Query 024368
Match_columns 268
No_of_seqs 117 out of 793
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 07:02:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024368.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024368hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lac_A Pyrrolidone-carboxylate 100.0 1E-51 3.5E-56 364.6 19.5 189 43-251 2-202 (215)
2 3ro0_A Pyrrolidone-carboxylate 100.0 8.5E-52 2.9E-56 366.7 17.8 191 43-253 3-204 (223)
3 3giu_A Pyrrolidone-carboxylate 100.0 2.7E-52 9.3E-57 368.2 14.3 189 42-251 3-203 (215)
4 4hps_A Pyrrolidone-carboxylate 100.0 8.7E-52 3E-56 367.6 17.7 191 42-252 23-225 (228)
5 4gxh_A Pyrrolidone-carboxylate 100.0 3.1E-51 1.1E-55 361.7 18.1 189 43-251 3-203 (216)
6 1a2z_A Pyrrolidone carboxyl pe 100.0 4.8E-51 1.6E-55 361.4 19.2 189 44-252 3-208 (220)
7 1iu8_A Pyrrolidone-carboxylate 100.0 3.3E-51 1.1E-55 359.3 17.2 185 44-251 2-198 (206)
8 1x10_A Pyrrolidone-carboxylate 100.0 1.2E-50 4.2E-55 356.2 19.2 189 44-252 2-206 (208)
9 2ebj_A Pyrrolidone carboxyl pe 100.0 2.1E-51 7.3E-56 357.0 12.9 182 44-248 1-191 (192)
10 2pbq_A Molybdenum cofactor bio 37.6 66 0.0023 26.1 6.1 81 42-138 7-88 (178)
11 3aqe_A Receptor activity-modif 29.8 25 0.00086 26.3 1.9 20 241-260 47-66 (91)
12 4fc5_A TON_0340, putative unch 25.9 3.4E+02 0.012 23.9 9.0 26 44-69 44-74 (270)
13 3ej9_B Beta-subunit of trans-3 23.8 43 0.0015 23.8 2.1 32 225-256 3-34 (70)
14 4b8w_A GDP-L-fucose synthase; 23.8 1.8E+02 0.0063 24.0 6.8 12 118-129 60-71 (319)
15 4b4o_A Epimerase family protei 22.7 1.4E+02 0.0049 25.1 5.9 11 118-128 50-60 (298)
No 1
>3lac_A Pyrrolidone-carboxylate peptidase; alpha beta class, three layer sandwich, hydrolase, protease, thiol protease, structural genomics; 2.00A {Bacillus anthracis}
Probab=100.00 E-value=1e-51 Score=364.58 Aligned_cols=189 Identities=24% Similarity=0.383 Sum_probs=161.4
Q ss_pred eEEEEEcccCCCCCCCCchHHHHHHHHHHHHhcCCCCceeeceeeeeecccCCcchhHHHHHHHHhccccccccCCCccE
Q 024368 43 VTIHVTGFKKFHGVSENPTETIVSNLREYMKKKGMPKGLILGSCNILETAGHGAVAPLYQTLQSAINEKDSESANSRRII 122 (268)
Q Consensus 43 ~~VLVTGFgPF~~~~~NPS~~iv~~L~~~~~~~g~~~~~~i~~~~vlpvs~~~~~~~~y~~v~~~v~~~~~~~~~~~pdl 122 (268)
.+|||||||||+++++||||+++++|++. +...++|. ...+||+|..+...+.+.++ .++||+
T Consensus 2 ~~VLvTGF~PF~~~~~NPS~~~v~~L~~~-----i~~~~~i~-~~~lPv~y~~~~~~l~~~~~-----------~~~Pd~ 64 (215)
T 3lac_A 2 KTVLLTGFDPFGGESINPAWEVAKSLHEK-----TIGEYKII-SKQVPTVFHKSISVLKEYIE-----------ELAPEF 64 (215)
T ss_dssp EEEEEEEECCCTTCSCCHHHHHHHTTTTC-----EETTEEEE-EEEECSSTTHHHHHHHHHHH-----------HHCCSE
T ss_pred CEEEEEecCCCCCCCCChHHHHHHHhccc-----cCCCcEEE-EEEEeeEhHHHHHHHHHHHH-----------hhCCCe
Confidence 48999999999999999999999999862 22233553 45689988766544433333 369999
Q ss_pred EEEeeecCCCceeeeeEeeecCCCCCCCCCCCCCCCCccccCCCCCcCcccccCCcHHHHHHHHHhCCCceEEeCCCCcc
Q 024368 123 WVHFGVNSGATRFAIEQQAVNEATFRCPDEMGWKPQKVPIFPADGEISRVRETSIPVEEITRTLAKKGYEVITSDDAGRF 202 (268)
Q Consensus 123 vIHlGva~~~~~i~lE~~A~N~~~~~~pD~~G~~p~~~~I~~~~gp~~~~l~T~Lpv~~l~~~l~~~gi~v~vS~dAG~Y 202 (268)
|||+|++++|+.|++||+|+|..+|++|||+|++|.+++|.+ +||. .++|+||+++|++++++.|+|+++|+|||+|
T Consensus 65 VihvG~aggr~~i~lEr~A~N~~d~~~pDn~G~~P~~~~i~~-~Gp~--~~~s~Lpv~~~v~~l~~~gipa~vS~dAG~y 141 (215)
T 3lac_A 65 IICIGQAGGRPDITIERVAINIDDARIADNEGNQPVDVPVVE-EGPA--AYWSTLPMKAIVKKLQEEGIPASVSQTAGTF 141 (215)
T ss_dssp EEEEEECTTCSSEEEECEEESCBCCSSCCTTSCCCSSBCSST-TSCS--EEECCSCHHHHHHHHHHTTCCEEEESCCCSS
T ss_pred EEEeccCCCCceEEEEEEEeccCCCcCCCcCCCCCCCCcCcC-CCCc--eeecCCCHHHHHHHHHhCCCcEEEcCCCCcc
Confidence 999999999999999999999889999999999999999987 6775 4679999999999999999999999999999
Q ss_pred cchHHHHHHHHhhhhc--CCceEEEecCCCC----------CCChHHHHHHHHHHHHHHHh
Q 024368 203 VCNYVYYHSLRFAEQN--GTKSLFVHVPLFL----------TIDEETQMQFAASLLEFASQ 251 (268)
Q Consensus 203 LCNyiyY~sL~~~~~~--~~~~~FVHVP~~~----------~~~~e~~~~~v~~lI~~la~ 251 (268)
||||+||+||++.+++ +.+++|||||+++ .++.|++.+.+..+|+++++
T Consensus 142 vCN~i~Y~sL~~~~~~~~~~~~gFIHVP~~~~q~~~~~~~p~m~~~~~~~al~~~i~~~~~ 202 (215)
T 3lac_A 142 VCNHLFYGLMHELEKHDTKMKGGFIHIPFLPEQASNYPGQPSMSLSTIRKGIELAVEVTTT 202 (215)
T ss_dssp HHHHHHHHHHHHHGGGTTSSEEEEEEECCCHHHHTTSTTCCCCCHHHHHHHHHHHHHHHTT
T ss_pred ccHHHHHHHHHHHHhcCCCceEEEEEeCCChHHhccCCCCCCCCHHHHHHHHHHHHHHHHh
Confidence 9999999999998643 5789999999985 35677888888888998877
No 2
>3ro0_A Pyrrolidone-carboxylate peptidase; hydrolase-hydrolase inhibitor complex; HET: TPT; 1.50A {Bacillus amyloliquefaciens} SCOP: c.56.4.1 PDB: 3rnz_A* 1aug_A
Probab=100.00 E-value=8.5e-52 Score=366.70 Aligned_cols=191 Identities=22% Similarity=0.302 Sum_probs=162.8
Q ss_pred eEEEEEcccCCCCCCCCchHHHHHHHHHHHHhcCCCCceeeceeeeeecccCCcchhHHHHHHHHhccccccccCCCccE
Q 024368 43 VTIHVTGFKKFHGVSENPTETIVSNLREYMKKKGMPKGLILGSCNILETAGHGAVAPLYQTLQSAINEKDSESANSRRII 122 (268)
Q Consensus 43 ~~VLVTGFgPF~~~~~NPS~~iv~~L~~~~~~~g~~~~~~i~~~~vlpvs~~~~~~~~y~~v~~~v~~~~~~~~~~~pdl 122 (268)
.+|||||||||+++++||||+++++|++.+ ++.++|. ...+||+|..+...+.+.++ ..+||+
T Consensus 3 ~~VLvTGF~PF~~~~~NPS~~~v~~L~~~i-----~~~~~i~-~~~lPv~y~~~~~~l~~~i~-----------~~~Pd~ 65 (223)
T 3ro0_A 3 KKVLLTGFDPFGGETVNPSWEAVKRLNGAA-----EGPASIV-SEQVPTVFYKSLAVLREAMK-----------KHQPDI 65 (223)
T ss_dssp EEEEEEEECCCTTCSCCHHHHHHHHTTTCE-----ETTEEEE-EEEECSCTTHHHHHHHHHHH-----------HHCCSE
T ss_pred CEEEEEeCCCCCCCCCChHHHHHHHhcccc-----CCCcEEE-EEEeeeEehhHHHHHHHHHH-----------HhCCCE
Confidence 489999999999999999999999998742 1233553 45689988766544444333 368999
Q ss_pred EEEeeecCCCceeeeeEeeecCCCCCCCCCCCCCCCCccccCCCCCcCcccccCCcHHHHHHHHHhCCCceEEeCCCCcc
Q 024368 123 WVHFGVNSGATRFAIEQQAVNEATFRCPDEMGWKPQKVPIFPADGEISRVRETSIPVEEITRTLAKKGYEVITSDDAGRF 202 (268)
Q Consensus 123 vIHlGva~~~~~i~lE~~A~N~~~~~~pD~~G~~p~~~~I~~~~gp~~~~l~T~Lpv~~l~~~l~~~gi~v~vS~dAG~Y 202 (268)
|||+|++++|+.|++||+|+|..+|++|||+|++|.+++|.+ +||. .++|+||+++|+++++++|+|+++|+|||+|
T Consensus 66 VihvG~aggr~~i~lEr~A~N~~d~ripDn~G~~P~d~~i~~-~Gp~--a~~stLpv~~~v~~l~~~gipa~vS~dAG~y 142 (223)
T 3ro0_A 66 IICVGQAGGRMQITPERVAINLNEARIPDNEGNQPVGEDISQ-GGPA--AYWTGLPIKRIVEEIKKEGIPAAVSYTAGTF 142 (223)
T ss_dssp EEEEEECTTCCSBEEBSEEESCBCCSSCCTTSCCCCSBCSST-TSCS--EEECCSCHHHHHHHHHHTTCCBCCBSCCCSS
T ss_pred EEEeccCCCCceEEEEEEEecCCCCCCCCCCCCCCCCCCCcC-CCCc--eeecCCCHHHHHHHHHHCCCCEEEeCCCCcc
Confidence 999999999999999999999989999999999999999987 6775 4679999999999999999999999999999
Q ss_pred cchHHHHHHHHhhhh--cCCceEEEecCCCC---------CCChHHHHHHHHHHHHHHHhCC
Q 024368 203 VCNYVYYHSLRFAEQ--NGTKSLFVHVPLFL---------TIDEETQMQFAASLLEFASQWP 253 (268)
Q Consensus 203 LCNyiyY~sL~~~~~--~~~~~~FVHVP~~~---------~~~~e~~~~~v~~lI~~la~~~ 253 (268)
||||+||+||++.++ .+++++|||||+++ .++.+++.+.+...|+++++..
T Consensus 143 vCN~iyY~sL~~~~~~~~~~~~gFIHVP~l~eq~~~~~~psm~~~~~~~al~~~i~~~~~~~ 204 (223)
T 3ro0_A 143 VCNHLFYGLMDEISRHHPHIRGGFIHIPYIPEQTLQKSAPSLSLDHITKALKIAAVTAAAHE 204 (223)
T ss_dssp HHHHHHHHHHHHHHHHCTTCEEEEEEECBCGGGCSSSCCCBCCHHHHHHHHHHHHHHHHHCS
T ss_pred cchHHHHHHHHHHHhcCCCceEEEEEeCCChHHhccCCCCCCCHHHHHHHHHHHHHHHHhhC
Confidence 999999999999754 36789999999984 3567788888888899888754
No 3
>3giu_A Pyrrolidone-carboxylate peptidase; IDP00836, hydrolase, PROT thiol protease, structural genomics; HET: MSE PG4; 1.25A {Staphylococcus aureus subsp} SCOP: c.56.4.0
Probab=100.00 E-value=2.7e-52 Score=368.24 Aligned_cols=189 Identities=25% Similarity=0.342 Sum_probs=158.5
Q ss_pred ceEEEEEcccCCCCCCCCchHHHHHHHHHHHHhcCCCCceeeceeeeeecccCCcchhHHHHHHHHhccccccccCCCcc
Q 024368 42 AVTIHVTGFKKFHGVSENPTETIVSNLREYMKKKGMPKGLILGSCNILETAGHGAVAPLYQTLQSAINEKDSESANSRRI 121 (268)
Q Consensus 42 ~~~VLVTGFgPF~~~~~NPS~~iv~~L~~~~~~~g~~~~~~i~~~~vlpvs~~~~~~~~y~~v~~~v~~~~~~~~~~~pd 121 (268)
+++|||||||||++++.||||+++++|++.+ .+++|. ...+||+|..+...+.+.++ .++||
T Consensus 3 ~m~VLvTGF~PF~~~~~NPS~~~v~~L~~~i------~~~~i~-~~~lPv~~~~~~~~l~~~i~-----------~~~Pd 64 (215)
T 3giu_A 3 AMHILVTGFAPFDNQNINPSWEAVTQLEDII------GTHTID-KLKLPTSFKKVDNIINKTLA-----------SNHYD 64 (215)
T ss_dssp -CEEEEEEECCCTTCSCCHHHHHHHHSCSEE------TTEEEE-EEEECSCHHHHHHHHHHHHH-----------HSCCS
T ss_pred CcEEEEEecCCCCCCCCChHHHHHHHhcccc------CCcEEE-EEEeceehHhHHHHHHHHHH-----------HhCCC
Confidence 4599999999999999999999999998632 345553 34688877554433333222 37999
Q ss_pred EEEEeeecCCCceeeeeEeeecCCCCCCCCCCCCCCCCccccCCCCCcCcccccCCcHHHHHHHHHhCCCceEEeCCCCc
Q 024368 122 IWVHFGVNSGATRFAIEQQAVNEATFRCPDEMGWKPQKVPIFPADGEISRVRETSIPVEEITRTLAKKGYEVITSDDAGR 201 (268)
Q Consensus 122 lvIHlGva~~~~~i~lE~~A~N~~~~~~pD~~G~~p~~~~I~~~~gp~~~~l~T~Lpv~~l~~~l~~~gi~v~vS~dAG~ 201 (268)
+|||+|++++|+.|++||+|+|..+|++|||+|++|.+++|.+ +||. .++|+||+++|++++++.|+|+++|+|||+
T Consensus 65 ~Vi~vG~a~gr~~i~lEr~A~N~~~~~~pDn~G~~p~~~~i~~-~gp~--~~~stLpv~~iv~~l~~~gipa~vS~dAG~ 141 (215)
T 3giu_A 65 VVLAIGQAGGRNAITPERVAINIDDARIPDNDDFQPIDQAIHL-DGAP--AYFSNLPVKAMTQSIINQGLPGALSNSAGT 141 (215)
T ss_dssp EEEEEEECTTCCSBEEBCEEESCEECSSCCTTSCCCEEECSCT-TSCS--EEECCSCHHHHHHHHHHTTCCBCCBSCCCS
T ss_pred EEEEeccCCCCceEEEEEEEeccCCCCCCCCCCCCCCCCcccC-CCcc--ccccCCCHHHHHHHHHHcCCCEEEeCCCCc
Confidence 9999999999999999999999988999999999999999987 6775 467999999999999999999999999999
Q ss_pred ccchHHHHHHHHhhhhc--CCceEEEecCCCCC----------CChHHHHHHHHHHHHHHHh
Q 024368 202 FVCNYVYYHSLRFAEQN--GTKSLFVHVPLFLT----------IDEETQMQFAASLLEFASQ 251 (268)
Q Consensus 202 YLCNyiyY~sL~~~~~~--~~~~~FVHVP~~~~----------~~~e~~~~~v~~lI~~la~ 251 (268)
|||||+||+||++.+++ +++++|||||++++ ++.|++.+.+..+|+++++
T Consensus 142 yvCN~i~Y~sL~~~~~~~~~~~~gFIHVP~~~eq~~~~~~~psm~~~~~~~al~~~i~~~~~ 203 (215)
T 3giu_A 142 FVCNHTLYHLGYLQDKHYPHLRFGFIHVPYIPEQVIGKPDTPSMPLEKIVAGLTAAIEAISN 203 (215)
T ss_dssp SHHHHHHHHHHHHHHHTCTTCEEEEEEECCCGGGGTTCTTCCCCCHHHHHHHHHHHHHTCCS
T ss_pred cccHHHHHHHHHHHHhcCCCceEEEEEeCCCHHHhccCCCCCCCCHHHHHHHHHHHHHHHhh
Confidence 99999999999998643 57899999999943 5667777778878877665
No 4
>4hps_A Pyrrolidone-carboxylate peptidase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, hydrolase; 1.55A {Xenorhabdus bovienii} PDB: 4gxh_A
Probab=100.00 E-value=8.7e-52 Score=367.60 Aligned_cols=191 Identities=25% Similarity=0.361 Sum_probs=162.9
Q ss_pred ceEEEEEcccCCCCCCCCchHHHHHHHHHHHHhcCCCCceeeceeeeeecccCCcchhHHHHHHHHhccccccccCCCcc
Q 024368 42 AVTIHVTGFKKFHGVSENPTETIVSNLREYMKKKGMPKGLILGSCNILETAGHGAVAPLYQTLQSAINEKDSESANSRRI 121 (268)
Q Consensus 42 ~~~VLVTGFgPF~~~~~NPS~~iv~~L~~~~~~~g~~~~~~i~~~~vlpvs~~~~~~~~y~~v~~~v~~~~~~~~~~~pd 121 (268)
+.+|||||||||+++++||||+++++|++. ++ .+++|. ...+||+|..+...+.+.++ ..+||
T Consensus 23 mk~VLvTGF~PF~g~~~NPS~~~v~~L~~~----~i-~~~~i~-~~~lPv~y~~~~~~l~~~i~-----------~~~Pd 85 (228)
T 4hps_A 23 MKTILVTAFDPFGGEAINPSWEAIKPLQGS----QV-FGANIE-ICQIPCIFDTSLEHLYAAVD-----------KYQPE 85 (228)
T ss_dssp CEEEEEEEECCCTTCSCCHHHHHHGGGTTC----EE-TTEEEE-EEEECSSTTHHHHHHHHHHH-----------HHCCS
T ss_pred CCEEEEEeccCCCCCCCChHHHHHHHhcCc----CC-CCcEEE-EEEcceEeHHHHHHHHHHHH-----------hhCCC
Confidence 458999999999999999999999999763 12 345553 45689988766544444433 36899
Q ss_pred EEEEeeecCCCceeeeeEeeecCCCCCCCCCCCCCCCCccccCCCCCcCcccccCCcHHHHHHHHHhCCCceEEeCCCCc
Q 024368 122 IWVHFGVNSGATRFAIEQQAVNEATFRCPDEMGWKPQKVPIFPADGEISRVRETSIPVEEITRTLAKKGYEVITSDDAGR 201 (268)
Q Consensus 122 lvIHlGva~~~~~i~lE~~A~N~~~~~~pD~~G~~p~~~~I~~~~gp~~~~l~T~Lpv~~l~~~l~~~gi~v~vS~dAG~ 201 (268)
+|||+|++++|+.|++||+|+|..+|++|||+|++|.+++|.+ +||. .++|+||+++|+++|++.|+|+++|+|||+
T Consensus 86 ~VihvG~aggr~~i~lEr~A~N~~d~~~pDn~G~~P~~~~i~~-~Gp~--a~~stLpvk~~v~~l~~~Gipa~vS~dAGt 162 (228)
T 4hps_A 86 LVISVGQAGGRTNITVERVAININDARIPDNAGNQPIDTPVIV-DGPA--AYFSRLPIKTMVNALNTAGIPASVSQTAGT 162 (228)
T ss_dssp EEEEEEECTTCSSEEEECEEESCEECSSCCTTSCCCEEECSST-TCCS--EEECCSCHHHHHHHHHHTTCCEEEESCCCS
T ss_pred EEEEeccCCCCceEEEEEEEeccCCCCCCCcCCCCCCCCcCcC-CCCc--eeeeCCCHHHHHHHHHHcCCcEEEeCCCCc
Confidence 9999999999999999999999889999999999999999987 6775 467999999999999999999999999999
Q ss_pred ccchHHHHHHHHhhhh--cCCceEEEecCCCCC----------CChHHHHHHHHHHHHHHHhC
Q 024368 202 FVCNYVYYHSLRFAEQ--NGTKSLFVHVPLFLT----------IDEETQMQFAASLLEFASQW 252 (268)
Q Consensus 202 YLCNyiyY~sL~~~~~--~~~~~~FVHVP~~~~----------~~~e~~~~~v~~lI~~la~~ 252 (268)
|||||+||+||++..+ .+++++|||||++++ ++.|++.+.+..+|+++++.
T Consensus 163 YvCN~iyY~sL~~~~~~~~~~~~gFIHVP~l~eq~~~~~~~psmsl~~~~~al~~~i~~~~~~ 225 (228)
T 4hps_A 163 FVCNHVMYGLLHYLAQNTPSVRGGFIHVPYLPEQAVKDGNQSSMTLMLMTLALKIAIETAWKN 225 (228)
T ss_dssp SHHHHHHHHHHHHHHHHCTTSEEEEEEECCCGGGGCSSSCCCCCCHHHHHHHHHHHHHHHHHC
T ss_pred chhHHHHHHHHHHHHhcCCCceEEEEEcCCchHhhccCCCCCCCCHHHHHHHHHHHHHHHHhc
Confidence 9999999999998754 358999999999975 56678888888889888764
No 5
>4gxh_A Pyrrolidone-carboxylate peptidase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, hydrolase; 2.70A {Xenorhabdus bovienii}
Probab=100.00 E-value=3.1e-51 Score=361.74 Aligned_cols=189 Identities=25% Similarity=0.371 Sum_probs=159.8
Q ss_pred eEEEEEcccCCCCCCCCchHHHHHHHHHHHHhcCCCCceeeceeeeeecccCCcchhHHHHHHHHhccccccccCCCccE
Q 024368 43 VTIHVTGFKKFHGVSENPTETIVSNLREYMKKKGMPKGLILGSCNILETAGHGAVAPLYQTLQSAINEKDSESANSRRII 122 (268)
Q Consensus 43 ~~VLVTGFgPF~~~~~NPS~~iv~~L~~~~~~~g~~~~~~i~~~~vlpvs~~~~~~~~y~~v~~~v~~~~~~~~~~~pdl 122 (268)
.||||||||||+++++||||+++++|++.. + .+.+|. ...+||+|..+.+.+.+.+++ .+||+
T Consensus 3 ktVLvTGF~PF~~~~~NPS~~~v~~L~~~~----~-~~~~i~-~~~lPv~~~~~~~~l~~~i~~-----------~~Pd~ 65 (216)
T 4gxh_A 3 KTILVTAFDPFGGEAINPSWEAIKPLQGSQ----V-FGANIE-ICQIPCIFDTSLEHLYAAVDK-----------YQPEL 65 (216)
T ss_dssp CEEEEEEECCCTTSSSCHHHHHHGGGTTCE----E-TTEEEE-EEEECSSTTHHHHHHHHHHHH-----------HCCSE
T ss_pred CEEEEeeccCCCCCCCChhHHHHHhhhccc----C-CCceEE-EEecCccHHHHHHHHHHHHHh-----------hCCCE
Confidence 389999999999999999999999997531 1 344553 356899988776666555554 68999
Q ss_pred EEEeeecCCCceeeeeEeeecCCCCCCCCCCCCCCCCccccCCCCCcCcccccCCcHHHHHHHHHhCCCceEEeCCCCcc
Q 024368 123 WVHFGVNSGATRFAIEQQAVNEATFRCPDEMGWKPQKVPIFPADGEISRVRETSIPVEEITRTLAKKGYEVITSDDAGRF 202 (268)
Q Consensus 123 vIHlGva~~~~~i~lE~~A~N~~~~~~pD~~G~~p~~~~I~~~~gp~~~~l~T~Lpv~~l~~~l~~~gi~v~vS~dAG~Y 202 (268)
|||+|++++|..|++||+|+|..++++|||+|++|.+++|.+ +||. .++|+||+++|+++++++|+|+++|+|||+|
T Consensus 66 vi~~G~a~gr~~i~~Er~A~N~~~~r~pDn~G~~p~~~~i~~-~gp~--~~~t~Lpv~~iv~~l~~~gipa~vS~dAG~y 142 (216)
T 4gxh_A 66 VISVGQAGGRTNITVERVAININDARIPDNAGNQPIDTPVIV-DGPA--AYFSRLPIKTMVNALNTAGIPASVSQTAGTF 142 (216)
T ss_dssp EEEEEECTTCSSEEEECEEESCBCCSSCCTTSCCCCSBCSST-TCCS--EEECCSCHHHHHHHHHHTTCCEEEESCCCSS
T ss_pred EEEeccCCCCCcceeEEEEcccCcccCCccCCCCCCCCcccC-CCch--heecCCCHHHHHHHHHHCCCCEEEeCCCccc
Confidence 999999999999999999999999999999999999999997 6775 4679999999999999999999999999999
Q ss_pred cchHHHHHHHHhhhh--cCCceEEEecCCCCC----------CChHHHHHHHHHHHHHHHh
Q 024368 203 VCNYVYYHSLRFAEQ--NGTKSLFVHVPLFLT----------IDEETQMQFAASLLEFASQ 251 (268)
Q Consensus 203 LCNyiyY~sL~~~~~--~~~~~~FVHVP~~~~----------~~~e~~~~~v~~lI~~la~ 251 (268)
||||+||+||++.++ .+.++||||||++++ ++-++..+.+..+|+++++
T Consensus 143 lCN~i~Y~sL~~~~~~~~~~~~gFIHVP~lpeq~~~~~~~psm~l~~~~~al~~~i~~~~~ 203 (216)
T 4gxh_A 143 VCNHVMYGLLHYLAQNTPSVRGGFIHVPYLPEQAVKDGNQSSMTLMLMTLALKIAIETAWK 203 (216)
T ss_dssp HHHHHHHHHHHHHHHHCTTSEEEEEEECBCHHHHHHHSSCCBCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCCeEEEEEcCCChHhhccCCCCCCCCHHHHHHHHHHHHHHHHc
Confidence 999999999998754 368899999998743 3445666677777777665
No 6
>1a2z_A Pyrrolidone carboxyl peptidase; N-pyroglutamate hydrolysis; 1.73A {Thermococcus litoralis} SCOP: c.56.4.1
Probab=100.00 E-value=4.8e-51 Score=361.38 Aligned_cols=189 Identities=26% Similarity=0.441 Sum_probs=159.8
Q ss_pred EEEEEcccCCCCCCCCchHHHHHHHHHHHHhcCCCCceeeceeeeeecccCCcchhHHHHHHHHhccccccccCCCccEE
Q 024368 44 TIHVTGFKKFHGVSENPTETIVSNLREYMKKKGMPKGLILGSCNILETAGHGAVAPLYQTLQSAINEKDSESANSRRIIW 123 (268)
Q Consensus 44 ~VLVTGFgPF~~~~~NPS~~iv~~L~~~~~~~g~~~~~~i~~~~vlpvs~~~~~~~~y~~v~~~v~~~~~~~~~~~pdlv 123 (268)
+|||||||||+++++||||+++++|++.. + .+++|. ...+||+|..+...+.+.++ ..+||+|
T Consensus 3 ~VLvTGF~PF~~~~~NPS~~~v~~L~~~~----~-~~~~i~-~~~lPv~~~~~~~~l~~~i~-----------~~~Pd~V 65 (220)
T 1a2z_A 3 KVLITGFEPFGGDSKNPTEQIAKYFDRKQ----I-GNAMVY-GRVLPVSVKRATIELKRYLE-----------EIKPEIV 65 (220)
T ss_dssp EEEEEEECCCTTCSCCHHHHHHHHHTTCE----E-TTEEEE-EEEECSCHHHHHHHHHHHHH-----------HHCCSEE
T ss_pred EEEEeeccCCCCCCCCcHHHHHHHhhccc----C-CCeEEE-EEEEEeEHHHHHHHHHHHHH-----------HhCCCEE
Confidence 69999999999999999999999998641 1 345553 34678887655444433333 2589999
Q ss_pred EEeeecCCCceeeeeEeeecCCCCCCCCCCCCCCCCccccCCCCCcCcccccCCcHHHHHHHHHhCCCceEEeCCCCccc
Q 024368 124 VHFGVNSGATRFAIEQQAVNEATFRCPDEMGWKPQKVPIFPADGEISRVRETSIPVEEITRTLAKKGYEVITSDDAGRFV 203 (268)
Q Consensus 124 IHlGva~~~~~i~lE~~A~N~~~~~~pD~~G~~p~~~~I~~~~gp~~~~l~T~Lpv~~l~~~l~~~gi~v~vS~dAG~YL 203 (268)
||+|++++++.|++||+|+|.+++++|||+|++|.+++|.+ +||. .++|+||+++|+++++++|+|+++|+|||+||
T Consensus 66 i~vG~aggr~~i~lEr~A~N~~~~~~pDn~G~~p~~~~i~~-~gp~--~~~ttLpi~~iv~~l~~~gip~~vS~~AG~yl 142 (220)
T 1a2z_A 66 INLGLAPTYSNITVERIAVNIIDARIPDNDGYQPIDEKIEE-DAPL--AYMATLPVRAITKTLRDNGIPATISYSAGTYL 142 (220)
T ss_dssp EEEEECTTCSSEEEECEEESCBCCSSCCTTSCCCSSBCSCT-TSCS--EEECCSCHHHHHHHHHHTTCCEEEESCCCSSH
T ss_pred EEecCCCCCceEEEEEEEccCCCCCcCCCCCCCCCCCCccC-CCCc--eeEcCCCHHHHHHHHHHCCCCEEEeCCCCcch
Confidence 99999999999999999999988899999999999999996 6775 46799999999999999999999999999999
Q ss_pred chHHHHHHHHhhhhc--CCceEEEecCCCC---------------CCChHHHHHHHHHHHHHHHhC
Q 024368 204 CNYVYYHSLRFAEQN--GTKSLFVHVPLFL---------------TIDEETQMQFAASLLEFASQW 252 (268)
Q Consensus 204 CNyiyY~sL~~~~~~--~~~~~FVHVP~~~---------------~~~~e~~~~~v~~lI~~la~~ 252 (268)
|||+||+||++.+++ ++++||||||+++ .++.|+..+.+..+|+++++.
T Consensus 143 CN~i~Y~sL~~~~~~~~~~~~gFIHVP~l~~~~~~~~~~~~~~~p~ms~e~~~~al~~~i~~~~~~ 208 (220)
T 1a2z_A 143 CNYVMFKTLHFSKIEGYPLKAGFIHVPYTPDQVVNKFFLLGKNTPSMCLEAEIKAIELAVKVSLDY 208 (220)
T ss_dssp HHHHHHHHHHHHHHHCCCSEEEEEEECCCGGGGTTCEEETTEECCCCCHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHhccCCceeEEEEeCCChhhhhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999998654 7899999999987 255677777788888877654
No 7
>1iu8_A Pyrrolidone-carboxylate peptidase; hydrolase, thiol protease, complete proteome; 1.60A {Pyrococcus horikoshii} SCOP: c.56.4.1
Probab=100.00 E-value=3.3e-51 Score=359.31 Aligned_cols=185 Identities=29% Similarity=0.447 Sum_probs=156.6
Q ss_pred EEEEEcccCCCCCCCCchHHHHHHHHHHHHhcCCCCceeeceeeeeecccCCcchhHHHHHHHHhccccccccCCCccEE
Q 024368 44 TIHVTGFKKFHGVSENPTETIVSNLREYMKKKGMPKGLILGSCNILETAGHGAVAPLYQTLQSAINEKDSESANSRRIIW 123 (268)
Q Consensus 44 ~VLVTGFgPF~~~~~NPS~~iv~~L~~~~~~~g~~~~~~i~~~~vlpvs~~~~~~~~y~~v~~~v~~~~~~~~~~~pdlv 123 (268)
+|||||||||+++++||||+++++|++.+ ++| ....+||+|..+...+.+.++ ..+||+|
T Consensus 2 ~VLvTGF~PF~~~~~NPS~~~v~~L~~~i--------~~i-~~~~lPv~~~~~~~~l~~~~~-----------~~~Pd~v 61 (206)
T 1iu8_A 2 KILLTGFEPFGGDDKNPTMDIVEALSERI--------PEV-VGEILPVSFKRAREKLLKVLD-----------DVRPDIT 61 (206)
T ss_dssp CEEEEEECCCTTCSCCHHHHHHHHHHHHC--------TTE-EEEEECSCHHHHHHHHHHHHH-----------HHCCSEE
T ss_pred EEEEEeecCCCCCCCCcHHHHHHHhccce--------eEE-EEEEEEeEHHHHHHHHHHHHH-----------HhCCCEE
Confidence 69999999999999999999999999863 233 234688887655444433333 2589999
Q ss_pred EEeeecCCCceeeeeEeeecCCCCCCCCCCCCCCCCccccCCCCCcCcccccCCcHHHHHHHHHhCCCceEEeCCCCccc
Q 024368 124 VHFGVNSGATRFAIEQQAVNEATFRCPDEMGWKPQKVPIFPADGEISRVRETSIPVEEITRTLAKKGYEVITSDDAGRFV 203 (268)
Q Consensus 124 IHlGva~~~~~i~lE~~A~N~~~~~~pD~~G~~p~~~~I~~~~gp~~~~l~T~Lpv~~l~~~l~~~gi~v~vS~dAG~YL 203 (268)
||+|++++++.|++||+|+|.+++++|||+|++|.+++|.+ +||. .++|+||+++|++++++.|+|+++|+|||+||
T Consensus 62 i~vG~a~gr~~i~~Er~A~N~~~~~~pDn~G~~p~~~~i~~-~gp~--~~~t~Lpi~~iv~~l~~~gip~~vS~~AG~yl 138 (206)
T 1iu8_A 62 INLGLAPGRTHISVERVAVNMIDARIPDNDGEQPKDEPIVE-GGPA--AYFATIPTREIVEEMKKNGIPAVLSYTAGTYL 138 (206)
T ss_dssp EEEEECTTCSSEEEECEEESCEECSSCCTTSCCCEEECSST-TCCS--EEECCSCHHHHHHHHHHTTCCEEEESCCCSSH
T ss_pred EEcccCCCCceEEEEEEEecCCCCccCCCCCCCCCCCceeC-CCCc--eeEcCCCHHHHHHHHHhCCCCEEEeCCCCccH
Confidence 99999999999999999999988899999999999999996 6775 46799999999999999999999999999999
Q ss_pred chHHHHHHHHhhhhc--CCceEEEecCCCC----------CCChHHHHHHHHHHHHHHHh
Q 024368 204 CNYVYYHSLRFAEQN--GTKSLFVHVPLFL----------TIDEETQMQFAASLLEFASQ 251 (268)
Q Consensus 204 CNyiyY~sL~~~~~~--~~~~~FVHVP~~~----------~~~~e~~~~~v~~lI~~la~ 251 (268)
|||+||+||++.+++ +.++||||||+++ .++.|+..+.+..+|+++++
T Consensus 139 CN~i~Y~sL~~~~~~~~~~~~gFIHVP~~~~~~~~~~~~p~~~~~~~~~al~~~i~~~~~ 198 (206)
T 1iu8_A 139 CNFAMYLTLHTSATKGYPKIAGFIHVPYTPDQVLEKKNTPSMSLDLEIKGVEIAIRVAQS 198 (206)
T ss_dssp HHHHHHHHHHHHHHHCCSSEEEEEEECBCGGGCTTCTTCCBCCHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHhccCCCceEEEEcCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 999999999998642 3399999999987 35667777777777777765
No 8
>1x10_A Pyrrolidone-carboxylate peptidase; stability of protein, hydrolase; 2.00A {Pyrococcus furiosus} PDB: 1z8t_A 1z8x_A 1ioi_A 1x12_A 1z8w_A 2eo8_A 1iof_A 2df5_A
Probab=100.00 E-value=1.2e-50 Score=356.16 Aligned_cols=189 Identities=29% Similarity=0.419 Sum_probs=159.5
Q ss_pred EEEEEcccCCCCCCCCchHHHHHHHHHHHHhcCCCCceeeceeeeeecccCCcchhHHHHHHHHhccccccccCCCccEE
Q 024368 44 TIHVTGFKKFHGVSENPTETIVSNLREYMKKKGMPKGLILGSCNILETAGHGAVAPLYQTLQSAINEKDSESANSRRIIW 123 (268)
Q Consensus 44 ~VLVTGFgPF~~~~~NPS~~iv~~L~~~~~~~g~~~~~~i~~~~vlpvs~~~~~~~~y~~v~~~v~~~~~~~~~~~pdlv 123 (268)
+|||||||||+++++||||+++++|++.. + .+++|. ...+||+|..+.+.+.+.+++ .+||+|
T Consensus 2 ~VLvTGF~PF~~~~~NPS~~~v~~L~~~~----~-~~~~i~-~~~lPv~~~~~~~~l~~~~~~-----------~~pd~v 64 (208)
T 1x10_A 2 KVLVTGFEPFGGEKINPTERIAKDLDGIK----I-GDAQVF-GRVLPVVFGKAKEVLEKTLEE-----------IKPDIA 64 (208)
T ss_dssp EEEEEEECCCTTCSCCHHHHHHHHHTTCE----E-TTEEEE-EEEECSSTTHHHHHHHHHHHH-----------HCCSEE
T ss_pred EEEEEeecCCCCCCCChHHHHHHHhhccC----C-CCeEEE-EEEEeeEHHHHHHHHHHHHHH-----------hCCCEE
Confidence 79999999999999999999999998641 1 345553 456899987765554444433 589999
Q ss_pred EEeeecCCCceeeeeEeeecCCCCCCCCCCCCCCCCccccCCCCCcCcccccCCcHHHHHHHHHhCCCceEEeCCCCccc
Q 024368 124 VHFGVNSGATRFAIEQQAVNEATFRCPDEMGWKPQKVPIFPADGEISRVRETSIPVEEITRTLAKKGYEVITSDDAGRFV 203 (268)
Q Consensus 124 IHlGva~~~~~i~lE~~A~N~~~~~~pD~~G~~p~~~~I~~~~gp~~~~l~T~Lpv~~l~~~l~~~gi~v~vS~dAG~YL 203 (268)
||+|++++++.|++||+|+|.+++++|||+|++|.+++|.+ +||. .++|+||+++|+++++++|+|+++|+|||+||
T Consensus 65 i~vG~a~gr~~i~iEr~A~N~~~~~~pDn~G~~p~~~~i~~-~gp~--~~~ttlpi~~iv~~l~~~gi~~~vS~~AG~yl 141 (208)
T 1x10_A 65 IHVGLAPGRSAISIERIAVNAIDARIPDNEGKKIEDEPIVP-GAPT--AYFSTLPIKKIMKKLHERGIPAYISNSAGLYL 141 (208)
T ss_dssp EEEEECTTCCSEEEECEEESCBCCSSCCTTSCCCCSBCSST-TSCS--EEECCSCHHHHHHHHHHTTCCEEEESCCCSSH
T ss_pred EEecCCCCCceEEeEEEEEcCCCcccCCCCCCCCCCCceeC-CCCc--eeEcCCCHHHHHHHHHhCCCCEEEecCCCcch
Confidence 99999999999999999999988999999999999999996 6775 46799999999999999999999999999999
Q ss_pred chHHHHHHHHhhhhc--CCceEEEecCCCCC--------------CChHHHHHHHHHHHHHHHhC
Q 024368 204 CNYVYYHSLRFAEQN--GTKSLFVHVPLFLT--------------IDEETQMQFAASLLEFASQW 252 (268)
Q Consensus 204 CNyiyY~sL~~~~~~--~~~~~FVHVP~~~~--------------~~~e~~~~~v~~lI~~la~~ 252 (268)
|||+||+||++.+++ +.++||||||++++ ++.|+..+.+..+|+++++.
T Consensus 142 CN~i~Y~sL~~~~~~~~~~~~gFIHVP~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~i~~~~~~ 206 (208)
T 1x10_A 142 SNYVMYLSLHHSATKGYPKMSGFIHVPYIPEQIIDKIGKGQVPPSMSYEMALEAVKVAIEVALEE 206 (208)
T ss_dssp HHHHHHHHHHHHHHHSCCSEEEEEEECBCGGGTHHHHTTSCCCCBCCHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHhccCCCceEEEEcCCCchhhhcccCcCCCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 999999999998642 33999999998763 34566677778888877653
No 9
>2ebj_A Pyrrolidone carboxyl peptidase; TTHA08 degradation of proteins and peptides, structural genomics; 1.90A {Thermus thermophilus}
Probab=100.00 E-value=2.1e-51 Score=356.96 Aligned_cols=182 Identities=25% Similarity=0.372 Sum_probs=152.2
Q ss_pred EEEEEcccCCCCCCCCchHHHHHHHHHHHHhcCCCCceeeceeeeeecccCCcchhHHHHHHHHhccccccccCCCccEE
Q 024368 44 TIHVTGFKKFHGVSENPTETIVSNLREYMKKKGMPKGLILGSCNILETAGHGAVAPLYQTLQSAINEKDSESANSRRIIW 123 (268)
Q Consensus 44 ~VLVTGFgPF~~~~~NPS~~iv~~L~~~~~~~g~~~~~~i~~~~vlpvs~~~~~~~~y~~v~~~v~~~~~~~~~~~pdlv 123 (268)
+|||||||||+++++||||+++++|++.+ .+++|. ...+||+ ..+...+ .+++. ..+||+|
T Consensus 1 ~VLvTGF~PF~~~~~NPS~~~v~~L~~~i------~~~~i~-~~~lPv~-~~~~~~l----~~~~~-------~~~pd~v 61 (192)
T 2ebj_A 1 MILVTGFEPFGSLEHNPSQALLDLLPSEV------DGKPLR-KAVLPVD-AEALGEA----LEDLH-------REGPKAV 61 (192)
T ss_dssp CEEEEEECCCTTCSCCHHHHGGGGSCSEE------TTEEEE-EEEECSC-HHHHHHH----HHHHH-------TTCCSEE
T ss_pred CEEEEeecCCCCCCCChHHHHHHHhhccc------CCcEEE-EEEeccc-ccHHHHH----HHHHH-------HhCCCEE
Confidence 59999999999999999999999998642 345553 3458887 5554433 33332 3689999
Q ss_pred EEeeecCCCceeeeeEeeecCCCCCCCCCCCCCCCCccccCCCCCcCcccccCCcHHHHHHHHHhCCCceEEeCCCCccc
Q 024368 124 VHFGVNSGATRFAIEQQAVNEATFRCPDEMGWKPQKVPIFPADGEISRVRETSIPVEEITRTLAKKGYEVITSDDAGRFV 203 (268)
Q Consensus 124 IHlGva~~~~~i~lE~~A~N~~~~~~pD~~G~~p~~~~I~~~~gp~~~~l~T~Lpv~~l~~~l~~~gi~v~vS~dAG~YL 203 (268)
||+|++++++.|++||+|+|.++|++|||+|++|.+++|.+ +||. .++|+||+++|++++++.|+|+++|+|||+||
T Consensus 62 i~~G~a~~r~~i~~Er~A~N~~~~~~pDn~G~~p~~~~i~~-~gp~--~~~t~lp~~~iv~~l~~~g~p~~vS~~AG~yl 138 (192)
T 2ebj_A 62 LHLGLAEDRPVLTLERLAVNLLDFPRPDNRGRVLEDLPIVP-GGPL--ALPARFPVKPVLARWREAGIPGRPSLSAGSYL 138 (192)
T ss_dssp EEEEECTTCSSEEEECEEESCBCCSSCCTTCCCCCSBCSST-TSCS--EEECBSCHHHHHHHHHHTTCCEEEESCCCSSH
T ss_pred EEeccCCCCceEEeEEEEEcCCCccCCCCCCCCCCCCceeC-CCCc--eeEcCCCHHHHHHHHHHCCCCEEEeCCCCccH
Confidence 99999999999999999999988999999999999999997 6774 46799999999999999999999999999999
Q ss_pred chHHHHHHHHhhhhcCCceEEEecCCCCC---------CChHHHHHHHHHHHHH
Q 024368 204 CNYVYYHSLRFAEQNGTKSLFVHVPLFLT---------IDEETQMQFAASLLEF 248 (268)
Q Consensus 204 CNyiyY~sL~~~~~~~~~~~FVHVP~~~~---------~~~e~~~~~v~~lI~~ 248 (268)
|||+||+||++.+ .+.+++|||||++++ ++.|+..+.+..+|++
T Consensus 139 CN~i~Y~sL~~~~-~~~~~gFIHVP~~~~~~~~~~~p~~~~e~~~~al~~~i~~ 191 (192)
T 2ebj_A 139 CNQAFYLSLYRLP-EEVPVGFLHLPPDETLALKRPRPYVPLEVQARAVRLALEH 191 (192)
T ss_dssp HHHHHHHHHHHSC-TTSCEEEEEECCCHHHHHHSCCCCCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcc-CCCceEEEEeCCChhhhcccCCCCCCHHHHHHHHHHHHhh
Confidence 9999999999986 568999999999874 4556666655555543
No 10
>2pbq_A Molybdenum cofactor biosynthesis MOG; molybdopterin, MPT, structural genomics, NPPSFA, national PR protein structural and functional analyses; 1.70A {Aquifex aeolicus} PDB: 2qq1_A 3mci_A 3mcj_A 3k6a_A* 2f7w_A 2f7y_A 2fuw_A
Probab=37.58 E-value=66 Score=26.12 Aligned_cols=81 Identities=7% Similarity=0.069 Sum_probs=42.1
Q ss_pred ceEEEEEcccCCCCCCCCchHHHHHHHHHHHHhcCCCCceeeceeeeeecccCCcchhHHHHHHHHhccccccccCCCcc
Q 024368 42 AVTIHVTGFKKFHGVSENPTETIVSNLREYMKKKGMPKGLILGSCNILETAGHGAVAPLYQTLQSAINEKDSESANSRRI 121 (268)
Q Consensus 42 ~~~VLVTGFgPF~~~~~NPS~~iv~~L~~~~~~~g~~~~~~i~~~~vlpvs~~~~~~~~y~~v~~~v~~~~~~~~~~~pd 121 (268)
.+-|+.||=+...|...|.+.....++-+.+...| +++ ...++| .-...+.+.+++++. ..+.|
T Consensus 7 rv~IistGdE~~~G~i~Dsn~~~l~~~l~~l~~~G----~~v-~~~iv~----Dd~~~I~~~l~~~~~-------~~~~D 70 (178)
T 2pbq_A 7 VIGVVTISDRASKGIYEDISGKAIIDYLKDVIITP----FEV-EYRVIP----DERDLIEKTLIELAD-------EKGCS 70 (178)
T ss_dssp EEEEEEECHHHHHTSSCCHHHHHHHHHHHHHBCSC----CEE-EEEEEC----SCHHHHHHHHHHHHH-------TSCCS
T ss_pred EEEEEEeCCcCCCCCeecchHHHHHHHHHHHHhCC----CEE-EEEEcC----CCHHHHHHHHHHHHh-------cCCCC
Confidence 45789999998888777776544433322111334 333 233333 112233334443322 12689
Q ss_pred EEEEeeecC-CCceeeee
Q 024368 122 IWVHFGVNS-GATRFAIE 138 (268)
Q Consensus 122 lvIHlGva~-~~~~i~lE 138 (268)
+||..|=.| +...++.|
T Consensus 71 lVittGG~g~g~~D~t~e 88 (178)
T 2pbq_A 71 LILTTGGTGPAPRDVTPE 88 (178)
T ss_dssp EEEEESCCSSSTTCCHHH
T ss_pred EEEECCCCCCCCCCchHH
Confidence 999998644 33344333
No 11
>3aqe_A Receptor activity-modifying protein 2; transmembrane, GPCR, adrenomedullin, trafficking, CLR, CGRP, endoplasmic reticulum, disease; 2.00A {Homo sapiens} PDB: 3aqf_A 2xvt_A
Probab=29.77 E-value=25 Score=26.27 Aligned_cols=20 Identities=20% Similarity=0.237 Sum_probs=16.4
Q ss_pred HHHHHHHHHHhCCCCCCCCC
Q 024368 241 FAASLLEFASQWPNCGWPMD 260 (268)
Q Consensus 241 ~v~~lI~~la~~~~~~~~~~ 260 (268)
-+.+-.+..|+..+|+||..
T Consensus 47 ~LT~Cte~~A~~l~C~wPNp 66 (91)
T 3aqe_A 47 TLRDCLEHFAELFDLGFPNP 66 (91)
T ss_dssp HHHHHHHHHHHHTTCCSSCH
T ss_pred HHHHHHHHHHhhcCCCCCcH
Confidence 35677889999999999963
No 12
>4fc5_A TON_0340, putative uncharacterized protein; unknown function; 2.30A {Thermococcus onnurineus}
Probab=25.90 E-value=3.4e+02 Score=23.87 Aligned_cols=26 Identities=23% Similarity=0.434 Sum_probs=14.4
Q ss_pred EEEEEccc--C-CCCCCCCchH--HHHHHHH
Q 024368 44 TIHVTGFK--K-FHGVSENPTE--TIVSNLR 69 (268)
Q Consensus 44 ~VLVTGFg--P-F~~~~~NPS~--~iv~~L~ 69 (268)
-+++|||- | +...+.=|-. .++++|.
T Consensus 44 vlI~TGFpv~~~~~~ETDGP~GA~ala~aL~ 74 (270)
T 4fc5_A 44 VLIVTGFPIPPMMVAETDGPPGALAIYRAVE 74 (270)
T ss_dssp EEEEECCCBTTTTBCBSSSHHHHHHHHHHHH
T ss_pred eEEEeCcccCCCCCcccCCcHHHHHHHHHHH
Confidence 47999993 1 1134555644 4555553
No 13
>3ej9_B Beta-subunit of trans-3-chloroacrylic acid dehalo; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, isomerase, hydrolase; 1.50A {Pseudomonas pavonaceae} SCOP: d.80.1.1 PDB: 3ej7_B 3ej3_B 1s0y_B
Probab=23.81 E-value=43 Score=23.78 Aligned_cols=32 Identities=3% Similarity=0.118 Sum_probs=23.8
Q ss_pred EecCCCCCCChHHHHHHHHHHHHHHHhCCCCC
Q 024368 225 VHVPLFLTIDEETQMQFAASLLEFASQWPNCG 256 (268)
Q Consensus 225 VHVP~~~~~~~e~~~~~v~~lI~~la~~~~~~ 256 (268)
+|+=-++....|+..+++.++.+++++.++|.
T Consensus 3 ~qi~i~EGRT~EQK~~lI~~VT~a~~eslgap 34 (70)
T 3ej9_B 3 IECHIATGLSVARKQQLIRDVIDVTNKSIGSD 34 (70)
T ss_dssp EEEEEESCCCHHHHHHHHHHHHHHHHHHHCCC
T ss_pred eEEEEecCCCHHHHHHHHHHHHHHHHHHcCCC
Confidence 34433455566777789999999999988874
No 14
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=23.77 E-value=1.8e+02 Score=23.98 Aligned_cols=12 Identities=8% Similarity=0.105 Sum_probs=9.5
Q ss_pred CCccEEEEeeec
Q 024368 118 SRRIIWVHFGVN 129 (268)
Q Consensus 118 ~~pdlvIHlGva 129 (268)
.++|+|||++-.
T Consensus 60 ~~~d~Vih~A~~ 71 (319)
T 4b8w_A 60 VQPTHVIHLAAM 71 (319)
T ss_dssp SCCSEEEECCCC
T ss_pred cCCCEEEECcee
Confidence 479999999753
No 15
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=22.72 E-value=1.4e+02 Score=25.05 Aligned_cols=11 Identities=9% Similarity=-0.191 Sum_probs=8.7
Q ss_pred CCccEEEEeee
Q 024368 118 SRRIIWVHFGV 128 (268)
Q Consensus 118 ~~pdlvIHlGv 128 (268)
...|.|||+.-
T Consensus 50 ~~~d~vihla~ 60 (298)
T 4b4o_A 50 PSCDAAVNLAG 60 (298)
T ss_dssp CSCSEEEECCC
T ss_pred cCCCEEEEecc
Confidence 47899999863
Done!