Query 024349
Match_columns 269
No_of_seqs 263 out of 1204
Neff 5.2
Searched_HMMs 29240
Date Mon Mar 25 06:43:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024349.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024349hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lvf_P GAPDH 1, glyceraldehyde 100.0 3E-64 1E-68 473.6 19.1 179 85-268 3-182 (338)
2 3doc_A Glyceraldehyde 3-phosph 100.0 2.1E-64 7.2E-69 474.3 18.0 181 85-268 1-182 (335)
3 4dib_A GAPDH, glyceraldehyde 3 100.0 6.3E-64 2.1E-68 472.3 17.7 180 85-268 3-183 (345)
4 3pym_A GAPDH 3, glyceraldehyde 100.0 2.1E-63 7.1E-68 467.1 19.6 176 87-268 2-179 (332)
5 3v1y_O PP38, glyceraldehyde-3- 100.0 8.4E-63 2.9E-67 463.8 17.1 178 86-268 3-183 (337)
6 3ids_C GAPDH, glyceraldehyde-3 100.0 7.2E-63 2.4E-67 467.2 15.8 182 85-268 1-196 (359)
7 3h9e_O Glyceraldehyde-3-phosph 100.0 7.2E-62 2.4E-66 458.8 18.9 177 85-268 6-185 (346)
8 3hja_A GAPDH, glyceraldehyde-3 100.0 1.3E-61 4.4E-66 458.2 13.6 178 85-268 20-203 (356)
9 1obf_O Glyceraldehyde 3-phosph 100.0 7.4E-59 2.5E-63 437.1 19.1 179 87-268 2-183 (335)
10 2b4r_O Glyceraldehyde-3-phosph 100.0 1.3E-58 4.4E-63 436.8 16.7 178 86-268 11-190 (345)
11 2ep7_A GAPDH, glyceraldehyde-3 100.0 2.7E-58 9.2E-63 434.3 14.6 179 85-268 1-181 (342)
12 2g82_O GAPDH, glyceraldehyde-3 100.0 8.6E-54 2.9E-58 402.0 17.5 177 87-268 1-178 (331)
13 2d2i_A Glyceraldehyde 3-phosph 100.0 2.5E-53 8.5E-58 405.3 17.7 182 85-268 1-184 (380)
14 1rm4_O Glyceraldehyde 3-phosph 100.0 6.5E-53 2.2E-57 396.9 17.7 181 86-268 1-182 (337)
15 3b1j_A Glyceraldehyde 3-phosph 100.0 2.6E-52 9E-57 392.8 19.9 182 85-268 1-184 (339)
16 3cmc_O GAPDH, glyceraldehyde-3 100.0 5.7E-51 1.9E-55 383.0 17.3 179 86-268 1-180 (334)
17 3cps_A Glyceraldehyde 3-phosph 100.0 7.4E-51 2.5E-55 385.2 16.0 180 85-268 16-197 (354)
18 1gad_O D-glyceraldehyde-3-phos 100.0 1.7E-50 6E-55 379.1 16.6 176 87-268 2-178 (330)
19 1hdg_O Holo-D-glyceraldehyde-3 100.0 3.6E-50 1.2E-54 377.3 16.5 178 87-268 1-180 (332)
20 2x5j_O E4PDH, D-erythrose-4-ph 100.0 1.4E-49 4.6E-54 374.2 17.1 179 85-268 1-184 (339)
21 3e5r_O PP38, glyceraldehyde-3- 100.0 3.7E-49 1.3E-53 370.9 17.1 179 85-268 2-183 (337)
22 1u8f_O GAPDH, glyceraldehyde-3 100.0 5.8E-49 2E-53 368.7 16.9 178 85-268 2-181 (335)
23 2yyy_A Glyceraldehyde-3-phosph 100.0 4.2E-41 1.4E-45 316.6 4.8 165 85-268 1-173 (343)
24 1cf2_P Protein (glyceraldehyde 100.0 1.6E-32 5.6E-37 257.0 2.8 163 86-268 1-169 (337)
25 2yv3_A Aspartate-semialdehyde 100.0 7E-30 2.4E-34 238.7 14.6 151 87-268 1-154 (331)
26 1b7g_O Protein (glyceraldehyde 100.0 2E-30 6.8E-35 243.2 7.2 153 87-268 2-168 (340)
27 2r00_A Aspartate-semialdehyde 100.0 6.1E-29 2.1E-33 232.6 14.5 154 86-268 3-160 (336)
28 2czc_A Glyceraldehyde-3-phosph 100.0 5.5E-30 1.9E-34 238.7 5.0 163 85-268 1-168 (334)
29 2hjs_A USG-1 protein homolog; 100.0 8.9E-29 3E-33 231.8 12.7 155 85-268 5-162 (340)
30 1t4b_A Aspartate-semialdehyde 99.9 9.2E-29 3.2E-33 234.4 2.3 154 87-268 2-164 (367)
31 2ep5_A 350AA long hypothetical 99.9 3.6E-26 1.2E-30 214.5 5.7 163 86-268 4-180 (350)
32 3pwk_A Aspartate-semialdehyde 99.9 1E-24 3.6E-29 207.0 14.5 154 85-268 1-157 (366)
33 1xyg_A Putative N-acetyl-gamma 99.9 2.8E-25 9.5E-30 209.6 9.4 155 86-268 16-194 (359)
34 1ys4_A Aspartate-semialdehyde 99.9 1.5E-25 5.1E-30 210.2 6.9 165 85-268 7-186 (354)
35 3tz6_A Aspartate-semialdehyde 99.9 3.2E-24 1.1E-28 202.0 14.8 153 87-268 2-158 (344)
36 2ozp_A N-acetyl-gamma-glutamyl 99.9 1.3E-24 4.5E-29 203.9 12.0 154 86-268 4-180 (345)
37 3pzr_A Aspartate-semialdehyde 99.9 2.6E-25 9.1E-30 211.4 4.5 153 87-268 1-163 (370)
38 3uw3_A Aspartate-semialdehyde 99.9 4.6E-25 1.6E-29 210.2 3.5 154 86-268 4-167 (377)
39 4dpk_A Malonyl-COA/succinyl-CO 99.9 1.9E-22 6.6E-27 190.7 4.9 164 85-268 6-182 (359)
40 4dpl_A Malonyl-COA/succinyl-CO 99.9 1.9E-22 6.6E-27 190.7 4.7 164 85-268 6-182 (359)
41 2nqt_A N-acetyl-gamma-glutamyl 99.8 7.2E-21 2.5E-25 179.5 8.2 157 86-268 9-188 (352)
42 3hsk_A Aspartate-semialdehyde 99.8 1E-20 3.5E-25 180.4 8.4 164 85-268 18-202 (381)
43 3dr3_A N-acetyl-gamma-glutamyl 99.8 7E-20 2.4E-24 172.0 5.0 161 86-268 4-189 (337)
44 1vkn_A N-acetyl-gamma-glutamyl 99.6 3.5E-16 1.2E-20 147.9 5.3 152 85-268 12-188 (351)
45 1nvm_B Acetaldehyde dehydrogen 97.8 2.2E-05 7.6E-10 72.4 5.1 141 86-261 4-153 (312)
46 1f06_A MESO-diaminopimelate D- 97.6 7.5E-05 2.6E-09 68.4 6.6 89 86-210 3-91 (320)
47 3bio_A Oxidoreductase, GFO/IDH 97.2 0.00033 1.1E-08 63.7 5.6 89 86-209 9-97 (304)
48 3ohs_X Trans-1,2-dihydrobenzen 97.2 0.00035 1.2E-08 63.4 5.4 98 85-209 1-98 (334)
49 2ejw_A HDH, homoserine dehydro 97.0 0.0019 6.7E-08 60.1 8.9 87 86-207 3-96 (332)
50 4hkt_A Inositol 2-dehydrogenas 97.0 0.00084 2.9E-08 60.7 5.8 94 85-209 2-95 (331)
51 3ezy_A Dehydrogenase; structur 97.0 0.00064 2.2E-08 61.9 4.8 96 85-209 1-96 (344)
52 3mz0_A Inositol 2-dehydrogenas 96.9 0.0011 3.8E-08 60.4 6.1 98 85-209 1-98 (344)
53 3i23_A Oxidoreductase, GFO/IDH 96.9 0.0012 4.1E-08 60.5 6.3 96 85-209 1-97 (349)
54 3ijp_A DHPR, dihydrodipicolina 96.9 0.0002 6.8E-09 65.8 0.9 96 85-204 20-116 (288)
55 3qy9_A DHPR, dihydrodipicolina 96.9 0.00085 2.9E-08 60.0 4.9 33 86-121 3-35 (243)
56 3kux_A Putative oxidoreductase 96.8 0.0023 7.9E-08 58.5 7.6 92 86-209 7-99 (352)
57 3ing_A Homoserine dehydrogenas 96.8 0.0024 8.1E-08 59.3 7.4 37 85-121 3-43 (325)
58 3euw_A MYO-inositol dehydrogen 96.8 0.0023 7.9E-08 58.1 6.9 94 86-209 4-97 (344)
59 3gdo_A Uncharacterized oxidore 96.8 0.0023 7.9E-08 58.8 6.9 93 85-209 4-97 (358)
60 3ec7_A Putative dehydrogenase; 96.7 0.002 6.9E-08 59.3 6.4 98 85-209 22-119 (357)
61 2dc1_A L-aspartate dehydrogena 96.7 0.002 6.7E-08 55.9 6.0 75 87-201 1-75 (236)
62 1p9l_A Dihydrodipicolinate red 96.7 0.0022 7.5E-08 57.3 6.4 33 87-121 1-34 (245)
63 3evn_A Oxidoreductase, GFO/IDH 96.7 0.0025 8.5E-08 57.8 6.8 96 85-209 4-99 (329)
64 3e18_A Oxidoreductase; dehydro 96.7 0.0016 5.3E-08 60.1 5.4 93 86-209 5-97 (359)
65 3f4l_A Putative oxidoreductase 96.7 0.0035 1.2E-07 57.2 7.5 96 85-209 1-97 (345)
66 3fhl_A Putative oxidoreductase 96.7 0.0033 1.1E-07 57.8 7.4 93 85-209 4-97 (362)
67 3ic5_A Putative saccharopine d 96.7 0.0018 6.2E-08 48.5 4.5 98 85-208 4-101 (118)
68 3cea_A MYO-inositol 2-dehydrog 96.6 0.0019 6.5E-08 58.4 5.4 96 85-209 7-103 (346)
69 2ho3_A Oxidoreductase, GFO/IDH 96.6 0.0028 9.4E-08 57.2 6.3 94 86-209 1-94 (325)
70 3e9m_A Oxidoreductase, GFO/IDH 96.6 0.0016 5.5E-08 59.1 4.7 96 85-209 4-99 (330)
71 1j5p_A Aspartate dehydrogenase 96.6 0.0018 6E-08 58.6 4.7 80 86-207 12-91 (253)
72 3e82_A Putative oxidoreductase 96.6 0.0032 1.1E-07 58.1 6.5 93 85-209 6-99 (364)
73 3db2_A Putative NADPH-dependen 96.6 0.0032 1.1E-07 57.5 6.5 95 85-209 4-98 (354)
74 3mtj_A Homoserine dehydrogenas 96.6 0.0027 9.3E-08 61.5 6.2 92 86-208 10-109 (444)
75 3c8m_A Homoserine dehydrogenas 96.6 0.0014 4.9E-08 60.6 4.1 36 86-121 6-46 (331)
76 3c1a_A Putative oxidoreductase 96.5 0.0022 7.5E-08 57.7 4.9 93 85-209 9-101 (315)
77 1ydw_A AX110P-like protein; st 96.5 0.0027 9.1E-08 58.2 5.5 99 85-209 5-103 (362)
78 4f3y_A DHPR, dihydrodipicolina 96.5 0.0028 9.5E-08 57.5 5.5 34 86-121 7-41 (272)
79 3do5_A HOM, homoserine dehydro 96.5 0.0042 1.4E-07 57.6 6.6 36 86-121 2-43 (327)
80 4had_A Probable oxidoreductase 96.4 0.003 1E-07 57.3 5.2 96 85-209 22-118 (350)
81 1tlt_A Putative oxidoreductase 96.4 0.0035 1.2E-07 56.3 5.4 92 86-209 5-97 (319)
82 3q2i_A Dehydrogenase; rossmann 96.3 0.0029 1E-07 57.8 4.6 96 85-209 12-107 (354)
83 2dt5_A AT-rich DNA-binding pro 96.3 0.0094 3.2E-07 52.1 7.5 94 87-210 81-174 (211)
84 3rc1_A Sugar 3-ketoreductase; 96.3 0.0032 1.1E-07 57.8 4.8 94 86-209 27-121 (350)
85 4gqa_A NAD binding oxidoreduct 96.3 0.0026 8.7E-08 59.4 3.8 98 85-209 25-128 (412)
86 1xea_A Oxidoreductase, GFO/IDH 96.1 0.0067 2.3E-07 54.6 5.8 94 85-209 1-95 (323)
87 1h6d_A Precursor form of gluco 96.1 0.0087 3E-07 56.8 6.7 100 85-209 82-182 (433)
88 3upl_A Oxidoreductase; rossman 96.1 0.0054 1.8E-07 59.6 5.1 107 85-201 22-133 (446)
89 4fb5_A Probable oxidoreductase 96.1 0.01 3.5E-07 53.8 6.6 98 85-209 24-126 (393)
90 1dih_A Dihydrodipicolinate red 95.9 0.0034 1.2E-07 56.6 2.9 96 86-206 5-101 (273)
91 2ixa_A Alpha-N-acetylgalactosa 95.9 0.012 4E-07 55.8 6.6 102 85-209 19-123 (444)
92 3m2t_A Probable dehydrogenase; 95.9 0.0079 2.7E-07 55.3 5.1 95 86-209 5-100 (359)
93 3moi_A Probable dehydrogenase; 95.8 0.004 1.4E-07 57.8 3.1 95 85-209 1-96 (387)
94 3uuw_A Putative oxidoreductase 95.8 0.0096 3.3E-07 53.2 5.3 92 86-209 6-98 (308)
95 1zh8_A Oxidoreductase; TM0312, 95.7 0.0093 3.2E-07 54.4 5.0 97 85-209 17-114 (340)
96 4ew6_A D-galactose-1-dehydroge 95.6 0.0068 2.3E-07 55.3 3.5 87 86-209 25-113 (330)
97 3keo_A Redox-sensing transcrip 95.5 0.018 6.1E-07 50.7 5.8 98 86-210 84-182 (212)
98 1lc0_A Biliverdin reductase A; 95.4 0.032 1.1E-06 50.0 7.2 91 85-209 6-97 (294)
99 4h3v_A Oxidoreductase domain p 95.4 0.0059 2E-07 55.3 2.3 97 86-209 6-107 (390)
100 2glx_A 1,5-anhydro-D-fructose 95.3 0.024 8.3E-07 50.8 5.9 93 87-209 1-94 (332)
101 3o9z_A Lipopolysaccaride biosy 94.8 0.061 2.1E-06 48.6 7.4 94 86-209 3-104 (312)
102 3ip3_A Oxidoreductase, putativ 94.7 0.0097 3.3E-07 54.0 1.7 96 85-209 1-99 (337)
103 3oa2_A WBPB; oxidoreductase, s 94.7 0.067 2.3E-06 48.5 7.3 94 86-209 3-105 (318)
104 2vt3_A REX, redox-sensing tran 94.6 0.063 2.2E-06 46.9 6.6 94 87-210 86-179 (215)
105 2p2s_A Putative oxidoreductase 94.5 0.064 2.2E-06 48.4 6.7 94 86-209 4-98 (336)
106 3u3x_A Oxidoreductase; structu 93.9 0.044 1.5E-06 50.4 4.3 94 86-209 26-120 (361)
107 3v5n_A Oxidoreductase; structu 93.8 0.066 2.2E-06 50.3 5.3 98 85-209 36-142 (417)
108 1ebf_A Homoserine dehydrogenas 93.6 0.07 2.4E-06 49.9 5.1 37 85-121 3-40 (358)
109 2nvw_A Galactose/lactose metab 93.5 0.044 1.5E-06 52.9 3.7 99 86-209 39-146 (479)
110 3ius_A Uncharacterized conserv 93.4 0.16 5.5E-06 43.7 6.7 33 85-120 4-36 (286)
111 3btv_A Galactose/lactose metab 93.3 0.027 9.2E-07 53.4 1.7 99 86-209 20-127 (438)
112 3dqp_A Oxidoreductase YLBE; al 93.0 0.21 7.4E-06 41.4 6.8 31 87-120 1-32 (219)
113 3fwz_A Inner membrane protein 92.8 0.13 4.3E-06 40.7 4.7 33 85-120 6-38 (140)
114 1y81_A Conserved hypothetical 92.6 0.62 2.1E-05 37.4 8.8 85 85-208 13-101 (138)
115 3abi_A Putative uncharacterize 92.4 0.032 1.1E-06 51.4 0.8 89 86-203 16-104 (365)
116 3dty_A Oxidoreductase, GFO/IDH 92.3 0.082 2.8E-06 49.1 3.5 102 85-209 11-117 (398)
117 3oqb_A Oxidoreductase; structu 92.3 0.083 2.8E-06 48.5 3.5 33 176-209 83-115 (383)
118 1r0k_A 1-deoxy-D-xylulose 5-ph 92.2 0.1 3.4E-06 49.8 4.0 32 86-118 4-36 (388)
119 3ff4_A Uncharacterized protein 92.1 0.49 1.7E-05 37.7 7.4 83 86-208 4-90 (122)
120 4gmf_A Yersiniabactin biosynth 92.0 0.31 1.1E-05 45.6 7.1 140 85-258 6-177 (372)
121 3e48_A Putative nucleoside-dip 91.8 0.1 3.6E-06 45.0 3.4 31 87-119 1-32 (289)
122 2nu8_A Succinyl-COA ligase [AD 91.8 0.33 1.1E-05 43.7 6.8 87 86-206 7-94 (288)
123 3evt_A Phosphoglycerate dehydr 91.1 0.28 9.4E-06 45.3 5.6 33 86-121 137-169 (324)
124 4g2n_A D-isomer specific 2-hyd 90.9 0.22 7.4E-06 46.5 4.8 31 87-120 174-204 (345)
125 2pi1_A D-lactate dehydrogenase 90.9 0.21 7.3E-06 46.1 4.7 32 86-120 141-172 (334)
126 3m2p_A UDP-N-acetylglucosamine 90.7 0.61 2.1E-05 40.7 7.3 33 85-120 1-34 (311)
127 3llv_A Exopolyphosphatase-rela 90.4 0.28 9.7E-06 38.1 4.4 31 87-120 7-37 (141)
128 3kb6_A D-lactate dehydrogenase 90.4 0.25 8.6E-06 45.6 4.7 31 86-119 141-171 (334)
129 3pp8_A Glyoxylate/hydroxypyruv 90.4 0.23 7.9E-06 45.6 4.4 33 86-121 139-171 (315)
130 2duw_A Putative COA-binding pr 90.4 0.98 3.4E-05 36.4 7.7 84 87-207 14-101 (145)
131 2bma_A Glutamate dehydrogenase 90.3 0.9 3.1E-05 44.4 8.7 100 87-203 253-363 (470)
132 3hg7_A D-isomer specific 2-hyd 90.3 0.27 9.2E-06 45.4 4.7 33 86-121 140-172 (324)
133 1xdw_A NAD+-dependent (R)-2-hy 90.2 0.27 9.1E-06 45.2 4.7 32 86-120 146-177 (331)
134 1qp8_A Formate dehydrogenase; 90.2 0.27 9.2E-06 44.7 4.7 32 86-120 124-155 (303)
135 2yq5_A D-isomer specific 2-hyd 90.1 0.27 9.3E-06 45.7 4.7 33 86-121 148-180 (343)
136 1dxy_A D-2-hydroxyisocaproate 90.1 0.28 9.4E-06 45.2 4.7 32 86-120 145-176 (333)
137 1iuk_A Hypothetical protein TT 90.1 1.1 3.9E-05 35.9 7.8 86 87-209 14-103 (140)
138 3gg9_A D-3-phosphoglycerate de 90.0 0.28 9.7E-06 45.7 4.7 32 86-120 160-191 (352)
139 2g76_A 3-PGDH, D-3-phosphoglyc 89.8 0.31 1.1E-05 45.1 4.8 32 86-120 165-196 (335)
140 1gdh_A D-glycerate dehydrogena 89.5 0.34 1.2E-05 44.2 4.8 32 86-120 146-177 (320)
141 4e5n_A Thermostable phosphite 89.4 0.26 9E-06 45.4 3.9 32 86-120 145-176 (330)
142 1gtm_A Glutamate dehydrogenase 89.3 0.36 1.2E-05 46.2 5.0 32 87-121 213-245 (419)
143 3jtm_A Formate dehydrogenase, 89.3 0.31 1.1E-05 45.5 4.4 32 86-120 164-195 (351)
144 1lss_A TRK system potassium up 89.3 0.48 1.7E-05 36.0 4.9 31 87-120 5-35 (140)
145 1mx3_A CTBP1, C-terminal bindi 89.3 0.36 1.2E-05 44.9 4.8 32 86-120 168-199 (347)
146 1qyd_A Pinoresinol-lariciresin 89.1 0.41 1.4E-05 41.6 4.8 31 87-120 5-36 (313)
147 2d59_A Hypothetical protein PH 89.1 1.3 4.6E-05 35.5 7.6 82 87-207 23-108 (144)
148 1wwk_A Phosphoglycerate dehydr 89.1 0.38 1.3E-05 43.7 4.7 32 86-120 142-173 (307)
149 3gvx_A Glycerate dehydrogenase 89.1 0.3 1E-05 44.4 4.0 31 87-120 123-153 (290)
150 4hy3_A Phosphoglycerate oxidor 89.1 0.33 1.1E-05 45.6 4.4 32 86-120 176-207 (365)
151 2cuk_A Glycerate dehydrogenase 89.1 0.38 1.3E-05 43.8 4.7 33 86-121 144-176 (311)
152 4dgs_A Dehydrogenase; structur 89.1 0.38 1.3E-05 44.7 4.8 32 86-120 171-202 (340)
153 1j4a_A D-LDH, D-lactate dehydr 88.8 0.4 1.4E-05 44.1 4.7 33 86-121 146-178 (333)
154 2ekl_A D-3-phosphoglycerate de 88.6 0.43 1.5E-05 43.4 4.7 32 86-120 142-173 (313)
155 3oet_A Erythronate-4-phosphate 88.5 0.42 1.4E-05 45.3 4.7 30 87-119 120-149 (381)
156 2r6j_A Eugenol synthase 1; phe 88.5 0.3 1E-05 42.8 3.5 32 85-119 10-42 (318)
157 1id1_A Putative potassium chan 88.5 0.51 1.7E-05 37.4 4.6 31 87-120 4-34 (153)
158 1sc6_A PGDH, D-3-phosphoglycer 88.3 0.43 1.5E-05 45.3 4.7 31 87-120 146-176 (404)
159 2w2k_A D-mandelate dehydrogena 88.3 0.47 1.6E-05 43.9 4.8 31 87-120 164-195 (348)
160 2o4c_A Erythronate-4-phosphate 88.2 0.45 1.5E-05 45.0 4.7 31 86-119 116-146 (380)
161 3l4b_C TRKA K+ channel protien 87.5 0.43 1.5E-05 40.1 3.8 31 87-120 1-31 (218)
162 2g1u_A Hypothetical protein TM 87.4 0.76 2.6E-05 36.5 5.0 32 86-120 19-50 (155)
163 3ba1_A HPPR, hydroxyphenylpyru 87.3 0.5 1.7E-05 43.6 4.4 32 86-120 164-195 (333)
164 2nac_A NAD-dependent formate d 87.2 0.49 1.7E-05 44.9 4.4 31 87-120 192-222 (393)
165 2d0i_A Dehydrogenase; structur 86.8 0.56 1.9E-05 43.1 4.4 32 86-120 146-177 (333)
166 2dbq_A Glyoxylate reductase; D 86.8 0.63 2.2E-05 42.6 4.7 32 86-120 150-181 (334)
167 2gcg_A Glyoxylate reductase/hy 86.8 0.53 1.8E-05 43.0 4.2 32 86-120 155-186 (330)
168 2j6i_A Formate dehydrogenase; 86.5 0.55 1.9E-05 43.8 4.2 32 86-120 164-196 (364)
169 3k5p_A D-3-phosphoglycerate de 86.2 0.67 2.3E-05 44.4 4.7 31 87-120 157-187 (416)
170 4huj_A Uncharacterized protein 86.2 0.61 2.1E-05 39.6 4.0 33 86-121 23-55 (220)
171 3c85_A Putative glutathione-re 86.1 0.58 2E-05 38.0 3.7 31 87-120 40-71 (183)
172 1oi7_A Succinyl-COA synthetase 86.1 0.92 3.2E-05 40.9 5.4 86 86-206 7-94 (288)
173 3d4o_A Dipicolinate synthase s 85.6 0.81 2.8E-05 40.7 4.7 31 87-120 156-186 (293)
174 1vpd_A Tartronate semialdehyde 85.5 0.78 2.7E-05 40.1 4.5 32 85-119 4-35 (299)
175 3gt0_A Pyrroline-5-carboxylate 85.0 0.83 2.8E-05 39.3 4.4 23 86-108 2-24 (247)
176 2rir_A Dipicolinate synthase, 84.8 0.91 3.1E-05 40.4 4.7 32 86-120 157-188 (300)
177 3l9w_A Glutathione-regulated p 84.8 0.74 2.5E-05 43.6 4.2 31 87-120 5-35 (413)
178 3aog_A Glutamate dehydrogenase 84.7 1.5 5E-05 42.5 6.3 32 87-121 236-267 (440)
179 4fcc_A Glutamate dehydrogenase 84.6 0.92 3.1E-05 44.0 4.8 99 87-203 236-345 (450)
180 2ew2_A 2-dehydropantoate 2-red 84.4 1 3.5E-05 39.1 4.7 32 85-119 2-33 (316)
181 2hmt_A YUAA protein; RCK, KTN, 84.4 0.88 3E-05 34.5 3.8 30 87-119 7-36 (144)
182 1yb4_A Tartronic semialdehyde 84.1 0.72 2.5E-05 40.1 3.6 31 86-119 3-33 (295)
183 3c24_A Putative oxidoreductase 84.1 1.1 3.9E-05 39.1 4.9 32 85-119 10-42 (286)
184 3qvo_A NMRA family protein; st 84.0 0.58 2E-05 39.4 2.9 33 85-119 22-55 (236)
185 2vns_A Metalloreductase steap3 83.7 1 3.5E-05 38.1 4.3 32 85-119 27-58 (215)
186 2ahr_A Putative pyrroline carb 83.5 1.1 3.7E-05 38.5 4.5 23 86-108 3-25 (259)
187 4ezb_A Uncharacterized conserv 83.5 1.1 3.9E-05 40.3 4.8 33 85-119 23-55 (317)
188 3ggo_A Prephenate dehydrogenas 83.4 1.2 4E-05 40.4 4.8 34 85-119 32-65 (314)
189 3eag_A UDP-N-acetylmuramate:L- 83.3 4.8 0.00016 36.3 8.8 87 86-202 4-92 (326)
190 3g0o_A 3-hydroxyisobutyrate de 83.2 1.2 4.2E-05 39.5 4.7 32 85-119 6-37 (303)
191 1ygy_A PGDH, D-3-phosphoglycer 82.7 1.2 4E-05 43.5 4.8 32 86-120 142-173 (529)
192 1bgv_A Glutamate dehydrogenase 82.6 2.8 9.5E-05 40.6 7.3 99 87-203 231-341 (449)
193 3doj_A AT3G25530, dehydrogenas 82.6 1.4 4.6E-05 39.4 4.8 32 86-120 21-52 (310)
194 3r3j_A Glutamate dehydrogenase 82.4 2.1 7.1E-05 41.7 6.3 102 87-206 240-352 (456)
195 3two_A Mannitol dehydrogenase; 82.1 2.2 7.4E-05 38.4 6.0 129 87-254 178-308 (348)
196 2h78_A Hibadh, 3-hydroxyisobut 81.9 1.3 4.5E-05 38.9 4.5 31 86-119 3-33 (302)
197 3cky_A 2-hydroxymethyl glutara 81.9 1.4 4.7E-05 38.5 4.5 31 86-119 4-34 (301)
198 2g5c_A Prephenate dehydrogenas 81.7 1.5 5.2E-05 38.0 4.7 32 87-119 2-33 (281)
199 1vm6_A DHPR, dihydrodipicolina 81.6 2.8 9.6E-05 37.2 6.4 32 86-120 12-44 (228)
200 3pef_A 6-phosphogluconate dehy 81.5 1.6 5.3E-05 38.3 4.7 30 87-119 2-31 (287)
201 4dll_A 2-hydroxy-3-oxopropiona 81.3 1.4 4.9E-05 39.5 4.5 31 86-119 31-61 (320)
202 1v9l_A Glutamate dehydrogenase 81.3 2.3 7.9E-05 40.8 6.2 32 87-121 211-242 (421)
203 3d64_A Adenosylhomocysteinase; 81.1 1.4 4.9E-05 43.0 4.8 31 86-119 277-307 (494)
204 3qha_A Putative oxidoreductase 80.9 1.2 4E-05 39.6 3.8 31 86-119 15-45 (296)
205 4g65_A TRK system potassium up 80.7 1.1 3.8E-05 42.9 3.7 32 86-120 3-34 (461)
206 4g65_A TRK system potassium up 80.6 0.53 1.8E-05 45.2 1.4 93 87-206 236-331 (461)
207 3l6d_A Putative oxidoreductase 80.5 1.5 5.1E-05 39.2 4.3 32 85-119 8-39 (306)
208 2f1k_A Prephenate dehydrogenas 80.4 1.8 6.2E-05 37.4 4.7 30 87-119 1-30 (279)
209 3dtt_A NADP oxidoreductase; st 80.4 1.8 6.2E-05 37.2 4.7 32 85-119 18-49 (245)
210 4gbj_A 6-phosphogluconate dehy 80.3 1.4 4.7E-05 39.6 4.1 33 85-120 4-36 (297)
211 3n58_A Adenosylhomocysteinase; 79.9 1.7 5.7E-05 42.4 4.7 30 87-119 248-277 (464)
212 2raf_A Putative dinucleotide-b 79.7 2.1 7E-05 36.1 4.7 30 86-118 19-48 (209)
213 3h9u_A Adenosylhomocysteinase; 79.3 1.8 6.3E-05 41.8 4.7 30 87-119 212-241 (436)
214 2yv2_A Succinyl-COA synthetase 79.2 3.7 0.00013 37.0 6.6 86 86-206 13-101 (297)
215 3b1f_A Putative prephenate deh 79.0 1.9 6.4E-05 37.6 4.4 33 86-119 6-38 (290)
216 2cvz_A Dehydrogenase, 3-hydrox 78.9 1.7 5.7E-05 37.6 4.0 29 87-119 2-30 (289)
217 1v8b_A Adenosylhomocysteinase; 78.5 1.6 5.3E-05 42.6 4.0 32 86-120 257-288 (479)
218 2yv1_A Succinyl-COA ligase [AD 78.4 3.4 0.00012 37.2 6.0 85 87-206 14-100 (294)
219 4e21_A 6-phosphogluconate dehy 78.4 2.1 7.2E-05 39.7 4.7 31 87-120 23-53 (358)
220 3d1l_A Putative NADP oxidoredu 78.0 1.8 6E-05 37.3 3.8 32 87-121 11-42 (266)
221 2gf2_A Hibadh, 3-hydroxyisobut 77.9 1.9 6.5E-05 37.5 4.1 30 87-119 1-30 (296)
222 1jay_A Coenzyme F420H2:NADP+ o 77.4 2.7 9.3E-05 34.6 4.7 31 87-120 1-32 (212)
223 3pdu_A 3-hydroxyisobutyrate de 77.4 1.5 5.3E-05 38.3 3.4 30 87-119 2-31 (287)
224 1i36_A Conserved hypothetical 77.2 2.3 7.7E-05 36.5 4.3 29 87-118 1-29 (264)
225 1yqd_A Sinapyl alcohol dehydro 77.2 2.1 7.3E-05 38.9 4.4 30 87-119 189-218 (366)
226 2uyy_A N-PAC protein; long-cha 76.7 2.3 7.7E-05 37.6 4.3 30 87-119 31-60 (316)
227 3ew7_A LMO0794 protein; Q8Y8U8 76.5 3 0.0001 33.9 4.7 31 87-120 1-32 (221)
228 3h2s_A Putative NADH-flavin re 76.4 3 0.0001 34.1 4.7 31 87-120 1-32 (224)
229 3ktd_A Prephenate dehydrogenas 75.7 2.5 8.6E-05 39.0 4.4 31 86-119 8-38 (341)
230 2pv7_A T-protein [includes: ch 75.7 2.6 9.1E-05 37.3 4.5 32 85-119 20-52 (298)
231 1c1d_A L-phenylalanine dehydro 75.7 2.7 9.2E-05 39.3 4.7 31 87-121 176-206 (355)
232 2x0j_A Malate dehydrogenase; o 75.6 1.6 5.3E-05 39.8 3.0 22 87-108 1-22 (294)
233 3kkj_A Amine oxidase, flavin-c 75.6 3.3 0.00011 32.4 4.5 33 85-120 1-33 (336)
234 1z82_A Glycerol-3-phosphate de 75.5 3 0.0001 37.4 4.8 34 84-120 12-45 (335)
235 3dfu_A Uncharacterized protein 75.1 1.1 3.7E-05 39.7 1.7 32 86-120 6-37 (232)
236 3gvp_A Adenosylhomocysteinase 75.0 2.8 9.7E-05 40.4 4.7 30 87-119 221-250 (435)
237 1ks9_A KPA reductase;, 2-dehyd 74.9 3.3 0.00011 35.5 4.7 31 87-120 1-31 (291)
238 3mw9_A GDH 1, glutamate dehydr 74.8 10 0.00035 37.3 8.7 32 87-121 245-276 (501)
239 1yqg_A Pyrroline-5-carboxylate 74.8 2.7 9.1E-05 35.9 4.1 31 87-119 1-31 (263)
240 1bg6_A N-(1-D-carboxylethyl)-L 74.7 3.2 0.00011 36.9 4.7 30 87-119 5-34 (359)
241 3gg2_A Sugar dehydrogenase, UD 74.6 3 0.0001 39.8 4.7 31 86-119 2-32 (450)
242 3qsg_A NAD-binding phosphogluc 74.1 2.6 8.9E-05 37.7 4.0 31 86-119 24-55 (312)
243 3nkl_A UDP-D-quinovosamine 4-d 73.9 4.5 0.00015 31.1 4.9 34 86-121 4-37 (141)
244 1np3_A Ketol-acid reductoisome 73.7 3.1 0.0001 37.9 4.4 30 87-119 17-46 (338)
245 3oj0_A Glutr, glutamyl-tRNA re 73.0 1.7 5.8E-05 34.0 2.2 29 87-118 22-50 (144)
246 2i76_A Hypothetical protein; N 72.8 1.2 3.9E-05 39.1 1.3 22 86-107 2-23 (276)
247 3tri_A Pyrroline-5-carboxylate 72.1 3.6 0.00012 36.3 4.4 22 87-108 4-25 (280)
248 2rcy_A Pyrroline carboxylate r 71.8 2.4 8E-05 36.2 3.0 22 87-108 5-26 (262)
249 3dhn_A NAD-dependent epimerase 71.7 3.7 0.00013 33.7 4.1 31 87-120 5-36 (227)
250 2qyt_A 2-dehydropantoate 2-red 71.6 2.7 9.4E-05 36.6 3.5 36 85-120 7-45 (317)
251 1evy_A Glycerol-3-phosphate de 71.1 3.6 0.00012 37.2 4.2 29 88-119 17-45 (366)
252 4b4o_A Epimerase family protei 71.0 4.5 0.00015 34.9 4.7 30 87-119 1-31 (298)
253 2yjz_A Metalloreductase steap4 73.4 0.87 3E-05 38.6 0.0 24 85-108 18-41 (201)
254 1hdo_A Biliverdin IX beta redu 70.0 5.6 0.00019 31.7 4.8 31 87-120 4-35 (206)
255 4gwg_A 6-phosphogluconate dehy 69.6 4 0.00014 39.6 4.4 32 86-120 4-35 (484)
256 2aef_A Calcium-gated potassium 68.9 3.1 0.0001 35.1 3.1 30 86-119 9-38 (234)
257 3gpi_A NAD-dependent epimerase 68.9 4.9 0.00017 34.4 4.4 31 87-120 4-34 (286)
258 3i83_A 2-dehydropantoate 2-red 68.7 5.4 0.00018 35.6 4.8 33 85-120 1-33 (320)
259 4e12_A Diketoreductase; oxidor 68.1 5.6 0.00019 34.8 4.7 30 87-119 5-34 (283)
260 2tmg_A Protein (glutamate dehy 67.7 5.6 0.00019 38.0 5.0 33 87-121 210-242 (415)
261 3goh_A Alcohol dehydrogenase, 67.7 3.6 0.00012 36.3 3.4 85 87-206 144-228 (315)
262 3r6d_A NAD-dependent epimerase 67.6 6.1 0.00021 32.4 4.6 32 85-119 4-37 (221)
263 2pgd_A 6-phosphogluconate dehy 67.5 4.8 0.00016 38.5 4.4 31 87-120 3-33 (482)
264 3sc6_A DTDP-4-dehydrorhamnose 67.4 3.9 0.00013 34.8 3.5 33 85-120 4-37 (287)
265 1txg_A Glycerol-3-phosphate de 67.2 4.8 0.00016 35.4 4.1 31 87-120 1-31 (335)
266 3dfz_A SIRC, precorrin-2 dehyd 67.1 17 0.00059 31.5 7.6 31 87-120 32-62 (223)
267 1leh_A Leucine dehydrogenase; 67.0 5.6 0.00019 37.2 4.7 31 87-121 174-204 (364)
268 3c1o_A Eugenol synthase; pheny 67.0 4.8 0.00016 34.9 4.0 32 85-119 3-35 (321)
269 2yfq_A Padgh, NAD-GDH, NAD-spe 66.8 4.5 0.00015 38.7 4.1 33 87-122 213-245 (421)
270 3obb_A Probable 3-hydroxyisobu 66.6 5.5 0.00019 35.8 4.5 31 87-120 4-34 (300)
271 3ce6_A Adenosylhomocysteinase; 66.3 5.6 0.00019 38.7 4.7 30 87-119 275-304 (494)
272 1uuf_A YAHK, zinc-type alcohol 66.0 4.3 0.00015 37.1 3.6 30 87-119 196-225 (369)
273 2p4q_A 6-phosphogluconate dehy 65.8 5.2 0.00018 38.7 4.4 34 84-120 8-41 (497)
274 1pgj_A 6PGDH, 6-PGDH, 6-phosph 65.7 5.3 0.00018 38.3 4.4 31 87-120 2-32 (478)
275 3vps_A TUNA, NAD-dependent epi 65.7 6.4 0.00022 33.7 4.5 33 85-120 6-39 (321)
276 2iz1_A 6-phosphogluconate dehy 65.4 5.1 0.00017 38.2 4.2 31 87-120 6-36 (474)
277 2dq4_A L-threonine 3-dehydroge 65.1 6.2 0.00021 35.2 4.5 30 87-119 166-196 (343)
278 2izz_A Pyrroline-5-carboxylate 64.9 4 0.00014 36.6 3.2 35 86-120 22-57 (322)
279 2vhw_A Alanine dehydrogenase; 64.9 6.6 0.00022 36.3 4.7 31 86-119 168-198 (377)
280 2q3e_A UDP-glucose 6-dehydroge 64.7 4.9 0.00017 38.1 3.9 32 87-119 6-37 (467)
281 3c7a_A Octopine dehydrogenase; 64.6 6.3 0.00022 36.1 4.5 32 86-119 2-33 (404)
282 1f0y_A HCDH, L-3-hydroxyacyl-C 64.5 7.9 0.00027 34.0 5.0 31 86-119 15-45 (302)
283 4ej6_A Putative zinc-binding d 64.4 6.1 0.00021 35.9 4.3 30 87-119 184-214 (370)
284 3e8x_A Putative NAD-dependent 64.3 7.8 0.00027 32.1 4.7 32 86-120 21-53 (236)
285 2zyd_A 6-phosphogluconate dehy 64.2 6 0.0002 38.0 4.4 32 86-120 15-46 (480)
286 3hn2_A 2-dehydropantoate 2-red 64.2 5.7 0.0002 35.2 4.0 33 85-120 1-33 (312)
287 2d5c_A AROE, shikimate 5-dehyd 64.1 6.6 0.00023 33.9 4.4 30 88-120 118-147 (263)
288 2ydy_A Methionine adenosyltran 63.9 7.7 0.00026 33.4 4.7 31 86-119 2-33 (315)
289 1mv8_A GMD, GDP-mannose 6-dehy 63.9 6.3 0.00022 36.9 4.5 30 87-119 1-30 (436)
290 3a06_A 1-deoxy-D-xylulose 5-ph 63.4 7.3 0.00025 37.0 4.7 41 87-129 4-45 (376)
291 3ego_A Probable 2-dehydropanto 63.3 4.6 0.00016 36.0 3.2 32 85-120 1-32 (307)
292 2cf5_A Atccad5, CAD, cinnamyl 62.8 3.6 0.00012 37.2 2.4 31 87-120 182-212 (357)
293 2a35_A Hypothetical protein PA 62.6 5.7 0.0002 32.0 3.5 33 85-118 4-37 (215)
294 3fpc_A NADP-dependent alcohol 62.5 19 0.00065 32.1 7.2 30 87-119 168-198 (352)
295 1lld_A L-lactate dehydrogenase 62.3 8.4 0.00029 33.9 4.7 31 85-118 6-38 (319)
296 3g17_A Similar to 2-dehydropan 62.1 4.7 0.00016 35.5 3.0 24 85-108 1-24 (294)
297 1gpj_A Glutamyl-tRNA reductase 62.0 6.5 0.00022 36.7 4.1 31 87-120 168-199 (404)
298 4hv4_A UDP-N-acetylmuramate--L 61.7 17 0.0006 34.6 7.2 83 87-201 23-106 (494)
299 2fp4_A Succinyl-COA ligase [GD 61.6 7.8 0.00027 35.1 4.5 88 87-209 14-104 (305)
300 3k92_A NAD-GDH, NAD-specific g 61.6 6.9 0.00024 37.6 4.3 33 86-121 221-253 (424)
301 4egb_A DTDP-glucose 4,6-dehydr 60.8 7.8 0.00027 33.9 4.2 35 86-121 24-59 (346)
302 3ip1_A Alcohol dehydrogenase, 60.8 16 0.00054 33.5 6.5 30 87-119 215-245 (404)
303 3ruf_A WBGU; rossmann fold, UD 60.4 9.6 0.00033 33.4 4.8 32 86-120 25-57 (351)
304 3p2y_A Alanine dehydrogenase/p 60.3 7.5 0.00026 36.7 4.2 32 85-119 183-214 (381)
305 2x4g_A Nucleoside-diphosphate- 60.2 10 0.00035 32.9 4.8 31 87-120 14-45 (342)
306 3slg_A PBGP3 protein; structur 60.0 7.9 0.00027 34.3 4.2 33 86-120 24-57 (372)
307 2o3j_A UDP-glucose 6-dehydroge 60.0 7.2 0.00024 37.3 4.1 34 85-119 8-41 (481)
308 1qyc_A Phenylcoumaran benzylic 60.0 8.3 0.00028 33.0 4.2 30 87-119 5-35 (308)
309 1xq6_A Unknown protein; struct 59.9 11 0.00039 30.8 4.9 33 86-119 4-37 (253)
310 1zcj_A Peroxisomal bifunctiona 59.8 17 0.00058 34.5 6.7 31 86-119 37-67 (463)
311 4gx0_A TRKA domain protein; me 59.7 8.1 0.00028 37.1 4.5 31 87-120 349-379 (565)
312 1x13_A NAD(P) transhydrogenase 59.6 9.2 0.00032 35.8 4.7 31 86-119 172-202 (401)
313 2ph5_A Homospermidine synthase 59.5 4.5 0.00015 39.5 2.6 92 86-206 13-111 (480)
314 2csu_A 457AA long hypothetical 59.3 28 0.00096 33.1 8.1 83 86-206 8-94 (457)
315 4gx0_A TRKA domain protein; me 59.2 13 0.00043 35.8 5.7 33 85-120 126-158 (565)
316 1ek6_A UDP-galactose 4-epimera 59.0 9.8 0.00033 33.2 4.5 32 85-119 1-33 (348)
317 3ldh_A Lactate dehydrogenase; 59.0 14 0.00049 34.0 5.8 23 86-108 21-43 (330)
318 2gas_A Isoflavone reductase; N 58.6 6.9 0.00024 33.5 3.4 29 87-118 3-32 (307)
319 3aoe_E Glutamate dehydrogenase 58.2 9.5 0.00033 36.5 4.6 32 87-121 219-250 (419)
320 3q2o_A Phosphoribosylaminoimid 57.8 11 0.00036 34.4 4.7 31 87-120 15-45 (389)
321 3ghy_A Ketopantoate reductase 57.7 10 0.00035 33.9 4.5 30 87-119 4-33 (335)
322 2y1e_A 1-deoxy-D-xylulose 5-ph 57.4 11 0.00039 35.9 4.9 44 86-130 21-66 (398)
323 1l7d_A Nicotinamide nucleotide 57.4 11 0.00037 34.8 4.7 32 85-119 171-202 (384)
324 2d8a_A PH0655, probable L-thre 57.3 8.4 0.00029 34.5 3.9 30 87-119 169-199 (348)
325 1yj8_A Glycerol-3-phosphate de 57.1 6.6 0.00023 35.7 3.2 24 85-108 20-43 (375)
326 4ina_A Saccharopine dehydrogen 56.9 12 0.0004 34.9 4.9 97 87-204 2-104 (405)
327 3jv7_A ADH-A; dehydrogenase, n 56.7 7.4 0.00025 34.7 3.4 130 87-254 173-310 (345)
328 1zej_A HBD-9, 3-hydroxyacyl-CO 56.4 12 0.00041 33.7 4.7 74 87-189 13-86 (293)
329 4b8w_A GDP-L-fucose synthase; 56.4 8.2 0.00028 32.6 3.5 24 85-108 5-29 (319)
330 1q0q_A 1-deoxy-D-xylulose 5-ph 56.2 10 0.00036 36.3 4.4 43 86-129 9-52 (406)
331 4dio_A NAD(P) transhydrogenase 56.1 12 0.0004 35.7 4.8 31 85-118 189-219 (405)
332 3i6i_A Putative leucoanthocyan 55.9 11 0.00038 33.2 4.4 31 87-120 11-42 (346)
333 2c20_A UDP-glucose 4-epimerase 55.7 13 0.00043 32.2 4.7 31 87-120 2-33 (330)
334 3hyw_A Sulfide-quinone reducta 55.2 30 0.001 31.8 7.3 36 85-121 1-36 (430)
335 2dpo_A L-gulonate 3-dehydrogen 54.9 12 0.00042 33.9 4.6 31 86-119 6-36 (319)
336 2eez_A Alanine dehydrogenase; 54.8 13 0.00043 34.1 4.7 31 86-119 166-196 (369)
337 1orr_A CDP-tyvelose-2-epimeras 54.4 14 0.00047 32.0 4.7 30 87-119 2-32 (347)
338 2yy7_A L-threonine dehydrogena 54.3 8.4 0.00029 33.0 3.2 33 86-119 2-35 (312)
339 2hk9_A Shikimate dehydrogenase 54.3 11 0.00037 33.0 4.0 31 87-120 130-160 (275)
340 3uog_A Alcohol dehydrogenase; 54.0 17 0.00057 32.8 5.4 132 87-254 191-328 (363)
341 2z2v_A Hypothetical protein PH 53.7 12 0.0004 34.6 4.3 87 87-202 17-103 (365)
342 1xa0_A Putative NADPH dependen 52.7 21 0.00071 31.4 5.7 30 88-120 152-182 (328)
343 1t2a_A GDP-mannose 4,6 dehydra 52.5 15 0.00051 32.6 4.7 33 85-120 23-56 (375)
344 3ko8_A NAD-dependent epimerase 52.4 16 0.00054 31.3 4.7 31 87-120 1-32 (312)
345 1x0v_A GPD-C, GPDH-C, glycerol 52.3 9.8 0.00034 33.9 3.5 23 86-108 8-30 (354)
346 2b69_A UDP-glucuronate decarbo 52.1 15 0.00053 32.0 4.7 32 86-120 27-59 (343)
347 1dlj_A UDP-glucose dehydrogena 52.1 13 0.00044 34.6 4.3 29 87-119 1-29 (402)
348 3ay3_A NAD-dependent epimerase 51.8 6.9 0.00024 33.1 2.3 31 86-119 2-33 (267)
349 1piw_A Hypothetical zinc-type 51.6 8.2 0.00028 34.8 2.8 30 87-119 181-210 (360)
350 1e6u_A GDP-fucose synthetase; 51.5 14 0.00047 31.8 4.2 30 87-119 4-34 (321)
351 3pid_A UDP-glucose 6-dehydroge 51.2 15 0.00052 35.1 4.7 30 86-119 36-65 (432)
352 1hyh_A L-hicdh, L-2-hydroxyiso 51.0 13 0.00045 33.0 4.0 32 87-119 2-33 (309)
353 1rpn_A GDP-mannose 4,6-dehydra 50.8 17 0.00059 31.4 4.7 33 85-120 13-46 (335)
354 2c5a_A GDP-mannose-3', 5'-epim 50.6 17 0.00057 32.6 4.8 32 86-120 29-61 (379)
355 1y8q_B Anthracycline-, ubiquit 50.5 12 0.00042 37.7 4.2 107 87-201 18-134 (640)
356 2y0c_A BCEC, UDP-glucose dehyd 50.4 16 0.00054 35.0 4.7 31 86-119 8-38 (478)
357 4hb9_A Similarities with proba 50.3 18 0.00063 31.8 4.9 31 87-120 2-32 (412)
358 1sb8_A WBPP; epimerase, 4-epim 50.3 18 0.0006 31.8 4.8 31 87-120 28-59 (352)
359 1p0f_A NADP-dependent alcohol 50.0 16 0.00056 32.8 4.6 30 87-119 193-223 (373)
360 2q1w_A Putative nucleotide sug 49.8 18 0.00062 31.6 4.7 31 86-119 21-52 (333)
361 3hwr_A 2-dehydropantoate 2-red 49.7 18 0.0006 32.2 4.7 32 85-119 18-49 (318)
362 2wm3_A NMRA-like family domain 49.6 15 0.00051 31.5 4.1 31 87-119 6-37 (299)
363 3lk7_A UDP-N-acetylmuramoylala 49.6 53 0.0018 30.7 8.2 85 87-202 10-98 (451)
364 2rh8_A Anthocyanidin reductase 49.5 18 0.00062 31.3 4.7 30 85-117 8-38 (338)
365 1vl0_A DTDP-4-dehydrorhamnose 49.3 17 0.00057 30.9 4.3 31 86-119 12-43 (292)
366 1n7h_A GDP-D-mannose-4,6-dehyd 49.3 18 0.00061 32.1 4.7 33 85-120 27-60 (381)
367 4dvj_A Putative zinc-dependent 49.2 6 0.0002 35.9 1.5 92 86-201 172-264 (363)
368 4id9_A Short-chain dehydrogena 49.2 16 0.00055 31.8 4.3 32 85-119 18-50 (347)
369 2bll_A Protein YFBG; decarboxy 49.0 20 0.00067 31.0 4.8 32 87-120 1-33 (345)
370 1ur5_A Malate dehydrogenase; o 48.7 12 0.0004 33.6 3.4 33 86-121 2-34 (309)
371 3h8v_A Ubiquitin-like modifier 48.7 5.3 0.00018 36.3 1.1 22 87-108 37-58 (292)
372 3oh8_A Nucleoside-diphosphate 48.6 18 0.00061 34.3 4.8 32 86-120 147-179 (516)
373 2axq_A Saccharopine dehydrogen 47.9 17 0.00058 34.8 4.5 33 86-120 23-55 (467)
374 3st7_A Capsular polysaccharide 47.2 15 0.0005 32.7 3.8 43 87-131 1-44 (369)
375 3orq_A N5-carboxyaminoimidazol 47.1 19 0.00066 32.7 4.6 31 86-119 12-42 (377)
376 3k96_A Glycerol-3-phosphate de 46.9 19 0.00066 33.0 4.6 23 86-108 29-51 (356)
377 1lnq_A MTHK channels, potassiu 46.7 12 0.0004 33.3 3.1 29 87-119 116-144 (336)
378 1pjq_A CYSG, siroheme synthase 46.7 43 0.0015 31.7 7.1 31 87-120 13-43 (457)
379 2i99_A MU-crystallin homolog; 46.4 13 0.00044 33.3 3.2 23 86-108 135-157 (312)
380 2b5w_A Glucose dehydrogenase; 46.2 18 0.00061 32.4 4.2 31 87-120 174-207 (357)
381 3don_A Shikimate dehydrogenase 46.0 73 0.0025 28.2 8.2 108 87-202 118-228 (277)
382 3d7l_A LIN1944 protein; APC893 45.8 23 0.00079 28.3 4.4 29 87-119 4-33 (202)
383 1r6d_A TDP-glucose-4,6-dehydra 45.8 26 0.00088 30.4 5.1 34 87-120 1-38 (337)
384 2wtb_A MFP2, fatty acid multif 45.2 42 0.0014 33.9 7.1 31 86-119 312-342 (725)
385 3gqv_A Enoyl reductase; medium 45.0 24 0.00082 31.9 4.9 30 87-119 166-196 (371)
386 3uko_A Alcohol dehydrogenase c 44.9 15 0.00052 33.2 3.5 30 87-119 195-225 (378)
387 1i24_A Sulfolipid biosynthesis 44.6 23 0.0008 31.4 4.7 32 85-119 10-42 (404)
388 2p5y_A UDP-glucose 4-epimerase 44.5 25 0.00085 30.1 4.7 29 88-119 2-31 (311)
389 1smk_A Malate dehydrogenase, g 44.4 14 0.00048 33.4 3.2 24 85-108 7-31 (326)
390 1yvv_A Amine oxidase, flavin-c 44.2 23 0.0008 30.4 4.5 32 86-120 2-33 (336)
391 3krt_A Crotonyl COA reductase; 44.0 18 0.0006 33.8 3.9 30 87-119 230-260 (456)
392 1a5z_A L-lactate dehydrogenase 43.7 20 0.00067 32.2 4.0 22 87-108 1-22 (319)
393 1n2s_A DTDP-4-, DTDP-glucose o 43.3 20 0.00067 30.4 3.8 29 87-119 1-30 (299)
394 2q1s_A Putative nucleotide sug 43.0 24 0.00084 31.4 4.6 32 87-120 33-65 (377)
395 2pk3_A GDP-6-deoxy-D-LYXO-4-he 43.0 27 0.00091 29.9 4.7 32 86-120 12-44 (321)
396 3g79_A NDP-N-acetyl-D-galactos 43.0 23 0.00077 34.2 4.6 32 86-119 18-50 (478)
397 3au8_A 1-deoxy-D-xylulose 5-ph 42.9 17 0.0006 35.5 3.7 44 86-129 77-123 (488)
398 3ehe_A UDP-glucose 4-epimerase 42.7 21 0.0007 30.7 3.9 30 87-120 2-32 (313)
399 1y7t_A Malate dehydrogenase; N 42.5 24 0.00081 31.5 4.4 24 85-108 3-27 (327)
400 3h5n_A MCCB protein; ubiquitin 42.4 20 0.0007 32.9 4.0 23 86-108 118-140 (353)
401 3enk_A UDP-glucose 4-epimerase 42.2 28 0.00095 30.1 4.7 31 86-119 5-36 (341)
402 3mwd_B ATP-citrate synthase; A 42.0 62 0.0021 29.8 7.2 33 87-121 11-46 (334)
403 1y1p_A ARII, aldehyde reductas 41.9 27 0.00093 29.9 4.6 31 87-120 12-43 (342)
404 1rkx_A CDP-glucose-4,6-dehydra 41.8 27 0.00092 30.6 4.6 31 87-120 10-41 (357)
405 3ihm_A Styrene monooxygenase A 41.8 22 0.00076 32.7 4.2 34 84-120 20-53 (430)
406 3ond_A Adenosylhomocysteinase; 41.7 26 0.00087 34.2 4.7 31 87-121 266-296 (488)
407 1oc2_A DTDP-glucose 4,6-dehydr 41.7 22 0.00074 30.9 3.9 33 87-120 5-38 (348)
408 2hun_A 336AA long hypothetical 41.6 25 0.00084 30.4 4.2 33 87-120 4-37 (336)
409 1db3_A GDP-mannose 4,6-dehydra 41.6 28 0.00096 30.5 4.7 30 87-119 2-32 (372)
410 1ryi_A Glycine oxidase; flavop 41.5 34 0.0012 30.0 5.2 33 85-120 16-48 (382)
411 2dkn_A 3-alpha-hydroxysteroid 41.3 31 0.0011 28.3 4.7 29 88-119 3-32 (255)
412 1udb_A Epimerase, UDP-galactos 41.2 29 0.001 30.0 4.7 29 88-119 2-31 (338)
413 4a2c_A Galactitol-1-phosphate 41.0 28 0.00096 30.7 4.6 22 87-108 162-183 (346)
414 1xgk_A Nitrogen metabolite rep 41.0 26 0.00088 31.4 4.4 31 86-119 5-36 (352)
415 1eq2_A ADP-L-glycero-D-mannohe 40.8 28 0.00095 29.5 4.4 31 88-120 1-32 (310)
416 2pzm_A Putative nucleotide sug 40.4 27 0.00094 30.4 4.4 32 86-120 20-52 (330)
417 3sxp_A ADP-L-glycero-D-mannohe 40.4 29 0.00098 30.6 4.6 34 86-120 10-44 (362)
418 2x6t_A ADP-L-glycero-D-manno-h 40.3 28 0.00097 30.5 4.5 32 87-120 47-79 (357)
419 1kew_A RMLB;, DTDP-D-glucose 4 40.2 25 0.00086 30.7 4.1 31 87-119 1-32 (361)
420 3nx4_A Putative oxidoreductase 39.7 32 0.0011 30.0 4.7 30 88-120 149-179 (324)
421 3k6j_A Protein F01G10.3, confi 39.7 32 0.0011 33.1 5.0 31 86-119 54-84 (460)
422 2z1m_A GDP-D-mannose dehydrata 39.7 32 0.0011 29.5 4.7 31 87-120 4-35 (345)
423 2bka_A CC3, TAT-interacting pr 39.4 28 0.00095 28.5 4.1 32 87-119 19-51 (242)
424 4dqv_A Probable peptide synthe 39.4 18 0.00063 33.9 3.3 36 85-120 72-108 (478)
425 4ea9_A Perosamine N-acetyltran 39.3 33 0.0011 28.5 4.6 32 87-121 13-44 (220)
426 3hn7_A UDP-N-acetylmuramate-L- 39.2 1.1E+02 0.0039 29.1 8.9 85 87-202 20-106 (524)
427 3fbs_A Oxidoreductase; structu 39.1 37 0.0013 28.2 4.9 33 85-120 1-33 (297)
428 2gv8_A Monooxygenase; FMO, FAD 38.6 1.2E+02 0.0039 27.8 8.6 73 88-185 214-289 (447)
429 2ewd_A Lactate dehydrogenase,; 38.5 21 0.00071 31.8 3.3 23 86-108 4-26 (317)
430 2zcu_A Uncharacterized oxidore 38.0 25 0.00084 29.5 3.6 31 88-119 1-32 (286)
431 2v6b_A L-LDH, L-lactate dehydr 38.0 35 0.0012 30.3 4.7 22 87-108 1-22 (304)
432 3itj_A Thioredoxin reductase 1 37.8 34 0.0012 29.1 4.5 33 85-120 21-53 (338)
433 2jl1_A Triphenylmethane reduct 37.6 19 0.00066 30.3 2.9 31 88-119 2-33 (287)
434 4a0s_A Octenoyl-COA reductase/ 37.6 27 0.00093 32.2 4.1 30 87-119 222-252 (447)
435 3fr7_A Putative ketol-acid red 37.2 20 0.00068 35.5 3.2 22 87-108 55-76 (525)
436 1y6j_A L-lactate dehydrogenase 37.1 34 0.0012 30.8 4.5 23 86-108 7-29 (318)
437 3hhp_A Malate dehydrogenase; M 36.3 22 0.00077 32.2 3.2 22 87-108 1-23 (312)
438 1pjc_A Protein (L-alanine dehy 36.3 37 0.0013 30.9 4.7 32 86-120 167-198 (361)
439 2gf3_A MSOX, monomeric sarcosi 36.2 43 0.0015 29.3 5.0 33 85-120 2-34 (389)
440 1gy8_A UDP-galactose 4-epimera 36.0 39 0.0013 29.9 4.7 31 87-120 3-35 (397)
441 3pqe_A L-LDH, L-lactate dehydr 36.0 32 0.0011 31.3 4.3 23 86-108 5-27 (326)
442 2p4h_X Vestitone reductase; NA 35.9 41 0.0014 28.7 4.7 30 87-119 2-32 (322)
443 2egg_A AROE, shikimate 5-dehyd 35.6 41 0.0014 29.9 4.8 31 87-120 142-173 (297)
444 2v6g_A Progesterone 5-beta-red 35.3 27 0.00092 30.4 3.5 34 87-120 2-38 (364)
445 3mog_A Probable 3-hydroxybutyr 35.1 33 0.0011 32.9 4.4 30 87-119 6-35 (483)
446 2ggs_A 273AA long hypothetical 34.7 34 0.0012 28.4 3.9 28 88-119 2-30 (273)
447 2uzz_A N-methyl-L-tryptophan o 34.7 37 0.0013 29.6 4.3 32 86-120 2-33 (372)
448 1ff9_A Saccharopine reductase; 34.7 37 0.0013 32.1 4.6 30 87-119 4-33 (450)
449 2xve_A Flavin-containing monoo 34.6 1.4E+02 0.0048 27.7 8.5 75 88-185 199-273 (464)
450 1wdk_A Fatty oxidation complex 34.5 24 0.00082 35.6 3.4 31 86-119 314-344 (715)
451 1ldn_A L-lactate dehydrogenase 34.3 28 0.00095 31.2 3.5 24 85-108 5-28 (316)
452 3qj4_A Renalase; FAD/NAD(P)-bi 34.2 51 0.0018 28.7 5.2 34 87-120 2-35 (342)
453 4a7p_A UDP-glucose dehydrogena 33.6 42 0.0014 31.9 4.7 32 86-120 8-39 (446)
454 1kjq_A GART 2, phosphoribosylg 33.6 48 0.0017 29.6 5.0 33 85-120 10-42 (391)
455 3p7m_A Malate dehydrogenase; p 33.5 51 0.0017 29.8 5.1 23 86-108 5-27 (321)
456 1omo_A Alanine dehydrogenase; 33.3 36 0.0012 30.6 4.1 33 87-121 126-158 (322)
457 1guz_A Malate dehydrogenase; o 33.2 51 0.0017 29.3 5.0 31 87-118 1-31 (310)
458 3rp8_A Flavoprotein monooxygen 33.0 48 0.0016 29.6 4.9 33 85-120 22-54 (407)
459 2c29_D Dihydroflavonol 4-reduc 32.9 37 0.0013 29.4 3.9 29 87-118 6-35 (337)
460 3vtf_A UDP-glucose 6-dehydroge 32.5 37 0.0013 32.5 4.2 30 86-118 21-50 (444)
461 1uay_A Type II 3-hydroxyacyl-C 32.4 41 0.0014 27.4 4.0 30 87-119 3-33 (242)
462 3d0o_A L-LDH 1, L-lactate dehy 32.4 29 0.001 31.1 3.3 23 86-108 6-28 (317)
463 3ado_A Lambda-crystallin; L-gu 32.1 45 0.0015 30.4 4.5 31 87-121 7-37 (319)
464 3nep_X Malate dehydrogenase; h 32.0 29 0.001 31.4 3.2 22 87-108 1-22 (314)
465 2jv8_A Uncharacterized protein 31.9 25 0.00086 25.0 2.2 22 142-163 11-32 (73)
466 2yut_A Putative short-chain ox 31.8 38 0.0013 26.9 3.6 27 88-119 2-29 (207)
467 2hjr_A Malate dehydrogenase; m 31.3 33 0.0011 31.0 3.4 24 85-108 13-36 (328)
468 1pzg_A LDH, lactate dehydrogen 31.1 33 0.0011 31.0 3.4 23 86-108 9-31 (331)
469 2ywl_A Thioredoxin reductase r 31.0 64 0.0022 25.1 4.8 31 87-120 2-32 (180)
470 1c0p_A D-amino acid oxidase; a 30.9 58 0.002 28.5 5.0 32 86-120 6-37 (363)
471 3iup_A Putative NADPH:quinone 30.6 33 0.0011 31.1 3.4 30 87-119 172-203 (379)
472 2dwc_A PH0318, 433AA long hypo 30.6 56 0.0019 29.9 4.9 33 85-120 18-50 (433)
473 1o6z_A MDH, malate dehydrogena 30.5 34 0.0012 30.4 3.3 22 87-108 1-23 (303)
474 3k5i_A Phosphoribosyl-aminoimi 30.2 43 0.0015 30.8 4.1 31 86-119 24-54 (403)
475 1jw9_B Molybdopterin biosynthe 30.0 34 0.0012 29.5 3.2 22 87-108 32-53 (249)
476 3f8d_A Thioredoxin reductase ( 29.4 71 0.0024 26.8 5.1 33 85-120 14-46 (323)
477 2r85_A PURP protein PF1517; AT 29.0 54 0.0018 28.3 4.4 31 85-119 1-31 (334)
478 3gvi_A Malate dehydrogenase; N 28.8 61 0.0021 29.4 4.8 23 86-108 7-29 (324)
479 4f6c_A AUSA reductase domain p 28.7 49 0.0017 30.0 4.2 31 86-119 69-100 (427)
480 1b8p_A Protein (malate dehydro 28.6 35 0.0012 30.7 3.1 24 85-108 4-28 (329)
481 3ax6_A Phosphoribosylaminoimid 28.4 61 0.0021 29.0 4.7 31 87-120 2-32 (380)
482 2q7v_A Thioredoxin reductase; 28.4 2.3E+02 0.008 23.9 8.4 81 88-185 154-246 (325)
483 3dme_A Conserved exported prot 28.2 70 0.0024 27.4 4.9 31 87-120 5-35 (369)
484 2cfc_A 2-(R)-hydroxypropyl-COM 28.0 72 0.0025 26.1 4.8 30 87-119 3-33 (250)
485 3h2z_A Mannitol-1-phosphate 5- 28.0 42 0.0014 31.5 3.6 30 87-118 1-30 (382)
486 3oz2_A Digeranylgeranylglycero 28.0 72 0.0024 27.5 5.0 32 86-120 4-35 (397)
487 3ef6_A Toluene 1,2-dioxygenase 28.0 71 0.0024 29.0 5.1 36 85-121 1-36 (410)
488 2ehd_A Oxidoreductase, oxidore 27.7 59 0.002 26.5 4.2 31 86-119 5-36 (234)
489 4e4t_A Phosphoribosylaminoimid 27.6 60 0.002 30.1 4.6 30 87-119 36-65 (419)
490 1nyt_A Shikimate 5-dehydrogena 27.3 70 0.0024 27.6 4.8 31 87-120 120-150 (271)
491 1ez4_A Lactate dehydrogenase; 27.0 43 0.0015 30.1 3.4 23 86-108 5-27 (318)
492 1k0i_A P-hydroxybenzoate hydro 26.8 51 0.0018 29.2 3.9 32 86-120 2-33 (394)
493 1mld_A Malate dehydrogenase; o 26.8 39 0.0013 30.3 3.1 22 87-108 1-23 (314)
494 3u62_A Shikimate dehydrogenase 26.8 60 0.0021 28.3 4.3 30 88-120 110-140 (253)
495 3tl2_A Malate dehydrogenase; c 26.8 70 0.0024 28.8 4.8 22 87-108 9-30 (315)
496 2z04_A Phosphoribosylaminoimid 26.7 61 0.0021 28.7 4.4 31 87-120 2-32 (365)
497 1kyq_A Met8P, siroheme biosynt 26.7 52 0.0018 29.4 3.9 30 87-119 14-43 (274)
498 2vou_A 2,6-dihydroxypyridine h 26.5 78 0.0027 28.2 5.1 32 86-120 5-36 (397)
499 2zqz_A L-LDH, L-lactate dehydr 26.4 45 0.0015 30.2 3.4 24 85-108 8-31 (326)
500 1t2d_A LDH-P, L-lactate dehydr 26.2 45 0.0015 30.1 3.4 32 87-121 5-36 (322)
No 1
>3lvf_P GAPDH 1, glyceraldehyde-3-phosphate dehydrogenase 1; oxidoreductase, glycolysis, rossmann fold; HET: NAD; 1.70A {Staphylococcus aureus} PDB: 3vaz_P* 3l6o_Q 3k73_Q 3lc2_O* 3lc7_O 3lc1_P* 3hq4_R* 3kv3_O* 3l4s_Q* 3k9q_Q* 3ksd_Q* 3ksz_O*
Probab=100.00 E-value=3e-64 Score=473.56 Aligned_cols=179 Identities=45% Similarity=0.722 Sum_probs=172.2
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEec
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~ 164 (269)
|++||||||||||||+++|+++++ +++++|+|||..|+++++|||||||+||+|+++|++ ++++|.+||++|+|+++
T Consensus 3 m~~kv~INGfGrIGr~v~R~~~~~--~~~~ivaind~~d~~~~a~l~kyDS~hG~f~~~v~~-~~~~l~inGk~I~v~~e 79 (338)
T 3lvf_P 3 MAVKVAINGFGRIGRLAFRRIQEV--EGLEVVAVNDLTDDDMLAHLLKYDTMQGRFTGEVEV-VDGGFRVNGKEVKSFSE 79 (338)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTS--TTEEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEE-ETTEEEETTEEEEEECC
T ss_pred ccEEEEEECCCcHHHHHHHHHHHC--CCceEEEEecCCCHHHHHHHhccCCCCCCcCCeEEE-cCCEEEECCEEEEEEEe
Confidence 778999999999999999999986 469999999999999999999999999999999998 58899999999999999
Q ss_pred CCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecCCCCCCCCeEEeecCccccCCCCCceEEcCChhHHh
Q 024349 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNC 244 (269)
Q Consensus 165 ~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP~k~~Dip~iV~GVN~~~~~~~~~~IISnaSCTTn~ 244 (269)
++|+++||+++|+|||+||||.|+++|+++.|+++||||||||+|+++ |+||||||||++.|+++ ++|||||||||||
T Consensus 80 ~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViISaps~~-d~p~vV~gVN~~~~~~~-~~IISNasCTTn~ 157 (338)
T 3lvf_P 80 PDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATG-DLKTIVFNTNHQELDGS-ETVVSGASCTTNS 157 (338)
T ss_dssp SCGGGSCTTTTTCSEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBS-SCEECCTTTTGGGCCSC-CSEEECCCHHHHH
T ss_pred cccccCCccccCCCEEEEccCCcCCHHHHHHHHHcCCCEEEECCCCCC-CCCEEeccCCHHHcCcc-CCeEecCchhhhh
Confidence 999999999999999999999999999999999999999999999975 78999999999999876 8999999999999
Q ss_pred HHHHHHHHhhhcCceEEEEee-ecc
Q 024349 245 LAPFVKVMDEELGKQSDLLND-HSV 268 (269)
Q Consensus 245 LaPvlkvL~d~fGI~~g~vTT-hsv 268 (269)
|+|++|+|||+|||++++||| ||+
T Consensus 158 Lap~lkvL~d~fGI~~g~mTTvha~ 182 (338)
T 3lvf_P 158 LAPVAKVLNDDFGLVEGLMTTIHAY 182 (338)
T ss_dssp HHHHHHHHHHHHCEEEEEEEEEEEC
T ss_pred hHHHHHHHHHhcCEEEEEEeeeccc
Confidence 999999999999999999999 986
No 2
>3doc_A Glyceraldehyde 3-phosphate dehydrogenase; ssgcid, structural genomics, PSI, protein structure initiative; HET: NAD; 2.40A {Brucella melitensis biovar ABORTUS2308} PDB: 3l0d_A*
Probab=100.00 E-value=2.1e-64 Score=474.32 Aligned_cols=181 Identities=44% Similarity=0.752 Sum_probs=172.9
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEec
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~ 164 (269)
|++||||||||||||+++|+++++..+++++|+|||+.|+++++|||||||+||+|+++|++ ++++|.+||++|+|+++
T Consensus 1 m~~kv~INGfGrIGr~v~Ra~~~~~~~~~~ivaiNd~~d~~~~a~l~kyDS~hG~f~~~v~~-~~~~l~i~Gk~I~v~~e 79 (335)
T 3doc_A 1 MAVRVAINGFGRIGRNILRAIVESGRTDIQVVAINDLGPVETNAHLLRYDSVHGRFPKEVEV-AGDTIDVGYGPIKVHAV 79 (335)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCSEEEEEEECSSCHHHHHHHHHEETTTEECSSCCEE-CSSEEESSSSEEEEECC
T ss_pred CCEEEEEECCCcHHHHHHHHHHhccCCCeEEEEEeCCCCHHHHHHHhcccCCCCCCCCeEEE-ecCEEEECCEEEEEEee
Confidence 46899999999999999999998743479999999999999999999999999999999998 68999999999999999
Q ss_pred CCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecCCCCCCCCeEEeecCccccCCCCCceEEcCChhHHh
Q 024349 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNC 244 (269)
Q Consensus 165 ~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP~k~~Dip~iV~GVN~~~~~~~~~~IISnaSCTTn~ 244 (269)
+||+++||+++|+|||+||||.|+++|+++.|+++||||||||+|+++ ++||||||||++.|+++ ++|||||||||||
T Consensus 80 ~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~d-~~p~vV~gVN~~~~~~~-~~IISNasCTTn~ 157 (335)
T 3doc_A 80 RNPAELPWKEENVDIALECTGIFTSRDKAALHLEAGAKRVIVSAPADG-ADLTVVYGVNNDKLTKD-HLVISNASCTTNC 157 (335)
T ss_dssp SSTTSSCTTTTTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCTT-CSEECCTTTTGGGCCTT-CCEEECCCHHHHH
T ss_pred cccccccccccCCCEEEEccCccCCHHHHHHHHHcCCCEEEECCCCCC-CCCEEecccCHHHhCcc-CCeEecCchhhhh
Confidence 999999999999999999999999999999999999999999999986 67999999999999886 8999999999999
Q ss_pred HHHHHHHHhhhcCceEEEEee-ecc
Q 024349 245 LAPFVKVMDEELGKQSDLLND-HSV 268 (269)
Q Consensus 245 LaPvlkvL~d~fGI~~g~vTT-hsv 268 (269)
|+|++|+|||+|||++++||| ||+
T Consensus 158 Lap~lk~L~d~fGI~~g~mTTvha~ 182 (335)
T 3doc_A 158 LAPVAQVLNDTIGIEKGFMTTIHSY 182 (335)
T ss_dssp HHHHHHHHHHHTCEEEEEEEEEEEC
T ss_pred hHHhHHHHHHHcCEEEEEEEeeeec
Confidence 999999999999999999999 986
No 3
>4dib_A GAPDH, glyceraldehyde 3-phosphate dehydrogenase; niaid, structural genomics, national institute of allergy AN infectious diseases; 2.55A {Bacillus anthracis}
Probab=100.00 E-value=6.3e-64 Score=472.32 Aligned_cols=180 Identities=48% Similarity=0.785 Sum_probs=171.1
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEec
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~ 164 (269)
+++||||||||||||+++|+++++ +++++|+|||+.|+++++|||||||+||+|+++|++ ++++|.|||++|+|+++
T Consensus 3 ~~~kv~INGfGrIGr~v~Ra~~~~--~~~~ivaINd~~d~~~~a~llkyDS~hG~f~~~v~~-~~~~l~inGk~I~v~~e 79 (345)
T 4dib_A 3 AMTRVAINGFGRIGRMVFRQAIKE--SAFEIVAINASYPSETLAHLIKYDTVHGKFDGTVEA-FEDHLLVDGKMIRLLNN 79 (345)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTC--SSSEEEEEECSSCHHHHHHHHHEETTTEECSSCEEE-CSSEEEETTEEEEEECC
T ss_pred ccEEEEEECCCcHHHHHHHHHHhC--CCceEEEEcCCCCHHHHHHHhcccCCCCCCCCcEEE-cCCEEEECCEEEEEeec
Confidence 358999999999999999999987 469999999999999999999999999999999998 68999999999999999
Q ss_pred CCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecCCCCCCCCeEEeecCccccCCCCCceEEcCChhHHh
Q 024349 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNC 244 (269)
Q Consensus 165 ~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP~k~~Dip~iV~GVN~~~~~~~~~~IISnaSCTTn~ 244 (269)
++|+++||+++|+|||+||||.|+++|+++.|+++||||||||+|+++ |+||||||||++.|++..++|||||||||||
T Consensus 80 ~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViISaps~~-d~p~vV~gVN~~~~~~~~~~IISNaSCTTn~ 158 (345)
T 4dib_A 80 RDPKELPWTDLGVEVVIEATGKFNSKEKAILHVEAGAKKVILTAPGKN-EDVTIVVGVNEDQLDITKHTVISNASCTTNC 158 (345)
T ss_dssp SCGGGSCTTTTTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBS-CSEECCTTTTGGGCCTTTCSEEECCCHHHHH
T ss_pred CChhhCCccccCccEEEEeccCcCCHHHHHHHHHCCCCEEEECCCCCC-CCCEEEecCCHHHcCcccCeEEECCchhhhh
Confidence 999999999999999999999999999999999999999999999975 7899999999999987227999999999999
Q ss_pred HHHHHHHHhhhcCceEEEEee-ecc
Q 024349 245 LAPFVKVMDEELGKQSDLLND-HSV 268 (269)
Q Consensus 245 LaPvlkvL~d~fGI~~g~vTT-hsv 268 (269)
|+|++|+|||+|||++++||| ||+
T Consensus 159 Lap~lkvL~d~fGI~~g~mTTvhA~ 183 (345)
T 4dib_A 159 LAPVVKVLDEQFGIENGLMTTVHAY 183 (345)
T ss_dssp HHHHHHHHHHHHCEEEEEEEEEECC
T ss_pred hHHHHHHHHHhcCeEEEEEEeeeec
Confidence 999999999999999999999 986
No 4
>3pym_A GAPDH 3, glyceraldehyde-3-phosphate dehydrogenase 3; NAD(P)-binding rossmann-fold domain, alpha and beta protein, oxidoreductase; HET: NAD; 2.00A {Saccharomyces cerevisiae} PDB: 2i5p_O*
Probab=100.00 E-value=2.1e-63 Score=467.11 Aligned_cols=176 Identities=48% Similarity=0.801 Sum_probs=169.4
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCC-CCcccccccccccccccccCceEEEecCCeEEECCEEEEEEecC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS-GGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~-~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~~ 165 (269)
+||||||||||||+++|+++++ +++++|+|||+ .|+++++|||||||+||+|+++|++ ++++|++||++|+|++++
T Consensus 2 ~kv~INGfGrIGr~v~R~~~~~--~~~~ivaiNd~~~d~~~~a~l~kyDS~hG~f~~~v~~-~~~~l~i~Gk~I~v~~e~ 78 (332)
T 3pym_A 2 VRVAINGFGRIGRLVMRIALSR--PNVEVVALNDPFITNDYAAYMFKYDSTHGRYAGEVSH-DDKHIIVDGKKIATYQER 78 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHS--TTCEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEE-CSSEEEETTEEEEEECCS
T ss_pred eEEEEECCCcHHHHHHHHHHhC--CCcEEEEEeCCCCCHHHHHHHhcccCCCCCCCCcEEE-cCCEEEECCEEEEEEeec
Confidence 6999999999999999999987 46999999998 8999999999999999999999998 689999999999999999
Q ss_pred CCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecCCCCCCCCeEEeecCccccCCCCCceEEcCChhHHhH
Q 024349 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCL 245 (269)
Q Consensus 166 ~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP~k~~Dip~iV~GVN~~~~~~~~~~IISnaSCTTn~L 245 (269)
||+++||+++|+|||+||||.|+++|+++.|+++||||||||+|++ |+||||||||++.|+++ ++||||||||||||
T Consensus 79 dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~--d~p~vV~gVN~~~~~~~-~~IISnasCTTn~L 155 (332)
T 3pym_A 79 DPANLPWGSSNVDIAIDSTGVFKELDTAQKHIDAGAKKVVITAPSS--TAPMFVMGVNEEKYTSD-LKIVSNASCTTNCL 155 (332)
T ss_dssp SGGGSCTTTTTCSEEEECSSSSCSHHHHHHHHHTTCSEEEESSCCS--SSCBCCTTTTGGGCCTT-CCEEECCCHHHHHH
T ss_pred ccccCCccccCccEEEEecccccCHHHHHHHHHcCCCEEEECCCCC--CCCeEeeccchhhcCcc-ccEEecCcchhhhh
Confidence 9999999999999999999999999999999999999999999986 47999999999999886 89999999999999
Q ss_pred HHHHHHHhhhcCceEEEEee-ecc
Q 024349 246 APFVKVMDEELGKQSDLLND-HSV 268 (269)
Q Consensus 246 aPvlkvL~d~fGI~~g~vTT-hsv 268 (269)
+|++|+|||+|||++++||| ||+
T Consensus 156 ap~lkvL~d~fGI~~g~mTTvha~ 179 (332)
T 3pym_A 156 APLAKVINDAFGIEEGLMTTVHSL 179 (332)
T ss_dssp HHHHHHHHHHHCEEEEEEEEEEEC
T ss_pred HHHHHHHHHhcCeEEEEEEEEeec
Confidence 99999999999999999999 986
No 5
>3v1y_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosol; rossmann fold; HET: NAD; 1.86A {Oryza sativa japonica group} PDB: 3e5r_O* 3e6a_O
Probab=100.00 E-value=8.4e-63 Score=463.78 Aligned_cols=178 Identities=45% Similarity=0.786 Sum_probs=169.4
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCC-CCcccccccccccccccccCc-eEEEecCCeEEECCEEEEEEe
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS-GGVKNASHLLKYDSLLGTFKA-DVKIVDNETISVDGKLIKVVS 163 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~-~~~~~~a~LlkyDS~hG~f~g-~v~~~~~~~L~inGk~I~V~~ 163 (269)
++||||||||||||+++|+++++ +++++|+|||+ .|+++++|||||||+||+|++ +|+++++++|.+||++|+|++
T Consensus 3 ~~kv~INGfGrIGr~v~R~~~~~--~~~~ivaiNd~~~d~~~~a~l~kyDS~hG~f~~~~v~~~~~~~l~i~Gk~I~v~~ 80 (337)
T 3v1y_O 3 KIKIGINGFGRIGRLVARVALQS--EDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTVFG 80 (337)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTC--SSEEEEEEECTTSCHHHHHHHHHCCTTTCCCCSSCEEEEETTEEEETTEEEEEEC
T ss_pred ceEEEEECCChHHHHHHHHHHhC--CCcEEEEEeCCCCCHHHHHHHhhhccCCCcccCceEEEcCCcEEEECCEEEEEEE
Confidence 47999999999999999999986 46999999999 899999999999999999999 999854339999999999999
Q ss_pred cCCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecCCCCCCCCeEEeecCccccCCCCCceEEcCChhHH
Q 024349 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTN 243 (269)
Q Consensus 164 ~~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP~k~~Dip~iV~GVN~~~~~~~~~~IISnaSCTTn 243 (269)
++||+++||+++|+|||+||||.|+++|+++.|+++||||||||+|++ |+||||||||++.|+++ ++||||||||||
T Consensus 81 e~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~--d~p~vV~gVN~~~~~~~-~~IISnasCTTn 157 (337)
T 3v1y_O 81 IRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPSK--DAPMFVCGVNEDKYTSD-IDIVSNASCTTN 157 (337)
T ss_dssp CSSGGGCCHHHHTCCEEEECSSSCCSHHHHTHHHHTTCCEEEESSCCS--SSCBCCTTTTGGGCCTT-CCEEECCCHHHH
T ss_pred ecCcccCCccccCCcEEEEeccccCCHHHHHHHHHcCCCEEEECCCCC--CCCeECCCCCHHHcCCC-CcEEecCchhhh
Confidence 999999999999999999999999999999999999999999999986 58999999999999986 899999999999
Q ss_pred hHHHHHHHHhhhcCceEEEEee-ecc
Q 024349 244 CLAPFVKVMDEELGKQSDLLND-HSV 268 (269)
Q Consensus 244 ~LaPvlkvL~d~fGI~~g~vTT-hsv 268 (269)
||+|++|+|||+|||++++||| ||+
T Consensus 158 ~Lap~lkvL~d~fGI~~g~mTTvha~ 183 (337)
T 3v1y_O 158 CLAPLAKVIHDNFGIIEGLMTTVHAI 183 (337)
T ss_dssp HHHHHHHHHHHHHCEEEEEEEEEECC
T ss_pred hHHHHHHHHHHhcCeEEEEEeeeeec
Confidence 9999999999999999999999 986
No 6
>3ids_C GAPDH, glyceraldehyde-3-phosphate dehydrogenase, glycoso; irreversible inhibitor, protein-ligand complex,X-RAY, glycol NAD, oxireductase; HET: NAD; 1.80A {Trypanosoma cruzi} PDB: 1ml3_A* 1qxs_C* 3dmt_A* 1k3t_A* 2x0n_A* 1gga_O* 1i32_A* 1a7k_A* 1i33_A* 1gyp_A* 1gyq_A*
Probab=100.00 E-value=7.2e-63 Score=467.19 Aligned_cols=182 Identities=43% Similarity=0.764 Sum_probs=169.9
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCC--CCCceEEEEcCC-CCcccccccccccccccccCceEEEe-------cCCeEEE
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRK--DSPLDVVVVNDS-GGVKNASHLLKYDSLLGTFKADVKIV-------DNETISV 154 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~--~~~l~iVaInd~-~~~~~~a~LlkyDS~hG~f~g~v~~~-------~~~~L~i 154 (269)
|++||||||||||||+++|+|.++. .+++++|+|||+ .|++++||||||||+||+|+++|+++ ++++|+|
T Consensus 1 m~~kv~INGFGrIGr~v~Ra~~~~~~~~~~~~vvaINd~~~d~~~~a~llkyDS~hG~f~~~v~~~~~~~~~~~~~~l~i 80 (359)
T 3ids_C 1 MPIKVGINGFGRIGRMVFQALCEDGLLGTEIDVVAVVDMNTDAEYFAYQMRYDTVHGKFKYEVTTTKSSPSVAKDDTLVV 80 (359)
T ss_dssp CCEEEEEECTTHHHHHHHHHHHHTTCBTTTEEEEEEECSSCCHHHHHHHHHEETTTEECSSCEEEECSCTTSSSCCEEEE
T ss_pred CceEEEEECCChHHHHHHHHhHHHHhcCCCcEEEEEecCCCCHHHHHHHhcccCCCCCEeeEEEecccccccCCCCEEEE
Confidence 5689999999999999999943331 246999999994 89999999999999999999999983 6889999
Q ss_pred CCEEEEEEe-cCCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecCCCCCCCCeEEeecCccccCC-CCC
Q 024349 155 DGKLIKVVS-NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDH-EVA 232 (269)
Q Consensus 155 nGk~I~V~~-~~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP~k~~Dip~iV~GVN~~~~~~-~~~ 232 (269)
||++|+|++ +++|+++||+++|+|||+||||.|+++|+++.|+++||||||||+|+++ |+||||||||++.|++ + +
T Consensus 81 nGk~I~v~~~e~dp~~i~w~~~gvDiVlesTG~f~s~e~A~~hl~aGAkkViISaps~~-d~p~vV~gVN~~~~~~~~-~ 158 (359)
T 3ids_C 81 NGHRILCVKAQRNPADLPWGKLGVEYVIESTGLFTAKAAAEGHLRGGARKVVISAPASG-GAKTLVMGVNHHEYNPSE-H 158 (359)
T ss_dssp TTEEEEECCCCSSTTTSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCCEEEESSCCBS-SCEECCTTTTGGGCCTTT-C
T ss_pred CCEEEEEEEccCCcccCCccccCccEEEEeccccCCHHHHHHHHHcCCCEEEECCCCCC-CCCeEEeccCHHHcCCCC-C
Confidence 999999998 9999999999999999999999999999999999999999999999975 7899999999999987 5 7
Q ss_pred ceEEcCChhHHhHHHHHHHH-hhhcCceEEEEee-ecc
Q 024349 233 NIVSNASCTTNCLAPFVKVM-DEELGKQSDLLND-HSV 268 (269)
Q Consensus 233 ~IISnaSCTTn~LaPvlkvL-~d~fGI~~g~vTT-hsv 268 (269)
+||||||||||||+|++|+| ||+|||++++||| ||+
T Consensus 159 ~IISNaSCTTn~Lap~lkvL~~d~fGI~~g~mTTvha~ 196 (359)
T 3ids_C 159 HVVSNASCTTNCLAPIVHVLVKEGFGVQTGLMTTIHSY 196 (359)
T ss_dssp SEEECCCHHHHHHHHHHHHHHHTTCCCSEEEEEEEEEC
T ss_pred CEEECCchHhhhHHHhhhhhhhccCCeEEEEEeeeeec
Confidence 99999999999999999999 9999999999999 986
No 7
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=100.00 E-value=7.2e-62 Score=458.82 Aligned_cols=177 Identities=46% Similarity=0.762 Sum_probs=169.3
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCC-CCcccccccccccccccccCceEEEecCCeEEECCEEEEEEe
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS-GGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~-~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~ 163 (269)
.++||||||||||||+++|+++++. +++|+|||+ .++++++|||||||+||+|+++|++ ++++|.+||++|+|++
T Consensus 6 ~~~kvgInGFGRIGrlv~R~~~~~~---veivainDp~~d~~~~a~l~~yDS~hG~f~~~v~~-~~~~l~i~Gk~I~v~~ 81 (346)
T 3h9e_O 6 RELTVGINGFGRIGRLVLRACMEKG---VKVVAVNDPFIDPEYMVYMFKYDSTHGRYKGSVEF-RNGQLVVDNHEISVYQ 81 (346)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT---CEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEE-ETTEEEETTEEEEEEC
T ss_pred CeeEEEEECCChHHHHHHHHHHhCC---CEEEEEeCCCCChhHhcccccccCCCCCCCCcEEE-cCCEEEECCEEEEEEe
Confidence 4579999999999999999999862 999999997 8999999999999999999999998 6899999999999999
Q ss_pred cCCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecCCCCCCCCeEEeecCccccCC-CCCceEEcCChhH
Q 024349 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDH-EVANIVSNASCTT 242 (269)
Q Consensus 164 ~~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP~k~~Dip~iV~GVN~~~~~~-~~~~IISnaSCTT 242 (269)
+++|+++||+++|+|||+||||.|+++|+++.|+++||||||||+|++ |+||||||||++.|++ + ++|||||||||
T Consensus 82 e~dp~~i~W~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkVVIsaps~--d~plvV~gVN~~~~~~~~-~~IISNasCTT 158 (346)
T 3h9e_O 82 CKEPKQIPWRAVGSPYVVESTGVYLSIQAASDHISAGAQRVVISAPSP--DAPMFVMGVNENDYNPGS-MNIVSNASCTT 158 (346)
T ss_dssp CSSGGGCCGGGGTSCEEEECSSSCCSHHHHHHHHHTTCSEEEESSCCS--SSCBCCTTTTGGGCCTTT-CSEEECCCHHH
T ss_pred cCChhhCCcccccccEEEEeccccCCHHHHHHHHHcCCCEEEECCCCC--CCCeeCcccCHHHcCccc-CCEEECCcchh
Confidence 999999999999999999999999999999999999999999999985 5899999999999987 5 79999999999
Q ss_pred HhHHHHHHHHhhhcCceEEEEee-ecc
Q 024349 243 NCLAPFVKVMDEELGKQSDLLND-HSV 268 (269)
Q Consensus 243 n~LaPvlkvL~d~fGI~~g~vTT-hsv 268 (269)
|||+|++|+|||+|||++++||| ||+
T Consensus 159 n~Lap~lkvL~d~fGI~~g~mTTvhA~ 185 (346)
T 3h9e_O 159 NCLAPLAKVIHERFGIVEGLMTTVHSY 185 (346)
T ss_dssp HHHHHHHHHHHHHHCEEEEEEEEEEEC
T ss_pred hhHHHHHHHHHHHhCeeEEEEeeeeec
Confidence 99999999999999999999999 986
No 8
>3hja_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; niaid, ssgcid, decode, UW, SBRI, LYME disease, non-hodgkin lymphomas, cytoplasm; HET: NAD; 2.20A {Borrelia burgdorferi B31}
Probab=100.00 E-value=1.3e-61 Score=458.16 Aligned_cols=178 Identities=51% Similarity=0.854 Sum_probs=170.3
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEec
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~ 164 (269)
|++||||||||||||+++|+|++| ++++|+|||+.|+++++|||||||+||+|+++++. ++++|++||++|+|+++
T Consensus 20 ~~~kVaInGfGrIGr~vlr~l~e~---~~~ivaIndl~d~~~~a~llkydS~hG~f~~~v~~-~~~~l~i~Gk~I~v~~~ 95 (356)
T 3hja_A 20 GSMKLAINGFGRIGRNVFKIAFER---GIDIVAINDLTDPKTLAHLLKYDSTFGVYNKKVES-RDGAIVVDGREIKIIAE 95 (356)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHT---TCEEEEEECSSCHHHHHHHHHEETTTEECSSCEEE-ETTEEEETTEEEEEECC
T ss_pred CCeEEEEECCCHHHHHHHHHHHHC---CCCEEEEeCCCCHHHhhhhhccccCCCCCCCCEEE-cCCEEEECCEEEEEEEc
Confidence 468999999999999999999997 48999999999999999999999999999999998 68899999999999999
Q ss_pred CCCCCCCCCCCCccEEEEcCCCCCC----hhhHHHHHH-cCCCEEEEecCCCCCCCCeEEeecCccccCCCCCceEEcCC
Q 024349 165 RDPLQLPWAELGIDIVIEGTGVFVD----GPGAGKHIQ-AGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNAS 239 (269)
Q Consensus 165 ~~P~~i~w~~~gvDiVve~TG~f~~----~e~a~~Hl~-aGakkVIISAP~k~~Dip~iV~GVN~~~~~~~~~~IISnaS 239 (269)
+||+++||+++|+|||+||||.|++ +|+++.|++ +||||||||+|+++ ++||||||||++.|+++ ++||||||
T Consensus 96 ~dp~~i~w~~~gvDiV~esTG~f~s~~~~~e~a~~hl~~aGAkkVVIsaps~d-~vp~vV~gVN~~~~~~~-~~IISNaS 173 (356)
T 3hja_A 96 RDPKNLPWAKLGIDVVIESTGVFSSATSDKGGYLDHVNHAGAKKVILTVPAKD-EIKTIVLGVNDHDINSD-LKAVSNAS 173 (356)
T ss_dssp SSGGGCCHHHHTCSEEEECSSSCCSSCCTTCCGGGGTTTSCCSEEEESSCCSS-CCEECCTTTSGGGCCTT-CCEEECCC
T ss_pred CChhhCCccccCCCEEEEecccccccchhHHHHHHHHHhCCCeEEEECCCCCC-CCCEEeccCCHHHcCcC-ccEEECCc
Confidence 9999999999999999999999999 999999999 99999999999987 78999999999999986 79999999
Q ss_pred hhHHhHHHHHHHHhhhcCceEEEEee-ecc
Q 024349 240 CTTNCLAPFVKVMDEELGKQSDLLND-HSV 268 (269)
Q Consensus 240 CTTn~LaPvlkvL~d~fGI~~g~vTT-hsv 268 (269)
||||||+|++|+|||+|||++++||| ||+
T Consensus 174 CTTn~Lap~lkvL~d~fGI~~g~mTTvhA~ 203 (356)
T 3hja_A 174 CTTNCLAPLAKVLHESFGIEQGLMTTVHAY 203 (356)
T ss_dssp HHHHHHHHHHHHHHHHHCEEEEEEEEEEEC
T ss_pred cchhhhhHhHHHHHHhcCeEEEEEEEEEec
Confidence 99999999999999999999999999 986
No 9
>1obf_O Glyceraldehyde 3-phosphate dehydrogenase; glycolytic pathway, oxidoreductase, free-NAD GAPDH; HET: PG4; 1.7A {Achromobacter xylosoxidans} SCOP: c.2.1.3 d.81.1.1 PDB: 3gnq_A*
Probab=100.00 E-value=7.4e-59 Score=437.11 Aligned_cols=179 Identities=45% Similarity=0.796 Sum_probs=169.9
Q ss_pred eeEEEEcCChHHHHHHHHHHhCC-CCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEecC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRK-DSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~-~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~~ 165 (269)
+||||||||||||+++|+|+++. .+++++|+|||+.++++++|||+|||+||+|+++++. +++.|.+||+.|+|++++
T Consensus 2 ikVaInGfGrIGr~v~r~l~~~~~~~~~evvaInd~~~~~~~a~ll~ydS~hg~f~~~v~~-~~~~l~v~g~~i~v~~~~ 80 (335)
T 1obf_O 2 IRVAINGYGRIGRNILRAHYEGGKSHDIEIVAINDLGDPKTNAHLTRYDTAHGKFPGTVSV-NGSYMVVNGDKIRVDANR 80 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSCSSEEEEEEECSSCHHHHHHHHHEETTTEECSSCEEE-ETTEEEETTEEEEEECCS
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCCcEEEEEeCCCCHHHHHHHhccCCcCCCCCCCEEE-eCCEEEECCEEEEEEEcC
Confidence 69999999999999999999872 2469999999999999999999999999999999997 588999999999999999
Q ss_pred CCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecCCCCCCCC-eEEeecCccccCCCCCceEEcCChhHHh
Q 024349 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIP-TYVVGVNEKDYDHEVANIVSNASCTTNC 244 (269)
Q Consensus 166 ~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP~k~~Dip-~iV~GVN~~~~~~~~~~IISnaSCTTn~ 244 (269)
||+++||++.|+||||||||.|+++++++.|+++||||||||+|+++ |+| |||||||++.|++. ++|||||||||||
T Consensus 81 dp~~~~w~~~gvDiV~estG~f~s~e~a~~h~~aGakkVviSaps~~-dvp~~vV~gVN~~~~~~~-~~IISNasCTTn~ 158 (335)
T 1obf_O 81 NPAQLPWGALKVDVVLECTGFFTTKEKAGAHIKGGAKKVIISAPGGA-DVDATVVYGVNHGTLKST-DTVISNASCTTNC 158 (335)
T ss_dssp CGGGSCTTTTTCSEEEECSSSCCSHHHHHHHHHHTCSEEEESSCCCT-TSSEECCTTTSGGGCCTT-CCEEECCCHHHHH
T ss_pred CcccCCccccCCCEEEEccCccccHHHHHHHHHcCCCEEEECCcccC-CCCceEEccCCHHHhCcC-ccEEeCCcHHHHH
Confidence 99999999999999999999999999999999999999999999963 789 99999999999875 7899999999999
Q ss_pred HHHHHHHHhhhcCceEEEEee-ecc
Q 024349 245 LAPFVKVMDEELGKQSDLLND-HSV 268 (269)
Q Consensus 245 LaPvlkvL~d~fGI~~g~vTT-hsv 268 (269)
|+|++|+|||+|||++++||| ||+
T Consensus 159 Lap~lk~L~d~fGI~~~~mTTvha~ 183 (335)
T 1obf_O 159 LAPLVKPLNDKLGLQDGLMTTVHAY 183 (335)
T ss_dssp HHHHHHHHHHHTCEEEEEEEEEEEC
T ss_pred HHHHHHHHHHhcCeeEEEEEEEchh
Confidence 999999999999999999999 986
No 10
>2b4r_O Glyceraldehyde-3-phosphate dehydrogenase; SGPP, structural genomics, PSI, structural genomi pathogenic protozoa consortium; HET: NAD AES; 2.25A {Plasmodium falciparum} SCOP: c.2.1.3 d.81.1.1 PDB: 2b4t_O* 1ywg_O*
Probab=100.00 E-value=1.3e-58 Score=436.82 Aligned_cols=178 Identities=44% Similarity=0.770 Sum_probs=169.7
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC-CCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEec
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND-SGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd-~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~ 164 (269)
.+||||||||||||+++|+++++ +++++|+||| ..++++++|||||||+||+|+++++. +++.|.+||+.|+|+++
T Consensus 11 ~~kv~INGfGrIGr~v~ra~~~~--~~~evvaInd~~~~~~~~a~l~~yDS~hg~~~~~v~~-~~~~l~v~Gk~i~v~~~ 87 (345)
T 2b4r_O 11 ATKLGINGFGRIGRLVFRAAFGR--KDIEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTH-ADGFLLIGEKKVSVFAE 87 (345)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTC--SSEEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEE-ETTEEEESSCEEEEECC
T ss_pred heEEEEeCCchHHHHHHHHHhhC--CCcEEEEEcCCCCChHHHHHHhccCCCCCcCCCCEEE-cCCEEEECCEEEEEEEc
Confidence 58999999999999999999986 4699999999 58999999999999999999999997 58899999999999999
Q ss_pred CCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecCCCCCCCCeEEeecCccccCCCCCceEEcCChhHHh
Q 024349 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNC 244 (269)
Q Consensus 165 ~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP~k~~Dip~iV~GVN~~~~~~~~~~IISnaSCTTn~ 244 (269)
++|++++|+++|+||||||||.|+++++++.|+++||||||||+|+++ |+|+||||||++.|++. ++|||||||||||
T Consensus 88 ~dp~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVVIsaps~~-dvplvV~gVN~~~~~~~-~~IISNasCTTn~ 165 (345)
T 2b4r_O 88 KDPSQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPPKD-DTPIYVMGINHHQYDTK-QLIVSNASCTTNC 165 (345)
T ss_dssp SSGGGCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCSS-SCCBCCTTTTGGGCCTT-CCEEECCCHHHHH
T ss_pred CCcccCcccccCCCEEEECcCccccHhhHHHHHHCCCCEEEECCCCCC-CCCEEEecCCHHHhCCC-CCEEECCchHHHH
Confidence 999999999999999999999999999999999999999999999974 68999999999999875 7899999999999
Q ss_pred HHHHHHHHhhhcCceEEEEee-ecc
Q 024349 245 LAPFVKVMDEELGKQSDLLND-HSV 268 (269)
Q Consensus 245 LaPvlkvL~d~fGI~~g~vTT-hsv 268 (269)
|+|++|+|||+|||++++||| ||+
T Consensus 166 Lap~lk~L~d~fGI~~~~mTTvhA~ 190 (345)
T 2b4r_O 166 LAPLAKVINDRFGIVEGLMTTVHAS 190 (345)
T ss_dssp HHHHHHHHHHHHCEEEEEEEEEECC
T ss_pred HHHHHHHHHHhcCeeEEEEEEeehh
Confidence 999999999999999999999 986
No 11
>2ep7_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase, structural genomics, NPPSFA; HET: NAD; 2.30A {Aquifex aeolicus}
Probab=100.00 E-value=2.7e-58 Score=434.31 Aligned_cols=179 Identities=54% Similarity=0.906 Sum_probs=168.5
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEec
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~ 164 (269)
|++||||||||||||+++|+|+++ +++++|+|||..++++++|||+|||+||+|+++++. +++.|.+||+.|+|+++
T Consensus 1 m~ikV~InGfGrIGr~v~r~l~~~--~~~evvaInd~~~~~~~a~ll~yDs~hG~~~~~v~~-~~~~l~v~Gk~i~v~~~ 77 (342)
T 2ep7_A 1 MAIKVGINGFGRIGRSFFRASWGR--EEIEIVAINDLTDAKHLAHLLKYDSVHGIFKGSVEA-KDDSIVVDGKEIKVFAQ 77 (342)
T ss_dssp --CEEEEECCSHHHHHHHHHHTTC--TTCEEEEEECSSCHHHHHHHHHEETTTEECSSCEEE-CSSEEEETTEEEEEECC
T ss_pred CceEEEEECCCHHHHHHHHHHHhC--CCceEEEEecCCChHHHhhhhhcccccccCCCcEEE-cCCEEEECCEEEEEEEc
Confidence 347999999999999999999886 469999999988999999999999999999999997 58899999999999999
Q ss_pred CCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecCCCCCCCC-eEEeecCccccCCCCCceEEcCChhHH
Q 024349 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIP-TYVVGVNEKDYDHEVANIVSNASCTTN 243 (269)
Q Consensus 165 ~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP~k~~Dip-~iV~GVN~~~~~~~~~~IISnaSCTTn 243 (269)
++|++++|+++|+||||||||.|+++++++.|+++||||||||+|++ |+| +||||||++.|++..++||||||||||
T Consensus 78 ~dp~~~~w~~~gvDiV~estG~~~s~e~a~~hl~aGakkVvisaps~--dvp~~vV~gVN~~~~~~~~~~IISNasCTTn 155 (342)
T 2ep7_A 78 KDPSQIPWGDLGVDVVIEATGVFRDRENASKHLQGGAKKVIITAPAK--NPDITVVLGVNEEKYNPKEHNIISNASCTTN 155 (342)
T ss_dssp SSGGGCCHHHHTCSEEEECSSSCCBHHHHTTTGGGTCSEEEESSCCB--SCSEECCTTTSGGGCCTTTCCEEECCCHHHH
T ss_pred CChhhCCccccCCCEEEECCCchhhhhhhHHHHhcCCCEEEecCCCC--CCCceEEcCcCHHHhcccCCeEEECCChHHH
Confidence 99999999999999999999999999999999999999999999986 589 999999999998722789999999999
Q ss_pred hHHHHHHHHhhhcCceEEEEee-ecc
Q 024349 244 CLAPFVKVMDEELGKQSDLLND-HSV 268 (269)
Q Consensus 244 ~LaPvlkvL~d~fGI~~g~vTT-hsv 268 (269)
||+|++|+|||+|||++++||| ||+
T Consensus 156 ~Lap~lk~L~d~fGI~~~~mTTvha~ 181 (342)
T 2ep7_A 156 CLAPCVKVLNEAFGVEKGYMVTVHAY 181 (342)
T ss_dssp HHHHHHHHHHHHHCEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHcCeeEEEEEEEeec
Confidence 9999999999999999999999 986
No 12
>2g82_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; G3PDH, glycolysis, oxidoreductase, NAD, rossmann fold; HET: NAD PGE; 1.65A {Thermus aquaticus} SCOP: c.2.1.3 d.81.1.1 PDB: 1cer_O* 1vc2_A*
Probab=100.00 E-value=8.6e-54 Score=401.97 Aligned_cols=177 Identities=50% Similarity=0.834 Sum_probs=167.3
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEecCC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRD 166 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~~~ 166 (269)
+||||||||||||+++|+|+++ ++++++|||+.++++++|||+|||+||+|.++++. +++.|.+||+.|+++++++
T Consensus 1 ikVgInG~G~IGr~vlr~l~~~---~~evvaind~~~~~~~a~ll~~ds~~G~~~~~v~~-~~~~l~v~g~~i~v~~~~d 76 (331)
T 2g82_O 1 MKVGINGFGRIGRQVFRILHSR---GVEVALINDLTDNKTLAHLLKYDSIYHRFPGEVAY-DDQYLYVDGKAIRATAVKD 76 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH---TCCEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEE-CSSEEEETTEEEEEECCSS
T ss_pred CEEEEECcCHHHHHHHHHHHhC---CCEEEEEecCCCHHHHhHhhhccccCCCCCceEEE-cCCEEEECCEEEEEEecCC
Confidence 4899999999999999999987 58999999999999999999999999999999997 5788999999999999899
Q ss_pred CCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecCCCCCCCCeEEeecCccccCCCCCceEEcCChhHHhHH
Q 024349 167 PLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLA 246 (269)
Q Consensus 167 P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP~k~~Dip~iV~GVN~~~~~~~~~~IISnaSCTTn~La 246 (269)
|++++|++.|+|+||||||.|++++.+++|+++||||||||+|+++ ++|+||||||++.|++..++||||||||||||+
T Consensus 77 p~~l~w~~~gvDiV~estG~~~s~e~a~~~l~aGakkvVIsaps~d-~~p~vV~gVN~~~~~~~~~~IIsnasCtTn~la 155 (331)
T 2g82_O 77 PKEIPWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAPAKG-EDITIVMGVNHEAYDPSRHHIISNASCTTNSLA 155 (331)
T ss_dssp GGGSCTTTTTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBS-CSEECCTTTTGGGCCTTTCCEEECCCHHHHHHH
T ss_pred hhhCcccccCCCEEEECCCchhhHHHHHHHHHCCCCEEEECCCCcC-CCCEEeeccCHHHhCcCCCCEEECCChHHHHHH
Confidence 9999999999999999999999999999999999999999999874 589999999999998621689999999999999
Q ss_pred HHHHHHhhhcCceEEEEee-ecc
Q 024349 247 PFVKVMDEELGKQSDLLND-HSV 268 (269)
Q Consensus 247 PvlkvL~d~fGI~~g~vTT-hsv 268 (269)
|++|+|||+|||++++||| ||+
T Consensus 156 p~lk~L~~~fgI~~~~mtTvha~ 178 (331)
T 2g82_O 156 PVMKVLEEAFGVEKALMTTVHSY 178 (331)
T ss_dssp HHHHHHHHHTCEEEEEEEEEEEC
T ss_pred HHHHHHHHhcCccEEEEEEEeec
Confidence 9999999999999999998 986
No 13
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=100.00 E-value=2.5e-53 Score=405.35 Aligned_cols=182 Identities=56% Similarity=1.007 Sum_probs=169.8
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEec
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~ 164 (269)
|++||||||||||||+++|+|+++..+++++|+||+..++++++|||+|||+||+|.++++. +++.|.+||+.|.++++
T Consensus 1 M~ikVgInGfGrIGr~vlR~l~~~~~~~veIVaInd~~d~~~~a~ll~yds~~G~~~~~v~~-~~~~l~v~g~~i~v~~~ 79 (380)
T 2d2i_A 1 MTIRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNTSDARTAAHLLEYDSVLGRFNADISY-DENSITVNGKTMKIVCD 79 (380)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHCSSCSEEEEEEECSSCHHHHHHHHHCCTTTCCCCSCEEE-ETTEEEETTEEEEEECC
T ss_pred CCcEEEEECcCHHHHHHHHHHhcCCCCCEEEEEEecCCCHHHHHHhhcccccCCCCCCcEEE-eCCeEEECCeEEEEEec
Confidence 34799999999999999999998732469999999999999999999999999999999987 57889999999999999
Q ss_pred CCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecCCCCCCCC-eEEeecCccccCCCCCceEEcCChhHH
Q 024349 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIP-TYVVGVNEKDYDHEVANIVSNASCTTN 243 (269)
Q Consensus 165 ~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP~k~~Dip-~iV~GVN~~~~~~~~~~IISnaSCTTn 243 (269)
+||++++|++.|+|+||||||.|++++.+++|+++|+||||||+|+++ ++| +||||||++.|++..++||||||||||
T Consensus 80 ~dp~~l~w~~~gvDvV~e~TG~f~s~e~a~~hl~aGakkVVIs~ps~d-~~p~~~V~GVN~e~~~~~~~~IVSNasCtTn 158 (380)
T 2d2i_A 80 RNPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKVLITAPGKA-EGVGTYVIGVNDSEYRHEDFAVISNASCTTN 158 (380)
T ss_dssp SCGGGCCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBS-SSCEECCTTTTGGGCCTTTCSEEECCCHHHH
T ss_pred CChHHCCcccCCCCEEEECCCccccHHHHHHHHHcCCcEEEEcCCCCC-CCCceEEcccCHHHhcccCCcEEECCchHHH
Confidence 999999999889999999999999999999999999999999999874 578 999999999998732689999999999
Q ss_pred hHHHHHHHHhhhcCceEEEEee-ecc
Q 024349 244 CLAPFVKVMDEELGKQSDLLND-HSV 268 (269)
Q Consensus 244 ~LaPvlkvL~d~fGI~~g~vTT-hsv 268 (269)
||+|++|+|||+|||++++||| |++
T Consensus 159 ~lap~lk~L~d~fgI~~g~mTTvha~ 184 (380)
T 2d2i_A 159 CLAPVAKVLHDNFGIIKGTMTTTHSY 184 (380)
T ss_dssp HHHHHHHHHHHHHCEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHhcCeeEEEEEEEeec
Confidence 9999999999999999999998 986
No 14
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*
Probab=100.00 E-value=6.5e-53 Score=396.90 Aligned_cols=181 Identities=75% Similarity=1.250 Sum_probs=170.2
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEecC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~~ 165 (269)
++||||||||||||+++|+|+++.++.+++|+|||..++++++|||+|||+||+|.+++...+++.|.+||+.|.+++++
T Consensus 1 ~ikVgInG~G~IGr~llR~l~~~~~p~~eivaInd~~~~~~~a~ll~sds~~G~~~~~v~~~~~~~l~v~g~~i~v~~~~ 80 (337)
T 1rm4_O 1 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDR 80 (337)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCSSCSEEEEEEECTTCHHHHHHHHHCCTTTCSCSSCEEECTTSEEEETTEEEEEECCS
T ss_pred CeEEEEECCCHHHHHHHHHHHhCCCCCeEEEEEEcCCCHHHHHHHhcccccCCCccceeEEecCCeEEECCeEEEEEecC
Confidence 36999999999999999999987556799999999999999999999999999999999833577899999999999999
Q ss_pred CCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecCCCCCCCCeEEeecCccccCCCCCceEEcCChhHHhH
Q 024349 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCL 245 (269)
Q Consensus 166 ~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP~k~~Dip~iV~GVN~~~~~~~~~~IISnaSCTTn~L 245 (269)
||++++|+++|+|+||||||.|++++.+++|+++|+|+|++|+|.++ |+|+||||||++.|++. ++||||||||||||
T Consensus 81 dp~~i~w~~~gvDiV~eatg~~~s~e~a~~~l~~Gak~V~iSap~r~-d~p~~V~GVN~~~~~~~-~~IIsNasCtTn~l 158 (337)
T 1rm4_O 81 NPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGKG-DIPTYVVGVNEEGYTHA-DTIISNASCTTNCL 158 (337)
T ss_dssp CGGGSCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBS-SCCBCCTTTTGGGCCTT-CSEEECCCHHHHHH
T ss_pred ChhhCcccccCCCEEEECCCchhhHHHHHHHHHcCCEEEEECCcccC-CCCeEeecCCHHHhCCC-CeEEECCChHHHHH
Confidence 99999999889999999999999999999999999999999999874 68999999999999865 78999999999999
Q ss_pred HHHHHHHhhhcCceEEEEee-ecc
Q 024349 246 APFVKVMDEELGKQSDLLND-HSV 268 (269)
Q Consensus 246 aPvlkvL~d~fGI~~g~vTT-hsv 268 (269)
+|++|+|||+|||++++||| ||+
T Consensus 159 ap~lk~L~~~fgI~~~~mtTvha~ 182 (337)
T 1rm4_O 159 APFVKVLDQKFGIIKGTMTTTHSY 182 (337)
T ss_dssp HHHHHHHHHHHCEEEEEEEEEEEC
T ss_pred HHHHHHHHHhcCeeEEEEEEEEec
Confidence 99999999999999999988 986
No 15
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=100.00 E-value=2.6e-52 Score=392.78 Aligned_cols=182 Identities=57% Similarity=1.018 Sum_probs=169.9
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEec
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~ 164 (269)
|++||||||||||||.++|+|.++..+++++|+||+..++++++|||+|||+||+|.++++. +++.|.+||+.|.++++
T Consensus 1 M~ikVgI~G~G~IGr~v~r~l~~~~~~~~evvaInd~~~~~~~~~l~~~ds~~G~~~~~v~~-~~~~l~v~g~~i~v~~~ 79 (339)
T 3b1j_A 1 MTIRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNTSDARTAAHLLEYDSVLGRFNADISY-DENSITVNGKTMKIVCD 79 (339)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHCSCCSEEEEEEECSSCHHHHHHHHHCCTTTCCCCSCEEE-ETTEEEETTEEEEEECC
T ss_pred CceEEEEECCCHHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHhccccccCCCCCcEEE-cCCeeeecCceEEEEec
Confidence 35799999999999999999998733569999999999999999999999999999999987 57889999999999999
Q ss_pred CCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecCCCCCCCC-eEEeecCccccCCCCCceEEcCChhHH
Q 024349 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIP-TYVVGVNEKDYDHEVANIVSNASCTTN 243 (269)
Q Consensus 165 ~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP~k~~Dip-~iV~GVN~~~~~~~~~~IISnaSCTTn 243 (269)
+||++++|++.++|+||||||.|.+++.+++|+++|+||||||+|+++ ++| +||||||++.|++..++||||||||||
T Consensus 80 ~dp~~l~w~~~~vDvV~e~tg~~~s~e~a~~~l~~GakkVVId~~~~~-~~p~~~V~gVN~~~~~~~~~~IISnasCtTn 158 (339)
T 3b1j_A 80 RNPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKVLITAPGKG-EGVGTYVIGVNDSEYRHEDFAVISNASCTTN 158 (339)
T ss_dssp SCGGGSCTTTTTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBS-SSCEECCTTTTGGGCCTTTCSEEECCCHHHH
T ss_pred CChHHCcccccCCCEEEECCCccccHHHHHHHHHcCCcEEEEeCCCCC-CCCeeEEcccCHHHhCcCCCeEEECCcchhh
Confidence 999999999899999999999999999999999999999999999873 578 999999999998733689999999999
Q ss_pred hHHHHHHHHhhhcCceEEEEee-ecc
Q 024349 244 CLAPFVKVMDEELGKQSDLLND-HSV 268 (269)
Q Consensus 244 ~LaPvlkvL~d~fGI~~g~vTT-hsv 268 (269)
||+|++|+||++|||++++||| |++
T Consensus 159 ~lap~lk~L~~~fgI~~~~~tTvha~ 184 (339)
T 3b1j_A 159 CLAPVAKVLHDNFGIIKGTMTTTHSY 184 (339)
T ss_dssp HHHHHHHHHHHHTCEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHhCCeeEEEEEEEEee
Confidence 9999999999999999999988 986
No 16
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=100.00 E-value=5.7e-51 Score=383.03 Aligned_cols=179 Identities=49% Similarity=0.821 Sum_probs=167.7
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEecC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~~ 165 (269)
++||||||||||||+++|+|+++ +++++|+||+..++++++|||+|||+||+|.++++. +++.|.++|+.|.+++++
T Consensus 1 mikVgI~G~G~iGr~l~R~l~~~--~~veivain~~~~~~~~~~ll~~ds~~G~~~~~v~~-~~~~l~v~g~~i~v~~~~ 77 (334)
T 3cmc_O 1 AVKVGINGFGRIGRNVFRAALKN--PDIEVVAVNDLTDANTLAHLLKYDSVHGRLDAEVSV-NGNNLVVNGKEIIVKAER 77 (334)
T ss_dssp CEEEEEESCSHHHHHHHHHHTTC--TTEEEEEEECSSCHHHHHHHHHEETTTEECSSCEEE-ETTEEEETTEEEEEECCS
T ss_pred CeEEEEECCCHHHHHHHHHHhCC--CCeEEEEEeCCCCHHHHHHHhccCCcCCCcCceEEE-ccCcEEECCEEEEEEecC
Confidence 37999999999999999999886 469999999988999999999999999999999997 578899999999999889
Q ss_pred CCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecCCCCCCCCeEEeecCccccCCCCCceEEcCChhHHhH
Q 024349 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCL 245 (269)
Q Consensus 166 ~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP~k~~Dip~iV~GVN~~~~~~~~~~IISnaSCTTn~L 245 (269)
+|++++|++.|+|+||||||.|++++.+++|+++|+|||||++|+++ ++|++|||||++.|++..++||||||||||||
T Consensus 78 dp~~i~w~~~~vDvV~~atg~~~s~e~a~~~l~~Gak~vVId~pa~d-~~p~~V~eVN~~~i~~~~~~IIsNpsCttn~l 156 (334)
T 3cmc_O 78 DPENLAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVIISAPAKN-EDITIVMGVNQDKYDPKAHHVISNASCTTNCL 156 (334)
T ss_dssp SGGGCCTGGGTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBS-CSEECCTTTSGGGCCTTTCCEEECCCHHHHHH
T ss_pred ChhhcCcccCccCEEEECCCchhhHHHHHHHHHCCCCEEEEeCCCcc-CCCEeccccCHHHhCccCCeEEECCChHHHHH
Confidence 99999999999999999999999999999999999999999999874 57999999999999862168999999999999
Q ss_pred HHHHHHHhhhcCceEEEEee-ecc
Q 024349 246 APFVKVMDEELGKQSDLLND-HSV 268 (269)
Q Consensus 246 aPvlkvL~d~fGI~~g~vTT-hsv 268 (269)
+|+||+|+++|||++++||| ||+
T Consensus 157 ap~lkpL~~~~gI~~~~mtTvha~ 180 (334)
T 3cmc_O 157 APFAKVLHEQFGIVRGMMTTVHSY 180 (334)
T ss_dssp HHHHHHHHHHHCEEEEEEEEEEEC
T ss_pred HHHHHHHHHhcCceeeeEEEEEec
Confidence 99999999999999999988 985
No 17
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=100.00 E-value=7.4e-51 Score=385.17 Aligned_cols=180 Identities=44% Similarity=0.801 Sum_probs=166.2
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC-CCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEe
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND-SGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd-~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~ 163 (269)
+++||||||||||||+++|+|+++ +++++|+||+ ..++++++|||+|||+||+|.++++. +++.|.+||+.|++++
T Consensus 16 ~~ikVgI~G~G~iGr~llR~l~~~--p~veivaindp~~~~~~~a~ll~~ds~hg~~~~~v~~-~~~~l~v~g~~i~v~~ 92 (354)
T 3cps_A 16 FQGTLGINGFGRIGRLVLRACMER--NDITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVEV-SGKDLCINGKVVKVFQ 92 (354)
T ss_dssp --CEEEEECCSHHHHHHHHHHHTC--SSCEEEEEECTTSCHHHHHHHHHCCTTTCSCSSCEEE-CC-CEEETTEEEEEEC
T ss_pred cceEEEEECCCHHHHHHHHHHHcC--CCeEEEEecCCCCChhHhhhhhcccccCCCCCCcEEE-eCCEEEECCeEEEEEe
Confidence 457999999999999999999987 4699999999 58999999999999999999999987 5788999999999999
Q ss_pred cCCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecCCCCCCCCeEEeecCccccCCCCCceEEcCChhHH
Q 024349 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTN 243 (269)
Q Consensus 164 ~~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP~k~~Dip~iV~GVN~~~~~~~~~~IISnaSCTTn 243 (269)
++||++++|++.++|+||||||.|++++.+++|+++|+||||||+|+++ ++|++|||||++.|++..++||||||||||
T Consensus 93 ~~dp~~i~w~~~~vDvV~eatg~~~s~e~a~~~l~~GakkvVId~padd-~~p~~V~GVN~~~~~~~~~~IISNpsCtTn 171 (354)
T 3cps_A 93 AKDPAEIPWGASGAQIVCESTGVFTTEEKASLHLKGGAKKVIISAPPKD-NVPMYVMGVNNTEYDPSKFNVISNASCTTN 171 (354)
T ss_dssp CSCGGGCCHHHHTCCEEEECSSSCCSHHHHGGGGTTTCSEEEESSCCSS-CCCBCCTTTTGGGCCTTTCSEEECCCHHHH
T ss_pred cCChHHCCcccCCCCEEEECCCchhhHHHHHHHHHcCCcEEEEeCCCCC-CCCEEEeccCHHHhCcCCCcEEECCCcHHH
Confidence 9999999998889999999999999999999999999999999999864 579999999999998632589999999999
Q ss_pred hHHHHHHHHhhhcCceEEEEee-ecc
Q 024349 244 CLAPFVKVMDEELGKQSDLLND-HSV 268 (269)
Q Consensus 244 ~LaPvlkvL~d~fGI~~g~vTT-hsv 268 (269)
||+|+||+|+++|||++++||| ||+
T Consensus 172 ~lap~lkpL~~~~gI~~g~mtTvha~ 197 (354)
T 3cps_A 172 CLAPLAKIINDKFGIVEGLMTTVHSL 197 (354)
T ss_dssp HHHHHHHHHHHHTCEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHhCCeeEEEEEEEecc
Confidence 9999999999999999999988 985
No 18
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=100.00 E-value=1.7e-50 Score=379.06 Aligned_cols=176 Identities=45% Similarity=0.798 Sum_probs=166.8
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEecCC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRD 166 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~~~ 166 (269)
+||||||||||||+++|+|+++ +++++|+||+..++++++|||+|||+||+|.++++. +++.|.+||+.|++++++|
T Consensus 2 ikVgI~G~G~iG~~l~R~l~~~--~~veiv~i~~~~~~~~~a~l~~~ds~~g~~~~~v~~-~~~~l~v~g~~i~v~~~~d 78 (330)
T 1gad_O 2 IKVGINGFGRIGRIVFRAAQKR--SDIEIVAINDLLDADYMAYMLKYDSTHGRFDGTVEV-KDGHLIVNGKKIRVTAERD 78 (330)
T ss_dssp EEEEEECCSHHHHHHHHHHHTC--SSEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEE-ETTEEEETTEEEEEECCSS
T ss_pred eEEEEECcCHHHHHHHHHHHcC--CCeEEEEEcCCCChhHHhHhhcccccCCCCCCeEEE-cCCEEEECCEEEEEEEcCC
Confidence 6999999999999999999986 469999999988999999999999999999999987 5788999999999999999
Q ss_pred CCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecCCCCCCCCeEEeecCccccCCCCCceEEcCChhHHhHH
Q 024349 167 PLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLA 246 (269)
Q Consensus 167 P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP~k~~Dip~iV~GVN~~~~~~~~~~IISnaSCTTn~La 246 (269)
|++++|++.++|+||||||.|.+++.+++|+++|+|+|++|+|.++ |+|++|||||++.|+ . ++||||||||||||+
T Consensus 79 p~~i~w~~~~vDvVf~atg~~~s~e~a~~~l~~GakvVdlSa~~~~-~~p~~V~GvN~~~~~-~-~~iIsNpsCtt~~la 155 (330)
T 1gad_O 79 PANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPSKD-NTPMFVKGANFDKYA-G-QDIVSNASCTTNCLA 155 (330)
T ss_dssp GGGGCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCSS-SCCBCCTTTTGGGCC-S-CSEEECCCHHHHHHH
T ss_pred hhhCccccccCCEEEECCCccccHHHHHHHHHCCCEEEEECCCCCC-CCCeEeecCCHHHhC-C-CCEEEcCChHHHHHH
Confidence 9999998889999999999999999999999999999999999854 689999999999998 4 789999999999999
Q ss_pred HHHHHHhhhcCceEEEEee-ecc
Q 024349 247 PFVKVMDEELGKQSDLLND-HSV 268 (269)
Q Consensus 247 PvlkvL~d~fGI~~g~vTT-hsv 268 (269)
|+||+||++|||++++||| ||+
T Consensus 156 p~lkpL~~~~gI~~~~~ttvha~ 178 (330)
T 1gad_O 156 PLAKVINDNFGIIEGLMTTVHAT 178 (330)
T ss_dssp HHHHHHHHHHCEEEEEEEEEECC
T ss_pred HHHHHHHHhcCeeEEEEEEEEec
Confidence 9999999999999999988 985
No 19
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=3.6e-50 Score=377.31 Aligned_cols=178 Identities=51% Similarity=0.774 Sum_probs=167.0
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEecCC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRD 166 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~~~ 166 (269)
+||||||||||||+++|+|+++..+++++|+||+..++++++|||+|||+||+|.++++. +++.|.++|+.|.+++++|
T Consensus 1 ~kVgI~G~G~iGr~llR~l~~~~~p~~eivain~~~~~~~~~~ll~~ds~~g~~~~~v~~-~~~~l~v~g~~i~v~~~~d 79 (332)
T 1hdg_O 1 ARVAINGFGRIGRLVYRIIYERKNPDIEVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEY-TENSLIVDGKEIKVFAEPD 79 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCTTCEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEE-CSSEEEETTEEEEEECCSS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCCCeEEEEEEcCCChHHhhhhccCcCcCCCcCCcEEE-cCCEEEECCeEEEEEecCC
Confidence 489999999999999999998732469999999988999999999999999999999987 5889999999999998899
Q ss_pred CCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecCCCCCCCC-eEEeecCccccCCCCCceEEcCChhHHhH
Q 024349 167 PLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIP-TYVVGVNEKDYDHEVANIVSNASCTTNCL 245 (269)
Q Consensus 167 P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP~k~~Dip-~iV~GVN~~~~~~~~~~IISnaSCTTn~L 245 (269)
|++++|++.++|+||||||.|++++.+++|+++|+|||||++|++ |+| ++|||||++.|++. ++||||||||||||
T Consensus 80 p~~l~w~~~~vDvV~~atg~~~s~e~a~~~l~aGakkvVId~~a~--d~p~~~V~eVN~~~i~~~-~~iIsNpsCttn~l 156 (332)
T 1hdg_O 80 PSKLPWKDLGVDFVIESTGVFRNREKAELHLQAGAKKVIITAPAK--GEDITVVIGCNEDQLKPE-HTIISCASCTTNSI 156 (332)
T ss_dssp GGGSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCB--SCSEECCTTTTGGGCCTT-CCEEECCCHHHHHH
T ss_pred hHHCcccccCCCEEEECCccchhHHHHHHHHHcCCcEEEEeCCCC--CCCceEEeccCHHHhCCC-CcEEECCccHHHHH
Confidence 999999988999999999999999999999999999999999985 579 99999999999864 68999999999999
Q ss_pred HHHHHHHhhhcCceEEEEee-ecc
Q 024349 246 APFVKVMDEELGKQSDLLND-HSV 268 (269)
Q Consensus 246 aPvlkvL~d~fGI~~g~vTT-hsv 268 (269)
+|+||+|+++|||++++||| ||+
T Consensus 157 ap~lkpL~~~~gI~~~~~ttvha~ 180 (332)
T 1hdg_O 157 APIVKVLHEKFGIVSGMLTTVHSY 180 (332)
T ss_dssp HHHHHHHHHHHCEEEEEEEEEEEC
T ss_pred HHHHHHHHHhcCeeEeEEEEEEec
Confidence 99999999999999999988 985
No 20
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=100.00 E-value=1.4e-49 Score=374.21 Aligned_cols=179 Identities=42% Similarity=0.729 Sum_probs=167.0
Q ss_pred ceeeEEEEcCChHHHHHHHHHHh---CCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEE
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHG---RKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKV 161 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~---r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V 161 (269)
|++||||||||||||+++|+|.+ + +++++|+||+..++++++|||+|||+||+|.++++. +++.|.+||+.|++
T Consensus 1 M~ikVgI~G~G~iGr~l~r~l~~~~~~--~~~eivai~~~~~~~~~~~ll~~ds~~g~~~~~v~~-~~~~l~v~g~~i~v 77 (339)
T 2x5j_O 1 MTVRVAINGFGRIGRNVVRALYESGRR--AEITVVAINELADAAGMAHLLKYDTSHGRFAWEVRQ-ERDQLFVGDDAIRV 77 (339)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTSGG--GTEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEE-ETTEEEETTEEEEE
T ss_pred CCeEEEEECcCHHHHHHHHHHHcCCCC--CCEEEEEEeCCCCHHHHHHHhcccccCCCCCceEEE-cCCeeEECCEEEEE
Confidence 34799999999999999999998 5 469999999988999999999999999999999987 57889999999999
Q ss_pred EecCCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecCCCCCCCC-eEEeecCccccCCCCCceEEcCCh
Q 024349 162 VSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIP-TYVVGVNEKDYDHEVANIVSNASC 240 (269)
Q Consensus 162 ~~~~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP~k~~Dip-~iV~GVN~~~~~~~~~~IISnaSC 240 (269)
++++||++++|++.++|+||||||.|.+++.+++|+++|+|||||++|+. .|+| ++|||||++.|+++ .+|||||||
T Consensus 78 ~~~~dp~~l~~~~~~vDvV~e~tg~~~s~e~a~~~l~~GakkVVId~~ad-~d~p~~~V~gvN~~~~~~~-~~iIsnpsC 155 (339)
T 2x5j_O 78 LHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPGS-NDLDATVVYGVNQDQLRAE-HRIVSNASC 155 (339)
T ss_dssp ECCSSGGGCCHHHHTCSEEEECSSSCCSHHHHHHHHHTTCSEEEESSCCC-TTSSEECCTTTSGGGCCTT-CCEEECCCH
T ss_pred EecCChHHCcccccCCCEEEECCCccccHHHHHHHHHcCCCEEEEecccc-CCCCceeecccCHHHhcCC-CCEEECCCc
Confidence 98899999999888999999999999999999999999999999999983 2678 99999999999875 589999999
Q ss_pred hHHhHHHHHHHHhhhcCceEEEEee-ecc
Q 024349 241 TTNCLAPFVKVMDEELGKQSDLLND-HSV 268 (269)
Q Consensus 241 TTn~LaPvlkvL~d~fGI~~g~vTT-hsv 268 (269)
|||||+|+||+|+++|||++++||| ||+
T Consensus 156 ttn~lap~lkpL~~~~gI~~~~~ttvha~ 184 (339)
T 2x5j_O 156 TTNCIIPVIKLLDDAYGIESGTVTTIHSA 184 (339)
T ss_dssp HHHHHHHHHHHHHHHHCEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHHccCcceeeEEEEEec
Confidence 9999999999999999999999988 985
No 21
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=100.00 E-value=3.7e-49 Score=370.86 Aligned_cols=179 Identities=45% Similarity=0.786 Sum_probs=166.8
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCC-CCcccccccccccccccccC-ceEEEecCCeEEECCEEEEEE
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS-GGVKNASHLLKYDSLLGTFK-ADVKIVDNETISVDGKLIKVV 162 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~-~~~~~~a~LlkyDS~hG~f~-g~v~~~~~~~L~inGk~I~V~ 162 (269)
|++||||||||||||.++|+|.++ +++++|+|||+ .++++++|||+|||+||+|. ++++..+++.|.+||+.|.++
T Consensus 2 m~ikVgI~G~GrIGr~l~R~l~~~--p~vevvaI~d~~~~~~~~~~ll~yds~~g~~~~~~v~~~~~~~l~~~g~~i~v~ 79 (337)
T 3e5r_O 2 GKIKIGINGFGRIGRLVARVALQS--EDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTVF 79 (337)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTC--SSEEEEEEECSSSCHHHHHHHHHCCTTTCCCCSSCEEESSSSEEEETTEEEEEE
T ss_pred CceEEEEECcCHHHHHHHHHHhCC--CCeEEEEEECCCCCHHHHHHhhcccccCCCCCCCcEEeecCCeeEECCeEEEEE
Confidence 447999999999999999999986 46999999995 79999999999999999999 998753467899999999999
Q ss_pred ecCCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecCCCCCCCCeEEeecCccccCCCCCceEEcCChhH
Q 024349 163 SNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTT 242 (269)
Q Consensus 163 ~~~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP~k~~Dip~iV~GVN~~~~~~~~~~IISnaSCTT 242 (269)
+++||++++|.+.++|+||||||.|.+++.+++|+++|+|||||++|++ |.|++|||||++.|++. ++|||||||||
T Consensus 80 ~~~dp~~l~w~~~~vDvV~eaTg~~~~~e~a~~~l~aGak~VVIs~pa~--d~p~~V~gvN~~~~~~~-~~iIsnpsCtt 156 (337)
T 3e5r_O 80 GIRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPSK--DAPMFVCGVNEDKYTSD-IDIVSNASCTT 156 (337)
T ss_dssp CCSCGGGCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCS--SSCBCCTTTTGGGCCTT-CCEEECCCHHH
T ss_pred ecCChHHccccccCCCEEEECCCchhhHHHHHHHHHcCCCEEEEecCCC--CCCEEEeccCHHHhCCC-CcEEECCChHH
Confidence 9999999999888999999999999999999999999999999999985 57999999999999865 78999999999
Q ss_pred HhHHHHHHHHhhhcCceEEEEee-ecc
Q 024349 243 NCLAPFVKVMDEELGKQSDLLND-HSV 268 (269)
Q Consensus 243 n~LaPvlkvL~d~fGI~~g~vTT-hsv 268 (269)
|||+|+||+|+|+|||++++||| ||+
T Consensus 157 ~~la~~lkpL~~~~gI~~~~~ttvha~ 183 (337)
T 3e5r_O 157 NCLAPLAKVIHDNFGIIEGLMTTVHAI 183 (337)
T ss_dssp HHHHHHHHHHHHHHCEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHhcCccccceeEEEee
Confidence 99999999999999999999988 986
No 22
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=100.00 E-value=5.8e-49 Score=368.72 Aligned_cols=178 Identities=42% Similarity=0.783 Sum_probs=166.7
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCC-CCcccccccccccccccccCceEEEecCCeEEECCEEEEEEe
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS-GGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~-~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~ 163 (269)
|++||||||||||||.++|+|.++ +++++|+|+|+ .++++++||++|||+||+|.++++. +++.|.+||+.|++++
T Consensus 2 M~ikVgI~G~G~iGr~~~R~l~~~--~~vevvaI~d~~~~~~~~a~l~~~ds~~g~~~~~~~~-~~~~l~v~g~~i~v~~ 78 (335)
T 1u8f_O 2 GKVKVGVNGFGRIGRLVTRAAFNS--GKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKA-ENGKLVINGNPITIFQ 78 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHH--CSSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEE-ETTEEEETTEEEEEEC
T ss_pred CceEEEEEccCHHHHHHHHHHHcC--CCcEEEEecCCCCCHHHHHHHhhcccccCCCCCceEE-cCCeEEECCeEEEEEe
Confidence 457999999999999999999886 46999999995 8999999999999999999999987 5788999999999999
Q ss_pred cCCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecCCCCCCCCeEEeecCccccCCCCCceEEcCChhHH
Q 024349 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTN 243 (269)
Q Consensus 164 ~~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP~k~~Dip~iV~GVN~~~~~~~~~~IISnaSCTTn 243 (269)
++||++++|++.++|+||||||.|.+++.+++|+++|+|+|++|+|.+ |.|++|||||++.|++. ++||||||||||
T Consensus 79 ~~d~~~l~~~~~~vDvV~eatg~~~~~e~a~~~l~aGak~V~iSap~~--~~p~~V~gvN~~~~~~~-~~iIsnpsCtt~ 155 (335)
T 1u8f_O 79 ERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPSA--DAPMFVMGVNHEKYDNS-LKIISNASCTTN 155 (335)
T ss_dssp CSSGGGCCTTTTTCCEEEECSSSCCSHHHHGGGGGGTCSEEEESSCCS--SSCBCCTTTTGGGCCTT-CSEEECCCHHHH
T ss_pred cCCHHHCccccCCCCEEEECCCchhhHHHHHHHHhCCCeEEEeccCCC--CCCeEEeccCHHHhCCC-CCEEECCChHHH
Confidence 999999999989999999999999999999999999999999999964 58999999999999864 689999999999
Q ss_pred hHHHHHHHHhhhcCceEEEEee-ecc
Q 024349 244 CLAPFVKVMDEELGKQSDLLND-HSV 268 (269)
Q Consensus 244 ~LaPvlkvL~d~fGI~~g~vTT-hsv 268 (269)
||+|+||+|+++|||++++||| |++
T Consensus 156 ~l~~~lkpL~~~~gI~~~~~tt~~a~ 181 (335)
T 1u8f_O 156 CLAPLAKVIHDNFGIVEGLMTTVHAI 181 (335)
T ss_dssp HHHHHHHHHHHHHCEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHhCCcceeEEEEEecc
Confidence 9999999999999999999998 986
No 23
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=4.2e-41 Score=316.64 Aligned_cols=165 Identities=18% Similarity=0.219 Sum_probs=143.8
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCCCCccccccccccc--cccccc--CceE-EEecCCeEEECCEEE
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYD--SLLGTF--KADV-KIVDNETISVDGKLI 159 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyD--S~hG~f--~g~v-~~~~~~~L~inGk~I 159 (269)
|++||||||||||||.++|+|.++ +++++|+|+|. ++++++|||+|| |+||+| ++++ +. +++.|.++|
T Consensus 1 MmikVgI~G~G~IGr~v~r~l~~~--~~~evvaV~d~-~~~~~~~l~~~dg~s~~g~~~~~~~v~~~-~~~~l~v~~--- 73 (343)
T 2yyy_A 1 MPAKVLINGYGSIGKRVADAVSMQ--DDMEVIGVTKT-KPDFEARLAVEKGYKLFVAIPDNERVKLF-EDAGIPVEG--- 73 (343)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHS--SSEEEEEEEES-SCSHHHHHHHHTTCCEEESSCCHHHHHHH-HHTTCCCCC---
T ss_pred CceEEEEECCCHHHHHHHHHHHhC--CCceEEEEecC-CHHHHHHHHHhcCCccccccCCCceeecc-cCCeEEECC---
Confidence 357999999999999999999886 35999999998 599999999999 999999 6665 33 455677776
Q ss_pred EEEecCCCCCCCCCCCCccEEEEcCCCCCChhhHH-HHHHcCCCEEEEecCCCCCCCC-eEEeecCccccCCCCCceEEc
Q 024349 160 KVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAG-KHIQAGAKKVIITAPAKGADIP-TYVVGVNEKDYDHEVANIVSN 237 (269)
Q Consensus 160 ~V~~~~~P~~i~w~~~gvDiVve~TG~f~~~e~a~-~Hl~aGakkVIISAP~k~~Dip-~iV~GVN~~~~~~~~~~IISn 237 (269)
+++++.| ++|+|+||||.+.+.+.++ .|+++| ++||+|+|++++++| +||||||++.|++ .+||||
T Consensus 74 ------~~~~~~~---~vDiV~eatg~~~s~~~a~~~~l~aG-~~VI~sap~~~d~vp~~vV~gvN~~~~~~--~~iIsn 141 (343)
T 2yyy_A 74 ------TILDIIE---DADIVVDGAPKKIGKQNLENIYKPHK-VKAILQGGEKAKDVEDNFNALWSYNRCYG--KDYVRV 141 (343)
T ss_dssp ------BGGGTGG---GCSEEEECCCTTHHHHHHHHTTTTTT-CEEEECTTSCGGGSSEEECTTTTHHHHTT--CSEEEE
T ss_pred ------chHHhcc---CCCEEEECCCccccHHHHHHHHHHCC-CEEEECCCccccCCCceEEcccCHHHhcc--CCEEec
Confidence 3555556 8999999999999999996 999999 569999998742389 9999999999985 589999
Q ss_pred CChhHHhHHHHHHHHhhhcCceEEEEee-ecc
Q 024349 238 ASCTTNCLAPFVKVMDEELGKQSDLLND-HSV 268 (269)
Q Consensus 238 aSCTTn~LaPvlkvL~d~fGI~~g~vTT-hsv 268 (269)
||||||||+|+||+|||+|||++++||| |++
T Consensus 142 ~sCtT~~lap~lk~L~~~fgI~~~~vtT~~a~ 173 (343)
T 2yyy_A 142 VSCNTTGLCRILYAINSIADIKKARIVLVRRA 173 (343)
T ss_dssp CCHHHHHHHHHHHHHHTTSEEEEEEEEEEEES
T ss_pred cchhhHHHHHHHHHHHHHcCceEEEEEeeeec
Confidence 9999999999999999999999999999 986
No 24
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=99.97 E-value=1.6e-32 Score=257.01 Aligned_cols=163 Identities=18% Similarity=0.180 Sum_probs=136.6
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCCCCccccccccccc--ccccccCceE-EEecCCeEEECCEEEEEE
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYD--SLLGTFKADV-KIVDNETISVDGKLIKVV 162 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyD--S~hG~f~g~v-~~~~~~~L~inGk~I~V~ 162 (269)
++||||+|+|+|||.++|+|.++ +++++++|++. +++..+++++|| ++||.|.+.+ .. ++..+.+++.
T Consensus 1 mikVgIiGaG~iG~~l~r~L~~~--~~~elvav~d~-~~~~~~~~~~~~g~~~~~~~~~~v~~~-~~~~l~v~~~----- 71 (337)
T 1cf2_P 1 MKAVAINGYGTVGKRVADAIAQQ--DDMKVIGVSKT-RPDFEARMALKKGYDLYVAIPERVKLF-EKAGIEVAGT----- 71 (337)
T ss_dssp CEEEEEECCSTTHHHHHHHHHTS--SSEEEEEEEES-SCSHHHHHHHHTTCCEEESSGGGHHHH-HHTTCCCCEE-----
T ss_pred CeEEEEEeECHHHHHHHHHHHcC--CCcEEEEEEcC-ChhHHHHhcCCcchhhccccccceeee-cCCceEEcCC-----
Confidence 36999999999999999999875 45999999997 577888899888 8999998765 22 2334555542
Q ss_pred ecCCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecCCCCCCC--CeEEeecCccccCCCCCceEEcCCh
Q 024349 163 SNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADI--PTYVVGVNEKDYDHEVANIVSNASC 240 (269)
Q Consensus 163 ~~~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP~k~~Di--p~iV~GVN~~~~~~~~~~IISnaSC 240 (269)
++++.| ++|+||+|||.+.+++.++.|+++|+ +||+++|.++ |. |++|||||++.|++ .+|||||||
T Consensus 72 ----~~~~~~---~vDvV~~atp~~~~~~~a~~~l~aG~-~VId~sp~~~-d~~~~~~V~gvN~e~~~~--~~iIanp~C 140 (337)
T 1cf2_P 72 ----VDDMLD---EADIVIDCTPEGIGAKNLKMYKEKGI-KAIFQGGEKH-EDIGLSFNSLSNYEESYG--KDYTRVVSC 140 (337)
T ss_dssp ----HHHHHH---TCSEEEECCSTTHHHHHHHHHHHHTC-CEEECTTSCH-HHHSCEECHHHHGGGGTT--CSEEEECCH
T ss_pred ----HHHHhc---CCCEEEECCCchhhHHHHHHHHHcCC-EEEEecCCCC-ccCCCeEEeeeCHHHhcC--CCEEEcCCc
Confidence 222223 79999999999999999999999996 4888888742 54 99999999999985 589999999
Q ss_pred hHHhHHHHHHHHhhhcCceEEEEee-ecc
Q 024349 241 TTNCLAPFVKVMDEELGKQSDLLND-HSV 268 (269)
Q Consensus 241 TTn~LaPvlkvL~d~fGI~~g~vTT-hsv 268 (269)
|||||+|+||+|+++|||+++.||| |++
T Consensus 141 ~tt~l~~~l~pL~~~~gI~~~~vtt~~a~ 169 (337)
T 1cf2_P 141 NTTGLCRTLKPLHDSFGIKKVRAVIVRRG 169 (337)
T ss_dssp HHHHHHHHHHHHHHHHCEEEEEEEEEEES
T ss_pred HHHHHHHHHHHHHHhcCcceeEEEEEEEe
Confidence 9999999999999999999999988 974
No 25
>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}
Probab=99.96 E-value=7e-30 Score=238.65 Aligned_cols=151 Identities=21% Similarity=0.272 Sum_probs=123.3
Q ss_pred eeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEecC
Q 024349 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (269)
Q Consensus 87 ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~~ 165 (269)
+||+|+| ||+|||.++|+|.++..+.++ + +++. |. +. +++.+.++|+.+.+...
T Consensus 1 mkVaI~GAtG~iG~~llr~L~~~~~~~~~---l----------~~~~--s~--------~~-~g~~l~~~g~~i~v~~~- 55 (331)
T 2yv3_A 1 MRVAVVGATGAVGREILKVLEARNFPLSE---L----------RLYA--SP--------RS-AGVRLAFRGEEIPVEPL- 55 (331)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSC---C----------EEEE--CG--------GG-SSCEEEETTEEEEEEEC-
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEE---E----------EEee--cc--------cc-CCCEEEEcCceEEEEeC-
Confidence 4899999 999999999999976422122 1 2332 10 11 46778899999999876
Q ss_pred CCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecC-CCCCCCCeEEeecCccccCCCCCceEEcCChhHHh
Q 024349 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP-AKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNC 244 (269)
Q Consensus 166 ~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP-~k~~Dip~iV~GVN~~~~~~~~~~IISnaSCTTn~ 244 (269)
+|+ +| ++|+||+|+|.+.+++.++.|+++|++.|.+|++ ++++|.|++|+|||++.|+.. .+|||||||||||
T Consensus 56 ~~~--~~---~~DvV~~a~g~~~s~~~a~~~~~~G~~vId~s~~~R~~~~~~~~vpevN~~~i~~~-~~iIanp~C~tt~ 129 (331)
T 2yv3_A 56 PEG--PL---PVDLVLASAGGGISRAKALVWAEGGALVVDNSSAWRYEPWVPLVVPEVNREKIFQH-RGIIANPNCTTAI 129 (331)
T ss_dssp CSS--CC---CCSEEEECSHHHHHHHHHHHHHHTTCEEEECSSSSTTCTTSCBCCTTSCGGGGGGC-SSEEECCCHHHHH
T ss_pred Chh--hc---CCCEEEECCCccchHHHHHHHHHCCCEEEECCCccccCCCCCEEEcCcCHHHhcCC-CCEEECCCHHHHH
Confidence 565 68 8999999999999999999999999955444554 345578999999999999864 5799999999999
Q ss_pred HHHHHHHHhhhcCceEEEEee-ecc
Q 024349 245 LAPFVKVMDEELGKQSDLLND-HSV 268 (269)
Q Consensus 245 LaPvlkvL~d~fGI~~g~vTT-hsv 268 (269)
++|+||+|+++|||++++||| |++
T Consensus 130 ~~~~l~pL~~~~~I~~~~vtt~~~~ 154 (331)
T 2yv3_A 130 LAMALWPLHRAFQAKRVIVATYQAA 154 (331)
T ss_dssp HHHHHHHHHHHHCEEEEEEEEEBCG
T ss_pred HHHHHHHHHHhCCceEEEEEEEeec
Confidence 999999999999999999998 985
No 26
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=99.96 E-value=2e-30 Score=243.17 Aligned_cols=153 Identities=14% Similarity=0.162 Sum_probs=124.1
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEecCC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRD 166 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~~~ 166 (269)
+||||+|+|+|||.++|+|.++ +++++++|+|. ++++.+++++|+- +.++..++
T Consensus 2 ikVgIiGaG~iG~~~~r~L~~~--p~~elvav~d~-~~~~~~~~a~~~g-----------------------~~~~~~~~ 55 (340)
T 1b7g_O 2 VNVAVNGYGTIGKRVADAIIKQ--PDMKLVGVAKT-SPNYEAFIAHRRG-----------------------IRIYVPQQ 55 (340)
T ss_dssp EEEEEECCSHHHHHHHHHHHTC--TTEEEEEEECS-SCSHHHHHHHHTT-----------------------CCEECCGG
T ss_pred eEEEEEecCHHHHHHHHHHHcC--CCCEEEEEEcC-ChHHHHHHHHhcC-----------------------cceecCcC
Confidence 6999999999999999999876 46999999997 5777777776531 11222223
Q ss_pred CCCCCCCC-------------CCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecCCCCCCCCeEEeecCccccCCCCCc
Q 024349 167 PLQLPWAE-------------LGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVAN 233 (269)
Q Consensus 167 P~~i~w~~-------------~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP~k~~Dip~iV~GVN~~~~~~~~~~ 233 (269)
|+++ |.+ .++|+||+|||.+.+++.++.|+++|+|+|.+|+|.++...++||+|+|++.+.+ .+
T Consensus 56 ~~~~-~~~~~v~v~~~~e~l~~~vDvV~~aTp~~~s~~~a~~~~~aG~kvV~~sa~~~~~~~~~~v~~vN~~~~~~--~~ 132 (340)
T 1b7g_O 56 SIKK-FEESGIPVAGTVEDLIKTSDIVVDTTPNGVGAQYKPIYLQLQRNAIFQGGEKAEVADISFSALCNYNEALG--KK 132 (340)
T ss_dssp GHHH-HHTTTCCCCCCHHHHHHHCSEEEECCSTTHHHHHHHHHHHTTCEEEECTTSCGGGSSCEECHHHHHHHHTT--CS
T ss_pred HHHH-hcccccccccCHhHhhcCCCEEEECCCCchhHHHHHHHHHcCCeEEEeCCCCCCCCCCEEEcCcchHHHcC--CC
Confidence 3332 331 1689999999999999999999999999998999865433479999999776654 35
Q ss_pred eEEcCChhHHhHHHHHHHHhhhcCceEEEEee-ecc
Q 024349 234 IVSNASCTTNCLAPFVKVMDEELGKQSDLLND-HSV 268 (269)
Q Consensus 234 IISnaSCTTn~LaPvlkvL~d~fGI~~g~vTT-hsv 268 (269)
+|+|||||||||+|+||+|+++|||++++||| |+.
T Consensus 133 iIsnpsCtt~~l~~~lk~L~~~~gI~~~~~tt~~~~ 168 (340)
T 1b7g_O 133 YIRVVSCNTTALLRTICTVNKVSKVEKVRATIVRRA 168 (340)
T ss_dssp EEEECCHHHHHHHHHHHHHHTTSCEEEEEEEEEEES
T ss_pred CcccCCcHHHHHHHHHHHHHHhCCeEEEEEEEEecc
Confidence 99999999999999999999999999999999 964
No 27
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=99.96 E-value=6.1e-29 Score=232.55 Aligned_cols=154 Identities=23% Similarity=0.320 Sum_probs=126.5
Q ss_pred eeeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEec
Q 024349 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (269)
Q Consensus 86 ~ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~ 164 (269)
++||+|+| ||+|||.++|+|.++.++.++++++++.. + .+..+.++|+.+.+. +
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~------------~------------~G~~~~~~~~~i~~~-~ 57 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASER------------S------------EGKTYRFNGKTVRVQ-N 57 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTT------------T------------TTCEEEETTEEEEEE-E
T ss_pred ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCC------------C------------CCCceeecCceeEEe-c
Confidence 47999999 99999999999998754568999888531 0 123445777777774 3
Q ss_pred CCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecC-CCCCCCCeEEeecCccccCCCC-CceEEcCChhH
Q 024349 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP-AKGADIPTYVVGVNEKDYDHEV-ANIVSNASCTT 242 (269)
Q Consensus 165 ~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP-~k~~Dip~iV~GVN~~~~~~~~-~~IISnaSCTT 242 (269)
.+|+ +|. ++|+||+|+|.+.+++.++.|+++|++.|.+|++ ++++++|++|+|||++.|+..+ .+|||||||||
T Consensus 58 ~~~~--~~~--~vDvVf~a~g~~~s~~~a~~~~~~G~~vId~s~~~R~~~~~~~~vpevN~~~i~~~~~~~iIanp~C~t 133 (336)
T 2r00_A 58 VEEF--DWS--QVHIALFSAGGELSAKWAPIAAEAGVVVIDNTSHFRYDYDIPLVVPEVNPEAIAEFRNRNIIANPNCST 133 (336)
T ss_dssp GGGC--CGG--GCSEEEECSCHHHHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCTTTCGGGGGGGGGTTEEECCCHHH
T ss_pred CChH--Hhc--CCCEEEECCCchHHHHHHHHHHHcCCEEEEcCCccccCCCCCeEeccCCHHHhccccCCcEEECCChHH
Confidence 4454 784 8999999999999999999999999965555665 3455789999999999998521 46999999999
Q ss_pred HhHHHHHHHHhhhcCceEEEEee-ecc
Q 024349 243 NCLAPFVKVMDEELGKQSDLLND-HSV 268 (269)
Q Consensus 243 n~LaPvlkvL~d~fGI~~g~vTT-hsv 268 (269)
||++|+|++|+++|||++++||| |++
T Consensus 134 t~~~~~l~pL~~~~~i~~~~vtt~~~~ 160 (336)
T 2r00_A 134 IQMLVALKPIYDAVGIERINVTTYQSV 160 (336)
T ss_dssp HHHHHHHHHHHHHHCEEEEEEEEEEES
T ss_pred HHHHHHHHHHHHhCCccEEEEEEEEec
Confidence 99999999999999999999998 976
No 28
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=99.96 E-value=5.5e-30 Score=238.65 Aligned_cols=163 Identities=19% Similarity=0.204 Sum_probs=135.2
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCCCCccccccccccc--ccccccCceEEEecCCeEEECCEEEEEE
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYD--SLLGTFKADVKIVDNETISVDGKLIKVV 162 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyD--S~hG~f~g~v~~~~~~~L~inGk~I~V~ 162 (269)
|++||||+|||+|||.++|+|.++ +++++++|+|. +.++++++++|| ++||+|.+.+...+++.+.+.+
T Consensus 1 M~irVgIiG~G~iG~~~~r~l~~~--~~~elvav~d~-~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~v~~------ 71 (334)
T 2czc_A 1 MKVKVGVNGYGTIGKRVAYAVTKQ--DDMELIGITKT-KPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAG------ 71 (334)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTC--TTEEEEEEEES-SCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSC------
T ss_pred CCcEEEEEeEhHHHHHHHHHHhcC--CCCEEEEEEcC-CHHHHHHHHHhcCccccccccccceeccCCceEEcC------
Confidence 357999999999999999999876 46899999997 688888999988 8999998775211222233332
Q ss_pred ecCCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecCCCCCC-C-CeEEeecCccccCCCCCceEEcCCh
Q 024349 163 SNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGAD-I-PTYVVGVNEKDYDHEVANIVSNASC 240 (269)
Q Consensus 163 ~~~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP~k~~D-i-p~iV~GVN~~~~~~~~~~IISnaSC 240 (269)
+++++.| ++|+|++|||.+...+.+..|+++| |+||+++|.+. | . |++|+|||++.|+. .++|+|+||
T Consensus 72 ---d~~~l~~---~vDvV~~aTp~~~h~~~a~~~l~aG-k~Vi~sap~~~-d~~~~~~v~~vn~~~~~~--~~ii~~~~C 141 (334)
T 2czc_A 72 ---TLNDLLE---KVDIIVDATPGGIGAKNKPLYEKAG-VKAIFQGGEKA-DVAEVSFVAQANYEAALG--KNYVRVVSC 141 (334)
T ss_dssp ---BHHHHHT---TCSEEEECCSTTHHHHHHHHHHHHT-CEEEECTTSCG-GGSSEEECHHHHGGGGTT--CSEEEECCH
T ss_pred ---cHHHhcc---CCCEEEECCCccccHHHHHHHHHcC-CceEeeccccc-ccccceEEeccCHHHHhh--CCcEEecCc
Confidence 3444444 7999999999999999999999999 57999999753 5 4 69999999999975 579999999
Q ss_pred hHHhHHHHHHHHhhhcCceEEEEee-ecc
Q 024349 241 TTNCLAPFVKVMDEELGKQSDLLND-HSV 268 (269)
Q Consensus 241 TTn~LaPvlkvL~d~fGI~~g~vTT-hsv 268 (269)
|||||+|++|+|++. |+++.||| |++
T Consensus 142 ~t~~l~P~~~~l~~~--I~~g~i~ti~a~ 168 (334)
T 2czc_A 142 NTTGLVRTLSAIREY--ADYVYAVMIRRA 168 (334)
T ss_dssp HHHHHHHHHHHHGGG--EEEEEEEEEEES
T ss_pred HHHHHHHHHHHHHHH--hccccEEEEEEe
Confidence 999999999999997 99999988 986
No 29
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=99.96 E-value=8.9e-29 Score=231.78 Aligned_cols=155 Identities=15% Similarity=0.205 Sum_probs=128.2
Q ss_pred ceeeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEe
Q 024349 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (269)
Q Consensus 85 ~~ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~ 163 (269)
|++||+|+| ||+|||.++|.|.++..+.++++++++. +. .+..+.++|+.+.+..
T Consensus 5 m~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~-------------~~-----------~g~~~~~~g~~i~~~~ 60 (340)
T 2hjs_A 5 QPLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASA-------------ES-----------AGQRMGFAESSLRVGD 60 (340)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECT-------------TT-----------TTCEEEETTEEEECEE
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecC-------------CC-----------CCCccccCCcceEEec
Confidence 347999999 9999999999999775566888888753 11 1233447777777653
Q ss_pred cCCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecCCCCCCCCeEEeecCccccCCCCC-ceEEcCChhH
Q 024349 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVA-NIVSNASCTT 242 (269)
Q Consensus 164 ~~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP~k~~Dip~iV~GVN~~~~~~~~~-~IISnaSCTT 242 (269)
.+|+. |. ++|+||+|+|.+.+++.++.|+++|+|+|.+|++..++++|++|++||++.|+..++ +|||||||||
T Consensus 61 -~~~~~--~~--~~DvV~~a~g~~~s~~~a~~~~~aG~kvId~Sa~~rd~~~~~~vpevN~~~i~~~~~~~iIanp~C~t 135 (340)
T 2hjs_A 61 -VDSFD--FS--SVGLAFFAAAAEVSRAHAERARAAGCSVIDLSGALEPSVAPPVMVSVNAERLASQAAPFLLSSPCAVA 135 (340)
T ss_dssp -GGGCC--GG--GCSEEEECSCHHHHHHHHHHHHHTTCEEEETTCTTTTTTSCBCCHHHHGGGGGGSCSSCEEECCCHHH
T ss_pred -CCHHH--hc--CCCEEEEcCCcHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCeEEcCcCHHHHhcCcCCCEEEcCCHHH
Confidence 34543 75 899999999999999999999999998877898865667899999999999986312 7999999999
Q ss_pred HhHHHHHHHHhhhcCceEEEEee-ecc
Q 024349 243 NCLAPFVKVMDEELGKQSDLLND-HSV 268 (269)
Q Consensus 243 n~LaPvlkvL~d~fGI~~g~vTT-hsv 268 (269)
||++|+|++|+++|||++++||| |++
T Consensus 136 t~~~~~l~pL~~~~~i~~~~v~t~~~~ 162 (340)
T 2hjs_A 136 AELCEVLAPLLATLDCRQLNLTACLSV 162 (340)
T ss_dssp HHHHHHHHHHTTTCCEEEEEEEEEECG
T ss_pred HHHHHHHHHHHHhcCcceEEEEEeccc
Confidence 99999999999999999999998 986
No 30
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=99.94 E-value=9.2e-29 Score=234.40 Aligned_cols=154 Identities=15% Similarity=0.102 Sum_probs=124.8
Q ss_pred eeEEEEc-CChHHHHHHH-HHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEec
Q 024349 87 LKVAING-FGRIGRNFLR-CWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (269)
Q Consensus 87 ikVaInG-fGrIGR~llR-~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~ 164 (269)
+||||+| ||+||+.++| +|.++ +++++.| ++|.||| +|+ .+. .++|+.+.+...
T Consensus 2 ~kVaIvGAtG~vG~~llr~ll~~~---~~~~v~i----------~~~~~~s-~G~---~v~-------~~~g~~i~~~~~ 57 (367)
T 1t4b_A 2 QNVGFIGWRGMVGSVLMQRMVEER---DFDAIRP----------VFFSTSQ-LGQ---AAP-------SFGGTTGTLQDA 57 (367)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT---GGGGSEE----------EEEESSS-TTS---BCC-------GGGTCCCBCEET
T ss_pred cEEEEECCCCHHHHHHHHHHHhcC---CCCeEEE----------EEEEeCC-CCC---Ccc-------ccCCCceEEEec
Confidence 6999999 9999999999 55544 2443333 6788886 776 221 144566777765
Q ss_pred CCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecCC---CCCCCCeEEeecCccccCCC--CC-ceEEcC
Q 024349 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA---KGADIPTYVVGVNEKDYDHE--VA-NIVSNA 238 (269)
Q Consensus 165 ~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP~---k~~Dip~iV~GVN~~~~~~~--~~-~IISna 238 (269)
.+|++ |. ++|+||+|+|.+.+++.++.|+++|+|++||++++ +++|.|++|+|||++.|+.. +. ++|+||
T Consensus 58 ~~~~~--~~--~~DvVf~a~g~~~s~~~a~~~~~~G~k~vVID~ss~~R~~~~~~~~vpevN~~~i~~~~~~g~~~Ianp 133 (367)
T 1t4b_A 58 FDLEA--LK--ALDIIVTCQGGDYTNEIYPKLRESGWQGYWIDAASSLRMKDDAIIILDPVNQDVITDGLNNGIRTFVGG 133 (367)
T ss_dssp TCHHH--HH--TCSEEEECSCHHHHHHHHHHHHHTTCCCEEEECSSTTTTCTTEEEECHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CChHH--hc--CCCEEEECCCchhHHHHHHHHHHCCCCEEEEcCChhhccCCCCcEEeCCcCHHHHhhhhhcCCCEEEeC
Confidence 55554 74 89999999999999999999999999989998876 35578999999999998741 11 699999
Q ss_pred ChhHHhHHHHHHHHhhhcCceEEEEee-ecc
Q 024349 239 SCTTNCLAPFVKVMDEELGKQSDLLND-HSV 268 (269)
Q Consensus 239 SCTTn~LaPvlkvL~d~fGI~~g~vTT-hsv 268 (269)
||||+|++|+|++|+++|+|+++.||| |++
T Consensus 134 ~Cttt~~~~al~pL~~~~~I~~~~vtt~~a~ 164 (367)
T 1t4b_A 134 NCTVSLMLMSLGGLFANDLVDWVSVATYQAA 164 (367)
T ss_dssp CHHHHHHHHHHHHHHHTTCEEEEEEEEEBCG
T ss_pred CHHHHHHHHHHHHHHHcCCCcEEEEEEEecc
Confidence 999999999999999999999999998 986
No 31
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=99.92 E-value=3.6e-26 Score=214.49 Aligned_cols=163 Identities=17% Similarity=0.231 Sum_probs=125.1
Q ss_pred eeeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEec
Q 024349 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (269)
Q Consensus 86 ~ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~ 164 (269)
++||+|+| ||+||+.++|+|.++ +.+++++|++. + .. .--+||++|+.+. ++.+.++++.+.+ .+
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~--p~~elvai~~s-~-~~--~g~~~~~~~~~~~-------~~~~~~~~~~~~~-~~ 69 (350)
T 2ep5_A 4 KIKVSLLGSTGMVGQKMVKMLAKH--PYLELVKVSAS-P-SK--IGKKYKDAVKWIE-------QGDIPEEVQDLPI-VS 69 (350)
T ss_dssp CEEEEEESCSSHHHHHHHHHHTTC--SSEEEEEEECC-G-GG--TTSBHHHHCCCCS-------SSSCCHHHHTCBE-EC
T ss_pred CcEEEEECcCCHHHHHHHHHHHhC--CCcEEEEEecC-h-hh--cCCCHHHhcCccc-------ccccccCCceeEE-ee
Confidence 57999999 999999999999876 46899999742 0 00 0123788887653 1122233334444 33
Q ss_pred CCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecCC---CCCCCCeEEeecCccccCCC---------CC
Q 024349 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA---KGADIPTYVVGVNEKDYDHE---------VA 232 (269)
Q Consensus 165 ~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP~---k~~Dip~iV~GVN~~~~~~~---------~~ 232 (269)
.+|+. |. ++|+||+|||.+.+++.++.|+++|++ ||+.++ +++|.|++|+|||++.|... +.
T Consensus 70 ~d~~~--~~--~vDvVf~atp~~~s~~~a~~~~~aG~~--VId~s~~~R~~~~~~~~vpevn~~~~~~~e~~r~~~~~~~ 143 (350)
T 2ep5_A 70 TNYED--HK--DVDVVLSALPNELAESIELELVKNGKI--VVSNASPFRMDPDVPLINPEINWEHLELLKFQKERKGWKG 143 (350)
T ss_dssp SSGGG--GT--TCSEEEECCCHHHHHHHHHHHHHTTCE--EEECSSTTTTCTTSCBCCHHHHGGGGGGHHHHHHHHTCSS
T ss_pred CCHHH--hc--CCCEEEECCChHHHHHHHHHHHHCCCE--EEECCccccCCCCCCeeCCccCHHHhcChHhhhhhcccCc
Confidence 35543 53 899999999999999999999999995 565554 34578999999999988620 14
Q ss_pred ceEEcCChhHHhHHHHHHHHhhhcCceEEEEee-ecc
Q 024349 233 NIVSNASCTTNCLAPFVKVMDEELGKQSDLLND-HSV 268 (269)
Q Consensus 233 ~IISnaSCTTn~LaPvlkvL~d~fGI~~g~vTT-hsv 268 (269)
+|||||+|+|||++|+|++|+++|||++++||| |++
T Consensus 144 ~iIanpgC~tt~~~l~l~pL~~~~gi~~i~v~t~~~~ 180 (350)
T 2ep5_A 144 ILVKNPNCTAAIMSMPIKPLIEIATKSKIIITTLQAV 180 (350)
T ss_dssp EEEECCCHHHHHHHHHHGGGHHHHHTSEEEEEEEECG
T ss_pred eEEEcCchHHHHHHHHHHHHHHhcCCcEEEEEEEEec
Confidence 699999999999999999999999999999998 985
No 32
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=99.92 E-value=1e-24 Score=206.97 Aligned_cols=154 Identities=17% Similarity=0.258 Sum_probs=122.8
Q ss_pred ceeeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEe
Q 024349 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (269)
Q Consensus 85 ~~ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~ 163 (269)
|++||+|.| +|.+|+.++|+|.+++.+.++++.+... + + +++.+.+.|+.+.+..
T Consensus 1 m~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~-------------~---------s--aG~~~~~~~~~~~~~~ 56 (366)
T 3pwk_A 1 MGYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASA-------------R---------S--AGKSLKFKDQDITIEE 56 (366)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECT-------------T---------T--TTCEEEETTEEEEEEE
T ss_pred CCcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEcc-------------c---------c--CCCcceecCCCceEee
Confidence 468999999 9999999999998874333443333211 0 1 4566667887776643
Q ss_pred cCCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecC-CCCCCCCeEEeecCccccCCCCCceEEcCChhH
Q 024349 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP-AKGADIPTYVVGVNEKDYDHEVANIVSNASCTT 242 (269)
Q Consensus 164 ~~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP-~k~~Dip~iV~GVN~~~~~~~~~~IISnaSCTT 242 (269)
-+++ .|. ++|+||+|+|.+.+++.++.|+++|++.|.+|++ ++++|.|++|+|||++.|+.. .+|||||+|+|
T Consensus 57 -~~~~--~~~--~~Dvvf~a~~~~~s~~~a~~~~~~G~~vIDlSa~~R~~~~~p~~vpevN~~~i~~~-~~iIanpgC~t 130 (366)
T 3pwk_A 57 -TTET--AFE--GVDIALFSAGSSTSAKYAPYAVKAGVVVVDNTSYFRQNPDVPLVVPEVNAHALDAH-NGIIACPNCST 130 (366)
T ss_dssp -CCTT--TTT--TCSEEEECSCHHHHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCHHHHGGGGTTC-CSEEECCCHHH
T ss_pred -CCHH--Hhc--CCCEEEECCChHhHHHHHHHHHHCCCEEEEcCCccccCCCceEEEccCCHHHHcCC-CCeEECCCcHH
Confidence 2344 343 8999999999999999999999999966556765 456678999999999999864 68999999999
Q ss_pred HhHHHHHHHHhhhcCceEEEEee-ecc
Q 024349 243 NCLAPFVKVMDEELGKQSDLLND-HSV 268 (269)
Q Consensus 243 n~LaPvlkvL~d~fGI~~g~vTT-hsv 268 (269)
||++|+|++|+++|||+++.||| |++
T Consensus 131 t~~~l~l~pL~~~~~i~~i~v~t~~~v 157 (366)
T 3pwk_A 131 IQMMVALEPVRQKWGLDRIIVSTYQAV 157 (366)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEEEEBCG
T ss_pred HHHHHHHHHHHHhCCCcEEEEEEEEec
Confidence 99999999999999999999998 986
No 33
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=99.92 E-value=2.8e-25 Score=209.60 Aligned_cols=155 Identities=14% Similarity=0.150 Sum_probs=121.1
Q ss_pred eeeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEec
Q 024349 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (269)
Q Consensus 86 ~ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~ 164 (269)
++||+|+| ||+|||.++|+|.++ +.+++++|++..+.. .+||++||.|.+.+ . ..+ .+ .
T Consensus 16 ~~kV~IiGAtG~iG~~llr~L~~~--p~~elvai~~~~~~g-----~~~~~~~~~~~~~v-~---~dl-------~~-~- 75 (359)
T 1xyg_A 16 DIRIGLLGASGYTGAEIVRLLANH--PHFQVTLMTADRKAG-----QSMESVFPHLRAQK-L---PTL-------VS-V- 75 (359)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHTC--SSEEEEEEBCSTTTT-----SCHHHHCGGGTTSC-C---CCC-------BC-G-
T ss_pred CcEEEEECcCCHHHHHHHHHHHcC--CCcEEEEEeCchhcC-----CCHHHhCchhcCcc-c---ccc-------ee-c-
Confidence 37999999 999999999999876 468999999752221 57899999987653 1 011 11 1
Q ss_pred CCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecCC-CCC-C---------------CCeEEeec---Cc
Q 024349 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA-KGA-D---------------IPTYVVGV---NE 224 (269)
Q Consensus 165 ~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP~-k~~-D---------------ip~iV~GV---N~ 224 (269)
+ ++ .|. ++|+||+|||.+.+++.++.| ++|++.|-+|++. .++ + .|++|||+ |+
T Consensus 76 -~-~~-~~~--~vDvVf~atp~~~s~~~a~~~-~aG~~VId~sa~~R~~~~~~y~~~y~~~~~~~~~l~~~vygvpE~n~ 149 (359)
T 1xyg_A 76 -K-DA-DFS--TVDAVFCCLPHGTTQEIIKEL-PTALKIVDLSADFRLRNIAEYEEWYGQPHKAVELQKEVVYGLTEILR 149 (359)
T ss_dssp -G-GC-CGG--GCSEEEECCCTTTHHHHHHTS-CTTCEEEECSSTTTCSCHHHHHHHHSSCCSCHHHHTTCEECCHHHHH
T ss_pred -c-hh-Hhc--CCCEEEEcCCchhHHHHHHHH-hCCCEEEECCccccCCchhhhhhhhcCCcCChhhcCCceEECCccCH
Confidence 1 22 575 899999999999999999999 9999543345442 221 0 04677777 99
Q ss_pred cccCCCCCceEEcCChhHHhHHHHHHHHhhhcCce--EEEEee-ecc
Q 024349 225 KDYDHEVANIVSNASCTTNCLAPFVKVMDEELGKQ--SDLLND-HSV 268 (269)
Q Consensus 225 ~~~~~~~~~IISnaSCTTn~LaPvlkvL~d~fGI~--~g~vTT-hsv 268 (269)
+.|+. .+|||||||+|||++|+|++|+++|+|+ +++||| |++
T Consensus 150 ~~i~~--~~iIanpgC~tt~~~~~l~pL~~~~~i~~~~i~v~t~~~~ 194 (359)
T 1xyg_A 150 EDIKK--ARLVANPGCYPTTIQLPLVPLLKANLIKHENIIIDAKSGV 194 (359)
T ss_dssp HHHHT--CSEEECCCHHHHHHHHHHHHHHHTTCBCSSSCEEEEEEEG
T ss_pred HHhcc--CCEEECCCcHHHHHHHHHHHHHHcCCCCCCeEEEEEEEEc
Confidence 99985 5899999999999999999999999999 999998 975
No 34
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=99.91 E-value=1.5e-25 Score=210.24 Aligned_cols=165 Identities=20% Similarity=0.304 Sum_probs=124.9
Q ss_pred ceeeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEcC-CCCcccccccccccccccccCceEEEecCCeEEECCEEEEEE
Q 024349 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND-SGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVV 162 (269)
Q Consensus 85 ~~ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaInd-~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~ 162 (269)
|++||+|+| ||+||+.++|+|.++ +.++++++++ .... --+||+.|+.+... .+..+++.+.+.
T Consensus 7 M~~kV~IiGAtG~iG~~llr~L~~~--p~~ev~~i~~s~~~~-----g~~~~~~~~~~~~~-------~~~~~~~~~~~~ 72 (354)
T 1ys4_A 7 MKIKVGVLGATGSVGQRFVQLLADH--PMFELTALAASERSA-----GKKYKDACYWFQDR-------DIPENIKDMVVI 72 (354)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTC--SSEEEEEEEECTTTT-----TSBHHHHSCCCCSS-------CCCHHHHTCBCE
T ss_pred ccceEEEECcCCHHHHHHHHHHhcC--CCCEEEEEEcccccc-----cccHHHhccccccc-------ccccCceeeEEE
Confidence 558999999 999999999999876 4689999974 2111 11256777765210 111122223332
Q ss_pred ecCCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecCCC---CCCCCeEEeecCccccCC-C--------
Q 024349 163 SNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAK---GADIPTYVVGVNEKDYDH-E-------- 230 (269)
Q Consensus 163 ~~~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP~k---~~Dip~iV~GVN~~~~~~-~-------- 230 (269)
+.+|++ |.+.++|+||+|+|.+.+++.++.|+++|++ ||++++. ++|.|++|+|||++.|.. +
T Consensus 73 -~~~~~~--~~~~~~DvV~~atp~~~~~~~a~~~~~aG~~--VId~s~~~R~~~~~~~~vpevn~~~~~~~e~~r~~~~~ 147 (354)
T 1ys4_A 73 -PTDPKH--EEFEDVDIVFSALPSDLAKKFEPEFAKEGKL--IFSNASAYRMEEDVPLVIPEVNADHLELIEIQREKRGW 147 (354)
T ss_dssp -ESCTTS--GGGTTCCEEEECCCHHHHHHHHHHHHHTTCE--EEECCSTTTTCTTSCBCCHHHHGGGGGHHHHHHHHHCC
T ss_pred -eCCHHH--HhcCCCCEEEECCCchHHHHHHHHHHHCCCE--EEECCchhcCCCCCCccCcccCHHHhcChhhhhhhccc
Confidence 235554 6445899999999999999999999999984 7877752 446899999999998863 0
Q ss_pred CCceEEcCChhHHhHHHHHHHHhhhcCceEEEEee-ecc
Q 024349 231 VANIVSNASCTTNCLAPFVKVMDEELGKQSDLLND-HSV 268 (269)
Q Consensus 231 ~~~IISnaSCTTn~LaPvlkvL~d~fGI~~g~vTT-hsv 268 (269)
+.+||+||+|+|||++|+|++|+++|||++++||| |++
T Consensus 148 ~~~iIanpgC~tt~~~l~l~pL~~~~gi~~~~v~t~~~~ 186 (354)
T 1ys4_A 148 DGAIITNPNCSTICAVITLKPIMDKFGLEAVFIATMQAV 186 (354)
T ss_dssp SSEEEECCCHHHHHHHHHHHHHHHHHCCSEEEEEEEBCS
T ss_pred CCeEEECCCHHHHHHHHHHHHHHHhcCCcEEEEEEEEEc
Confidence 14699999999999999999999999999999998 986
No 35
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=99.91 E-value=3.2e-24 Score=202.05 Aligned_cols=153 Identities=22% Similarity=0.330 Sum_probs=121.1
Q ss_pred eeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEecC
Q 024349 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (269)
Q Consensus 87 ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~~ 165 (269)
+||||.| +|.+|+.++|+|.+++++.++++.+... + + .|+.+.+.|+.+.+.. -
T Consensus 2 ~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~-------------~---------~--aG~~~~~~~~~~~~~~-~ 56 (344)
T 3tz6_A 2 LSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASA-------------R---------S--QGRKLAFRGQEIEVED-A 56 (344)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECT-------------T---------T--SSCEEEETTEEEEEEE-T
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECc-------------c---------c--CCCceeecCCceEEEe-C
Confidence 6899999 9999999999999885433444333211 1 1 4566778887776643 2
Q ss_pred CCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecC-CCCCCCCeEEeecCc-cccCCCCCceEEcCChhHH
Q 024349 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP-AKGADIPTYVVGVNE-KDYDHEVANIVSNASCTTN 243 (269)
Q Consensus 166 ~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP-~k~~Dip~iV~GVN~-~~~~~~~~~IISnaSCTTn 243 (269)
+++ .|. ++|+||+|+|.+.+++.+++|+++|++.|-+|++ ++++|+|++|+|||+ +.|+..+.+|||||+|+||
T Consensus 57 ~~~--~~~--~~Dvvf~a~~~~~s~~~a~~~~~~G~~vID~Sa~~R~~~~~p~~vpevN~~~~i~~~~~~iIanpgC~tt 132 (344)
T 3tz6_A 57 ETA--DPS--GLDIALFSAGSAMSKVQAPRFAAAGVTVIDNSSAWRKDPDVPLVVSEVNFERDAHRRPKGIIANPNCTTM 132 (344)
T ss_dssp TTS--CCT--TCSEEEECSCHHHHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCTTTSHHHHTTCCTTSEEECCCHHHH
T ss_pred CHH--Hhc--cCCEEEECCChHHHHHHHHHHHhCCCEEEECCCccccCCCccEEEccCCCHHHhhhcCCCEEECCCcHHH
Confidence 343 453 8999999999999999999999999954444554 356688999999999 8887522489999999999
Q ss_pred hHHHHHHHHhhhcCceEEEEee-ecc
Q 024349 244 CLAPFVKVMDEELGKQSDLLND-HSV 268 (269)
Q Consensus 244 ~LaPvlkvL~d~fGI~~g~vTT-hsv 268 (269)
|++|+|++|+++|||+++.||| |++
T Consensus 133 ~~~l~l~pL~~~~~i~~i~v~t~~~~ 158 (344)
T 3tz6_A 133 AAMPVLKVLHDEARLVRLVVSSYQAV 158 (344)
T ss_dssp HHHHHHHHHHHHHCEEEEEEEEEBCG
T ss_pred HHHHHHHHHHHhCCCceEEEEeccCC
Confidence 9999999999999999999998 986
No 36
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=99.91 E-value=1.3e-24 Score=203.87 Aligned_cols=154 Identities=16% Similarity=0.075 Sum_probs=120.4
Q ss_pred eeeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEec
Q 024349 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (269)
Q Consensus 86 ~ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~ 164 (269)
++||+|+| ||+|||.++|+|.++ +.+++++|++..+. -.+|++.|+.|.+.. .+.+.
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~--p~~elv~v~s~~~~-----g~~~~~~~~~~~g~~-------------~~~~~-- 61 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALSH--PYLEVKQVTSRRFA-----GEPVHFVHPNLRGRT-------------NLKFV-- 61 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTC--TTEEEEEEBCSTTT-----TSBGGGTCGGGTTTC-------------CCBCB--
T ss_pred CCEEEEECCCCHHHHHHHHHHHcC--CCcEEEEEECchhh-----CchhHHhCchhcCcc-------------ccccc--
Confidence 47999999 999999999999876 46899999875221 146889999886531 11121
Q ss_pred CCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecCC-CCC-C--------------CCeEEeec---Ccc
Q 024349 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA-KGA-D--------------IPTYVVGV---NEK 225 (269)
Q Consensus 165 ~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP~-k~~-D--------------ip~iV~GV---N~~ 225 (269)
+++ +| .++|+||+|+|.+.+++.++.|+++|++.|.+|++. .++ + .|.+|||+ |++
T Consensus 62 -~~~--~~--~~vDvV~~a~g~~~s~~~a~~~~~aG~~VId~Sa~~r~~~~~~y~~~y~~h~~~e~l~~~vygvpE~n~~ 136 (345)
T 2ozp_A 62 -PPE--KL--EPADILVLALPHGVFAREFDRYSALAPVLVDLSADFRLKDPELYRRYYGEHPRPDLLGRFVYAVPELYRE 136 (345)
T ss_dssp -CGG--GC--CCCSEEEECCCTTHHHHTHHHHHTTCSEEEECSSTTSCSCHHHHHHHHCCCSSGGGTTSSEECCHHHHHH
T ss_pred -chh--Hh--cCCCEEEEcCCcHHHHHHHHHHHHCCCEEEEcCccccCCChHHHHhhhccccchhhhccCcEeccccCHH
Confidence 222 37 389999999999999999999999999654456643 321 0 03566666 999
Q ss_pred ccCCCCCceEEcCChhHHhHHHHHHHHhhhcCce--EEEEee-ecc
Q 024349 226 DYDHEVANIVSNASCTTNCLAPFVKVMDEELGKQ--SDLLND-HSV 268 (269)
Q Consensus 226 ~~~~~~~~IISnaSCTTn~LaPvlkvL~d~fGI~--~g~vTT-hsv 268 (269)
.|+. .+|||||||+|||++|+|++|+++|+|+ +++||| |++
T Consensus 137 ~i~~--~~iIanp~C~tt~~~~~l~pL~~~~~i~~~~i~v~t~~~~ 180 (345)
T 2ozp_A 137 ALKG--ADWIAGAGCNATATLLGLYPLLKAGVLKPTPIFVTLLIST 180 (345)
T ss_dssp HHHT--CSEEECCCHHHHHHHHHHHHHHHTTCBCSSCEEEEEEECS
T ss_pred Hhhc--CCEEeCCCcHHHHHHHHHHHHHHhcCCCCCeEEEEEEEEc
Confidence 9975 5899999999999999999999999999 999998 975
No 37
>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A
Probab=99.91 E-value=2.6e-25 Score=211.39 Aligned_cols=153 Identities=17% Similarity=0.081 Sum_probs=116.9
Q ss_pred eeEEEEc-CChHHHHHHH-HHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEE-ECCEEEEEEe
Q 024349 87 LKVAING-FGRIGRNFLR-CWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETIS-VDGKLIKVVS 163 (269)
Q Consensus 87 ikVaInG-fGrIGR~llR-~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~-inGk~I~V~~ 163 (269)
+||||+| +|.+|+.|+| +|.++++..++++.+... | -| +.+. +.|+.+.+..
T Consensus 1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~-------------~-aG-----------~~~~~~~~~~~~~~~ 55 (370)
T 3pzr_A 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTS-------------Q-IG-----------VPAPNFGKDAGMLHD 55 (370)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESS-------------S-TT-----------SBCCCSSSCCCBCEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEecc-------------c-cC-----------cCHHHhCCCceEEEe
Confidence 5899999 9999999999 998886434555444321 1 11 1111 3333333433
Q ss_pred cCCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecCC---CCCCCCeEEeecCccccCCC-CC--ceEEc
Q 024349 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA---KGADIPTYVVGVNEKDYDHE-VA--NIVSN 237 (269)
Q Consensus 164 ~~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP~---k~~Dip~iV~GVN~~~~~~~-~~--~IISn 237 (269)
..+++. | .++|+||+|+|.+.+++.++.|+++|+|++||++++ +++|.|++|+|||++.|+.. ++ ++|||
T Consensus 56 ~~~~~~--~--~~~Dvvf~a~~~~~s~~~~~~~~~~G~k~~VID~ss~fR~~~~~p~~vpevN~~~i~~~~~~~i~~Ian 131 (370)
T 3pzr_A 56 AFDIES--L--KQLDAVITCQGGSYTEKVYPALRQAGWKGYWIDAASTLRMDKEAIITLDPVNLKQILHGIHHGTKTFVG 131 (370)
T ss_dssp TTCHHH--H--TTCSEEEECSCHHHHHHHHHHHHHTTCCCEEEECSSTTTTCTTEEEECHHHHHHHHHHHHHTTCCEEEE
T ss_pred cCChhH--h--ccCCEEEECCChHHHHHHHHHHHHCCCCEEEEeCCchhccCCCCcEEcccCCHHHHhhhhhcCCcEEEc
Confidence 223332 4 389999999999999999999999999888998875 56678999999999988641 02 35999
Q ss_pred CChhHHhHHHHHHHHhhhcCceEEEEee-ecc
Q 024349 238 ASCTTNCLAPFVKVMDEELGKQSDLLND-HSV 268 (269)
Q Consensus 238 aSCTTn~LaPvlkvL~d~fGI~~g~vTT-hsv 268 (269)
|+|||||++|+|++|+++|||+++.||| |++
T Consensus 132 p~C~tt~~~l~L~pL~~~~~I~~i~v~t~~av 163 (370)
T 3pzr_A 132 GNCTVSLMLMALGGLYERGLVEWMSAMTYQAA 163 (370)
T ss_dssp CCHHHHHHHHHHHHHHHTTCEEEEEEEEEBCG
T ss_pred CChHHHHHHHHHHHHHHhCCCcEEEEEeEEec
Confidence 9999999999999999999999999998 986
No 38
>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}
Probab=99.90 E-value=4.6e-25 Score=210.19 Aligned_cols=154 Identities=14% Similarity=0.045 Sum_probs=116.8
Q ss_pred eeeEEEEc-CChHHHHHHH-HHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEE-ECCEEEEEE
Q 024349 86 KLKVAING-FGRIGRNFLR-CWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETIS-VDGKLIKVV 162 (269)
Q Consensus 86 ~ikVaInG-fGrIGR~llR-~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~-inGk~I~V~ 162 (269)
++||||+| +|.+|+.|+| +|.++++..++++.+... | .++.+. ++|+.+.+.
T Consensus 4 ~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~-------------~------------aG~~~~~~~~~~~~v~ 58 (377)
T 3uw3_A 4 SMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTS-------------N------------AGGKAPSFAKNETTLK 58 (377)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESS-------------C------------TTSBCCTTCCSCCBCE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEech-------------h------------cCCCHHHcCCCceEEE
Confidence 47999999 9999999999 888876434454444221 0 111111 233333343
Q ss_pred ecCCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecCC---CCCCCCeEEeecCccccCCC-CC--ceEE
Q 024349 163 SNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA---KGADIPTYVVGVNEKDYDHE-VA--NIVS 236 (269)
Q Consensus 163 ~~~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP~---k~~Dip~iV~GVN~~~~~~~-~~--~IIS 236 (269)
...+++. | .++|+||+|+|.+.+++.++.|+++|+|++||++++ +++|+|++|+|||++.|+.. ++ ++|+
T Consensus 59 ~~~~~~~--~--~~vDvvf~a~~~~~s~~~~~~~~~~G~k~~VID~ss~fR~~~~~p~~vpevN~~~i~~~~~~~i~~Ia 134 (377)
T 3uw3_A 59 DATSIDD--L--KKCDVIITCQGGDYTNDVFPKLRAAGWNGYWIDAASSLRMKDDAVIILDPVNLNVIKDALVNGTKNFI 134 (377)
T ss_dssp ETTCHHH--H--HTCSEEEECSCHHHHHHHHHHHHHTTCCSEEEECSSTTTTCTTEEEECHHHHHHHHHHHHHTTCCEEE
T ss_pred eCCChhH--h--cCCCEEEECCChHHHHHHHHHHHHCCCCEEEEeCCcccccCCCCceECCcCCHHHHhhhhhcCCcEEE
Confidence 2223332 4 389999999999999999999999999888998875 56678999999999988641 02 3599
Q ss_pred cCChhHHhHHHHHHHHhhhcCceEEEEee-ecc
Q 024349 237 NASCTTNCLAPFVKVMDEELGKQSDLLND-HSV 268 (269)
Q Consensus 237 naSCTTn~LaPvlkvL~d~fGI~~g~vTT-hsv 268 (269)
||+|||||++|+|++|+++|||+++.||| |++
T Consensus 135 np~C~tt~~~l~L~pL~~~~~I~~i~v~t~~av 167 (377)
T 3uw3_A 135 GGNCTVSLMLMALGGLFRENLVDWMTAMTYQAA 167 (377)
T ss_dssp ECCHHHHHHHHHHHHHHHTTCEEEEEEEEEBCG
T ss_pred cCCHHHHHHHHHHHHHHHhCCCCEEEEeeeecc
Confidence 99999999999999999999999999998 986
No 39
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=99.85 E-value=1.9e-22 Score=190.66 Aligned_cols=164 Identities=18% Similarity=0.246 Sum_probs=116.5
Q ss_pred ceeeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEcCCCC-cccccccccccccccccCceEEEecCCeEEECCEEEEEE
Q 024349 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGG-VKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVV 162 (269)
Q Consensus 85 ~~ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaInd~~~-~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~ 162 (269)
+++||||.| +|.+|+.++|+|.+++ .++++.+..... =+.+...+.+- .|..+... ++.+.+.
T Consensus 6 ~~~kVaIvGATGyvG~eLlrlL~~hP--~~el~~l~S~~saGk~~~~~~p~~-~~~~~~~~------------~~~~~v~ 70 (359)
T 4dpk_A 6 RTLKAAILGATGLVGIEYVRMLSNHP--YIKPAYLAGKGSVGKPYGEVVRWQ-TVGQVPKE------------IADMEIK 70 (359)
T ss_dssp CCEEEEETTTTSTTHHHHHHHHTTCS--SEEEEEEEESTTTTSBHHHHCCCC-SSSCCCHH------------HHTCBCE
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhCC--CceEEEEECchhcCCChhHhcccc-cccccccc------------cccceEE
Confidence 358999999 9999999999887763 577776643200 01111110000 00001100 0011221
Q ss_pred ecCCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecC-CCCCCCCeEEeecCccccCC--C-------CC
Q 024349 163 SNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP-AKGADIPTYVVGVNEKDYDH--E-------VA 232 (269)
Q Consensus 163 ~~~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP-~k~~Dip~iV~GVN~~~~~~--~-------~~ 232 (269)
+-+++. | .++|+||+|+|.+.+++.++.|+++|++.|.+|++ +.++|+|++|+|||++.++. . +.
T Consensus 71 -~~~~~~--~--~~vDvvf~a~p~~~s~~~a~~~~~~G~~vIDlSa~~R~~~~~p~~vpEvN~~~i~~i~~~~~~~~~~~ 145 (359)
T 4dpk_A 71 -PTDPKL--M--DDVDIIFSPLPQGAAGPVEEQFAKEGFPVISNSPDHRFDPDVPLLVPELNPHTISLIDEQRKRREWKG 145 (359)
T ss_dssp -ECCGGG--C--TTCCEEEECCCTTTHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCTTTCGGGGGHHHHHHHHHTCSS
T ss_pred -eCCHHH--h--cCCCEEEECCChHHHHHHHHHHHHCCCEEEEcCCCccCCCCccEEEcCCCHHHHhhHhhcccccccCc
Confidence 123333 4 28999999999999999999999999988888887 45667899999999998853 1 02
Q ss_pred ceEEcCChhHHhHHHHHHHHhhhcCceEEEEee-ecc
Q 024349 233 NIVSNASCTTNCLAPFVKVMDEELGKQSDLLND-HSV 268 (269)
Q Consensus 233 ~IISnaSCTTn~LaPvlkvL~d~fGI~~g~vTT-hsv 268 (269)
+|||||+|+|+|++|+|++|+++|||++++||| |++
T Consensus 146 ~iIanPgC~tt~~~l~L~PL~~~~gi~~v~v~t~~g~ 182 (359)
T 4dpk_A 146 FIVTTPLCTAQGAAIPLGAIFKDYKMDGAFITTIQSL 182 (359)
T ss_dssp EEEECCCHHHHHHHHHHHHHHHHSCEEEEEEEEEECS
T ss_pred cEEECCCcHHHHHHHHHHHHHHhcCCcEEEEEEEecc
Confidence 599999999999999999999999999999998 986
No 40
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=99.85 E-value=1.9e-22 Score=190.66 Aligned_cols=164 Identities=18% Similarity=0.246 Sum_probs=116.4
Q ss_pred ceeeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEcCCCC-cccccccccccccccccCceEEEecCCeEEECCEEEEEE
Q 024349 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGG-VKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVV 162 (269)
Q Consensus 85 ~~ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaInd~~~-~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~ 162 (269)
+++||||.| +|.+|+.++|+|.+++ .++++.+..... =+.+...+.+- .|..+... ++.+.+.
T Consensus 6 ~~~kVaIvGATGyvG~eLlrlL~~hP--~~el~~l~S~~saGk~~~~~~p~~-~~~~~~~~------------~~~~~v~ 70 (359)
T 4dpl_A 6 RTLKAAILGATGLVGIEYVRMLSNHP--YIKPAYLAGKGSVGKPYGEVVRWQ-TVGQVPKE------------IADMEIK 70 (359)
T ss_dssp CCEEEEETTTTSTTHHHHHHHHTTCS--SEEEEEEEESTTTTSBHHHHCCCC-SSSCCCHH------------HHTCBCE
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhCC--CceEEEEECchhcCCChhHhcccc-cccccccc------------cccceEE
Confidence 358999999 9999999999887763 577776643200 01111110000 00001100 0011221
Q ss_pred ecCCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecC-CCCCCCCeEEeecCccccCC--C-------CC
Q 024349 163 SNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP-AKGADIPTYVVGVNEKDYDH--E-------VA 232 (269)
Q Consensus 163 ~~~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP-~k~~Dip~iV~GVN~~~~~~--~-------~~ 232 (269)
+-+++. | .++|+||+|+|.+.+++.++.|+++|++.|.+|++ +.++|+|++|+|||++.++. . +.
T Consensus 71 -~~~~~~--~--~~vDvvf~a~p~~~s~~~a~~~~~~G~~vIDlSa~~R~~~~~p~~vpEvN~~~i~~i~~~~~~~~~~~ 145 (359)
T 4dpl_A 71 -PTDPKL--M--DDVDIIFSPLPQGAAGPVEEQFAKEGFPVISNSPDHRFDPDVPLLVPELNPHTISLIDEQRKRREWKG 145 (359)
T ss_dssp -ECCGGG--C--TTCCEEEECCCTTTHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCTTTCGGGGGHHHHHHHHHTCSS
T ss_pred -eCCHHH--h--cCCCEEEECCChHHHHHHHHHHHHCCCEEEEcCCCccCCCCccEEEcCCCHHHHhhHhhcccccccCc
Confidence 123333 4 28999999999999999999999999988888887 45667899999999998853 1 02
Q ss_pred ceEEcCChhHHhHHHHHHHHhhhcCceEEEEee-ecc
Q 024349 233 NIVSNASCTTNCLAPFVKVMDEELGKQSDLLND-HSV 268 (269)
Q Consensus 233 ~IISnaSCTTn~LaPvlkvL~d~fGI~~g~vTT-hsv 268 (269)
+|||||+|+|+|++|+|++|+++|||++++||| |++
T Consensus 146 ~iIanPgC~tt~~~l~L~PL~~~~gi~~v~v~t~~g~ 182 (359)
T 4dpl_A 146 FIVTTPLCTAQGAAIPLGAIFKDYKMDGAFITTIQSL 182 (359)
T ss_dssp EEEECCCHHHHHHHHHHHHHHHHSCEEEEEEEEEBCG
T ss_pred cEEECCCcHHHHHHHHHHHHHHhcCCcEEEEEEEecc
Confidence 599999999999999999999999999999998 986
No 41
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=99.82 E-value=7.2e-21 Score=179.47 Aligned_cols=157 Identities=11% Similarity=0.011 Sum_probs=118.0
Q ss_pred eeeEEEEc-CChHHHHHHHHHHhCC-CC--CceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEE
Q 024349 86 KLKVAING-FGRIGRNFLRCWHGRK-DS--PLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKV 161 (269)
Q Consensus 86 ~ikVaInG-fGrIGR~llR~l~~r~-~~--~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V 161 (269)
++||+|+| +|++|+.++|.|.+++ ++ .++++++....+..+ ++++.|+.|.+... +.+
T Consensus 9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk-----~~~~~~~~l~~~~~-------------~~~ 70 (352)
T 2nqt_A 9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGS-----TLGEHHPHLTPLAH-------------RVV 70 (352)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTS-----BGGGTCTTCGGGTT-------------CBC
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCC-----chhhhcccccccce-------------eee
Confidence 47999999 9999999999999764 11 578888865311111 25677777754211 111
Q ss_pred EecCCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecCCC-CC-C-------------CCeEEeec--Cc
Q 024349 162 VSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAK-GA-D-------------IPTYVVGV--NE 224 (269)
Q Consensus 162 ~~~~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP~k-~~-D-------------ip~iV~GV--N~ 224 (269)
.. .+++ .|. ++|+||+|+|.+.+++.++.+ ++|++.|.+|++.. ++ + .|..|+++ |.
T Consensus 71 ~~-~~~~--~~~--~~DvVf~alg~~~s~~~~~~~-~~G~~vIDlSa~~R~~~~~~~~~~y~~~h~~~~vyglPEv~~n~ 144 (352)
T 2nqt_A 71 EP-TEAA--VLG--GHDAVFLALPHGHSAVLAQQL-SPETLIIDCGADFRLTDAAVWERFYGSSHAGSWPYGLPELPGAR 144 (352)
T ss_dssp EE-CCHH--HHT--TCSEEEECCTTSCCHHHHHHS-CTTSEEEECSSTTTCSCHHHHHHHHSSCCCCCCCBSCTTSTTHH
T ss_pred cc-CCHH--Hhc--CCCEEEECCCCcchHHHHHHH-hCCCEEEEECCCccCCcchhhhhhccccCCCCeeEEecccccCH
Confidence 11 1232 254 899999999999999999999 99987666788753 32 2 26666666 99
Q ss_pred cccCCCCCceEEcCChhHHhHHHHHHHHhhhcCce-EEEEee-ecc
Q 024349 225 KDYDHEVANIVSNASCTTNCLAPFVKVMDEELGKQ-SDLLND-HSV 268 (269)
Q Consensus 225 ~~~~~~~~~IISnaSCTTn~LaPvlkvL~d~fGI~-~g~vTT-hsv 268 (269)
+.++. .+||+||+|+|+|+++.|++|+++++|+ ++.|+| |++
T Consensus 145 ~~i~~--~~iIanPgC~tt~~~lal~PL~~~~~i~~~i~v~t~~g~ 188 (352)
T 2nqt_A 145 DQLRG--TRRIAVPGCYPTAALLALFPALAADLIEPAVTVVAVSGT 188 (352)
T ss_dssp HHHTT--CSEEECCCHHHHHHHHHHHHHHHTTCSCSEEEEEEEECG
T ss_pred HHHhc--CCEEEcCCHHHHHHHHHHHHHHHcCCCcceEEEEEEecc
Confidence 99975 5899999999999999999999999999 999988 876
No 42
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=99.82 E-value=1e-20 Score=180.43 Aligned_cols=164 Identities=21% Similarity=0.293 Sum_probs=115.7
Q ss_pred ceeeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEc--CC-CCcccccccccccccccccCceEEEecCCeEEECCEEEE
Q 024349 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN--DS-GGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIK 160 (269)
Q Consensus 85 ~~ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaIn--d~-~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~ 160 (269)
+++||||.| +|.+|+.++|+|.+++ .++++.+- .. .+ +.+.. .| +|... ..|..+++.+.
T Consensus 18 ~~~kVaIvGAtG~vG~ell~lL~~hp--~~el~~l~aS~~saG-k~~~~------~~-~~~~~------~~~p~~~~~~~ 81 (381)
T 3hsk_A 18 SVKKAGVLGATGSVGQRFILLLSKHP--EFEIHALGASSRSAG-KKYKD------AA-SWKQT------ETLPETEQDIV 81 (381)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCS--SEEEEEEEECTTTTT-SBHHH------HC-CCCCS------SCCCHHHHTCB
T ss_pred CccEEEEECCCChHHHHHHHHHHcCC--CceEEEeeccccccC-CCHHH------hc-ccccc------cccccccccce
Confidence 458999999 9999999999998874 46776552 11 11 11110 11 11000 00000001122
Q ss_pred EEecCCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecC-CCCCCCCeEEeecCccccC-----------
Q 024349 161 VVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP-AKGADIPTYVVGVNEKDYD----------- 228 (269)
Q Consensus 161 V~~~~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP-~k~~Dip~iV~GVN~~~~~----------- 228 (269)
+. +-++++ .|. ++|+||+|+|.+.+++.++.++++|++.|-+|++ ++++|+|++|++||++.|.
T Consensus 82 v~-~~~~~~-~~~--~~Dvvf~alp~~~s~~~~~~~~~~G~~VIDlSa~fR~~~~vplvv~~vn~~~~~l~E~~r~~~~~ 157 (381)
T 3hsk_A 82 VQ-ECKPEG-NFL--ECDVVFSGLDADVAGDIEKSFVEAGLAVVSNAKNYRREKDVPLVVPIVNPEHIDVVENKVKQAVS 157 (381)
T ss_dssp CE-ESSSCT-TGG--GCSEEEECCCHHHHHHHHHHHHHTTCEEEECCSTTTTCTTSCEECTTTCGGGGHHHHHHHHHHHH
T ss_pred EE-eCchhh-hcc--cCCEEEECCChhHHHHHHHHHHhCCCEEEEcCCcccCCCCCcEEecccCHHHcCCHhhhhhhhcc
Confidence 22 122321 353 8999999999999999999999999976666775 5666889999999998875
Q ss_pred ---CCCCceEEcCChhHHhHHHHHHHHhhhcC-ceEEEEee-ecc
Q 024349 229 ---HEVANIVSNASCTTNCLAPFVKVMDEELG-KQSDLLND-HSV 268 (269)
Q Consensus 229 ---~~~~~IISnaSCTTn~LaPvlkvL~d~fG-I~~g~vTT-hsv 268 (269)
-.+.+||+||+|+|+|+++.|++|+++|| |+++.|+| |++
T Consensus 158 ~~~i~~~~iIaNPgC~tt~~~laL~PL~~~~glI~~v~v~t~~gv 202 (381)
T 3hsk_A 158 KGGKKPGFIICISNCSTAGLVAPLKPLVEKFGPIDALTTTTLQAI 202 (381)
T ss_dssp TTCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCEEEEEEEEEBCC
T ss_pred cccccCCcEEECCCcHHHHHHHHHHHHHHhcCCceEEEEEEeecc
Confidence 12257999999999999999999999999 99999988 886
No 43
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=99.78 E-value=7e-20 Score=172.03 Aligned_cols=161 Identities=18% Similarity=0.214 Sum_probs=112.0
Q ss_pred eeeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEec
Q 024349 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (269)
Q Consensus 86 ~ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~ 164 (269)
|+||+|.| +|.+|+.++|+|.+++ .++++.+-...+.+..... +...|..|.+.. .+.+...
T Consensus 4 M~kv~IvGatG~vG~~l~~~L~~~p--~~el~~l~s~~~~~saGk~--~~~~~p~~~~~~-------------~~~v~~~ 66 (337)
T 3dr3_A 4 MLNTLIVGASGYAGAELVTYVNRHP--HMNITALTVSAQSNDAGKL--ISDLHPQLKGIV-------------ELPLQPM 66 (337)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCT--TEEEEEEEEETTCTTTTSB--HHHHCGGGTTTC-------------CCBEEEE
T ss_pred ceEEEEECCCChHHHHHHHHHHhCC--CCcEEEEEecCchhhcCCc--hHHhCccccCcc-------------ceeEecc
Confidence 47999999 9999999999998863 5777666321100000000 111222222110 1222211
Q ss_pred CCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecCC-C-CCCCC---------------eEEeec---Cc
Q 024349 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA-K-GADIP---------------TYVVGV---NE 224 (269)
Q Consensus 165 ~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP~-k-~~Dip---------------~iV~GV---N~ 224 (269)
.++++ |. .++|+||+|+|.+.+++.+++|+++|++.|.+|++. . ++|+| .+|||+ |.
T Consensus 67 ~~~~~--~~-~~~Dvvf~a~p~~~s~~~~~~~~~~g~~vIDlSa~fR~~d~~v~~~wy~~~~~~p~l~~~~vyglPEvn~ 143 (337)
T 3dr3_A 67 SDISE--FS-PGVDVVFLATAHEVSHDLAPQFLEAGCVVFDLSGAFRVNDATFYEKYYGFTHQYPELLEQAAYGLAEWCG 143 (337)
T ss_dssp SSGGG--TC-TTCSEEEECSCHHHHHHHHHHHHHTTCEEEECSSTTSSSCHHHHHHHTSSCCSCHHHHHHCEECCTTTCC
T ss_pred CCHHH--Hh-cCCCEEEECCChHHHHHHHHHHHHCCCEEEEcCCccccCCcccchhhccccccChhhhcceEEEccccCH
Confidence 02333 31 289999999999999999999999999877778764 3 33332 457777 99
Q ss_pred cccCCCCCceEEcCChhHHhHHHHHHHHhh--hcCceEE-EEee-ecc
Q 024349 225 KDYDHEVANIVSNASCTTNCLAPFVKVMDE--ELGKQSD-LLND-HSV 268 (269)
Q Consensus 225 ~~~~~~~~~IISnaSCTTn~LaPvlkvL~d--~fGI~~g-~vTT-hsv 268 (269)
+.++. .+|||||+|+|+|++++|++|++ .||++++ .||| |++
T Consensus 144 ~~i~~--~~iIanPgC~tt~~~l~L~PL~~~g~~~~~~i~~v~t~~g~ 189 (337)
T 3dr3_A 144 NKLKE--ANLIAVPGCYPTAAQLALKPLIDADLLDLNQWPVINATSGV 189 (337)
T ss_dssp HHHHT--CSEEECCCHHHHHHHHHHHHHHHTTCBCTTSCCEEEEEECG
T ss_pred HHhCC--CCEEecCChHHHHHHHHHHHHHHcCccCCCceEEEEEeecc
Confidence 99975 58999999999999999999999 6999999 9988 975
No 44
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=99.60 E-value=3.5e-16 Score=147.86 Aligned_cols=152 Identities=12% Similarity=0.091 Sum_probs=111.1
Q ss_pred ceeeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEe
Q 024349 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (269)
Q Consensus 85 ~~ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~ 163 (269)
.++||||.| +|.+|+.++|+|.+++ .++++.+......- -+|+++|+.|. +.+.+.
T Consensus 12 ~~~~V~IvGAtG~vG~ellrlL~~hP--~~el~~l~S~~~aG-----~~~~~~~p~~~---------------~~l~~~- 68 (351)
T 1vkn_A 12 HMIRAGIIGATGYTGLELVRLLKNHP--EAKITYLSSRTYAG-----KKLEEIFPSTL---------------ENSILS- 68 (351)
T ss_dssp CCEEEEEESTTSHHHHHHHHHHHHCT--TEEEEEEECSTTTT-----SBHHHHCGGGC---------------CCCBCB-
T ss_pred ceeEEEEECCCCHHHHHHHHHHHcCC--CcEEEEEeCccccc-----CChHHhChhhc---------------cCceEE-
Confidence 468999999 9999999999999884 57888776431110 12445555443 111221
Q ss_pred cCCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecC---CCCC-C-----------C------CeEEeec
Q 024349 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP---AKGA-D-----------I------PTYVVGV 222 (269)
Q Consensus 164 ~~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP---~k~~-D-----------i------p~iV~GV 222 (269)
+-+++++ | .++|+||+|+|...+++.++++ +|+ +||+.+ ++++ | . |..++++
T Consensus 69 ~~~~~~~-~--~~~Dvvf~alp~~~s~~~~~~~--~g~--~VIDlSsdfRl~~~~~y~~~y~~~h~~p~~~~~~yglPE~ 141 (351)
T 1vkn_A 69 EFDPEKV-S--KNCDVLFTALPAGASYDLVREL--KGV--KIIDLGADFRFDDPGVYREWYGKELSGYENIKRVYGLPEL 141 (351)
T ss_dssp CCCHHHH-H--HHCSEEEECCSTTHHHHHHTTC--CSC--EEEESSSTTTCSSHHHHHHHHCCCCTTGGGCCEEECCHHH
T ss_pred eCCHHHh-h--cCCCEEEECCCcHHHHHHHHHh--CCC--EEEECChhhhCCchhhhhhhcCCCCCchhhcCCceECCcc
Confidence 1123322 2 3799999999999999999887 788 577554 3432 3 2 5556666
Q ss_pred CccccCCCCCceEEcCChhHHhHHHHHHHHhhhcCce--EEEEee-ecc
Q 024349 223 NEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGKQ--SDLLND-HSV 268 (269)
Q Consensus 223 N~~~~~~~~~~IISnaSCTTn~LaPvlkvL~d~fGI~--~g~vTT-hsv 268 (269)
|.+.+.. .+||+||+|+|+|+.+.|++|+++++|+ ++.++| |+|
T Consensus 142 n~e~i~~--a~iIANPgC~~t~~~laL~PL~~~~~i~~~~iiv~t~sgv 188 (351)
T 1vkn_A 142 HREEIKN--AQVVGNPGCYPTSVILALAPALKHNLVDPETILVDAKSGV 188 (351)
T ss_dssp HHHHHTT--CSEEECCCHHHHHHHHHHHHHHHTTCSCCSEEEEEEEEEG
T ss_pred CHHHhcc--CCEEeCCChHHHHHHHHHHHHHHcCCCCCCEEEEEEEeec
Confidence 9998875 4899999999999999999999999999 999988 876
No 45
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=97.75 E-value=2.2e-05 Score=72.40 Aligned_cols=141 Identities=21% Similarity=0.174 Sum_probs=87.0
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCCCCccc-ccccccccccccccCceEEEecCCeEEECCEEEEEEec
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKN-ASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~-~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~ 164 (269)
++||||+|+|.||+.+++.+.++ .+.+++++|-|. +++. ...+. ..+|. .. .+
T Consensus 4 ~irVaIIG~G~iG~~~~~~l~~~-~~~~elvav~d~-~~~~~~~~~a---~~~g~---~~-----------------~~- 57 (312)
T 1nvm_B 4 KLKVAIIGSGNIGTDLMIKVLRN-AKYLEMGAMVGI-DAASDGLARA---QRMGV---TT-----------------TY- 57 (312)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH-CSSEEEEEEECS-CTTCHHHHHH---HHTTC---CE-----------------ES-
T ss_pred CCEEEEEcCcHHHHHHHHHHHhh-CcCeEEEEEEeC-ChhhhHHHHH---HHcCC---Cc-----------------cc-
Confidence 58999999999999999998762 245899999886 3332 11111 01111 00 00
Q ss_pred CCCCC----CCCCCCCccEEEEcCCCCCChhhHHHHHHc--CCCEEEEe-cCCCCCCCCeEEeecCccccCCC-CCceEE
Q 024349 165 RDPLQ----LPWAELGIDIVIEGTGVFVDGPGAGKHIQA--GAKKVIIT-APAKGADIPTYVVGVNEKDYDHE-VANIVS 236 (269)
Q Consensus 165 ~~P~~----i~w~~~gvDiVve~TG~f~~~e~a~~Hl~a--GakkVIIS-AP~k~~Dip~iV~GVN~~~~~~~-~~~IIS 236 (269)
.+.++ .+| .++|+|++|||.....+.+...+++ |. .|++ .|.- -.|..++.+|.+..... ..++++
T Consensus 58 ~~~e~ll~~~~~--~~iDvV~~atp~~~h~~~a~~al~a~~Gk--~Vi~ekp~~--~g~~~~p~v~~~~~~~~~~~~lva 131 (312)
T 1nvm_B 58 AGVEGLIKLPEF--ADIDFVFDATSASAHVQNEALLRQAKPGI--RLIDLTPAA--IGPYCVPVVNLEEHLGKLNVNMVT 131 (312)
T ss_dssp SHHHHHHHSGGG--GGEEEEEECSCHHHHHHHHHHHHHHCTTC--EEEECSTTC--SSCBCCHHHHTTTTTTCSEEECCC
T ss_pred CCHHHHHhccCC--CCCcEEEECCChHHHHHHHHHHHHhCCCC--EEEEcCccc--ccccccCccCHHHHHhccCCcEEE
Confidence 11111 112 3799999999988888888899998 87 3443 3321 12666667787765321 024666
Q ss_pred cCChhHHhHHHHHHHHhhhcCceEE
Q 024349 237 NASCTTNCLAPFVKVMDEELGKQSD 261 (269)
Q Consensus 237 naSCTTn~LaPvlkvL~d~fGI~~g 261 (269)
++.| +..|++..+.+.|.....
T Consensus 132 ~~g~---~~ipl~~a~~~~~~~~~~ 153 (312)
T 1nvm_B 132 CGGQ---ATIPMVAAVSRVAKVHYA 153 (312)
T ss_dssp HHHH---HHHHHHHHHHTTSCEEEE
T ss_pred eCCc---ccchHHHHhhhhccchhH
Confidence 6555 456788888877776543
No 46
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=97.62 E-value=7.5e-05 Score=68.42 Aligned_cols=89 Identities=19% Similarity=0.209 Sum_probs=61.9
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEecC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~~ 165 (269)
++||+|+|+|++|+.+++.+... ++++++++.|....+.+ . + | +.+ ..
T Consensus 3 ~irV~IiG~G~mG~~~~~~l~~~--~~~elvav~d~~~~~~~----~----~------------------g--v~~--~~ 50 (320)
T 1f06_A 3 NIRVAIVGYGNLGRSVEKLIAKQ--PDMDLVGIFSRRATLDT----K----T------------------P--VFD--VA 50 (320)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTC--SSEEEEEEEESSSCCSS----S----S------------------C--EEE--GG
T ss_pred CCEEEEEeecHHHHHHHHHHhcC--CCCEEEEEEcCCHHHhh----c----C------------------C--Cce--eC
Confidence 57999999999999999998754 35899888775211100 0 0 1 112 12
Q ss_pred CCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecCC
Q 024349 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA 210 (269)
Q Consensus 166 ~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP~ 210 (269)
+.+++- .++|+|++||+.....+.+...+++|. .||++.|.
T Consensus 51 d~~~ll---~~~DvViiatp~~~h~~~~~~al~aG~-~Vv~ekp~ 91 (320)
T 1f06_A 51 DVDKHA---DDVDVLFLCMGSATDIPEQAPKFAQFA-CTVDTYDN 91 (320)
T ss_dssp GGGGTT---TTCSEEEECSCTTTHHHHHHHHHTTTS-EEECCCCC
T ss_pred CHHHHh---cCCCEEEEcCCcHHHHHHHHHHHHCCC-EEEECCCC
Confidence 334432 278999999999988888889999886 56666653
No 47
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=97.22 E-value=0.00033 Score=63.66 Aligned_cols=89 Identities=19% Similarity=0.197 Sum_probs=58.5
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEecC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~~ 165 (269)
++||||+|+|+||+.+++.+... +++++++|-|. +++.+.. +|- ....+ .
T Consensus 9 ~irv~IIG~G~iG~~~~~~l~~~--~~~elvav~d~-~~~~~~~-------~g~------------------~~~~~--~ 58 (304)
T 3bio_A 9 KIRAAIVGYGNIGRYALQALREA--PDFEIAGIVRR-NPAEVPF-------ELQ------------------PFRVV--S 58 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHC--TTEEEEEEECC---------------CCT------------------TSCEE--S
T ss_pred CCEEEEECChHHHHHHHHHHhcC--CCCEEEEEEcC-CHHHHHH-------cCC------------------CcCCH--H
Confidence 58999999999999999998764 45899988776 3322110 110 00001 1
Q ss_pred CCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecC
Q 024349 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (269)
Q Consensus 166 ~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP 209 (269)
+..+. .++|+|+.||+.....+.+...+++|. .|+...|
T Consensus 59 ~l~~~----~~~DvViiatp~~~h~~~~~~al~aG~-~Vi~ekP 97 (304)
T 3bio_A 59 DIEQL----ESVDVALVCSPSREVERTALEILKKGI-CTADSFD 97 (304)
T ss_dssp SGGGS----SSCCEEEECSCHHHHHHHHHHHHTTTC-EEEECCC
T ss_pred HHHhC----CCCCEEEECCCchhhHHHHHHHHHcCC-eEEECCC
Confidence 22222 278999999999988899999999886 4554433
No 48
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=97.19 E-value=0.00035 Score=63.42 Aligned_cols=98 Identities=19% Similarity=0.205 Sum_probs=63.9
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEec
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~ 164 (269)
|++||||+|+|.||+..++.+......++++++|-|. +.+....+.+ .||. . . ++
T Consensus 1 M~~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~-~~~~a~~~a~---~~~~---~-~---------------~~-- 55 (334)
T 3ohs_X 1 MALRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAAR-DLSRAKEFAQ---KHDI---P-K---------------AY-- 55 (334)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECS-SHHHHHHHHH---HHTC---S-C---------------EE--
T ss_pred CccEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcC-CHHHHHHHHH---HcCC---C-c---------------cc--
Confidence 5689999999999999999886543335799999887 4443322211 1110 0 0 00
Q ss_pred CCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecC
Q 024349 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (269)
Q Consensus 165 ~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP 209 (269)
.+.+++- .+..+|+|+-||....-.+.+...+++| |.|++--|
T Consensus 56 ~~~~~ll-~~~~vD~V~i~tp~~~H~~~~~~al~~G-khVl~EKP 98 (334)
T 3ohs_X 56 GSYEELA-KDPNVEVAYVGTQHPQHKAAVMLCLAAG-KAVLCEKP 98 (334)
T ss_dssp SSHHHHH-HCTTCCEEEECCCGGGHHHHHHHHHHTT-CEEEEESS
T ss_pred CCHHHHh-cCCCCCEEEECCCcHHHHHHHHHHHhcC-CEEEEECC
Confidence 1111110 1126899999999998889999999999 56777555
No 49
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=97.03 E-value=0.0019 Score=60.10 Aligned_cols=87 Identities=23% Similarity=0.262 Sum_probs=57.0
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCC------CCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEE
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKD------SPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLI 159 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~------~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I 159 (269)
++||||.|+|.||+.+++.+.+... .++++++|-+. +++... + |+ . .
T Consensus 3 ~irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~-~~~~~~---------~-~~------~-~--------- 55 (332)
T 2ejw_A 3 ALKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVR-DPRKPR---------A-IP------Q-E--------- 55 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECS-CTTSCC---------S-SC------G-G---------
T ss_pred eeEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEEC-CHHHhh---------c-cC------c-c---------
Confidence 5899999999999999999876531 14788888875 221110 0 00 0 0
Q ss_pred EEEecCCCCCCCCCCCCccEEEEcCCCCC-ChhhHHHHHHcCCCEEEEe
Q 024349 160 KVVSNRDPLQLPWAELGIDIVIEGTGVFV-DGPGAGKHIQAGAKKVIIT 207 (269)
Q Consensus 160 ~V~~~~~P~~i~w~~~gvDiVve~TG~f~-~~e~a~~Hl~aGakkVIIS 207 (269)
.+. .|++++- .+|+|+||||... ..+.+.+.|++|. -|++
T Consensus 56 ~~~--~d~~~ll----~iDvVve~t~~~~~a~~~~~~AL~aGK--hVVt 96 (332)
T 2ejw_A 56 LLR--AEPFDLL----EADLVVEAMGGVEAPLRLVLPALEAGI--PLIT 96 (332)
T ss_dssp GEE--SSCCCCT----TCSEEEECCCCSHHHHHHHHHHHHTTC--CEEE
T ss_pred ccc--CCHHHHh----CCCEEEECCCCcHHHHHHHHHHHHcCC--eEEE
Confidence 011 2455553 7899999999763 3567778889887 3444
No 50
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=96.98 E-value=0.00084 Score=60.74 Aligned_cols=94 Identities=23% Similarity=0.290 Sum_probs=62.9
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEec
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~ 164 (269)
|++||||+|+|.||+..++.+... +++++++|-|. +.+....+.+ .+|- . +
T Consensus 2 m~~~vgiiG~G~~g~~~~~~l~~~--~~~~l~av~d~-~~~~~~~~~~---~~~~--------------------~-~-- 52 (331)
T 4hkt_A 2 MTVRFGLLGAGRIGKVHAKAVSGN--ADARLVAVADA-FPAAAEAIAG---AYGC--------------------E-V-- 52 (331)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHC--TTEEEEEEECS-SHHHHHHHHH---HTTC--------------------E-E--
T ss_pred CceEEEEECCCHHHHHHHHHHhhC--CCcEEEEEECC-CHHHHHHHHH---HhCC--------------------C-c--
Confidence 678999999999999999988765 35899999887 4433322211 0110 0 0
Q ss_pred CCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecC
Q 024349 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (269)
Q Consensus 165 ~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP 209 (269)
.+++++- .+.++|+|+-||......+.+...+++| |.|++--|
T Consensus 53 ~~~~~~l-~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~v~~EKP 95 (331)
T 4hkt_A 53 RTIDAIE-AAADIDAVVICTPTDTHADLIERFARAG-KAIFCEKP 95 (331)
T ss_dssp CCHHHHH-HCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSC
T ss_pred CCHHHHh-cCCCCCEEEEeCCchhHHHHHHHHHHcC-CcEEEecC
Confidence 1121110 1126899999999998889999999998 56776555
No 51
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=96.95 E-value=0.00064 Score=61.93 Aligned_cols=96 Identities=20% Similarity=0.266 Sum_probs=62.8
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEec
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~ 164 (269)
|++||||+|+|.||+..++.+... +++++++|-|. +.+....+.+ .+|. . .++
T Consensus 1 M~~rvgiIG~G~~g~~~~~~l~~~--~~~~l~av~d~-~~~~~~~~~~---~~~~---~----------------~~~-- 53 (344)
T 3ezy_A 1 MSLRIGVIGLGRIGTIHAENLKMI--DDAILYAISDV-REDRLREMKE---KLGV---E----------------KAY-- 53 (344)
T ss_dssp -CEEEEEECCSHHHHHHHHHGGGS--TTEEEEEEECS-CHHHHHHHHH---HHTC---S----------------EEE--
T ss_pred CeeEEEEEcCCHHHHHHHHHHHhC--CCcEEEEEECC-CHHHHHHHHH---HhCC---C----------------cee--
Confidence 468999999999999999988764 45899999887 3333222211 1110 0 011
Q ss_pred CCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecC
Q 024349 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (269)
Q Consensus 165 ~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP 209 (269)
.+.+++ ..+.++|+|+-||......+.+...+++| |.|++--|
T Consensus 54 ~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~v~~EKP 96 (344)
T 3ezy_A 54 KDPHEL-IEDPNVDAVLVCSSTNTHSELVIACAKAK-KHVFCEKP 96 (344)
T ss_dssp SSHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESC
T ss_pred CCHHHH-hcCCCCCEEEEcCCCcchHHHHHHHHhcC-CeEEEECC
Confidence 112111 01126899999999988888888999998 45777555
No 52
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=96.93 E-value=0.0011 Score=60.38 Aligned_cols=98 Identities=21% Similarity=0.267 Sum_probs=63.7
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEec
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~ 164 (269)
|++||||+|+|.||+..++.+.++. +++++++|-|. +.+....+.+ .+|. .+ .++
T Consensus 1 M~~rigiIG~G~~g~~~~~~l~~~~-~~~~l~av~d~-~~~~~~~~~~---~~g~---~~---------------~~~-- 55 (344)
T 3mz0_A 1 MSLRIGVIGTGAIGKEHINRITNKL-SGAEIVAVTDV-NQEAAQKVVE---QYQL---NA---------------TVY-- 55 (344)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTC-SSEEEEEEECS-SHHHHHHHHH---HTTC---CC---------------EEE--
T ss_pred CeEEEEEECccHHHHHHHHHHHhhC-CCcEEEEEEcC-CHHHHHHHHH---HhCC---CC---------------eee--
Confidence 4689999999999999999987331 45899999887 3333222211 1110 00 111
Q ss_pred CCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecC
Q 024349 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (269)
Q Consensus 165 ~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP 209 (269)
.+++++- .+.++|+|+-||......+.+...+++| |.|++--|
T Consensus 56 ~~~~~ll-~~~~~D~V~i~tp~~~h~~~~~~al~~G-k~vl~EKP 98 (344)
T 3mz0_A 56 PNDDSLL-ADENVDAVLVTSWGPAHESSVLKAIKAQ-KYVFCEKP 98 (344)
T ss_dssp SSHHHHH-HCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSC
T ss_pred CCHHHHh-cCCCCCEEEECCCchhHHHHHHHHHHCC-CcEEEcCC
Confidence 1222110 1126899999999998889999999999 46777555
No 53
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=96.92 E-value=0.0012 Score=60.45 Aligned_cols=96 Identities=23% Similarity=0.242 Sum_probs=61.4
Q ss_pred ceeeEEEEcCChHHH-HHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEe
Q 024349 85 AKLKVAINGFGRIGR-NFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (269)
Q Consensus 85 ~~ikVaInGfGrIGR-~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~ 163 (269)
|++||||+|+|.||+ ..++.+... +++++++|-|....+.++ ..+|.+. ++++
T Consensus 1 M~~rvgiiG~G~~g~~~~~~~l~~~--~~~~l~av~d~~~~~~~a------~~~~~~~-----------------~~~~- 54 (349)
T 3i23_A 1 MTVKMGFIGFGKSANRYHLPYVMIR--ETLEVKTIFDLHVNEKAA------APFKEKG-----------------VNFT- 54 (349)
T ss_dssp CCEEEEEECCSHHHHHTTHHHHTTC--TTEEEEEEECTTCCHHHH------HHHHTTT-----------------CEEE-
T ss_pred CeeEEEEEccCHHHHHHHHHHHhhC--CCeEEEEEECCCHHHHHH------HhhCCCC-----------------CeEE-
Confidence 568999999999998 567766543 468999998873111111 1111100 0111
Q ss_pred cCCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecC
Q 024349 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (269)
Q Consensus 164 ~~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP 209 (269)
.+.+++- .+.++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 55 -~~~~~ll-~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~EKP 97 (349)
T 3i23_A 55 -ADLNELL-TDPEIELITICTPAHTHYDLAKQAILAG-KSVIVEKP 97 (349)
T ss_dssp -SCTHHHH-SCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSC
T ss_pred -CCHHHHh-cCCCCCEEEEeCCcHHHHHHHHHHHHcC-CEEEEECC
Confidence 1233221 1236899999999998889999999999 56776445
No 54
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=96.89 E-value=0.0002 Score=65.83 Aligned_cols=96 Identities=16% Similarity=0.220 Sum_probs=55.6
Q ss_pred ceeeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEe
Q 024349 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (269)
Q Consensus 85 ~~ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~ 163 (269)
+++||+|+| +||+||.+++++.+. +++++|++-|..+.+... .|- |.+.+. +. .| +.++
T Consensus 20 ~~irV~V~Ga~GrMGr~i~~~v~~~--~~~eLvg~vd~~~~~~~G----~d~--gel~G~----~~-----~g--v~v~- 79 (288)
T 3ijp_A 20 GSMRLTVVGANGRMGRELITAIQRR--KDVELCAVLVRKGSSFVD----KDA--SILIGS----DF-----LG--VRIT- 79 (288)
T ss_dssp -CEEEEESSTTSHHHHHHHHHHHTC--SSEEEEEEBCCTTCTTTT----SBG--GGGTTC----SC-----CS--CBCB-
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhC--CCCEEEEEEecCCccccc----cch--HHhhcc----Cc-----CC--ceee-
Confidence 458999999 999999999998865 469999997752211100 110 111000 00 01 1121
Q ss_pred cCCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEE
Q 024349 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKV 204 (269)
Q Consensus 164 ~~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkV 204 (269)
.|++++. .++|+|||.|......+.+...++.|..-|
T Consensus 80 -~dl~~ll---~~aDVvIDFT~p~a~~~~~~~~l~~Gv~vV 116 (288)
T 3ijp_A 80 -DDPESAF---SNTEGILDFSQPQASVLYANYAAQKSLIHI 116 (288)
T ss_dssp -SCHHHHT---TSCSEEEECSCHHHHHHHHHHHHHHTCEEE
T ss_pred -CCHHHHh---cCCCEEEEcCCHHHHHHHHHHHHHcCCCEE
Confidence 2333322 157888888866555666677777787433
No 55
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=96.89 E-value=0.00085 Score=59.95 Aligned_cols=33 Identities=18% Similarity=0.396 Sum_probs=28.4
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~ 121 (269)
++||+|+|+|++||.+++++.++. + +++++-|.
T Consensus 3 MmkI~ViGaGrMG~~i~~~l~~~~--~-eLva~~d~ 35 (243)
T 3qy9_A 3 SMKILLIGYGAMNQRVARLAEEKG--H-EIVGVIEN 35 (243)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--C-EEEEEECS
T ss_pred ceEEEEECcCHHHHHHHHHHHhCC--C-EEEEEEec
Confidence 479999999999999999998763 5 88887665
No 56
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=96.85 E-value=0.0023 Score=58.51 Aligned_cols=92 Identities=27% Similarity=0.367 Sum_probs=61.5
Q ss_pred eeeEEEEcCChHHHH-HHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEec
Q 024349 86 KLKVAINGFGRIGRN-FLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (269)
Q Consensus 86 ~ikVaInGfGrIGR~-llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~ 164 (269)
++||||+|+|+||+. .++.+... +++++++|-|. +.+.... +| .+. +++
T Consensus 7 ~~rvgiiG~G~~g~~~~~~~~~~~--~~~~l~av~d~-~~~~~~~--~~-------~~~----------------~~~-- 56 (352)
T 3kux_A 7 KIKVGLLGYGYASKTFHAPLIMGT--PGLELAGVSSS-DASKVHA--DW-------PAI----------------PVV-- 56 (352)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTS--TTEEEEEEECS-CHHHHHT--TC-------SSC----------------CEE--
T ss_pred CceEEEECCCHHHHHHHHHHHhhC--CCcEEEEEECC-CHHHHHh--hC-------CCC----------------ceE--
Confidence 589999999999996 77877654 45899999887 3333220 01 000 111
Q ss_pred CCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecC
Q 024349 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (269)
Q Consensus 165 ~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP 209 (269)
.+.+++- .+.++|+|+.||......+.+...+++| |.|++--|
T Consensus 57 ~~~~~ll-~~~~vD~V~i~tp~~~H~~~~~~al~aG-khV~~EKP 99 (352)
T 3kux_A 57 SDPQMLF-NDPSIDLIVIPTPNDTHFPLAQSALAAG-KHVVVDKP 99 (352)
T ss_dssp SCHHHHH-HCSSCCEEEECSCTTTHHHHHHHHHHTT-CEEEECSS
T ss_pred CCHHHHh-cCCCCCEEEEeCChHHHHHHHHHHHHCC-CcEEEECC
Confidence 1222211 1236899999999999999999999999 46776555
No 57
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=96.81 E-value=0.0024 Score=59.32 Aligned_cols=37 Identities=30% Similarity=0.486 Sum_probs=30.3
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhC----CCCCceEEEEcCC
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGR----KDSPLDVVVVNDS 121 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r----~~~~l~iVaInd~ 121 (269)
+++||+|.|+|.||+.+++.+.++ .+.++++++|.|.
T Consensus 3 k~irVgIiG~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~ 43 (325)
T 3ing_A 3 KEIRIILMGTGNVGLNVLRIIDASNRRRSAFSIKVVGVSDS 43 (325)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHHHC--CEEEEEEEECS
T ss_pred ceEEEEEEcCcHHHHHHHHHHHhchhhccCCCEEEEEEEec
Confidence 358999999999999999998763 1246899999876
No 58
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=96.77 E-value=0.0023 Score=58.11 Aligned_cols=94 Identities=23% Similarity=0.353 Sum_probs=63.3
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEecC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~~ 165 (269)
++||||+|+|.||+..++.|... +++++++|-|. +.+.+..+.+ .+| + .++ .
T Consensus 4 ~~rvgiiG~G~~g~~~~~~l~~~--~~~~l~av~d~-~~~~~~~~a~---~~g-----~---------------~~~--~ 55 (344)
T 3euw_A 4 TLRIALFGAGRIGHVHAANIAAN--PDLELVVIADP-FIEGAQRLAE---ANG-----A---------------EAV--A 55 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHC--TTEEEEEEECS-SHHHHHHHHH---TTT-----C---------------EEE--S
T ss_pred ceEEEEECCcHHHHHHHHHHHhC--CCcEEEEEECC-CHHHHHHHHH---HcC-----C---------------cee--C
Confidence 47999999999999999998865 35899999886 3333222211 111 0 111 1
Q ss_pred CCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecC
Q 024349 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (269)
Q Consensus 166 ~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP 209 (269)
+++++ ..+.++|+|+.||......+.+...+++|. .|++--|
T Consensus 56 ~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~gk-~v~~EKP 97 (344)
T 3euw_A 56 SPDEV-FARDDIDGIVIGSPTSTHVDLITRAVERGI-PALCEKP 97 (344)
T ss_dssp SHHHH-TTCSCCCEEEECSCGGGHHHHHHHHHHTTC-CEEECSC
T ss_pred CHHHH-hcCCCCCEEEEeCCchhhHHHHHHHHHcCC-cEEEECC
Confidence 22221 112378999999999988899999999984 5777555
No 59
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=96.76 E-value=0.0023 Score=58.84 Aligned_cols=93 Identities=22% Similarity=0.268 Sum_probs=62.0
Q ss_pred ceeeEEEEcCChHHHH-HHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEe
Q 024349 85 AKLKVAINGFGRIGRN-FLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~-llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~ 163 (269)
+++||||+|+|.||+. .++.+... +++++++|-|. +.+..+. +|. +. +++
T Consensus 4 ~~~rvgiiG~G~~g~~~~~~~l~~~--~~~~l~av~d~-~~~~~~~--~~~-------~~----------------~~~- 54 (358)
T 3gdo_A 4 DTIKVGILGYGLSGSVFHGPLLDVL--DEYQISKIMTS-RTEEVKR--DFP-------DA----------------EVV- 54 (358)
T ss_dssp TCEEEEEECCSHHHHHTTHHHHTTC--TTEEEEEEECS-CHHHHHH--HCT-------TS----------------EEE-
T ss_pred CcceEEEEccCHHHHHHHHHHHhhC--CCeEEEEEEcC-CHHHHHh--hCC-------CC----------------ceE-
Confidence 3589999999999996 67776543 46899999887 3333221 110 00 111
Q ss_pred cCCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecC
Q 024349 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (269)
Q Consensus 164 ~~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP 209 (269)
.+.+++- .+.++|+|+.||+.....+.+...+++| |.|++--|
T Consensus 55 -~~~~~ll-~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~EKP 97 (358)
T 3gdo_A 55 -HELEEIT-NDPAIELVIVTTPSGLHYEHTMACIQAG-KHVVMEKP 97 (358)
T ss_dssp -SSTHHHH-TCTTCCEEEECSCTTTHHHHHHHHHHTT-CEEEEESS
T ss_pred -CCHHHHh-cCCCCCEEEEcCCcHHHHHHHHHHHHcC-CeEEEecC
Confidence 1222221 1237899999999999999999999999 46776555
No 60
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=96.75 E-value=0.002 Score=59.30 Aligned_cols=98 Identities=27% Similarity=0.265 Sum_probs=64.0
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEec
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~ 164 (269)
+++||||+|+|.||+..++.+..+ .+.+++++|-|. +.+.+..+.+ .+|. .+ .++
T Consensus 22 ~~~rvgiIG~G~~g~~~~~~l~~~-~~~~~lvav~d~-~~~~~~~~a~---~~g~---~~---------------~~~-- 76 (357)
T 3ec7_A 22 MTLKAGIVGIGMIGSDHLRRLANT-VSGVEVVAVCDI-VAGRAQAALD---KYAI---EA---------------KDY-- 76 (357)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT-CTTEEEEEEECS-STTHHHHHHH---HHTC---CC---------------EEE--
T ss_pred CeeeEEEECCcHHHHHHHHHHHhh-CCCcEEEEEEeC-CHHHHHHHHH---HhCC---CC---------------eee--
Confidence 468999999999999999998733 245899999887 3333222211 1110 00 111
Q ss_pred CCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecC
Q 024349 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (269)
Q Consensus 165 ~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP 209 (269)
.+.+++ ..+..+|+|+-||......+.+...+++| |.|++--|
T Consensus 77 ~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~EKP 119 (357)
T 3ec7_A 77 NDYHDL-INDKDVEVVIITASNEAHADVAVAALNAN-KYVFCEKP 119 (357)
T ss_dssp SSHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESS
T ss_pred CCHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCC-CCEEeecC
Confidence 122211 01126899999999999999999999999 56777555
No 61
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=96.74 E-value=0.002 Score=55.91 Aligned_cols=75 Identities=20% Similarity=0.325 Sum_probs=52.9
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEecCC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRD 166 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~~~ 166 (269)
+||||+|+|++|+.+++.|.. .+++++++-|... + + + . +. .+
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~---~g~~lv~v~d~~~-~--~-------------------~-~----------~~--~~ 42 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLER---NGFEIAAILDVRG-E--H-------------------E-K----------MV--RG 42 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHH---TTCEEEEEECSSC-C--C-------------------T-T----------EE--SS
T ss_pred CEEEEECCCHHHHHHHHHHhc---CCCEEEEEEecCc-c--h-------------------h-h----------hc--CC
Confidence 489999999999999998874 2478877766410 0 0 0 0 11 23
Q ss_pred CCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCC
Q 024349 167 PLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGA 201 (269)
Q Consensus 167 P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGa 201 (269)
++++-- .++|+|++||+.....+.+...+++|.
T Consensus 43 ~~~l~~--~~~DvVv~~~~~~~~~~~~~~~l~~G~ 75 (236)
T 2dc1_A 43 IDEFLQ--REMDVAVEAASQQAVKDYAEKILKAGI 75 (236)
T ss_dssp HHHHTT--SCCSEEEECSCHHHHHHHHHHHHHTTC
T ss_pred HHHHhc--CCCCEEEECCCHHHHHHHHHHHHHCCC
Confidence 433321 378999999998877888888899887
No 62
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=96.74 E-value=0.0022 Score=57.35 Aligned_cols=33 Identities=21% Similarity=0.433 Sum_probs=27.6
Q ss_pred eeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEcCC
Q 024349 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (269)
Q Consensus 87 ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaInd~ 121 (269)
+||+|+| +|++||.+++.+.+. ++++++++-|.
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~--~~~elva~~d~ 34 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAA--DDLTLSAELDA 34 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHC--TTCEEEEEECT
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CCCEEEEEEcc
Confidence 4899999 699999999998765 35899988765
No 63
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=96.73 E-value=0.0025 Score=57.77 Aligned_cols=96 Identities=17% Similarity=0.171 Sum_probs=61.4
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEec
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~ 164 (269)
+++||||+|+|+||+.+++.+... +++++++|-|. +.+....+.+ .+|. . .++
T Consensus 4 ~~~rigiiG~G~ig~~~~~~l~~~--~~~~~~av~d~-~~~~~~~~a~---~~~~---~----------------~~~-- 56 (329)
T 3evn_A 4 SKVRYGVVSTAKVAPRFIEGVRLA--GNGEVVAVSSR-TLESAQAFAN---KYHL---P----------------KAY-- 56 (329)
T ss_dssp -CEEEEEEBCCTTHHHHHHHHHHH--CSEEEEEEECS-CSSTTCC------CCCC---S----------------CEE--
T ss_pred CceEEEEEechHHHHHHHHHHHhC--CCcEEEEEEcC-CHHHHHHHHH---HcCC---C----------------ccc--
Confidence 357999999999999999988754 35899999876 3332221111 0110 0 011
Q ss_pred CCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecC
Q 024349 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (269)
Q Consensus 165 ~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP 209 (269)
.+.+++- .+.++|+|+-||......+.+...+++|. .|++--|
T Consensus 57 ~~~~~ll-~~~~~D~V~i~tp~~~h~~~~~~al~aGk-~Vl~EKP 99 (329)
T 3evn_A 57 DKLEDML-ADESIDVIYVATINQDHYKVAKAALLAGK-HVLVEKP 99 (329)
T ss_dssp SCHHHHH-TCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEEESS
T ss_pred CCHHHHh-cCCCCCEEEECCCcHHHHHHHHHHHHCCC-eEEEccC
Confidence 1222211 12368999999999988899999999984 5676555
No 64
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=96.71 E-value=0.0016 Score=60.11 Aligned_cols=93 Identities=23% Similarity=0.220 Sum_probs=62.1
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEecC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~~ 165 (269)
++||||+|+|.||+..++.+... +.+++++|-|. +.+... ..+ .+|. . ++ .
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~~~--~~~~l~av~d~-~~~~~~-~a~---~~g~-----~---------------~~--~ 55 (359)
T 3e18_A 5 KYQLVIVGYGGMGSYHVTLASAA--DNLEVHGVFDI-LAEKRE-AAA---QKGL-----K---------------IY--E 55 (359)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTS--TTEEEEEEECS-SHHHHH-HHH---TTTC-----C---------------BC--S
T ss_pred cCcEEEECcCHHHHHHHHHHHhC--CCcEEEEEEcC-CHHHHH-HHH---hcCC-----c---------------ee--C
Confidence 58999999999999999988754 45899999887 443332 111 0110 0 00 1
Q ss_pred CCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecC
Q 024349 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (269)
Q Consensus 166 ~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP 209 (269)
+.+++ ..+.++|+|+-||....-.+.+...+++| |.|++--|
T Consensus 56 ~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aG-khVl~EKP 97 (359)
T 3e18_A 56 SYEAV-LADEKVDAVLIATPNDSHKELAISALEAG-KHVVCEKP 97 (359)
T ss_dssp CHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESS
T ss_pred CHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCC-CCEEeeCC
Confidence 11111 01136899999999998889999999999 45676555
No 65
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=96.69 E-value=0.0035 Score=57.16 Aligned_cols=96 Identities=20% Similarity=0.237 Sum_probs=59.9
Q ss_pred ceeeEEEEcCChHHHH-HHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEe
Q 024349 85 AKLKVAINGFGRIGRN-FLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~-llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~ 163 (269)
|++||||+|+|+||+. .++.++.+ .+++++++|-|. +.+.....-+| .+ ++++
T Consensus 1 m~~rvgiiG~G~~g~~~~~~~~~~~-~~~~~l~av~d~-~~~~~~~~~~~-------~~----------------~~~~- 54 (345)
T 3f4l_A 1 MVINCAFIGFGKSTTRYHLPYVLNR-KDSWHVAHIFRR-HAKPEEQAPIY-------SH----------------IHFT- 54 (345)
T ss_dssp -CEEEEEECCSHHHHHHTHHHHTTC-TTTEEEEEEECS-SCCGGGGSGGG-------TT----------------CEEE-
T ss_pred CceEEEEEecCHHHHHHHHHHHHhc-CCCeEEEEEEcC-CHhHHHHHHhc-------CC----------------CceE-
Confidence 4689999999999985 56623332 246899999887 33322111111 10 0111
Q ss_pred cCCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecC
Q 024349 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (269)
Q Consensus 164 ~~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP 209 (269)
.+.+++- .+.++|+|+-||......+.+...+++| |.|++--|
T Consensus 55 -~~~~~ll-~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~EKP 97 (345)
T 3f4l_A 55 -SDLDEVL-NDPDVKLVVVCTHADSHFEYAKRALEAG-KNVLVEKP 97 (345)
T ss_dssp -SCTHHHH-TCTTEEEEEECSCGGGHHHHHHHHHHTT-CEEEECSS
T ss_pred -CCHHHHh-cCCCCCEEEEcCChHHHHHHHHHHHHcC-CcEEEeCC
Confidence 2232221 1236899999999998889999999999 45666444
No 66
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=96.69 E-value=0.0033 Score=57.77 Aligned_cols=93 Identities=18% Similarity=0.301 Sum_probs=62.1
Q ss_pred ceeeEEEEcCChHHHH-HHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEe
Q 024349 85 AKLKVAINGFGRIGRN-FLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~-llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~ 163 (269)
+++||||+|+|+||+. .++.+... +++++++|-|. +.+..+. +| .+. +++
T Consensus 4 ~~~rvgiiG~G~~g~~~~~~~l~~~--~~~~l~av~d~-~~~~~~~--~~-------~~~----------------~~~- 54 (362)
T 3fhl_A 4 EIIKTGLAAFGMSGQVFHAPFISTN--PHFELYKIVER-SKELSKE--RY-------PQA----------------SIV- 54 (362)
T ss_dssp CCEEEEESCCSHHHHHTTHHHHHHC--TTEEEEEEECS-SCCGGGT--TC-------TTS----------------EEE-
T ss_pred CceEEEEECCCHHHHHHHHHHHhhC--CCeEEEEEEcC-CHHHHHH--hC-------CCC----------------ceE-
Confidence 4589999999999996 67777654 45899999887 3333221 11 100 111
Q ss_pred cCCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecC
Q 024349 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (269)
Q Consensus 164 ~~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP 209 (269)
.+.+++- .+.++|+|+-||....-.+.+...+++|. .|++--|
T Consensus 55 -~~~~~ll-~~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~EKP 97 (362)
T 3fhl_A 55 -RSFKELT-EDPEIDLIVVNTPDNTHYEYAGMALEAGK-NVVVEKP 97 (362)
T ss_dssp -SCSHHHH-TCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEEESS
T ss_pred -CCHHHHh-cCCCCCEEEEeCChHHHHHHHHHHHHCCC-eEEEecC
Confidence 1222221 12368999999999988899999999994 5676555
No 67
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=96.66 E-value=0.0018 Score=48.54 Aligned_cols=98 Identities=24% Similarity=0.278 Sum_probs=57.2
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEec
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~ 164 (269)
++.+|+|.|.|.||+.+++.|..+. ..+++++.. +.+.+..+... | +. +.....
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g--~~~v~~~~r--~~~~~~~~~~~----~-----~~-------------~~~~d~ 57 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSS--NYSVTVADH--DLAALAVLNRM----G-----VA-------------TKQVDA 57 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCS--SEEEEEEES--CHHHHHHHHTT----T-----CE-------------EEECCT
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCC--CceEEEEeC--CHHHHHHHHhC----C-----Cc-------------EEEecC
Confidence 4468999999999999999998752 256666543 22222211100 0 00 000001
Q ss_pred CCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEec
Q 024349 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITA 208 (269)
Q Consensus 165 ~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISA 208 (269)
.+++.+.-.-.++|+||.|+|.......+...++.|++.+.++.
T Consensus 58 ~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~g~~~~~~~~ 101 (118)
T 3ic5_A 58 KDEAGLAKALGGFDAVISAAPFFLTPIIAKAAKAAGAHYFDLTE 101 (118)
T ss_dssp TCHHHHHHHTTTCSEEEECSCGGGHHHHHHHHHHTTCEEECCCS
T ss_pred CCHHHHHHHHcCCCEEEECCCchhhHHHHHHHHHhCCCEEEecC
Confidence 11111110012789999999988777777777788997766543
No 68
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=96.65 E-value=0.0019 Score=58.42 Aligned_cols=96 Identities=18% Similarity=0.175 Sum_probs=61.0
Q ss_pred ceeeEEEEcCChHHHHHHHHHH-hCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEe
Q 024349 85 AKLKVAINGFGRIGRNFLRCWH-GRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~-~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~ 163 (269)
.++||+|+|+|.||+..++.+. .. ..+++++|-|. +.+.+..+.+ .+|. . .++
T Consensus 7 ~~~~v~iiG~G~ig~~~~~~l~~~~--~~~~~vav~d~-~~~~~~~~a~---~~g~---~----------------~~~- 60 (346)
T 3cea_A 7 KPLRAAIIGLGRLGERHARHLVNKI--QGVKLVAACAL-DSNQLEWAKN---ELGV---E----------------TTY- 60 (346)
T ss_dssp CCEEEEEECCSTTHHHHHHHHHHTC--SSEEEEEEECS-CHHHHHHHHH---TTCC---S----------------EEE-
T ss_pred CcceEEEEcCCHHHHHHHHHHHhcC--CCcEEEEEecC-CHHHHHHHHH---HhCC---C----------------ccc-
Confidence 4589999999999999999887 43 35899999876 3332221111 1110 0 011
Q ss_pred cCCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecC
Q 024349 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (269)
Q Consensus 164 ~~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP 209 (269)
.+.+++- .+.++|+|+.||+.....+.+...+++|. .|++--|
T Consensus 61 -~~~~~~l-~~~~~D~V~i~tp~~~h~~~~~~al~~G~-~v~~eKp 103 (346)
T 3cea_A 61 -TNYKDMI-DTENIDAIFIVAPTPFHPEMTIYAMNAGL-NVFCEKP 103 (346)
T ss_dssp -SCHHHHH-TTSCCSEEEECSCGGGHHHHHHHHHHTTC-EEEECSC
T ss_pred -CCHHHHh-cCCCCCEEEEeCChHhHHHHHHHHHHCCC-EEEEcCC
Confidence 1222110 11268999999999888888889999984 5555434
No 69
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=96.63 E-value=0.0028 Score=57.16 Aligned_cols=94 Identities=19% Similarity=0.277 Sum_probs=61.0
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEecC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~~ 165 (269)
++||||+|+|.||+.+++.+... +.+++++|-|. +.+....+.+ .+|. ..++ .
T Consensus 1 ~~~vgiiG~G~~g~~~~~~l~~~--~~~~~~~v~d~-~~~~~~~~~~---~~~~-------------------~~~~--~ 53 (325)
T 2ho3_A 1 MLKLGVIGTGAISHHFIEAAHTS--GEYQLVAIYSR-KLETAATFAS---RYQN-------------------IQLF--D 53 (325)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT--TSEEEEEEECS-SHHHHHHHGG---GSSS-------------------CEEE--S
T ss_pred CeEEEEEeCCHHHHHHHHHHHhC--CCeEEEEEEeC-CHHHHHHHHH---HcCC-------------------CeEe--C
Confidence 36999999999999999998764 35899988876 3333221111 1110 0111 1
Q ss_pred CCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecC
Q 024349 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (269)
Q Consensus 166 ~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP 209 (269)
+++++- +.++|+|+.||......+.+...+++|. .|++--|
T Consensus 54 ~~~~~l--~~~~D~V~i~tp~~~h~~~~~~al~~gk-~V~~EKP 94 (325)
T 2ho3_A 54 QLEVFF--KSSFDLVYIASPNSLHFAQAKAALSAGK-HVILEKP 94 (325)
T ss_dssp CHHHHH--TSSCSEEEECSCGGGHHHHHHHHHHTTC-EEEEESS
T ss_pred CHHHHh--CCCCCEEEEeCChHHHHHHHHHHHHcCC-cEEEecC
Confidence 233322 2368999999998888888888888884 4565444
No 70
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=96.61 E-value=0.0016 Score=59.15 Aligned_cols=96 Identities=19% Similarity=0.169 Sum_probs=62.8
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEec
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~ 164 (269)
+++||||+|+|.||+.+++.+.+. +++++++|-|. +.+....+.+ .+|- . . ++
T Consensus 4 ~~~~igiiG~G~~g~~~~~~l~~~--~~~~l~av~d~-~~~~~~~~~~---~~~~---~-~---------------~~-- 56 (330)
T 3e9m_A 4 DKIRYGIMSTAQIVPRFVAGLRES--AQAEVRGIASR-RLENAQKMAK---ELAI---P-V---------------AY-- 56 (330)
T ss_dssp CCEEEEECSCCTTHHHHHHHHHHS--SSEEEEEEBCS-SSHHHHHHHH---HTTC---C-C---------------CB--
T ss_pred CeEEEEEECchHHHHHHHHHHHhC--CCcEEEEEEeC-CHHHHHHHHH---HcCC---C-c---------------ee--
Confidence 458999999999999999998865 35899999887 3333222221 1110 0 0 00
Q ss_pred CCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecC
Q 024349 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (269)
Q Consensus 165 ~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP 209 (269)
.+.+++ ..+.++|+|+-||......+.+...+++|. .|++--|
T Consensus 57 ~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~~gk-~vl~EKP 99 (330)
T 3e9m_A 57 GSYEEL-CKDETIDIIYIPTYNQGHYSAAKLALSQGK-PVLLEKP 99 (330)
T ss_dssp SSHHHH-HHCTTCSEEEECCCGGGHHHHHHHHHHTTC-CEEECSS
T ss_pred CCHHHH-hcCCCCCEEEEcCCCHHHHHHHHHHHHCCC-eEEEeCC
Confidence 111111 011268999999999988888899999984 5676555
No 71
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=96.59 E-value=0.0018 Score=58.61 Aligned_cols=80 Identities=20% Similarity=0.276 Sum_probs=55.8
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEecC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~~ 165 (269)
-+||+|.|||.||+.++|. + .++++++-+ ++. | .| | +.+ ..
T Consensus 12 ~~rV~i~G~GaIG~~v~~~---~---~leLv~v~~----~k~----------g------------el---g--v~a--~~ 52 (253)
T 1j5p_A 12 HMTVLIIGMGNIGKKLVEL---G---NFEKIYAYD----RIS----------K------------DI---P--GVV--RL 52 (253)
T ss_dssp CCEEEEECCSHHHHHHHHH---S---CCSEEEEEC----SSC----------C------------CC---S--SSE--EC
T ss_pred cceEEEECcCHHHHHHHhc---C---CcEEEEEEe----ccc----------c------------cc---C--cee--eC
Confidence 4699999999999999997 2 488877754 111 0 11 1 111 14
Q ss_pred CCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEe
Q 024349 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIIT 207 (269)
Q Consensus 166 ~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIIS 207 (269)
|.+++-. ..|+|+||++..--.+...+-|++|+.-|+.|
T Consensus 53 d~d~lla---~pD~VVe~A~~~av~e~~~~iL~aG~dvv~~S 91 (253)
T 1j5p_A 53 DEFQVPS---DVSTVVECASPEAVKEYSLQILKNPVNYIIIS 91 (253)
T ss_dssp SSCCCCT---TCCEEEECSCHHHHHHHHHHHTTSSSEEEECC
T ss_pred CHHHHhh---CCCEEEECCCHHHHHHHHHHHHHCCCCEEEcC
Confidence 5666652 78999999998866677888999998644443
No 72
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=96.58 E-value=0.0032 Score=58.13 Aligned_cols=93 Identities=17% Similarity=0.313 Sum_probs=60.9
Q ss_pred ceeeEEEEcCChHHHH-HHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEe
Q 024349 85 AKLKVAINGFGRIGRN-FLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~-llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~ 163 (269)
+++||||+|+|+||+. .++.+... +++++++|-|. +.+.+.. +| .+. +++
T Consensus 6 ~~~rvgiiG~G~~g~~~~~~~l~~~--~~~~l~av~d~-~~~~~~~--~~-------~~~----------------~~~- 56 (364)
T 3e82_A 6 NTINIALIGYGFVGKTFHAPLIRSV--PGLNLAFVASR-DEEKVKR--DL-------PDV----------------TVI- 56 (364)
T ss_dssp -CEEEEEECCSHHHHHTHHHHHHTS--TTEEEEEEECS-CHHHHHH--HC-------TTS----------------EEE-
T ss_pred CcceEEEECCCHHHHHHHHHHHhhC--CCeEEEEEEcC-CHHHHHh--hC-------CCC----------------cEE-
Confidence 4589999999999996 67777654 45899999887 3333220 11 110 111
Q ss_pred cCCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecC
Q 024349 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (269)
Q Consensus 164 ~~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP 209 (269)
.+.+++- .+..+|+|+-||......+.+...+++|. -|++--|
T Consensus 57 -~~~~~ll-~~~~~D~V~i~tp~~~H~~~~~~al~aGk-~Vl~EKP 99 (364)
T 3e82_A 57 -ASPEAAV-QHPDVDLVVIASPNATHAPLARLALNAGK-HVVVDKP 99 (364)
T ss_dssp -SCHHHHH-TCTTCSEEEECSCGGGHHHHHHHHHHTTC-EEEECSC
T ss_pred -CCHHHHh-cCCCCCEEEEeCChHHHHHHHHHHHHCCC-cEEEeCC
Confidence 1222211 12368999999999988999999999994 5666555
No 73
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=96.58 E-value=0.0032 Score=57.48 Aligned_cols=95 Identities=16% Similarity=0.142 Sum_probs=62.6
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEec
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~ 164 (269)
+++||||+|+|.||+..++.+... +++++++|-|. +.+....+.+ .+|- . . +
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~l~~~--~~~~lvav~d~-~~~~~~~~~~---~~g~-----~---------------~-~- 55 (354)
T 3db2_A 4 NPVGVAAIGLGRWAYVMADAYTKS--EKLKLVTCYSR-TEDKREKFGK---RYNC-----A---------------G-D- 55 (354)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTC--SSEEEEEEECS-SHHHHHHHHH---HHTC-----C---------------C-C-
T ss_pred CcceEEEEccCHHHHHHHHHHHhC--CCcEEEEEECC-CHHHHHHHHH---HcCC-----C---------------C-c-
Confidence 458999999999999999988654 35899999887 4433322211 1110 0 0 0
Q ss_pred CCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecC
Q 024349 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (269)
Q Consensus 165 ~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP 209 (269)
.+++++- .+.++|+|+-||......+.+...+++| |.|++--|
T Consensus 56 ~~~~~~l-~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~vl~EKP 98 (354)
T 3db2_A 56 ATMEALL-AREDVEMVIITVPNDKHAEVIEQCARSG-KHIYVEKP 98 (354)
T ss_dssp SSHHHHH-HCSSCCEEEECSCTTSHHHHHHHHHHTT-CEEEEESS
T ss_pred CCHHHHh-cCCCCCEEEEeCChHHHHHHHHHHHHcC-CEEEEccC
Confidence 1111110 1136899999999998889999999998 45676555
No 74
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=96.57 E-value=0.0027 Score=61.47 Aligned_cols=92 Identities=22% Similarity=0.283 Sum_probs=58.5
Q ss_pred eeeEEEEcCChHHHHHHHHHHhC-------CCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEE
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGR-------KDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKL 158 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r-------~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~ 158 (269)
++||||.|+|.||+.+++.+.++ .+.++++++|-+. +.+....++ + +.
T Consensus 10 ~irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~-~~~~~~~~~--~--------------~~-------- 64 (444)
T 3mtj_A 10 PIHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVR-NLDKAEALA--G--------------GL-------- 64 (444)
T ss_dssp CEEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECS-CHHHHHHHH--T--------------TC--------
T ss_pred cccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEEC-CHHHhhhhc--c--------------cC--------
Confidence 48999999999999999887642 1246899999886 322211110 0 00
Q ss_pred EEEEecCCCCCCCCCCCCccEEEEcCCC-CCChhhHHHHHHcCCCEEEEec
Q 024349 159 IKVVSNRDPLQLPWAELGIDIVIEGTGV-FVDGPGAGKHIQAGAKKVIITA 208 (269)
Q Consensus 159 I~V~~~~~P~~i~w~~~gvDiVve~TG~-f~~~e~a~~Hl~aGakkVIISA 208 (269)
.++ .|++++ ..+..+|+|++|||. ....+.+...|++|. -|+++
T Consensus 65 -~~~--~d~~el-l~d~diDvVve~tp~~~~h~~~~~~AL~aGK--hVvte 109 (444)
T 3mtj_A 65 -PLT--TNPFDV-VDDPEIDIVVELIGGLEPARELVMQAIANGK--HVVTA 109 (444)
T ss_dssp -CEE--SCTHHH-HTCTTCCEEEECCCSSTTHHHHHHHHHHTTC--EEEEC
T ss_pred -ccc--CCHHHH-hcCCCCCEEEEcCCCchHHHHHHHHHHHcCC--EEEEC
Confidence 011 122221 112378999999996 677788889999986 44544
No 75
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=96.57 E-value=0.0014 Score=60.58 Aligned_cols=36 Identities=33% Similarity=0.549 Sum_probs=29.3
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCC-----CCCceEEEEcCC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRK-----DSPLDVVVVNDS 121 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~-----~~~l~iVaInd~ 121 (269)
++||||.|+|.||+.+++.+.++. +.++++++|-|.
T Consensus 6 ~irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~ 46 (331)
T 3c8m_A 6 TINLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADS 46 (331)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECS
T ss_pred EEeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEEC
Confidence 589999999999999999887532 124799999876
No 76
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=96.52 E-value=0.0022 Score=57.65 Aligned_cols=93 Identities=20% Similarity=0.261 Sum_probs=61.8
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEec
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~ 164 (269)
+++||||+|+|++|+.+++.|.+. +.+++++|-|. +.+....+. .. +.++
T Consensus 9 ~~~~igiIG~G~~g~~~~~~l~~~--~~~~~v~v~d~-~~~~~~~~~-----------------~~--------~~~~-- 58 (315)
T 3c1a_A 9 SPVRLALIGAGRWGKNYIRTIAGL--PGAALVRLASS-NPDNLALVP-----------------PG--------CVIE-- 58 (315)
T ss_dssp CCEEEEEEECTTTTTTHHHHHHHC--TTEEEEEEEES-CHHHHTTCC-----------------TT--------CEEE--
T ss_pred CcceEEEECCcHHHHHHHHHHHhC--CCcEEEEEEeC-CHHHHHHHH-----------------hh--------Cccc--
Confidence 458999999999999999988864 35888888876 333221111 11 1121
Q ss_pred CCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecC
Q 024349 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (269)
Q Consensus 165 ~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP 209 (269)
.+++++- .+.++|+|+.||......+.+...+++|. .|++--|
T Consensus 59 ~~~~~~l-~~~~~D~V~i~tp~~~h~~~~~~al~~Gk-~v~~eKP 101 (315)
T 3c1a_A 59 SDWRSVV-SAPEVEAVIIATPPATHAEITLAAIASGK-AVLVEKP 101 (315)
T ss_dssp SSTHHHH-TCTTCCEEEEESCGGGHHHHHHHHHHTTC-EEEEESS
T ss_pred CCHHHHh-hCCCCCEEEEeCChHHHHHHHHHHHHCCC-cEEEcCC
Confidence 2333221 11368999999999888888888899984 5666545
No 77
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=96.51 E-value=0.0027 Score=58.21 Aligned_cols=99 Identities=15% Similarity=0.164 Sum_probs=61.7
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEec
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~ 164 (269)
+++||||+|+|.||+.+++.+... +.+++++|-|. +.+....+.+ .+|-.. . ..++
T Consensus 5 ~~~~vgiiG~G~ig~~~~~~l~~~--~~~~lv~v~d~-~~~~~~~~a~---~~~~~~-~---------------~~~~-- 60 (362)
T 1ydw_A 5 TQIRIGVMGCADIARKVSRAIHLA--PNATISGVASR-SLEKAKAFAT---ANNYPE-S---------------TKIH-- 60 (362)
T ss_dssp -CEEEEEESCCTTHHHHHHHHHHC--TTEEEEEEECS-SHHHHHHHHH---HTTCCT-T---------------CEEE--
T ss_pred CceEEEEECchHHHHHHHHHHhhC--CCcEEEEEEcC-CHHHHHHHHH---HhCCCC-C---------------Ceee--
Confidence 358999999999999999988764 35899999886 3333222211 111000 0 0111
Q ss_pred CCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecC
Q 024349 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (269)
Q Consensus 165 ~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP 209 (269)
.+.+++ ..+.++|+|+.||......+.+...+++|. .|++--|
T Consensus 61 ~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aGk-~V~~EKP 103 (362)
T 1ydw_A 61 GSYESL-LEDPEIDALYVPLPTSLHVEWAIKAAEKGK-HILLEKP 103 (362)
T ss_dssp SSHHHH-HHCTTCCEEEECCCGGGHHHHHHHHHTTTC-EEEECSS
T ss_pred CCHHHH-hcCCCCCEEEEcCChHHHHHHHHHHHHCCC-eEEEecC
Confidence 122211 011268999999998888888888899885 5666444
No 78
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=96.50 E-value=0.0028 Score=57.48 Aligned_cols=34 Identities=29% Similarity=0.443 Sum_probs=29.5
Q ss_pred eeeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEcCC
Q 024349 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (269)
Q Consensus 86 ~ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaInd~ 121 (269)
++||+|+| +|++||.+++.+.+. +++++|++-+.
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~--~~~eLv~~~d~ 41 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAA--PDATLVGALDR 41 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHC--TTEEEEEEBCC
T ss_pred ccEEEEECCCCHHHHHHHHHHHhC--CCCEEEEEEEe
Confidence 48999999 999999999999875 46899998665
No 79
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=96.47 E-value=0.0042 Score=57.62 Aligned_cols=36 Identities=31% Similarity=0.509 Sum_probs=30.1
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCC------CCCceEEEEcCC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRK------DSPLDVVVVNDS 121 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~------~~~l~iVaInd~ 121 (269)
|+||||.|+|.||+.+++.+.+.. +.++++++|.|.
T Consensus 2 mirvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~ 43 (327)
T 3do5_A 2 MIKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADS 43 (327)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECS
T ss_pred cEEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeC
Confidence 479999999999999999987651 146899999886
No 80
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=96.42 E-value=0.003 Score=57.27 Aligned_cols=96 Identities=17% Similarity=0.142 Sum_probs=62.5
Q ss_pred ceeeEEEEcCChHHHH-HHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEe
Q 024349 85 AKLKVAINGFGRIGRN-FLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~-llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~ 163 (269)
.|+||||+|+|+||+. +++++... +++++++|.|. +++....+.+ .||- . +++
T Consensus 22 ~mirigiIG~G~ig~~~~~~~~~~~--~~~~lvav~d~-~~~~a~~~a~---~~g~---~----------------~~y- 75 (350)
T 4had_A 22 SMLRFGIISTAKIGRDNVVPAIQDA--ENCVVTAIASR-DLTRAREMAD---RFSV---P----------------HAF- 75 (350)
T ss_dssp CCEEEEEESCCHHHHHTHHHHHHHC--SSEEEEEEECS-SHHHHHHHHH---HHTC---S----------------EEE-
T ss_pred CccEEEEEcChHHHHHHHHHHHHhC--CCeEEEEEECC-CHHHHHHHHH---HcCC---C----------------eee-
Confidence 4589999999999986 56777654 45899999987 5444332221 1110 0 011
Q ss_pred cCCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecC
Q 024349 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (269)
Q Consensus 164 ~~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP 209 (269)
.|.+++ ..+.++|+|+=||....-.+.+...+++|. -|++=-|
T Consensus 76 -~d~~el-l~~~~iDaV~I~tP~~~H~~~~~~al~aGk-hVl~EKP 118 (350)
T 4had_A 76 -GSYEEM-LASDVIDAVYIPLPTSQHIEWSIKAADAGK-HVVCEKP 118 (350)
T ss_dssp -SSHHHH-HHCSSCSEEEECSCGGGHHHHHHHHHHTTC-EEEECSC
T ss_pred -CCHHHH-hcCCCCCEEEEeCCCchhHHHHHHHHhcCC-EEEEeCC
Confidence 111111 011368999999999998999999999985 5666444
No 81
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=96.39 E-value=0.0035 Score=56.30 Aligned_cols=92 Identities=16% Similarity=0.168 Sum_probs=59.6
Q ss_pred eeeEEEEcCChHHHH-HHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEec
Q 024349 86 KLKVAINGFGRIGRN-FLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (269)
Q Consensus 86 ~ikVaInGfGrIGR~-llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~ 164 (269)
++||||+|+|.||+. +++.+... +++++++|-|. +.+....+.+ .+|. .+ .
T Consensus 5 ~~~vgiiG~G~~g~~~~~~~l~~~--~~~~lvav~d~-~~~~~~~~~~---~~g~--------------------~~--~ 56 (319)
T 1tlt_A 5 KLRIGVVGLGGIAQKAWLPVLAAA--SDWTLQGAWSP-TRAKALPICE---SWRI--------------------PY--A 56 (319)
T ss_dssp CEEEEEECCSTHHHHTHHHHHHSC--SSEEEEEEECS-SCTTHHHHHH---HHTC--------------------CB--C
T ss_pred cceEEEECCCHHHHHHHHHHHHhC--CCeEEEEEECC-CHHHHHHHHH---HcCC--------------------Cc--c
Confidence 479999999999996 88888654 35899988876 3332211111 1110 00 1
Q ss_pred CCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecC
Q 024349 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (269)
Q Consensus 165 ~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP 209 (269)
.+++.+ +.++|+|+.||+.....+.+...+++|. .|++--|
T Consensus 57 ~~~~~l---~~~~D~V~i~tp~~~h~~~~~~al~~G~-~v~~eKP 97 (319)
T 1tlt_A 57 DSLSSL---AASCDAVFVHSSTASHFDVVSTLLNAGV-HVCVDKP 97 (319)
T ss_dssp SSHHHH---HTTCSEEEECSCTTHHHHHHHHHHHTTC-EEEEESS
T ss_pred CcHHHh---hcCCCEEEEeCCchhHHHHHHHHHHcCC-eEEEeCC
Confidence 122223 2368999999998888888888899885 4566445
No 82
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=96.33 E-value=0.0029 Score=57.78 Aligned_cols=96 Identities=21% Similarity=0.228 Sum_probs=63.8
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEec
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~ 164 (269)
+++||||+|+|.||+..++.+.... +.+++++|-|. +.+....+.+ .+| +.++
T Consensus 12 ~~~rvgiiG~G~~g~~~~~~l~~~~-~~~~lvav~d~-~~~~~~~~~~---~~~--------------------~~~~-- 64 (354)
T 3q2i_A 12 RKIRFALVGCGRIANNHFGALEKHA-DRAELIDVCDI-DPAALKAAVE---RTG--------------------ARGH-- 64 (354)
T ss_dssp SCEEEEEECCSTTHHHHHHHHHHTT-TTEEEEEEECS-SHHHHHHHHH---HHC--------------------CEEE--
T ss_pred CcceEEEEcCcHHHHHHHHHHHhCC-CCeEEEEEEcC-CHHHHHHHHH---HcC--------------------Ccee--
Confidence 4589999999999999999888652 35899999887 4433322211 111 1111
Q ss_pred CCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecC
Q 024349 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (269)
Q Consensus 165 ~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP 209 (269)
.+++++ ..+.++|+|+-||......+.+...+++| |.|++--|
T Consensus 65 ~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~v~~EKP 107 (354)
T 3q2i_A 65 ASLTDM-LAQTDADIVILTTPSGLHPTQSIECSEAG-FHVMTEKP 107 (354)
T ss_dssp SCHHHH-HHHCCCSEEEECSCGGGHHHHHHHHHHTT-CEEEECSS
T ss_pred CCHHHH-hcCCCCCEEEECCCcHHHHHHHHHHHHCC-CCEEEeCC
Confidence 122221 01126899999999998888889999998 45666555
No 83
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=96.31 E-value=0.0094 Score=52.07 Aligned_cols=94 Identities=19% Similarity=0.155 Sum_probs=60.8
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEecCC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRD 166 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~~~ 166 (269)
.+|+|+|.|.+|+.+++.+... . .+++|++-|. +++... -.++|-++ ....+
T Consensus 81 ~rV~IIGaG~~G~~la~~~~~~-~-g~~iVg~~D~-dp~k~g-----------------------~~i~gv~V--~~~~d 132 (211)
T 2dt5_A 81 WGLCIVGMGRLGSALADYPGFG-E-SFELRGFFDV-DPEKVG-----------------------RPVRGGVI--EHVDL 132 (211)
T ss_dssp EEEEEECCSHHHHHHHHCSCCC-S-SEEEEEEEES-CTTTTT-----------------------CEETTEEE--EEGGG
T ss_pred CEEEEECccHHHHHHHHhHhhc-C-CcEEEEEEeC-CHHHHh-----------------------hhhcCCee--ecHHh
Confidence 6899999999999999863322 3 6888888765 222111 11334333 22233
Q ss_pred CCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecCC
Q 024349 167 PLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA 210 (269)
Q Consensus 167 P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP~ 210 (269)
.+++ ..+ ++|.|+-|++.....+-+..-+++|++-++.-+|.
T Consensus 133 l~el-l~~-~ID~ViIA~Ps~~~~ei~~~l~~aGi~~Ilnf~P~ 174 (211)
T 2dt5_A 133 LPQR-VPG-RIEIALLTVPREAAQKAADLLVAAGIKGILNFAPV 174 (211)
T ss_dssp HHHH-STT-TCCEEEECSCHHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred HHHH-HHc-CCCEEEEeCCchhHHHHHHHHHHcCCCEEEECCcc
Confidence 3222 134 79999999998866677777778898766655664
No 84
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=96.31 E-value=0.0032 Score=57.77 Aligned_cols=94 Identities=16% Similarity=0.210 Sum_probs=62.0
Q ss_pred eeeEEEEcCChHHH-HHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEec
Q 024349 86 KLKVAINGFGRIGR-NFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (269)
Q Consensus 86 ~ikVaInGfGrIGR-~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~ 164 (269)
++||||+|+|.||+ .+++.+... +++++++|-|. +.+....+.+ .+|- ...
T Consensus 27 ~~rigiIG~G~~g~~~~~~~l~~~--~~~~l~av~d~-~~~~~~~~a~---~~g~--------------------~~~-- 78 (350)
T 3rc1_A 27 PIRVGVIGCADIAWRRALPALEAE--PLTEVTAIASR-RWDRAKRFTE---RFGG--------------------EPV-- 78 (350)
T ss_dssp CEEEEEESCCHHHHHTHHHHHHHC--TTEEEEEEEES-SHHHHHHHHH---HHCS--------------------EEE--
T ss_pred ceEEEEEcCcHHHHHHHHHHHHhC--CCeEEEEEEcC-CHHHHHHHHH---HcCC--------------------CCc--
Confidence 58999999999998 688888764 35899999876 3333222211 1110 011
Q ss_pred CCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecC
Q 024349 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (269)
Q Consensus 165 ~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP 209 (269)
.+.+++- .+.++|+|+-||......+.+...+++|. .|++--|
T Consensus 79 ~~~~~ll-~~~~~D~V~i~tp~~~h~~~~~~al~aGk-~Vl~EKP 121 (350)
T 3rc1_A 79 EGYPALL-ERDDVDAVYVPLPAVLHAEWIDRALRAGK-HVLAEKP 121 (350)
T ss_dssp ESHHHHH-TCTTCSEEEECCCGGGHHHHHHHHHHTTC-EEEEESS
T ss_pred CCHHHHh-cCCCCCEEEECCCcHHHHHHHHHHHHCCC-cEEEeCC
Confidence 1222211 12368999999999988899999999985 4666555
No 85
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=96.25 E-value=0.0026 Score=59.37 Aligned_cols=98 Identities=21% Similarity=0.223 Sum_probs=62.9
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCC------CCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEE
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRK------DSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKL 158 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~------~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~ 158 (269)
+++||||+|+|.||+..++.+.... ...+++|+|.|. +.+.+..+.+ .|| .. .
T Consensus 25 ~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~-~~~~a~~~a~---~~~---~~-~------------- 83 (412)
T 4gqa_A 25 ARLNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQ-DQAMAERHAA---KLG---AE-K------------- 83 (412)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECS-SHHHHHHHHH---HHT---CS-E-------------
T ss_pred ccceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcC-CHHHHHHHHH---HcC---CC-e-------------
Confidence 3589999999999998888775321 124699999987 4443332221 111 00 0
Q ss_pred EEEEecCCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecC
Q 024349 159 IKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (269)
Q Consensus 159 I~V~~~~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP 209 (269)
++ .|.+++ ..+.++|+|+-||....-.+.+...|++|. -|++--|
T Consensus 84 --~y--~d~~~l-l~~~~vD~V~I~tp~~~H~~~~~~al~aGk-hVl~EKP 128 (412)
T 4gqa_A 84 --AY--GDWREL-VNDPQVDVVDITSPNHLHYTMAMAAIAAGK-HVYCEKP 128 (412)
T ss_dssp --EE--SSHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEEESC
T ss_pred --EE--CCHHHH-hcCCCCCEEEECCCcHHHHHHHHHHHHcCC-CeEeecC
Confidence 11 111111 112368999999999999999999999994 5676555
No 86
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=96.12 E-value=0.0067 Score=54.65 Aligned_cols=94 Identities=19% Similarity=0.261 Sum_probs=58.5
Q ss_pred ceeeEEEEcCChHHH-HHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEe
Q 024349 85 AKLKVAINGFGRIGR-NFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (269)
Q Consensus 85 ~~ikVaInGfGrIGR-~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~ 163 (269)
|++||||+|+|.||+ .+++.|... +.++++ |-|. +.+....+.+ .+|. . ..+
T Consensus 1 m~~~igiIG~G~ig~~~~~~~l~~~--~~~~l~-v~d~-~~~~~~~~a~---~~g~---~-----------------~~~ 53 (323)
T 1xea_A 1 MSLKIAMIGLGDIAQKAYLPVLAQW--PDIELV-LCTR-NPKVLGTLAT---RYRV---S-----------------ATC 53 (323)
T ss_dssp -CEEEEEECCCHHHHHTHHHHHTTS--TTEEEE-EECS-CHHHHHHHHH---HTTC---C-----------------CCC
T ss_pred CCcEEEEECCCHHHHHHHHHHHHhC--CCceEE-EEeC-CHHHHHHHHH---HcCC---C-----------------ccc
Confidence 457999999999998 488888653 357888 7776 3333222211 1110 0 000
Q ss_pred cCCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecC
Q 024349 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (269)
Q Consensus 164 ~~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP 209 (269)
....+.+ +.++|+|+.||+...-.+.+...+++|. .|++--|
T Consensus 54 ~~~~~~l---~~~~D~V~i~tp~~~h~~~~~~al~~Gk-~V~~EKP 95 (323)
T 1xea_A 54 TDYRDVL---QYGVDAVMIHAATDVHSTLAAFFLHLGI-PTFVDKP 95 (323)
T ss_dssp SSTTGGG---GGCCSEEEECSCGGGHHHHHHHHHHTTC-CEEEESC
T ss_pred cCHHHHh---hcCCCEEEEECCchhHHHHHHHHHHCCC-eEEEeCC
Confidence 1112223 2378999999998888888888889885 3565444
No 87
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=96.11 E-value=0.0087 Score=56.79 Aligned_cols=100 Identities=17% Similarity=0.145 Sum_probs=62.4
Q ss_pred ceeeEEEEcCChHHH-HHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEe
Q 024349 85 AKLKVAINGFGRIGR-NFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (269)
Q Consensus 85 ~~ikVaInGfGrIGR-~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~ 163 (269)
.++||||+|+|+||+ .+++.+.+. +.+++++|-|. +.+....+.+ .||.-... +.+
T Consensus 82 ~~irigiIG~G~~g~~~~~~~l~~~--~~~~lvav~d~-~~~~~~~~a~---~~g~~~~~---------------~~~-- 138 (433)
T 1h6d_A 82 RRFGYAIVGLGKYALNQILPGFAGC--QHSRIEALVSG-NAEKAKIVAA---EYGVDPRK---------------IYD-- 138 (433)
T ss_dssp CCEEEEEECCSHHHHHTHHHHTTTC--SSEEEEEEECS-CHHHHHHHHH---HTTCCGGG---------------EEC--
T ss_pred CceEEEEECCcHHHHHHHHHHHhhC--CCcEEEEEEcC-CHHHHHHHHH---HhCCCccc---------------ccc--
Confidence 458999999999997 788887653 35899999887 3333221111 11110000 111
Q ss_pred cCCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecC
Q 024349 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (269)
Q Consensus 164 ~~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP 209 (269)
..+.+++- .+.++|+|+.||......+.+...+++|. .|++--|
T Consensus 139 ~~~~~~ll-~~~~vD~V~iatp~~~h~~~~~~al~aGk-~Vl~EKP 182 (433)
T 1h6d_A 139 YSNFDKIA-KDPKIDAVYIILPNSLHAEFAIRAFKAGK-HVMCEKP 182 (433)
T ss_dssp SSSGGGGG-GCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEECSS
T ss_pred cCCHHHHh-cCCCCCEEEEcCCchhHHHHHHHHHHCCC-cEEEcCC
Confidence 12233321 12368999999999888888889999985 4666444
No 88
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=96.07 E-value=0.0054 Score=59.55 Aligned_cols=107 Identities=17% Similarity=0.305 Sum_probs=60.7
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecC-CeEE---ECCEEEE
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDN-ETIS---VDGKLIK 160 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~-~~L~---inGk~I~ 160 (269)
+++||||+|+|+||+.+++.+... +.+++++|.|. +++.....++ ..||. ...+...++ ..+. -.| .+.
T Consensus 22 k~IRVGIIGaG~iG~~~~~~l~~~--~~veLvAV~D~-~~era~~~a~--~~yG~-~~~~~~~~~~~~i~~a~~~g-~~~ 94 (446)
T 3upl_A 22 KPIRIGLIGAGEMGTDIVTQVARM--QGIEVGALSAR-RLPNTFKAIR--TAYGD-EENAREATTESAMTRAIEAG-KIA 94 (446)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTS--SSEEEEEEECS-STHHHHHHHH--HHHSS-STTEEECSSHHHHHHHHHTT-CEE
T ss_pred CceEEEEECChHHHHHHHHHHhhC--CCcEEEEEEeC-CHHHHHHHHH--HhcCC-ccccccccchhhhhhhhccC-Cce
Confidence 468999999999999999887643 56999999987 4444332221 00121 001110000 0000 001 122
Q ss_pred EEecCCCCCCCCCCCCccEEEEcCCCC-CChhhHHHHHHcCC
Q 024349 161 VVSNRDPLQLPWAELGIDIVIEGTGVF-VDGPGAGKHIQAGA 201 (269)
Q Consensus 161 V~~~~~P~~i~w~~~gvDiVve~TG~f-~~~e~a~~Hl~aGa 201 (269)
++ .|.+++ ..+.++|+|++|||.. ...+.+...+++|.
T Consensus 95 v~--~D~eeL-L~d~dIDaVviaTp~p~~H~e~a~~AL~AGK 133 (446)
T 3upl_A 95 VT--DDNDLI-LSNPLIDVIIDATGIPEVGAETGIAAIRNGK 133 (446)
T ss_dssp EE--SCHHHH-HTCTTCCEEEECSCCHHHHHHHHHHHHHTTC
T ss_pred EE--CCHHHH-hcCCCCCEEEEcCCChHHHHHHHHHHHHcCC
Confidence 22 233222 1223799999999863 44677888888886
No 89
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=96.05 E-value=0.01 Score=53.78 Aligned_cols=98 Identities=20% Similarity=0.217 Sum_probs=60.7
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhC-----CCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEE
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGR-----KDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLI 159 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r-----~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I 159 (269)
+++||||+|+|+||+.-++++... ..+.+++|+|.|. +.+.+..+.+ .||- . .
T Consensus 24 kkirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~-~~~~a~~~a~---~~g~---~-~-------------- 81 (393)
T 4fb5_A 24 KPLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEA-NAGLAEARAG---EFGF---E-K-------------- 81 (393)
T ss_dssp CCCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC---TTHHHHHH---HHTC---S-E--------------
T ss_pred CCccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECC-CHHHHHHHHH---HhCC---C-e--------------
Confidence 468999999999999877765321 1245799999987 4443332221 1110 0 0
Q ss_pred EEEecCCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecC
Q 024349 160 KVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (269)
Q Consensus 160 ~V~~~~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP 209 (269)
++ .|.+++ ..+.++|.|+=||....-.+.+...+++|. -|++=-|
T Consensus 82 -~y--~d~~el-l~~~~iDaV~IatP~~~H~~~a~~al~aGk-hVl~EKP 126 (393)
T 4fb5_A 82 -AT--ADWRAL-IADPEVDVVSVTTPNQFHAEMAIAALEAGK-HVWCEKP 126 (393)
T ss_dssp -EE--SCHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEECSC
T ss_pred -ec--CCHHHH-hcCCCCcEEEECCChHHHHHHHHHHHhcCC-eEEEccC
Confidence 11 111111 012368999999999999999999999986 4566444
No 90
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=95.94 E-value=0.0034 Score=56.63 Aligned_cols=96 Identities=22% Similarity=0.271 Sum_probs=56.1
Q ss_pred eeeEEEEcC-ChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEec
Q 024349 86 KLKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (269)
Q Consensus 86 ~ikVaInGf-GrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~ 164 (269)
++||+|+|. |++||.+++.+.+.+ +++++++-|..+ +. +.-.| .|.+.+- .. .| +.+.
T Consensus 5 ~mkV~V~Ga~G~mG~~~~~~~~~~~--~~elva~~d~~~-~~---~~g~d--~~~~~g~----~~-----~~--v~~~-- 63 (273)
T 1dih_A 5 NIRVAIAGAGGRMGRQLIQAALALE--GVQLGAALEREG-SS---LLGSD--AGELAGA----GK-----TG--VTVQ-- 63 (273)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHST--TEECCCEECCTT-CT---TCSCC--TTCSSSS----SC-----CS--CCEE--
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCC--CCEEEEEEecCc-hh---hhhhh--HHHHcCC----Cc-----CC--ceec--
Confidence 479999996 999999999887653 478887765411 10 00001 0111000 00 01 2222
Q ss_pred CCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEE
Q 024349 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVII 206 (269)
Q Consensus 165 ~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVII 206 (269)
.+.+++- .++|+|||+|......+.+...+++|.. ||+
T Consensus 64 ~dl~~~l---~~~DvVIDft~p~~~~~~~~~a~~~G~~-vVi 101 (273)
T 1dih_A 64 SSLDAVK---DDFDVFIDFTRPEGTLNHLAFCRQHGKG-MVI 101 (273)
T ss_dssp SCSTTTT---TSCSEEEECSCHHHHHHHHHHHHHTTCE-EEE
T ss_pred CCHHHHh---cCCCEEEEcCChHHHHHHHHHHHhCCCC-EEE
Confidence 3444332 1689999988776666777778888875 555
No 91
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=95.91 E-value=0.012 Score=55.84 Aligned_cols=102 Identities=19% Similarity=0.191 Sum_probs=64.0
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCCCCccccccccc-ccccccccCceEEEecCCeEEECCEEEEEEe
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLK-YDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~Llk-yDS~hG~f~g~v~~~~~~~L~inGk~I~V~~ 163 (269)
+++||||+|+|.||+..++.+... +.+++++|-|. +.+.+..+.+ +. .+|- + . ..++.
T Consensus 19 ~~~rvgiIG~G~~g~~h~~~l~~~--~~~~lvav~d~-~~~~~~~~a~~~~-~~g~-~-~---------------~~~~~ 77 (444)
T 2ixa_A 19 KKVRIAFIAVGLRGQTHVENMARR--DDVEIVAFADP-DPYMVGRAQEILK-KNGK-K-P---------------AKVFG 77 (444)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTC--TTEEEEEEECS-CHHHHHHHHHHHH-HTTC-C-C---------------CEEEC
T ss_pred CCceEEEEecCHHHHHHHHHHHhC--CCcEEEEEEeC-CHHHHHHHHHHHH-hcCC-C-C---------------Cceec
Confidence 358999999999999999988754 45899999987 4443322211 00 0110 0 0 01111
Q ss_pred --cCCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecC
Q 024349 164 --NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (269)
Q Consensus 164 --~~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP 209 (269)
..+.+++ ..+..+|+|+.||....-.+.+.+.+++|. -|++--|
T Consensus 78 ~~~~~~~~l-l~~~~vD~V~i~tp~~~h~~~~~~al~aGk-hV~~EKP 123 (444)
T 2ixa_A 78 NGNDDYKNM-LKDKNIDAVFVSSPWEWHHEHGVAAMKAGK-IVGMEVS 123 (444)
T ss_dssp SSTTTHHHH-TTCTTCCEEEECCCGGGHHHHHHHHHHTTC-EEEECCC
T ss_pred cCCCCHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCCC-eEEEeCC
Confidence 0122222 112368999999999988899999999985 5666444
No 92
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=95.87 E-value=0.0079 Score=55.34 Aligned_cols=95 Identities=16% Similarity=0.220 Sum_probs=61.7
Q ss_pred eeeEEEEcCChHHHH-HHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEec
Q 024349 86 KLKVAINGFGRIGRN-FLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (269)
Q Consensus 86 ~ikVaInGfGrIGR~-llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~ 164 (269)
++||||+|+|.||+. +++.+.+. +++++++|-|. +.+.+..+.+ .+| +. .++
T Consensus 5 ~~rigiIG~G~~g~~~~~~~l~~~--~~~~l~av~d~-~~~~~~~~a~---~~~---~~----------------~~~-- 57 (359)
T 3m2t_A 5 LIKVGLVGIGAQMQENLLPSLLQM--QDIRIVAACDS-DLERARRVHR---FIS---DI----------------PVL-- 57 (359)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTC--TTEEEEEEECS-SHHHHGGGGG---TSC---SC----------------CEE--
T ss_pred cceEEEECCCHHHHHHHHHHHHhC--CCcEEEEEEcC-CHHHHHHHHH---hcC---CC----------------ccc--
Confidence 489999999999995 88988754 35899999887 4443322221 011 00 011
Q ss_pred CCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecC
Q 024349 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (269)
Q Consensus 165 ~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP 209 (269)
.+.+++- .+.++|+|+-||....-.+.+...+++|. .|++--|
T Consensus 58 ~~~~~ll-~~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~EKP 100 (359)
T 3m2t_A 58 DNVPAML-NQVPLDAVVMAGPPQLHFEMGLLAMSKGV-NVFVEKP 100 (359)
T ss_dssp SSHHHHH-HHSCCSEEEECSCHHHHHHHHHHHHHTTC-EEEECSC
T ss_pred CCHHHHh-cCCCCCEEEEcCCcHHHHHHHHHHHHCCC-eEEEECC
Confidence 1222210 11368999999998888888889999984 4666555
No 93
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=95.84 E-value=0.004 Score=57.80 Aligned_cols=95 Identities=15% Similarity=0.163 Sum_probs=62.5
Q ss_pred ceeeEEEEcCC-hHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEe
Q 024349 85 AKLKVAINGFG-RIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (269)
Q Consensus 85 ~~ikVaInGfG-rIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~ 163 (269)
|++||||+|+| ++|+..++.+... +.+++++|-|. +.+....+.+ .||- .++
T Consensus 1 ~~~rigiiG~G~~~~~~~~~~l~~~--~~~~l~av~d~-~~~~~~~~a~---~~g~--------------------~~~- 53 (387)
T 3moi_A 1 MKIRFGICGLGFAGSVLMAPAMRHH--PDAQIVAACDP-NEDVRERFGK---EYGI--------------------PVF- 53 (387)
T ss_dssp CCEEEEEECCSHHHHTTHHHHHHHC--TTEEEEEEECS-CHHHHHHHHH---HHTC--------------------CEE-
T ss_pred CceEEEEEeCCHHHHHHHHHHHHhC--CCeEEEEEEeC-CHHHHHHHHH---HcCC--------------------CeE-
Confidence 45899999999 9999999988764 35899999887 3333221111 1110 011
Q ss_pred cCCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecC
Q 024349 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (269)
Q Consensus 164 ~~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP 209 (269)
.+.+++- .+..+|+|+-||......+.+...+++| |.|++--|
T Consensus 54 -~~~~ell-~~~~vD~V~i~tp~~~H~~~~~~al~aG-k~Vl~EKP 96 (387)
T 3moi_A 54 -ATLAEMM-QHVQMDAVYIASPHQFHCEHVVQASEQG-LHIIVEKP 96 (387)
T ss_dssp -SSHHHHH-HHSCCSEEEECSCGGGHHHHHHHHHHTT-CEEEECSC
T ss_pred -CCHHHHH-cCCCCCEEEEcCCcHHHHHHHHHHHHCC-CceeeeCC
Confidence 1222210 1126899999999988888899999999 45666555
No 94
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=95.82 E-value=0.0096 Score=53.17 Aligned_cols=92 Identities=12% Similarity=0.114 Sum_probs=60.8
Q ss_pred eeeEEEEcCChHHHH-HHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEec
Q 024349 86 KLKVAINGFGRIGRN-FLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (269)
Q Consensus 86 ~ikVaInGfGrIGR~-llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~ 164 (269)
++||||+|+|.||+. +++.+... +++++++|-|. +.+....+.+ .||- . . +
T Consensus 6 ~~~igiIG~G~~g~~~~~~~l~~~--~~~~l~av~d~-~~~~~~~~a~---~~~~---~-----------------~-~- 57 (308)
T 3uuw_A 6 NIKMGMIGLGSIAQKAYLPILTKS--ERFEFVGAFTP-NKVKREKICS---DYRI---M-----------------P-F- 57 (308)
T ss_dssp CCEEEEECCSHHHHHHTHHHHTSC--SSSEEEEEECS-CHHHHHHHHH---HHTC---C-----------------B-C-
T ss_pred cCcEEEEecCHHHHHHHHHHHHhC--CCeEEEEEECC-CHHHHHHHHH---HcCC---C-----------------C-c-
Confidence 579999999999996 88887653 45899999887 4433322211 1110 0 0 0
Q ss_pred CCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecC
Q 024349 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (269)
Q Consensus 165 ~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP 209 (269)
.+.+++- + ++|+|+-||......+.+...+++|. .|++--|
T Consensus 58 ~~~~~ll--~-~~D~V~i~tp~~~h~~~~~~al~~gk-~vl~EKP 98 (308)
T 3uuw_A 58 DSIESLA--K-KCDCIFLHSSTETHYEIIKILLNLGV-HVYVDKP 98 (308)
T ss_dssp SCHHHHH--T-TCSEEEECCCGGGHHHHHHHHHHTTC-EEEECSS
T ss_pred CCHHHHH--h-cCCEEEEeCCcHhHHHHHHHHHHCCC-cEEEcCC
Confidence 1222211 1 68999999999988899999999985 4666545
No 95
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=95.73 E-value=0.0093 Score=54.38 Aligned_cols=97 Identities=21% Similarity=0.232 Sum_probs=63.6
Q ss_pred ceeeEEEEcCC-hHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEe
Q 024349 85 AKLKVAINGFG-RIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (269)
Q Consensus 85 ~~ikVaInGfG-rIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~ 163 (269)
.++||||+|+| .+|+..++.+... .+.+++++|-|. +.+....+.+ .||. . .++
T Consensus 17 ~~irvgiIG~G~~~g~~~~~~l~~~-~~~~~lvav~d~-~~~~~~~~a~---~~~~----~---------------~~~- 71 (340)
T 1zh8_A 17 RKIRLGIVGCGIAARELHLPALKNL-SHLFEITAVTSR-TRSHAEEFAK---MVGN----P---------------AVF- 71 (340)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHTT-TTTEEEEEEECS-SHHHHHHHHH---HHSS----C---------------EEE-
T ss_pred CceeEEEEecCHHHHHHHHHHHHhC-CCceEEEEEEcC-CHHHHHHHHH---HhCC----C---------------ccc-
Confidence 46899999999 8999999988753 145899999987 4443322221 1110 0 111
Q ss_pred cCCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecC
Q 024349 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (269)
Q Consensus 164 ~~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP 209 (269)
.|.+++ ..+.++|+|+-||+...-.+.+...+++|. -|++--|
T Consensus 72 -~~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~EKP 114 (340)
T 1zh8_A 72 -DSYEEL-LESGLVDAVDLTLPVELNLPFIEKALRKGV-HVICEKP 114 (340)
T ss_dssp -SCHHHH-HHSSCCSEEEECCCGGGHHHHHHHHHHTTC-EEEEESS
T ss_pred -CCHHHH-hcCCCCCEEEEeCCchHHHHHHHHHHHCCC-cEEEeCC
Confidence 111111 011268999999999888899999999994 5776555
No 96
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=95.59 E-value=0.0068 Score=55.30 Aligned_cols=87 Identities=22% Similarity=0.201 Sum_probs=60.0
Q ss_pred eeeEEEEcCChHHH-HHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEec
Q 024349 86 KLKVAINGFGRIGR-NFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (269)
Q Consensus 86 ~ikVaInGfGrIGR-~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~ 164 (269)
++||||+|+|.||+ ..++.+.+. +++++++|.|. +.+. + | ++++
T Consensus 25 ~~rvgiiG~G~ig~~~~~~~l~~~--~~~~lvav~d~-~~~~------~----------------------g--~~~~-- 69 (330)
T 4ew6_A 25 PINLAIVGVGKIVRDQHLPSIAKN--ANFKLVATASR-HGTV------E----------------------G--VNSY-- 69 (330)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHHC--TTEEEEEEECS-SCCC------T----------------------T--SEEE--
T ss_pred CceEEEEecCHHHHHHHHHHHHhC--CCeEEEEEEeC-Chhh------c----------------------C--CCcc--
Confidence 58999999999999 789988765 45899999886 2110 0 0 0111
Q ss_pred CCCCCCCCCC-CCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecC
Q 024349 165 RDPLQLPWAE-LGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (269)
Q Consensus 165 ~~P~~i~w~~-~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP 209 (269)
.+.+++- .+ .++|+|+-||....-.+.+.+.+++| |.|++--|
T Consensus 70 ~~~~~ll-~~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~EKP 113 (330)
T 4ew6_A 70 TTIEAML-DAEPSIDAVSLCMPPQYRYEAAYKALVAG-KHVFLEKP 113 (330)
T ss_dssp SSHHHHH-HHCTTCCEEEECSCHHHHHHHHHHHHHTT-CEEEECSS
T ss_pred CCHHHHH-hCCCCCCEEEEeCCcHHHHHHHHHHHHcC-CcEEEeCC
Confidence 1122110 11 26899999999888888999999999 56776555
No 97
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=95.53 E-value=0.018 Score=50.65 Aligned_cols=98 Identities=20% Similarity=0.247 Sum_probs=61.1
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCCCCcc-cccccccccccccccCceEEEecCCeEEECCEEEEEEec
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVK-NASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~~~~~-~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~ 164 (269)
..+|+|+|.|..|+.+++.+. +...++++|++=|. +++ .. |+ . .++| ++|..-
T Consensus 84 ~~~V~IvGaG~lG~aLa~~~~-~~~~g~~iVg~~D~-dp~~ki----------G~-----~-------~i~G--vpV~~~ 137 (212)
T 3keo_A 84 TTNVMLVGCGNIGRALLHYRF-HDRNKMQISMAFDL-DSNDLV----------GK-----T-------TEDG--IPVYGI 137 (212)
T ss_dssp CEEEEEECCSHHHHHHTTCCC-CTTSSEEEEEEEEC-TTSTTT----------TC-----B-------CTTC--CBEEEG
T ss_pred CCEEEEECcCHHHHHHHHhhh-cccCCeEEEEEEeC-Cchhcc----------Cc-----e-------eECC--eEEeCH
Confidence 368999999999999988642 22346888888665 332 21 11 0 0223 223322
Q ss_pred CCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecCC
Q 024349 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA 210 (269)
Q Consensus 165 ~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP~ 210 (269)
.+.+++ -.++++|+++-|++.....+-+..-.++|.+-++--+|.
T Consensus 138 ~dL~~~-v~~~~Id~vIIAvPs~~aq~v~d~lv~~GIk~I~nFap~ 182 (212)
T 3keo_A 138 STINDH-LIDSDIETAILTVPSTEAQEVADILVKAGIKGILSFSPV 182 (212)
T ss_dssp GGHHHH-C-CCSCCEEEECSCGGGHHHHHHHHHHHTCCEEEECSSS
T ss_pred HHHHHH-HHHcCCCEEEEecCchhHHHHHHHHHHcCCCEEEEcCCc
Confidence 222111 124589999999988766677777788999886656664
No 98
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=95.42 E-value=0.032 Score=50.02 Aligned_cols=91 Identities=20% Similarity=0.207 Sum_probs=59.1
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCC-CCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEe
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRK-DSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~-~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~ 163 (269)
+++||||+|+|.||+..++.+.... ...+++++|.+... .+ ..+ | +. +
T Consensus 6 ~~~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~~~---~a------~~~------------------g--~~--~ 54 (294)
T 1lc0_A 6 GKFGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRRE---LG------SLD------------------E--VR--Q 54 (294)
T ss_dssp CSEEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSSC---CC------EET------------------T--EE--B
T ss_pred CcceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECchH---HH------HHc------------------C--CC--C
Confidence 4589999999999999888875410 23578888877510 00 000 1 01 1
Q ss_pred cCCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecC
Q 024349 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (269)
Q Consensus 164 ~~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP 209 (269)
.+.+++- .+.++|+|+.||+...-.+.+...+++|. -|++--|
T Consensus 55 -~~~~ell-~~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~EKP 97 (294)
T 1lc0_A 55 -ISLEDAL-RSQEIDVAYICSESSSHEDYIRQFLQAGK-HVLVEYP 97 (294)
T ss_dssp -CCHHHHH-HCSSEEEEEECSCGGGHHHHHHHHHHTTC-EEEEESC
T ss_pred -CCHHHHh-cCCCCCEEEEeCCcHhHHHHHHHHHHCCC-cEEEeCC
Confidence 1222210 12378999999999888899999999985 5666444
No 99
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=95.40 E-value=0.0059 Score=55.28 Aligned_cols=97 Identities=18% Similarity=0.175 Sum_probs=62.0
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCC-----CCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEE
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRK-----DSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIK 160 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~-----~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~ 160 (269)
++||||+|+|.||+.-++.+...+ ....++++|.|. +.+.+..+.+ .||- . +
T Consensus 6 klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~-~~~~a~~~a~---~~g~---~----------------~ 62 (390)
T 4h3v_A 6 NLGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGR-DAEAVRAAAG---KLGW---S----------------T 62 (390)
T ss_dssp EEEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECS-SHHHHHHHHH---HHTC---S----------------E
T ss_pred cCcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcC-CHHHHHHHHH---HcCC---C----------------c
Confidence 589999999999998887765321 112489999987 4444332221 1110 0 0
Q ss_pred EEecCCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecC
Q 024349 161 VVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (269)
Q Consensus 161 V~~~~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP 209 (269)
++ .|.+++ ..+.++|+|+=||....-.+.+...+++|. -|++=-|
T Consensus 63 ~~--~d~~~l-l~~~~iDaV~I~tP~~~H~~~~~~al~aGk-hVl~EKP 107 (390)
T 4h3v_A 63 TE--TDWRTL-LERDDVQLVDVCTPGDSHAEIAIAALEAGK-HVLCEKP 107 (390)
T ss_dssp EE--SCHHHH-TTCTTCSEEEECSCGGGHHHHHHHHHHTTC-EEEEESS
T ss_pred cc--CCHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHcCC-CceeecC
Confidence 11 122221 112378999999999999999999999994 6776555
No 100
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=95.26 E-value=0.024 Score=50.78 Aligned_cols=93 Identities=18% Similarity=0.195 Sum_probs=57.7
Q ss_pred eeEEEEcCChHHHHH-HHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEecC
Q 024349 87 LKVAINGFGRIGRNF-LRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (269)
Q Consensus 87 ikVaInGfGrIGR~l-lR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~~ 165 (269)
+||||+|+|.+|+.+ ++.+.+ . .+++++|-|. +.+....+.+ .+|. . . ++ .
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~-~--~~~~vav~d~-~~~~~~~~~~---~~g~---~-~---------------~~--~ 52 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRA-T--GGEVVSMMST-SAERGAAYAT---ENGI---G-K---------------SV--T 52 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHH-T--TCEEEEEECS-CHHHHHHHHH---HTTC---S-C---------------CB--S
T ss_pred CeEEEEcccHHHHHhhhHHhhc-C--CCeEEEEECC-CHHHHHHHHH---HcCC---C-c---------------cc--C
Confidence 489999999999997 788776 3 4899999876 3333322211 1110 0 0 00 1
Q ss_pred CCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecC
Q 024349 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (269)
Q Consensus 166 ~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP 209 (269)
+.+++ ..+.++|+|+.||......+.+...+++|. .|++--|
T Consensus 53 ~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~Gk-~v~~ekP 94 (332)
T 2glx_A 53 SVEEL-VGDPDVDAVYVSTTNELHREQTLAAIRAGK-HVLCEKP 94 (332)
T ss_dssp CHHHH-HTCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEECSS
T ss_pred CHHHH-hcCCCCCEEEEeCChhHhHHHHHHHHHCCC-eEEEeCC
Confidence 11111 011268999999998888888888888884 4565444
No 101
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=94.85 E-value=0.061 Score=48.64 Aligned_cols=94 Identities=17% Similarity=0.248 Sum_probs=61.8
Q ss_pred eeeEEEEcC-ChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEec
Q 024349 86 KLKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (269)
Q Consensus 86 ~ikVaInGf-GrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~ 164 (269)
|+||||+|+ |.||+..++.+.+. +.++++|-|. +.+. +.+ +..+ .+ + +++
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~---~~~lvav~d~-~~~~-~~~---~~~~---~~-~---------------~~~-- 53 (312)
T 3o9z_A 3 MTRFALTGLAGYIAPRHLKAIKEV---GGVLVASLDP-ATNV-GLV---DSFF---PE-A---------------EFF-- 53 (312)
T ss_dssp CCEEEEECTTSSSHHHHHHHHHHT---TCEEEEEECS-SCCC-GGG---GGTC---TT-C---------------EEE--
T ss_pred ceEEEEECCChHHHHHHHHHHHhC---CCEEEEEEcC-CHHH-HHH---HhhC---CC-C---------------cee--
Confidence 479999999 79999999998764 3799999987 3322 111 1111 10 0 111
Q ss_pred CCCCCCC-----C--CCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecC
Q 024349 165 RDPLQLP-----W--AELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (269)
Q Consensus 165 ~~P~~i~-----w--~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP 209 (269)
.+.+++. | .+..+|+|+-||....-.+.+...+++|. -|++--|
T Consensus 54 ~~~~~ll~~~~~l~~~~~~vD~V~I~tP~~~H~~~~~~al~aGk-hVl~EKP 104 (312)
T 3o9z_A 54 TEPEAFEAYLEDLRDRGEGVDYLSIASPNHLHYPQIRMALRLGA-NALSEKP 104 (312)
T ss_dssp SCHHHHHHHHHHHHHTTCCCSEEEECSCGGGHHHHHHHHHHTTC-EEEECSS
T ss_pred CCHHHHHHHhhhhcccCCCCcEEEECCCchhhHHHHHHHHHCCC-eEEEECC
Confidence 1121111 0 12478999999999999999999999994 5666555
No 102
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=94.72 E-value=0.0097 Score=54.01 Aligned_cols=96 Identities=11% Similarity=0.089 Sum_probs=59.7
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCCCC---cccccccccccccccccCceEEEecCCeEEECCEEEEE
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGG---VKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKV 161 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~~~---~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V 161 (269)
|++||||+|+|.+|+..++.+ . +.+++++|-|... .+..+..++ .||. .. ++
T Consensus 1 M~~rvgiiG~G~~~~~~~~~l--~--~~~~lvav~d~~~~~~~~~~~~~~~---~~~~---~~---------------~~ 55 (337)
T 3ip3_A 1 MSLKICVIGSSGHFRYALEGL--D--EECSITGIAPGVPEEDLSKLEKAIS---EMNI---KP---------------KK 55 (337)
T ss_dssp -CEEEEEECSSSCHHHHHTTC--C--TTEEEEEEECSSTTCCCHHHHHHHH---TTTC---CC---------------EE
T ss_pred CceEEEEEccchhHHHHHHhc--C--CCcEEEEEecCCchhhHHHHHHHHH---HcCC---CC---------------cc
Confidence 568999999999999888876 2 4689999998721 122221110 0110 00 11
Q ss_pred EecCCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecC
Q 024349 162 VSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (269)
Q Consensus 162 ~~~~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP 209 (269)
+ .|.+++ ..+.++|+|+-||....-.+.+...+++|. .|++--|
T Consensus 56 ~--~~~~~l-l~~~~vD~V~I~tp~~~H~~~~~~al~aGk-hVl~EKP 99 (337)
T 3ip3_A 56 Y--NNWWEM-LEKEKPDILVINTVFSLNGKILLEALERKI-HAFVEKP 99 (337)
T ss_dssp C--SSHHHH-HHHHCCSEEEECSSHHHHHHHHHHHHHTTC-EEEECSS
T ss_pred c--CCHHHH-hcCCCCCEEEEeCCcchHHHHHHHHHHCCC-cEEEeCC
Confidence 1 122221 011368999999998888888889999995 4666555
No 103
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=94.71 E-value=0.067 Score=48.48 Aligned_cols=94 Identities=17% Similarity=0.144 Sum_probs=62.1
Q ss_pred eeeEEEEcC-ChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEec
Q 024349 86 KLKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (269)
Q Consensus 86 ~ikVaInGf-GrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~ 164 (269)
|+||||+|+ |.||+..++.+.+. +.++++|-|. +.+. +. .+..+ .+. +++
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~---~~~lvav~d~-~~~~-~~---~~~~~---~~~----------------~~~-- 53 (318)
T 3oa2_A 3 MKNFALIGAAGYIAPRHMRAIKDT---GNCLVSAYDI-NDSV-GI---IDSIS---PQS----------------EFF-- 53 (318)
T ss_dssp CCEEEEETTTSSSHHHHHHHHHHT---TCEEEEEECS-SCCC-GG---GGGTC---TTC----------------EEE--
T ss_pred ceEEEEECCCcHHHHHHHHHHHhC---CCEEEEEEcC-CHHH-HH---HHhhC---CCC----------------cEE--
Confidence 479999999 79999999998764 4799999987 2222 11 11111 110 111
Q ss_pred CCCCCCC--------CCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecC
Q 024349 165 RDPLQLP--------WAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (269)
Q Consensus 165 ~~P~~i~--------w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP 209 (269)
.+.+++. ..+.++|+|+-||....-.+.+...+++|. -|++--|
T Consensus 54 ~~~~~ll~~~~~l~~~~~~~vD~V~I~tP~~~H~~~~~~al~aGk-hVl~EKP 105 (318)
T 3oa2_A 54 TEFEFFLDHASNLKRDSATALDYVSICSPNYLHYPHIAAGLRLGC-DVICEKP 105 (318)
T ss_dssp SSHHHHHHHHHHHTTSTTTSCCEEEECSCGGGHHHHHHHHHHTTC-EEEECSS
T ss_pred CCHHHHHHhhhhhhhccCCCCcEEEECCCcHHHHHHHHHHHHCCC-eEEEECC
Confidence 1122110 023479999999999999999999999994 5676555
No 104
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=94.60 E-value=0.063 Score=46.93 Aligned_cols=94 Identities=17% Similarity=0.223 Sum_probs=57.4
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEecCC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRD 166 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~~~ 166 (269)
.+|+|+|.|.+|+.+++.+... ...+++|++-|. +++... -.++|-++ ....+
T Consensus 86 ~rV~IIGAG~~G~~La~~~~~~-~~g~~iVg~~D~-dp~k~g-----------------------~~i~gv~V--~~~~d 138 (215)
T 2vt3_A 86 TDVILIGVGNLGTAFLHYNFTK-NNNTKISMAFDI-NESKIG-----------------------TEVGGVPV--YNLDD 138 (215)
T ss_dssp -CEEEECCSHHHHHHHHCC-------CCEEEEEES-CTTTTT-----------------------CEETTEEE--EEGGG
T ss_pred CEEEEEccCHHHHHHHHHHhcc-cCCcEEEEEEeC-CHHHHH-----------------------hHhcCCee--echhh
Confidence 5899999999999999942211 235788888765 332111 11344333 22233
Q ss_pred CCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecCC
Q 024349 167 PLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA 210 (269)
Q Consensus 167 P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP~ 210 (269)
.+++- .+ . |+|+-|++.....+-+..-+++|++.++.-+|.
T Consensus 139 l~eli-~~-~-D~ViIAvPs~~~~ei~~~l~~aGi~~Ilnf~P~ 179 (215)
T 2vt3_A 139 LEQHV-KD-E-SVAILTVPAVAAQSITDRLVALGIKGILNFTPA 179 (215)
T ss_dssp HHHHC-SS-C-CEEEECSCHHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred HHHHH-Hh-C-CEEEEecCchhHHHHHHHHHHcCCCEEEEcCce
Confidence 33221 12 2 999999998766677777788999877777774
No 105
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=94.53 E-value=0.064 Score=48.35 Aligned_cols=94 Identities=17% Similarity=0.182 Sum_probs=58.2
Q ss_pred eeeEEEEcCChHHH-HHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEec
Q 024349 86 KLKVAINGFGRIGR-NFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (269)
Q Consensus 86 ~ikVaInGfGrIGR-~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~ 164 (269)
++||||+|+|.+|. .+++.+.. .++++++|-|. +.+....+.+ .|| + +. ++
T Consensus 4 ~~rvgiiG~G~~~~~~~~~~l~~---~~~~lvav~d~-~~~~~~~~a~---~~~---~-~~---------------~~-- 55 (336)
T 2p2s_A 4 KIRFAAIGLAHNHIYDMCQQLID---AGAELAGVFES-DSDNRAKFTS---LFP---S-VP---------------FA-- 55 (336)
T ss_dssp CCEEEEECCSSTHHHHHHHHHHH---TTCEEEEEECS-CTTSCHHHHH---HST---T-CC---------------BC--
T ss_pred ccEEEEECCChHHHHHhhhhhcC---CCcEEEEEeCC-CHHHHHHHHH---hcC---C-Cc---------------cc--
Confidence 57999999999996 56776643 35899999887 3333221111 110 0 00 00
Q ss_pred CCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecC
Q 024349 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (269)
Q Consensus 165 ~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP 209 (269)
.+.+++ ..+.++|+|+-||....-.+.+...+++|. -|++--|
T Consensus 56 ~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aGk-hVl~EKP 98 (336)
T 2p2s_A 56 ASAEQL-ITDASIDLIACAVIPCDRAELALRTLDAGK-DFFTAKP 98 (336)
T ss_dssp SCHHHH-HTCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEECSS
T ss_pred CCHHHH-hhCCCCCEEEEeCChhhHHHHHHHHHHCCC-cEEEeCC
Confidence 111111 011268999999999888888889999985 4666445
No 106
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=93.91 E-value=0.044 Score=50.45 Aligned_cols=94 Identities=12% Similarity=0.184 Sum_probs=59.7
Q ss_pred eeeEEEEcCChHHH-HHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEec
Q 024349 86 KLKVAINGFGRIGR-NFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (269)
Q Consensus 86 ~ikVaInGfGrIGR-~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~ 164 (269)
++||||+|+|++|. .+++.+.. +++++++|-|. +++....+.+ .||. .. ++
T Consensus 26 ~irvgiiG~G~~~~~~~~~~~~~---~~~~lvav~d~-~~~~a~~~a~---~~~~----~~---------------~~-- 77 (361)
T 3u3x_A 26 ELRFAAVGLNHNHIYGQVNCLLR---AGARLAGFHEK-DDALAAEFSA---VYAD----AR---------------RI-- 77 (361)
T ss_dssp CCEEEEECCCSTTHHHHHHHHHH---TTCEEEEEECS-CHHHHHHHHH---HSSS----CC---------------EE--
T ss_pred CcEEEEECcCHHHHHHHHHHhhc---CCcEEEEEEcC-CHHHHHHHHH---HcCC----Cc---------------cc--
Confidence 48999999999995 45666543 35899999987 4443322221 1110 00 11
Q ss_pred CCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecC
Q 024349 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (269)
Q Consensus 165 ~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP 209 (269)
.+.+++ ..+.++|+|+-||....-.+.+...+++|. -|++--|
T Consensus 78 ~~~~~l-l~~~~vD~V~I~tp~~~H~~~~~~al~aGk-hVl~EKP 120 (361)
T 3u3x_A 78 ATAEEI-LEDENIGLIVSAAVSSERAELAIRAMQHGK-DVLVDKP 120 (361)
T ss_dssp SCHHHH-HTCTTCCEEEECCCHHHHHHHHHHHHHTTC-EEEEESC
T ss_pred CCHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHCCC-eEEEeCC
Confidence 112111 012368999999999888889999999994 5676555
No 107
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=93.77 E-value=0.066 Score=50.30 Aligned_cols=98 Identities=21% Similarity=0.225 Sum_probs=59.0
Q ss_pred ceeeEEEEcCCh---HHHHHHHHHHhCCCCCceEEE-EcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEE
Q 024349 85 AKLKVAINGFGR---IGRNFLRCWHGRKDSPLDVVV-VNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIK 160 (269)
Q Consensus 85 ~~ikVaInGfGr---IGR~llR~l~~r~~~~l~iVa-Ind~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~ 160 (269)
+++||||+|+|+ ||+..++.+... +.+++++ |-|. +++....+.+ .+|- +.. .
T Consensus 36 ~~~rvgiiG~G~~~~ig~~h~~~~~~~--~~~~lva~v~d~-~~~~a~~~a~---~~g~-~~~-~--------------- 92 (417)
T 3v5n_A 36 KRIRLGMVGGGSGAFIGAVHRIAARLD--DHYELVAGALSS-TPEKAEASGR---ELGL-DPS-R--------------- 92 (417)
T ss_dssp CCEEEEEESCC--CHHHHHHHHHHHHT--SCEEEEEEECCS-SHHHHHHHHH---HHTC-CGG-G---------------
T ss_pred CcceEEEEcCCCchHHHHHHHHHHhhC--CCcEEEEEEeCC-CHHHHHHHHH---HcCC-Ccc-c---------------
Confidence 358999999999 999888877654 3589986 8776 4443322221 1110 000 0
Q ss_pred EEecCCCCCCCCCC-----CCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecC
Q 024349 161 VVSNRDPLQLPWAE-----LGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (269)
Q Consensus 161 V~~~~~P~~i~w~~-----~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP 209 (269)
++ .+.+++- .+ .++|+|+-||....-.+.+...+++|. -|++--|
T Consensus 93 ~~--~~~~~ll-~~~~~~~~~vD~V~I~tp~~~H~~~~~~al~aGk-hVl~EKP 142 (417)
T 3v5n_A 93 VY--SDFKEMA-IREAKLKNGIEAVAIVTPNHVHYAAAKEFLKRGI-HVICDKP 142 (417)
T ss_dssp BC--SCHHHHH-HHHHHCTTCCSEEEECSCTTSHHHHHHHHHTTTC-EEEEESS
T ss_pred cc--CCHHHHH-hcccccCCCCcEEEECCCcHHHHHHHHHHHhCCC-eEEEECC
Confidence 00 0111110 00 258999999999988888889999884 4666555
No 108
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=93.58 E-value=0.07 Score=49.91 Aligned_cols=37 Identities=24% Similarity=0.408 Sum_probs=30.8
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCC-CCCceEEEEcCC
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRK-DSPLDVVVVNDS 121 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~-~~~l~iVaInd~ 121 (269)
+++||||.|+|.||+.+++.+.+.. +.++++++|.+.
T Consensus 3 k~i~vgIiG~G~VG~~~~~~l~~~~~g~~~~vvaV~d~ 40 (358)
T 1ebf_A 3 KVVNVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEA 40 (358)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECS
T ss_pred ceEEEEEEecCHHHHHHHHHHHhcCCCCCEEEEEEEEC
Confidence 4689999999999999999998753 235899999874
No 109
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=93.53 E-value=0.044 Score=52.85 Aligned_cols=99 Identities=10% Similarity=0.146 Sum_probs=63.8
Q ss_pred eeeEEEEcC----ChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEE
Q 024349 86 KLKVAINGF----GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKV 161 (269)
Q Consensus 86 ~ikVaInGf----GrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V 161 (269)
++||||+|+ |.+|+..++.|... .+.+++++|-|. +.+....+.+ .||- + . +.+
T Consensus 39 ~irvgiIG~g~~GG~~g~~h~~~l~~~-~~~~~lvav~d~-~~~~a~~~a~---~~g~-~-~---------------~~~ 96 (479)
T 2nvw_A 39 PIRVGFVGLTSGKSWVAKTHFLAIQQL-SSQFQIVALYNP-TLKSSLQTIE---QLQL-K-H---------------ATG 96 (479)
T ss_dssp CEEEEEECCCSTTSHHHHTHHHHHHHT-TTTEEEEEEECS-CHHHHHHHHH---HTTC-T-T---------------CEE
T ss_pred cCEEEEEcccCCCCHHHHHHHHHHHhc-CCCeEEEEEEeC-CHHHHHHHHH---HcCC-C-c---------------cee
Confidence 589999999 99999999998764 135899999887 3333221211 1110 0 0 011
Q ss_pred EecCCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCC-----CEEEEecC
Q 024349 162 VSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGA-----KKVIITAP 209 (269)
Q Consensus 162 ~~~~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGa-----kkVIISAP 209 (269)
+ .+.+++- .+.++|+|+-||....-.+.+...+++|. |-|++--|
T Consensus 97 ~--~d~~ell-~~~~vD~V~I~tp~~~H~~~~~~al~aG~~~~~~khVl~EKP 146 (479)
T 2nvw_A 97 F--DSLESFA-QYKDIDMIVVSVKVPEHYEVVKNILEHSSQNLNLRYLYVEWA 146 (479)
T ss_dssp E--SCHHHHH-HCTTCSEEEECSCHHHHHHHHHHHHHHSSSCSSCCEEEEESS
T ss_pred e--CCHHHHh-cCCCCCEEEEcCCcHHHHHHHHHHHHCCCCcCCceeEEEeCC
Confidence 1 1222210 11268999999998888888889999994 67887555
No 110
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=93.36 E-value=0.16 Score=43.65 Aligned_cols=33 Identities=12% Similarity=0.097 Sum_probs=26.6
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
|++||.|-|.|.||+.+++.|.++. .+|+++..
T Consensus 4 m~~~ilVtGaG~iG~~l~~~L~~~g---~~V~~~~r 36 (286)
T 3ius_A 4 MTGTLLSFGHGYTARVLSRALAPQG---WRIIGTSR 36 (286)
T ss_dssp -CCEEEEETCCHHHHHHHHHHGGGT---CEEEEEES
T ss_pred CcCcEEEECCcHHHHHHHHHHHHCC---CEEEEEEc
Confidence 5679999999999999999998763 57766654
No 111
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=93.27 E-value=0.027 Score=53.40 Aligned_cols=99 Identities=9% Similarity=0.098 Sum_probs=63.8
Q ss_pred eeeEEEEcC----ChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEE
Q 024349 86 KLKVAINGF----GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKV 161 (269)
Q Consensus 86 ~ikVaInGf----GrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V 161 (269)
++||||+|+ |.+|+..++.|.... +.+++|+|-|. +.+....+.+ .||. . . +.+
T Consensus 20 ~irvgiIG~g~~gG~~g~~~~~~l~~~~-~~~~lvav~d~-~~~~~~~~a~---~~g~-~-~---------------~~~ 77 (438)
T 3btv_A 20 PIRVGFVGLNAAKGWAIKTHYPAILQLS-SQFQITALYSP-KIETSIATIQ---RLKL-S-N---------------ATA 77 (438)
T ss_dssp CEEEEEESCCTTSSSTTTTHHHHHHHTT-TTEEEEEEECS-SHHHHHHHHH---HTTC-T-T---------------CEE
T ss_pred CCEEEEEcccCCCChHHHHHHHHHHhcC-CCeEEEEEEeC-CHHHHHHHHH---HcCC-C-c---------------cee
Confidence 489999999 999999999987641 35899999887 3333221211 1111 0 0 011
Q ss_pred EecCCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCC-----CEEEEecC
Q 024349 162 VSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGA-----KKVIITAP 209 (269)
Q Consensus 162 ~~~~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGa-----kkVIISAP 209 (269)
+ .+.+++- .+..+|+|+.||....-.+.+...+++|. |.|++--|
T Consensus 78 ~--~~~~~ll-~~~~vD~V~i~tp~~~H~~~~~~al~aG~~~~~~khVl~EKP 127 (438)
T 3btv_A 78 F--PTLESFA-SSSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVEWA 127 (438)
T ss_dssp E--SSHHHHH-HCSSCSEEEECSCHHHHHHHHHHHHHHGGGCTTCCEEEEESS
T ss_pred e--CCHHHHh-cCCCCCEEEEeCCcHHHHHHHHHHHHCCCCcccceeEEecCc
Confidence 1 1222221 11268999999998888888889999994 66777555
No 112
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=93.04 E-value=0.21 Score=41.41 Aligned_cols=31 Identities=23% Similarity=0.472 Sum_probs=24.9
Q ss_pred eeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 87 ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
|||.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g---~~V~~~~R 32 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTD---YQIYAGAR 32 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSS---CEEEEEES
T ss_pred CeEEEECCCCHHHHHHHHHHHHCC---CEEEEEEC
Confidence 3799999 9999999999998752 57666643
No 113
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=92.77 E-value=0.13 Score=40.68 Aligned_cols=33 Identities=18% Similarity=0.316 Sum_probs=27.2
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
++.+|.|.|+|++|+.+++.|.++. .++++|..
T Consensus 6 ~~~~viIiG~G~~G~~la~~L~~~g---~~v~vid~ 38 (140)
T 3fwz_A 6 ICNHALLVGYGRVGSLLGEKLLASD---IPLVVIET 38 (140)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTT---CCEEEEES
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCC---CCEEEEEC
Confidence 4568999999999999999998753 68877764
No 114
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=92.63 E-value=0.62 Score=37.45 Aligned_cols=85 Identities=26% Similarity=0.352 Sum_probs=55.4
Q ss_pred ceeeEEEEcC----ChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEE
Q 024349 85 AKLKVAINGF----GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIK 160 (269)
Q Consensus 85 ~~ikVaInGf----GrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~ 160 (269)
.+.+|+|+|. |++|+.+++.|.+. .+++..+|.. ++. +.|. +
T Consensus 13 ~p~~IavIGaS~~~g~~G~~~~~~L~~~---G~~V~~vnp~-----------~~~------------------i~G~--~ 58 (138)
T 1y81_A 13 EFRKIALVGASKNPAKYGNIILKDLLSK---GFEVLPVNPN-----------YDE------------------IEGL--K 58 (138)
T ss_dssp -CCEEEEETCCSCTTSHHHHHHHHHHHT---TCEEEEECTT-----------CSE------------------ETTE--E
T ss_pred CCCeEEEEeecCCCCCHHHHHHHHHHHC---CCEEEEeCCC-----------CCe------------------ECCe--e
Confidence 3568999999 99999999998864 3577666532 010 1232 2
Q ss_pred EEecCCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEec
Q 024349 161 VVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITA 208 (269)
Q Consensus 161 V~~~~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISA 208 (269)
++ .++++++- .+|+|+-++......+-+..-+++|++.+++..
T Consensus 59 ~~--~s~~el~~---~vDlvii~vp~~~v~~v~~~~~~~g~~~i~~~~ 101 (138)
T 1y81_A 59 CY--RSVRELPK---DVDVIVFVVPPKVGLQVAKEAVEAGFKKLWFQP 101 (138)
T ss_dssp CB--SSGGGSCT---TCCEEEECSCHHHHHHHHHHHHHTTCCEEEECT
T ss_pred ec--CCHHHhCC---CCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 22 34555542 689999998865444555556677998877754
No 115
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=92.37 E-value=0.032 Score=51.37 Aligned_cols=89 Identities=21% Similarity=0.188 Sum_probs=51.4
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEecC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~~ 165 (269)
++||.|.|.|.+|+.+++.|.+. .++.++.++ .+.+..+-+ +. +.+.+ ...
T Consensus 16 ~mkilvlGaG~vG~~~~~~L~~~--~~v~~~~~~----~~~~~~~~~-------~~---------------~~~~~-d~~ 66 (365)
T 3abi_A 16 HMKVLILGAGNIGRAIAWDLKDE--FDVYIGDVN----NENLEKVKE-------FA---------------TPLKV-DAS 66 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTT--SEEEEEESC----HHHHHHHTT-------TS---------------EEEEC-CTT
T ss_pred ccEEEEECCCHHHHHHHHHHhcC--CCeEEEEcC----HHHHHHHhc-------cC---------------CcEEE-ecC
Confidence 46899999999999999988643 223322222 122111110 00 11111 112
Q ss_pred CCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCE
Q 024349 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKK 203 (269)
Q Consensus 166 ~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakk 203 (269)
|++.+.=--.+.|+||-|+|.+...+-+...+++|+.-
T Consensus 67 d~~~l~~~~~~~DvVi~~~p~~~~~~v~~~~~~~g~~y 104 (365)
T 3abi_A 67 NFDKLVEVMKEFELVIGALPGFLGFKSIKAAIKSKVDM 104 (365)
T ss_dssp CHHHHHHHHTTCSEEEECCCGGGHHHHHHHHHHHTCEE
T ss_pred CHHHHHHHHhCCCEEEEecCCcccchHHHHHHhcCcce
Confidence 22221110137899999999998888888888899843
No 116
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=92.30 E-value=0.082 Score=49.10 Aligned_cols=102 Identities=18% Similarity=0.067 Sum_probs=59.8
Q ss_pred ceeeEEEEcCCh---HHHHHHHHHHhCCCCCceEEE-EcCCCCcccccccc-cccccccccCceEEEecCCeEEECCEEE
Q 024349 85 AKLKVAINGFGR---IGRNFLRCWHGRKDSPLDVVV-VNDSGGVKNASHLL-KYDSLLGTFKADVKIVDNETISVDGKLI 159 (269)
Q Consensus 85 ~~ikVaInGfGr---IGR~llR~l~~r~~~~l~iVa-Ind~~~~~~~a~Ll-kyDS~hG~f~g~v~~~~~~~L~inGk~I 159 (269)
+++||||+|+|+ ||+..++.+... +.+++++ |-|. +++....+. +|.-..-+.-.+..
T Consensus 11 ~~~rvgiiG~G~~~~ig~~h~~~~~~~--~~~~lva~v~d~-~~~~a~~~a~~~g~~~~~~~~~~~-------------- 73 (398)
T 3dty_A 11 QPIRWAMVGGGSQSQIGYIHRCAALRD--NTFVLVAGAFDI-DPIRGSAFGEQLGVDSERCYADYL-------------- 73 (398)
T ss_dssp SCEEEEEEECCTTCSSHHHHHHHHHGG--GSEEEEEEECCS-SHHHHHHHHHHTTCCGGGBCSSHH--------------
T ss_pred CcceEEEEcCCccchhHHHHHHHHhhC--CCeEEEEEEeCC-CHHHHHHHHHHhCCCcceeeCCHH--------------
Confidence 358999999999 999888877643 3589987 7776 443332222 12100000000000
Q ss_pred EEEecCCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecC
Q 024349 160 KVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (269)
Q Consensus 160 ~V~~~~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP 209 (269)
.++. ++..- +.++|+|+-||....-.+.+...+++|. -|++--|
T Consensus 74 ~ll~--~~~~~---~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~EKP 117 (398)
T 3dty_A 74 SMFE--QEARR---ADGIQAVSIATPNGTHYSITKAALEAGL-HVVCEKP 117 (398)
T ss_dssp HHHH--HHTTC---TTCCSEEEEESCGGGHHHHHHHHHHTTC-EEEECSC
T ss_pred HHHh--ccccc---CCCCCEEEECCCcHHHHHHHHHHHHCCC-eEEEeCC
Confidence 0100 00000 0258999999999988899999999985 5666444
No 117
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=92.25 E-value=0.083 Score=48.48 Aligned_cols=33 Identities=15% Similarity=0.139 Sum_probs=27.1
Q ss_pred CccEEEEcCCCCCChhhHHHHHHcCCCEEEEecC
Q 024349 176 GIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (269)
Q Consensus 176 gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP 209 (269)
.+|+|+.||+...-.+.+...+++|. -|++=-|
T Consensus 83 ~iD~V~i~tp~~~h~~~~~~al~~Gk-~V~~EKP 115 (383)
T 3oqb_A 83 NDTMFFDAATTQARPGLLTQAINAGK-HVYCEKP 115 (383)
T ss_dssp SCCEEEECSCSSSSHHHHHHHHTTTC-EEEECSC
T ss_pred CCCEEEECCCchHHHHHHHHHHHCCC-eEEEcCC
Confidence 68999999999999999999999994 4665334
No 118
>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*
Probab=92.19 E-value=0.1 Score=49.81 Aligned_cols=32 Identities=22% Similarity=0.303 Sum_probs=26.5
Q ss_pred eeeEEEEcC-ChHHHHHHHHHHhCCCCCceEEEE
Q 024349 86 KLKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVV 118 (269)
Q Consensus 86 ~ikVaInGf-GrIGR~llR~l~~r~~~~l~iVaI 118 (269)
++||+|.|+ |.||+..++++.+.+ .+++++++
T Consensus 4 m~rI~ILGsTGSIG~~~l~vi~~~p-~~~~v~al 36 (388)
T 1r0k_A 4 PRTVTVLGATGSIGHSTLDLIERNL-DRYQVIAL 36 (388)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTG-GGEEEEEE
T ss_pred ceEEEEECCCeEeHHHHHHHHHhCc-CcEEEEEE
Confidence 379999996 999999999987653 34888877
No 119
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=92.10 E-value=0.49 Score=37.71 Aligned_cols=83 Identities=14% Similarity=0.057 Sum_probs=59.0
Q ss_pred eeeEEEEcC----ChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEE
Q 024349 86 KLKVAINGF----GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKV 161 (269)
Q Consensus 86 ~ikVaInGf----GrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V 161 (269)
+..|||+|. +++|..+++.|.+.. ++|..||-. ++.+ .|.+ .
T Consensus 4 p~siAVVGaS~~~~~~g~~v~~~L~~~g---~~V~pVnP~-----------~~~i------------------~G~~--~ 49 (122)
T 3ff4_A 4 MKKTLILGATPETNRYAYLAAERLKSHG---HEFIPVGRK-----------KGEV------------------LGKT--I 49 (122)
T ss_dssp CCCEEEETCCSCTTSHHHHHHHHHHHHT---CCEEEESSS-----------CSEE------------------TTEE--C
T ss_pred CCEEEEEccCCCCCCHHHHHHHHHHHCC---CeEEEECCC-----------CCcC------------------CCee--c
Confidence 457999994 889999999998753 588888842 2222 2221 1
Q ss_pred EecCCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEec
Q 024349 162 VSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITA 208 (269)
Q Consensus 162 ~~~~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISA 208 (269)
+ .+.+++| . +|+|+-++......+-+....+.|+|.|+++.
T Consensus 50 y--~sl~dlp---~-vDlavi~~p~~~v~~~v~e~~~~g~k~v~~~~ 90 (122)
T 3ff4_A 50 I--NERPVIE---G-VDTVTLYINPQNQLSEYNYILSLKPKRVIFNP 90 (122)
T ss_dssp B--CSCCCCT---T-CCEEEECSCHHHHGGGHHHHHHHCCSEEEECT
T ss_pred c--CChHHCC---C-CCEEEEEeCHHHHHHHHHHHHhcCCCEEEECC
Confidence 1 3455665 2 89999999888777888888888999877653
No 120
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=91.99 E-value=0.31 Score=45.58 Aligned_cols=140 Identities=20% Similarity=0.213 Sum_probs=78.9
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEec
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~ 164 (269)
.++||+|+|+| +|+.-++++.... ..+++|+|-+. +.+....+- ..|| ++++
T Consensus 6 ~~~rv~VvG~G-~g~~h~~a~~~~~-~~~elvav~~~-~~~~a~~~a---~~~g--------------------v~~~-- 57 (372)
T 4gmf_A 6 PKQRVLIVGAK-FGEMYLNAFMQPP-EGLELVGLLAQ-GSARSRELA---HAFG--------------------IPLY-- 57 (372)
T ss_dssp -CEEEEEECST-TTHHHHHTTSSCC-TTEEEEEEECC-SSHHHHHHH---HHTT--------------------CCEE--
T ss_pred CCCEEEEEehH-HHHHHHHHHHhCC-CCeEEEEEECC-CHHHHHHHH---HHhC--------------------CCEE--
Confidence 46899999999 7998888765432 35899999987 333322221 1111 1111
Q ss_pred CCCCCCCCCCCCccEEEEcCCCCCC----hhhHHHHHHcCCCEEEEecCC------------CCCCCCeEEeecCccccC
Q 024349 165 RDPLQLPWAELGIDIVIEGTGVFVD----GPGAGKHIQAGAKKVIITAPA------------KGADIPTYVVGVNEKDYD 228 (269)
Q Consensus 165 ~~P~~i~w~~~gvDiVve~TG~f~~----~e~a~~Hl~aGakkVIISAP~------------k~~Dip~iV~GVN~~~~~ 228 (269)
.+.+++. .++|+|+=+|....- .+.+.+.|++|. -|++=-|- +..++. +..|-|...+.
T Consensus 58 ~~~~~l~---~~~D~v~i~~p~~~h~~~~~~~a~~al~aGk-hVl~EKPl~~~ea~~l~~~A~~~g~~-~~v~~~yr~~p 132 (372)
T 4gmf_A 58 TSPEQIT---GMPDIACIVVRSTVAGGAGTQLARHFLARGV-HVIQEHPLHPDDISSLQTLAQEQGCC-YWINTFYPHTR 132 (372)
T ss_dssp SSGGGCC---SCCSEEEECCC--CTTSHHHHHHHHHHHTTC-EEEEESCCCHHHHHHHHHHHHHHTCC-EEEECSGGGSH
T ss_pred CCHHHHh---cCCCEEEEECCCcccchhHHHHHHHHHHcCC-cEEEecCCCHHHHHHHHHHHHHcCCE-EEEcCcccCCH
Confidence 2333442 257888888887765 567788888886 46664452 111222 33344432110
Q ss_pred ----------------CCCCceEEcCChhHHhHHHHHHHHhhhcCc
Q 024349 229 ----------------HEVANIVSNASCTTNCLAPFVKVMDEELGK 258 (269)
Q Consensus 229 ----------------~~~~~IISnaSCTTn~LaPvlkvL~d~fGI 258 (269)
...-..| .+.|...-+-|.+..|....|.
T Consensus 133 ~vr~~i~~~~~l~~~~~~~~~~i-~~~~s~q~~y~~~dil~~alg~ 177 (372)
T 4gmf_A 133 AGRTWLRDAQQLRRCLAKTPPVV-HATTSRQLLYSTLDLLLLALGV 177 (372)
T ss_dssp HHHHHHHHHHHHHHHHTSCCSEE-EEEECTTTHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHhhccCCceEE-EEEeccccccchHHHHHHhcCC
Confidence 0101223 3568888888888888776664
No 121
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=91.79 E-value=0.1 Score=45.04 Aligned_cols=31 Identities=10% Similarity=0.140 Sum_probs=23.8
Q ss_pred eeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 87 ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
|||.|-| .|.||+.+++.|.++.+ .+|+++.
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g--~~V~~~~ 32 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHI--DHFHIGV 32 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTC--TTEEEEE
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCC--CcEEEEE
Confidence 4799999 99999999999887522 4555554
No 122
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=91.76 E-value=0.33 Score=43.71 Aligned_cols=87 Identities=21% Similarity=0.092 Sum_probs=54.2
Q ss_pred eeeEEEEcC-ChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEec
Q 024349 86 KLKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (269)
Q Consensus 86 ~ikVaInGf-GrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~ 164 (269)
.+||+|+|+ |++|+..++.+.+. ++++|+.-++... | .. +.| ++++
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~~---g~~~V~~V~p~~~-------------g-----------~~--~~G--~~vy-- 53 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIAY---GTKMVGGVTPGKG-------------G-----------TT--HLG--LPVF-- 53 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHH---TCEEEEEECTTCT-------------T-----------CE--ETT--EEEE--
T ss_pred CCEEEEECCCChHHHHHHHHHHHC---CCeEEEEeCCCcc-------------c-----------ce--eCC--eecc--
Confidence 468999996 99999999988764 2566644333100 0 00 122 2232
Q ss_pred CCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEE
Q 024349 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVII 206 (269)
Q Consensus 165 ~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVII 206 (269)
.+.++++- +..+|+|+.+|......+.+...+++|++.+|+
T Consensus 54 ~sl~el~~-~~~~D~viI~tP~~~~~~~~~ea~~~Gi~~iVi 94 (288)
T 2nu8_A 54 NTVREAVA-ATGATASVIYVPAPFCKDSILEAIDAGIKLIIT 94 (288)
T ss_dssp SSHHHHHH-HHCCCEEEECCCGGGHHHHHHHHHHTTCSEEEE
T ss_pred CCHHHHhh-cCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEE
Confidence 12222221 125789999998888888888888889886454
No 123
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=91.07 E-value=0.28 Score=45.28 Aligned_cols=33 Identities=24% Similarity=0.334 Sum_probs=27.2
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~ 121 (269)
..+|||+|+|+||+.+++.|... .++|++.+..
T Consensus 137 gktvGIiGlG~IG~~vA~~l~~~---G~~V~~~dr~ 169 (324)
T 3evt_A 137 GQQLLIYGTGQIGQSLAAKASAL---GMHVIGVNTT 169 (324)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT---TCEEEEEESS
T ss_pred CCeEEEECcCHHHHHHHHHHHhC---CCEEEEECCC
Confidence 35899999999999999998764 3788888653
No 124
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=90.93 E-value=0.22 Score=46.47 Aligned_cols=31 Identities=32% Similarity=0.427 Sum_probs=26.0
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
.+|||+|+|+||+.+++.|... .++|++.+.
T Consensus 174 ktvGIIGlG~IG~~vA~~l~~~---G~~V~~~dr 204 (345)
T 4g2n_A 174 RRLGIFGMGRIGRAIATRARGF---GLAIHYHNR 204 (345)
T ss_dssp CEEEEESCSHHHHHHHHHHHTT---TCEEEEECS
T ss_pred CEEEEEEeChhHHHHHHHHHHC---CCEEEEECC
Confidence 5899999999999999998753 378887764
No 125
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=90.89 E-value=0.21 Score=46.11 Aligned_cols=32 Identities=22% Similarity=0.304 Sum_probs=26.5
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
..+|||+|+|+||+.+++.|... .++|++.+.
T Consensus 141 g~tvgIiG~G~IG~~vA~~l~~~---G~~V~~~d~ 172 (334)
T 2pi1_A 141 RLTLGVIGTGRIGSRVAMYGLAF---GMKVLCYDV 172 (334)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHT---TCEEEEECS
T ss_pred CceEEEECcCHHHHHHHHHHHHC---cCEEEEECC
Confidence 36899999999999999998764 378877764
No 126
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=90.71 E-value=0.61 Score=40.69 Aligned_cols=33 Identities=18% Similarity=0.371 Sum_probs=25.9
Q ss_pred ceeeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 85 ~~ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
|+++|.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r 34 (311)
T 3m2p_A 1 MSLKIAVTGGTGFLGQYVVESIKNDG---NTPIILTR 34 (311)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCC---CEEEEEeC
Confidence 446899999 9999999999999863 47666643
No 127
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=90.44 E-value=0.28 Score=38.13 Aligned_cols=31 Identities=16% Similarity=0.209 Sum_probs=25.7
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
.+|.|.|+|++|+.+++.|.++. .+++++..
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g---~~V~~id~ 37 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAG---KKVLAVDK 37 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTT---CCEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CeEEEEEC
Confidence 57999999999999999998753 57777754
No 128
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=90.42 E-value=0.25 Score=45.61 Aligned_cols=31 Identities=23% Similarity=0.344 Sum_probs=25.5
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
..+|||+|||+||+.+++.+... .+++++.+
T Consensus 141 g~tvGIiG~G~IG~~va~~~~~f---g~~v~~~d 171 (334)
T 3kb6_A 141 RLTLGVIGTGRIGSRVAMYGLAF---GMKVLCYD 171 (334)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHT---TCEEEEEC
T ss_pred CcEEEEECcchHHHHHHHhhccc---CceeeecC
Confidence 35799999999999999988764 37877764
No 129
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=90.38 E-value=0.23 Score=45.58 Aligned_cols=33 Identities=18% Similarity=0.264 Sum_probs=26.9
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~ 121 (269)
..+|||+|+|+||+.+++.+... .++|++.+..
T Consensus 139 g~tvGIiG~G~IG~~vA~~l~~~---G~~V~~~dr~ 171 (315)
T 3pp8_A 139 EFSVGIMGAGVLGAKVAESLQAW---GFPLRCWSRS 171 (315)
T ss_dssp TCCEEEECCSHHHHHHHHHHHTT---TCCEEEEESS
T ss_pred CCEEEEEeeCHHHHHHHHHHHHC---CCEEEEEcCC
Confidence 35899999999999999998754 3788888643
No 130
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=90.37 E-value=0.98 Score=36.44 Aligned_cols=84 Identities=18% Similarity=0.149 Sum_probs=55.6
Q ss_pred eeEEEEcC----ChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEE
Q 024349 87 LKVAINGF----GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVV 162 (269)
Q Consensus 87 ikVaInGf----GrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~ 162 (269)
.+|+|+|. |++|+.+++.|.+.. +++..+|-. . .++. +.|. +++
T Consensus 14 ~~IavIGas~~~g~~G~~~~~~L~~~G---~~v~~vnp~----~---------------------~g~~--i~G~--~~~ 61 (145)
T 2duw_A 14 RTIALVGASDKPDRPSYRVMKYLLDQG---YHVIPVSPK----V---------------------AGKT--LLGQ--QGY 61 (145)
T ss_dssp CCEEEESCCSCTTSHHHHHHHHHHHHT---CCEEEECSS----S---------------------TTSE--ETTE--ECC
T ss_pred CEEEEECcCCCCCChHHHHHHHHHHCC---CEEEEeCCc----c---------------------cccc--cCCe--ecc
Confidence 57999998 899999999887643 466666532 0 0011 1232 222
Q ss_pred ecCCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEe
Q 024349 163 SNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIIT 207 (269)
Q Consensus 163 ~~~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIIS 207 (269)
.++++++ ..+|+|+-++......+-+...+++|++.+++.
T Consensus 62 --~sl~el~---~~~Dlvii~vp~~~v~~v~~~~~~~g~~~i~i~ 101 (145)
T 2duw_A 62 --ATLADVP---EKVDMVDVFRNSEAAWGVAQEAIAIGAKTLWLQ 101 (145)
T ss_dssp --SSTTTCS---SCCSEEECCSCSTHHHHHHHHHHHHTCCEEECC
T ss_pred --CCHHHcC---CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEc
Confidence 3566665 278999999986555555666667899988875
No 131
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=90.31 E-value=0.9 Score=44.35 Aligned_cols=100 Identities=16% Similarity=0.119 Sum_probs=62.9
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCC---------CCccccccccccc-ccccccCceEEEecCCeEEECC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS---------GGVKNASHLLKYD-SLLGTFKADVKIVDNETISVDG 156 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~---------~~~~~~a~LlkyD-S~hG~f~g~v~~~~~~~L~inG 156 (269)
.+|+|-|||-+|..+++.|.+.. -++|+|.|. .+.+.+..|+++- ...|+..+- .+. + -+.
T Consensus 253 ~~vaVqG~GnVG~~~a~~L~~~G---akvVavsD~~G~i~dp~Gid~edl~~l~~~k~~~~g~v~~~----~~~-~-~~a 323 (470)
T 2bma_A 253 QTAVVSGSGNVALYCVQKLLHLN---VKVLTLSDSNGYVYEPNGFTHENLEFLIDLKEEKKGRIKEY----LNH-S-STA 323 (470)
T ss_dssp CEEEEECSSHHHHHHHHHHHHTT---CEECEEEETTEEEECSSCCCHHHHHHHHHHHTTTTCCGGGG----GGT-C-SSC
T ss_pred CEEEEECCcHHHHHHHHHHHHCC---CEEEEEEeCCceEECCCCCCHHHHHHHHHHHHhcCCcHHHH----Hhh-c-CCc
Confidence 58999999999999999998753 588989884 2344444555422 111221110 000 0 011
Q ss_pred EEEEEEecCCCCCCCCCCCCccEEEEcC-CCCCChhhHHHHHHcCCCE
Q 024349 157 KLIKVVSNRDPLQLPWAELGIDIVIEGT-GVFVDGPGAGKHIQAGAKK 203 (269)
Q Consensus 157 k~I~V~~~~~P~~i~w~~~gvDiVve~T-G~f~~~e~a~~Hl~aGakk 203 (269)
+ .+ +++++ | +..+||.+-|. +.-++.+.+.+.++.+||-
T Consensus 324 ~---~v---~~~~~-~-~~~~DI~iPcA~~~~I~~~na~~l~~~~ak~ 363 (470)
T 2bma_A 324 K---YF---PNEKP-W-GVPCTLAFPCATQNDVDLDQAKLLQKNGCIL 363 (470)
T ss_dssp E---EC---SSCCT-T-SSCCSEEEECSSTTCBCSHHHHHHHHTTCCE
T ss_pred E---Ee---cCcCe-e-ecCccEEEeccccCcCCHHHHHHHHhcCcEE
Confidence 1 11 22333 8 46899999886 7788889999888888863
No 132
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=90.26 E-value=0.27 Score=45.45 Aligned_cols=33 Identities=24% Similarity=0.246 Sum_probs=27.1
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~ 121 (269)
..+|||+|+|+||+.+++.|... .++|++.+..
T Consensus 140 g~tvGIIGlG~IG~~vA~~l~~~---G~~V~~~dr~ 172 (324)
T 3hg7_A 140 GRTLLILGTGSIGQHIAHTGKHF---GMKVLGVSRS 172 (324)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT---TCEEEEECSS
T ss_pred cceEEEEEECHHHHHHHHHHHhC---CCEEEEEcCC
Confidence 35899999999999999998764 3788888643
No 133
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=90.25 E-value=0.27 Score=45.20 Aligned_cols=32 Identities=31% Similarity=0.484 Sum_probs=26.3
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
..+|||+|+|+||+.+++.+... .+++++.+.
T Consensus 146 g~~vgIiG~G~IG~~~A~~l~~~---G~~V~~~d~ 177 (331)
T 1xdw_A 146 NCTVGVVGLGRIGRVAAQIFHGM---GATVIGEDV 177 (331)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHT---TCEEEEECS
T ss_pred CCEEEEECcCHHHHHHHHHHHHC---CCEEEEECC
Confidence 46899999999999999998764 368877764
No 134
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=90.24 E-value=0.27 Score=44.73 Aligned_cols=32 Identities=25% Similarity=0.236 Sum_probs=26.2
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
..+|||+|+|+||+.+++.|... .+++++.+.
T Consensus 124 g~~vgIIG~G~IG~~~A~~l~~~---G~~V~~~dr 155 (303)
T 1qp8_A 124 GEKVAVLGLGEIGTRVGKILAAL---GAQVRGFSR 155 (303)
T ss_dssp TCEEEEESCSTHHHHHHHHHHHT---TCEEEEECS
T ss_pred CCEEEEEccCHHHHHHHHHHHHC---CCEEEEECC
Confidence 35899999999999999998764 368777764
No 135
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=90.12 E-value=0.27 Score=45.75 Aligned_cols=33 Identities=21% Similarity=0.373 Sum_probs=27.0
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~ 121 (269)
..+|||+|+|+||+.+++.+... .++|++.+..
T Consensus 148 gktvgIiGlG~IG~~vA~~l~~~---G~~V~~~d~~ 180 (343)
T 2yq5_A 148 NLTVGLIGVGHIGSAVAEIFSAM---GAKVIAYDVA 180 (343)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHT---TCEEEEECSS
T ss_pred CCeEEEEecCHHHHHHHHHHhhC---CCEEEEECCC
Confidence 35899999999999999998764 3788877653
No 136
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=90.11 E-value=0.28 Score=45.18 Aligned_cols=32 Identities=22% Similarity=0.421 Sum_probs=26.2
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
..+|||+|+|+||+.+++.+... .+++++.+.
T Consensus 145 g~~vgIiG~G~IG~~~A~~l~~~---G~~V~~~d~ 176 (333)
T 1dxy_A 145 QQTVGVMGTGHIGQVAIKLFKGF---GAKVIAYDP 176 (333)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHT---TCEEEEECS
T ss_pred CCEEEEECcCHHHHHHHHHHHHC---CCEEEEECC
Confidence 35899999999999999998754 368777754
No 137
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=90.05 E-value=1.1 Score=35.90 Aligned_cols=86 Identities=16% Similarity=0.045 Sum_probs=57.0
Q ss_pred eeEEEEcC----ChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEE
Q 024349 87 LKVAINGF----GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVV 162 (269)
Q Consensus 87 ikVaInGf----GrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~ 162 (269)
.+|+|+|. |++|+.+++.|.+.. +++..||-. +. ++. +.|. +++
T Consensus 14 ~~vaVvGas~~~g~~G~~~~~~l~~~G---~~v~~vnp~----~~-----~~~------------------i~G~--~~~ 61 (140)
T 1iuk_A 14 KTIAVLGAHKDPSRPAHYVPRYLREQG---YRVLPVNPR----FQ-----GEE------------------LFGE--EAV 61 (140)
T ss_dssp CEEEEETCCSSTTSHHHHHHHHHHHTT---CEEEEECGG----GT-----TSE------------------ETTE--ECB
T ss_pred CEEEEECCCCCCCChHHHHHHHHHHCC---CEEEEeCCC----cc-----cCc------------------CCCE--Eec
Confidence 57999997 899999999988653 576666521 00 111 2232 222
Q ss_pred ecCCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecC
Q 024349 163 SNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (269)
Q Consensus 163 ~~~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP 209 (269)
.+.++++- .+|+|+-++......+-+....+.|+|.+++++.
T Consensus 62 --~sl~el~~---~vDlavi~vp~~~~~~v~~~~~~~gi~~i~~~~g 103 (140)
T 1iuk_A 62 --ASLLDLKE---PVDILDVFRPPSALMDHLPEVLALRPGLVWLQSG 103 (140)
T ss_dssp --SSGGGCCS---CCSEEEECSCHHHHTTTHHHHHHHCCSCEEECTT
T ss_pred --CCHHHCCC---CCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 23455542 6899999988766666677777889999888653
No 138
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=90.02 E-value=0.28 Score=45.69 Aligned_cols=32 Identities=22% Similarity=0.330 Sum_probs=26.4
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
..+|||+|+|+||+.+++.+... .++|++.+.
T Consensus 160 g~tvGIIGlG~IG~~vA~~l~~~---G~~V~~~d~ 191 (352)
T 3gg9_A 160 GQTLGIFGYGKIGQLVAGYGRAF---GMNVLVWGR 191 (352)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT---TCEEEEECS
T ss_pred CCEEEEEeECHHHHHHHHHHHhC---CCEEEEECC
Confidence 35899999999999999998764 378887753
No 139
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=89.82 E-value=0.31 Score=45.10 Aligned_cols=32 Identities=22% Similarity=0.336 Sum_probs=26.2
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
..+|||+|+|+||+.+++.+... .++|++.+.
T Consensus 165 g~tvgIIGlG~IG~~vA~~l~~~---G~~V~~~d~ 196 (335)
T 2g76_A 165 GKTLGILGLGRIGREVATRMQSF---GMKTIGYDP 196 (335)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT---TCEEEEECS
T ss_pred cCEEEEEeECHHHHHHHHHHHHC---CCEEEEECC
Confidence 35899999999999999988753 378887764
No 140
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=89.51 E-value=0.34 Score=44.25 Aligned_cols=32 Identities=25% Similarity=0.480 Sum_probs=26.6
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
..+|||+|+|+||+.+++.+... .++|++.+.
T Consensus 146 g~~vgIIG~G~IG~~~A~~l~~~---G~~V~~~d~ 177 (320)
T 1gdh_A 146 NKTLGIYGFGSIGQALAKRAQGF---DMDIDYFDT 177 (320)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT---TCEEEEECS
T ss_pred CCEEEEECcCHHHHHHHHHHHHC---CCEEEEECC
Confidence 35899999999999999998753 378888875
No 141
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=89.38 E-value=0.26 Score=45.37 Aligned_cols=32 Identities=19% Similarity=0.234 Sum_probs=25.8
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
..+|||+|+|+||+.+++.+... .++|++.+.
T Consensus 145 g~tvGIIG~G~IG~~vA~~l~~~---G~~V~~~d~ 176 (330)
T 4e5n_A 145 NATVGFLGMGAIGLAMADRLQGW---GATLQYHEA 176 (330)
T ss_dssp TCEEEEECCSHHHHHHHHHTTTS---CCEEEEECS
T ss_pred CCEEEEEeeCHHHHHHHHHHHHC---CCEEEEECC
Confidence 36899999999999999987543 478877754
No 142
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=89.35 E-value=0.36 Score=46.22 Aligned_cols=32 Identities=31% Similarity=0.484 Sum_probs=28.2
Q ss_pred eeEEEEcCChHHHHHHHHHHh-CCCCCceEEEEcCC
Q 024349 87 LKVAINGFGRIGRNFLRCWHG-RKDSPLDVVVVNDS 121 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~-r~~~~l~iVaInd~ 121 (269)
.+|+|.|||+||+.+++.+.+ . .+++++++|+
T Consensus 213 ktvgI~G~G~VG~~vA~~l~~~~---G~kVv~~sD~ 245 (419)
T 1gtm_A 213 KTIAIQGYGNAGYYLAKIMSEDF---GMKVVAVSDS 245 (419)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CCEEEEEECS
T ss_pred CEEEEEcCCHHHHHHHHHHHHhc---CCEEEEEeCC
Confidence 589999999999999999987 4 3799999876
No 143
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=89.33 E-value=0.31 Score=45.48 Aligned_cols=32 Identities=19% Similarity=0.267 Sum_probs=26.0
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
..+|||+|+|+||+.+++.|... .++|++.+.
T Consensus 164 gktvGIIG~G~IG~~vA~~l~~~---G~~V~~~dr 195 (351)
T 3jtm_A 164 GKTIGTVGAGRIGKLLLQRLKPF---GCNLLYHDR 195 (351)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGG---CCEEEEECS
T ss_pred CCEEeEEEeCHHHHHHHHHHHHC---CCEEEEeCC
Confidence 35899999999999999998754 368777763
No 144
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=89.33 E-value=0.48 Score=35.98 Aligned_cols=31 Identities=23% Similarity=0.539 Sum_probs=25.2
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
++|+|.|+|++|+.+++.|.++. .+++++..
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g---~~v~~~d~ 35 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKG---HDIVLIDI 35 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhCC---CeEEEEEC
Confidence 58999999999999999988752 57766643
No 145
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=89.29 E-value=0.36 Score=44.89 Aligned_cols=32 Identities=19% Similarity=0.289 Sum_probs=26.0
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
..+|||+|+|+||+.+++.|... .++|++.+.
T Consensus 168 g~tvGIIG~G~IG~~vA~~l~~~---G~~V~~~d~ 199 (347)
T 1mx3_A 168 GETLGIIGLGRVGQAVALRAKAF---GFNVLFYDP 199 (347)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT---TCEEEEECT
T ss_pred CCEEEEEeECHHHHHHHHHHHHC---CCEEEEECC
Confidence 35899999999999999998754 368777653
No 146
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=89.14 E-value=0.41 Score=41.55 Aligned_cols=31 Identities=23% Similarity=0.224 Sum_probs=24.8
Q ss_pred eeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 87 ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
++|.|.| +|.||+.+++.|.++. .+|+++..
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~R 36 (313)
T 1qyd_A 5 SRVLIVGGTGYIGKRIVNASISLG---HPTYVLFR 36 (313)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTT---CCEEEECC
T ss_pred CEEEEEcCCcHHHHHHHHHHHhCC---CcEEEEEC
Confidence 5799999 9999999999998863 46655543
No 147
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=89.14 E-value=1.3 Score=35.50 Aligned_cols=82 Identities=26% Similarity=0.238 Sum_probs=55.1
Q ss_pred eeEEEEcC----ChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEE
Q 024349 87 LKVAINGF----GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVV 162 (269)
Q Consensus 87 ikVaInGf----GrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~ 162 (269)
.+|+|+|. |++|+.+++.|.+.. +++..||-. ++. +.|. +++
T Consensus 23 ~~iaVVGas~~~g~~G~~~~~~l~~~G---~~v~~Vnp~-----------~~~------------------i~G~--~~y 68 (144)
T 2d59_A 23 KKIALVGASPKPERDANIVMKYLLEHG---YDVYPVNPK-----------YEE------------------VLGR--KCY 68 (144)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTT---CEEEEECTT-----------CSE------------------ETTE--ECB
T ss_pred CEEEEEccCCCCCchHHHHHHHHHHCC---CEEEEECCC-----------CCe------------------ECCe--ecc
Confidence 57999997 799999999887653 577666532 011 1232 222
Q ss_pred ecCCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEe
Q 024349 163 SNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIIT 207 (269)
Q Consensus 163 ~~~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIIS 207 (269)
.++++++- .+|+|+-++......+-+...++.|++.++++
T Consensus 69 --~sl~~l~~---~vDlvvi~vp~~~~~~vv~~~~~~gi~~i~~~ 108 (144)
T 2d59_A 69 --PSVLDIPD---KIEVVDLFVKPKLTMEYVEQAIKKGAKVVWFQ 108 (144)
T ss_dssp --SSGGGCSS---CCSEEEECSCHHHHHHHHHHHHHHTCSEEEEC
T ss_pred --CCHHHcCC---CCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEC
Confidence 34555542 68999999887655666667778899987765
No 148
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=89.11 E-value=0.38 Score=43.70 Aligned_cols=32 Identities=22% Similarity=0.449 Sum_probs=26.3
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
..+|+|+|+|+||+.+++.+... .+++++.+.
T Consensus 142 g~~vgIiG~G~IG~~~A~~l~~~---G~~V~~~d~ 173 (307)
T 1wwk_A 142 GKTIGIIGFGRIGYQVAKIANAL---GMNILLYDP 173 (307)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT---TCEEEEECS
T ss_pred CceEEEEccCHHHHHHHHHHHHC---CCEEEEECC
Confidence 35899999999999999998764 368877764
No 149
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=89.10 E-value=0.3 Score=44.40 Aligned_cols=31 Identities=23% Similarity=0.352 Sum_probs=26.1
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
.+|||+|+|+||+.+++.|... .++|++.+.
T Consensus 123 ~tvGIIGlG~IG~~vA~~l~~~---G~~V~~~dr 153 (290)
T 3gvx_A 123 KALGILGYGGIGRRVAHLAKAF---GMRVIAYTR 153 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH---TCEEEEECS
T ss_pred chheeeccCchhHHHHHHHHhh---CcEEEEEec
Confidence 5899999999999999988754 378888864
No 150
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=89.09 E-value=0.33 Score=45.63 Aligned_cols=32 Identities=25% Similarity=0.478 Sum_probs=25.8
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
..+|||+|+|+||+.+++.+... .++|++.+.
T Consensus 176 gktvGIIGlG~IG~~vA~~l~~f---G~~V~~~d~ 207 (365)
T 4hy3_A 176 GSEIGIVGFGDLGKALRRVLSGF---RARIRVFDP 207 (365)
T ss_dssp SSEEEEECCSHHHHHHHHHHTTS---CCEEEEECS
T ss_pred CCEEEEecCCcccHHHHHhhhhC---CCEEEEECC
Confidence 35899999999999999988543 478877754
No 151
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=89.08 E-value=0.38 Score=43.83 Aligned_cols=33 Identities=24% Similarity=0.344 Sum_probs=26.6
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~ 121 (269)
..+|||+|+|+||+.+++.+... .+++++.+..
T Consensus 144 g~~vgIIG~G~IG~~~A~~l~~~---G~~V~~~d~~ 176 (311)
T 2cuk_A 144 GLTLGLVGMGRIGQAVAKRALAF---GMRVVYHART 176 (311)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT---TCEEEEECSS
T ss_pred CCEEEEEEECHHHHHHHHHHHHC---CCEEEEECCC
Confidence 35899999999999999998764 3687777643
No 152
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=89.06 E-value=0.38 Score=44.73 Aligned_cols=32 Identities=22% Similarity=0.317 Sum_probs=25.7
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
..+|||+|+|+||+.+++.+... .++|++.+.
T Consensus 171 gktiGIIGlG~IG~~vA~~l~~~---G~~V~~~dr 202 (340)
T 4dgs_A 171 GKRIGVLGLGQIGRALASRAEAF---GMSVRYWNR 202 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT---TCEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHHC---CCEEEEEcC
Confidence 36899999999999999998753 368776653
No 153
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=88.79 E-value=0.4 Score=44.05 Aligned_cols=33 Identities=24% Similarity=0.357 Sum_probs=26.7
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~ 121 (269)
..+|||+|+|+||+.+++.+... .+++++.+..
T Consensus 146 g~~vgIiG~G~IG~~~A~~l~~~---G~~V~~~d~~ 178 (333)
T 1j4a_A 146 DQVVGVVGTGHIGQVFMQIMEGF---GAKVITYDIF 178 (333)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHT---TCEEEEECSS
T ss_pred CCEEEEEccCHHHHHHHHHHHHC---CCEEEEECCC
Confidence 36899999999999999998764 3688777643
No 154
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=88.55 E-value=0.43 Score=43.42 Aligned_cols=32 Identities=25% Similarity=0.327 Sum_probs=26.2
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
..+|||+|+|+||+.+++.|... .+++++.+.
T Consensus 142 g~~vgIIG~G~IG~~~A~~l~~~---G~~V~~~d~ 173 (313)
T 2ekl_A 142 GKTIGIVGFGRIGTKVGIIANAM---GMKVLAYDI 173 (313)
T ss_dssp TCEEEEESCSHHHHHHHHHHHHT---TCEEEEECS
T ss_pred CCEEEEEeeCHHHHHHHHHHHHC---CCEEEEECC
Confidence 35899999999999999998764 368877754
No 155
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=88.54 E-value=0.42 Score=45.34 Aligned_cols=30 Identities=13% Similarity=0.328 Sum_probs=25.3
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
.+|||+|+|+||+.+++.|... .++|++.+
T Consensus 120 ktvGIIGlG~IG~~vA~~l~a~---G~~V~~~d 149 (381)
T 3oet_A 120 RTIGIVGVGNVGSRLQTRLEAL---GIRTLLCD 149 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEEC
T ss_pred CEEEEEeECHHHHHHHHHHHHC---CCEEEEEC
Confidence 5899999999999999998764 36877764
No 156
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=88.47 E-value=0.3 Score=42.84 Aligned_cols=32 Identities=25% Similarity=0.236 Sum_probs=25.0
Q ss_pred ceeeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 85 ~~ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
|+.+|.|.| .|.||+.+++.|.++. .+|+++.
T Consensus 10 m~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~l~ 42 (318)
T 2r6j_A 10 MKSKILIFGGTGYIGNHMVKGSLKLG---HPTYVFT 42 (318)
T ss_dssp CCCCEEEETTTSTTHHHHHHHHHHTT---CCEEEEE
T ss_pred CCCeEEEECCCchHHHHHHHHHHHCC---CcEEEEE
Confidence 445899999 8999999999998863 4555543
No 157
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=88.46 E-value=0.51 Score=37.42 Aligned_cols=31 Identities=16% Similarity=0.207 Sum_probs=25.4
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
.+|.|.|+|++|+.+++.|.++. .++++|..
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~g---~~V~vid~ 34 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQRG---QNVTVISN 34 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTT---CCEEEEEC
T ss_pred CcEEEECCCHHHHHHHHHHHHCC---CCEEEEEC
Confidence 47999999999999999998753 57777754
No 158
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=88.33 E-value=0.43 Score=45.26 Aligned_cols=31 Identities=23% Similarity=0.232 Sum_probs=25.7
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
.+|||+|+|+||+.+++.+... .+++++.+.
T Consensus 146 ktlGiIGlG~IG~~vA~~l~~~---G~~V~~~d~ 176 (404)
T 1sc6_A 146 KKLGIIGYGHIGTQLGILAESL---GMYVYFYDI 176 (404)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEECS
T ss_pred CEEEEEeECHHHHHHHHHHHHC---CCEEEEEcC
Confidence 5899999999999999998764 378877753
No 159
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=88.26 E-value=0.47 Score=43.86 Aligned_cols=31 Identities=19% Similarity=0.232 Sum_probs=25.4
Q ss_pred eeEEEEcCChHHHHHHHHHH-hCCCCCceEEEEcC
Q 024349 87 LKVAINGFGRIGRNFLRCWH-GRKDSPLDVVVVND 120 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~-~r~~~~l~iVaInd 120 (269)
.+|||+|+|+||+.+++.+. .. .++|++.+.
T Consensus 164 ~~vgIIG~G~IG~~vA~~l~~~~---G~~V~~~d~ 195 (348)
T 2w2k_A 164 HVLGAVGLGAIQKEIARKAVHGL---GMKLVYYDV 195 (348)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CCEEEEECS
T ss_pred CEEEEEEECHHHHHHHHHHHHhc---CCEEEEECC
Confidence 58999999999999999987 54 368777654
No 160
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=88.20 E-value=0.45 Score=44.98 Aligned_cols=31 Identities=19% Similarity=0.413 Sum_probs=25.4
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
..+|||+|+|+||+.+++.|... .+++++.+
T Consensus 116 g~tvGIIGlG~IG~~vA~~l~~~---G~~V~~~d 146 (380)
T 2o4c_A 116 ERTYGVVGAGQVGGRLVEVLRGL---GWKVLVCD 146 (380)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHT---TCEEEEEC
T ss_pred CCEEEEEeCCHHHHHHHHHHHHC---CCEEEEEc
Confidence 35899999999999999998764 36877664
No 161
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=87.53 E-value=0.43 Score=40.10 Aligned_cols=31 Identities=32% Similarity=0.381 Sum_probs=25.8
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
+||.|.|+|++|+.+++.|.++. .++++|..
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g---~~v~vid~ 31 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRK---YGVVIINK 31 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTT---CCEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhCC---CeEEEEEC
Confidence 47999999999999999998753 57777754
No 162
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=87.39 E-value=0.76 Score=36.53 Aligned_cols=32 Identities=28% Similarity=0.336 Sum_probs=25.8
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
..+|.|.|+|++|+.+++.|.++. .+++++..
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g---~~V~vid~ 50 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSG---HSVVVVDK 50 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CCcEEEECCCHHHHHHHHHHHhCC---CeEEEEEC
Confidence 358999999999999999998752 57777753
No 163
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=87.34 E-value=0.5 Score=43.58 Aligned_cols=32 Identities=22% Similarity=0.237 Sum_probs=25.3
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
..+|||+|+|+||+.+++.|... .++|++.+.
T Consensus 164 g~~vgIIG~G~iG~~vA~~l~~~---G~~V~~~dr 195 (333)
T 3ba1_A 164 GKRVGIIGLGRIGLAVAERAEAF---DCPISYFSR 195 (333)
T ss_dssp TCCEEEECCSHHHHHHHHHHHTT---TCCEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHHC---CCEEEEECC
Confidence 35899999999999999998754 367666653
No 164
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=87.22 E-value=0.49 Score=44.87 Aligned_cols=31 Identities=23% Similarity=0.265 Sum_probs=25.6
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
.+|||+|+|+||+.+++.|... .++|++.+.
T Consensus 192 ktvGIIGlG~IG~~vA~~l~a~---G~~V~~~d~ 222 (393)
T 2nac_A 192 MHVGTVAAGRIGLAVLRRLAPF---DVHLHYTDR 222 (393)
T ss_dssp CEEEEECCSHHHHHHHHHHGGG---TCEEEEECS
T ss_pred CEEEEEeECHHHHHHHHHHHhC---CCEEEEEcC
Confidence 5899999999999999998754 378877754
No 165
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=86.81 E-value=0.56 Score=43.07 Aligned_cols=32 Identities=25% Similarity=0.262 Sum_probs=25.7
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
..+|+|+|+|+||+.+++.+... .+++++.+.
T Consensus 146 g~~vgIIG~G~iG~~vA~~l~~~---G~~V~~~d~ 177 (333)
T 2d0i_A 146 GKKVGILGMGAIGKAIARRLIPF---GVKLYYWSR 177 (333)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGG---TCEEEEECS
T ss_pred cCEEEEEccCHHHHHHHHHHHHC---CCEEEEECC
Confidence 35899999999999999998754 368777654
No 166
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=86.80 E-value=0.63 Score=42.60 Aligned_cols=32 Identities=22% Similarity=0.407 Sum_probs=26.0
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
..+|+|+|+|+||+.+++.+... .++|++.+.
T Consensus 150 g~~vgIIG~G~iG~~iA~~l~~~---G~~V~~~d~ 181 (334)
T 2dbq_A 150 GKTIGIIGLGRIGQAIAKRAKGF---NMRILYYSR 181 (334)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT---TCEEEEECS
T ss_pred CCEEEEEccCHHHHHHHHHHHhC---CCEEEEECC
Confidence 35899999999999999998764 368777654
No 167
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=86.77 E-value=0.53 Score=42.99 Aligned_cols=32 Identities=25% Similarity=0.358 Sum_probs=25.7
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
..+|+|+|+|+||+.+++.+... .++|++.+.
T Consensus 155 g~~vgIIG~G~iG~~iA~~l~~~---G~~V~~~d~ 186 (330)
T 2gcg_A 155 QSTVGIIGLGRIGQAIARRLKPF---GVQRFLYTG 186 (330)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGG---TCCEEEEES
T ss_pred CCEEEEECcCHHHHHHHHHHHHC---CCEEEEECC
Confidence 35899999999999999998754 257777653
No 168
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=86.47 E-value=0.55 Score=43.81 Aligned_cols=32 Identities=22% Similarity=0.175 Sum_probs=25.6
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCce-EEEEcC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLD-VVVVND 120 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~-iVaInd 120 (269)
..+|||+|+|+||+.+++.|... .++ |++.+.
T Consensus 164 g~tvgIIG~G~IG~~vA~~l~~~---G~~~V~~~d~ 196 (364)
T 2j6i_A 164 GKTIATIGAGRIGYRVLERLVPF---NPKELLYYDY 196 (364)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGG---CCSEEEEECS
T ss_pred CCEEEEECcCHHHHHHHHHHHhC---CCcEEEEECC
Confidence 35899999999999999998753 366 777753
No 169
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=86.23 E-value=0.67 Score=44.40 Aligned_cols=31 Identities=19% Similarity=0.259 Sum_probs=25.7
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
.+|||+|+|+||+.+++.+... .+++++.+.
T Consensus 157 ktvGIIGlG~IG~~vA~~l~~~---G~~V~~yd~ 187 (416)
T 3k5p_A 157 KTLGIVGYGNIGSQVGNLAESL---GMTVRYYDT 187 (416)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEECT
T ss_pred CEEEEEeeCHHHHHHHHHHHHC---CCEEEEECC
Confidence 5899999999999999998764 378777753
No 170
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=86.21 E-value=0.61 Score=39.64 Aligned_cols=33 Identities=21% Similarity=0.371 Sum_probs=26.4
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~ 121 (269)
++||+|.|.|.+|+.+++.|.+.. .+++.+.+.
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g---~~V~~v~~r 55 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQ---IPAIIANSR 55 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTT---CCEEEECTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC---CEEEEEECC
Confidence 579999999999999999998752 576664554
No 171
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=86.10 E-value=0.58 Score=38.03 Aligned_cols=31 Identities=26% Similarity=0.260 Sum_probs=25.3
Q ss_pred eeEEEEcCChHHHHHHHHHHhC-CCCCceEEEEcC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGR-KDSPLDVVVVND 120 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r-~~~~l~iVaInd 120 (269)
.+|.|.|+|++|+.+++.|.++ . .+++++..
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g---~~V~vid~ 71 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYG---KISLGIEI 71 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHC---SCEEEEES
T ss_pred CcEEEECCCHHHHHHHHHHHhccC---CeEEEEEC
Confidence 5799999999999999998764 3 57777754
No 172
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=86.09 E-value=0.92 Score=40.89 Aligned_cols=86 Identities=19% Similarity=0.150 Sum_probs=53.2
Q ss_pred eeeEEEEcC-ChHHHHHHHHHHhCCCCCceEE-EEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEe
Q 024349 86 KLKVAINGF-GRIGRNFLRCWHGRKDSPLDVV-VVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (269)
Q Consensus 86 ~ikVaInGf-GrIGR~llR~l~~r~~~~l~iV-aInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~ 163 (269)
..||+|.|. |+.|+.+++.+.+. .+++| .||... . | . .+.| ++++.
T Consensus 7 ~~~VaVvGasG~~G~~~~~~l~~~---g~~~v~~VnP~~-~-------------g-----------~--~i~G--~~vy~ 54 (288)
T 1oi7_A 7 ETRVLVQGITGREGQFHTKQMLTY---GTKIVAGVTPGK-G-------------G-----------M--EVLG--VPVYD 54 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHH---TCEEEEEECTTC-T-------------T-----------C--EETT--EEEES
T ss_pred CCEEEEECCCCCHHHHHHHHHHHc---CCeEEEEECCCC-C-------------C-----------c--eECC--EEeeC
Confidence 368999995 99999999988764 35655 444220 0 0 0 0223 22321
Q ss_pred cCCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEE
Q 024349 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVII 206 (269)
Q Consensus 164 ~~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVII 206 (269)
+.++++- +..+|+++.++......+-+...+++|++.+|+
T Consensus 55 --sl~el~~-~~~~Dv~Ii~vp~~~~~~~~~ea~~~Gi~~vVi 94 (288)
T 1oi7_A 55 --TVKEAVA-HHEVDASIIFVPAPAAADAALEAAHAGIPLIVL 94 (288)
T ss_dssp --SHHHHHH-HSCCSEEEECCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred --CHHHHhh-cCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEE
Confidence 2222221 126788998888877777777788889886655
No 173
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=85.63 E-value=0.81 Score=40.72 Aligned_cols=31 Identities=29% Similarity=0.384 Sum_probs=25.2
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
.+|+|+|+|+||+.+++.|.... ++|++.+.
T Consensus 156 ~~v~IiG~G~iG~~~a~~l~~~G---~~V~~~dr 186 (293)
T 3d4o_A 156 ANVAVLGLGRVGMSVARKFAALG---AKVKVGAR 186 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEEeeCHHHHHHHHHHHhCC---CEEEEEEC
Confidence 58999999999999999987642 57766653
No 174
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=85.46 E-value=0.78 Score=40.10 Aligned_cols=32 Identities=22% Similarity=0.381 Sum_probs=24.2
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
|++||+|+|+|.+|+.+++.|.... .++.+++
T Consensus 4 M~m~i~iiG~G~~G~~~a~~l~~~g---~~V~~~~ 35 (299)
T 1vpd_A 4 MTMKVGFIGLGIMGKPMSKNLLKAG---YSLVVSD 35 (299)
T ss_dssp --CEEEEECCSTTHHHHHHHHHHTT---CEEEEEC
T ss_pred ccceEEEECchHHHHHHHHHHHhCC---CEEEEEe
Confidence 5579999999999999999988642 5665553
No 175
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=85.03 E-value=0.83 Score=39.25 Aligned_cols=23 Identities=13% Similarity=0.332 Sum_probs=20.7
Q ss_pred eeeEEEEcCChHHHHHHHHHHhC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGR 108 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r 108 (269)
++||+|+|.|.+|+.+++.|...
T Consensus 2 ~~~i~iIG~G~mG~~~a~~l~~~ 24 (247)
T 3gt0_A 2 DKQIGFIGCGNMGMAMIGGMINK 24 (247)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT
T ss_pred CCeEEEECccHHHHHHHHHHHhC
Confidence 46899999999999999999875
No 176
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=84.83 E-value=0.91 Score=40.44 Aligned_cols=32 Identities=28% Similarity=0.367 Sum_probs=25.6
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
..+|+|.|+|+||+.+++.|.... ++|++.+.
T Consensus 157 g~~v~IiG~G~iG~~~a~~l~~~G---~~V~~~d~ 188 (300)
T 2rir_A 157 GSQVAVLGLGRTGMTIARTFAALG---ANVKVGAR 188 (300)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CCEEEEEcccHHHHHHHHHHHHCC---CEEEEEEC
Confidence 358999999999999999987642 57766653
No 177
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=84.76 E-value=0.74 Score=43.57 Aligned_cols=31 Identities=32% Similarity=0.546 Sum_probs=26.2
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
.+|.|.|+||+|+.+++.|.++ +.++++|..
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~---g~~vvvId~ 35 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSS---GVKMVVLDH 35 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT---TCCEEEEEC
T ss_pred CeEEEECCCHHHHHHHHHHHHC---CCCEEEEEC
Confidence 4799999999999999999875 368888854
No 178
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=84.70 E-value=1.5 Score=42.46 Aligned_cols=32 Identities=41% Similarity=0.699 Sum_probs=28.4
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~ 121 (269)
.+|+|-|||-+|+.+++.|.+.. ..+|+|.|.
T Consensus 236 ~~vaVqGfGnVG~~~a~~L~e~G---akvVavsD~ 267 (440)
T 3aog_A 236 ARVAIQGFGNVGNAAARAFHDHG---ARVVAVQDH 267 (440)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEECS
T ss_pred CEEEEeccCHHHHHHHHHHHHCC---CEEEEEEcC
Confidence 68999999999999999998863 699999886
No 179
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=84.55 E-value=0.92 Score=44.04 Aligned_cols=99 Identities=21% Similarity=0.261 Sum_probs=59.8
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCC---------CCccccccccc-ccccccccCceEEEecCCeEEECC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS---------GGVKNASHLLK-YDSLLGTFKADVKIVDNETISVDG 156 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~---------~~~~~~a~Llk-yDS~hG~f~g~v~~~~~~~L~inG 156 (269)
.+|+|-|||-+|..+++.|.+.. -++|++.|. .|++.+..|++ ..+..|+...-.+ + .+.
T Consensus 236 k~vaVQG~GnVG~~aa~~L~e~G---akvVavsD~~G~i~d~~Gid~e~l~~l~e~k~~~~g~v~~~~~--~-----~g~ 305 (450)
T 4fcc_A 236 MRVSVSGSGNVAQYAIEKAMEFG---ARVITASDSSGTVVDESGFTKEKLARLIEIKSSRDGRVADYAK--E-----FGL 305 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEEETTEEEECTTCCCHHHHHHHHHHHTSTTCCHHHHHH--H-----HTC
T ss_pred CEEEEeCCChHHHHHHHHHHhcC---CeEEEEecCCceEEeCCCCCHHHHHHHHHHhcccCCccccccc--c-----CCc
Confidence 58999999999999999998753 588888764 23444444442 1121121100000 0 011
Q ss_pred EEEEEEecCCCCCCCCCCCCccEEEEc-CCCCCChhhHHHHHHcCCCE
Q 024349 157 KLIKVVSNRDPLQLPWAELGIDIVIEG-TGVFVDGPGAGKHIQAGAKK 203 (269)
Q Consensus 157 k~I~V~~~~~P~~i~w~~~gvDiVve~-TG~f~~~e~a~~Hl~aGakk 203 (269)
..+. +++ .|. ..+||.+=| ++.-++.+.+.+-.+.|||-
T Consensus 306 ---~~~~---~~~-i~~-~~~DI~iPcAl~~~I~~~~a~~L~a~g~k~ 345 (450)
T 4fcc_A 306 ---VYLE---GQQ-PWS-VPVDIALPCATQNELDVDAAHQLIANGVKA 345 (450)
T ss_dssp ---EEEE---TCC-GGG-SCCSEEEECSCTTCBCHHHHHHHHHTTCCE
T ss_pred ---EEec---Ccc-ccc-CCccEEeeccccccccHHHHHHHHhcCceE
Confidence 1111 222 364 589988877 57788888888766668854
No 180
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=84.39 E-value=1 Score=39.09 Aligned_cols=32 Identities=28% Similarity=0.446 Sum_probs=24.6
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
+++||+|+|.|.+|..+++.|.+.. .++..++
T Consensus 2 ~~m~i~iiG~G~~G~~~a~~l~~~g---~~V~~~~ 33 (316)
T 2ew2_A 2 NAMKIAIAGAGAMGSRLGIMLHQGG---NDVTLID 33 (316)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CCCeEEEECcCHHHHHHHHHHHhCC---CcEEEEE
Confidence 3469999999999999999987642 4766664
No 181
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=84.37 E-value=0.88 Score=34.53 Aligned_cols=30 Identities=27% Similarity=0.504 Sum_probs=23.8
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
.+|.|.|.|.+|+.+++.|.+.. .+++++.
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g---~~v~~~d 36 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMG---HEVLAVD 36 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTT---CCCEEEE
T ss_pred CcEEEECCCHHHHHHHHHHHHCC---CEEEEEe
Confidence 47999999999999999988753 4555554
No 182
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=84.09 E-value=0.72 Score=40.14 Aligned_cols=31 Identities=16% Similarity=0.229 Sum_probs=24.6
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
++||+|+|+|.+|+.+++.|... ..++++++
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~---g~~V~~~~ 33 (295)
T 1yb4_A 3 AMKLGFIGLGIMGSPMAINLARA---GHQLHVTT 33 (295)
T ss_dssp -CEEEECCCSTTHHHHHHHHHHT---TCEEEECC
T ss_pred CCEEEEEccCHHHHHHHHHHHhC---CCEEEEEc
Confidence 36899999999999999998864 25766554
No 183
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=84.05 E-value=1.1 Score=39.15 Aligned_cols=32 Identities=25% Similarity=0.386 Sum_probs=25.7
Q ss_pred ceeeEEEEcC-ChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 85 AKLKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 85 ~~ikVaInGf-GrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
|++||+|+|. |.+|+.+++.|.... .++++++
T Consensus 10 mmm~I~iIG~tG~mG~~la~~l~~~g---~~V~~~~ 42 (286)
T 3c24_A 10 GPKTVAILGAGGKMGARITRKIHDSA---HHLAAIE 42 (286)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHSS---SEEEEEC
T ss_pred cCCEEEEECCCCHHHHHHHHHHHhCC---CEEEEEE
Confidence 4569999999 999999999988652 5766554
No 184
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=83.96 E-value=0.58 Score=39.45 Aligned_cols=33 Identities=18% Similarity=0.271 Sum_probs=25.2
Q ss_pred ceeeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 85 ~~ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
++.+|.|-| .|.||+.+++.|.++. ..+|+++.
T Consensus 22 ~mk~vlVtGatG~iG~~l~~~L~~~G--~~~V~~~~ 55 (236)
T 3qvo_A 22 HMKNVLILGAGGQIARHVINQLADKQ--TIKQTLFA 55 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCT--TEEEEEEE
T ss_pred cccEEEEEeCCcHHHHHHHHHHHhCC--CceEEEEE
Confidence 356899999 9999999999998752 24665554
No 185
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=83.72 E-value=1 Score=38.09 Aligned_cols=32 Identities=31% Similarity=0.354 Sum_probs=24.1
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
+++||+|.|+|.+|+.+++.|.... .++++++
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g---~~V~~~~ 58 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSG---FKVVVGS 58 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTT---CCEEEEE
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCC---CEEEEEe
Confidence 3468999999999999999988642 4665554
No 186
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=83.54 E-value=1.1 Score=38.45 Aligned_cols=23 Identities=17% Similarity=0.466 Sum_probs=20.2
Q ss_pred eeeEEEEcCChHHHHHHHHHHhC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGR 108 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r 108 (269)
++||+|+|+|.+|+.+++.|...
T Consensus 3 ~m~i~iiG~G~mG~~~a~~l~~~ 25 (259)
T 2ahr_A 3 AMKIGIIGVGKMASAIIKGLKQT 25 (259)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTS
T ss_pred ccEEEEECCCHHHHHHHHHHHhC
Confidence 36899999999999999988754
No 187
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=83.50 E-value=1.1 Score=40.31 Aligned_cols=33 Identities=18% Similarity=0.323 Sum_probs=26.1
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
|++||+|+|+|.+|..+++.|.+.. ..++++.+
T Consensus 23 M~m~IgvIG~G~mG~~lA~~L~~~G--~~~V~~~d 55 (317)
T 4ezb_A 23 MMTTIAFIGFGEAAQSIAGGLGGRN--AARLAAYD 55 (317)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTT--CSEEEEEC
T ss_pred cCCeEEEECccHHHHHHHHHHHHcC--CCeEEEEe
Confidence 5679999999999999999988642 14666654
No 188
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=83.43 E-value=1.2 Score=40.41 Aligned_cols=34 Identities=18% Similarity=0.205 Sum_probs=25.5
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
+.+||+|+|+|.||+.+++.|.... ...+|++.+
T Consensus 32 ~~~kI~IIG~G~mG~slA~~l~~~G-~~~~V~~~d 65 (314)
T 3ggo_A 32 SMQNVLIVGVGFMGGSFAKSLRRSG-FKGKIYGYD 65 (314)
T ss_dssp SCSEEEEESCSHHHHHHHHHHHHTT-CCSEEEEEC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCC-CCCEEEEEE
Confidence 3468999999999999999988652 112666554
No 189
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=83.29 E-value=4.8 Score=36.26 Aligned_cols=87 Identities=17% Similarity=0.087 Sum_probs=53.6
Q ss_pred eeeEEEEcCChHHHH-HHHHHHhCCCCCceEEEEcCCCC-cccccccccccccccccCceEEEecCCeEEECCEEEEEEe
Q 024349 86 KLKVAINGFGRIGRN-FLRCWHGRKDSPLDVVVVNDSGG-VKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (269)
Q Consensus 86 ~ikVaInGfGrIGR~-llR~l~~r~~~~l~iVaInd~~~-~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~ 163 (269)
+.||.+.|.|.+|.. +++.|.++. .+|. +.|..+ ......| + + .| |++..
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G---~~V~-~~D~~~~~~~~~~L-~---------------~------~g--i~v~~ 55 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAG---FEVS-GCDAKMYPPMSTQL-E---------------A------LG--IDVYE 55 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTT---CEEE-EEESSCCTTHHHHH-H---------------H------TT--CEEEE
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCC---CEEE-EEcCCCCcHHHHHH-H---------------h------CC--CEEEC
Confidence 358999999999995 888888763 4544 344311 1111111 0 1 01 22333
Q ss_pred cCCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCC
Q 024349 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAK 202 (269)
Q Consensus 164 ~~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGak 202 (269)
..+|+++.+ .++|+||-+.|.-.+.+......+.|.+
T Consensus 56 g~~~~~l~~--~~~d~vV~Spgi~~~~p~~~~a~~~gi~ 92 (326)
T 3eag_A 56 GFDAAQLDE--FKADVYVIGNVAKRGMDVVEAILNLGLP 92 (326)
T ss_dssp SCCGGGGGS--CCCSEEEECTTCCTTCHHHHHHHHTTCC
T ss_pred CCCHHHcCC--CCCCEEEECCCcCCCCHHHHHHHHcCCc
Confidence 345665531 2589999999998888777777777773
No 190
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=83.15 E-value=1.2 Score=39.46 Aligned_cols=32 Identities=22% Similarity=0.296 Sum_probs=25.5
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
+++||+|+|+|.+|+.+++.|.+. ..+|++.+
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~---G~~V~~~d 37 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRA---GLSTWGAD 37 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT---TCEEEEEC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC---CCeEEEEE
Confidence 346899999999999999999875 25776664
No 191
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=82.75 E-value=1.2 Score=43.50 Aligned_cols=32 Identities=25% Similarity=0.265 Sum_probs=26.0
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
..+|+|+|+|+||+.+++.|... .+++++.+.
T Consensus 142 g~~vgIIG~G~IG~~vA~~l~~~---G~~V~~~d~ 173 (529)
T 1ygy_A 142 GKTVGVVGLGRIGQLVAQRIAAF---GAYVVAYDP 173 (529)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT---TCEEEEECT
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC---CCEEEEECC
Confidence 35899999999999999998754 368877753
No 192
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=82.62 E-value=2.8 Score=40.63 Aligned_cols=99 Identities=15% Similarity=0.158 Sum_probs=60.8
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCC---------C-Ccccccccccccccc-cccCceEEEecCCeEEEC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS---------G-GVKNASHLLKYDSLL-GTFKADVKIVDNETISVD 155 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~---------~-~~~~~a~LlkyDS~h-G~f~g~v~~~~~~~L~in 155 (269)
.+|+|-|||-+|..+++.|.+.. .++|+|.|. . +++.+..|+++-..+ |.+..- .+ .+ +
T Consensus 231 ~~v~VqG~GnVG~~~a~~L~~~G---akvVavsD~~G~i~dp~Gi~d~edi~~l~~~k~~~~g~v~~y----~~-~~--~ 300 (449)
T 1bgv_A 231 KTVALAGFGNVAWGAAKKLAELG---AKAVTLSGPDGYIYDPEGITTEEKINYMLEMRASGRNKVQDY----AD-KF--G 300 (449)
T ss_dssp CEEEECCSSHHHHHHHHHHHHHT---CEEEEEEETTEEEECTTCSCSHHHHHHHHHHHHHCCCCTHHH----HH-HH--T
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CEEEEEEeCCceEECCCcCCCHHHHHHHHHHHhccCCChhhc----cc-cc--C
Confidence 58999999999999999998753 699998884 1 222334454432111 221110 00 00 1
Q ss_pred CEEEEEEecCCCCCCCCCCCCccEEEEcC-CCCCChhhHHHHHHcCCCE
Q 024349 156 GKLIKVVSNRDPLQLPWAELGIDIVIEGT-GVFVDGPGAGKHIQAGAKK 203 (269)
Q Consensus 156 Gk~I~V~~~~~P~~i~w~~~gvDiVve~T-G~f~~~e~a~~Hl~aGakk 203 (269)
.+.+ . ++++ | ...+|+.+-|. +..++.+.+.+....|||-
T Consensus 301 a~~i---~---~~e~-~-~~~~Dil~P~A~~~~I~~~na~~l~a~g~ki 341 (449)
T 1bgv_A 301 VQFF---P---GEKP-W-GQKVDIIMPCATQNDVDLEQAKKIVANNVKY 341 (449)
T ss_dssp CEEE---E---TCCG-G-GSCCSEEECCSCTTCBCHHHHHHHHHTTCCE
T ss_pred CEEe---C---chhh-h-cCCcceeeccccccccchhhHHHHHhcCCeE
Confidence 2222 1 3333 7 46899999875 7788888888766678863
No 193
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=82.61 E-value=1.4 Score=39.42 Aligned_cols=32 Identities=22% Similarity=0.319 Sum_probs=25.9
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
++||+|+|+|.+|+.+++.|.+.. .+|++.+.
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~~~G---~~V~~~dr 52 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLLKNG---FKVTVWNR 52 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CCEEEEECccHHHHHHHHHHHHCC---CeEEEEeC
Confidence 469999999999999999998752 57766643
No 194
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=82.41 E-value=2.1 Score=41.66 Aligned_cols=102 Identities=19% Similarity=0.247 Sum_probs=59.6
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCC---------CCccccccccccccccc-ccCceEEEecCCeEEECC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS---------GGVKNASHLLKYDSLLG-TFKADVKIVDNETISVDG 156 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~---------~~~~~~a~LlkyDS~hG-~f~g~v~~~~~~~L~inG 156 (269)
.+|+|-|||-+|..+++.|.+.. -++|+|.|. .|++.+..+.++...++ +....+ +. ..+.
T Consensus 240 ~~VaVQG~GnVG~~aa~~L~e~G---akvVavsD~~G~iyd~~Gld~~~l~~~~~~k~~~~~~v~~~~---~~---~~~a 310 (456)
T 3r3j_A 240 KKCLVSGSGNVAQYLVEKLIEKG---AIVLTMSDSNGYILEPNGFTKEQLNYIMDIKNNQRLRLKEYL---KY---SKTA 310 (456)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHT---CCBCCEECSSCEEECTTCCCHHHHHHHHHHHHTSCCCGGGGG---GT---CSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CEEEEEECCCCcEECCCCCCHHHHHHHHHHHHhcCcchhhhh---hc---CCCc
Confidence 58999999999999999988752 467777774 23444433322221111 100000 00 0011
Q ss_pred EEEEEEecCCCCCCCCCCCCccEEEEc-CCCCCChhhHHHHHHcCCCEEEE
Q 024349 157 KLIKVVSNRDPLQLPWAELGIDIVIEG-TGVFVDGPGAGKHIQAGAKKVII 206 (269)
Q Consensus 157 k~I~V~~~~~P~~i~w~~~gvDiVve~-TG~f~~~e~a~~Hl~aGakkVII 206 (269)
+. + ++++ .|. ..+||.+=| ++.-++.+.+.+-++.+|| +|+
T Consensus 311 ~~---v---~~~~-i~~-~~~DI~iPcA~~~~I~~~na~~l~~~~ak-~V~ 352 (456)
T 3r3j_A 311 KY---F---ENQK-PWN-IPCDIAFPCATQNEINENDADLFIQNKCK-MIV 352 (456)
T ss_dssp EE---E---CSCC-GGG-SCCSEEEECSCTTCBCHHHHHHHHHHTCC-EEE
T ss_pred eE---e---CCcc-ccc-cCccEEEeCCCccchhhHHHHHHHhcCCe-EEE
Confidence 11 1 2333 364 589999887 5778888888877777885 344
No 195
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=82.06 E-value=2.2 Score=38.35 Aligned_cols=129 Identities=16% Similarity=0.173 Sum_probs=68.9
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEecCC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRD 166 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~~~ 166 (269)
-+|.|+|.|.||...++++..+. .+++++... .+.+..+.+ +|. +. ++ .+
T Consensus 178 ~~VlV~GaG~vG~~a~qla~~~G---a~Vi~~~~~--~~~~~~~~~----lGa----------~~---------v~--~~ 227 (348)
T 3two_A 178 TKVGVAGFGGLGSMAVKYAVAMG---AEVSVFARN--EHKKQDALS----MGV----------KH---------FY--TD 227 (348)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTT---CEEEEECSS--STTHHHHHH----TTC----------SE---------EE--SS
T ss_pred CEEEEECCcHHHHHHHHHHHHCC---CeEEEEeCC--HHHHHHHHh----cCC----------Ce---------ec--CC
Confidence 47999999999999888876542 477776432 233332221 221 11 11 23
Q ss_pred CCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecCCCCCCCCeEEeecCc-ccc-CCCCCceEEcCChhHHh
Q 024349 167 PLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNE-KDY-DHEVANIVSNASCTTNC 244 (269)
Q Consensus 167 P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP~k~~Dip~iV~GVN~-~~~-~~~~~~IISnaSCTTn~ 244 (269)
++.+ .+ ++|+|||++|.....+.+-..++.|-+-|++..+..+ ..+. +|. +.+ ..+ ..++..-..+...
T Consensus 228 ~~~~--~~-~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~-~~~~----~~~~~~~~~~~-~~i~g~~~~~~~~ 298 (348)
T 3two_A 228 PKQC--KE-ELDFIISTIPTHYDLKDYLKLLTYNGDLALVGLPPVE-VAPV----LSVFDFIHLGN-RKVYGSLIGGIKE 298 (348)
T ss_dssp GGGC--CS-CEEEEEECCCSCCCHHHHHTTEEEEEEEEECCCCCGG-GCCE----EEHHHHHHTCS-CEEEECCSCCHHH
T ss_pred HHHH--hc-CCCEEEECCCcHHHHHHHHHHHhcCCEEEEECCCCCC-Cccc----CCHHHHHhhCC-eEEEEEecCCHHH
Confidence 3322 22 8999999999875666666666655433333222201 2221 121 122 223 4566554445555
Q ss_pred HHHHHHHHhh
Q 024349 245 LAPFVKVMDE 254 (269)
Q Consensus 245 LaPvlkvL~d 254 (269)
+.-+++.+.+
T Consensus 299 ~~~~~~l~~~ 308 (348)
T 3two_A 299 TQEMVDFSIK 308 (348)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 6666666654
No 196
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=81.88 E-value=1.3 Score=38.89 Aligned_cols=31 Identities=16% Similarity=0.210 Sum_probs=25.4
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
++||+|+|+|.+|+.+++.|.+.. .++++++
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~G---~~V~~~d 33 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKAG---YLLNVFD 33 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTT---CEEEEEC
T ss_pred CCEEEEEeecHHHHHHHHHHHhCC---CeEEEEc
Confidence 368999999999999999998752 5776664
No 197
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=81.86 E-value=1.4 Score=38.54 Aligned_cols=31 Identities=16% Similarity=0.337 Sum_probs=24.6
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
++||+|+|+|.+|+.+++.|... ..++++++
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~---g~~V~~~~ 34 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKE---GVTVYAFD 34 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHT---TCEEEEEC
T ss_pred CCEEEEECccHHHHHHHHHHHHC---CCeEEEEe
Confidence 36899999999999999998764 25766553
No 198
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=81.72 E-value=1.5 Score=37.98 Aligned_cols=32 Identities=19% Similarity=0.221 Sum_probs=24.2
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
+||+|+|+|.+|+.+++.|.... ...+|++++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g-~~~~V~~~d 33 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSG-FKGKIYGYD 33 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTT-CCSEEEEEC
T ss_pred cEEEEEecCHHHHHHHHHHHhcC-CCcEEEEEe
Confidence 48999999999999999988642 123666554
No 199
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=81.59 E-value=2.8 Score=37.16 Aligned_cols=32 Identities=25% Similarity=0.482 Sum_probs=23.8
Q ss_pred eeeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 86 ~ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
-+|-.|+| .||.||.+.+++.. .++++|+.-|
T Consensus 12 ~~~~~v~Ga~GrMG~~i~~~~~~---~~~elv~~id 44 (228)
T 1vm6_A 12 HMKYGIVGYSGRMGQEIQKVFSE---KGHELVLKVD 44 (228)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHH---TTCEEEEEEE
T ss_pred cceeEEEEecCHHHHHHHHHHhC---CCCEEEEEEc
Confidence 36889999 79999999887543 3478776643
No 200
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=81.49 E-value=1.6 Score=38.29 Aligned_cols=30 Identities=20% Similarity=0.272 Sum_probs=24.7
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
+||+|+|+|.+|+.+++.|.+.. .++++.+
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G---~~V~~~d 31 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAG---CSVTIWN 31 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CEEEEEeecHHHHHHHHHHHHCC---CeEEEEc
Confidence 58999999999999999998752 5766554
No 201
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=81.33 E-value=1.4 Score=39.54 Aligned_cols=31 Identities=23% Similarity=0.234 Sum_probs=25.4
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
++||+|+|+|.+|+.+++.|... ..+|++.+
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~---G~~V~~~d 61 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEA---GYALQVWN 61 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHT---TCEEEEEC
T ss_pred CCEEEEECccHHHHHHHHHHHhC---CCeEEEEc
Confidence 46899999999999999999865 25766664
No 202
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=81.28 E-value=2.3 Score=40.79 Aligned_cols=32 Identities=31% Similarity=0.383 Sum_probs=28.3
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~ 121 (269)
.+|+|-|||-+|+.+++.|.+. ..++|+|.|.
T Consensus 211 k~vaVqG~GnVG~~aa~~L~e~---GakVVavsD~ 242 (421)
T 1v9l_A 211 KTVAIQGMGNVGRWTAYWLEKM---GAKVIAVSDI 242 (421)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT---TCEEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHHC---CCEEEEEECC
Confidence 5899999999999999999875 3799999886
No 203
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=81.13 E-value=1.4 Score=43.02 Aligned_cols=31 Identities=19% Similarity=0.374 Sum_probs=25.3
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
..+|+|.|+|+||+.+++.+... .++|++.+
T Consensus 277 GktVgIIG~G~IG~~vA~~l~~~---G~~V~v~d 307 (494)
T 3d64_A 277 GKIAVVAGYGDVGKGCAQSLRGL---GATVWVTE 307 (494)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT---TCEEEEEC
T ss_pred CCEEEEEccCHHHHHHHHHHHHC---CCEEEEEe
Confidence 35899999999999999998754 36877664
No 204
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=80.88 E-value=1.2 Score=39.55 Aligned_cols=31 Identities=26% Similarity=0.389 Sum_probs=24.9
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
++||+|+|+|.+|+.+++.|.+. ..++++.+
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~---G~~V~~~d 45 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEW---PGGVTVYD 45 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTS---TTCEEEEC
T ss_pred CCeEEEECcCHHHHHHHHHHHHC---CCeEEEEe
Confidence 46899999999999999998764 25766664
No 205
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=80.66 E-value=1.1 Score=42.87 Aligned_cols=32 Identities=25% Similarity=0.494 Sum_probs=26.1
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
.|||.|.|+|++|+.+++.|.+. +.++++|..
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~---~~~v~vId~ 34 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGE---NNDITIVDK 34 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCST---TEEEEEEES
T ss_pred cCEEEEECCCHHHHHHHHHHHHC---CCCEEEEEC
Confidence 36899999999999999998754 357887754
No 206
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=80.63 E-value=0.53 Score=45.16 Aligned_cols=93 Identities=20% Similarity=0.279 Sum_probs=51.9
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCE--EEEEEec
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGK--LIKVVSN 164 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk--~I~V~~~ 164 (269)
.+|.|.|-|+||..+++.|.++ .++..|.. +.+..-.|-+ .+ ++.++++|. ...+..+
T Consensus 236 ~~v~I~GgG~ig~~lA~~L~~~----~~v~iIE~--d~~r~~~la~------~l--------~~~~Vi~GD~td~~~L~e 295 (461)
T 4g65_A 236 RRIMIVGGGNIGASLAKRLEQT----YSVKLIER--NLQRAEKLSE------EL--------ENTIVFCGDAADQELLTE 295 (461)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT----SEEEEEES--CHHHHHHHHH------HC--------TTSEEEESCTTCHHHHHH
T ss_pred cEEEEEcchHHHHHHHHHhhhc----CceEEEec--CHHHHHHHHH------HC--------CCceEEeccccchhhHhh
Confidence 4799999999999999988543 56665654 2332222211 01 234555542 2222221
Q ss_pred CCCCCCCCCCCCccEEEEcCCCCCChhhHHHHH-HcCCCEEEE
Q 024349 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHI-QAGAKKVII 206 (269)
Q Consensus 165 ~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl-~aGakkVII 206 (269)
. .+ ...|+++=.|+..-.-=-+.... +.|++|+|.
T Consensus 296 e---~i----~~~D~~ia~T~~De~Ni~~~llAk~~gv~kvIa 331 (461)
T 4g65_A 296 E---NI----DQVDVFIALTNEDETNIMSAMLAKRMGAKKVMV 331 (461)
T ss_dssp T---TG----GGCSEEEECCSCHHHHHHHHHHHHHTTCSEEEE
T ss_pred c---Cc----hhhcEEEEcccCcHHHHHHHHHHHHcCCccccc
Confidence 1 22 25679999998753332223322 459999765
No 207
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=80.52 E-value=1.5 Score=39.16 Aligned_cols=32 Identities=19% Similarity=0.323 Sum_probs=25.7
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
+++||+|+|+|.+|+.+++.|.+.. +++++.+
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~G---~~V~~~d 39 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQG---KRVAIWN 39 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHTT---CCEEEEC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCC---CEEEEEe
Confidence 3468999999999999999998752 5766664
No 208
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=80.39 E-value=1.8 Score=37.38 Aligned_cols=30 Identities=23% Similarity=0.387 Sum_probs=24.2
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
+||+|+|+|.+|+.+++.|.... .++++++
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g---~~V~~~~ 30 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRG---HYLIGVS 30 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CEEEEEcCcHHHHHHHHHHHHCC---CEEEEEE
Confidence 47999999999999999988642 4766663
No 209
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=80.37 E-value=1.8 Score=37.23 Aligned_cols=32 Identities=22% Similarity=0.373 Sum_probs=25.2
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
+.+||+|+|+|.+|+.+++.|.+.. .+|++.+
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~G---~~V~~~~ 49 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADLG---HEVTIGT 49 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCC---CEEEEEe
Confidence 3468999999999999999998652 5766654
No 210
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=80.30 E-value=1.4 Score=39.56 Aligned_cols=33 Identities=24% Similarity=0.333 Sum_probs=26.0
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
|..|||++|+|..|..+++.|.+. .+++++.|.
T Consensus 4 Ms~kIgfIGLG~MG~~mA~~L~~~---G~~V~v~dr 36 (297)
T 4gbj_A 4 MSEKIAFLGLGNLGTPIAEILLEA---GYELVVWNR 36 (297)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHT---TCEEEEC--
T ss_pred CCCcEEEEecHHHHHHHHHHHHHC---CCeEEEEeC
Confidence 666899999999999999999875 367766653
No 211
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=79.94 E-value=1.7 Score=42.42 Aligned_cols=30 Identities=20% Similarity=0.374 Sum_probs=24.4
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
.+|+|.|||+||+.+++.+... .++|++.+
T Consensus 248 KTVgVIG~G~IGr~vA~~lraf---Ga~Viv~d 277 (464)
T 3n58_A 248 KVAVVCGYGDVGKGSAQSLAGA---GARVKVTE 277 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHHC---CCEEEEEe
Confidence 5799999999999999998764 35776653
No 212
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=79.71 E-value=2.1 Score=36.11 Aligned_cols=30 Identities=17% Similarity=0.259 Sum_probs=23.4
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEE
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVV 118 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaI 118 (269)
++||+|+|.|.+|..+++.|.+.. .+++.+
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g---~~V~~~ 48 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAG---HEVTYY 48 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTT---CEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC---CEEEEE
Confidence 468999999999999999987642 465544
No 213
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=79.25 E-value=1.8 Score=41.75 Aligned_cols=30 Identities=23% Similarity=0.444 Sum_probs=24.4
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
.+|+|+|+|+||+.+++.|... .++|++.+
T Consensus 212 ktVgIiG~G~IG~~vA~~Lka~---Ga~Viv~D 241 (436)
T 3h9u_A 212 KTACVCGYGDVGKGCAAALRGF---GARVVVTE 241 (436)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEEC
T ss_pred CEEEEEeeCHHHHHHHHHHHHC---CCEEEEEC
Confidence 5899999999999999998764 25766554
No 214
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=79.24 E-value=3.7 Score=37.03 Aligned_cols=86 Identities=21% Similarity=0.191 Sum_probs=53.6
Q ss_pred eeeEEEEc-CChHHHHHHHHHHhCCCCCceEE-EEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEe
Q 024349 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVV-VVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (269)
Q Consensus 86 ~ikVaInG-fGrIGR~llR~l~~r~~~~l~iV-aInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~ 163 (269)
+.+|+|.| .|+.|+.+++.+.+. ++++| .|| +... ++. +.| ++++
T Consensus 13 ~~~vvV~Gasg~~G~~~~~~l~~~---g~~~v~~Vn-P~~~------------------------g~~--i~G--~~vy- 59 (297)
T 2yv2_A 13 ETRVLVQGITGREGSFHAKAMLEY---GTKVVAGVT-PGKG------------------------GSE--VHG--VPVY- 59 (297)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHH---TCEEEEEEC-TTCT------------------------TCE--ETT--EEEE-
T ss_pred CCEEEEECCCCCHHHHHHHHHHhC---CCcEEEEeC-CCCC------------------------Cce--ECC--Eeee-
Confidence 35789999 599999999988764 24544 454 3000 000 123 2333
Q ss_pred cCCCCCCCCCCCC-ccEEEEcCCCCCChhhHHHHHHcCCCEEEE
Q 024349 164 NRDPLQLPWAELG-IDIVIEGTGVFVDGPGAGKHIQAGAKKVII 206 (269)
Q Consensus 164 ~~~P~~i~w~~~g-vDiVve~TG~f~~~e~a~~Hl~aGakkVII 206 (269)
.+.++++- +.+ +|+++.++......+.+...+++|++.+|+
T Consensus 60 -~sl~el~~-~~~~~DvaIi~vp~~~~~~~v~ea~~~Gi~~vVi 101 (297)
T 2yv2_A 60 -DSVKEALA-EHPEINTSIVFVPAPFAPDAVYEAVDAGIRLVVV 101 (297)
T ss_dssp -SSHHHHHH-HCTTCCEEEECCCGGGHHHHHHHHHHTTCSEEEE
T ss_pred -CCHHHHhh-cCCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEE
Confidence 12222221 113 899999999888888888888899986655
No 215
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=78.98 E-value=1.9 Score=37.59 Aligned_cols=33 Identities=21% Similarity=0.285 Sum_probs=24.9
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
++||+|+|+|.+|+.+++.|.... ...++++++
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g-~~~~V~~~d 38 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDH-PHYKIVGYN 38 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHC-TTSEEEEEC
T ss_pred cceEEEEeeCHHHHHHHHHHHhCC-CCcEEEEEc
Confidence 468999999999999999887642 135665553
No 216
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=78.88 E-value=1.7 Score=37.57 Aligned_cols=29 Identities=28% Similarity=0.328 Sum_probs=23.3
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
+||+|+|+|.+|+.+++.|.. + .++++++
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~--g--~~V~~~~ 30 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR--R--FPTLVWN 30 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT--T--SCEEEEC
T ss_pred CeEEEEcccHHHHHHHHHHhC--C--CeEEEEe
Confidence 489999999999999998875 3 4665554
No 217
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=78.49 E-value=1.6 Score=42.63 Aligned_cols=32 Identities=22% Similarity=0.340 Sum_probs=25.7
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
..+|+|.|+|+||+.+++.+... .++|++.+.
T Consensus 257 GktVgIIG~G~IG~~vA~~l~~~---G~~Viv~d~ 288 (479)
T 1v8b_A 257 GKIVVICGYGDVGKGCASSMKGL---GARVYITEI 288 (479)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHH---TCEEEEECS
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC---cCEEEEEeC
Confidence 35899999999999999998754 368777653
No 218
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=78.43 E-value=3.4 Score=37.24 Aligned_cols=85 Identities=18% Similarity=0.158 Sum_probs=52.2
Q ss_pred eeEEEEc-CChHHHHHHHHHHhCCCCCceEE-EEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEec
Q 024349 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVV-VVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (269)
Q Consensus 87 ikVaInG-fGrIGR~llR~l~~r~~~~l~iV-aInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~ 164 (269)
.+|+|.| .|+.|+.+++.+.+.. +++| .|| +... ++. +.| ++++
T Consensus 14 ~~v~V~Gasg~~G~~~~~~l~~~g---~~~V~~Vn-P~~~------------------------g~~--i~G--~~vy-- 59 (294)
T 2yv1_A 14 TKAIVQGITGRQGSFHTKKMLECG---TKIVGGVT-PGKG------------------------GQN--VHG--VPVF-- 59 (294)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTT---CCEEEEEC-TTCT------------------------TCE--ETT--EEEE--
T ss_pred CEEEEECCCCCHHHHHHHHHHhCC---CeEEEEeC-CCCC------------------------Cce--ECC--Eeee--
Confidence 5799999 5999999999888742 4444 454 3100 000 123 2233
Q ss_pred CCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEE
Q 024349 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVII 206 (269)
Q Consensus 165 ~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVII 206 (269)
.+.++++- +..+|+++.++......+.+...+++|++.+|+
T Consensus 60 ~sl~el~~-~~~~Dv~ii~vp~~~~~~~v~ea~~~Gi~~vVi 100 (294)
T 2yv1_A 60 DTVKEAVK-ETDANASVIFVPAPFAKDAVFEAIDAGIELIVV 100 (294)
T ss_dssp SSHHHHHH-HHCCCEEEECCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred CCHHHHhh-cCCCCEEEEccCHHHHHHHHHHHHHCCCCEEEE
Confidence 12222221 125788888888877777777888888885554
No 219
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=78.40 E-value=2.1 Score=39.68 Aligned_cols=31 Identities=23% Similarity=0.490 Sum_probs=25.7
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
+||+|+|+|.+|+.+++.|.+.. .+|++.+.
T Consensus 23 mkIgiIGlG~mG~~~A~~L~~~G---~~V~v~dr 53 (358)
T 4e21_A 23 MQIGMIGLGRMGADMVRRLRKGG---HECVVYDL 53 (358)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CEEEEECchHHHHHHHHHHHhCC---CEEEEEeC
Confidence 68999999999999999998753 57766653
No 220
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=77.95 E-value=1.8 Score=37.29 Aligned_cols=32 Identities=16% Similarity=0.315 Sum_probs=24.3
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~ 121 (269)
+||+|+|.|++|+.+++.|.... .++|.+-+.
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g---~~~v~~~~~ 42 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKG---FRIVQVYSR 42 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHT---CCEEEEECS
T ss_pred CeEEEEcCCHHHHHHHHHHHHCC---CeEEEEEeC
Confidence 58999999999999999887642 464444443
No 221
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=77.86 E-value=1.9 Score=37.51 Aligned_cols=30 Identities=13% Similarity=0.383 Sum_probs=24.0
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
+||+|+|+|.+|+.+++.|.... .++++++
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g---~~V~~~~ 30 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHG---YPLIIYD 30 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTT---CCEEEEC
T ss_pred CeEEEEeccHHHHHHHHHHHHCC---CEEEEEe
Confidence 37999999999999999988642 4666554
No 222
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=77.44 E-value=2.7 Score=34.63 Aligned_cols=31 Identities=23% Similarity=0.360 Sum_probs=24.6
Q ss_pred eeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 87 ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
+||+|.| .|.+|+.+++.|.++. .++++++.
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g---~~V~~~~r 32 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLG---HEIVVGSR 32 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTT---CEEEEEES
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCC---CEEEEEeC
Confidence 3799999 9999999999988642 57666643
No 223
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=77.43 E-value=1.5 Score=38.31 Aligned_cols=30 Identities=23% Similarity=0.263 Sum_probs=24.3
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
+||+|+|+|.+|+.+++.|.+.. .++++.+
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G---~~V~~~d 31 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAG---FDVTVWN 31 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHT---CCEEEEC
T ss_pred CeEEEEccCHHHHHHHHHHHHCC---CeEEEEc
Confidence 48999999999999999988652 5666664
No 224
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=77.23 E-value=2.3 Score=36.46 Aligned_cols=29 Identities=28% Similarity=0.548 Sum_probs=23.3
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEE
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVV 118 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaI 118 (269)
+||+|+|+|.+|..+++.|.+.. .++++.
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~g---~~V~~~ 29 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSRG---VEVVTS 29 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTT---CEEEEC
T ss_pred CeEEEEechHHHHHHHHHHHHCC---CeEEEe
Confidence 37999999999999999988642 566553
No 225
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=77.16 E-value=2.1 Score=38.89 Aligned_cols=30 Identities=20% Similarity=0.331 Sum_probs=23.7
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
-+|.|.|.|.||..+++++..+. .+++++.
T Consensus 189 ~~VlV~GaG~vG~~~~q~a~~~G---a~Vi~~~ 218 (366)
T 1yqd_A 189 KHIGIVGLGGLGHVAVKFAKAFG---SKVTVIS 218 (366)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CEEEEEe
Confidence 37999999999999999876542 4777664
No 226
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=76.67 E-value=2.3 Score=37.63 Aligned_cols=30 Identities=23% Similarity=0.284 Sum_probs=24.2
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
+||+|+|+|.+|+.+++.|.... .++++++
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g---~~V~~~~ 60 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMG---HTVTVWN 60 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTT---CCEEEEC
T ss_pred CeEEEEcccHHHHHHHHHHHhCC---CEEEEEe
Confidence 68999999999999999987642 4665554
No 227
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=76.54 E-value=3 Score=33.85 Aligned_cols=31 Identities=29% Similarity=0.439 Sum_probs=25.2
Q ss_pred eeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 87 ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
|||.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g---~~V~~~~R 32 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRG---HEVTAIVR 32 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CeEEEEcCCchhHHHHHHHHHhCC---CEEEEEEc
Confidence 4799999 9999999999999863 57766643
No 228
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=76.36 E-value=3 Score=34.09 Aligned_cols=31 Identities=29% Similarity=0.414 Sum_probs=25.0
Q ss_pred eeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 87 ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
|||.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g---~~V~~~~R 32 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRG---HEVLAVVR 32 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCC---CEEEEEEe
Confidence 4799999 8999999999999863 47666643
No 229
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=75.70 E-value=2.5 Score=39.02 Aligned_cols=31 Identities=35% Similarity=0.439 Sum_probs=25.1
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
..||+|+|+|.||..+++.|.... .+|++.+
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G---~~V~~~d 38 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAAN---HSVFGYN 38 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTT---CCEEEEC
T ss_pred CCEEEEEeecHHHHHHHHHHHHCC---CEEEEEe
Confidence 358999999999999999998652 5766665
No 230
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=75.69 E-value=2.6 Score=37.34 Aligned_cols=32 Identities=22% Similarity=0.500 Sum_probs=24.6
Q ss_pred ceeeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 85 ~~ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
++.||+|+| +|.||..+++.|.... .++.+++
T Consensus 20 ~~~~I~iIGg~G~mG~~la~~l~~~G---~~V~~~~ 52 (298)
T 2pv7_A 20 DIHKIVIVGGYGKLGGLFARYLRASG---YPISILD 52 (298)
T ss_dssp TCCCEEEETTTSHHHHHHHHHHHTTT---CCEEEEC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHhCC---CeEEEEE
Confidence 445899999 9999999999987542 4655553
No 231
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=75.68 E-value=2.7 Score=39.33 Aligned_cols=31 Identities=23% Similarity=0.416 Sum_probs=26.2
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~ 121 (269)
.+|+|.|||.||+.+++.|.+. ..+|+ +.|.
T Consensus 176 ktV~I~G~GnVG~~~A~~l~~~---GakVv-vsD~ 206 (355)
T 1c1d_A 176 LTVLVQGLGAVGGSLASLAAEA---GAQLL-VADT 206 (355)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEE-EECS
T ss_pred CEEEEECcCHHHHHHHHHHHHC---CCEEE-EEeC
Confidence 5899999999999999999875 36877 7776
No 232
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=75.63 E-value=1.6 Score=39.78 Aligned_cols=22 Identities=23% Similarity=0.274 Sum_probs=18.9
Q ss_pred eeEEEEcCChHHHHHHHHHHhC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGR 108 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r 108 (269)
|||+|.|.|.||..++-.|..+
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~ 22 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLN 22 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHhC
Confidence 5899999999999988776654
No 233
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=75.57 E-value=3.3 Score=32.42 Aligned_cols=33 Identities=18% Similarity=0.216 Sum_probs=26.2
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
|..+|+|+|-|.-|-.++..|..+ .++++.+..
T Consensus 1 Mt~dV~IIGaGpaGL~aA~~La~~---G~~V~v~Ek 33 (336)
T 3kkj_A 1 MTVPIAIIGTGIAGLSAAQALTAA---GHQVHLFDK 33 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHT---TCCEEEECS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC---CCCEEEEEC
Confidence 457899999999999999888764 367777765
No 234
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=75.51 E-value=3 Score=37.37 Aligned_cols=34 Identities=18% Similarity=0.297 Sum_probs=25.9
Q ss_pred cceeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 84 VAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 84 ~~~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
.|++||+|+|.|.+|..+++.|.+.. .+|..++.
T Consensus 12 ~~~~kI~iIG~G~mG~ala~~L~~~G---~~V~~~~r 45 (335)
T 1z82_A 12 HMEMRFFVLGAGSWGTVFAQMLHENG---EEVILWAR 45 (335)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred ccCCcEEEECcCHHHHHHHHHHHhCC---CeEEEEeC
Confidence 57889999999999999999988642 46665643
No 235
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=75.09 E-value=1.1 Score=39.66 Aligned_cols=32 Identities=22% Similarity=0.152 Sum_probs=26.1
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
.+||+|+|.|.||..+++.|... ..+|++++.
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~---G~~V~~~~~ 37 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSV---GHYVTVLHA 37 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHT---TCEEEECSS
T ss_pred CcEEEEEeeCHHHHHHHHHHHHC---CCEEEEecC
Confidence 36899999999999999999865 257777654
No 236
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=74.98 E-value=2.8 Score=40.44 Aligned_cols=30 Identities=20% Similarity=0.347 Sum_probs=24.2
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
.+|+|.|+|+||+.+++.|... ..+|++.+
T Consensus 221 ktV~ViG~G~IGk~vA~~Lra~---Ga~Viv~D 250 (435)
T 3gvp_A 221 KQVVVCGYGEVGKGCCAALKAM---GSIVYVTE 250 (435)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEEC
T ss_pred CEEEEEeeCHHHHHHHHHHHHC---CCEEEEEe
Confidence 5899999999999999998764 25766553
No 237
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=74.89 E-value=3.3 Score=35.46 Aligned_cols=31 Identities=19% Similarity=0.305 Sum_probs=24.6
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
+||+|+|.|.+|..+++.|.+.. .+|..++.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g---~~V~~~~r 31 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQG---HEVQGWLR 31 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CeEEEECcCHHHHHHHHHHHhCC---CCEEEEEc
Confidence 37999999999999999988642 46666643
No 238
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=74.83 E-value=10 Score=37.27 Aligned_cols=32 Identities=25% Similarity=0.485 Sum_probs=27.7
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~ 121 (269)
.+|+|-|||-+|..+++.|.+.. ..+|+|.|.
T Consensus 245 ~tVaVQG~GNVG~~aa~~L~e~G---akVVavsDs 276 (501)
T 3mw9_A 245 KTFVVQGFGNVGLHSMRYLHRFG---AKCITVGES 276 (501)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CEEEEEEcC
Confidence 58999999999999999998753 589998874
No 239
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=74.82 E-value=2.7 Score=35.89 Aligned_cols=31 Identities=13% Similarity=0.140 Sum_probs=23.1
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
+||+|+|.|.+|+.+++.|.... ..++..++
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g--~~~v~~~~ 31 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQG--GYRIYIAN 31 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC--SCEEEEEC
T ss_pred CEEEEECchHHHHHHHHHHHHCC--CCeEEEEC
Confidence 47999999999999999887542 03555443
No 240
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=74.66 E-value=3.2 Score=36.87 Aligned_cols=30 Identities=20% Similarity=0.241 Sum_probs=24.2
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
+||+|+|.|.+|..+++.|.... .++..+.
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g---~~V~~~~ 34 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKG---QSVLAWD 34 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CeEEEECCCHHHHHHHHHHHhCC---CEEEEEe
Confidence 68999999999999999887642 5666554
No 241
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=74.55 E-value=3 Score=39.81 Aligned_cols=31 Identities=23% Similarity=0.457 Sum_probs=25.6
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
++||+|+|.|.+|..++..|.+.. .+|++++
T Consensus 2 ~mkI~VIG~G~vG~~lA~~La~~G---~~V~~~D 32 (450)
T 3gg2_A 2 SLDIAVVGIGYVGLVSATCFAELG---ANVRCID 32 (450)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CCEEEEECcCHHHHHHHHHHHhcC---CEEEEEE
Confidence 369999999999999999998752 5777664
No 242
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=74.14 E-value=2.6 Score=37.73 Aligned_cols=31 Identities=16% Similarity=0.293 Sum_probs=24.0
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCc-eEEEEc
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVN 119 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l-~iVaIn 119 (269)
++||+|+|+|.+|..+++.|.... . +|++.+
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G---~~~V~~~d 55 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAG---AIDMAAYD 55 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHS---CCEEEEEC
T ss_pred CCEEEEECccHHHHHHHHHHHHCC---CCeEEEEc
Confidence 468999999999999999998642 4 555553
No 243
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=73.92 E-value=4.5 Score=31.14 Aligned_cols=34 Identities=24% Similarity=0.277 Sum_probs=27.7
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~ 121 (269)
+.+|.|+|.|..|+.+++.+... +.++++++-|.
T Consensus 4 ~~~vlIiGaG~~g~~l~~~l~~~--~g~~vvg~~d~ 37 (141)
T 3nkl_A 4 KKKVLIYGAGSAGLQLANMLRQG--KEFHPIAFIDD 37 (141)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHS--SSEEEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCcEEEEEEEC
Confidence 36899999999999999998764 25888887654
No 244
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=73.73 E-value=3.1 Score=37.86 Aligned_cols=30 Identities=33% Similarity=0.353 Sum_probs=23.9
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
++|+|+|+|.||+.+++.|.... +++++.+
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G---~~V~~~~ 46 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSG---VDVTVGL 46 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTT---CCEEEEC
T ss_pred CEEEEECchHHHHHHHHHHHHCc---CEEEEEE
Confidence 57999999999999999987642 5665554
No 245
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=72.97 E-value=1.7 Score=34.01 Aligned_cols=29 Identities=17% Similarity=0.223 Sum_probs=22.3
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEE
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVV 118 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaI 118 (269)
.+|+|.|.|.+|+.+++.|..+ ..+++.+
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~---g~~v~v~ 50 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYP---QYKVTVA 50 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTT---TCEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhC---CCEEEEE
Confidence 5899999999999999887653 3563333
No 246
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=72.78 E-value=1.2 Score=39.14 Aligned_cols=22 Identities=32% Similarity=0.602 Sum_probs=17.6
Q ss_pred eeeEEEEcCChHHHHHHHHHHh
Q 024349 86 KLKVAINGFGRIGRNFLRCWHG 107 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~ 107 (269)
++||+|+|.|++|+.+++.|..
T Consensus 2 ~m~I~iIG~G~mG~~la~~l~~ 23 (276)
T 2i76_A 2 SLVLNFVGTGTLTRFFLECLKD 23 (276)
T ss_dssp --CCEEESCCHHHHHHHHTTC-
T ss_pred CceEEEEeCCHHHHHHHHHHHH
Confidence 4689999999999999988754
No 247
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=72.15 E-value=3.6 Score=36.32 Aligned_cols=22 Identities=18% Similarity=0.261 Sum_probs=20.2
Q ss_pred eeEEEEcCChHHHHHHHHHHhC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGR 108 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r 108 (269)
+||+|+|.|.+|+.+++.|...
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~ 25 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIAN 25 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHT
T ss_pred CEEEEEcccHHHHHHHHHHHHC
Confidence 6899999999999999998865
No 248
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=71.75 E-value=2.4 Score=36.22 Aligned_cols=22 Identities=18% Similarity=0.441 Sum_probs=19.7
Q ss_pred eeEEEEcCChHHHHHHHHHHhC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGR 108 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r 108 (269)
+||+|+|.|.+|..+++.|...
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~ 26 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANA 26 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHC
Confidence 5899999999999999988754
No 249
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=71.71 E-value=3.7 Score=33.67 Aligned_cols=31 Identities=26% Similarity=0.341 Sum_probs=25.5
Q ss_pred eeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 87 ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
++|.|.| .|.||+.+++.|.++. .+|+++..
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g---~~V~~~~r 36 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRG---FEVTAVVR 36 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTT---CEEEEECS
T ss_pred CEEEEEcCCchHHHHHHHHHHHCC---CEEEEEEc
Confidence 5899999 9999999999998763 57666643
No 250
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=71.59 E-value=2.7 Score=36.62 Aligned_cols=36 Identities=22% Similarity=0.350 Sum_probs=25.6
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCC--CCC-ceEEEEcC
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRK--DSP-LDVVVVND 120 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~--~~~-l~iVaInd 120 (269)
+++||+|.|.|.+|..++..|.... ... .+|..++.
T Consensus 7 ~~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 7 QPIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 4579999999999999999887530 002 46666653
No 251
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=71.13 E-value=3.6 Score=37.18 Aligned_cols=29 Identities=21% Similarity=0.265 Sum_probs=23.3
Q ss_pred eEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 88 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 88 kVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
||+|+|.|.+|..++..|... ..+|..++
T Consensus 17 kI~iIG~G~mG~~la~~L~~~---G~~V~~~~ 45 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKK---CREVCVWH 45 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTT---EEEEEEEC
T ss_pred eEEEECCCHHHHHHHHHHHhC---CCEEEEEE
Confidence 999999999999999988753 24666554
No 252
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=70.99 E-value=4.5 Score=34.90 Aligned_cols=30 Identities=27% Similarity=0.498 Sum_probs=24.8
Q ss_pred eeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 87 ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
|||.|-| .|-||+.|++.|.++. .+|+++.
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G---~~V~~l~ 31 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARG---HEVTLVS 31 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC---CEEEEEE
Confidence 5899999 8999999999999863 4766664
No 253
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=73.41 E-value=0.87 Score=38.56 Aligned_cols=24 Identities=21% Similarity=0.116 Sum_probs=20.4
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhC
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGR 108 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r 108 (269)
+.+||+|+|+|.+|+.+++.|.+.
T Consensus 18 ~~~~I~iIG~G~mG~~la~~L~~~ 41 (201)
T 2yjz_A 18 KQGVVCIFGTGDFGKSLGLKMLQC 41 (201)
Confidence 446899999999999999988753
No 254
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=69.97 E-value=5.6 Score=31.67 Aligned_cols=31 Identities=29% Similarity=0.255 Sum_probs=24.9
Q ss_pred eeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 87 ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
++|.|.| .|.||+.+++.|.++. .+++++..
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g---~~V~~~~r 35 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAG---YEVTVLVR 35 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCC---CeEEEEEe
Confidence 5799999 8999999999998763 46666543
No 255
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=69.59 E-value=4 Score=39.58 Aligned_cols=32 Identities=19% Similarity=0.362 Sum_probs=25.9
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
+++|+|+|+|.+|..+++.|.+.. ++|++.+.
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G---~~V~v~dr 35 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHG---FVVCAFNR 35 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTT---CCEEEECS
T ss_pred CCEEEEEChhHHHHHHHHHHHHCC---CEEEEEeC
Confidence 368999999999999999998752 57776653
No 256
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=68.92 E-value=3.1 Score=35.09 Aligned_cols=30 Identities=23% Similarity=0.333 Sum_probs=23.1
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
..+|.|.|+|++|+.+++.|.++ .. +++|.
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~---g~-v~vid 38 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGS---EV-FVLAE 38 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTS---EE-EEEES
T ss_pred CCEEEEECCChHHHHHHHHHHhC---Ce-EEEEE
Confidence 35799999999999999988754 24 66664
No 257
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=68.86 E-value=4.9 Score=34.35 Aligned_cols=31 Identities=23% Similarity=0.354 Sum_probs=25.2
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
++|.|-|.|.||+.+++.|.++. .+|+++..
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g---~~V~~~~r 34 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQG---HEVTGLRR 34 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT---CCEEEEEC
T ss_pred CcEEEECCCHHHHHHHHHHHHCC---CEEEEEeC
Confidence 58999999999999999998763 46666643
No 258
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=68.73 E-value=5.4 Score=35.57 Aligned_cols=33 Identities=24% Similarity=0.251 Sum_probs=24.4
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
|++||+|+|.|.+|..++..|.+. + .+|..+..
T Consensus 1 M~mkI~IiGaGaiG~~~a~~L~~~-g--~~V~~~~r 33 (320)
T 3i83_A 1 MSLNILVIGTGAIGSFYGALLAKT-G--HCVSVVSR 33 (320)
T ss_dssp --CEEEEESCCHHHHHHHHHHHHT-T--CEEEEECS
T ss_pred CCCEEEEECcCHHHHHHHHHHHhC-C--CeEEEEeC
Confidence 457999999999999999988764 2 46655543
No 259
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=68.08 E-value=5.6 Score=34.84 Aligned_cols=30 Identities=17% Similarity=0.141 Sum_probs=24.4
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
.||+|+|.|.+|+.+++.+... .++|+.++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~---G~~V~l~d 34 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFH---GFAVTAYD 34 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhC---CCeEEEEe
Confidence 5899999999999999998865 35766553
No 260
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=67.72 E-value=5.6 Score=38.00 Aligned_cols=33 Identities=33% Similarity=0.406 Sum_probs=28.4
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~ 121 (269)
.+|+|-|||-+|+.+++.|.++. ..++|+|.|.
T Consensus 210 ~~vaVqG~GnVG~~~a~~L~e~~--GakvVavsD~ 242 (415)
T 2tmg_A 210 ATVAVQGFGNVGQFAALLISQEL--GSKVVAVSDS 242 (415)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--CCEEEEEECS
T ss_pred CEEEEECCcHHHHHHHHHHHHhc--CCEEEEEEeC
Confidence 68999999999999999998732 3799999886
No 261
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=67.68 E-value=3.6 Score=36.31 Aligned_cols=85 Identities=15% Similarity=0.148 Sum_probs=44.6
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEecCC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRD 166 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~~~ 166 (269)
-+|.|+|-|.||...++++..+ ..+++++. . .+.+..+.+ +|. + ..+| |
T Consensus 144 ~~VlV~GaG~vG~~a~qlak~~---Ga~Vi~~~-~--~~~~~~~~~----lGa---~--------~v~~----------d 192 (315)
T 3goh_A 144 REVLIVGFGAVNNLLTQMLNNA---GYVVDLVS-A--SLSQALAAK----RGV---R--------HLYR----------E 192 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH---TCEEEEEC-S--SCCHHHHHH----HTE---E--------EEES----------S
T ss_pred CEEEEECCCHHHHHHHHHHHHc---CCEEEEEE-C--hhhHHHHHH----cCC---C--------EEEc----------C
Confidence 4799999999999988877654 24888776 2 233333221 221 1 0112 1
Q ss_pred CCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEE
Q 024349 167 PLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVII 206 (269)
Q Consensus 167 P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVII 206 (269)
.+++ ..++|+||||+|.-.. +.+-..++.|-+-|++
T Consensus 193 ~~~v---~~g~Dvv~d~~g~~~~-~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 193 PSQV---TQKYFAIFDAVNSQNA-AALVPSLKANGHIICI 228 (315)
T ss_dssp GGGC---CSCEEEEECC--------TTGGGEEEEEEEEEE
T ss_pred HHHh---CCCccEEEECCCchhH-HHHHHHhcCCCEEEEE
Confidence 2333 3589999999997544 3333455544433333
No 262
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=67.59 E-value=6.1 Score=32.41 Aligned_cols=32 Identities=13% Similarity=0.191 Sum_probs=24.4
Q ss_pred ceeeEEEEc-CChHHHHHHHHHH-hCCCCCceEEEEc
Q 024349 85 AKLKVAING-FGRIGRNFLRCWH-GRKDSPLDVVVVN 119 (269)
Q Consensus 85 ~~ikVaInG-fGrIGR~llR~l~-~r~~~~l~iVaIn 119 (269)
|+.+|.|-| .|.||+.+++.|. ++. .+|+++.
T Consensus 4 mmk~vlVtGasg~iG~~~~~~l~~~~g---~~V~~~~ 37 (221)
T 3r6d_A 4 MYXYITILGAAGQIAQXLTATLLTYTD---MHITLYG 37 (221)
T ss_dssp SCSEEEEESTTSHHHHHHHHHHHHHCC---CEEEEEE
T ss_pred eEEEEEEEeCCcHHHHHHHHHHHhcCC---ceEEEEe
Confidence 333499999 9999999999998 542 4666654
No 263
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=67.47 E-value=4.8 Score=38.51 Aligned_cols=31 Identities=19% Similarity=0.357 Sum_probs=24.9
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
+||+|+|+|.+|+.+++.|.+.. .+|.+.+.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G---~~V~v~dr 33 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHG---FVVCAFNR 33 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTT---CCEEEECS
T ss_pred CeEEEEChHHHHHHHHHHHHHCC---CeEEEEeC
Confidence 58999999999999999998652 56666653
No 264
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=67.36 E-value=3.9 Score=34.81 Aligned_cols=33 Identities=21% Similarity=0.387 Sum_probs=25.8
Q ss_pred ceeeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 85 ~~ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
|+++|.|-| .|.||+.+++.|.++ ..+|+++..
T Consensus 4 M~m~ilVtGatG~iG~~l~~~L~~~---g~~V~~~~r 37 (287)
T 3sc6_A 4 MKERVIITGANGQLGKQLQEELNPE---EYDIYPFDK 37 (287)
T ss_dssp -CEEEEEESTTSHHHHHHHHHSCTT---TEEEEEECT
T ss_pred ceeEEEEECCCCHHHHHHHHHHHhC---CCEEEEecc
Confidence 556899999 999999999998865 257776643
No 265
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=67.15 E-value=4.8 Score=35.39 Aligned_cols=31 Identities=19% Similarity=0.201 Sum_probs=24.4
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
+||+|+|.|.+|..+++.|.+.. .++..++.
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g---~~V~~~~r 31 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNG---NEVRIWGT 31 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHC---CEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCC---CeEEEEEc
Confidence 37999999999999999887642 46666653
No 266
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=67.11 E-value=17 Score=31.53 Aligned_cols=31 Identities=19% Similarity=0.229 Sum_probs=24.1
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
.+|.|+|.|.+|...++.|.+.. -+|++|..
T Consensus 32 k~VLVVGgG~va~~ka~~Ll~~G---A~VtVvap 62 (223)
T 3dfz_A 32 RSVLVVGGGTIATRRIKGFLQEG---AAITVVAP 62 (223)
T ss_dssp CCEEEECCSHHHHHHHHHHGGGC---CCEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CEEEEECC
Confidence 57999999999999999998752 35555543
No 267
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=67.03 E-value=5.6 Score=37.17 Aligned_cols=31 Identities=23% Similarity=0.481 Sum_probs=25.7
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~ 121 (269)
.+|+|.|+|.||+.+++.|.+.. .+|+ +.|.
T Consensus 174 ktV~V~G~G~VG~~~A~~L~~~G---akVv-v~D~ 204 (364)
T 1leh_A 174 LAVSVQGLGNVAKALCKKLNTEG---AKLV-VTDV 204 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEE-EECS
T ss_pred CEEEEECchHHHHHHHHHHHHCC---CEEE-EEcC
Confidence 57999999999999999998752 5777 6665
No 268
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=66.96 E-value=4.8 Score=34.94 Aligned_cols=32 Identities=22% Similarity=0.235 Sum_probs=24.6
Q ss_pred ceeeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 85 ~~ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
++++|.|.| .|.||+.+++.|.++. .+|+++.
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~ 35 (321)
T 3c1o_A 3 HMEKIIIYGGTGYIGKFMVRASLSFS---HPTFIYA 35 (321)
T ss_dssp -CCCEEEETTTSTTHHHHHHHHHHTT---CCEEEEE
T ss_pred cccEEEEEcCCchhHHHHHHHHHhCC---CcEEEEE
Confidence 346899999 8999999999999863 4555543
No 269
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=66.78 E-value=4.5 Score=38.72 Aligned_cols=33 Identities=21% Similarity=0.391 Sum_probs=28.7
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCCC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSG 122 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~~ 122 (269)
.+|+|-|||-+|+.+++.|.+.. .++|+|.|..
T Consensus 213 ~~vaVqG~GnVG~~~a~~L~~~G---akvVavsD~~ 245 (421)
T 2yfq_A 213 AKIAVQGFGNVGTFTVKNIERQG---GKVCAIAEWD 245 (421)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTT---CCEEECCBCC
T ss_pred CEEEEECcCHHHHHHHHHHHHCC---CEEEEEEecC
Confidence 58999999999999999998753 6899998873
No 270
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=66.59 E-value=5.5 Score=35.78 Aligned_cols=31 Identities=16% Similarity=0.177 Sum_probs=25.6
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
.|||++|+|..|+.+++.|... .+++.+-|.
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~---G~~v~v~dr 34 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKA---GYLLNVFDL 34 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT---TCEEEEECS
T ss_pred CEEEEeeehHHHHHHHHHHHhC---CCeEEEEcC
Confidence 4899999999999999999874 367766654
No 271
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=66.32 E-value=5.6 Score=38.75 Aligned_cols=30 Identities=30% Similarity=0.523 Sum_probs=24.5
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
.+|+|.|+|.||+.+++.+.... .+|++++
T Consensus 275 ktV~IiG~G~IG~~~A~~lka~G---a~Viv~d 304 (494)
T 3ce6_A 275 KKVLICGYGDVGKGCAEAMKGQG---ARVSVTE 304 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CEEEEEccCHHHHHHHHHHHHCC---CEEEEEe
Confidence 57999999999999999887642 5777664
No 272
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=66.05 E-value=4.3 Score=37.05 Aligned_cols=30 Identities=27% Similarity=0.362 Sum_probs=23.2
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
-+|.|+|.|.||...++++..+. .+++++.
T Consensus 196 ~~VlV~GaG~vG~~aiqlak~~G---a~Vi~~~ 225 (369)
T 1uuf_A 196 KKVGVVGIGGLGHMGIKLAHAMG---AHVVAFT 225 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CEEEEEe
Confidence 47999999999999998876542 4666664
No 273
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=65.77 E-value=5.2 Score=38.68 Aligned_cols=34 Identities=15% Similarity=0.224 Sum_probs=27.2
Q ss_pred cceeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 84 VAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 84 ~~~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
.|..+|+|+|.|.+|..+++.|.+.. ++|++.+.
T Consensus 8 ~~~~~IgvIGlG~MG~~lA~~La~~G---~~V~v~dr 41 (497)
T 2p4q_A 8 HMSADFGLIGLAVMGQNLILNAADHG---FTVCAYNR 41 (497)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHTT---CCEEEECS
T ss_pred cCCCCEEEEeeHHHHHHHHHHHHHCC---CEEEEEeC
Confidence 46679999999999999999998752 57766654
No 274
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=65.71 E-value=5.3 Score=38.26 Aligned_cols=31 Identities=26% Similarity=0.448 Sum_probs=24.8
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
+||+|+|.|.+|+.+++.|.+.. .+|.+.+.
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G---~~V~v~dr 32 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKG---FKVAVFNR 32 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTT---CCEEEECS
T ss_pred CEEEEEChHHHHHHHHHHHHHCC---CEEEEEeC
Confidence 48999999999999999988652 46666653
No 275
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=65.70 E-value=6.4 Score=33.72 Aligned_cols=33 Identities=30% Similarity=0.462 Sum_probs=26.0
Q ss_pred ceeeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 85 ~~ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
++++|.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r 39 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASG---EEVTVLDD 39 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT---CCEEEECC
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCC---CEEEEEec
Confidence 356899999 8999999999998863 46666643
No 276
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=65.43 E-value=5.1 Score=38.23 Aligned_cols=31 Identities=19% Similarity=0.335 Sum_probs=25.0
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
+||+|+|+|.+|+.+++.|.+.. .+|.+.+.
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G---~~V~v~dr 36 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRG---YTVAIYNR 36 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTT---CCEEEECS
T ss_pred CcEEEEeeHHHHHHHHHHHHhCC---CEEEEEcC
Confidence 58999999999999999998652 56666653
No 277
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=65.13 E-value=6.2 Score=35.22 Aligned_cols=30 Identities=23% Similarity=0.224 Sum_probs=23.3
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCc-eEEEEc
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVN 119 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l-~iVaIn 119 (269)
-+|.|+|.|.||...++++..+ .. +++++.
T Consensus 166 ~~VlV~GaG~vG~~~~q~a~~~---Ga~~Vi~~~ 196 (343)
T 2dq4_A 166 KSVLITGAGPIGLMAAMVVRAS---GAGPILVSD 196 (343)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT---TCCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHc---CCCEEEEEC
Confidence 3799999999999999887654 24 666664
No 278
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=64.95 E-value=4 Score=36.58 Aligned_cols=35 Identities=9% Similarity=0.211 Sum_probs=25.1
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCC-CCceEEEEcC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKD-SPLDVVVVND 120 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~-~~l~iVaInd 120 (269)
++||+|+|.|.+|..+++.|..... ...++++++.
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r 57 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSP 57 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECC
Confidence 3589999999999999999876421 1146655543
No 279
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=64.88 E-value=6.6 Score=36.31 Aligned_cols=31 Identities=29% Similarity=0.347 Sum_probs=25.0
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
..+|+|.|+|+||+.+++.+.... .+|++++
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~G---a~V~~~d 198 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMG---ATVTVLD 198 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC---CEEEEEe
Confidence 468999999999999999887642 4766664
No 280
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=64.70 E-value=4.9 Score=38.14 Aligned_cols=32 Identities=22% Similarity=0.211 Sum_probs=25.6
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
+||+|+|+|.+|..++..|.+.. ...++++++
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g-~G~~V~~~d 37 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMC-PEIRVTVVD 37 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHC-TTSEEEEEC
T ss_pred cEEEEECCCHHHHHHHHHHHhcC-CCCEEEEEE
Confidence 68999999999999999987641 136777774
No 281
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=64.58 E-value=6.3 Score=36.10 Aligned_cols=32 Identities=22% Similarity=0.255 Sum_probs=24.4
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
++||+|.|.|.+|..++..|..+. ..+|..+.
T Consensus 2 ~mkI~ViGaG~~G~~~a~~La~~~--G~~V~~~~ 33 (404)
T 3c7a_A 2 TVKVCVCGGGNGAHTLSGLAASRD--GVEVRVLT 33 (404)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTST--TEEEEEEC
T ss_pred CceEEEECCCHHHHHHHHHHHhCC--CCEEEEEe
Confidence 469999999999999999886532 25666554
No 282
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=64.47 E-value=7.9 Score=34.03 Aligned_cols=31 Identities=23% Similarity=0.257 Sum_probs=24.8
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
+.||+|+|.|.+|..++..|... ..+|+.++
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~---G~~V~~~d 45 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAAT---GHTVVLVD 45 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT---TCEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC---CCeEEEEE
Confidence 35899999999999999988764 25766664
No 283
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=64.38 E-value=6.1 Score=35.95 Aligned_cols=30 Identities=27% Similarity=0.150 Sum_probs=22.8
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCc-eEEEEc
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVN 119 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l-~iVaIn 119 (269)
-+|.|+|.|.||...++++..+. . +++++.
T Consensus 184 ~~VlV~GaG~vG~~aiqlak~~G---a~~Vi~~~ 214 (370)
T 4ej6_A 184 STVAILGGGVIGLLTVQLARLAG---ATTVILST 214 (370)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CCEEEEEC
Confidence 47999999999999888876542 4 666663
No 284
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=64.26 E-value=7.8 Score=32.11 Aligned_cols=32 Identities=19% Similarity=0.350 Sum_probs=25.7
Q ss_pred eeeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 86 ~ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
.++|.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~G---~~V~~~~R 53 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNKG---HEPVAMVR 53 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CCeEEEECCCChHHHHHHHHHHhCC---CeEEEEEC
Confidence 46899999 8999999999999863 46666643
No 285
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=64.19 E-value=6 Score=38.02 Aligned_cols=32 Identities=25% Similarity=0.417 Sum_probs=25.9
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
+.+|+|+|.|.+|..+++.|.+. ..+|++.+.
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~---G~~V~v~~r 46 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESR---GYTVSIFNR 46 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTT---TCCEEEECS
T ss_pred CCeEEEEccHHHHHHHHHHHHhC---CCeEEEEeC
Confidence 46899999999999999999864 257766654
No 286
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=64.19 E-value=5.7 Score=35.23 Aligned_cols=33 Identities=24% Similarity=0.286 Sum_probs=23.3
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
|++||+|+|.|.+|..++..|.... .+|..+..
T Consensus 1 M~mkI~IiGaGaiG~~~a~~L~~~g---~~V~~~~r 33 (312)
T 3hn2_A 1 MSLRIAIVGAGALGLYYGALLQRSG---EDVHFLLR 33 (312)
T ss_dssp ---CEEEECCSTTHHHHHHHHHHTS---CCEEEECS
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCC---CeEEEEEc
Confidence 4468999999999999999887642 35555543
No 287
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=64.13 E-value=6.6 Score=33.92 Aligned_cols=30 Identities=27% Similarity=0.267 Sum_probs=23.9
Q ss_pred eEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 88 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 88 kVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
+|+|.|.|.+|+.+++.|.+.. .++...+.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g---~~v~v~~r 147 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAG---LEVWVWNR 147 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT---CCEEEECS
T ss_pred eEEEECCcHHHHHHHHHHHHCC---CEEEEEEC
Confidence 7999999999999999998753 36555543
No 288
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=63.95 E-value=7.7 Score=33.44 Aligned_cols=31 Identities=19% Similarity=0.354 Sum_probs=24.8
Q ss_pred eeeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 86 ~ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
.++|.|-| .|.||+.+++.|.++. .+|+++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~ 33 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNN---WHAVGCG 33 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTT---CEEEEEC
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCC---CeEEEEc
Confidence 35899999 8999999999998753 5766654
No 289
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=63.92 E-value=6.3 Score=36.94 Aligned_cols=30 Identities=27% Similarity=0.581 Sum_probs=24.5
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
+||+|+|.|.+|..++..|.+.. .+|+++.
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G---~~V~~~d 30 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARG---HEVIGVD 30 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTT---CEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CEEEEEE
Confidence 48999999999999999988752 5776664
No 290
>3a06_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; MEP pathway, isoprene biosynthesis, metal- NADP, oxidoreductase; HET: NDP; 2.00A {Thermotoga maritima} PDB: 3a14_A*
Probab=63.39 E-value=7.3 Score=36.98 Aligned_cols=41 Identities=17% Similarity=0.196 Sum_probs=30.6
Q ss_pred eeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccc
Q 024349 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASH 129 (269)
Q Consensus 87 ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~ 129 (269)
.||+|.| +|.||+..++++... ++++++++.-..+++.++.
T Consensus 4 k~i~ILGsTGSIG~~tldVi~~~--~~~~vvaL~a~~n~~~l~~ 45 (376)
T 3a06_A 4 RTLVILGATGSIGTQTLDVLKKV--KGIRLIGISFHSNLELAFK 45 (376)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHS--CSEEEEEEEESSCHHHHHH
T ss_pred ceEEEECCCCHHHHHHHHHHHhC--CCeEEEEEEccCCHHHHHH
Confidence 5899999 899999999988764 4689998833324454443
No 291
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=63.34 E-value=4.6 Score=36.00 Aligned_cols=32 Identities=31% Similarity=0.280 Sum_probs=24.0
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
|++||+|+|.|.||..++..|. . + .+|..+..
T Consensus 1 M~mkI~IiGaGa~G~~~a~~L~-~-g--~~V~~~~r 32 (307)
T 3ego_A 1 MSLKIGIIGGGSVGLLCAYYLS-L-Y--HDVTVVTR 32 (307)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-T-T--SEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHh-c-C--CceEEEEC
Confidence 4579999999999999998887 4 2 46655543
No 292
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=62.77 E-value=3.6 Score=37.20 Aligned_cols=31 Identities=23% Similarity=0.323 Sum_probs=23.3
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
-+|.|.|.|.||...++++..+. .+++++..
T Consensus 182 ~~VlV~GaG~vG~~a~qlak~~G---a~Vi~~~~ 212 (357)
T 2cf5_A 182 LRGGILGLGGVGHMGVKIAKAMG---HHVTVISS 212 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT---CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CeEEEEeC
Confidence 37999999999999888776542 47766653
No 293
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=62.62 E-value=5.7 Score=32.02 Aligned_cols=33 Identities=18% Similarity=0.254 Sum_probs=24.6
Q ss_pred ceeeEEEEc-CChHHHHHHHHHHhCCCCCceEEEE
Q 024349 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVV 118 (269)
Q Consensus 85 ~~ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaI 118 (269)
|.++|.|.| .|.||+.+++.|.++. ...+++++
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~g-~~~~V~~~ 37 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSEP-TLAKVIAP 37 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHCT-TCCEEECC
T ss_pred CCceEEEECCCcHHHHHHHHHHHhCC-CCCeEEEE
Confidence 446899999 9999999999998863 11155544
No 294
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=62.49 E-value=19 Score=32.11 Aligned_cols=30 Identities=17% Similarity=0.150 Sum_probs=22.9
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCc-eEEEEc
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVN 119 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l-~iVaIn 119 (269)
-+|.|+|.|.||...++++... .. +|+++.
T Consensus 168 ~~VlV~GaG~vG~~a~qla~~~---Ga~~Vi~~~ 198 (352)
T 3fpc_A 168 DTVCVIGIGPVGLMSVAGANHL---GAGRIFAVG 198 (352)
T ss_dssp CCEEEECCSHHHHHHHHHHHTT---TCSSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHc---CCcEEEEEC
Confidence 4699999999999988877643 24 676664
No 295
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=62.27 E-value=8.4 Score=33.92 Aligned_cols=31 Identities=23% Similarity=0.366 Sum_probs=23.5
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCCCCCc--eEEEE
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPL--DVVVV 118 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~~~~l--~iVaI 118 (269)
+++||+|.|.|.+|..++..|.... . +++.+
T Consensus 6 ~~mkI~IiGaG~vG~~~a~~l~~~g---~~~~V~l~ 38 (319)
T 1lld_A 6 KPTKLAVIGAGAVGSTLAFAAAQRG---IAREIVLE 38 (319)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTT---CCSEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCC---CCCEEEEE
Confidence 3469999999999999998887642 3 55555
No 296
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=62.10 E-value=4.7 Score=35.50 Aligned_cols=24 Identities=29% Similarity=0.329 Sum_probs=19.5
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhC
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGR 108 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r 108 (269)
|++||+|+|.|.+|..++..|.+.
T Consensus 1 M~mkI~iiGaGa~G~~~a~~L~~~ 24 (294)
T 3g17_A 1 MSLSVAIIGPGAVGTTIAYELQQS 24 (294)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCHHHHHHHHHHHHC
Confidence 457999999999999999888753
No 297
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=62.00 E-value=6.5 Score=36.65 Aligned_cols=31 Identities=26% Similarity=0.438 Sum_probs=25.0
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCc-eEEEEcC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVND 120 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l-~iVaInd 120 (269)
.+|+|.|+|.||+.+++.|... .+ +|++++.
T Consensus 168 ~~VlIiGaG~iG~~~a~~l~~~---G~~~V~v~~r 199 (404)
T 1gpj_A 168 KTVLVVGAGEMGKTVAKSLVDR---GVRAVLVANR 199 (404)
T ss_dssp CEEEEESCCHHHHHHHHHHHHH---CCSEEEEECS
T ss_pred CEEEEEChHHHHHHHHHHHHHC---CCCEEEEEeC
Confidence 5799999999999999988764 25 6766664
No 298
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=61.73 E-value=17 Score=34.62 Aligned_cols=83 Identities=16% Similarity=0.210 Sum_probs=50.7
Q ss_pred eeEEEEcCChHHHH-HHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEecC
Q 024349 87 LKVAINGFGRIGRN-FLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (269)
Q Consensus 87 ikVaInGfGrIGR~-llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~~ 165 (269)
.+|.++|.|.+|.. ++|.|.++. .+|. +.|.........| + +. | |++....
T Consensus 23 ~~v~viGiG~sG~s~~A~~l~~~G---~~V~-~~D~~~~~~~~~l-~---------------~~------g--i~~~~g~ 74 (494)
T 4hv4_A 23 RHIHFVGIGGAGMGGIAEVLANEG---YQIS-GSDLAPNSVTQHL-T---------------AL------G--AQIYFHH 74 (494)
T ss_dssp CEEEEETTTSTTHHHHHHHHHHTT---CEEE-EECSSCCHHHHHH-H---------------HT------T--CEEESSC
T ss_pred CEEEEEEEcHhhHHHHHHHHHhCC---CeEE-EEECCCCHHHHHH-H---------------HC------C--CEEECCC
Confidence 58999999999996 899998763 4544 4454111111111 0 11 1 2233234
Q ss_pred CCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCC
Q 024349 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGA 201 (269)
Q Consensus 166 ~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGa 201 (269)
++++++ ++|+||-+.|.-.+........+.|.
T Consensus 75 ~~~~~~----~~d~vV~Spgi~~~~p~~~~a~~~gi 106 (494)
T 4hv4_A 75 RPENVL----DASVVVVSTAISADNPEIVAAREARI 106 (494)
T ss_dssp CGGGGT----TCSEEEECTTSCTTCHHHHHHHHTTC
T ss_pred CHHHcC----CCCEEEECCCCCCCCHHHHHHHHCCC
Confidence 555542 68999999998877766666666665
No 299
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=61.64 E-value=7.8 Score=35.12 Aligned_cols=88 Identities=15% Similarity=0.071 Sum_probs=51.5
Q ss_pred eeEEEE-cC-ChHHHHHHHHHHhCCCCCceEE-EEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEe
Q 024349 87 LKVAIN-GF-GRIGRNFLRCWHGRKDSPLDVV-VVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (269)
Q Consensus 87 ikVaIn-Gf-GrIGR~llR~l~~r~~~~l~iV-aInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~ 163 (269)
..++|+ |+ |+.|+.+++.+.+.. +++| .||.. . .+.. +.| ++++.
T Consensus 14 ~siaVV~Gasg~~G~~~~~~l~~~G---~~~v~~VnP~-~------------------------~g~~--i~G--~~vy~ 61 (305)
T 2fp4_A 14 NTKVICQGFTGKQGTFHSQQALEYG---TNLVGGTTPG-K------------------------GGKT--HLG--LPVFN 61 (305)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHT---CEEEEEECTT-C------------------------TTCE--ETT--EEEES
T ss_pred CcEEEEECCCCCHHHHHHHHHHHCC---CcEEEEeCCC-c------------------------Ccce--ECC--eeeec
Confidence 357777 96 999999999887642 5655 44421 0 0000 233 22321
Q ss_pred cCCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecC
Q 024349 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (269)
Q Consensus 164 ~~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP 209 (269)
+.++++- +..+|+++-++......+-+...++.|++.+++-++
T Consensus 62 --sl~el~~-~~~vD~avI~vP~~~~~~~~~e~i~~Gi~~iv~~t~ 104 (305)
T 2fp4_A 62 --TVKEAKE-QTGATASVIYVPPPFAAAAINEAIDAEVPLVVCITE 104 (305)
T ss_dssp --SHHHHHH-HHCCCEEEECCCHHHHHHHHHHHHHTTCSEEEECCC
T ss_pred --hHHHhhh-cCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEEECC
Confidence 2222221 126788888888776677777777888887555333
No 300
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=61.62 E-value=6.9 Score=37.59 Aligned_cols=33 Identities=24% Similarity=0.508 Sum_probs=28.5
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~ 121 (269)
..+|+|-|||-+|+.+++.|.+. ...+|+|.|.
T Consensus 221 g~~vaVqG~GnVG~~aa~~l~e~---GakVVavsD~ 253 (424)
T 3k92_A 221 NARIIIQGFGNAGSFLAKFMHDA---GAKVIGISDA 253 (424)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHH---TCEEEEEECS
T ss_pred cCEEEEECCCHHHHHHHHHHHHC---CCEEEEEECC
Confidence 36899999999999999999875 2688999986
No 301
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=60.83 E-value=7.8 Score=33.89 Aligned_cols=35 Identities=17% Similarity=0.363 Sum_probs=27.8
Q ss_pred eeeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEcCC
Q 024349 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (269)
Q Consensus 86 ~ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaInd~ 121 (269)
+++|.|-| .|.||+.+++.|.++. ..++++++...
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~g-~~~~v~~~~~~ 59 (346)
T 4egb_A 24 AMNILVTGGAGFIGSNFVHYMLQSY-ETYKIINFDAL 59 (346)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHC-TTEEEEEEECC
T ss_pred CCeEEEECCccHHHHHHHHHHHhhC-CCcEEEEEecc
Confidence 46899999 8999999999998752 34788777543
No 302
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=60.77 E-value=16 Score=33.52 Aligned_cols=30 Identities=23% Similarity=0.203 Sum_probs=23.2
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCc-eEEEEc
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVN 119 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l-~iVaIn 119 (269)
-+|.|+|.|.||...++++... .. +++++.
T Consensus 215 ~~VlV~GaG~vG~~aiqlak~~---Ga~~Vi~~~ 245 (404)
T 3ip1_A 215 DNVVILGGGPIGLAAVAILKHA---GASKVILSE 245 (404)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHc---CCCEEEEEC
Confidence 4799999999999988877654 24 677664
No 303
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=60.45 E-value=9.6 Score=33.37 Aligned_cols=32 Identities=25% Similarity=0.245 Sum_probs=26.0
Q ss_pred eeeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 86 ~ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
+++|.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 25 ~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r 57 (351)
T 3ruf_A 25 PKTWLITGVAGFIGSNLLEKLLKLN---QVVIGLDN 57 (351)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEEC
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCC---CEEEEEeC
Confidence 46899999 9999999999998763 57766654
No 304
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=60.26 E-value=7.5 Score=36.73 Aligned_cols=32 Identities=13% Similarity=0.033 Sum_probs=24.8
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
.+.||+|+|+|+||+.+++.+.... .+|++++
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lG---a~V~v~D 214 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLG---AKTTGYD 214 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHT---CEEEEEC
T ss_pred CCCEEEEECchHHHHHHHHHHHHCC---CEEEEEe
Confidence 3468999999999999999887642 4665554
No 305
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=60.23 E-value=10 Score=32.92 Aligned_cols=31 Identities=26% Similarity=0.426 Sum_probs=25.2
Q ss_pred eeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 87 ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
++|.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~r 45 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAG---HDLVLIHR 45 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT---CEEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC---CEEEEEec
Confidence 5899999 9999999999998863 47666643
No 306
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=60.03 E-value=7.9 Score=34.29 Aligned_cols=33 Identities=24% Similarity=0.217 Sum_probs=26.4
Q ss_pred eeeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 86 ~ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
+++|.|-| .|.||+.+++.|.++. ..+|+++..
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~~--g~~V~~~~r 57 (372)
T 3slg_A 24 AKKVLILGVNGFIGHHLSKRILETT--DWEVFGMDM 57 (372)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHHS--SCEEEEEES
T ss_pred CCEEEEECCCChHHHHHHHHHHhCC--CCEEEEEeC
Confidence 46899999 9999999999998762 257776654
No 307
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=59.97 E-value=7.2 Score=37.32 Aligned_cols=34 Identities=24% Similarity=0.211 Sum_probs=26.5
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
+++||+|+|.|.+|..++..|.+.. ...+|++++
T Consensus 8 ~~mkI~VIG~G~vG~~~A~~La~~g-~g~~V~~~D 41 (481)
T 2o3j_A 8 KVSKVVCVGAGYVGGPTCAMIAHKC-PHITVTVVD 41 (481)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHHC-TTSEEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcC-CCCEEEEEE
Confidence 3469999999999999999887641 236777774
No 308
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=59.95 E-value=8.3 Score=33.02 Aligned_cols=30 Identities=17% Similarity=0.233 Sum_probs=24.1
Q ss_pred eeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 87 ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
++|.|.| +|.||+.+++.|.++. .+++++.
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g---~~V~~l~ 35 (308)
T 1qyc_A 5 SRILLIGATGYIGRHVAKASLDLG---HPTFLLV 35 (308)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTT---CCEEEEC
T ss_pred CEEEEEcCCcHHHHHHHHHHHhCC---CCEEEEE
Confidence 5799999 8999999999998763 4555543
No 309
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=59.93 E-value=11 Score=30.76 Aligned_cols=33 Identities=15% Similarity=0.135 Sum_probs=25.6
Q ss_pred eeeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 86 ~ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
+++|.|-| .|.||+.+++.|.++. ...+|+++.
T Consensus 4 ~~~ilVtGasG~iG~~l~~~l~~~~-~g~~V~~~~ 37 (253)
T 1xq6_A 4 LPTVLVTGASGRTGQIVYKKLKEGS-DKFVAKGLV 37 (253)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT-TTCEEEEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhcC-CCcEEEEEE
Confidence 45899999 9999999999998862 135666654
No 310
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=59.77 E-value=17 Score=34.49 Aligned_cols=31 Identities=26% Similarity=0.428 Sum_probs=24.7
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
..||+|+|.|.+|..++..|... .++|+.++
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~---G~~V~l~D 67 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARV---GISVVAVE 67 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT---TCEEEEEC
T ss_pred CCEEEEECcCHHHHHHHHHHHhC---CCeEEEEE
Confidence 45899999999999999988754 36766663
No 311
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=59.67 E-value=8.1 Score=37.11 Aligned_cols=31 Identities=19% Similarity=0.324 Sum_probs=25.9
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
.+|.|.|+|++|+.+++.|.+.. .++++|..
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g---~~v~vid~ 379 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKP---VPFILIDR 379 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT---CCEEEEES
T ss_pred CCEEEECCCHHHHHHHHHHHHCC---CCEEEEEC
Confidence 57999999999999999998753 57777754
No 312
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=59.62 E-value=9.2 Score=35.80 Aligned_cols=31 Identities=19% Similarity=0.111 Sum_probs=24.4
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
..+|+|+|+|+||+.+++.+.... .+|++++
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~G---a~V~v~D 202 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLG---AIVRAFD 202 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC---CEEEEEc
Confidence 468999999999999999887642 4665554
No 313
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=59.52 E-value=4.5 Score=39.55 Aligned_cols=92 Identities=21% Similarity=0.211 Sum_probs=51.8
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCC-ceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEec
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSP-LDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~-l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~ 164 (269)
+.||.|.|+|-||+.+++.+.++.+-. .+|+.+ |..+.. ..+.+ ..| ..+...+.
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~va-D~~~~~--~~~~~---~~g------------------~~~~~~~V 68 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEKFDIKPSQVTII-AAEGTK--VDVAQ---QYG------------------VSFKLQQI 68 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEE-ESSCCS--CCHHH---HHT------------------CEEEECCC
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEe-ccchhh--hhHHh---hcC------------------CceeEEec
Confidence 368999999999999999998764211 155555 331111 11111 001 01111110
Q ss_pred --CC----CCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEE
Q 024349 165 --RD----PLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVII 206 (269)
Q Consensus 165 --~~----P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVII 206 (269)
.+ .+.+ -++ + |+||.++-.+.+..-+..-+++|+ -.|
T Consensus 69 dadnv~~~l~aL-l~~-~-DvVIN~s~~~~~l~Im~acleaGv--~Yl 111 (480)
T 2ph5_A 69 TPQNYLEVIGST-LEE-N-DFLIDVSIGISSLALIILCNQKGA--LYI 111 (480)
T ss_dssp CTTTHHHHTGGG-CCT-T-CEEEECCSSSCHHHHHHHHHHHTC--EEE
T ss_pred cchhHHHHHHHH-hcC-C-CEEEECCccccCHHHHHHHHHcCC--CEE
Confidence 00 1111 122 4 999988777777788888899999 445
No 314
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=59.26 E-value=28 Score=33.09 Aligned_cols=83 Identities=22% Similarity=0.183 Sum_probs=51.2
Q ss_pred eeeEEEEcCC----hHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEE
Q 024349 86 KLKVAINGFG----RIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKV 161 (269)
Q Consensus 86 ~ikVaInGfG----rIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V 161 (269)
+.+|+|+|.+ ++|+.+++.|.+.. ..+|..||-. ++. +.|. ++
T Consensus 8 p~siAVvGas~~~~~~g~~v~~~l~~~g--~~~v~pVnP~-----------~~~------------------i~G~--~~ 54 (457)
T 2csu_A 8 PKGIAVIGASNDPKKLGYEVFKNLKEYK--KGKVYPVNIK-----------EEE------------------VQGV--KA 54 (457)
T ss_dssp CSEEEEETCCSCTTSHHHHHHHHHTTCC--SSEEEEECSS-----------CSE------------------ETTE--EC
T ss_pred CCeEEEECcCCCCCchHHHHHHHHHHcC--CCEEEEECCC-----------CCe------------------ECCE--ec
Confidence 4579999965 89999999987642 4577778732 111 1121 22
Q ss_pred EecCCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEE
Q 024349 162 VSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVII 206 (269)
Q Consensus 162 ~~~~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVII 206 (269)
+ .+.++++- .+|+++-++......+-+...++.|+|.+++
T Consensus 55 y--~sl~~lp~---~~Dlavi~vp~~~~~~~v~e~~~~Gi~~vv~ 94 (457)
T 2csu_A 55 Y--KSVKDIPD---EIDLAIIVVPKRFVKDTLIQCGEKGVKGVVI 94 (457)
T ss_dssp B--SSTTSCSS---CCSEEEECSCHHHHHHHHHHHHHHTCCEEEE
T ss_pred c--CCHHHcCC---CCCEEEEecCHHHHHHHHHHHHHcCCCEEEE
Confidence 2 23344432 5777777777666666666666777776554
No 315
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=59.22 E-value=13 Score=35.76 Aligned_cols=33 Identities=30% Similarity=0.379 Sum_probs=26.8
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
.+.+|.|.|+|++|+.+++.|.+. +.++++|..
T Consensus 126 ~~~hviI~G~g~~g~~la~~L~~~---~~~vvvid~ 158 (565)
T 4gx0_A 126 TRGHILIFGIDPITRTLIRKLESR---NHLFVVVTD 158 (565)
T ss_dssp CCSCEEEESCCHHHHHHHHHTTTT---TCCEEEEES
T ss_pred cCCeEEEECCChHHHHHHHHHHHC---CCCEEEEEC
Confidence 456899999999999999988764 357777754
No 316
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=59.04 E-value=9.8 Score=33.18 Aligned_cols=32 Identities=25% Similarity=0.225 Sum_probs=25.3
Q ss_pred ceeeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 85 ~~ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
|+++|.|-| .|.||+.+++.|.++. .+|+++.
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~ 33 (348)
T 1ek6_A 1 MAEKVLVTGGAGYIGSHTVLELLEAG---YLPVVID 33 (348)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTT---CCEEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEe
Confidence 345899999 9999999999998763 4666663
No 317
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=59.02 E-value=14 Score=33.97 Aligned_cols=23 Identities=13% Similarity=0.037 Sum_probs=19.9
Q ss_pred eeeEEEEcCChHHHHHHHHHHhC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGR 108 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r 108 (269)
..||+|.|.|.||..++..+..+
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~ 43 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMK 43 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC
Confidence 36899999999999999887764
No 318
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=58.55 E-value=6.9 Score=33.51 Aligned_cols=29 Identities=24% Similarity=0.237 Sum_probs=23.2
Q ss_pred eeEEEEc-CChHHHHHHHHHHhCCCCCceEEEE
Q 024349 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVV 118 (269)
Q Consensus 87 ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaI 118 (269)
++|.|.| .|.||+.+++.|.++. .+++++
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~ 32 (307)
T 2gas_A 3 NKILILGPTGAIGRHIVWASIKAG---NPTYAL 32 (307)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHHT---CCEEEE
T ss_pred cEEEEECCCchHHHHHHHHHHhCC---CcEEEE
Confidence 4799999 8999999999998753 355544
No 319
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=58.17 E-value=9.5 Score=36.50 Aligned_cols=32 Identities=25% Similarity=0.380 Sum_probs=28.1
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~ 121 (269)
.+|+|-|||-+|+.+++.|.+. ...+|+|.|.
T Consensus 219 k~vaVqG~GnVG~~~a~~L~~~---GakVVavsD~ 250 (419)
T 3aoe_E 219 ARVVVQGLGQVGAAVALHAERL---GMRVVAVATS 250 (419)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEEEET
T ss_pred CEEEEECcCHHHHHHHHHHHHC---CCEEEEEEcC
Confidence 5899999999999999999875 3699989886
No 320
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=57.75 E-value=11 Score=34.39 Aligned_cols=31 Identities=19% Similarity=0.283 Sum_probs=26.3
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
.+|+|.|.|.+|+.+++.+.+. .+++++++.
T Consensus 15 k~IlIlG~G~~g~~la~aa~~~---G~~vi~~d~ 45 (389)
T 3q2o_A 15 KTIGIIGGGQLGRMMALAAKEM---GYKIAVLDP 45 (389)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT---TCEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHc---CCEEEEEeC
Confidence 4899999999999999998864 378888863
No 321
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=57.68 E-value=10 Score=33.95 Aligned_cols=30 Identities=17% Similarity=0.161 Sum_probs=23.5
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
+||+|+|.|.+|..++..|.+.. .+|..+.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g---~~V~~~~ 33 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAG---EAINVLA 33 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTT---CCEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHHCC---CEEEEEE
Confidence 58999999999999999887642 3555554
No 322
>2y1e_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase, DOXP/MEP pathway; 1.65A {Mycobacterium tuberculosis} PDB: 2jcv_A* 2jcz_A* 2jd2_A 2jd1_A 2y1d_A* 2y1c_A 2y1f_A* 2y1g_A* 3ras_A* 4a03_A* 4aic_A* 2jcx_A* 2jcy_A 2jd0_A* 2c82_A
Probab=57.41 E-value=11 Score=35.91 Aligned_cols=44 Identities=20% Similarity=0.322 Sum_probs=33.4
Q ss_pred eeeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEcC-CCCccccccc
Q 024349 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND-SGGVKNASHL 130 (269)
Q Consensus 86 ~ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaInd-~~~~~~~a~L 130 (269)
+.+|.|.| +|-||.+-|+++...+ ++++|+++.- ..+++.++..
T Consensus 21 mk~i~ILGSTGSIGtqtLdVi~~~p-d~f~V~aLaa~g~nv~~L~~q 66 (398)
T 2y1e_A 21 RLRVVVLGSTGSIGTQALQVIADNP-DRFEVVGLAAGGAHLDTLLRQ 66 (398)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCT-TTEEEEEEEECSSCHHHHHHH
T ss_pred ceEEEEEccCcHHHHHHHHHHHhCC-CceEEEEEEecCCCHHHHHHH
Confidence 35899999 9999999999887653 4689999876 4455555433
No 323
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=57.38 E-value=11 Score=34.81 Aligned_cols=32 Identities=16% Similarity=0.151 Sum_probs=24.6
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
...+|+|.|+|+||+.+++.+.... .+|++++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~G---a~V~~~d 202 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLG---AVVMATD 202 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC---CEEEEEe
Confidence 3468999999999999999887642 4655554
No 324
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=57.27 E-value=8.4 Score=34.45 Aligned_cols=30 Identities=23% Similarity=0.224 Sum_probs=23.4
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCc-eEEEEc
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVN 119 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l-~iVaIn 119 (269)
-+|.|+|.|.||..+++++..+. . +++++.
T Consensus 169 ~~VlV~GaG~vG~~~~q~a~~~G---a~~Vi~~~ 199 (348)
T 2d8a_A 169 KSVLITGAGPLGLLGIAVAKASG---AYPVIVSE 199 (348)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT---CCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CCEEEEEC
Confidence 37999999999999999877542 4 666664
No 325
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=57.08 E-value=6.6 Score=35.72 Aligned_cols=24 Identities=21% Similarity=0.252 Sum_probs=20.3
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhC
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGR 108 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r 108 (269)
|++||+|+|.|.+|..++..|...
T Consensus 20 ~~~kI~iIGaG~mG~alA~~L~~~ 43 (375)
T 1yj8_A 20 GPLKISILGSGNWASAISKVVGTN 43 (375)
T ss_dssp SCBCEEEECCSHHHHHHHHHHHHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHHc
Confidence 346899999999999999988753
No 326
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=56.89 E-value=12 Score=34.90 Aligned_cols=97 Identities=12% Similarity=0.100 Sum_probs=52.4
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCc--eEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEe-
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPL--DVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS- 163 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l--~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~- 163 (269)
.||+|.|.|.||+.+++.|.++. .+ +++.. +. +.+....+.+ .++.. + +..+..+.
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g--~~~~~V~v~-~r-~~~~~~~la~---~l~~~--------~------~~~~~~~~~ 60 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNR--EVFSHITLA-SR-TLSKCQEIAQ---SIKAK--------G------YGEIDITTV 60 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCT--TTCCEEEEE-ES-CHHHHHHHHH---HHHHT--------T------CCCCEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCC--CCceEEEEE-EC-CHHHHHHHHH---Hhhhh--------c------CCceEEEEe
Confidence 58999999999999999998653 23 44333 33 2222221211 01000 0 00011111
Q ss_pred -cCCCCCCC--CCCCCccEEEEcCCCCCChhhHHHHHHcCCCEE
Q 024349 164 -NRDPLQLP--WAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKV 204 (269)
Q Consensus 164 -~~~P~~i~--w~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkV 204 (269)
..+++.+. ..+.++|+||.|+|.+...+-+...+++|+.-+
T Consensus 61 D~~d~~~l~~~l~~~~~DvVin~ag~~~~~~v~~a~l~~g~~vv 104 (405)
T 4ina_A 61 DADSIEELVALINEVKPQIVLNIALPYQDLTIMEACLRTGVPYL 104 (405)
T ss_dssp CTTCHHHHHHHHHHHCCSEEEECSCGGGHHHHHHHHHHHTCCEE
T ss_pred cCCCHHHHHHHHHhhCCCEEEECCCcccChHHHHHHHHhCCCEE
Confidence 01111110 011248999999999887777778888898643
No 327
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=56.73 E-value=7.4 Score=34.69 Aligned_cols=130 Identities=15% Similarity=0.106 Sum_probs=66.4
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEecCC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRD 166 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~~~ 166 (269)
-+|.|+|.|.||...++++.... ..+++++.. +.+.+..+.+ +|. +. ++..++
T Consensus 173 ~~vlv~GaG~vG~~a~qla~~~g--~~~Vi~~~~--~~~~~~~~~~----lGa---~~----------------~i~~~~ 225 (345)
T 3jv7_A 173 STAVVIGVGGLGHVGIQILRAVS--AARVIAVDL--DDDRLALARE----VGA---DA----------------AVKSGA 225 (345)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC--CCEEEEEES--CHHHHHHHHH----TTC---SE----------------EEECST
T ss_pred CEEEEECCCHHHHHHHHHHHHcC--CCEEEEEcC--CHHHHHHHHH----cCC---CE----------------EEcCCC
Confidence 47999999999998888775431 247777743 2233332222 121 10 111010
Q ss_pred CCCCCC--------CCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecCCCCCCCCeEEeecCccccCCCCCceEEcC
Q 024349 167 PLQLPW--------AELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNA 238 (269)
Q Consensus 167 P~~i~w--------~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP~k~~Dip~iV~GVN~~~~~~~~~~IISna 238 (269)
+| ...++|+||||+|.-...+.+-..++.|-+ +++-+...+ . +.- ++...+..+ ..+...-
T Consensus 226 ----~~~~~v~~~t~g~g~d~v~d~~G~~~~~~~~~~~l~~~G~-iv~~G~~~~-~-~~~---~~~~~~~~~-~~i~g~~ 294 (345)
T 3jv7_A 226 ----GAADAIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVDGH-ISVVGIHAG-A-HAK---VGFFMIPFG-ASVVTPY 294 (345)
T ss_dssp ----THHHHHHHHHGGGCEEEEEESSCCHHHHHHHHHHEEEEEE-EEECSCCTT-C-CEE---ESTTTSCTT-CEEECCC
T ss_pred ----cHHHHHHHHhCCCCCeEEEECCCCHHHHHHHHHHHhcCCE-EEEECCCCC-C-CCC---cCHHHHhCC-CEEEEEe
Confidence 22 123899999999975444555556665542 333332211 1 211 232333333 4454443
Q ss_pred ChhHHhHHHHHHHHhh
Q 024349 239 SCTTNCLAPFVKVMDE 254 (269)
Q Consensus 239 SCTTn~LaPvlkvL~d 254 (269)
.-+-..+.-+++.+.+
T Consensus 295 ~~~~~~~~~~~~l~~~ 310 (345)
T 3jv7_A 295 WGTRSELMEVVALARA 310 (345)
T ss_dssp SCCHHHHHHHHHHHHT
T ss_pred cCCHHHHHHHHHHHHc
Confidence 3344566666666654
No 328
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=56.43 E-value=12 Score=33.74 Aligned_cols=74 Identities=20% Similarity=0.201 Sum_probs=44.6
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEecCC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRD 166 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~~~ 166 (269)
.||+|.|.|.+|..+++.+. . .+++++.+- +.+.+..++++ + . + ..+ + .++. ..+
T Consensus 13 ~~V~vIG~G~MG~~iA~~la-a---G~~V~v~d~--~~~~~~~~~~~------l-----~-~-~~~--~--~i~~--~~~ 67 (293)
T 1zej_A 13 MKVFVIGAGLMGRGIAIAIA-S---KHEVVLQDV--SEKALEAAREQ------I-----P-E-ELL--S--KIEF--TTT 67 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHH-T---TSEEEEECS--CHHHHHHHHHH------S-----C-G-GGG--G--GEEE--ESS
T ss_pred CeEEEEeeCHHHHHHHHHHH-c---CCEEEEEEC--CHHHHHHHHHH------H-----H-H-HHh--C--CeEE--eCC
Confidence 58999999999999999988 5 268776653 33333333322 0 0 0 000 0 1222 235
Q ss_pred CCCCCCCCCCccEEEEcCCCCCC
Q 024349 167 PLQLPWAELGIDIVIEGTGVFVD 189 (269)
Q Consensus 167 P~~i~w~~~gvDiVve~TG~f~~ 189 (269)
++.+ .++|+||||...-.+
T Consensus 68 ~~~~----~~aDlVieavpe~~~ 86 (293)
T 1zej_A 68 LEKV----KDCDIVMEAVFEDLN 86 (293)
T ss_dssp CTTG----GGCSEEEECCCSCHH
T ss_pred HHHH----cCCCEEEEcCcCCHH
Confidence 5533 488999999887654
No 329
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=56.37 E-value=8.2 Score=32.62 Aligned_cols=24 Identities=13% Similarity=0.404 Sum_probs=21.1
Q ss_pred ceeeEEEEc-CChHHHHHHHHHHhC
Q 024349 85 AKLKVAING-FGRIGRNFLRCWHGR 108 (269)
Q Consensus 85 ~~ikVaInG-fGrIGR~llR~l~~r 108 (269)
++++|.|-| .|.||+.+++.|.++
T Consensus 5 ~~~~vlVtGatG~iG~~l~~~L~~~ 29 (319)
T 4b8w_A 5 QSMRILVTGGSGLVGKAIQKVVADG 29 (319)
T ss_dssp CCCEEEEETCSSHHHHHHHHHHHTT
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhc
Confidence 346899999 999999999999875
No 330
>1q0q_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase; HET: DXP NDP; 1.90A {Escherichia coli} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1q0l_A* 1q0h_A* 3r0i_A* 1k5h_A 1onn_A 1ono_A 1onp_A* 1jvs_A* 1t1r_A* 1t1s_A* 2egh_A* 3anm_A* 3anl_A* 3ann_A* 3iie_A
Probab=56.17 E-value=10 Score=36.29 Aligned_cols=43 Identities=21% Similarity=0.223 Sum_probs=32.8
Q ss_pred eeeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccc
Q 024349 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASH 129 (269)
Q Consensus 86 ~ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~ 129 (269)
+.+|.|.| +|-||.+-++++...+ ++++|+++.-..+++.++.
T Consensus 9 ~k~i~ILGSTGSIGtqtLdVi~~~p-d~f~V~aL~ag~nv~~L~~ 52 (406)
T 1q0q_A 9 MKQLTILGSTGSIGCSTLDVVRHNP-EHFRVVALVAGKNVTRMVE 52 (406)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCT-TTEEEEEEEESSCHHHHHH
T ss_pred ceeEEEEccCcHHHHHHHHHHHhCC-CccEEEEEEcCCCHHHHHH
Confidence 35899999 9999999999887653 4689988866545555443
No 331
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=56.06 E-value=12 Score=35.72 Aligned_cols=31 Identities=16% Similarity=0.081 Sum_probs=24.4
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCCCCCceEEEE
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVV 118 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaI 118 (269)
.+.||+|+|+|+||+.+++.+.... .+|++.
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lG---a~V~v~ 219 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLG---AVVSAT 219 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT---CEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCC---CEEEEE
Confidence 3578999999999999999987642 465544
No 332
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=55.91 E-value=11 Score=33.20 Aligned_cols=31 Identities=19% Similarity=0.168 Sum_probs=24.6
Q ss_pred eeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 87 ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
++|.|-| .|.||+.+++.|.++. .+++++..
T Consensus 11 ~~IlVtGatG~iG~~l~~~L~~~g---~~V~~l~R 42 (346)
T 3i6i_A 11 GRVLIAGATGFIGQFVATASLDAH---RPTYILAR 42 (346)
T ss_dssp CCEEEECTTSHHHHHHHHHHHHTT---CCEEEEEC
T ss_pred CeEEEECCCcHHHHHHHHHHHHCC---CCEEEEEC
Confidence 5899999 8999999999998763 45555543
No 333
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=55.67 E-value=13 Score=32.16 Aligned_cols=31 Identities=32% Similarity=0.437 Sum_probs=25.1
Q ss_pred eeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 87 ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
++|.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~r 33 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVDEG---LSVVVVDN 33 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCC---CEEEEEeC
Confidence 5899999 9999999999998763 57766643
No 334
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=55.19 E-value=30 Score=31.83 Aligned_cols=36 Identities=17% Similarity=0.116 Sum_probs=27.3
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCC
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~ 121 (269)
|..||+|+|-|.-|-..++.|..+ ..+.+|+.|++.
T Consensus 1 M~K~VvIIGgG~aGl~aA~~L~~~-~~~~~VtlI~~~ 36 (430)
T 3hyw_A 1 MAKHVVVIGGGVGGIATAYNLRNL-MPDLKITLISDR 36 (430)
T ss_dssp -CCEEEEECSSHHHHHHHHHHHHH-CTTCEEEEECSS
T ss_pred CCCcEEEECCCHHHHHHHHHHhcc-CcCCeEEEEcCC
Confidence 334799999999999888877643 345888888753
No 335
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=54.94 E-value=12 Score=33.90 Aligned_cols=31 Identities=23% Similarity=0.316 Sum_probs=24.2
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
..||+|+|.|.+|..++..+... .++|+..+
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~---G~~V~l~d 36 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASG---GFRVKLYD 36 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT---TCCEEEEC
T ss_pred CceEEEEeeCHHHHHHHHHHHHC---CCEEEEEe
Confidence 35899999999999999988764 25766553
No 336
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=54.84 E-value=13 Score=34.10 Aligned_cols=31 Identities=26% Similarity=0.329 Sum_probs=24.9
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
..+|+|.|.|.||+.+++.+.... .+|++++
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~G---a~V~~~d 196 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMG---AQVTILD 196 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC---CEEEEEE
Confidence 468999999999999999987652 4766664
No 337
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=54.38 E-value=14 Score=32.05 Aligned_cols=30 Identities=27% Similarity=0.473 Sum_probs=24.7
Q ss_pred eeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 87 ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
++|.|-| .|.||+.+++.|.++. .+|+++.
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g---~~V~~~~ 32 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQG---IDLIVFD 32 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred cEEEEeCCCchhHHHHHHHHHhCC---CEEEEEe
Confidence 4799999 9999999999998753 5777664
No 338
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=54.34 E-value=8.4 Score=32.97 Aligned_cols=33 Identities=21% Similarity=0.321 Sum_probs=24.6
Q ss_pred eeeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 86 ~ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
.++|.|-| .|.||+.+++.|.++. +..+|+++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~-~g~~V~~~~ 35 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLY-GTENVIASD 35 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHH-CGGGEEEEE
T ss_pred CceEEEECCccHHHHHHHHHHHHhC-CCCEEEEEc
Confidence 35799999 8999999999998751 124666654
No 339
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=54.32 E-value=11 Score=33.04 Aligned_cols=31 Identities=16% Similarity=0.179 Sum_probs=24.7
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
.+|+|.|.|.+|+.+++.|.+.. .++..++.
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g---~~V~v~~r 160 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEG---AKVFLWNR 160 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHT---CEEEEECS
T ss_pred CEEEEECchHHHHHHHHHHHHcC---CEEEEEEC
Confidence 58999999999999999988652 46665553
No 340
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=54.01 E-value=17 Score=32.76 Aligned_cols=132 Identities=14% Similarity=0.123 Sum_probs=66.3
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEecCC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRD 166 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~~~ 166 (269)
-+|.|.|.|.||...++++..+. .+++++.. +.+.+..+.+ +|. +. ++...+
T Consensus 191 ~~VlV~G~G~vG~~a~qla~~~G---a~Vi~~~~--~~~~~~~~~~----lGa---~~----------------vi~~~~ 242 (363)
T 3uog_A 191 DRVVVQGTGGVALFGLQIAKATG---AEVIVTSS--SREKLDRAFA----LGA---DH----------------GINRLE 242 (363)
T ss_dssp CEEEEESSBHHHHHHHHHHHHTT---CEEEEEES--CHHHHHHHHH----HTC---SE----------------EEETTT
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CEEEEEec--CchhHHHHHH----cCC---CE----------------EEcCCc
Confidence 47999999999999988876542 47777643 2233322211 221 10 111000
Q ss_pred CC---CC-CC-CCCCccEEEEcCCCCCChhhHHHHHHcCCCEEEEecCCCCCCCCeEEeecCccc-cCCCCCceEEcCCh
Q 024349 167 PL---QL-PW-AELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKD-YDHEVANIVSNASC 240 (269)
Q Consensus 167 P~---~i-~w-~~~gvDiVve~TG~f~~~e~a~~Hl~aGakkVIISAP~k~~Dip~iV~GVN~~~-~~~~~~~IISnaSC 240 (269)
++ .+ .. ...|+|+||||+|. ...+.+-..++.|-+-|++..+.. +.. .++... +..+ ..+...-..
T Consensus 243 ~~~~~~v~~~~~g~g~D~vid~~g~-~~~~~~~~~l~~~G~iv~~G~~~~----~~~--~~~~~~~~~~~-~~i~g~~~~ 314 (363)
T 3uog_A 243 EDWVERVYALTGDRGADHILEIAGG-AGLGQSLKAVAPDGRISVIGVLEG----FEV--SGPVGPLLLKS-PVVQGISVG 314 (363)
T ss_dssp SCHHHHHHHHHTTCCEEEEEEETTS-SCHHHHHHHEEEEEEEEEECCCSS----CEE--CCBTTHHHHTC-CEEEECCCC
T ss_pred ccHHHHHHHHhCCCCceEEEECCCh-HHHHHHHHHhhcCCEEEEEecCCC----ccc--CcCHHHHHhCC-cEEEEEecC
Confidence 10 00 00 12389999999994 444555566665443333333221 111 222222 2222 445554444
Q ss_pred hHHhHHHHHHHHhh
Q 024349 241 TTNCLAPFVKVMDE 254 (269)
Q Consensus 241 TTn~LaPvlkvL~d 254 (269)
+...+..+++.+.+
T Consensus 315 ~~~~~~~~~~l~~~ 328 (363)
T 3uog_A 315 HRRALEDLVGAVDR 328 (363)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHc
Confidence 45667777777665
No 341
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=53.72 E-value=12 Score=34.57 Aligned_cols=87 Identities=21% Similarity=0.192 Sum_probs=49.2
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEecCC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRD 166 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~~~ 166 (269)
.||+|.|.|.+|+.+++.|.+. .++.+.+ . +.+.+..+.+ . + ..+.+ ...+
T Consensus 17 ~~v~IiGaG~iG~~ia~~L~~~----~~V~V~~-R-~~~~a~~la~--~----~----------------~~~~~-d~~~ 67 (365)
T 2z2v_A 17 MKVLILGAGNIGRAIAWDLKDE----FDVYIGD-V-NNENLEKVKE--F----A----------------TPLKV-DASN 67 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT----SEEEEEE-S-CHHHHHHHTT--T----S----------------EEEEC-CTTC
T ss_pred CeEEEEcCCHHHHHHHHHHHcC----CeEEEEE-C-CHHHHHHHHh--h----C----------------CeEEE-ecCC
Confidence 5899999999999999998754 4654443 3 3333322221 0 0 00111 0011
Q ss_pred CCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCC
Q 024349 167 PLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAK 202 (269)
Q Consensus 167 P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGak 202 (269)
++.+.=--.++|+||.|++.....+-+...+++|+.
T Consensus 68 ~~~l~~ll~~~DvVIn~~P~~~~~~v~~a~l~~G~~ 103 (365)
T 2z2v_A 68 FDKLVEVMKEFELVIGALPGFLGFKSIKAAIKSKVD 103 (365)
T ss_dssp HHHHHHHHTTCSCEEECCCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHhCCCEEEECCChhhhHHHHHHHHHhCCe
Confidence 111000002689999998876666666677888873
No 342
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=52.68 E-value=21 Score=31.38 Aligned_cols=30 Identities=20% Similarity=0.248 Sum_probs=22.7
Q ss_pred eEEEEcC-ChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 88 KVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 88 kVaInGf-GrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
+|.|.|- |.||...++++..+. .+++++..
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~G---a~vi~~~~ 182 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRG---YTVEASTG 182 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTT---CCEEEEES
T ss_pred eEEEecCCCHHHHHHHHHHHHCC---CEEEEEEC
Confidence 6999995 999999998876542 46666654
No 343
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=52.47 E-value=15 Score=32.59 Aligned_cols=33 Identities=15% Similarity=0.148 Sum_probs=25.7
Q ss_pred ceeeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 85 ~~ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
|+.+|.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 23 M~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r 56 (375)
T 1t2a_A 23 MRNVALITGITGQDGSYLAEFLLEKG---YEVHGIVR 56 (375)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEEC
T ss_pred cCcEEEEECCCchHHHHHHHHHHHCC---CEEEEEEC
Confidence 446899999 9999999999998763 47766643
No 344
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=52.38 E-value=16 Score=31.30 Aligned_cols=31 Identities=26% Similarity=0.498 Sum_probs=24.9
Q ss_pred eeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 87 ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
+||.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r 32 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELG---YEVVVVDN 32 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHhCC---CEEEEEeC
Confidence 3799999 8999999999998763 47766643
No 345
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=52.28 E-value=9.8 Score=33.85 Aligned_cols=23 Identities=30% Similarity=0.381 Sum_probs=20.0
Q ss_pred eeeEEEEcCChHHHHHHHHHHhC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGR 108 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r 108 (269)
++||+|+|.|.+|..+++.|...
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~ 30 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGN 30 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhc
Confidence 36899999999999999988753
No 346
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=52.09 E-value=15 Score=32.03 Aligned_cols=32 Identities=22% Similarity=0.358 Sum_probs=25.8
Q ss_pred eeeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 86 ~ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
+++|.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 27 ~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r 59 (343)
T 2b69_A 27 RKRILITGGAGFVGSHLTDKLMMDG---HEVTVVDN 59 (343)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEEC
T ss_pred CCEEEEEcCccHHHHHHHHHHHHCC---CEEEEEeC
Confidence 46899999 8999999999998763 57766643
No 347
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=52.07 E-value=13 Score=34.56 Aligned_cols=29 Identities=24% Similarity=0.378 Sum_probs=23.6
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
+||+|+|.|.+|..++..|.+ + .+++++.
T Consensus 1 MkI~VIG~G~vG~~~A~~La~--G--~~V~~~d 29 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL--Q--NEVTIVD 29 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT--T--SEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHhC--C--CEEEEEE
Confidence 489999999999999998874 2 5777764
No 348
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=51.79 E-value=6.9 Score=33.09 Aligned_cols=31 Identities=13% Similarity=0.184 Sum_probs=24.3
Q ss_pred eeeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 86 ~ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
+.+|.|-| .|.||+.+++.|.++. .+|+++.
T Consensus 2 ~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~ 33 (267)
T 3ay3_A 2 LNRLLVTGAAGGVGSAIRPHLGTLA---HEVRLSD 33 (267)
T ss_dssp EEEEEEESTTSHHHHHHGGGGGGTE---EEEEECC
T ss_pred CceEEEECCCCHHHHHHHHHHHhCC---CEEEEEe
Confidence 45899999 8999999999888652 4665554
No 349
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=51.55 E-value=8.2 Score=34.76 Aligned_cols=30 Identities=27% Similarity=0.248 Sum_probs=23.2
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
-+|.|+|.|.||...++++..+. .+++++.
T Consensus 181 ~~VlV~GaG~vG~~~~qlak~~G---a~Vi~~~ 210 (360)
T 1piw_A 181 KKVGIVGLGGIGSMGTLISKAMG---AETYVIS 210 (360)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT---CEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CEEEEEc
Confidence 47999999999999888776542 4677665
No 350
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=51.53 E-value=14 Score=31.79 Aligned_cols=30 Identities=27% Similarity=0.283 Sum_probs=23.8
Q ss_pred eeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 87 ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
++|.|-| .|.||+.+++.|.++. .+++++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~L~~~g---~~v~~~~ 34 (321)
T 1e6u_A 4 QRVFIAGHRGMVGSAIRRQLEQRG---DVELVLR 34 (321)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCT---TEEEECC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCC---CeEEEEe
Confidence 5899999 9999999999998752 4655543
No 351
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=51.16 E-value=15 Score=35.05 Aligned_cols=30 Identities=23% Similarity=0.315 Sum_probs=24.3
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
++||+|.|.|.+|..++..|.+ + .+|++++
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~--G--~~V~~~D 65 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ--N--HEVVALD 65 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT--T--SEEEEEC
T ss_pred CCEEEEECcCHHHHHHHHHHHc--C--CeEEEEe
Confidence 4699999999999999997764 2 6877764
No 352
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=51.02 E-value=13 Score=32.95 Aligned_cols=32 Identities=22% Similarity=0.329 Sum_probs=23.5
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
+||+|.|.|.+|..++..|..+.. .-+++.++
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~-~~~V~l~d 33 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGV-ADDYVFID 33 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTC-CSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-CCEEEEEc
Confidence 589999999999999998876421 12555443
No 353
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=50.76 E-value=17 Score=31.37 Aligned_cols=33 Identities=12% Similarity=0.107 Sum_probs=25.6
Q ss_pred ceeeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 85 ~~ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
+.++|.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 13 ~~~~vlVTGatG~iG~~l~~~L~~~g---~~V~~~~r 46 (335)
T 1rpn_A 13 MTRSALVTGITGQDGAYLAKLLLEKG---YRVHGLVA 46 (335)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEEC
T ss_pred cCCeEEEECCCChHHHHHHHHHHHCC---CeEEEEeC
Confidence 446899999 9999999999998763 47766644
No 354
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=50.61 E-value=17 Score=32.57 Aligned_cols=32 Identities=25% Similarity=0.262 Sum_probs=25.6
Q ss_pred eeeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 86 ~ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
+++|.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 29 ~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r 61 (379)
T 2c5a_A 29 NLKISITGAGGFIASHIARRLKHEG---HYVIASDW 61 (379)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CCeEEEECCccHHHHHHHHHHHHCC---CeEEEEEC
Confidence 46899999 8999999999998763 47666643
No 355
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=50.51 E-value=12 Score=37.66 Aligned_cols=107 Identities=16% Similarity=0.114 Sum_probs=53.6
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCC--CCcccccc--cccccccccccCceEEEecCCeEEEC-CEEEEE
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS--GGVKNASH--LLKYDSLLGTFKADVKIVDNETISVD-GKLIKV 161 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~--~~~~~~a~--LlkyDS~hG~f~g~v~~~~~~~L~in-Gk~I~V 161 (269)
.+|.|+|.|.+|-.++..|.... +.-+.|-|. .++..+.. |+..+ .-|+....+.. ..-..+| +-.|..
T Consensus 18 s~VlVVGaGGLGsevak~La~aG---VG~ItlvD~D~Ve~SNLnRQflf~~~-dVGk~KAeaaa--~~L~~iNP~v~V~a 91 (640)
T 1y8q_B 18 GRVLVVGAGGIGCELLKNLVLTG---FSHIDLIDLDTIDVSNLNRQFLFQKK-HVGRSKAQVAK--ESVLQFYPKANIVA 91 (640)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT---CCEEEEEECCBCCGGGGGTCTTCCGG-GTTSBHHHHHH--HHHHTTCTTCEEEE
T ss_pred CeEEEECcCHHHHHHHHHHHHcC---CCeEEEecCCEEChhhcCCCcCCChh-HcChHHHHHHH--HHHHHHCCCCeEEE
Confidence 58999999999999999887432 322223343 23333322 22222 23443322211 0000122 223444
Q ss_pred EecC-CCCCCC---CCCCCccEEEEcCCCCCChhhHHHHH-HcCC
Q 024349 162 VSNR-DPLQLP---WAELGIDIVIEGTGVFVDGPGAGKHI-QAGA 201 (269)
Q Consensus 162 ~~~~-~P~~i~---w~~~gvDiVve~TG~f~~~e~a~~Hl-~aGa 201 (269)
+..+ .+.+++ | .+.|+||+|+..+..+....... +.|.
T Consensus 92 ~~~~i~~~~~~~~~~--~~~DlVvda~Dn~~aR~~ln~~c~~~~i 134 (640)
T 1y8q_B 92 YHDSIMNPDYNVEFF--RQFILVMNALDNRAARNHVNRMCLAADV 134 (640)
T ss_dssp EESCTTSTTSCHHHH--TTCSEEEECCSCHHHHHHHHHHHHHHTC
T ss_pred EecccchhhhhHhhh--cCCCEEEECCCCHHHHHHHHHHHHHcCC
Confidence 4322 112221 3 37899999998876665554433 3455
No 356
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=50.39 E-value=16 Score=35.04 Aligned_cols=31 Identities=23% Similarity=0.351 Sum_probs=25.4
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
.+||+|+|.|.+|..++.+|.+.. .+|++++
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G---~~V~~~d 38 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIG---HDVFCLD 38 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CceEEEECcCHHHHHHHHHHHhCC---CEEEEEE
Confidence 479999999999999999888642 5777774
No 357
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=50.34 E-value=18 Score=31.75 Aligned_cols=31 Identities=19% Similarity=0.255 Sum_probs=24.8
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
+||+|+|-|..|-.++..|..+ .++++.+..
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~---G~~v~v~Er 32 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKH---GIKVTIYER 32 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHhC---CCCEEEEec
Confidence 6899999999999988888754 367777743
No 358
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=50.29 E-value=18 Score=31.80 Aligned_cols=31 Identities=29% Similarity=0.302 Sum_probs=25.1
Q ss_pred eeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 87 ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
++|.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 28 ~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r 59 (352)
T 1sb8_A 28 KVWLITGVAGFIGSNLLETLLKLD---QKVVGLDN 59 (352)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEEC
T ss_pred CeEEEECCCcHHHHHHHHHHHHCC---CEEEEEeC
Confidence 5899999 8999999999998763 46666643
No 359
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=50.01 E-value=16 Score=32.83 Aligned_cols=30 Identities=17% Similarity=0.247 Sum_probs=22.4
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCc-eEEEEc
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVN 119 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l-~iVaIn 119 (269)
-+|.|.|.|.||...++++.... . +|+++.
T Consensus 193 ~~VlV~GaG~vG~~aiqlak~~G---a~~Vi~~~ 223 (373)
T 1p0f_A 193 STCAVFGLGGVGFSAIVGCKAAG---ASRIIGVG 223 (373)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT---CSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CCeEEEEC
Confidence 47999999999998888765432 3 566664
No 360
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=49.83 E-value=18 Score=31.60 Aligned_cols=31 Identities=32% Similarity=0.378 Sum_probs=25.2
Q ss_pred eeeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 86 ~ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
+++|.|-| .|.||+.+++.|.++. .+|+++.
T Consensus 21 ~~~vlVTGatG~iG~~l~~~L~~~g---~~V~~~~ 52 (333)
T 2q1w_A 21 MKKVFITGICGQIGSHIAELLLERG---DKVVGID 52 (333)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCC---CEEEEEE
Confidence 35899999 9999999999998763 5776664
No 361
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=49.70 E-value=18 Score=32.22 Aligned_cols=32 Identities=25% Similarity=0.368 Sum_probs=23.9
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
.++||+|+|.|.+|..++..|.+.. .+|..+.
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G---~~V~l~~ 49 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAG---HEVILIA 49 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCC---CeEEEEE
Confidence 3579999999999999999887642 4665553
No 362
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=49.63 E-value=15 Score=31.46 Aligned_cols=31 Identities=26% Similarity=0.259 Sum_probs=24.5
Q ss_pred eeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 87 ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
++|.|-| .|.||+.+++.|.++. ..+|+++.
T Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g--~~~V~~~~ 37 (299)
T 2wm3_A 6 KLVVVFGGTGAQGGSVARTLLEDG--TFKVRVVT 37 (299)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHC--SSEEEEEE
T ss_pred CEEEEECCCchHHHHHHHHHHhcC--CceEEEEE
Confidence 5799999 8999999999998752 24666654
No 363
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=49.60 E-value=53 Score=30.68 Aligned_cols=85 Identities=27% Similarity=0.307 Sum_probs=52.1
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCCCCc---ccccccccccccccccCceEEEecCCeEEECCEEEEEEe
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGV---KNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~~~~---~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~ 163 (269)
.||.|.|.|..|..++|.|.++. .+|.+. |.... .... .|+ + .| |++..
T Consensus 10 k~v~viG~G~sG~s~A~~l~~~G---~~V~~~-D~~~~~~~~~~~-~L~---------------~------~g--i~~~~ 61 (451)
T 3lk7_A 10 KKVLVLGLARSGEAAARLLAKLG---AIVTVN-DGKPFDENPTAQ-SLL---------------E------EG--IKVVC 61 (451)
T ss_dssp CEEEEECCTTTHHHHHHHHHHTT---CEEEEE-ESSCGGGCHHHH-HHH---------------H------TT--CEEEE
T ss_pred CEEEEEeeCHHHHHHHHHHHhCC---CEEEEE-eCCcccCChHHH-HHH---------------h------CC--CEEEE
Confidence 58999999999999999998763 464443 43111 1111 110 1 11 22333
Q ss_pred cCCCCCCCCCCCC-ccEEEEcCCCCCChhhHHHHHHcCCC
Q 024349 164 NRDPLQLPWAELG-IDIVIEGTGVFVDGPGAGKHIQAGAK 202 (269)
Q Consensus 164 ~~~P~~i~w~~~g-vDiVve~TG~f~~~e~a~~Hl~aGak 202 (269)
..+|+++ + .+ +|+||-+.|.-.+........+.|.+
T Consensus 62 g~~~~~~-~--~~~~d~vv~spgi~~~~p~~~~a~~~gi~ 98 (451)
T 3lk7_A 62 GSHPLEL-L--DEDFCYMIKNPGIPYNNPMVKKALEKQIP 98 (451)
T ss_dssp SCCCGGG-G--GSCEEEEEECTTSCTTSHHHHHHHHTTCC
T ss_pred CCChHHh-h--cCCCCEEEECCcCCCCChhHHHHHHCCCc
Confidence 3345432 1 14 89999999998887777777777774
No 364
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=49.46 E-value=18 Score=31.33 Aligned_cols=30 Identities=13% Similarity=0.172 Sum_probs=23.9
Q ss_pred ceeeEEEEc-CChHHHHHHHHHHhCCCCCceEEE
Q 024349 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVV 117 (269)
Q Consensus 85 ~~ikVaInG-fGrIGR~llR~l~~r~~~~l~iVa 117 (269)
|..+|.|-| .|.||+.+++.|.++. .+|++
T Consensus 8 ~~~~vlVTGatGfIG~~l~~~Ll~~G---~~V~~ 38 (338)
T 2rh8_A 8 GKKTACVVGGTGFVASLLVKLLLQKG---YAVNT 38 (338)
T ss_dssp -CCEEEEECTTSHHHHHHHHHHHHTT---CEEEE
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCC---CEEEE
Confidence 346899999 9999999999998763 46665
No 365
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=49.26 E-value=17 Score=30.86 Aligned_cols=31 Identities=26% Similarity=0.653 Sum_probs=25.1
Q ss_pred eeeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 86 ~ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
..+|.|-| .|.||+.+++.|.++. .+|+++.
T Consensus 12 ~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~ 43 (292)
T 1vl0_A 12 HMKILITGANGQLGREIQKQLKGKN---VEVIPTD 43 (292)
T ss_dssp CEEEEEESTTSHHHHHHHHHHTTSS---EEEEEEC
T ss_pred cceEEEECCCChHHHHHHHHHHhCC---CeEEecc
Confidence 46899999 9999999999998752 5766664
No 366
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=49.26 E-value=18 Score=32.13 Aligned_cols=33 Identities=18% Similarity=0.217 Sum_probs=25.5
Q ss_pred ceeeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 85 ~~ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
|+.+|.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 27 M~k~vlVtGatG~IG~~l~~~L~~~g---~~V~~~~r 60 (381)
T 1n7h_A 27 PRKIALITGITGQDGSYLTEFLLGKG---YEVHGLIR 60 (381)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEEC
T ss_pred hCCeEEEEcCCchHHHHHHHHHHHCC---CEEEEEec
Confidence 335899999 8999999999998753 47766643
No 367
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=49.25 E-value=6 Score=35.92 Aligned_cols=92 Identities=15% Similarity=0.129 Sum_probs=49.4
Q ss_pred eeeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEec
Q 024349 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (269)
Q Consensus 86 ~ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~ 164 (269)
.-+|.|+| .|.||...++++.... ..+++++.. +.+.+..+.+ .|. +.- ++.+. .+.
T Consensus 172 g~~VlV~Ga~G~vG~~a~qlak~~~--g~~Vi~~~~--~~~~~~~~~~----lGa---d~v--------i~~~~-~~~-- 229 (363)
T 4dvj_A 172 APAILIVGGAGGVGSIAVQIARQRT--DLTVIATAS--RPETQEWVKS----LGA---HHV--------IDHSK-PLA-- 229 (363)
T ss_dssp EEEEEEESTTSHHHHHHHHHHHHHC--CSEEEEECS--SHHHHHHHHH----TTC---SEE--------ECTTS-CHH--
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhc--CCEEEEEeC--CHHHHHHHHH----cCC---CEE--------EeCCC-CHH--
Confidence 35799999 9999998888775421 247777753 2333333322 221 111 11100 000
Q ss_pred CCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCC
Q 024349 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGA 201 (269)
Q Consensus 165 ~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGa 201 (269)
....++ ...++|+||||+|.-...+.+-..++.|-
T Consensus 230 ~~v~~~--~~~g~Dvvid~~g~~~~~~~~~~~l~~~G 264 (363)
T 4dvj_A 230 AEVAAL--GLGAPAFVFSTTHTDKHAAEIADLIAPQG 264 (363)
T ss_dssp HHHHTT--CSCCEEEEEECSCHHHHHHHHHHHSCTTC
T ss_pred HHHHHh--cCCCceEEEECCCchhhHHHHHHHhcCCC
Confidence 001112 23489999999996534455556666655
No 368
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=49.17 E-value=16 Score=31.82 Aligned_cols=32 Identities=19% Similarity=0.332 Sum_probs=24.0
Q ss_pred ceeeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 85 ~~ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
.+++|.|-| .|.||+.+++.|.++. .+|+++.
T Consensus 18 ~~~~vlVtGatG~iG~~l~~~L~~~G---~~V~~~~ 50 (347)
T 4id9_A 18 GSHMILVTGSAGRVGRAVVAALRTQG---RTVRGFD 50 (347)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTT---CCEEEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCC---CEEEEEe
Confidence 346899999 8999999999998763 4666654
No 369
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=48.99 E-value=20 Score=30.99 Aligned_cols=32 Identities=22% Similarity=0.259 Sum_probs=25.0
Q ss_pred eeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 87 ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
++|.|-| .|.||+.+++.|.++. ..+|+++..
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~--g~~V~~~~r 33 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLRED--HYEVYGLDI 33 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHST--TCEEEEEES
T ss_pred CeEEEECCCcHHHHHHHHHHHHhC--CCEEEEEeC
Confidence 3789999 8999999999998762 257766643
No 370
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=48.70 E-value=12 Score=33.60 Aligned_cols=33 Identities=24% Similarity=0.327 Sum_probs=24.3
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~ 121 (269)
++||+|.|.|.+|..++..+.... .++ |.+-|.
T Consensus 2 ~~kI~VIGaG~vG~~~a~~la~~g--~~~-v~L~Di 34 (309)
T 1ur5_A 2 RKKISIIGAGFVGSTTAHWLAAKE--LGD-IVLLDI 34 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CSE-EEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC--CCe-EEEEeC
Confidence 469999999999999998887653 136 444444
No 371
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=48.69 E-value=5.3 Score=36.27 Aligned_cols=22 Identities=27% Similarity=0.315 Sum_probs=19.4
Q ss_pred eeEEEEcCChHHHHHHHHHHhC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGR 108 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r 108 (269)
.+|.|+|.|-+|..++..|...
T Consensus 37 ~~VlVvGaGGlGs~va~~La~a 58 (292)
T 3h8v_A 37 FAVAIVGVGGVGSVTAEMLTRC 58 (292)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH
T ss_pred CeEEEECcCHHHHHHHHHHHHc
Confidence 5899999999999999988753
No 372
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=48.58 E-value=18 Score=34.35 Aligned_cols=32 Identities=28% Similarity=0.374 Sum_probs=26.0
Q ss_pred eeeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 86 ~ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
++||.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G---~~V~~l~R 179 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGG---HEVIQLVR 179 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEEC
Confidence 46899999 9999999999998763 47666643
No 373
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=47.94 E-value=17 Score=34.83 Aligned_cols=33 Identities=15% Similarity=0.224 Sum_probs=25.8
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
+.+|.|.|.|.+||.+++.|.++. ..+|++++.
T Consensus 23 ~k~VlIiGAGgiG~aia~~L~~~~--g~~V~v~~R 55 (467)
T 2axq_A 23 GKNVLLLGSGFVAQPVIDTLAAND--DINVTVACR 55 (467)
T ss_dssp CEEEEEECCSTTHHHHHHHHHTST--TEEEEEEES
T ss_pred CCEEEEECChHHHHHHHHHHHhCC--CCeEEEEEC
Confidence 358999999999999999998652 357665553
No 374
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=47.17 E-value=15 Score=32.69 Aligned_cols=43 Identities=16% Similarity=0.256 Sum_probs=29.8
Q ss_pred eeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccc
Q 024349 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLL 131 (269)
Q Consensus 87 ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~Ll 131 (269)
|||.|-| .|.||+.+++.|.++. .++++.+.-..+.+.+..++
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g--~~~v~~~d~~~d~~~l~~~~ 44 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTT--DHHIFEVHRQTKEEELESAL 44 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHC--CCEEEECCTTCCHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC--CCEEEEECCCCCHHHHHHHh
Confidence 4799999 9999999999998763 24666654313555444444
No 375
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=47.09 E-value=19 Score=32.73 Aligned_cols=31 Identities=23% Similarity=0.344 Sum_probs=26.0
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
+.+|+|.|-|.+||.+++.+.+. .++++++.
T Consensus 12 ~~~IlIlG~G~lg~~la~aa~~l---G~~viv~d 42 (377)
T 3orq_A 12 GATIGIIGGGQLGKMMAQSAQKM---GYKVVVLD 42 (377)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT---TCEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHC---CCEEEEEE
Confidence 35899999999999999998765 37888874
No 376
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=46.88 E-value=19 Score=32.99 Aligned_cols=23 Identities=26% Similarity=0.306 Sum_probs=20.4
Q ss_pred eeeEEEEcCChHHHHHHHHHHhC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGR 108 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r 108 (269)
++||+|.|.|.+|..++..|.+.
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~ 51 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARK 51 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTT
T ss_pred CCeEEEECccHHHHHHHHHHHHC
Confidence 46899999999999999998764
No 377
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=46.69 E-value=12 Score=33.33 Aligned_cols=29 Identities=24% Similarity=0.343 Sum_probs=23.2
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
.+|.|.|+|++|+.+++.|.++ +. +++|.
T Consensus 116 ~~viI~G~G~~g~~l~~~L~~~---g~-v~vid 144 (336)
T 1lnq_A 116 RHVVICGWSESTLECLRELRGS---EV-FVLAE 144 (336)
T ss_dssp CEEEEESCCHHHHHHHTTGGGS---CE-EEEES
T ss_pred CCEEEECCcHHHHHHHHHHHhC---Cc-EEEEe
Confidence 4799999999999999988764 24 66663
No 378
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=46.68 E-value=43 Score=31.70 Aligned_cols=31 Identities=16% Similarity=0.021 Sum_probs=24.4
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
.+|.|+|.|++|...++.|.+.. -++++|..
T Consensus 13 ~~vlVvGgG~va~~k~~~L~~~g---a~V~vi~~ 43 (457)
T 1pjq_A 13 RDCLIVGGGDVAERKARLLLEAG---ARLTVNAL 43 (457)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---BEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhCc---CEEEEEcC
Confidence 57999999999999999998753 35555543
No 379
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=46.39 E-value=13 Score=33.28 Aligned_cols=23 Identities=13% Similarity=0.128 Sum_probs=19.9
Q ss_pred eeeEEEEcCChHHHHHHHHHHhC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGR 108 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r 108 (269)
..+|+|+|+|.+|+.+++.|...
T Consensus 135 ~~~igiIG~G~~g~~~a~~l~~~ 157 (312)
T 2i99_A 135 SEVLCILGAGVQAYSHYEIFTEQ 157 (312)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH
T ss_pred CcEEEEECCcHHHHHHHHHHHHh
Confidence 35899999999999999988753
No 380
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=46.23 E-value=18 Score=32.42 Aligned_cols=31 Identities=10% Similarity=0.075 Sum_probs=23.0
Q ss_pred eeEEEEcCChHHHHH-HHHH-HhCCCCCce-EEEEcC
Q 024349 87 LKVAINGFGRIGRNF-LRCW-HGRKDSPLD-VVVVND 120 (269)
Q Consensus 87 ikVaInGfGrIGR~l-lR~l-~~r~~~~l~-iVaInd 120 (269)
-+|.|+|.|.||... ++++ ..+ ..+ |+++..
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~---Ga~~Vi~~~~ 207 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDK---GYENLYCLGR 207 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTT---CCCEEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHHHc---CCcEEEEEeC
Confidence 479999999999988 8876 433 244 777754
No 381
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=46.02 E-value=73 Score=28.24 Aligned_cols=108 Identities=12% Similarity=0.089 Sum_probs=50.9
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCCCCccccccccc-ccccccccCceEEEecCCeEEECCEEEEEEecC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLK-YDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~Llk-yDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~~ 165 (269)
.+|.|.|.|.+||.+++.|.+.... +|..+|.. .+....|.+ +.. . .+...-...++-.|+||-.+.......
T Consensus 118 k~vlvlGaGg~g~aia~~L~~~G~~--~v~v~~R~--~~~a~~la~~~~~-~-~~~~~~~~~~~aDiVInaTp~Gm~~~~ 191 (277)
T 3don_A 118 AYILILGAGGASKGIANELYKIVRP--TLTVANRT--MSRFNNWSLNINK-I-NLSHAESHLDEFDIIINTTPAGMNGNT 191 (277)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTCCS--CCEEECSC--GGGGTTCCSCCEE-E-CHHHHHHTGGGCSEEEECCC-------
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCC--EEEEEeCC--HHHHHHHHHhccc-c-cHhhHHHHhcCCCEEEECccCCCCCCC
Confidence 4799999999999999999865311 44445543 222211211 000 0 000000000223467776555443211
Q ss_pred CCCCCCCCCCCc-cEEEEcC-CCCCChhhHHHHHHcCCC
Q 024349 166 DPLQLPWAELGI-DIVIEGT-GVFVDGPGAGKHIQAGAK 202 (269)
Q Consensus 166 ~P~~i~w~~~gv-DiVve~T-G~f~~~e~a~~Hl~aGak 202 (269)
+..+++....- -+|+|.. ....+ +.+....+.|++
T Consensus 192 -~~~l~~~~l~~~~~V~D~vY~P~~T-~ll~~A~~~G~~ 228 (277)
T 3don_A 192 -DSVISLNRLASHTLVSDIVYNPYKT-PILIEAEQRGNP 228 (277)
T ss_dssp -CCSSCCTTCCSSCEEEESCCSSSSC-HHHHHHHHTTCC
T ss_pred -cCCCCHHHcCCCCEEEEecCCCCCC-HHHHHHHHCcCE
Confidence 11133332222 3788874 44444 456666677883
No 382
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=45.81 E-value=23 Score=28.32 Aligned_cols=29 Identities=21% Similarity=0.430 Sum_probs=23.2
Q ss_pred eeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 87 ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
+||.|-| .|.||+.+++.|. +. .+++++.
T Consensus 4 M~vlVtGasg~iG~~~~~~l~-~g---~~V~~~~ 33 (202)
T 3d7l_A 4 MKILLIGASGTLGSAVKERLE-KK---AEVITAG 33 (202)
T ss_dssp CEEEEETTTSHHHHHHHHHHT-TT---SEEEEEE
T ss_pred cEEEEEcCCcHHHHHHHHHHH-CC---CeEEEEe
Confidence 4799999 9999999999987 52 4666553
No 383
>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*
Probab=45.80 E-value=26 Score=30.35 Aligned_cols=34 Identities=24% Similarity=0.458 Sum_probs=25.2
Q ss_pred eeEEEEc-CChHHHHHHHHHHhCCCCC---ceEEEEcC
Q 024349 87 LKVAING-FGRIGRNFLRCWHGRKDSP---LDVVVVND 120 (269)
Q Consensus 87 ikVaInG-fGrIGR~llR~l~~r~~~~---l~iVaInd 120 (269)
|||.|-| .|.||+.+++.|.++.... .+|+++..
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r 38 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDS 38 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEEC
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEEC
Confidence 3799999 9999999999998741113 57776643
No 384
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=45.23 E-value=42 Score=33.89 Aligned_cols=31 Identities=26% Similarity=0.213 Sum_probs=24.8
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
+.||+|+|.|.+|..++..+... .++|+.++
T Consensus 312 ~~kV~VIGaG~MG~~iA~~la~a---G~~V~l~D 342 (725)
T 2wtb_A 312 IKKVAIIGGGLMGSGIATALILS---NYPVILKE 342 (725)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTT---TCCEEEEC
T ss_pred CcEEEEEcCCHhhHHHHHHHHhC---CCEEEEEE
Confidence 45899999999999999988754 36766664
No 385
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=44.96 E-value=24 Score=31.86 Aligned_cols=30 Identities=7% Similarity=-0.086 Sum_probs=23.3
Q ss_pred eeEEEEcC-ChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 87 LKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 87 ikVaInGf-GrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
-+|.|+|- |.||...++++..+. .+++++.
T Consensus 166 ~~VlV~Ga~G~vG~~a~qla~~~G---a~Vi~~~ 196 (371)
T 3gqv_A 166 VYVLVYGGSTATATVTMQMLRLSG---YIPIATC 196 (371)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred cEEEEECCCcHHHHHHHHHHHHCC---CEEEEEe
Confidence 47999995 999999988876542 4777774
No 386
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=44.89 E-value=15 Score=33.20 Aligned_cols=30 Identities=20% Similarity=0.288 Sum_probs=22.8
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCc-eEEEEc
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVN 119 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l-~iVaIn 119 (269)
-+|.|+|.|.||...++++..+. . +|+++.
T Consensus 195 ~~VlV~GaG~vG~~a~q~a~~~G---a~~Vi~~~ 225 (378)
T 3uko_A 195 SNVAIFGLGTVGLAVAEGAKTAG---ASRIIGID 225 (378)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHT---CSCEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CCeEEEEc
Confidence 47999999999998888776432 3 677664
No 387
>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*
Probab=44.57 E-value=23 Score=31.43 Aligned_cols=32 Identities=19% Similarity=0.227 Sum_probs=25.1
Q ss_pred ceeeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 85 ~~ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
.+.+|.|-| .|.||+.+++.|.++. .+|+++.
T Consensus 10 ~~~~vlVTG~tGfIG~~l~~~L~~~G---~~V~~~~ 42 (404)
T 1i24_A 10 HGSRVMVIGGDGYCGWATALHLSKKN---YEVCIVD 42 (404)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred CCCeEEEeCCCcHHHHHHHHHHHhCC---CeEEEEE
Confidence 346899999 9999999999998763 4777664
No 388
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=44.51 E-value=25 Score=30.13 Aligned_cols=29 Identities=31% Similarity=0.540 Sum_probs=23.8
Q ss_pred eEEEEc-CChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 88 KVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 88 kVaInG-fGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
+|.|-| .|.||+.+++.|.++. .+|+++.
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~G---~~V~~~~ 31 (311)
T 2p5y_A 2 RVLVTGGAGFIGSHIVEDLLARG---LEVAVLD 31 (311)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTT---CEEEEEC
T ss_pred EEEEEeCCcHHHHHHHHHHHHCC---CEEEEEE
Confidence 789999 8999999999998753 4776664
No 389
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=44.37 E-value=14 Score=33.37 Aligned_cols=24 Identities=33% Similarity=0.367 Sum_probs=20.5
Q ss_pred ceeeEEEEc-CChHHHHHHHHHHhC
Q 024349 85 AKLKVAING-FGRIGRNFLRCWHGR 108 (269)
Q Consensus 85 ~~ikVaInG-fGrIGR~llR~l~~r 108 (269)
+++||+|.| .|.||..++..|.++
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~ 31 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMN 31 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhC
Confidence 457999999 899999999988765
No 390
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=44.25 E-value=23 Score=30.38 Aligned_cols=32 Identities=19% Similarity=0.230 Sum_probs=25.6
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
+.+|+|+|-|.+|-.++..|..+ .++++.+..
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~---G~~V~vlE~ 33 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAA---GHQVHLFDK 33 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT---TCCEEEECS
T ss_pred CceEEEECCcHHHHHHHHHHHHC---CCcEEEEEC
Confidence 35899999999999999988764 367777754
No 391
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=43.96 E-value=18 Score=33.85 Aligned_cols=30 Identities=20% Similarity=0.114 Sum_probs=22.9
Q ss_pred eeEEEEcC-ChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 87 LKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 87 ikVaInGf-GrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
-+|.|.|- |.||...++++... ..+++++.
T Consensus 230 ~~VlV~GasG~vG~~avqlak~~---Ga~vi~~~ 260 (456)
T 3krt_A 230 DNVLIWGASGGLGSYATQFALAG---GANPICVV 260 (456)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHT---TCEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHc---CCeEEEEE
Confidence 47999995 99999988887654 24766664
No 392
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=43.65 E-value=20 Score=32.15 Aligned_cols=22 Identities=27% Similarity=0.489 Sum_probs=19.2
Q ss_pred eeEEEEcCChHHHHHHHHHHhC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGR 108 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r 108 (269)
+||+|.|.|.+|..++..|...
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~ 22 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMK 22 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC
Confidence 4899999999999999887754
No 393
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=43.34 E-value=20 Score=30.45 Aligned_cols=29 Identities=14% Similarity=0.399 Sum_probs=23.4
Q ss_pred eeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 87 ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
+||.|-| .|.||+.+++.|. +. .+|+++.
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g---~~V~~~~ 30 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-PV---GNLIALD 30 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-TT---SEEEEEC
T ss_pred CeEEEECCCCHHHHHHHHHhh-cC---CeEEEec
Confidence 3799999 8999999999988 52 5776664
No 394
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=43.04 E-value=24 Score=31.39 Aligned_cols=32 Identities=25% Similarity=0.318 Sum_probs=25.4
Q ss_pred eeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 87 ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
++|.|-| .|.||+.+++.|.++. ..+|+++..
T Consensus 33 ~~ilVtGatG~iG~~l~~~L~~~g--~~~V~~~~r 65 (377)
T 2q1s_A 33 TNVMVVGGAGFVGSNLVKRLLELG--VNQVHVVDN 65 (377)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT--CSEEEEECC
T ss_pred CEEEEECCccHHHHHHHHHHHHcC--CceEEEEEC
Confidence 5899999 9999999999998752 147776643
No 395
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=43.04 E-value=27 Score=29.94 Aligned_cols=32 Identities=16% Similarity=0.348 Sum_probs=25.0
Q ss_pred eeeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 86 ~ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
..+|.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 12 ~~~vlVTGatG~iG~~l~~~L~~~G---~~V~~~~r 44 (321)
T 2pk3_A 12 SMRALITGVAGFVGKYLANHLTEQN---VEVFGTSR 44 (321)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred cceEEEECCCChHHHHHHHHHHHCC---CEEEEEec
Confidence 35799999 9999999999998763 47666643
No 396
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=43.01 E-value=23 Score=34.23 Aligned_cols=32 Identities=16% Similarity=0.199 Sum_probs=25.7
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCc-eEEEEc
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVN 119 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l-~iVaIn 119 (269)
.+||+|.|.|.+|..++..|.+.. .. +|++++
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~--G~~~V~~~D 50 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAP--CFEKVLGFQ 50 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHST--TCCEEEEEC
T ss_pred CCEEEEECcCHHHHHHHHHHHHhC--CCCeEEEEE
Confidence 368999999999999999988651 36 777664
No 397
>3au8_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH binding; HET: NDP; 1.86A {Plasmodium falciparum} PDB: 3au9_A* 3aua_A*
Probab=42.91 E-value=17 Score=35.48 Aligned_cols=44 Identities=25% Similarity=0.305 Sum_probs=31.6
Q ss_pred eeeEEEEc-CChHHHHHHHHHHhCC--CCCceEEEEcCCCCcccccc
Q 024349 86 KLKVAING-FGRIGRNFLRCWHGRK--DSPLDVVVVNDSGGVKNASH 129 (269)
Q Consensus 86 ~ikVaInG-fGrIGR~llR~l~~r~--~~~l~iVaInd~~~~~~~a~ 129 (269)
+.+|.|.| +|-||.+-|+++.+.+ -++++|+++.-...++.++.
T Consensus 77 mk~I~ILGSTGSIGtqTLdVi~~~p~~pd~f~V~aLaAg~Nv~lL~e 123 (488)
T 3au8_A 77 PINVAIFGSTGSIGTNALNIIRECNKIENVFNVKALYVNKSVNELYE 123 (488)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHHHHSCCEEEEEEEESSCHHHHHH
T ss_pred ceEEEEEccCcHHHHHHHHHHHcccCCCCeEEEEEEEcCCCHHHHHH
Confidence 46899999 9999999999887521 13589888865445554443
No 398
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=42.67 E-value=21 Score=30.69 Aligned_cols=30 Identities=20% Similarity=0.442 Sum_probs=23.0
Q ss_pred eeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 87 ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
++|.|-| .|.||+.+++.|.++. .+|++..
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g----~~v~~~~ 32 (313)
T 3ehe_A 2 SLIVVTGGAGFIGSHVVDKLSESN----EIVVIDN 32 (313)
T ss_dssp -CEEEETTTSHHHHHHHHHHTTTS----CEEEECC
T ss_pred CEEEEECCCchHHHHHHHHHHhCC----CEEEEEc
Confidence 4799999 9999999999998652 5555543
No 399
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=42.53 E-value=24 Score=31.45 Aligned_cols=24 Identities=33% Similarity=0.491 Sum_probs=20.6
Q ss_pred ceeeEEEEc-CChHHHHHHHHHHhC
Q 024349 85 AKLKVAING-FGRIGRNFLRCWHGR 108 (269)
Q Consensus 85 ~~ikVaInG-fGrIGR~llR~l~~r 108 (269)
+++||.|.| .|.||+.+++.|..+
T Consensus 3 ~~mkVlVtGaaGfIG~~l~~~L~~~ 27 (327)
T 1y7t_A 3 APVRVAVTGAAGQIGYSLLFRIAAG 27 (327)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhC
Confidence 346999999 699999999988864
No 400
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=42.41 E-value=20 Score=32.85 Aligned_cols=23 Identities=30% Similarity=0.333 Sum_probs=19.9
Q ss_pred eeeEEEEcCChHHHHHHHHHHhC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGR 108 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r 108 (269)
.-+|.|+|.|.+|..++..|...
T Consensus 118 ~~~VlvvG~GglGs~va~~La~a 140 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATS 140 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhC
Confidence 35899999999999999988753
No 401
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=42.22 E-value=28 Score=30.11 Aligned_cols=31 Identities=26% Similarity=0.335 Sum_probs=25.0
Q ss_pred eeeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 86 ~ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
+++|.|-| .|-||+.+++.|.++. .+|+++.
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~G---~~V~~~~ 36 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLAHG---YDVVIAD 36 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CcEEEEecCCcHHHHHHHHHHHHCC---CcEEEEe
Confidence 35899999 9999999999998763 4666664
No 402
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=42.01 E-value=62 Score=29.79 Aligned_cols=33 Identities=18% Similarity=0.109 Sum_probs=23.8
Q ss_pred eeEEEEc-CChHHHHHHHH--HHhCCCCCceEEEEcCC
Q 024349 87 LKVAING-FGRIGRNFLRC--WHGRKDSPLDVVVVNDS 121 (269)
Q Consensus 87 ikVaInG-fGrIGR~llR~--l~~r~~~~l~iVaInd~ 121 (269)
.||.|.| .|+.++.++.. +.+| .+.++|+.-++
T Consensus 11 tkviV~G~~Gk~~~~ml~~~~~~~r--~~~~vVagV~P 46 (334)
T 3mwd_B 11 TKAIVWGMQTRAVQGMLDFDYVCSR--DEPSVAAMVYP 46 (334)
T ss_dssp CCEEEESCCHHHHHHHHHHHHHTTC--SSCSEEEEECT
T ss_pred CeEEEECCchHHHHHHHHhcccccC--CCceEEEEEcC
Confidence 6899999 79988877776 3344 34678777665
No 403
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=41.89 E-value=27 Score=29.95 Aligned_cols=31 Identities=13% Similarity=0.079 Sum_probs=25.0
Q ss_pred eeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 87 ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
++|.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 12 ~~vlVTGatG~iG~~l~~~L~~~g---~~V~~~~r 43 (342)
T 1y1p_A 12 SLVLVTGANGFVASHVVEQLLEHG---YKVRGTAR 43 (342)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEECCccHHHHHHHHHHHHCC---CEEEEEeC
Confidence 5799999 8999999999998763 47666543
No 404
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=41.79 E-value=27 Score=30.58 Aligned_cols=31 Identities=16% Similarity=-0.005 Sum_probs=25.0
Q ss_pred eeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 87 ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
++|.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 10 ~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r 41 (357)
T 1rkx_A 10 KRVFVTGHTGFKGGWLSLWLQTMG---ATVKGYSL 41 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEECCCchHHHHHHHHHHhCC---CeEEEEeC
Confidence 5799999 9999999999998763 46666643
No 405
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=41.76 E-value=22 Score=32.69 Aligned_cols=34 Identities=26% Similarity=0.323 Sum_probs=25.8
Q ss_pred cceeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 84 VAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 84 ~~~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
+|+.+|.|+|-|..|-.++..|..+ .++++.|.+
T Consensus 20 ~m~~~ViIVGaGpaGl~~A~~La~~---G~~V~viE~ 53 (430)
T 3ihm_A 20 HMKKRIGIVGAGTAGLHLGLFLRQH---DVDVTVYTD 53 (430)
T ss_dssp ---CEEEEECCHHHHHHHHHHHHHT---TCEEEEEES
T ss_pred cCCCCEEEECCcHHHHHHHHHHHHC---CCeEEEEcC
Confidence 3667899999999999999888765 367777764
No 406
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=41.74 E-value=26 Score=34.22 Aligned_cols=31 Identities=16% Similarity=0.371 Sum_probs=24.1
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~ 121 (269)
.+|+|.|+|.||+.+++.|.... .+|+++ |.
T Consensus 266 KtVvVtGaGgIG~aiA~~Laa~G---A~Viv~-D~ 296 (488)
T 3ond_A 266 KVAVVAGYGDVGKGCAAALKQAG---ARVIVT-EI 296 (488)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEE-CS
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CEEEEE-cC
Confidence 57999999999999999987652 465544 44
No 407
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=41.70 E-value=22 Score=30.91 Aligned_cols=33 Identities=24% Similarity=0.457 Sum_probs=25.5
Q ss_pred eeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 87 ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
++|.|-| .|.||+.+++.|.++. ...+|+++..
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~~~~-~g~~V~~~~r 38 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVYNNH-PDVHVTVLDK 38 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHC-TTCEEEEEEC
T ss_pred cEEEEeCCccHHHHHHHHHHHHhC-CCCEEEEEeC
Confidence 5899999 9999999999998752 1357766643
No 408
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=41.63 E-value=25 Score=30.39 Aligned_cols=33 Identities=27% Similarity=0.613 Sum_probs=25.6
Q ss_pred eeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 87 ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
+||.|-| .|.||+.+++.|.++. ...+|+++..
T Consensus 4 m~vlVTGatG~iG~~l~~~L~~~g-~~~~V~~~~r 37 (336)
T 2hun_A 4 MKLLVTGGMGFIGSNFIRYILEKH-PDWEVINIDK 37 (336)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHC-TTCEEEEEEC
T ss_pred CeEEEECCCchHHHHHHHHHHHhC-CCCEEEEEec
Confidence 4799999 9999999999998752 2357776643
No 409
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=41.55 E-value=28 Score=30.49 Aligned_cols=30 Identities=17% Similarity=0.186 Sum_probs=24.4
Q ss_pred eeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 87 ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
++|.|-| .|.||+.+++.|.++. .+|+++.
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~ 32 (372)
T 1db3_A 2 KVALITGVTGQDGSYLAEFLLEKG---YEVHGIK 32 (372)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CEEEEECCCChHHHHHHHHHHHCC---CEEEEEE
Confidence 4799999 9999999999998763 4766664
No 410
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=41.48 E-value=34 Score=29.97 Aligned_cols=33 Identities=12% Similarity=0.157 Sum_probs=26.9
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
+..+|+|+|-|.+|-..+..|.++ .++|+.|..
T Consensus 16 ~~~dvvIIGgG~~Gl~~A~~La~~---G~~V~llE~ 48 (382)
T 1ryi_A 16 RHYEAVVIGGGIIGSAIAYYLAKE---NKNTALFES 48 (382)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHT---TCCEEEECS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhC---CCcEEEEeC
Confidence 557999999999999999988875 257777755
No 411
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=41.31 E-value=31 Score=28.25 Aligned_cols=29 Identities=21% Similarity=0.265 Sum_probs=23.5
Q ss_pred eEEEEc-CChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 88 KVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 88 kVaInG-fGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
+|.|-| .|-||+.+++.|.++. .+|+++.
T Consensus 3 ~vlVtGasg~iG~~l~~~L~~~g---~~V~~~~ 32 (255)
T 2dkn_A 3 VIAITGSASGIGAALKELLARAG---HTVIGID 32 (255)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred EEEEeCCCcHHHHHHHHHHHhCC---CEEEEEe
Confidence 689999 8999999999998763 4666654
No 412
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=41.19 E-value=29 Score=30.00 Aligned_cols=29 Identities=24% Similarity=0.376 Sum_probs=23.8
Q ss_pred eEEEEc-CChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 88 KVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 88 kVaInG-fGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
+|.|-| .|.||+.+++.|.++. .+|+++.
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~G---~~V~~~~ 31 (338)
T 1udb_A 2 RVLVTGGSGYIGSHTCVQLLQNG---HDVIILD 31 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred EEEEECCCCHHHHHHHHHHHHCC---CEEEEEe
Confidence 789999 9999999999998753 4776664
No 413
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=41.04 E-value=28 Score=30.65 Aligned_cols=22 Identities=32% Similarity=0.377 Sum_probs=18.3
Q ss_pred eeEEEEcCChHHHHHHHHHHhC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGR 108 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r 108 (269)
-+|.|.|.|.+|...+.++...
T Consensus 162 ~~VlV~GaG~vG~~aiq~ak~~ 183 (346)
T 4a2c_A 162 KNVIIIGAGTIGLLAIQCAVAL 183 (346)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT
T ss_pred CEEEEECCCCcchHHHHHHHHc
Confidence 4799999999999888877654
No 414
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=41.01 E-value=26 Score=31.42 Aligned_cols=31 Identities=26% Similarity=0.293 Sum_probs=24.4
Q ss_pred eeeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 86 ~ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
+++|.|-| .|.||+.+++.|.++. .+|+++.
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~ 36 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVG---HHVRAQV 36 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTT---CCEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCC---CEEEEEE
Confidence 35799999 9999999999998753 4665543
No 415
>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2
Probab=40.81 E-value=28 Score=29.49 Aligned_cols=31 Identities=26% Similarity=0.554 Sum_probs=23.9
Q ss_pred eEEEEc-CChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 88 KVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 88 kVaInG-fGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
||.|-| .|.||+.+++.|.++. ..+|+++..
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g--~~~V~~~~r 32 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKG--ITDILVVDN 32 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTT--CCCEEEEEC
T ss_pred CEEEEcCccHHHHHHHHHHHHCC--CcEEEEEcc
Confidence 478999 8999999999998752 146666654
No 416
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=40.44 E-value=27 Score=30.36 Aligned_cols=32 Identities=22% Similarity=0.686 Sum_probs=25.3
Q ss_pred eeeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 86 ~ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
.++|.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 20 ~~~vlVTGasG~iG~~l~~~L~~~g---~~V~~~~r 52 (330)
T 2pzm_A 20 HMRILITGGAGCLGSNLIEHWLPQG---HEILVIDN 52 (330)
T ss_dssp CCEEEEETTTSHHHHHHHHHHGGGT---CEEEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEEC
Confidence 35899999 8999999999998753 57666643
No 417
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=40.41 E-value=29 Score=30.58 Aligned_cols=34 Identities=24% Similarity=0.410 Sum_probs=25.7
Q ss_pred eeeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 86 ~ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
+++|.|-| .|-||+.+++.|.++. ...+|+++..
T Consensus 10 ~~~vlVTGatG~IG~~l~~~L~~~~-~g~~V~~~~r 44 (362)
T 3sxp_A 10 NQTILITGGAGFVGSNLAFHFQENH-PKAKVVVLDK 44 (362)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHC-TTSEEEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhC-CCCeEEEEEC
Confidence 35899999 9999999999998720 1257777653
No 418
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=40.26 E-value=28 Score=30.49 Aligned_cols=32 Identities=25% Similarity=0.514 Sum_probs=24.7
Q ss_pred eeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 87 ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
++|.|-| .|.||+.+++.|.++. ..+|+++..
T Consensus 47 ~~vlVtGatG~iG~~l~~~L~~~g--~~~V~~~~r 79 (357)
T 2x6t_A 47 RMIIVTGGAGFIGSNIVKALNDKG--ITDILVVDN 79 (357)
T ss_dssp -CEEEETTTSHHHHHHHHHHHHTT--CCCEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC--CcEEEEEec
Confidence 5799999 8999999999998763 146666654
No 419
>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*
Probab=40.15 E-value=25 Score=30.66 Aligned_cols=31 Identities=29% Similarity=0.394 Sum_probs=24.4
Q ss_pred eeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 87 ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
|||.|-| .|.||+.+++.|.++. ..+|+++.
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~~--g~~V~~~~ 32 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKNT--QDTVVNID 32 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHC--SCEEEEEE
T ss_pred CEEEEECCCchHhHHHHHHHHhcC--CCeEEEEe
Confidence 3799999 8999999999998742 25776664
No 420
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=39.74 E-value=32 Score=30.03 Aligned_cols=30 Identities=23% Similarity=0.395 Sum_probs=23.1
Q ss_pred eEEEEcC-ChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 88 KVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 88 kVaInGf-GrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
+|.|+|- |.||...++++..+. .+++++..
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~G---a~Vi~~~~ 179 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLG---YQVAAVSG 179 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTT---CCEEEEES
T ss_pred eEEEECCCcHHHHHHHHHHHHcC---CEEEEEeC
Confidence 4999994 999999988876542 47777753
No 421
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=39.72 E-value=32 Score=33.09 Aligned_cols=31 Identities=26% Similarity=0.382 Sum_probs=25.2
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
..||+|+|.|.+|..++..+... .++|+.++
T Consensus 54 i~kVaVIGaG~MG~~IA~~la~a---G~~V~l~D 84 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKAMAICFGLA---GIETFLVV 84 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT---TCEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHC---CCeEEEEE
Confidence 46899999999999999988864 36766664
No 422
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=39.66 E-value=32 Score=29.52 Aligned_cols=31 Identities=16% Similarity=0.219 Sum_probs=25.0
Q ss_pred eeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 87 ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
++|.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 4 ~~vlVtGatG~iG~~l~~~L~~~G---~~V~~~~r 35 (345)
T 2z1m_A 4 KRALITGIRGQDGAYLAKLLLEKG---YEVYGADR 35 (345)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CEEEEECCCChHHHHHHHHHHHCC---CEEEEEEC
Confidence 4799999 8999999999998763 57766643
No 423
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=39.40 E-value=28 Score=28.55 Aligned_cols=32 Identities=25% Similarity=0.233 Sum_probs=23.8
Q ss_pred eeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 87 ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
++|.|-| .|.||+.+++.|.++. ...+|+++.
T Consensus 19 ~~vlVtGasg~iG~~l~~~L~~~G-~~~~V~~~~ 51 (242)
T 2bka_A 19 KSVFILGASGETGRVLLKEILEQG-LFSKVTLIG 51 (242)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHHT-CCSEEEEEE
T ss_pred CeEEEECCCcHHHHHHHHHHHcCC-CCCEEEEEE
Confidence 4799999 9999999999998752 101665553
No 424
>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}
Probab=39.35 E-value=18 Score=33.86 Aligned_cols=36 Identities=19% Similarity=0.205 Sum_probs=26.9
Q ss_pred ceeeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 85 ~~ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
.+++|-|-| .|-||+.+++.|.++.....+|+++..
T Consensus 72 ~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R 108 (478)
T 4dqv_A 72 ELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVR 108 (478)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEEC
Confidence 346899999 999999999999876311247776654
No 425
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=39.29 E-value=33 Score=28.47 Aligned_cols=32 Identities=19% Similarity=0.132 Sum_probs=25.8
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~ 121 (269)
.+|.|+|.|--||.+++.|.+. .++++++=|.
T Consensus 13 k~v~IiGAGg~g~~v~~~l~~~---~~~~vgfiDd 44 (220)
T 4ea9_A 13 GGVVIIGGGGHAKVVIESLRAC---GETVAAIVDA 44 (220)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT---TCCEEEEECS
T ss_pred CCEEEEcCCHHHHHHHHHHHhC---CCEEEEEEeC
Confidence 4799999999999999998762 4777776553
No 426
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=39.16 E-value=1.1e+02 Score=29.15 Aligned_cols=85 Identities=13% Similarity=0.080 Sum_probs=52.1
Q ss_pred eeEEEEcCChHHHH-HHHHHHhCCCCCceEEEEcCCCC-cccccccccccccccccCceEEEecCCeEEECCEEEEEEec
Q 024349 87 LKVAINGFGRIGRN-FLRCWHGRKDSPLDVVVVNDSGG-VKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (269)
Q Consensus 87 ikVaInGfGrIGR~-llR~l~~r~~~~l~iVaInd~~~-~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~ 164 (269)
.+|-+.|.|-+|.. +++.|.++. .+|. +.|... ......| + + .| |+++..
T Consensus 20 ~~i~~iGiGg~Gms~lA~~l~~~G---~~V~-~sD~~~~~~~~~~L-~---------------~------~g--i~~~~G 71 (524)
T 3hn7_A 20 MHIHILGICGTFMGSLALLARALG---HTVT-GSDANIYPPMSTQL-E---------------Q------AG--VTIEEG 71 (524)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEE-EEESCCCTTHHHHH-H---------------H------TT--CEEEES
T ss_pred CEEEEEEecHhhHHHHHHHHHhCC---CEEE-EECCCCCcHHHHHH-H---------------H------CC--CEEECC
Confidence 58999999999996 678887653 4543 444411 1111111 1 1 01 233334
Q ss_pred CCCCCCCCCCCCccEEEEcCCCCCChhhHHHHHHcCCC
Q 024349 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAK 202 (269)
Q Consensus 165 ~~P~~i~w~~~gvDiVve~TG~f~~~e~a~~Hl~aGak 202 (269)
.+|+++. .++|+||=+.|.-.+........+.|.+
T Consensus 72 ~~~~~~~---~~~d~vV~Spgi~~~~p~l~~a~~~gi~ 106 (524)
T 3hn7_A 72 YLIAHLQ---PAPDLVVVGNAMKRGMDVIEYMLDTGLR 106 (524)
T ss_dssp CCGGGGC---SCCSEEEECTTCCTTSHHHHHHHHHTCC
T ss_pred CCHHHcC---CCCCEEEECCCcCCCCHHHHHHHHCCCc
Confidence 4565552 2589999999998887777777777774
No 427
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=39.08 E-value=37 Score=28.25 Aligned_cols=33 Identities=18% Similarity=0.167 Sum_probs=26.1
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
|+.+|+|+|-|..|-..+..|.++. ++++.|..
T Consensus 1 m~~~vvIIG~G~aGl~aA~~l~~~g---~~v~lie~ 33 (297)
T 3fbs_A 1 MKFDVIIIGGSYAGLSAALQLGRAR---KNILLVDA 33 (297)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTT---CCEEEEEC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCC---CCEEEEeC
Confidence 3478999999999999998887652 57776754
No 428
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=38.60 E-value=1.2e+02 Score=27.76 Aligned_cols=73 Identities=21% Similarity=0.228 Sum_probs=0.0
Q ss_pred eEEEEcCChHHHHHHHHHHhCCCCCce-EEEEcCCCCcccccccccccccccccCceEEEe--cCCeEEECCEEEEEEec
Q 024349 88 KVAINGFGRIGRNFLRCWHGRKDSPLD-VVVVNDSGGVKNASHLLKYDSLLGTFKADVKIV--DNETISVDGKLIKVVSN 164 (269)
Q Consensus 88 kVaInGfGrIGR~llR~l~~r~~~~l~-iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~--~~~~L~inGk~I~V~~~ 164 (269)
+|+|+|-|.+|-.++..|..... + +..+.....+ ++..-+. ....|... +++.+.+.+-...+
T Consensus 214 ~VvVvG~G~sg~e~A~~l~~~~~---~~V~l~~r~~~~------l~~~~i~--~~~~v~~~~~~~~~v~~~dG~~~~--- 279 (447)
T 2gv8_A 214 SVLVVGGASSANDLVRHLTPVAK---HPIYQSLLGGGD------IQNESLQ--QVPEITKFDPTTREIYLKGGKVLS--- 279 (447)
T ss_dssp CEEEECSSHHHHHHHHHHTTTSC---SSEEEECTTCCS------CBCSSEE--EECCEEEEETTTTEEEETTTEEEC---
T ss_pred EEEEEccCcCHHHHHHHHHHHhC---CcEEEEeCCCCc------CCCCCeE--EecCeEEEecCCCEEEECCCCEec---
Q ss_pred CCCCCCCCCCCCccEEEEcCC
Q 024349 165 RDPLQLPWAELGIDIVIEGTG 185 (269)
Q Consensus 165 ~~P~~i~w~~~gvDiVve~TG 185 (269)
.+|.||.|||
T Consensus 280 -----------~~D~vi~atG 289 (447)
T 2gv8_A 280 -----------NIDRVIYCTG 289 (447)
T ss_dssp -----------CCSEEEECCC
T ss_pred -----------cCCEEEECCC
No 429
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=38.47 E-value=21 Score=31.79 Aligned_cols=23 Identities=30% Similarity=0.382 Sum_probs=20.1
Q ss_pred eeeEEEEcCChHHHHHHHHHHhC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGR 108 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r 108 (269)
++||+|.|.|.+|..++..|...
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~ 26 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKD 26 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC
Confidence 36899999999999999988764
No 430
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=38.05 E-value=25 Score=29.52 Aligned_cols=31 Identities=19% Similarity=0.379 Sum_probs=23.4
Q ss_pred eEEEEc-CChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 88 KVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 88 kVaInG-fGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
+|.|-| .|.||+.+++.|.++. +..+|+++.
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~-~g~~V~~~~ 32 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTV-PASQIVAIV 32 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTS-CGGGEEEEE
T ss_pred CEEEEcCCchHHHHHHHHHHhhC-CCceEEEEE
Confidence 478999 8999999999998751 125666654
No 431
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=38.05 E-value=35 Score=30.32 Aligned_cols=22 Identities=27% Similarity=0.304 Sum_probs=19.3
Q ss_pred eeEEEEcCChHHHHHHHHHHhC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGR 108 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r 108 (269)
+||+|.|.|.+|..++..|..+
T Consensus 1 mkI~VIGaG~vG~~la~~la~~ 22 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLR 22 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHhC
Confidence 4899999999999999888764
No 432
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=37.78 E-value=34 Score=29.11 Aligned_cols=33 Identities=15% Similarity=0.130 Sum_probs=26.7
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
++.+|+|+|-|..|-..+..|.++ .++++.|..
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~~---g~~v~vie~ 53 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLARA---EIKPILYEG 53 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT---TCCCEEECC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC---CCCEEEEec
Confidence 568999999999999999888765 256666755
No 433
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=37.62 E-value=19 Score=30.29 Aligned_cols=31 Identities=13% Similarity=0.369 Sum_probs=23.7
Q ss_pred eEEEEc-CChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 88 KVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 88 kVaInG-fGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
+|.|-| .|.||+.+++.|.++. +..+|+++.
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~-~g~~V~~~~ 33 (287)
T 2jl1_A 2 SIAVTGATGQLGGLVIQHLLKKV-PASQIIAIV 33 (287)
T ss_dssp CEEETTTTSHHHHHHHHHHTTTS-CGGGEEEEE
T ss_pred eEEEEcCCchHHHHHHHHHHHhC-CCCeEEEEE
Confidence 689999 8999999999998751 125666654
No 434
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=37.59 E-value=27 Score=32.25 Aligned_cols=30 Identities=23% Similarity=0.073 Sum_probs=22.8
Q ss_pred eeEEEEcC-ChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 87 LKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 87 ikVaInGf-GrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
-+|.|.|- |.||...++++..+. .+++++.
T Consensus 222 ~~VlV~GasG~iG~~a~qla~~~G---a~vi~~~ 252 (447)
T 4a0s_A 222 DIVLIWGASGGLGSYAIQFVKNGG---GIPVAVV 252 (447)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHcC---CEEEEEe
Confidence 47999995 999999988877542 4666654
No 435
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=37.18 E-value=20 Score=35.45 Aligned_cols=22 Identities=14% Similarity=0.291 Sum_probs=19.6
Q ss_pred eeEEEEcCChHHHHHHHHHHhC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGR 108 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r 108 (269)
.||+|+|+|.+|+.+++.|...
T Consensus 55 KkIgIIGlGsMG~AmA~nLr~s 76 (525)
T 3fr7_A 55 KQIGVIGWGSQGPAQAQNLRDS 76 (525)
T ss_dssp SEEEEECCTTHHHHHHHHHHHH
T ss_pred CEEEEEeEhHHHHHHHHHHHhc
Confidence 4899999999999999988764
No 436
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=37.12 E-value=34 Score=30.77 Aligned_cols=23 Identities=35% Similarity=0.288 Sum_probs=19.9
Q ss_pred eeeEEEEcCChHHHHHHHHHHhC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGR 108 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r 108 (269)
++||+|.|.|.||..++-.|..+
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~ 29 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALR 29 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT
T ss_pred CCEEEEECCCHHHHHHHHHHHhC
Confidence 47999999999999988877765
No 437
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=36.33 E-value=22 Score=32.18 Aligned_cols=22 Identities=32% Similarity=0.471 Sum_probs=19.3
Q ss_pred eeEEEEc-CChHHHHHHHHHHhC
Q 024349 87 LKVAING-FGRIGRNFLRCWHGR 108 (269)
Q Consensus 87 ikVaInG-fGrIGR~llR~l~~r 108 (269)
+||+|.| .|.||..++..|..+
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~ 23 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQ 23 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhC
Confidence 4899999 999999999888764
No 438
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=36.33 E-value=37 Score=30.89 Aligned_cols=32 Identities=25% Similarity=0.192 Sum_probs=25.2
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
+.+|.|.|.|.+|+.+++.+.... .+|++++.
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~G---a~V~v~dr 198 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLG---AQVQIFDI 198 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC---CEEEEEeC
Confidence 368999999999999999987652 36666653
No 439
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=36.18 E-value=43 Score=29.32 Aligned_cols=33 Identities=15% Similarity=0.235 Sum_probs=26.6
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
|..+|.|+|-|.+|-..+..|.++. ++|+.|..
T Consensus 2 ~~~dvvIIGaG~~Gl~~A~~La~~G---~~V~vie~ 34 (389)
T 2gf3_A 2 THFDVIVVGAGSMGMAAGYQLAKQG---VKTLLVDA 34 (389)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTT---CCEEEECS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCC---CeEEEEeC
Confidence 4578999999999999999888752 57777754
No 440
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=36.03 E-value=39 Score=29.94 Aligned_cols=31 Identities=32% Similarity=0.607 Sum_probs=24.9
Q ss_pred eeEEEEc-CChHHHHHHHHHH-hCCCCCceEEEEcC
Q 024349 87 LKVAING-FGRIGRNFLRCWH-GRKDSPLDVVVVND 120 (269)
Q Consensus 87 ikVaInG-fGrIGR~llR~l~-~r~~~~l~iVaInd 120 (269)
++|.|-| .|.||+.+++.|. ++. .+|+++..
T Consensus 3 m~vlVTGatG~iG~~l~~~L~~~~g---~~V~~~~r 35 (397)
T 1gy8_A 3 MRVLVCGGAGYIGSHFVRALLRDTN---HSVVIVDS 35 (397)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCC---CEEEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHhCC---CEEEEEec
Confidence 3799999 9999999999998 753 47766643
No 441
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=36.03 E-value=32 Score=31.31 Aligned_cols=23 Identities=26% Similarity=0.329 Sum_probs=20.3
Q ss_pred eeeEEEEcCChHHHHHHHHHHhC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGR 108 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r 108 (269)
.+||+|.|.|.||..++..|..+
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~ 27 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQ 27 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC
Confidence 46899999999999999888765
No 442
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=35.91 E-value=41 Score=28.69 Aligned_cols=30 Identities=17% Similarity=0.230 Sum_probs=23.9
Q ss_pred eeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 87 ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
.+|.|-| .|.||+.+++.|.++. .+|+++.
T Consensus 2 k~vlVTGatG~iG~~l~~~L~~~G---~~V~~~~ 32 (322)
T 2p4h_X 2 GRVCVTGGTGFLGSWIIKSLLENG---YSVNTTI 32 (322)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CEEEEECChhHHHHHHHHHHHHCC---CEEEEEE
Confidence 3689999 9999999999998763 4766543
No 443
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=35.62 E-value=41 Score=29.86 Aligned_cols=31 Identities=13% Similarity=0.140 Sum_probs=24.8
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCc-eEEEEcC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVND 120 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l-~iVaInd 120 (269)
.+|.|.|.|.+||.+++.|.+.. . +|+.+|.
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~~G---~~~V~v~nR 173 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLSTA---AERIDMANR 173 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT---CSEEEEECS
T ss_pred CEEEEECcHHHHHHHHHHHHHCC---CCEEEEEeC
Confidence 47999999999999999998652 4 6666654
No 444
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Probab=35.27 E-value=27 Score=30.43 Aligned_cols=34 Identities=24% Similarity=0.205 Sum_probs=24.7
Q ss_pred eeEEEEc-CChHHHHHHHHHHhCCC--CCceEEEEcC
Q 024349 87 LKVAING-FGRIGRNFLRCWHGRKD--SPLDVVVVND 120 (269)
Q Consensus 87 ikVaInG-fGrIGR~llR~l~~r~~--~~l~iVaInd 120 (269)
++|.|-| .|.||+.+++.|.++.. ...+|+++..
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r 38 (364)
T 2v6g_A 2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVAR 38 (364)
T ss_dssp EEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEES
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeC
Confidence 4799999 99999999999886520 0046666643
No 445
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=35.08 E-value=33 Score=32.89 Aligned_cols=30 Identities=20% Similarity=0.290 Sum_probs=24.2
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
.||+|+|.|.+|..++..+... .++|+..+
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~a---G~~V~l~D 35 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASH---GHQVLLYD 35 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT---TCCEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHHC---CCeEEEEE
Confidence 4899999999999999988864 25766554
No 446
>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}
Probab=34.68 E-value=34 Score=28.41 Aligned_cols=28 Identities=25% Similarity=0.412 Sum_probs=22.3
Q ss_pred eEEEEc-CChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 88 KVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 88 kVaInG-fGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
+|.|-| .|.||+.+++.|.+ + .+|+++.
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~--g--~~V~~~~ 30 (273)
T 2ggs_A 2 RTLITGASGQLGIELSRLLSE--R--HEVIKVY 30 (273)
T ss_dssp CEEEETTTSHHHHHHHHHHTT--T--SCEEEEE
T ss_pred EEEEECCCChhHHHHHHHHhc--C--CeEEEec
Confidence 789999 99999999999874 2 4665554
No 447
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=34.68 E-value=37 Score=29.64 Aligned_cols=32 Identities=22% Similarity=0.254 Sum_probs=25.9
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
..+|+|+|-|.+|-.++..|.++. ++|+.|..
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G---~~V~vle~ 33 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAG---LNVLMTDA 33 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTT---CCEEEECS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCC---CeEEEEec
Confidence 468999999999999999888752 57777754
No 448
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=34.67 E-value=37 Score=32.11 Aligned_cols=30 Identities=23% Similarity=0.228 Sum_probs=23.5
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
.+|.|.|.|.||+.+++.|.++. .++++++
T Consensus 4 k~VlViGaG~iG~~ia~~L~~~G---~~V~v~~ 33 (450)
T 1ff9_A 4 KSVLMLGSGFVTRPTLDVLTDSG---IKVTVAC 33 (450)
T ss_dssp CEEEEECCSTTHHHHHHHHHTTT---CEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCc---CEEEEEE
Confidence 47999999999999999998642 5655544
No 449
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=34.60 E-value=1.4e+02 Score=27.68 Aligned_cols=75 Identities=13% Similarity=0.084 Sum_probs=0.0
Q ss_pred eEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCCCCcccccccccccccccccCceEEEecCCeEEECCEEEEEEecCCC
Q 024349 88 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDP 167 (269)
Q Consensus 88 kVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~~~~~~~a~LlkyDS~hG~f~g~v~~~~~~~L~inGk~I~V~~~~~P 167 (269)
+|+|+|-|.+|-.++..|... +.++-++.-++. ++.+. |+..|.+ ...--.+.+..+.+ .|-
T Consensus 199 ~VvVVG~G~sg~eiA~~l~~~-g~~V~li~~~~~--------~~~~~-----~~~~V~~-~~~V~~i~~~~V~~---~dG 260 (464)
T 2xve_A 199 TVLLVGSSYSAEDIGSQCYKY-GAKKLISCYRTA--------PMGYK-----WPENWDE-RPNLVRVDTENAYF---ADG 260 (464)
T ss_dssp EEEEECCSTTHHHHHHHHHHT-TCSEEEEECSSC--------CCCCC-----CCTTEEE-CSCEEEECSSEEEE---TTS
T ss_pred EEEEEcCCCCHHHHHHHHHHh-CCeEEEEEECCC--------CCCCC-----CCCceEE-cCCeEEEeCCEEEE---CCC
Q ss_pred CCCCCCCCCccEEEEcCC
Q 024349 168 LQLPWAELGIDIVIEGTG 185 (269)
Q Consensus 168 ~~i~w~~~gvDiVve~TG 185 (269)
..+ .+|.||.|||
T Consensus 261 ~~i-----~~D~Vi~atG 273 (464)
T 2xve_A 261 SSE-----KVDAIILCTG 273 (464)
T ss_dssp CEE-----ECSEEEECCC
T ss_pred CEE-----eCCEEEECCC
No 450
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=34.51 E-value=24 Score=35.57 Aligned_cols=31 Identities=13% Similarity=0.166 Sum_probs=24.7
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
..||+|+|.|.+|..++..+... .++|+.++
T Consensus 314 i~kV~VIGaG~MG~~iA~~la~a---G~~V~l~D 344 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSASK---GTPILMKD 344 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHHHT---TCCEEEEC
T ss_pred CCEEEEECCChhhHHHHHHHHhC---CCEEEEEE
Confidence 45899999999999999988764 35766554
No 451
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=34.32 E-value=28 Score=31.21 Aligned_cols=24 Identities=17% Similarity=0.369 Sum_probs=20.2
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhC
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGR 108 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r 108 (269)
+++||+|.|.|.||..++..+..+
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~ 28 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQ 28 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhC
Confidence 346999999999999998877654
No 452
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=34.25 E-value=51 Score=28.66 Aligned_cols=34 Identities=24% Similarity=0.274 Sum_probs=25.6
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
.+|+|+|-|..|-.++..|.+.....++++.+..
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek 35 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDK 35 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEEC
Confidence 5899999999999999988761112468777754
No 453
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=33.62 E-value=42 Score=31.95 Aligned_cols=32 Identities=25% Similarity=0.422 Sum_probs=26.3
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
.++|++.|.|.+|..++.+|.+. ..++++++-
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~---G~~V~~~D~ 39 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDF---GHEVVCVDK 39 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT---TCEEEEECS
T ss_pred ceEEEEEcCCHHHHHHHHHHHHC---CCEEEEEeC
Confidence 47999999999999999998875 257777753
No 454
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=33.58 E-value=48 Score=29.56 Aligned_cols=33 Identities=21% Similarity=0.355 Sum_probs=26.4
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
+++||.|.|-|.+|+.+++.+.+. .++++++..
T Consensus 10 ~~~~ili~g~g~~~~~~~~a~~~~---G~~v~~~~~ 42 (391)
T 1kjq_A 10 AATRVMLLGSGELGKEVAIECQRL---GVEVIAVDR 42 (391)
T ss_dssp TCCEEEEESCSHHHHHHHHHHHTT---TCEEEEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc---CCEEEEEEC
Confidence 446899999999999999998764 367777754
No 455
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=33.49 E-value=51 Score=29.85 Aligned_cols=23 Identities=22% Similarity=0.320 Sum_probs=20.1
Q ss_pred eeeEEEEcCChHHHHHHHHHHhC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGR 108 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r 108 (269)
++||+|.|.|.+|..++..|..+
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~ 27 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIK 27 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT
T ss_pred CCEEEEECCCHHHHHHHHHHHhC
Confidence 36899999999999999888765
No 456
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=33.27 E-value=36 Score=30.55 Aligned_cols=33 Identities=15% Similarity=0.015 Sum_probs=24.2
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~ 121 (269)
.+|+|.|.|.+|+..++.|.+.. +++-|.|-+.
T Consensus 126 ~~v~iIGaG~~a~~~~~al~~~~--~~~~V~v~~r 158 (322)
T 1omo_A 126 SVFGFIGCGTQAYFQLEALRRVF--DIGEVKAYDV 158 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHS--CCCEEEEECS
T ss_pred CEEEEEcCcHHHHHHHHHHHHhC--CccEEEEECC
Confidence 58999999999999999887621 2444445444
No 457
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=33.20 E-value=51 Score=29.27 Aligned_cols=31 Identities=16% Similarity=0.339 Sum_probs=23.1
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEE
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVV 118 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaI 118 (269)
+||+|.|.|.+|..++..|..+. ...+++.+
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~-~g~~V~l~ 31 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQ-LARELVLL 31 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CCSEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CCCEEEEE
Confidence 48999999999999998887642 12455555
No 458
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=32.95 E-value=48 Score=29.63 Aligned_cols=33 Identities=18% Similarity=0.160 Sum_probs=26.0
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
.+.+|+|+|-|..|-.++..|..+ .++++.+..
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~---G~~V~v~E~ 54 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQS---GIDCDVYEA 54 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT---TCEEEEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC---CCCEEEEeC
Confidence 457999999999999999988765 367776754
No 459
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=32.90 E-value=37 Score=29.41 Aligned_cols=29 Identities=24% Similarity=0.236 Sum_probs=23.6
Q ss_pred eeEEEEc-CChHHHHHHHHHHhCCCCCceEEEE
Q 024349 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVV 118 (269)
Q Consensus 87 ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaI 118 (269)
.+|.|-| .|.||+.+++.|.++. .+|+++
T Consensus 6 ~~vlVTGatGfIG~~l~~~L~~~G---~~V~~~ 35 (337)
T 2c29_D 6 ETVCVTGASGFIGSWLVMRLLERG---YTVRAT 35 (337)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT---CEEEEE
T ss_pred CEEEEECCchHHHHHHHHHHHHCC---CEEEEE
Confidence 5799999 9999999999998763 466653
No 460
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=32.55 E-value=37 Score=32.53 Aligned_cols=30 Identities=17% Similarity=0.101 Sum_probs=24.5
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEE
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVV 118 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaI 118 (269)
+.+|+|+|.|.+|-.++-++.++ ..+|+++
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~---G~~V~g~ 50 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALL---GHRVVGY 50 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH---TCEEEEE
T ss_pred CCEEEEEccCHHHHHHHHHHHhC---CCcEEEE
Confidence 35899999999999888877764 3688887
No 461
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=32.42 E-value=41 Score=27.43 Aligned_cols=30 Identities=23% Similarity=0.341 Sum_probs=23.5
Q ss_pred eeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 87 ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
.+|.|-| .|-||+.+++.|.++. .+++++.
T Consensus 3 k~vlVtGasggiG~~la~~l~~~G---~~V~~~~ 33 (242)
T 1uay_A 3 RSALVTGGASGLGRAAALALKARG---YRVVVLD 33 (242)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHT---CEEEEEE
T ss_pred CEEEEeCCCChHHHHHHHHHHHCC---CEEEEEc
Confidence 4688999 9999999999998753 4665553
No 462
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=32.42 E-value=29 Score=31.11 Aligned_cols=23 Identities=22% Similarity=0.328 Sum_probs=19.7
Q ss_pred eeeEEEEcCChHHHHHHHHHHhC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGR 108 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r 108 (269)
++||+|.|.|.||..++..|..+
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~ 28 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQ 28 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC
Confidence 46999999999999988877654
No 463
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=32.10 E-value=45 Score=30.40 Aligned_cols=31 Identities=26% Similarity=0.328 Sum_probs=23.5
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~ 121 (269)
.||+|+|.|.+|+-++..+... .++|+.. |+
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~---G~~V~l~-D~ 37 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASG---GFRVKLY-DI 37 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCCEEEE-CS
T ss_pred CeEEEECCcHHHHHHHHHHHhC---CCeEEEE-EC
Confidence 5899999999999999877653 3675443 44
No 464
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=31.96 E-value=29 Score=31.42 Aligned_cols=22 Identities=27% Similarity=0.591 Sum_probs=19.3
Q ss_pred eeEEEEcCChHHHHHHHHHHhC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGR 108 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r 108 (269)
|||+|.|.|.+|..++..+..+
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~ 22 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQ 22 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC
Confidence 4899999999999999887764
No 465
>2jv8_A Uncharacterized protein NE1242; solution structure, NESG, structural genomics, unknown function, PSI-2; NMR {Nitrosomonas europaea atcc 19718}
Probab=31.94 E-value=25 Score=25.03 Aligned_cols=22 Identities=27% Similarity=0.566 Sum_probs=17.6
Q ss_pred ceEEEecCCeEEECCEEEEEEe
Q 024349 142 ADVKIVDNETISVDGKLIKVVS 163 (269)
Q Consensus 142 g~v~~~~~~~L~inGk~I~V~~ 163 (269)
|++.++++..|.+|||+|....
T Consensus 11 gtidieddtsltingkeisyvh 32 (73)
T 2jv8_A 11 GTIDIEDDTSLTINGKEISYVH 32 (73)
T ss_dssp EEEEEETTEEEEETTEECCCCC
T ss_pred CeeeeccCceeEECCEEeehHH
Confidence 6777767788999999987653
No 466
>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}
Probab=31.76 E-value=38 Score=26.92 Aligned_cols=27 Identities=33% Similarity=0.681 Sum_probs=21.6
Q ss_pred eEEEEc-CChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 88 KVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 88 kVaInG-fGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
+|.|-| .|.||+.+++.|.++ +++++.
T Consensus 2 ~vlVtGasg~iG~~la~~l~~~-----~V~~~~ 29 (207)
T 2yut_A 2 RVLITGATGGLGGAFARALKGH-----DLLLSG 29 (207)
T ss_dssp EEEEETTTSHHHHHHHHHTTTS-----EEEEEC
T ss_pred EEEEEcCCcHHHHHHHHHHHhC-----CEEEEE
Confidence 578999 999999999988754 665553
No 467
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=31.30 E-value=33 Score=30.99 Aligned_cols=24 Identities=25% Similarity=0.383 Sum_probs=20.6
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhC
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGR 108 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r 108 (269)
+++||+|.|.|.+|..++..+...
T Consensus 13 ~~~kI~ViGaG~vG~~iA~~la~~ 36 (328)
T 2hjr_A 13 MRKKISIIGAGQIGSTIALLLGQK 36 (328)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC
Confidence 446999999999999999888765
No 468
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=31.09 E-value=33 Score=31.04 Aligned_cols=23 Identities=35% Similarity=0.299 Sum_probs=20.2
Q ss_pred eeeEEEEcCChHHHHHHHHHHhC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGR 108 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r 108 (269)
++||+|.|.|.+|..++..|...
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~ 31 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALR 31 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC
Confidence 46999999999999999888764
No 469
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=30.95 E-value=64 Score=25.12 Aligned_cols=31 Identities=23% Similarity=0.221 Sum_probs=24.3
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
.+|+|+|-|.+|-.++..|.++. .++..|..
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g---~~v~lie~ 32 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAG---LKVLVLDG 32 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT---CCEEEEEC
T ss_pred CeEEEECCCHHHHHHHHHHHHCC---CcEEEEeC
Confidence 58999999999999998887652 46665653
No 470
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=30.91 E-value=58 Score=28.50 Aligned_cols=32 Identities=19% Similarity=0.220 Sum_probs=26.2
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
..+|+|+|-|-+|-.++..|.++ .++|+.|..
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~---G~~V~vle~ 37 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARK---GYSVHILAR 37 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHT---TCEEEEEES
T ss_pred CCCEEEECCCHHHHHHHHHHHhC---CCEEEEEec
Confidence 36899999999999999988765 368777764
No 471
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=30.62 E-value=33 Score=31.11 Aligned_cols=30 Identities=7% Similarity=0.115 Sum_probs=22.4
Q ss_pred eeEEEE--cCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 87 LKVAIN--GFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 87 ikVaIn--GfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
-+|.|+ |.|.||...++++..+. .+++++.
T Consensus 172 ~~vlV~gag~G~vG~~a~q~a~~~G---a~Vi~~~ 203 (379)
T 3iup_A 172 HSALVHTAAASNLGQMLNQICLKDG---IKLVNIV 203 (379)
T ss_dssp CSCEEESSTTSHHHHHHHHHHHHHT---CCEEEEE
T ss_pred CEEEEECCCCCHHHHHHHHHHHHCC---CEEEEEE
Confidence 368898 79999998888776542 4777764
No 472
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=30.57 E-value=56 Score=29.86 Aligned_cols=33 Identities=21% Similarity=0.322 Sum_probs=26.6
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
+++||.|.|-|.+|+.+++.+.++ .++++++..
T Consensus 18 ~~~~ili~g~g~~g~~~~~a~~~~---G~~v~~v~~ 50 (433)
T 2dwc_A 18 SAQKILLLGSGELGKEIAIEAQRL---GVEVVAVDR 50 (433)
T ss_dssp TCCEEEEESCSHHHHHHHHHHHHT---TCEEEEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC---CCEEEEEEC
Confidence 346899999999999999998864 367777754
No 473
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=30.49 E-value=34 Score=30.44 Aligned_cols=22 Identities=27% Similarity=0.217 Sum_probs=19.4
Q ss_pred eeEEEEc-CChHHHHHHHHHHhC
Q 024349 87 LKVAING-FGRIGRNFLRCWHGR 108 (269)
Q Consensus 87 ikVaInG-fGrIGR~llR~l~~r 108 (269)
+||+|.| .|.||..++..|..+
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~ 23 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALR 23 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT
T ss_pred CEEEEECCCChHHHHHHHHHHhC
Confidence 4899999 999999999888764
No 474
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=30.17 E-value=43 Score=30.77 Aligned_cols=31 Identities=26% Similarity=0.395 Sum_probs=26.2
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
+.||+|.|-|..||.+++.+.+. .++++++.
T Consensus 24 ~~~I~ilGgG~lg~~l~~aa~~l---G~~v~~~d 54 (403)
T 3k5i_A 24 SRKVGVLGGGQLGRMLVESANRL---NIQVNVLD 54 (403)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH---TCEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHC---CCEEEEEE
Confidence 46899999999999999998764 37888886
No 475
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=29.97 E-value=34 Score=29.49 Aligned_cols=22 Identities=23% Similarity=0.314 Sum_probs=19.7
Q ss_pred eeEEEEcCChHHHHHHHHHHhC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGR 108 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r 108 (269)
.+|.|.|.|.+|..+++.|...
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~ 53 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASA 53 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH
T ss_pred CeEEEEeeCHHHHHHHHHHHHc
Confidence 5899999999999999988754
No 476
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=29.37 E-value=71 Score=26.79 Aligned_cols=33 Identities=21% Similarity=0.245 Sum_probs=26.4
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
|+.+|.|+|-|..|-..+..|.++. ++++.|..
T Consensus 14 ~~~~vvIIG~G~aGl~aA~~l~~~g---~~v~lie~ 46 (323)
T 3f8d_A 14 EKFDVIIVGLGPAAYGAALYSARYM---LKTLVIGE 46 (323)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTT---CCEEEEES
T ss_pred CccCEEEECccHHHHHHHHHHHHCC---CcEEEEec
Confidence 4579999999999999998887652 57776765
No 477
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=28.99 E-value=54 Score=28.26 Aligned_cols=31 Identities=10% Similarity=0.153 Sum_probs=24.6
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
|++||+|.|-| .|+.+++.+.++ .++++++.
T Consensus 1 m~m~Ililg~g-~~~~l~~a~~~~---G~~v~~~~ 31 (334)
T 2r85_A 1 MKVRIATYASH-SALQILKGAKDE---GFETIAFG 31 (334)
T ss_dssp CCSEEEEESST-THHHHHHHHHHT---TCCEEEES
T ss_pred CceEEEEECCh-hHHHHHHHHHhC---CCEEEEEE
Confidence 34689999998 999999998765 36777664
No 478
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=28.79 E-value=61 Score=29.42 Aligned_cols=23 Identities=26% Similarity=0.297 Sum_probs=20.1
Q ss_pred eeeEEEEcCChHHHHHHHHHHhC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGR 108 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r 108 (269)
++||+|.|.|.+|..++..|...
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~ 29 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLK 29 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT
T ss_pred CCEEEEECCCHHHHHHHHHHHhC
Confidence 36999999999999999888765
No 479
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=28.68 E-value=49 Score=29.97 Aligned_cols=31 Identities=13% Similarity=0.218 Sum_probs=23.9
Q ss_pred eeeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 86 ~ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
+.+|.|-| .|-||+.+++.|.++ ..+|+++.
T Consensus 69 ~~~vlVTGatG~iG~~l~~~L~~~---g~~V~~~~ 100 (427)
T 4f6c_A 69 LGNTLLTGATGFLGAYLIEALQGY---SHRIYCFI 100 (427)
T ss_dssp CEEEEEECTTSHHHHHHHHHHTTT---EEEEEEEE
T ss_pred CCEEEEecCCcHHHHHHHHHHHcC---CCEEEEEE
Confidence 46899999 999999999999543 24665554
No 480
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=28.64 E-value=35 Score=30.67 Aligned_cols=24 Identities=25% Similarity=0.360 Sum_probs=20.3
Q ss_pred ceeeEEEEcC-ChHHHHHHHHHHhC
Q 024349 85 AKLKVAINGF-GRIGRNFLRCWHGR 108 (269)
Q Consensus 85 ~~ikVaInGf-GrIGR~llR~l~~r 108 (269)
+++||+|.|- |.||..++..|..+
T Consensus 4 ~~~KI~ViGaaG~VG~~l~~~L~~~ 28 (329)
T 1b8p_A 4 TPMRVAVTGAAGQICYSLLFRIANG 28 (329)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCChHHHHHHHHHHhC
Confidence 3579999995 99999999888764
No 481
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=28.45 E-value=61 Score=28.96 Aligned_cols=31 Identities=23% Similarity=0.275 Sum_probs=25.3
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
.||+|.|-|..||.+++++.+. .++++++..
T Consensus 2 ~~Ililg~g~~g~~~~~a~~~~---G~~v~~~~~ 32 (380)
T 3ax6_A 2 KKIGIIGGGQLGKMMTLEAKKM---GFYVIVLDP 32 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHC---CCEEEEEeC
Confidence 4799999999999999998764 367777754
No 482
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=28.44 E-value=2.3e+02 Score=23.91 Aligned_cols=81 Identities=15% Similarity=0.145 Sum_probs=0.0
Q ss_pred eEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCC----CCcccccccccccccccccCceEEEecCC----eEEE----C
Q 024349 88 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS----GGVKNASHLLKYDSLLGTFKADVKIVDNE----TISV----D 155 (269)
Q Consensus 88 kVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~----~~~~~~a~LlkyDS~hG~f~g~v~~~~~~----~L~i----n 155 (269)
+|+|+|-|.+|-.++..|..+.. ++..+... .+.+....|++..-+.=.++..+...+++ .+.+ +
T Consensus 154 ~v~VvG~G~~g~e~A~~l~~~g~---~Vtlv~~~~~~~~~~~~~~~l~~~~gv~i~~~~~v~~i~~~~~v~~v~~~~~~~ 230 (325)
T 2q7v_A 154 KVVVIGGGDAAVEEGMFLTKFAD---EVTVIHRRDTLRANKVAQARAFANPKMKFIWDTAVEEIQGADSVSGVKLRNLKT 230 (325)
T ss_dssp EEEEECCSHHHHHHHHHHTTTCS---EEEEECSSSSCCSCHHHHHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTT
T ss_pred EEEEECCCHHHHHHHHHHHhcCC---EEEEEeCCCcCCcchHHHHHHHhcCCceEecCCceEEEccCCcEEEEEEEECCC
Q ss_pred CEEEEEEecCCCCCCCCCCCCccEEEEcCC
Q 024349 156 GKLIKVVSNRDPLQLPWAELGIDIVIEGTG 185 (269)
Q Consensus 156 Gk~I~V~~~~~P~~i~w~~~gvDiVve~TG 185 (269)
|+...+ .+|.||-++|
T Consensus 231 g~~~~i--------------~~D~vi~a~G 246 (325)
T 2q7v_A 231 GEVSEL--------------ATDGVFIFIG 246 (325)
T ss_dssp CCEEEE--------------ECSEEEECSC
T ss_pred CcEEEE--------------EcCEEEEccC
No 483
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=28.25 E-value=70 Score=27.40 Aligned_cols=31 Identities=19% Similarity=0.328 Sum_probs=25.5
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
.+|.|+|-|.+|-..+..|.++ .++|+.|..
T Consensus 5 ~dvvIIG~G~~Gl~~A~~La~~---G~~V~vlE~ 35 (369)
T 3dme_A 5 IDCIVIGAGVVGLAIARALAAG---GHEVLVAEA 35 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT---TCCEEEECS
T ss_pred CCEEEECCCHHHHHHHHHHHhC---CCeEEEEeC
Confidence 6899999999999999888775 257777754
No 484
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=27.98 E-value=72 Score=26.15 Aligned_cols=30 Identities=13% Similarity=0.113 Sum_probs=23.4
Q ss_pred eeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 87 ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
.+|.|-| .|-||+.+++.|.++. .+++.+.
T Consensus 3 k~vlItGasggiG~~~a~~l~~~G---~~V~~~~ 33 (250)
T 2cfc_A 3 RVAIVTGASSGNGLAIATRFLARG---DRVAALD 33 (250)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC---CEEEEEe
Confidence 3678889 9999999999998763 4665553
No 485
>3h2z_A Mannitol-1-phosphate 5-dehydrogenase; PSI- protein structure initiative, structural genomics, midwest for structural genomics (MCSG); 1.90A {Shigella flexneri 2a str}
Probab=27.98 E-value=42 Score=31.46 Aligned_cols=30 Identities=23% Similarity=0.377 Sum_probs=22.4
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEE
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVV 118 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaI 118 (269)
||+...|.|.|||-+.-.++.+. +.+++.+
T Consensus 1 mkavhfGaGniGRGfig~~l~~~--g~~v~f~ 30 (382)
T 3h2z_A 1 MKALHFGAGNIGRGFIGKLLADA--GIQLTFA 30 (382)
T ss_dssp CEEEEECCSHHHHHTHHHHHHHT--TCEEEEE
T ss_pred CcEEEECCCccchhhHHHHHHHc--CCeEEEE
Confidence 47999999999998886666543 3666554
No 486
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=27.96 E-value=72 Score=27.52 Aligned_cols=32 Identities=19% Similarity=0.183 Sum_probs=25.4
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
..+|+|+|-|..|-.++..|..+ .++++.+..
T Consensus 4 ~yDViIVGaGpaGl~~A~~La~~---G~~V~v~Er 35 (397)
T 3oz2_A 4 TYDVLVVGGGPGGSTAARYAAKY---GLKTLMIEK 35 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT---TCCEEEECS
T ss_pred CCCEEEECcCHHHHHHHHHHHHC---CCcEEEEeC
Confidence 36899999999999999888764 367777754
No 487
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=27.95 E-value=71 Score=28.96 Aligned_cols=36 Identities=19% Similarity=0.144 Sum_probs=26.9
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCC
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~ 121 (269)
|+.+|+|+|-|..|-..++.|.++. .+.+|+.|.+.
T Consensus 1 M~~~vvIIGaG~AGl~aA~~L~~~g-~~~~V~li~~~ 36 (410)
T 3ef6_A 1 MATHVAIIGNGVGGFTTAQALRAEG-FEGRISLIGDE 36 (410)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTT-CCSEEEEEECS
T ss_pred CCCCEEEEcccHHHHHHHHHHHccC-cCCeEEEEECC
Confidence 3458999999999999998887653 34567777664
No 488
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=27.74 E-value=59 Score=26.54 Aligned_cols=31 Identities=29% Similarity=0.299 Sum_probs=24.1
Q ss_pred eeeEEEEc-CChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 86 ~ikVaInG-fGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
..+|.|-| .|.||+.+++.|.++. .+++.+.
T Consensus 5 ~k~vlVtGasggiG~~~a~~l~~~G---~~V~~~~ 36 (234)
T 2ehd_A 5 KGAVLITGASRGIGEATARLLHAKG---YRVGLMA 36 (234)
T ss_dssp CCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEE
Confidence 34688999 9999999999998763 4666553
No 489
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=27.60 E-value=60 Score=30.10 Aligned_cols=30 Identities=23% Similarity=0.306 Sum_probs=25.2
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
.||+|.|-|.+||.+++.+.+. .++++++.
T Consensus 36 ~~IlIlG~G~lg~~~~~aa~~l---G~~v~v~d 65 (419)
T 4e4t_A 36 AWLGMVGGGQLGRMFCFAAQSM---GYRVAVLD 65 (419)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHC---CCEEEEEC
Confidence 5899999999999999988764 37877774
No 490
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=27.28 E-value=70 Score=27.62 Aligned_cols=31 Identities=23% Similarity=0.284 Sum_probs=24.9
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
.+|.|.|.|-+||.+++.|.+.. .+|+.++.
T Consensus 120 k~vlViGaGg~g~a~a~~L~~~G---~~V~v~~R 150 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLSLD---CAVTITNR 150 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CEEEEECCcHHHHHHHHHHHHcC---CEEEEEEC
Confidence 47999999999999999998753 46666654
No 491
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=27.03 E-value=43 Score=30.14 Aligned_cols=23 Identities=22% Similarity=0.359 Sum_probs=19.4
Q ss_pred eeeEEEEcCChHHHHHHHHHHhC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGR 108 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r 108 (269)
++||+|.|.|.||..++-.|...
T Consensus 5 ~~KI~IiGaG~vG~~~a~~l~~~ 27 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSSYAFAMAQQ 27 (318)
T ss_dssp BCEEEEECCSHHHHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHcC
Confidence 47999999999999888777654
No 492
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=26.83 E-value=51 Score=29.17 Aligned_cols=32 Identities=31% Similarity=0.353 Sum_probs=25.0
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
..+|.|+|-|..|-.++..|..+ .++++.+..
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~---G~~v~v~E~ 33 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKA---GIDNVILER 33 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHH---TCCEEEECS
T ss_pred CccEEEECCCHHHHHHHHHHHHC---CCCEEEEeC
Confidence 35899999999999998888654 267766754
No 493
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=26.82 E-value=39 Score=30.25 Aligned_cols=22 Identities=32% Similarity=0.385 Sum_probs=19.3
Q ss_pred eeEEEEcC-ChHHHHHHHHHHhC
Q 024349 87 LKVAINGF-GRIGRNFLRCWHGR 108 (269)
Q Consensus 87 ikVaInGf-GrIGR~llR~l~~r 108 (269)
+||+|.|. |.||..++..|..+
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~ 23 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNS 23 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTC
T ss_pred CEEEEECCCChHHHHHHHHHHhC
Confidence 48999996 99999999988865
No 494
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=26.81 E-value=60 Score=28.26 Aligned_cols=30 Identities=27% Similarity=0.338 Sum_probs=24.2
Q ss_pred eEEEEcCChHHHHHHHHHHhCCCCCc-eEEEEcC
Q 024349 88 KVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVND 120 (269)
Q Consensus 88 kVaInGfGrIGR~llR~l~~r~~~~l-~iVaInd 120 (269)
+|+|.|.|..||.+++.|.+.. . +|..+|.
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G---~~~I~v~nR 140 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMG---VKDIWVVNR 140 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTT---CCCEEEEES
T ss_pred eEEEECcHHHHHHHHHHHHHcC---CCEEEEEeC
Confidence 7999999999999999998753 3 5555654
No 495
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=26.76 E-value=70 Score=28.85 Aligned_cols=22 Identities=23% Similarity=0.178 Sum_probs=19.6
Q ss_pred eeEEEEcCChHHHHHHHHHHhC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGR 108 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r 108 (269)
.||+|.|.|.+|..++..+..+
T Consensus 9 ~kv~ViGaG~vG~~ia~~l~~~ 30 (315)
T 3tl2_A 9 KKVSVIGAGFTGATTAFLLAQK 30 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHhC
Confidence 5899999999999999888764
No 496
>2z04_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; purine nucleotide biosynthetic pathway, structural genomics, NPPSFA; 2.35A {Aquifex aeolicus}
Probab=26.73 E-value=61 Score=28.70 Aligned_cols=31 Identities=26% Similarity=0.245 Sum_probs=25.4
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
.||+|.|-|..|+.+++.+.+. .++++++..
T Consensus 2 ~~Ililg~g~~~~~~~~a~~~~---G~~v~~~~~ 32 (365)
T 2z04_A 2 LTVGILGGGQLGWMTILEGRKL---GFKFHVLED 32 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHGGG---TCEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHC---CCEEEEEeC
Confidence 4899999999999999998764 368777753
No 497
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=26.69 E-value=52 Score=29.37 Aligned_cols=30 Identities=17% Similarity=0.192 Sum_probs=23.6
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEc
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaIn 119 (269)
.+|.|+|.|++|...++.|.+.. -+|++|.
T Consensus 14 k~VLVVGgG~va~rka~~Ll~~G---a~VtVia 43 (274)
T 1kyq_A 14 KRILLIGGGEVGLTRLYKLMPTG---CKLTLVS 43 (274)
T ss_dssp CEEEEEEESHHHHHHHHHHGGGT---CEEEEEE
T ss_pred CEEEEECCcHHHHHHHHHHHhCC---CEEEEEc
Confidence 57999999999999999998753 3555554
No 498
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=26.47 E-value=78 Score=28.24 Aligned_cols=32 Identities=19% Similarity=0.094 Sum_probs=25.6
Q ss_pred eeeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcC
Q 024349 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (269)
Q Consensus 86 ~ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd 120 (269)
+.+|+|+|-|..|-.++..|..+ .++++.+..
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~---G~~v~v~E~ 36 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDA---GVDVDVYER 36 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT---TCEEEEECS
T ss_pred CCcEEEECCCHHHHHHHHHHHhC---CCCEEEEec
Confidence 46899999999999999888764 367777754
No 499
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=26.43 E-value=45 Score=30.18 Aligned_cols=24 Identities=21% Similarity=0.283 Sum_probs=19.9
Q ss_pred ceeeEEEEcCChHHHHHHHHHHhC
Q 024349 85 AKLKVAINGFGRIGRNFLRCWHGR 108 (269)
Q Consensus 85 ~~ikVaInGfGrIGR~llR~l~~r 108 (269)
+++||+|.|.|.||..++-.|..+
T Consensus 8 ~~~KI~IiGaG~vG~~la~~l~~~ 31 (326)
T 2zqz_A 8 DHQKVILVGDGAVGSSYAYAMVLQ 31 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHcC
Confidence 447999999999999888777654
No 500
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=26.16 E-value=45 Score=30.06 Aligned_cols=32 Identities=28% Similarity=0.269 Sum_probs=23.9
Q ss_pred eeEEEEcCChHHHHHHHHHHhCCCCCceEEEEcCC
Q 024349 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (269)
Q Consensus 87 ikVaInGfGrIGR~llR~l~~r~~~~l~iVaInd~ 121 (269)
+||+|.|.|.+|..++..|..+. -++ |.+-|.
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g--~~~-v~L~Di 36 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKN--LGD-VVLFDI 36 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--CCE-EEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCC--CCe-EEEEeC
Confidence 58999999999999998887653 126 444454
Done!