Query 024367
Match_columns 268
No_of_seqs 148 out of 1151
Neff 8.8
Searched_HMMs 46136
Date Fri Mar 29 04:02:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024367.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024367hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00176 galactinol synthase 100.0 6.2E-59 1.3E-63 407.1 22.8 265 1-267 1-265 (333)
2 cd02537 GT8_Glycogenin Glycoge 100.0 1.4E-41 3E-46 290.0 19.2 208 25-267 1-211 (240)
3 cd00505 Glyco_transf_8 Members 100.0 1E-37 2.2E-42 267.3 17.5 222 26-267 2-243 (246)
4 PRK15171 lipopolysaccharide 1, 100.0 9.1E-37 2E-41 271.0 12.9 224 25-267 24-269 (334)
5 cd04194 GT8_A4GalT_like A4GalT 100.0 2.9E-36 6.3E-41 258.6 11.5 218 29-267 3-245 (248)
6 cd06914 GT8_GNT1 GNT1 is a fun 100.0 3.5E-35 7.7E-40 252.0 16.9 202 25-267 1-237 (278)
7 COG1442 RfaJ Lipopolysaccharid 100.0 4E-35 8.6E-40 256.3 13.0 218 30-267 6-243 (325)
8 PF01501 Glyco_transf_8: Glyco 100.0 8E-35 1.7E-39 248.5 9.1 222 30-267 3-245 (250)
9 cd06431 GT8_LARGE_C LARGE cata 100.0 6.5E-34 1.4E-38 246.6 13.8 220 29-267 5-250 (280)
10 cd06429 GT8_like_1 GT8_like_1 100.0 4.6E-32 1E-36 232.0 12.1 195 31-267 5-239 (257)
11 cd06430 GT8_like_2 GT8_like_2 100.0 1.2E-30 2.6E-35 225.7 15.3 216 28-263 3-255 (304)
12 cd06432 GT8_HUGT1_C_like The C 100.0 1.5E-30 3.2E-35 222.3 12.5 219 31-266 6-243 (248)
13 PLN02718 Probable galacturonos 99.9 1.8E-27 3.9E-32 218.8 10.1 223 34-267 320-572 (603)
14 PLN02523 galacturonosyltransfe 99.9 8.9E-27 1.9E-31 211.8 13.4 216 38-267 258-528 (559)
15 PLN02867 Probable galacturonos 99.9 2.1E-25 4.5E-30 203.1 6.5 158 101-267 330-504 (535)
16 PLN02659 Probable galacturonos 99.9 4.6E-25 1E-29 200.1 6.5 159 101-267 329-502 (534)
17 PLN02870 Probable galacturonos 99.9 6.8E-25 1.5E-29 199.0 4.8 160 100-267 327-501 (533)
18 PLN02829 Probable galacturonos 99.9 9.4E-24 2E-28 194.0 5.9 156 100-267 441-608 (639)
19 PLN02742 Probable galacturonos 99.9 1.1E-22 2.4E-27 185.1 12.3 156 101-267 338-504 (534)
20 PLN02910 polygalacturonate 4-a 99.9 3.5E-23 7.5E-28 190.1 5.9 155 101-267 460-626 (657)
21 PLN02769 Probable galacturonos 99.9 4.7E-23 1E-27 190.5 6.8 149 101-267 437-599 (629)
22 COG5597 Alpha-N-acetylglucosam 99.6 6.9E-17 1.5E-21 136.7 -1.0 181 58-239 106-318 (368)
23 KOG1950 Glycosyl transferase, 98.9 3.8E-09 8.3E-14 95.7 7.1 161 104-264 114-283 (369)
24 PF11051 Mannosyl_trans3: Mann 98.5 5.4E-07 1.2E-11 78.3 7.9 111 32-145 7-122 (271)
25 PF03407 Nucleotid_trans: Nucl 98.4 2E-06 4.3E-11 71.9 10.1 174 65-265 11-204 (212)
26 KOG1879 UDP-glucose:glycoprote 97.9 4E-05 8.8E-10 76.5 9.1 196 25-238 1181-1400(1470)
27 PLN03182 xyloglucan 6-xylosylt 95.3 0.1 2.2E-06 47.3 8.4 82 182-267 241-361 (429)
28 PF05637 Glyco_transf_34: gala 94.5 0.02 4.4E-07 48.8 1.9 79 181-263 140-232 (239)
29 PF07801 DUF1647: Protein of u 92.2 1.1 2.4E-05 34.8 7.9 53 21-76 58-110 (142)
30 KOG1928 Alpha-1,4-N-acetylgluc 91.8 0.16 3.5E-06 45.5 3.2 73 118-226 241-316 (409)
31 PLN03181 glycosyltransferase; 91.6 0.42 9E-06 43.6 5.6 28 103-130 182-214 (453)
32 cd02515 Glyco_transf_6 Glycosy 90.1 1.9 4.2E-05 37.1 8.0 185 29-240 39-247 (271)
33 cd04186 GT_2_like_c Subfamily 80.5 9.6 0.00021 29.1 7.3 81 38-130 9-90 (166)
34 PF04488 Gly_transf_sug: Glyco 79.1 1 2.2E-05 32.8 1.2 19 119-137 80-99 (103)
35 PRK15384 type III secretion sy 74.3 2.9 6.3E-05 35.4 2.7 31 115-147 216-246 (336)
36 PRK15382 non-LEE encoded effec 74.3 3 6.5E-05 35.3 2.8 31 115-147 211-241 (326)
37 cd00761 Glyco_tranf_GTA_type G 73.1 9.2 0.0002 28.2 5.2 82 38-131 9-94 (156)
38 TIGR03469 HonB hopene-associat 73.1 12 0.00026 34.1 6.7 22 115-136 134-156 (384)
39 PRK15383 type III secretion sy 73.0 3.3 7.2E-05 35.0 2.7 31 115-147 219-249 (335)
40 cd06439 CESA_like_1 CESA_like_ 72.6 7.6 0.00017 32.4 5.1 108 16-137 22-133 (251)
41 cd02525 Succinoglycan_BP_ExoA 71.5 13 0.00027 30.8 6.1 88 38-135 12-103 (249)
42 PF05704 Caps_synth: Capsular 70.2 13 0.00027 32.5 5.9 96 21-136 43-143 (276)
43 PF03314 DUF273: Protein of un 69.8 14 0.00031 30.7 5.7 84 112-227 39-127 (222)
44 cd06423 CESA_like CESA_like is 69.2 18 0.00038 27.4 6.1 87 39-134 10-99 (180)
45 PF00535 Glycos_transf_2: Glyc 68.1 3 6.5E-05 31.8 1.5 87 39-137 11-102 (169)
46 PF03414 Glyco_transf_6: Glyco 67.6 13 0.00029 33.1 5.5 191 30-242 105-314 (337)
47 PRK11204 N-glycosyltransferase 65.4 17 0.00037 33.3 6.1 101 31-145 61-168 (420)
48 cd06434 GT2_HAS Hyaluronan syn 65.1 30 0.00066 28.3 7.1 94 38-145 13-110 (235)
49 cd04185 GT_2_like_b Subfamily 63.9 22 0.00047 28.5 5.9 90 39-135 10-101 (202)
50 cd02514 GT13_GLCNAC-TI GT13_GL 62.2 49 0.0011 29.7 8.1 97 30-131 6-114 (334)
51 KOG4748 Subunit of Golgi manno 62.1 11 0.00024 34.0 4.0 82 178-263 241-333 (364)
52 PRK14583 hmsR N-glycosyltransf 60.6 17 0.00037 33.7 5.2 22 113-134 154-176 (444)
53 cd06427 CESA_like_2 CESA_like_ 60.5 44 0.00096 27.7 7.4 89 39-136 14-107 (241)
54 PF10111 Glyco_tranf_2_2: Glyc 59.7 21 0.00047 30.8 5.4 24 113-136 87-111 (281)
55 cd04195 GT2_AmsE_like GT2_AmsE 59.2 37 0.00079 27.0 6.4 18 113-130 79-96 (201)
56 cd06433 GT_2_WfgS_like WfgS an 57.1 45 0.00097 26.1 6.6 86 38-135 10-97 (202)
57 cd06442 DPM1_like DPM1_like re 56.5 12 0.00026 30.4 3.2 23 114-136 78-101 (224)
58 PF01793 Glyco_transf_15: Glyc 55.5 32 0.00069 30.8 5.7 117 19-137 51-198 (328)
59 cd02520 Glucosylceramide_synth 54.8 17 0.00037 29.2 3.8 17 113-129 85-101 (196)
60 cd06437 CESA_CaSu_A2 Cellulose 54.5 72 0.0016 26.1 7.6 33 113-145 86-120 (232)
61 cd02510 pp-GalNAc-T pp-GalNAc- 54.1 41 0.0009 29.1 6.3 89 38-137 11-107 (299)
62 cd04192 GT_2_like_e Subfamily 54.1 32 0.00069 27.9 5.3 24 113-136 81-105 (229)
63 cd06438 EpsO_like EpsO protein 51.1 75 0.0016 25.0 7.0 84 39-130 10-97 (183)
64 KOG1950 Glycosyl transferase, 50.9 6.6 0.00014 35.7 0.7 35 102-136 151-185 (369)
65 cd04179 DPM_DPG-synthase_like 50.8 13 0.00029 29.1 2.5 23 115-137 80-103 (185)
66 cd02522 GT_2_like_a GT_2_like_ 50.7 66 0.0014 25.9 6.7 81 38-134 11-93 (221)
67 cd06421 CESA_CelA_like CESA_Ce 49.5 93 0.002 25.2 7.5 90 31-130 8-100 (234)
68 cd06420 GT2_Chondriotin_Pol_N 48.2 54 0.0012 25.5 5.6 88 38-136 9-102 (182)
69 cd04196 GT_2_like_d Subfamily 45.6 60 0.0013 25.9 5.7 90 39-137 11-103 (214)
70 COG0463 WcaA Glycosyltransfera 43.6 81 0.0017 24.1 6.0 86 35-130 12-98 (291)
71 PF03071 GNT-I: GNT-I family; 43.4 80 0.0017 29.4 6.5 108 26-136 95-213 (434)
72 cd04184 GT2_RfbC_Mx_like Myxoc 42.2 91 0.002 24.6 6.2 24 113-136 82-106 (202)
73 PF04765 DUF616: Protein of un 40.5 41 0.00088 29.8 4.0 98 25-137 65-175 (305)
74 PRK11498 bcsA cellulose syntha 40.3 2.6E+02 0.0056 28.7 10.0 79 55-146 293-374 (852)
75 COG2943 MdoH Membrane glycosyl 40.2 1.8E+02 0.004 28.0 8.2 48 13-61 134-186 (736)
76 PF03452 Anp1: Anp1; InterPro 38.8 1.5E+02 0.0033 25.7 7.2 48 16-66 18-67 (269)
77 TIGR03472 HpnI hopanoid biosyn 36.4 46 0.001 30.0 3.9 22 113-134 125-147 (373)
78 cd02511 Beta4Glucosyltransfera 35.5 2.4E+02 0.0053 23.1 7.9 87 31-136 7-94 (229)
79 TIGR00640 acid_CoA_mut_C methy 34.8 1.6E+02 0.0034 22.5 6.1 46 33-79 62-107 (132)
80 PRK10063 putative glycosyl tra 34.5 1.4E+02 0.003 25.3 6.3 83 38-131 13-99 (248)
81 cd06435 CESA_NdvC_like NdvC_li 34.4 2.5E+02 0.0054 22.8 7.9 22 114-135 84-106 (236)
82 TIGR03111 glyc2_xrt_Gpos1 puta 34.3 1.1E+02 0.0023 28.5 6.0 100 22-135 48-153 (439)
83 PRK05454 glucosyltransferase M 33.9 2.3E+02 0.0051 28.2 8.5 34 113-146 219-255 (691)
84 cd02071 MM_CoA_mut_B12_BD meth 33.6 1.7E+02 0.0037 21.7 6.0 52 27-79 53-104 (122)
85 cd06913 beta3GnTL1_like Beta 1 32.4 2.5E+02 0.0054 22.6 7.4 26 110-135 80-106 (219)
86 PRK10073 putative glycosyl tra 30.9 1.6E+02 0.0036 26.0 6.4 86 38-136 18-108 (328)
87 PF11735 CAP59_mtransfer: Cryp 29.3 1.7E+02 0.0036 25.0 5.8 25 113-138 111-136 (241)
88 PRK13915 putative glucosyl-3-p 27.9 2.3E+02 0.0049 24.9 6.7 100 26-136 33-139 (306)
89 cd02526 GT2_RfbF_like RfbF is 27.2 1.1E+02 0.0023 25.0 4.3 22 114-135 75-97 (237)
90 PLN02726 dolichyl-phosphate be 24.0 1.9E+02 0.0041 23.9 5.4 24 113-136 92-116 (243)
91 PF00578 AhpC-TSA: AhpC/TSA fa 22.3 1.9E+02 0.0042 20.7 4.6 72 2-78 5-82 (124)
92 COG5020 KTR1 Mannosyltransfera 22.1 3.6E+02 0.0078 24.8 6.7 53 22-76 80-135 (399)
93 KOG4472 Glycolipid 2-alpha-man 22.1 3.6E+02 0.0078 24.8 6.7 53 22-76 80-135 (399)
94 PF13704 Glyco_tranf_2_4: Glyc 21.9 2.2E+02 0.0048 19.6 4.7 18 113-130 70-87 (97)
95 COG1216 Predicted glycosyltran 21.3 2.4E+02 0.0051 24.5 5.6 95 34-137 11-108 (305)
96 KOG3887 Predicted small GTPase 20.7 2.4E+02 0.0051 24.5 5.0 47 23-69 101-152 (347)
97 cd04188 DPG_synthase DPG_synth 20.0 82 0.0018 25.3 2.3 24 114-137 82-106 (211)
No 1
>PLN00176 galactinol synthase
Probab=100.00 E-value=6.2e-59 Score=407.14 Aligned_cols=265 Identities=83% Similarity=1.423 Sum_probs=234.3
Q ss_pred CCCCcccccccccccccCCCCCCCeEEEEEeecCcccHHHHHHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHHcCCEE
Q 024367 1 MAPDITPTTITKTTSLSKAPSLPKRAYVTFLAGDGDYWKGVVGLVKGLRKAKSKYPLLVAMLPDVPEEHRKILIEQGCIL 80 (268)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~t~l~~d~~Y~~~~~vl~~Sl~~~~~~~~ivvl~~~~i~~~~~~~L~~~~~~~ 80 (268)
|+|.++...+.+...... ..+++||||++++|++|++++.+|++||+++++.+++++++++++++++++.|++.|+.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~--~~~~~AyVT~L~~n~~Y~~Ga~vL~~SLr~~~s~~~lVvlVt~dVp~e~r~~L~~~g~~V 78 (333)
T PLN00176 1 MAPELTVKKIAASPKALA--KPAKRAYVTFLAGNGDYVKGVVGLAKGLRKVKSAYPLVVAVLPDVPEEHRRILVSQGCIV 78 (333)
T ss_pred CCCccchhhhcccccccc--ccCceEEEEEEecCcchHHHHHHHHHHHHHhCCCCCEEEEECCCCCHHHHHHHHHcCCEE
Confidence 778887764444332222 267899999999999999999999999999999999999999999999999999999999
Q ss_pred EEecccCCCCchhhhhhccccccchheeccccccccEEEEEecceecccCcccccCCCCCceeeeecccccCCCCCCCcc
Q 024367 81 REIEPVYPPENQTQFAMAYYVINYSKLRIWEFVEYSKMIYLDGDIQVFDNIDHLFDLPDGYFYAVMDCFCEKTWSHTPQF 160 (268)
Q Consensus 81 ~~v~~l~~~~~~~~~~~~~~~~~~~KL~i~~l~~~drvlYLD~D~lv~~~l~eLf~~~~~~iaav~d~~~~~~~~~~p~~ 160 (268)
++|+++.++++...+..+++..+|+||++|++.+|+||||||+|++|++||||||+++.+.+|||.||+|+..+++.|++
T Consensus 79 ~~V~~i~~~~~~~~~~~~~~~i~~tKl~iw~l~~ydkvlyLDaD~lv~~nid~Lf~~~~~~~aAV~dc~~~~~~~~~p~~ 158 (333)
T PLN00176 79 REIEPVYPPENQTQFAMAYYVINYSKLRIWEFVEYSKMIYLDGDIQVFENIDHLFDLPDGYFYAVMDCFCEKTWSHTPQY 158 (333)
T ss_pred EEecccCCcccccccccchhhhhhhhhhhccccccceEEEecCCEEeecChHHHhcCCCcceEEEecccccccccccccc
Confidence 99998876555445555556678999999999999999999999999999999999976679999999999889999999
Q ss_pred cccccccCCCCCCCCccCCCCCCCCccceEEEEecCHHHHHHHHHHhhccCCCCCCChHHHHHHHccCccccCCcccccc
Q 024367 161 KIGYCQQCPDKVKWPAELGPKPALYFNAGMFVFEPSLSTYHDLLETVQITTPTSFAEQDFLNMYFRDIYRPIPPIYNLVV 240 (268)
Q Consensus 161 ~~~~~~~~p~~~~~~~~~g~~~~~yfNsGv~li~~~~~~~~~l~~~~~~~~~~~~~DQd~LN~~~~~~~~~Lp~~yN~~~ 240 (268)
++++|..+|++++||...|.++..||||||||++|+.++++++++.+.......|+|||+||.+|.++|..||.+||++.
T Consensus 159 ~~~~c~~~~~~~~wp~~~g~~~~~yFNSGVlvinps~~~~~~ll~~l~~~~~~~f~DQD~LN~~F~~~~~~Lp~~YN~~~ 238 (333)
T PLN00176 159 KIGYCQQCPDKVTWPAELGPPPPLYFNAGMFVFEPSLSTYEDLLETLKITPPTPFAEQDFLNMFFRDIYKPIPPVYNLVL 238 (333)
T ss_pred cccccccchhhccchhhccCCCCCeEEeEEEEEEcCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHcCcEEECCchhcCch
Confidence 99999988888999877775567899999999999999999999998766567899999999999999999999999999
Q ss_pred cccccCCCcccCCCceEEEeecCCCCC
Q 024367 241 AMLWRHPENVEADKAKVVHYCAAVSTI 267 (268)
Q Consensus 241 ~~~~~~~~~~~~~~~~IiHf~g~~~KP 267 (268)
.+.|+|++.|+.++++||||+|.+.||
T Consensus 239 ~~~~~~~~~~~~~~vkIIHY~~~~~KP 265 (333)
T PLN00176 239 AMLWRHPENVELDKVKVVHYCAAGSKP 265 (333)
T ss_pred hhhhhChhhcccCCcEEEEeeCCCCCC
Confidence 888889988888899999999867898
No 2
>cd02537 GT8_Glycogenin Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases.
Probab=100.00 E-value=1.4e-41 Score=289.95 Aligned_cols=208 Identities=41% Similarity=0.701 Sum_probs=174.9
Q ss_pred eEEEEEeecCcccHHHHHHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHHcCCEEEEecccCCCCchhhhhhccccccc
Q 024367 25 RAYVTFLAGDGDYWKGVVGLVKGLRKAKSKYPLLVAMLPDVPEEHRKILIEQGCILREIEPVYPPENQTQFAMAYYVINY 104 (268)
Q Consensus 25 ~a~~t~l~~d~~Y~~~~~vl~~Sl~~~~~~~~ivvl~~~~i~~~~~~~L~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~ 104 (268)
.||||++ +|++|+.+++++++||+++++++++++++++++++++++.|++.+.+++.++.+..+.........++..+|
T Consensus 1 ~ay~t~~-~~~~Y~~~a~vl~~SL~~~~~~~~~~vl~~~~is~~~~~~L~~~~~~~~~v~~i~~~~~~~~~~~~~~~~~~ 79 (240)
T cd02537 1 EAYVTLL-TNDDYLPGALVLGYSLRKVGSSYDLVVLVTPGVSEESREALEEVGWIVREVEPIDPPDSANLLKRPRFKDTY 79 (240)
T ss_pred CEEEEEe-cChhHHHHHHHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHHcCCEEEecCccCCcchhhhccchHHHHHh
Confidence 4899976 588999999999999999999999999998899999999999999888888887654221111223456789
Q ss_pred hheeccccccccEEEEEecceecccCcccccCCCCCceeeeecccccCCCCCCCcccccccccCCCCCCCCccCCCCCCC
Q 024367 105 SKLRIWEFVEYSKMIYLDGDIQVFDNIDHLFDLPDGYFYAVMDCFCEKTWSHTPQFKIGYCQQCPDKVKWPAELGPKPAL 184 (268)
Q Consensus 105 ~KL~i~~l~~~drvlYLD~D~lv~~~l~eLf~~~~~~iaav~d~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~g~~~~~ 184 (268)
+||++|++.+|+||||||+|++|++||++||++ +..++|+.|.. + ..
T Consensus 80 ~kl~~~~l~~~drvlylD~D~~v~~~i~~Lf~~-~~~~~a~~d~~------------------------~--------~~ 126 (240)
T cd02537 80 TKLRLWNLTEYDKVVFLDADTLVLRNIDELFDL-PGEFAAAPDCG------------------------W--------PD 126 (240)
T ss_pred HHHHhccccccceEEEEeCCeeEccCHHHHhCC-CCceeeecccC------------------------c--------cc
Confidence 999999999999999999999999999999999 34588876521 0 27
Q ss_pred CccceEEEEecCHHHHHHHHHHhhccCCCCCCChHHHHHHHccC--ccccCCcccccccccccCCC-cccCCCceEEEee
Q 024367 185 YFNAGMFVFEPSLSTYHDLLETVQITTPTSFAEQDFLNMYFRDI--YRPIPPIYNLVVAMLWRHPE-NVEADKAKVVHYC 261 (268)
Q Consensus 185 yfNsGv~li~~~~~~~~~l~~~~~~~~~~~~~DQd~LN~~~~~~--~~~Lp~~yN~~~~~~~~~~~-~~~~~~~~IiHf~ 261 (268)
|||||||+++++...++++++.+.+..++.++||++||.+|+++ |..||.+||++....+.+++ .+..++++||||+
T Consensus 127 ~fNsGv~l~~~~~~~~~~~~~~~~~~~~~~~~DQdiLN~~~~~~~~~~~l~~~yN~~~~~~~~~~~~~~~~~~~~iiHf~ 206 (240)
T cd02537 127 LFNSGVFVLKPSEETFNDLLDALQDTPSFDGGDQGLLNSYFSDRGIWKRLPFTYNALKPLRYLHPEALWFGDEIKVVHFI 206 (240)
T ss_pred cccceEEEEcCCHHHHHHHHHHHhccCCCCCCCHHHHHHHHcCCCCEeECCcceeeehhhhccCchhhcccCCcEEEEEe
Confidence 89999999999999999999998776557789999999999999 99999999998876544333 3457899999999
Q ss_pred cCCCCC
Q 024367 262 AAVSTI 267 (268)
Q Consensus 262 g~~~KP 267 (268)
| +.||
T Consensus 207 g-~~KP 211 (240)
T cd02537 207 G-GDKP 211 (240)
T ss_pred C-CCCC
Confidence 9 6798
No 3
>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.
Probab=100.00 E-value=1e-37 Score=267.33 Aligned_cols=222 Identities=24% Similarity=0.374 Sum_probs=157.1
Q ss_pred EEEEEeecCcccHHHHHHHHHHHHhcCCC-CCEEEEECCCCCHHHHHHHHHcC----CEEEEecccCCCCchh-hh-hhc
Q 024367 26 AYVTFLAGDGDYWKGVVGLVKGLRKAKSK-YPLLVAMLPDVPEEHRKILIEQG----CILREIEPVYPPENQT-QF-AMA 98 (268)
Q Consensus 26 a~~t~l~~d~~Y~~~~~vl~~Sl~~~~~~-~~ivvl~~~~i~~~~~~~L~~~~----~~~~~v~~l~~~~~~~-~~-~~~ 98 (268)
++++ +|+|++|+.++.|+++||++++++ ..++ ++++++++++++.|++.. .. +++.+++.+.... .. ...
T Consensus 2 ~i~~-~a~d~~y~~~~~v~i~Sl~~~~~~~~~~~-il~~~is~~~~~~L~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~~ 78 (246)
T cd00505 2 AIVI-VATGDEYLRGAIVLMKSVLRHRTKPLRFH-VLTNPLSDTFKAALDNLRKLYNFN-YELIPVDILDSVDSEHLKRP 78 (246)
T ss_pred eEEE-EecCcchhHHHHHHHHHHHHhCCCCeEEE-EEEccccHHHHHHHHHHHhccCce-EEEEeccccCcchhhhhcCc
Confidence 4555 467889999999999999998875 3344 556889999998887642 22 1222222221111 11 123
Q ss_pred cccccchheecccccc-ccEEEEEecceecccCcccccCCC--CCceeeeecccccCCCCCCCcccccccccCCCCCCCC
Q 024367 99 YYVINYSKLRIWEFVE-YSKMIYLDGDIQVFDNIDHLFDLP--DGYFYAVMDCFCEKTWSHTPQFKIGYCQQCPDKVKWP 175 (268)
Q Consensus 99 ~~~~~~~KL~i~~l~~-~drvlYLD~D~lv~~~l~eLf~~~--~~~iaav~d~~~~~~~~~~p~~~~~~~~~~p~~~~~~ 175 (268)
++..+|+||++|++.+ ++||||||+|+||++||++||+++ +..+|||+|+..... ...+ ....+++
T Consensus 79 ~~~~~y~RL~i~~llp~~~kvlYLD~D~iv~~di~~L~~~~l~~~~~aav~d~~~~~~---~~~~--------~~~~~~~ 147 (246)
T cd00505 79 IKIVTLTKLHLPNLVPDYDKILYVDADILVLTDIDELWDTPLGGQELAAAPDPGDRRE---GKYY--------RQKRSHL 147 (246)
T ss_pred cccceeHHHHHHHHhhccCeEEEEcCCeeeccCHHHHhhccCCCCeEEEccCchhhhc---cchh--------hcccCCC
Confidence 4578999999999876 999999999999999999999995 457999988642110 0000 0011111
Q ss_pred ccCCCCCCCCccceEEEEecCHHHHHHHHHHhh-----ccCCCCCCChHHHHHHHccC---ccccCCcccccccccccCC
Q 024367 176 AELGPKPALYFNAGMFVFEPSLSTYHDLLETVQ-----ITTPTSFAEQDFLNMYFRDI---YRPIPPIYNLVVAMLWRHP 247 (268)
Q Consensus 176 ~~~g~~~~~yfNsGv~li~~~~~~~~~l~~~~~-----~~~~~~~~DQd~LN~~~~~~---~~~Lp~~yN~~~~~~~~~~ 247 (268)
....||||||||+|+++++++++.+... ...++.++|||+||.+|.++ +..||++||++....+...
T Consensus 148 -----~~~~yfNsGVmlinl~~~r~~~~~~~~~~~~~~~~~~~~~~DQd~LN~~~~~~~~~i~~L~~~wN~~~~~~~~~~ 222 (246)
T cd00505 148 -----AGPDYFNSGVFVVNLSKERRNQLLKVALEKWLQSLSSLSGGDQDLLNTFFKQVPFIVKSLPCIWNVRLTGCYRSL 222 (246)
T ss_pred -----CCCCceeeeeEEEechHHHHHHHHHHHHHHHHhhcccCccCCcHHHHHHHhcCCCeEEECCCeeeEEecCccccc
Confidence 2357999999999999998777665432 12357889999999999998 9999999999886543322
Q ss_pred Ccc--cCCCceEEEeecCCCCC
Q 024367 248 ENV--EADKAKVVHYCAAVSTI 267 (268)
Q Consensus 248 ~~~--~~~~~~IiHf~g~~~KP 267 (268)
..+ ..++++||||+| +.||
T Consensus 223 ~~~~~~~~~~~iiHy~g-~~KP 243 (246)
T cd00505 223 NCFKAFVKNAKVIHFNG-PTKP 243 (246)
T ss_pred cchhhhcCCCEEEEeCC-CCCC
Confidence 222 267999999999 6898
No 4
>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional
Probab=100.00 E-value=9.1e-37 Score=271.02 Aligned_cols=224 Identities=15% Similarity=0.220 Sum_probs=155.1
Q ss_pred eEEEEEeecCcccHHHHHHHHHHHHhcCCCCC--EEEEECCCCCHHHHHHHHHc----CCEEEEecccCCCCchhhhhh-
Q 024367 25 RAYVTFLAGDGDYWKGVVGLVKGLRKAKSKYP--LLVAMLPDVPEEHRKILIEQ----GCILREIEPVYPPENQTQFAM- 97 (268)
Q Consensus 25 ~a~~t~l~~d~~Y~~~~~vl~~Sl~~~~~~~~--ivvl~~~~i~~~~~~~L~~~----~~~~~~v~~l~~~~~~~~~~~- 97 (268)
....+++++|++|+.+++|++.||+.++++.+ ++ ++++++++++++.|++. +..+ .+..++.. ....++.
T Consensus 24 ~~i~Iv~~~D~ny~~~~~vsi~Sil~nn~~~~~~f~-Il~~~is~e~~~~l~~l~~~~~~~i-~~~~id~~-~~~~~~~~ 100 (334)
T PRK15171 24 NSLDIAYGIDKNFLFGCGVSIASVLLNNPDKSLVFH-VFTDYISDADKQRFSALAKQYNTRI-NIYLINCE-RLKSLPST 100 (334)
T ss_pred CceeEEEECcHhhHHHHHHHHHHHHHhCCCCCEEEE-EEeCCCCHHHHHHHHHHHHhcCCeE-EEEEeCHH-HHhCCccc
Confidence 34556677899999999999999999887644 45 44689999998877653 3332 22233221 1122221
Q ss_pred -ccccccchheeccccc--cccEEEEEecceecccCcccccCCC--CCceeeeecccccCCCCCCCcccccccccCCCCC
Q 024367 98 -AYYVINYSKLRIWEFV--EYSKMIYLDGDIQVFDNIDHLFDLP--DGYFYAVMDCFCEKTWSHTPQFKIGYCQQCPDKV 172 (268)
Q Consensus 98 -~~~~~~~~KL~i~~l~--~~drvlYLD~D~lv~~~l~eLf~~~--~~~iaav~d~~~~~~~~~~p~~~~~~~~~~p~~~ 172 (268)
.++.++|+||+++++. +++||||||||+||.+||++||+++ ++.+|||.+... .. ++.... ..+
T Consensus 101 ~~~s~atY~Rl~ip~llp~~~dkvLYLD~Diiv~~dl~~L~~~dl~~~~~aav~~d~~-~~------~~~~~~----~~l 169 (334)
T PRK15171 101 KNWTYATYFRFIIADYFIDKTDKVLYLDADIACKGSIKELIDLDFAENEIAAVVAEGD-AE------WWSKRA----QSL 169 (334)
T ss_pred CcCCHHHHHHHHHHHhhhhhcCEEEEeeCCEEecCCHHHHHhccCCCCeEEEEEeccc-hh------HHHHHH----Hhc
Confidence 2456899999999985 5999999999999999999999995 356887753210 00 000000 012
Q ss_pred CCCccCCCCCCCCccceEEEEecCHHHHHHH----HHHhhcc---CCCCCCChHHHHHHHccCccccCCccccccccccc
Q 024367 173 KWPAELGPKPALYFNAGMFVFEPSLSTYHDL----LETVQIT---TPTSFAEQDFLNMYFRDIYRPIPPIYNLVVAMLWR 245 (268)
Q Consensus 173 ~~~~~~g~~~~~yfNsGv~li~~~~~~~~~l----~~~~~~~---~~~~~~DQd~LN~~~~~~~~~Lp~~yN~~~~~~~~ 245 (268)
+++ .. ...|||||||+||+++|+.+++ ++.+... .++.++|||+||.+|.++|..||.+||++.+..+.
T Consensus 170 ~~~-~~---~~~YFNsGVlliNl~~wRe~~i~~k~~~~l~~~~~~~~~~~~DQDiLN~~~~~~~~~L~~~wN~~~~~~~~ 245 (334)
T PRK15171 170 QTP-GL---ASGYFNSGFLLINIPAWAQENISAKAIEMLADPEIVSRITHLDQDVLNILLAGKVKFIDAKYNTQFSLNYE 245 (334)
T ss_pred CCc-cc---cccceecceEEEcHHHHHHhhHHHHHHHHHhccccccceeecChhHHHHHHcCCeEECCHhhCCccchhHH
Confidence 221 11 2469999999999999886654 4445432 25678999999999999999999999998764322
Q ss_pred CCCc---ccCCCceEEEeecCCCCC
Q 024367 246 HPEN---VEADKAKVVHYCAAVSTI 267 (268)
Q Consensus 246 ~~~~---~~~~~~~IiHf~g~~~KP 267 (268)
..+. ...++++||||+| +.||
T Consensus 246 ~~~~~~~~~~~~p~IIHy~G-~~KP 269 (334)
T PRK15171 246 LKDSVINPVNDETVFIHYIG-PTKP 269 (334)
T ss_pred HHhcccccccCCCEEEEECC-CCCC
Confidence 1111 1256899999999 7898
No 5
>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune sys
Probab=100.00 E-value=2.9e-36 Score=258.56 Aligned_cols=218 Identities=25% Similarity=0.395 Sum_probs=157.4
Q ss_pred EEeecCcccHHHHHHHHHHHHhcCCC--CCEEEEECCCCCHHHHHHHHHc----CCEEEEecccCCCCchhhh---hhcc
Q 024367 29 TFLAGDGDYWKGVVGLVKGLRKAKSK--YPLLVAMLPDVPEEHRKILIEQ----GCILREIEPVYPPENQTQF---AMAY 99 (268)
Q Consensus 29 t~l~~d~~Y~~~~~vl~~Sl~~~~~~--~~ivvl~~~~i~~~~~~~L~~~----~~~~~~v~~l~~~~~~~~~---~~~~ 99 (268)
+++|+|++|+.++++++.||++++++ ++|+++ +++++++.++.|++. +..+ ++..++.+ ..... ...+
T Consensus 3 I~~~~d~~y~~~~~~~l~Sl~~~~~~~~~~~~il-~~~is~~~~~~L~~~~~~~~~~i-~~~~i~~~-~~~~~~~~~~~~ 79 (248)
T cd04194 3 IVFAIDDNYAPYLAVTIKSILANNSKRDYDFYIL-NDDISEENKKKLKELLKKYNSSI-EFIKIDND-DFKFFPATTDHI 79 (248)
T ss_pred EEEEecHhhHHHHHHHHHHHHhcCCCCceEEEEE-eCCCCHHHHHHHHHHHHhcCCeE-EEEEcCHH-HHhcCCcccccc
Confidence 34567999999999999999999884 445544 578999999999876 3333 22233321 11111 1234
Q ss_pred ccccchheeccccc-cccEEEEEecceecccCcccccCCC--CCceeeeecccccCCCCCCCcccccccccCCCCCCCCc
Q 024367 100 YVINYSKLRIWEFV-EYSKMIYLDGDIQVFDNIDHLFDLP--DGYFYAVMDCFCEKTWSHTPQFKIGYCQQCPDKVKWPA 176 (268)
Q Consensus 100 ~~~~~~KL~i~~l~-~~drvlYLD~D~lv~~~l~eLf~~~--~~~iaav~d~~~~~~~~~~p~~~~~~~~~~p~~~~~~~ 176 (268)
+..+|+||+++++. +++||||||+|++|++||++||+++ +..+||++|+........ . . ..
T Consensus 80 ~~~~y~rl~l~~ll~~~~rvlylD~D~lv~~di~~L~~~~~~~~~~aa~~d~~~~~~~~~----~----~----~~---- 143 (248)
T cd04194 80 SYATYYRLLIPDLLPDYDKVLYLDADIIVLGDLSELFDIDLGDNLLAAVRDPFIEQEKKR----K----R----RL---- 143 (248)
T ss_pred cHHHHHHHHHHHHhcccCEEEEEeCCEEecCCHHHHhcCCcCCCEEEEEecccHHHHHHH----H----h----hc----
Confidence 56789999999986 4999999999999999999999985 457899988643210000 0 0 00
Q ss_pred cCCCCCCCCccceEEEEecCHHHHH----HHHHHhhccC-CCCCCChHHHHHHHccCccccCCcccccccccccCCC---
Q 024367 177 ELGPKPALYFNAGMFVFEPSLSTYH----DLLETVQITT-PTSFAEQDFLNMYFRDIYRPIPPIYNLVVAMLWRHPE--- 248 (268)
Q Consensus 177 ~~g~~~~~yfNsGv~li~~~~~~~~----~l~~~~~~~~-~~~~~DQd~LN~~~~~~~~~Lp~~yN~~~~~~~~~~~--- 248 (268)
.+.....|||||||++|+++++.+ ++++.+.+.. .+.++||++||.+|.++|..||.+||++.........
T Consensus 144 -~~~~~~~yfNsGv~l~nl~~~r~~~~~~~~~~~~~~~~~~~~~~DQd~LN~~~~~~~~~L~~~~N~~~~~~~~~~~~~~ 222 (248)
T cd04194 144 -GGYDDGSYFNSGVLLINLKKWREENITEKLLELIKEYGGRLIYPDQDILNAVLKDKILYLPPRYNFQTGFYYLLKKKSK 222 (248)
T ss_pred -CCCcccceeeecchheeHHHHHHhhhHHHHHHHHHhCCCceeeCChHHHHHHHhCCeEEcCcccccchhHhHHhhccch
Confidence 112346899999999999997754 4555555443 4778999999999999999999999999875432211
Q ss_pred -----cccCCCceEEEeecCCCCC
Q 024367 249 -----NVEADKAKVVHYCAAVSTI 267 (268)
Q Consensus 249 -----~~~~~~~~IiHf~g~~~KP 267 (268)
.+..++++||||+| +.||
T Consensus 223 ~~~~~~~~~~~~~iiHf~g-~~KP 245 (248)
T cd04194 223 EEQELEEARKNPVIIHYTG-SDKP 245 (248)
T ss_pred hHHHHHHHhcCCEEEEeCC-CCCC
Confidence 12478999999999 6898
No 6
>cd06914 GT8_GNT1 GNT1 is a fungal enzyme that belongs to the GT 8 family. N-acetylglucosaminyltransferase is a fungal enzyme that catalyzes the addition of N-acetyl-D-glucosamine to mannotetraose side chains by an alpha 1-2 linkage during the synthesis of mannan. The N-acetyl-D-glucosamine moiety in mannan plays a role in the attachment of mannan to asparagine residues in proteins. The mannotetraose and its N-acetyl-D-glucosamine derivative side chains of mannan are the principle immunochemical determinants on the cell surface. N-acetylglucosaminyltransferase is a member of glycosyltransferase family 8, which are, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed, retaining glycosyltransferases.
Probab=100.00 E-value=3.5e-35 Score=252.03 Aligned_cols=202 Identities=23% Similarity=0.363 Sum_probs=156.2
Q ss_pred eEEEEEeecCcccHHHHHHHHHHHHhcCCCCCEEEEECCCCCHHHHHH-------HHHcCCEEEEecccCCCCchhhhhh
Q 024367 25 RAYVTFLAGDGDYWKGVVGLVKGLRKAKSKYPLLVAMLPDVPEEHRKI-------LIEQGCILREIEPVYPPENQTQFAM 97 (268)
Q Consensus 25 ~a~~t~l~~d~~Y~~~~~vl~~Sl~~~~~~~~ivvl~~~~i~~~~~~~-------L~~~~~~~~~v~~l~~~~~~~~~~~ 97 (268)
+||+|++ +|+.|+++|.++.+||++.++.+++|++++++++...... +...++.+..++.+..+. ..
T Consensus 1 fAYvtl~-Tn~~YL~gAlvL~~sLr~~gs~~dlVvLvt~~~~~~~~~~~~~~~~~l~~~~~~v~~v~~~~~~~-----~~ 74 (278)
T cd06914 1 YAYVNYA-TNADYLCNALILFEQLRRLGSKAKLVLLVPETLLDRNLDDFVRRDLLLARDKVIVKLIPVIIASG-----GD 74 (278)
T ss_pred CeEEEEe-cChhHHHHHHHHHHHHHHhCCCCCEEEEECCCCChhhhhhHHHHHHHhhccCcEEEEcCcccCCC-----CC
Confidence 5999977 5999999999999999999999999999999987654332 223355544444433221 12
Q ss_pred ccccccchheeccccccccEEEEEecceecccCcccccCCC-CCceeeeecccccCCCCCCCcccccccccCCCCCCCCc
Q 024367 98 AYYVINYSKLRIWEFVEYSKMIYLDGDIQVFDNIDHLFDLP-DGYFYAVMDCFCEKTWSHTPQFKIGYCQQCPDKVKWPA 176 (268)
Q Consensus 98 ~~~~~~~~KL~i~~l~~~drvlYLD~D~lv~~~l~eLf~~~-~~~iaav~d~~~~~~~~~~p~~~~~~~~~~p~~~~~~~ 176 (268)
..+..+|+||.+|++.+|+||||||||++|+++|+|||+++ ...+||+ + .
T Consensus 75 ~~~~~~~tKl~~~~l~~y~kvlyLDaD~l~~~~ideLf~~~~~~~~Aap-~------------------------~---- 125 (278)
T cd06914 75 AYWAKSLTKLRAFNQTEYDRIIYFDSDSIIRHPMDELFFLPNYIKFAAP-R------------------------A---- 125 (278)
T ss_pred ccHHHHHHHHHhccccceeeEEEecCChhhhcChHHHhcCCcccceeee-c------------------------C----
Confidence 33455799999999999999999999999999999999997 3334543 1 0
Q ss_pred cCCCCCCCCccceEEEEecCHHHHHHHHHHhhccC--CCCCCChHHHHHHHccC-------ccccCCc-cccccccccc-
Q 024367 177 ELGPKPALYFNAGMFVFEPSLSTYHDLLETVQITT--PTSFAEQDFLNMYFRDI-------YRPIPPI-YNLVVAMLWR- 245 (268)
Q Consensus 177 ~~g~~~~~yfNsGv~li~~~~~~~~~l~~~~~~~~--~~~~~DQd~LN~~~~~~-------~~~Lp~~-yN~~~~~~~~- 245 (268)
..|||||||||+|+.+.++++++.+.... +..++|||+||.+|.++ +..||.+ ||+..+....
T Consensus 126 ------~~~FNSGvmvi~ps~~~~~~l~~~~~~~~~~~~~~~DQdiLN~~~~~~~~~~~~~~~~Lp~~~y~llt~~~r~~ 199 (278)
T cd06914 126 ------YWKFASHLMVIKPSKEAFKELMTEILPAYLNKKNEYDMDLINEEFYNSKQLFKPSVLVLPHRQYGLLTGEFREK 199 (278)
T ss_pred ------cceecceeEEEeCCHHHHHHHHHHHHHhcccCCCCCChHHHHHHHhCCccccCcceEEcCccccccCChhhccc
Confidence 13899999999999999999999876532 34679999999999999 9999997 9998864321
Q ss_pred -------C----CCccc----CCCceEEEeecCC-CCC
Q 024367 246 -------H----PENVE----ADKAKVVHYCAAV-STI 267 (268)
Q Consensus 246 -------~----~~~~~----~~~~~IiHf~g~~-~KP 267 (268)
. .+.|+ ..++++|||+..+ .||
T Consensus 200 ~~~~~l~~~~~~~~~w~~~~~~~~~k~vHFSd~Pl~KP 237 (278)
T cd06914 200 LHKSFLSNAQHLYEKWDPDDVFKESKVIHFSDSPLPKP 237 (278)
T ss_pred CHHHhhccccccccccCHHHHHhhCeEEEecCCCCCCC
Confidence 1 23454 4789999999843 477
No 7
>COG1442 RfaJ Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane]
Probab=100.00 E-value=4e-35 Score=256.34 Aligned_cols=218 Identities=22% Similarity=0.300 Sum_probs=159.8
Q ss_pred EeecCcccHHHHHHHHHHHHhcCC--CCCEEEEECCCCCHHHHHHHHHc----CCEEEEecccCCCCchhhhh---hccc
Q 024367 30 FLAGDGDYWKGVVGLVKGLRKAKS--KYPLLVAMLPDVPEEHRKILIEQ----GCILREIEPVYPPENQTQFA---MAYY 100 (268)
Q Consensus 30 ~l~~d~~Y~~~~~vl~~Sl~~~~~--~~~ivvl~~~~i~~~~~~~L~~~----~~~~~~v~~l~~~~~~~~~~---~~~~ 100 (268)
++++|.+|+.+++|++.||..+++ .+.+++++ +++++|++++|++. +.. +....++.. ....++ .+++
T Consensus 6 v~a~D~nY~~~~gvsI~SiL~~n~~~~~~fhil~-~~i~~e~~~~l~~~~~~f~~~-i~~~~id~~-~~~~~~~~~~~~s 82 (325)
T COG1442 6 AFAFDKNYLIPAGVSIYSLLEHNRKIFYKFHILV-DGLNEEDKKKLNETAEPFKSF-IVLEVIDIE-PFLDYPPFTKRFS 82 (325)
T ss_pred EEEcccccchhHHHHHHHHHHhCccccEEEEEEe-cCCCHHHHHHHHHHHHhhccc-eeeEEEech-hhhcccccccchH
Confidence 456799999999999999999998 67788664 89999999888763 322 223333322 112222 2345
Q ss_pred cccchheeccccc-cccEEEEEecceecccCcccccCCC--CCceeeeecccccCCCCCCCcccccccccCCCCCCCCcc
Q 024367 101 VINYSKLRIWEFV-EYSKMIYLDGDIQVFDNIDHLFDLP--DGYFYAVMDCFCEKTWSHTPQFKIGYCQQCPDKVKWPAE 177 (268)
Q Consensus 101 ~~~~~KL~i~~l~-~~drvlYLD~D~lv~~~l~eLf~~~--~~~iaav~d~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~ 177 (268)
..+|.|++++++. +++|+||||+|++|++++++||+++ +.++|||.|..... . .+... .. .
T Consensus 83 ~~v~~R~fiadlf~~~dK~lylD~Dvi~~g~l~~lf~~~~~~~~~aaV~D~~~~~--~------~~~~~----~~----~ 146 (325)
T COG1442 83 KMVLVRYFLADLFPQYDKMLYLDVDVIFCGDLSELFFIDLEEYYLAAVRDVFSHY--M------KEGAL----RL----E 146 (325)
T ss_pred HHHHHHHHHHHhccccCeEEEEecCEEEcCcHHHHHhcCCCcceEEEEeehhhhh--h------hhhhh----Hh----h
Confidence 6889999999984 7899999999999999999999994 55799999864210 0 00000 00 1
Q ss_pred CCCCCCCCccceEEEEecCHHHHHHHHH----Hhhcc-CCCCCCChHHHHHHHccCccccCCcccccccccccCCC---c
Q 024367 178 LGPKPALYFNAGMFVFEPSLSTYHDLLE----TVQIT-TPTSFAEQDFLNMYFRDIYRPIPPIYNLVVAMLWRHPE---N 249 (268)
Q Consensus 178 ~g~~~~~yfNsGv~li~~~~~~~~~l~~----~~~~~-~~~~~~DQd~LN~~~~~~~~~Lp~~yN~~~~~~~~~~~---~ 249 (268)
.+.-...|||||||++|++.|+.+.+.+ .+... +.+.++|||+||.+|+++|.+||.+||++.++....+. .
T Consensus 147 ~~~~~~~yFNaG~llinl~~W~~~~i~~k~i~~~~~~~~~~~~~DQdiLN~i~~~~~~~L~~~YN~~~~~~~~~~~~~~~ 226 (325)
T COG1442 147 KGDLEGSYFNAGVLLINLKLWREENIFEKLIELLKDKENDLLYPDQDILNMIFEDRVLELPIRYNAIPYIDSQLKDKYIY 226 (325)
T ss_pred hcccccccCccceeeehHHHHHHhhhHHHHHHHHhccccccCCccccHHHHHHHhhhhccCcccceeehhhhccchhhhc
Confidence 1122468999999999999998766544 44333 46889999999999999999999999999875432222 2
Q ss_pred ccCCCceEEEeecCCCCC
Q 024367 250 VEADKAKVVHYCAAVSTI 267 (268)
Q Consensus 250 ~~~~~~~IiHf~g~~~KP 267 (268)
...+++.|+||+| +.||
T Consensus 227 ~~~~~~~iiHy~g-~~KP 243 (325)
T COG1442 227 PFGDDPVILHYAG-PTKP 243 (325)
T ss_pred cCCCCceEEEecC-CCCC
Confidence 2378999999999 7898
No 8
>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 8 GT8 from CAZY comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase (2.4.1.44 from EC), lipopolysaccharide glucosyltransferase 1 (2.4.1.58 from EC), glycogenin glucosyltransferase (2.4.1.186 from EC), inositol 1-alpha-galactosyltransferase (2.4.1.123 from EC). These enzymes have a distant similarity to family GT_24. ; GO: 0016757 transferase activity, transferring glycosyl groups; PDB: 1LL0_D 1ZCV_A 3USR_A 3V90_A 1ZCU_A 1ZCT_A 3V91_A 1ZCY_A 1ZDG_A 1ZDF_A ....
Probab=100.00 E-value=8e-35 Score=248.47 Aligned_cols=222 Identities=27% Similarity=0.431 Sum_probs=147.0
Q ss_pred EeecCcccHHHHHHHHHHHHhcCCC-CCE-EEEECCCCCHHHHHHHHHcCCEEEEecccCCCCch--------hhhhhcc
Q 024367 30 FLAGDGDYWKGVVGLVKGLRKAKSK-YPL-LVAMLPDVPEEHRKILIEQGCILREIEPVYPPENQ--------TQFAMAY 99 (268)
Q Consensus 30 ~l~~d~~Y~~~~~vl~~Sl~~~~~~-~~i-vvl~~~~i~~~~~~~L~~~~~~~~~v~~l~~~~~~--------~~~~~~~ 99 (268)
++++|++|+.+++|+++||++++++ ..+ +++++++++++.++.|++.+..+..+..+...... ......+
T Consensus 3 ~~~~d~~y~~~~~v~i~Sl~~~~~~~~~~~i~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (250)
T PF01501_consen 3 VLACDDNYLEGAAVLIKSLLKNNPDPSNLHIYIITDDISEEDFEKLRALAAEVIEIEPIEFPDISMLEEFQFNSPSKRHF 82 (250)
T ss_dssp EEECSGGGHHHHHHHHHHHHHTTTT-SSEEEEEEESSS-HHHHHHHHHHSCCCCTTECEEETSGGHHH--TTS-HCCTCG
T ss_pred EEEeCHHHHHHHHHHHHHHHHhccccccceEEEecCCCCHHHHHHHhhhcccccceeeeccchHHhhhhhhhcccccccc
Confidence 4567999999999999999999885 454 44567899999999998876543222222111110 0111234
Q ss_pred ccccchheecccc-ccccEEEEEecceecccCcccccCCC--CCceeeeecccccC-CCCCCCcccccccccCCCCCCCC
Q 024367 100 YVINYSKLRIWEF-VEYSKMIYLDGDIQVFDNIDHLFDLP--DGYFYAVMDCFCEK-TWSHTPQFKIGYCQQCPDKVKWP 175 (268)
Q Consensus 100 ~~~~~~KL~i~~l-~~~drvlYLD~D~lv~~~l~eLf~~~--~~~iaav~d~~~~~-~~~~~p~~~~~~~~~~p~~~~~~ 175 (268)
...+|.||+++++ .++|||||||+|++|++||++||+++ +..+||+.|..... .+...+ ..
T Consensus 83 ~~~~~~rl~i~~ll~~~drilyLD~D~lv~~dl~~lf~~~~~~~~~~a~~~~~~~~~~~~~~~---------------~~ 147 (250)
T PF01501_consen 83 SPATFARLFIPDLLPDYDRILYLDADTLVLGDLDELFDLDLQGKYLAAVEDESFDNFPNKRFP---------------FS 147 (250)
T ss_dssp GGGGGGGGGHHHHSTTSSEEEEE-TTEEESS-SHHHHC---TTSSEEEEE----HHHHTSTTS---------------SE
T ss_pred cHHHHHHhhhHHHHhhcCeEEEEcCCeeeecChhhhhcccchhhhccccccchhhhhhhcccc---------------hh
Confidence 5678999999998 79999999999999999999999974 44688887721110 000000 00
Q ss_pred ccCCCCCCCCccceEEEEecCHHHHHHHHHHhh----cc-CCCCCCChHHHHHHHccCccccCCccccccccc-ccCCCc
Q 024367 176 AELGPKPALYFNAGMFVFEPSLSTYHDLLETVQ----IT-TPTSFAEQDFLNMYFRDIYRPIPPIYNLVVAML-WRHPEN 249 (268)
Q Consensus 176 ~~~g~~~~~yfNsGv~li~~~~~~~~~l~~~~~----~~-~~~~~~DQd~LN~~~~~~~~~Lp~~yN~~~~~~-~~~~~~ 249 (268)
...+.....|||||||+++++.++++.+.+.+. .. .+..++||++||.+|.+++..||.+||++.... +.....
T Consensus 148 ~~~~~~~~~~fNsGv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DQ~~ln~~~~~~~~~L~~~~N~~~~~~~~~~~~~ 227 (250)
T PF01501_consen 148 ERKQPGNKPYFNSGVMLFNPSKWRKENILQKLIEWLEQNGMKLGFPDQDILNIVFYGNIKPLPCRYNCQPSWYNQSDDYF 227 (250)
T ss_dssp EECESTTTTSEEEEEEEEEHHHHHHHHHHHHHHHHHHHTTTT-SSCHHHHHHHHHTTGEEEEEGGGSEEHHHHHHTHHHH
T ss_pred hcccCcccccccCcEEEEeechhhhhhhhhhhhhhhhhcccccCcCchHHHhhhccceeEEECchhccccccccccchhh
Confidence 011122469999999999999988777665543 22 246789999999999999999999999998643 110011
Q ss_pred c-cCCCceEEEeecCCCCC
Q 024367 250 V-EADKAKVVHYCAAVSTI 267 (268)
Q Consensus 250 ~-~~~~~~IiHf~g~~~KP 267 (268)
. ..++++||||+| ..||
T Consensus 228 ~~~~~~~~iiHy~g-~~KP 245 (250)
T PF01501_consen 228 NPILEDAKIIHYSG-PPKP 245 (250)
T ss_dssp HHHGCC-SEEE--S-SS-T
T ss_pred HhhcCCeEEEEeCC-CCcC
Confidence 1 268999999999 8898
No 9
>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis. The catalytic domain of LARGE is a putative glycosyltransferase. Mutations of LARGE in mouse and human cause dystroglycanopathies, a disease associated with hypoglycosylation of the membrane protein alpha-dystroglycan (alpha-DG) and consequent loss of extracellular ligand binding. LARGE needs to both physically interact with alpha-dystroglycan and function as a glycosyltransferase in order to stimulate alpha-dystroglycan hyperglycosylation. LARGE localizes to the Golgi apparatus and contains three conserved DxD motifs. While two of the motifs are indispensible for glycosylation function, one is important for localization of th eenzyme. LARGE was originally named because it covers approximately large trunck of genomic DNA, more than 600bp long. The predicted protein structure contains an N-terminal cytoplasmic domain, a transmembrane region, a coiled-coil
Probab=100.00 E-value=6.5e-34 Score=246.63 Aligned_cols=220 Identities=19% Similarity=0.235 Sum_probs=143.4
Q ss_pred EEeecCcccHHHHHHHHHHHHhcCCC-CCEEEEECCCCCHHHHHHHHHc-CCEEEEecccCCCCchhhh---hh-cccc-
Q 024367 29 TFLAGDGDYWKGVVGLVKGLRKAKSK-YPLLVAMLPDVPEEHRKILIEQ-GCILREIEPVYPPENQTQF---AM-AYYV- 101 (268)
Q Consensus 29 t~l~~d~~Y~~~~~vl~~Sl~~~~~~-~~ivvl~~~~i~~~~~~~L~~~-~~~~~~v~~l~~~~~~~~~---~~-~~~~- 101 (268)
+++|+ .+|++++.|++.||..++.. +.++ ++++++++++++.|.+. ...-.+|.++..++..+.+ +. .++.
T Consensus 5 iv~~~-~~y~~~~~~~i~Sil~n~~~~~~fh-ii~d~~s~~~~~~l~~~~~~~~~~i~f~~i~~~~~~~~~~~~~~~s~~ 82 (280)
T cd06431 5 IVCAG-YNASRDVVTLVKSVLFYRRNPLHFH-LITDEIARRILATLFQTWMVPAVEVSFYNAEELKSRVSWIPNKHYSGI 82 (280)
T ss_pred EEEcc-CCcHHHHHHHHHHHHHcCCCCEEEE-EEECCcCHHHHHHHHHhccccCcEEEEEEhHHhhhhhccCcccchhhH
Confidence 44455 99999999999999988642 3445 55688999998888653 1111123333332111111 11 1122
Q ss_pred ccchheeccccc--cccEEEEEecceecccCcccccCC--C--CCc-eeeeecccccCCCCCCCcccccccccCCCCCCC
Q 024367 102 INYSKLRIWEFV--EYSKMIYLDGDIQVFDNIDHLFDL--P--DGY-FYAVMDCFCEKTWSHTPQFKIGYCQQCPDKVKW 174 (268)
Q Consensus 102 ~~~~KL~i~~l~--~~drvlYLD~D~lv~~~l~eLf~~--~--~~~-iaav~d~~~~~~~~~~p~~~~~~~~~~p~~~~~ 174 (268)
.+|.||+++++. +++||||||||+||.+||++||++ + +.. +||+.+.. . +...... .....|
T Consensus 83 y~y~RL~ip~llp~~~dkvLYLD~Diiv~~di~eL~~~~~~~~~~~~~a~v~~~~-~--------~~~~~~~--~~~~~~ 151 (280)
T cd06431 83 YGLMKLVLTEALPSDLEKVIVLDTDITFATDIAELWKIFHKFTGQQVLGLVENQS-D--------WYLGNLW--KNHRPW 151 (280)
T ss_pred HHHHHHHHHHhchhhcCEEEEEcCCEEEcCCHHHHHHHhhhcCCCcEEEEeccch-h--------hhhhhhh--hccCCC
Confidence 256899999975 499999999999999999999987 2 333 45554421 0 0000000 000111
Q ss_pred CccCCCCCCCCccceEEEEecCHHHHHHHHHHh----hc----cCCCCCCChHHHHHHHccC---ccccCCccccccccc
Q 024367 175 PAELGPKPALYFNAGMFVFEPSLSTYHDLLETV----QI----TTPTSFAEQDFLNMYFRDI---YRPIPPIYNLVVAML 243 (268)
Q Consensus 175 ~~~~g~~~~~yfNsGv~li~~~~~~~~~l~~~~----~~----~~~~~~~DQd~LN~~~~~~---~~~Lp~~yN~~~~~~ 243 (268)
+ .. ..|||||||+||+++|+.+++.+.+ ++ ..++.++|||+||.+|.++ ++.||++||++.+..
T Consensus 152 ~-~~----~~yFNsGVmlinL~~wR~~~~~~~~~~~~~~~~~~~~~~~~~DQDiLN~v~~~~~~~~~~L~~~wN~~~~~~ 226 (280)
T cd06431 152 P-AL----GRGFNTGVILLDLDKLRKMKWESMWRLTAERELMSMLSTSLADQDIFNAVIKQNPFLVYQLPCAWNVQLSDH 226 (280)
T ss_pred c-cc----ccceeeeeeeeeHHHHHhhCHHHHHHHHHHHHHhhcCCCCcCcHHHHHHHHcCCcceeEECCCccccccCcc
Confidence 1 11 3599999999999998876654433 22 2356789999999999999 789999999987543
Q ss_pred ccCCCcc-cCCCceEEEeecCCCCC
Q 024367 244 WRHPENV-EADKAKVVHYCAAVSTI 267 (268)
Q Consensus 244 ~~~~~~~-~~~~~~IiHf~g~~~KP 267 (268)
....+.+ +.++|+||||+| +.||
T Consensus 227 ~~~~~~~~~~~~p~IIHf~g-~~KP 250 (280)
T cd06431 227 TRSEQCYRDVSDLKVIHWNS-PKKL 250 (280)
T ss_pred chHhHhhcCcCCCEEEEeCC-CCCC
Confidence 2212222 257899999999 7898
No 10
>cd06429 GT8_like_1 GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=99.97 E-value=4.6e-32 Score=232.01 Aligned_cols=195 Identities=12% Similarity=0.137 Sum_probs=133.6
Q ss_pred eecCcccHHHHHHHHHHHHhcCCC-CCEEE-EECCCCCHHHHHHHHHc----CCEEEEecccCCCCchhh----------
Q 024367 31 LAGDGDYWKGVVGLVKGLRKAKSK-YPLLV-AMLPDVPEEHRKILIEQ----GCILREIEPVYPPENQTQ---------- 94 (268)
Q Consensus 31 l~~d~~Y~~~~~vl~~Sl~~~~~~-~~ivv-l~~~~i~~~~~~~L~~~----~~~~~~v~~l~~~~~~~~---------- 94 (268)
+++| +|+. +++++.|+..++++ .++++ +++++++.+.++.+.+. +.. +++..++.......
T Consensus 5 ~~~D-n~l~-~~v~i~S~l~nn~~~~~~~fhvvtd~~s~~~~~~~~~~~~~~~~~-i~~~~i~~~~~~~~~~~~~~~~~~ 81 (257)
T cd06429 5 IFSD-NRLA-AAVVINSSISNNKDPSNLVFHIVTDNQNYGAMRSWFDLNPLKIAT-VKVLNFDDFKLLGKVKVDSLMQLE 81 (257)
T ss_pred EEec-chhH-HHHHHHHHHHhCCCCCceEEEEecCccCHHHHHHHHHhcCCCCce-EEEEEeCcHHhhcccccchhhhhh
Confidence 4557 9995 55555566555544 55443 66899998888777653 222 22333321100000
Q ss_pred ---------hhh--ccccccchheeccccc-cccEEEEEecceecccCcccccCCC--CCceeeeecccccCCCCCCCcc
Q 024367 95 ---------FAM--AYYVINYSKLRIWEFV-EYSKMIYLDGDIQVFDNIDHLFDLP--DGYFYAVMDCFCEKTWSHTPQF 160 (268)
Q Consensus 95 ---------~~~--~~~~~~~~KL~i~~l~-~~drvlYLD~D~lv~~~l~eLf~~~--~~~iaav~d~~~~~~~~~~p~~ 160 (268)
++. ..+..+|+||++|++. +++||||||||+||++||+|||+++ ++.+|||+
T Consensus 82 ~~~~~~~~~~~~~~~~s~~~y~Rl~ip~llp~~~kvlYLD~Dviv~~dl~eL~~~dl~~~~~aav~-------------- 147 (257)
T cd06429 82 SEADTSNLKQRKPEYISLLNFARFYLPELFPKLEKVIYLDDDVVVQKDLTELWNTDLGGGVAGAVE-------------- 147 (257)
T ss_pred ccccccccccCCccccCHHHHHHHHHHHHhhhhCeEEEEeCCEEEeCCHHHHhhCCCCCCEEEEEh--------------
Confidence 011 1345789999999975 6899999999999999999999985 44455552
Q ss_pred cccccccCCCCCCCCccCCCCCCCCccceEEEEecCHHHHHHH----HHHhhccC-C----CCCCChHHHHHHHccCccc
Q 024367 161 KIGYCQQCPDKVKWPAELGPKPALYFNAGMFVFEPSLSTYHDL----LETVQITT-P----TSFAEQDFLNMYFRDIYRP 231 (268)
Q Consensus 161 ~~~~~~~~p~~~~~~~~~g~~~~~yfNsGv~li~~~~~~~~~l----~~~~~~~~-~----~~~~DQd~LN~~~~~~~~~ 231 (268)
.|||||||++|+++|+.+++ +++++... + ...+||++||.+|.+++..
T Consensus 148 -----------------------dyfNsGV~linl~~wr~~~i~~~~~~~~~~~~~~~~~~~~~~dqd~ln~~~~~~~~~ 204 (257)
T cd06429 148 -----------------------TSWNPGVNVVNLTEWRRQNVTETYEKWMELNQEEEVTLWKLITLPPGLIVFYGLTSP 204 (257)
T ss_pred -----------------------hhcccceEEEeHHHHHhccHHHHHHHHHHHhhhcccchhhcCCccHHHHHccCeeEE
Confidence 27999999999999886655 44444322 1 3457999999999999999
Q ss_pred cCCcccccccccccCC-CcccCCCceEEEeecCCCCC
Q 024367 232 IPPIYNLVVAMLWRHP-ENVEADKAKVVHYCAAVSTI 267 (268)
Q Consensus 232 Lp~~yN~~~~~~~~~~-~~~~~~~~~IiHf~g~~~KP 267 (268)
||.+||++. +.+... .....++++||||+| +.||
T Consensus 205 L~~~wN~~~-l~~~~~~~~~~~~~~~IIHy~G-~~KP 239 (257)
T cd06429 205 LDPSWHVRG-LGYNYGIRPQDIKAAAVLHFNG-NMKP 239 (257)
T ss_pred CChHHcccC-CcccccccccccCCcEEEEECC-CCCC
Confidence 999999973 222111 111256999999999 7898
No 11
>cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=99.97 E-value=1.2e-30 Score=225.75 Aligned_cols=216 Identities=11% Similarity=0.140 Sum_probs=141.4
Q ss_pred EEEeecCcccHHHHHHHHHHHHhcCC-CCCEEEEECCCCCHHHHHHHHHc---CCEEE--EecccCCCCc-hhhhhhccc
Q 024367 28 VTFLAGDGDYWKGVVGLVKGLRKAKS-KYPLLVAMLPDVPEEHRKILIEQ---GCILR--EIEPVYPPEN-QTQFAMAYY 100 (268)
Q Consensus 28 ~t~l~~d~~Y~~~~~vl~~Sl~~~~~-~~~ivvl~~~~i~~~~~~~L~~~---~~~~~--~v~~l~~~~~-~~~~~~~~~ 100 (268)
+++++++++ +..+.++++|+..++. ...++++..+.++++..++|++. +...+ .+.++..|.. ..++..-..
T Consensus 3 ~~vv~~g~~-~~~~~~~lkSil~~n~~~l~Fhi~~d~~~~~~~~~~l~~~~~~~~~~i~~~i~~I~~P~~~~~~ws~l~~ 81 (304)
T cd06430 3 LAVVACGER-LEETLTMLKSAIVFSQKPLRFHIFAEDQLKQSFKEKLDDWPELIDRKFNYTLHPITFPSGNAAEWKKLFK 81 (304)
T ss_pred EEEEEcCCc-HHHHHHHHHHHHHhCCCCEEEEEEECCccCHHHHHHHHHHHHhccceeeeEEEEEecCccchhhhhhccc
Confidence 455566666 8999999999988763 34456555444788877777765 22222 4445544422 112221112
Q ss_pred cccchheeccccc-cccEEEEEecceecccCcccccCC--C--CCceeee-ecccccCCCCCCCcccccccccCCCCCCC
Q 024367 101 VINYSKLRIWEFV-EYSKMIYLDGDIQVFDNIDHLFDL--P--DGYFYAV-MDCFCEKTWSHTPQFKIGYCQQCPDKVKW 174 (268)
Q Consensus 101 ~~~~~KL~i~~l~-~~drvlYLD~D~lv~~~l~eLf~~--~--~~~iaav-~d~~~~~~~~~~p~~~~~~~~~~p~~~~~ 174 (268)
..+|+||+++++. ++|||||||+|++|.+||+|||++ + +..+||+ ++... + ..+|
T Consensus 82 ~~~y~RL~ip~lLp~~dkvLYLD~Dii~~~dI~eL~~~~~df~~~~~aA~v~e~~~-~------------------~~~~ 142 (304)
T cd06430 82 PCAAQRLFLPSLLPDVDSLLYVDTDILFLRPVEEIWSFLKKFNSTQLAAMAPEHEE-P------------------NIGW 142 (304)
T ss_pred HHHHHHHHHHHHhhhhceEEEeccceeecCCHHHHHHHHhhcCCCeEEEEEecccc-c------------------chhh
Confidence 3689999999975 689999999999999999999987 3 3345554 43210 0 0111
Q ss_pred Cc---cCCCCCCCCccceEEEEecCHHHH-----------H----HHHHHhhcc-CCCCCCChHHHHHHHccC---cccc
Q 024367 175 PA---ELGPKPALYFNAGMFVFEPSLSTY-----------H----DLLETVQIT-TPTSFAEQDFLNMYFRDI---YRPI 232 (268)
Q Consensus 175 ~~---~~g~~~~~yfNsGv~li~~~~~~~-----------~----~l~~~~~~~-~~~~~~DQd~LN~~~~~~---~~~L 232 (268)
.. ........+||||||+||+++|+. . ++++.++++ .++.++|||+||.+|.++ ++.|
T Consensus 143 ~~~~~~~~~~~~~gFNSGVmLmNL~~wR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~DQDiLN~v~~~~p~~~~~L 222 (304)
T cd06430 143 YNRFARHPYYGKTGVNSGVMLMNLTRMRRKYFKNDMTPVGLRWEEILMPLYKKYKLKITWGDQDLINIIFHHNPEMLYVF 222 (304)
T ss_pred hhhhcccCcccccccccceeeeeHHHHHhhhcccccchhhhhHHHHHHHHHHhcccCCCCCCHHHHHHHHcCCCCeEEEc
Confidence 00 000112357999999999999886 2 345555554 357899999999999997 8999
Q ss_pred CCcccccccccc-c-CCCcccCCCceEEEeecC
Q 024367 233 PPIYNLVVAMLW-R-HPENVEADKAKVVHYCAA 263 (268)
Q Consensus 233 p~~yN~~~~~~~-~-~~~~~~~~~~~IiHf~g~ 263 (268)
|++||++..... . ..+.-+.+.++|||+.+.
T Consensus 223 p~~wN~~~d~~~y~~~~~~~~~~~~~~~H~n~~ 255 (304)
T cd06430 223 PCHWNYRPDHCMYGSNCKAAEEEGVFILHGNRG 255 (304)
T ss_pred CccccCCccceeecccccccccccceEEEcCCC
Confidence 999998774221 1 111113579999999973
No 12
>cd06432 GT8_HUGT1_C_like The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family. C-terminal domain of glycoprotein glucosyltransferase (UGT). UGT is a large glycoprotein whose C-terminus contains the catalytic activity. This catalytic C-terminal domain is highly homologous to Glycosyltransferase Family 8 (GT 8) and contains the DXD motif that coordinates donor sugar binding, characteristic for Family 8 glycosyltransferases. GT 8 proteins are retaining enzymes based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. The non-catalytic N-terminal portion of the human UTG1 (HUGT1) has been shown to monitor the protein folding status and activate its glucosyltransferase activity.
Probab=99.97 E-value=1.5e-30 Score=222.31 Aligned_cols=219 Identities=17% Similarity=0.195 Sum_probs=143.5
Q ss_pred eecCcccHHHHHHHHHHHHhcCC-CCCEEEEECCCCCHHHHHHHHHc----CCEEEEecccCCCCchhhhhhc-cccccc
Q 024367 31 LAGDGDYWKGVVGLVKGLRKAKS-KYPLLVAMLPDVPEEHRKILIEQ----GCILREIEPVYPPENQTQFAMA-YYVINY 104 (268)
Q Consensus 31 l~~d~~Y~~~~~vl~~Sl~~~~~-~~~ivvl~~~~i~~~~~~~L~~~----~~~~~~v~~l~~~~~~~~~~~~-~~~~~~ 104 (268)
+++++.|+.+++|++.||.+++. .+.|+++ ++++++++++.|++. +..+. ...++.+.....+... +...+|
T Consensus 6 ~~~~~~y~~~~~v~l~Sll~nn~~~~~fyil-~~~is~e~~~~l~~~~~~~~~~i~-~i~i~~~~~~~~~~~~~~~~~~y 83 (248)
T cd06432 6 VASGHLYERFLRIMMLSVMKNTKSPVKFWFI-KNFLSPQFKEFLPEMAKEYGFEYE-LVTYKWPRWLHKQTEKQRIIWGY 83 (248)
T ss_pred EcCcHHHHHHHHHHHHHHHHcCCCCEEEEEE-eCCCCHHHHHHHHHHHHHhCCceE-EEEecChhhhhcccccchhHHHH
Confidence 46789999999999999999864 3456655 579999998887653 44321 1112211111111111 112357
Q ss_pred hheecccc-c-cccEEEEEecceecccCcccccCCC--CCceeeeecccccCCCCCCCcccccccccCCCCCCCCccCCC
Q 024367 105 SKLRIWEF-V-EYSKMIYLDGDIQVFDNIDHLFDLP--DGYFYAVMDCFCEKTWSHTPQFKIGYCQQCPDKVKWPAELGP 180 (268)
Q Consensus 105 ~KL~i~~l-~-~~drvlYLD~D~lv~~~l~eLf~~~--~~~iaav~d~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~g~ 180 (268)
.||.+..+ + +++||||||+|+||.+||++||+++ +..+|||+|+...........+..+. |...+
T Consensus 84 ~rL~~~~lLP~~vdkvLYLD~Dilv~~dL~eL~~~dl~~~~~Aav~d~~~~~~~~~~~~~~~~~---------~~~~l-- 152 (248)
T cd06432 84 KILFLDVLFPLNVDKVIFVDADQIVRTDLKELMDMDLKGAPYGYTPFCDSRKEMDGFRFWKQGY---------WKSHL-- 152 (248)
T ss_pred HHHHHHHhhhhccCEEEEEcCCceecccHHHHHhcCcCCCeEEEeeccccchhcccchhhhhhh---------hhhhc--
Confidence 78888765 4 5899999999999999999999985 55688887743110000000000000 00011
Q ss_pred CCCCCccceEEEEecCHHHHHHHHHH----hh---c-cCCCCCCChHHHHHHHccC-ccccCCcccccccccccCCCccc
Q 024367 181 KPALYFNAGMFVFEPSLSTYHDLLET----VQ---I-TTPTSFAEQDFLNMYFRDI-YRPIPPIYNLVVAMLWRHPENVE 251 (268)
Q Consensus 181 ~~~~yfNsGv~li~~~~~~~~~l~~~----~~---~-~~~~~~~DQd~LN~~~~~~-~~~Lp~~yN~~~~~~~~~~~~~~ 251 (268)
....|||||||+||+++|+.+.+.+. ++ . ..++.++|||+||.++.++ ++.||.+||++.. |+..+ .
T Consensus 153 ~~~~YfNSGVmliNL~~wR~~~i~~~~~~~~~~l~~~~~~l~~~DQDiLN~v~~~~~i~~Lp~~w~~~~~--~~~~~--~ 228 (248)
T cd06432 153 RGRPYHISALYVVDLKRFRRIAAGDRLRGQYQQLSQDPNSLANLDQDLPNNMQHQVPIFSLPQEWLWCET--WCSDE--S 228 (248)
T ss_pred CCCCccceeeEEEeHHHHHHHhHHHHHHHHHHHHhcCCCccccCCchhhHHHhccCCeEECChHHHHHHH--Hhccc--c
Confidence 23469999999999999987665442 21 2 2357889999999999886 9999999998765 43222 2
Q ss_pred CCCceEEEeecCCCC
Q 024367 252 ADKAKVVHYCAAVST 266 (268)
Q Consensus 252 ~~~~~IiHf~g~~~K 266 (268)
++.+.+|||+..+.|
T Consensus 229 ~~~~~~~~~~~~~~~ 243 (248)
T cd06432 229 KKKAKTIDLCNNPLT 243 (248)
T ss_pred cCccceeecccCCCC
Confidence 789999999986543
No 13
>PLN02718 Probable galacturonosyltransferase
Probab=99.94 E-value=1.8e-27 Score=218.82 Aligned_cols=223 Identities=13% Similarity=0.164 Sum_probs=144.7
Q ss_pred CcccHHHHHHHHHHHHhc--CCCCCEE-EEECCCCCHHHHHHHHHcCC---EEEEecccCC----CCc----hhhhh--h
Q 024367 34 DGDYWKGVVGLVKGLRKA--KSKYPLL-VAMLPDVPEEHRKILIEQGC---ILREIEPVYP----PEN----QTQFA--M 97 (268)
Q Consensus 34 d~~Y~~~~~vl~~Sl~~~--~~~~~iv-vl~~~~i~~~~~~~L~~~~~---~~~~v~~l~~----~~~----~~~~~--~ 97 (268)
+|+|+ +++|++.|+..+ ++. .++ .+++++++.+.++.+..... ..+++..++. +.. ...+. .
T Consensus 320 sDNvl-aasVvInSil~Ns~np~-~ivFHVvTD~is~~~mk~wf~l~~~~~a~I~V~~Iddf~~lp~~~~~~lk~l~s~~ 397 (603)
T PLN02718 320 SDNVL-ACSVVVNSTISSSKEPE-KIVFHVVTDSLNYPAISMWFLLNPPGKATIQILNIDDMNVLPADYNSLLMKQNSHD 397 (603)
T ss_pred cCCce-eEEEEhhhhhhccCCCC-cEEEEEEeCCCCHHHHHHHHHhCCCCCcEEEEEecchhccccccchhhhhhccccc
Confidence 45675 899999999887 343 343 26689999988887655421 1122322221 100 01111 1
Q ss_pred --ccccccchheeccccc-cccEEEEEecceecccCcccccCCC--CCceeeeecccccCCCCCC-CcccccccccCCCC
Q 024367 98 --AYYVINYSKLRIWEFV-EYSKMIYLDGDIQVFDNIDHLFDLP--DGYFYAVMDCFCEKTWSHT-PQFKIGYCQQCPDK 171 (268)
Q Consensus 98 --~~~~~~~~KL~i~~l~-~~drvlYLD~D~lv~~~l~eLf~~~--~~~iaav~d~~~~~~~~~~-p~~~~~~~~~~p~~ 171 (268)
..+..+|+||++|++. +.+||||||+|+||.+||++||+++ ++.+|||.||.......+. ..+ ++. ..| .
T Consensus 398 ~~~~S~~~y~Rl~ipellp~l~KvLYLD~DvVV~~DL~eL~~iDl~~~v~aaVedC~~~~~~~~~~~~~-lnf--s~p-~ 473 (603)
T PLN02718 398 PRYISALNHARFYLPDIFPGLNKIVLFDHDVVVQRDLSRLWSLDMKGKVVGAVETCLEGEPSFRSMDTF-INF--SDP-W 473 (603)
T ss_pred cccccHHHHHHHHHHHHhcccCEEEEEECCEEecCCHHHHhcCCCCCcEEEEeccccccccchhhhhhh-hhc--cch-h
Confidence 1235689999999975 6899999999999999999999985 5568899887531100000 000 000 000 0
Q ss_pred CCCCccCCCCCCCCccceEEEEecCHHHHHHHH----HHhhccCCCCCCChHHHH---HHHccCccccCCcccccccccc
Q 024367 172 VKWPAELGPKPALYFNAGMFVFEPSLSTYHDLL----ETVQITTPTSFAEQDFLN---MYFRDIYRPIPPIYNLVVAMLW 244 (268)
Q Consensus 172 ~~~~~~~g~~~~~yfNsGv~li~~~~~~~~~l~----~~~~~~~~~~~~DQd~LN---~~~~~~~~~Lp~~yN~~~~~~~ 244 (268)
+. ... .+..+|||+||||||+++|+.+++. ++++...+..+.|||.|| .+|.+++..||++||..... +
T Consensus 474 i~--~~f-n~~~CyfNsGVlLIDLk~WReenITe~~~~~l~~n~~~~l~dqdaLpp~LlvF~gri~~LD~rWNv~gLG-~ 549 (603)
T PLN02718 474 VA--KKF-DPKACTWAFGMNLFDLEEWRRQKLTSVYHKYLQLGVKRPLWKAGSLPIGWLTFYNQTVALDKRWHVLGLG-H 549 (603)
T ss_pred hh--ccc-CCCccccccceEEEeHHHHHhcChHHHHHHHHHhccCccccCcccccHHHHHhcCceeecChHHhccCcc-c
Confidence 00 011 1346899999999999999876554 455444344678999997 89999999999999987632 2
Q ss_pred cCC-CcccCCCceEEEeecCCCCC
Q 024367 245 RHP-ENVEADKAKVVHYCAAVSTI 267 (268)
Q Consensus 245 ~~~-~~~~~~~~~IiHf~g~~~KP 267 (268)
... ...+.++++||||+| ..||
T Consensus 550 ~~~i~~~~i~~aaIIHYnG-~~KP 572 (603)
T PLN02718 550 ESGVGASDIEQAAVIHYDG-VMKP 572 (603)
T ss_pred cccccccccCCCEEEEECC-CCCc
Confidence 111 111368999999999 7898
No 14
>PLN02523 galacturonosyltransferase
Probab=99.94 E-value=8.9e-27 Score=211.84 Aligned_cols=216 Identities=16% Similarity=0.222 Sum_probs=140.2
Q ss_pred HHHHHHHHHHHHhc-CCCCCEE-EEECCCCCHHHHHHHHHc----CCE--EEEecccCCCC-----c---hh--------
Q 024367 38 WKGVVGLVKGLRKA-KSKYPLL-VAMLPDVPEEHRKILIEQ----GCI--LREIEPVYPPE-----N---QT-------- 93 (268)
Q Consensus 38 ~~~~~vl~~Sl~~~-~~~~~iv-vl~~~~i~~~~~~~L~~~----~~~--~~~v~~l~~~~-----~---~~-------- 93 (268)
+.++.|.+.|+..+ ++...++ .++|++++...++.+-.. +.. +..|+.+..-. . ..
T Consensus 258 vlAAsVvInStv~Ns~~p~~~VFHIVTD~ln~~amk~Wf~~n~~~~a~I~V~~Iedf~~ln~~~~pvlk~l~s~~~~~~~ 337 (559)
T PLN02523 258 VIAASVVVNSAVKNAKEPWKHVFHVVTDRMNLAAMKVMFKMRDLNGAHVEVKAVEDYKFLNSSYVPVLRQLESANLQKFY 337 (559)
T ss_pred chhhhhhHHHHHHccCCCcceEEEEEeCCCCHHHHHHHHhhCCCCCcEEEEEEeehhhhcccccchHHHhhhhhhhhhhh
Confidence 88899999999987 3333443 377899997766655332 222 23333211100 0 00
Q ss_pred -------------h--hhhc--cccccchheeccccc-cccEEEEEecceecccCcccccCCC--CCceeeeecccccCC
Q 024367 94 -------------Q--FAMA--YYVINYSKLRIWEFV-EYSKMIYLDGDIQVFDNIDHLFDLP--DGYFYAVMDCFCEKT 153 (268)
Q Consensus 94 -------------~--~~~~--~~~~~~~KL~i~~l~-~~drvlYLD~D~lv~~~l~eLf~~~--~~~iaav~d~~~~~~ 153 (268)
. +..+ .+..+|+||++|++. +++||||||+|+||.+||++||+++ ++.+|||+||.....
T Consensus 338 f~~~~~~~~~~~~~~k~~~p~ylS~~ny~Rf~IPeLLP~ldKVLYLD~DVVVq~DLseLw~iDL~gkv~aAVeDc~~~~~ 417 (559)
T PLN02523 338 FENKLENATKDSSNMKFRNPKYLSMLNHLRFYLPEMYPKLHRILFLDDDVVVQKDLTGLWKIDMDGKVNGAVETCFGSFH 417 (559)
T ss_pred ccccccccccccccccccCcchhhHHHHHHHHHHHHhcccCeEEEEeCCEEecCCHHHHHhCcCCCceEEEehhhhhHHH
Confidence 0 0001 134578999999984 6999999999999999999999985 567889988742100
Q ss_pred CCCCCcccccccccCCCCCCCCc--cCCCCCCCCccceEEEEecCHHHHHHHHHHhh----ccCCCCCCChHHHH---HH
Q 024367 154 WSHTPQFKIGYCQQCPDKVKWPA--ELGPKPALYFNAGMFVFEPSLSTYHDLLETVQ----ITTPTSFAEQDFLN---MY 224 (268)
Q Consensus 154 ~~~~p~~~~~~~~~~p~~~~~~~--~~g~~~~~yfNsGv~li~~~~~~~~~l~~~~~----~~~~~~~~DQd~LN---~~ 224 (268)
.+. ... .++.|. ..-.+..++||+|||+||+++|+.+++.+.+. ......+.||+.|| .+
T Consensus 418 -----r~~-~~l-----n~s~p~i~~yFNs~aC~wnsGVmlINL~~WRe~nITek~~~w~~ln~~~~l~DqdaLpp~Liv 486 (559)
T PLN02523 418 -----RYA-QYL-----NFSHPLIKEKFNPKACAWAYGMNIFDLDAWRREKCTEQYHYWQNLNENRTLWKLGTLPPGLIT 486 (559)
T ss_pred -----HHH-Hhh-----cccchhhhhCcCCCcccccCCcEEEeHHHHHHhchHHHHHHHHHhccccccccccccchHHHH
Confidence 000 000 011010 00012457777799999999999877766432 22346789999995 89
Q ss_pred HccCccccCCcccccccccccCCCcc--cCCCceEEEeecCCCCC
Q 024367 225 FRDIYRPIPPIYNLVVAMLWRHPENV--EADKAKVVHYCAAVSTI 267 (268)
Q Consensus 225 ~~~~~~~Lp~~yN~~~~~~~~~~~~~--~~~~~~IiHf~g~~~KP 267 (268)
|.+++..|+++||++... + .+... +.++++||||+| ..||
T Consensus 487 F~gri~~LD~rWNvlglG-y-~~~i~~~~i~~paIIHYnG-~~KP 528 (559)
T PLN02523 487 FYSTTKPLDKSWHVLGLG-Y-NPSISMDEIRNAAVIHFNG-NMKP 528 (559)
T ss_pred hcCceEecCchhhccCCc-c-CCCccccccCCCEEEEECC-CCCc
Confidence 999999999999986532 1 12111 257899999999 7898
No 15
>PLN02867 Probable galacturonosyltransferase
Probab=99.91 E-value=2.1e-25 Score=203.10 Aligned_cols=158 Identities=22% Similarity=0.358 Sum_probs=110.5
Q ss_pred cccchheeccccc-cccEEEEEecceecccCcccccCCC--CCceeeeecccccCCCCCCCccc-ccccccCCCCCCCCc
Q 024367 101 VINYSKLRIWEFV-EYSKMIYLDGDIQVFDNIDHLFDLP--DGYFYAVMDCFCEKTWSHTPQFK-IGYCQQCPDKVKWPA 176 (268)
Q Consensus 101 ~~~~~KL~i~~l~-~~drvlYLD~D~lv~~~l~eLf~~~--~~~iaav~d~~~~~~~~~~p~~~-~~~~~~~p~~~~~~~ 176 (268)
..+|+||++|++. +++||||||+|+||.+||++||+++ ++.+|||.|..|.... .+... .++.. ...|.
T Consensus 330 ~lnYlRflIPeLLP~LdKVLYLD~DVVVqgDLseLwdiDL~gkviaAV~D~~c~~~~--~~~~~~~~YlN-----fsnp~ 402 (535)
T PLN02867 330 LLNHLRIYIPELFPDLNKIVFLDDDVVVQHDLSSLWELDLNGKVVGAVVDSWCGDNC--CPGRKYKDYLN-----FSHPL 402 (535)
T ss_pred HHHHHHHHHHHHhhccCeEEEecCCEEEcCchHHHHhCcCCCCeEEEEecccccccc--ccchhhhhhcc-----ccchh
Confidence 4578999999985 6899999999999999999999995 5569999886543210 00000 00000 00010
Q ss_pred -cCC-CCCCCCccceEEEEecCHHHHHHHHH----HhhccC--CCCCCChHHHHH---HHccCccccCCccccccccccc
Q 024367 177 -ELG-PKPALYFNAGMFVFEPSLSTYHDLLE----TVQITT--PTSFAEQDFLNM---YFRDIYRPIPPIYNLVVAMLWR 245 (268)
Q Consensus 177 -~~g-~~~~~yfNsGv~li~~~~~~~~~l~~----~~~~~~--~~~~~DQd~LN~---~~~~~~~~Lp~~yN~~~~~~~~ 245 (268)
..+ .+..+||||||||||+++|+.+++.+ +++... ...+.|||.||. +|.++|..||.+||+. ++.+.
T Consensus 403 i~~~~~p~~cYFNSGVmLINL~~WRe~nITek~~~~Le~n~~~~~~l~dqd~LN~~LlvF~g~v~~LD~rWNv~-gLgy~ 481 (535)
T PLN02867 403 ISSNLDQERCAWLYGMNVFDLKAWRRTNITEAYHKWLKLSLNSGLQLWQPGALPPALLAFKGHVHPIDPSWHVA-GLGSR 481 (535)
T ss_pred hhccCCCCCcceecceeeeeHHHHHHhcHHHHHHHHHHhchhcccccccccccchHHHHhcCcEEECChhhccc-CCCcc
Confidence 011 13468999999999999998876654 344432 356789999996 8999999999999984 33333
Q ss_pred CCCcc-c-CCCceEEEeecCCCCC
Q 024367 246 HPENV-E-ADKAKVVHYCAAVSTI 267 (268)
Q Consensus 246 ~~~~~-~-~~~~~IiHf~g~~~KP 267 (268)
.+... + .++++||||+| ..||
T Consensus 482 ~~~~~~~~i~~paIIHYnG-~~KP 504 (535)
T PLN02867 482 PPEVPREILESAAVLHFSG-PAKP 504 (535)
T ss_pred cccchhhhcCCcEEEEECC-CCCc
Confidence 22211 2 57999999999 7898
No 16
>PLN02659 Probable galacturonosyltransferase
Probab=99.91 E-value=4.6e-25 Score=200.14 Aligned_cols=159 Identities=19% Similarity=0.292 Sum_probs=109.5
Q ss_pred cccchheeccccc-cccEEEEEecceecccCcccccCCC--CCceeeeecccccCCC--CCCCcccccccccCCCCCCCC
Q 024367 101 VINYSKLRIWEFV-EYSKMIYLDGDIQVFDNIDHLFDLP--DGYFYAVMDCFCEKTW--SHTPQFKIGYCQQCPDKVKWP 175 (268)
Q Consensus 101 ~~~~~KL~i~~l~-~~drvlYLD~D~lv~~~l~eLf~~~--~~~iaav~d~~~~~~~--~~~p~~~~~~~~~~p~~~~~~ 175 (268)
..+|+||++|++. +++||||||+|+||++||++||+++ ++.+|||+||...... .+...-.+. ...| .+.
T Consensus 329 ~~nY~RL~IPeLLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkv~AAVeDc~~~d~~~~~~~~~~yL~--~s~p-~i~-- 403 (534)
T PLN02659 329 VMNHIRIHLPELFPSLNKVVFLDDDIVVQTDLSPLWDIDMNGKVNGAVETCRGEDKFVMSKKLKSYLN--FSHP-LIA-- 403 (534)
T ss_pred HHHHHHHHHHHHhhhcCeEEEeeCCEEEcCchHHHHhCCCCCcEEEEeeccccccchhhhHHHHHhhc--ccch-hhh--
Confidence 4578999999985 6999999999999999999999995 5678899886421100 000000000 0001 000
Q ss_pred ccCCCCCCCCccceEEEEecCHHHHHHH----HHHhhcc--CCCCCCChHHH---HHHHccCccccCCcccccccccccC
Q 024367 176 AELGPKPALYFNAGMFVFEPSLSTYHDL----LETVQIT--TPTSFAEQDFL---NMYFRDIYRPIPPIYNLVVAMLWRH 246 (268)
Q Consensus 176 ~~~g~~~~~yfNsGv~li~~~~~~~~~l----~~~~~~~--~~~~~~DQd~L---N~~~~~~~~~Lp~~yN~~~~~~~~~ 246 (268)
... .+..+|||+|||+||+++|+.+++ ++++++. +...+.|||+| |.+|.++++.||.+||+.. +.+..
T Consensus 404 ~yF-n~~~cYfNsGVlLINLk~WRe~nITek~l~~l~~n~~~~l~l~DQdaLp~~LivF~g~v~~LD~rWN~~g-Lg~~~ 481 (534)
T PLN02659 404 KNF-DPNECAWAYGMNIFDLEAWRKTNISSTYHHWLEENLKSDLSLWQLGTLPPGLIAFHGHVHVIDPFWHMLG-LGYQE 481 (534)
T ss_pred hcc-CccccceecceeEeeHHHHHhcChHHHHHHHHHhcccccccccccccchHHHHHhcCCEEECChhheecC-Ccccc
Confidence 011 123679999999999999986554 4555443 34677899999 5889999999999999854 22222
Q ss_pred CCcc-cCCCceEEEeecCCCCC
Q 024367 247 PENV-EADKAKVVHYCAAVSTI 267 (268)
Q Consensus 247 ~~~~-~~~~~~IiHf~g~~~KP 267 (268)
.... ..++++||||+| ..||
T Consensus 482 ~~~~~~i~~paIIHYnG-~~KP 502 (534)
T PLN02659 482 NTSLADAESAGVVHFNG-RAKP 502 (534)
T ss_pred cccccccCCcEEEEECC-CCCc
Confidence 1112 368999999999 7898
No 17
>PLN02870 Probable galacturonosyltransferase
Probab=99.90 E-value=6.8e-25 Score=199.00 Aligned_cols=160 Identities=19% Similarity=0.340 Sum_probs=110.7
Q ss_pred ccccchheeccccc-cccEEEEEecceecccCcccccCCC--CCceeeeecccccCCCCCCCcccccccc-cCCCCCCCC
Q 024367 100 YVINYSKLRIWEFV-EYSKMIYLDGDIQVFDNIDHLFDLP--DGYFYAVMDCFCEKTWSHTPQFKIGYCQ-QCPDKVKWP 175 (268)
Q Consensus 100 ~~~~~~KL~i~~l~-~~drvlYLD~D~lv~~~l~eLf~~~--~~~iaav~d~~~~~~~~~~p~~~~~~~~-~~p~~~~~~ 175 (268)
+..+|+||++|++. +.+||||||+|+||++||++||+++ ++.+|||.||.....+.....+. .+.. ..| ..
T Consensus 327 S~lny~Rl~LPelLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkviaAVeDc~~~~~~~~~~~~~-~YfNfs~p--~i-- 401 (533)
T PLN02870 327 SLLNHLRIYLPELFPNLDKVVFLDDDVVIQRDLSPLWDIDLGGKVNGAVETCRGEDEWVMSKRFR-NYFNFSHP--LI-- 401 (533)
T ss_pred CHHHHHHHHHHHHhhhcCeEEEEeCCEEecCcHHHHhhCCCCCceEEEEccccccchhhhhhhhh-hhcccccc--hh--
Confidence 34578999999985 6999999999999999999999995 56788998864211000000000 0000 001 00
Q ss_pred ccCCC-CCCCCccceEEEEecCHHHHHHH----HHHhhcc--CCCCCCChHHH---HHHHccCccccCCccccccccccc
Q 024367 176 AELGP-KPALYFNAGMFVFEPSLSTYHDL----LETVQIT--TPTSFAEQDFL---NMYFRDIYRPIPPIYNLVVAMLWR 245 (268)
Q Consensus 176 ~~~g~-~~~~yfNsGv~li~~~~~~~~~l----~~~~~~~--~~~~~~DQd~L---N~~~~~~~~~Lp~~yN~~~~~~~~ 245 (268)
..+. +..+|||||||+||+++|+.+++ ++++++. +++.+.|||+| |.+|.++++.||.+||++.. .+.
T Consensus 402 -~~~fd~~~cyfNSGVlLINL~~WRe~nITek~~~~l~~n~~~~l~l~DQdaLp~~livf~g~v~~LD~rWN~~gL-gy~ 479 (533)
T PLN02870 402 -AKNLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKSNLTMWKLGTLPPALIAFKGHVHPIDPSWHMLGL-GYQ 479 (533)
T ss_pred -hcccCcccceeeccchhccHHHHHHcChHHHHHHHHHhhhhcCceecccccccHhHHHhcCceEECChHHhcCCC-CCc
Confidence 0111 34689999999999999987655 4455443 24678999999 58999999999999998542 222
Q ss_pred CCCcc-cCCCceEEEeecCCCCC
Q 024367 246 HPENV-EADKAKVVHYCAAVSTI 267 (268)
Q Consensus 246 ~~~~~-~~~~~~IiHf~g~~~KP 267 (268)
....+ ..++++||||+| ..||
T Consensus 480 ~~~~~~~i~~aaIIHY~G-~~KP 501 (533)
T PLN02870 480 SKTNIESVKKAAVIHYNG-QSKP 501 (533)
T ss_pred ccccccccCCcEEEEECC-CCCC
Confidence 21222 278999999999 7898
No 18
>PLN02829 Probable galacturonosyltransferase
Probab=99.89 E-value=9.4e-24 Score=194.05 Aligned_cols=156 Identities=17% Similarity=0.249 Sum_probs=108.8
Q ss_pred ccccchheeccccc-cccEEEEEecceecccCcccccCCC--CCceeeeecccccCCCCCCCcccccccccCCCCCCCCc
Q 024367 100 YVINYSKLRIWEFV-EYSKMIYLDGDIQVFDNIDHLFDLP--DGYFYAVMDCFCEKTWSHTPQFKIGYCQQCPDKVKWPA 176 (268)
Q Consensus 100 ~~~~~~KL~i~~l~-~~drvlYLD~D~lv~~~l~eLf~~~--~~~iaav~d~~~~~~~~~~p~~~~~~~~~~p~~~~~~~ 176 (268)
+..+|+||++|++. +++||||||+|+||++||++||+++ ++.+|||.||..... ....+ ... ..| .+. .
T Consensus 441 S~lnY~RfyLPeLLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkviAAVedc~~~f~--r~~~~-l~f--s~p-~i~--~ 512 (639)
T PLN02829 441 SILNHLRFYLPEIFPKLNKVLFLDDDIVVQKDLTGLWSIDLKGNVNGAVETCGESFH--RFDRY-LNF--SNP-LIS--K 512 (639)
T ss_pred hHHHHHHHHHHHHhcccCeEEEEeCCEEeCCChHHHHhCCCCCceEEEeccchhhhh--hhhhh-hhc--cch-Hhh--h
Confidence 34578999999985 6899999999999999999999985 557889988742210 00000 000 000 000 0
Q ss_pred cCCCCCCCCccceEEEEecCHHHHHHHH----HHhhccCCCCCCChHHHHHH---HccCccccCCcccccccccccCCCc
Q 024367 177 ELGPKPALYFNAGMFVFEPSLSTYHDLL----ETVQITTPTSFAEQDFLNMY---FRDIYRPIPPIYNLVVAMLWRHPEN 249 (268)
Q Consensus 177 ~~g~~~~~yfNsGv~li~~~~~~~~~l~----~~~~~~~~~~~~DQd~LN~~---~~~~~~~Lp~~yN~~~~~~~~~~~~ 249 (268)
.. .+..+|||+|||+||+++|+.+++. .+++....-...||+.||.+ |.+++..|+++||+.... + .+..
T Consensus 513 ~F-n~~~CyFNSGVmVINL~~WRe~nITe~y~~wm~~n~~r~L~dlgaLPp~Ll~F~g~i~~LD~rWNv~GLG-y-~~~v 589 (639)
T PLN02829 513 NF-DPHACGWAYGMNVFDLDEWKRQNITEVYHSWQKLNHDRQLWKLGTLPPGLITFWKRTYPLDRSWHVLGLG-Y-NPNV 589 (639)
T ss_pred cc-CCcccceecceEEEeHHHHHHhChHHHHHHHHHHccCCccccccCCChHHHHhcCceEecChhheecCCC-C-Cccc
Confidence 01 1246899999999999999876654 34433333356899999976 599999999999997642 2 2332
Q ss_pred c--cCCCceEEEeecCCCCC
Q 024367 250 V--EADKAKVVHYCAAVSTI 267 (268)
Q Consensus 250 ~--~~~~~~IiHf~g~~~KP 267 (268)
. ..++++||||+| ..||
T Consensus 590 ~~~~i~~aaIIHynG-~~KP 608 (639)
T PLN02829 590 NQRDIERAAVIHYNG-NMKP 608 (639)
T ss_pred chhcccCCeEEEECC-CCCc
Confidence 2 278899999999 7898
No 19
>PLN02742 Probable galacturonosyltransferase
Probab=99.89 E-value=1.1e-22 Score=185.06 Aligned_cols=156 Identities=16% Similarity=0.214 Sum_probs=109.3
Q ss_pred cccchheeccccc-cccEEEEEecceecccCcccccCCC--CCceeeeecccccCCCCCCCcccccccccCCCCCCCCcc
Q 024367 101 VINYSKLRIWEFV-EYSKMIYLDGDIQVFDNIDHLFDLP--DGYFYAVMDCFCEKTWSHTPQFKIGYCQQCPDKVKWPAE 177 (268)
Q Consensus 101 ~~~~~KL~i~~l~-~~drvlYLD~D~lv~~~l~eLf~~~--~~~iaav~d~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~ 177 (268)
..+|.||++|++. +.+||||||+|+||.+||++||+++ +..+|||+||..... ....+ ++. ..| .+. .
T Consensus 338 ~~~y~R~~lP~llp~l~KvlYLD~DvVV~~DL~eL~~~DL~~~viaAVedC~~~f~--ry~~y-Lnf--S~p-~i~---~ 408 (534)
T PLN02742 338 MLNHLRFYIPEIYPALEKVVFLDDDVVVQKDLTPLFSIDLHGNVNGAVETCLETFH--RYHKY-LNF--SHP-LIS---S 408 (534)
T ss_pred HHHHHHHHHHHHhhccCeEEEEeCCEEecCChHHHhcCCCCCCEEEEeCchhhhhh--hhhhh-hcc--cch-hhh---c
Confidence 4578899999975 6899999999999999999999995 557999999742210 00000 000 001 010 1
Q ss_pred CCCCCCCCccceEEEEecCHHHHHHHHHHh----hccCCCCCCChHHHHH---HHccCccccCCcccccccccccCCCcc
Q 024367 178 LGPKPALYFNAGMFVFEPSLSTYHDLLETV----QITTPTSFAEQDFLNM---YFRDIYRPIPPIYNLVVAMLWRHPENV 250 (268)
Q Consensus 178 ~g~~~~~yfNsGv~li~~~~~~~~~l~~~~----~~~~~~~~~DQd~LN~---~~~~~~~~Lp~~yN~~~~~~~~~~~~~ 250 (268)
...+..+|||+||||||+++|+.+++.+.+ +.+....+.||+.||. +|.+++..||.+||+..-. +......
T Consensus 409 ~f~~~aC~fNsGV~ViDL~~WRe~nITe~~~~w~e~n~~~~l~d~gaLpp~LLaF~g~~~~LD~rWNv~gLG-~~~~v~~ 487 (534)
T PLN02742 409 HFDPDACGWAFGMNVFDLVAWRKANVTAIYHYWQEQNVDRTLWKLGTLPPGLLTFYGLTEPLDRRWHVLGLG-YDTNIDP 487 (534)
T ss_pred cCCCCccccccCcEEEeHHHHHhhcHHHHHHHHHHhccccccccccccchHHHHHcCcceecChhheecccc-cccccch
Confidence 111356899999999999999887665533 2334567889999996 4999999999999986422 2111111
Q ss_pred -cCCCceEEEeecCCCCC
Q 024367 251 -EADKAKVVHYCAAVSTI 267 (268)
Q Consensus 251 -~~~~~~IiHf~g~~~KP 267 (268)
..++++||||+| ..||
T Consensus 488 ~~i~~aaILHynG-~~KP 504 (534)
T PLN02742 488 RLIESAAVLHFNG-NMKP 504 (534)
T ss_pred hhccCCeEEEECC-CCCc
Confidence 368999999999 7898
No 20
>PLN02910 polygalacturonate 4-alpha-galacturonosyltransferase
Probab=99.88 E-value=3.5e-23 Score=190.07 Aligned_cols=155 Identities=18% Similarity=0.251 Sum_probs=110.6
Q ss_pred cccchheeccccc-cccEEEEEecceecccCcccccCCC--CCceeeeecccccCCCCCCCcccccccccCCCCCCCCcc
Q 024367 101 VINYSKLRIWEFV-EYSKMIYLDGDIQVFDNIDHLFDLP--DGYFYAVMDCFCEKTWSHTPQFKIGYCQQCPDKVKWPAE 177 (268)
Q Consensus 101 ~~~~~KL~i~~l~-~~drvlYLD~D~lv~~~l~eLf~~~--~~~iaav~d~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~ 177 (268)
..+|+||++|++. +.+||||||+|+||.+||++||+++ ++.+|||.||...... ...+ .. ...| .+. ..
T Consensus 460 ~lnY~Rf~LPelLp~l~KVLYLD~DVVV~gDLseLw~iDL~g~v~AAVedc~~~f~r--~~~y-ln--fs~P-~i~--~y 531 (657)
T PLN02910 460 MLNHLRFYLPEVYPKLEKILFLDDDIVVQKDLTPLWSIDMQGMVNGAVETCKESFHR--FDKY-LN--FSNP-KIS--EN 531 (657)
T ss_pred HHHHHHHHHHHHhhhcCeEEEEeCCEEecCchHHHHhCCcCCceEEEecccchhhhh--hhhh-hc--cCCh-hhh--hc
Confidence 4578999999985 5899999999999999999999985 5568888887432100 0000 00 0001 000 00
Q ss_pred CCCCCCCCccceEEEEecCHHHHHHHHHH---h-hccCCCCCCChHHHH---HHHccCccccCCcccccccccccCCCcc
Q 024367 178 LGPKPALYFNAGMFVFEPSLSTYHDLLET---V-QITTPTSFAEQDFLN---MYFRDIYRPIPPIYNLVVAMLWRHPENV 250 (268)
Q Consensus 178 ~g~~~~~yfNsGv~li~~~~~~~~~l~~~---~-~~~~~~~~~DQd~LN---~~~~~~~~~Lp~~yN~~~~~~~~~~~~~ 250 (268)
. .+..+|||+|||+||+++|+.+++.+. + +...+..+.||+.|| .+|.+++..|+++||...-. + .+...
T Consensus 532 F-Ns~aCyfNsGVmVIDL~~WRe~nITe~ye~w~eln~~~~L~dqgsLPpgLLvF~g~i~pLD~rWNv~GLG-y-d~~v~ 608 (657)
T PLN02910 532 F-DPNACGWAFGMNMFDLKEWRKRNITGIYHYWQDLNEDRTLWKLGSLPPGLITFYNLTYPLDRSWHVLGLG-Y-DPALN 608 (657)
T ss_pred c-CCCCceeecccEEEeHHHHHHhhHHHHHHHHHHhcccccccccCCCChHHHHHhCceeecCchheecCCC-C-Ccccc
Confidence 1 124689999999999999998776553 2 223457789999999 69999999999999998632 2 22222
Q ss_pred --cCCCceEEEeecCCCCC
Q 024367 251 --EADKAKVVHYCAAVSTI 267 (268)
Q Consensus 251 --~~~~~~IiHf~g~~~KP 267 (268)
..++++||||+| ..||
T Consensus 609 ~~~i~~AAVLHynG-~~KP 626 (657)
T PLN02910 609 QTEIENAAVVHYNG-NYKP 626 (657)
T ss_pred cccccCcEEEEeCC-CCCc
Confidence 378899999999 7898
No 21
>PLN02769 Probable galacturonosyltransferase
Probab=99.88 E-value=4.7e-23 Score=190.54 Aligned_cols=149 Identities=19% Similarity=0.152 Sum_probs=105.5
Q ss_pred cccchheeccccc-cccEEEEEecceecccCcccccCCC--CCceeeeecccccCCCCCCCcccccccccCCCCCCCCcc
Q 024367 101 VINYSKLRIWEFV-EYSKMIYLDGDIQVFDNIDHLFDLP--DGYFYAVMDCFCEKTWSHTPQFKIGYCQQCPDKVKWPAE 177 (268)
Q Consensus 101 ~~~~~KL~i~~l~-~~drvlYLD~D~lv~~~l~eLf~~~--~~~iaav~d~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~ 177 (268)
..+|+||++|++. +.+||||||+|+||.+||++||+++ ++.+|||+||.... ... .. .++ .
T Consensus 437 ~~nh~RfyIPELLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkviAAVedc~~rl--~~~-----~~------yl~---~ 500 (629)
T PLN02769 437 VFSHSHFLLPEIFKKLKKVVVLDDDVVVQRDLSFLWNLDMGGKVNGAVQFCGVRL--GQL-----KN------YLG---D 500 (629)
T ss_pred HHHHHHHHHHHHhhhcCeEEEEeCCEEecCcHHHHhcCCCCCCeEEEehhhhhhh--hhh-----hh------hhc---c
Confidence 4578899999985 5899999999999999999999985 55789998863210 000 00 000 0
Q ss_pred CC-CCCCCCccceEEEEecCHHHHHHHHH----Hhhcc-----CCCCCCChHHHHHHHccCccccCCcccccccccccCC
Q 024367 178 LG-PKPALYFNAGMFVFEPSLSTYHDLLE----TVQIT-----TPTSFAEQDFLNMYFRDIYRPIPPIYNLVVAMLWRHP 247 (268)
Q Consensus 178 ~g-~~~~~yfNsGv~li~~~~~~~~~l~~----~~~~~-----~~~~~~DQd~LN~~~~~~~~~Lp~~yN~~~~~~~~~~ 247 (268)
.+ .+..+|||+||||||+++|+.+++.+ +++.. ..+...+|+++|.+|.++++.||.+||++.-.+ ...
T Consensus 501 ~~F~~~~CyFNSGVLLINL~~WRk~nITe~~~~~~~~~~~~~~~~~~~~~Lp~lnlvF~g~v~~LD~rWNv~gLG~-~~~ 579 (629)
T PLN02769 501 TNFDTNSCAWMSGLNVIDLDKWRELDVTETYLKLLQKFSKDGEESLRAAALPASLLTFQDLIYPLDDRWVLSGLGH-DYG 579 (629)
T ss_pred cCCCccccccccCeeEeeHHHHHHhCHHHHHHHHHHHhhhcccccccccCcCHHHHHhcCeEEECCHHHccccccc-ccc
Confidence 11 13468999999999999998765433 33221 124457888999999999999999999864221 111
Q ss_pred Ccc-cCCCceEEEeecCCCCC
Q 024367 248 ENV-EADKAKVVHYCAAVSTI 267 (268)
Q Consensus 248 ~~~-~~~~~~IiHf~g~~~KP 267 (268)
-.+ ..++++||||+| ..||
T Consensus 580 i~~~~i~~paIIHYnG-~~KP 599 (629)
T PLN02769 580 IDEQAIKKAAVLHYNG-NMKP 599 (629)
T ss_pred ccccccCCcEEEEECC-CCCC
Confidence 111 267999999999 7898
No 22
>COG5597 Alpha-N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.60 E-value=6.9e-17 Score=136.69 Aligned_cols=181 Identities=25% Similarity=0.351 Sum_probs=111.6
Q ss_pred EEEECCCCCHHHHHHHHHcCCEEEEecccCCCCch-----hhhhhccccccchheeccccccccEEEEEecceecccCcc
Q 024367 58 LVAMLPDVPEEHRKILIEQGCILREIEPVYPPENQ-----TQFAMAYYVINYSKLRIWEFVEYSKMIYLDGDIQVFDNID 132 (268)
Q Consensus 58 vvl~~~~i~~~~~~~L~~~~~~~~~v~~l~~~~~~-----~~~~~~~~~~~~~KL~i~~l~~~drvlYLD~D~lv~~~l~ 132 (268)
+++...++.+.....|+..|..+..|..++..+.. ......+|...|+||.+|+..+||||||||+|.|+++++|
T Consensus 106 ~vL~mkg~d~wk~d~l~ldga~~~~vq~i~~hevv~~~~di~~~~~rw~~mftKLrVfeqtEyDRvifLDsDaivlknmD 185 (368)
T COG5597 106 EVLTMKGCDLWKTDLLPLDGAFNARVQRINVHEVVPFTKDIKPDFHRWLDMFTKLRVFEQTEYDRVIFLDSDAIVLKNMD 185 (368)
T ss_pred eehhhcccchhhhhccccchHHHHHhccchHhhhhhhhhccCcCcCcHHHHhHHHHhhhhhhhceEEEeccchHHhhhhH
Confidence 44555666655555555444333334443322110 1122345778899999999999999999999999999999
Q ss_pred cccCCCCCceeeeecccccCCCCCCCcccc-----------ccc--ccC-CCCCCCCc-------cCCCCCCCCccceEE
Q 024367 133 HLFDLPDGYFYAVMDCFCEKTWSHTPQFKI-----------GYC--QQC-PDKVKWPA-------ELGPKPALYFNAGMF 191 (268)
Q Consensus 133 eLf~~~~~~iaav~d~~~~~~~~~~p~~~~-----------~~~--~~~-p~~~~~~~-------~~g~~~~~yfNsGv~ 191 (268)
+||+.|-..++|.+|.+.-+..-|.|+-.+ +.. ..+ | .+-|+. .+-+.-+.+||||+|
T Consensus 186 klFd~Pvyef~a~pD~~~sp~~fhrp~~~i~~~ft~~faayg~~r~~ly~P-ylf~a~~dq~~~hstpP~fk~~FnagLm 264 (368)
T COG5597 186 KLFDYPVYEFAAAPDVYESPADFHRPNSGIFVSFTPAFAAYGKMRAALYAP-YLFWARTDQTFLHSTPPDFKLKFNAGLM 264 (368)
T ss_pred HHhcchhhhhccCCchhhCHHHhcCCCCccceeecHHHHhhcccHhhhccc-cccccccCCcccccCCCcHhhhhccCce
Confidence 999998545777777553221112221110 000 001 2 111210 110112579999999
Q ss_pred EEecCHHHHHHHHHHhh--ccCCCCCCChHHHHHHHcc----CccccCCccccc
Q 024367 192 VFEPSLSTYHDLLETVQ--ITTPTSFAEQDFLNMYFRD----IYRPIPPIYNLV 239 (268)
Q Consensus 192 li~~~~~~~~~l~~~~~--~~~~~~~~DQd~LN~~~~~----~~~~Lp~~yN~~ 239 (268)
+++|++..+.+++..+- -.+......|.++|..+.. .|..++++||..
T Consensus 265 v~~Psk~hm~riv~~alPklydda~mmeqsllnlaYn~~g~FPwerld~~yNG~ 318 (368)
T COG5597 265 VGLPSKMHMLRIVWFALPKLYDDADMMEQSLLNLAYNYEGFFPWERLDPRYNGY 318 (368)
T ss_pred eecchHHHHHHHHHHhhHHhhhhhhHHHHHHHHHHHhhhccCchhhcCcccccc
Confidence 99999999988887652 1223445679999988753 588999999954
No 23
>KOG1950 consensus Glycosyl transferase, family 8 - glycogenin [Carbohydrate transport and metabolism]
Probab=98.88 E-value=3.8e-09 Score=95.68 Aligned_cols=161 Identities=35% Similarity=0.540 Sum_probs=115.2
Q ss_pred chheeccccccccEEEEEecceecccCcccccCCCCCceeeeecccccCCCCCCCcccccccccCCCCCCCCc--cCCCC
Q 024367 104 YSKLRIWEFVEYSKMIYLDGDIQVFDNIDHLFDLPDGYFYAVMDCFCEKTWSHTPQFKIGYCQQCPDKVKWPA--ELGPK 181 (268)
Q Consensus 104 ~~KL~i~~l~~~drvlYLD~D~lv~~~l~eLf~~~~~~iaav~d~~~~~~~~~~p~~~~~~~~~~p~~~~~~~--~~g~~ 181 (268)
+.++.++++.++.+.+|+|.|+-...+++++++.....-.+...+++...+++..++..+.+...++.+-|+. .+...
T Consensus 114 ~~~~~~~~~~~~~a~i~~~~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~f~~~~~~~~~ 193 (369)
T KOG1950|consen 114 DDKIKIWRLIEDGAAIYLVDDIQRFRNDDANFDVPNELNYAKLYMFQLDFYSKLVKIDADDCILKNDDLLFSNWPDLFAT 193 (369)
T ss_pred ccceeecceeccCceEEEecchhhccCccccccccchhcccccceeeecccccceEEeccchhcCChhhhhhhchhhccC
Confidence 5678888888999999999999999999999999654344555555444455555555555544443222210 12222
Q ss_pred CC--CCccceEEEEecCHHHHHHHHHHhhccCCCCCCChHHHHHHHccCccccCCcccccccccccCCCc--cc---CCC
Q 024367 182 PA--LYFNAGMFVFEPSLSTYHDLLETVQITTPTSFAEQDFLNMYFRDIYRPIPPIYNLVVAMLWRHPEN--VE---ADK 254 (268)
Q Consensus 182 ~~--~yfNsGv~li~~~~~~~~~l~~~~~~~~~~~~~DQd~LN~~~~~~~~~Lp~~yN~~~~~~~~~~~~--~~---~~~ 254 (268)
+. ..||+|.|++-|+...++.+++.......+.+.||+++|.+|.......|+.+|......|+++.. +. ...
T Consensus 194 ~~l~~~~n~~~~v~~ps~~~~~~~~~~~~~~~~~~~~~q~~l~~~f~~~~~~~~~~~n~~~~~~~~~p~~~~l~~~~~~~ 273 (369)
T KOG1950|consen 194 NILPLIFNSGLLVFEPSLCNYKDLMEFSEEFESYNGADQGFLHLIFSWIPDRPPPSVNLNLAKLWRHPKKNDLSRASSVL 273 (369)
T ss_pred CCccceeccCccccCCCccchhhHHHhhcccCCCCCccchhhHHHhhcccCCCcccccccccccccCccccchhhccccc
Confidence 33 449999999999998888888888776778899999999999975558888999998888877632 21 333
Q ss_pred ceEEEeecCC
Q 024367 255 AKVVHYCAAV 264 (268)
Q Consensus 255 ~~IiHf~g~~ 264 (268)
....||.|.+
T Consensus 274 ~~~~~y~~~~ 283 (369)
T KOG1950|consen 274 RYALHYLGAN 283 (369)
T ss_pred chhhhccccC
Confidence 3455999954
No 24
>PF11051 Mannosyl_trans3: Mannosyltransferase putative; InterPro: IPR022751 Alpha-mannosyltransferase is responsible for the addition of residues to the outer chain of core N-linked polysaccharides and to O-linked mannotriose. It is implicated in late Golgi modifications [][][]. The proteins matching this entry are conserved in fungi and also found in some phototrophic organisms.; GO: 0006486 protein glycosylation
Probab=98.47 E-value=5.4e-07 Score=78.26 Aligned_cols=111 Identities=18% Similarity=0.231 Sum_probs=74.6
Q ss_pred ecCcccHHHHHHHHHHHHhcCCCCCEEEEEC--CCCCHHHHHHHHH-cCCEEEEecccCCCCchhh-hhhccccccchhe
Q 024367 32 AGDGDYWKGVVGLVKGLRKAKSKYPLLVAML--PDVPEEHRKILIE-QGCILREIEPVYPPENQTQ-FAMAYYVINYSKL 107 (268)
Q Consensus 32 ~~d~~Y~~~~~vl~~Sl~~~~~~~~ivvl~~--~~i~~~~~~~L~~-~~~~~~~v~~l~~~~~~~~-~~~~~~~~~~~KL 107 (268)
+..+.|+..+..+++.||+.+.+.||-|++. ++++++.++.|.. ..+..+.+..+-.++.... +... .-..|.
T Consensus 7 ~~g~~~~~~a~~lI~~LR~~g~~LPIEI~~~~~~dl~~~~~~~l~~~q~v~~vd~~~~~~~~~~~~~~~~~---~~~~K~ 83 (271)
T PF11051_consen 7 TAGDKYLWLALRLIRVLRRLGNTLPIEIIYPGDDDLSKEFCEKLLPDQDVWFVDASCVIDPDYLGKSFSKK---GFQNKW 83 (271)
T ss_pred EecCccHHHHHHHHHHHHHhCCCCCEEEEeCCccccCHHHHHHHhhhhhhheecceEEeeccccccccccC---Cchhhh
Confidence 3466999999999999999999999987776 6799988888876 2222222222221111000 1100 112455
Q ss_pred eccccccccEEEEEecceecccCcccccCCCCC-ceeee
Q 024367 108 RIWEFVEYSKMIYLDGDIQVFDNIDHLFDLPDG-YFYAV 145 (268)
Q Consensus 108 ~i~~l~~~drvlYLD~D~lv~~~l~eLf~~~~~-~iaav 145 (268)
++--...++.||+||+|.+.+.|++.||+.++. .-|++
T Consensus 84 lA~l~ssFeevllLDaD~vpl~~p~~lF~~~~yk~tG~l 122 (271)
T PF11051_consen 84 LALLFSSFEEVLLLDADNVPLVDPEKLFESEEYKKTGAL 122 (271)
T ss_pred hhhhhCCcceEEEEcCCcccccCHHHHhcCccccccCEE
Confidence 554456899999999999999999999999642 24444
No 25
>PF03407 Nucleotid_trans: Nucleotide-diphospho-sugar transferase; InterPro: IPR005069 Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases [].
Probab=98.43 E-value=2e-06 Score=71.86 Aligned_cols=174 Identities=18% Similarity=0.221 Sum_probs=93.8
Q ss_pred CCHHHHHHHHHcCCEEEEeccc--CCCCchhhhhh-ccccccchheec-cccc-cccEEEEEecceecccCcccccCCCC
Q 024367 65 VPEEHRKILIEQGCILREIEPV--YPPENQTQFAM-AYYVINYSKLRI-WEFV-EYSKMIYLDGDIQVFDNIDHLFDLPD 139 (268)
Q Consensus 65 i~~~~~~~L~~~~~~~~~v~~l--~~~~~~~~~~~-~~~~~~~~KL~i-~~l~-~~drvlYLD~D~lv~~~l~eLf~~~~ 139 (268)
++++..+.+++.+.....+... ........+.. .+...++.|..+ .+++ ..-.|+|+|+|+++++|+.++|+.++
T Consensus 11 ~D~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~L~~G~~vl~~D~Dvv~~~dp~~~~~~~~ 90 (212)
T PF03407_consen 11 LDEETYDALEELGPPCFYFPSDASESEDSAFRFGSKAFQKLTWLKPKVLLDLLELGYDVLFSDADVVWLRDPLPYFENPD 90 (212)
T ss_pred ECHHHHHHHHhcCCCeEEEecccccccchhhhcCCHHHHHHHHHHHHHHHHHHHcCCceEEecCCEEEecCcHHhhccCC
Confidence 3466677788877654433332 11111111111 122334566433 2333 33469999999999999999994444
Q ss_pred CceeeeecccccCCCCCCCcccccccccCCCCCCCCccCCCCCCCCccceEEEEecCHHHH---HHHHHHhhccCCCCCC
Q 024367 140 GYFYAVMDCFCEKTWSHTPQFKIGYCQQCPDKVKWPAELGPKPALYFNAGMFVFEPSLSTY---HDLLETVQITTPTSFA 216 (268)
Q Consensus 140 ~~iaav~d~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~g~~~~~yfNsGv~li~~~~~~~---~~l~~~~~~~~~~~~~ 216 (268)
..+....|..... .. ......+|+|++.++++.... +++.+.+... -...
T Consensus 91 ~Di~~~~d~~~~~------------------~~-------~~~~~~~n~G~~~~r~t~~~~~~~~~w~~~~~~~--~~~~ 143 (212)
T PF03407_consen 91 ADILFSSDGWDGT------------------NS-------DRNGNLVNTGFYYFRPTPRTIAFLEDWLERMAES--PGCW 143 (212)
T ss_pred CceEEecCCCccc------------------ch-------hhcCCccccceEEEecCHHHHHHHHHHHHHHHhC--CCcc
Confidence 4455444421100 00 012355799999999998553 4444444332 2335
Q ss_pred ChHHHHHHHccC--------ccccCCcccccccccccCCCcc--c--CCCceEEEeecCCC
Q 024367 217 EQDFLNMYFRDI--------YRPIPPIYNLVVAMLWRHPENV--E--ADKAKVVHYCAAVS 265 (268)
Q Consensus 217 DQd~LN~~~~~~--------~~~Lp~~yN~~~~~~~~~~~~~--~--~~~~~IiHf~g~~~ 265 (268)
||.+||.++.+. +..||...-............| . ...+.+||.+...+
T Consensus 144 DQ~~~n~~l~~~~~~~~~~~~~~L~~~~f~~g~~~f~~~~~~~~~~~~~~p~~vH~n~~~g 204 (212)
T PF03407_consen 144 DQQAFNELLREQAARYGGLRVRFLPPSLFPNGHGYFCQSRDWAWVPTKNKPYIVHANCCDG 204 (212)
T ss_pred hHHHHHHHHHhcccCCcCcEEEEeCHHHeeccccceeecchhhhhccccccceEEEcCCCC
Confidence 999999999763 3456653321111111111112 1 36899999987543
No 26
>KOG1879 consensus UDP-glucose:glycoprotein glucosyltransferase [Carbohydrate transport and metabolism]
Probab=97.94 E-value=4e-05 Score=76.51 Aligned_cols=196 Identities=15% Similarity=0.140 Sum_probs=117.2
Q ss_pred eEEEEEeecCcccHHHHHHHHHHHHhcCC-CCCEEEEECCCCCHHHHHHHHH----cCCEEEEecccCCCCchhhhh-hc
Q 024367 25 RAYVTFLAGDGDYWKGVVGLVKGLRKAKS-KYPLLVAMLPDVPEEHRKILIE----QGCILREIEPVYPPENQTQFA-MA 98 (268)
Q Consensus 25 ~a~~t~l~~d~~Y~~~~~vl~~Sl~~~~~-~~~ivvl~~~~i~~~~~~~L~~----~~~~~~~v~~l~~~~~~~~~~-~~ 98 (268)
.+-++-+++..-|=..+..++.|+.++.. ...|+ ++.+-+|+..++.+.. .+..+ +.-.+.+|.+...-. +.
T Consensus 1181 vINIFSvASGHLYERflrIMm~SvlknTktpVKFW-fLkNyLSPtFKe~iP~mA~eYnFey-Elv~YkWPrWLhqQ~EKQ 1258 (1470)
T KOG1879|consen 1181 VINIFSVASGHLYERFLRIMMLSVLKNTKTPVKFW-FLKNYLSPTFKESIPHMAKEYNFEY-ELVQYKWPRWLHQQTEKQ 1258 (1470)
T ss_pred eEEEEeeccccHHHHHHHHHHHHHHhCCCCceeEE-eehhhcChHHHHHHHHHHHHhCceE-EEEEecCchhhhhhhhhh
Confidence 56777788888999999999999998742 34455 4466788877655532 34433 222234454321111 11
Q ss_pred cccccc-hh-eecccc--ccccEEEEEecceecccCcccccCCC--CCceeeeecccccCCCCCCCcc--c-ccccccCC
Q 024367 99 YYVINY-SK-LRIWEF--VEYSKMIYLDGDIQVFDNIDHLFDLP--DGYFYAVMDCFCEKTWSHTPQF--K-IGYCQQCP 169 (268)
Q Consensus 99 ~~~~~~-~K-L~i~~l--~~~drvlYLD~D~lv~~~l~eLf~~~--~~~iaav~d~~~~~~~~~~p~~--~-~~~~~~~p 169 (268)
...| +| |++--| .+.+||||.|||-||+.||.||.+.+ +.+.|=++-|... ..+..| | .|+
T Consensus 1259 --RiiWgyKILFLDVLFPL~v~KvIfVDADQIVR~DL~EL~dfdl~GaPygYtPfCdsR---~EMDGyRFWK~GY----- 1328 (1470)
T KOG1879|consen 1259 --RIIWGYKILFLDVLFPLNVDKVIFVDADQIVRADLKELMDFDLGGAPYGYTPFCDSR---REMDGYRFWKQGY----- 1328 (1470)
T ss_pred --hhhhhhhhhhhhhccccccceEEEEcchHhhhhhhHHHHhcccCCCccccCcccccc---ccccchhHHhhhH-----
Confidence 1123 45 444434 37899999999999999999998875 4344444433211 011111 1 111
Q ss_pred CCCCCCccCCCCCCCCccceEEEEecCHHHH----HHHHH---Hhh-ccCCCCCCChHHHHHHHcc-CccccCCcccc
Q 024367 170 DKVKWPAELGPKPALYFNAGMFVFEPSLSTY----HDLLE---TVQ-ITTPTSFAEQDFLNMYFRD-IYRPIPPIYNL 238 (268)
Q Consensus 170 ~~~~~~~~~g~~~~~yfNsGv~li~~~~~~~----~~l~~---~~~-~~~~~~~~DQd~LN~~~~~-~~~~Lp~~yN~ 238 (268)
|...+ ....|-=|...|+++++-+. +++.- .+. ...++.-.|||+-|.+... .++.||..|=+
T Consensus 1329 ----W~~hL--~grkYHISALYVVDLkrFReiaAGDrLR~qYQ~LS~DPNSLsNLDQDLPNnm~hqVpIkSLPqeWLW 1400 (1470)
T KOG1879|consen 1329 ----WKKHL--RGRKYHISALYVVDLKRFREIAAGDRLRGQYQALSQDPNSLSNLDQDLPNNMQHQVPIKSLPQEWLW 1400 (1470)
T ss_pred ----HHHHh--ccCccccceeeeeeHHHHHhcccchHHHHHHHhhcCCcchhhhccccccccceeecccccCCcchhh
Confidence 11111 13588889999999986332 22221 222 2235667899999998764 68999998654
No 27
>PLN03182 xyloglucan 6-xylosyltransferase; Provisional
Probab=95.28 E-value=0.1 Score=47.27 Aligned_cols=82 Identities=16% Similarity=0.127 Sum_probs=49.2
Q ss_pred CCCCccceEEEEecCHHHHHHHHHHh--------------------hccCCCCCCChHHHHHHHc-c--Cc---cccCCc
Q 024367 182 PALYFNAGMFVFEPSLSTYHDLLETV--------------------QITTPTSFAEQDFLNMYFR-D--IY---RPIPPI 235 (268)
Q Consensus 182 ~~~yfNsGv~li~~~~~~~~~l~~~~--------------------~~~~~~~~~DQd~LN~~~~-~--~~---~~Lp~~ 235 (268)
.-...|+|+++|+...|..+-+-+++ .....+..-||.+|-+++. + +| ..|-..
T Consensus 241 dW~GLNtGsFLIRNcqWSldlLDaWa~mgp~~~~~~~~g~~l~~~l~~rp~~eaDDQSAlvyLl~~~~~~w~~kv~le~~ 320 (429)
T PLN03182 241 SWIGLNTGSFLIRNCQWSLDLLDAWAPMGPKGPIRDEAGKILTAELKGRPAFEADDQSALVYLLLTQRERWGDKVYLENS 320 (429)
T ss_pred ccCccceeeEEEEcCHHHHHHHHHHHhcCCCCchhhhHHHHHHHhhcCCCCCCcccHHHHHHHHHhcchhhccceEEeec
Confidence 34679999999999987543332211 1111355689999999873 2 23 344444
Q ss_pred cccccccccc-------------CCCcccCCCceEEEeecCCCCC
Q 024367 236 YNLVVAMLWR-------------HPENVEADKAKVVHYCAAVSTI 267 (268)
Q Consensus 236 yN~~~~~~~~-------------~~~~~~~~~~~IiHf~g~~~KP 267 (268)
|-+... |. ++..=+..-|-|.||+| .||
T Consensus 321 y~l~Gy--w~~iv~~yee~~~~~~~g~gd~rwPfvtHF~G--ckp 361 (429)
T PLN03182 321 YYLHGY--WVGLVDRYEEMMEKYHPGLGDDRWPFVTHFVG--CKP 361 (429)
T ss_pred ceeccc--cHHHHHHHHHHHHhcCCCCCCcccceeEeecc--cee
Confidence 444332 21 22222356789999999 576
No 28
>PF05637 Glyco_transf_34: galactosyl transferase GMA12/MNN10 family; InterPro: IPR008630 This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of Caenorhabditis elegans homologues where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34.; GO: 0016758 transferase activity, transferring hexosyl groups, 0016021 integral to membrane; PDB: 2P72_B 2P73_A 2P6W_A.
Probab=94.54 E-value=0.02 Score=48.75 Aligned_cols=79 Identities=19% Similarity=0.153 Sum_probs=0.0
Q ss_pred CCCCCccceEEEEecCHHHHHHHHHHhhcc----CC---CCCCChHHHHHHHcc------CccccCCcc-cccccccccC
Q 024367 181 KPALYFNAGMFVFEPSLSTYHDLLETVQIT----TP---TSFAEQDFLNMYFRD------IYRPIPPIY-NLVVAMLWRH 246 (268)
Q Consensus 181 ~~~~yfNsGv~li~~~~~~~~~l~~~~~~~----~~---~~~~DQd~LN~~~~~------~~~~Lp~~y-N~~~~~~~~~ 246 (268)
.....+|+|+++++.+.+.. .+++.+... .. ..+.||++|-.+++. +...+|.++ |..... .
T Consensus 140 ~d~~gLNtGsFliRns~ws~-~fLd~w~~~~~~~~~~~~~~~~EQsAl~~ll~~~~~~~~~~~~vpq~~~nsy~~~---~ 215 (239)
T PF05637_consen 140 QDWNGLNTGSFLIRNSPWSR-DFLDAWADPLYRNYDWDQLEFDEQSALEHLLQWHPEILSKVALVPQRWFNSYPED---E 215 (239)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccccccccccccccccccc---c
Confidence 35688999999999998764 344443221 11 246899999888764 345666432 322111 0
Q ss_pred CCcccCCCceEEEeecC
Q 024367 247 PENVEADKAKVVHYCAA 263 (268)
Q Consensus 247 ~~~~~~~~~~IiHf~g~ 263 (268)
......+..-|+||+|.
T Consensus 216 ~~~~~~~GDfvvhfaGC 232 (239)
T PF05637_consen 216 CNYQYKEGDFVVHFAGC 232 (239)
T ss_dssp -----------------
T ss_pred ccccccccccccccccc
Confidence 11112456689999995
No 29
>PF07801 DUF1647: Protein of unknown function (DUF1647); InterPro: IPR012444 This entry consists of hypothetical proteins of unknown function.
Probab=92.18 E-value=1.1 Score=34.85 Aligned_cols=53 Identities=15% Similarity=0.191 Sum_probs=43.7
Q ss_pred CCCCeEEEEEeecCcccHHHHHHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHHc
Q 024367 21 SLPKRAYVTFLAGDGDYWKGVVGLVKGLRKAKSKYPLLVAMLPDVPEEHRKILIEQ 76 (268)
Q Consensus 21 ~~~~~a~~t~l~~d~~Y~~~~~vl~~Sl~~~~~~~~ivvl~~~~i~~~~~~~L~~~ 76 (268)
..+..++|+ ++.+++...+.-++.|++++.|+..++ +++=+++++.++.|++.
T Consensus 58 n~~~vvfVS--a~S~~h~~~~~~~i~si~~~~P~~k~i-lY~LgL~~~~i~~L~~~ 110 (142)
T PF07801_consen 58 NSSDVVFVS--ATSDNHFNESMKSISSIRKFYPNHKII-LYDLGLSEEQIKKLKKN 110 (142)
T ss_pred cCCccEEEE--EecchHHHHHHHHHHHHHHHCCCCcEE-EEeCCCCHHHHHHHHhc
Confidence 444666777 457889999999999999999988765 78889999999999874
No 30
>KOG1928 consensus Alpha-1,4-N-acetylglucosaminyltransferase [Carbohydrate transport and metabolism]
Probab=91.79 E-value=0.16 Score=45.53 Aligned_cols=73 Identities=16% Similarity=0.183 Sum_probs=46.1
Q ss_pred EEEEecceecccCcccccCCCCCceeeeecccccCCCCCCCcccccccccCCCCCCCCccCCCCCCCCccceEEEEecCH
Q 024367 118 MIYLDGDIQVFDNIDHLFDLPDGYFYAVMDCFCEKTWSHTPQFKIGYCQQCPDKVKWPAELGPKPALYFNAGMFVFEPSL 197 (268)
Q Consensus 118 vlYLD~D~lv~~~l~eLf~~~~~~iaav~d~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~g~~~~~yfNsGv~li~~~~ 197 (268)
=||||+|+||++++..|=+. |+ + +.. .. .-.+-|.+||.++..-
T Consensus 241 GvYLDTDvIvLksl~~l~N~----ig-~-~~~---------------------~~---------~~~~lnnavl~F~k~H 284 (409)
T KOG1928|consen 241 GVYLDTDVIVLKSLSNLRNV----IG-V-DPA---------------------TQ---------AWTRLNNAVLIFDKNH 284 (409)
T ss_pred CEEeeccEEEeccccccccc----cc-c-cch---------------------hh---------HHHhhcCceeecCCCC
Confidence 38999999999999988764 33 1 100 00 1256789999999886
Q ss_pred HH-HHHHHHHhhccCCCC--CCChHHHHHHHc
Q 024367 198 ST-YHDLLETVQITTPTS--FAEQDFLNMYFR 226 (268)
Q Consensus 198 ~~-~~~l~~~~~~~~~~~--~~DQd~LN~~~~ 226 (268)
.. .+.+.|+...++... ..-.+++..+++
T Consensus 285 pfl~~cl~eF~~tfNg~~WG~NGP~LvTRVak 316 (409)
T KOG1928|consen 285 PFLLECLREFALTYNGNIWGHNGPYLVTRVAK 316 (409)
T ss_pred HHHHHHHHHHHHhccccccccCCcHHHHHHHH
Confidence 44 344555655554333 344467776665
No 31
>PLN03181 glycosyltransferase; Provisional
Probab=91.62 E-value=0.42 Score=43.57 Aligned_cols=28 Identities=21% Similarity=0.260 Sum_probs=20.6
Q ss_pred cchheeccc-----cccccEEEEEecceecccC
Q 024367 103 NYSKLRIWE-----FVEYSKMIYLDGDIQVFDN 130 (268)
Q Consensus 103 ~~~KL~i~~-----l~~~drvlYLD~D~lv~~~ 130 (268)
.|.|+.+-+ .++.+-+-|||+|++|.+.
T Consensus 182 ~WaKipalRaAM~a~PeAEWfWWLDsDALIMNp 214 (453)
T PLN03181 182 YWAKLPVVRAAMLAHPEAEWIWWVDSDAVFTDM 214 (453)
T ss_pred hhhHHHHHHHHHHHCCCceEEEEecCCceeecC
Confidence 466653333 3468899999999999876
No 32
>cd02515 Glyco_transf_6 Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO blood group antigens. Glycosyltransferase family 6, GT_6, comprises enzymes with three known activities: alpha-1,3-galactosyltransferase, alpha-1,3 N-acetylgalactosaminyltransferase, and alpha-galactosyltransferase. UDP-galactose:beta-galactosyl alpha-1,3-galactosyltransferase (alpha3GT) catalyzes the transfer of galactose from UDP-alpha-d-galactose into an alpha-1,3 linkage with beta-galactosyl groups in glycoconjugates. The enzyme exists in most mammalian species but is absent from humans, apes, and old world monkeys as a result of the mutational inactivation of the gene. The alpha-1,3 N-acetylgalactosaminyltransferase and alpha-galactosyltransferase are responsible for the production of the human ABO blood group antigens. A N-acetylgalactosaminyltransferases use a UDP-GalNAc donor to convert the H-antigen acceptor to the A antigen, whereas a galactosyltransferase use
Probab=90.06 E-value=1.9 Score=37.09 Aligned_cols=185 Identities=13% Similarity=0.159 Sum_probs=89.6
Q ss_pred EEeecCcccHHHHHHHHHHHHhcC-CCCCE-EEEECCCCCHHHHHHHHH-cCCEEEEecccCCCCchhhhhhccccccch
Q 024367 29 TFLAGDGDYWKGVVGLVKGLRKAK-SKYPL-LVAMLPDVPEEHRKILIE-QGCILREIEPVYPPENQTQFAMAYYVINYS 105 (268)
Q Consensus 29 t~l~~d~~Y~~~~~vl~~Sl~~~~-~~~~i-vvl~~~~i~~~~~~~L~~-~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~ 105 (268)
+++| -..|.....-.+.|-.++- +++++ +++.+|.-..--.-.|.. ....+..+ . +. .++...+..
T Consensus 39 ~vfa-tGkY~~f~~~F~~SAEk~Fm~g~~v~YyVFTD~~~~~p~v~lg~~r~~~V~~v---~--~~-----~~W~~~sl~ 107 (271)
T cd02515 39 TVFA-VGKYTEFLERFLESAEKHFMVGYRVIYYIFTDKPAAVPEVELGPGRRLTVLKI---A--EE-----SRWQDISMR 107 (271)
T ss_pred EEEE-eccHHHHHHHHHHHHHHhccCCCeeEEEEEeCCcccCcccccCCCceeEEEEe---c--cc-----cCCcHHHHH
Confidence 4454 4789999999999988763 45554 335565322100001100 01122222 1 00 111223445
Q ss_pred heecc-----cc--ccccEEEEEecceecccCcc-cccCCCCCceeeeeccccc-C----CCCCCCcccccccccCCCCC
Q 024367 106 KLRIW-----EF--VEYSKMIYLDGDIQVFDNID-HLFDLPDGYFYAVMDCFCE-K----TWSHTPQFKIGYCQQCPDKV 172 (268)
Q Consensus 106 KL~i~-----~l--~~~drvlYLD~D~lv~~~l~-eLf~~~~~~iaav~d~~~~-~----~~~~~p~~~~~~~~~~p~~~ 172 (268)
|+-++ +. .++|=+.++|+|+++.+++. |.+. ..+|...--.-. + ++...|+ .... +
T Consensus 108 Rm~~~~~~~~~~~~~e~DYlF~~dvd~~F~~~ig~E~Lg---~lva~lHp~~y~~~~~~fpYERrp~----S~Ay----I 176 (271)
T cd02515 108 RMKTLADHIADRIGHEVDYLFCMDVDMVFQGPFGVETLG---DSVAQLHPWWYGKPRKQFPYERRPS----SAAY----I 176 (271)
T ss_pred HHHHHHHHHHHhhcccCCEEEEeeCCceEeecCCHHHhh---hhheecChhhhcCCCCCCCCcCCCC----cccc----c
Confidence 54443 22 37899999999999999887 3331 112222110000 0 0111100 0000 1
Q ss_pred CCCccCCCCCCCCccceEEEEecCH------HHHHHHHHHhhccCCCCCCChHHHHHHHccC--ccccCCcccccc
Q 024367 173 KWPAELGPKPALYFNAGMFVFEPSL------STYHDLLETVQITTPTSFAEQDFLNMYFRDI--YRPIPPIYNLVV 240 (268)
Q Consensus 173 ~~~~~~g~~~~~yfNsGv~li~~~~------~~~~~l~~~~~~~~~~~~~DQd~LN~~~~~~--~~~Lp~~yN~~~ 240 (268)
|.. ...-||-+|+.-=.+.. .-.+.+++-.++.-...++|..-||.+|-.+ .+.||+.|++..
T Consensus 177 --p~~---eGdfYy~Ga~~GG~~~~vl~l~~~c~~~i~~D~~n~I~A~wHDESHLNkYf~~~Kp~KiLSPeY~w~e 247 (271)
T cd02515 177 --PEG---EGDFYYHGAVFGGSVEEVYRLTRACHEGILADKANGIEARWHDESHLNKYFLLHKPTKVLSPEYLWDD 247 (271)
T ss_pred --cCC---CCCeEEeeeecCccHHHHHHHHHHHHHHHHHHHhCCceEEeecHhHhHHHHhhCCCCeecChhhcCCc
Confidence 111 23466666666444432 1112222222222234689999999998643 789999999764
No 33
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=80.54 E-value=9.6 Score=29.06 Aligned_cols=81 Identities=11% Similarity=0.035 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHhcC-CCCCEEEEECCCCCHHHHHHHHHcCCEEEEecccCCCCchhhhhhccccccchheecccccccc
Q 024367 38 WKGVVGLVKGLRKAK-SKYPLLVAMLPDVPEEHRKILIEQGCILREIEPVYPPENQTQFAMAYYVINYSKLRIWEFVEYS 116 (268)
Q Consensus 38 ~~~~~vl~~Sl~~~~-~~~~ivvl~~~~i~~~~~~~L~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~KL~i~~l~~~d 116 (268)
...+.-++.||.+.. +...++ ++.++-.++..+.+++.... +..+..+++. .. ...+-...+..+.+
T Consensus 9 ~~~l~~~l~sl~~~~~~~~~ii-ivdd~s~~~~~~~~~~~~~~---~~~~~~~~~~-g~-------~~a~n~~~~~~~~~ 76 (166)
T cd04186 9 LEYLKACLDSLLAQTYPDFEVI-VVDNASTDGSVELLRELFPE---VRLIRNGENL-GF-------GAGNNQGIREAKGD 76 (166)
T ss_pred HHHHHHHHHHHHhccCCCeEEE-EEECCCCchHHHHHHHhCCC---eEEEecCCCc-Ch-------HHHhhHHHhhCCCC
Confidence 566778888998764 334444 55566565666666655431 1111111111 01 11122222223788
Q ss_pred EEEEEecceecccC
Q 024367 117 KMIYLDGDIQVFDN 130 (268)
Q Consensus 117 rvlYLD~D~lv~~~ 130 (268)
-++++|+|..+..+
T Consensus 77 ~i~~~D~D~~~~~~ 90 (166)
T cd04186 77 YVLLLNPDTVVEPG 90 (166)
T ss_pred EEEEECCCcEECcc
Confidence 99999999987654
No 34
>PF04488 Gly_transf_sug: Glycosyltransferase sugar-binding region containing DXD motif ; InterPro: IPR007577 This entry represents those sugar-binding regions of glycosyltransferases that contain a DXD motif. The DXD motif is a short conserved motif found in many families of glycosyltransferases, which add a range of different sugars to other sugars, phosphates and proteins. DXD-containing glycosyltransferases all use nucleoside diphosphate sugars as donors and require divalent cations, usually manganese. The DXD motif is expected to play a carbohydrate binding role in sugar-nucleoside diphosphate and manganese dependent glycosyltransferases [].
Probab=79.15 E-value=1 Score=32.85 Aligned_cols=19 Identities=32% Similarity=0.475 Sum_probs=16.2
Q ss_pred EEEecceecccCc-ccccCC
Q 024367 119 IYLDGDIQVFDNI-DHLFDL 137 (268)
Q Consensus 119 lYLD~D~lv~~~l-~eLf~~ 137 (268)
+|+|.|+++++++ +++...
T Consensus 80 iY~D~D~~~~rpl~~~~~~~ 99 (103)
T PF04488_consen 80 IYLDLDVICLRPLDDPWLPE 99 (103)
T ss_pred EEEeCccccCcchhhhhhcc
Confidence 7999999999999 776543
No 35
>PRK15384 type III secretion system protein; Provisional
Probab=74.31 E-value=2.9 Score=35.40 Aligned_cols=31 Identities=19% Similarity=0.360 Sum_probs=23.9
Q ss_pred ccEEEEEecceecccCcccccCCCCCceeeeec
Q 024367 115 YSKMIYLDGDIQVFDNIDHLFDLPDGYFYAVMD 147 (268)
Q Consensus 115 ~drvlYLD~D~lv~~~l~eLf~~~~~~iaav~d 147 (268)
..-+||||+||++.+.|.-|+.-++ ||.-.|
T Consensus 216 ~~GCIYLDaDMilT~KLG~ly~PDG--IavhV~ 246 (336)
T PRK15384 216 NSGCIYLDADMIITEKLGGIYIPDG--IAVHVE 246 (336)
T ss_pred CCceEEeeccceeecccccEEcCCc--eEEEEE
Confidence 4679999999999999998885444 554444
No 36
>PRK15382 non-LEE encoded effector protein NleB; Provisional
Probab=74.25 E-value=3 Score=35.30 Aligned_cols=31 Identities=26% Similarity=0.435 Sum_probs=24.0
Q ss_pred ccEEEEEecceecccCcccccCCCCCceeeeec
Q 024367 115 YSKMIYLDGDIQVFDNIDHLFDLPDGYFYAVMD 147 (268)
Q Consensus 115 ~drvlYLD~D~lv~~~l~eLf~~~~~~iaav~d 147 (268)
.+-+||||+||++.+.|.-|+.-++ ||.-.|
T Consensus 211 ~~GCIYLD~DMilT~KLG~ly~PDG--IavhV~ 241 (326)
T PRK15382 211 CEGCIYLDADMIITDKLGVLYAPDG--IAVHVD 241 (326)
T ss_pred CCceEEeecceeeecccccEEcCCc--eEEEEE
Confidence 4679999999999999998885444 554444
No 37
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=73.12 E-value=9.2 Score=28.20 Aligned_cols=82 Identities=12% Similarity=0.079 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHhcCC-CCCEEEEECCCCCHHHHHHHHHcCC---EEEEecccCCCCchhhhhhccccccchheeccccc
Q 024367 38 WKGVVGLVKGLRKAKS-KYPLLVAMLPDVPEEHRKILIEQGC---ILREIEPVYPPENQTQFAMAYYVINYSKLRIWEFV 113 (268)
Q Consensus 38 ~~~~~vl~~Sl~~~~~-~~~ivvl~~~~i~~~~~~~L~~~~~---~~~~v~~l~~~~~~~~~~~~~~~~~~~KL~i~~l~ 113 (268)
...+..++.|+.+... ...++ +++++-+++..+.+.+... ....+.. .... .. ...+-.+....
T Consensus 9 ~~~l~~~l~s~~~~~~~~~~i~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-g~-------~~~~~~~~~~~ 76 (156)
T cd00761 9 EPYLERCLESLLAQTYPNFEVI-VVDDGSTDGTLEILEEYAKKDPRVIRVIN---EENQ-GL-------AAARNAGLKAA 76 (156)
T ss_pred HHHHHHHHHHHHhCCccceEEE-EEeCCCCccHHHHHHHHHhcCCCeEEEEe---cCCC-Ch-------HHHHHHHHHHh
Confidence 4667788888887653 34555 4555555555555544322 1111111 0010 00 01111122222
Q ss_pred cccEEEEEecceecccCc
Q 024367 114 EYSKMIYLDGDIQVFDNI 131 (268)
Q Consensus 114 ~~drvlYLD~D~lv~~~l 131 (268)
+.+.++++|+|.++..+.
T Consensus 77 ~~d~v~~~d~D~~~~~~~ 94 (156)
T cd00761 77 RGEYILFLDADDLLLPDW 94 (156)
T ss_pred cCCEEEEECCCCccCccH
Confidence 789999999999987663
No 38
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=73.10 E-value=12 Score=34.07 Aligned_cols=22 Identities=18% Similarity=0.235 Sum_probs=16.9
Q ss_pred ccEEEEEecceecccC-cccccC
Q 024367 115 YSKMIYLDGDIQVFDN-IDHLFD 136 (268)
Q Consensus 115 ~drvlYLD~D~lv~~~-l~eLf~ 136 (268)
.|-++++|+|+.+-.+ +.++..
T Consensus 134 gd~llflDaD~~~~p~~l~~lv~ 156 (384)
T TIGR03469 134 ADYLLLTDADIAHGPDNLARLVA 156 (384)
T ss_pred CCEEEEECCCCCCChhHHHHHHH
Confidence 7899999999998544 455554
No 39
>PRK15383 type III secretion system protein; Provisional
Probab=73.05 E-value=3.3 Score=35.04 Aligned_cols=31 Identities=23% Similarity=0.313 Sum_probs=23.9
Q ss_pred ccEEEEEecceecccCcccccCCCCCceeeeec
Q 024367 115 YSKMIYLDGDIQVFDNIDHLFDLPDGYFYAVMD 147 (268)
Q Consensus 115 ~drvlYLD~D~lv~~~l~eLf~~~~~~iaav~d 147 (268)
-.-+||||+||++.+.|.-|+.-++ ||.-.|
T Consensus 219 ~~GCIYLD~DMilT~KLG~ly~PDG--IavhV~ 249 (335)
T PRK15383 219 GGGCIYLDADMLLTDKLGTLYLPDG--IAIHVS 249 (335)
T ss_pred CCceEEeecceeeecccccEEcCCc--eEEEEE
Confidence 4679999999999999998885444 554444
No 40
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=72.63 E-value=7.6 Score=32.43 Aligned_cols=108 Identities=11% Similarity=0.112 Sum_probs=53.2
Q ss_pred ccCCCCCCCeEEEEEeecCcccHHHHHHHHHHHHhcC-CC--CCEEEEECCCCCHHHHHHHHHcCCEEEEecccCCCCch
Q 024367 16 LSKAPSLPKRAYVTFLAGDGDYWKGVVGLVKGLRKAK-SK--YPLLVAMLPDVPEEHRKILIEQGCILREIEPVYPPENQ 92 (268)
Q Consensus 16 ~~~~~~~~~~a~~t~l~~d~~Y~~~~~vl~~Sl~~~~-~~--~~ivvl~~~~i~~~~~~~L~~~~~~~~~v~~l~~~~~~ 92 (268)
.+.....++...++ .+.|+. ..+..++.|+.... ++ ..++ ++.++-++...+.+++.... .+..+..+.+.
T Consensus 22 ~~~~~~~~~isVvi-p~~n~~--~~l~~~l~si~~q~~~~~~~eii-vvdd~s~d~t~~~~~~~~~~--~v~~i~~~~~~ 95 (251)
T cd06439 22 LPDPAYLPTVTIII-PAYNEE--AVIEAKLENLLALDYPRDRLEII-VVSDGSTDGTAEIAREYADK--GVKLLRFPERR 95 (251)
T ss_pred CCCCCCCCEEEEEE-ecCCcH--HHHHHHHHHHHhCcCCCCcEEEE-EEECCCCccHHHHHHHHhhC--cEEEEEcCCCC
Confidence 34444455555544 333433 55667788887643 23 3344 45565555555555554321 11121111111
Q ss_pred hhhhhccccccchheeccccccccEEEEEecceecccC-cccccCC
Q 024367 93 TQFAMAYYVINYSKLRIWEFVEYSKMIYLDGDIQVFDN-IDHLFDL 137 (268)
Q Consensus 93 ~~~~~~~~~~~~~KL~i~~l~~~drvlYLD~D~lv~~~-l~eLf~~ 137 (268)
. . ...+-...+....|=++++|+|+++..+ +.++++.
T Consensus 96 g-~-------~~a~n~gi~~a~~d~i~~lD~D~~~~~~~l~~l~~~ 133 (251)
T cd06439 96 G-K-------AAALNRALALATGEIVVFTDANALLDPDALRLLVRH 133 (251)
T ss_pred C-h-------HHHHHHHHHHcCCCEEEEEccccCcCHHHHHHHHHH
Confidence 0 0 1111111122345889999999999755 5555554
No 41
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=71.52 E-value=13 Score=30.79 Aligned_cols=88 Identities=14% Similarity=0.015 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHhcCC---CCCEEEEECCCCCHHHHHHHHHcCCEEEEecccCCCCchhhhhhccccccchheecccccc
Q 024367 38 WKGVVGLVKGLRKAKS---KYPLLVAMLPDVPEEHRKILIEQGCILREIEPVYPPENQTQFAMAYYVINYSKLRIWEFVE 114 (268)
Q Consensus 38 ~~~~~vl~~Sl~~~~~---~~~ivvl~~~~i~~~~~~~L~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~KL~i~~l~~ 114 (268)
-..+.-++.|+.+... +++++ ++.++-+++..+.+++.......+..+..... ... -.+-...+...
T Consensus 12 ~~~l~~~l~sl~~q~~~~~~~evi-vvd~~s~d~~~~~~~~~~~~~~~v~~i~~~~~--~~~-------~a~N~g~~~a~ 81 (249)
T cd02525 12 EKYIEELLESLLNQSYPKDLIEII-VVDGGSTDGTREIVQEYAAKDPRIRLIDNPKR--IQS-------AGLNIGIRNSR 81 (249)
T ss_pred hhhHHHHHHHHHhccCCCCccEEE-EEeCCCCccHHHHHHHHHhcCCeEEEEeCCCC--Cch-------HHHHHHHHHhC
Confidence 3456667888876543 34454 45555555555555544321111222221111 010 01111122236
Q ss_pred ccEEEEEecceecccC-ccccc
Q 024367 115 YSKMIYLDGDIQVFDN-IDHLF 135 (268)
Q Consensus 115 ~drvlYLD~D~lv~~~-l~eLf 135 (268)
.|-++++|+|.++..+ +..+.
T Consensus 82 ~d~v~~lD~D~~~~~~~l~~~~ 103 (249)
T cd02525 82 GDIIIRVDAHAVYPKDYILELV 103 (249)
T ss_pred CCEEEEECCCccCCHHHHHHHH
Confidence 7889999999987544 45554
No 42
>PF05704 Caps_synth: Capsular polysaccharide synthesis protein; InterPro: IPR008441 This entry consists of several capsular polysaccharide proteins. Capsular polysaccharide (CPS) is a major virulence factor in Streptococcus pneumoniae. This family is often transcribed with putative glycosyl transferases to give rise to bifunctional proteins [].
Probab=70.19 E-value=13 Score=32.45 Aligned_cols=96 Identities=13% Similarity=0.213 Sum_probs=53.5
Q ss_pred CCCCeEEEEEeecCcccHHHHHHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHHcCCEEEEecccCCCCch-hhhhh--
Q 024367 21 SLPKRAYVTFLAGDGDYWKGVVGLVKGLRKAKSKYPLLVAMLPDVPEEHRKILIEQGCILREIEPVYPPENQ-TQFAM-- 97 (268)
Q Consensus 21 ~~~~~a~~t~l~~d~~Y~~~~~vl~~Sl~~~~~~~~ivvl~~~~i~~~~~~~L~~~~~~~~~v~~l~~~~~~-~~~~~-- 97 (268)
..++.+|+.-.-+-++-=.-+...+.|++++.+++.++++ +. ++ ++.. + +.|+.. +.+..
T Consensus 43 ~~~k~IW~~W~QG~e~aP~~Vk~ci~s~~k~~~~~~Vi~l-t~----~N---i~~Y-v--------~~P~~i~~k~~~g~ 105 (276)
T PF05704_consen 43 TNEKIIWVCWWQGEENAPEIVKKCINSWRKNAPDYEVILL-TE----DN---IKDY-V--------DIPDFILEKYEKGK 105 (276)
T ss_pred CCCCcEEEEECCCccccCHHHHHHHHHHHHHCCCCeEEEE-Ch----HH---HHHH-c--------CCchhHHHHHHcCC
Confidence 3445588776644444433468999999999999988754 42 12 1211 0 111100 01110
Q ss_pred --ccccccchheeccccccccEEEEEecceecccCcccccC
Q 024367 98 --AYYVINYSKLRIWEFVEYSKMIYLDGDIQVFDNIDHLFD 136 (268)
Q Consensus 98 --~~~~~~~~KL~i~~l~~~drvlYLD~D~lv~~~l~eLf~ 136 (268)
....+-+.|+.+-. .| -=+|+||++++.+++++.+.
T Consensus 106 i~~a~~SDilR~~LL~--~y-GGvWiDatv~~t~~l~~~~~ 143 (276)
T PF05704_consen 106 ISPAHFSDILRLALLY--KY-GGVWIDATVYLTKPLDDEIF 143 (276)
T ss_pred CchhHHHHHHHHHHHH--Hc-CcEEeCCceEECCchhHHHh
Confidence 00112345655432 33 23799999999999997765
No 43
>PF03314 DUF273: Protein of unknown function, DUF273; InterPro: IPR004988 This is a family of proteins of unknown function.
Probab=69.75 E-value=14 Score=30.69 Aligned_cols=84 Identities=15% Similarity=0.303 Sum_probs=50.1
Q ss_pred cccccEEEEEecceecccCcccccCC-CCCceeeeecccccCCCCCCCcccccccccCCCCCCCCccCCCCCCCCccceE
Q 024367 112 FVEYSKMIYLDGDIQVFDNIDHLFDL-PDGYFYAVMDCFCEKTWSHTPQFKIGYCQQCPDKVKWPAELGPKPALYFNAGM 190 (268)
Q Consensus 112 l~~~drvlYLD~D~lv~~~l~eLf~~-~~~~iaav~d~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~g~~~~~yfNsGv 190 (268)
|.+++-||+||+||-|.++=.-+-+. +++ +..+. .+ +.. ..-+.+|-
T Consensus 39 L~~~~~vlflDaDigVvNp~~~iEefid~~-~Di~f---yd-------------------R~~---------n~Ei~ags 86 (222)
T PF03314_consen 39 LPEYDWVLFLDADIGVVNPNRRIEEFIDEG-YDIIF---YD-------------------RFF---------NWEIAAGS 86 (222)
T ss_pred hccCCEEEEEcCCceeecCcccHHHhcCCC-CcEEE---Ee-------------------ccc---------chhhhhcc
Confidence 35799999999999999874444332 221 11110 00 010 13356788
Q ss_pred EEEecCHHHHHHHHHHhhc----cCCCCCCChHHHHHHHcc
Q 024367 191 FVFEPSLSTYHDLLETVQI----TTPTSFAEQDFLNMYFRD 227 (268)
Q Consensus 191 ~li~~~~~~~~~l~~~~~~----~~~~~~~DQd~LN~~~~~ 227 (268)
.+++...+..+-+.+++.- ..++...|-++|-.++.+
T Consensus 87 YlvkNT~~~~~fl~~~a~~E~~lP~sfhGtDNGAlH~~L~e 127 (222)
T PF03314_consen 87 YLVKNTEYSRDFLKEWADYEFKLPNSFHGTDNGALHIFLAE 127 (222)
T ss_pred ceeeCCHHHHHHHHHHhhhCccCCCccccCccHHHHHHHHH
Confidence 8888887665555555431 123456899998888775
No 44
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=69.19 E-value=18 Score=27.39 Aligned_cols=87 Identities=16% Similarity=0.127 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHhcC-CCCCEEEEECCCCCHHHHHHHHHcCCEE-EEecccCCCCchhhhhhccccccchheecccccccc
Q 024367 39 KGVVGLVKGLRKAK-SKYPLLVAMLPDVPEEHRKILIEQGCIL-REIEPVYPPENQTQFAMAYYVINYSKLRIWEFVEYS 116 (268)
Q Consensus 39 ~~~~vl~~Sl~~~~-~~~~ivvl~~~~i~~~~~~~L~~~~~~~-~~v~~l~~~~~~~~~~~~~~~~~~~KL~i~~l~~~d 116 (268)
..+.-++.||++.. +...++ ++.++-+++..+.+++..... ..+..+...++. ... -.+-...+....+
T Consensus 10 ~~l~~~l~sl~~q~~~~~~ii-vvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~-g~~-------~~~n~~~~~~~~~ 80 (180)
T cd06423 10 AVIERTIESLLALDYPKLEVI-VVDDGSTDDTLEILEELAALYIRRVLVVRDKENG-GKA-------GALNAGLRHAKGD 80 (180)
T ss_pred HHHHHHHHHHHhCCCCceEEE-EEeCCCccchHHHHHHHhccccceEEEEEecccC-Cch-------HHHHHHHHhcCCC
Confidence 66777888988764 344554 455555555555555432210 001111111110 010 1111122223678
Q ss_pred EEEEEecceecccC-cccc
Q 024367 117 KMIYLDGDIQVFDN-IDHL 134 (268)
Q Consensus 117 rvlYLD~D~lv~~~-l~eL 134 (268)
-++++|+|.++..+ +.++
T Consensus 81 ~i~~~D~D~~~~~~~l~~~ 99 (180)
T cd06423 81 IVVVLDADTILEPDALKRL 99 (180)
T ss_pred EEEEECCCCCcChHHHHHH
Confidence 89999999999766 5555
No 45
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=68.07 E-value=3 Score=31.77 Aligned_cols=87 Identities=18% Similarity=0.270 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHhc-CCCCCEEEEECCCCCHHHHHHHHHc---CCEEEEecccCCCCchhhhhhccccccchheecccccc
Q 024367 39 KGVVGLVKGLRKA-KSKYPLLVAMLPDVPEEHRKILIEQ---GCILREIEPVYPPENQTQFAMAYYVINYSKLRIWEFVE 114 (268)
Q Consensus 39 ~~~~vl~~Sl~~~-~~~~~ivvl~~~~i~~~~~~~L~~~---~~~~~~v~~l~~~~~~~~~~~~~~~~~~~KL~i~~l~~ 114 (268)
..+.-++.||++. .....++ ++.++-+++..+.+++. ...+. .+..+++. .+. ..+-...+...
T Consensus 11 ~~l~~~l~sl~~q~~~~~eii-vvdd~s~d~~~~~~~~~~~~~~~i~---~i~~~~n~-g~~-------~~~n~~~~~a~ 78 (169)
T PF00535_consen 11 EYLERTLESLLKQTDPDFEII-VVDDGSTDETEEILEEYAESDPNIR---YIRNPENL-GFS-------AARNRGIKHAK 78 (169)
T ss_dssp TTHHHHHHHHHHHSGCEEEEE-EEECS-SSSHHHHHHHHHCCSTTEE---EEEHCCCS-HHH-------HHHHHHHHH--
T ss_pred HHHHHHHHHHhhccCCCEEEE-Eeccccccccccccccccccccccc---cccccccc-ccc-------ccccccccccc
Confidence 3344566677665 2333444 44555556666666654 22221 11111111 111 12222333345
Q ss_pred ccEEEEEecceecccC-cccccCC
Q 024367 115 YSKMIYLDGDIQVFDN-IDHLFDL 137 (268)
Q Consensus 115 ~drvlYLD~D~lv~~~-l~eLf~~ 137 (268)
.+-++++|+|.++..+ +.+|.+.
T Consensus 79 ~~~i~~ld~D~~~~~~~l~~l~~~ 102 (169)
T PF00535_consen 79 GEYILFLDDDDIISPDWLEELVEA 102 (169)
T ss_dssp SSEEEEEETTEEE-TTHHHHHHHH
T ss_pred eeEEEEeCCCceEcHHHHHHHHHH
Confidence 5689999999999988 7777775
No 46
>PF03414 Glyco_transf_6: Glycosyltransferase family 6; InterPro: IPR005076 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 6 GT6 from CAZY comprises enzymes with three known activities; alpha-1,3-galactosyltransferase (2.4.1.151 from EC); alpha-1,3 N-acetylgalactosaminyltransferase (2.4.1.40 from EC); alpha-galactosyltransferase (2.4.1.37 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0016020 membrane; PDB: 2Y7A_B 2O1G_A 1R82_A 2RJ1_A 3IOJ_B 2RJ4_A 3I0C_A 3SX8_A 1ZJ1_A 3I0E_A ....
Probab=67.59 E-value=13 Score=33.11 Aligned_cols=191 Identities=14% Similarity=0.193 Sum_probs=82.6
Q ss_pred EeecCcccHHHHHHHHHHHHhc-CCCCCEE-EEECCCCCHHHHHHHHHcCCEEEEecccCCCCchhhhhhccccccchhe
Q 024367 30 FLAGDGDYWKGVVGLVKGLRKA-KSKYPLL-VAMLPDVPEEHRKILIEQGCILREIEPVYPPENQTQFAMAYYVINYSKL 107 (268)
Q Consensus 30 ~l~~d~~Y~~~~~vl~~Sl~~~-~~~~~iv-vl~~~~i~~~~~~~L~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~KL 107 (268)
++| -..|...+.-.+.|-.++ -+++++. ++.+|..+.--.-.|.. +-+ ..|-.+. +. .++...+..|+
T Consensus 105 vfA-~GkY~~fl~~Fl~SAek~Fm~g~~V~YYVFTD~p~~vP~i~l~~-~r~-~~V~~v~--~~-----~~Wqd~sm~Rm 174 (337)
T PF03414_consen 105 VFA-TGKYIVFLKDFLESAEKHFMVGHRVIYYVFTDQPSKVPRIELGP-GRR-LKVFEVQ--EE-----KRWQDISMMRM 174 (337)
T ss_dssp EEE--CCHHHHHHHHHHHHHHHBSTTSEEEEEEEES-GGGS------T-TEE-EEEEE-S--GG-----SSHHHHHHHHH
T ss_pred EEe-cccHHHHHHHHHHhHHHhccCCcEEEEEEEeCchhhCCccccCC-Cce-eEEEEec--cc-----CCCccchhHHH
Confidence 344 478999999999998876 3455543 35565432100011111 111 1111111 10 01111233443
Q ss_pred eccc------c-ccccEEEEEecceecccCcc-cccCCCCCceeeeecccccCCCCCCCcccccccccCCC-CCCCCccC
Q 024367 108 RIWE------F-VEYSKMIYLDGDIQVFDNID-HLFDLPDGYFYAVMDCFCEKTWSHTPQFKIGYCQQCPD-KVKWPAEL 178 (268)
Q Consensus 108 ~i~~------l-~~~drvlYLD~D~lv~~~l~-eLf~~~~~~iaav~d~~~~~~~~~~p~~~~~~~~~~p~-~~~~~~~~ 178 (268)
.+.. + .+.|=+..+|+|+++.+++. |.+ +..+|...- .+-+.+.....+ ...|. ..-.|...
T Consensus 175 ~~i~~~i~~~~~~EvDYLFc~dvd~~F~~~vGvE~L---g~lva~LHp-----~~y~~~~~~FpY-ERrp~S~AyIp~~e 245 (337)
T PF03414_consen 175 EMISEHIEQHIQHEVDYLFCMDVDMVFQDHVGVEIL---GDLVATLHP-----WFYFKPRESFPY-ERRPKSQAYIPYGE 245 (337)
T ss_dssp HHHHHHHHHCHHHH-SEEEEEESSEEE-S-B-GGG----SSEEEEEST-----TTTTSTGGGS---B-STTSTTB--TT-
T ss_pred HHHHHHHHHHHhhcCCEEEEEecceEEecccCHHHH---HHHHHHhCH-----HHHCCChhhCcc-ccCccccccccCCC
Confidence 3322 2 36899999999999999877 333 122332211 011110000000 00000 00001112
Q ss_pred CCCCCCCccceEEEEecCH------HHHHHHHHHhhccCCCCCCChHHHHHHHc--cCccccCCcccccccc
Q 024367 179 GPKPALYFNAGMFVFEPSL------STYHDLLETVQITTPTSFAEQDFLNMYFR--DIYRPIPPIYNLVVAM 242 (268)
Q Consensus 179 g~~~~~yfNsGv~li~~~~------~~~~~l~~~~~~~~~~~~~DQd~LN~~~~--~~~~~Lp~~yN~~~~~ 242 (268)
..-|+-+|++-=.+.. .-.+.+++-.++.-...++|..-||.+|- ...+.||+.|++....
T Consensus 246 ---GDfYY~ga~fGGt~~~vl~Lt~~c~~~i~~D~~n~I~A~WhDESHLNKYfl~~KPtKvLSPEY~Wd~~~ 314 (337)
T PF03414_consen 246 ---GDFYYHGAFFGGTVEEVLRLTEACHQGIMQDKANGIEALWHDESHLNKYFLYHKPTKVLSPEYCWDERF 314 (337)
T ss_dssp ----S--EECCEEEECHHHHHHHHHHHHHHHHHHHHTT---TTCHHHHHHHHHHHS--SEEE-GGGSBSHHH
T ss_pred ---CCeEEeceecCCcHHHHHHHHHHHHHHHHhhhhcCceEeccchhhhHHHHhhCCCceecCHHHccCccC
Confidence 3567888887655544 11223333333333467899999999874 3478999999976543
No 47
>PRK11204 N-glycosyltransferase; Provisional
Probab=65.43 E-value=17 Score=33.25 Aligned_cols=101 Identities=16% Similarity=0.074 Sum_probs=49.0
Q ss_pred eecCcccHHHHHHHHHHHHhc-CCCCCEEEEECCCCCHHHHHHHHHc---CCEEEEecccCCCCchhhhhhccccccchh
Q 024367 31 LAGDGDYWKGVVGLVKGLRKA-KSKYPLLVAMLPDVPEEHRKILIEQ---GCILREIEPVYPPENQTQFAMAYYVINYSK 106 (268)
Q Consensus 31 l~~d~~Y~~~~~vl~~Sl~~~-~~~~~ivvl~~~~i~~~~~~~L~~~---~~~~~~v~~l~~~~~~~~~~~~~~~~~~~K 106 (268)
.+.|+. ..+.-++.|+.+. .++++++ +++|+-+++..+.+++. ...+ ..+...++.. ... +..
T Consensus 61 p~yne~--~~i~~~l~sl~~q~yp~~eii-VvdD~s~d~t~~~l~~~~~~~~~v---~~i~~~~n~G-ka~-----aln- 127 (420)
T PRK11204 61 PCYNEG--ENVEETISHLLALRYPNYEVI-AINDGSSDNTGEILDRLAAQIPRL---RVIHLAENQG-KAN-----ALN- 127 (420)
T ss_pred ecCCCH--HHHHHHHHHHHhCCCCCeEEE-EEECCCCccHHHHHHHHHHhCCcE---EEEEcCCCCC-HHH-----HHH-
Confidence 444543 4566677888754 3445554 55665555555444432 2222 2222111110 000 000
Q ss_pred eeccccccccEEEEEecceecccC-cccccCC--CCCceeee
Q 024367 107 LRIWEFVEYSKMIYLDGDIQVFDN-IDHLFDL--PDGYFYAV 145 (268)
Q Consensus 107 L~i~~l~~~drvlYLD~D~lv~~~-l~eLf~~--~~~~iaav 145 (268)
...+..++|-++++|+|.++-.+ +.++.+. .+..+++|
T Consensus 128 -~g~~~a~~d~i~~lDaD~~~~~d~L~~l~~~~~~~~~v~~v 168 (420)
T PRK11204 128 -TGAAAARSEYLVCIDGDALLDPDAAAYMVEHFLHNPRVGAV 168 (420)
T ss_pred -HHHHHcCCCEEEEECCCCCCChhHHHHHHHHHHhCCCeEEE
Confidence 01112467899999999998665 4455432 12235555
No 48
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=65.06 E-value=30 Score=28.30 Aligned_cols=94 Identities=13% Similarity=0.026 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHHc--CCEEEEecccCCCCchhhhhhccccccchheeccccccc
Q 024367 38 WKGVVGLVKGLRKAKSKYPLLVAMLPDVPEEHRKILIEQ--GCILREIEPVYPPENQTQFAMAYYVINYSKLRIWEFVEY 115 (268)
Q Consensus 38 ~~~~~vl~~Sl~~~~~~~~ivvl~~~~i~~~~~~~L~~~--~~~~~~v~~l~~~~~~~~~~~~~~~~~~~KL~i~~l~~~ 115 (268)
...+..++.|+.+.. ...++ ++.++-+++....|+.. ...+ .+.. .. +. ... ..+-...+....
T Consensus 13 ~~~l~~~l~sl~~q~-~~eii-vvdd~s~d~~~~~l~~~~~~~~~-~v~~--~~-~~-g~~-------~a~n~g~~~a~~ 78 (235)
T cd06434 13 PDVFRECLRSILRQK-PLEII-VVTDGDDEPYLSILSQTVKYGGI-FVIT--VP-HP-GKR-------RALAEGIRHVTT 78 (235)
T ss_pred hHHHHHHHHHHHhCC-CCEEE-EEeCCCChHHHHHHHhhccCCcE-EEEe--cC-CC-ChH-------HHHHHHHHHhCC
Confidence 355667788888765 45555 45566666555555322 1111 1111 11 10 000 011111122378
Q ss_pred cEEEEEecceecccC-cccccCC-CCCceeee
Q 024367 116 SKMIYLDGDIQVFDN-IDHLFDL-PDGYFYAV 145 (268)
Q Consensus 116 drvlYLD~D~lv~~~-l~eLf~~-~~~~iaav 145 (268)
|-|+++|+|+.+..+ |..+.+. .+..++++
T Consensus 79 d~v~~lD~D~~~~~~~l~~l~~~~~~~~v~~v 110 (235)
T cd06434 79 DIVVLLDSDTVWPPNALPEMLKPFEDPKVGGV 110 (235)
T ss_pred CEEEEECCCceeChhHHHHHHHhccCCCEeEE
Confidence 999999999999877 6666554 22335554
No 49
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=63.92 E-value=22 Score=28.47 Aligned_cols=90 Identities=14% Similarity=0.125 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHhcC-CCCCEEEEECCCCCHHHHHHHHHcCCEEEEecccCCCCchhhhhhccccccchheeccccccccE
Q 024367 39 KGVVGLVKGLRKAK-SKYPLLVAMLPDVPEEHRKILIEQGCILREIEPVYPPENQTQFAMAYYVINYSKLRIWEFVEYSK 117 (268)
Q Consensus 39 ~~~~vl~~Sl~~~~-~~~~ivvl~~~~i~~~~~~~L~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~KL~i~~l~~~dr 117 (268)
..+.-++.||.+.. +...++ +++++-++...+.+++..... .+..+..+++. ....... .. .+... ..++|-
T Consensus 10 ~~l~~~l~sl~~q~~~~~eii-ivD~~s~d~t~~~~~~~~~~~-~i~~~~~~~n~-g~~~~~n-~~-~~~a~--~~~~d~ 82 (202)
T cd04185 10 DLLKECLDALLAQTRPPDHII-VIDNASTDGTAEWLTSLGDLD-NIVYLRLPENL-GGAGGFY-EG-VRRAY--ELGYDW 82 (202)
T ss_pred HHHHHHHHHHHhccCCCceEE-EEECCCCcchHHHHHHhcCCC-ceEEEECcccc-chhhHHH-HH-HHHHh--ccCCCE
Confidence 44667788887653 334444 556665555566666554321 02222222221 0110000 00 11111 246889
Q ss_pred EEEEecceecccC-ccccc
Q 024367 118 MIYLDGDIQVFDN-IDHLF 135 (268)
Q Consensus 118 vlYLD~D~lv~~~-l~eLf 135 (268)
++++|+|.++..+ +++|.
T Consensus 83 v~~ld~D~~~~~~~l~~l~ 101 (202)
T cd04185 83 IWLMDDDAIPDPDALEKLL 101 (202)
T ss_pred EEEeCCCCCcChHHHHHHH
Confidence 9999999998654 33443
No 50
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=62.24 E-value=49 Score=29.73 Aligned_cols=97 Identities=15% Similarity=0.196 Sum_probs=47.8
Q ss_pred EeecCcccHHHHHHHHHHHHhcCC---CCCEEEEECCCCCHHHHHHHHHcCCEEEEecccCCCCchhhhhhccccccchh
Q 024367 30 FLAGDGDYWKGVVGLVKGLRKAKS---KYPLLVAMLPDVPEEHRKILIEQGCILREIEPVYPPENQTQFAMAYYVINYSK 106 (268)
Q Consensus 30 ~l~~d~~Y~~~~~vl~~Sl~~~~~---~~~ivvl~~~~i~~~~~~~L~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~K 106 (268)
++++| ...++.-++.||++..| ..+++| ..|+-.++..+..+..+..+..+...+... .....+.-...|.+
T Consensus 6 v~ayN--Rp~~l~r~LesLl~~~p~~~~~~liI-s~DG~~~~~~~~v~~~~~~i~~i~~~~~~~--~~~~~~~~~~~y~~ 80 (334)
T cd02514 6 VIACN--RPDYLRRMLDSLLSYRPSAEKFPIIV-SQDGGYEEVADVAKSFGDGVTHIQHPPISI--KNVNPPHKFQGYYR 80 (334)
T ss_pred EEecC--CHHHHHHHHHHHHhccccCCCceEEE-EeCCCchHHHHHHHhhccccEEEEcccccc--cccCcccccchhhH
Confidence 34454 56677778888887642 345553 446655555555555532221122111110 00000000001121
Q ss_pred e---------eccccccccEEEEEecceecccCc
Q 024367 107 L---------RIWEFVEYSKMIYLDGDIQVFDNI 131 (268)
Q Consensus 107 L---------~i~~l~~~drvlYLD~D~lv~~~l 131 (268)
+ .++...+++++|.||.|+++-.+.
T Consensus 81 ia~hyk~aln~vF~~~~~~~vIILEDDl~~sPdF 114 (334)
T cd02514 81 IARHYKWALTQTFNLFGYSFVIILEDDLDIAPDF 114 (334)
T ss_pred HHHHHHHHHHHHHHhcCCCEEEEECCCCccCHhH
Confidence 1 222223699999999999998773
No 51
>KOG4748 consensus Subunit of Golgi mannosyltransferase complex [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=62.08 E-value=11 Score=33.96 Aligned_cols=82 Identities=21% Similarity=0.180 Sum_probs=50.6
Q ss_pred CCCCCCCCccceEEEEecCHHHHHHHHHHhhc----cCCCCCCChHHHHHHHcc------CccccCCcccccccccccCC
Q 024367 178 LGPKPALYFNAGMFVFEPSLSTYHDLLETVQI----TTPTSFAEQDFLNMYFRD------IYRPIPPIYNLVVAMLWRHP 247 (268)
Q Consensus 178 ~g~~~~~yfNsGv~li~~~~~~~~~l~~~~~~----~~~~~~~DQd~LN~~~~~------~~~~Lp~~yN~~~~~~~~~~ 247 (268)
++......+|+|=+|++.+.+. ..+++...+ .......+|+++-.+... .|..||.|+=-... .+.
T Consensus 241 ii~qD~nG~naGSfLirns~~~-~~llD~w~dp~l~~~~~~~~Eq~al~~~~e~h~~l~~~vgilp~r~ins~~---~~~ 316 (364)
T KOG4748|consen 241 IIPQDCNGINAGSFLIRNSEWG-RLLLDAWNDPLLYELLWGQKEQDALGHFLENHPQLHSHVGILPLRYINSYP---NGA 316 (364)
T ss_pred ecccCCCCccccceEEecCccc-hhHHHhccCHHHHhhccchHHHHHHHHHHhhchhhhhheeeccHHHHhcCC---CCC
Confidence 3344567799999999988732 122332221 123455799999888764 57788876532211 111
Q ss_pred Ccc-cCCCceEEEeecC
Q 024367 248 ENV-EADKAKVVHYCAA 263 (268)
Q Consensus 248 ~~~-~~~~~~IiHf~g~ 263 (268)
..| ..+..-++||+|.
T Consensus 317 ~~~g~~egdlvvhFaGC 333 (364)
T KOG4748|consen 317 PGYGYEEGDLVVHFAGC 333 (364)
T ss_pred CCCccccCCeEEEeccc
Confidence 233 3678899999996
No 52
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=60.59 E-value=17 Score=33.74 Aligned_cols=22 Identities=23% Similarity=0.369 Sum_probs=16.9
Q ss_pred ccccEEEEEecceecccC-cccc
Q 024367 113 VEYSKMIYLDGDIQVFDN-IDHL 134 (268)
Q Consensus 113 ~~~drvlYLD~D~lv~~~-l~eL 134 (268)
..+|-++.+|+|.+.-.+ +.++
T Consensus 154 a~~d~iv~lDAD~~~~~d~L~~l 176 (444)
T PRK14583 154 ARSEYLVCIDGDALLDKNAVPYL 176 (444)
T ss_pred CCCCEEEEECCCCCcCHHHHHHH
Confidence 467899999999998665 4444
No 53
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=60.54 E-value=44 Score=27.73 Aligned_cols=89 Identities=10% Similarity=0.064 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHhcC-CC--CCEEEEECCCCCHHHHHHHHHcCC-EEEEecccCCCCchhhhhhccccccchheecccccc
Q 024367 39 KGVVGLVKGLRKAK-SK--YPLLVAMLPDVPEEHRKILIEQGC-ILREIEPVYPPENQTQFAMAYYVINYSKLRIWEFVE 114 (268)
Q Consensus 39 ~~~~vl~~Sl~~~~-~~--~~ivvl~~~~i~~~~~~~L~~~~~-~~~~v~~l~~~~~~~~~~~~~~~~~~~KL~i~~l~~ 114 (268)
..+.-++.||.+.. +. .+++ ++.++-+++..+.+++... ....+..+....+. .... +.. ...+...
T Consensus 14 ~~l~~~l~sl~~~~y~~~~~eii-vVdd~s~d~t~~i~~~~~~~~~~~i~~~~~~~~~-G~~~-----a~n--~g~~~a~ 84 (241)
T cd06427 14 EVLPQLIASLSALDYPRSKLDVK-LLLEEDDEETIAAARALRLPSIFRVVVVPPSQPR-TKPK-----ACN--YALAFAR 84 (241)
T ss_pred HHHHHHHHHHHhCcCCcccEEEE-EEECCCCchHHHHHHHhccCCCeeEEEecCCCCC-chHH-----HHH--HHHHhcC
Confidence 55677888887642 21 2333 4455556666666766432 11122222211111 0010 111 1112245
Q ss_pred ccEEEEEecceecccC-cccccC
Q 024367 115 YSKMIYLDGDIQVFDN-IDHLFD 136 (268)
Q Consensus 115 ~drvlYLD~D~lv~~~-l~eLf~ 136 (268)
.|=|+++|+|+.+-.+ +.++..
T Consensus 85 gd~i~~~DaD~~~~~~~l~~~~~ 107 (241)
T cd06427 85 GEYVVIYDAEDAPDPDQLKKAVA 107 (241)
T ss_pred CCEEEEEcCCCCCChHHHHHHHH
Confidence 6789999999997654 444443
No 54
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=59.65 E-value=21 Score=30.82 Aligned_cols=24 Identities=25% Similarity=0.419 Sum_probs=18.4
Q ss_pred ccccEEEEEecceecccC-cccccC
Q 024367 113 VEYSKMIYLDGDIQVFDN-IDHLFD 136 (268)
Q Consensus 113 ~~~drvlYLD~D~lv~~~-l~eLf~ 136 (268)
..-+-|+++|+|+++-.+ +..+.+
T Consensus 87 A~~d~l~flD~D~i~~~~~i~~~~~ 111 (281)
T PF10111_consen 87 ARGDYLIFLDADCIPSPDFIEKLLN 111 (281)
T ss_pred cCCCEEEEEcCCeeeCHHHHHHHHH
Confidence 367889999999999654 555555
No 55
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=59.19 E-value=37 Score=27.00 Aligned_cols=18 Identities=17% Similarity=0.217 Sum_probs=14.3
Q ss_pred ccccEEEEEecceecccC
Q 024367 113 VEYSKMIYLDGDIQVFDN 130 (268)
Q Consensus 113 ~~~drvlYLD~D~lv~~~ 130 (268)
.+.+=++++|+|.+...+
T Consensus 79 a~gd~i~~lD~Dd~~~~~ 96 (201)
T cd04195 79 CTYDWVARMDTDDISLPD 96 (201)
T ss_pred cCCCEEEEeCCccccCcH
Confidence 466779999999987654
No 56
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=57.12 E-value=45 Score=26.11 Aligned_cols=86 Identities=3% Similarity=-0.028 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHhcC-CCCCEEEEECCCCCHHHHHHHHHcCCEEEEecccCCCCchhhhhhccccccchheecccccccc
Q 024367 38 WKGVVGLVKGLRKAK-SKYPLLVAMLPDVPEEHRKILIEQGCILREIEPVYPPENQTQFAMAYYVINYSKLRIWEFVEYS 116 (268)
Q Consensus 38 ~~~~~vl~~Sl~~~~-~~~~ivvl~~~~i~~~~~~~L~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~KL~i~~l~~~d 116 (268)
...+..++.||.+.. ++..++ ++.++-+++..+.+++.....+.+.. . .+. ... ..+-...+....+
T Consensus 10 ~~~l~~~l~sl~~q~~~~~evi-vvDd~s~d~~~~~~~~~~~~~~~~~~--~-~~~-g~~-------~a~n~~~~~a~~~ 77 (202)
T cd06433 10 AETLEETIDSVLSQTYPNIEYI-VIDGGSTDGTVDIIKKYEDKITYWIS--E-PDK-GIY-------DAMNKGIALATGD 77 (202)
T ss_pred HHHHHHHHHHHHhCCCCCceEE-EEeCCCCccHHHHHHHhHhhcEEEEe--c-CCc-CHH-------HHHHHHHHHcCCC
Confidence 356677788987653 334443 55555555555656554332111111 1 111 111 1111112223567
Q ss_pred EEEEEecceecccC-ccccc
Q 024367 117 KMIYLDGDIQVFDN-IDHLF 135 (268)
Q Consensus 117 rvlYLD~D~lv~~~-l~eLf 135 (268)
=|++||+|..+..+ +..+.
T Consensus 78 ~v~~ld~D~~~~~~~~~~~~ 97 (202)
T cd06433 78 IIGFLNSDDTLLPGALLAVV 97 (202)
T ss_pred EEEEeCCCcccCchHHHHHH
Confidence 89999999988765 66655
No 57
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=56.45 E-value=12 Score=30.44 Aligned_cols=23 Identities=17% Similarity=0.323 Sum_probs=16.1
Q ss_pred cccEEEEEecceecccC-cccccC
Q 024367 114 EYSKMIYLDGDIQVFDN-IDHLFD 136 (268)
Q Consensus 114 ~~drvlYLD~D~lv~~~-l~eLf~ 136 (268)
..|-|++||+|..+..+ +..+.+
T Consensus 78 ~gd~i~~lD~D~~~~~~~l~~l~~ 101 (224)
T cd06442 78 RGDVIVVMDADLSHPPEYIPELLE 101 (224)
T ss_pred CCCEEEEEECCCCCCHHHHHHHHH
Confidence 34779999999887543 555544
No 58
>PF01793 Glyco_transf_15: Glycolipid 2-alpha-mannosyltransferase; InterPro: IPR002685 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This entry represents a family of fungi mannosyl-transferases involved in N-linked and O-linked glycosylation of proteins. They belong to the glycosyltransferase family 15 (GT15 from CAZY). Some of the enzymes in this family have been shown to be involved in O- and N-linked glycan modifications in the Golgi [].; GO: 0000030 mannosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane; PDB: 1S4P_A 1S4O_A 1S4N_A.
Probab=55.54 E-value=32 Score=30.77 Aligned_cols=117 Identities=18% Similarity=0.274 Sum_probs=51.9
Q ss_pred CCCCCCeEEEEEeecCcccHHHHHHHHHHHHh-cCC--CCCEEEEECCCCCHHHHHHHHHc-CC--EEEEe--cccCCCC
Q 024367 19 APSLPKRAYVTFLAGDGDYWKGVVGLVKGLRK-AKS--KYPLLVAMLPDVPEEHRKILIEQ-GC--ILREI--EPVYPPE 90 (268)
Q Consensus 19 ~~~~~~~a~~t~l~~d~~Y~~~~~vl~~Sl~~-~~~--~~~ivvl~~~~i~~~~~~~L~~~-~~--~~~~v--~~l~~~~ 90 (268)
...+.+-|+++ ||.|. =+.+++-+++||.. .|. +||.|+|-....+++.++.+++. .. ..-.| +....|+
T Consensus 51 ~~~r~~Aafv~-LvrN~-dL~~~l~SI~~lE~rFN~kf~YpwvFlnd~pFteeFk~~i~~~~~~~v~F~~Ip~e~W~~P~ 128 (328)
T PF01793_consen 51 NYPRENAAFVM-LVRNS-DLEGLLSSIRSLEDRFNKKFNYPWVFLNDEPFTEEFKEAISNATSGKVEFGLIPKEHWSYPD 128 (328)
T ss_dssp -HS---EEEEE-E--GG-GHHHHHHHHHHHHHHTTTTS---EEEEESS---HHHHHHHHHH-SS-EEEEE--GGGSS--T
T ss_pred cCCCCceEEEE-EEEch-hHHHHHHHHHHHHHHccCCCCCCEEEEeCCCCCHHHHHHHHHhhcCceEEEEeCHHHcCCCC
Confidence 34677777877 55554 48889888999864 344 57888777777999988888764 22 22222 2222232
Q ss_pred chh---------hhhh---cc-ccccc---hhe------eccccccccEEEEEecceecccCcc-cccCC
Q 024367 91 NQT---------QFAM---AY-YVINY---SKL------RIWEFVEYSKMIYLDGDIQVFDNID-HLFDL 137 (268)
Q Consensus 91 ~~~---------~~~~---~~-~~~~~---~KL------~i~~l~~~drvlYLD~D~lv~~~l~-eLf~~ 137 (268)
..+ .+.. .+ ....| .|+ ..+.|.+||=.-=+++|+-+.-||+ ++|..
T Consensus 129 ~ID~~~a~~~~~~~~~~~v~yg~s~sYr~McRf~SG~F~~hp~l~~ydyyWRvEP~v~~~Cdi~YD~F~~ 198 (328)
T PF01793_consen 129 WIDQEKAAESREKMAEEGVPYGDSESYRHMCRFYSGFFYRHPLLQDYDYYWRVEPDVKFYCDIDYDPFRF 198 (328)
T ss_dssp TS-HHHHHHHHHHHTT-TSTTTT-HHHHHHHHHHHHTGGGSGGGTT-SEEEE--TT-EE-S---S-HHHH
T ss_pred cCCHHHHHHHHHHHHhcCCCCCCchhHHHHHHHHHHhhhcChhhcCccEEEEeCCCceeecCCCCCHHHH
Confidence 111 1110 00 00011 121 2244458998999999999999987 56653
No 59
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=54.84 E-value=17 Score=29.19 Aligned_cols=17 Identities=29% Similarity=0.446 Sum_probs=13.7
Q ss_pred ccccEEEEEecceeccc
Q 024367 113 VEYSKMIYLDGDIQVFD 129 (268)
Q Consensus 113 ~~~drvlYLD~D~lv~~ 129 (268)
..+|=++++|+|+.+-.
T Consensus 85 a~~d~i~~~D~D~~~~~ 101 (196)
T cd02520 85 ARYDILVISDSDISVPP 101 (196)
T ss_pred CCCCEEEEECCCceECh
Confidence 46788999999988643
No 60
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=54.47 E-value=72 Score=26.15 Aligned_cols=33 Identities=12% Similarity=0.020 Sum_probs=20.7
Q ss_pred ccccEEEEEecceecccC-cccccCC-CCCceeee
Q 024367 113 VEYSKMIYLDGDIQVFDN-IDHLFDL-PDGYFYAV 145 (268)
Q Consensus 113 ~~~drvlYLD~D~lv~~~-l~eLf~~-~~~~iaav 145 (268)
...+=++++|+|+++-.+ |..+... .+..++++
T Consensus 86 a~~~~i~~~DaD~~~~~~~l~~~~~~~~~~~v~~v 120 (232)
T cd06437 86 AKGEYVAIFDADFVPPPDFLQKTPPYFADPKLGFV 120 (232)
T ss_pred CCCCEEEEEcCCCCCChHHHHHhhhhhcCCCeEEE
Confidence 468899999999998654 3443333 12235544
No 61
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=54.14 E-value=41 Score=29.09 Aligned_cols=89 Identities=9% Similarity=0.096 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHhcCCC---CCEEEEECCCCCHHHHHHHHH----cCCEEEEecccCCCCchhhhhhccccccchheecc
Q 024367 38 WKGVVGLVKGLRKAKSK---YPLLVAMLPDVPEEHRKILIE----QGCILREIEPVYPPENQTQFAMAYYVINYSKLRIW 110 (268)
Q Consensus 38 ~~~~~vl~~Sl~~~~~~---~~ivvl~~~~i~~~~~~~L~~----~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~KL~i~ 110 (268)
...+.-++.||....+. ..+ |+++++-++.....+.+ .... .+..+..+.+. .+.. .+=...
T Consensus 11 ~~~l~~~l~Sl~~~~~~~~~~EI-IvVDd~S~d~t~~~~~~~~~~~~~~--~v~vi~~~~n~-G~~~-------a~N~g~ 79 (299)
T cd02510 11 LSTLLRTVHSVINRTPPELLKEI-ILVDDFSDKPELKLLLEEYYKKYLP--KVKVLRLKKRE-GLIR-------ARIAGA 79 (299)
T ss_pred HHHHHHHHHHHHhcCchhcCCEE-EEEECCCCchHHHHHHHHHHhhcCC--cEEEEEcCCCC-CHHH-------HHHHHH
Confidence 36777889999876542 234 35666555544444422 1111 12222221111 1111 111111
Q ss_pred ccccccEEEEEecceecccC-cccccCC
Q 024367 111 EFVEYSKMIYLDGDIQVFDN-IDHLFDL 137 (268)
Q Consensus 111 ~l~~~drvlYLD~D~lv~~~-l~eLf~~ 137 (268)
+....+=|++||+|+.+..+ |+.|.+.
T Consensus 80 ~~A~gd~i~fLD~D~~~~~~wL~~ll~~ 107 (299)
T cd02510 80 RAATGDVLVFLDSHCEVNVGWLEPLLAR 107 (299)
T ss_pred HHccCCEEEEEeCCcccCccHHHHHHHH
Confidence 12356889999999999544 6666653
No 62
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=54.05 E-value=32 Score=27.87 Aligned_cols=24 Identities=17% Similarity=0.116 Sum_probs=17.8
Q ss_pred ccccEEEEEecceecccC-cccccC
Q 024367 113 VEYSKMIYLDGDIQVFDN-IDHLFD 136 (268)
Q Consensus 113 ~~~drvlYLD~D~lv~~~-l~eLf~ 136 (268)
...|-|+++|+|.++..+ |..+..
T Consensus 81 ~~~d~i~~~D~D~~~~~~~l~~l~~ 105 (229)
T cd04192 81 AKGDWIVTTDADCVVPSNWLLTFVA 105 (229)
T ss_pred hcCCEEEEECCCcccCHHHHHHHHH
Confidence 467899999999988654 445544
No 63
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.
Probab=51.06 E-value=75 Score=24.97 Aligned_cols=84 Identities=15% Similarity=0.242 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHhcCC---CCCEEEEECCCCCHHHHHHHHHcCCEEEEecccCCCCch-hhhhhccccccchheecccccc
Q 024367 39 KGVVGLVKGLRKAKS---KYPLLVAMLPDVPEEHRKILIEQGCILREIEPVYPPENQ-TQFAMAYYVINYSKLRIWEFVE 114 (268)
Q Consensus 39 ~~~~vl~~Sl~~~~~---~~~ivvl~~~~i~~~~~~~L~~~~~~~~~v~~l~~~~~~-~~~~~~~~~~~~~KL~i~~l~~ 114 (268)
..+..++.|+.+... .+.++ ++.++-+++..+.+++.+..++.. ....+. ...... ..+..... .-..
T Consensus 10 ~~i~~~l~sl~~~~~p~~~~eii-vvdd~s~D~t~~~~~~~~~~~~~~---~~~~~~gk~~aln---~g~~~a~~-~~~~ 81 (183)
T cd06438 10 AVIGNTVRSLKAQDYPRELYRIF-VVADNCTDDTAQVARAAGATVLER---HDPERRGKGYALD---FGFRHLLN-LADD 81 (183)
T ss_pred HHHHHHHHHHHhcCCCCcccEEE-EEeCCCCchHHHHHHHcCCeEEEe---CCCCCCCHHHHHH---HHHHHHHh-cCCC
Confidence 445667788876432 23444 455666666777777666543221 111110 000000 00000000 0125
Q ss_pred ccEEEEEecceecccC
Q 024367 115 YSKMIYLDGDIQVFDN 130 (268)
Q Consensus 115 ~drvlYLD~D~lv~~~ 130 (268)
+|-++++|+|..+-.+
T Consensus 82 ~d~v~~~DaD~~~~p~ 97 (183)
T cd06438 82 PDAVVVFDADNLVDPN 97 (183)
T ss_pred CCEEEEEcCCCCCChh
Confidence 8889999999998644
No 64
>KOG1950 consensus Glycosyl transferase, family 8 - glycogenin [Carbohydrate transport and metabolism]
Probab=50.87 E-value=6.6 Score=35.66 Aligned_cols=35 Identities=37% Similarity=0.641 Sum_probs=31.5
Q ss_pred ccchheeccccccccEEEEEecceecccCcccccC
Q 024367 102 INYSKLRIWEFVEYSKMIYLDGDIQVFDNIDHLFD 136 (268)
Q Consensus 102 ~~~~KL~i~~l~~~drvlYLD~D~lv~~~l~eLf~ 136 (268)
..|.+++.+.+..+++.+.+|+|..++.+.+.+|.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~f~ 185 (369)
T KOG1950|consen 151 LNYAKLYMFQLDFYSKLVKIDADDCILKNDDLLFS 185 (369)
T ss_pred hcccccceeeecccccceEEeccchhcCChhhhhh
Confidence 35778999998899999999999999999998988
No 65
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=50.78 E-value=13 Score=29.07 Aligned_cols=23 Identities=22% Similarity=0.296 Sum_probs=17.6
Q ss_pred ccEEEEEecceecccC-cccccCC
Q 024367 115 YSKMIYLDGDIQVFDN-IDHLFDL 137 (268)
Q Consensus 115 ~drvlYLD~D~lv~~~-l~eLf~~ 137 (268)
-|=+++||+|..+..+ +++|...
T Consensus 80 gd~i~~lD~D~~~~~~~l~~l~~~ 103 (185)
T cd04179 80 GDIVVTMDADLQHPPEDIPKLLEK 103 (185)
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHH
Confidence 3779999999888655 6667663
No 66
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function. Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=50.73 E-value=66 Score=25.91 Aligned_cols=81 Identities=11% Similarity=0.094 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHhcC-CCCCEEEEECCCCCHHHHHHHHHcCCEEEEecccCCCCchhhhhhccccccchheecccccccc
Q 024367 38 WKGVVGLVKGLRKAK-SKYPLLVAMLPDVPEEHRKILIEQGCILREIEPVYPPENQTQFAMAYYVINYSKLRIWEFVEYS 116 (268)
Q Consensus 38 ~~~~~vl~~Sl~~~~-~~~~ivvl~~~~i~~~~~~~L~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~KL~i~~l~~~d 116 (268)
-..+.-++.||.+.. +...++ ++.++-+++..+.+++.+..+. ..+.. ... .+-........+
T Consensus 11 ~~~l~~~l~sl~~q~~~~~evi-vvdd~s~d~~~~~~~~~~~~~~-----~~~~g---~~~-------a~n~g~~~a~~~ 74 (221)
T cd02522 11 AENLPRLLASLRRLNPLPLEII-VVDGGSTDGTVAIARSAGVVVI-----SSPKG---RAR-------QMNAGAAAARGD 74 (221)
T ss_pred HHHHHHHHHHHHhccCCCcEEE-EEeCCCCccHHHHHhcCCeEEE-----eCCcC---HHH-------HHHHHHHhccCC
Confidence 445677788887654 334444 5555555555565655333221 11111 110 111111223468
Q ss_pred EEEEEecceecccC-cccc
Q 024367 117 KMIYLDGDIQVFDN-IDHL 134 (268)
Q Consensus 117 rvlYLD~D~lv~~~-l~eL 134 (268)
-|+++|+|..+..+ +..|
T Consensus 75 ~i~~~D~D~~~~~~~l~~l 93 (221)
T cd02522 75 WLLFLHADTRLPPDWDAAI 93 (221)
T ss_pred EEEEEcCCCCCChhHHHHH
Confidence 89999999988654 4443
No 67
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=49.50 E-value=93 Score=25.21 Aligned_cols=90 Identities=12% Similarity=0.011 Sum_probs=44.3
Q ss_pred eecCcccHHHHHHHHHHHHhcC-CC--CCEEEEECCCCCHHHHHHHHHcCCEEEEecccCCCCchhhhhhccccccchhe
Q 024367 31 LAGDGDYWKGVVGLVKGLRKAK-SK--YPLLVAMLPDVPEEHRKILIEQGCILREIEPVYPPENQTQFAMAYYVINYSKL 107 (268)
Q Consensus 31 l~~d~~Y~~~~~vl~~Sl~~~~-~~--~~ivvl~~~~i~~~~~~~L~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~KL 107 (268)
.+.|+. ...+..++.||+... ++ +.++ +++++-+++..+.+++.+... .+..+..+.+. ..+. .. .-
T Consensus 8 p~~n~~-~~~l~~~l~sl~~q~~~~~~~eii-vvdd~s~d~t~~~~~~~~~~~-~~~~~~~~~~~-~~~~----~~--~n 77 (234)
T cd06421 8 PTYNEP-LEIVRKTLRAALAIDYPHDKLRVY-VLDDGRRPELRALAAELGVEY-GYRYLTRPDNR-HAKA----GN--LN 77 (234)
T ss_pred ecCCCc-HHHHHHHHHHHHhcCCCcccEEEE-EEcCCCchhHHHHHHHhhccc-CceEEEeCCCC-CCcH----HH--HH
Confidence 344532 234566788887643 33 3444 556666666666666654321 11111111110 0000 01 11
Q ss_pred eccccccccEEEEEecceecccC
Q 024367 108 RIWEFVEYSKMIYLDGDIQVFDN 130 (268)
Q Consensus 108 ~i~~l~~~drvlYLD~D~lv~~~ 130 (268)
...+....|-++++|+|.++-.+
T Consensus 78 ~~~~~a~~d~i~~lD~D~~~~~~ 100 (234)
T cd06421 78 NALAHTTGDFVAILDADHVPTPD 100 (234)
T ss_pred HHHHhCCCCEEEEEccccCcCcc
Confidence 11222378899999999998654
No 68
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=48.16 E-value=54 Score=25.47 Aligned_cols=88 Identities=13% Similarity=0.166 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHhcC-CCCCEEEEECCCCCHHHHHHHHHc----CCEEEEecccCCCCchhhhhhccccccchheecccc
Q 024367 38 WKGVVGLVKGLRKAK-SKYPLLVAMLPDVPEEHRKILIEQ----GCILREIEPVYPPENQTQFAMAYYVINYSKLRIWEF 112 (268)
Q Consensus 38 ~~~~~vl~~Sl~~~~-~~~~ivvl~~~~i~~~~~~~L~~~----~~~~~~v~~l~~~~~~~~~~~~~~~~~~~KL~i~~l 112 (268)
...+.-++.||.+.. ++..++ ++.++-++...+.+++. ...++.+ ...+.. +.. ...+=...+.
T Consensus 9 ~~~l~~~l~sl~~q~~~~~eii-vvdd~s~d~t~~~~~~~~~~~~~~~~~~--~~~~~~---~~~-----~~~~n~g~~~ 77 (182)
T cd06420 9 PEALELVLKSVLNQSILPFEVI-IADDGSTEETKELIEEFKSQFPIPIKHV--WQEDEG---FRK-----AKIRNKAIAA 77 (182)
T ss_pred hHHHHHHHHHHHhccCCCCEEE-EEeCCCchhHHHHHHHHHhhcCCceEEE--EcCCcc---hhH-----HHHHHHHHHH
Confidence 345667788887653 344454 45555555444444433 1222211 111111 110 0111112223
Q ss_pred ccccEEEEEecceecccC-cccccC
Q 024367 113 VEYSKMIYLDGDIQVFDN-IDHLFD 136 (268)
Q Consensus 113 ~~~drvlYLD~D~lv~~~-l~eLf~ 136 (268)
...+-+++||+|.++..+ +..+.+
T Consensus 78 a~g~~i~~lD~D~~~~~~~l~~~~~ 102 (182)
T cd06420 78 AKGDYLIFIDGDCIPHPDFIADHIE 102 (182)
T ss_pred hcCCEEEEEcCCcccCHHHHHHHHH
Confidence 467889999999988655 444443
No 69
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=45.61 E-value=60 Score=25.86 Aligned_cols=90 Identities=12% Similarity=0.054 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHhcC-CCCCEEEEECCCCCHHHHHHHHHcCCEE-EEecccCCCCchhhhhhccccccchheecccccccc
Q 024367 39 KGVVGLVKGLRKAK-SKYPLLVAMLPDVPEEHRKILIEQGCIL-REIEPVYPPENQTQFAMAYYVINYSKLRIWEFVEYS 116 (268)
Q Consensus 39 ~~~~vl~~Sl~~~~-~~~~ivvl~~~~i~~~~~~~L~~~~~~~-~~v~~l~~~~~~~~~~~~~~~~~~~KL~i~~l~~~d 116 (268)
..+.-++.||.+.. ++..++ ++.++-+++..+.+++..... ..+..+....+. .... .+.+ .......+
T Consensus 11 ~~l~~~l~sl~~q~~~~~eii-VvddgS~d~t~~~~~~~~~~~~~~~~~~~~~~~~-G~~~-----~~n~--g~~~~~g~ 81 (214)
T cd04196 11 KYLREQLDSILAQTYKNDELI-ISDDGSTDGTVEIIKEYIDKDPFIIILIRNGKNL-GVAR-----NFES--LLQAADGD 81 (214)
T ss_pred HHHHHHHHHHHhCcCCCeEEE-EEeCCCCCCcHHHHHHHHhcCCceEEEEeCCCCc-cHHH-----HHHH--HHHhCCCC
Confidence 55667788887653 334444 455554444444444432110 011112111111 0110 1111 12234678
Q ss_pred EEEEEecceecccC-cccccCC
Q 024367 117 KMIYLDGDIQVFDN-IDHLFDL 137 (268)
Q Consensus 117 rvlYLD~D~lv~~~-l~eLf~~ 137 (268)
-|++||+|.++..+ +..+++.
T Consensus 82 ~v~~ld~Dd~~~~~~l~~~~~~ 103 (214)
T cd04196 82 YVFFCDQDDIWLPDKLERLLKA 103 (214)
T ss_pred EEEEECCCcccChhHHHHHHHH
Confidence 89999999888766 7777664
No 70
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=43.55 E-value=81 Score=24.06 Aligned_cols=86 Identities=13% Similarity=0.114 Sum_probs=43.0
Q ss_pred cccHHHHHHHHHHHHhcCC-CCCEEEEECCCCCHHHHHHHHHcCCEEEEecccCCCCchhhhhhccccccchheeccccc
Q 024367 35 GDYWKGVVGLVKGLRKAKS-KYPLLVAMLPDVPEEHRKILIEQGCILREIEPVYPPENQTQFAMAYYVINYSKLRIWEFV 113 (268)
Q Consensus 35 ~~Y~~~~~vl~~Sl~~~~~-~~~ivvl~~~~i~~~~~~~L~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~KL~i~~l~ 113 (268)
.|....+..++.|+..... +.. +++++++-++...+.+++.......+.......+. ...+.+-......
T Consensus 12 ~n~~~~l~~~l~s~~~q~~~~~e-iivvddgs~d~t~~~~~~~~~~~~~~~~~~~~~~~--------g~~~~~~~~~~~~ 82 (291)
T COG0463 12 YNEEEYLPEALESLLNQTYKDFE-IIVVDDGSTDGTTEIAIEYGAKDVRVIRLINERNG--------GLGAARNAGLEYA 82 (291)
T ss_pred cchhhhHHHHHHHHHhhhhcceE-EEEEeCCCCCChHHHHHHHhhhcceEEEeecccCC--------ChHHHHHhhHHhc
Confidence 4455778888999987543 234 45667666655555555443321001111100110 0112222222222
Q ss_pred cccEEEEEecceecccC
Q 024367 114 EYSKMIYLDGDIQVFDN 130 (268)
Q Consensus 114 ~~drvlYLD~D~lv~~~ 130 (268)
..+-++++|+|.+ ..+
T Consensus 83 ~~~~~~~~d~d~~-~~~ 98 (291)
T COG0463 83 RGDYIVFLDADDQ-HPP 98 (291)
T ss_pred cCCEEEEEccCCC-CCH
Confidence 2288999999999 654
No 71
>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) 2.4.1.101 from EC transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C terminus []. These proteins are members of the glycosyl transferase family 13 (GH13 from CAZY); GO: 0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0000139 Golgi membrane; PDB: 2APC_A 2AM4_A 1FO9_A 2AM3_A 1FOA_A 2AM5_A 1FO8_A.
Probab=43.42 E-value=80 Score=29.44 Aligned_cols=108 Identities=19% Similarity=0.264 Sum_probs=46.1
Q ss_pred EEEEEeecCcccHHHHHHHHHHHHhcC---CCCCEEEEECCCCCHHHHHHHHHcCCEEEEecccCC-----CCchhhhhh
Q 024367 26 AYVTFLAGDGDYWKGVVGLVKGLRKAK---SKYPLLVAMLPDVPEEHRKILIEQGCILREIEPVYP-----PENQTQFAM 97 (268)
Q Consensus 26 a~~t~l~~d~~Y~~~~~vl~~Sl~~~~---~~~~ivvl~~~~i~~~~~~~L~~~~~~~~~v~~l~~-----~~~~~~~~~ 97 (268)
+=|.++|+|. ..++.-++.||.++. ..+|++|- -|+-.++..+.+++.+..+..+...+. +.....+..
T Consensus 95 ~pVlV~AcNR--p~yl~r~L~sLl~~rp~~~~fpIiVS-QDg~~~~~~~vi~~y~~~v~~i~~~~~~~i~~~~~~~~~~~ 171 (434)
T PF03071_consen 95 IPVLVFACNR--PDYLRRTLDSLLKYRPSAEKFPIIVS-QDGDDEEVAEVIKSYGDQVTYIQHPDFSPITIPPKEKKFKG 171 (434)
T ss_dssp --EEEEESS---TT-HHHHHHHHHHH-S-TTTS-EEEE-E-TT-HHHHHHHHGGGGGSEEEE-S--S-----TT-GGGHH
T ss_pred ceEEEEecCC--cHHHHHHHHHHHHcCCCCCCccEEEE-ecCCcHHHHHHHHHhhhhheeeecCCcCCceeCcccccccc
Confidence 3334455653 233444556665543 35677643 355566667777776533222222211 100001110
Q ss_pred ccccccchheec---cccccccEEEEEecceecccCcccccC
Q 024367 98 AYYVINYSKLRI---WEFVEYSKMIYLDGDIQVFDNIDHLFD 136 (268)
Q Consensus 98 ~~~~~~~~KL~i---~~l~~~drvlYLD~D~lv~~~l~eLf~ 136 (268)
-+..+.-+|..+ +....|++||.+.-|+.+--|.=+-|.
T Consensus 172 y~~IA~HYk~aL~~vF~~~~~~~vIIlEDDL~isPDFf~Yf~ 213 (434)
T PF03071_consen 172 YYKIARHYKWALSQVFNKFKYSSVIILEDDLEISPDFFEYFS 213 (434)
T ss_dssp HHHHHHHHHHHHHHHHHTS--SEEEEEETTEEE-TTHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhcCCceEEEEecCcccCccHHHHHH
Confidence 000111223332 322368999999999999776655554
No 72
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=42.17 E-value=91 Score=24.61 Aligned_cols=24 Identities=13% Similarity=0.091 Sum_probs=17.1
Q ss_pred ccccEEEEEecceecccC-cccccC
Q 024367 113 VEYSKMIYLDGDIQVFDN-IDHLFD 136 (268)
Q Consensus 113 ~~~drvlYLD~D~lv~~~-l~eLf~ 136 (268)
...+=++++|+|..+..+ +..+.+
T Consensus 82 a~~d~i~~ld~D~~~~~~~l~~~~~ 106 (202)
T cd04184 82 ATGEFVALLDHDDELAPHALYEVVK 106 (202)
T ss_pred hcCCEEEEECCCCcCChHHHHHHHH
Confidence 356789999999988654 444443
No 73
>PF04765 DUF616: Protein of unknown function (DUF616); InterPro: IPR006852 The entry represents a protein of unknown function. The function of is unknown although a number of the members are thought to be glycosyltransferases.
Probab=40.50 E-value=41 Score=29.78 Aligned_cols=98 Identities=12% Similarity=0.008 Sum_probs=57.0
Q ss_pred eEEEEEeecCcccHH-HHHHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHHc-----------CCEEEEecccCCCCch
Q 024367 25 RAYVTFLAGDGDYWK-GVVGLVKGLRKAKSKYPLLVAMLPDVPEEHRKILIEQ-----------GCILREIEPVYPPENQ 92 (268)
Q Consensus 25 ~a~~t~l~~d~~Y~~-~~~vl~~Sl~~~~~~~~ivvl~~~~i~~~~~~~L~~~-----------~~~~~~v~~l~~~~~~ 92 (268)
.+.+|.+-++.+.+. +..+.-.|. ....++++ +|+.+.+ .|+.. .++++.|+.+...
T Consensus 65 vvV~saIFG~yD~l~qP~~i~~~s~----~~vcf~mF-~D~~t~~---~l~~~~~~~~~~~~ig~WrIv~v~~lp~~--- 133 (305)
T PF04765_consen 65 VVVYSAIFGNYDKLRQPKNISEYSK----KNVCFFMF-VDEETLK---SLESEGHIPDENKKIGIWRIVVVKNLPYD--- 133 (305)
T ss_pred EEEEEEecCCCccccCchhhCHHHh----cCccEEEE-EehhhHH---HHHhcCCccccccccCceEEEEecCCCCc---
Confidence 555565555555552 333222222 24555544 4655543 33331 2466666544221
Q ss_pred hhhhhccccccchheecccc-ccccEEEEEecceecccCcccccCC
Q 024367 93 TQFAMAYYVINYSKLRIWEF-VEYSKMIYLDGDIQVFDNIDHLFDL 137 (268)
Q Consensus 93 ~~~~~~~~~~~~~KL~i~~l-~~~drvlYLD~D~lv~~~l~eLf~~ 137 (268)
.++-.+.+.|++.-++ .+|+--||+|+-+-+++|+..|++-
T Consensus 134 ----d~rr~~r~~K~lpHrlfp~y~ySIWID~ki~L~~Dp~~lie~ 175 (305)
T PF04765_consen 134 ----DPRRNGRIPKLLPHRLFPNYDYSIWIDGKIQLIVDPLLLIER 175 (305)
T ss_pred ----chhhcCcccceeccccCCCCceEEEEeeeEEEecCHHHHHHH
Confidence 1112345788888876 5899999999999999998877764
No 74
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=40.27 E-value=2.6e+02 Score=28.69 Aligned_cols=79 Identities=14% Similarity=0.088 Sum_probs=39.8
Q ss_pred CCEEEEECCCCCHHHHHHHHHcCCEEEEecccCCCCchhhhhhccccccchheeccccccccEEEEEecceecccCc-cc
Q 024367 55 YPLLVAMLPDVPEEHRKILIEQGCILREIEPVYPPENQTQFAMAYYVINYSKLRIWEFVEYSKMIYLDGDIQVFDNI-DH 133 (268)
Q Consensus 55 ~~ivvl~~~~i~~~~~~~L~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~KL~i~~l~~~drvlYLD~D~lv~~~l-~e 133 (268)
++++ +++|+-+++..+..++.++.++.. +++. ..+.. ......+ ..+.|=|+.+|||.++..|. ..
T Consensus 293 ~EVi-VVDDgS~D~t~~la~~~~v~yI~R-----~~n~-~gKAG-nLN~aL~-----~a~GEyIavlDAD~ip~pdfL~~ 359 (852)
T PRK11498 293 LNIW-ILDDGGREEFRQFAQEVGVKYIAR-----PTHE-HAKAG-NINNALK-----YAKGEFVAIFDCDHVPTRSFLQM 359 (852)
T ss_pred eEEE-EEeCCCChHHHHHHHHCCcEEEEe-----CCCC-cchHH-HHHHHHH-----hCCCCEEEEECCCCCCChHHHHH
Confidence 3444 567776777766667777655421 1111 00000 0000011 13578899999999987663 33
Q ss_pred ccCC--CCCceeeee
Q 024367 134 LFDL--PDGYFYAVM 146 (268)
Q Consensus 134 Lf~~--~~~~iaav~ 146 (268)
+... .+..+|+|.
T Consensus 360 ~V~~f~~dP~VglVQ 374 (852)
T PRK11498 360 TMGWFLKDKKLAMMQ 374 (852)
T ss_pred HHHHHHhCCCeEEEE
Confidence 3221 223366664
No 75
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=40.24 E-value=1.8e+02 Score=28.03 Aligned_cols=48 Identities=15% Similarity=0.235 Sum_probs=31.2
Q ss_pred cccccCCCCCCCeEEEEEeecCcc---cHHHHHHHHHHHHhcCC--CCCEEEEE
Q 024367 13 TTSLSKAPSLPKRAYVTFLAGDGD---YWKGVVGLVKGLRKAKS--KYPLLVAM 61 (268)
Q Consensus 13 ~~~~~~~~~~~~~a~~t~l~~d~~---Y~~~~~vl~~Sl~~~~~--~~~ivvl~ 61 (268)
+..-+..++.++-|.+.=+ +|++ -..++.++..||.+.+. ..|++|+-
T Consensus 134 ~~p~~p~p~~hrTAilmPi-ynEd~~rVfAgLrA~~eSla~Tg~~~~FD~FVLS 186 (736)
T COG2943 134 IAPNEPLPDLHRTAILMPI-YNEDVNRVFAGLRATYESLAATGHAEHFDFFVLS 186 (736)
T ss_pred CCCCCCCCcccceeEEeec-cccCHHHHHHHHHHHHHHHHhhCCcccceEEEEc
Confidence 3344556677776666544 3654 45678899999988654 56777664
No 76
>PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function. These proteins colocalize within the cis Golgi, where they are physically associated in two distinct complexes [].
Probab=38.83 E-value=1.5e+02 Score=25.69 Aligned_cols=48 Identities=13% Similarity=0.036 Sum_probs=29.2
Q ss_pred ccCCCCCCCeEEEEEeecCcccHHHHHHHHHHHHhcCCCC--CEEEEECCCCC
Q 024367 16 LSKAPSLPKRAYVTFLAGDGDYWKGVVGLVKGLRKAKSKY--PLLVAMLPDVP 66 (268)
Q Consensus 16 ~~~~~~~~~~a~~t~l~~d~~Y~~~~~vl~~Sl~~~~~~~--~ivvl~~~~i~ 66 (268)
.....+.++...+|.+--...|++.-.-++.|| ..|+. .+-+++ ++.+
T Consensus 18 ~~~~~~~e~VLILtplrna~~~l~~y~~~L~~L--~YP~~lIsLgfLv-~d~~ 67 (269)
T PF03452_consen 18 SDAARNKESVLILTPLRNAASFLPDYFDNLLSL--TYPHELISLGFLV-SDSS 67 (269)
T ss_pred CcccccCCeEEEEEecCCchHHHHHHHHHHHhC--CCCchheEEEEEc-CCCc
Confidence 345566777778887743456877777777777 33433 344454 4454
No 77
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=36.36 E-value=46 Score=30.04 Aligned_cols=22 Identities=18% Similarity=0.303 Sum_probs=16.7
Q ss_pred ccccEEEEEecceecccC-cccc
Q 024367 113 VEYSKMIYLDGDIQVFDN-IDHL 134 (268)
Q Consensus 113 ~~~drvlYLD~D~lv~~~-l~eL 134 (268)
..+|-++++|+|+++-.+ |.++
T Consensus 125 a~ge~i~~~DaD~~~~p~~L~~l 147 (373)
T TIGR03472 125 ARHDILVIADSDISVGPDYLRQV 147 (373)
T ss_pred ccCCEEEEECCCCCcChhHHHHH
Confidence 468899999999998554 3333
No 78
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.
Probab=35.46 E-value=2.4e+02 Score=23.10 Aligned_cols=87 Identities=11% Similarity=0.165 Sum_probs=47.6
Q ss_pred eecCcccHHHHHHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHHcCCEEEEecccCCCCchhhhhhccccccchheecc
Q 024367 31 LAGDGDYWKGVVGLVKGLRKAKSKYPLLVAMLPDVPEEHRKILIEQGCILREIEPVYPPENQTQFAMAYYVINYSKLRIW 110 (268)
Q Consensus 31 l~~d~~Y~~~~~vl~~Sl~~~~~~~~ivvl~~~~i~~~~~~~L~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~KL~i~ 110 (268)
.+.|+ ...+..++.||.... ..++ +++++-++...+.+++.+..++.. .. . .+.. .|=+..
T Consensus 7 ~~~Ne--~~~l~~~l~sl~~~~--~eii-vvD~gStD~t~~i~~~~~~~v~~~---~~-~---g~~~-------~~n~~~ 67 (229)
T cd02511 7 ITKNE--ERNIERCLESVKWAV--DEII-VVDSGSTDRTVEIAKEYGAKVYQR---WW-D---GFGA-------QRNFAL 67 (229)
T ss_pred EeCCc--HHHHHHHHHHHhccc--CEEE-EEeCCCCccHHHHHHHcCCEEEEC---CC-C---ChHH-------HHHHHH
Confidence 44443 345667778886442 2444 566666666667777777765433 11 1 1111 111111
Q ss_pred ccccccEEEEEecceecccC-cccccC
Q 024367 111 EFVEYSKMIYLDGDIQVFDN-IDHLFD 136 (268)
Q Consensus 111 ~l~~~drvlYLD~D~lv~~~-l~eLf~ 136 (268)
.....+=|++||+|.++..+ +.+|.+
T Consensus 68 ~~a~~d~vl~lDaD~~~~~~~~~~l~~ 94 (229)
T cd02511 68 ELATNDWVLSLDADERLTPELADEILA 94 (229)
T ss_pred HhCCCCEEEEEeCCcCcCHHHHHHHHH
Confidence 22346689999999998765 444444
No 79
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=34.78 E-value=1.6e+02 Score=22.46 Aligned_cols=46 Identities=26% Similarity=0.180 Sum_probs=34.1
Q ss_pred cCcccHHHHHHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHHcCCE
Q 024367 33 GDGDYWKGVVGLVKGLRKAKSKYPLLVAMLPDVPEEHRKILIEQGCI 79 (268)
Q Consensus 33 ~d~~Y~~~~~vl~~Sl~~~~~~~~ivvl~~~~i~~~~~~~L~~~~~~ 79 (268)
.+..|...+..++..|++.+.+ ++.+++...++++..+.|++.|..
T Consensus 62 l~~~~~~~~~~~~~~L~~~g~~-~i~vivGG~~~~~~~~~l~~~Gvd 107 (132)
T TIGR00640 62 LAGGHLTLVPALRKELDKLGRP-DILVVVGGVIPPQDFDELKEMGVA 107 (132)
T ss_pred chhhhHHHHHHHHHHHHhcCCC-CCEEEEeCCCChHhHHHHHHCCCC
Confidence 3567999999989999887653 444466555777778889998874
No 80
>PRK10063 putative glycosyl transferase; Provisional
Probab=34.46 E-value=1.4e+02 Score=25.29 Aligned_cols=83 Identities=13% Similarity=0.161 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHhc----CCCCCEEEEECCCCCHHHHHHHHHcCCEEEEecccCCCCchhhhhhccccccchheeccccc
Q 024367 38 WKGVVGLVKGLRKA----KSKYPLLVAMLPDVPEEHRKILIEQGCILREIEPVYPPENQTQFAMAYYVINYSKLRIWEFV 113 (268)
Q Consensus 38 ~~~~~vl~~Sl~~~----~~~~~ivvl~~~~i~~~~~~~L~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~KL~i~~l~ 113 (268)
...+.-++.||... ..+..+ ++++++-++...+.+++..... .+..+..+ +. .+.. +..+ .....
T Consensus 13 ~~~l~~~l~sl~~~~~~~~~~~Ei-IVvDdgStD~t~~i~~~~~~~~-~i~~i~~~-~~-G~~~-----A~N~--Gi~~a 81 (248)
T PRK10063 13 LEGIVKTHASLRHLAQDPGISFEW-IVVDGGSNDGTREFLENLNGIF-NLRFVSEP-DN-GIYD-----AMNK--GIAMA 81 (248)
T ss_pred HHHHHHHHHHHHHHHhCCCCCEEE-EEEECcCcccHHHHHHHhcccC-CEEEEECC-CC-CHHH-----HHHH--HHHHc
Confidence 44556666777532 223333 3556666666666677653210 11122111 11 1111 1111 11112
Q ss_pred cccEEEEEecceecccCc
Q 024367 114 EYSKMIYLDGDIQVFDNI 131 (268)
Q Consensus 114 ~~drvlYLD~D~lv~~~l 131 (268)
..+=|++||+|-++..+.
T Consensus 82 ~g~~v~~ld~DD~~~~~~ 99 (248)
T PRK10063 82 QGRFALFLNSGDIFHQDA 99 (248)
T ss_pred CCCEEEEEeCCcccCcCH
Confidence 467899999998887764
No 81
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=34.43 E-value=2.5e+02 Score=22.77 Aligned_cols=22 Identities=23% Similarity=0.348 Sum_probs=15.9
Q ss_pred cccEEEEEecceecccC-ccccc
Q 024367 114 EYSKMIYLDGDIQVFDN-IDHLF 135 (268)
Q Consensus 114 ~~drvlYLD~D~lv~~~-l~eLf 135 (268)
.+|=|+++|+|.++-.+ |.++.
T Consensus 84 ~~d~i~~lD~D~~~~~~~l~~l~ 106 (236)
T cd06435 84 DAEIIAVIDADYQVEPDWLKRLV 106 (236)
T ss_pred CCCEEEEEcCCCCcCHHHHHHHH
Confidence 37889999999887554 44443
No 82
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=34.30 E-value=1.1e+02 Score=28.48 Aligned_cols=100 Identities=9% Similarity=0.087 Sum_probs=47.8
Q ss_pred CCCeEEEEEeecCcccHHHHHHHHHHHHhcC-CCCCE-EEEECCCCCHHHHHHHH---HcCCEEEEecccCCCCchhhhh
Q 024367 22 LPKRAYVTFLAGDGDYWKGVVGLVKGLRKAK-SKYPL-LVAMLPDVPEEHRKILI---EQGCILREIEPVYPPENQTQFA 96 (268)
Q Consensus 22 ~~~~a~~t~l~~d~~Y~~~~~vl~~Sl~~~~-~~~~i-vvl~~~~i~~~~~~~L~---~~~~~~~~v~~l~~~~~~~~~~ 96 (268)
.++...++ -+-|+. ..+.-++.|+.+.. +...+ +++++++-+++..+.++ +.+..+ .+...+... ...
T Consensus 48 ~P~vsVII-P~yNe~--~~l~~~l~sl~~q~yp~~~~eIiVVDd~StD~T~~il~~~~~~~~~v-~v~~~~~~~---Gka 120 (439)
T TIGR03111 48 LPDITIII-PVYNSE--DTLFNCIESIYNQTYPIELIDIILANNQSTDDSFQVFCRAQNEFPGL-SLRYMNSDQ---GKA 120 (439)
T ss_pred CCCEEEEE-EeCCCh--HHHHHHHHHHHhcCCCCCCeEEEEEECCCChhHHHHHHHHHHhCCCe-EEEEeCCCC---CHH
Confidence 34444433 334544 56677888887653 33223 44666766666655544 322221 122222111 111
Q ss_pred hccccccchheeccccccccEEEEEecceecccC-ccccc
Q 024367 97 MAYYVINYSKLRIWEFVEYSKMIYLDGDIQVFDN-IDHLF 135 (268)
Q Consensus 97 ~~~~~~~~~KL~i~~l~~~drvlYLD~D~lv~~~-l~eLf 135 (268)
.. .. ...+....+=|+++|+|.++-.+ +.++.
T Consensus 121 ~A-----lN--~gl~~s~g~~v~~~DaD~~~~~d~L~~l~ 153 (439)
T TIGR03111 121 KA-----LN--AAIYNSIGKYIIHIDSDGKLHKDAIKNMV 153 (439)
T ss_pred HH-----HH--HHHHHccCCEEEEECCCCCcChHHHHHHH
Confidence 10 00 01111234569999999998654 44443
No 83
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=33.88 E-value=2.3e+02 Score=28.21 Aligned_cols=34 Identities=21% Similarity=0.217 Sum_probs=24.2
Q ss_pred ccccEEEEEecceecccC-cccccCC-C-CCceeeee
Q 024367 113 VEYSKMIYLDGDIQVFDN-IDHLFDL-P-DGYFYAVM 146 (268)
Q Consensus 113 ~~~drvlYLD~D~lv~~~-l~eLf~~-~-~~~iaav~ 146 (268)
.+||-++.||||++..+| +..+... . +..+|++.
T Consensus 219 ~~~eyivvLDADs~m~~d~L~~lv~~m~~dP~vGlVQ 255 (691)
T PRK05454 219 GAYDYMVVLDADSLMSGDTLVRLVRLMEANPRAGLIQ 255 (691)
T ss_pred CCcCEEEEEcCCCCCCHHHHHHHHHHHhhCcCEEEEe
Confidence 478999999999999887 5555542 1 33477775
No 84
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=33.62 E-value=1.7e+02 Score=21.68 Aligned_cols=52 Identities=19% Similarity=0.175 Sum_probs=35.2
Q ss_pred EEEEeecCcccHHHHHHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHHcCCE
Q 024367 27 YVTFLAGDGDYWKGVVGLVKGLRKAKSKYPLLVAMLPDVPEEHRKILIEQGCI 79 (268)
Q Consensus 27 ~~t~l~~d~~Y~~~~~vl~~Sl~~~~~~~~ivvl~~~~i~~~~~~~L~~~~~~ 79 (268)
++.+.+.+..+...+..++..|++.+.+ .+.+++.....++..+.+++.|+.
T Consensus 53 ~V~iS~~~~~~~~~~~~~~~~L~~~~~~-~i~i~~GG~~~~~~~~~~~~~G~d 104 (122)
T cd02071 53 VIGLSSLSGGHMTLFPEVIELLRELGAG-DILVVGGGIIPPEDYELLKEMGVA 104 (122)
T ss_pred EEEEcccchhhHHHHHHHHHHHHhcCCC-CCEEEEECCCCHHHHHHHHHCCCC
Confidence 3333345678888888888888887554 344455555667778888888864
No 85
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=32.41 E-value=2.5e+02 Score=22.59 Aligned_cols=26 Identities=15% Similarity=0.160 Sum_probs=18.1
Q ss_pred cccccccEEEEEecceecccC-ccccc
Q 024367 110 WEFVEYSKMIYLDGDIQVFDN-IDHLF 135 (268)
Q Consensus 110 ~~l~~~drvlYLD~D~lv~~~-l~eLf 135 (268)
.+....+=+++||+|.++..+ +..++
T Consensus 80 ~~~a~gd~i~~lD~D~~~~~~~l~~~~ 106 (219)
T cd06913 80 IAQSSGRYLCFLDSDDVMMPQRIRLQY 106 (219)
T ss_pred HHhcCCCEEEEECCCccCChhHHHHHH
Confidence 344567899999999887654 44443
No 86
>PRK10073 putative glycosyl transferase; Provisional
Probab=30.91 E-value=1.6e+02 Score=26.03 Aligned_cols=86 Identities=9% Similarity=0.059 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHhcC-CCCCEEEEECCCCCHHHHHHHHHc---CCEEEEecccCCCCchhhhhhccccccchheeccccc
Q 024367 38 WKGVVGLVKGLRKAK-SKYPLLVAMLPDVPEEHRKILIEQ---GCILREIEPVYPPENQTQFAMAYYVINYSKLRIWEFV 113 (268)
Q Consensus 38 ~~~~~vl~~Sl~~~~-~~~~ivvl~~~~i~~~~~~~L~~~---~~~~~~v~~l~~~~~~~~~~~~~~~~~~~KL~i~~l~ 113 (268)
-..+.-++.||.... ++..++ ++.|+-++...+.+++. ...+ ..+.. ++. ... -+|=...+..
T Consensus 18 ~~~L~~~l~Sl~~Qt~~~~EII-iVdDgStD~t~~i~~~~~~~~~~i---~vi~~-~n~-G~~-------~arN~gl~~a 84 (328)
T PRK10073 18 GKDFRAFMESLIAQTWTALEII-IVNDGSTDNSVEIAKHYAENYPHV---RLLHQ-ANA-GVS-------VARNTGLAVA 84 (328)
T ss_pred HHHHHHHHHHHHhCCCCCeEEE-EEeCCCCccHHHHHHHHHhhCCCE---EEEEC-CCC-ChH-------HHHHHHHHhC
Confidence 356677788988653 334444 55666555555555443 2222 12221 111 111 1111111223
Q ss_pred cccEEEEEecceecccC-cccccC
Q 024367 114 EYSKMIYLDGDIQVFDN-IDHLFD 136 (268)
Q Consensus 114 ~~drvlYLD~D~lv~~~-l~eLf~ 136 (268)
..+=|+++|+|-.+..+ +..+.+
T Consensus 85 ~g~yi~flD~DD~~~p~~l~~l~~ 108 (328)
T PRK10073 85 TGKYVAFPDADDVVYPTMYETLMT 108 (328)
T ss_pred CCCEEEEECCCCccChhHHHHHHH
Confidence 45679999999998765 444544
No 87
>PF11735 CAP59_mtransfer: Cryptococcal mannosyltransferase 1 ; InterPro: IPR021047 The capsule of pathogenic fungi is a complex polysaccharide whose formation is determined by a number of enzymes including, most importantly, alpha-1,3-mannosyltransferase 1 [, ]. It is responsible for addition of mannose residues in an alpha-1,3 linkage to a polymannosly precursor.
Probab=29.30 E-value=1.7e+02 Score=25.00 Aligned_cols=25 Identities=20% Similarity=0.428 Sum_probs=20.2
Q ss_pred ccccEEEEEecceecc-cCcccccCCC
Q 024367 113 VEYSKMIYLDGDIQVF-DNIDHLFDLP 138 (268)
Q Consensus 113 ~~~drvlYLD~D~lv~-~~l~eLf~~~ 138 (268)
..++|||||+ |+++. .|+-+|+...
T Consensus 111 ~~fd~VlfLN-DV~f~~~Dil~LL~~~ 136 (241)
T PF11735_consen 111 RRFDKVLFLN-DVFFCPEDILELLFTR 136 (241)
T ss_pred CCcCEEEEec-CcccCHHHHHHHHhhc
Confidence 4699999999 86654 7899998874
No 88
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional
Probab=27.91 E-value=2.3e+02 Score=24.95 Aligned_cols=100 Identities=12% Similarity=0.044 Sum_probs=48.3
Q ss_pred EEEEEeecCcccHHHHHHHHHHHHhcCC---CCCEEEEECCCCCHHHHHHHHHcCCEEEE-ecccCC-CCchhhhhhccc
Q 024367 26 AYVTFLAGDGDYWKGVVGLVKGLRKAKS---KYPLLVAMLPDVPEEHRKILIEQGCILRE-IEPVYP-PENQTQFAMAYY 100 (268)
Q Consensus 26 a~~t~l~~d~~Y~~~~~vl~~Sl~~~~~---~~~ivvl~~~~i~~~~~~~L~~~~~~~~~-v~~l~~-~~~~~~~~~~~~ 100 (268)
+-+++-|.|. -..+.-++.|+.+... ...++ +++++-++...+.+++.+..++. ...+.. +.+. ...
T Consensus 33 vSVVIPayNe--e~~I~~~l~sl~~~~~~~~~~EII-VVDDgStD~T~~ia~~~~~~v~~~~~~~~~~~~n~-Gkg---- 104 (306)
T PRK13915 33 VSVVLPALNE--EETVGKVVDSIRPLLMEPLVDELI-VIDSGSTDATAERAAAAGARVVSREEILPELPPRP-GKG---- 104 (306)
T ss_pred EEEEEecCCc--HHHHHHHHHHHHHHhccCCCcEEE-EEeCCCccHHHHHHHHhcchhhcchhhhhccccCC-CHH----
Confidence 3334344443 3345566777765321 23343 56666666667777776654321 111110 1110 000
Q ss_pred cccchheeccccccccEEEEEeccee-c-ccCcccccC
Q 024367 101 VINYSKLRIWEFVEYSKMIYLDGDIQ-V-FDNIDHLFD 136 (268)
Q Consensus 101 ~~~~~KL~i~~l~~~drvlYLD~D~l-v-~~~l~eLf~ 136 (268)
.+..+ .......|-|+++|+|.. . -+.+..|.+
T Consensus 105 -~A~~~--g~~~a~gd~vv~lDaD~~~~~p~~l~~l~~ 139 (306)
T PRK13915 105 -EALWR--SLAATTGDIVVFVDADLINFDPMFVPGLLG 139 (306)
T ss_pred -HHHHH--HHHhcCCCEEEEEeCccccCCHHHHHHHHH
Confidence 01111 112235688999999997 4 334555554
No 89
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase. Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.
Probab=27.19 E-value=1.1e+02 Score=25.03 Aligned_cols=22 Identities=14% Similarity=0.232 Sum_probs=17.7
Q ss_pred cccEEEEEecceecccC-ccccc
Q 024367 114 EYSKMIYLDGDIQVFDN-IDHLF 135 (268)
Q Consensus 114 ~~drvlYLD~D~lv~~~-l~eLf 135 (268)
++|-++++|+|+.+-.+ ++++.
T Consensus 75 ~~d~v~~lD~D~~~~~~~l~~l~ 97 (237)
T cd02526 75 GADYVLLFDQDSVPPPDMVEKLL 97 (237)
T ss_pred CCCEEEEECCCCCcCHhHHHHHH
Confidence 68999999999998654 66663
No 90
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=23.97 E-value=1.9e+02 Score=23.94 Aligned_cols=24 Identities=8% Similarity=0.202 Sum_probs=16.7
Q ss_pred ccccEEEEEecceeccc-CcccccC
Q 024367 113 VEYSKMIYLDGDIQVFD-NIDHLFD 136 (268)
Q Consensus 113 ~~~drvlYLD~D~lv~~-~l~eLf~ 136 (268)
...+-++++|+|..... .+.++++
T Consensus 92 a~g~~i~~lD~D~~~~~~~l~~l~~ 116 (243)
T PLN02726 92 ASGDFVVIMDADLSHHPKYLPSFIK 116 (243)
T ss_pred cCCCEEEEEcCCCCCCHHHHHHHHH
Confidence 35678999999998643 3555554
No 91
>PF00578 AhpC-TSA: AhpC/TSA family; InterPro: IPR000866 Peroxiredoxins (Prxs) are a ubiquitous family of antioxidant enzymes that also control cytokine-induced peroxide levels which mediate signal transduction in mammalian cells. Prxs can be regulated by changes to phosphorylation, redox and possibly oligomerisation states. Prxs are divided into three classes: typical 2-Cys Prxs; atypical 2-Cys Prxs; and 1-Cys Prxs. All Prxs share the same basic catalytic mechanism, in which an active-site cysteine (the peroxidatic cysteine) is oxidised to a sulphenic acid by the peroxide substrate. The recycling of the sulphenic acid back to a thiol is what distinguishes the three enzyme classes. Using crystal structures, a detailed catalytic cycle has been derived for typical 2-Cys Prxs, including a model for the redox-regulated oligomeric state proposed to control enzyme activity []. Alkyl hydroperoxide reductase (AhpC) is responsible for directly reducing organic hyperoxides in its reduced dithiol form. Thiol specific antioxidant (TSA) is a physiologically important antioxidant which constitutes an enzymatic defence against sulphur-containing radicals. This family contains AhpC and TSA, as well as related proteins.; GO: 0016209 antioxidant activity, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1QMV_A 1PRX_B 3HJP_C 3HA9_A 2V41_G 2V32_C 2V2G_C 3LWA_A 3IA1_B 1ZYE_G ....
Probab=22.33 E-value=1.9e+02 Score=20.69 Aligned_cols=72 Identities=28% Similarity=0.254 Sum_probs=39.9
Q ss_pred CCCccccccc-ccccccCCCCCCCeEEEEEeecCcccHHHHHHHHHHHHhc-----CCCCCEEEEECCCCCHHHHHHHHH
Q 024367 2 APDITPTTIT-KTTSLSKAPSLPKRAYVTFLAGDGDYWKGVVGLVKGLRKA-----KSKYPLLVAMLPDVPEEHRKILIE 75 (268)
Q Consensus 2 ~~~~~~~~~~-~~~~~~~~~~~~~~a~~t~l~~d~~Y~~~~~vl~~Sl~~~-----~~~~~ivvl~~~~i~~~~~~~L~~ 75 (268)
||+++-++.. +++++++. ..+...+.+..+ ..++.+...+..|.+. ..+..++.+.. +-.++..+.+++
T Consensus 5 ~P~f~l~~~~g~~~~l~~l--~gk~~vl~f~~~--~~c~~c~~~l~~l~~~~~~~~~~~~~vi~is~-d~~~~~~~~~~~ 79 (124)
T PF00578_consen 5 APDFTLTDSDGKTVSLSDL--KGKPVVLFFWPT--AWCPFCQAELPELNELYKKYKDKGVQVIGIST-DDPEEIKQFLEE 79 (124)
T ss_dssp GGCEEEETTTSEEEEGGGG--TTSEEEEEEEST--TTSHHHHHHHHHHHHHHHHHHTTTEEEEEEES-SSHHHHHHHHHH
T ss_pred CCCcEeECCCCCEEEHHHH--CCCcEEEEEeCc--cCccccccchhHHHHHhhhhccceEEeeeccc-ccccchhhhhhh
Confidence 6777777666 67777777 446666555533 3556555555555432 22445554443 444445555665
Q ss_pred cCC
Q 024367 76 QGC 78 (268)
Q Consensus 76 ~~~ 78 (268)
.+.
T Consensus 80 ~~~ 82 (124)
T PF00578_consen 80 YGL 82 (124)
T ss_dssp HTC
T ss_pred hcc
Confidence 553
No 92
>COG5020 KTR1 Mannosyltransferase [Carbohydrate transport and metabolism]
Probab=22.06 E-value=3.6e+02 Score=24.76 Aligned_cols=53 Identities=17% Similarity=0.297 Sum_probs=37.2
Q ss_pred CCCeEEEEEeecCcccHHHHHHHHHHHHh-cCC--CCCEEEEECCCCCHHHHHHHHHc
Q 024367 22 LPKRAYVTFLAGDGDYWKGVVGLVKGLRK-AKS--KYPLLVAMLPDVPEEHRKILIEQ 76 (268)
Q Consensus 22 ~~~~a~~t~l~~d~~Y~~~~~vl~~Sl~~-~~~--~~~ivvl~~~~i~~~~~~~L~~~ 76 (268)
+++-.+++ ++.|.+ +.+++.+++|+.. .|. .||-+.+=++..+++.++...+.
T Consensus 80 r~natfv~-L~RN~d-L~~vl~Si~svE~rFNk~f~YpwvFLNdepFteeFk~~~~~~ 135 (399)
T COG5020 80 RENATFVM-LARNSD-LEDVLSSIRSVEDRFNKNFHYPWVFLNDEPFTEEFKEATSDI 135 (399)
T ss_pred CcccEEEE-EEechh-HHHHHHHHHHHHHHhhccCCCCeEEecCchhHHHHHHHHHHH
Confidence 45555655 667877 9999999999975 344 57877565555788877766653
No 93
>KOG4472 consensus Glycolipid 2-alpha-mannosyltransferase (alpha-1,2-mannosyltransferase) [Carbohydrate transport and metabolism]
Probab=22.06 E-value=3.6e+02 Score=24.76 Aligned_cols=53 Identities=17% Similarity=0.297 Sum_probs=37.2
Q ss_pred CCCeEEEEEeecCcccHHHHHHHHHHHHh-cCC--CCCEEEEECCCCCHHHHHHHHHc
Q 024367 22 LPKRAYVTFLAGDGDYWKGVVGLVKGLRK-AKS--KYPLLVAMLPDVPEEHRKILIEQ 76 (268)
Q Consensus 22 ~~~~a~~t~l~~d~~Y~~~~~vl~~Sl~~-~~~--~~~ivvl~~~~i~~~~~~~L~~~ 76 (268)
+++-.+++ ++.|.+ +.+++.+++|+.. .|. .||-+.+=++..+++.++...+.
T Consensus 80 r~natfv~-L~RN~d-L~~vl~Si~svE~rFNk~f~YpwvFLNdepFteeFk~~~~~~ 135 (399)
T KOG4472|consen 80 RENATFVM-LARNSD-LEDVLSSIRSVEDRFNKNFHYPWVFLNDEPFTEEFKEATSDI 135 (399)
T ss_pred CcccEEEE-EEechh-HHHHHHHHHHHHHHhhccCCCCeEEecCchhHHHHHHHHHHH
Confidence 45555655 667877 9999999999975 344 57877565555788877766653
No 94
>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2
Probab=21.90 E-value=2.2e+02 Score=19.61 Aligned_cols=18 Identities=17% Similarity=0.298 Sum_probs=12.9
Q ss_pred ccccEEEEEecceecccC
Q 024367 113 VEYSKMIYLDGDIQVFDN 130 (268)
Q Consensus 113 ~~~drvlYLD~D~lv~~~ 130 (268)
.+.+=++++|+|=++.-+
T Consensus 70 ~~~dWvl~~D~DEfl~~~ 87 (97)
T PF13704_consen 70 FDADWVLFLDADEFLVPP 87 (97)
T ss_pred CCCCEEEEEeeeEEEecC
Confidence 366788888888776543
No 95
>COG1216 Predicted glycosyltransferases [General function prediction only]
Probab=21.31 E-value=2.4e+02 Score=24.54 Aligned_cols=95 Identities=14% Similarity=0.099 Sum_probs=53.3
Q ss_pred CcccHHHHHHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHHc-CCEEEEecccCCCCchhhhhhccccccchheecccc
Q 024367 34 DGDYWKGVVGLVKGLRKAKSKYPLLVAMLPDVPEEHRKILIEQ-GCILREIEPVYPPENQTQFAMAYYVINYSKLRIWEF 112 (268)
Q Consensus 34 d~~Y~~~~~vl~~Sl~~~~~~~~ivvl~~~~i~~~~~~~L~~~-~~~~~~v~~l~~~~~~~~~~~~~~~~~~~KL~i~~l 112 (268)
+-+....+..++.|+.+.......+++++++-++...+.++.. ... |..+...+|. .++ ..+.+.....+
T Consensus 11 ~yn~~~~l~~~l~~l~~~~~~~~~iv~vDn~s~d~~~~~~~~~~~~~---v~~i~~~~Nl-G~a-----gg~n~g~~~a~ 81 (305)
T COG1216 11 TYNRGEDLVECLASLAAQTYPDDVIVVVDNGSTDGSLEALKARFFPN---VRLIENGENL-GFA-----GGFNRGIKYAL 81 (305)
T ss_pred ecCCHHHHHHHHHHHhcCCCCCcEEEEccCCCCCCCHHHHHhhcCCc---EEEEEcCCCc-cch-----hhhhHHHHHHh
Confidence 4567777888888888765544444455555555566666665 222 3333333332 122 12233222222
Q ss_pred cc-ccEEEEEecceec-ccCcccccCC
Q 024367 113 VE-YSKMIYLDGDIQV-FDNIDHLFDL 137 (268)
Q Consensus 113 ~~-~drvlYLD~D~lv-~~~l~eLf~~ 137 (268)
.+ ++-++.|+.|+++ -+.|.+|.+.
T Consensus 82 ~~~~~~~l~LN~D~~~~~~~l~~ll~~ 108 (305)
T COG1216 82 AKGDDYVLLLNPDTVVEPDLLEELLKA 108 (305)
T ss_pred cCCCcEEEEEcCCeeeChhHHHHHHHH
Confidence 33 3379999999777 3457788776
No 96
>KOG3887 consensus Predicted small GTPase involved in nuclear protein import [Intracellular trafficking, secretion, and vesicular transport]
Probab=20.73 E-value=2.4e+02 Score=24.45 Aligned_cols=47 Identities=11% Similarity=0.240 Sum_probs=33.7
Q ss_pred CCeEEEEEeecCcccHHHHHHHHHHHHh---cCCCCCEEEEE--CCCCCHHH
Q 024367 23 PKRAYVTFLAGDGDYWKGVVGLVKGLRK---AKSKYPLLVAM--LPDVPEEH 69 (268)
Q Consensus 23 ~~~a~~t~l~~d~~Y~~~~~vl~~Sl~~---~~~~~~ivvl~--~~~i~~~~ 69 (268)
...|.+.++.+-+.|+.+++.|..-+.+ -|++..+-+++ .++++++.
T Consensus 101 ~~gALifvIDaQddy~eala~L~~~v~raykvNp~in~EVfiHKvDGLsdd~ 152 (347)
T KOG3887|consen 101 GVGALIFVIDAQDDYMEALARLHMTVERAYKVNPNINFEVFIHKVDGLSDDF 152 (347)
T ss_pred ccCeEEEEEechHHHHHHHHHHHHHhhheeecCCCceEEEEEEeccCCchhh
Confidence 4456777777888999988887777654 47877765544 47888864
No 97
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation. UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.
Probab=20.02 E-value=82 Score=25.34 Aligned_cols=24 Identities=13% Similarity=0.235 Sum_probs=17.4
Q ss_pred cccEEEEEecceecccC-cccccCC
Q 024367 114 EYSKMIYLDGDIQVFDN-IDHLFDL 137 (268)
Q Consensus 114 ~~drvlYLD~D~lv~~~-l~eLf~~ 137 (268)
..+-|+++|+|.....+ +..+.+.
T Consensus 82 ~gd~i~~ld~D~~~~~~~l~~l~~~ 106 (211)
T cd04188 82 RGDYILFADADLATPFEELEKLEEA 106 (211)
T ss_pred cCCEEEEEeCCCCCCHHHHHHHHHH
Confidence 44789999999887654 6666553
Done!