BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024353
(268 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9T0K7|HIBC6_ARATH 3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial
OS=Arabidopsis thaliana GN=At4g13360 PE=1 SV=2
Length = 421
Score = 416 bits (1069), Expect = e-115, Method: Compositional matrix adjust.
Identities = 197/268 (73%), Positives = 230/268 (85%)
Query: 1 MDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLG 60
MDG+TMGFG+G+SGHGRYR++TE+T+LAMPENGIGLFPDVGFSYIAA PGGGSVGAYLG
Sbjct: 154 MDGITMGFGLGLSGHGRYRVITERTVLAMPENGIGLFPDVGFSYIAAHSPGGGSVGAYLG 213
Query: 61 MTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEG 120
+TGKRIS PSDALF GLGT YVPS L SLKEA+L+ SEDP+QDI A L+KYSS+PE
Sbjct: 214 LTGKRISAPSDALFVGLGTHYVPSEKLASLKEAILSANLSEDPNQDIQATLSKYSSNPES 273
Query: 121 EAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCL 180
EA LK LLP I S FSS KS+++ IEELKK+Q S E+SV +WA+EAL+G+ KGAPFSL L
Sbjct: 274 EAHLKSLLPHIESAFSSNKSIKETIEELKKYQQSTESSVVEWANEALKGLEKGAPFSLYL 333
Query: 181 TQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWN 240
TQKYFS VA A K +NEL+ L+GVMK EYR+ALRS+LR DFAEGVRAVL+DKDQNPKWN
Sbjct: 334 TQKYFSNVACAKSKPENELATLNGVMKTEYRIALRSALRGDFAEGVRAVLIDKDQNPKWN 393
Query: 241 PASLEEVNQSEVEALFEPLGTGVEELKV 268
P S+EEV+++EVEALF+PL VEELKV
Sbjct: 394 PTSIEEVDENEVEALFKPLSPEVEELKV 421
>sp|Q9LK08|HIBC7_ARATH 3-hydroxyisobutyryl-CoA hydrolase-like protein 4, mitochondrial
OS=Arabidopsis thaliana GN=At3g24360 PE=2 SV=1
Length = 418
Score = 404 bits (1038), Expect = e-112, Method: Compositional matrix adjust.
Identities = 192/268 (71%), Positives = 226/268 (84%)
Query: 1 MDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLG 60
MDG+TMGFG+G+SGHGRYR++TE+T+LAMPENGIGLFPDVGFSYIAA PG GSVGAYLG
Sbjct: 151 MDGITMGFGLGLSGHGRYRVITERTVLAMPENGIGLFPDVGFSYIAAHSPGEGSVGAYLG 210
Query: 61 MTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEG 120
MTG+RISTPSDALF GLGT YVPSG LGSL+EA+L+ S+DP Q I A L+ YSSDPE
Sbjct: 211 MTGRRISTPSDALFVGLGTHYVPSGKLGSLREAILSADLSKDPQQHIQATLSNYSSDPET 270
Query: 121 EAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCL 180
E+ L++LLPQI S FS KSV++ IEELKK Q S+E SVA+WA+EA+QG+ KGAPFSL L
Sbjct: 271 ESHLQMLLPQIESAFSVSKSVKETIEELKKFQQSSEASVAEWANEAVQGIEKGAPFSLYL 330
Query: 181 TQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWN 240
T KYFSKVA A GKT+N ++ L+GVM EYR+ALRS+LRSDF EGVRAVL DKDQNPKW
Sbjct: 331 THKYFSKVACAKGKTNNAMATLNGVMITEYRIALRSALRSDFTEGVRAVLTDKDQNPKWK 390
Query: 241 PASLEEVNQSEVEALFEPLGTGVEELKV 268
PASL+EV+++EV+ALF PL EEL V
Sbjct: 391 PASLDEVDETEVDALFMPLSPEFEELNV 418
>sp|Q5ZJ60|HIBCH_CHICK 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Gallus gallus
GN=HIBCH PE=2 SV=1
Length = 385
Score = 160 bits (405), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 103/266 (38%), Positives = 148/266 (55%), Gaps = 26/266 (9%)
Query: 1 MDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLG 60
+DG+TMG G+G+S HG +R+ TEKT+ AMPE IGLFPDVG Y + G +G L
Sbjct: 138 IDGITMGGGVGLSVHGHFRVATEKTVFAMPETAIGLFPDVGGGYFLPR--LSGKIGHLLA 195
Query: 61 MTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSS---- 116
+TG R+ D L AG+ T +V SG L L++ L+A+ ++I LL Y
Sbjct: 196 LTGFRLKG-RDVLKAGIATHFVESGKLPELEKDLIAL--KSPSKENIADLLNSYHMQTKI 252
Query: 117 DPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPF 176
D E E L + +I S FS+ S+ +I+++LK+ S +A + L+ + K +P
Sbjct: 253 DQEKEFVLDEHMERINSIFSAN-SMEEIVQKLKQDGSP-------FATKQLEAINKMSPT 304
Query: 177 SLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQN 236
SL LT + + A+ L V EYR++ DF EGVRAVL+DKDQ+
Sbjct: 305 SLKLTLRQLREGATM---------SLQDVFTMEYRLSQACMRGHDFYEGVRAVLIDKDQS 355
Query: 237 PKWNPASLEEVNQSEVEALFEPLGTG 262
P+W PA+LEEV+ V+ F+PLG
Sbjct: 356 PRWKPAALEEVSDEFVDNCFKPLGNN 381
>sp|Q8QZS1|HIBCH_MOUSE 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Mus musculus
GN=Hibch PE=1 SV=1
Length = 385
Score = 155 bits (393), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/265 (37%), Positives = 148/265 (55%), Gaps = 26/265 (9%)
Query: 1 MDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLG 60
+DG+TMG G+G+S HG++R+ TE++L AMPE GIGLFPDVG Y + G +G +L
Sbjct: 138 IDGITMGGGVGLSVHGQFRVATERSLFAMPETGIGLFPDVGGGYFLPRLQ--GKLGYFLA 195
Query: 61 MTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSS---- 116
+TG R+ D AG+ T +V S L L+E LLA+ +D+ +L Y +
Sbjct: 196 LTGYRLKG-RDVHRAGIATHFVDSEKLRVLEEELLAL--KSPSAEDVAGVLESYHAKSKM 252
Query: 117 DPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPF 176
D + + + +I SCFS+ +V QIIE L++ S +A E ++ + K +P
Sbjct: 253 DQDKSIIFEEHMDKINSCFSA-NTVEQIIENLRQDGSP-------FAIEQMKVINKMSPT 304
Query: 177 SLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQN 236
SL +T ++ KT L V+ EYR+ DF EGVRAVL+DKDQ
Sbjct: 305 SLKIT---LRQLMEGSSKT------LQEVLIMEYRITQACMEGHDFHEGVRAVLIDKDQT 355
Query: 237 PKWNPASLEEVNQSEVEALFEPLGT 261
PKW PA+L++V ++ + F+ LG+
Sbjct: 356 PKWKPANLKDVTDEDLNSYFKSLGS 380
>sp|Q6NVY1|HIBCH_HUMAN 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Homo sapiens
GN=HIBCH PE=1 SV=2
Length = 386
Score = 155 bits (392), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 101/265 (38%), Positives = 149/265 (56%), Gaps = 26/265 (9%)
Query: 1 MDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLG 60
+ G+TMG G+G+S HG++R+ TEK L AMPE IGLFPDVG Y + G +G +L
Sbjct: 139 IHGITMGGGVGLSVHGQFRVATEKCLFAMPETAIGLFPDVGGGYFLPRLQ--GKLGYFLA 196
Query: 61 MTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSS---- 116
+TG R+ D AG+ T +V S L L+E LLA+ ++I ++L Y +
Sbjct: 197 LTGFRLKG-RDVYRAGIATHFVDSEKLAMLEEDLLAL--KSPSKENIASVLENYHTESKI 253
Query: 117 DPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPF 176
D + L+ + +I SCFS+ +V +IIE L++ SS +A E L+ + K +P
Sbjct: 254 DRDKSFILEEHMDKINSCFSA-NTVEEIIENLQQDGSS-------FALEQLKVINKMSPT 305
Query: 177 SLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQN 236
SL +T ++ KT L V+ EYR++ DF EGVRAVL+DKDQ+
Sbjct: 306 SLKIT---LRQLMEGSSKT------LQEVLTMEYRLSQACMRGHDFHEGVRAVLIDKDQS 356
Query: 237 PKWNPASLEEVNQSEVEALFEPLGT 261
PKW PA L+EV + ++ F+ LG+
Sbjct: 357 PKWKPADLKEVTEEDLNNHFKSLGS 381
>sp|Q9LKJ1|HIBC1_ARATH 3-hydroxyisobutyryl-CoA hydrolase 1 OS=Arabidopsis thaliana GN=CHY1
PE=1 SV=1
Length = 378
Score = 152 bits (385), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/261 (37%), Positives = 138/261 (52%), Gaps = 22/261 (8%)
Query: 1 MDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLG 60
++G+ MG G G+S HGR+RI TE T+ AMPE +GLFPDVG SY ++ P G G Y+G
Sbjct: 112 LNGIVMGGGAGVSVHGRFRIATENTVFAMPETALGLFPDVGASYFLSRLP--GFFGEYVG 169
Query: 61 MTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPE- 119
+TG R+ ++ L GL T +VPS L +L EA L S DP +L Y+ P
Sbjct: 170 LTGARLDG-AEMLACGLATHFVPSTRLTAL-EADLCRINSNDP-TFASTILDAYTQHPRL 226
Query: 120 GEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLC 179
+ L I CF S ++V +II L++ A W +Q + KG+P SL
Sbjct: 227 KQQSAYRRLDVIDRCF-SRRTVEEIISALERE---ATQEADGWISATIQALKKGSPASLK 282
Query: 180 LTQKYFSKVASAHGKTDNELSKLSGVMKYEYRV---ALRSSLRSDFAEGVRAVLVDKDQN 236
++ + + L + + EYR+ ++ + DF EG RA+LVDKD+N
Sbjct: 283 ISLRSIR---------EGRLQGVGQCLIREYRMVCHVMKGEISKDFVEGCRAILVDKDKN 333
Query: 237 PKWNPASLEEVNQSEVEALFE 257
PKW P LE++ S VE FE
Sbjct: 334 PKWEPRRLEDMKDSMVEQYFE 354
>sp|Q5XIE6|HIBCH_RAT 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Rattus
norvegicus GN=Hibch PE=1 SV=2
Length = 385
Score = 151 bits (381), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 97/265 (36%), Positives = 147/265 (55%), Gaps = 26/265 (9%)
Query: 1 MDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLG 60
+DG+TMG G+G+S HG++R+ TE++L AMPE GIGLFPDVG Y + G +G +L
Sbjct: 138 IDGITMGGGVGLSVHGQFRVATERSLFAMPETGIGLFPDVGGGYFLPRLQ--GKLGYFLA 195
Query: 61 MTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEG 120
+TG R+ D AG+ T +V S L L+E LLA+ +D+ +L Y + +
Sbjct: 196 LTGFRLKG-RDVHRAGIATHFVDSEKLHVLEEELLAL--KSPSAEDVAGVLESYHAKSKM 252
Query: 121 EAPLKLL----LPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPF 176
++ + +I SCFS+ +V QI+E L++ S +A E ++ + K +P
Sbjct: 253 GQDKSIIFEEHMDKINSCFSA-NTVEQILENLRQDGSP-------FAMEQIKVINKMSPT 304
Query: 177 SLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQN 236
SL +T ++ KT L V+ EYR+ DF EGVRAVL+DKDQ
Sbjct: 305 SLKIT---LRQLMEGSTKT------LQEVLTMEYRLTQACMEGHDFHEGVRAVLIDKDQT 355
Query: 237 PKWNPASLEEVNQSEVEALFEPLGT 261
PKW PA L++V ++ + F+ LG+
Sbjct: 356 PKWKPADLKDVTDEDLNSYFKSLGS 380
>sp|A2VDC2|HIBCH_XENLA 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Xenopus laevis
GN=hibch PE=2 SV=1
Length = 385
Score = 148 bits (373), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 104/266 (39%), Positives = 147/266 (55%), Gaps = 28/266 (10%)
Query: 1 MDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLG 60
+DG+TMG G+G+S HG +R+ +EKTL AMPE IGLFPDVG Y + G +G YL
Sbjct: 138 IDGITMGGGVGLSVHGHFRVASEKTLFAMPETAIGLFPDVGGGYFLPRLT--GKLGLYLA 195
Query: 61 MTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVA-LLAKYS--SD 117
+TG R+ SD AG+ T +V S L SL++ L+A+ + P ++ VA +L Y S
Sbjct: 196 LTGFRLK-GSDVQKAGIATHFVESEKLSSLEQDLVAM---KSPSKENVADVLDSYQKKSY 251
Query: 118 PEGEAPLKLL--LPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAP 175
+ P L + +I S FS +V +I+E LK SS +A + LQ + +P
Sbjct: 252 AAQDKPFVLAENMDKINSLFSGN-TVEEIMENLKCDGSS-------FAMKQLQTLSTMSP 303
Query: 176 FSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQ 235
SL +T + + AS L V+ EYR++ DF EGVRAVL+DKDQ
Sbjct: 304 TSLKITFRQLKEGASM---------SLQEVLTMEYRLSQACMNGHDFYEGVRAVLIDKDQ 354
Query: 236 NPKWNPASLEEVNQSEVEALFEPLGT 261
KW P SLEEV + +++ F LG+
Sbjct: 355 KAKWKPESLEEVTEDYIDSCFTSLGS 380
>sp|Q28FR6|HIBCH_XENTR 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Xenopus
tropicalis GN=hibch PE=2 SV=1
Length = 385
Score = 145 bits (367), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/266 (38%), Positives = 146/266 (54%), Gaps = 28/266 (10%)
Query: 1 MDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLG 60
+DG+TMG G+G+S HG +R+ +E TL AMPE IGLFPDVG Y + P G +G YL
Sbjct: 138 IDGITMGGGVGLSVHGHFRVASENTLFAMPETAIGLFPDVGGGYFLPRLP--GKLGLYLA 195
Query: 61 MTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVA-LLAKYSSDPE 119
+TG R+ SD AG+ T +V S + SL++ L+A+ + P ++ VA +L Y +
Sbjct: 196 LTGFRLKG-SDVQKAGIATHFVESEKIPSLEQDLVAM---KCPSKENVADVLDSYHNKSY 251
Query: 120 G--EAPLKLL--LPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAP 175
+ P L L +I S FS+ SV IIE L+ SS +A + LQ + +P
Sbjct: 252 AAQDKPFVLAEHLDKINSLFSAS-SVEAIIENLRCDGSS-------FALKQLQTLSTMSP 303
Query: 176 FSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQ 235
SL +T + + +S L V+ EYR++ DF EGVRAVL+DK+Q
Sbjct: 304 TSLKITFRQLKEGSSM---------SLQEVLTMEYRLSQACMKGYDFYEGVRAVLIDKNQ 354
Query: 236 NPKWNPASLEEVNQSEVEALFEPLGT 261
N KWNP LEEV +++ F LG
Sbjct: 355 NAKWNPELLEEVTDDYIDSYFTSLGN 380
>sp|Q6NMB0|HIBC3_ARATH Probable 3-hydroxyisobutyryl-CoA hydrolase 3 OS=Arabidopsis
thaliana GN=At2g30660 PE=2 SV=1
Length = 378
Score = 145 bits (365), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 90/260 (34%), Positives = 138/260 (53%), Gaps = 22/260 (8%)
Query: 1 MDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLG 60
++G+ MG G G+S HGR+RI TE T+ AMPE +GLFPDVG SY ++ P G G Y+G
Sbjct: 108 LNGIVMGAGAGVSIHGRFRIATENTVFAMPETSLGLFPDVGASYFLSRLP--GFFGEYVG 165
Query: 61 MTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPE- 119
+TG R+ ++ L GL T +VPS L +L+ L V S DP + +L Y+ P
Sbjct: 166 LTGARLDG-AELLACGLATHFVPSTRLTALETDLCKVG-SSDP-SFVSTILDAYTQHPHL 222
Query: 120 GEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLC 179
+ L I CF S++++ +II L++ + + W+ ++ + K +P SL
Sbjct: 223 KQKSAYHRLDVIDRCF-SKRTMEEIISALERETTQ---ELDDWSLTTIRALKKSSPSSLK 278
Query: 180 LTQKYFSKVASAHGKTDNELSKLSGVMKYEYRV---ALRSSLRSDFAEGVRAVLVDKDQN 236
+ S + L + + EYR+ ++ L D EG RA+L+DKD+N
Sbjct: 279 I---------SLRSIREGRLQGVGHCLTREYRMVCHVMKGDLSKDLVEGCRAILIDKDRN 329
Query: 237 PKWNPASLEEVNQSEVEALF 256
PKW P LE++ S V+ F
Sbjct: 330 PKWEPRRLEDMKDSMVDQFF 349
>sp|Q1PEY5|HIBC2_ARATH Probable 3-hydroxyisobutyryl-CoA hydrolase 2 OS=Arabidopsis
thaliana GN=At2g30650 PE=2 SV=1
Length = 378
Score = 142 bits (357), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/273 (34%), Positives = 141/273 (51%), Gaps = 24/273 (8%)
Query: 1 MDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLG 60
++G+ MG G G+S +GR+RI TE T+ AMPE +GLFPDVG SY ++ P G G Y+G
Sbjct: 108 LNGIVMGGGAGLSTNGRFRIATENTVFAMPETALGLFPDVGASYFLSRLP--GFFGEYVG 165
Query: 61 MTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPE- 119
+TG R+ ++ L GL T +VPS +L +L+ L V S I +L Y+ P
Sbjct: 166 LTGARLDG-AEMLACGLATHFVPSISLTALEAELYKVGSSNQTF--ISTILDAYAEYPHL 222
Query: 120 GEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLC 179
+ L I CF S+++V +I L++ + W +Q + K +P L
Sbjct: 223 NQHSSYHRLDVIDRCF-SKRTVEEIFSALEREVTQKPND---WLLATIQALEKASPSCLK 278
Query: 180 LTQKYFSKVASAHGKTDNELSKLSGVMKYEYRV---ALRSSLRSDFAEGVRAVLVDKDQN 236
+ S + L + + EYR+ ++ + DF EG RAVL+DKD+N
Sbjct: 279 I---------SLRSIREGRLQGVGQCLIREYRMVCHVMKGDISKDFVEGCRAVLIDKDRN 329
Query: 237 PKWNPASLEEVNQSEVEALFEPLGT--GVEELK 267
PKW P LE+V S V+ FE + G E+LK
Sbjct: 330 PKWQPRRLEDVTDSMVDQYFERVEDEEGWEDLK 362
>sp|Q55GS6|HIBCH_DICDI 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Dictyostelium
discoideum GN=hibch PE=3 SV=1
Length = 381
Score = 139 bits (351), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/265 (33%), Positives = 146/265 (55%), Gaps = 23/265 (8%)
Query: 2 DGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGM 61
+G MG GIG+S HG++R+ TE T+ AMPE GIG F DVG SY + P + G YL +
Sbjct: 135 NGFAMGGGIGLSVHGKFRVATENTVFAMPETGIGFFCDVGGSYFLPRLPN--NYGMYLAL 192
Query: 62 TGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDP-HQDIVALLAKYSSDPEG 120
TG ++ ++ AG+ T +V + ++ +L++ + E+P Q I ++L KY +
Sbjct: 193 TGSKLKG-NNVYLAGVATHFVSNEHIQALEKE---IEECENPTSQTINSILTKYHDKSKS 248
Query: 121 EA-PLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLC 179
+ L I F + SV++I E+L+ ++S +WA + L+ + +P SL
Sbjct: 249 TSNEYNDNLGDIERIFG-KNSVKEIFEQLELLENS------EWAKQTLKTLKSVSPSSLM 301
Query: 180 LTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKW 239
V K +L L+ ++ E+R++ + DF EGVRA+LVDKD+NPKW
Sbjct: 302 --------VVFEQMKQGAKLPSLAKCLEMEFRISQHFLEKPDFFEGVRALLVDKDKNPKW 353
Query: 240 NPASLEEVNQSEVEALFEPLGTGVE 264
P S+++++Q+ V + F+PL E
Sbjct: 354 LPPSIDQIDQTLVNSYFKPLSNNKE 378
>sp|Q58EB4|HIBCH_DANRE 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Danio rerio
GN=hibch PE=2 SV=1
Length = 382
Score = 137 bits (346), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 95/262 (36%), Positives = 136/262 (51%), Gaps = 24/262 (9%)
Query: 1 MDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLG 60
++G+TMG G+G+S HG++R+ TEKTL AMPE GIGLFPDVG Y + G +G +L
Sbjct: 135 INGITMGGGVGLSVHGQFRVATEKTLFAMPETGIGLFPDVGGGYFLPRLQ--GKLGLFLA 192
Query: 61 MTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEG 120
+TG R+ D G+ T +V S + SL++ L V D+ LL Y
Sbjct: 193 LTGFRLKG-RDVQRVGVATHFVQSEKIESLEKDL--VDLKSPSISDVAQLLDSYQEQSHL 249
Query: 121 EAPLKLLLPQITSCFS---SEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFS 177
+A +L + T S SV +I+E LKK S+ +A + + + K +P S
Sbjct: 250 DAEKPFVLQEQTEAIDRLFSAGSVEEIVENLKKDGSA-------FALKQAETLAKMSPTS 302
Query: 178 LCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNP 237
L LT + + A L V EYR++ DF EGVRAVL+DKDQ+P
Sbjct: 303 LKLTFRQIEEGARM---------SLQEVFMMEYRLSQACMNGHDFYEGVRAVLIDKDQSP 353
Query: 238 KWNPASLEEVNQSEVEALFEPL 259
KW P++L V++ V+ F L
Sbjct: 354 KWKPSTLAGVSEQFVDKCFSSL 375
>sp|Q2HJ73|HIBCH_BOVIN 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Bos taurus
GN=HIBCH PE=2 SV=1
Length = 386
Score = 129 bits (324), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/267 (37%), Positives = 150/267 (56%), Gaps = 28/267 (10%)
Query: 1 MDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLG 60
+ G+TMG G+G+S HG++R+ TEK++ AMPE IGLFPDVG Y + G +G +L
Sbjct: 139 IHGITMGGGVGVSVHGQFRVATEKSVFAMPETAIGLFPDVGGGYFLPRLQ--GKLGYFLA 196
Query: 61 MTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALL-----AKYS 115
+TG R+ D AG+ T +V LG L+E LLA+ + P ++ +A + AK
Sbjct: 197 LTGFRLKG-RDVYTAGIATHFVDFEKLGMLEEDLLAL---KSPSKENIADVLETYHAKSK 252
Query: 116 SDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAP 175
+D + L+ + +I S FS+ +V QI++ L++ SS +A E L+ + K +P
Sbjct: 253 TDQDKPFILEEHMDKINSWFSAN-TVEQIVDNLQQDGSS-------FALEQLKVIKKMSP 304
Query: 176 FSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQ 235
SL +T ++ KT L V+ EYR++ DF EGVRAVL+DKDQ
Sbjct: 305 TSLKIT---LRQLMEGSSKT------LPEVLIMEYRLSQACMKGHDFHEGVRAVLIDKDQ 355
Query: 236 NPKWNPASLEEVNQSEVEALFEPLGTG 262
+PKW PA L+EV ++ F+ LG+
Sbjct: 356 SPKWKPADLKEVTDEDLNDYFKSLGSN 382
>sp|Q9SHJ8|HIBC8_ARATH 3-hydroxyisobutyryl-CoA hydrolase-like protein 5 OS=Arabidopsis
thaliana GN=At1g06550 PE=2 SV=2
Length = 387
Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 144/284 (50%), Gaps = 46/284 (16%)
Query: 1 MDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLG 60
++G++MG G + ++ +VTEKT+ A PE G D GFSYI ++ PG +G +L
Sbjct: 112 VNGISMGGGAALMVPMKFSVVTEKTVFATPEASFGFHTDCGFSYIHSRLPG--HLGEFLA 169
Query: 61 MTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVT-------------FSEDPHQDI 107
+TG R++ + + G+ T +VPSG L L+ L+++ FSE + D
Sbjct: 170 LTGARLNG-KELVAIGMATHFVPSGKLMDLEARLVSLDSGDADVVQSTIEEFSEKVNLDK 228
Query: 108 VALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEAL 167
++L K S I CFS E SV+QII+ ++ A +W +
Sbjct: 229 DSILNKQSV--------------INECFSKE-SVKQIIQAF---EAEASKDGNEWITPVI 270
Query: 168 QGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVAL---RSSLRSDFAE 224
+G+ + +P L + + +T LS +K E+R+ L R ++ D E
Sbjct: 271 KGLKRSSPTGLKIV---LQSIREGRKQT------LSDCLKKEFRLTLNILRKTISPDMYE 321
Query: 225 GVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLGTGVEELKV 268
G+RA+ +DKD +PKWNPA+L+EV+ ++ ++F+ EL++
Sbjct: 322 GIRALTIDKDNSPKWNPATLDEVDDEKINSVFKLFEDDDIELQI 365
>sp|Q8RXN4|HIBC5_ARATH 3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial
OS=Arabidopsis thaliana GN=At4g31810 PE=2 SV=1
Length = 409
Score = 125 bits (314), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 135/261 (51%), Gaps = 20/261 (7%)
Query: 1 MDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLG 60
MDGVTMG G GIS G +R+ T+KT+LA PE IG PD G SY ++ P G +G YL
Sbjct: 144 MDGVTMGCGGGISLPGMFRVATDKTVLAHPEVQIGFHPDAGASYYLSRLP--GYLGEYLA 201
Query: 61 MTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEG 120
+TG++++ + + GL T Y + L L E + ++DP I LA+Y
Sbjct: 202 LTGQKLNG-VEMIACGLATHYCLNARL-PLIEERIGKLLTDDPAV-IEDSLAQYGDLVYP 258
Query: 121 EAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCL 180
++ L ++ + +V +IIE + ++ A S +W + L+ + + +P SL +
Sbjct: 259 DSSSVLHKIELIDKYFGLDTVEEIIEAM---ENEAANSCNEWCKKTLKQIKEASPLSLKI 315
Query: 181 TQKYFSKVASAHGKTDNELSKLSGVMKYEYRVAL---RSSLRSDFAEGVRAVLVDKDQNP 237
T + + L + +EYR+++ + DF EG+RA LVDKD P
Sbjct: 316 TLQSIR---------EGRFQTLDQCLTHEYRISICGVSKVVSGDFCEGIRARLVDKDFAP 366
Query: 238 KWNPASLEEVNQSEVEALFEP 258
KW+P LE+V++ V+ F P
Sbjct: 367 KWDPPRLEDVSKDMVDCYFTP 387
>sp|O74802|HIBCH_SCHPO 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=ehd3 PE=3 SV=1
Length = 429
Score = 108 bits (271), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 128/259 (49%), Gaps = 20/259 (7%)
Query: 1 MDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLG 60
M+G+TMG G G++ H +RI E T+ AMPE GIG F DV S+ ++ P G G YLG
Sbjct: 159 MNGITMGGGSGLAMHVPFRIACEDTMFAMPETGIGYFTDVAASFFFSRLP--GYFGTYLG 216
Query: 61 MTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSE--DPHQDIVALLAKYSSDP 118
+T + I D L G+ T +VP L++ L + S+ + I+ SS P
Sbjct: 217 LTSQ-IVKGYDCLRTGIATHFVPKHMFPHLEDRLAELNTSDISKINNTILEFAEFASSSP 275
Query: 119 EGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSL 178
P ++ I CF +V II LK++ S+ +++A++A ++ + +P S+
Sbjct: 276 PTFTP--DVMDVINKCFCKNDTV-DIIRALKEYASNT-SALAEFAKSTVKTLYSKSPTSI 331
Query: 179 CLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPK 238
+T + A +S Y++ V+ + DF EGV A L+ K +NPK
Sbjct: 332 AVTNRLIKSAAKW---------SISEAFYYDHIVSYYMLKQPDFVEGVNAQLITKTKNPK 382
Query: 239 WNPASLEEVNQSEVEALFE 257
W+ + E + ++E F+
Sbjct: 383 WSKS--HEYHFKDLENYFK 399
>sp|Q5XF59|HIBC4_ARATH 3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial
OS=Arabidopsis thaliana GN=At3g60510 PE=2 SV=1
Length = 401
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 131/246 (53%), Gaps = 24/246 (9%)
Query: 16 GRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFA 75
G +R+ T++T+ A PE IG PD G S+ + P G +G YLG+TG ++S ++ L
Sbjct: 155 GTFRVATDRTIFATPETIIGFHPDAGASFNLSHLP--GRLGEYLGLTGLKLSG-AEMLAC 211
Query: 76 GLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYS--SDPEGEAPLKLLLPQITS 133
GL T Y+ S + ++E L + ++DP + + L K + + PE ++ + +
Sbjct: 212 GLATHYIRSEEVPVMEEQLKKL-LTDDPSV-VESCLEKCAEVAHPEKTGVIR-RIDLLEK 268
Query: 134 CFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHG 193
CFS + +V +II+ L+ S + + W L+ + + +P SL KVA
Sbjct: 269 CFSHD-TVEEIIDSLEIEASRRKDT---WCITTLRRLKESSPLSL--------KVA-LRS 315
Query: 194 KTDNELSKLSGVMKYEYRVALR---SSLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQS 250
+ L L + EYR++L+ + +F EGVRA L+DKD+ PKW+P SLE+V++
Sbjct: 316 IREGRLQTLDQCLIREYRMSLQGLIGPMSGNFCEGVRARLIDKDEAPKWDPPSLEKVSED 375
Query: 251 EVEALF 256
V+ F
Sbjct: 376 MVDDYF 381
>sp|P28817|HIBCH_YEAST 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=EHD3 PE=1
SV=2
Length = 500
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 120/258 (46%), Gaps = 34/258 (13%)
Query: 1 MDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSY----IAAKGPGGGSVG 56
MDG+TMG G+G+S H +RI TE T AMPE IG FPDVG ++ I +
Sbjct: 142 MDGITMGGGVGLSIHTPFRIATENTKWAMPEMDIGFFPDVGSTFALPRIVTLANSNSQMA 201
Query: 57 AYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEAL--LAVTFSEDPHQDIVALLAKY 114
YL +TG+ + T +DA GL + YV S NL +L++ L ++ F+ DP +
Sbjct: 202 LYLCLTGE-VVTGADAYMLGLASHYVSSENLDALQKRLGEISPPFNNDPQSAYFFGMVNE 260
Query: 115 SSDPEGEAPL---------KLLLPQITSCFSSEK--SVRQIIEELKKHQSSAETSVAQWA 163
S D E +PL L I +CF+ K ++ I+ L++++ SAE +A
Sbjct: 261 SID-EFVSPLPKDYVFKYSNEKLNVIEACFNLSKNGTIEDIMNNLRQYEGSAEGKA--FA 317
Query: 164 DEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSD-- 221
E + +P SL + + + + H + +K + A + D
Sbjct: 318 QEIKTKLLTKSPSSLQIALRLVQENSRDH---------IESAIKRDLYTAANMCMNQDSL 368
Query: 222 --FAEGVRAVLVDKDQNP 237
F+E + L+DK + P
Sbjct: 369 VEFSEATKHKLIDKQRVP 386
>sp|Q1Q8J9|FADB_PSYCK Fatty acid oxidation complex subunit alpha OS=Psychrobacter
cryohalolentis (strain K5) GN=fadB PE=3 SV=1
Length = 719
Score = 37.0 bits (84), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 30/149 (20%)
Query: 1 MDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLG 60
++G +G G ++ YR++++K ++ +PE +G+FP GF GG+V
Sbjct: 110 INGAALGGGCEMTLVCEYRVMSDKAIIGLPETQLGIFP--GF---------GGTV----- 153
Query: 61 MTGKRISTPSDAL-FAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQD-IVALLAKYSSD- 117
R+ +AL GT P L +LK L+ T + D QD + L+ K SD
Sbjct: 154 -RSTRVIGIDNALELIATGT---PKKALDALKLGLVDATVAADDLQDAAIDLVKKCISDE 209
Query: 118 -------PEGEAPLKLLLPQITSCFSSEK 139
E P+KL + F+S K
Sbjct: 210 LDWQAKREEKLVPVKLNQLEQAMAFNSAK 238
>sp|A6TC19|FADJ_KLEP7 Fatty acid oxidation complex subunit alpha OS=Klebsiella pneumoniae
subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
GN=fadJ PE=3 SV=1
Length = 714
Score = 35.4 bits (80), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 7 GFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRI 66
G + ++ HGR EKT L +PE +GL P G + + G S + +TGK++
Sbjct: 116 GLELALACHGRICSDDEKTRLGLPEVQLGLLPGSGGTQRLPRLI-GVSTALDMMLTGKQL 174
Query: 67 STPSDALFAGLGTDYVPSGNL 87
P AL AGL + VP L
Sbjct: 175 R-PRQALKAGLVDEVVPQAIL 194
>sp|A4TM82|FADJ_YERPP Fatty acid oxidation complex subunit alpha OS=Yersinia pestis
(strain Pestoides F) GN=fadJ PE=3 SV=1
Length = 774
Score = 35.4 bits (80), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Query: 7 GFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGM--TGK 64
G + ++ H R + +KT+L +PE +GL P G + + P V L M TGK
Sbjct: 150 GLELALACHSRICSLDDKTVLGLPEVQLGLLPGSGGTQ---RLPRLVGVSKALDMILTGK 206
Query: 65 RISTPSDALFAGLGTDYVP 83
+I P AL GL D VP
Sbjct: 207 QIR-PRQALKMGLVDDVVP 224
>sp|A4YI89|HPCD_METS5 3-hydroxypropionyl-coenzyme A dehydratase OS=Metallosphaera sedula
(strain ATCC 51363 / DSM 5348) GN=Msed_2001 PE=1 SV=1
Length = 259
Score = 35.0 bits (79), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Query: 1 MDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLG 60
++G +G G+ ++ RI E+ L +PE +G++P G + + G G +
Sbjct: 103 INGYALGGGLELALACDIRIAAEEAQLGLPEINLGIYPGYGGTQRLTRVIGKGRALEMM- 161
Query: 61 MTGKRISTPSDALFAGLGTDYVPSGNL 87
MTG RI DA GL VP NL
Sbjct: 162 MTGDRIPG-KDAEKYGLVNRVVPLANL 187
>sp|Q668V1|FADJ_YERPS Fatty acid oxidation complex subunit alpha OS=Yersinia
pseudotuberculosis serotype I (strain IP32953) GN=fadJ
PE=3 SV=2
Length = 753
Score = 35.0 bits (79), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Query: 7 GFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGM--TGK 64
G + ++ H R + +KT+L +PE +GL P G + + P V L M TGK
Sbjct: 123 GLELALACHSRICSLDDKTVLGLPEVQLGLLPGSGGTQ---RLPRLVGVSKALDMILTGK 179
Query: 65 RISTPSDALFAGLGTDYVP 83
+I P AL GL D VP
Sbjct: 180 QIR-PRQALKMGLVDDVVP 197
>sp|Q9L1B1|ARLY_STRCO Argininosuccinate lyase OS=Streptomyces coelicolor (strain ATCC
BAA-471 / A3(2) / M145) GN=argH PE=3 SV=1
Length = 475
Score = 35.0 bits (79), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 12/97 (12%)
Query: 124 LKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCL-TQ 182
L++LLP T ++ R+ +EEL S T +A+W + +G PF +
Sbjct: 343 LEVLLPAFTGMMATLTVHRERMEELAPAGFSLATDIAEWL------VKQGVPFRVAHEVA 396
Query: 183 KYFSKVASAHGK-----TDNELSKLSGVMKYEYRVAL 214
KVA A GK TD + +K+S + E R L
Sbjct: 397 GECVKVAEADGKELDELTDEQFAKISEHLTPEVRTVL 433
>sp|Q1CHK2|FADJ_YERPN Fatty acid oxidation complex subunit alpha OS=Yersinia pestis bv.
Antiqua (strain Nepal516) GN=fadJ PE=3 SV=2
Length = 747
Score = 35.0 bits (79), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Query: 7 GFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGM--TGK 64
G + ++ H R + +KT+L +PE +GL P G + + P V L M TGK
Sbjct: 123 GLELALACHSRICSLDDKTVLGLPEVQLGLLPGSGGTQ---RLPRLVGVSKALDMILTGK 179
Query: 65 RISTPSDALFAGLGTDYVP 83
+I P AL GL D VP
Sbjct: 180 QIR-PRQALKMGLVDDVVP 197
>sp|Q8ZD45|FADJ_YERPE Fatty acid oxidation complex subunit alpha OS=Yersinia pestis
GN=fadJ PE=3 SV=2
Length = 747
Score = 35.0 bits (79), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Query: 7 GFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGM--TGK 64
G + ++ H R + +KT+L +PE +GL P G + + P V L M TGK
Sbjct: 123 GLELALACHSRICSLDDKTVLGLPEVQLGLLPGSGGTQ---RLPRLVGVSKALDMILTGK 179
Query: 65 RISTPSDALFAGLGTDYVP 83
+I P AL GL D VP
Sbjct: 180 QIR-PRQALKMGLVDDVVP 197
>sp|Q1C660|FADJ_YERPA Fatty acid oxidation complex subunit alpha OS=Yersinia pestis bv.
Antiqua (strain Antiqua) GN=fadJ PE=3 SV=2
Length = 747
Score = 35.0 bits (79), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Query: 7 GFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGM--TGK 64
G + ++ H R + +KT+L +PE +GL P G + + P V L M TGK
Sbjct: 123 GLELALACHSRICSLDDKTVLGLPEVQLGLLPGSGGTQ---RLPRLVGVSKALDMILTGK 179
Query: 65 RISTPSDALFAGLGTDYVP 83
+I P AL GL D VP
Sbjct: 180 QIR-PRQALKMGLVDDVVP 197
>sp|A7FGK1|FADJ_YERP3 Fatty acid oxidation complex subunit alpha OS=Yersinia
pseudotuberculosis serotype O:1b (strain IP 31758)
GN=fadJ PE=3 SV=1
Length = 747
Score = 35.0 bits (79), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Query: 7 GFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGM--TGK 64
G + ++ H R + +KT+L +PE +GL P G + + P V L M TGK
Sbjct: 123 GLELALACHSRICSLDDKTVLGLPEVQLGLLPGSGGTQ---RLPRLVGVSKALDMILTGK 179
Query: 65 RISTPSDALFAGLGTDYVP 83
+I P AL GL D VP
Sbjct: 180 QIR-PRQALKMGLVDDVVP 197
>sp|Q4FQC6|FADB_PSYA2 Fatty acid oxidation complex subunit alpha OS=Psychrobacter
arcticus (strain DSM 17307 / 273-4) GN=fadB PE=3 SV=1
Length = 719
Score = 34.7 bits (78), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 19/113 (16%)
Query: 1 MDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLG 60
++G +G G ++ YR++++K ++ +PE +G+FP GF GG+V
Sbjct: 110 INGAALGGGCEMTLVCEYRVMSDKAIIGLPETQLGIFP--GF---------GGTV----- 153
Query: 61 MTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAK 113
R+ +AL L P L +LK L+ T + D QD L K
Sbjct: 154 -RSTRVIGIDNAL--ELIATGAPKKALDALKLGLVDATVAADDLQDAAIDLVK 203
>sp|A7MH81|FADJ_CROS8 Fatty acid oxidation complex subunit alpha OS=Cronobacter sakazakii
(strain ATCC BAA-894) GN=fadJ PE=3 SV=1
Length = 717
Score = 34.7 bits (78), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Query: 1 MDGVTMGFGIGISGHGRYRIVTE--KTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAY 58
+ G +G G+ ++ RI T+ KTLL +PE +GL P G + + G S
Sbjct: 108 IHGACLGGGLELALACHSRICTDDVKTLLGLPEVQLGLLPGSGGTQRLPRLV-GVSTALE 166
Query: 59 LGMTGKRISTPSDALFAGLGTDYVPSGNL 87
+ + GK++ P AL AGL D VP L
Sbjct: 167 MILAGKQLR-PRQALKAGLVDDVVPQSIL 194
>sp|B7LLD0|FADJ_ESCF3 Fatty acid oxidation complex subunit alpha OS=Escherichia
fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73)
GN=fadJ PE=3 SV=1
Length = 714
Score = 33.9 bits (76), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 7 GFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRI 66
G + ++ HGR KT+L +PE +GL P G + + G S + +TGK++
Sbjct: 116 GLELALACHGRICTDDPKTILGLPEVQLGLLPGSGGTQRLPRLV-GLSTALDMILTGKQL 174
Query: 67 STPSDALFAGLGTDYVPSGNL 87
P AL +GL + VP L
Sbjct: 175 R-PGQALKSGLVDEIVPQSIL 194
>sp|B4TQC2|FADJ_SALSV Fatty acid oxidation complex subunit alpha OS=Salmonella
schwarzengrund (strain CVM19633) GN=fadJ PE=3 SV=1
Length = 715
Score = 33.9 bits (76), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 7/135 (5%)
Query: 1 MDGVTMGFGIGISGHGRYRIVTE--KTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAY 58
+ G +G G+ ++ RI T+ KT+L +PE +GL P G + + G S
Sbjct: 108 IHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGTQRLPRLV-GVSTALD 166
Query: 59 LGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDP 118
+ +TGK++ AL AGL D VP L EA + + E Q + + + + P
Sbjct: 167 MILTGKQLRA-RQALRAGLVDDVVPQ---TILLEAAVELAKKERLAQRTLPVRERILAGP 222
Query: 119 EGEAPLKLLLPQITS 133
G A L L+ + T+
Sbjct: 223 LGRALLFRLVRKKTA 237
>sp|A8GH86|FADJ_SERP5 Fatty acid oxidation complex subunit alpha OS=Serratia
proteamaculans (strain 568) GN=fadJ PE=3 SV=2
Length = 715
Score = 33.9 bits (76), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 7 GFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRI 66
G + ++ HGR + +KT L +PE +GL P G + + G S + +TGK I
Sbjct: 120 GLELALACHGRVCSLDDKTALGLPEVQLGLLPGSGGTQRLPRLI-GASKALDMILTGKHI 178
Query: 67 STPSDALFAGLGTDYVPSGNL 87
AL GL D VP L
Sbjct: 179 RA-RQALRLGLVDDAVPQSIL 198
>sp|B4TCA8|FADJ_SALHS Fatty acid oxidation complex subunit alpha OS=Salmonella heidelberg
(strain SL476) GN=fadJ PE=3 SV=1
Length = 715
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 7/135 (5%)
Query: 1 MDGVTMGFGIGISGHGRYRIVTE--KTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAY 58
+ G +G G+ ++ RI T+ KT+L +PE +GL P G + + G S
Sbjct: 108 IHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGTQRLPRLV-GVSTALD 166
Query: 59 LGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDP 118
+ +TGK++ AL AGL D VP L EA + + E Q + + + + P
Sbjct: 167 MILTGKQLRA-RQALKAGLVDDVVPQ---TILLEAAVELAKKERLAQRTLPVRERILAGP 222
Query: 119 EGEAPLKLLLPQITS 133
G A L L+ + T+
Sbjct: 223 LGRALLFRLVRKKTA 237
>sp|B5EZR9|FADJ_SALA4 Fatty acid oxidation complex subunit alpha OS=Salmonella agona
(strain SL483) GN=fadJ PE=3 SV=1
Length = 715
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 7/135 (5%)
Query: 1 MDGVTMGFGIGISGHGRYRIVTE--KTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAY 58
+ G +G G+ ++ RI T+ KT+L +PE +GL P G + + G S
Sbjct: 108 IHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGTQRLPRLV-GVSTALD 166
Query: 59 LGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDP 118
+ +TGK++ AL AGL D VP L EA + + E Q + + + + P
Sbjct: 167 MILTGKQLRA-RQALKAGLVDDVVPQ---TILLEAAVELAKKERLAQRTLPVRERILAGP 222
Query: 119 EGEAPLKLLLPQITS 133
G A L L+ + T+
Sbjct: 223 LGRALLFRLVRKKTA 237
>sp|A9N453|FADJ_SALPB Fatty acid oxidation complex subunit alpha OS=Salmonella paratyphi
B (strain ATCC BAA-1250 / SPB7) GN=fadJ PE=3 SV=1
Length = 715
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 7/135 (5%)
Query: 1 MDGVTMGFGIGISGHGRYRIVTE--KTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAY 58
+ G +G G+ ++ RI T+ KT+L +PE +GL P G + + G S
Sbjct: 108 IHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGTQRLPRLV-GVSTALD 166
Query: 59 LGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDP 118
+ +TGK++ AL AGL D VP L EA + + E Q + + + + P
Sbjct: 167 MILTGKQLRA-RQALKAGLVDDVVPQ---TILLEAAVELAKKERLAQRTLPVRERILAGP 222
Query: 119 EGEAPLKLLLPQITS 133
G A L L+ + T+
Sbjct: 223 LGRALLFRLVRKKTA 237
>sp|B5R3R9|FADJ_SALEP Fatty acid oxidation complex subunit alpha OS=Salmonella
enteritidis PT4 (strain P125109) GN=fadJ PE=3 SV=1
Length = 715
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 7/135 (5%)
Query: 1 MDGVTMGFGIGISGHGRYRIVTE--KTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAY 58
+ G +G G+ ++ RI T+ KT+L +PE +GL P G + + G S
Sbjct: 108 IHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGTQRLPRLV-GVSTALD 166
Query: 59 LGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDP 118
+ +TGK++ AL AGL D VP L EA + + E Q + + + + P
Sbjct: 167 MILTGKQLRA-RQALKAGLVDDVVPQ---TILLEAAVELAKKERLAQRTLPVRERILAGP 222
Query: 119 EGEAPLKLLLPQITS 133
G A L L+ + T+
Sbjct: 223 LGRALLFRLVRKKTA 237
>sp|B4SZR0|FADJ_SALNS Fatty acid oxidation complex subunit alpha OS=Salmonella newport
(strain SL254) GN=fadJ PE=3 SV=1
Length = 715
Score = 33.5 bits (75), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 7/135 (5%)
Query: 1 MDGVTMGFGIGISGHGRYRIVTE--KTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAY 58
+ G +G G+ ++ RI T+ KT+L +PE +GL P G + + G S
Sbjct: 108 IHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGTQRLPRLV-GVSTALD 166
Query: 59 LGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDP 118
+ +TGK++ AL AGL D VP L EA + + E Q + + + + P
Sbjct: 167 MILTGKQLRA-RQALKAGLVDDVVPQ---TILLEAAVELAKKERLAQRTLPVRERILAGP 222
Query: 119 EGEAPLKLLLPQITS 133
G A L L+ + T+
Sbjct: 223 LGRALLFRLVRKKTA 237
>sp|B5FPN1|FADJ_SALDC Fatty acid oxidation complex subunit alpha OS=Salmonella dublin
(strain CT_02021853) GN=fadJ PE=3 SV=1
Length = 715
Score = 33.5 bits (75), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 7/135 (5%)
Query: 1 MDGVTMGFGIGISGHGRYRIVTE--KTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAY 58
+ G +G G+ ++ RI T+ KT+L +PE +GL P G + + G S
Sbjct: 108 IHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGTQRLPR-LVGVSTALD 166
Query: 59 LGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDP 118
+ +TGK++ AL AGL D VP L EA + + E Q + + + + P
Sbjct: 167 MILTGKQLRA-RQALKAGLVDDVVPQ---TILLEAAVELAKKERLAQRTLPVRERILAGP 222
Query: 119 EGEAPLKLLLPQITS 133
G A L L+ + T+
Sbjct: 223 LGRALLFRLVRKKTA 237
>sp|Q8ZNA7|FADJ_SALTY Fatty acid oxidation complex subunit alpha OS=Salmonella
typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
GN=fadJ PE=3 SV=1
Length = 715
Score = 33.5 bits (75), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 7/135 (5%)
Query: 1 MDGVTMGFGIGISGHGRYRIVTE--KTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAY 58
+ G +G G+ ++ RI T+ KT+L +PE +GL P G + + G S
Sbjct: 108 IHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGTQRLPRLV-GVSTALD 166
Query: 59 LGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDP 118
+ +TGK++ AL AGL D VP L EA + + E Q + + + + P
Sbjct: 167 MILTGKQLRA-RQALKAGLVDDVVPQ---TILLEAAVELAKKERLAQRTLPVRERILAGP 222
Query: 119 EGEAPLKLLLPQITS 133
G A L L+ + T+
Sbjct: 223 LGRALLFRLVRKKTA 237
>sp|Q57LW6|FADJ_SALCH Fatty acid oxidation complex subunit alpha OS=Salmonella
choleraesuis (strain SC-B67) GN=fadJ PE=3 SV=1
Length = 715
Score = 33.5 bits (75), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 7/135 (5%)
Query: 1 MDGVTMGFGIGISGHGRYRIVTE--KTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAY 58
+ G +G G+ ++ RI T+ KT+L +PE +GL P G + + G S
Sbjct: 108 IHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGTQRLPRLV-GVSTALD 166
Query: 59 LGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDP 118
+ +TGK++ AL AGL D VP L EA + + E Q + + + + P
Sbjct: 167 MILTGKQLRA-RQALKAGLVDDVVPQ---TILLEAAVELAKKERLAQRTLPVRERILAGP 222
Query: 119 EGEAPLKLLLPQITS 133
G A L L+ + T+
Sbjct: 223 LGRALLFRLVRKKTA 237
>sp|B5RCL3|FADJ_SALG2 Fatty acid oxidation complex subunit alpha OS=Salmonella gallinarum
(strain 287/91 / NCTC 13346) GN=fadJ PE=3 SV=1
Length = 715
Score = 33.5 bits (75), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 7/135 (5%)
Query: 1 MDGVTMGFGIGISGHGRYRIVTE--KTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAY 58
+ G +G G+ ++ RI T+ KT+L +PE +GL P G + + G S
Sbjct: 108 IHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGTQRLPRLV-GVSTALD 166
Query: 59 LGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDP 118
+ +TGK++ AL AGL D VP L EA + + E Q + + + + P
Sbjct: 167 MILTGKQLRA-RQALKAGLVDDVVPQ---TILLEAAVELAKKERLAQRTLPVRERILAGP 222
Query: 119 EGEAPLKLLLPQITS 133
G A L L+ + T+
Sbjct: 223 LGRALLFRLVRKKTA 237
>sp|A5WH99|FADB_PSYWF Fatty acid oxidation complex subunit alpha OS=Psychrobacter sp.
(strain PRwf-1) GN=fadB PE=3 SV=1
Length = 719
Score = 33.5 bits (75), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 88/218 (40%), Gaps = 27/218 (12%)
Query: 1 MDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLG 60
++G +G G ++ YR++ +K + +PE +G+FP G S + G + L
Sbjct: 110 INGAALGGGCEMTLVCEYRVMGDKAQIGLPETQLGIFPGFGGSVRTPRVIGIDN-AVELI 168
Query: 61 MTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEG 120
TGK P++AL GL V +L L+ + D L + E
Sbjct: 169 ATGKA-QKPAEALKLGLVDAVVAQDDLQEAAVDLVKKCIAGD--------LDWQAKREEK 219
Query: 121 EAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSA------ETSVAQWADEALQ----GM 170
P+KL + T FS+ K+ K++ + A E V DEA++ G
Sbjct: 220 LQPVKLNQLEQTMAFSTAKAAIFAKANPKQYPAPAIAIETIEKHVNLGRDEAIKVEAAGF 279
Query: 171 GKGAP-------FSLCLTQKYFSKVASAHGKTDNELSK 201
K A L L + K+A H K +++++
Sbjct: 280 AKAAKTPQAESLVGLFLNDQTVKKLAKQHTKNAHDINE 317
>sp|Q8Z4Z0|FADJ_SALTI Fatty acid oxidation complex subunit alpha OS=Salmonella typhi
GN=fadJ PE=3 SV=1
Length = 715
Score = 33.5 bits (75), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 7/135 (5%)
Query: 1 MDGVTMGFGIGISGHGRYRIVTE--KTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAY 58
+ G +G G+ ++ RI T+ KT+L +PE +GL P G + + G S
Sbjct: 108 IHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGTQRLPRLV-GVSTALD 166
Query: 59 LGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDP 118
+ +TGK++ AL AGL D VP L EA + + E Q + + + + P
Sbjct: 167 MILTGKQLRA-RQALKAGLVDDVVPQ---TILLEAAVELAKKERLAQRTLPVRERILAGP 222
Query: 119 EGEAPLKLLLPQITS 133
G A L L+ + T+
Sbjct: 223 LGRALLFRLVRKKTA 237
>sp|P77399|FADJ_ECOLI Fatty acid oxidation complex subunit alpha OS=Escherichia coli
(strain K12) GN=fadJ PE=1 SV=1
Length = 714
Score = 33.1 bits (74), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 52/118 (44%), Gaps = 5/118 (4%)
Query: 7 GFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRI 66
G + ++ HGR KT+L +PE +GL P G + + G S + +TGK++
Sbjct: 116 GLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLI-GVSTALEMILTGKQL 174
Query: 67 STPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPL 124
AL GL D VP L EA + + E P + + + + P G A L
Sbjct: 175 RA-KQALKLGLVDDVVPH---SILLEAAVELAKKERPSSRPLPVRERILAGPLGRALL 228
>sp|B1X9L4|FADJ_ECODH Fatty acid oxidation complex subunit alpha OS=Escherichia coli
(strain K12 / DH10B) GN=fadJ PE=3 SV=1
Length = 714
Score = 33.1 bits (74), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 52/118 (44%), Gaps = 5/118 (4%)
Query: 7 GFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRI 66
G + ++ HGR KT+L +PE +GL P G + + G S + +TGK++
Sbjct: 116 GLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLI-GVSTALEMILTGKQL 174
Query: 67 STPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPL 124
AL GL D VP L EA + + E P + + + + P G A L
Sbjct: 175 RA-KQALKLGLVDDVVPH---SILLEAAVELAKKERPSSRPLPVRERILAGPLGRALL 228
>sp|C4ZVN2|FADJ_ECOBW Fatty acid oxidation complex subunit alpha OS=Escherichia coli
(strain K12 / MC4100 / BW2952) GN=fadJ PE=3 SV=1
Length = 714
Score = 33.1 bits (74), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 52/118 (44%), Gaps = 5/118 (4%)
Query: 7 GFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRI 66
G + ++ HGR KT+L +PE +GL P G + + G S + +TGK++
Sbjct: 116 GLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLI-GVSTALEMILTGKQL 174
Query: 67 STPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPL 124
AL GL D VP L EA + + E P + + + + P G A L
Sbjct: 175 RA-KQALKLGLVDDVVPH---SILLEAAVELAKKERPSSRPLPVRERILAGPLGRALL 228
>sp|Q6PB66|LPPRC_MOUSE Leucine-rich PPR motif-containing protein, mitochondrial OS=Mus
musculus GN=Lrpprc PE=1 SV=2
Length = 1392
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 106 DIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADE 165
DI+ ++ K DP+ E + + P CF S +SVR ++E + +S+ + A+ +E
Sbjct: 459 DILKIMNKVGVDPDQETYINYVFP----CFDSAQSVRAALQENECLLASSTFAQAEVKNE 514
Query: 166 ALQG 169
A+ G
Sbjct: 515 AING 518
>sp|A8NSD1|THI4_COPC7 Thiamine thiazole synthase OS=Coprinopsis cinerea (strain Okayama-7
/ 130 / ATCC MYA-4618 / FGSC 9003) GN=CC1G_04976 PE=3
SV=2
Length = 313
Score = 32.7 bits (73), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 30/62 (48%), Gaps = 7/62 (11%)
Query: 38 PDVGFSYI-AAKGPGGGSVGAYLG---MTGKRISTPSDALFAGLGTDYVPSGNLGSLKEA 93
PD+ + + A PGGG A+LG MT I P+DA LG Y GN +K A
Sbjct: 84 PDLKITIVEAGVAPGGG---AWLGGQLMTPMVIRKPADAFLRELGVPYEDEGNFVVVKHA 140
Query: 94 LL 95
L
Sbjct: 141 AL 142
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.132 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,819,660
Number of Sequences: 539616
Number of extensions: 4398935
Number of successful extensions: 9106
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 92
Number of HSP's that attempted gapping in prelim test: 9057
Number of HSP's gapped (non-prelim): 119
length of query: 268
length of database: 191,569,459
effective HSP length: 115
effective length of query: 153
effective length of database: 129,513,619
effective search space: 19815583707
effective search space used: 19815583707
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)