--KEV--RIWNR---TKENAEKFADTVQGEVRVCS----S----VQEAVAG 196 (312)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHH--CCC--SEE--EEECS---SHHHHHHHHHHSSSCCEECS----S----HHHHHTT
T ss_pred CCcEEEEECCcHHHHHHHHHHHHh--CCC--cEE--EEEcC---CHHHHHHHHHHhhCCeEEeC----C----HHHHHhc
Confidence 457999999987 3 333444432 131 133 45566 23457778888762222211 1 2244568
Q ss_pred CCEEEEEec
Q 024345 205 TDFLVLARY 213 (269)
Q Consensus 205 ~Dlivla~y 213 (269)
+|+|+++--
T Consensus 197 aDiVi~atp 205 (312)
T 2i99_A 197 ADVIITVTL 205 (312)
T ss_dssp CSEEEECCC
T ss_pred CCEEEEEeC
Confidence 999998754
No 351
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=24.89 E-value=1.7e+02 Score=25.11 Aligned_cols=37 Identities=5% Similarity=0.117 Sum_probs=7.1
Q ss_pred HHHHHHHhhhhhhcccee-eeeecCCCCCeeEEEEEeC
Q 024345 101 QMDEDFFKLSKMFNAMRS-VVRVPDIDPKYKVAVLASK 137 (269)
Q Consensus 101 ~L~e~L~~la~el~l~~~-~~~~~~~~~~~riav~~Sg 137 (269)
+-++...+.++++|-.-. .-+.-...+..+|+++...
T Consensus 33 ~tr~rV~~~a~~lgY~pn~~a~~l~~~~~~~Igvi~~~ 70 (338)
T 3dbi_A 33 ETKDRVFQAVEESGYRPNLLARNLSAKSTQTLGLVVTN 70 (338)
T ss_dssp ---------------------------CCSEEEEEECT
T ss_pred HHHHHHHHHHHHHCCCcCHHHHHhhhCCCCEEEEEecC
Confidence 345555666666663211 0011113345667777665
No 352
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=24.87 E-value=2.2e+02 Score=24.04 Aligned_cols=66 Identities=17% Similarity=0.175 Sum_probs=34.1
Q ss_pred CeeEEEEEeCC--ch-HHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhcc
Q 024345 128 KYKVAVLASKQ--EH-CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQN 204 (269)
Q Consensus 128 ~~riav~~Sg~--g~-~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~~ 204 (269)
++||.|.|... |. ..+.|++ +| .+|.++.-+. .... .+ ++.++..+. . .+.+.+++++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~---~g---~~V~~~~r~~---~~~~-~~-----~~~~~~~Dl---~-~~~~~~~~~~ 62 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKN---DG---NTPIILTRSI---GNKA-IN-----DYEYRVSDY---T-LEDLINQLND 62 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHH---TT---CEEEEEESCC---C-----------CCEEEECCC---C-HHHHHHHTTT
T ss_pred CCEEEEECCCcHHHHHHHHHHHh---CC---CEEEEEeCCC---Cccc-CC-----ceEEEEccc---c-HHHHHHhhcC
Confidence 36777777544 33 3444444 34 5666554432 1111 11 666666542 2 4456666778
Q ss_pred CCEEEEEe
Q 024345 205 TDFLVLAR 212 (269)
Q Consensus 205 ~Dlivla~ 212 (269)
+|.||-..
T Consensus 63 ~d~Vih~a 70 (311)
T 3m2p_A 63 VDAVVHLA 70 (311)
T ss_dssp CSEEEECC
T ss_pred CCEEEEcc
Confidence 88877543
No 353
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=24.76 E-value=1.7e+02 Score=25.47 Aligned_cols=73 Identities=18% Similarity=0.140 Sum_probs=40.7
Q ss_pred CCeeEEEEEeCCc--hHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhc-
Q 024345 127 PKYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ- 203 (269)
Q Consensus 127 ~~~riav~~Sg~g--~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~- 203 (269)
+..+|.|.+.+.+ ...-.++.. .| ++|.++..+.++ .+++++.|..... +....+..+++.+...
T Consensus 144 ~g~~VlV~Ga~g~iG~~~~~~a~~--~G---a~Vi~~~~~~~~------~~~~~~lga~~~~-~~~~~~~~~~~~~~~~~ 211 (340)
T 3gms_A 144 RNDVLLVNACGSAIGHLFAQLSQI--LN---FRLIAVTRNNKH------TEELLRLGAAYVI-DTSTAPLYETVMELTNG 211 (340)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHH--HT---CEEEEEESSSTT------HHHHHHHTCSEEE-ETTTSCHHHHHHHHTTT
T ss_pred CCCEEEEeCCccHHHHHHHHHHHH--cC---CEEEEEeCCHHH------HHHHHhCCCcEEE-eCCcccHHHHHHHHhCC
Confidence 4468888877754 333334432 45 577666555432 5778888876544 3222223344555444
Q ss_pred -cCCEEEEE
Q 024345 204 -NTDFLVLA 211 (269)
Q Consensus 204 -~~Dlivla 211 (269)
++|+++-+
T Consensus 212 ~g~Dvvid~ 220 (340)
T 3gms_A 212 IGADAAIDS 220 (340)
T ss_dssp SCEEEEEES
T ss_pred CCCcEEEEC
Confidence 57887743
No 354
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=24.73 E-value=2.5e+02 Score=23.04 Aligned_cols=13 Identities=8% Similarity=0.105 Sum_probs=7.6
Q ss_pred CCeeEEEEEeCCc
Q 024345 127 PKYKVAVLASKQE 139 (269)
Q Consensus 127 ~~~riav~~Sg~g 139 (269)
+..+|+++.....
T Consensus 4 ~~~~Ig~i~~~~~ 16 (291)
T 3l49_A 4 EGKTIGITAIGTD 16 (291)
T ss_dssp TTCEEEEEESCCS
T ss_pred CCcEEEEEeCCCC
Confidence 4456777766543
No 355
>4a18_G RPL30; ribosome, eukaryotic initiation factor 6, EIF6, transla large ribosomal subunit, rRNA; 3.52A {Tetrahymena thermophila} PDB: 4a19_G 4a1b_G 4a1d_G 4adx_6
Probab=24.72 E-value=27 Score=26.23 Aligned_cols=49 Identities=10% Similarity=0.126 Sum_probs=28.1
Q ss_pred EEeCCchHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEE-eC
Q 024345 134 LASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHY-LC 188 (269)
Q Consensus 134 ~~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~-~~ 188 (269)
+.+|....+.+| +.|+ +.++.+-.|-++.-...+..+|+.++||++. +.
T Consensus 23 lv~G~~~v~kai----~~gk--aklViiA~D~~~~~~~~i~~~c~~~~ip~~~~~~ 72 (104)
T 4a18_G 23 ATLGYKSTIKAI----RNGT--AKLVFISNNCPTVRKSEIEYYASLAQISIHHFVG 72 (104)
T ss_dssp EEESHHHHHHHH----HHTC--CCEEEECTTSCHHHHHHHHHHHHHHTCEEEECSS
T ss_pred EeECHHHHHHHH----HcCC--ceEEEEeCCCCHHHHHHHHHHHHHcCCcEEEecC
Confidence 455554555543 3564 4555444443210014577889999999994 54
No 356
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=24.50 E-value=69 Score=26.05 Aligned_cols=39 Identities=26% Similarity=0.268 Sum_probs=24.8
Q ss_pred HHHHhhhcCCCCceEEEEeeCCC--C-CC---C-hhHHHHHHhCCCCeEE
Q 024345 144 DFLYGWQEGKLPVEITCVISNHD--R-GP---N-SHVIRFLERHGIPYHY 186 (269)
Q Consensus 144 ~ll~~~~~g~l~~~i~~Visn~~--~-~~---~-~~v~~~a~~~gIP~~~ 186 (269)
++.+.+++|+ |.+||-.++ . .+ + ..+++.|..+|||+..
T Consensus 73 ~I~d~I~~ge----IdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T 118 (152)
T 1b93_A 73 QVGALISEGK----IDVLIFFWDPLNAVPHDPDVKALLRLATVWNIPVAT 118 (152)
T ss_dssp HHHHHHHTTC----CCEEEEECCTTSCCTTHHHHHHHHHHHHHTTCCEES
T ss_pred hHHHHHHCCC----ccEEEEcCCcccCCcccccHHHHHHHHHHcCCCEEe
Confidence 4566666785 444554444 1 12 1 2378889999999996
No 357
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=24.39 E-value=2.1e+02 Score=21.53 Aligned_cols=63 Identities=19% Similarity=0.086 Sum_probs=34.3
Q ss_pred CCCeeEEEEEeCCc-hHH--HHHHHhhhcCCCCceEEEE-eeCCCC----------CCC-----hhHHHHHHhCCCCeEE
Q 024345 126 DPKYKVAVLASKQE-HCL--VDFLYGWQEGKLPVEITCV-ISNHDR----------GPN-----SHVIRFLERHGIPYHY 186 (269)
Q Consensus 126 ~~~~riav~~Sg~g-~~l--~~ll~~~~~g~l~~~i~~V-isn~~~----------~~~-----~~v~~~a~~~gIP~~~ 186 (269)
.+++||.++.++.. +.+ ..+-+..++..++.++.++ .+..+. +|- ..+.+.|.++|||+..
T Consensus 4 ~~~mkIlL~C~aGmSTsllv~km~~~a~~~gi~v~i~a~~~~~~~~~~~~~DvvLLgPQV~y~~~~ik~~~~~~~ipV~v 83 (108)
T 3nbm_A 4 SKELKVLVLCAGSGTSAQLANAINEGANLTEVRVIANSGAYGAHYDIMGVYDLIILAPQVRSYYREMKVDAERLGIQIVA 83 (108)
T ss_dssp -CCEEEEEEESSSSHHHHHHHHHHHHHHHHTCSEEEEEEETTSCTTTGGGCSEEEECGGGGGGHHHHHHHHTTTTCEEEE
T ss_pred ccCceEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEEcchHHHHhhccCCCEEEEChHHHHHHHHHHHHhhhcCCcEEE
Confidence 46788887777765 332 1222222233356666553 222111 111 2367778889999999
Q ss_pred eC
Q 024345 187 LC 188 (269)
Q Consensus 187 ~~ 188 (269)
++
T Consensus 84 I~ 85 (108)
T 3nbm_A 84 TR 85 (108)
T ss_dssp CC
T ss_pred eC
Confidence 98
No 358
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=24.31 E-value=66 Score=27.81 Aligned_cols=33 Identities=21% Similarity=0.296 Sum_probs=21.1
Q ss_pred CeeEEEEEeCC-chHHHHHHHhhhcCCCCceEEEEeeCC
Q 024345 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNH 165 (269)
Q Consensus 128 ~~riav~~Sg~-g~~l~~ll~~~~~g~l~~~i~~Visn~ 165 (269)
|+||++.|.|. |..+...+.. .+ . ++++++...
T Consensus 3 MmkI~ViGaGrMG~~i~~~l~~--~~--~-eLva~~d~~ 36 (243)
T 3qy9_A 3 SMKILLIGYGAMNQRVARLAEE--KG--H-EIVGVIENT 36 (243)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TT--C-EEEEEECSS
T ss_pred ceEEEEECcCHHHHHHHHHHHh--CC--C-EEEEEEecC
Confidence 58999999965 4555444432 23 3 788777644
No 359
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=24.12 E-value=37 Score=29.98 Aligned_cols=34 Identities=12% Similarity=0.239 Sum_probs=22.3
Q ss_pred CeeEEEEE-eCC-chHHHHHHHhhhcCCCCceEEEEeeCC
Q 024345 128 KYKVAVLA-SKQ-EHCLVDFLYGWQEGKLPVEITCVISNH 165 (269)
Q Consensus 128 ~~riav~~-Sg~-g~~l~~ll~~~~~g~l~~~i~~Visn~ 165 (269)
++||++.| +|. |..+...+.. .+ ..++++++..+
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~--~~--~~eLv~~~d~~ 42 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLA--AP--DATLVGALDRT 42 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHH--CT--TEEEEEEBCCT
T ss_pred ccEEEEECCCCHHHHHHHHHHHh--CC--CCEEEEEEEec
Confidence 58999999 676 5555444432 23 37888887754
No 360
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=24.00 E-value=1.6e+02 Score=25.51 Aligned_cols=74 Identities=11% Similarity=0.180 Sum_probs=38.0
Q ss_pred eeEEEEEeCC-chHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCC-----CCC-chHHHHHHH
Q 024345 129 YKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCA-----KEN-EREEELLEL 201 (269)
Q Consensus 129 ~riav~~Sg~-g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~-----~~~-~~e~~l~~~ 201 (269)
+||+|+|.|. |+-+-..|.. .| .+|.++ .++ + .+..++.|+-+..... ... ..+. +.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~--~g---~~V~~~--~r~---~---~~~i~~~g~~~~~~~g~~~~~~~~~~~~~---~~ 66 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQR--SG---EDVHFL--LRR---D---YEAIAGNGLKVFSINGDFTLPHVKGYRAP---EE 66 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHH--TS---CCEEEE--CST---T---HHHHHHTCEEEEETTCCEEESCCCEESCH---HH
T ss_pred CEEEEECcCHHHHHHHHHHHH--CC---CeEEEE--EcC---c---HHHHHhCCCEEEcCCCeEEEeeceeecCH---HH
Confidence 7999999999 4555444432 45 455533 331 1 2556677875543110 000 0011 12
Q ss_pred hccCCEEEEEecceeee
Q 024345 202 VQNTDFLVLARYMQVNR 218 (269)
Q Consensus 202 l~~~Dlivla~y~~il~ 218 (269)
++.+|+|+++-=.+-+.
T Consensus 67 ~~~~D~vilavk~~~~~ 83 (312)
T 3hn2_A 67 IGPMDLVLVGLKTFANS 83 (312)
T ss_dssp HCCCSEEEECCCGGGGG
T ss_pred cCCCCEEEEecCCCCcH
Confidence 34789999885444443
No 361
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=23.90 E-value=2.4e+02 Score=23.99 Aligned_cols=73 Identities=5% Similarity=-0.027 Sum_probs=39.7
Q ss_pred HHHHHHHHHhhhhhhccceeeeeecCCCCCeeEEEEEeCCc-hHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHH
Q 024345 99 REQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQE-HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFL 177 (269)
Q Consensus 99 ~~~L~e~L~~la~el~l~~~~~~~~~~~~~~riav~~Sg~g-~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a 177 (269)
..++.+.+++.+++.|. ++.++.+... ..-..+++.+.... +-++|..+.......+.+++
T Consensus 78 ~~~~~~gi~~~a~~~g~--------------~~~~~~~~~~~~~~~~~~~~l~~~~----vdgiIi~~~~~~~~~~~~~~ 139 (338)
T 3dbi_A 78 FSELLFHAARMAEEKGR--------------QLLLADGKHSAEEERQAIQYLLDLR----CDAIMIYPRFLSVDEIDDII 139 (338)
T ss_dssp HHHHHHHHHHHHHHTTC--------------EEEEEECTTSHHHHHHHHHHHHHTT----CSEEEECCSSSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCC--------------EEEEEeCCCChHHHHHHHHHHHhCC----CCEEEEeCCCCChHHHHHHH
Confidence 46677777777777763 4444444433 22222333333332 22333332211234577889
Q ss_pred HhCCCCeEEeCC
Q 024345 178 ERHGIPYHYLCA 189 (269)
Q Consensus 178 ~~~gIP~~~~~~ 189 (269)
++.|||+..++.
T Consensus 140 ~~~~iPvV~~~~ 151 (338)
T 3dbi_A 140 DAHSQPIMVLNR 151 (338)
T ss_dssp HHCSSCEEEESS
T ss_pred HcCCCCEEEEcC
Confidence 999999998873
No 362
>2j0w_A Lysine-sensitive aspartokinase 3; feedback inhibition, allosteric regulation, ACT domain, transferase, amino acid biosynthesis; HET: ADP; 2.5A {Escherichia coli} SCOP: c.73.1.3 d.58.18.10 d.58.18.10 PDB: 2j0x_A*
Probab=23.52 E-value=28 Score=33.05 Aligned_cols=83 Identities=12% Similarity=0.006 Sum_probs=0.0
Q ss_pred EEEEEEcC---CCcChHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHhhhhhhc-ccee
Q 024345 43 GIHVFHCP---DEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFN-AMRS 118 (269)
Q Consensus 43 ~iItV~G~---DrpGIVa~VS~~La~~giNI~dl~~~~~~~~g~F~m~~~v~~p~~~~~~~~L~e~L~~la~el~-l~~~ 118 (269)
..|++.|. +.+|+.++|-+.|+++|+|+.-+.+.-. .+.+.++..+...+...+.++++..+++ ....
T Consensus 309 ~~i~i~~~~m~~~~g~~~~if~~l~~~~i~vd~i~ss~~--------sis~~v~~~~~~~~~~~~~~~~~~~el~~~~~v 380 (449)
T 2j0w_A 309 TLLTLHSLNMLHSRGFLAEVFGILARHNISVDLITTSEV--------SVALTLDTTGSTSTGDTLLTQSLLMELSALCRV 380 (449)
T ss_dssp EEEEECCCSCSCHHHHHHHHTTTTTTTTCCCSEEEEETT--------EEEEEECCCCCSSTTCCSSCHHHHHHHHHHSCE
T ss_pred EEEEEEecCCCCccCHHHHHHHHHHHcCCCEEEEEeCCC--------eEEEEEeccccchhhHHHHHHHHHHHhccCCeE
Q ss_pred eeeecCCCCCeeEEEEEeC
Q 024345 119 VVRVPDIDPKYKVAVLASK 137 (269)
Q Consensus 119 ~~~~~~~~~~~riav~~Sg 137 (269)
.+.. ..-+|++.|.|
T Consensus 381 ~~~~----~~a~vsvVG~g 395 (449)
T 2j0w_A 381 EVEE----GLALVALIGND 395 (449)
T ss_dssp EEEE----EEEEEEEEESS
T ss_pred EEeC----CeEEEEEECCC
No 363
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=23.38 E-value=2.6e+02 Score=24.40 Aligned_cols=75 Identities=12% Similarity=0.135 Sum_probs=39.9
Q ss_pred CCCeeEEEEEeCC-chHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCC-CchHHHHHHHhc
Q 024345 126 DPKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKE-NEREEELLELVQ 203 (269)
Q Consensus 126 ~~~~riav~~Sg~-g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~-~~~e~~l~~~l~ 203 (269)
.+..+|.|.+.|. |...-.+++. .| ++|.++-.+. .-.+++++.|..... +... .+..+++.+...
T Consensus 167 ~~g~~VlV~GaG~vG~~a~qla~~--~G---a~Vi~~~~~~------~~~~~~~~lGa~~~~-~~~~~~~~~~~i~~~~~ 234 (352)
T 1e3j_A 167 QLGTTVLVIGAGPIGLVSVLAAKA--YG---AFVVCTARSP------RRLEVAKNCGADVTL-VVDPAKEEESSIIERIR 234 (352)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHH--TT---CEEEEEESCH------HHHHHHHHTTCSEEE-ECCTTTSCHHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHH--cC---CEEEEEcCCH------HHHHHHHHhCCCEEE-cCcccccHHHHHHHHhc
Confidence 3456899988643 3444444442 34 5654333332 246788899987443 4221 122334544442
Q ss_pred -----cCCEEEEEe
Q 024345 204 -----NTDFLVLAR 212 (269)
Q Consensus 204 -----~~Dlivla~ 212 (269)
.+|+++-+.
T Consensus 235 ~~~g~g~D~vid~~ 248 (352)
T 1e3j_A 235 SAIGDLPNVTIDCS 248 (352)
T ss_dssp HHSSSCCSEEEECS
T ss_pred cccCCCCCEEEECC
Confidence 588887654
No 364
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=23.32 E-value=67 Score=28.42 Aligned_cols=74 Identities=20% Similarity=0.121 Sum_probs=39.0
Q ss_pred CCCeeEEEEEeCC-chHHHHHHHhhhcCCCCc-eEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhc
Q 024345 126 DPKYKVAVLASKQ-EHCLVDFLYGWQEGKLPV-EITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 203 (269)
Q Consensus 126 ~~~~riav~~Sg~-g~~l~~ll~~~~~g~l~~-~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~ 203 (269)
.+..+|+|.+.|. |...-.+.+. .| + +|.++-++. .-.++|+++|.... ++.+..+..+++.+...
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~--~G---a~~Vi~~~~~~------~~~~~~~~lGa~~v-i~~~~~~~~~~v~~~t~ 232 (352)
T 3fpc_A 165 KLGDTVCVIGIGPVGLMSVAGANH--LG---AGRIFAVGSRK------HCCDIALEYGATDI-INYKNGDIVEQILKATD 232 (352)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHT--TT---CSSEEEECCCH------HHHHHHHHHTCCEE-ECGGGSCHHHHHHHHTT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHH--cC---CcEEEEECCCH------HHHHHHHHhCCceE-EcCCCcCHHHHHHHHcC
Confidence 3556899998654 3444444442 34 4 565443322 24688899997644 34222223344444443
Q ss_pred --cCCEEEEE
Q 024345 204 --NTDFLVLA 211 (269)
Q Consensus 204 --~~Dlivla 211 (269)
++|+++-+
T Consensus 233 g~g~D~v~d~ 242 (352)
T 3fpc_A 233 GKGVDKVVIA 242 (352)
T ss_dssp TCCEEEEEEC
T ss_pred CCCCCEEEEC
Confidence 47776643
No 365
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=23.25 E-value=2.2e+02 Score=24.59 Aligned_cols=73 Identities=11% Similarity=0.061 Sum_probs=39.4
Q ss_pred CCeeEEEEE-eCC-chHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhc-
Q 024345 127 PKYKVAVLA-SKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ- 203 (269)
Q Consensus 127 ~~~riav~~-Sg~-g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~- 203 (269)
+..+|.|.+ +|. |...-.++.. .| ++|.++..+. .-.+++++.|..... +....+..+++.+...
T Consensus 140 ~g~~VlV~Ga~g~iG~~~~~~a~~--~G---a~Vi~~~~~~------~~~~~~~~~Ga~~~~-~~~~~~~~~~~~~~~~~ 207 (325)
T 3jyn_A 140 PGEIILFHAAAGGVGSLACQWAKA--LG---AKLIGTVSSP------EKAAHAKALGAWETI-DYSHEDVAKRVLELTDG 207 (325)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHH--HT---CEEEEEESSH------HHHHHHHHHTCSEEE-ETTTSCHHHHHHHHTTT
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHH--CC---CEEEEEeCCH------HHHHHHHHcCCCEEE-eCCCccHHHHHHHHhCC
Confidence 446787777 333 3444444443 45 5666555443 236788888865443 4222233345555544
Q ss_pred -cCCEEEEE
Q 024345 204 -NTDFLVLA 211 (269)
Q Consensus 204 -~~Dlivla 211 (269)
.+|+++-+
T Consensus 208 ~g~Dvvid~ 216 (325)
T 3jyn_A 208 KKCPVVYDG 216 (325)
T ss_dssp CCEEEEEES
T ss_pred CCceEEEEC
Confidence 58887754
No 366
>3ff1_A Glucose-6-phosphate isomerase; alpha beta, rossmann fold, gluconeogenesis, glycolysis, structural genomics; HET: G6Q; 1.65A {Staphylococcus aureus subsp} SCOP: c.80.1.2 PDB: 3ifs_A*
Probab=23.03 E-value=54 Score=31.28 Aligned_cols=74 Identities=12% Similarity=-0.008 Sum_probs=47.6
Q ss_pred CCCHHHHHHHHHhhhhhhccceeeeeecCCCCCeeEEEEEeCCchHHHHHHHh------hh-c-CC--CCceEEEEeeCC
Q 024345 96 KWPREQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYG------WQ-E-GK--LPVEITCVISNH 165 (269)
Q Consensus 96 ~~~~~~L~e~L~~la~el~l~~~~~~~~~~~~~~riav~~Sg~g~~l~~ll~~------~~-~-g~--l~~~i~~Visn~ 165 (269)
++|.+.+.+.|+.+ + ++.-+.+.+|++|++.+.+... +. . |. ....+++ +|++
T Consensus 117 nvDp~~i~~~l~~l----~------------~~~Tl~iViSKSgtT~ET~~n~~~~r~~l~~~~g~~~~~~h~va-vT~~ 179 (446)
T 3ff1_A 117 HLSSTYTKELVDYL----A------------DKDFSVNVISKSGTTTEPAVAFRLFKQLVEERYGKEEAQKRIFA-TTDK 179 (446)
T ss_dssp SCCHHHHHHHHHHG----G------------GCCEEEEEECSSSCCHHHHHHHHHHHHHHHHHHCHHHHHHHEEE-EECS
T ss_pred CCCHHHHHHHHHhc----C------------ccceEEEEEcCCCCCHHHHHHHHHHHHHHHHhcCcccccceEEE-EeCC
Confidence 67888888877654 2 2235678899999655444321 11 1 31 1124665 4877
Q ss_pred CCCCChhHHHHHHhCCCCeEEeCC
Q 024345 166 DRGPNSHVIRFLERHGIPYHYLCA 189 (269)
Q Consensus 166 ~~~~~~~v~~~a~~~gIP~~~~~~ 189 (269)
.++++.++|+++||+++.++.
T Consensus 180 ---~~g~L~~~a~~~G~~~F~~~d 200 (446)
T 3ff1_A 180 ---EKGALKQLATNEGYETFIVPD 200 (446)
T ss_dssp ---SCSHHHHHHHHHTCEEEECCT
T ss_pred ---CcchhhhHHHHcCCeEEEecc
Confidence 347899999999999888763
No 367
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=22.97 E-value=65 Score=30.56 Aligned_cols=70 Identities=13% Similarity=0.145 Sum_probs=37.2
Q ss_pred CCCeeEEEEEeCC-chHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhC---CCCeEEeCCCCCchHHHHHHH
Q 024345 126 DPKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERH---GIPYHYLCAKENEREEELLEL 201 (269)
Q Consensus 126 ~~~~riav~~Sg~-g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~---gIP~~~~~~~~~~~e~~l~~~ 201 (269)
-.|+||+|+|.|. |.+|-..+.. .| ++| ++.|+ ....+.++.+++ |+- ... + -+++.+.
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~--~G---~~V--~v~~r---~~~~~~~l~~~~~~~gi~--~~~----s-~~e~v~~ 75 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIES--RG---YTV--SIFNR---SREKTEEVIAENPGKKLV--PYY----T-VKEFVES 75 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHT--TT---CCE--EEECS---SHHHHHHHHHHSTTSCEE--ECS----S-HHHHHHT
T ss_pred cCCCeEEEEccHHHHHHHHHHHHh--CC---CeE--EEEeC---CHHHHHHHHhhCCCCCeE--EeC----C-HHHHHhC
Confidence 3568999999998 6666444432 35 455 35566 234455666654 432 111 1 1233332
Q ss_pred hccCCEEEEEe
Q 024345 202 VQNTDFLVLAR 212 (269)
Q Consensus 202 l~~~Dlivla~ 212 (269)
++++|+|+++=
T Consensus 76 l~~aDvVil~V 86 (480)
T 2zyd_A 76 LETPRRILLMV 86 (480)
T ss_dssp BCSSCEEEECS
T ss_pred CCCCCEEEEEC
Confidence 33488888864
No 368
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=22.96 E-value=1.7e+02 Score=25.55 Aligned_cols=13 Identities=15% Similarity=0.138 Sum_probs=8.3
Q ss_pred CCCeeEEEEEeCC
Q 024345 126 DPKYKVAVLASKQ 138 (269)
Q Consensus 126 ~~~~riav~~Sg~ 138 (269)
.+++|+.|+.-..
T Consensus 6 ~~m~~~~vi~Np~ 18 (304)
T 3s40_A 6 TKFEKVLLIVNPK 18 (304)
T ss_dssp CSCSSEEEEECTT
T ss_pred CCCCEEEEEECcc
Confidence 3467788776543
No 369
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=22.81 E-value=50 Score=24.14 Aligned_cols=15 Identities=27% Similarity=0.372 Sum_probs=13.7
Q ss_pred hHHHHHHhCCCCeEE
Q 024345 172 HVIRFLERHGIPYHY 186 (269)
Q Consensus 172 ~v~~~a~~~gIP~~~ 186 (269)
.+++.|+++|||++.
T Consensus 31 ~I~~~A~e~~VPi~e 45 (83)
T 3bzy_B 31 QIIKLAELYDIPVIE 45 (83)
T ss_dssp HHHHHHHHTTCCEEE
T ss_pred HHHHHHHHcCCCEEe
Confidence 588999999999997
No 370
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=22.80 E-value=1.9e+02 Score=23.94 Aligned_cols=72 Identities=7% Similarity=-0.008 Sum_probs=40.2
Q ss_pred HHHHHHHHHhhhhhhccceeeeeecCCCCCeeEEEEEeCCc-hHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHH
Q 024345 99 REQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQE-HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFL 177 (269)
Q Consensus 99 ~~~L~e~L~~la~el~l~~~~~~~~~~~~~~riav~~Sg~g-~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a 177 (269)
...+.+.+++.+++.|. ++.++.+... .....+++.+.... +-++|..... ......+.+
T Consensus 23 ~~~~~~gi~~~a~~~g~--------------~~~~~~~~~~~~~~~~~~~~l~~~~----vdgiIi~~~~-~~~~~~~~~ 83 (291)
T 3egc_A 23 FAEVASGVESEARHKGY--------------SVLLANTAEDIVREREAVGQFFERR----VDGLILAPSE-GEHDYLRTE 83 (291)
T ss_dssp HHHHHHHHHHHHHHTTC--------------EEEEEECTTCHHHHHHHHHHHHHTT----CSEEEECCCS-SCCHHHHHS
T ss_pred HHHHHHHHHHHHHHCCC--------------EEEEEeCCCCHHHHHHHHHHHHHCC----CCEEEEeCCC-CChHHHHHh
Confidence 35666777777777663 4444555442 22333444433332 2233333322 245677888
Q ss_pred HhCCCCeEEeCC
Q 024345 178 ERHGIPYHYLCA 189 (269)
Q Consensus 178 ~~~gIP~~~~~~ 189 (269)
.+.|||+..++.
T Consensus 84 ~~~~iPvV~~~~ 95 (291)
T 3egc_A 84 LPKTFPIVAVNR 95 (291)
T ss_dssp SCTTSCEEEESS
T ss_pred hccCCCEEEEec
Confidence 889999999883
No 371
>2zkr_f 60S ribosomal protein L7A; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=22.76 E-value=1.3e+02 Score=26.79 Aligned_cols=53 Identities=13% Similarity=0.181 Sum_probs=32.8
Q ss_pred eEEEEEeCCchHHHHHHHhhhcCCCCceEEEEeeCCCCC-CChhHHHHHHhCCCCeEEeC
Q 024345 130 KVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRG-PNSHVIRFLERHGIPYHYLC 188 (269)
Q Consensus 130 riav~~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~-~~~~v~~~a~~~gIP~~~~~ 188 (269)
|-..+.+|.-..+.+ ++.|. +.++.+-.|-+.. -...+..+|+++||||++++
T Consensus 132 ~~~~L~~G~keV~Ka----Iekgk--AkLVIIA~DasP~ei~~~Lp~LC~~~~VPyi~v~ 185 (266)
T 2zkr_f 132 RPPVLRAGVNTVTTL----VENKK--AQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIK 185 (266)
T ss_dssp SCCCCCBSHHHHHHH----HHTTC--CSEEEEESCCSSSTTTTHHHHHHHHHTCCEEEES
T ss_pred CCCeeeeChHHHHHH----HHhCC--ceEEEEecCCCHHHHHHHHHHHHHhcCCCEEEEC
Confidence 434455665455443 34564 6677666665321 12457799999999999875
No 372
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=22.68 E-value=1.3e+02 Score=25.70 Aligned_cols=68 Identities=22% Similarity=0.240 Sum_probs=39.8
Q ss_pred CCeeEEEEEeCCc--hHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhcc
Q 024345 127 PKYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQN 204 (269)
Q Consensus 127 ~~~riav~~Sg~g--~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~~ 204 (269)
..+||.|+|.|.- ...+.|++ .| ++|. ||+.. ....+.+++++.+|.+..-+ .. + +-+.+
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~---~G---A~Vt-Vvap~---~~~~l~~l~~~~~i~~i~~~--~~--~----~dL~~ 91 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQ---EG---AAIT-VVAPT---VSAEINEWEAKGQLRVKRKK--VG--E----EDLLN 91 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGG---GC---CCEE-EECSS---CCHHHHHHHHTTSCEEECSC--CC--G----GGSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHH---CC---CEEE-EECCC---CCHHHHHHHHcCCcEEEECC--CC--H----hHhCC
Confidence 4478999988873 44444544 45 5555 44433 34557788888777655322 11 1 12347
Q ss_pred CCEEEEEe
Q 024345 205 TDFLVLAR 212 (269)
Q Consensus 205 ~Dlivla~ 212 (269)
+|++|.|-
T Consensus 92 adLVIaAT 99 (223)
T 3dfz_A 92 VFFIVVAT 99 (223)
T ss_dssp CSEEEECC
T ss_pred CCEEEECC
Confidence 88888764
No 373
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=22.66 E-value=3.6e+02 Score=23.84 Aligned_cols=73 Identities=8% Similarity=0.058 Sum_probs=40.5
Q ss_pred CCCeeEEEEEeCCc--hHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhc
Q 024345 126 DPKYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 203 (269)
Q Consensus 126 ~~~~riav~~Sg~g--~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~ 203 (269)
.+..+|+|.+.+.+ ...-.+.+. .| +++.+++ +.. =.++|+++|..... +.+..+..+++.++..
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~--~G---a~Vi~~~-~~~------~~~~~~~lGa~~vi-~~~~~~~~~~v~~~t~ 229 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRL--SG---YIPIATC-SPH------NFDLAKSRGAEEVF-DYRAPNLAQTIRTYTK 229 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHH--TT---CEEEEEE-CGG------GHHHHHHTTCSEEE-ETTSTTHHHHHHHHTT
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHH--CC---CEEEEEe-CHH------HHHHHHHcCCcEEE-ECCCchHHHHHHHHcc
Confidence 34467888877443 444444443 45 5676664 332 26799999975443 4322223344444444
Q ss_pred -cCCEEEEE
Q 024345 204 -NTDFLVLA 211 (269)
Q Consensus 204 -~~Dlivla 211 (269)
++|+++=+
T Consensus 230 g~~d~v~d~ 238 (371)
T 3gqv_A 230 NNLRYALDC 238 (371)
T ss_dssp TCCCEEEES
T ss_pred CCccEEEEC
Confidence 68887744
No 374
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=22.60 E-value=94 Score=25.54 Aligned_cols=50 Identities=10% Similarity=0.125 Sum_probs=29.5
Q ss_pred CCCCCeeEEEEEeCCc-hHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEE
Q 024345 124 DIDPKYKVAVLASKQE-HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHY 186 (269)
Q Consensus 124 ~~~~~~riav~~Sg~g-~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~ 186 (269)
....++|+++++.|.. ..+.+.++ +. ..++++.+-+.+. . . .-+|+|++-
T Consensus 8 ~~~~~k~v~IiGAGg~g~~v~~~l~---~~--~~~~vgfiDd~~~---~---~--~~~g~~Vlg 58 (220)
T 4ea9_A 8 ASLAIGGVVIIGGGGHAKVVIESLR---AC--GETVAAIVDADPT---R---R--AVLGVPVVG 58 (220)
T ss_dssp CCCCSSCEEEECCSHHHHHHHHHHH---HT--TCCEEEEECSCC-----------CBTTBCEEE
T ss_pred cccCCCCEEEEcCCHHHHHHHHHHH---hC--CCEEEEEEeCCcc---c---C--cCCCeeEEC
Confidence 3456678999998863 34444443 32 3788888876532 1 1 246777764
No 375
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=22.51 E-value=74 Score=26.67 Aligned_cols=39 Identities=26% Similarity=0.220 Sum_probs=24.6
Q ss_pred HHHHhhhcCCCCceEEEEeeCCC--C-C---CC-hhHHHHHHhCCCCeEE
Q 024345 144 DFLYGWQEGKLPVEITCVISNHD--R-G---PN-SHVIRFLERHGIPYHY 186 (269)
Q Consensus 144 ~ll~~~~~g~l~~~i~~Visn~~--~-~---~~-~~v~~~a~~~gIP~~~ 186 (269)
++.+.+++|+ |.+||-.++ . . ++ ..+++.|..+||||..
T Consensus 89 qI~d~I~~ge----IdlVInt~dPl~~~~h~~D~~~IRR~A~~~~IP~~T 134 (178)
T 1vmd_A 89 QIGAMIAEGK----IDVLIFFWDPLEPQAHDVDVKALIRIATVYNIPVAI 134 (178)
T ss_dssp HHHHHHHTTS----CCEEEEECCSSSCCTTSCCHHHHHHHHHHTTCCEES
T ss_pred hHHHHHHCCC----ccEEEEccCccCCCcccccHHHHHHHHHHcCCCEEe
Confidence 4566666785 334444333 1 1 23 2478889999999996
No 376
>3sm9_A Mglur3, metabotropic glutamate receptor 3; structural genomics, structural genomics consortium, SGC, CE membrane, G-protein coupled receptor; HET: Z99; 2.26A {Homo sapiens}
Probab=22.48 E-value=4.5e+02 Score=24.09 Aligned_cols=97 Identities=11% Similarity=0.083 Sum_probs=59.6
Q ss_pred EEEEEEcCCCcChHHHHHHHHHhCCCeEeEeeeecc--CCCCe--EEEEEEEEeCCCCCCHHHHHHHHHhhhhhhcccee
Q 024345 43 GIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVP--EKKNV--FYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMRS 118 (269)
Q Consensus 43 ~iItV~G~DrpGIVa~VS~~La~~giNI~dl~~~~~--~~~g~--F~m~~~v~~p~~~~~~~~L~e~L~~la~el~l~~~ 118 (269)
-+.-|+|+-..+.-..++.++...++=...-..+.. ...+. ++.|+ .| +-...-.++-++...++
T Consensus 116 ~v~aviG~~~S~~s~ava~i~~~~~iP~Is~~a~~~~lsd~~~~p~~fr~---~p----sd~~~~~a~~~ll~~fg---- 184 (479)
T 3sm9_A 116 LIAGVIGGSYSSVSIQVANLLRLFQIPQISYASTSAKLSDKSRYDYFART---VP----PDFYQAKAMAEILRFFN---- 184 (479)
T ss_dssp CEEEEECCSSHHHHHHHHHHHGGGTCCEEESSCCCGGGGCTTTTTTEEES---SC----CTHHHHHHHHHHHHHTT----
T ss_pred ceEEEECCCCcHHHHHHHHHHhcCCccEECCCcCCccccCcccCCCeEEe---CC----cHHHHHHHHHHHHHHCC----
Confidence 477899999999999999999999877665433311 11221 12233 22 23455667777777765
Q ss_pred eeeecCCCCCeeEEEEEeCCc---hHHHHHHHhhhcCCCCceEEEE
Q 024345 119 VVRVPDIDPKYKVAVLASKQE---HCLVDFLYGWQEGKLPVEITCV 161 (269)
Q Consensus 119 ~~~~~~~~~~~riav~~Sg~g---~~l~~ll~~~~~g~l~~~i~~V 161 (269)
| .+|+++.+... ..++.+-+..++. ...|+.+
T Consensus 185 -w--------~~V~ii~~dd~~G~~~~~~~~~~~~~~--Gi~v~~~ 219 (479)
T 3sm9_A 185 -W--------TYVSTVASEGDYGETGIEAFEQEARLR--NISIATA 219 (479)
T ss_dssp -C--------CEEEEEEESSHHHHHHHHHHHHHHHTT--TCEEEEE
T ss_pred -C--------eEEEEEEecchhhHHHHHHHHHHHHHC--CceEEEE
Confidence 3 58999999873 3344544444433 2455543
No 377
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=22.47 E-value=1.7e+02 Score=27.43 Aligned_cols=136 Identities=10% Similarity=0.119 Sum_probs=72.7
Q ss_pred HHHHHHHHhCCCeEeEeeeeccCC-CCeE---EEEEEEEeCCCCCCHHHHHHHHHhhhhhhccceeeeeecCCCCCeeEE
Q 024345 57 AKLSECIASRGGNILAADVFVPEK-KNVF---YSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVA 132 (269)
Q Consensus 57 a~VS~~La~~giNI~dl~~~~~~~-~g~F---~m~~~v~~p~~~~~~~~L~e~L~~la~el~l~~~~~~~~~~~~~~ria 132 (269)
.+.++.|.+.|+....+++-.+.. .+.+ .-+.++. .-.....+...+.+-++.+... -..-++.||+
T Consensus 124 ~~l~~~l~~~~it~ia~E~i~r~~ra~~l~~ls~~s~iA------Gy~Av~~aa~~l~~~~~~l~t~---~g~v~~~kV~ 194 (405)
T 4dio_A 124 EEAISAMAGAGLTTFAMELMPRITRAQSMDVLSSQANLA------GYQAVIDAAYEYDRALPMMMTA---AGTVPAAKIF 194 (405)
T ss_dssp HHHHHHHHHTTCEEEEGGGSCCSGGGGGGCHHHHHHHHH------HHHHHHHHHHHCSSCSSCEEET---TEEECCCEEE
T ss_pred HHHHHHHHHCCCeEEEeeccccccccCccceecchhHHH------HHHHHHHHHHHhHhhhchhhcc---CCCcCCCEEE
Confidence 578999999999998887742211 1111 1000000 1123444555555555533211 1122568999
Q ss_pred EEEeCC-chHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCC----------C-----Cc---
Q 024345 133 VLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAK----------E-----NE--- 193 (269)
Q Consensus 133 v~~Sg~-g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~----------~-----~~--- 193 (269)
|+|.|. |...-.++.. .| ++| ++.++. ....+.+++.|.++..++.. . ++
T Consensus 195 ViG~G~iG~~aa~~a~~--lG---a~V--~v~D~~----~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~ 263 (405)
T 4dio_A 195 VMGAGVAGLQAIATARR--LG---AVV--SATDVR----PAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQV 263 (405)
T ss_dssp EECCSHHHHHHHHHHHH--TT---CEE--EEECSS----TTHHHHHHHTTCEECCCCC-----------------CHHHH
T ss_pred EECCcHHHHHHHHHHHH--CC---CEE--EEEcCC----HHHHHHHHHcCCceeecccccccccccccchhhhcchhhhh
Confidence 999987 5555555553 34 554 355542 12467777888765443210 0 00
Q ss_pred -hHHHHHHHhccCCEEEEEe
Q 024345 194 -REEELLELVQNTDFLVLAR 212 (269)
Q Consensus 194 -~e~~l~~~l~~~Dlivla~ 212 (269)
..+.+.+.++++|+++.+-
T Consensus 264 ~~~~~l~e~l~~aDVVI~tv 283 (405)
T 4dio_A 264 KQAALVAEHIAKQDIVITTA 283 (405)
T ss_dssp HHHHHHHHHHHTCSEEEECC
T ss_pred hhHhHHHHHhcCCCEEEECC
Confidence 0234566677999999763
No 378
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa}
Probab=22.47 E-value=2.3e+02 Score=23.77 Aligned_cols=41 Identities=10% Similarity=0.091 Sum_probs=26.4
Q ss_pred HHHHHHhCCCC-eE-EeCCCCCchHHHHHHHhc--cCCEEEEEecce
Q 024345 173 VIRFLERHGIP-YH-YLCAKENEREEELLELVQ--NTDFLVLARYMQ 215 (269)
Q Consensus 173 v~~~a~~~gIP-~~-~~~~~~~~~e~~l~~~l~--~~Dlivla~y~~ 215 (269)
+.++++++|++ +. .+. . ....+++.+..+ ++|+||+..+++
T Consensus 204 l~~~~~~~g~~~~~~~v~-~-g~~~~~I~~~a~~~~~dLiVmG~~g~ 248 (290)
T 3mt0_A 204 CRTFQAEYGFSDEQLHIE-E-GPADVLIPRTAQKLDAVVTVIGTVAR 248 (290)
T ss_dssp HHHHHHHHTCCTTTEEEE-E-SCHHHHHHHHHHHHTCSEEEEECCSS
T ss_pred HHHHHHHcCCCcceEEEe-c-cCHHHHHHHHHHhcCCCEEEECCCCC
Confidence 44577888985 21 111 1 233567777776 799999988754
No 379
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=22.37 E-value=1.2e+02 Score=26.89 Aligned_cols=73 Identities=14% Similarity=0.087 Sum_probs=41.1
Q ss_pred CCeeEEEEEeCC-chHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhc--
Q 024345 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ-- 203 (269)
Q Consensus 127 ~~~riav~~Sg~-g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~-- 203 (269)
+-.+|+|.++|. |...-.+++. .| ++|.++..+. .-.++|++.|..... +.......+++.+...
T Consensus 189 ~g~~VlV~G~G~vG~~a~qla~~--~G---a~Vi~~~~~~------~~~~~~~~lGa~~vi-~~~~~~~~~~v~~~~~g~ 256 (363)
T 3uog_A 189 AGDRVVVQGTGGVALFGLQIAKA--TG---AEVIVTSSSR------EKLDRAFALGADHGI-NRLEEDWVERVYALTGDR 256 (363)
T ss_dssp TTCEEEEESSBHHHHHHHHHHHH--TT---CEEEEEESCH------HHHHHHHHHTCSEEE-ETTTSCHHHHHHHHHTTC
T ss_pred CCCEEEEECCCHHHHHHHHHHHH--cC---CEEEEEecCc------hhHHHHHHcCCCEEE-cCCcccHHHHHHHHhCCC
Confidence 456899988554 3343344432 34 5766555443 236778999986544 4222233345555544
Q ss_pred cCCEEEEE
Q 024345 204 NTDFLVLA 211 (269)
Q Consensus 204 ~~Dlivla 211 (269)
++|+++-+
T Consensus 257 g~D~vid~ 264 (363)
T 3uog_A 257 GADHILEI 264 (363)
T ss_dssp CEEEEEEE
T ss_pred CceEEEEC
Confidence 68887754
No 380
>4f11_A Gamma-aminobutyric acid type B receptor subunit 2; venus flytrap module, G-protein coupled receptor, signaling; 2.38A {Homo sapiens} PDB: 4f12_A*
Probab=22.30 E-value=3.3e+02 Score=23.98 Aligned_cols=121 Identities=12% Similarity=0.098 Sum_probs=71.5
Q ss_pred EEEEEcCCCcChHHHHHHHHHhCCCeEeEeeeecc--CCCC--eEEEEEEEEeCCCCCCHHHHHHHHHhhhhhhccceee
Q 024345 44 IHVFHCPDEVGIVAKLSECIASRGGNILAADVFVP--EKKN--VFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMRSV 119 (269)
Q Consensus 44 iItV~G~DrpGIVa~VS~~La~~giNI~dl~~~~~--~~~g--~F~m~~~v~~p~~~~~~~~L~e~L~~la~el~l~~~~ 119 (269)
+.-|+|+-..+....++.++...++=......... ...+ -++.++ .| +....-.++.++.+.++
T Consensus 86 v~aviG~~~S~~~~a~~~~~~~~~ip~is~~~~~~~l~~~~~~~~~fr~---~~----~~~~~~~~~~~~~~~~g----- 153 (433)
T 4f11_A 86 HLMVFGGVCPSVTSIIAESLQGWNLVQLSFAATTPVLADKKKYPYFFRT---VP----SDNAVNPAILKLLKHYQ----- 153 (433)
T ss_dssp CSEEEECCSHHHHHHHHHTHHHHTCEEEESSCCCGGGGCTTTCTTEEES---SC----CGGGHHHHHHHHHHHTT-----
T ss_pred eEEEECCCcchHHHHHHHHHHhcCceEEEcccCCccccccccCCceEEe---cC----chHHHHHHHHHHHHHcC-----
Confidence 55688999999999999999999887776443311 1111 222233 12 23445566666666554
Q ss_pred eeecCCCCCeeEEEEEeCCc--h-HHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeC
Q 024345 120 VRVPDIDPKYKVAVLASKQE--H-CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (269)
Q Consensus 120 ~~~~~~~~~~riav~~Sg~g--~-~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~ 188 (269)
| +||+++.+... . .++.+.+..++. ..+|+....-+++ -...+...++.+--+.++.
T Consensus 154 ~--------~~v~ii~~~~~~g~~~~~~~~~~~~~~--g~~v~~~~~~~~d--~~~~l~~i~~~~~~vii~~ 213 (433)
T 4f11_A 154 W--------KRVGTLTQDVQRFSEVRNDLTGVLYGE--DIEISDTESFSND--PCTSVKKLKGNDVRIILGQ 213 (433)
T ss_dssp C--------CEEEEEEESSHHHHHHHHHHHHHSSSS--SCEEEEEEEESSC--CHHHHHHHHHTTCCEEEEE
T ss_pred C--------cEEEEEEecchhhHHHHHHHHHHHHHc--CceEEEEeccCcC--HHHHHHHHhhCCCeEEEEe
Confidence 2 58999998763 3 333443433322 4566655443322 3456666777787777665
No 381
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=22.20 E-value=2.5e+02 Score=24.66 Aligned_cols=71 Identities=7% Similarity=-0.010 Sum_probs=36.2
Q ss_pred CeeEEEEEeCC--ch-HHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeC-CCCCchHHHHHHHhc
Q 024345 128 KYKVAVLASKQ--EH-CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC-AKENEREEELLELVQ 203 (269)
Q Consensus 128 ~~riav~~Sg~--g~-~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~-~~~~~~e~~l~~~l~ 203 (269)
+++|.|.|... |. ..+.|++ .| ++|.++.-+. ......++....++.++..| -. +.+.+.++++
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~---~g---~~V~~~~R~~---~~~~~~~l~~~~~v~~v~~D~l~---d~~~l~~~~~ 72 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAA---VG---HHVRAQVHSL---KGLIAEELQAIPNVTLFQGPLLN---NVPLMDTLFE 72 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHH---TT---CCEEEEESCS---CSHHHHHHHTSTTEEEEESCCTT---CHHHHHHHHT
T ss_pred CCEEEEECCCCHHHHHHHHHHHh---CC---CEEEEEECCC---ChhhHHHHhhcCCcEEEECCccC---CHHHHHHHHh
Confidence 46787777554 33 3344444 34 5666554333 12212233222355555443 21 2345667777
Q ss_pred cCCEEEE
Q 024345 204 NTDFLVL 210 (269)
Q Consensus 204 ~~Dlivl 210 (269)
++|.++.
T Consensus 73 ~~d~Vi~ 79 (352)
T 1xgk_A 73 GAHLAFI 79 (352)
T ss_dssp TCSEEEE
T ss_pred cCCEEEE
Confidence 8998873
No 382
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4
Probab=22.18 E-value=2.7e+02 Score=21.33 Aligned_cols=89 Identities=11% Similarity=0.041 Sum_probs=47.5
Q ss_pred CCCeeEEEEEeCCchHHHHHHHhhhcCCCCceEEEE--eeC-CCCC----------------CC-----hhHHHHHHhCC
Q 024345 126 DPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCV--ISN-HDRG----------------PN-----SHVIRFLERHG 181 (269)
Q Consensus 126 ~~~~riav~~Sg~g~~l~~ll~~~~~g~l~~~i~~V--isn-~~~~----------------~~-----~~v~~~a~~~g 181 (269)
...+||.|-..++.....++-.+.+--....++.++ -.- .+.. .. ..+.+.+++.|
T Consensus 15 ~~~~~ILv~vD~s~~s~~al~~A~~lA~~~a~l~ll~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g 94 (163)
T 1tq8_A 15 SAYKTVVVGTDGSDSSMRAVDRAAQIAGADAKLIIASAYLPQHEDARAADILKDESYKVTGTAPIYEILHDAKERAHNAG 94 (163)
T ss_dssp CCCCEEEEECCSSHHHHHHHHHHHHHHTTTSEEEEEEECCC--------------------CCTHHHHHHHHHHHHHTTT
T ss_pred ccCCEEEEEcCCCHHHHHHHHHHHHHhCCCCEEEEEEeeeccCcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 345788888888765444432221111134566655 221 1100 00 12344566789
Q ss_pred CC-eEEeCCCCCchHHHHHHHhc--cCCEEEEEecce
Q 024345 182 IP-YHYLCAKENEREEELLELVQ--NTDFLVLARYMQ 215 (269)
Q Consensus 182 IP-~~~~~~~~~~~e~~l~~~l~--~~Dlivla~y~~ 215 (269)
++ +...-.. .+..+++.+..+ ++|+||+...++
T Consensus 95 v~~v~~~v~~-G~~~~~I~~~a~~~~~DLIV~G~~g~ 130 (163)
T 1tq8_A 95 AKNVEERPIV-GAPVDALVNLADEEKADLLVVGNVGL 130 (163)
T ss_dssp CCEEEEEEEC-SSHHHHHHHHHHHTTCSEEEEECCCC
T ss_pred CCeEEEEEec-CCHHHHHHHHHHhcCCCEEEECCCCC
Confidence 98 6543211 233567777775 899999987654
No 383
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=22.17 E-value=74 Score=27.68 Aligned_cols=39 Identities=3% Similarity=0.109 Sum_probs=21.2
Q ss_pred CCCCeeEEEEEeC-----Cc--hHHHHHHHhhhcCCCCceEEEEeeCC
Q 024345 125 IDPKYKVAVLASK-----QE--HCLVDFLYGWQEGKLPVEITCVISNH 165 (269)
Q Consensus 125 ~~~~~riav~~Sg-----~g--~~l~~ll~~~~~g~l~~~i~~Visn~ 165 (269)
...||||+++... .| ..+..+++.+.+. .++|..+....
T Consensus 17 ~~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~--G~~V~v~~~~~ 62 (406)
T 2gek_A 17 RGSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDA--GHEVSVLAPAS 62 (406)
T ss_dssp ----CEEEEECSSCTTSCCHHHHHHHHHHHHHHHT--TCEEEEEESCC
T ss_pred CCCcceEEEEeccCCCCCCcHHHHHHHHHHHHHHC--CCeEEEEecCC
Confidence 4567899999863 23 3455666665443 36776555544
No 384
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=22.12 E-value=93 Score=30.39 Aligned_cols=33 Identities=18% Similarity=0.410 Sum_probs=26.9
Q ss_pred cceEEEEEEcCCCcChHHHHHHHHHhCCCeEeEeee
Q 024345 40 LTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADV 75 (269)
Q Consensus 40 ~~~~iItV~G~DrpGIVa~VS~~La~~giNI~dl~~ 75 (269)
++++.|+| .|++|++ ++++.|.++|..|....-
T Consensus 10 i~~aLISV--sDK~glv-elAk~L~~lGfeI~ATgG 42 (523)
T 3zzm_A 10 IRRALISV--YDKTGLV-DLAQGLSAAGVEIISTGS 42 (523)
T ss_dssp CCEEEEEE--SSCTTHH-HHHHHHHHTTCEEEECHH
T ss_pred ccEEEEEE--eccccHH-HHHHHHHHCCCEEEEcch
Confidence 46788888 8999977 888999999999986433
No 385
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=22.05 E-value=1e+02 Score=25.32 Aligned_cols=16 Identities=31% Similarity=0.364 Sum_probs=10.6
Q ss_pred CCeeEEEEEeCC-chHH
Q 024345 127 PKYKVAVLASKQ-EHCL 142 (269)
Q Consensus 127 ~~~riav~~Sg~-g~~l 142 (269)
.++||+|+|.|. |..+
T Consensus 27 ~~~~I~iiG~G~~G~~l 43 (215)
T 2vns_A 27 EAPKVGILGSGDFARSL 43 (215)
T ss_dssp --CCEEEECCSHHHHHH
T ss_pred CCCEEEEEccCHHHHHH
Confidence 457999999887 4444
No 386
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=22.00 E-value=3.1e+02 Score=23.94 Aligned_cols=72 Identities=15% Similarity=0.209 Sum_probs=39.3
Q ss_pred CCeeEEEEEeCCc--hHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhc-
Q 024345 127 PKYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ- 203 (269)
Q Consensus 127 ~~~riav~~Sg~g--~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~- 203 (269)
+..+|.|.+...+ ...-.++.. .| +++.++..+.+ -.+++++.|..... +.. .+..+++.+...
T Consensus 159 ~g~~VlV~Gasg~iG~~~~~~a~~--~G---a~Vi~~~~~~~------~~~~~~~~ga~~v~-~~~-~~~~~~v~~~~~~ 225 (342)
T 4eye_A 159 AGETVLVLGAAGGIGTAAIQIAKG--MG---AKVIAVVNRTA------ATEFVKSVGADIVL-PLE-EGWAKAVREATGG 225 (342)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHH--TT---CEEEEEESSGG------GHHHHHHHTCSEEE-ESS-TTHHHHHHHHTTT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHH--cC---CEEEEEeCCHH------HHHHHHhcCCcEEe-cCc-hhHHHHHHHHhCC
Confidence 4467877775333 444344432 45 57766655442 25788888866543 322 223344545443
Q ss_pred -cCCEEEEE
Q 024345 204 -NTDFLVLA 211 (269)
Q Consensus 204 -~~Dlivla 211 (269)
++|+++-+
T Consensus 226 ~g~Dvvid~ 234 (342)
T 4eye_A 226 AGVDMVVDP 234 (342)
T ss_dssp SCEEEEEES
T ss_pred CCceEEEEC
Confidence 58887754
No 387
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=21.88 E-value=3.3e+02 Score=22.27 Aligned_cols=74 Identities=14% Similarity=0.090 Sum_probs=38.7
Q ss_pred HHHHHHHHHhhhhhhccceeeeeecCCCCCeeEEEEEeCCc-hHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHH
Q 024345 99 REQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQE-HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFL 177 (269)
Q Consensus 99 ~~~L~e~L~~la~el~l~~~~~~~~~~~~~~riav~~Sg~g-~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a 177 (269)
...+.+.+++.+++.|. ++.++-+... ......++.+...... -..+....+. ...+..+.+
T Consensus 23 ~~~~~~gi~~~a~~~g~--------------~~~~~~~~~~~~~~~~~~~~l~~~~vd--giI~~~~~~~-~~~~~~~~~ 85 (293)
T 3l6u_A 23 AQRLINAFKAEAKANKY--------------EALVATSQNSRISEREQILEFVHLKVD--AIFITTLDDV-YIGSAIEEA 85 (293)
T ss_dssp HHHHHHHHHHHHHHTTC--------------EEEEEECSSCHHHHHHHHHHHHHTTCS--EEEEECSCTT-TTHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCC--------------EEEEECCCCCHHHHHHHHHHHHHcCCC--EEEEecCChH-HHHHHHHHH
Confidence 46677777777777763 3444444432 2222333333233222 1112222211 123678889
Q ss_pred HhCCCCeEEeCC
Q 024345 178 ERHGIPYHYLCA 189 (269)
Q Consensus 178 ~~~gIP~~~~~~ 189 (269)
.+.|||+..++.
T Consensus 86 ~~~~iPvV~~~~ 97 (293)
T 3l6u_A 86 KKAGIPVFAIDR 97 (293)
T ss_dssp HHTTCCEEEESS
T ss_pred HHcCCCEEEecC
Confidence 999999999873
No 388
>2q8n_A Glucose-6-phosphate isomerase; TM1385, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: 2PE; 1.82A {Thermotoga maritima MSB8}
Probab=21.80 E-value=63 Score=30.88 Aligned_cols=55 Identities=5% Similarity=-0.031 Sum_probs=35.1
Q ss_pred eEEEEEeCCchHHHHHH------Hhhhc--CCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeC
Q 024345 130 KVAVLASKQEHCLVDFL------YGWQE--GKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (269)
Q Consensus 130 riav~~Sg~g~~l~~ll------~~~~~--g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~ 188 (269)
-+++.+|++|++.+.+. +.+.+ |+....++ ++|++ +++++.+.|.++||+++.++
T Consensus 142 TlvIviSKSGtT~ET~~~~~~ar~~l~~~~G~~~~~~V-AvT~~---~~s~L~~~A~~~Gi~~f~~~ 204 (460)
T 2q8n_A 142 TLFNVISKSGSTAEVMATYSIARGILEAYGLDPREHML-ITTDP---EKGFLRKLVKEEGFRSLEVP 204 (460)
T ss_dssp EEEEEECSSSCCHHHHHHHHHHHHHHHHTTCCGGGTEE-EEECS---SSSHHHHHHHHHTCEEEECC
T ss_pred EEEEEEcCCCCCHHHHHHHHHHHHHHHHhcCCccCeEE-EEeCC---CCChHHHHHHHhCCceEeec
Confidence 47889999995444332 11111 32113454 45555 46889999999999888876
No 389
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=21.76 E-value=1.8e+02 Score=25.86 Aligned_cols=73 Identities=11% Similarity=0.158 Sum_probs=40.9
Q ss_pred CCeeEEEEEeCCchHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhc--c
Q 024345 127 PKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ--N 204 (269)
Q Consensus 127 ~~~riav~~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~--~ 204 (269)
+++||.|+++|.. . ..++.+.++ +..+++++ +.++ ++++..++|.+ ++.++. .+.+++.+.++ +
T Consensus 6 ~~~~ilI~g~g~~-~-~~~~~a~~~--~G~~~v~v-~~~~--~~~~~~~~ad~----~~~~~~---~d~~~l~~~~~~~~ 71 (403)
T 4dim_A 6 DNKRLLILGAGRG-Q-LGLYKAAKE--LGIHTIAG-TMPN--AHKPCLNLADE----ISYMDI---SNPDEVEQKVKDLN 71 (403)
T ss_dssp CCCEEEEECCCGG-G-HHHHHHHHH--HTCEEEEE-ECSS--CCHHHHHHCSE----EEECCT---TCHHHHHHHTTTSC
T ss_pred CCCEEEEECCcHh-H-HHHHHHHHH--CCCEEEEE-cCCC--CCCcchhhCCe----EEEecC---CCHHHHHHHHHHcC
Confidence 4679999999863 2 223443332 23666655 4432 35666665543 233332 12356777777 7
Q ss_pred CCEEEEEec
Q 024345 205 TDFLVLARY 213 (269)
Q Consensus 205 ~Dlivla~y 213 (269)
+|.|+..++
T Consensus 72 ~d~v~~~~~ 80 (403)
T 4dim_A 72 LDGAATCCL 80 (403)
T ss_dssp CSEEECCSC
T ss_pred CCEEEeCCc
Confidence 898886443
No 390
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=21.75 E-value=3.5e+02 Score=23.14 Aligned_cols=75 Identities=4% Similarity=-0.070 Sum_probs=37.6
Q ss_pred CeeEEEEEeCCc--h-HHHHHHHhhhcCCCCceEEEEeeCCCCCCC-hhHHHHHH------hCCCCeEEeCCCCCchHHH
Q 024345 128 KYKVAVLASKQE--H-CLVDFLYGWQEGKLPVEITCVISNHDRGPN-SHVIRFLE------RHGIPYHYLCAKENEREEE 197 (269)
Q Consensus 128 ~~riav~~Sg~g--~-~l~~ll~~~~~g~l~~~i~~Visn~~~~~~-~~v~~~a~------~~gIP~~~~~~~~~~~e~~ 197 (269)
++||.|.|...+ . ..+.|++ .| ++|.++.-+.+ .. ....+..+ ..++.++..+.. ..+.
T Consensus 27 ~~~vlVtGatG~iG~~l~~~L~~---~g---~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~---d~~~ 95 (352)
T 1sb8_A 27 PKVWLITGVAGFIGSNLLETLLK---LD---QKVVGLDNFAT--GHQRNLDEVRSLVSEKQWSNFKFIQGDIR---NLDD 95 (352)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHH---TT---CEEEEEECCSS--CCHHHHHHHHHHSCHHHHTTEEEEECCTT---SHHH
T ss_pred CCeEEEECCCcHHHHHHHHHHHH---CC---CEEEEEeCCCc--cchhhHHHHhhhcccccCCceEEEECCCC---CHHH
Confidence 467777766543 3 3344444 34 56665433221 11 12222222 245555554421 2345
Q ss_pred HHHHhccCCEEEEEec
Q 024345 198 LLELVQNTDFLVLARY 213 (269)
Q Consensus 198 l~~~l~~~Dlivla~y 213 (269)
+.++++++|.||-+..
T Consensus 96 ~~~~~~~~d~vih~A~ 111 (352)
T 1sb8_A 96 CNNACAGVDYVLHQAA 111 (352)
T ss_dssp HHHHHTTCSEEEECCS
T ss_pred HHHHhcCCCEEEECCc
Confidence 6677779999876543
No 391
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=21.67 E-value=2e+02 Score=22.51 Aligned_cols=66 Identities=14% Similarity=0.142 Sum_probs=33.2
Q ss_pred eeEEEEEeCC--c-hHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhccC
Q 024345 129 YKVAVLASKQ--E-HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNT 205 (269)
Q Consensus 129 ~riav~~Sg~--g-~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~~~ 205 (269)
|||.|.|... | +..+.|++ +| ++|.++.-++ ....++. .++.++..|..+ .+. +.++++
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~---~g---~~V~~~~R~~-----~~~~~~~--~~~~~~~~D~~d--~~~---~~~~~~ 62 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKN---RG---HEVTAIVRNA-----GKITQTH--KDINILQKDIFD--LTL---SDLSDQ 62 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH---TT---CEEEEEESCS-----HHHHHHC--SSSEEEECCGGG--CCH---HHHTTC
T ss_pred CeEEEEcCCchhHHHHHHHHHh---CC---CEEEEEEcCc-----hhhhhcc--CCCeEEeccccC--hhh---hhhcCC
Confidence 5777777544 3 34444444 35 5666543332 2222222 566666655211 111 555678
Q ss_pred CEEEEEe
Q 024345 206 DFLVLAR 212 (269)
Q Consensus 206 Dlivla~ 212 (269)
|.+|.+.
T Consensus 63 d~vi~~a 69 (221)
T 3ew7_A 63 NVVVDAY 69 (221)
T ss_dssp SEEEECC
T ss_pred CEEEECC
Confidence 8877554
No 392
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=21.57 E-value=36 Score=29.46 Aligned_cols=66 Identities=12% Similarity=0.270 Sum_probs=37.0
Q ss_pred CeeEEEEEeCC-ch-HHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhccC
Q 024345 128 KYKVAVLASKQ-EH-CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNT 205 (269)
Q Consensus 128 ~~riav~~Sg~-g~-~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~~~ 205 (269)
.+||+|+|.|. |. ....|.+ .| ++| .+.|+. ...+.++++++|+. ..+ + +.+.++++
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~~---~g---~~V--~v~~r~---~~~~~~l~~~~g~~--~~~----~----~~~~~~~a 187 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALVK---EG---AKV--FLWNRT---KEKAIKLAQKFPLE--VVN----S----PEEVIDKV 187 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHHH---HT---CEE--EEECSS---HHHHHHHTTTSCEE--ECS----C----GGGTGGGC
T ss_pred CCEEEEECchHHHHHHHHHHHH---cC---CEE--EEEECC---HHHHHHHHHHcCCe--eeh----h----HHhhhcCC
Confidence 46899999886 23 3333333 34 333 566762 34456677777742 221 1 11234589
Q ss_pred CEEEEEecc
Q 024345 206 DFLVLARYM 214 (269)
Q Consensus 206 Dlivla~y~ 214 (269)
|+||++--.
T Consensus 188 DiVi~atp~ 196 (275)
T 2hk9_A 188 QVIVNTTSV 196 (275)
T ss_dssp SEEEECSST
T ss_pred CEEEEeCCC
Confidence 999987543
No 393
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=21.55 E-value=55 Score=25.81 Aligned_cols=31 Identities=10% Similarity=0.104 Sum_probs=24.3
Q ss_pred EEEEEEcCCCcChHHHHHHHHHhCCCeEeEee
Q 024345 43 GIHVFHCPDEVGIVAKLSECIASRGGNILAAD 74 (269)
Q Consensus 43 ~iItV~G~DrpGIVa~VS~~La~~giNI~dl~ 74 (269)
+.++|...|+++++. +++.|.+.|.+|....
T Consensus 27 vliSv~d~dK~~l~~-~a~~l~~lGf~i~AT~ 57 (143)
T 2yvq_A 27 ILIGIQQSFRPRFLG-VAEQLHNEGFKLFATE 57 (143)
T ss_dssp EEEECCGGGHHHHHH-HHHHHHTTTCEEEEEH
T ss_pred EEEEecccchHHHHH-HHHHHHHCCCEEEECc
Confidence 788888888998776 7789998887666543
No 394
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=21.53 E-value=1.7e+02 Score=26.32 Aligned_cols=74 Identities=14% Similarity=0.161 Sum_probs=41.0
Q ss_pred CCCeeEEEEEeCC-chHHHHHHHhhhcCCCCc-eEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhc
Q 024345 126 DPKYKVAVLASKQ-EHCLVDFLYGWQEGKLPV-EITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 203 (269)
Q Consensus 126 ~~~~riav~~Sg~-g~~l~~ll~~~~~g~l~~-~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~ 203 (269)
.+..+|+|.+.|. |...-.+.+. .| + +|.++-.+. .-.++|+++|.... ++.+..+..+++.++..
T Consensus 212 ~~g~~VlV~GaG~vG~~aiqlak~--~G---a~~Vi~~~~~~------~~~~~~~~lGa~~v-i~~~~~~~~~~i~~~t~ 279 (404)
T 3ip1_A 212 RPGDNVVILGGGPIGLAAVAILKH--AG---ASKVILSEPSE------VRRNLAKELGADHV-IDPTKENFVEAVLDYTN 279 (404)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHH--TT---CSEEEEECSCH------HHHHHHHHHTCSEE-ECTTTSCHHHHHHHHTT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHH--cC---CCEEEEECCCH------HHHHHHHHcCCCEE-EcCCCCCHHHHHHHHhC
Confidence 3456899988743 3444444443 34 4 555443333 24688999997644 35332233344555544
Q ss_pred --cCCEEEEE
Q 024345 204 --NTDFLVLA 211 (269)
Q Consensus 204 --~~Dlivla 211 (269)
++|+++-+
T Consensus 280 g~g~D~vid~ 289 (404)
T 3ip1_A 280 GLGAKLFLEA 289 (404)
T ss_dssp TCCCSEEEEC
T ss_pred CCCCCEEEEC
Confidence 58888855
No 395
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=21.41 E-value=3.2e+02 Score=22.78 Aligned_cols=71 Identities=10% Similarity=0.042 Sum_probs=39.7
Q ss_pred HHHHHHHHHhhhhhhccceeeeeecCCCCCeeEEEEEeCCc-hHHHHHHHhhhcCCCCceEEEEeeCCCCCCChh-HHHH
Q 024345 99 REQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQE-HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSH-VIRF 176 (269)
Q Consensus 99 ~~~L~e~L~~la~el~l~~~~~~~~~~~~~~riav~~Sg~g-~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~-v~~~ 176 (269)
...+.+.+++.+++.|. ++.++.+... .....+++.+.... +-++|..... .+.. ..+.
T Consensus 30 ~~~~~~gi~~~a~~~g~--------------~~~~~~~~~~~~~~~~~~~~l~~~~----vdgiI~~~~~-~~~~~~~~~ 90 (303)
T 3kke_A 30 FADMFSGVQMAASGHST--------------DVLLGQIDAPPRGTQQLSRLVSEGR----VDGVLLQRRE-DFDDDMLAA 90 (303)
T ss_dssp HHHHHHHHHHHHHHTTC--------------CEEEEECCSTTHHHHHHHHHHHSCS----SSEEEECCCT-TCCHHHHHH
T ss_pred HHHHHHHHHHHHHHCCC--------------EEEEEeCCCChHHHHHHHHHHHhCC----CcEEEEecCC-CCcHHHHHH
Confidence 57788888888887773 3334444432 23334444443443 2233333222 2334 6677
Q ss_pred HHhCCCCeEEeCC
Q 024345 177 LERHGIPYHYLCA 189 (269)
Q Consensus 177 a~~~gIP~~~~~~ 189 (269)
+.+ |||+..++.
T Consensus 91 l~~-~iPvV~i~~ 102 (303)
T 3kke_A 91 VLE-GVPAVTINS 102 (303)
T ss_dssp HHT-TSCEEEESC
T ss_pred HhC-CCCEEEECC
Confidence 777 999999873
No 396
>3bbn_F Ribosomal protein S6; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=21.41 E-value=3.4e+02 Score=22.31 Aligned_cols=67 Identities=12% Similarity=0.185 Sum_probs=42.5
Q ss_pred CCcceEEEE-EEcCC-----CcChHHHHHHHHHhCCCeEeEeeeecc---------CC---------CCeEEEEEEEEeC
Q 024345 38 PTLTHGIHV-FHCPD-----EVGIVAKLSECIASRGGNILAADVFVP---------EK---------KNVFYSRSEFIFD 93 (269)
Q Consensus 38 ~~~~~~iIt-V~G~D-----rpGIVa~VS~~La~~giNI~dl~~~~~---------~~---------~g~F~m~~~v~~p 93 (269)
+.|..|-+. |+=+| ...+|..+.+.+.+.|+.|.+++..-. .. .|.|. .+.++.+
T Consensus 60 ~~Mr~YE~m~IlrPdl~eeev~alver~~~iI~~~GG~I~~ve~WG~RrLAY~IkK~~kgg~~~~h~eG~Yv-lm~F~a~ 138 (168)
T 3bbn_F 60 PGLRQYETMAVLRPDMTEDERLTLTQKYEELLVAGGAMYVEVFNRGVIPLAYSIKRKNKAGETNNYLDGIYL-LFTYFTK 138 (168)
T ss_dssp --CEEEEEEEEECTTSCHHHHHSTTHHHHHHHTTTSCEEEEEEEEEECCCSSCTTSCSSSCSSCCCCCCEEE-EEEEEEC
T ss_pred CCCCceeEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEecccccccceeccCcccccccccceEEEE-EEEEEeC
Confidence 336677444 44454 357999999999999999999876521 12 35554 5666655
Q ss_pred CCCCCHHHHHHHHH
Q 024345 94 PIKWPREQMDEDFF 107 (269)
Q Consensus 94 ~~~~~~~~L~e~L~ 107 (269)
+ ...++|...|.
T Consensus 139 p--~~I~ELeR~Lr 150 (168)
T 3bbn_F 139 P--ESISPLEAALV 150 (168)
T ss_dssp T--TSSHHHHHHHH
T ss_pred H--HHHHHHHHHhc
Confidence 4 24666766554
No 397
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=21.40 E-value=1.5e+02 Score=26.46 Aligned_cols=75 Identities=13% Similarity=0.229 Sum_probs=38.9
Q ss_pred CCeeEEEEEeCC-chHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCC---CCchHHHHHHHh
Q 024345 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAK---ENEREEELLELV 202 (269)
Q Consensus 127 ~~~riav~~Sg~-g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~---~~~~e~~l~~~l 202 (269)
+-.+|+|.++|. |...-.+++. .|. .+|.++..+. .-.++++++|..... +.+ ..+..+++.+..
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~--~Ga--~~Vi~~~~~~------~~~~~~~~lGa~~vi-~~~~~~~~~~~~~v~~~~ 263 (380)
T 1vj0_A 195 AGKTVVIQGAGPLGLFGVVIARS--LGA--ENVIVIAGSP------NRLKLAEEIGADLTL-NRRETSVEERRKAIMDIT 263 (380)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHH--TTB--SEEEEEESCH------HHHHHHHHTTCSEEE-ETTTSCHHHHHHHHHHHT
T ss_pred CCCEEEEECcCHHHHHHHHHHHH--cCC--ceEEEEcCCH------HHHHHHHHcCCcEEE-eccccCcchHHHHHHHHh
Confidence 446899998554 3444444443 341 3666555443 236788899976443 322 101112333333
Q ss_pred c--cCCEEEEEe
Q 024345 203 Q--NTDFLVLAR 212 (269)
Q Consensus 203 ~--~~Dlivla~ 212 (269)
. .+|+++-+.
T Consensus 264 ~g~g~Dvvid~~ 275 (380)
T 1vj0_A 264 HGRGADFILEAT 275 (380)
T ss_dssp TTSCEEEEEECS
T ss_pred CCCCCcEEEECC
Confidence 2 578877543
No 398
>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0
Probab=21.38 E-value=1.7e+02 Score=18.82 Aligned_cols=63 Identities=13% Similarity=0.120 Sum_probs=43.1
Q ss_pred cceEEEEEEcCCCcChHHHHHHHHHhC-CCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHhhh
Q 024345 40 LTHGIHVFHCPDEVGIVAKLSECIASR-GGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLS 110 (269)
Q Consensus 40 ~~~~iItV~G~DrpGIVa~VS~~La~~-giNI~dl~~~~~~~~g~F~m~~~v~~p~~~~~~~~L~e~L~~la 110 (269)
|++..+.|.|-+-.+=+..|.+.|.+. |+.-.+++. . .+ .+.+...+...+.+++.+++++.+
T Consensus 1 M~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~--~--~~----~~~v~~~~~~~~~~~i~~~i~~~G 64 (74)
T 3dxs_X 1 MRKIQVGVTGMTCAACSNSVEAALMNVNGVFKASVAL--L--QN----RADVVFDPNLVKEEDIKEEIEDAG 64 (74)
T ss_dssp CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEEG--G--GT----EEEEEECTTTCCHHHHHHHHHHHT
T ss_pred CcEEEEEECCcCCHHHHHHHHHHHhcCCCEEEEEEEe--c--CC----EEEEEECCCCCCHHHHHHHHHHCC
Confidence 467789999999999999999999886 443333322 2 22 234444332467889999988765
No 399
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=21.37 E-value=2e+02 Score=23.51 Aligned_cols=70 Identities=17% Similarity=0.212 Sum_probs=38.3
Q ss_pred HHHHHHHHHhhhhhhccceeeeeecCCCCCeeEEEEEeCCc-hHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHH-H
Q 024345 99 REQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQE-HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIR-F 176 (269)
Q Consensus 99 ~~~L~e~L~~la~el~l~~~~~~~~~~~~~~riav~~Sg~g-~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~-~ 176 (269)
...+.+.+++.+++.|. ++.++.+... .....+++.+.... +-++|... .+....+ .
T Consensus 23 ~~~~~~gi~~~~~~~g~--------------~~~~~~~~~~~~~~~~~~~~l~~~~----~dgiIi~~---~~~~~~~~~ 81 (277)
T 3e61_A 23 FTLIARGVEDVALAHGY--------------QVLIGNSDNDIKKAQGYLATFVSHN----CTGMISTA---FNENIIENT 81 (277)
T ss_dssp HHHHHHHHHHHHHHTTC--------------CEEEEECTTCHHHHHHHHHHHHHTT----CSEEEECG---GGHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCC--------------EEEEEeCCCCHHHHHHHHHHHHhCC----CCEEEEec---CChHHHHHH
Confidence 46667777777777663 3444444443 22233444433332 22333333 2344677 8
Q ss_pred HHhCCCCeEEeCC
Q 024345 177 LERHGIPYHYLCA 189 (269)
Q Consensus 177 a~~~gIP~~~~~~ 189 (269)
+.+.|||+..++.
T Consensus 82 l~~~~iPvV~~~~ 94 (277)
T 3e61_A 82 LTDHHIPFVFIDR 94 (277)
T ss_dssp HHHC-CCEEEGGG
T ss_pred HHcCCCCEEEEec
Confidence 8999999999873
No 400
>1jx6_A LUXP protein; protein-ligand complex, signaling protein; HET: AI2; 1.50A {Vibrio harveyi} SCOP: c.93.1.1 PDB: 1zhh_A* 2hj9_A*
Probab=21.36 E-value=3.7e+02 Score=22.70 Aligned_cols=37 Identities=14% Similarity=0.029 Sum_probs=23.2
Q ss_pred HHHHHHHHhhhhhhccceeeeeecCCCCCeeEEEEEeC
Q 024345 100 EQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASK 137 (269)
Q Consensus 100 ~~L~e~L~~la~el~l~~~~~~~~~~~~~~riav~~Sg 137 (269)
++-++...+.++++|-.-..... ...+..+|+++...
T Consensus 16 ~~tr~rV~~aa~elgY~pn~~Ar-~~~~~~~Igvi~~~ 52 (342)
T 1jx6_A 16 PEQRNLTNALSEAVRAQPVPLSK-PTQRPIKISVVYPG 52 (342)
T ss_dssp HHHHHHHHHHHHHHHSCCCCCSS-CCSSCEEEEEEECC
T ss_pred HHHHHHHHHHHHHhcCCCCcccc-ccCCceEEEEEecC
Confidence 55677888888898853221111 23455678888865
No 401
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=21.34 E-value=2.6e+02 Score=24.73 Aligned_cols=78 Identities=12% Similarity=0.058 Sum_probs=35.3
Q ss_pred CCCCeeEEEEE-eCC-chHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHh
Q 024345 125 IDPKYKVAVLA-SKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELV 202 (269)
Q Consensus 125 ~~~~~riav~~-Sg~-g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l 202 (269)
+.+++||+|.| +|. |..+...|. +.| +..+|.++=.+. ....+.++.. ...|...... ....++.+.+
T Consensus 5 ~~~~mKI~ViGAaG~VG~~la~~L~--~~g-~~~ev~l~Di~~---~~~~~~dL~~-~~~~~~v~~~---~~t~d~~~al 74 (326)
T 1smk_A 5 GAPGFKVAILGAAGGIGQPLAMLMK--MNP-LVSVLHLYDVVN---APGVTADISH-MDTGAVVRGF---LGQQQLEAAL 74 (326)
T ss_dssp ---CEEEEEETTTSTTHHHHHHHHH--HCT-TEEEEEEEESSS---HHHHHHHHHT-SCSSCEEEEE---ESHHHHHHHH
T ss_pred CCCCCEEEEECCCChHHHHHHHHHH--hCC-CCCEEEEEeCCC---cHhHHHHhhc-ccccceEEEE---eCCCCHHHHc
Confidence 44678999999 788 544433332 133 224665532222 1112222322 2223211100 0122445667
Q ss_pred ccCCEEEEEe
Q 024345 203 QNTDFLVLAR 212 (269)
Q Consensus 203 ~~~Dlivla~ 212 (269)
+++|++|.+.
T Consensus 75 ~gaDvVi~~a 84 (326)
T 1smk_A 75 TGMDLIIVPA 84 (326)
T ss_dssp TTCSEEEECC
T ss_pred CCCCEEEEcC
Confidence 7899987764
No 402
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=21.33 E-value=92 Score=26.06 Aligned_cols=16 Identities=13% Similarity=0.275 Sum_probs=11.6
Q ss_pred eeEEEEEeCC-chHHHH
Q 024345 129 YKVAVLASKQ-EHCLVD 144 (269)
Q Consensus 129 ~riav~~Sg~-g~~l~~ 144 (269)
|||+|+|.|. |..+-.
T Consensus 1 M~I~iIG~G~mG~~la~ 17 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLAS 17 (264)
T ss_dssp CEEEEESCSHHHHHHHH
T ss_pred CeEEEEechHHHHHHHH
Confidence 5899999988 455433
No 403
>3e3m_A Transcriptional regulator, LACI family; structural genomics, DNA-binding, plasmid, transcription regulation, PSI-2; 1.60A {Silicibacter pomeroyi}
Probab=21.31 E-value=2.5e+02 Score=24.24 Aligned_cols=89 Identities=21% Similarity=0.214 Sum_probs=0.0
Q ss_pred HHHHHHHHhhhhhhcccee-eeeecCCCCCeeEEEEEeCCc-hHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHH
Q 024345 100 EQMDEDFFKLSKMFNAMRS-VVRVPDIDPKYKVAVLASKQE-HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFL 177 (269)
Q Consensus 100 ~~L~e~L~~la~el~l~~~-~~~~~~~~~~~riav~~Sg~g-~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a 177 (269)
++-++...+.++++|-.-. .-+.-...+...|+++..... ..+..+++. +.+.|
T Consensus 41 ~~tr~rV~~~a~~lgY~pn~~a~~l~~~~~~~Igvi~~~~~~~~~~~~~~g------------------------i~~~a 96 (355)
T 3e3m_A 41 SETRERILKVVKDMNYVPDQVAGSLTTKRSGFVGLLLPSLNNLHFAQTAQS------------------------LTDVL 96 (355)
T ss_dssp ------------------------------CEEEEEESCSBCHHHHHHHHH------------------------HHHHH
T ss_pred HHHHHHHHHHHHHhCCCcCHHHHhhhcCCCCEEEEEeCCCCchHHHHHHHH------------------------HHHHH
Q ss_pred HhCCCCeEEeC-CCCCchHHHHHHHhc--cCCEEEEEe
Q 024345 178 ERHGIPYHYLC-AKENEREEELLELVQ--NTDFLVLAR 212 (269)
Q Consensus 178 ~~~gIP~~~~~-~~~~~~e~~l~~~l~--~~Dlivla~ 212 (269)
+++|.-+...+ ......+.++++.+. ++|-+|+.+
T Consensus 97 ~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdGiI~~~ 134 (355)
T 3e3m_A 97 EQGGLQLLLGYTAYSPEREEQLVETMLRRRPEAMVLSY 134 (355)
T ss_dssp HHTTCEEEEEECTTCHHHHHHHHHHHHHTCCSEEEEEC
T ss_pred HHCCCEEEEEeCCCChHHHHHHHHHHHhCCCCEEEEeC
No 404
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=21.12 E-value=2.9e+02 Score=22.54 Aligned_cols=64 Identities=22% Similarity=0.279 Sum_probs=0.0
Q ss_pred CCCCeeEEEEEeCCc-hHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeC-CCCCchHHHHHHHh
Q 024345 125 IDPKYKVAVLASKQE-HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC-AKENEREEELLELV 202 (269)
Q Consensus 125 ~~~~~riav~~Sg~g-~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~-~~~~~~e~~l~~~l 202 (269)
+.+..+|+++..... .-...+++. +.+.|+++|.-+...+ ......+.++++.+
T Consensus 4 ~~~s~~Igvi~~~~~~~~~~~~~~g------------------------i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l 59 (276)
T 3jy6_A 4 TQSSKLIAVIVANIDDYFSTELFKG------------------------ISSILESRGYIGVLFDANADIEREKTLLRAI 59 (276)
T ss_dssp -CCCCEEEEEESCTTSHHHHHHHHH------------------------HHHHHHTTTCEEEEEECTTCHHHHHHHHHHH
T ss_pred CCCCcEEEEEeCCCCchHHHHHHHH------------------------HHHHHHHCCCEEEEEeCCCCHHHHHHHHHHH
Q ss_pred c--cCCEEEEEe
Q 024345 203 Q--NTDFLVLAR 212 (269)
Q Consensus 203 ~--~~Dlivla~ 212 (269)
. ++|-||+.+
T Consensus 60 ~~~~vdgiIi~~ 71 (276)
T 3jy6_A 60 GSRGFDGLILQS 71 (276)
T ss_dssp HTTTCSEEEEES
T ss_pred HhCCCCEEEEec
No 405
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=21.11 E-value=1.4e+02 Score=24.94 Aligned_cols=66 Identities=15% Similarity=0.160 Sum_probs=34.5
Q ss_pred CeeEEEEEeCC-chHH-HHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhc-c
Q 024345 128 KYKVAVLASKQ-EHCL-VDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ-N 204 (269)
Q Consensus 128 ~~riav~~Sg~-g~~l-~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~-~ 204 (269)
++||.|.|+|. |+.+ +.|++ .| ++|.++.-+.+ +. ..++.++..+-.+ .+.+.++++ +
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~---~g---~~V~~~~r~~~---~~-------~~~~~~~~~Dl~d---~~~~~~~~~~~ 63 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTA---QG---HEVTGLRRSAQ---PM-------PAGVQTLIADVTR---PDTLASIVHLR 63 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHH---TT---CCEEEEECTTS---CC-------CTTCCEEECCTTC---GGGCTTGGGGC
T ss_pred CCcEEEECCCHHHHHHHHHHHH---CC---CEEEEEeCCcc---cc-------ccCCceEEccCCC---hHHHHHhhcCC
Confidence 46899888543 3333 44443 34 56766544432 11 2566777655221 123344555 4
Q ss_pred CCEEEEEe
Q 024345 205 TDFLVLAR 212 (269)
Q Consensus 205 ~Dlivla~ 212 (269)
+|.||-..
T Consensus 64 ~d~vih~a 71 (286)
T 3gpi_A 64 PEILVYCV 71 (286)
T ss_dssp CSEEEECH
T ss_pred CCEEEEeC
Confidence 88877543
No 406
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=21.10 E-value=3.4e+02 Score=23.25 Aligned_cols=83 Identities=11% Similarity=0.119 Sum_probs=45.3
Q ss_pred CCeeEEEEEeCC-chHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhccC
Q 024345 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNT 205 (269)
Q Consensus 127 ~~~riav~~Sg~-g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~~~ 205 (269)
+.++|+|+|.|. |..+-..+.. .| .+| ++.++. ..-.+.+.+.|+.+... .++.++++++
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~--~G---~~V--~~~dr~----~~~~~~~~~~g~~~~~~--------~~l~~~l~~a 214 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAA--LG---AKV--KVGARE----SDLLARIAEMGMEPFHI--------SKAAQELRDV 214 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH--TT---CEE--EEEESS----HHHHHHHHHTTSEEEEG--------GGHHHHTTTC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHh--CC---CEE--EEEECC----HHHHHHHHHCCCeecCh--------hhHHHHhcCC
Confidence 457999999887 4444333332 34 444 344442 11233455677643311 1244566789
Q ss_pred CEEEEEecceeee---cccccc--cccc
Q 024345 206 DFLVLARYMQVNR---IRLYVA--QLFS 228 (269)
Q Consensus 206 Dlivla~y~~il~---l~~~~~--~~iN 228 (269)
|+|+++--..++. ++..+. -+||
T Consensus 215 DvVi~~~p~~~i~~~~l~~mk~~~~lin 242 (293)
T 3d4o_A 215 DVCINTIPALVVTANVLAEMPSHTFVID 242 (293)
T ss_dssp SEEEECCSSCCBCHHHHHHSCTTCEEEE
T ss_pred CEEEECCChHHhCHHHHHhcCCCCEEEE
Confidence 9999986655554 443332 3577
No 407
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=21.05 E-value=2.4e+02 Score=23.90 Aligned_cols=74 Identities=8% Similarity=0.074 Sum_probs=34.4
Q ss_pred eeEEEEEeCCc---hHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhC-CCCeEEeCCCCCchHHHHHHHhcc
Q 024345 129 YKVAVLASKQE---HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERH-GIPYHYLCAKENEREEELLELVQN 204 (269)
Q Consensus 129 ~riav~~Sg~g---~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~-gIP~~~~~~~~~~~e~~l~~~l~~ 204 (269)
|||.|.|...+ +..+.|++ .| ++|.++.-+..+ ......+..... ++.++..+-. ..+.+.+++++
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~---~g---~~V~~~~r~~~~-~~~~~~~~l~~~~~~~~~~~Dl~---d~~~~~~~~~~ 71 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALS---QG---IDLIVFDNLSRK-GATDNLHWLSSLGNFEFVHGDIR---NKNDVTRLITK 71 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH---TT---CEEEEEECCCST-THHHHHHHHHTTCCCEEEECCTT---CHHHHHHHHHH
T ss_pred cEEEEeCCCchhHHHHHHHHHh---CC---CEEEEEeCCCcc-CchhhhhhhccCCceEEEEcCCC---CHHHHHHHHhc
Confidence 56666664442 33344444 35 566654322111 111112222222 3555555421 23456666664
Q ss_pred --CCEEEEEe
Q 024345 205 --TDFLVLAR 212 (269)
Q Consensus 205 --~Dlivla~ 212 (269)
+|.||-..
T Consensus 72 ~~~d~vih~A 81 (347)
T 1orr_A 72 YMPDSCFHLA 81 (347)
T ss_dssp HCCSEEEECC
T ss_pred cCCCEEEECC
Confidence 99988544
No 408
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=21.01 E-value=3e+02 Score=24.73 Aligned_cols=73 Identities=18% Similarity=0.129 Sum_probs=39.6
Q ss_pred CCeeEEEEEeCCchHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhc--c
Q 024345 127 PKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ--N 204 (269)
Q Consensus 127 ~~~riav~~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~--~ 204 (269)
+++||+|+++|. .-..++.++++ +.+++..+-+++ +++....|.+ ++..+. .+.+++.+.++ +
T Consensus 18 ~~~~ili~g~g~--~g~~~~~a~~~--~G~~v~~v~~~~----~~~~~~~ad~----~~~~~~---~d~~~l~~~~~~~~ 82 (433)
T 2dwc_A 18 SAQKILLLGSGE--LGKEIAIEAQR--LGVEVVAVDRYA----NAPAMQVAHR----SYVGNM---MDKDFLWSVVEREK 82 (433)
T ss_dssp TCCEEEEESCSH--HHHHHHHHHHH--TTCEEEEEESST----TCHHHHHSSE----EEESCT---TCHHHHHHHHHHHC
T ss_pred CCCEEEEECCCH--HHHHHHHHHHH--CCCEEEEEECCC----CChhhhhcce----EEECCC---CCHHHHHHHHHHcC
Confidence 457999998763 23344444443 246776555543 3444444432 233332 12346777765 8
Q ss_pred CCEEEEEecce
Q 024345 205 TDFLVLARYMQ 215 (269)
Q Consensus 205 ~Dlivla~y~~ 215 (269)
+|+|+. ++..
T Consensus 83 ~d~V~~-~~e~ 92 (433)
T 2dwc_A 83 PDAIIP-EIEA 92 (433)
T ss_dssp CSEEEE-CSSC
T ss_pred CCEEEE-Cccc
Confidence 998765 4543
No 409
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=20.85 E-value=2.6e+02 Score=23.05 Aligned_cols=42 Identities=24% Similarity=0.144 Sum_probs=19.7
Q ss_pred HHHHHHhCCCCeEEeCCCCC-chHHHHHHHhc--cCCEEEEEecc
Q 024345 173 VIRFLERHGIPYHYLCAKEN-EREEELLELVQ--NTDFLVLARYM 214 (269)
Q Consensus 173 v~~~a~~~gIP~~~~~~~~~-~~e~~l~~~l~--~~Dlivla~y~ 214 (269)
+.+.|+++|..+...+.... ..+.++++.+. ++|-||+.+..
T Consensus 30 i~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~ 74 (291)
T 3egc_A 30 VESEARHKGYSVLLANTAEDIVREREAVGQFFERRVDGLILAPSE 74 (291)
T ss_dssp HHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCCS
T ss_pred HHHHHHHCCCEEEEEeCCCCHHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 44555666665555442211 11223333333 56666665543
No 410
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=20.65 E-value=2.8e+02 Score=24.44 Aligned_cols=40 Identities=15% Similarity=0.222 Sum_probs=18.3
Q ss_pred HHHHHHhCCCCeEEeCCCCCchHHHHH-HHhc-cCCEEEEEe
Q 024345 173 VIRFLERHGIPYHYLCAKENEREEELL-ELVQ-NTDFLVLAR 212 (269)
Q Consensus 173 v~~~a~~~gIP~~~~~~~~~~~e~~l~-~~l~-~~Dlivla~ 212 (269)
+.++.+++|+.+............++. +... ++|+||++|
T Consensus 49 i~~~l~~~g~~~~~~~t~~~~~~~~~~~~~~~~~~d~vvv~G 90 (332)
T 2bon_A 49 AIMLLREEGMTIHVRVTWEKGDAARYVEEARKFGVATVIAGG 90 (332)
T ss_dssp HHHHHHTTTCCEEEEECCSTTHHHHHHHHHHHHTCSEEEEEE
T ss_pred HHHHHHHcCCcEEEEEecCcchHHHHHHHHHhcCCCEEEEEc
Confidence 445556666666554321111111222 2223 677777665
No 411
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=20.65 E-value=81 Score=29.69 Aligned_cols=68 Identities=15% Similarity=0.189 Sum_probs=35.9
Q ss_pred CeeEEEEEeCC-chHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhC---CCCeEEeCCCCCchHHHHHHHhc
Q 024345 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERH---GIPYHYLCAKENEREEELLELVQ 203 (269)
Q Consensus 128 ~~riav~~Sg~-g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~---gIP~~~~~~~~~~~e~~l~~~l~ 203 (269)
++||+|+|.|. |.++-..+.. .| ++| .+.|+ ....+.++++++ |+. ... + -+++.+.++
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~--~G---~~V--~v~dr---~~~~~~~l~~~~~~~gi~--~~~----s-~~e~v~~l~ 67 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVES--RG---YTV--AIYNR---TTSKTEEVFKEHQDKNLV--FTK----T-LEEFVGSLE 67 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHH--TT---CCE--EEECS---SHHHHHHHHHHTTTSCEE--ECS----S-HHHHHHTBC
T ss_pred CCcEEEEeeHHHHHHHHHHHHh--CC---CEE--EEEcC---CHHHHHHHHHhCcCCCeE--EeC----C-HHHHHhhcc
Confidence 47999999998 5665443332 34 454 35565 234455666655 432 111 1 123333233
Q ss_pred cCCEEEEEe
Q 024345 204 NTDFLVLAR 212 (269)
Q Consensus 204 ~~Dlivla~ 212 (269)
++|+|+++-
T Consensus 68 ~aDvVilav 76 (474)
T 2iz1_A 68 KPRRIMLMV 76 (474)
T ss_dssp SSCEEEECC
T ss_pred CCCEEEEEc
Confidence 488887764
No 412
>3bfj_A 1,3-propanediol oxidoreductase; opportunistic pathogens, decamer, structural genomics,struct proteomics in europe, spine; 2.70A {Klebsiella pneumoniae}
Probab=20.64 E-value=4.6e+02 Score=23.49 Aligned_cols=84 Identities=10% Similarity=0.112 Sum_probs=50.6
Q ss_pred eeEEEEEeCCchHHHHHHHhhhcCCCCceEEEEeeCCCCCCC-----hhHHHHHHhCCCCeEEeCC-CCCchH---HHHH
Q 024345 129 YKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPN-----SHVIRFLERHGIPYHYLCA-KENERE---EELL 199 (269)
Q Consensus 129 ~riav~~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~-----~~v~~~a~~~gIP~~~~~~-~~~~~e---~~l~ 199 (269)
.|| +|+.|.-..+.+++... | .+=++||+++.-.+. ..+.+..++.|+.+..++. ..+... +++.
T Consensus 12 ~~i-~~G~g~~~~l~~~l~~~--g---~~~~livtd~~~~~~~~g~~~~v~~~L~~~g~~~~~~~~~~~~p~~~~v~~~~ 85 (387)
T 3bfj_A 12 NVN-FFGPNAISVVGERCQLL--G---GKKALLVTDKGLRAIKDGAVDKTLHYLREAGIEVAIFDGVEPNPKDTNVRDGL 85 (387)
T ss_dssp SEE-EESTTGGGGHHHHHHHT--T---CSEEEEECCTTTC--CCSSHHHHHHHHHHTTCEEEEECCCCSSCBHHHHHHHH
T ss_pred CeE-EECCCHHHHHHHHHHHc--C---CCEEEEEECcchhhccchHHHHHHHHHHHcCCeEEEECCccCCCCHHHHHHHH
Confidence 455 56666556666666542 3 245677887532111 2345556788999877762 222222 3455
Q ss_pred HHhc--cCCEEEEEecceeee
Q 024345 200 ELVQ--NTDFLVLARYMQVNR 218 (269)
Q Consensus 200 ~~l~--~~Dlivla~y~~il~ 218 (269)
+.++ ++|+||-.|=+.++.
T Consensus 86 ~~~~~~~~d~IIavGGGsv~D 106 (387)
T 3bfj_A 86 AVFRREQCDIIVTVGGGSPHD 106 (387)
T ss_dssp HHHHHTTCCEEEEEESHHHHH
T ss_pred HHHHhcCCCEEEEeCCcchhh
Confidence 5554 899999999888888
No 413
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=20.61 E-value=1.3e+02 Score=26.75 Aligned_cols=68 Identities=10% Similarity=-0.008 Sum_probs=39.1
Q ss_pred CCeeEEEEEeCCc--hHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCC---CCeEEeCCCCCchHHHHHHH
Q 024345 127 PKYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHG---IPYHYLCAKENEREEELLEL 201 (269)
Q Consensus 127 ~~~riav~~Sg~g--~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~g---IP~~~~~~~~~~~e~~l~~~ 201 (269)
..+|++|+|+|.- ..++++... .+ .+.+ .+.|+. .....+++++++ +++. .+ + +-+.
T Consensus 124 ~~~~v~iIGaG~~a~~~~~al~~~--~~---~~~V-~v~~r~---~~~a~~la~~~~~~~~~~~-~~----~----~~e~ 185 (322)
T 1omo_A 124 NSSVFGFIGCGTQAYFQLEALRRV--FD---IGEV-KAYDVR---EKAAKKFVSYCEDRGISAS-VQ----P----AEEA 185 (322)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHH--SC---CCEE-EEECSS---HHHHHHHHHHHHHTTCCEE-EC----C----HHHH
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHh--CC---ccEE-EEECCC---HHHHHHHHHHHHhcCceEE-EC----C----HHHH
Confidence 4579999999863 344555442 12 2333 355662 345666666543 6655 33 1 2245
Q ss_pred hccCCEEEEEec
Q 024345 202 VQNTDFLVLARY 213 (269)
Q Consensus 202 l~~~Dlivla~y 213 (269)
+ ++|+|+++--
T Consensus 186 v-~aDvVi~aTp 196 (322)
T 1omo_A 186 S-RCDVLVTTTP 196 (322)
T ss_dssp T-SSSEEEECCC
T ss_pred h-CCCEEEEeeC
Confidence 5 7999998754
No 414
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=20.50 E-value=2.4e+02 Score=24.53 Aligned_cols=74 Identities=14% Similarity=0.184 Sum_probs=40.2
Q ss_pred CCCeeEEEEEeCC-chHHHHHHHhhhcCCCCceEEEEeeCCCCCCChhHHHHHHhCCCCeEEeCCCCCchHHHHHHHhcc
Q 024345 126 DPKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQN 204 (269)
Q Consensus 126 ~~~~riav~~Sg~-g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~e~~l~~~l~~ 204 (269)
.+..+|.|.++|. |...-.+++. .| ++|.++..+. .-.+++++.|..... +.+..+..+++.+...+
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~--~G---a~Vi~~~~~~------~~~~~~~~lGa~~~i-~~~~~~~~~~~~~~~g~ 232 (340)
T 3s2e_A 165 RPGQWVVISGIGGLGHVAVQYARA--MG---LRVAAVDIDD------AKLNLARRLGAEVAV-NARDTDPAAWLQKEIGG 232 (340)
T ss_dssp CTTSEEEEECCSTTHHHHHHHHHH--TT---CEEEEEESCH------HHHHHHHHTTCSEEE-ETTTSCHHHHHHHHHSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHH--CC---CeEEEEeCCH------HHHHHHHHcCCCEEE-eCCCcCHHHHHHHhCCC
Confidence 3556899988765 4555455543 35 5665554433 246789999976544 42222222333331115
Q ss_pred CCEEEEE
Q 024345 205 TDFLVLA 211 (269)
Q Consensus 205 ~Dlivla 211 (269)
+|+++-+
T Consensus 233 ~d~vid~ 239 (340)
T 3s2e_A 233 AHGVLVT 239 (340)
T ss_dssp EEEEEES
T ss_pred CCEEEEe
Confidence 6776654
No 415
>1gtd_A MTH169; synthetase, FGAM synthetase, purine synthesis pathway, PSI, protein structure initiative, NESG; 2.56A {Methanobacterium thermoautotrophicum} SCOP: d.284.1.1
Probab=20.08 E-value=2.4e+02 Score=20.11 Aligned_cols=60 Identities=12% Similarity=0.086 Sum_probs=38.7
Q ss_pred ceEEEEEEcCCCcChH----HHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHhhhhhh
Q 024345 41 THGIHVFHCPDEVGIV----AKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMF 113 (269)
Q Consensus 41 ~~~iItV~G~DrpGIV----a~VS~~La~~giNI~dl~~~~~~~~g~F~m~~~v~~p~~~~~~~~L~e~L~~la~el 113 (269)
+.+.|.|. .|||+. .+|.+.|..+|.++.++++ +..|. ++++ + .+.++-++..+.+|+++
T Consensus 3 ~~~~V~V~--lK~gVlDpqG~av~~al~~LG~~v~~VR~-----gK~~~--l~~~--~--~~~~~a~~~v~~~~~~L 66 (85)
T 1gtd_A 3 FMVEVRIR--LKKGMLNPEAATIERALALLGYEVEDTDT-----TDVIT--FTMD--E--DSLEAVEREVEDMCQRL 66 (85)
T ss_dssp EEEEEEEE--ECTTSCCHHHHHHHHHHHHHTCCCEEEEE-----EEEEE--EEEC--C--SCHHHHHHHHHHHHHHT
T ss_pred eEEEEEEE--ECCCCcCcHHHHHHHHHHHcCCChheEEE-----EEEEE--EEec--C--CCHHHHHHHHHHHHHHh
Confidence 44445543 345543 4777888999999988888 23444 3333 2 24566688889999887
No 416
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=20.07 E-value=2.2e+02 Score=25.09 Aligned_cols=9 Identities=44% Similarity=0.519 Sum_probs=5.7
Q ss_pred cCCEEEEEe
Q 024345 204 NTDFLVLAR 212 (269)
Q Consensus 204 ~~Dlivla~ 212 (269)
++|+||++|
T Consensus 80 ~~d~vvv~G 88 (337)
T 2qv7_A 80 NYDVLIAAG 88 (337)
T ss_dssp TCSEEEEEE
T ss_pred CCCEEEEEc
Confidence 567666665
Done!