Query 024367
Match_columns 268
No_of_seqs 148 out of 1151
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 07:01:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024367.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024367hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3u2u_A Glycogenin-1, GN-1, GN1 100.0 4.6E-45 1.6E-49 312.6 17.5 210 22-267 2-220 (263)
2 1ll2_A Glycogenin-1; protein-s 100.0 5.4E-41 1.9E-45 297.5 17.2 210 22-267 1-219 (333)
3 3tzt_A Glycosyl transferase fa 100.0 2E-36 6.9E-41 262.0 12.3 220 28-267 7-251 (276)
4 1g9r_A Glycosyl transferase; a 100.0 1.8E-34 6.2E-39 254.0 13.7 217 30-267 4-251 (311)
5 1o7q_A N-acetyllactosaminide a 87.1 4.2 0.00015 34.2 9.4 191 29-242 53-264 (289)
6 3ioh_A Histo-blood group ABO s 76.5 4 0.00014 34.5 5.4 60 182-241 205-272 (298)
7 1fo8_A Alpha-1,3-mannosyl-glyc 64.4 19 0.00065 31.1 7.3 97 31-131 9-116 (343)
8 4ayl_A BOGT-metal-independent 64.4 14 0.00049 30.3 6.1 190 29-241 6-217 (246)
9 2d7i_A Polypeptide N-acetylgal 61.1 7.2 0.00025 36.1 4.2 101 23-137 112-220 (570)
10 1qg8_A Protein (spore coat pol 58.5 7.5 0.00026 31.1 3.5 89 39-136 14-111 (255)
11 1s4n_A Glycolipid 2-alpha-mann 56.3 51 0.0017 28.5 8.3 204 18-225 22-275 (348)
12 2p6w_A VP54, putative glycosyl 55.8 33 0.0011 27.1 6.5 18 111-128 69-86 (213)
13 1xhb_A Polypeptide N-acetylgal 51.2 14 0.00048 33.0 4.3 25 113-137 113-138 (472)
14 3bcv_A Putative glycosyltransf 48.6 9.8 0.00034 30.1 2.6 23 114-136 84-107 (240)
15 3ckj_A Putative uncharacterize 46.7 29 0.00099 29.3 5.5 105 20-136 45-155 (329)
16 2z86_A Chondroitin synthase; G 45.9 89 0.003 28.7 9.1 100 24-136 94-197 (625)
17 3f1y_A Mannosyl-3-phosphoglyce 42.6 98 0.0033 26.9 8.3 99 29-136 99-203 (387)
18 3gl3_A Putative thiol:disulfid 30.6 1.3E+02 0.0044 21.2 6.2 75 2-78 9-85 (152)
19 2ffu_A Ppgalnact-2, polypeptid 25.1 1.2E+02 0.0042 27.0 6.1 25 113-137 145-170 (501)
20 3fw2_A Thiol-disulfide oxidore 24.4 1.9E+02 0.0064 20.4 8.8 79 2-80 11-95 (150)
No 1
>3u2u_A Glycogenin-1, GN-1, GN1; structural genomics, structural genomics consortium, SGC, transferase, glycosyltransferase, glycogen biosynthesis; HET: GLC UDP; 1.45A {Homo sapiens} SCOP: c.68.1.14 PDB: 3t7n_A* 3t7o_A* 3t7m_A* 3u2v_A* 3u2x_A* 3u2t_A 3rmv_A* 3rmw_A* 3u2w_A* 3qvb_A* 3q4s_A* 1zct_A* 3v8y_A 3v8z_A* 3usr_A 3v90_A 3v91_A* 3usq_A
Probab=100.00 E-value=4.6e-45 Score=312.61 Aligned_cols=210 Identities=29% Similarity=0.471 Sum_probs=178.7
Q ss_pred CCCeEEEEEeecCcccHHHHHHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHHcCCEEEEecccCCCCc--hhhhhhcc
Q 024367 22 LPKRAYVTFLAGDGDYWKGVVGLVKGLRKAKSKYPLLVAMLPDVPEEHRKILIEQGCILREIEPVYPPEN--QTQFAMAY 99 (268)
Q Consensus 22 ~~~~a~~t~l~~d~~Y~~~~~vl~~Sl~~~~~~~~ivvl~~~~i~~~~~~~L~~~~~~~~~v~~l~~~~~--~~~~~~~~ 99 (268)
.+++||||++ +|++|+++++++++||++++++++++++++++++++.++.|++.+..++.|+.+..... ...+.++.
T Consensus 2 ~~~~AyvTl~-td~~Yl~ga~vL~~SL~~~~s~~~lvvLvt~~vs~~~~~~L~~~~~~vi~V~~l~~~~~~~~~~~~rp~ 80 (263)
T 3u2u_A 2 MTDQAFVTLT-TNDAYAKGALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLETVFDEVIMVDVLDSGDSAHLTLMKRPE 80 (263)
T ss_dssp TTTEEEEEEE-SSHHHHHHHHHHHHHHHHTTCCSEEEEEECTTSCHHHHHHHHHHSSEEEECCCCCCCCHHHHHHTTCTT
T ss_pred CcceEEEEEE-ECHHHHHHHHHHHHHHHHhCCCCCEEEEecCCCCHHHHHHHHHcCCeEEEeeecCCcchhhhhhhcCcc
Confidence 4689999954 79999999999999999999999999999999999999999999999988888775321 11233344
Q ss_pred ccccchheeccccccccEEEEEecceecccCcccccCCCCCceeeeecccccCCCCCCCcccccccccCCCCCCCCccCC
Q 024367 100 YVINYSKLRIWEFVEYSKMIYLDGDIQVFDNIDHLFDLPDGYFYAVMDCFCEKTWSHTPQFKIGYCQQCPDKVKWPAELG 179 (268)
Q Consensus 100 ~~~~~~KL~i~~l~~~drvlYLD~D~lv~~~l~eLf~~~~~~iaav~d~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~g 179 (268)
+..+|+||.+|++.+||||||||+|++|++|+++||+++ .+||++|. +||
T Consensus 81 ~~~~~~kl~~~~l~~~~~vlylD~D~~v~~~~~~Lf~~~--~~aA~~d~------------------------~~~---- 130 (263)
T 3u2u_A 81 LGVTLTKLHCWSLTQYSKCVFMDADTLVLANIDDLFDRE--ELSAAPDP------------------------GWP---- 130 (263)
T ss_dssp GGGGGGGGGGGGCTTCSEEEEECTTEEECSCCGGGGGSC--SSEEEECT------------------------TST----
T ss_pred hhHHhHHHHhccccCcceEEEEcCCEeeccCHHHHhCCC--cceEeccC------------------------CCC----
Confidence 567999999999999999999999999999999999997 48888762 332
Q ss_pred CCCCCCccceEEEEecCHHHHHHHHHHhhccCCCCCCChHHHHHHHcc-----CccccCCcccccccccccCCCccc--C
Q 024367 180 PKPALYFNAGMFVFEPSLSTYHDLLETVQITTPTSFAEQDFLNMYFRD-----IYRPIPPIYNLVVAMLWRHPENVE--A 252 (268)
Q Consensus 180 ~~~~~yfNsGv~li~~~~~~~~~l~~~~~~~~~~~~~DQd~LN~~~~~-----~~~~Lp~~yN~~~~~~~~~~~~~~--~ 252 (268)
.||||||||++++...++++++.+.+..++.++|||+||.+|.+ +++.||.+||++....|.+...+. .
T Consensus 131 ----~~fNsGv~li~p~~~~~~~l~~~~~~~~~~~~~DQd~LN~~f~~w~~~~~~~~Lp~~yN~~~~~~y~~~~~~~~~~ 206 (263)
T 3u2u_A 131 ----DCFNSGVFVYQPSVETYNQLLHLASEQGSFDGGDQGILNTFFSSWATTDIRKHLPFIYNLSSISIYSYLPAFKVFG 206 (263)
T ss_dssp ----TSEEEEEEEECCCHHHHHHHHHHHHHHCCTTSSHHHHHHHHTTTTTTSCGGGBCCGGGSEEHHHHHSSHHHHHHHG
T ss_pred ----ccccCeEEEEcccHHHHHHHHHHHHhcCCCCcccHHHHHHHhccccccCeeEeCCcccccccchhccccHHHHhhc
Confidence 79999999999999999999999877667889999999999987 789999999999865554433332 5
Q ss_pred CCceEEEeecCCCCC
Q 024367 253 DKAKVVHYCAAVSTI 267 (268)
Q Consensus 253 ~~~~IiHf~g~~~KP 267 (268)
++++||||+| +.||
T Consensus 207 ~~~~IIHf~g-~~KP 220 (263)
T 3u2u_A 207 ASAKVVHFLG-RVKP 220 (263)
T ss_dssp GGCSEEECCS-SSCG
T ss_pred CCeEEEEECC-CCcC
Confidence 7899999999 7898
No 2
>1ll2_A Glycogenin-1; protein-substrate complex, beta-alpha-beta rossman-like NUCL binding fold, DXD motif, non-proline CIS peptide bond, TRAN; HET: UPG; 1.90A {Oryctolagus cuniculus} SCOP: c.68.1.14 PDB: 1ll3_A 1ll0_A 1zcv_A 1zcu_A 1zdf_A* 1zcy_A 1zdg_A*
Probab=100.00 E-value=5.4e-41 Score=297.52 Aligned_cols=210 Identities=28% Similarity=0.452 Sum_probs=173.3
Q ss_pred CCCeEEEEEeecCcccHHHHHHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHHcCCEEEEecccCCCC--chhhhhhcc
Q 024367 22 LPKRAYVTFLAGDGDYWKGVVGLVKGLRKAKSKYPLLVAMLPDVPEEHRKILIEQGCILREIEPVYPPE--NQTQFAMAY 99 (268)
Q Consensus 22 ~~~~a~~t~l~~d~~Y~~~~~vl~~Sl~~~~~~~~ivvl~~~~i~~~~~~~L~~~~~~~~~v~~l~~~~--~~~~~~~~~ 99 (268)
+++.||+|+ ++|++|++++.|+++||++++++++++++++++++++.++.|++.+..++.|+.+.... ....+.+++
T Consensus 1 Ms~~a~vt~-~~d~~Yl~~a~vl~~SL~~~~s~~~l~vlv~~~is~~~~~~L~~~~~~v~~v~~l~~~~~~~~~~~~~~~ 79 (333)
T 1ll2_A 1 MTDQAFVTL-TTNDAYAKGALVLGSSLKQHRTSRRLAVLTTPQVSDTMRKALEIVFDEVITVDILDSGDSAHLTLMKRPE 79 (333)
T ss_dssp CCSEEEEEE-ESSHHHHHHHHHHHHHHHHTTCCSEEEEEECTTSCHHHHHHHHHHCSEEEECCTTSTTSTTHHHHHHCGG
T ss_pred CCceEEEEE-EeCHHHHHHHHHHHHHHHHhCCCCCEEEEEcCCCCHHHHHHHHHhCCEEEEEeecCCcchhhcccccccc
Confidence 368999995 57999999999999999999999999989999999999999999998888887765432 111122334
Q ss_pred ccccchheeccccccccEEEEEecceecccCcccccCCCCCceeeeecccccCCCCCCCcccccccccCCCCCCCCccCC
Q 024367 100 YVINYSKLRIWEFVEYSKMIYLDGDIQVFDNIDHLFDLPDGYFYAVMDCFCEKTWSHTPQFKIGYCQQCPDKVKWPAELG 179 (268)
Q Consensus 100 ~~~~~~KL~i~~l~~~drvlYLD~D~lv~~~l~eLf~~~~~~iaav~d~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~g 179 (268)
+..+|+||++|++.+|+||||||+|++|++||++||+++ .++||+| .+||
T Consensus 80 ~~~t~~Kl~i~~l~~ydrvlYLDaD~lv~~di~eLf~~~--~~aAv~d------------------------~~~~---- 129 (333)
T 1ll2_A 80 LGVTLTKLHCWSLTQYSKCVFMDADTLVLANIDDLFERE--ELSAAPD------------------------PGWP---- 129 (333)
T ss_dssp GHHHHHHGGGGGCTTCSEEEEECTTEEECSCCGGGGGSC--SSEEEEC------------------------SSST----
T ss_pred hHHHHHHHHHhHhcCCCeEEEEeCCEEeccCHHHHhCCC--ceeEEec------------------------CCCC----
Confidence 567899999999999999999999999999999999997 4888865 2332
Q ss_pred CCCCCCccceEEEEecCHHHHHHHHHHhhccCCCCCCChHHHHHHHccCc-----cccCCcccccccccccCCCcc--cC
Q 024367 180 PKPALYFNAGMFVFEPSLSTYHDLLETVQITTPTSFAEQDFLNMYFRDIY-----RPIPPIYNLVVAMLWRHPENV--EA 252 (268)
Q Consensus 180 ~~~~~yfNsGv~li~~~~~~~~~l~~~~~~~~~~~~~DQd~LN~~~~~~~-----~~Lp~~yN~~~~~~~~~~~~~--~~ 252 (268)
.||||||||+|++...++++++.+.+..++.++||++||.+|.+.. ..||.+||++....+.+...+ ..
T Consensus 130 ----~~fNsGvmlin~~~~~~~~l~~~~~~~~~~~~~DQ~~LN~~f~~~~~~~~~~~Lp~~yN~~~~~~~~~~p~~~~~~ 205 (333)
T 1ll2_A 130 ----DCFNSGVFVYQPSVETYNQLLHVASEQGSFDGGDQGLLNTFFNSWATTDIRKHLPFIYNLSSISIYSYLPAFKAFG 205 (333)
T ss_dssp ----TSEEEEEEEECCCHHHHHHHHHHHHHTCCTTSSHHHHHHHHTTTTTTSCGGGBCCGGGSEETTHHHHTHHHHHHHG
T ss_pred ----cceeeeEEEEeCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHhhcccCccccCCcHHhcccccchhccHHHHhhc
Confidence 6899999999999999999999987766788899999999998633 799999999876433321112 15
Q ss_pred CCceEEEeecCCCCC
Q 024367 253 DKAKVVHYCAAVSTI 267 (268)
Q Consensus 253 ~~~~IiHf~g~~~KP 267 (268)
++++||||+| ..||
T Consensus 206 ~~~~IiHf~g-~~KP 219 (333)
T 1ll2_A 206 ANAKVVHFLG-QTKP 219 (333)
T ss_dssp GGCSEEECCS-SCCG
T ss_pred CCCEEEEECC-CCCC
Confidence 7899999999 7798
No 3
>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0
Probab=100.00 E-value=2e-36 Score=262.00 Aligned_cols=220 Identities=20% Similarity=0.277 Sum_probs=145.1
Q ss_pred EEEeecCcccHHHHHHHHHHHHhcCCCCCEEE-EECCCCCHHHHHHHHHc----CCEEEEecccCCCCchhhhh--hccc
Q 024367 28 VTFLAGDGDYWKGVVGLVKGLRKAKSKYPLLV-AMLPDVPEEHRKILIEQ----GCILREIEPVYPPENQTQFA--MAYY 100 (268)
Q Consensus 28 ~t~l~~d~~Y~~~~~vl~~Sl~~~~~~~~ivv-l~~~~i~~~~~~~L~~~----~~~~~~v~~l~~~~~~~~~~--~~~~ 100 (268)
.+++|+|++|+.++.|+++||++++++.++.+ ++++++++++++.|++. ++.+..++. +. +..+.++ .+++
T Consensus 7 ~I~~~~d~~Y~~~~~v~i~Sl~~~~~~~~~~~~il~~~is~~~~~~L~~~~~~~~~~i~~~~~-~~-~~~~~~~~~~~~s 84 (276)
T 3tzt_A 7 ALLLTLDENYIPQMKVLMTSIYINNPGRIFDVYLIHSRISEDKLKDLGEDLKKFSYTLYPIRA-TD-DLFSFAKVTDRYP 84 (276)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHHHSTTCCEEEEEEESCCCHHHHHHHHHHHHTTTCEEEEEEC-C--------------C
T ss_pred EEEEEeCHhHHHHHHHHHHHHHHhCCCCceEEEEEeCCCCHHHHHHHHHHHHHcCCEEEEEEe-CH-HHHhcCccccccC
Confidence 34477899999999999999999988655533 55788999998877763 454432221 11 1111221 1234
Q ss_pred cccchheeccccc--cccEEEEEecceecccCcccccCCC--CCceeeeecccccCCCCCCCcccccccccCCCCCCCCc
Q 024367 101 VINYSKLRIWEFV--EYSKMIYLDGDIQVFDNIDHLFDLP--DGYFYAVMDCFCEKTWSHTPQFKIGYCQQCPDKVKWPA 176 (268)
Q Consensus 101 ~~~~~KL~i~~l~--~~drvlYLD~D~lv~~~l~eLf~~~--~~~iaav~d~~~~~~~~~~p~~~~~~~~~~p~~~~~~~ 176 (268)
..+|+||+++++. +++||||||+|++|++||+|||+++ +..+|||+|+.... +.. .. . ..
T Consensus 85 ~~~~~rl~~~~l~p~~~~kvlylD~D~iv~~di~~L~~~dl~~~~~aav~d~~~~~-~~~------~~----~-~~---- 148 (276)
T 3tzt_A 85 KEMYYRLLAGEFLPENLGEILYLDPDMLVINPLDDLLRTDISDYILAAASHTGKTD-MAN------NV----N-RI---- 148 (276)
T ss_dssp HHHHHHHTHHHHSCTTCCEEEEECSSEEECSCSHHHHTCCCTTSSEEEEEC-----------------------------
T ss_pred HHHHHHHHHHHHcccccCeEEEEeCCeeecCCHHHHhhcCCCCCeEEEEEecccch-HHH------HH----H-Hh----
Confidence 5789999999985 5899999999999999999999985 45799999875321 000 00 0 11
Q ss_pred cCCCCCCCCccceEEEEecCHHHH----HHHHHHhhccC-CCCCCChHHHHHHHccCccccCC-cccccccccc----cC
Q 024367 177 ELGPKPALYFNAGMFVFEPSLSTY----HDLLETVQITT-PTSFAEQDFLNMYFRDIYRPIPP-IYNLVVAMLW----RH 246 (268)
Q Consensus 177 ~~g~~~~~yfNsGv~li~~~~~~~----~~l~~~~~~~~-~~~~~DQd~LN~~~~~~~~~Lp~-~yN~~~~~~~----~~ 246 (268)
.++ .+..||||||||+|+++|+. +++++++++.. ++.++|||+||.+|.++|+.||. +||++.+... ..
T Consensus 149 ~l~-~~~~yfNsGV~linl~~~R~~~~~~~~~~~~~~~~~~~~~~DQd~LN~~f~~~~~~Lp~~~wN~~~~~~~~~~~~~ 227 (276)
T 3tzt_A 149 RLG-TDTDYYNSGLLLINLKRAREEIDPDEIFSFVEDNHMNLLLPDQDILNAMYGDRIYPLDDLIYNYDARNYSSYLIRS 227 (276)
T ss_dssp --------CEEEEEEEEEHHHHHHHCCHHHHHHHHHHC--------CHHHHHHHGGGEEEEEHHHHSEETTCHHHHHHHT
T ss_pred cCC-CCCCeEEeeEEEEEHHHHHhhhHHHHHHHHHHhccccccCCChhHHHHHHhCCEEECCchheeeecccchhhhccc
Confidence 111 12489999999999999875 55666665543 56789999999999999999999 9999875321 11
Q ss_pred CCcc----cCCCceEEEeecCCCCC
Q 024367 247 PENV----EADKAKVVHYCAAVSTI 267 (268)
Q Consensus 247 ~~~~----~~~~~~IiHf~g~~~KP 267 (268)
...+ ..++++||||+| ..||
T Consensus 228 ~~~~~~~~~~~~~~iiHy~g-~~KP 251 (276)
T 3tzt_A 228 KKQADLAWLMDHTVVLHFCG-RDKP 251 (276)
T ss_dssp TTCCSHHHHHHHCCEEECCS-SCCT
T ss_pred cchhhhhhhccCCeEEEECC-CCCC
Confidence 1112 256899999999 6898
No 4
>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A*
Probab=100.00 E-value=1.8e-34 Score=254.00 Aligned_cols=217 Identities=24% Similarity=0.396 Sum_probs=153.3
Q ss_pred EeecCcccHHHHHHHHHHH-HhcCC-CCCEEEEECCCCCHHHHHHHHHc----CCEEEEecccCCCCchhhhhh---ccc
Q 024367 30 FLAGDGDYWKGVVGLVKGL-RKAKS-KYPLLVAMLPDVPEEHRKILIEQ----GCILREIEPVYPPENQTQFAM---AYY 100 (268)
Q Consensus 30 ~l~~d~~Y~~~~~vl~~Sl-~~~~~-~~~ivvl~~~~i~~~~~~~L~~~----~~~~~~v~~l~~~~~~~~~~~---~~~ 100 (268)
++|+|++|+.++.|+++|| +++++ +..+++ ++++++++.++.|++. +..+..++ ++. +....++. ..+
T Consensus 4 ~~~~d~~Y~~~~~vli~Sl~l~~~~~~~~f~i-l~~~ls~~~~~~L~~~~~~~~~~i~~~~-~~~-~~~~~~~~~~~~~s 80 (311)
T 1g9r_A 4 VFAADDNYAAYLCVAAKSVEAAHPDTEIRFHV-LDAGISEANRAAVAANLRGGGGNIRFID-VNP-EDFAGFPLNIRHIS 80 (311)
T ss_dssp EEEECGGGHHHHHHHHHHHHHTCTTSCCEEEE-EESSCCHHHHHHHHHHSGGGTTTEEEEE-CCG-GGGTTSCCCCTTCC
T ss_pred EEECCHhHHHHHHHHHHHHHHHcCCCCceEEE-EECCCCHHHHHHHHHHHHHcCCEEEEEE-cCH-HHHhcCccccccCC
Confidence 3567999999999999999 66543 344554 4788999998888875 44432221 111 11112221 224
Q ss_pred cccchheecccc-ccccEEEEEecceecccCcccccCCC--CCceeeeecccccCCCCCCCcccccccccCCCCCCCCcc
Q 024367 101 VINYSKLRIWEF-VEYSKMIYLDGDIQVFDNIDHLFDLP--DGYFYAVMDCFCEKTWSHTPQFKIGYCQQCPDKVKWPAE 177 (268)
Q Consensus 101 ~~~~~KL~i~~l-~~~drvlYLD~D~lv~~~l~eLf~~~--~~~iaav~d~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~ 177 (268)
..+|+||++|++ .+++||||||+|++|++||++||+++ +..+|||+|+.+.. .+.+. ..++++
T Consensus 81 ~~~y~Rl~l~~ll~~~~kvlyLD~D~iv~~di~eL~~~~l~~~~~aav~d~~~~~----~~~~~--------~~~~~~-- 146 (311)
T 1g9r_A 81 ITTYARLKLGEYIADCDKVLYLDIDVLVRDSLTPLWDTDLGDNWLGASIDLFVER----QEGYK--------QKIGMA-- 146 (311)
T ss_dssp GGGGGGGGHHHHCCSCSCEEEECSSEEECSCCHHHHTCCCTTCSEEEEECHHHHT----STTHH--------HHTTCC--
T ss_pred HHHHHHHHHHHHhhhcCEEEEEcCCeEeccCHHHHhccCCCCcEEEEEeccchhh----hHHHH--------HhcCCC--
Confidence 578999999996 58999999999999999999999985 55799999876431 00000 012211
Q ss_pred CCCCCCCCccceEEEEecCHHH----HHHHHHHhhcc-CCCCCCChHHHHHHHccCccccCCccccccccc-----ccC-
Q 024367 178 LGPKPALYFNAGMFVFEPSLST----YHDLLETVQIT-TPTSFAEQDFLNMYFRDIYRPIPPIYNLVVAML-----WRH- 246 (268)
Q Consensus 178 ~g~~~~~yfNsGv~li~~~~~~----~~~l~~~~~~~-~~~~~~DQd~LN~~~~~~~~~Lp~~yN~~~~~~-----~~~- 246 (268)
....||||||||+|+++|+ .+++++++++. .++.++|||+||.+|.++|..||.+||++.... |..
T Consensus 147 ---~~~~yfNsGv~linl~~~r~~~~~~~~~~~~~~~~~~~~~~DQd~lN~~f~~~~~~Lp~~wN~~~~~~~~~~~~~~~ 223 (311)
T 1g9r_A 147 ---DGEYYFNAGVLLINLKKWRRHDIFKMSSEWVEQYKDVMQYQDQDILNGLFKGGVCYANSRFNFMPTNYAFMANWFAS 223 (311)
T ss_dssp ---TTSCCEEEEEEEECHHHHTTSCHHHHHHHHHHHHTTTCSSHHHHHHHHHHTTSEEEECGGGSBCHHHHHTCC----C
T ss_pred ---CCCceEeeeeeeeeHHHHHhcchHHHHHHHHHhccCcCccCCcCHHHHHHcCCEEEcChhhccCcchhhHHhhhccc
Confidence 2357999999999999875 56777777654 357899999999999999999999999987542 111
Q ss_pred C--Ccc------cCCCceEEEeecCCCCC
Q 024367 247 P--ENV------EADKAKVVHYCAAVSTI 267 (268)
Q Consensus 247 ~--~~~------~~~~~~IiHf~g~~~KP 267 (268)
+ ..| ..++++||||+| ..||
T Consensus 224 ~~~~~~~~~~~~~~~~~~iiHy~g-~~KP 251 (311)
T 1g9r_A 224 RHTDPLYRDRTNTVMPVAVSHYCG-PAKP 251 (311)
T ss_dssp SCCCHHHHHHHSCCSSCSEEECCS-SCCT
T ss_pred ccchhhhhHHhhccCCCEEEEeCC-cCCC
Confidence 1 111 146899999999 6798
No 5
>1o7q_A N-acetyllactosaminide alpha-1,3- galactosyltransferase; 3-galactosyltransferase-UDP complex, glycosyltransferase, glycoprotein, transmembrane; HET: GAL NAG UDP; 1.3A {Bos taurus} SCOP: c.68.1.9 PDB: 1gwv_A* 1gx0_A* 1gww_A* 1k4v_A* 1gx4_A* 2jco_A 1g8o_A* 1fg5_N* 1g93_A* 2wgz_A* 1o7o_A* 2vs4_A* 2jck_A* 2jcl_A 2vfz_A* 2vs3_A* 1vzu_A* 1vzx_A* 1vzt_A* 2jcj_A* ...
Probab=87.07 E-value=4.2 Score=34.23 Aligned_cols=191 Identities=16% Similarity=0.260 Sum_probs=93.6
Q ss_pred EEeecCcccH-HHHHHHHHHHHhcC-CCCCEE-EEECCCCCHHHHHHHHHcC-CEEEEecccCCCCchhhhhhccccccc
Q 024367 29 TFLAGDGDYW-KGVVGLVKGLRKAK-SKYPLL-VAMLPDVPEEHRKILIEQG-CILREIEPVYPPENQTQFAMAYYVINY 104 (268)
Q Consensus 29 t~l~~d~~Y~-~~~~vl~~Sl~~~~-~~~~iv-vl~~~~i~~~~~~~L~~~~-~~~~~v~~l~~~~~~~~~~~~~~~~~~ 104 (268)
+++| -..|. ....-.+.|-.++- +++.+. ++.||+.+. ...+ ..+ .+-+.|..+.... .+...++
T Consensus 53 ~vfa-~GkY~~~fl~~Fl~SAEk~Fm~g~~v~YYVFTD~~~~--~p~v-~l~~~r~~~V~~i~~~~-------~W~d~sm 121 (289)
T 1o7q_A 53 TVFA-VGRYIEHYLEEFLTSANKHFMVGHPVIFYIMVDDVSR--MPLI-ELGPLRSFKVFKIKPEK-------RWQDISM 121 (289)
T ss_dssp EEEE-CTTHHHHHHHHHHHHHHHHBSTTSCEEEEEEESCGGG--CCCC-CCCTTEEEEEEECCCCS-------SHHHHHH
T ss_pred EEEE-ecccHHHHHHHHHHHHHHhccCCCeEEEEEEeCChhh--CCcc-ccCCCCeEEEEEecccc-------CCchhHH
Confidence 3344 46898 88888888987752 445543 355654211 0000 011 1112222222110 1112233
Q ss_pred hheec------ccc-ccccEEEEEecceecccCcc-cccCCCCCceeeeecccccCCCCCCCcccccccccCCC-CCCCC
Q 024367 105 SKLRI------WEF-VEYSKMIYLDGDIQVFDNID-HLFDLPDGYFYAVMDCFCEKTWSHTPQFKIGYCQQCPD-KVKWP 175 (268)
Q Consensus 105 ~KL~i------~~l-~~~drvlYLD~D~lv~~~l~-eLf~~~~~~iaav~d~~~~~~~~~~p~~~~~~~~~~p~-~~~~~ 175 (268)
.|+.+ -++ .+.|=+.++|+|+++.+++. |.+ . ..+|...- .+-..+....-+ ...|. ..-.|
T Consensus 122 ~Rm~~i~~~~~~~~~~evDYLf~~dvd~~F~~~vG~E~L--g-~lv~~lHp-----~~y~~~~~~fpY-ERrp~S~AyIp 192 (289)
T 1o7q_A 122 MRMKTIGEHIVAHIQHEVDFLFCMDVDQVFQDKFGVETL--G-ESVAQLQA-----WWYKADPNDFTY-ERRKESAAYIP 192 (289)
T ss_dssp HHHHHHHHHHHHTHHHHCSEEEEECSSEEECSCBCGGGC--S-SEEEEECT-----TTTTSCGGGSCC-CCCTTSTTCCC
T ss_pred HHHHHHHHHHHHHHhhcCCEEEEeeCCcEeeccCCHHHH--H-HHHHccCH-----HHhCCCCCCCCC-CCCcCceeeec
Confidence 44322 222 37899999999999999876 222 1 12332211 111111000000 00000 00001
Q ss_pred ccCCCCCCCCccceEEEEecCH------HHHHHHHHHhhccCCCCCCChHHHHHHHc--cCccccCCcccccccc
Q 024367 176 AELGPKPALYFNAGMFVFEPSL------STYHDLLETVQITTPTSFAEQDFLNMYFR--DIYRPIPPIYNLVVAM 242 (268)
Q Consensus 176 ~~~g~~~~~yfNsGv~li~~~~------~~~~~l~~~~~~~~~~~~~DQd~LN~~~~--~~~~~Lp~~yN~~~~~ 242 (268)
.. ...-|+-+|+.-=.+.. .-.+.+++-.++.-...++|..-||.+|- ...+.||+.|++....
T Consensus 193 ~~---eGdfYY~Ga~fGGt~~~vl~l~~~c~~~i~~D~~n~I~A~wHDESHLNKYf~~~KPtKvLSPEY~wd~~~ 264 (289)
T 1o7q_A 193 FG---EGDFYYHAAIFGGTPTQVLNITQECFKGILKDKKNDIEAQWHDESHLNKYFLLNKPTKILSPEYCWDYHI 264 (289)
T ss_dssp TT---CCSCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHTTCCCTTTHHHHHHHHHHHSCCSEEECGGGSBCGGG
T ss_pred CC---CCCEEEEceeeCCcHHHHHHHHHHHHHHHHHHHhCCeEEEecchhhhhHHHhhcCCCEEECHHHCCCccc
Confidence 11 23578888888666554 11222333333333467899999999863 4568899999977653
No 6
>3ioh_A Histo-blood group ABO system transferase; GTA, cisab mutant, AA(Gly)B, rossman fold, unliganded, conformation, blood group antigen, glycoprotein; HET: GOL; 1.25A {Homo sapiens} SCOP: c.68.1.9 PDB: 3ioi_A* 3ioj_A* 3u0y_A* 3u0x_A* 1zhj_A* 2o1h_A* 2o1g_A* 3sx5_A* 3sx3_A* 2o1f_A 2rj6_A* 2rj5_A* 2rj7_A* 1zi4_A* 2y7a_A* 3sxb_A* 3sxa_A* 2riz_A 2rj0_A* 2rj1_A* ...
Probab=76.46 E-value=4 Score=34.54 Aligned_cols=60 Identities=12% Similarity=0.181 Sum_probs=39.5
Q ss_pred CCCCccceEEEEecCH------HHHHHHHHHhhccCCCCCCChHHHHHHHc--cCccccCCccccccc
Q 024367 182 PALYFNAGMFVFEPSL------STYHDLLETVQITTPTSFAEQDFLNMYFR--DIYRPIPPIYNLVVA 241 (268)
Q Consensus 182 ~~~yfNsGv~li~~~~------~~~~~l~~~~~~~~~~~~~DQd~LN~~~~--~~~~~Lp~~yN~~~~ 241 (268)
..-|+-+|++-=.+.. .-.+.+++-.++.-...++|..-||.+|- ...+.||+.|++...
T Consensus 205 GdfYY~ga~fGGt~~~vl~Lt~~C~~~i~~D~~n~IeA~WhDESHLNKYfl~hKPtKvLSPEY~Wd~~ 272 (298)
T 3ioh_A 205 GDFYYGGAFFGGSVQEVQRLTRACHQAMMVDQANGIEAVWHDESHLNKYLLRHKPTKVLSPEYLWDQQ 272 (298)
T ss_dssp CSCCBCTTEEEEEHHHHHHHHHHHHHHHHHHHHTTCCCTTTHHHHHHHHHHHSCCSEEECGGGSBCHH
T ss_pred CCeEEeeeecCCcHHHHHHHHHHHHHHHHHHHhCCceEeccchhhhhhhhhhcCCCceeCHHHcCCcc
Confidence 3578888888666554 11222333333333567899999999875 346899999997653
No 7
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=64.39 E-value=19 Score=31.14 Aligned_cols=97 Identities=14% Similarity=0.202 Sum_probs=49.9
Q ss_pred eecCcccHHHHHHHHHHHHhcCCCC--CEEEEECCCCCHHHHHHHHHcCCEEEEecccCC------CCchhhhhh-cccc
Q 024367 31 LAGDGDYWKGVVGLVKGLRKAKSKY--PLLVAMLPDVPEEHRKILIEQGCILREIEPVYP------PENQTQFAM-AYYV 101 (268)
Q Consensus 31 l~~d~~Y~~~~~vl~~Sl~~~~~~~--~ivvl~~~~i~~~~~~~L~~~~~~~~~v~~l~~------~~~~~~~~~-~~~~ 101 (268)
++.|.. . +.-++.||++..+.. ..+++..|+-.++.++.+++.+..+..+..-+. +++. .+.. ....
T Consensus 9 ~~yNRp--~-l~~~L~sL~~~~p~~~~~~iivsdDgs~~~~~~vi~~~~~~I~~~~~~d~~~~~~~~~N~-g~~~y~~ia 84 (343)
T 1fo8_A 9 IACDRS--T-VRRCLDKLLHYRPSAELFPIIVSQDCGHEETAQVIASYGSAVTHIRQPDLSNIAVQPDHR-KFQGYYKIA 84 (343)
T ss_dssp EESSCT--T-HHHHHHHHHHHCSCTTTSCEEEEECTTCHHHHHHHHTTGGGSEEEECSCCCCCCCCTTCG-GGHHHHHHH
T ss_pred EECCcH--H-HHHHHHHHHhcCCCcCCcEEEEEECCCCHHHHHHHHHcCCceEEEEcCCccccccchhhc-CcccchhHh
Confidence 445655 3 777788998876422 223355667777778877775432221111110 1111 0100 0000
Q ss_pred cc--chheeccccccccEEEEEecceecccCc
Q 024367 102 IN--YSKLRIWEFVEYSKMIYLDGDIQVFDNI 131 (268)
Q Consensus 102 ~~--~~KL~i~~l~~~drvlYLD~D~lv~~~l 131 (268)
.. +..=.++....++++|+||-|+++-.+.
T Consensus 85 ~h~~~al~~vf~~~~~~~vIiLEDDl~~spdF 116 (343)
T 1fo8_A 85 RHYRWALGQIFHNFNYPAAVVVEDDLEVAPDF 116 (343)
T ss_dssp HHHHHHHHHHHTTSCCSEEEEEETTEEECTTH
T ss_pred HHHHHHHHHHHHhccCCEEEEEcCCCeECHHH
Confidence 00 1111223334699999999999997764
No 8
>4ayl_A BOGT-metal-independent glycosyltransferase; histo-blood group enzyme; HET: EPE; 1.92A {Bacteroides ovatus} PDB: 4ayj_A*
Probab=64.38 E-value=14 Score=30.27 Aligned_cols=190 Identities=8% Similarity=0.063 Sum_probs=88.7
Q ss_pred EEeecCcccHHHHHHHHHHHHhc-CCCCC--EE-EEECCCCCHHHHHHHHHcCCEEEEecccCCCCchhhhhhccccccc
Q 024367 29 TFLAGDGDYWKGVVGLVKGLRKA-KSKYP--LL-VAMLPDVPEEHRKILIEQGCILREIEPVYPPENQTQFAMAYYVINY 104 (268)
Q Consensus 29 t~l~~d~~Y~~~~~vl~~Sl~~~-~~~~~--iv-vl~~~~i~~~~~~~L~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~ 104 (268)
|++| -.+|...+.-.+.|-.++ -++.+ +. ++.+|+...- .. ...+..++.+ -....++ ..+.
T Consensus 6 ~vfA-~GkY~~fl~~Fl~SAek~Fm~g~~~~V~yYVFTD~~~~v--p~-~~~~~v~~~~--~~~~~Wq--------d~sm 71 (246)
T 4ayl_A 6 LYIC-TGKYDIFWKDFYLSAERYFMQDQSFIIEYYVFTDSPKLY--DE-ENNKHIHRIK--QKNLGWP--------DNTL 71 (246)
T ss_dssp EEEC-CGGGGGGHHHHHHHHHHHBSCSTTSEEEEEEEESCSCCT--TT-TTCTTEEEEE--CCCCCTT--------HHHH
T ss_pred EEEE-eCcHHHHHHHHHHhHHHhccCCCccceEEEEEeCChhhC--Cc-CCCceEEEEe--CCcCCCc--------ccch
Confidence 4454 468888888888998875 35555 42 3456543210 00 0011111111 0111111 1122
Q ss_pred hhee-----ccccc-cccEEEEEecceecccCcc-ccc-CCCCCc-eeeeecccccCCCCCCCcccccccccCCC-CCCC
Q 024367 105 SKLR-----IWEFV-EYSKMIYLDGDIQVFDNID-HLF-DLPDGY-FYAVMDCFCEKTWSHTPQFKIGYCQQCPD-KVKW 174 (268)
Q Consensus 105 ~KL~-----i~~l~-~~drvlYLD~D~lv~~~l~-eLf-~~~~~~-iaav~d~~~~~~~~~~p~~~~~~~~~~p~-~~~~ 174 (268)
.|+. .-++. +.|=+..+|+|+++.+++. |.+ -..++. +|...-- +-+.|.....+ ...|. ..-.
T Consensus 72 ~Rm~~i~~~~~~~~~evDyLf~~dvd~~F~~~vG~E~L~p~~~~~lva~lHp~-----~y~~~~~~fpY-ERrp~S~AyI 145 (246)
T 4ayl_A 72 KRFHIFLRIKEQLERETDYLFFFNANLLFTSPIGKEILPPSDSNGLLGTMHPG-----FYNKPNSEFTY-ERRDASTAYI 145 (246)
T ss_dssp THHHHHHTTHHHHHHHCSEEEEECTTEEECSCBCGGGSCCTTSCCEEEEBCGG-----GC--------------------
T ss_pred HHHHHHHHHHHHHHhhCCEEEEEeCCceeeccCCHHHcccCCCCCEEEEechh-----hhCCCcccCcc-cCCccccccc
Confidence 2322 22233 5789999999999999987 443 222222 3332211 11111000000 00000 0000
Q ss_pred CccCCCCCCCCccceEEEEecCH------HHHHHHHHHhhccCCCCCCChHHHHHHHc-cCcc-ccCCccccccc
Q 024367 175 PAELGPKPALYFNAGMFVFEPSL------STYHDLLETVQITTPTSFAEQDFLNMYFR-DIYR-PIPPIYNLVVA 241 (268)
Q Consensus 175 ~~~~g~~~~~yfNsGv~li~~~~------~~~~~l~~~~~~~~~~~~~DQd~LN~~~~-~~~~-~Lp~~yN~~~~ 241 (268)
|.. ...-|+-+|+.-=.+.. .-.+.+++-.++.-...++|..-||.+|- .+-. .||+.|++...
T Consensus 146 p~~---eGdfYY~ga~fGG~~~~vl~Lt~~c~~~i~~D~~n~I~A~whDESHLNKYfl~~KP~~vLSPEY~wd~~ 217 (246)
T 4ayl_A 146 PEG---EGRYYYAGGLSGGCTKAYLKLCTTICSWVDRDATNHIIPIWHDESLINKYFLDNPPAITLSPAYLYPEG 217 (246)
T ss_dssp --------CCCBCSSEEEEEHHHHHHHHHHHHHHHHHHHTTCSSCSCCHHHHHHHHHHHSCCSEEECGGGGEETT
T ss_pred cCC---CCCeEEeeeecCCcHHHHHHHHHHHHHHHHHHHhCCceEeccchhHhHHHHHhCCCCeeeCHHHcCCcc
Confidence 111 23578888887665554 11222333333333467899999999975 3334 59999986544
No 9
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=61.07 E-value=7.2 Score=36.15 Aligned_cols=101 Identities=13% Similarity=0.154 Sum_probs=50.2
Q ss_pred CCeEEEEEeecCcccHHHHHHHHHHHHhcCC-CC--CEEEEECCCCCHHH-HHHHHHc---CCEEEEecccCCCCchhhh
Q 024367 23 PKRAYVTFLAGDGDYWKGVVGLVKGLRKAKS-KY--PLLVAMLPDVPEEH-RKILIEQ---GCILREIEPVYPPENQTQF 95 (268)
Q Consensus 23 ~~~a~~t~l~~d~~Y~~~~~vl~~Sl~~~~~-~~--~ivvl~~~~i~~~~-~~~L~~~---~~~~~~v~~l~~~~~~~~~ 95 (268)
++...++ .+-|.. +..+.-++.||.+... .. .+ |+++++-++.. .+.|++. ...+ ..+..+++. .+
T Consensus 112 P~vSVII-p~yNe~-~~~L~~~L~Sll~qt~~~~~~EI-IVVDDgS~D~tl~~~l~~~~~~~~~v---~vi~~~~n~-G~ 184 (570)
T 2d7i_A 112 PNTSIII-PFHNEG-WSSLLRTVHSVLNRSPPELVAEI-VLVDDFSDREHLKKPLEDYMALFPSV---RILRTKKRE-GL 184 (570)
T ss_dssp CCEEEEE-EESSCC-HHHHHHHHHHHHHHSCGGGEEEE-EEEECSCCCGGGTHHHHHHHTTSTTE---EEEECSSCC-CH
T ss_pred CCeEEEE-EECCCC-HHHHHHHHHHHHhcCCccCcEEE-EEEECCCCcHHHHHHHHHHHHhCCeE---EEEECCCCC-CH
Confidence 3444433 444544 5667778899987654 22 33 35555544444 4444432 2221 122211111 11
Q ss_pred hhccccccchheeccccccccEEEEEecceecccC-cccccCC
Q 024367 96 AMAYYVINYSKLRIWEFVEYSKMIYLDGDIQVFDN-IDHLFDL 137 (268)
Q Consensus 96 ~~~~~~~~~~KL~i~~l~~~drvlYLD~D~lv~~~-l~eLf~~ 137 (268)
. -.|-...+....+-|++||+|+++..+ |..|.+.
T Consensus 185 ~-------~A~N~G~~~A~gd~i~fLD~D~~~~p~~L~~ll~~ 220 (570)
T 2d7i_A 185 I-------RTRMLGASVATGDVITFLDSHCEANVNWLPPLLDR 220 (570)
T ss_dssp H-------HHHHHHHHHCCSSEEEECCSSEEECTTCSHHHHHH
T ss_pred H-------HHHHHHHHhcCCCEEEEEcCCccccccHHHHHHHH
Confidence 1 112222222346789999999999654 5555553
No 10
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=58.51 E-value=7.5 Score=31.15 Aligned_cols=89 Identities=13% Similarity=0.107 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHhcC-CCCCEEEEECCCCCHHHHHHHHHc----CCEEEEecccCC---CCchhhhhhccccccchheecc
Q 024367 39 KGVVGLVKGLRKAK-SKYPLLVAMLPDVPEEHRKILIEQ----GCILREIEPVYP---PENQTQFAMAYYVINYSKLRIW 110 (268)
Q Consensus 39 ~~~~vl~~Sl~~~~-~~~~ivvl~~~~i~~~~~~~L~~~----~~~~~~v~~l~~---~~~~~~~~~~~~~~~~~KL~i~ 110 (268)
..+.-++.||.+.. ++..++ +++++-+++..+.+++. .++++..+.-.. ..+. ... ..+=...
T Consensus 14 ~~l~~~l~Sl~~q~~~~~eii-vvDd~S~d~t~~~~~~~~~~~~i~~i~~~~~~~~~~~~n~-G~~-------~a~N~gi 84 (255)
T 1qg8_A 14 DYVAKSISSILSQTFSDFELF-IMDDNSNEETLNVIRPFLNDNRVRFYQSDISGVKERTEKT-RYA-------ALINQAI 84 (255)
T ss_dssp TTHHHHHHHHHTCSCCCEEEE-EEECSCCHHHHHHHGGGGGSTTEEEEECCCCSHHHHHSSC-HHH-------HHHHHHH
T ss_pred HHHHHHHHHHHhccCCceEEE-EEECCCCchHHHHHHHHhhcCCEEEEeccccccccccccc-CHH-------HHHHHHH
Confidence 44556788887643 333343 56666677777777664 222222110000 0111 111 1121222
Q ss_pred ccccccEEEEEecceecccC-cccccC
Q 024367 111 EFVEYSKMIYLDGDIQVFDN-IDHLFD 136 (268)
Q Consensus 111 ~l~~~drvlYLD~D~lv~~~-l~eLf~ 136 (268)
+....+-|++||+|.++..+ |..+.+
T Consensus 85 ~~a~g~~i~~lD~Dd~~~~~~l~~~~~ 111 (255)
T 1qg8_A 85 EMAEGEYITYATDDNIYMPDRLLKMVR 111 (255)
T ss_dssp HHCCCSEEEEEETTEEECTTHHHHHHH
T ss_pred HHcCCCEEEEeCCCCccChHHHHHHHH
Confidence 23366889999999998655 444443
No 11
>1s4n_A Glycolipid 2-alpha-mannosyltransferase; alpha/beta fold, nucleotide-binding domain, rossmann fold; HET: NAG BMA MAN NDG; 2.01A {Saccharomyces cerevisiae} SCOP: c.68.1.16 PDB: 1s4o_A* 1s4p_A*
Probab=56.31 E-value=51 Score=28.49 Aligned_cols=204 Identities=16% Similarity=0.223 Sum_probs=104.8
Q ss_pred CCCCCCCeEEEEEeecCcccHHHHHHHHHHHHh-cCC--CCCEEEEECCCCCHHHHHHHHHc--C-CEEEEe--cccCCC
Q 024367 18 KAPSLPKRAYVTFLAGDGDYWKGVVGLVKGLRK-AKS--KYPLLVAMLPDVPEEHRKILIEQ--G-CILREI--EPVYPP 89 (268)
Q Consensus 18 ~~~~~~~~a~~t~l~~d~~Y~~~~~vl~~Sl~~-~~~--~~~ivvl~~~~i~~~~~~~L~~~--~-~~~~~v--~~l~~~ 89 (268)
....+.+-++|+ |+.|. =+.+++-+++||.. .|. +||.|+|-+...+++.++.+++. | +....| +....|
T Consensus 22 ~~~~r~nAtfV~-L~RN~-el~~~l~Si~~vE~rFN~~y~YpwvFlNd~pFteeFk~~~~~~~sg~v~Fg~Ip~e~W~~P 99 (348)
T 1s4n_A 22 NKAGKPKACYVT-LVRNK-ELKGLLSSIKYVENKINKKFPYPWVFLNDEPFTEEFKEAVTKAVSSEVKFGILPKEHWSYP 99 (348)
T ss_dssp -CCSCCCEEEEE-ECCGG-GHHHHHHHHHHHHHHTTTTSCCCEEEEESSCCCHHHHHHHHHHCSSCEEEEECCGGGSSCC
T ss_pred CCCCCCceEEEE-EeccH-HHHHHHHHHHHHHHHhhccCCCCEEEecCCCCCHHHHHHHHHhcCcceEEEEcCHHHcCCC
Confidence 334566777777 55664 48888888888864 344 58888887778999998888764 2 222222 222233
Q ss_pred Cchh--hhh------h---cc-ccccc---hhe---e---ccccccccEEEEEecceecccCcc-cccCC--C-CCcee-
Q 024367 90 ENQT--QFA------M---AY-YVINY---SKL---R---IWEFVEYSKMIYLDGDIQVFDNID-HLFDL--P-DGYFY- 143 (268)
Q Consensus 90 ~~~~--~~~------~---~~-~~~~~---~KL---~---i~~l~~~drvlYLD~D~lv~~~l~-eLf~~--~-~~~ia- 143 (268)
+..+ ... . .+ ....| -|+ + -+.|.+|+=.-=+++|+-+.-||+ ++|.. + ++..|
T Consensus 100 ~~Id~~~a~~~~~~~~~~i~Yg~s~sYr~MCRf~SG~F~~h~~l~~YdyYWRvEPdv~~~CDi~YDpF~~M~~nnK~YGF 179 (348)
T 1s4n_A 100 EWINQTKAAEIRADAATKYIYGGSESYRHMCRYQSGFFWRHELLEEYDWYWRVEPDIKLYCDINYDVFKWMQENEKVYGF 179 (348)
T ss_dssp TTSCHHHHHHHHHHHTTTSTTTTCHHHHHHHHHHHHTGGGSGGGTTCSEEEECCTTCEECSCCCSCHHHHHHHTTCCEEE
T ss_pred CCcCHHHHHHHHHHHhcCCccCCCcchhhhhhhhhhhhccCcccccCceEEEeCCCceeecCCCCCccHHhHhcCceEEE
Confidence 2211 000 0 00 00011 121 1 244568998888999999999998 77764 2 22222
Q ss_pred --eeecccccCCCCCCCcccccccccCCCCC------CCCcc-CCC-CCCCCccceEEEEecCHH---HHHHHHHHhhcc
Q 024367 144 --AVMDCFCEKTWSHTPQFKIGYCQQCPDKV------KWPAE-LGP-KPALYFNAGMFVFEPSLS---TYHDLLETVQIT 210 (268)
Q Consensus 144 --av~d~~~~~~~~~~p~~~~~~~~~~p~~~------~~~~~-~g~-~~~~yfNsGv~li~~~~~---~~~~l~~~~~~~ 210 (268)
+..+... +.+.......+....+|+.+ .|... .|. -+.+.|=|-+-+-+++-+ .++++++.+.+.
T Consensus 180 ~is~~E~~~--tiptLw~~~~~F~~~~p~~~~~~n~~~flsdd~g~~Yn~ChFwSNFEIa~l~ffRs~~Y~~~F~~LD~~ 257 (348)
T 1s4n_A 180 TVSIHEYEV--TIPTLWQTSMDFIKKNPEYLDENNLMSFLSNDNGKTYNLCHFWSNFEIANLNLWRSPAYREYFDTLDHQ 257 (348)
T ss_dssp SCEEECCGG--GCTTHHHHHHHHHHHCGGGSCTTCCHHHHCSSTTSSCCCEEECTTSEEEEHHHHTSHHHHHHHHHHHHH
T ss_pred EeeccchHH--HHHHHHHHHHHHHHhCccccCCcchhhceecCCCCccceecccchhhhhhhHHhcCHHHHHHHHHHhcc
Confidence 2222110 01000000111111122111 11000 010 133567778888888875 466777777553
Q ss_pred C---CCCCCChHHHHHHH
Q 024367 211 T---PTSFAEQDFLNMYF 225 (268)
Q Consensus 211 ~---~~~~~DQd~LN~~~ 225 (268)
. .-+++|-.+-.+..
T Consensus 258 GGFyyERWGDAPVHSiA~ 275 (348)
T 1s4n_A 258 GGFFYERWGDAPVHSIAA 275 (348)
T ss_dssp THHHHSCCCHHHHHHHHH
T ss_pred CCEeeccCCcchHHHHHH
Confidence 2 13678877666543
No 12
>2p6w_A VP54, putative glycosyltransferase (mannosyltransferase in glycosylating the PBCV-1 major...; HET: FLC; 1.60A {Paramecium bursaria chlorella virus 1} PDB: 2p72_A* 2p73_A*
Probab=55.82 E-value=33 Score=27.10 Aligned_cols=18 Identities=28% Similarity=0.471 Sum_probs=15.4
Q ss_pred ccccccEEEEEecceecc
Q 024367 111 EFVEYSKMIYLDGDIQVF 128 (268)
Q Consensus 111 ~l~~~drvlYLD~D~lv~ 128 (268)
..++-+-+-|||+|.+|.
T Consensus 69 khPeAEWfWWLDsDAlIM 86 (213)
T 2p6w_A 69 KFPSTEWFLWLDSDVYVN 86 (213)
T ss_dssp HCTTCSEEEEECTTEEEC
T ss_pred HCCCceEEEEecCCceee
Confidence 345788999999999998
No 13
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=51.24 E-value=14 Score=32.98 Aligned_cols=25 Identities=12% Similarity=0.227 Sum_probs=18.2
Q ss_pred ccccEEEEEecceecccC-cccccCC
Q 024367 113 VEYSKMIYLDGDIQVFDN-IDHLFDL 137 (268)
Q Consensus 113 ~~~drvlYLD~D~lv~~~-l~eLf~~ 137 (268)
...+-|++||+|+++..+ |..|.+.
T Consensus 113 A~gd~i~flD~D~~~~p~~L~~ll~~ 138 (472)
T 1xhb_A 113 SRGQVITFLDAHCECTAGWLEPLLAR 138 (472)
T ss_dssp CCSSEEEEEESSEEECTTCHHHHHHH
T ss_pred ccCCeEEEECCCeEeCccHHHHHHHH
Confidence 346789999999998654 5555553
No 14
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=48.59 E-value=9.8 Score=30.06 Aligned_cols=23 Identities=13% Similarity=0.153 Sum_probs=16.9
Q ss_pred cccEEEEEecceecccC-cccccC
Q 024367 114 EYSKMIYLDGDIQVFDN-IDHLFD 136 (268)
Q Consensus 114 ~~drvlYLD~D~lv~~~-l~eLf~ 136 (268)
..+-|++||+|.++..+ |..|.+
T Consensus 84 ~g~~i~~lD~Dd~~~~~~l~~l~~ 107 (240)
T 3bcv_A 84 TGEYVAFCDSDDYVDSDMYMTMYN 107 (240)
T ss_dssp CSSEEEECCTTCCCCTTHHHHHHH
T ss_pred CCCEEEEECCCCcCCHHHHHHHHH
Confidence 55789999999998655 445544
No 15
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=46.71 E-value=29 Score=29.29 Aligned_cols=105 Identities=10% Similarity=0.066 Sum_probs=55.9
Q ss_pred CCCCCeEEEEEeecCcccHHHHHHHHHHHHhcC-C-CCCEEEEECCCCCHHHHHHHHHcCCEEEE-ecccC-CCCchhhh
Q 024367 20 PSLPKRAYVTFLAGDGDYWKGVVGLVKGLRKAK-S-KYPLLVAMLPDVPEEHRKILIEQGCILRE-IEPVY-PPENQTQF 95 (268)
Q Consensus 20 ~~~~~~a~~t~l~~d~~Y~~~~~vl~~Sl~~~~-~-~~~ivvl~~~~i~~~~~~~L~~~~~~~~~-v~~l~-~~~~~~~~ 95 (268)
...++...++ .+.|.. ..+.-++.||.... + ...++ +++++-++...+.+++.+..+.. +..+. ...+. ..
T Consensus 45 ~~~~~vSViI-p~yN~~--~~l~~~l~sl~~q~~~~~~eii-vVDdgS~D~t~~~~~~~~~~~~~~~~~~~~~~~n~-G~ 119 (329)
T 3ckj_A 45 KAGRTISVVL-PALDEE--DTIGSVIDSISPLVDGLVDELI-VLDSGSTDDTEIRAVAAGARVVSREQALPEVPIRP-GK 119 (329)
T ss_dssp TTTCCEEEEE-EESSCT--TTHHHHHHHHGGGBTTTBSEEE-EEECSCCSSHHHHHHHTTCEEEEHHHHCTTSCCCC-SH
T ss_pred ccCCcEEEEE-eeCCCH--HHHHHHHHHHHHhhCCCCcEEE-EEeCCCCchHHHHHHHhhhhhccceeeeccCCCCC-CH
Confidence 3344554444 444532 34566788887754 3 24454 56666666677778887766432 33331 11111 11
Q ss_pred hhccccccchheeccccccccEEEEEeccee-cccC-cccccC
Q 024367 96 AMAYYVINYSKLRIWEFVEYSKMIYLDGDIQ-VFDN-IDHLFD 136 (268)
Q Consensus 96 ~~~~~~~~~~KL~i~~l~~~drvlYLD~D~l-v~~~-l~eLf~ 136 (268)
. ..+-...+....+-|++||+|.+ +..+ |..+.+
T Consensus 120 ~-------~a~n~g~~~a~gd~i~~lD~D~~~~~p~~l~~l~~ 155 (329)
T 3ckj_A 120 G-------EALWRSLAASRGDIVVFVDSDLINPHPMFVPWLVG 155 (329)
T ss_dssp H-------HHHHHHHHHCCCSEEEECCTTEESCCTTHHHHHHH
T ss_pred H-------HHHHHHHHhCCCCEEEEECCCCCCcChHHHHHHHH
Confidence 1 11111112235688999999999 6543 666554
No 16
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=45.91 E-value=89 Score=28.73 Aligned_cols=100 Identities=13% Similarity=0.043 Sum_probs=49.4
Q ss_pred CeEEEEEeecCcccHHHHHHHHHHHHhcCCCCCE-EEEECCCCCHHHHHHHHHcC--CEEEEecccCCCCchhhhhhccc
Q 024367 24 KRAYVTFLAGDGDYWKGVVGLVKGLRKAKSKYPL-LVAMLPDVPEEHRKILIEQG--CILREIEPVYPPENQTQFAMAYY 100 (268)
Q Consensus 24 ~~a~~t~l~~d~~Y~~~~~vl~~Sl~~~~~~~~i-vvl~~~~i~~~~~~~L~~~~--~~~~~v~~l~~~~~~~~~~~~~~ 100 (268)
+...++ .+-|. ...+..++.||.......++ +++++++-+++..+.+++.. ..+.-+.. . .... ...
T Consensus 94 ~vsviI-p~~n~--~~~l~~~l~sl~~q~~~~~~eiivvDd~s~d~t~~~~~~~~~~~~i~~i~~-~-~~~~-g~~---- 163 (625)
T 2z86_A 94 GLSIVI-PTYNR--AKILAITLACLCNQKTIYDYEVIVADDGSKENIEEIVREFESLLNIKYVRQ-K-DYGY-QLC---- 163 (625)
T ss_dssp CEEEEE-EESSC--HHHHHHHHHHHHTCCCSSCEEEEEEEESCSSCHHHHHHTTTTTSCEEEEEE-C-CCSC-CHH----
T ss_pred cEEEEE-ecCCc--HHHHHHHHHHHHhhccCCCeEEEEEeCCCchhHHHHHHHhhhcCCeEEEEe-C-CCCc-chh----
Confidence 444433 34444 46677788999876432233 33555555555566666542 11111111 1 0000 011
Q ss_pred cccchheeccccccccEEEEEecceecccC-cccccC
Q 024367 101 VINYSKLRIWEFVEYSKMIYLDGDIQVFDN-IDHLFD 136 (268)
Q Consensus 101 ~~~~~KL~i~~l~~~drvlYLD~D~lv~~~-l~eLf~ 136 (268)
..+-...+....+-|+++|+|.++..+ |..+..
T Consensus 164 ---~a~N~g~~~a~g~~v~~lD~D~~~~~~~l~~~~~ 197 (625)
T 2z86_A 164 ---AVRNLGLRAAKYNYVAILDCDMAPNPLWVQSYME 197 (625)
T ss_dssp ---HHHHHHHHHCCSSEEEEECTTEEECTTHHHHHHH
T ss_pred ---HHHHHHHHhCCcCEEEEECCCCCCCHHHHHHHHH
Confidence 111112222367889999999999654 444443
No 17
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=42.57 E-value=98 Score=26.94 Aligned_cols=99 Identities=11% Similarity=0.099 Sum_probs=48.9
Q ss_pred EEeecCc-ccHHHHHHHHHHHH-hcCCCCCEEEEECCCCCHHHHHHHHHcCCEEEEec--ccCCCCchhhhhhccccccc
Q 024367 29 TFLAGDG-DYWKGVVGLVKGLR-KAKSKYPLLVAMLPDVPEEHRKILIEQGCILREIE--PVYPPENQTQFAMAYYVINY 104 (268)
Q Consensus 29 t~l~~d~-~Y~~~~~vl~~Sl~-~~~~~~~ivvl~~~~i~~~~~~~L~~~~~~~~~v~--~l~~~~~~~~~~~~~~~~~~ 104 (268)
++-+.|. .++..+.-.+.++. .......++ +++|+=++...+.+++.+..++... .+..+.+. ... .
T Consensus 99 VIP~yNe~~~l~~~l~sl~~~l~~~~~~~EII-VVDDgStD~T~~i~~~~~~~v~~~~~~~i~~~~n~-G~g-------~ 169 (387)
T 3f1y_A 99 VLPSRNVADTVGGIIDEIHALNERAPLIDQIL-VVDADSEDGTAGVAASHGAEVYSENELMSGYGDAH-GKG-------D 169 (387)
T ss_dssp EEEESSCTTTHHHHHHHHHHHHHHSCCCSEEE-EEECSCSSSHHHHHHHTTCEEEEGGGTTGGGCSCC-SHH-------H
T ss_pred EEEcCCCHHHHHHHHHHHHHHHhcCCCCeEEE-EEcCcCCccHHHHHHHhCchhcccceeEecCCccC-CHH-------H
Confidence 3344554 45554444443322 223345554 5666666677777888777654321 11111111 010 1
Q ss_pred hheeccccccccEEEEEeccee-cc-cCcccccC
Q 024367 105 SKLRIWEFVEYSKMIYLDGDIQ-VF-DNIDHLFD 136 (268)
Q Consensus 105 ~KL~i~~l~~~drvlYLD~D~l-v~-~~l~eLf~ 136 (268)
.+-...+....+-|+++|+|.. +. +.|..|.+
T Consensus 170 A~n~G~~~A~gd~i~~lDaD~~~~~p~~L~~l~~ 203 (387)
T 3f1y_A 170 AMWRALSVTRGDLVLYIDADTRDFRPQLAYGVLG 203 (387)
T ss_dssp HHHHHTTTCCSSEEEECCTTCSSCCTHHHHTTHH
T ss_pred HHHHHHHhcCCCEEEEEcCCCCcCCHHHHHHHHH
Confidence 1112222336788999999998 43 33555543
No 18
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=30.62 E-value=1.3e+02 Score=21.22 Aligned_cols=75 Identities=16% Similarity=0.163 Sum_probs=38.3
Q ss_pred CCCcccccccccccccCCCCCCCeEEEEEeecCcccHHHHHHHHHHHHhcCCC--CCEEEEECCCCCHHHHHHHHHcCC
Q 024367 2 APDITPTTITKTTSLSKAPSLPKRAYVTFLAGDGDYWKGVVGLVKGLRKAKSK--YPLLVAMLPDVPEEHRKILIEQGC 78 (268)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~a~~t~l~~d~~Y~~~~~vl~~Sl~~~~~~--~~ivvl~~~~i~~~~~~~L~~~~~ 78 (268)
+|+++-++..+++++++. ..+.+.+.+.++.-.++....-.+..+.+..++ ..++.+-.+.-.++..+.+++.+.
T Consensus 9 ~P~f~l~~~g~~~~l~~~--~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~ 85 (152)
T 3gl3_A 9 APDFALPGKTGVVKLSDK--TGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKTGDAMKFLAQVPA 85 (152)
T ss_dssp CCCCEEEBSSSEEEGGGG--TTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSHHHHHHHHHHSCC
T ss_pred CCceEeeCCCCeEeHHHh--CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCHHHHHHHHHHcCC
Confidence 688877775567777775 345555555543333444433344444432222 344433333334445556666654
No 19
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=25.11 E-value=1.2e+02 Score=26.98 Aligned_cols=25 Identities=12% Similarity=0.363 Sum_probs=18.1
Q ss_pred ccccEEEEEecceecccC-cccccCC
Q 024367 113 VEYSKMIYLDGDIQVFDN-IDHLFDL 137 (268)
Q Consensus 113 ~~~drvlYLD~D~lv~~~-l~eLf~~ 137 (268)
...|-|++||+|+.+..+ |.+|.+.
T Consensus 145 A~gd~i~flD~D~~~~p~~L~~ll~~ 170 (501)
T 2ffu_A 145 AQAKVLTFLDSHCECNEHWLEPLLER 170 (501)
T ss_dssp CCSSEEEECCSSEEECTTCHHHHHHH
T ss_pred cCCCEEEEECCCcccCccHHHHHHHH
Confidence 356789999999998654 5555543
No 20
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=24.44 E-value=1.9e+02 Score=20.37 Aligned_cols=79 Identities=15% Similarity=0.051 Sum_probs=42.2
Q ss_pred CCCcccccccc-cccccCCCCCCCeEEEEEeecCccc--HHHHHHHHHHHHhc--C-CCCCEEEEECCCCCHHHHHHHHH
Q 024367 2 APDITPTTITK-TTSLSKAPSLPKRAYVTFLAGDGDY--WKGVVGLVKGLRKA--K-SKYPLLVAMLPDVPEEHRKILIE 75 (268)
Q Consensus 2 ~~~~~~~~~~~-~~~~~~~~~~~~~a~~t~l~~d~~Y--~~~~~vl~~Sl~~~--~-~~~~ivvl~~~~i~~~~~~~L~~ 75 (268)
+|+++-++..| +++++...-+.+...+.+.++.-.. +....-.+..+.+. . .+..++.+-.++-.++.++.+++
T Consensus 11 ~p~f~l~~~~g~~~~l~~~~~~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~ 90 (150)
T 3fw2_A 11 APFFSLPNAKGEKITRSSDAFKQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDKQQWKDAIKR 90 (150)
T ss_dssp CCCCCEEBTTCCEECTTSTTTTTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCHHHHHHHHHH
T ss_pred CCccEeECCCCCEEecchhhhCCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCHHHHHHHHHH
Confidence 68887766655 4566622335566666666544445 44444445555432 2 22344434344444556667777
Q ss_pred cCCEE
Q 024367 76 QGCIL 80 (268)
Q Consensus 76 ~~~~~ 80 (268)
.+...
T Consensus 91 ~~~~~ 95 (150)
T 3fw2_A 91 DTLDW 95 (150)
T ss_dssp TTCCS
T ss_pred hCCCc
Confidence 66543
Done!