Query 024369
Match_columns 268
No_of_seqs 188 out of 1580
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 07:03:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024369.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024369hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3oox_A Putative 2OG-Fe(II) oxy 100.0 6E-60 2.1E-64 413.4 19.8 236 5-259 4-249 (312)
2 1gp6_A Leucoanthocyanidin diox 100.0 3.3E-58 1.1E-62 408.6 18.0 233 7-259 46-289 (356)
3 1w9y_A 1-aminocyclopropane-1-c 100.0 2E-57 6.8E-62 397.8 15.0 223 6-259 2-235 (319)
4 1odm_A Isopenicillin N synthas 100.0 4E-56 1.4E-60 392.0 17.5 238 1-259 1-271 (331)
5 1dcs_A Deacetoxycephalosporin 100.0 3.5E-56 1.2E-60 389.0 13.5 215 6-259 3-244 (311)
6 3on7_A Oxidoreductase, iron/as 100.0 4.4E-54 1.5E-58 370.4 16.8 213 6-259 2-232 (280)
7 2dbn_A Hypothetical protein YB 73.2 1.8 6E-05 38.8 2.5 53 6-72 99-151 (461)
8 3o2g_A Gamma-butyrobetaine dio 62.8 6.5 0.00022 34.4 4.0 52 7-73 122-173 (388)
9 1otj_A Alpha-ketoglutarate-dep 61.5 7.3 0.00025 32.2 4.0 50 7-72 17-66 (283)
10 2opi_A L-fuculose-1-phosphate 55.7 6.6 0.00023 31.2 2.6 36 7-55 125-160 (212)
11 4ay7_A Methylcobalamin\: coenz 55.4 21 0.0007 30.5 5.9 41 32-72 304-348 (348)
12 3pvj_A Alpha-ketoglutarate-dep 55.3 10 0.00035 31.4 3.9 50 7-72 15-64 (277)
13 1oih_A Putative alkylsulfatase 54.7 11 0.00036 31.6 3.9 39 32-73 39-78 (301)
14 2fk5_A Fuculose-1-phosphate al 52.5 9.3 0.00032 30.1 3.0 50 7-69 117-175 (200)
15 2qt7_A Receptor-type tyrosine- 49.4 16 0.00054 24.9 3.3 33 156-188 19-51 (91)
16 3itq_A Prolyl 4-hydroxylase, a 49.3 33 0.0011 27.3 5.8 18 52-69 45-62 (216)
17 1m5a_B Insulin B chain; alpha 48.9 20 0.00067 19.0 2.9 19 32-50 9-27 (30)
18 1e4c_P L-fuculose 1-phosphate 47.7 9.6 0.00033 30.3 2.4 36 7-55 122-157 (215)
19 3r1j_A Alpha-ketoglutarate-dep 47.4 17 0.0006 30.5 4.1 39 32-73 33-72 (301)
20 1pvt_A Sugar-phosphate aldolas 46.3 13 0.00044 30.1 3.0 48 7-67 161-210 (238)
21 2x4k_A 4-oxalocrotonate tautom 44.5 27 0.00091 20.9 3.7 25 151-175 18-42 (63)
22 2v9l_A Rhamnulose-1-phosphate 41.8 13 0.00043 30.9 2.3 48 7-67 179-228 (274)
23 2jig_A Prolyl-4 hydroxylase; h 40.9 47 0.0016 26.2 5.5 23 47-69 21-43 (224)
24 1v7z_A Creatininase, creatinin 40.2 21 0.00073 29.2 3.4 36 30-65 94-132 (260)
25 4hti_A Receptor-type tyrosine- 38.7 29 0.00099 24.0 3.3 35 156-190 26-60 (99)
26 3abf_A 4-oxalocrotonate tautom 38.1 37 0.0013 20.5 3.6 25 151-175 16-40 (64)
27 3dkq_A PKHD-type hydroxylase S 37.1 11 0.00038 30.7 1.2 17 226-242 157-174 (243)
28 2opa_A Probable tautomerase YW 36.2 43 0.0015 19.9 3.7 24 151-174 15-38 (61)
29 1otf_A 4-oxalocrotonate tautom 35.7 44 0.0015 19.9 3.7 23 151-173 15-37 (62)
30 2irp_A Putative aldolase class 35.0 23 0.00077 27.8 2.7 25 31-55 149-176 (208)
31 2da7_A Zinc finger homeobox pr 34.3 14 0.00047 23.9 1.0 39 138-176 13-51 (71)
32 3ocr_A Class II aldolase/adduc 33.9 23 0.0008 29.3 2.7 38 6-55 155-192 (273)
33 3no4_A Creatininase, creatinin 32.7 54 0.0018 27.0 4.7 38 30-67 103-143 (267)
34 3jsy_A Acidic ribosomal protei 30.4 90 0.0031 24.6 5.5 40 30-69 4-44 (213)
35 3ry0_A Putative tautomerase; o 29.4 64 0.0022 19.7 3.7 24 151-174 15-38 (65)
36 1zav_A 50S ribosomal protein L 29.3 1.1E+02 0.0037 23.4 5.7 40 30-69 7-47 (180)
37 2j01_J 50S ribosomal protein L 29.2 1.1E+02 0.0038 23.1 5.7 39 30-68 5-45 (173)
38 3qy9_A DHPR, dihydrodipicolina 27.7 36 0.0012 27.6 2.8 39 33-71 89-127 (243)
39 3ijp_A DHPR, dihydrodipicolina 27.6 43 0.0015 27.9 3.3 36 33-68 99-135 (288)
40 3m20_A 4-oxalocrotonate tautom 27.6 69 0.0024 19.4 3.6 24 151-174 14-37 (62)
41 4f3y_A DHPR, dihydrodipicolina 27.1 37 0.0013 28.0 2.8 36 33-68 84-120 (272)
42 1gyx_A YDCE, B1461, hypothetic 26.7 73 0.0025 20.2 3.7 24 151-174 16-39 (76)
43 3m21_A Probable tautomerase HP 26.6 77 0.0026 19.5 3.7 23 151-173 18-40 (67)
44 3mb2_A 4-oxalocrotonate tautom 26.3 76 0.0026 19.9 3.7 24 151-174 16-39 (72)
45 2rdq_A 1-deoxypentalenic acid 25.6 82 0.0028 25.6 4.7 36 35-71 21-56 (288)
46 3i3q_A Alpha-ketoglutarate-dep 23.3 44 0.0015 26.5 2.4 57 186-247 107-176 (211)
47 2opw_A Phyhd1 protein; double- 22.2 94 0.0032 25.3 4.4 36 36-72 6-41 (291)
48 1vm6_A DHPR, dihydrodipicolina 21.1 1.2E+02 0.0042 24.2 4.6 32 34-65 65-97 (228)
49 3ghf_A Septum site-determining 20.7 1.6E+02 0.0055 20.8 4.8 40 6-58 46-86 (120)
50 3djh_A Macrophage migration in 20.5 1E+02 0.0034 21.3 3.7 24 151-174 71-94 (114)
51 2hbt_A EGL nine homolog 1; pro 20.3 1.5E+02 0.0052 23.8 5.2 38 32-70 13-50 (247)
52 3tht_A Alkylated DNA repair pr 20.2 74 0.0025 27.2 3.4 58 185-247 199-267 (345)
53 2do1_A Nuclear protein HCC-1; 20.1 1.1E+02 0.0039 18.5 3.3 31 35-68 15-45 (55)
No 1
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=6e-60 Score=413.37 Aligned_cols=236 Identities=19% Similarity=0.215 Sum_probs=203.0
Q ss_pred CCCCcEEeCCCCcccCCCCCCCCCccHHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHHHhcCCCHHHHhhhccC
Q 024369 5 FKSIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFFDLPYEEKIKIKLT 84 (268)
Q Consensus 5 ~~~iPvIDls~l~~~~~d~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~ 84 (268)
+++||||||+.+.+ ++++++++|.+||+++|||||+||||+.++++++++++++||+||.|+|+++...
T Consensus 4 ~~~iPvIDls~~~~-----------~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~ 72 (312)
T 3oox_A 4 TSAIDPVSFSLYAK-----------DFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGV 72 (312)
T ss_dssp CCSSCCEETHHHHH-----------CHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSS
T ss_pred CCCCCeEEChHhcc-----------cHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccC
Confidence 46899999998853 3678999999999999999999999999999999999999999999999999875
Q ss_pred CCCCCccccccccccc--cCCCCcchhhhcccccccCccccCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Q 024369 85 PATGYRGYQRIGENIT--KGIPDMHEAIDCYKEIQEGMYGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRG 162 (268)
Q Consensus 85 ~~~~~~GY~~~~~~~~--~~~~d~~E~f~~~~~~~~~~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~Ll~~ 162 (268)
...++||.+.+.+.. .+..|++|.|+++.+.+.... ......+|.||+.+++||+++++|+++|.+|+.+||++
T Consensus 73 -~~~~~Gy~~~g~e~~~~~~~~D~kE~~~~~~~~~~~~~---~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~ 148 (312)
T 3oox_A 73 -KGGARGYIPFGVETAKGADHYDLKEFWHMGRDLPPGHR---FRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEA 148 (312)
T ss_dssp -GGGTSEEECCCCCCSTTSCSCCCCEEEEECCCCCTTCG---GGGTSCCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCCccccccccceecCCCCCCCceeeeEeecCCCcCCc---chhccCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 446899998876643 346899999998765432111 01124578999999999999999999999999999999
Q ss_pred HHHHhCCCccccccccccCccccEEEeccCCCCCCC--CCCCCCcccccccc-----CCcceeeecCCCCeEEcCC-CcE
Q 024369 163 IALALGGSPFEFEGVRAGDAFWVLRIIGYPGLSGAK--DQKKPENNIGWYCN-----NTEVDVFFLAYDNWEHMLC-IIS 234 (268)
Q Consensus 163 la~~Lgl~~~~f~~~~~~~~~s~lr~~~YPp~~~~~--~g~~~HtD~g~lT~-----~~glqv~~~~~~~W~~V~p-pg~ 234 (268)
|+++||+++++|.+.+ ..+.+.||++|||||+.+. .|+++|||+|+||+ .+||||+. .+|+|++|+| ||+
T Consensus 149 la~~Lgl~~~~f~~~~-~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLqV~~-~~g~W~~V~p~pg~ 226 (312)
T 3oox_A 149 IATYLKLERDFFKPTV-QDGNSVLRLLHYPPIPKDATGVRAGAHGDINTITLLLGAEEGGLEVLD-RDGQWLPINPPPGC 226 (312)
T ss_dssp HHHHTTSCTTTTHHHH-TTCCCEEEEEEECCCSSCCC--CEEEECCCSSEEEEECCTTSCEEEEC-TTSCEEECCCCSSC
T ss_pred HHHHhCcCHHHHHHHh-cCCcceeeeEecCCCCCCcCCcCccceecCceEEEEeEcCcCceEEEC-CCCcEEECCCCCCe
Confidence 9999999999998887 4566899999999998653 58899999999997 37999986 4799999999 999
Q ss_pred EEEecchhhHhhhcccccccccccc
Q 024369 235 FFLYLFIYLFLWSKLCLCNFSGAHT 259 (268)
Q Consensus 235 ~vVnvGD~l~~~Sn~~l~~~~~~~~ 259 (268)
+||||||+||+||||++ -|..|-
T Consensus 227 ~vVNiGD~l~~~TnG~~--kS~~HR 249 (312)
T 3oox_A 227 LVINIGDMLERLTNNVL--PSTVHR 249 (312)
T ss_dssp EEEEECHHHHHHTTTSS--CCCCEE
T ss_pred EEEEhHHHHHHHhCCee--cCCCce
Confidence 99999999999999999 888884
No 2
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=3.3e-58 Score=408.61 Aligned_cols=233 Identities=22% Similarity=0.317 Sum_probs=201.1
Q ss_pred CCcEEeCCCCcccCCCCCCCCCccHHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHHHhcCCCHHHHhhhccCCC
Q 024369 7 SIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFFDLPYEEKIKIKLTPA 86 (268)
Q Consensus 7 ~iPvIDls~l~~~~~d~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~ 86 (268)
.||+|||+.+.++ + .+++++++++|.+||+++|||||+||||+.++++++++.+++||+||.|+|+++.....
T Consensus 46 ~iPvIDls~l~~~--~-----~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~ 118 (356)
T 1gp6_A 46 QVPTIDLKNIESD--D-----EKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQA 118 (356)
T ss_dssp CCCEEECTTTTCS--C-----HHHHHHHHHHHHHHHHHTSEEEEESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGG
T ss_pred CCCEEEchhccCC--C-----hHHHHHHHHHHHHHHHhCCEEEEeCCCCCHHHHHHHHHHHHHHHCCCHHHHHhhccccc
Confidence 6999999998542 1 13467899999999999999999999999999999999999999999999999987654
Q ss_pred -CCCccccccccccccCCCCcchhhhcccccccCccccCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 024369 87 -TGYRGYQRIGENITKGIPDMHEAIDCYKEIQEGMYGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRGIAL 165 (268)
Q Consensus 87 -~~~~GY~~~~~~~~~~~~d~~E~f~~~~~~~~~~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~Ll~~la~ 165 (268)
..++||.........+..||+|.|.++..... ...+|.||+.++.||+.+++|+++|.+|+.+||++|++
T Consensus 119 ~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~p~~---------~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~ 189 (356)
T 1gp6_A 119 TGKIQGYGSKLANNASGQLEWEDYFFHLAYPEE---------KRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSV 189 (356)
T ss_dssp GTBCSEEECCCCCSTTCCCCSCEEEEEEEESGG---------GCCGGGSCCSSTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCccccCcCcccCCCCCCChhheeeeecCCcc---------ccccccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46889987554334567899999998753211 13568999999999999999999999999999999999
Q ss_pred HhCCCcccccccccc--CccccEEEeccCCCCCCC--CCCCCCcccccccc-----CCcceeeecCCCCeEEcCC-CcEE
Q 024369 166 ALGGSPFEFEGVRAG--DAFWVLRIIGYPGLSGAK--DQKKPENNIGWYCN-----NTEVDVFFLAYDNWEHMLC-IISF 235 (268)
Q Consensus 166 ~Lgl~~~~f~~~~~~--~~~s~lr~~~YPp~~~~~--~g~~~HtD~g~lT~-----~~glqv~~~~~~~W~~V~p-pg~~ 235 (268)
+||+++++|.+.+.. .+.+.||++|||||+.++ .|+++|||+|+||+ .+||||+. +|+|++|+| ||++
T Consensus 190 ~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLQV~~--~g~Wi~V~p~pgal 267 (356)
T 1gp6_A 190 GLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFY--EGKWVTAKCVPDSI 267 (356)
T ss_dssp HTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEEEECSCCCEEEEE--TTEEEECCCCTTCE
T ss_pred HcCCCHHHHHHHhcccCCccceeeeeecCCCCCcccccCcCCccCCCeEEEEEEcCCCCeEEec--CCcEEECcCCCCeE
Confidence 999999999887742 366899999999998764 58999999999997 48999983 799999999 9999
Q ss_pred EEecchhhHhhhcccccccccccc
Q 024369 236 FLYLFIYLFLWSKLCLCNFSGAHT 259 (268)
Q Consensus 236 vVnvGD~l~~~Sn~~l~~~~~~~~ 259 (268)
||||||+||+||||++ -|..|-
T Consensus 268 vVNiGD~l~~~TnG~~--kS~~HR 289 (356)
T 1gp6_A 268 VMHIGDTLEILSNGKY--KSILHR 289 (356)
T ss_dssp EEEECHHHHHHTTTSS--CCCCEE
T ss_pred EEEeccHHHHhcCCEe--eccCce
Confidence 9999999999999999 788773
No 3
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=2e-57 Score=397.82 Aligned_cols=223 Identities=15% Similarity=0.214 Sum_probs=193.6
Q ss_pred CCCcEEeCCCCcccCCCCCCCCCccHHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHHHhcCCCHHHHhhhccCC
Q 024369 6 KSIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFFDLPYEEKIKIKLTP 85 (268)
Q Consensus 6 ~~iPvIDls~l~~~~~d~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~ 85 (268)
+.||+|||+.+.. +++++++++|.+||+++|||||+||||+.++++++++.+++||+||.|+|+++...
T Consensus 2 ~~iPvIDls~l~~----------~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~- 70 (319)
T 1w9y_A 2 ENFPIISLDKVNG----------VERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVA- 70 (319)
T ss_dssp CCCCEEEGGGGGS----------TTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred CCCCEEECcccCc----------ccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccC-
Confidence 4699999999842 24678999999999999999999999999999999999999999999999998643
Q ss_pred CCCCccccccccccccCCCCcchhhhcccccccCccccCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 024369 86 ATGYRGYQRIGENITKGIPDMHEAIDCYKEIQEGMYGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRGIAL 165 (268)
Q Consensus 86 ~~~~~GY~~~~~~~~~~~~d~~E~f~~~~~~~~~~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~Ll~~la~ 165 (268)
.+||.+.+.+ .+..||+|.|.++... ...+|.||+.++.||+.+++|+++|.+|+.+||++|++
T Consensus 71 ---~~Gy~~~~~e--~~~~d~ke~~~~~~~p-----------~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~ 134 (319)
T 1w9y_A 71 ---SKALEGVQAE--VTDMDWESTFFLKHLP-----------ISNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCE 134 (319)
T ss_dssp ---HHHHTTCCCC--GGGCCCCEEEEEEEES-----------CCGGGGCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---CCCCCccccc--CCCCChhhheeeecCC-----------cccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3588766443 2567999999986521 12367899999999999999999999999999999999
Q ss_pred HhCCCcccccccccc--CccccEEEeccCCCCCCC--CCCCCCcccccccc------CCcceeeecCCCCeEEcCC-CcE
Q 024369 166 ALGGSPFEFEGVRAG--DAFWVLRIIGYPGLSGAK--DQKKPENNIGWYCN------NTEVDVFFLAYDNWEHMLC-IIS 234 (268)
Q Consensus 166 ~Lgl~~~~f~~~~~~--~~~s~lr~~~YPp~~~~~--~g~~~HtD~g~lT~------~~glqv~~~~~~~W~~V~p-pg~ 234 (268)
+||+++++|.+.+.. .+.+.||++|||||+.++ .|+++|||+|+||+ .+||||. .+|+|++|+| ||+
T Consensus 135 ~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~~v~GLQV~--~~g~Wi~V~p~pga 212 (319)
T 1w9y_A 135 NLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLL--KDGQWIDVPPMRHS 212 (319)
T ss_dssp HHTCCTTHHHHHHHTTTCCEEEEEEEECCCCSCGGGGSSCCCBCCSSSEEEEEESSSCCCEEEE--ETTEEEECCCCTTC
T ss_pred HcCCCHHHHHHHhcCcCCccceeEEEecCCCcccccccccccccCCCceEEEEecCCCCeeeEe--eCCeEEEcccCCCc
Confidence 999999999887742 356789999999998764 58999999999995 3789996 4799999999 999
Q ss_pred EEEecchhhHhhhcccccccccccc
Q 024369 235 FFLYLFIYLFLWSKLCLCNFSGAHT 259 (268)
Q Consensus 235 ~vVnvGD~l~~~Sn~~l~~~~~~~~ 259 (268)
+||||||+||+||||++ -|..|-
T Consensus 213 lvVNiGD~l~~~SnG~~--kS~~HR 235 (319)
T 1w9y_A 213 IVVNLGDQLEVITNGKY--KSVMHR 235 (319)
T ss_dssp EEEEECHHHHHHTTTSS--CCCCEE
T ss_pred EEEEhHHHHHHHhCCee--ecccce
Confidence 99999999999999999 787773
No 4
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=4e-56 Score=391.98 Aligned_cols=238 Identities=21% Similarity=0.310 Sum_probs=197.8
Q ss_pred CCCC-CCCCcEEeCCCCcccCCCCCCCCCccHHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHHHh-cCCCHHHH
Q 024369 1 MATD-FKSIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKF-FDLPYEEK 78 (268)
Q Consensus 1 m~~~-~~~iPvIDls~l~~~~~d~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~f-F~lp~e~K 78 (268)
|+++ ...||+|||+.+.++ + .+++++++++|.+||+++|||||+|||| +++++++++++| |+||.|+|
T Consensus 1 m~s~~~~~iPvIDls~l~~~--~-----~~~~~~~~~~l~~A~~~~GFf~v~nHGi---l~~~~~~~~~~F~F~lP~eeK 70 (331)
T 1odm_A 1 MGSVSKANVPKIDVSPLFGD--D-----QAAKMRVAQQIDAASRDTGFFYAVNHGI---NVQRLSQKTKEFHMSITPEEK 70 (331)
T ss_dssp --CCCBCCCCEEECGGGGSS--C-----HHHHHHHHHHHHHHHHTTSEEEEESCCC---CHHHHHHHHHHHHHHCCHHHH
T ss_pred CCcccCCCCCEEEchHhcCC--C-----hHHHHHHHHHHHHHHHhCCEEEEEccce---eHHHHHHHHHhccCCCCHHHH
Confidence 7764 467999999998652 1 2357789999999999999999999999 899999999999 99999999
Q ss_pred hhhccCCCCCCccccccccccc-c-------CCCCcchhhhcccccccCccc-cCCCCCCCCCCCCCC--CchHHHHHHH
Q 024369 79 IKIKLTPATGYRGYQRIGENIT-K-------GIPDMHEAIDCYKEIQEGMYG-ALGKTMEGCNQWPLN--PPNFRALMEE 147 (268)
Q Consensus 79 ~~~~~~~~~~~~GY~~~~~~~~-~-------~~~d~~E~f~~~~~~~~~~~~-~~~~~~~~~~~wP~~--~~~fr~~~~~ 147 (268)
+++.. +||.+.+.+.. . +..|++|+|.++......... ..+.++.++|.||+. +++||+++++
T Consensus 71 ~~~~~------~Gy~~~~~e~~~~~~~~~~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~n~wP~~~~~p~fr~~~~~ 144 (331)
T 1odm_A 71 WDLAI------RAYNKEHQDQVRAGYYLSIPGKKAVESFCYLNPNFTPDHPRIQAKTPTHEVNVWPDETKHPGFQDFAEQ 144 (331)
T ss_dssp HHHBC------TTTCTTCTTCSSSEEECCBTTTBCCEEEEECCTTCCTTSHHHHTTCTTCCCCCCCCTTTSTTHHHHHHH
T ss_pred Hhhhh------cCCCcCCccccccccccccCCCCChhheEecccCCccccccccccccccCCCCCCCCCCChHHHHHHHH
Confidence 99974 78887765431 1 467999999998653321111 112234568999998 8999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCccccccccccCccccEE--EeccC------C---CCCCC---CCCCCCcccccccc-
Q 024369 148 YVNLCTDLSRKIMRGIALALGGSPFEFEGVRAGDAFWVLR--IIGYP------G---LSGAK---DQKKPENNIGWYCN- 212 (268)
Q Consensus 148 y~~~~~~l~~~Ll~~la~~Lgl~~~~f~~~~~~~~~s~lr--~~~YP------p---~~~~~---~g~~~HtD~g~lT~- 212 (268)
|+++|.+|+.+||++|+++||+++++|.+.+ ..+.+.|| ++||| | |+.++ .|+++|||+|+||+
T Consensus 145 y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~-~~~~~~lr~~l~~YP~~~~~~p~~~~~~~~~~~~g~~~HtD~g~lTlL 223 (331)
T 1odm_A 145 YYWDVFGLSSALLKGYALALGKEENFFARHF-KPDDTLASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVL 223 (331)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCTTTTGGGC-CTTTCCCEEEEEEECCCSSCCGGGCEECTTSCEEEEEEECCSSSEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCHHHHHHHh-cCcHHHHHHHHhhCCCcccccccccCCCccccccccccccCCCeEEEE
Confidence 9999999999999999999999999999887 45678999 99999 7 66543 47999999999996
Q ss_pred ----CCcceeeecCCCCeEEcCC-CcEEEEecchhhHhhhcccccccccccc
Q 024369 213 ----NTEVDVFFLAYDNWEHMLC-IISFFLYLFIYLFLWSKLCLCNFSGAHT 259 (268)
Q Consensus 213 ----~~glqv~~~~~~~W~~V~p-pg~~vVnvGD~l~~~Sn~~l~~~~~~~~ 259 (268)
.+||||+.. +| |++|+| ||++||||||+||+||||++ -|..|-
T Consensus 224 ~qd~v~GLQV~~~-~g-Wi~V~p~pgalvVNiGD~l~~~TnG~~--kS~~HR 271 (331)
T 1odm_A 224 YQSNVQNLQVETA-AG-YQDIEADDTGYLINCGSYMAHLTNNYY--KAPIHR 271 (331)
T ss_dssp EECSSCCEEEEET-TE-EEECCCCTTSEEEEECHHHHHHTTTSS--CCCCEE
T ss_pred eeCCCCCEEEEcC-CC-eEECCCCCCeEEEEccHHHHHHhCCEe--eCCCce
Confidence 389999864 67 999999 99999999999999999999 888883
No 5
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=3.5e-56 Score=389.00 Aligned_cols=215 Identities=15% Similarity=0.210 Sum_probs=177.6
Q ss_pred CCCcEEeCCCCcccCCCCCCCCCccHHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHHHhcCCC-HHHHhhhccC
Q 024369 6 KSIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFFDLP-YEEKIKIKLT 84 (268)
Q Consensus 6 ~~iPvIDls~l~~~~~d~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~lp-~e~K~~~~~~ 84 (268)
..||+|||+.+.++ + . .++|.+||+++|||||+||||+.++++++++++++||+|| .|+|+++...
T Consensus 3 ~~iPvIDls~l~~~--~-------~----~~~l~~A~~~~GFf~l~nHGi~~~l~~~~~~~~~~fF~lP~~e~K~~~~~~ 69 (311)
T 1dcs_A 3 TTVPTFSLAELQQG--L-------H----QDEFRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSP 69 (311)
T ss_dssp CCCCEEEHHHHHTT--C-------S----HHHHHHHHHHTCEEEEESSSCCHHHHHHHHHHHHHHHHHCCHHHHHHTBCS
T ss_pred CCCcEEEchhhcCC--C-------H----HHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCcHHHhHHhhcc
Confidence 38999999988542 1 1 1399999999999999999999999999999999999999 9999999876
Q ss_pred CCCCCccccccccccc------cCCCCcchhhhcccccccCccccCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHH
Q 024369 85 PATGYRGYQRIGENIT------KGIPDMHEAIDCYKEIQEGMYGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRK 158 (268)
Q Consensus 85 ~~~~~~GY~~~~~~~~------~~~~d~~E~f~~~~~~~~~~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ 158 (268)
....++||.+.+.+.. .+..|++|.|.++.. +|.|| ++.||+.+++|+++|.+|+.+
T Consensus 70 ~~~~~~Gy~~~~~e~~~~~~~~~~~~d~~E~~~~~~~---------------~n~wP--~~~fr~~~~~y~~~~~~l~~~ 132 (311)
T 1dcs_A 70 VPTMRRGFTGLESESTAQITNTGSYSDYSMCYSMGTA---------------DNLFP--SGDFERIWTQYFDRQYTASRA 132 (311)
T ss_dssp SCCSSSEEEEC-----------------CEEEEECSS---------------SCCCS--CHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCceeeccccccccccCCCCCCCcceeeeccCC---------------CCCCC--ChHHHHHHHHHHHHHHHHHHH
Confidence 5556899998776532 457899999998642 57899 899999999999999999999
Q ss_pred HHHHHHHHhCC----CccccccccccCccccEEEeccCCCCCC------CCCCCCCcccccccc------CCc---ceee
Q 024369 159 IMRGIALALGG----SPFEFEGVRAGDAFWVLRIIGYPGLSGA------KDQKKPENNIGWYCN------NTE---VDVF 219 (268)
Q Consensus 159 Ll~~la~~Lgl----~~~~f~~~~~~~~~s~lr~~~YPp~~~~------~~g~~~HtD~g~lT~------~~g---lqv~ 219 (268)
||++|+++||+ ++++|.+. .+.||++|||||+.+ ..|+++|||+|+||+ .+| |||+
T Consensus 133 ll~~la~~Lgl~~~~~~~~f~~~-----~~~lrl~~YPp~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~v~G~~~LqV~ 207 (311)
T 1dcs_A 133 VAREVLRATGTEPDGGVEAFLDC-----EPLLRFRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQAE 207 (311)
T ss_dssp HHHHHHHHTTCCCTTCHHHHHSC-----CCEEEEEEECC-----------CCEEEEEECSSEEEEEEECCTTCCCCEEEE
T ss_pred HHHHHHHHcCCCCcCcHhHHhhc-----chhhheecCCCCCcccccCccccccccccCCCeEEEEecCCCCCCceeEEEE
Confidence 99999999999 78888654 578999999999875 346999999999995 368 9998
Q ss_pred ecCCCCeEEcCC-CcEEEEecchhhHhhhcccccccccccc
Q 024369 220 FLAYDNWEHMLC-IISFFLYLFIYLFLWSKLCLCNFSGAHT 259 (268)
Q Consensus 220 ~~~~~~W~~V~p-pg~~vVnvGD~l~~~Sn~~l~~~~~~~~ 259 (268)
. +|+|++|+| ||++||||||+||+||||++ -|..|-
T Consensus 208 ~--~g~W~~V~p~pg~lvVNiGD~l~~~TnG~~--kS~~HR 244 (311)
T 1dcs_A 208 V--GGAFTDLPYRPDAVLVFCGAIATLVTGGQV--KAPRHH 244 (311)
T ss_dssp E--TTEEEECCCCTTCEEEEECHHHHHHTTSCS--CCCCEE
T ss_pred e--CCEEEeCcCCCCeEEEEHHHHHHHHhCCcc--cCCCce
Confidence 7 799999999 99999999999999999999 788883
No 6
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=4.4e-54 Score=370.38 Aligned_cols=213 Identities=18% Similarity=0.235 Sum_probs=176.1
Q ss_pred CCCcEEeCCCCcccCCCCCCCCCccHHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHHHhcCCCHHHHhhhccCC
Q 024369 6 KSIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFFDLPYEEKIKIKLTP 85 (268)
Q Consensus 6 ~~iPvIDls~l~~~~~d~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~ 85 (268)
+.||||||+.. +.+++|.+||+++|||||+||||+.++++++++++++||++ |+|+++...+
T Consensus 2 ~~IPvIDls~~----------------~~~~~l~~A~~~~GFF~v~nHGi~~~li~~~~~~~~~FF~l--e~K~k~~~~~ 63 (280)
T 3on7_A 2 MKLETIDYRAA----------------DSAKRFVESLRETGFGVLSNHPIDKELVERIYTEWQAFFNS--EAKNEFMFNR 63 (280)
T ss_dssp --CCEEETTST----------------THHHHHHHHHHHHSEEEEESCSSCHHHHHHHHHHHHHHHTS--GGGGGGBCCT
T ss_pred CCCCEEECCCh----------------hHHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHhhh--HHHHHhccCC
Confidence 47999999963 24799999999999999999999999999999999999998 7999987654
Q ss_pred CCCCccccccc-cccc--cCCCCcchhhhcccccccCccccCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Q 024369 86 ATGYRGYQRIG-ENIT--KGIPDMHEAIDCYKEIQEGMYGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRG 162 (268)
Q Consensus 86 ~~~~~GY~~~~-~~~~--~~~~d~~E~f~~~~~~~~~~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~Ll~~ 162 (268)
..++||.+.+ .+.. ....|++|.|++. +||..+++||+.+++|+++|.+|+.+||++
T Consensus 64 -~~~~GY~~~~~~e~~~~~~~~D~kE~~~~~-------------------p~~~~p~~fr~~~~~y~~~~~~l~~~ll~~ 123 (280)
T 3on7_A 64 -ETHDGFFPASISETAKGHTVKDIKEYYHVY-------------------PWGRIPDSLRANILAYYEKANTLASELLEW 123 (280)
T ss_dssp -TTCCEEECCC--------CCCCSCEEEEEC-------------------TTSCCCGGGHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCCCccccCccccccCCCCcccHHHHHhcC-------------------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3589998876 3433 2367999998752 367777899999999999999999999999
Q ss_pred HHHHhCCCc--cc---cccccccCccccEEEeccCCCCCCC----CCCCCCcccccccc-----CCcceeeecCCCCeEE
Q 024369 163 IALALGGSP--FE---FEGVRAGDAFWVLRIIGYPGLSGAK----DQKKPENNIGWYCN-----NTEVDVFFLAYDNWEH 228 (268)
Q Consensus 163 la~~Lgl~~--~~---f~~~~~~~~~s~lr~~~YPp~~~~~----~g~~~HtD~g~lT~-----~~glqv~~~~~~~W~~ 228 (268)
|+++||++. .+ |.+.+.+...+.||++|||||+.++ .|+++|||+|+||+ .+||||+.+ +|+|++
T Consensus 124 la~~Lgl~~~~~~~~~~~~~~~~~~~~~lr~~~YP~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqV~~~-~g~W~~ 202 (280)
T 3on7_A 124 IETYSPDEIKAKFSIPLPEMIANSHKTLLRILHYPPMTGDEEMGAIRAAAHEDINLITVLPTANEPGLQVKAK-DGSWLD 202 (280)
T ss_dssp HHHTSCHHHHTTCSSCHHHHHTTCSSCEEEEEEECCCCTTCCCCSEEEEEECCCSSEEEEECCSCCCEEEECT-TSCEEE
T ss_pred HHHHcCCcchhhhhHHHHHHhcCCccceEEEEECCCCCCccccCcccccCCCCCCeEEEEEecCCCCeEEEcC-CCCEEE
Confidence 999999863 32 3333322334789999999998653 47899999999997 379999864 799999
Q ss_pred cCC-CcEEEEecchhhHhhhcccccccccccc
Q 024369 229 MLC-IISFFLYLFIYLFLWSKLCLCNFSGAHT 259 (268)
Q Consensus 229 V~p-pg~~vVnvGD~l~~~Sn~~l~~~~~~~~ 259 (268)
|+| ||++||||||+||+||||++ -|..|-
T Consensus 203 V~p~pg~~vVNiGD~l~~~Tng~~--kS~~HR 232 (280)
T 3on7_A 203 VPSDFGNIIINIGDMLQEASDGYF--PSTSHR 232 (280)
T ss_dssp CCCCTTCEEEEECHHHHHHTTTSS--CCCCEE
T ss_pred CcCCCCEEEEEcChHHHHHhCCcc--cCCCce
Confidence 999 99999999999999999999 888884
No 7
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=73.23 E-value=1.8 Score=38.79 Aligned_cols=53 Identities=19% Similarity=0.325 Sum_probs=41.1
Q ss_pred CCCcEEeCCCCcccCCCCCCCCCccHHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHHHhcC
Q 024369 6 KSIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFFD 72 (268)
Q Consensus 6 ~~iPvIDls~l~~~~~d~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~ 72 (268)
..||.||++.+.++ .+.+...+.+++.|+++|.|. ||.+...+..+...+|.+
T Consensus 99 ~~iP~i~f~di~~~-------------~~s~~~~~~ir~rG~vVIRgv-vp~e~A~~~~~~~~~yl~ 151 (461)
T 2dbn_A 99 AVWPVLSYADIKAG-------------HVTAEQREQIKRRGCAVIKGH-FPREQALGWDQSMLDYLD 151 (461)
T ss_dssp CSSCEEEHHHHHHT-------------CCCHHHHHHHHHHSEEEEETS-SCHHHHHHHHHHHHHHHH
T ss_pred CCcceecHHHhcCC-------------CCCHHHHHHHHhccEEEECCC-CCHHHHHHHHHHHHHHHH
Confidence 46999999987542 123566788899999999887 899888888777777763
No 8
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=62.75 E-value=6.5 Score=34.42 Aligned_cols=52 Identities=13% Similarity=0.226 Sum_probs=39.9
Q ss_pred CCcEEeCCCCcccCCCCCCCCCccHHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHHHhcCC
Q 024369 7 SIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFFDL 73 (268)
Q Consensus 7 ~iPvIDls~l~~~~~d~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~l 73 (268)
++|.||++.+... .+...++.+|+.++|++.+.+-.++.+ ...+.++.|-.+
T Consensus 122 ~~~~~~~~~~l~~------------d~~~~~~~~~l~~~Gvv~frg~~~~~~---~~~~~a~~~G~l 173 (388)
T 3o2g_A 122 QLPTLDFEDVLRY------------DEHAYKWLSTLKKVGIVRLTGASDKPG---EVSKLGKRMGFL 173 (388)
T ss_dssp CCCEEEHHHHHHC------------HHHHHHHHHHHHHHSEEEEECCCSSTT---HHHHHHHHHSCC
T ss_pred CCCccCHHHHhcC------------HHHHHHHHHHHHhcCEEEEeCCCCCHH---HHHHHHHHhCCC
Confidence 6899999987531 467889999999999999999888764 344556666544
No 9
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=61.49 E-value=7.3 Score=32.22 Aligned_cols=50 Identities=16% Similarity=0.281 Sum_probs=35.2
Q ss_pred CCcEEeCCCCcccCCCCCCCCCccHHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHHHhcC
Q 024369 7 SIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFFD 72 (268)
Q Consensus 7 ~iPvIDls~l~~~~~d~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~ 72 (268)
+|+-||++...+ .+..++|.+++.++|++.+.+-.++.+ ...+.++.|-.
T Consensus 17 ei~gvdl~~~l~-------------~~~~~~l~~~l~~~Gvv~frg~~~~~~---~~~~~~~~~G~ 66 (283)
T 1otj_A 17 QISGADLTRPLS-------------DNQFEQLYHAVLRHQVVFLRDQAITPQ---QQRALAQRFGE 66 (283)
T ss_dssp EEESCCSSSCCC-------------HHHHHHHHHHHHHHSEEEECSCCCCHH---HHHHHHHTTSC
T ss_pred EEECCCcCccCC-------------HHHHHHHHHHHHHCCEEEECCCCCCHH---HHHHHHHHhCC
Confidence 355567776432 356899999999999999999888764 34445666543
No 10
>2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron}
Probab=55.74 E-value=6.6 Score=31.18 Aligned_cols=36 Identities=19% Similarity=0.236 Sum_probs=28.5
Q ss_pred CCcEEeCCCCcccCCCCCCCCCccHHHHHHHHHHHHHhcceEEEEcCCC
Q 024369 7 SIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGI 55 (268)
Q Consensus 7 ~iPvIDls~l~~~~~d~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi 55 (268)
.||++++.... ..++++.+.+++.+.-.+.|.|||+
T Consensus 125 ~v~~~~y~~~g-------------~~~la~~i~~~l~~~~avll~nHG~ 160 (212)
T 2opi_A 125 EIPVIPYYRPG-------------SPELAKAVVEAMLKHNSVLLTNHGQ 160 (212)
T ss_dssp CCCEECCCCTT-------------CHHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CeEEEcCCCCC-------------cHHHHHHHHHHhccCCEEEEcCCCc
Confidence 68888876542 2468889999998888888899996
No 11
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=55.42 E-value=21 Score=30.52 Aligned_cols=41 Identities=12% Similarity=0.201 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHhcceEEEEcCCCC----HHHHHHHHHHHHHhcC
Q 024369 32 SQVVKQLDKACKEAGFFYVKGHGIP----ESLINDVKNITQKFFD 72 (268)
Q Consensus 32 ~~~~~~l~~A~~~~GFf~l~nhGi~----~~~~~~~~~~~~~fF~ 72 (268)
+++.+++.+.++.-||+.-.+|||+ .+-++.+.+++++|++
T Consensus 304 e~i~~~v~~~l~~~g~I~~~Ghgi~p~tp~env~a~v~av~ey~A 348 (348)
T 4ay7_A 304 DKIKAEAKEALEGGIDVLAPGCGIAPMTPLENVKALVAARDEFYA 348 (348)
T ss_dssp HHHHHHHHHHHHTTCSEEEESSSCCTTCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhCCCCEEeCCCccCCCCCHHHHHHHHHHHHHhcC
Confidence 4566677777788888777799975 4889999999999874
No 12
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=55.33 E-value=10 Score=31.41 Aligned_cols=50 Identities=14% Similarity=0.278 Sum_probs=36.7
Q ss_pred CCcEEeCCCCcccCCCCCCCCCccHHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHHHhcC
Q 024369 7 SIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFFD 72 (268)
Q Consensus 7 ~iPvIDls~l~~~~~d~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~ 72 (268)
+|.-|||+...+ .+..++|.+|+.++|.+.+.+-.++.+ +..+.++.|=.
T Consensus 15 ei~gvdl~~~l~-------------~~~~~~l~~~l~~~gvv~fR~q~l~~~---~~~~fa~~fG~ 64 (277)
T 3pvj_A 15 QISGVDISRDIS-------------AEERDAIEQALLQHQVLFLRDQPINPE---QQARFAARFGD 64 (277)
T ss_dssp EEESCCTTSCCC-------------HHHHHHHHHHHHHHSEEEESSCCCCHH---HHHHHHGGGSC
T ss_pred EEeCCCccccCC-------------HHHHHHHHHHHHHCCEEEECCCCCCHH---HHHHHHHHhCC
Confidence 466678877432 367899999999999999999888764 44455666644
No 13
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=54.66 E-value=11 Score=31.57 Aligned_cols=39 Identities=8% Similarity=0.227 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHhcceEEEEcCC-CCHHHHHHHHHHHHHhcCC
Q 024369 32 SQVVKQLDKACKEAGFFYVKGHG-IPESLINDVKNITQKFFDL 73 (268)
Q Consensus 32 ~~~~~~l~~A~~~~GFf~l~nhG-i~~~~~~~~~~~~~~fF~l 73 (268)
.+..++|.+++.++|++.+.+-. ++. +...+.++.|-.+
T Consensus 39 ~~~~~~l~~~l~~~Gvv~fRg~~~l~~---~~~~~~~~~fG~l 78 (301)
T 1oih_A 39 AATVEAIQAALVRHKVIFFRGQTHLDD---QSQEGFAKLLGEP 78 (301)
T ss_dssp HHHHHHHHHHHHHHSEEEECCCTTCCH---HHHHHHHHTTSCB
T ss_pred HHHHHHHHHHHHHCCEEEECCCCCCCH---HHHHHHHHHhCCC
Confidence 35688999999999999999887 875 3455556666443
No 14
>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A
Probab=52.55 E-value=9.3 Score=30.07 Aligned_cols=50 Identities=12% Similarity=0.254 Sum_probs=34.1
Q ss_pred CCcEE-eCCCCcccCCCCCCCCCccHHHHHHHHHHHHHhcceEEEEcCCCC--H------HHHHHHHHHHHH
Q 024369 7 SIPII-DVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIP--E------SLINDVKNITQK 69 (268)
Q Consensus 7 ~iPvI-Dls~l~~~~~d~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~--~------~~~~~~~~~~~~ 69 (268)
.||++ ++.... .+++++.+.+++++.-.+.|.|||+- - +.+++++..+..
T Consensus 117 ~ip~~~~y~~~g-------------~~ela~~i~~~l~~~~avll~nHG~~~~G~~~~~~~~~~eA~~~~~~ 175 (200)
T 2fk5_A 117 EVPVLAPKTVSA-------------TEEAALSVAEALREHRACLLRGHGAFAVGLKEAPEEALLEAYGLMTT 175 (200)
T ss_dssp CEEEECCSCCSS-------------SHHHHHHHHHHHHHCSEEEETTTEEEEEECCSSHHHHHHHHHHHHHH
T ss_pred CceEecCCCCCC-------------cHHHHHHHHHHhCcCCEEEECCCCcEEEeCCCCCcCcHHHHHHHHHH
Confidence 67888 665432 25788889999988888888999852 1 455565555443
No 15
>2qt7_A Receptor-type tyrosine-protein phosphatase-like N; IA-2, ICA-512, protein-tyrosine phosphatase, transmembrane protein, diabetes, autoimmunity; 1.30A {Homo sapiens} PDB: 3n01_A 3np5_A 3ng8_A 3n4w_A
Probab=49.43 E-value=16 Score=24.90 Aligned_cols=33 Identities=18% Similarity=0.120 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHhCCCccccccccccCccccEEE
Q 024369 156 SRKIMRGIALALGGSPFEFEGVRAGDAFWVLRI 188 (268)
Q Consensus 156 ~~~Ll~~la~~Lgl~~~~f~~~~~~~~~s~lr~ 188 (268)
+.+||+.+++.|++|.++|.+.-...+.-++|+
T Consensus 19 G~~l~~~la~ll~l~~~~Ft~i~V~g~aVTFrV 51 (91)
T 2qt7_A 19 GVKLLEILAEHVHMSSGSFINISVVGPALTFRI 51 (91)
T ss_dssp HHHHHHHHHHHHTSCGGGEEEEEEETTEEEEEE
T ss_pred HHHHHHHHHHHhcCCccceeeeEeecceEEEEe
Confidence 678999999999999999987543445556676
No 16
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=49.27 E-value=33 Score=27.25 Aligned_cols=18 Identities=6% Similarity=0.337 Sum_probs=14.2
Q ss_pred cCCCCHHHHHHHHHHHHH
Q 024369 52 GHGIPESLINDVKNITQK 69 (268)
Q Consensus 52 nhGi~~~~~~~~~~~~~~ 69 (268)
..=++++.++.+.++++.
T Consensus 45 ~~fLs~~Ec~~Li~~a~~ 62 (216)
T 3itq_A 45 GNVLSDEECDELIELSKS 62 (216)
T ss_dssp ESCSCHHHHHHHHHHHHH
T ss_pred CCcCCHHHHHHHHHHhhc
Confidence 345889999999998874
No 17
>1m5a_B Insulin B chain; alpha helices, beta sheets, 3(10) helices, disulphide bridge hormone-growth factor complex; 1.20A {Sus scrofa} SCOP: g.1.1.1 PDB: 1aph_B 1b18_B 1b19_B 1b2a_B 1b2b_B 1b2c_B 1b2d_B 1b2e_B 1b2f_B 1b2g_B 1bph_B 1cph_B 1dph_B 1b17_B 1mpj_B 1wav_B 1zni_B 2a3g_B 2bn1_B 2bn3_B ...
Probab=48.92 E-value=20 Score=18.99 Aligned_cols=19 Identities=47% Similarity=0.887 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHHhcceEEE
Q 024369 32 SQVVKQLDKACKEAGFFYV 50 (268)
Q Consensus 32 ~~~~~~l~~A~~~~GFf~l 50 (268)
..+++.|.-.|.+-||||.
T Consensus 9 s~LVdaL~~vCgdRGF~~~ 27 (30)
T 1m5a_B 9 SHLVEALYLVCGERGFFYT 27 (30)
T ss_dssp HHHHHHHHHHHGGGCEEEC
T ss_pred HHHHHHHHHHhccCccccC
Confidence 5789999999999999984
No 18
>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P
Probab=47.70 E-value=9.6 Score=30.29 Aligned_cols=36 Identities=19% Similarity=0.281 Sum_probs=27.9
Q ss_pred CCcEEeCCCCcccCCCCCCCCCccHHHHHHHHHHHHHhcceEEEEcCCC
Q 024369 7 SIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGI 55 (268)
Q Consensus 7 ~iPvIDls~l~~~~~d~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi 55 (268)
.||++++.... -.++++.+.+++.+.-.+.|.|||+
T Consensus 122 ~ip~~~y~~~g-------------~~~la~~i~~~l~~~~avll~nHG~ 157 (215)
T 1e4c_P 122 SIPCAPYATFG-------------TRELSEHVALALKNRKATLLQHHGL 157 (215)
T ss_dssp CBCEECCCCTT-------------CHHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CcceeeCCCCC-------------cHHHHHHHHHHhccCCEEEEcCCCc
Confidence 57888876542 1478889999998888888899996
No 19
>3r1j_A Alpha-ketoglutarate-dependent taurine dioxygenase; ssgcid, oxidoreductase, structural genomics; 2.05A {Mycobacterium avium} SCOP: b.82.2.0 PDB: 3swt_A
Probab=47.44 E-value=17 Score=30.46 Aligned_cols=39 Identities=10% Similarity=0.143 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHhcceEEEEcC-CCCHHHHHHHHHHHHHhcCC
Q 024369 32 SQVVKQLDKACKEAGFFYVKGH-GIPESLINDVKNITQKFFDL 73 (268)
Q Consensus 32 ~~~~~~l~~A~~~~GFf~l~nh-Gi~~~~~~~~~~~~~~fF~l 73 (268)
.+..++|++|+.++|.+.+.+- .++.+ +..+.++.|=.+
T Consensus 33 d~~~~~l~~al~~~gvv~fR~q~~l~~~---~~~~fa~~fG~l 72 (301)
T 3r1j_A 33 DATVEQIRRALLTHKVIFFRHQHHLDDS---RQLEFARLLGTP 72 (301)
T ss_dssp HHHHHHHHHHHHHHSEEEECCCTTCCHH---HHHHHHHHHSCB
T ss_pred HHHHHHHHHHHHHCCEEEECCCCCCCHH---HHHHHHHhcCCc
Confidence 4678999999999999999998 78775 444556666443
No 20
>1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1
Probab=46.35 E-value=13 Score=30.06 Aligned_cols=48 Identities=6% Similarity=0.073 Sum_probs=33.1
Q ss_pred CCcEEeCCCCcccCCCCCCCCCccHHHHHHHHHHHHHhcceEEEEcCCCCH--HHHHHHHHHH
Q 024369 7 SIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPE--SLINDVKNIT 67 (268)
Q Consensus 7 ~iPvIDls~l~~~~~d~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~--~~~~~~~~~~ 67 (268)
.||++++.... ..++++++.+++++.-.+.+.|||+=. +.+++++..+
T Consensus 161 ~v~~~~y~~~g-------------~~ela~~i~~~l~~~~avll~nHG~~~~G~~~~eA~~~~ 210 (238)
T 1pvt_A 161 GISVVEFEKPG-------------SVELGLKTVEKSEGKDAVLWDKHGVVAFGKDVAEAYDRV 210 (238)
T ss_dssp CCEEECCCSTT-------------CHHHHHHHHHHTSSCSEEEETTSCEEEEESSHHHHHHHH
T ss_pred CceEecCCCCC-------------cHHHHHHHHHHhccCCEEEEcCCCceEecCCHHHHHHHH
Confidence 68888886532 257888899999888888899999732 2344444433
No 21
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=44.49 E-value=27 Score=20.94 Aligned_cols=25 Identities=8% Similarity=0.163 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHHHHhCCCccccc
Q 024369 151 LCTDLSRKIMRGIALALGGSPFEFE 175 (268)
Q Consensus 151 ~~~~l~~~Ll~~la~~Lgl~~~~f~ 175 (268)
.-.+|+..|.+++++.||.|++++.
T Consensus 18 ~k~~l~~~l~~~l~~~lg~p~~~v~ 42 (63)
T 2x4k_A 18 QLKNLVSEVTDAVEKTTGANRQAIH 42 (63)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGGCE
T ss_pred HHHHHHHHHHHHHHHHhCcCcccEE
Confidence 4567888999999999999987543
No 22
>2v9l_A Rhamnulose-1-phosphate aldolase; entropy index, metal-binding, oligomerization, zinc, lyase, class II, cytoplasm; HET: PGO; 1.23A {Escherichia coli} PDB: 2uyv_A* 1ojr_A 2v9g_A* 1gt7_A* 2v9n_A* 2uyu_A* 2v9m_A* 2v9o_A 2v9e_A 2v9f_A 2v9i_A 2v29_A 2v2a_A* 2v2b_A
Probab=41.84 E-value=13 Score=30.89 Aligned_cols=48 Identities=6% Similarity=0.073 Sum_probs=32.9
Q ss_pred CCcEEeCCCCcccCCCCCCCCCccHHHHHHHHHHHHHhcceEEEEcCCCCH--HHHHHHHHHH
Q 024369 7 SIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPE--SLINDVKNIT 67 (268)
Q Consensus 7 ~iPvIDls~l~~~~~d~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~--~~~~~~~~~~ 67 (268)
.||++++.... ..++++.+.+++++.-.+.+.|||+-. +.+++++..+
T Consensus 179 ~v~v~~y~~~g-------------~~ela~~i~~~l~~~~avll~nHG~~~~G~~~~eA~~~~ 228 (274)
T 2v9l_A 179 GVGILPWMVPG-------------TDAIGQATAQEMQKHSLVLWPFHGVFGSGPTLDETFGLI 228 (274)
T ss_dssp CEEECCCCCSS-------------SHHHHHHHHHHHTTCSEEEETTTEEEEEESSHHHHHHHH
T ss_pred ceeEecCCCCC-------------CHHHHHHHHHHHccCCEEEEcCCCceEecCCHHHHHHHH
Confidence 57888775432 257889999999988889999999732 2344444433
No 23
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=40.95 E-value=47 Score=26.21 Aligned_cols=23 Identities=0% Similarity=-0.034 Sum_probs=16.2
Q ss_pred eEEEEcCCCCHHHHHHHHHHHHH
Q 024369 47 FFYVKGHGIPESLINDVKNITQK 69 (268)
Q Consensus 47 Ff~l~nhGi~~~~~~~~~~~~~~ 69 (268)
++++...=++++.++.+.+.++.
T Consensus 21 ~i~~~~~fLs~~Ec~~li~~~~~ 43 (224)
T 2jig_A 21 RAFLLKNFLSDEECDYIVEKARP 43 (224)
T ss_dssp TEEEETTCSCHHHHHHHHHHHGG
T ss_pred CEEEEcccCCHHHHHHHHHHhhc
Confidence 34455555788889998888764
No 24
>1v7z_A Creatininase, creatinine amidohydrolase; Mn-activated creatininase, substrate complex; 1.60A {Pseudomonas SP} SCOP: c.125.1.1 PDB: 1j2u_A 1j2t_A 3a6d_A 3a6j_A 3a6k_A 3a6l_A 3a6g_A 3a6f_A 3a6e_A 3a6h_A 1q3k_A
Probab=40.22 E-value=21 Score=29.23 Aligned_cols=36 Identities=14% Similarity=0.230 Sum_probs=26.7
Q ss_pred cHHHHHHHHHHHHHhcc---eEEEEcCCCCHHHHHHHHH
Q 024369 30 GVSQVVKQLDKACKEAG---FFYVKGHGIPESLINDVKN 65 (268)
Q Consensus 30 ~~~~~~~~l~~A~~~~G---Ff~l~nhGi~~~~~~~~~~ 65 (268)
.-.++...|.+.+.++| ++.|.+||=....++.+.+
T Consensus 94 tl~~~l~di~~sl~~~GfrrivivNgHGGN~~~l~~a~~ 132 (260)
T 1v7z_A 94 TLTGTVQDIIRELARHGARRLVLMNGHYENSMFIVEGID 132 (260)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEEEECSGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEEcCCCCcHHHHHHHHH
Confidence 34578888999999999 5666789876666666554
No 25
>4hti_A Receptor-type tyrosine-protein phosphatase N2; phogrin, IA-2BETA, protein-tyrosine phosphatase, transmembra protein, diabetes, autoimmunity; 1.95A {Homo sapiens} PDB: 4htj_A
Probab=38.67 E-value=29 Score=24.02 Aligned_cols=35 Identities=14% Similarity=0.203 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHhCCCccccccccccCccccEEEec
Q 024369 156 SRKIMRGIALALGGSPFEFEGVRAGDAFWVLRIIG 190 (268)
Q Consensus 156 ~~~Ll~~la~~Lgl~~~~f~~~~~~~~~s~lr~~~ 190 (268)
+.+|++.+|+.|+++.++|.+.-...+.-++|+..
T Consensus 26 G~~l~~~la~~l~l~~~~F~~isV~g~aVTFrV~~ 60 (99)
T 4hti_A 26 GRRLVEDVARLLQVPSSAFADVEVLGPAVTFKVSA 60 (99)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEEEETTEEEEEECC
T ss_pred HHHHHHHHHHHhCCchhheeeeeecCceEEEEecc
Confidence 67889999999999998887653334545666643
No 26
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=38.08 E-value=37 Score=20.49 Aligned_cols=25 Identities=20% Similarity=0.153 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHHHHhCCCccccc
Q 024369 151 LCTDLSRKIMRGIALALGGSPFEFE 175 (268)
Q Consensus 151 ~~~~l~~~Ll~~la~~Lgl~~~~f~ 175 (268)
.-.+|...|.+++++.||.+++++.
T Consensus 16 qk~~l~~~lt~~l~~~lg~~~~~v~ 40 (64)
T 3abf_A 16 KKRELVRRLTEMASRLLGEPYEEVR 40 (64)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGEE
T ss_pred HHHHHHHHHHHHHHHHhCCCcccEE
Confidence 3457888899999999999987543
No 27
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=37.10 E-value=11 Score=30.71 Aligned_cols=17 Identities=18% Similarity=-0.003 Sum_probs=13.1
Q ss_pred eEEcCC-CcEEEEecchh
Q 024369 226 WEHMLC-IISFFLYLFIY 242 (268)
Q Consensus 226 W~~V~p-pg~~vVnvGD~ 242 (268)
=..|+| .|++||.-.++
T Consensus 157 ~~~V~P~~G~~v~F~s~~ 174 (243)
T 3dkq_A 157 QQSIKLSAGSLVLYPSSS 174 (243)
T ss_dssp EEEECCCTTCEEEEETTS
T ss_pred cEEEecCCCEEEEECCCC
Confidence 367999 99999976543
No 28
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=36.18 E-value=43 Score=19.93 Aligned_cols=24 Identities=17% Similarity=0.195 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHHHHhCCCcccc
Q 024369 151 LCTDLSRKIMRGIALALGGSPFEF 174 (268)
Q Consensus 151 ~~~~l~~~Ll~~la~~Lgl~~~~f 174 (268)
.-.+|+..|.+++++.||++++..
T Consensus 15 qk~~l~~~i~~~l~~~lg~~~~~v 38 (61)
T 2opa_A 15 QKRNLVEKVTEAVKETTGASEEKI 38 (61)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGGC
T ss_pred HHHHHHHHHHHHHHHHhCcCcCeE
Confidence 446788899999999999997643
No 29
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=35.68 E-value=44 Score=19.92 Aligned_cols=23 Identities=17% Similarity=0.128 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHHHHHhCCCccc
Q 024369 151 LCTDLSRKIMRGIALALGGSPFE 173 (268)
Q Consensus 151 ~~~~l~~~Ll~~la~~Lgl~~~~ 173 (268)
.-.+|+..|.+++.+.||++++.
T Consensus 15 ~k~~l~~~i~~~l~~~lg~p~~~ 37 (62)
T 1otf_A 15 QKETLIRQVSEAMANSLDAPLER 37 (62)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGG
T ss_pred HHHHHHHHHHHHHHHHhCcCccc
Confidence 44678889999999999999764
No 30
>2irp_A Putative aldolase class 2 protein AQ_1979; aldehyde, enzymatic mechanism; 2.40A {Aquifex aeolicus}
Probab=35.00 E-value=23 Score=27.85 Aligned_cols=25 Identities=24% Similarity=0.587 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHhcc---eEEEEcCCC
Q 024369 31 VSQVVKQLDKACKEAG---FFYVKGHGI 55 (268)
Q Consensus 31 ~~~~~~~l~~A~~~~G---Ff~l~nhGi 55 (268)
.+++++.+.+++.+.+ .+.|.|||+
T Consensus 149 ~~~La~~i~~~l~~~~~~~avll~nHG~ 176 (208)
T 2irp_A 149 IPLLAKEVENYFKTSEDKYGFLIRGHGL 176 (208)
T ss_dssp HHHHHHHHHHHHHHCSCCSCEEETTTEE
T ss_pred HHHHHHHHHHHHhcCCCceEEEEcCCCC
Confidence 3578899999998765 788889996
No 31
>2da7_A Zinc finger homeobox protein 1B; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=34.34 E-value=14 Score=23.94 Aligned_cols=39 Identities=10% Similarity=0.139 Sum_probs=32.9
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccc
Q 024369 138 PPNFRALMEEYVNLCTDLSRKIMRGIALALGGSPFEFEG 176 (268)
Q Consensus 138 ~~~fr~~~~~y~~~~~~l~~~Ll~~la~~Lgl~~~~f~~ 176 (268)
+..-+.++++|+..-.+-...-+..||..+||+.+...-
T Consensus 13 ~k~ql~~Lk~yF~~n~~Ps~eei~~LA~~lgL~~~VVrV 51 (71)
T 2da7_A 13 YKDHMSVLKAYYAMNMEPNSDELLKISIAVGLPQEFVKE 51 (71)
T ss_dssp STHHHHHHHHHHHHCSSCCHHHHHHHHHHHTCCHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCHHHHHH
Confidence 356688999999999988888999999999999875443
No 32
>3ocr_A Class II aldolase/adducin domain protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, lyase; 1.95A {Pseudomonas syringae PV}
Probab=33.92 E-value=23 Score=29.29 Aligned_cols=38 Identities=8% Similarity=0.128 Sum_probs=29.2
Q ss_pred CCCcEEeCCCCcccCCCCCCCCCccHHHHHHHHHHHHHhcceEEEEcCCC
Q 024369 6 KSIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGI 55 (268)
Q Consensus 6 ~~iPvIDls~l~~~~~d~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi 55 (268)
..||++++..+.. ..++++.|.+++.+.-.+.|.|||+
T Consensus 155 g~v~~~~y~~~~~------------~~el~~~i~~~l~~~~avlL~nHG~ 192 (273)
T 3ocr_A 155 GRVAYHGYEGIAL------------DLSERERLVADLGDKSVMILRNHGL 192 (273)
T ss_dssp TTEEEECCCCSSC------------CHHHHHHHHHHHTTCSEEEETTTEE
T ss_pred CCEEEECCCCCCC------------CHHHHHHHHHHhCcCCEEEEcCCce
Confidence 3588888776421 1467888999999888999999996
No 33
>3no4_A Creatininase, creatinine amidohydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.00A {Nostoc punctiforme pcc 73102}
Probab=32.74 E-value=54 Score=27.00 Aligned_cols=38 Identities=26% Similarity=0.447 Sum_probs=27.2
Q ss_pred cHHHHHHHHHHHHHhcce---EEEEcCCCCHHHHHHHHHHH
Q 024369 30 GVSQVVKQLDKACKEAGF---FYVKGHGIPESLINDVKNIT 67 (268)
Q Consensus 30 ~~~~~~~~l~~A~~~~GF---f~l~nhGi~~~~~~~~~~~~ 67 (268)
.-..+...|.+.+.++|| +.|.+||=....++.+.+..
T Consensus 103 t~~~~l~di~~sl~~~G~~~iv~vNgHGGN~~~l~~a~~el 143 (267)
T 3no4_A 103 TLIQVVRDYVTCLAKAGFSKFYFINGHGGNIATLKAAFSET 143 (267)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEEEECCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEEECCcCcHHHHHHHHHHH
Confidence 345678888889999997 55567997766666665543
No 34
>3jsy_A Acidic ribosomal protein P0 homolog; ribonucleoprotein; 1.60A {Methanocaldococcus jannaschii}
Probab=30.37 E-value=90 Score=24.64 Aligned_cols=40 Identities=13% Similarity=0.191 Sum_probs=32.1
Q ss_pred cHHHHHHHHHHHHHhcceEEEEc-CCCCHHHHHHHHHHHHH
Q 024369 30 GVSQVVKQLDKACKEAGFFYVKG-HGIPESLINDVKNITQK 69 (268)
Q Consensus 30 ~~~~~~~~l~~A~~~~GFf~l~n-hGi~~~~~~~~~~~~~~ 69 (268)
..++.+++|.+.+.++..++|++ +|++.+.++++.+..+.
T Consensus 4 ~K~~~v~el~e~l~~~~~v~v~~~~gl~~~ql~~lR~~lr~ 44 (213)
T 3jsy_A 4 WKIEEVKTLKGLIKSKPVVAIVDMMDVPAPQLQEIRDKIRD 44 (213)
T ss_dssp HHHHHHHHHHHHHHHSSEEEEEECCSCCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhCCEEEEEEcCCCCHHHHHHHHHHHhC
Confidence 45678899999999998888875 68998888888776653
No 35
>3ry0_A Putative tautomerase; oxalocrotonate tautomerase family, isomerase; 1.40A {Streptomyces achromogenes}
Probab=29.44 E-value=64 Score=19.66 Aligned_cols=24 Identities=13% Similarity=0.065 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHHHhCCCcccc
Q 024369 151 LCTDLSRKIMRGIALALGGSPFEF 174 (268)
Q Consensus 151 ~~~~l~~~Ll~~la~~Lgl~~~~f 174 (268)
.-.+|+..|.+++.+.||+|++..
T Consensus 15 qk~~L~~~it~~~~~~lg~p~~~v 38 (65)
T 3ry0_A 15 EVAALGEALTAAAHETLGTPVEAV 38 (65)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGGC
T ss_pred HHHHHHHHHHHHHHHHhCcCcccE
Confidence 456888899999999999997643
No 36
>1zav_A 50S ribosomal protein L10; ribosome structure and function, L10-L12 complex structure, L10E structure, L7/12 ribosomal stalk; 1.90A {Thermotoga maritima} SCOP: d.58.62.1 PDB: 1zaw_A 1zax_A
Probab=29.33 E-value=1.1e+02 Score=23.37 Aligned_cols=40 Identities=10% Similarity=0.250 Sum_probs=32.3
Q ss_pred cHHHHHHHHHHHHHhcceEEEEc-CCCCHHHHHHHHHHHHH
Q 024369 30 GVSQVVKQLDKACKEAGFFYVKG-HGIPESLINDVKNITQK 69 (268)
Q Consensus 30 ~~~~~~~~l~~A~~~~GFf~l~n-hGi~~~~~~~~~~~~~~ 69 (268)
...+.+++|.+.+++...+++.+ +|++.+.+.++.+..+.
T Consensus 7 ~K~~~v~el~~~l~~~~~v~v~~~~gltv~q~~~LR~~lr~ 47 (180)
T 1zav_A 7 QKELIVKEMSEIFKKTSLILFADFLGFTVADLTELRSRLRE 47 (180)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCEEEEEEeCCCCHHHHHHHHHHHHh
Confidence 35678899999999999888886 59999888877776654
No 37
>2j01_J 50S ribosomal protein L10; ribosome, tRNA, paromomycin, mRNA, translation; 2.8A {Thermus thermophilus} PDB: 2j03_J 3d5b_J 3d5d_J 3i8i_Y 3kir_J 3kit_J 3kiw_J 3kiy_J 3mrz_I 3ms1_I 3pyt_I 3pyr_I 3pyo_I 3pyv_I
Probab=29.15 E-value=1.1e+02 Score=23.14 Aligned_cols=39 Identities=13% Similarity=0.325 Sum_probs=30.5
Q ss_pred cHHHHHHHHHHHHHhcc-eEEEEc-CCCCHHHHHHHHHHHH
Q 024369 30 GVSQVVKQLDKACKEAG-FFYVKG-HGIPESLINDVKNITQ 68 (268)
Q Consensus 30 ~~~~~~~~l~~A~~~~G-Ff~l~n-hGi~~~~~~~~~~~~~ 68 (268)
...+.+++|.+.+++.. .++|.+ +|++.+.+.++.+..+
T Consensus 5 ~K~~~v~el~~~l~~~~~~v~v~~~~gltv~~~~~LR~~lr 45 (173)
T 2j01_J 5 RNVELLATLKENLERAQGSFFLVNYQGLPAKETHALRQALK 45 (173)
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEEcCCCCHHHHHHHHHHHH
Confidence 45678899999999988 777665 6999887777776655
No 38
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=27.70 E-value=36 Score=27.57 Aligned_cols=39 Identities=8% Similarity=0.234 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHHHhc
Q 024369 33 QVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFF 71 (268)
Q Consensus 33 ~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF 71 (268)
+..++|.++|++.+.++--|-.+...++.++.+.+.++|
T Consensus 89 e~~~~l~~aa~~~~v~~a~N~S~Gv~l~~~~~~~aa~~l 127 (243)
T 3qy9_A 89 KLLNKLDELSQNMPVFFSANMSYGVHALTKILAAAVPLL 127 (243)
T ss_dssp HHHHHHHHHTTTSEEEECSSCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCEEEECCccHHHHHHHHHHHHHHHhc
Confidence 456788888888888888888887777777777766666
No 39
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=27.61 E-value=43 Score=27.94 Aligned_cols=36 Identities=8% Similarity=0.192 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHhcceEEEEc-CCCCHHHHHHHHHHHH
Q 024369 33 QVVKQLDKACKEAGFFYVKG-HGIPESLINDVKNITQ 68 (268)
Q Consensus 33 ~~~~~l~~A~~~~GFf~l~n-hGi~~~~~~~~~~~~~ 68 (268)
+.+......|.+.|.=.|++ .|.+++..+++.++++
T Consensus 99 ~a~~~~~~~~l~~Gv~vViGTTG~~~e~~~~L~~aa~ 135 (288)
T 3ijp_A 99 QASVLYANYAAQKSLIHIIGTTGFSKTEEAQIADFAK 135 (288)
T ss_dssp HHHHHHHHHHHHHTCEEEECCCCCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHhC
Confidence 44555556666677666664 4666666666655554
No 40
>3m20_A 4-oxalocrotonate tautomerase, putative; DMPI, thermophIle, beta-alpha-beta, catalytic proline, isomerase; 2.37A {Archaeoglobus fulgidus}
Probab=27.61 E-value=69 Score=19.36 Aligned_cols=24 Identities=8% Similarity=-0.007 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHHHHhCCCcccc
Q 024369 151 LCTDLSRKIMRGIALALGGSPFEF 174 (268)
Q Consensus 151 ~~~~l~~~Ll~~la~~Lgl~~~~f 174 (268)
.-.+|...|.+++++.||++++..
T Consensus 14 qK~~L~~~it~~~~~~lg~~~~~v 37 (62)
T 3m20_A 14 KKREFVERLTSVAAEIYGMDRSAI 37 (62)
T ss_dssp HHHHHHHHHHHHHHHHHTCCTTSC
T ss_pred HHHHHHHHHHHHHHHHhCcCcceE
Confidence 446788899999999999997643
No 41
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=27.05 E-value=37 Score=28.00 Aligned_cols=36 Identities=11% Similarity=-0.002 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHhcceEEEE-cCCCCHHHHHHHHHHHH
Q 024369 33 QVVKQLDKACKEAGFFYVK-GHGIPESLINDVKNITQ 68 (268)
Q Consensus 33 ~~~~~l~~A~~~~GFf~l~-nhGi~~~~~~~~~~~~~ 68 (268)
+.+..+...|.+.|.=.|+ ..|.+.+..+++.++++
T Consensus 84 ~a~~~~~~~al~~G~~vVigTTG~s~~~~~~L~~aa~ 120 (272)
T 4f3y_A 84 EGTLVHLDAALRHDVKLVIGTTGFSEPQKAQLRAAGE 120 (272)
T ss_dssp HHHHHHHHHHHHHTCEEEECCCCCCHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHhc
Confidence 3445555556666665555 34666665555555544
No 42
>1gyx_A YDCE, B1461, hypothetical protein YDCE; tautomerase, isomerase, complete proteo; HET: EPE; 1.35A {Escherichia coli} SCOP: d.80.1.1 PDB: 1gyj_A* 1gyy_A*
Probab=26.67 E-value=73 Score=20.21 Aligned_cols=24 Identities=17% Similarity=0.051 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHHHHhCCCcccc
Q 024369 151 LCTDLSRKIMRGIALALGGSPFEF 174 (268)
Q Consensus 151 ~~~~l~~~Ll~~la~~Lgl~~~~f 174 (268)
.-.+|+..|.+++++.||++++..
T Consensus 16 qk~~L~~~l~~~l~~~lgip~~~v 39 (76)
T 1gyx_A 16 QKAALAADITDVIIRHLNSKDSSI 39 (76)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGC
T ss_pred HHHHHHHHHHHHHHHHhCcCCceE
Confidence 456888999999999999998744
No 43
>3m21_A Probable tautomerase HP_0924; 4-oxalocrotonate tautomerase, catalytic proline, hexamer, BE beta, isomerase; 1.90A {Helicobacter pylori} PDB: 2orm_A
Probab=26.58 E-value=77 Score=19.45 Aligned_cols=23 Identities=9% Similarity=-0.039 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHHHHhCCCccc
Q 024369 151 LCTDLSRKIMRGIALALGGSPFE 173 (268)
Q Consensus 151 ~~~~l~~~Ll~~la~~Lgl~~~~ 173 (268)
.-.+|...|.+++++.||++++.
T Consensus 18 qK~~l~~~lt~~l~~~lg~p~~~ 40 (67)
T 3m21_A 18 QKQQLIEGVSDLMVKVLNKNKAS 40 (67)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGG
T ss_pred HHHHHHHHHHHHHHHHHCcCccc
Confidence 45678888999999999998764
No 44
>3mb2_A 4-oxalocrotonate tautomerase family enzyme - ALPH; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, hydrolase; 2.41A {Chloroflexus aurantiacus}
Probab=26.26 E-value=76 Score=19.85 Aligned_cols=24 Identities=21% Similarity=0.151 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHHHHhCCCcccc
Q 024369 151 LCTDLSRKIMRGIALALGGSPFEF 174 (268)
Q Consensus 151 ~~~~l~~~Ll~~la~~Lgl~~~~f 174 (268)
.-.+|...|.+++++.||.+++..
T Consensus 16 qK~~L~~~it~~l~~~lg~p~~~v 39 (72)
T 3mb2_A 16 QKAELARALSAAAAAAFDVPLAEV 39 (72)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGE
T ss_pred HHHHHHHHHHHHHHHHhCCCcccE
Confidence 456788899999999999997643
No 45
>2rdq_A 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II ketoglutarate dependent hydroxylase...; double stranded barrel helix, dioxygenase; HET: AKG; 1.31A {Streptomyces avermitilis} PDB: 2rdn_A* 2rdr_A* 2rds_A*
Probab=25.55 E-value=82 Score=25.56 Aligned_cols=36 Identities=17% Similarity=0.380 Sum_probs=29.9
Q ss_pred HHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHHHhc
Q 024369 35 VKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFF 71 (268)
Q Consensus 35 ~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF 71 (268)
.+++.+.+++.||+.|.+- ++.+.++++.+...+++
T Consensus 21 ~~~~~~~f~~dGyvvl~~~-l~~e~v~~l~~~~~~~~ 56 (288)
T 2rdq_A 21 RAALDSFYEEHGYLFLRNV-LDRDLVKTVAEQMREGL 56 (288)
T ss_dssp HHHHHHHHHHHSEEEECSC-SCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCEEEEeCC-CCHHHHHHHHHHHHHHH
Confidence 3567889999999999875 88899999988877664
No 46
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=23.25 E-value=44 Score=26.48 Aligned_cols=57 Identities=11% Similarity=-0.116 Sum_probs=35.9
Q ss_pred EEEeccCCCCCCCCCCCCCccc-c-cc-----cc--CCc--ceeeec-CCCCeEEcCC-CcEEEEecchhhHhhh
Q 024369 186 LRIIGYPGLSGAKDQKKPENNI-G-WY-----CN--NTE--VDVFFL-AYDNWEHMLC-IISFFLYLFIYLFLWS 247 (268)
Q Consensus 186 lr~~~YPp~~~~~~g~~~HtD~-g-~l-----T~--~~g--lqv~~~-~~~~W~~V~p-pg~~vVnvGD~l~~~S 247 (268)
.-+|+|.+-. +++.|.|- . .+ ++ ... ..+... .++..+.|.- +|+++|.-|++ +.|-
T Consensus 107 ~LvN~Y~~G~----~i~~H~D~~e~~~~~pI~svSLG~~~~f~f~~~~~~~~~~~i~L~~GsllvM~G~~-r~~~ 176 (211)
T 3i3q_A 107 CLINRYAPGA----KLSLHQDKDEPDLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGES-RLFY 176 (211)
T ss_dssp EEEEEECTTC----CEEEECCCCCSCTTSCEEEEEEESCEEEEECCSSTTSCCEEEEECTTCEEEECGGG-TTCC
T ss_pred EEEEEEcCCC----CcccccCCCccccCCCEEEEECCCCeEEEEecccCCCceEEEECCCCCEEEECchH-HceE
Confidence 4589998743 68999993 2 12 11 111 122221 2467888998 99999999988 4574
No 47
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=22.17 E-value=94 Score=25.27 Aligned_cols=36 Identities=8% Similarity=0.187 Sum_probs=30.0
Q ss_pred HHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHHHhcC
Q 024369 36 KQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFFD 72 (268)
Q Consensus 36 ~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~ 72 (268)
++.++.+++.||+.|.+- ++.+.++++.+...++++
T Consensus 6 ~e~~~~f~~dGyvvl~~~-l~~e~v~~l~~~~~~~~~ 41 (291)
T 2opw_A 6 PSQLQKFQQDGFLVLEGF-LSAEECVAMQQRIGEIVA 41 (291)
T ss_dssp HHHHHHHHHHSEEEETTS-SCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCEEEecCC-CCHHHHHHHHHHHHHHHh
Confidence 456788999999999875 789999999988888764
No 48
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=21.07 E-value=1.2e+02 Score=24.24 Aligned_cols=32 Identities=16% Similarity=0.223 Sum_probs=19.3
Q ss_pred HHHHHHHHHHhcceEEEEcC-CCCHHHHHHHHH
Q 024369 34 VVKQLDKACKEAGFFYVKGH-GIPESLINDVKN 65 (268)
Q Consensus 34 ~~~~l~~A~~~~GFf~l~nh-Gi~~~~~~~~~~ 65 (268)
.+....+.|.+.|.=.|++. |.+.+..+.+..
T Consensus 65 a~~~~~~~~~~~g~~~ViGTTG~~~~~~~~l~~ 97 (228)
T 1vm6_A 65 ALPKTVDLCKKYRAGLVLGTTALKEEHLQMLRE 97 (228)
T ss_dssp GHHHHHHHHHHHTCEEEECCCSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHH
Confidence 45556666666777777653 676665544443
No 49
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=20.73 E-value=1.6e+02 Score=20.78 Aligned_cols=40 Identities=25% Similarity=0.332 Sum_probs=27.3
Q ss_pred CCCcE-EeCCCCcccCCCCCCCCCccHHHHHHHHHHHHHhcceEEEEcCCCCHH
Q 024369 6 KSIPI-IDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPES 58 (268)
Q Consensus 6 ~~iPv-IDls~l~~~~~d~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~ 58 (268)
...|+ ||++.+.. + . -..+|.+.|+++|+..+--.|...+
T Consensus 46 ~~aPVVlDl~~l~~---~------~----dl~~L~~~l~~~gl~~vGV~g~~~~ 86 (120)
T 3ghf_A 46 KHAPVVINVSGLES---P------V----NWPELHKIVTSTGLRIIGVSGCKDA 86 (120)
T ss_dssp TTCEEEEEEEECCS---S------C----CHHHHHHHHHTTTCEEEEEESCCCH
T ss_pred CCCcEEEEccccCC---h------H----HHHHHHHHHHHcCCEEEEEeCCCcH
Confidence 44565 69988742 0 1 1577889999999999866665544
No 50
>3djh_A Macrophage migration inhibitory factor; homotrimer, cytokine, inflammatory response, isomerase, phosphoprotein; 1.25A {Homo sapiens} SCOP: d.80.1.3 PDB: 1ca7_A* 1ljt_A* 2ooh_A* 2ooz_A* 3b9s_A* 2oow_A* 3ce4_A 3dji_A* 3ijg_A* 3ijj_A* 3smb_A* 3smc_A* 3u18_A* 4f2k_A* 1gd0_A* 1gcz_A* 3jsf_A* 3jsg_A* 3jtu_A* 3l5p_A* ...
Probab=20.47 E-value=1e+02 Score=21.33 Aligned_cols=24 Identities=21% Similarity=0.034 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHHHhCCCcccc
Q 024369 151 LCTDLSRKIMRGIALALGGSPFEF 174 (268)
Q Consensus 151 ~~~~l~~~Ll~~la~~Lgl~~~~f 174 (268)
.-.+++..|.+.+.+.||++++.+
T Consensus 71 ~n~~~s~~i~~~l~~~Lgi~~~ri 94 (114)
T 3djh_A 71 QNRSYSKLLCGLLAERLRISPDRV 94 (114)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGGE
T ss_pred HHHHHHHHHHHHHHHHhCcCcceE
Confidence 456788888999999999998743
No 51
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=20.25 E-value=1.5e+02 Score=23.77 Aligned_cols=38 Identities=5% Similarity=0.113 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHHHh
Q 024369 32 SQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKF 70 (268)
Q Consensus 32 ~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~f 70 (268)
....+.|.+++.+.|++++.|- ++++.++.+.+.++.+
T Consensus 13 ~~~~~~i~~~L~~~g~~Vid~f-Ls~ee~~~L~~~~~~~ 50 (247)
T 2hbt_A 13 KLALEYIVPCMNKHGICVVDDF-LGKETGQQIGDEVRAL 50 (247)
T ss_dssp HHHHHTHHHHHHHTSEEEESSS-SCHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHhccCCEEEECCC-CCHHHHHHHHHHHHhh
Confidence 4456789999999999887655 8999999999887763
No 52
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=20.17 E-value=74 Score=27.22 Aligned_cols=58 Identities=10% Similarity=-0.035 Sum_probs=39.9
Q ss_pred cEEEeccCCCCCCCCCCCCCcccccc------cc-CCc---ceeeecCCCCeEEcCC-CcEEEEecchhhHhhh
Q 024369 185 VLRIIGYPGLSGAKDQKKPENNIGWY------CN-NTE---VDVFFLAYDNWEHMLC-IISFFLYLFIYLFLWS 247 (268)
Q Consensus 185 ~lr~~~YPp~~~~~~g~~~HtD~g~l------T~-~~g---lqv~~~~~~~W~~V~p-pg~~vVnvGD~l~~~S 247 (268)
..-+|+|.+-. ++++|.|--.. ++ +++ +.+.. .++.++.|.- +|+++|.-|++-..|.
T Consensus 199 ~~lvN~Y~~G~----~I~~H~D~~~~~~~~I~slSLG~~~~f~f~~-~~~~~~~l~L~~gsLlvM~G~~r~~w~ 267 (345)
T 3tht_A 199 QMTINQYEPGQ----GIPAHIDTHSAFEDEIVSLSLGSEIVMDFKH-PDGIAVPVMLPRRSLLVMTGESRYLWT 267 (345)
T ss_dssp EEEEEEECTTC----CEEEECCCTTTBCSCEEEEEESSCEEEEEEC-TTSCEEEEEECTTEEEEECTHHHHTSE
T ss_pred EEEEEEecCCC----CEeeccCCchhcCCeEEEEECCCceeEEEcc-CCCceEEEEcCCCcEEEEChHHhhceE
Confidence 35689998732 68999987422 11 111 12222 3577999998 9999999999998884
No 53
>2do1_A Nuclear protein HCC-1; SAP domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.140.2.1
Probab=20.06 E-value=1.1e+02 Score=18.47 Aligned_cols=31 Identities=23% Similarity=0.547 Sum_probs=22.9
Q ss_pred HHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHH
Q 024369 35 VKQLDKACKEAGFFYVKGHGIPESLINDVKNITQ 68 (268)
Q Consensus 35 ~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~ 68 (268)
+.+|.+.|+..| |.-.|.-.++++++.....
T Consensus 15 V~eLK~~L~~rG---L~~~G~KaeLieRL~~~l~ 45 (55)
T 2do1_A 15 LAELKQECLARG---LETKGIKQDLIHRLQAYLE 45 (55)
T ss_dssp HHHHHHHHHHHT---CCCCSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcC---CCCCCcHHHHHHHHHHHHh
Confidence 678888999888 4456777788888866543
Done!