Query 024364
Match_columns 268
No_of_seqs 182 out of 1543
Neff 8.9
Searched_HMMs 46136
Date Fri Mar 29 04:00:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024364.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024364hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03145 Protein phosphatase 2 100.0 2.5E-43 5.4E-48 313.4 23.9 212 46-263 63-292 (365)
2 KOG0697 Protein phosphatase 1B 100.0 1.3E-43 2.8E-48 292.2 16.3 229 31-265 5-255 (379)
3 PF00481 PP2C: Protein phospha 100.0 3.3E-42 7.2E-47 295.2 15.6 212 49-265 1-226 (254)
4 KOG0698 Serine/threonine prote 100.0 1.9E-40 4E-45 293.3 22.9 216 48-265 39-268 (330)
5 PTZ00224 protein phosphatase 2 100.0 1.2E-39 2.6E-44 290.8 24.4 216 32-264 6-234 (381)
6 COG0631 PTC1 Serine/threonine 100.0 1.9E-39 4.2E-44 278.2 19.8 208 45-265 5-220 (262)
7 KOG0699 Serine/threonine prote 100.0 6.3E-37 1.4E-41 260.9 15.3 122 139-264 328-460 (542)
8 smart00332 PP2Cc Serine/threon 100.0 4.4E-34 9.6E-39 244.3 22.9 210 47-265 5-223 (255)
9 cd00143 PP2Cc Serine/threonine 100.0 5.6E-34 1.2E-38 243.1 21.9 210 48-265 1-220 (254)
10 KOG0700 Protein phosphatase 2C 100.0 5E-34 1.1E-38 248.1 16.9 201 62-265 84-355 (390)
11 PRK14559 putative protein seri 100.0 4.4E-33 9.6E-38 261.6 22.3 210 45-265 372-603 (645)
12 KOG1323 Serine/threonine phosp 99.9 8.2E-25 1.8E-29 185.3 14.2 191 76-266 141-434 (493)
13 PF13672 PP2C_2: Protein phosp 99.9 9.4E-21 2E-25 157.9 13.0 177 53-264 3-192 (212)
14 KOG1379 Serine/threonine prote 99.8 2.3E-19 5E-24 152.0 15.5 166 61-265 89-271 (330)
15 KOG0618 Serine/threonine phosp 99.8 2.6E-19 5.7E-24 169.5 13.3 228 27-266 503-741 (1081)
16 smart00331 PP2C_SIG Sigma fact 99.8 4.3E-17 9.3E-22 133.8 18.9 168 48-265 4-174 (193)
17 TIGR02865 spore_II_E stage II 99.3 7.3E-11 1.6E-15 115.1 15.9 155 61-264 565-726 (764)
18 PF07228 SpoIIE: Stage II spor 99.1 2.3E-09 4.9E-14 87.7 13.9 136 77-257 2-141 (193)
19 COG2208 RsbU Serine phosphatas 97.1 0.039 8.5E-07 49.8 16.0 157 62-264 161-327 (367)
20 PRK05457 heat shock protein Ht 54.3 9 0.0002 33.4 2.1 37 229-266 105-141 (284)
21 PRK03982 heat shock protein Ht 51.2 11 0.00023 32.9 2.1 32 234-266 101-132 (288)
22 PRK02391 heat shock protein Ht 50.7 9 0.0002 33.6 1.5 33 233-266 108-140 (296)
23 PRK03072 heat shock protein Ht 49.3 9.7 0.00021 33.2 1.5 26 241-266 109-134 (288)
24 PF09436 DUF2016: Domain of un 46.8 13 0.00028 25.2 1.5 21 236-256 23-43 (72)
25 PRK04897 heat shock protein Ht 43.3 14 0.00031 32.3 1.6 37 229-266 108-144 (298)
26 COG0501 HtpX Zn-dependent prot 41.0 9.2 0.0002 33.1 0.1 24 243-266 141-164 (302)
27 PRK01345 heat shock protein Ht 39.4 19 0.00042 31.9 1.8 25 242-266 107-131 (317)
28 PRK03001 M48 family peptidase; 38.4 19 0.00041 31.2 1.6 24 243-266 108-131 (283)
29 PRK02870 heat shock protein Ht 34.6 25 0.00054 31.5 1.8 25 242-266 156-180 (336)
30 COG2168 DsrH Uncharacterized c 32.4 34 0.00073 24.5 1.8 30 236-266 22-51 (96)
31 PRK01265 heat shock protein Ht 30.9 16 0.00036 32.4 0.0 25 241-266 123-147 (324)
32 PRK10693 response regulator of 28.4 3.9E+02 0.0085 23.1 8.7 90 78-171 162-257 (303)
33 COG3315 O-Methyltransferase in 21.4 98 0.0021 27.1 3.1 24 162-185 104-128 (297)
No 1
>PLN03145 Protein phosphatase 2c; Provisional
Probab=100.00 E-value=2.5e-43 Score=313.43 Aligned_cols=212 Identities=32% Similarity=0.510 Sum_probs=180.3
Q ss_pred CceeEEEEecccCCCCCCCceeeeeeccc--------CCceeEEEEEEcCCCCCchhHHHHHHHHHHHHhccCCCcCHHH
Q 024364 46 NKVSHGYHLVEGQSGHDMEDYLVAEYRKK--------KNHVLGLFAIFDGHLGDRVPTYLKDNLFNNILEESNFWKDPKA 117 (268)
Q Consensus 46 ~~~~~~~~s~~G~r~~~neD~~~~~~~~~--------~~~~~~l~~V~DG~gG~~~a~~~~~~~~~~l~~~~~~~~~~~~ 117 (268)
..++++.+|++|.| ..|||++++..... ......||+|||||||..+++++++.+...+.+.......+.+
T Consensus 63 ~~~~~~~~s~~G~R-~~nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhGG~~age~as~~l~~~i~~~~~~~~~~~~ 141 (365)
T PLN03145 63 PVVRSGAWADIGSR-SSMEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHGGKHAADFACYHLPRFIVEDEDFPREIEK 141 (365)
T ss_pred CceEEEEEccccCC-CCCCCceEecccccccccccccCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHhhhccchhHHH
Confidence 34799999999985 79999987633211 1224689999999999999999999999999876665556788
Q ss_pred HHHHHHHHHhHHHHHhcc-cCCCCCcceEEEEEEeCCeEEEEEcCCceeEEEecCcccccCCCCCChH--HHHHHHHcCC
Q 024364 118 AITNAYRSTDQFILENSM-QLGPGGSTAVTAIVIDGKDLWVANVGDSRAVVCERGSANQITVDHEPHA--ERRRIEKQGG 194 (268)
Q Consensus 118 ~l~~~~~~~~~~i~~~~~-~~~~~~~tt~~~~~i~~~~l~~anvGDSr~~l~~~g~~~~lt~dH~~~~--E~~ri~~~gg 194 (268)
+|.++|.++++.+.+... .....+|||++++++.++.+|++|+||||+|+++++++.+||+||++.+ |++||.+.||
T Consensus 142 al~~af~~~d~~~~~~~~~~~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~g~~~~LT~DH~~~~~~E~~RI~~~Gg 221 (365)
T PLN03145 142 VVSSAFLQTDTAFAEACSLDASLASGTTALAALVVGRSLVVANAGDCRAVLCRRGKAIEMSRDHKPMCSKERKRIEASGG 221 (365)
T ss_pred HHHHHHHHHhHHHHhhhccccCCCCcCcEEEEEEECCeEEEEecCCceEEEEcCCeEEEecCCCCCCCHHHHHHHHHcCC
Confidence 899999999999876542 2224589999999999999999999999999999999999999999988 8999999999
Q ss_pred eEEeCCCCCCcccCceeeeeccCCccccC-------CccccceEEEEEeCCCCeEEEEecCCccCCCCHHHHHHhh
Q 024364 195 FVTSLPGDVPRVNGQLAVARAFGDQSLKA-------HLSSEPDVRHVPIDPSIEFLILASDGLWKVSCYRSIWTSL 263 (268)
Q Consensus 195 ~~~~~~~~~~~~~~~~~ltr~lG~~~~k~-------~v~~~p~i~~~~l~~~d~~liL~SDGl~d~l~~~ei~~il 263 (268)
.+.. .+.++.+.+||+||+..+|. .++++|++..+++.++|+|||||||||||+|+++|+++++
T Consensus 222 ~v~~-----g~v~g~l~vTRalGD~~~k~~k~~~~~~vs~ePdv~~~~l~~~D~fLILaSDGLwdvls~ee~v~~i 292 (365)
T PLN03145 222 YVYD-----GYLNGQLNVARALGDWHMEGMKGSDGGPLSAEPELMTTQLTEEDEFLIIGCDGIWDVFRSQNAVDFA 292 (365)
T ss_pred ceec-----ceECCccccccccccccccccccccCCCcceEEEEEEEECCCCCEEEEEeCCccccCcCHHHHHHHH
Confidence 9863 56778888999999987753 3688999999999999899999999999999999986655
No 2
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-43 Score=292.18 Aligned_cols=229 Identities=29% Similarity=0.463 Sum_probs=198.2
Q ss_pred CCCCCCCCccccCCCCceeEEEEecccCCCCCCCceeeeeeccc-CCceeEEEEEEcCCCCCchhHHHHHHHHHHHHhcc
Q 024364 31 SSSSDTGKGRSKSSSNKVSHGYHLVEGQSGHDMEDYLVAEYRKK-KNHVLGLFAIFDGHLGDRVPTYLKDNLFNNILEES 109 (268)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~s~~G~r~~~neD~~~~~~~~~-~~~~~~l~~V~DG~gG~~~a~~~~~~~~~~l~~~~ 109 (268)
.+.|.+.+-...-..+.++||.+|+||+| -+|||++.+..... .-.+++||+|||||.|.++|.+++++++..+.+..
T Consensus 5 LdKPkteKhn~~G~GNglryg~SSMQGWR-~eMEDah~A~~~l~~~l~dWSfFAVfDGHAGs~va~~c~~hLlehi~sse 83 (379)
T KOG0697|consen 5 LDKPKTEKHNAEGEGNGLRYGVSSMQGWR-VEMEDAHTAVAGLPSPLEDWSFFAVFDGHAGSQVANHCAEHLLEHIISSE 83 (379)
T ss_pred ccCcccccccccCcCCceeeeeccccchh-hhhhhhhhhhhcCCCCccCceEEEEEcCccchHHHHHHHHHHHHHhhhhH
Confidence 34455555555555888999999999999 69999997654442 45789999999999999999999999999998776
Q ss_pred CCCc--------CHHHHHHHHHHHHhHHHHHhcccC--CCCCcceEEEEEEeCCeEEEEEcCCceeEEEecCcccccCCC
Q 024364 110 NFWK--------DPKAAITNAYRSTDQFILENSMQL--GPGGSTAVTAIVIDGKDLWVANVGDSRAVVCERGSANQITVD 179 (268)
Q Consensus 110 ~~~~--------~~~~~l~~~~~~~~~~i~~~~~~~--~~~~~tt~~~~~i~~~~l~~anvGDSr~~l~~~g~~~~lt~d 179 (268)
++.. +...-|+..|.++++.+....... ...+|+|++++++...++|++|+||||++++|+|....-|+|
T Consensus 84 ~F~~~~k~gsv~~~~~GIrtGFL~iDE~mr~~~~~~~~~drsGsTAVcv~vsp~h~y~~NcGDSRavl~rng~~~f~TqD 163 (379)
T KOG0697|consen 84 EFRGMTKNGSVENVEKGIRTGFLSIDEIMRTLSDISKGSDRSGSTAVCVFVSPTHIYIINCGDSRAVLCRNGEVVFSTQD 163 (379)
T ss_pred HHhhhccCCcHHHHHhhHhhcceeHHHHHhhhhhhhcccccCCceEEEEEecCceEEEEecCcchhheecCCceEEeccC
Confidence 5543 677889999999999887655322 234788888889999999999999999999999999999999
Q ss_pred CCChH--HHHHHHHcCCeEEeCCCCCCcccCceeeeeccCCccccC---------CccccceEEEEEeCCCCeEEEEecC
Q 024364 180 HEPHA--ERRRIEKQGGFVTSLPGDVPRVNGQLAVARAFGDQSLKA---------HLSSEPDVRHVPIDPSIEFLILASD 248 (268)
Q Consensus 180 H~~~~--E~~ri~~~gg~~~~~~~~~~~~~~~~~ltr~lG~~~~k~---------~v~~~p~i~~~~l~~~d~~liL~SD 248 (268)
|.|.. |++||.++||.+-- .|+||.++++|+|||+.||. .|+++|++........|+||||+||
T Consensus 164 HKP~~p~EkeRIqnAGGSVMI-----qRvNGsLAVSRAlGDydyK~v~~kgp~eQlVSPEPev~~~~R~eedeFivlACD 238 (379)
T KOG0697|consen 164 HKPYLPKEKERIQNAGGSVMI-----QRVNGSLAVSRALGDYDYKNVPGKGPTEQLVSPEPEVYIIERSEEDEFIVLACD 238 (379)
T ss_pred CCCCChHHHHHHhcCCCeEEE-----EEecceeeeehhccCcccccCCCCCchhcccCCCCceEEeeccccCcEEEEEcc
Confidence 99998 99999999999984 79999999999999999985 3999999999999988899999999
Q ss_pred CccCCCCHHHHHHhhcC
Q 024364 249 GLWKVSCYRSIWTSLCH 265 (268)
Q Consensus 249 Gl~d~l~~~ei~~il~~ 265 (268)
||||+++++|+.+.|..
T Consensus 239 GIwDVMtneelcefv~s 255 (379)
T KOG0697|consen 239 GIWDVMTNEELCEFVKS 255 (379)
T ss_pred chhhhcccHHHHHHHHh
Confidence 99999999999998864
No 3
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 2I0O_A 2POP_C 2POM_A 2J4O_A 2I44_B 3MQ3_A 3N3C_A 2PNQ_B 2P8E_A 2IQ1_A ....
Probab=100.00 E-value=3.3e-42 Score=295.17 Aligned_cols=212 Identities=40% Similarity=0.606 Sum_probs=174.7
Q ss_pred eEEEEecccCCCCCCCceeeeeeccc---CCceeEEEEEEcCCCCCchhHHHHHHHHHHHHhccCCCc--CHHHHHHHHH
Q 024364 49 SHGYHLVEGQSGHDMEDYLVAEYRKK---KNHVLGLFAIFDGHLGDRVPTYLKDNLFNNILEESNFWK--DPKAAITNAY 123 (268)
Q Consensus 49 ~~~~~s~~G~r~~~neD~~~~~~~~~---~~~~~~l~~V~DG~gG~~~a~~~~~~~~~~l~~~~~~~~--~~~~~l~~~~ 123 (268)
.+|+.+.+|.| ..|||++++..... ......+|+|||||||.+++.++...+...+.+...... ++.++|..+|
T Consensus 1 ~~~~~~~~g~r-~~~eD~~~~~~~~~~~~~~~~~~l~~V~DGhgG~~~a~~~~~~l~~~l~~~~~~~~~~~~~~al~~a~ 79 (254)
T PF00481_consen 1 DYGVSSMQGVR-KEMEDRHLIIQNFNSNSGNDNVSLFGVFDGHGGSEAAEYASQNLPEFLKENLSFNDGNDIEEALRQAF 79 (254)
T ss_dssp EEEEEEEECTS-SSHHEEEEEEEEETCCTTEEEEEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred CcCeecCCCCC-CcccCEEEEecCccccCCCCCcEEEEEecCCCChhhHHHHHHHHHHHHHhhcccccccchhhccccee
Confidence 47899999999 69999998765332 356889999999999999999999999977766543332 5789999999
Q ss_pred HH-HhHHHHHhccc-CCCCCcceEEEEEEeCCeEEEEEcCCceeEEEecCccc-ccCCCCCChH--HHHHHHHcCCeEEe
Q 024364 124 RS-TDQFILENSMQ-LGPGGSTAVTAIVIDGKDLWVANVGDSRAVVCERGSAN-QITVDHEPHA--ERRRIEKQGGFVTS 198 (268)
Q Consensus 124 ~~-~~~~i~~~~~~-~~~~~~tt~~~~~i~~~~l~~anvGDSr~~l~~~g~~~-~lt~dH~~~~--E~~ri~~~gg~~~~ 198 (268)
.+ +++.+...... ....+|||++++++.++++|+||+||||+|+++.+... +||+||++.+ |+.||++.||.+..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~~l~vanvGDSravl~~~~~~~~~Lt~dH~~~~~~E~~RI~~~gg~v~~ 159 (254)
T PF00481_consen 80 LAFTDESLYSDSENNESSKSGSTATVALIDGNKLYVANVGDSRAVLCRNGGIIKQLTRDHKPSNPDERERIRKAGGRVSE 159 (254)
T ss_dssp HHHHHHHHHHHHHHHTHTTSEEEEEEEEEETTEEEEEEESS-EEEEEETTEEEEESS---STTSHHHHHHHHHTT-GEEE
T ss_pred eecccccccccccccccccccccccccccccceeEEEeeeeeeeeeeeccccccccccccccchhhccceeecccccccc
Confidence 99 88888763321 34678888889999999999999999999999999888 9999999997 99999999999985
Q ss_pred CCCCCCcccCceeeeeccCCccccC----CccccceEEEEEeCCCCeEEEEecCCccCCCCHHHHHHhhcC
Q 024364 199 LPGDVPRVNGQLAVARAFGDQSLKA----HLSSEPDVRHVPIDPSIEFLILASDGLWKVSCYRSIWTSLCH 265 (268)
Q Consensus 199 ~~~~~~~~~~~~~ltr~lG~~~~k~----~v~~~p~i~~~~l~~~d~~liL~SDGl~d~l~~~ei~~il~~ 265 (268)
..+.++.+++||+||+..+|+ .|+++|++..+++.++|+|||||||||||+|+++|+.+++.+
T Consensus 160 ----~~rv~g~l~~sRalGd~~~k~~~~~~v~~~P~i~~~~l~~~d~flvlaSDGlwd~l~~~ei~~~v~~ 226 (254)
T PF00481_consen 160 ----NGRVNGVLAVSRALGDFDLKPPGKPGVIAEPDISEVDLTPDDEFLVLASDGLWDVLSNEEIVDIVRE 226 (254)
T ss_dssp ----TEEETTTBSSSB-EE-GGGTTCTSSSSB---EEEEEEEBTTEEEEEEE-HHHHTTSHHHHHHHHHHH
T ss_pred ----chhhhhccccccccccccccccccceeeeecccccccccccceEEEEEcccccccCCHHHHHHHHHH
Confidence 478888899999999999998 799999999999999988999999999999999999998854
No 4
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-40 Score=293.33 Aligned_cols=216 Identities=43% Similarity=0.627 Sum_probs=182.6
Q ss_pred eeEE-EEecccCCCCCCCceeeeeeccc----CCc-eeEEEEEEcCCCCCchhHHHHHHHHHHHHhccCCCcC---HHHH
Q 024364 48 VSHG-YHLVEGQSGHDMEDYLVAEYRKK----KNH-VLGLFAIFDGHLGDRVPTYLKDNLFNNILEESNFWKD---PKAA 118 (268)
Q Consensus 48 ~~~~-~~s~~G~r~~~neD~~~~~~~~~----~~~-~~~l~~V~DG~gG~~~a~~~~~~~~~~l~~~~~~~~~---~~~~ 118 (268)
+.++ ..+.+|.+ ..|||++....... ... ...||||||||||..+|+|+.++++..+.+....+.. ...+
T Consensus 39 ~~~~~~~~~~~~r-~~med~~~~~~~~~~~~~~~~~~~~ffgVfDGHGG~~~A~~~~~~L~~~l~~~~~~~~~~~~~~~a 117 (330)
T KOG0698|consen 39 YRLGSLLSIRGRR-RKMEDRHVQLPDFLEEDVGGEQDTAFFGVFDGHGGDLAAKFAAKHLHKNLLEQLAFPKDRQDVKDA 117 (330)
T ss_pred ccceEEEecCCCC-CccCcceeecccccccccCCCCceEEEEEEeCCCCHHHHHHHHHHHHHHHHhhhhcccchHHHHHH
Confidence 4444 55778877 59999998654422 233 6899999999999999999999999999988877653 7899
Q ss_pred HHHHHH-HHhHHHHHhcccCCCCCcceEEEEEEeCCeEEEEEcCCceeEEEecC-cccccCCCCCChH--HHHHHHHcCC
Q 024364 119 ITNAYR-STDQFILENSMQLGPGGSTAVTAIVIDGKDLWVANVGDSRAVVCERG-SANQITVDHEPHA--ERRRIEKQGG 194 (268)
Q Consensus 119 l~~~~~-~~~~~i~~~~~~~~~~~~tt~~~~~i~~~~l~~anvGDSr~~l~~~g-~~~~lt~dH~~~~--E~~ri~~~gg 194 (268)
++++|. +++..+..........|+|++++++..+.++|+||+||||+++++.| ...+||.||.+.. |+.||.++||
T Consensus 118 ~~~~F~~~~D~~~~~~~~~~~~~gstav~~vi~~~~~l~vaN~GDSRaVl~~~~~~a~~Ls~DHkP~~~~E~~RI~~~GG 197 (330)
T KOG0698|consen 118 LRRAFLTKTDSEFLEKREDNRSGGSTAVVALIKKGRKLYVANVGDSRAVLSRKGGVAVQLSVDHKPDREDERERIEAAGG 197 (330)
T ss_pred HHHHHHHHHHHHHHhhccCCCCCcceeeeeeEecCCEEEEEEcCCCcEEEecCCCeeeeCCCCCCCCcHHHHHHHHHcCC
Confidence 999999 69999987622223455666666555566999999999999999865 7999999999966 9999999999
Q ss_pred eEEeCCCCCCcccCceeeeeccCCcccc-CCccccceEEEEEeCCCCeEEEEecCCccCCCCHHHHHHhhcC
Q 024364 195 FVTSLPGDVPRVNGQLAVARAFGDQSLK-AHLSSEPDVRHVPIDPSIEFLILASDGLWKVSCYRSIWTSLCH 265 (268)
Q Consensus 195 ~~~~~~~~~~~~~~~~~ltr~lG~~~~k-~~v~~~p~i~~~~l~~~d~~liL~SDGl~d~l~~~ei~~il~~ 265 (268)
++..... .+|++|.++++|+|||..+| +.|+++|++....+...|+||||+||||||+++++|++++++.
T Consensus 198 ~v~~~~~-~~Rv~G~LavsRa~GD~~~k~~~v~a~Pei~~~~~~~~deFLiLasDGiwDv~s~qeav~~V~~ 268 (330)
T KOG0698|consen 198 RVSNWGG-VWRVNGVLAVSRAFGDVELKSQGVIAEPEIQQVKINSDDEFLILASDGIWDVVSNQEAVDLVRD 268 (330)
T ss_pred EEEEcCC-cceEeceEEEeeecCCHHhcCCcEecCCceEEEEcCCCCcEEEEeCCchhcccChHHHHHHHHH
Confidence 9986333 57999999999999999999 7899999999999999889999999999999999999999875
No 5
>PTZ00224 protein phosphatase 2C; Provisional
Probab=100.00 E-value=1.2e-39 Score=290.77 Aligned_cols=216 Identities=31% Similarity=0.467 Sum_probs=173.3
Q ss_pred CCCCCCCccccCCCCceeEEEEecccCCCCCCCceeeeeecccCCceeEEEEEEcCCCCCchhHHHHHHHHHHHHhccCC
Q 024364 32 SSSDTGKGRSKSSSNKVSHGYHLVEGQSGHDMEDYLVAEYRKKKNHVLGLFAIFDGHLGDRVPTYLKDNLFNNILEESNF 111 (268)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~s~~G~r~~~neD~~~~~~~~~~~~~~~l~~V~DG~gG~~~a~~~~~~~~~~l~~~~~~ 111 (268)
+.|..+..+.......+.+++.+++|.| ..|||++++.. ..+..+|+|||||||+++|+++++.+...+.+....
T Consensus 6 ~~p~~~~~~~~~~~~~~~~g~~s~~G~R-~~nED~~~v~~----~~~~~lfgVfDGHgG~~~S~~~~~~l~~~l~~~~~~ 80 (381)
T PTZ00224 6 PKPVLSKLVDRAGNSIFRCASACVNGYR-ESMEDAHLLYL----TDDWGFFGVFDGHVNDECSQYLARAWPQALEKEPEP 80 (381)
T ss_pred CCCccccccccCCCccEEEEEEeCCCCC-CCCCCeeEecc----CCCceEEEEEeCCCcHHHHHHHHHHHHHHHHhcccc
Confidence 3444444444445667999999999997 68999987532 224579999999999999999999998776543221
Q ss_pred CcCHHHHHHHHHHHHhHHHHHhcccCCCCCcceEEEEEE-eCCeEEEEEcCCceeEEEecCcccccCCCCCChH--HHHH
Q 024364 112 WKDPKAAITNAYRSTDQFILENSMQLGPGGSTAVTAIVI-DGKDLWVANVGDSRAVVCERGSANQITVDHEPHA--ERRR 188 (268)
Q Consensus 112 ~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~tt~~~~~i-~~~~l~~anvGDSr~~l~~~g~~~~lt~dH~~~~--E~~r 188 (268)
...+.|+.++..+|+.+..... .+|||++++++ .++++|++||||||+|++++|++.+||+||++.+ |+.|
T Consensus 81 --~~~~~l~~a~~~~d~~i~~~~~----~~GsTatv~lI~~~~~l~vaNVGDSRayl~r~g~~~~LT~DH~~~~~~E~~R 154 (381)
T PTZ00224 81 --MTDERMEELCLEIDEEWMDSGR----EGGSTGTFCVIMKDVHLQVGNVGDSRVLVCRDGKLVFATEDHKPNNPGERQR 154 (381)
T ss_pred --ccHHHHHHHHHHHHHHHHhccc----CCCCeEEEEEEEECCEEEEEEcccceEEEEECCEEEEcccCCCCCCHHHHhH
Confidence 1245689999999999986543 23455554444 4679999999999999999999999999999987 8899
Q ss_pred HHHcCCeEEeCCCCCCcccCceeeeeccCCccccC---------CccccceEEEEEeCCCCeEEEEecCCccC-CCCHHH
Q 024364 189 IEKQGGFVTSLPGDVPRVNGQLAVARAFGDQSLKA---------HLSSEPDVRHVPIDPSIEFLILASDGLWK-VSCYRS 258 (268)
Q Consensus 189 i~~~gg~~~~~~~~~~~~~~~~~ltr~lG~~~~k~---------~v~~~p~i~~~~l~~~d~~liL~SDGl~d-~l~~~e 258 (268)
|.+.||.+.. .+.+|.+.+||+||+..+|. .|+++|++..+++.++ ++|||||||||| .++++|
T Consensus 155 I~~~gg~v~~-----~Rv~G~l~vTRalGd~~~K~~~~~~~~~~~v~~~Pdi~~~~l~~~-D~llLaSDGL~d~~ls~eE 228 (381)
T PTZ00224 155 IEACGGRVVS-----NRVDGDLAVSRAFGDRSFKVKGTGDYLEQKVIAVPDVTHLTCQSN-DFIILACDGVFEGNFSNEE 228 (381)
T ss_pred HHHccCEecc-----ccccCceeeecccCCcccccccccccccCcceeeeEEEEEECCCC-CEEEEECCCcCcCccCHHH
Confidence 9999999873 57788899999999976542 3678999999999977 799999999999 899999
Q ss_pred HHHhhc
Q 024364 259 IWTSLC 264 (268)
Q Consensus 259 i~~il~ 264 (268)
|.+++.
T Consensus 229 i~~iv~ 234 (381)
T PTZ00224 229 VVAFVK 234 (381)
T ss_pred HHHHHH
Confidence 999885
No 6
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-39 Score=278.16 Aligned_cols=208 Identities=28% Similarity=0.357 Sum_probs=172.7
Q ss_pred CCceeEEEEecccCCCCCCCceeeeeecccCCceeEEEEEEcCCCCCchhHHHHHHHHHHHHhccCC---C--cC-HHHH
Q 024364 45 SNKVSHGYHLVEGQSGHDMEDYLVAEYRKKKNHVLGLFAIFDGHLGDRVPTYLKDNLFNNILEESNF---W--KD-PKAA 118 (268)
Q Consensus 45 ~~~~~~~~~s~~G~r~~~neD~~~~~~~~~~~~~~~l~~V~DG~gG~~~a~~~~~~~~~~l~~~~~~---~--~~-~~~~ 118 (268)
...+.+...+..|..|..|||++.+........ ..||+|||||||+++++++++.++..|.+.... . .. ..+.
T Consensus 5 ~~~~~~~~~s~~g~~R~~NeD~~~~~~~~~~~~-~~l~~V~DG~GGh~~ge~aS~~~v~~l~~~~~~~~~~~~~~~~~~~ 83 (262)
T COG0631 5 ILSLKVAGLSDVGTVRKHNEDAFLIKPNENGNL-LLLFAVADGMGGHAAGEVASKLAVEALARLFDETNFNSLNESLEEL 83 (262)
T ss_pred cceeeeeeeccCCCccCCCCcceeeccccCCcc-eeEEEEEeCccchhHHHHHHHHHHHHHHHHHHhccccccchhHHHH
Confidence 455888999999999999999999765443333 679999999999999999999998888765322 1 11 5789
Q ss_pred HHHHHHHHhHHHHHhcc--cCCCCCcceEEEEEEeCCeEEEEEcCCceeEEEecCcccccCCCCCChHHHHHHHHcCCeE
Q 024364 119 ITNAYRSTDQFILENSM--QLGPGGSTAVTAIVIDGKDLWVANVGDSRAVVCERGSANQITVDHEPHAERRRIEKQGGFV 196 (268)
Q Consensus 119 l~~~~~~~~~~i~~~~~--~~~~~~~tt~~~~~i~~~~l~~anvGDSr~~l~~~g~~~~lt~dH~~~~E~~ri~~~gg~~ 196 (268)
|..++..+++.+..... ....++|||++++++.++++|+|||||||+|+++++.++|+|+||++.++. ...+...
T Consensus 84 l~~~~~~~n~~i~~~~~~~~~~~~mgtTl~~~~~~~~~l~~a~vGDSR~yl~~~~~~~~lT~DH~~~~~~---~~~~~~~ 160 (262)
T COG0631 84 LKEAILKANEAIAEEGQLNEDVRGMGTTLVLLLIRGNKLYVANVGDSRAYLLRDGELKQLTEDHSLVNRL---EQRGIIT 160 (262)
T ss_pred HHHHHHHHHHHHHHhhhcccccCCCceeEEEEEEECCeEEEEEccCCeEEEEcCCceEEeccCCcHHHHH---HHhcCCC
Confidence 99999999999998763 444789999999999999999999999999999999999999999998842 2222222
Q ss_pred EeCCCCCCcccCceeeeeccCCccccCCccccceEEEEEeCCCCeEEEEecCCccCCCCHHHHHHhhcC
Q 024364 197 TSLPGDVPRVNGQLAVARAFGDQSLKAHLSSEPDVRHVPIDPSIEFLILASDGLWKVSCYRSIWTSLCH 265 (268)
Q Consensus 197 ~~~~~~~~~~~~~~~ltr~lG~~~~k~~v~~~p~i~~~~l~~~d~~liL~SDGl~d~l~~~ei~~il~~ 265 (268)
......+|+.+ ++||+||+.. ..+|++....++++ +|||||||||||.+++++|.++|..
T Consensus 161 ~~~~~~~~~~~---~ltralG~~~-----~~~p~~~~~~~~~~-d~llL~SDGl~d~v~~~~i~~il~~ 220 (262)
T COG0631 161 PEEARSHPRRN---ALTRALGDFD-----LLEPDITELELEPG-DFLLLCSDGLWDVVSDDEIVDILKN 220 (262)
T ss_pred HHHHHhCccch---hhhhhcCCCc-----ccceeEEEEEcCCC-CEEEEECCCCccCcCHHHHHHHHhc
Confidence 22223345665 9999999999 69999999999999 9999999999999999999999974
No 7
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=6.3e-37 Score=260.91 Aligned_cols=122 Identities=37% Similarity=0.649 Sum_probs=114.9
Q ss_pred CCCcceEEEEEEeCCeEEEEEcCCceeEEEecCcccccCCCCCChH--HHHHHHHcCCeEEeCCCCCCcccCceeeeecc
Q 024364 139 PGGSTAVTAIVIDGKDLWVANVGDSRAVVCERGSANQITVDHEPHA--ERRRIEKQGGFVTSLPGDVPRVNGQLAVARAF 216 (268)
Q Consensus 139 ~~~~tt~~~~~i~~~~l~~anvGDSr~~l~~~g~~~~lt~dH~~~~--E~~ri~~~gg~~~~~~~~~~~~~~~~~ltr~l 216 (268)
..+|||++++++.+.+||+||.||||+++.|+|+.+-++.||.|.. |..||.++||.+.- .+|+||++.|+|+|
T Consensus 328 ~DSGtTAvVcLv~g~~liVANAGDSRcV~sr~GkAvdmS~DHKPEDevE~~RI~~AGG~vtl----DGRVNGGLNLSRA~ 403 (542)
T KOG0699|consen 328 EDSGTTAVVCLVGGDKLIVANAGDSRCVLSRNGKAVDMSVDHKPEDEVETNRIHAAGGQVTL----DGRVNGGLNLSRAF 403 (542)
T ss_pred CCCCceEEEEEecCceEEEecCCCcceEEecCCceeecccCCCcccHHHHHHHHhcCCeEee----cceecCccchhhhh
Confidence 4568999999999999999999999999999999999999999998 89999999999983 48999999999999
Q ss_pred CCccccCC---------ccccceEEEEEeCCCCeEEEEecCCccCCCCHHHHHHhhc
Q 024364 217 GDQSLKAH---------LSSEPDVRHVPIDPSIEFLILASDGLWKVSCYRSIWTSLC 264 (268)
Q Consensus 217 G~~~~k~~---------v~~~p~i~~~~l~~~d~~liL~SDGl~d~l~~~ei~~il~ 264 (268)
|+..||.+ |.+-|+|....|.+.++|+||+|||||++++.+|+++.|+
T Consensus 404 GDHaYK~N~~Lp~eEQMIsALPDiK~l~lTpedEFmVvACDGIWN~MsSqeVVdFvr 460 (542)
T KOG0699|consen 404 GDHAYKKNQELPLEEQMISALPDIKILALTPEDEFMVVACDGIWNSMSSQEVVDFVR 460 (542)
T ss_pred hhhhhhcccCCChHHHHhhhcccceeEeecCcccEEEEEccchhhhccHHHHHHHHH
Confidence 99999964 8899999999999999999999999999999999999875
No 8
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain. The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=4.4e-34 Score=244.27 Aligned_cols=210 Identities=41% Similarity=0.617 Sum_probs=178.0
Q ss_pred ceeEEEEecccCCCCCCCceeeeeecccCCceeEEEEEEcCCCCCchhHHHHHHHHHHHHhccCCC----cCHHHHHHHH
Q 024364 47 KVSHGYHLVEGQSGHDMEDYLVAEYRKKKNHVLGLFAIFDGHLGDRVPTYLKDNLFNNILEESNFW----KDPKAAITNA 122 (268)
Q Consensus 47 ~~~~~~~s~~G~r~~~neD~~~~~~~~~~~~~~~l~~V~DG~gG~~~a~~~~~~~~~~l~~~~~~~----~~~~~~l~~~ 122 (268)
.+.+++.+.+|.| ..|||++++.... ..+..+|+|||||||..+|+++++.+...+.+..... ..+...|+++
T Consensus 5 ~~~~~~~~~~~~r-~~neD~~~~~~~~--~~~~~~~~v~DG~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 81 (255)
T smart00332 5 GLRYGLSSMQGVR-KPMEDAHVITPDL--SDSGAFFGVFDGHGGSEAAKFLSKNLPEILAEELIKHKDELEDVEEALRKA 81 (255)
T ss_pred ceeEEEecCCCCC-CCCcceEEEeccC--CCCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHhHhhcccchhHHHHHHHHH
Confidence 3677887777776 7999998864331 2467899999999999999999999998887664333 2478889999
Q ss_pred HHHHhHHHHHhcccC--CCCCcceEEEEEEeCCeEEEEEcCCceeEEEecCcccccCCCCCChH--HHHHHHHcCCeEEe
Q 024364 123 YRSTDQFILENSMQL--GPGGSTAVTAIVIDGKDLWVANVGDSRAVVCERGSANQITVDHEPHA--ERRRIEKQGGFVTS 198 (268)
Q Consensus 123 ~~~~~~~i~~~~~~~--~~~~~tt~~~~~i~~~~l~~anvGDSr~~l~~~g~~~~lt~dH~~~~--E~~ri~~~gg~~~~ 198 (268)
+.++++.+....... ...++||++++++..+.+|++|+||||+|+++++++.++|.||++.+ |..||...++.+..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~y~~~~~~~~~lt~dh~~~~~~~~~~i~~~~~~~~~ 161 (255)
T smart00332 82 FLKTDEEILEELESLEEDAGSGSTAVVALISGNKLYVANVGDSRAVLCRNGKAVQLTEDHKPSNEDERARIEAAGGFVIN 161 (255)
T ss_pred HHHHHHHHHHhhhhccCCCCCCccEEEEEEECCEEEEEeccCceEEEEeCCceeEcCCCCCCcCHHHHHHHHHcCCEEEC
Confidence 999999998766443 25689999999999999999999999999999999999999999976 88999999888763
Q ss_pred CCCCCCcccCceeeeeccCCccccCCccccceEEEEEe-CCCCeEEEEecCCccCCCCHHHHHHhhcC
Q 024364 199 LPGDVPRVNGQLAVARAFGDQSLKAHLSSEPDVRHVPI-DPSIEFLILASDGLWKVSCYRSIWTSLCH 265 (268)
Q Consensus 199 ~~~~~~~~~~~~~ltr~lG~~~~k~~v~~~p~i~~~~l-~~~d~~liL~SDGl~d~l~~~ei~~il~~ 265 (268)
.+.++.+.+||++|...+|+.+..+|++...++ .++ ++|||||||||+++++++|.+++..
T Consensus 162 -----~~~~~~~~lt~~~g~~~~~~~i~~~p~~~~~~~~~~~-d~ill~SDGv~~~l~~~~i~~~~~~ 223 (255)
T smart00332 162 -----GRVNGVLALSRAIGDFFLKPYVSAEPDVTVVELTEKD-DFLILASDGLWDVLSNQEVVDIVRK 223 (255)
T ss_pred -----CeECCeEecccccCCHhhcCCeEeeeEEEEEEecCCC-cEEEEECCccccCCCHHHHHHHHHH
Confidence 355666799999999999988999999999997 555 8999999999999999999998854
No 9
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=5.6e-34 Score=243.10 Aligned_cols=210 Identities=40% Similarity=0.578 Sum_probs=175.4
Q ss_pred eeEEEEecccCCCCCCCceeeeeecccCCceeEEEEEEcCCCCCchhHHHHHHHHHHHHhccCC-----CcCHHHHHHHH
Q 024364 48 VSHGYHLVEGQSGHDMEDYLVAEYRKKKNHVLGLFAIFDGHLGDRVPTYLKDNLFNNILEESNF-----WKDPKAAITNA 122 (268)
Q Consensus 48 ~~~~~~s~~G~r~~~neD~~~~~~~~~~~~~~~l~~V~DG~gG~~~a~~~~~~~~~~l~~~~~~-----~~~~~~~l~~~ 122 (268)
+.+++.+..|.| ..|||++++...... .+..+|+|||||||+..++++++.+...+.+.... ...+...|+.+
T Consensus 1 ~~~~~~~~~g~r-~~neD~~~~~~~~~~-~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~~~l~~~ 78 (254)
T cd00143 1 FSAGVSDKGGDR-KTNEDAVVIKPNLNN-EDGGLFGVFDGHGGHAAGEFASKLLVEELLEELEETLTLSEEDIEEALRKA 78 (254)
T ss_pred CceeeecCCCCC-CCCcceEEEeccCCC-CCcEEEEEEcCCChHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHH
Confidence 356778888887 599999986433210 25689999999999999999999998888765432 24567889999
Q ss_pred HHHHhHHHHHhccc--CCCCCcceEEEEEEeCCeEEEEEcCCceeEEEecCcccccCCCCCChH--HHHHHHHcCCeEEe
Q 024364 123 YRSTDQFILENSMQ--LGPGGSTAVTAIVIDGKDLWVANVGDSRAVVCERGSANQITVDHEPHA--ERRRIEKQGGFVTS 198 (268)
Q Consensus 123 ~~~~~~~i~~~~~~--~~~~~~tt~~~~~i~~~~l~~anvGDSr~~l~~~g~~~~lt~dH~~~~--E~~ri~~~gg~~~~ 198 (268)
|.++++.+...... ....++||++++++..+.++++|+||||+|++++++++++|.||++.+ |..|+...++++.
T Consensus 79 ~~~~~~~l~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~~~~~~~~~~~lt~dh~~~~~~~~~~i~~~~~~~~- 157 (254)
T cd00143 79 FLRADEEILEEAQDEPDDARSGTTAVVALIRGNKLYVANVGDSRAVLCRNGEAVQLTKDHKPVNEEERERIEKAGGRVS- 157 (254)
T ss_pred HHHHHHHHHHhhhhccCCCCCCCcEEEEEEECCEEEEEEecCcEEEEEcCCceeEcCCCCCCcChHHHHHHHHcCCcEE-
Confidence 99999999876542 345678999999999999999999999999999999999999999986 8899999888765
Q ss_pred CCCCCCcccCceeeeeccCCccccCCccccceEEEEEe-CCCCeEEEEecCCccCCCCHHHHHHhhcC
Q 024364 199 LPGDVPRVNGQLAVARAFGDQSLKAHLSSEPDVRHVPI-DPSIEFLILASDGLWKVSCYRSIWTSLCH 265 (268)
Q Consensus 199 ~~~~~~~~~~~~~ltr~lG~~~~k~~v~~~p~i~~~~l-~~~d~~liL~SDGl~d~l~~~ei~~il~~ 265 (268)
..+.++++.+||++|...+|+.+..+|++...++ .++ ++|||||||||+++++++|.+++..
T Consensus 158 ----~~~~~~~~~~t~~lG~~~~~~~~~~~~~~~~~~l~~~~-d~ill~SDG~~~~l~~~~i~~~~~~ 220 (254)
T cd00143 158 ----NGRVPGVLAVTRALGDFDLKPGVSAEPDVTVVKLTEDD-DFLILASDGLWDVLSNQEAVDIVRS 220 (254)
T ss_pred ----eCEEcCceeeccccCCccccCCEEcCCeEEEEEeCCCC-cEEEEECCCCeeccChHHHHHHHHH
Confidence 2455566799999999988877789999999999 665 8899999999999999999998864
No 10
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=5e-34 Score=248.15 Aligned_cols=201 Identities=34% Similarity=0.469 Sum_probs=158.3
Q ss_pred CCCceeeeeecccCCceeEEEEEEcCCCCCchhHHHHHHHHHHHHhcc-------------C------------------
Q 024364 62 DMEDYLVAEYRKKKNHVLGLFAIFDGHLGDRVPTYLKDNLFNNILEES-------------N------------------ 110 (268)
Q Consensus 62 ~neD~~~~~~~~~~~~~~~l~~V~DG~gG~~~a~~~~~~~~~~l~~~~-------------~------------------ 110 (268)
.-||++-+... .+.++.|+||||||||.++++++.++++.++..+. +
T Consensus 84 ~~edrv~~~~s--~~~~~~fvGIyDGhgGp~as~~v~~~L~~~v~~~L~~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~ 161 (390)
T KOG0700|consen 84 AEEDRVSVAVS--EENGWLFVGIYDGHGGPDASRFLSDHLYPYVARELQGLLWQDEERFPSEYKSEELEHLLVYWKQLSS 161 (390)
T ss_pred cccCcceeeee--ccCCeEEEEEecCCCCccHHHHHHHHHHHHHHHHhhhhhhhhccccccccccchhhhhhhhhhcccc
Confidence 34555543222 25688999999999999999999999998876211 1
Q ss_pred --C-CcCHHHHHHHHHHHHhHHHHHhc-------ccCCCCCcceEEEEEEeCCeEEEEEcCCceeEEEe---cC---ccc
Q 024364 111 --F-WKDPKAAITNAYRSTDQFILENS-------MQLGPGGSTAVTAIVIDGKDLWVANVGDSRAVVCE---RG---SAN 174 (268)
Q Consensus 111 --~-~~~~~~~l~~~~~~~~~~i~~~~-------~~~~~~~~tt~~~~~i~~~~l~~anvGDSr~~l~~---~g---~~~ 174 (268)
. ...+.++|.+||.++++.+.... ... ..+|+++++.++.+..+|+||+||||++|.+ ++ ...
T Consensus 162 ~~~~~~~v~~al~~Af~~tee~fl~~v~~~~~~~p~l-A~~GSC~Lv~~i~~~~LyVaN~GDSRAVLG~~~~~~~~~~A~ 240 (390)
T KOG0700|consen 162 ADQRHGDVLEALSKAFEATEEDFLEMVDKQLQENPEL-ALVGSCCLVGLIKGGDLYVANVGDSRAVLGVVENNGSWLVAV 240 (390)
T ss_pred cCccchhHHHHHHHHHHHHHHHHHHHHHHhhccchhh-hhhcceEEEEEEeCCeEEEEecCcchhhhceecCCCCeEEEE
Confidence 1 35678999999999999997544 222 2334444455888999999999999999965 33 468
Q ss_pred ccCCCCCChH--HHHHHHHcCCeEE-eCCCCCCcccCceeeeeccCCcccc---------------------CCccccce
Q 024364 175 QITVDHEPHA--ERRRIEKQGGFVT-SLPGDVPRVNGQLAVARAFGDQSLK---------------------AHLSSEPD 230 (268)
Q Consensus 175 ~lt~dH~~~~--E~~ri~~~gg~~~-~~~~~~~~~~~~~~ltr~lG~~~~k---------------------~~v~~~p~ 230 (268)
|||.||+..+ |++||+..+-.-. ..-..+.|+.|.+.+||+|||..+| |++.++|+
T Consensus 241 qLS~dHn~~ne~Ev~Rir~eHPdd~~~vv~~~~RvkG~L~vsRAfGd~~lK~~~~n~e~l~~~fr~~~~~t~PyltaeP~ 320 (390)
T KOG0700|consen 241 QLSTDHNASNEDEVRRIRSEHPDDPHIVVNKHWRVKGILQVSRAFGDGYLKWPEFNQEPLLEKFRIPYIGTPPYLTAEPS 320 (390)
T ss_pred ecChhhccccHHHHHHHHHhCCCCcceEeeccceeeEEEEeeeeccceeecchhhccchhHhhcCCCCCCCCCceeccce
Confidence 9999999998 8999988753111 0111236899999999999999988 45999999
Q ss_pred EEEEEeCCCCeEEEEecCCccCCCCHHHHHHhhcC
Q 024364 231 VRHVPIDPSIEFLILASDGLWKVSCYRSIWTSLCH 265 (268)
Q Consensus 231 i~~~~l~~~d~~liL~SDGl~d~l~~~ei~~il~~ 265 (268)
+..++|.+.|.||||+|||||++|+++|++++|.+
T Consensus 321 i~~HrL~p~DkFLIlASDGLwE~lsNeeaV~lV~~ 355 (390)
T KOG0700|consen 321 ITHHKLTPNDKFLILASDGLWEYLSNEEAVSLVHE 355 (390)
T ss_pred EEEEEcCCCCeEEEEeccchhhhcChHHHHHHHHH
Confidence 99999999999999999999999999999999865
No 11
>PRK14559 putative protein serine/threonine phosphatase; Provisional
Probab=100.00 E-value=4.4e-33 Score=261.63 Aligned_cols=210 Identities=20% Similarity=0.254 Sum_probs=151.6
Q ss_pred CCceeEEEEecccCCCCCCCceeeeeecc-----cCC---ceeEEEEEEcCCCCCchhHHHHHHHHHHH----HhccCCC
Q 024364 45 SNKVSHGYHLVEGQSGHDMEDYLVAEYRK-----KKN---HVLGLFAIFDGHLGDRVPTYLKDNLFNNI----LEESNFW 112 (268)
Q Consensus 45 ~~~~~~~~~s~~G~r~~~neD~~~~~~~~-----~~~---~~~~l~~V~DG~gG~~~a~~~~~~~~~~l----~~~~~~~ 112 (268)
...++++..|++|.+|+.|||++.+.... ... ....+|+|||||||+.+++.|++.+.+.+ .+.....
T Consensus 372 l~~l~~a~~Td~G~~R~~NEDa~~i~~~~~~~~~~~~~~~~~~~L~aVaDGmGGh~~GevAS~lAv~~L~~~~~~~~~~~ 451 (645)
T PRK14559 372 LVSLEDAGRTDVGRQRHHNEDYFGINTRIQKLENPHGRIVQARGLYILCDGMGGHAAGEVASALAVETLQQYFQQHWQDE 451 (645)
T ss_pred ceeEEEEEECCCCCCCcccCCcccccccccccccccccccccceEEEEEeCCCCchhHHHHHHHHHHHHHHHHHhhhccc
Confidence 34588999999999778999998653211 000 13568999999999886665555444443 3222211
Q ss_pred cCHHHHHHHHHHHHhHHHHHhccc----CCCCCcceEEEEEEeCCeEEEEEcCCceeEEE-ecCcccccCCCCCChHHHH
Q 024364 113 KDPKAAITNAYRSTDQFILENSMQ----LGPGGSTAVTAIVIDGKDLWVANVGDSRAVVC-ERGSANQITVDHEPHAERR 187 (268)
Q Consensus 113 ~~~~~~l~~~~~~~~~~i~~~~~~----~~~~~~tt~~~~~i~~~~l~~anvGDSr~~l~-~~g~~~~lt~dH~~~~E~~ 187 (268)
....+.|+++|..+|+.|.+.... ....+|||++++++.++++|++||||||+|++ ++|++.++|+||++.++
T Consensus 452 ~~~~~~L~~ai~~AN~~I~~~~~~~~~~~~~~MGTTlv~alI~~~~l~ianVGDSRaYli~r~g~l~QLT~DHs~~~~-- 529 (645)
T PRK14559 452 LPDEETIREAIYLANEAIYDLNQQNARSGSGRMGTTLVMALVQDTQVAVAHVGDSRLYRVTRKGGLEQLTVDHEVGQR-- 529 (645)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCceeeeEEEECCEEEEEEecCceEEEEecCCeEEEeCCCCCHHHH--
Confidence 224677999999999999875422 23468999999999999999999999999998 47899999999998874
Q ss_pred HHHHcCCeEEeCCCCCCcccCceeeeeccCCccccCCccccceEEEEEeCCCCeEEEEecCCccC--CCCH---HHHHHh
Q 024364 188 RIEKQGGFVTSLPGDVPRVNGQLAVARAFGDQSLKAHLSSEPDVRHVPIDPSIEFLILASDGLWK--VSCY---RSIWTS 262 (268)
Q Consensus 188 ri~~~gg~~~~~~~~~~~~~~~~~ltr~lG~~~~k~~v~~~p~i~~~~l~~~d~~liL~SDGl~d--~l~~---~ei~~i 262 (268)
+++.| ...... ..+.+++.|||+||+...+ ..+|++..+.+.++ ++|||||||||| .+.. +++..+
T Consensus 530 -lv~~G-i~~~~a---~~~p~~~~LTrALG~~~~~---~l~Pdi~~~~L~~g-D~lLLCSDGL~D~~~ve~~~~~~l~~i 600 (645)
T PRK14559 530 -EIQRG-VEPQIA---YARPDAYQLTQALGPRDNS---AIQPDIQFLEIEED-TLLLLCSDGLSDNDLLETHWQTHLLPL 600 (645)
T ss_pred -HHHhC-CCHHHH---hcCcccceeeeccCCCCCC---cccceEEEEEcCCC-CEEEEECCCCCCCcccchHHHHHHHHH
Confidence 34444 221111 1234566999999987643 46899999999887 888899999999 4554 345555
Q ss_pred hcC
Q 024364 263 LCH 265 (268)
Q Consensus 263 l~~ 265 (268)
+..
T Consensus 601 l~~ 603 (645)
T PRK14559 601 LSS 603 (645)
T ss_pred Hhc
Confidence 543
No 12
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms]
Probab=99.92 E-value=8.2e-25 Score=185.28 Aligned_cols=191 Identities=28% Similarity=0.436 Sum_probs=147.6
Q ss_pred CceeEEEEEEcCCCCCchhHHHHHHHHHHHHhccC-------------------------C---------------CcCH
Q 024364 76 NHVLGLFAIFDGHLGDRVPTYLKDNLFNNILEESN-------------------------F---------------WKDP 115 (268)
Q Consensus 76 ~~~~~l~~V~DG~gG~~~a~~~~~~~~~~l~~~~~-------------------------~---------------~~~~ 115 (268)
..+..+|-+||||.|..+|-.+++.+.+.+.+... + ..-+
T Consensus 141 ~~~~~~~slfdghags~~avvAsrll~~hI~~ql~~vvd~i~~~~~~~~~~~g~~~~~s~~s~~~~~~~~ek~Ir~E~LV 220 (493)
T KOG1323|consen 141 RADGALFSLFDGHAGSAVAVVASRLLHRHIKEQLCEVVDTILHMDRHENLNFGKHRSESSYSMSEMSREDEKRIRHEHLV 220 (493)
T ss_pred CCcceeeeeecCCCcchHHHHHHHHHHHhhhHHHHHHHHHHhhhccccccccccccccCCcccccccchhhccCchHHhh
Confidence 34678999999999999888887776655533210 0 0124
Q ss_pred HHHHHHHHHHHhHHHHHhcccCCCCCcceEEEEEEeCCeEEEEEcCCceeEEEecCcccccCCCCCChHHHHHHHHcC--
Q 024364 116 KAAITNAYRSTDQFILENSMQLGPGGSTAVTAIVIDGKDLWVANVGDSRAVVCERGSANQITVDHEPHAERRRIEKQG-- 193 (268)
Q Consensus 116 ~~~l~~~~~~~~~~i~~~~~~~~~~~~tt~~~~~i~~~~l~~anvGDSr~~l~~~g~~~~lt~dH~~~~E~~ri~~~g-- 193 (268)
..+|+.+|++.++.|-.........||||+++++.--+++|++|.||||++++|++.++.++++-++..|++||+..+
T Consensus 221 iGAlEsAFqemDeqiarer~~~~~~GGCtalvvi~llGKlYvaNAGDsRAIlVrndeirplS~efTPetERqRlQ~Laf~ 300 (493)
T KOG1323|consen 221 IGALESAFQEMDEQIARERQVWRLPGGCTALVVIVLLGKLYVANAGDSRAILVRNDEIRPLSKEFTPETERQRLQELAFR 300 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCceEEEeeeeccceEEccCCCceEEEEecCCeeecccccCcHHHHHHHHHHhhc
Confidence 678999999999999887766666777777776777789999999999999999999999999999999999997763
Q ss_pred ------CeEEeC--C----------------------------------------CCCCcccCceeeeeccCCcccc---
Q 024364 194 ------GFVTSL--P----------------------------------------GDVPRVNGQLAVARAFGDQSLK--- 222 (268)
Q Consensus 194 ------g~~~~~--~----------------------------------------~~~~~~~~~~~ltr~lG~~~~k--- 222 (268)
+..... + +...|.-+.+.+||-|||..+|
T Consensus 301 ~PeLlgneFtrLEfprRl~~~dLgqrvLyRD~~MtGWayKtve~~DLr~pLI~gegrkaRll~TigVsRGlGDH~Lkv~d 380 (493)
T KOG1323|consen 301 NPELLGNEFTRLEFPRRLTIKDLGQRVLYRDWNMTGWAYKTVEEEDLRFPLISGEGRKARLLATIGVSRGLGDHHLKVVD 380 (493)
T ss_pred ChHhhcccccceecccccChhhhcceeeeeccccccceeehhhhhcCCcceecccchhhhhhhhheeccccCcceeeeec
Confidence 111110 0 1111223467899999998765
Q ss_pred ------CCccccceEEEEEeCC----CCeEEEEecCCccCCCCHHHHHHhhcCC
Q 024364 223 ------AHLSSEPDVRHVPIDP----SIEFLILASDGLWKVSCYRSIWTSLCHP 266 (268)
Q Consensus 223 ------~~v~~~p~i~~~~l~~----~d~~liL~SDGl~d~l~~~ei~~il~~~ 266 (268)
|.+.+.|++....+.+ .|+.+||+||||||+++++|+..+|.+.
T Consensus 381 snl~iKPFLssvPeV~V~dl~q~e~~~DdVvilatDGLWDVlSneeva~~Vrs~ 434 (493)
T KOG1323|consen 381 SNLSIKPFLSSVPEVRVYDLRQYEHLTDDVVILATDGLWDVLSNEEVALIVRSF 434 (493)
T ss_pred CCcccchhhhcCCeeEEEehhhhccCCCcEEEEecCchhhhcccHHHHHHHHHh
Confidence 4588999999998872 3689999999999999999999988654
No 13
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B ....
Probab=99.85 E-value=9.4e-21 Score=157.86 Aligned_cols=177 Identities=19% Similarity=0.206 Sum_probs=96.0
Q ss_pred EecccCCCCCCCceeeeeecccCCceeEEEEEEcCCCCCchhHHHHHHHHHHHH----hccCCCcC--HHHHHHHHHHHH
Q 024364 53 HLVEGQSGHDMEDYLVAEYRKKKNHVLGLFAIFDGHLGDRVPTYLKDNLFNNIL----EESNFWKD--PKAAITNAYRST 126 (268)
Q Consensus 53 ~s~~G~r~~~neD~~~~~~~~~~~~~~~l~~V~DG~gG~~~a~~~~~~~~~~l~----~~~~~~~~--~~~~l~~~~~~~ 126 (268)
.+++|.+ ..|||++.+... .+..+++||||+||...+..++..+...+. ........ ....++.+..++
T Consensus 3 ~sh~~~~-~~nqD~~~~~~~----~~~~~~aVaDG~g~~~~~~~aa~~av~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 77 (212)
T PF13672_consen 3 RSHRGRG-APNQDAFGIRTD----DDGNLAAVADGVGGSPYGEEAAQLAVETFINYLKKLLSQESPSSIEALIRAIKKEI 77 (212)
T ss_dssp ----TTS-SS--EEEEEE-T----CCTCEEEEEEEESTTTHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHH
T ss_pred ccccCCC-CCCCCCEEeeeC----CCCEEEEEEECCCCCchhHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHH
Confidence 3567777 699999984333 244677999999987766665555554443 33322211 122233333333
Q ss_pred hHHH-----HHhcccCCCCCcceEEEEEEeCCeEEEEEcCCceeEE-EecCcccccCCCCCChHHHHHHHHcCCeEEeCC
Q 024364 127 DQFI-----LENSMQLGPGGSTAVTAIVIDGKDLWVANVGDSRAVV-CERGSANQITVDHEPHAERRRIEKQGGFVTSLP 200 (268)
Q Consensus 127 ~~~i-----~~~~~~~~~~~~tt~~~~~i~~~~l~~anvGDSr~~l-~~~g~~~~lt~dH~~~~E~~ri~~~gg~~~~~~ 200 (268)
...+ ..........++||++++++.++.++++|+||||+|+ .++|.+.+++.+|+.... .
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~tTl~~~v~~~~~~~~~~iGD~~i~~~~~~g~~~~l~~~~~~~~~--~------------ 143 (212)
T PF13672_consen 78 LSIVRAFQSAKQADLELRDYGTTLLALVIDPDKVYIFNIGDSRIYVIRRNGEIQQLTDDHSGEYP--N------------ 143 (212)
T ss_dssp HHHH----HHHHHSGGGTT-EE-EEEEEEETTEEEEEEESS-EEEEEEETTEEEE-S---BHHHH--H------------
T ss_pred HHHhhhhhhhhhccccccccCceEEEEEEECCEEEEEEECCCeEEEEECCCEEEEcCCCccchhh--h------------
Confidence 3221 1112334467799999999999999999999999975 579999999999972211 0
Q ss_pred CCCCcccCceeeeeccCCccccCCccccceEEEEEeCCCCeEEEEecCCccCCCCHHH-HHHhhc
Q 024364 201 GDVPRVNGQLAVARAFGDQSLKAHLSSEPDVRHVPIDPSIEFLILASDGLWKVSCYRS-IWTSLC 264 (268)
Q Consensus 201 ~~~~~~~~~~~ltr~lG~~~~k~~v~~~p~i~~~~l~~~d~~liL~SDGl~d~l~~~e-i~~il~ 264 (268)
. ++.+..... ....++..+++.++ +.|+|||||||+.+...+ +..++.
T Consensus 144 ----------~-~~~~~~~~~----~~~~~~~~~~~~~~-d~ilL~SDG~~~~l~~~~~~~~~l~ 192 (212)
T PF13672_consen 144 ----------Q-TRSLTGDDP----EPDVQYGSIPLEEG-DVILLCSDGVWDNLRSYEDLEQFLK 192 (212)
T ss_dssp ----------C-TTSCCHHCC----CTETEEEEEE--TT--EEEEE-HHHHTTS-HHHHHHHH--
T ss_pred ----------h-hhccCcccc----ccCCeEEEEEcCCC-CEEEEECcCccccCCCHHHHHHHhh
Confidence 1 222222110 23346677777778 777799999999998655 666664
No 14
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.83 E-value=2.3e-19 Score=151.97 Aligned_cols=166 Identities=21% Similarity=0.231 Sum_probs=112.0
Q ss_pred CCCCceeeeeecccCCceeEEEEEEcCCCCCc--------hhHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHhHHHHH
Q 024364 61 HDMEDYLVAEYRKKKNHVLGLFAIFDGHLGDR--------VPTYLKDNLFNNILEESNFWKDPKAAITNAYRSTDQFILE 132 (268)
Q Consensus 61 ~~neD~~~~~~~~~~~~~~~l~~V~DG~gG~~--------~a~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~i~~ 132 (268)
..-||++++... ....+.|||||+|||. .++.+.+..-..+.+......++...|..++.++-+
T Consensus 89 ~~GEDa~Fvss~----~~~~v~GVADGVGGWa~~GiDpg~fS~eLM~~ce~~v~~~~~~~~~P~~lL~~ay~~l~~---- 160 (330)
T KOG1379|consen 89 KGGEDAWFVSSN----PHAIVMGVADGVGGWAEYGIDPGAFSRELMSNCERLVQNSDFNPSDPVNLLEKAYAELKS---- 160 (330)
T ss_pred CCCCcceeeccC----cccceEEEccccchHhhcCcCHHHHHHHHHHHHHHHhcccccCCCChHHHHHHHHHHHhh----
Confidence 367999986432 3667999999999853 334444443333333334445788888887766432
Q ss_pred hcccCCCCCcceEEEEEEe--CCeEEEEEcCCceeEEEecCcccccCCCCCChHHHHHHHHcCCeEEeCCCCCCcccCce
Q 024364 133 NSMQLGPGGSTAVTAIVID--GKDLWVANVGDSRAVVCERGSANQITVDHEPHAERRRIEKQGGFVTSLPGDVPRVNGQL 210 (268)
Q Consensus 133 ~~~~~~~~~~tt~~~~~i~--~~~l~~anvGDSr~~l~~~g~~~~lt~dH~~~~E~~ri~~~gg~~~~~~~~~~~~~~~~ 210 (268)
.. ...-|++|++++++. +++||++|+|||-..++|+|++.+-|..+... +-. -+
T Consensus 161 ~~--~~~vGSSTAcI~~l~~~~~~Lh~aNLGDSGF~VvR~G~vv~~S~~Q~H~-----------FN~-----------Py 216 (330)
T KOG1379|consen 161 QK--VPIVGSSTACILALDRENGKLHTANLGDSGFLVVREGKVVFRSPEQQHY-----------FNT-----------PY 216 (330)
T ss_pred cC--CCCCCcceeeeeeeecCCCeEEEeeccCcceEEEECCEEEEcCchheec-----------cCC-----------ce
Confidence 21 112355555555665 78999999999999999999999888765422 110 01
Q ss_pred eee-------eccCCccccCCccccceEEEEEeCCCCeEEEEecCCccCCCCHHHHHHhhcC
Q 024364 211 AVA-------RAFGDQSLKAHLSSEPDVRHVPIDPSIEFLILASDGLWKVSCYRSIWTSLCH 265 (268)
Q Consensus 211 ~lt-------r~lG~~~~k~~v~~~p~i~~~~l~~~d~~liL~SDGl~d~l~~~ei~~il~~ 265 (268)
+|+ .++++.. -..+...+++.++ |.|||+||||||+|.+++|.++|..
T Consensus 217 QLs~~p~~~~~~~~d~p------~~ad~~~~~v~~G-DvIilATDGlfDNl~e~~Il~il~~ 271 (330)
T KOG1379|consen 217 QLSSPPEGYSSYISDVP------DSADVTSFDVQKG-DVIILATDGLFDNLPEKEILSILKG 271 (330)
T ss_pred eeccCCccccccccCCc------cccceEEEeccCC-CEEEEecccccccccHHHHHHHHHH
Confidence 222 1233322 3456788999999 8899999999999999999999854
No 15
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.81 E-value=2.6e-19 Score=169.51 Aligned_cols=228 Identities=24% Similarity=0.306 Sum_probs=182.7
Q ss_pred cccCCCCCCCCCccccCCCCceeEEEEecccCCCCCCCceeeeeecccCCceeEEEEEEcCCCCCchhHHHHHHHHHHHH
Q 024364 27 TCFSSSSSDTGKGRSKSSSNKVSHGYHLVEGQSGHDMEDYLVAEYRKKKNHVLGLFAIFDGHLGDRVPTYLKDNLFNNIL 106 (268)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~G~r~~~neD~~~~~~~~~~~~~~~l~~V~DG~gG~~~a~~~~~~~~~~l~ 106 (268)
.+...++. ..+........|+||++...|.|. .+--+.+ .+.+........||.+||-+..+..+.+...+...+.
T Consensus 503 ~~~~i~~~--~~~d~~~n~~~~t~Gv~~~~gqrn-k~c~~~~-~v~nf~~~~~a~~g~~dgs~n~~v~~~vq~~ma~~L~ 578 (1081)
T KOG0618|consen 503 SQMDITLN--NTPDGNVNAFLWTYGVAGVSGQRN-KVCSRAV-WVENFFLNPQATFGCFDGSRNSRVLSLVQDTMASYLA 578 (1081)
T ss_pred hheecccC--CCCccccceeheeeccchhccccc-chhhhhh-hhhhcccCCcceEEEEcCCCchhHHHHHHHHHHHHHH
Confidence 44444444 233334445668999999999995 4443333 2333334566899999999999999999999999999
Q ss_pred hccCCCcCHHHHHHHHHHHHhHHHHHhcccCCCCCcceEEEEEEeC--------CeEEEEEcCCceeEEEecCcccccCC
Q 024364 107 EESNFWKDPKAAITNAYRSTDQFILENSMQLGPGGSTAVTAIVIDG--------KDLWVANVGDSRAVVCERGSANQITV 178 (268)
Q Consensus 107 ~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~tt~~~~~i~~--------~~l~~anvGDSr~~l~~~g~~~~lt~ 178 (268)
++.+...+-.+.|+.+|...++++...+... |+..+.+ .+.. .+++.||+|+|.++++++|+..++|+
T Consensus 579 eev~~~~~et~~mr~~fl~~~rklg~~g~~l---g~~~~~~-~i~~d~~~~asS~~l~~Anvg~c~avls~ng~~~p~t~ 654 (1081)
T KOG0618|consen 579 EEVQLYGNETEQMRNTFLRLNRKLGEEGQVL---GGSVVLC-QIVEDSLSPASSKTLFAANVGTCMAVLSRNGKPLPTTR 654 (1081)
T ss_pred HHHHhccChHHHHHHHHHHHhhhhhhhhccc---cchhhhe-eecccccCcccchhhhHhhhccchhhhhhcCCcCcccc
Confidence 9887777777779999999999997665433 3333333 3332 35889999999999999999888887
Q ss_pred CCCCh--H-HHHHHHHcCCeEEeCCCCCCcccCceeeeeccCCccccCCccccceEEEEEeCCCCeEEEEecCCccCCCC
Q 024364 179 DHEPH--A-ERRRIEKQGGFVTSLPGDVPRVNGQLAVARAFGDQSLKAHLSSEPDVRHVPIDPSIEFLILASDGLWKVSC 255 (268)
Q Consensus 179 dH~~~--~-E~~ri~~~gg~~~~~~~~~~~~~~~~~ltr~lG~~~~k~~v~~~p~i~~~~l~~~d~~liL~SDGl~d~l~ 255 (268)
-.... . |.+||+..+|+|.+ .++.+|....||++|.+...|.|.+.|+|....+.+.|+|||+++-+||++|+
T Consensus 655 ~~~~~v~~eE~~RI~~~~g~i~e----d~k~ngvt~~tR~iG~~~l~P~v~p~Phv~~~~Lt~qdE~LIvgn~~lW~~Ls 730 (1081)
T KOG0618|consen 655 SPMLEVDREEYKRIVDSKGFITE----DNKLNGVTSSTRAIGPFSLFPHVLPDPHVSVVILTEQDEFLIVGNKQLWSVLS 730 (1081)
T ss_pred cccccCCHHHHHHHHHhcCeecC----CCeeeceeeeeeecccccccccccCCCceeeEecccCceEEEEcchHHhhhcc
Confidence 65433 2 99999999999984 47899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCC
Q 024364 256 YRSIWTSLCHP 266 (268)
Q Consensus 256 ~~ei~~il~~~ 266 (268)
.++++++++..
T Consensus 731 id~a~~~vRn~ 741 (1081)
T KOG0618|consen 731 IDTAVDAVRNV 741 (1081)
T ss_pred HHHHHHHHhcC
Confidence 99999999743
No 16
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases.
Probab=99.77 E-value=4.3e-17 Score=133.82 Aligned_cols=168 Identities=17% Similarity=0.103 Sum_probs=122.8
Q ss_pred eeEEEEecccCCCCCCCceeeeeecccCCceeEEEEEEcCCCCCchhHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHh
Q 024364 48 VSHGYHLVEGQSGHDMEDYLVAEYRKKKNHVLGLFAIFDGHLGDRVPTYLKDNLFNNILEESNFWKDPKAAITNAYRSTD 127 (268)
Q Consensus 48 ~~~~~~s~~G~r~~~neD~~~~~~~~~~~~~~~l~~V~DG~gG~~~a~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~ 127 (268)
+.+......+.. ..-|.+.+.... ++..+++|+||+|++..|.+++..+...+.+....... +...+..+|
T Consensus 4 ~~~~~~~~p~~~--~~GD~~~~~~~~---~~~~~~~v~Dg~G~G~~aa~~s~~~~~~~~~~~~~~~~----~~~~l~~~n 74 (193)
T smart00331 4 GLIAQYYEDATQ--VGGDFYDVVKLP---EGRLLIAIADVMGKGLAAALAMSMARSALRTLLSEGIS----LSQILERLN 74 (193)
T ss_pred eEEEEEEcchHh--cCccEEEEEEeC---CCeEEEEEEecCCCChHHHHHHHHHHHHHHHHhhcCCC----HHHHHHHHH
Confidence 455666666654 778887653332 35789999999999999999999888877665433222 555666777
Q ss_pred HHHHHhcccCCCCCcceEEEEEE--eCCeEEEEEcCCceeEEEe-cCcccccCCCCCChHHHHHHHHcCCeEEeCCCCCC
Q 024364 128 QFILENSMQLGPGGSTAVTAIVI--DGKDLWVANVGDSRAVVCE-RGSANQITVDHEPHAERRRIEKQGGFVTSLPGDVP 204 (268)
Q Consensus 128 ~~i~~~~~~~~~~~~tt~~~~~i--~~~~l~~anvGDSr~~l~~-~g~~~~lt~dH~~~~E~~ri~~~gg~~~~~~~~~~ 204 (268)
+.+.... ....++|++++++ ..++++++|+||+|+|+++ ++...+.+.+
T Consensus 75 ~~l~~~~---~~~~~~T~~~~~id~~~~~l~~~~~Gd~~~~~~~~~~~~~~~~~~------------------------- 126 (193)
T smart00331 75 RAIYENG---EDGMFATLFLALYDFAGGTLSYANAGHSPPYLLRADGGLVEDLDD------------------------- 126 (193)
T ss_pred HHHHhcC---CCCcEEEEEEEEEECCCCEEEEEeCCCCceEEEECCCCeEEEcCC-------------------------
Confidence 7776552 2346777777776 5788999999999999998 5555444443
Q ss_pred cccCceeeeeccCCccccCCccccceEEEEEeCCCCeEEEEecCCccCCCCHHHHHHhhcC
Q 024364 205 RVNGQLAVARAFGDQSLKAHLSSEPDVRHVPIDPSIEFLILASDGLWKVSCYRSIWTSLCH 265 (268)
Q Consensus 205 ~~~~~~~ltr~lG~~~~k~~v~~~p~i~~~~l~~~d~~liL~SDGl~d~l~~~ei~~il~~ 265 (268)
.++.+|... ..+++...+++.++ +.|+|+|||||+.++++++.++|.+
T Consensus 127 -------~~~~lG~~~-----~~~~~~~~~~l~~g-d~l~l~TDGl~e~~~~~~l~~~l~~ 174 (193)
T smart00331 127 -------LGAPLGLEP-----DVEVDVRELTLEPG-DLLLLYTDGLTEARNPERLEELLEE 174 (193)
T ss_pred -------CCceeeeCC-----CCcceeEEEeeCCC-CEEEEECCCccccCChHHHHHHHHH
Confidence 234566554 45677888899999 7788999999999999998888865
No 17
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=99.29 E-value=7.3e-11 Score=115.09 Aligned_cols=155 Identities=13% Similarity=0.041 Sum_probs=106.2
Q ss_pred CCCCceeeeeecccCCceeEEEEEEcCCCCCchhHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHhHHHHHhcccCCCC
Q 024364 61 HDMEDYLVAEYRKKKNHVLGLFAIFDGHLGDRVPTYLKDNLFNNILEESNFWKDPKAAITNAYRSTDQFILENSMQLGPG 140 (268)
Q Consensus 61 ~~neD~~~~~~~~~~~~~~~l~~V~DG~gG~~~a~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~ 140 (268)
..+.|.+.+... +++..+++|+||+|++..|...+..+.+.+.+......+ ...++..+|..+..... ..
T Consensus 565 ~vsGD~y~~~~l---~~g~~~~~laDGmGhG~~Aa~~S~~~~~ll~~~~~~g~~----~~~ai~~lN~~L~~~~~---~~ 634 (764)
T TIGR02865 565 LVSGDSYSFGKL---SAGKYAVAISDGMGSGPEAAQESSACVRLLEKFLESGFD----REVAIKTVNSILSLRST---DE 634 (764)
T ss_pred cccCceEEEEEE---CCCEEEEEEEcccCCCHHHHHHHHHHHHHHHHHHHcCCC----HHHHHHHHHHHHHhCCC---CC
Confidence 588998764322 235678999999998888887777665555432222222 35566777777654422 23
Q ss_pred CcceEEEEEEe--CCeEEEEEcCCceeEEEecCcccccCCCCCChHHHHHHHHcCCeEEeCCCCCCcccCceeeeeccCC
Q 024364 141 GSTAVTAIVID--GKDLWVANVGDSRAVVCERGSANQITVDHEPHAERRRIEKQGGFVTSLPGDVPRVNGQLAVARAFGD 218 (268)
Q Consensus 141 ~~tt~~~~~i~--~~~l~~anvGDSr~~l~~~g~~~~lt~dH~~~~E~~ri~~~gg~~~~~~~~~~~~~~~~~ltr~lG~ 218 (268)
..+|+.+++++ .+++.++|+|+++.|+.+++.+.+++..+.| +|.
T Consensus 635 ~faTl~l~~IDl~~g~~~~~~aG~~p~~i~r~~~v~~i~s~~lP---------------------------------lGi 681 (764)
T TIGR02865 635 KFSTLDLSVIDLYTGQAEFVKVGAVPSFIKRGAKVEVIRSSNLP---------------------------------IGI 681 (764)
T ss_pred eEEEEEEEEEECCCCeEEEEecCCCceEEEECCEEEEecCCCce---------------------------------eEe
Confidence 56787777775 5789999999999999999887776543221 332
Q ss_pred ccccCCccccceEEEEEeCCCCeEEEEecCCccCCCCHHH-----HHHhhc
Q 024364 219 QSLKAHLSSEPDVRHVPIDPSIEFLILASDGLWKVSCYRS-----IWTSLC 264 (268)
Q Consensus 219 ~~~k~~v~~~p~i~~~~l~~~d~~liL~SDGl~d~l~~~e-----i~~il~ 264 (268)
.. ..+++....++.++ |+|||+|||+||..++.+ +.++++
T Consensus 682 l~-----~~~~~~~~~~L~~G-D~Lll~SDGv~E~~~~~~~~~~~l~~~l~ 726 (764)
T TIGR02865 682 LD-----EVDVELVRKKLKNG-DLIVMVSDGVLEGEKEVEGKVLWLVRKLK 726 (764)
T ss_pred cc-----CCccceEEEEeCCC-CEEEEECCCCCcCCcccccHHHHHHHHHH
Confidence 22 34677788899999 788899999999876533 555554
No 18
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 3KE6_B 3ZT9_A 3RNR_A 3EQ2_A 3F7A_B 3F79_A 3ES2_B 3PU9_B 3T91_B 3T9Q_B ....
Probab=99.11 E-value=2.3e-09 Score=87.69 Aligned_cols=136 Identities=15% Similarity=0.140 Sum_probs=88.7
Q ss_pred ceeEEEEEEcCCCCCchhHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHhHHHHHhcccCCCCCcceEEEEEEe--CCe
Q 024364 77 HVLGLFAIFDGHLGDRVPTYLKDNLFNNILEESNFWKDPKAAITNAYRSTDQFILENSMQLGPGGSTAVTAIVID--GKD 154 (268)
Q Consensus 77 ~~~~l~~V~DG~gG~~~a~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~tt~~~~~i~--~~~ 154 (268)
++.++++|+|+.|.+-.|...+..+...+........+ ....+..+|+.+....... ...+|++++.++ .+.
T Consensus 2 ~~~~~~~v~D~~GhG~~aa~~~~~~~~~~~~~~~~~~~----p~~~l~~ln~~l~~~~~~~--~~~~t~~~~~~d~~~~~ 75 (193)
T PF07228_consen 2 DGRYFIIVGDVSGHGVSAALLSAALASAIRELLDEGLD----PEELLEALNRRLYRDLKGD--NRYATACYAIIDPETGT 75 (193)
T ss_dssp TTEEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHTTTS----HHHHHHHHHHHHHHHTTTT--STTEEEEEEEEETTTTE
T ss_pred CCEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHHcCCC----HHHHHHHHHHHHHHHhhhc--cccceEEEEEecccceE
Confidence 35678999999998877777777776666544322223 5556667777774443222 245566655654 467
Q ss_pred EEEEEcCCceeEEEecCc--ccccCCCCCChHHHHHHHHcCCeEEeCCCCCCcccCceeeeeccCCccccCCccccceEE
Q 024364 155 LWVANVGDSRAVVCERGS--ANQITVDHEPHAERRRIEKQGGFVTSLPGDVPRVNGQLAVARAFGDQSLKAHLSSEPDVR 232 (268)
Q Consensus 155 l~~anvGDSr~~l~~~g~--~~~lt~dH~~~~E~~ri~~~gg~~~~~~~~~~~~~~~~~ltr~lG~~~~k~~v~~~p~i~ 232 (268)
++++|+|+++++++++++ ...+... .-.+|... ..++...
T Consensus 76 l~~~~aG~~~~l~~~~~~~~~~~~~~~---------------------------------~~~lG~~~-----~~~~~~~ 117 (193)
T PF07228_consen 76 LTYANAGHPPPLLLRPGGREIEQLESE---------------------------------GPPLGIFE-----DIDYQEQ 117 (193)
T ss_dssp EEEEEESSSEEEEEETTCTEEEEETCS---------------------------------SBBCSSSC-----TTCEEEE
T ss_pred EEEeCCCCCCEEEEeccccceeecccC---------------------------------ccceeeec-----cccccce
Confidence 999999999999999843 2111111 01255444 3566677
Q ss_pred EEEeCCCCeEEEEecCCccCCCCHH
Q 024364 233 HVPIDPSIEFLILASDGLWKVSCYR 257 (268)
Q Consensus 233 ~~~l~~~d~~liL~SDGl~d~l~~~ 257 (268)
.+++.++ +.|+|+||||+|....+
T Consensus 118 ~~~l~~g-d~l~l~TDGl~e~~~~~ 141 (193)
T PF07228_consen 118 EIQLEPG-DRLLLYTDGLFEALNED 141 (193)
T ss_dssp EEE--TT-EEEEEECHHHCTTTCHH
T ss_pred EEEeccc-cEEEEeCCChhhccCCc
Confidence 8888888 88889999999998543
No 19
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription]
Probab=97.07 E-value=0.039 Score=49.82 Aligned_cols=157 Identities=15% Similarity=0.066 Sum_probs=92.6
Q ss_pred CCCceeeeeecccCCceeEEEEEEcCCCCCchhHHHHHHHHHHHHhccCC-CcCHHHHHHHHHHHHhHHHHHhcccCCCC
Q 024364 62 DMEDYLVAEYRKKKNHVLGLFAIFDGHLGDRVPTYLKDNLFNNILEESNF-WKDPKAAITNAYRSTDQFILENSMQLGPG 140 (268)
Q Consensus 62 ~neD~~~~~~~~~~~~~~~l~~V~DG~gG~~~a~~~~~~~~~~l~~~~~~-~~~~~~~l~~~~~~~~~~i~~~~~~~~~~ 140 (268)
..-|++-+.... .....++|.|..|-+-.|..........+...... .-++. ..+..+|+.+.......
T Consensus 161 vGGD~yd~~~~~---~~~~~i~I~DvsG~Gv~aal~m~~~~~~~~~~~~~~~~~p~----~~l~~~n~~~~~~~~~~--- 230 (367)
T COG2208 161 VGGDYYDFIQLG---EKRLRIGIGDVSGKGVPAALLMLMPKLALRLLLESGPLDPA----DVLETLNRVLKQNLEED--- 230 (367)
T ss_pred cCCceEEEEEEC---CcEEEEEEEeccCCCHHHHHHHHHHHHHHHHhhhcccCCHH----HHHHHHHHHHHhcccCC---
Confidence 444555433222 25778899999996655555533332222222111 22333 34455566555443322
Q ss_pred CcceEEEEEEe--CCeEEEEEcCCceeEEEecCcccccCCCCCChHHHHHHHHcCCeEEeCCCCCCcccCceeeeeccCC
Q 024364 141 GSTAVTAIVID--GKDLWVANVGDSRAVVCERGSANQITVDHEPHAERRRIEKQGGFVTSLPGDVPRVNGQLAVARAFGD 218 (268)
Q Consensus 141 ~~tt~~~~~i~--~~~l~~anvGDSr~~l~~~g~~~~lt~dH~~~~E~~ri~~~gg~~~~~~~~~~~~~~~~~ltr~lG~ 218 (268)
.-+|+...+++ .+.+..+|+|---.++++.+....+ . ... .....+|.
T Consensus 231 ~f~T~~~~~~d~~~~~l~y~~aGH~p~~i~~~~~~~~~--------------------~-------~l~---~~g~piG~ 280 (367)
T COG2208 231 MFVTLFLGVYDLDSGELTYSNAGHEPALILSADGEIEV--------------------E-------DLT---ALGLPIGL 280 (367)
T ss_pred cEEEEEEEEEeccCCEEEEeeCCCCCeeEEEcCCCcee--------------------E-------Ecc---CCCceeee
Confidence 56677666654 4789999999988888886532100 0 000 33455666
Q ss_pred ccccCCccccceEEEEEeCCCCeEEEEecCCccC-------CCCHHHHHHhhc
Q 024364 219 QSLKAHLSSEPDVRHVPIDPSIEFLILASDGLWK-------VSCYRSIWTSLC 264 (268)
Q Consensus 219 ~~~k~~v~~~p~i~~~~l~~~d~~liL~SDGl~d-------~l~~~ei~~il~ 264 (268)
.. ...+.+...++.++ |.|||.|||+.+ .+..+...++++
T Consensus 281 ~~-----~~~~~~~~~~l~~g-d~lvl~tDGv~Ea~~~~~~~~~~~~~~~~~~ 327 (367)
T COG2208 281 LP-----DYQYEVASLQLEPG-DLLVLYTDGVTEARNSDGEFFGLERLLKILG 327 (367)
T ss_pred cC-----CccchheeEEecCC-CEEEEEcCCeeeeecCCccEecHHHHHHHHH
Confidence 66 66778888999997 889999999998 444444544443
No 20
>PRK05457 heat shock protein HtpX; Provisional
Probab=54.32 E-value=9 Score=33.35 Aligned_cols=37 Identities=16% Similarity=0.135 Sum_probs=28.4
Q ss_pred ceEEEEEeCCCCeEEEEecCCccCCCCHHHHHHhhcCC
Q 024364 229 PDVRHVPIDPSIEFLILASDGLWKVSCYRSIWTSLCHP 266 (268)
Q Consensus 229 p~i~~~~l~~~d~~liL~SDGl~d~l~~~ei~~il~~~ 266 (268)
|.-......+. ..+|+.|+|+++.++++|+..+++||
T Consensus 105 ~NAfa~G~~~~-~~~V~vt~gLl~~L~~~El~aVlAHE 141 (284)
T PRK05457 105 INAFATGASKN-NSLVAVSTGLLQNMSRDEVEAVLAHE 141 (284)
T ss_pred ceEEEecCCCC-CeEEEeehHHhhhCCHHHHHHHHHHH
Confidence 44444444444 56779999999999999999999876
No 21
>PRK03982 heat shock protein HtpX; Provisional
Probab=51.22 E-value=11 Score=32.89 Aligned_cols=32 Identities=13% Similarity=0.255 Sum_probs=24.9
Q ss_pred EEeCCCCeEEEEecCCccCCCCHHHHHHhhcCC
Q 024364 234 VPIDPSIEFLILASDGLWKVSCYRSIWTSLCHP 266 (268)
Q Consensus 234 ~~l~~~d~~liL~SDGl~d~l~~~ei~~il~~~ 266 (268)
....+. .-.|..|||+.+.++++|+..+++||
T Consensus 101 ~G~~~~-~~~V~vt~gLl~~l~~~El~AVlAHE 132 (288)
T PRK03982 101 TGRDPK-HAVVAVTEGILNLLNEDELEGVIAHE 132 (288)
T ss_pred eccCCC-CeEEEeehHHHhhCCHHHHHHHHHHH
Confidence 333343 34557899999999999999999876
No 22
>PRK02391 heat shock protein HtpX; Provisional
Probab=50.69 E-value=9 Score=33.58 Aligned_cols=33 Identities=15% Similarity=0.173 Sum_probs=25.7
Q ss_pred EEEeCCCCeEEEEecCCccCCCCHHHHHHhhcCC
Q 024364 233 HVPIDPSIEFLILASDGLWKVSCYRSIWTSLCHP 266 (268)
Q Consensus 233 ~~~l~~~d~~liL~SDGl~d~l~~~ei~~il~~~ 266 (268)
.....+. ..+|+.|||+.+.++++|+..+++||
T Consensus 108 a~G~~~~-~~~V~vt~gLl~~L~~~El~aVlaHE 140 (296)
T PRK02391 108 ATGRSPK-NAVVCVTTGLMRRLDPDELEAVLAHE 140 (296)
T ss_pred EecCCCC-CcEEEecHHHHhhCCHHHHHHHHHHH
Confidence 3333344 45668999999999999999999876
No 23
>PRK03072 heat shock protein HtpX; Provisional
Probab=49.29 E-value=9.7 Score=33.21 Aligned_cols=26 Identities=15% Similarity=0.282 Sum_probs=22.9
Q ss_pred eEEEEecCCccCCCCHHHHHHhhcCC
Q 024364 241 EFLILASDGLWKVSCYRSIWTSLCHP 266 (268)
Q Consensus 241 ~~liL~SDGl~d~l~~~ei~~il~~~ 266 (268)
..+|..|||+.+.++++|+..+++||
T Consensus 109 ~~~v~vt~gLl~~l~~~El~aVlAHE 134 (288)
T PRK03072 109 NAAVCCTEGILQILNERELRGVLGHE 134 (288)
T ss_pred CcEEEecHHHHHhCCHHHHHHHHHHH
Confidence 45668899999999999999999876
No 24
>PF09436 DUF2016: Domain of unknown function (DUF2016); InterPro: IPR018560 This entry represents the N-terminal of proteins that contain a ubiquitin domain.
Probab=46.85 E-value=13 Score=25.21 Aligned_cols=21 Identities=19% Similarity=0.257 Sum_probs=14.3
Q ss_pred eCCCCeEEEEecCCccCCCCH
Q 024364 236 IDPSIEFLILASDGLWKVSCY 256 (268)
Q Consensus 236 l~~~d~~liL~SDGl~d~l~~ 256 (268)
+...++.+|+++||+|=-+..
T Consensus 23 l~~~G~Rllva~nGv~lEv~r 43 (72)
T PF09436_consen 23 LERPGHRLLVASNGVFLEVRR 43 (72)
T ss_pred cccCCcEEEEecCcEEEEEec
Confidence 342347777999999965543
No 25
>PRK04897 heat shock protein HtpX; Provisional
Probab=43.28 E-value=14 Score=32.33 Aligned_cols=37 Identities=14% Similarity=0.205 Sum_probs=27.5
Q ss_pred ceEEEEEeCCCCeEEEEecCCccCCCCHHHHHHhhcCC
Q 024364 229 PDVRHVPIDPSIEFLILASDGLWKVSCYRSIWTSLCHP 266 (268)
Q Consensus 229 p~i~~~~l~~~d~~liL~SDGl~d~l~~~ei~~il~~~ 266 (268)
|.-......+. ...|+.|+|+.+.++++|+..+++||
T Consensus 108 ~NAfa~G~~~~-~~~v~vt~gLl~~l~~~El~aVlAHE 144 (298)
T PRK04897 108 PNAFATGSSPK-NAAVAVTTGLLAIMNREELEGVIGHE 144 (298)
T ss_pred CceEEeccCCC-CcEEEeehHHHhhCCHHHHHHHHHHH
Confidence 33334444444 45669999999999999999999876
No 26
>COG0501 HtpX Zn-dependent protease with chaperone function [Posttranslational modification, protein turnover, chaperones]
Probab=41.03 E-value=9.2 Score=33.15 Aligned_cols=24 Identities=17% Similarity=0.249 Sum_probs=21.6
Q ss_pred EEEecCCccCCCCHHHHHHhhcCC
Q 024364 243 LILASDGLWKVSCYRSIWTSLCHP 266 (268)
Q Consensus 243 liL~SDGl~d~l~~~ei~~il~~~ 266 (268)
-|..|+|+.+.++++||..++.||
T Consensus 141 ~V~vt~gLl~~l~~dEl~aVlaHE 164 (302)
T COG0501 141 RVVVTTGLLDLLNDDELEAVLAHE 164 (302)
T ss_pred eEEecHHHHhhCCHHHHHHHHHHH
Confidence 448899999999999999999876
No 27
>PRK01345 heat shock protein HtpX; Provisional
Probab=39.39 E-value=19 Score=31.86 Aligned_cols=25 Identities=16% Similarity=0.181 Sum_probs=22.4
Q ss_pred EEEEecCCccCCCCHHHHHHhhcCC
Q 024364 242 FLILASDGLWKVSCYRSIWTSLCHP 266 (268)
Q Consensus 242 ~liL~SDGl~d~l~~~ei~~il~~~ 266 (268)
-.|+.|||+.+.++++|+..+|+||
T Consensus 107 ~~V~vt~gLL~~L~~dEL~aVlAHE 131 (317)
T PRK01345 107 AAVAATTGLLQRLSPEEVAGVMAHE 131 (317)
T ss_pred eEEEechHHHhhCCHHHHHHHHHHH
Confidence 4568999999999999999999876
No 28
>PRK03001 M48 family peptidase; Provisional
Probab=38.40 E-value=19 Score=31.23 Aligned_cols=24 Identities=25% Similarity=0.400 Sum_probs=21.6
Q ss_pred EEEecCCccCCCCHHHHHHhhcCC
Q 024364 243 LILASDGLWKVSCYRSIWTSLCHP 266 (268)
Q Consensus 243 liL~SDGl~d~l~~~ei~~il~~~ 266 (268)
-|..|||+.+.++++|+..+++||
T Consensus 108 ~Ivvt~gLl~~l~~~El~aVlAHE 131 (283)
T PRK03001 108 AVAATTGILRVLSEREIRGVMAHE 131 (283)
T ss_pred EEEecHHHHhhCCHHHHHHHHHHH
Confidence 458899999999999999999876
No 29
>PRK02870 heat shock protein HtpX; Provisional
Probab=34.64 E-value=25 Score=31.48 Aligned_cols=25 Identities=12% Similarity=0.186 Sum_probs=22.1
Q ss_pred EEEEecCCccCCCCHHHHHHhhcCC
Q 024364 242 FLILASDGLWKVSCYRSIWTSLCHP 266 (268)
Q Consensus 242 ~liL~SDGl~d~l~~~ei~~il~~~ 266 (268)
-.|..|||+.+.++++|+..+++||
T Consensus 156 ~~Ivvt~GLL~~L~~dEL~aVlAHE 180 (336)
T PRK02870 156 AMVAITTGLLEKLDRDELQAVMAHE 180 (336)
T ss_pred cEEEEehHHhhhCCHHHHHHHHHHH
Confidence 3558999999999999999999876
No 30
>COG2168 DsrH Uncharacterized conserved protein involved in oxidation of intracellular sulfur [Inorganic ion transport and metabolism]
Probab=32.41 E-value=34 Score=24.55 Aligned_cols=30 Identities=17% Similarity=0.255 Sum_probs=21.8
Q ss_pred eCCCCeEEEEecCCccCCCCHHHHHHhhcCC
Q 024364 236 IDPSIEFLILASDGLWKVSCYRSIWTSLCHP 266 (268)
Q Consensus 236 l~~~d~~liL~SDGl~d~l~~~ei~~il~~~ 266 (268)
+.++ |-++|+.||++-.+...+..+.+...
T Consensus 22 l~~~-D~vlL~qdGV~aAl~~~~~~~sl~~~ 51 (96)
T COG2168 22 LTEG-DAVLLLQDGVYAALKGNRYLASLRES 51 (96)
T ss_pred hccc-CeEEEEcccchhhhcCcHHHHHHhcC
Confidence 4566 45669999999999887666655543
No 31
>PRK01265 heat shock protein HtpX; Provisional
Probab=30.93 E-value=16 Score=32.43 Aligned_cols=25 Identities=16% Similarity=0.015 Sum_probs=21.9
Q ss_pred eEEEEecCCccCCCCHHHHHHhhcCC
Q 024364 241 EFLILASDGLWKVSCYRSIWTSLCHP 266 (268)
Q Consensus 241 ~~liL~SDGl~d~l~~~ei~~il~~~ 266 (268)
..| ..|||+.+.++++|+..+++||
T Consensus 123 ~~I-vvt~gLl~~l~~~El~aVlAHE 147 (324)
T PRK01265 123 KRI-AITLPLLKILNRDEIKAVAGHE 147 (324)
T ss_pred CEE-EEehHHHhhCCHHHHHHHHHHH
Confidence 444 7899999999999999999876
No 32
>PRK10693 response regulator of RpoS; Provisional
Probab=28.45 E-value=3.9e+02 Score=23.14 Aligned_cols=90 Identities=12% Similarity=0.104 Sum_probs=47.0
Q ss_pred eeEEEEEEc--CCCCCc-hhHHHHHHHHHHHHhccCCC-cCHHHHHHHHHHHHhHHHHHhcccCCCCCcceEEEEEEe--
Q 024364 78 VLGLFAIFD--GHLGDR-VPTYLKDNLFNNILEESNFW-KDPKAAITNAYRSTDQFILENSMQLGPGGSTAVTAIVID-- 151 (268)
Q Consensus 78 ~~~l~~V~D--G~gG~~-~a~~~~~~~~~~l~~~~~~~-~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~tt~~~~~i~-- 151 (268)
+...|.++| |||++- .|......++..++...... ..........+..+|+.+....... -.|++..+++
T Consensus 162 ~~~~~~~~DvsGhg~hg~~aa~l~~~~~~~~~~~~~~~~~~~~~~p~~~l~~lN~~l~~~~~~~----~~t~~~~~~d~~ 237 (303)
T PRK10693 162 NDLAFYCLDVTRAGDNGVLAALLLRALFNGLLQEQLAHQNQRLPELGALLKQVNHLLRQANLPG----QFPLLVGYYHRE 237 (303)
T ss_pred CcEEEEEEecCCCCcccHHHHHHHHHHHHHHHHHHhcccccccCCHHHHHHHHHHHHHhcCCCc----eeeEEEEEEEcC
Confidence 445555666 565543 44455555455444432100 0000013455667777776653211 2355555554
Q ss_pred CCeEEEEEcCCceeEEEecC
Q 024364 152 GKDLWVANVGDSRAVVCERG 171 (268)
Q Consensus 152 ~~~l~~anvGDSr~~l~~~g 171 (268)
.+.+.+++.|-...++..++
T Consensus 238 ~~~l~~~~AGhp~~~~~~~~ 257 (303)
T PRK10693 238 LKNLILVSAGLNATLNTGEH 257 (303)
T ss_pred CCeEEEEeCCCCCEEecCCe
Confidence 35799999999998854344
No 33
>COG3315 O-Methyltransferase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=21.38 E-value=98 Score=27.14 Aligned_cols=24 Identities=25% Similarity=0.205 Sum_probs=21.2
Q ss_pred CceeEEEecCc-ccccCCCCCChHH
Q 024364 162 DSRAVVCERGS-ANQITVDHEPHAE 185 (268)
Q Consensus 162 DSr~~l~~~g~-~~~lt~dH~~~~E 185 (268)
|||+|.+..+. +...-.||+...|
T Consensus 104 DTRayRl~~~~~~~vfEvD~Pevi~ 128 (297)
T COG3315 104 DTRAYRLDWPKGTRVFEVDLPEVIE 128 (297)
T ss_pred ccceeecCCCCCCeEEECCCcHHHH
Confidence 99999999884 8899999998874
Done!