BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 024357
         (268 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q44123|FBPB_ACTPL Ferric transport system permease protein FbpB OS=Actinobacillus
           pleuropneumoniae GN=fbpB PE=3 SV=1
          Length = 687

 Score = 32.0 bits (71), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 14/100 (14%)

Query: 152 LLLFIELSAELYKAGVGDNI-------EAYILFAVAELIWFSLDRTWLGFTLASIIGLVC 204
           +LLF  +SA +YK  +G ++        A   FA A+L     D+  +G  L SII L+ 
Sbjct: 91  ILLFAFISATIYKVSMGYSVIVLIATLTALATFAFAKLKMMQGDKFIIG-ALLSIILLIF 149

Query: 205 PLAEIPIMKLFHLWYY------PKANIEILGQGLVAWTIT 238
                P + +F   +Y      P+  + ILGQG +   I+
Sbjct: 150 FFIVYPTVAIFISMFYDGETFAPEQVVRILGQGYIVRVIS 189


>sp|Q6DF80|INSI1_XENLA Insulin-induced gene 1 protein OS=Xenopus laevis GN=insig1 PE=2
           SV=1
          Length = 251

 Score = 31.2 bits (69), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 11/146 (7%)

Query: 62  SLALFSAGFFLGPAIDGLHSRVNLVVYENGSINVGPLHTNIWVPPLLGLFYCTVGLLQLF 121
           SL LF+ G FL   ++ L  + N+ ++    I      +  WVPP  G     VGLL   
Sbjct: 62  SLVLFTVGVFLALVLNLLQIQRNVTLFPEEVIAT-IFSSAWWVPPCCGTAAAVVGLLYPC 120

Query: 122 LDDTDSDRASSESEVPDDGSLQKTVFALITLLLFIELSAELYKAGVGDNIEAYILFAVAE 181
           +D    +    + E             +  + +F+ ++    K    +N++  +  A   
Sbjct: 121 IDSRIGEPHKFKREWAS---------VMRCIAVFVGINHASAKLDFANNVQLSLTLAALS 171

Query: 182 L-IWFSLDRTWLGFTLASIIGLVCPL 206
           L +W++ DR+  G  L   I  +  L
Sbjct: 172 LGLWWTFDRSRSGLGLGITIAFLATL 197


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.325    0.139    0.437 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96,176,940
Number of Sequences: 539616
Number of extensions: 3775502
Number of successful extensions: 9094
Number of sequences better than 100.0: 14
Number of HSP's better than 100.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 9091
Number of HSP's gapped (non-prelim): 15
length of query: 268
length of database: 191,569,459
effective HSP length: 115
effective length of query: 153
effective length of database: 129,513,619
effective search space: 19815583707
effective search space used: 19815583707
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 60 (27.7 bits)