Query 024370
Match_columns 268
No_of_seqs 204 out of 1513
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 07:04:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024370.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024370hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1txo_A Putative bacterial enzy 100.0 4.8E-37 1.6E-41 262.0 16.3 205 55-263 3-229 (237)
2 2pk0_A Serine/threonine protei 100.0 1.7E-36 5.7E-41 260.7 19.0 205 58-263 7-239 (250)
3 2j82_A TPPHA, protein serine-t 100.0 4E-36 1.4E-40 256.6 18.8 202 59-262 3-233 (240)
4 2p8e_A PPM1B beta isoform vari 100.0 2E-36 6.7E-41 268.3 11.8 205 58-263 25-291 (307)
5 2iq1_A Protein phosphatase 2C 100.0 1.3E-35 4.4E-40 259.0 15.7 203 59-263 10-255 (274)
6 2jfr_A Ser-Thr phosphatase MSP 100.0 2.1E-35 7.2E-40 251.4 16.6 200 56-263 5-227 (234)
7 3kdj_B Protein phosphatase 2C 100.0 4.5E-35 1.5E-39 260.6 14.7 203 60-263 12-298 (316)
8 2i0o_A Ser/Thr phosphatase; be 100.0 1.9E-34 6.6E-39 255.1 18.4 197 59-257 25-285 (304)
9 3qn1_B Protein phosphatase 2C 100.0 3.3E-35 1.1E-39 263.6 13.2 201 61-263 18-321 (337)
10 2i44_A Serine-threonine phosph 100.0 8.6E-35 2.9E-39 259.4 14.2 204 57-263 22-314 (324)
11 4da1_A Protein phosphatase 1K, 100.0 2.1E-34 7.3E-39 263.0 17.0 203 59-263 124-369 (389)
12 1a6q_A Phosphatase 2C; catalyt 100.0 1.8E-34 6E-39 262.7 15.9 204 58-263 23-285 (382)
13 3rnr_A Stage II sporulation E 100.0 2.1E-33 7E-38 236.1 10.9 178 82-263 9-205 (211)
14 2irm_A Mitogen-activated prote 100.0 4.1E-33 1.4E-37 251.9 10.5 195 60-256 23-325 (358)
15 2isn_A NYSGXRC-8828Z, phosphat 100.0 5.5E-32 1.9E-36 244.9 16.8 201 58-263 14-326 (364)
16 2j4o_A Mitogen-activated prote 100.0 2.6E-32 8.9E-37 250.0 11.6 190 65-255 42-336 (401)
17 2pnq_A [pyruvate dehydrogenase 100.0 5.3E-32 1.8E-36 251.8 11.5 194 63-256 43-418 (467)
18 3d8k_A PP2C, protein phosphata 100.0 9.2E-32 3.1E-36 244.3 12.2 196 60-263 16-317 (377)
19 3t91_A Stage II sporulation pr 99.9 3.6E-22 1.2E-26 170.4 21.3 187 51-257 4-204 (242)
20 3pu9_A Protein serine/threonin 99.9 3.7E-20 1.2E-24 158.3 22.2 186 52-257 8-208 (242)
21 3zt9_A Serine phosphatase; hyd 99.8 3.3E-18 1.1E-22 141.3 19.0 173 55-253 4-180 (193)
22 3f79_A Probable two-component 99.7 8.1E-17 2.8E-21 138.3 15.3 171 69-250 48-234 (255)
23 3ke6_A Protein RV1364C/MT1410; 99.3 2.1E-10 7.1E-15 104.6 21.3 181 55-255 36-237 (399)
24 3eq2_A Probable two-component 98.9 6.6E-08 2.3E-12 87.4 18.0 158 69-238 187-360 (394)
No 1
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A
Probab=100.00 E-value=4.8e-37 Score=262.05 Aligned_cols=205 Identities=20% Similarity=0.213 Sum_probs=158.6
Q ss_pred eeeeeEEecCCCCCCCCCCceEEEeecCCeEEEEecCCCchhhccccHHHHHHHHHHHHhhhhhh-------ccCcccHH
Q 024370 55 FCVGTHLIPHPNKVERGGEDAFFVSCYNGGVIAVADGVSGWAEQNVDPSLFSRELMANASYFVED-------VEVNYDPQ 127 (268)
Q Consensus 55 ~~~~~~~~s~~G~~r~~neDa~~v~~~~~~~~~VaDG~Gg~~~~~~as~~~~~~l~~~~~~~~~~-------~~~~~~~~ 127 (268)
+.+.++..+++|+.|+.|||++++.. .+|+|||||||+..+++||+.+.+.+.+........ ..+...+.
T Consensus 3 ~~~~~~~~s~~G~~r~~nED~~~~~~---~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~l~~a~~~~~~ 79 (237)
T 1txo_A 3 LVLRYAARSDRGLVRANNEDSVYAGA---RLLALADGMGGHAAGEVASQLVIAALAHLDDDEPGGDLLAKLDAAVRAGNS 79 (237)
T ss_dssp CEEEEEEEEECCSSCSSCCEEEEECS---SEEEEEEEECTTTHHHHHHHHHHHHHGGGGSSCCCSCHHHHHHHHHHHHHH
T ss_pred eEEEEEEecCCCCCCCcCCCccccCC---CEEEEEeCCCCcHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHH
Confidence 34556667889988999999998743 799999999999999999999888776543211000 11222233
Q ss_pred HHHHHHHhccCCCCccceEEEEEeeCCeEEEEEecCCeeEEEECCeeEEeCcccccc--------------CCCCcc-cc
Q 024370 128 ILMRKAHAATSSVGSATVIVAMLERNGILKVASVGDCGLRIIRKGQITFSSSPQEHY--------------FDCPYQ-LS 192 (268)
Q Consensus 128 ~l~~~a~~~~~~~~~gtt~~~~l~~~~~l~ia~vGDsr~~l~r~g~~~~lt~dh~~~--------------~~~p~~-l~ 192 (268)
.+.+.........++|||++++++.+++++++|+||||+|++|+|++.+||.||... ..+|.+ ..
T Consensus 80 ~i~~~~~~~~~~~~~gtT~~~~~i~~~~l~~a~vGDsr~~l~r~g~~~~lt~dh~~~~~~~~~G~i~~~~~~~~~~~~~~ 159 (237)
T 1txo_A 80 AIAAQVEMEPDLEGMGTTLTAILFAGNRLGLVHIGDSRGYLLRDGELTQITKDDTFVQTLVDEGRITPEEAHSHPQRSLI 159 (237)
T ss_dssp HHHHHHHHCGGGTTCEECEEEEEEETTEEEEEEESSCEEEEEETTEEEECSCCCBHHHHHHHTTSSCTTGGGGCTTTTCB
T ss_pred HHHHHHhhCCCCCCCcceEEEEEEECCEEEEEEEccCcEEEEeCCEeEEeCCCCCHHHHHHHcCCCCHHHHhhCccccce
Confidence 333333333334678999999999999999999999999999999999999999632 123433 22
Q ss_pred ccccCCccccceEEEEEcCCCCEEEEecCCCCCCCChHHHHHHhhcCCCHHHHHHHHHHHHHhcchhhhhh
Q 024370 193 SEAVGQTYLDAMVTTVELIEGDTIVMGSDGLFDNVFDHEVVSMTTRFIDVSEAGICSVFGSIYQKIIYSVA 263 (268)
Q Consensus 193 ~~~~g~~~~~~~~~~~~l~~gD~liL~SDGl~d~l~~~ei~~~v~~~~~~~~~a~~Lv~~A~~~~~~~~~~ 263 (268)
.+.+|+...+|++..+++++||+||||||||||+++++++.+++.+. +++++|+.|++.|+.+...++++
T Consensus 160 tr~lg~~~~~p~~~~~~l~~~d~lvl~SDGl~d~l~~~~i~~~~~~~-~~~~~a~~L~~~a~~~g~~DniT 229 (237)
T 1txo_A 160 MRALTGHEVEPTLTMREARAGDRYLLCSDGLSDPVSDETILEALQIP-EVAESAHRLIELALRGGGPDNVT 229 (237)
T ss_dssp CCCBSSSCCCCEEEEEECCTTCEEEEECHHHHTTSCHHHHHHHHTSS-SHHHHHHHHHHHHHHTTCCSCEE
T ss_pred eeccCCCCccceEEEEecCCCCEEEEECCCCCCCCCHHHHHHHHhcC-CHHHHHHHHHHHHHHcCCCCCeE
Confidence 34456677889999999999999999999999999999999999764 89999999999999887665543
No 2
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae}
Probab=100.00 E-value=1.7e-36 Score=260.67 Aligned_cols=205 Identities=17% Similarity=0.168 Sum_probs=160.8
Q ss_pred eeEEecCCCCCCCCCCceEEEeecC--CeEEEEecCCCchhhccccHHHHHHHHH-HHHhhhh--h-------hccCccc
Q 024370 58 GTHLIPHPNKVERGGEDAFFVSCYN--GGVIAVADGVSGWAEQNVDPSLFSRELM-ANASYFV--E-------DVEVNYD 125 (268)
Q Consensus 58 ~~~~~s~~G~~r~~neDa~~v~~~~--~~~~~VaDG~Gg~~~~~~as~~~~~~l~-~~~~~~~--~-------~~~~~~~ 125 (268)
.++..+++|+.|+.|||++++.... ..+|+|||||||+..+++||+.+++.+. ++....+ . ...+...
T Consensus 7 ~~~~~s~~G~~r~~neD~~~~~~~~~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~ 86 (250)
T 2pk0_A 7 EISLLTDIGQRRSNNQDFINQFENKAGVPLIILADGMGGHRAGNIASEMTVTDLGSDWAETDFSELSEIRDWMLVSIETE 86 (250)
T ss_dssp EEEEEEECCTTCSCCCEEEEEEECTTCCEEEEEEEEECTTTHHHHHHHHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHH
T ss_pred EEEEecCCCCCCCcCCCceEeccCCCCcEEEEEEeCCCCcHHHHHHHHHHHHHHHHHHhhcccCChhhHHHHHHHHHHHH
Confidence 4555788998899999999987643 5699999999999999999999999887 4332211 0 0122223
Q ss_pred HHHHHHHHHhccCCCCccceEEEEEeeCCeEEEEEecCCeeEEEECCeeEEeCcccccc--------------CCCCcc-
Q 024370 126 PQILMRKAHAATSSVGSATVIVAMLERNGILKVASVGDCGLRIIRKGQITFSSSPQEHY--------------FDCPYQ- 190 (268)
Q Consensus 126 ~~~l~~~a~~~~~~~~~gtt~~~~l~~~~~l~ia~vGDsr~~l~r~g~~~~lt~dh~~~--------------~~~p~~- 190 (268)
+..+.+...... ..++|||++++++.+++++++|+||||+|++|+|++.+||.||... ..+|.+
T Consensus 87 ~~~l~~~~~~~~-~~~~gtT~~~~~i~~~~l~~anvGDsr~~l~r~g~~~~lt~dh~~~~~~~~~g~i~~~~~~~~~~~~ 165 (250)
T 2pk0_A 87 NRKIYELGQSDD-YKGMGTTIEAVAIVGDNIIFAHVGDSRIGIVRQGEYHLLTSDHSLVNELVKAGQLTEEEAASHPQKN 165 (250)
T ss_dssp HHHHHHHHHHTT-CTTCEECEEEEEEETTEEEEEEESSCEEEEEETTEEEECCCCCBHHHHHHHTTSSCHHHHHTCCSCC
T ss_pred HHHHHHHHhhCC-CCCCcceEEEEEEECCeEEEEEeCCCeEEEEcCCcEEEeCCCCCHHHHHHHcCCCCHHHHHhCCCcc
Confidence 333333333322 5678999999999999999999999999999999999999999641 135554
Q ss_pred -ccccccCCccccceEEEEEcCCCCEEEEecCCCCCCCChHHHHHHhhcCCCHHHHHHHHHHHHHhcchhhhhh
Q 024370 191 -LSSEAVGQTYLDAMVTTVELIEGDTIVMGSDGLFDNVFDHEVVSMTTRFIDVSEAGICSVFGSIYQKIIYSVA 263 (268)
Q Consensus 191 -l~~~~~g~~~~~~~~~~~~l~~gD~liL~SDGl~d~l~~~ei~~~v~~~~~~~~~a~~Lv~~A~~~~~~~~~~ 263 (268)
+++..+.....+|++..+++++||+||||||||||+++++++.+++.+..+++++|+.|++.|+.+...++++
T Consensus 166 ~ltralG~~~~~~p~~~~~~l~~gd~lll~SDGl~d~l~~~~i~~~~~~~~~~~~~a~~L~~~a~~~g~~DniT 239 (250)
T 2pk0_A 166 IITQSIGQANPVEPDLGVHLLEEGDYLVVNSDGLTNMLSNADIATVLTQEKTLDDKNQDLITLANHRGGLDNIT 239 (250)
T ss_dssp CBSCCBSCSSCCCCEEEEEECCTTCEEEEECHHHHTTSCHHHHHHHHTSSSCHHHHHHHHHHHHHHTTCCSCEE
T ss_pred eEEeecCCCCCccceEEEEEcCCCCEEEEECCCCCCCcCHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCCCeE
Confidence 4444443356789999999999999999999999999999999999887799999999999999876655543
No 3
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A
Probab=100.00 E-value=4e-36 Score=256.63 Aligned_cols=202 Identities=18% Similarity=0.176 Sum_probs=152.9
Q ss_pred eEEecCCCCCCCCCCceEEEeecCCe-EEEEecCCCchhhccccHHHHHHHHHHHHhhhhh--h--------ccCcccHH
Q 024370 59 THLIPHPNKVERGGEDAFFVSCYNGG-VIAVADGVSGWAEQNVDPSLFSRELMANASYFVE--D--------VEVNYDPQ 127 (268)
Q Consensus 59 ~~~~s~~G~~r~~neDa~~v~~~~~~-~~~VaDG~Gg~~~~~~as~~~~~~l~~~~~~~~~--~--------~~~~~~~~ 127 (268)
++..+++|+.|+.|||++ +...+.+ +|+|||||||+..++++|+.+++.+.+.+..... . ..+...+.
T Consensus 3 ~~~~s~~G~~r~~neD~~-~~~~~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 81 (240)
T 2j82_A 3 VAGLTDCGLIRKSNQDAF-YIDEKHQRFFIVADGMGGHAGGEEASRLAVDHIRQYLETHLEDLQHDPVTLLRQAFLAANH 81 (240)
T ss_dssp EEEEEECCSSCSSCCEEE-EECTTTCCEEEEEEBC---CHHHHHHHHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHHHH
T ss_pred EEEeCCCCCCCCcCCCcc-EecCCCCeEEEEEcCCCCchHHHHHHHHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHH
Confidence 456788999899999999 7665445 9999999999999999999999988876554321 0 11122222
Q ss_pred HHHHHHHhccCCCCccceEEEEEee--CCeEEEEEecCCeeEEEECCeeEEeCcccccc--------------CCCCcc-
Q 024370 128 ILMRKAHAATSSVGSATVIVAMLER--NGILKVASVGDCGLRIIRKGQITFSSSPQEHY--------------FDCPYQ- 190 (268)
Q Consensus 128 ~l~~~a~~~~~~~~~gtt~~~~l~~--~~~l~ia~vGDsr~~l~r~g~~~~lt~dh~~~--------------~~~p~~- 190 (268)
.+.+.........++|||++++++. +++++++|+||||+|++|+|++.+||.||... ..+|.+
T Consensus 82 ~l~~~~~~~~~~~~~gtT~~~~~i~~~~~~l~~anvGDsr~~l~r~~~~~~lt~dh~~~~~~~~~g~i~~~~~~~~~~~~ 161 (240)
T 2j82_A 82 AIVEQQRQNSARADMGTTAVVILLDEKGDRAWCAHVGDSRIYRWRKDQLQQITSDHTWIAQAVQLGSLTIEQARQHPWRH 161 (240)
T ss_dssp HHHHHHTTSCSCTTCCBCEEEEEECTTSSEEEEEEESSCEEEEEETTEEEECSCCCBHHHHC----------------CC
T ss_pred HHHHHhhcccCCCCCCceEEEEEEEecCCEEEEEEEccCceEEEeCCEEEEECCCCcHHHHHHHcCCCCHHHHhcCCCcC
Confidence 3333322222446789999999998 99999999999999999999999999999641 234544
Q ss_pred -ccccccCCccccceEEEEEcCCCCEEEEecCCCCCCCChHHHHHHhhcCCCHHHHHHHHHHHHHhcchhhhh
Q 024370 191 -LSSEAVGQTYLDAMVTTVELIEGDTIVMGSDGLFDNVFDHEVVSMTTRFIDVSEAGICSVFGSIYQKIIYSV 262 (268)
Q Consensus 191 -l~~~~~g~~~~~~~~~~~~l~~gD~liL~SDGl~d~l~~~ei~~~v~~~~~~~~~a~~Lv~~A~~~~~~~~~ 262 (268)
+++..+.....+|++..+++++||+||||||||||+++++++.+++. ..+++++++.|++.|+.....+++
T Consensus 162 ~ltralG~~~~~~p~~~~~~l~~gd~lll~SDGl~d~l~~~~i~~~l~-~~~~~~~a~~l~~~a~~~g~~Dni 233 (240)
T 2j82_A 162 VLSQCLGREDLSQIDIQPIDLEPGDRLLLCSDGLTEELTDDVISIYLS-EPNVQKAAAALVDAAKTHGGRDNV 233 (240)
T ss_dssp CBSCCBSCTTCCCCEEEEEECCTTCEEEEECHHHHTTSCHHHHHHHHT-CSSHHHHHHHHHHHHHHTTCCSCE
T ss_pred eEeecCCCCCceeEEEEEEeeCCCCEEEEECCCCCCCCCHHHHHHHHc-cCCHHHHHHHHHHHHHHcCCCCCe
Confidence 44444433567899999999999999999999999999999999998 668999999999999987655544
No 4
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens}
Probab=100.00 E-value=2e-36 Score=268.30 Aligned_cols=205 Identities=17% Similarity=0.110 Sum_probs=149.3
Q ss_pred eeEEecCCCCCCCCCCceEEEeec------CCeEEEEecCCCchhhccccHHHHHHHHHHH--Hhhhh--------hhcc
Q 024370 58 GTHLIPHPNKVERGGEDAFFVSCY------NGGVIAVADGVSGWAEQNVDPSLFSRELMAN--ASYFV--------EDVE 121 (268)
Q Consensus 58 ~~~~~s~~G~~r~~neDa~~v~~~------~~~~~~VaDG~Gg~~~~~~as~~~~~~l~~~--~~~~~--------~~~~ 121 (268)
.++..+++|. |..|||++++... +..+|+|||||||+.++++|++.+.+.+.+. +.... ..+.
T Consensus 25 ~~~~~s~~G~-R~~nED~~~~~~~~~~~~~~~~l~~V~DGhGG~~~a~~as~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 103 (307)
T 2p8e_A 25 RYGLSSMQGW-RVEMEDAHTAVVGIPHGLEDWSFFAVYDGHAGSRVANYCSTHLLEHITTNEDFRAAGKSGSALELSVEN 103 (307)
T ss_dssp EEEEEEEEET-SSSCCEEEEEEEEETTTEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSTTTC-----------CHHH
T ss_pred eEEEEecCCC-CCcccceEEEEecCCCCCCCeEEEEEECCCCCHHHHHHHHHHHHHHHHhhHhhhhcccccccccccHHH
Confidence 3445677897 9999999987642 2359999999999999999999888877541 11000 0000
Q ss_pred CcccHHHHHHHHHh--------ccCCCCccceEEEEEeeCCeEEEEEecCCeeEEEECCeeEEeCccccccCC-------
Q 024370 122 VNYDPQILMRKAHA--------ATSSVGSATVIVAMLERNGILKVASVGDCGLRIIRKGQITFSSSPQEHYFD------- 186 (268)
Q Consensus 122 ~~~~~~~l~~~a~~--------~~~~~~~gtt~~~~l~~~~~l~ia~vGDsr~~l~r~g~~~~lt~dh~~~~~------- 186 (268)
+.......+..+++ .....++|||++++++.+++++++||||||+|++|+|++.+||.||.....
T Consensus 104 ~~~~l~~a~~~~~~~i~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~g~~~~lT~DH~~~~~~E~~rI~ 183 (307)
T 2p8e_A 104 VKNGIRTGFLKIDEYMRNFSDLRNGMDRSGSTAVGVMISPKHIYFINCGDSRAVLYRNGQVCFSTQDHKPCNPREKERIQ 183 (307)
T ss_dssp HHHHHHHHHHHHHHHHHTSTTTC---CCCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEEECCCCCTTSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhhhccCCCCCCCeEEEEEEECCcEEEEEccCcEEEEEECCccccCCCCCCCCCHHHHHHHH
Confidence 00111111222211 122357899999999999999999999999999999999999999964321
Q ss_pred ------CCcc-----ccccccCCc---------------cccceEEEEEcCCCC-EEEEecCCCCCCCChHHHHHHhhc-
Q 024370 187 ------CPYQ-----LSSEAVGQT---------------YLDAMVTTVELIEGD-TIVMGSDGLFDNVFDHEVVSMTTR- 238 (268)
Q Consensus 187 ------~p~~-----l~~~~~g~~---------------~~~~~~~~~~l~~gD-~liL~SDGl~d~l~~~ei~~~v~~- 238 (268)
.+.+ ..++++|+. ..+|++..+++.++| +||||||||||+++++|+.+++.+
T Consensus 184 ~~gg~v~~~rv~g~l~ltRalGd~~~k~~~~~~~~~~~v~~~pdv~~~~l~~~d~~llL~SDGl~d~ls~~ei~~~v~~~ 263 (307)
T 2p8e_A 184 NAGGSVMIQRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILACDGIWDVMSNEELCEYVKSR 263 (307)
T ss_dssp HTTCCEETTEETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTTEEEEEEECHHHHTTSCHHHHHHHHHHH
T ss_pred HcCCEEEeCcccCeEeccccccCHHHhcCcccCCCCCeEeccCeEEEEEcCCCCeEEEEECCCcccCCCHHHHHHHHHHH
Confidence 0111 223455552 458999999999997 689999999999999999999976
Q ss_pred ---CCCHHHHHHHHHHHHHhcchhhhhh
Q 024370 239 ---FIDVSEAGICSVFGSIYQKIIYSVA 263 (268)
Q Consensus 239 ---~~~~~~~a~~Lv~~A~~~~~~~~~~ 263 (268)
..+++++|+.|++.|+.+...+|++
T Consensus 264 ~~~~~~~~~~a~~Lv~~A~~~g~~DNiT 291 (307)
T 2p8e_A 264 LEVSDDLENVCNWVVDTCLHKGSRDNMS 291 (307)
T ss_dssp HTTCCCHHHHHHHHHHHHHHTTCCSCEE
T ss_pred HhcCCCHHHHHHHHHHHHHHcCCCCCeE
Confidence 5689999999999999987666654
No 5
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.3e-35 Score=258.97 Aligned_cols=203 Identities=18% Similarity=0.136 Sum_probs=153.1
Q ss_pred eEEecCCCCCCCCCCceEEEeec--CCeEEEEecCCCchhhccccHHHHHHHHHHHHhh------hhhhccCcccHHHHH
Q 024370 59 THLIPHPNKVERGGEDAFFVSCY--NGGVIAVADGVSGWAEQNVDPSLFSRELMANASY------FVEDVEVNYDPQILM 130 (268)
Q Consensus 59 ~~~~s~~G~~r~~neDa~~v~~~--~~~~~~VaDG~Gg~~~~~~as~~~~~~l~~~~~~------~~~~~~~~~~~~~l~ 130 (268)
+...+++|. |+.|||++++... +..+|+|||||||+.++++|++.+.+.+.+.+.. .+. ..+...+..+.
T Consensus 10 ~g~~s~~G~-R~~nED~~~~~~~~~~~~l~~V~DG~GG~~~a~~as~~~~~~l~~~~~~~~~~~~~l~-~a~~~~~~~i~ 87 (274)
T 2iq1_A 10 VGCASQIGK-RKENEDRFDFAQLTDEVLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPKEKNLETLLT-LAFLEIDKAFS 87 (274)
T ss_dssp CEEEEECCS-SSSCCEEEEEEECSSSEEEEEEEEEESSTHHHHHHHHHHHHHHHHHTTTCCCHHHHHH-HHHHHHHHHHH
T ss_pred EEEEecccC-CCCccceEEEeeCCCCeEEEEEECCCCCHHHHHHHHHHHHHHHHHHhcccccHHHHHH-HHHHHHHHHHH
Confidence 445678998 9999999998752 3459999999999999999998888877665432 111 12223333333
Q ss_pred HHHHhc--cCCCCccceEEEEEeeC-CeEEEEEecCCeeEEEECCeeEEeCccccccC----------------C-----
Q 024370 131 RKAHAA--TSSVGSATVIVAMLERN-GILKVASVGDCGLRIIRKGQITFSSSPQEHYF----------------D----- 186 (268)
Q Consensus 131 ~~a~~~--~~~~~~gtt~~~~l~~~-~~l~ia~vGDsr~~l~r~g~~~~lt~dh~~~~----------------~----- 186 (268)
+..... ....++|||++++++.+ ++++++||||||+|++|+|++.+||.||.... +
T Consensus 88 ~~~~~~~~~~~~~~GtT~~~~~i~~~~~l~~anvGDSR~~l~r~g~~~~lT~DH~~~~~~E~~Ri~~~gG~v~~~~~~~~ 167 (274)
T 2iq1_A 88 SHARLSADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGGFVAWNSLGQP 167 (274)
T ss_dssp HHHHC---CCGGGCEECEEEEEEETTTEEEEEEESSCEEEEEETTEEEECCCCCCTTSHHHHHHHHHTTCCEEECTTSCE
T ss_pred HHhhhccccCCCCCCCcEEEEEEECCCEEEEEEecCceEEEEeCCEeeECCCCCCCcCHHHHHHHHHcCCEEEcCCCCce
Confidence 333211 23457899999988874 58999999999999999999999999996521 0
Q ss_pred C-Ccc-ccccccCCc-------cccceEEEEEcCCC--CEEEEecCCCCCCCChHHHHHHhhcCCCHHHHHHHHHHHHHh
Q 024370 187 C-PYQ-LSSEAVGQT-------YLDAMVTTVELIEG--DTIVMGSDGLFDNVFDHEVVSMTTRFIDVSEAGICSVFGSIY 255 (268)
Q Consensus 187 ~-p~~-l~~~~~g~~-------~~~~~~~~~~l~~g--D~liL~SDGl~d~l~~~ei~~~v~~~~~~~~~a~~Lv~~A~~ 255 (268)
+ |.+ ..++++|+. ..+|++..+++.+| ++||||||||||+++++|+.+++.+..+|+++|+.|++.|+.
T Consensus 168 ~~~~~~~ltralGd~~~k~~~v~~~pdi~~~~l~~g~d~~lll~SDGl~d~l~~~ei~~~~~~~~~~~~~a~~L~~~A~~ 247 (274)
T 2iq1_A 168 HVNGRLAMTRSIGDLDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQCHDPNEAAHAVTEQAIQ 247 (274)
T ss_dssp EETTTBSCSBCEECGGGTTTTCBCCCEEEEEECCTTTEEEEEEECHHHHTTCCHHHHHHHHHTSSSHHHHHHHHHHHHHH
T ss_pred eECCeEeeccccCChhhccCCEEeCCEEEEEEeCCCCCcEEEEEccCcccCCCHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 0 111 223455553 46899999999986 589999999999999999999999877999999999999999
Q ss_pred cchhhhhh
Q 024370 256 QKIIYSVA 263 (268)
Q Consensus 256 ~~~~~~~~ 263 (268)
+...+|++
T Consensus 248 ~g~~DNiT 255 (274)
T 2iq1_A 248 YGTEDNST 255 (274)
T ss_dssp TTCCSCEE
T ss_pred cCCCCCeE
Confidence 87666554
No 6
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A
Probab=100.00 E-value=2.1e-35 Score=251.39 Aligned_cols=200 Identities=18% Similarity=0.091 Sum_probs=154.3
Q ss_pred eeeeEEecCCCCCCCCCCceEEEeecCCeEEEEecCCCchhhccccHHHHHHHHHHHHhhhh----hhccCcccHHHHHH
Q 024370 56 CVGTHLIPHPNKVERGGEDAFFVSCYNGGVIAVADGVSGWAEQNVDPSLFSRELMANASYFV----EDVEVNYDPQILMR 131 (268)
Q Consensus 56 ~~~~~~~s~~G~~r~~neDa~~v~~~~~~~~~VaDG~Gg~~~~~~as~~~~~~l~~~~~~~~----~~~~~~~~~~~l~~ 131 (268)
.+.++..+++|+.|+.|||++++ +..+|+|||||||+ |+.||+.+.+.+.+.+.... -...+...+..+.+
T Consensus 5 ~~~~~~~s~~G~~r~~neD~~~~---~~~~~~V~DG~Gg~--G~~as~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~ 79 (234)
T 2jfr_A 5 VLSAATATDQGPVRENNQDACLA---DGILYAVADGFGAR--GHHASATALKTLSAGFAAAPDRDGLLEAVQQANLRVFE 79 (234)
T ss_dssp EEEEEEEEECCSSCSSCCEEEEE---ETTEEEEEEEESTT--HHHHHHHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEecCCCCCCCcCCCccee---CCcEEEEEeCCCcc--HHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHH
Confidence 34566678899889999999977 45799999999998 78888888888877654320 00122223333333
Q ss_pred HHHhccCCCCccceEEEEEeeCCe---EEEEEecCCeeEEEECCeeEEeCcccccc--------------CCCCcc--cc
Q 024370 132 KAHAATSSVGSATVIVAMLERNGI---LKVASVGDCGLRIIRKGQITFSSSPQEHY--------------FDCPYQ--LS 192 (268)
Q Consensus 132 ~a~~~~~~~~~gtt~~~~l~~~~~---l~ia~vGDsr~~l~r~g~~~~lt~dh~~~--------------~~~p~~--l~ 192 (268)
........ +|||++++++.+++ ++++|+||||+|++|+|++.+||.||... ..+|.+ ++
T Consensus 80 ~~~~~~~~--~gtT~~~~~i~~~~~~~l~~anvGDsr~~l~r~g~~~~lt~dh~~~~~~~~~g~i~~~~~~~~~~~~~~t 157 (234)
T 2jfr_A 80 LLGDEPTV--SGTTLTAVAVFEPGQGGPLVVNIGDSPLYRIRDGHMEQLTDDHSVAGELVRMGEITRHEARWHPQRHLLT 157 (234)
T ss_dssp HHTTSSSC--CEECEEEEECCCGGGTSCEEEEESSCCEEEEETTEEEECSCCCBHHHHHHHTTSSCHHHHTTCTTTTCBS
T ss_pred hhccCCCC--CCccEEEEEEECCCccEEEEEEEccCceEEEECCEEEEeCCCCCHHHHHHHcCCCCHHHHhcCcccceee
Confidence 32222111 89999999998888 99999999999999999999999999652 235554 44
Q ss_pred ccccCCccccceEEEEEcCCCCEEEEecCCCCCCCChHHHHHHhhcCCCHHHHHHHHHHHHHhcchhhhhh
Q 024370 193 SEAVGQTYLDAMVTTVELIEGDTIVMGSDGLFDNVFDHEVVSMTTRFIDVSEAGICSVFGSIYQKIIYSVA 263 (268)
Q Consensus 193 ~~~~g~~~~~~~~~~~~l~~gD~liL~SDGl~d~l~~~ei~~~v~~~~~~~~~a~~Lv~~A~~~~~~~~~~ 263 (268)
+..+.....+|++..+++++||+||||||||||+++++++.+++ +..+++++|+.|++.|+.+...++++
T Consensus 158 ralG~~~~~~~~~~~~~l~~gd~lll~SDGl~d~~~~~~i~~~~-~~~~~~~~a~~l~~~a~~~g~~DniT 227 (234)
T 2jfr_A 158 RALGIGPHIGPDVFGIDCGPGDRLLISSDGLFAAADEALIVDAA-TSPDPQVAVRRLVEVANDAGGSDNTT 227 (234)
T ss_dssp CCBSSSSCCCCEEEECCCCTTCEEEEECGGGGTTSCHHHHHHHH-TCSSHHHHHHHHHHHHHHTTCCSCEE
T ss_pred ecCcCCCCceeEEEEEecCCCCEEEEECCCCccccCHHHHHHHH-ccCCHHHHHHHHHHHHHHcCCCCCeE
Confidence 44444456789999999999999999999999999999999999 76799999999999999876555543
No 7
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B*
Probab=100.00 E-value=4.5e-35 Score=260.56 Aligned_cols=203 Identities=16% Similarity=0.072 Sum_probs=151.9
Q ss_pred EEecCCCCCCCCCCceEEEeec------------------CCeEEEEecCCCchhhccccHHHHHHHHHHHHhhhhhh--
Q 024370 60 HLIPHPNKVERGGEDAFFVSCY------------------NGGVIAVADGVSGWAEQNVDPSLFSRELMANASYFVED-- 119 (268)
Q Consensus 60 ~~~s~~G~~r~~neDa~~v~~~------------------~~~~~~VaDG~Gg~~~~~~as~~~~~~l~~~~~~~~~~-- 119 (268)
+..+.+|. |..|||++++.+. +..+|+|||||||+.++++|++.+++.|.+.+......
T Consensus 12 g~~s~~G~-R~~nEDa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~DG~GG~~~~~~as~~~~~~l~~~~~~~~~~~~ 90 (316)
T 3kdj_B 12 GFTSICGR-RPEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHGGSQVANYCRERMHLALAEEIAKEKPMLS 90 (316)
T ss_dssp EEEEECTT-SSSCCEEEEEETTCC-----------CCGGGGCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHHCCCGG
T ss_pred EEEEeEeC-CCCCccceeeecccccccccccccccccCCCCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHHHHhhhcccc
Confidence 34567887 9999999998542 34599999999999999999999999988776432110
Q ss_pred --ccCcccHHHHHHHH----Hh---ccCCCCccceEEEEEeeCCeEEEEEecCCeeEEEECCeeEEeCccccccCC----
Q 024370 120 --VEVNYDPQILMRKA----HA---ATSSVGSATVIVAMLERNGILKVASVGDCGLRIIRKGQITFSSSPQEHYFD---- 186 (268)
Q Consensus 120 --~~~~~~~~~l~~~a----~~---~~~~~~~gtt~~~~l~~~~~l~ia~vGDsr~~l~r~g~~~~lt~dh~~~~~---- 186 (268)
..........++.+ .. .....++|||++++++.+++++++||||||+|++|+|++.+||.||.....
T Consensus 91 ~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSR~yl~r~g~~~~lT~DH~~~~~~e~~ 170 (316)
T 3kdj_B 91 DGDTWLEKWKKALFNSFLRVDSEIESVAPETVGSTSVVAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHKPDREDEAA 170 (316)
T ss_dssp GTHHHHHHHHHHHHHHHHHHHHHGGGTSCTTCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEESCCCCCTTSHHHHH
T ss_pred cccchHHHHHHHHHHHHHHHHHHHhcccCCCCCCcEEEEEEECCEEEEEEccCCEEEEEECCEecccCCCCCCCCHHHHH
Confidence 00001112222222 21 223457899999999999999999999999999999999999999963211
Q ss_pred ---------CC---cc-----ccccccCCc------cccceEEEEE-cCCCCEEEEecCCCCCCCChHHHHHHhhc----
Q 024370 187 ---------CP---YQ-----LSSEAVGQT------YLDAMVTTVE-LIEGDTIVMGSDGLFDNVFDHEVVSMTTR---- 238 (268)
Q Consensus 187 ---------~p---~~-----l~~~~~g~~------~~~~~~~~~~-l~~gD~liL~SDGl~d~l~~~ei~~~v~~---- 238 (268)
++ .+ ..++.+|+. ..+|++..++ +++||+||||||||||+++++|+.+++.+
T Consensus 171 ri~~~~g~v~~~~~~r~~g~l~~sRalGd~~~~~~~~~~pdv~~~~~~~~~d~llL~SDGl~d~l~~~ei~~~~~~~~~~ 250 (316)
T 3kdj_B 171 RIEAAGGKVIQWNGARVFGVLAMSRSIGDRYLKPSIIPDPEVTAVKRVKEDDCLILASDGVWDVMTDEEACEMARKRILL 250 (316)
T ss_dssp HHHHTTCCEEESSSEEETTTBSCSBCEECGGGTTTSBCCCEEEEEECCTTEEEEEEECHHHHTSSCHHHHHHHHHHHHHH
T ss_pred HHHHcCCeEEecCCceEcceeccccccCccccCCCcCCCCceEEEEecCCCCEEEEEccCcccCCCHHHHHHHHHHHhhh
Confidence 00 00 113445542 4678888888 78899999999999999999999999975
Q ss_pred -----------------------CCCHHHHHHHHHHHHHhcchhhhhh
Q 024370 239 -----------------------FIDVSEAGICSVFGSIYQKIIYSVA 263 (268)
Q Consensus 239 -----------------------~~~~~~~a~~Lv~~A~~~~~~~~~~ 263 (268)
..+++++|+.|++.|+.+...+|++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~Lv~~A~~~g~~DNiT 298 (316)
T 3kdj_B 251 WHKKNAVAGGASLLADERRKEGKDPAAMSAAEYLSKLAIQRGSKDNIS 298 (316)
T ss_dssp HTTC-----------------CCCHHHHHHHHHHHHHHHHTTCCSCEE
T ss_pred hccccccccccccccccccccccCchHHHHHHHHHHHHHHcCCCCCeE
Confidence 2358899999999999987776654
No 8
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae}
Probab=100.00 E-value=1.9e-34 Score=255.13 Aligned_cols=197 Identities=17% Similarity=0.076 Sum_probs=144.3
Q ss_pred eEEecCCCCCCCCCCceEEEee---cCCeEEEEecCCCchhhccccHHHHHHHHHHHHhh-------hhhhccCcccHHH
Q 024370 59 THLIPHPNKVERGGEDAFFVSC---YNGGVIAVADGVSGWAEQNVDPSLFSRELMANASY-------FVEDVEVNYDPQI 128 (268)
Q Consensus 59 ~~~~s~~G~~r~~neDa~~v~~---~~~~~~~VaDG~Gg~~~~~~as~~~~~~l~~~~~~-------~~~~~~~~~~~~~ 128 (268)
+...+.+|. |..|||++++.. .+..+|+|||||||+.++++|++.+.+.+.+.... .+. ..+...+..
T Consensus 25 ~~~~s~~G~-R~~nED~~~~~~~~~~~~~l~~V~DGhGG~~~a~~as~~~~~~l~~~~~~~~~~~~~~l~-~a~~~~~~~ 102 (304)
T 2i0o_A 25 SGSSSMQGW-RISQEDAHNCILNFDDQCSFFAVYDGHGGAEVAQYCSLHLPTFLKTVEAYGRKEFEKALK-EAFLGFDAT 102 (304)
T ss_dssp EEEEEEEES-SSCCCEEEEEEEEEETTEEEEEEEECSSCSHHHHHHHHHHHHHHHHSHHHHTTCHHHHHH-HHHHHHHHH
T ss_pred EEEeecCCC-CCCccCEEEEEeccCCCeEEEEEEcCCCCHHHHHHHHHHHHHHHHhhhhcccccHHHHHH-HHHHHHHHH
Confidence 444667886 999999998754 24469999999999999999999988877654211 010 011111221
Q ss_pred HHHHHH--------------hccCCCCccceEEEEEeeCCeEEEEEecCCeeEEEECCeeEEeCccccccCC--------
Q 024370 129 LMRKAH--------------AATSSVGSATVIVAMLERNGILKVASVGDCGLRIIRKGQITFSSSPQEHYFD-------- 186 (268)
Q Consensus 129 l~~~a~--------------~~~~~~~~gtt~~~~l~~~~~l~ia~vGDsr~~l~r~g~~~~lt~dh~~~~~-------- 186 (268)
+.+... ......++|||++++++.+++++++||||||+|++|+|++++||.||+....
T Consensus 103 l~~~~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~g~~~~LT~DH~~~~~~e~~rI~~ 182 (304)
T 2i0o_A 103 LLQEKVIEELKVLSGDSAGSDAEPGKDSGCTAVVALLHGKDLYVANAGDSRCVVCRNGKALEMSFDHKPEDTVEYQRIEK 182 (304)
T ss_dssp TTSHHHHHHHHHHHCC-----CCTTTSCEEEEEEEEEETTEEEEEEESSCEEEEEETTEEEECCCCCCTTSHHHHHHHHH
T ss_pred HHhhhhHHHHhhhccccccccccCCCCCCccEEEEEEECCEEEEEEccCcEEEEEECCEEEEcCCCcCCcCHHHHHHHHh
Confidence 111110 0112467899999999999999999999999999999999999999964221
Q ss_pred -----C-C-----ccccccccCCc---------------cccceEEEEEcCCCCE-EEEecCCCCCCCChHHHHHHhhc-
Q 024370 187 -----C-P-----YQLSSEAVGQT---------------YLDAMVTTVELIEGDT-IVMGSDGLFDNVFDHEVVSMTTR- 238 (268)
Q Consensus 187 -----~-p-----~~l~~~~~g~~---------------~~~~~~~~~~l~~gD~-liL~SDGl~d~l~~~ei~~~v~~- 238 (268)
+ + ....++++|+. ..+|++..+++.++|. ||||||||||+++++|+.+++.+
T Consensus 183 ~gg~v~~~~rv~g~l~ltRalGd~~~k~~~~l~~~~~~v~~~pdi~~~~l~~~D~fllL~SDGl~d~l~~~ei~~~v~~~ 262 (304)
T 2i0o_A 183 AGGRVTLDGRVNGGLNLSRAIGDHGYKMNKSLPAEEQMISALPDIEKITVGPEDEFMVLACDGIWNFMTSEQVVQFVQER 262 (304)
T ss_dssp TTCCBCTTSCBTTSCSCSBCEECGGGCCCTTSCGGGSSSBCCCEEEEEECCTTEEEEEEECHHHHTTCCHHHHHHHHHHH
T ss_pred CCCEEEeCCeEcCceeccccccCHHHccCccCCccCCeEEeeCeEEEEEcCCCCeEEEEECcCccccCCHHHHHHHHHHH
Confidence 1 1 11223445553 3589999999999997 69999999999999999999975
Q ss_pred ----CCCHHHHHHHHHHHHHhcc
Q 024370 239 ----FIDVSEAGICSVFGSIYQK 257 (268)
Q Consensus 239 ----~~~~~~~a~~Lv~~A~~~~ 257 (268)
..+++++|+.|++.|+.++
T Consensus 263 ~~~~~~~~~~~a~~L~~~a~~~~ 285 (304)
T 2i0o_A 263 INKPGMKLSKICEELFDHCLAPH 285 (304)
T ss_dssp HTSTTCCHHHHHHHHHHHHC---
T ss_pred HhhcCCCHHHHHHHHHHHHHHhh
Confidence 4689999999999999854
No 9
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B*
Probab=100.00 E-value=3.3e-35 Score=263.59 Aligned_cols=201 Identities=17% Similarity=0.167 Sum_probs=150.6
Q ss_pred EecCCCCCCCCCCceEEEeec-----------------------CCeEEEEecCCCchhhccccHHHHHHHHHHHHhhhh
Q 024370 61 LIPHPNKVERGGEDAFFVSCY-----------------------NGGVIAVADGVSGWAEQNVDPSLFSRELMANASYFV 117 (268)
Q Consensus 61 ~~s~~G~~r~~neDa~~v~~~-----------------------~~~~~~VaDG~Gg~~~~~~as~~~~~~l~~~~~~~~ 117 (268)
..+.+|. |..|||++++.+. +..+|+|||||||+.++++|++.+++.|.+.+....
T Consensus 18 ~~s~~G~-R~~nEDa~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~l~~V~DGhGG~~~~~~as~~~~~~l~~~~~~~~ 96 (337)
T 3qn1_B 18 TVSIQGN-RSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHKVADYCRDRLHFALAEEIERIK 96 (337)
T ss_dssp EEEECTT-SSSCCEEEEEEEEEEEEEGGGTC----------CEEEEEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHTC
T ss_pred EEEeeeC-CchhhhHHHHHhhhhcccchhcccccccccccccCCCeEEEEEEeCCCChhHHHHHHHHHHHHHHHHHHhhh
Confidence 3456887 9999999988643 235999999999999999999999999988765432
Q ss_pred hh-------ccCcccHHHHHHHH----Hh-------------------ccCCCCccceEEEEEeeCCeEEEEEecCCeeE
Q 024370 118 ED-------VEVNYDPQILMRKA----HA-------------------ATSSVGSATVIVAMLERNGILKVASVGDCGLR 167 (268)
Q Consensus 118 ~~-------~~~~~~~~~l~~~a----~~-------------------~~~~~~~gtt~~~~l~~~~~l~ia~vGDsr~~ 167 (268)
.. ..........++++ .. .....++|||++++++.++++|++||||||+|
T Consensus 97 ~~~~~~~~~~~~~~~~~~~l~~a~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~~anvGDSR~~ 176 (337)
T 3qn1_B 97 DELCKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAV 176 (337)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHTSSCBCCTTCSSCBCCCSSCTTCEECEEEEEECSSEEEEEEESSCEEE
T ss_pred hhhhccccccchHHHHHHHHHHHHHHhhHHHHhhhhccccccccccccccccCCCCceEEEEEEECCEEEEEeccCcEEE
Confidence 11 00011122222222 11 11235789999999999999999999999999
Q ss_pred EEECCeeEEeCccccccCC----------------------CCccccccccCCc------cccceEEEEEc-CCCCEEEE
Q 024370 168 IIRKGQITFSSSPQEHYFD----------------------CPYQLSSEAVGQT------YLDAMVTTVEL-IEGDTIVM 218 (268)
Q Consensus 168 l~r~g~~~~lt~dh~~~~~----------------------~p~~l~~~~~g~~------~~~~~~~~~~l-~~gD~liL 218 (268)
++|+|++.+||.||+.... ....++ +.+|+. ..+|++..+++ .+||+|||
T Consensus 177 l~r~g~~~~lT~DH~~~~~~e~~ri~~~gg~v~~~~~~r~~g~l~~s-RalGd~~~~~~v~~~pdv~~~~~~~~~d~llL 255 (337)
T 3qn1_B 177 LFRGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMS-RSIGDRYLKPYVIPEPEVTFMPRSREDECLIL 255 (337)
T ss_dssp EEETTEEEESCCCCCTTSHHHHHHHHHTTCCEEESSSEEETTTBSCS-BCEECGGGTTTSBCCCEEEEEECCTTEEEEEE
T ss_pred EEeCCEeeeecCCCCCCCHHHHHHHHHcCCeEEecCCceecCccccc-cccccccccCCCCCcceEEEEEeCCCCCEEEE
Confidence 9999999999999963211 111233 444542 45789999998 66999999
Q ss_pred ecCCCCCCCChHHHHHHhhc---------------------CCCHHHHHHHHHHHHHhcchhhhhh
Q 024370 219 GSDGLFDNVFDHEVVSMTTR---------------------FIDVSEAGICSVFGSIYQKIIYSVA 263 (268)
Q Consensus 219 ~SDGl~d~l~~~ei~~~v~~---------------------~~~~~~~a~~Lv~~A~~~~~~~~~~ 263 (268)
|||||||+++++||.+++.+ ..+++++|+.|++.|+.+-..+|++
T Consensus 256 ~SDGl~d~l~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Lv~~A~~~g~~DNiT 321 (337)
T 3qn1_B 256 ASDGLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLALQKGSKDNIS 321 (337)
T ss_dssp ECHHHHTTSCHHHHHHHHHHHHHHHHHHHCCC----CCSSCCHHHHHHHHHHHHHHHHTTCCSCEE
T ss_pred EecCcccCCCHHHHHHHHHHHhhhhccccccccccccccccChhHHHHHHHHHHHHHHcCCCCCEE
Confidence 99999999999999999975 3468899999999999987776654
No 10
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii}
Probab=100.00 E-value=8.6e-35 Score=259.44 Aligned_cols=204 Identities=13% Similarity=0.165 Sum_probs=149.8
Q ss_pred eeeEEecCCCCCCCCCCceEEEeec------CCeEEEEecCCCchhhccccHHHHHHHHHHH--Hhhhh-----------
Q 024370 57 VGTHLIPHPNKVERGGEDAFFVSCY------NGGVIAVADGVSGWAEQNVDPSLFSRELMAN--ASYFV----------- 117 (268)
Q Consensus 57 ~~~~~~s~~G~~r~~neDa~~v~~~------~~~~~~VaDG~Gg~~~~~~as~~~~~~l~~~--~~~~~----------- 117 (268)
+.++..+++|. |+.|||++++.+. +..+|+|||||||+.++++|++.+++.|.+. +.+..
T Consensus 22 ~~~~~~s~~G~-R~~nED~~~~~~~~~~~~~~~~l~~V~DGhGG~~~~~~as~~~~~~l~~~~~~~~~~~~l~~~~~~~~ 100 (324)
T 2i44_A 22 FDAAIFTDIGG-RKHQEDRFTLCPQLVPGRDDCAFFGVFDGTVGDFASENVKDLVVPQLISSPAWQEVTEMLRSDVPATE 100 (324)
T ss_dssp EEEEEEEECTT-SSSCCEEEEEESCCSTTCSSEEEEEEEEEESSSHHHHHHHHHHHHHHHTCHHHHHHHHHHTSCCCHHH
T ss_pred eEEEEEECCCC-CCccCCeEEEEecCCCCCCCeEEEEEeCCCCchHHHHHHHHHHHHHHHhhhHHHHHHHHhhccCCccc
Confidence 44556788998 9999999998753 2359999999999999999999999888652 22100
Q ss_pred ---------h---hccCcccHHHHHHHHHhc-cCCCCccceEEEEEeeCCeEEEEEecCCeeEEEEC---C-eeEEeCcc
Q 024370 118 ---------E---DVEVNYDPQILMRKAHAA-TSSVGSATVIVAMLERNGILKVASVGDCGLRIIRK---G-QITFSSSP 180 (268)
Q Consensus 118 ---------~---~~~~~~~~~~l~~~a~~~-~~~~~~gtt~~~~l~~~~~l~ia~vGDsr~~l~r~---g-~~~~lt~d 180 (268)
. ...+...+..+++..... ....++|||+++ +.++++|++||||||+|++|+ | ++.+||.|
T Consensus 101 ~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~g~gtt~~~--i~~~~l~vanvGDSRa~l~r~~~~g~~~~~LT~D 178 (324)
T 2i44_A 101 VDEKLPQLLDQAVDDMYKNADNELVKMCEQLNKDYASSTSVTAV--LAKGFVAVGHLGDSRIAMGVETPNGLNCEFLTVD 178 (324)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCEECEEEEE--EETTEEEEEEESSCEEEEEEEETTEEEEEESCCC
T ss_pred cccccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCeEEEE--EECCeEEEEEccCceEEEEeccCCCceEEECCCC
Confidence 0 012222333333333322 223455666544 788999999999999999996 7 89999999
Q ss_pred ccccCC------------------CCc-------c-ccccccCC--------------c------cccceEEEEEcCCCC
Q 024370 181 QEHYFD------------------CPY-------Q-LSSEAVGQ--------------T------YLDAMVTTVELIEGD 214 (268)
Q Consensus 181 h~~~~~------------------~p~-------~-l~~~~~g~--------------~------~~~~~~~~~~l~~gD 214 (268)
|+.... ++. . -..+++|+ . ..+|++..+++.++|
T Consensus 179 H~~~~~~E~~Ri~~~Gg~v~~~~~~~~~~~~~~g~l~~sra~Gd~p~~~~~~~~~g~~~~~~~~v~~~pdv~~~~l~~~d 258 (324)
T 2i44_A 179 HKPDMPHEKLRIMRNGGSVEYLHNHNNKPFIRGGDFSFRKSRGEQPMQLQYSRAFGGKDLKMYGLSNQPDVRVVRVTPQH 258 (324)
T ss_dssp CCTTSHHHHHHHHHTTCEEECCTTCTTSCEEECTTHHHHHHTTCCCCCBSSSBCEECGGGTTTTCBCCCEEEEEECCTTE
T ss_pred CCCcCHHHHHHHHHcCCEEEecccccCCCccccCcccchhhcCCccccceeccccCCccccCCeEeecCEEEEEEcCCCC
Confidence 975321 111 0 12234444 1 468999999999999
Q ss_pred -EEEEecCCCCCCCChHHHHHHhhcC----CCHHH--HHHHHHHHHHhcchhhhhh
Q 024370 215 -TIVMGSDGLFDNVFDHEVVSMTTRF----IDVSE--AGICSVFGSIYQKIIYSVA 263 (268)
Q Consensus 215 -~liL~SDGl~d~l~~~ei~~~v~~~----~~~~~--~a~~Lv~~A~~~~~~~~~~ 263 (268)
+||||||||||+++++|+.+++.+. .++++ +|+.|++.|+.+...+|++
T Consensus 259 ~~llLaSDGl~d~ls~~ei~~~v~~~~~~~~~~~~~~~a~~L~~~A~~~g~~DNiT 314 (324)
T 2i44_A 259 RVMILATDGLWDVMSAAQAVEIAMQARQEGRNPAQALVEMTLAEQQSRNQSADNIT 314 (324)
T ss_dssp EEEEEECHHHHTTCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTCCCCCEE
T ss_pred eEEEEEcCchhccCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCCCCCE
Confidence 8999999999999999999999763 58999 9999999999877666654
No 11
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A
Probab=100.00 E-value=2.1e-34 Score=263.00 Aligned_cols=203 Identities=19% Similarity=0.158 Sum_probs=155.3
Q ss_pred eEEecCCCCCCCCCCceEEEeec--CCeEEEEecCCCchhhccccHHHHHHHHHHHHhhh------hhhccCcccHHHHH
Q 024370 59 THLIPHPNKVERGGEDAFFVSCY--NGGVIAVADGVSGWAEQNVDPSLFSRELMANASYF------VEDVEVNYDPQILM 130 (268)
Q Consensus 59 ~~~~s~~G~~r~~neDa~~v~~~--~~~~~~VaDG~Gg~~~~~~as~~~~~~l~~~~~~~------~~~~~~~~~~~~l~ 130 (268)
++..+++|+ |+.|||++++... +..+|+|||||||+.++++|++.+.+.+.+.+... +. ..+...+..+.
T Consensus 124 ~g~~s~~G~-R~~NED~~~~~~~~~~~~l~~VaDG~GG~~~g~~as~~~~~~l~~~~~~~~~~~~~l~-~a~~~~n~~i~ 201 (389)
T 4da1_A 124 VGCASQIGK-RKENEDRFDFAQLTDEVLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPKEKNLETLLT-LAFLEIDKAFS 201 (389)
T ss_dssp CEEEEECTT-SSSCCEEEEEEECSSSEEEEEEEEEESSTHHHHHHHHHHHHHHHHHTTTCCCHHHHHH-HHHHHHHHHHH
T ss_pred EEEecCCCC-CCCCcceeeeeecCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHhccccCHHHHHH-HHHHHHHHHHH
Confidence 456788998 9999999998653 34599999999999999999999998887764321 11 12233334444
Q ss_pred HHHHhcc--CCCCccceEEEEEeeCC-eEEEEEecCCeeEEEECCeeEEeCccccccC-------------------CCC
Q 024370 131 RKAHAAT--SSVGSATVIVAMLERNG-ILKVASVGDCGLRIIRKGQITFSSSPQEHYF-------------------DCP 188 (268)
Q Consensus 131 ~~a~~~~--~~~~~gtt~~~~l~~~~-~l~ia~vGDsr~~l~r~g~~~~lt~dh~~~~-------------------~~p 188 (268)
+...... ...++|||++++++.++ +++++||||||+|++|+|++.+||.||.... ..+
T Consensus 202 ~~~~~~~~~~~~~~GtT~~~~li~~~~~l~vanvGDSRayl~r~g~~~~LT~DHs~~~~~E~~Ri~~~gG~v~~~~~~~~ 281 (389)
T 4da1_A 202 SHARLSADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGGFVAWNSLGQP 281 (389)
T ss_dssp HHHHHSSCGGGGGCEECEEEEEEETTTEEEEEEESSCEEEEEETTEEEECCCCCCTTSHHHHHHHHHHTCCEECC---CC
T ss_pred HHhhhccccccCCCCCeEEEEEEEcCCeEEEEEeeccEEEEEECCEeEEeCCCCCCCCHHHHHHHHHcCCeEecccCCCc
Confidence 4433322 23568999998888765 9999999999999999999999999996421 011
Q ss_pred c---c-ccccccCC-------ccccceEEEEEcCC--CCEEEEecCCCCCCCChHHHHHHhhcCCCHHHHHHHHHHHHHh
Q 024370 189 Y---Q-LSSEAVGQ-------TYLDAMVTTVELIE--GDTIVMGSDGLFDNVFDHEVVSMTTRFIDVSEAGICSVFGSIY 255 (268)
Q Consensus 189 ~---~-l~~~~~g~-------~~~~~~~~~~~l~~--gD~liL~SDGl~d~l~~~ei~~~v~~~~~~~~~a~~Lv~~A~~ 255 (268)
+ + ..++++|+ ...+|++..+++.+ +|+||||||||||+++++++.+++.+..+++++|+.|++.|+.
T Consensus 282 ~~~g~l~ltRalGd~~~k~~~v~~~pdi~~~~l~~~~dd~llL~SDGL~d~l~~~ei~~il~~~~~~~~~a~~Lv~~A~~ 361 (389)
T 4da1_A 282 HVNGRLAMTRSIGDLDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQCHDPNEAAHAVTEQAIQ 361 (389)
T ss_dssp EETTTBSCSBCEECGGGGGGTCBCCCEEEEEECCSSSCEEEEEECHHHHTTCCHHHHHHHHHHSSSHHHHHHHHHHHHHH
T ss_pred cCCCeEeeEeeeCChhhccCCCCCCCceEEEEEcCCCCcEEEEEeCCcccCCCHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 1 1 22345555 24689999999986 4689999999999999999999998877999999999999999
Q ss_pred cchhhhhh
Q 024370 256 QKIIYSVA 263 (268)
Q Consensus 256 ~~~~~~~~ 263 (268)
+....|++
T Consensus 362 ~g~~DNiT 369 (389)
T 4da1_A 362 YGTEDNST 369 (389)
T ss_dssp HTCCSCEE
T ss_pred cCCCCCeE
Confidence 87766654
No 12
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A
Probab=100.00 E-value=1.8e-34 Score=262.70 Aligned_cols=204 Identities=15% Similarity=0.075 Sum_probs=153.5
Q ss_pred eeEEecCCCCCCCCCCceEEEeec------CCeEEEEecCCCchhhccccHHHHHHHHHHH--Hh------------hhh
Q 024370 58 GTHLIPHPNKVERGGEDAFFVSCY------NGGVIAVADGVSGWAEQNVDPSLFSRELMAN--AS------------YFV 117 (268)
Q Consensus 58 ~~~~~s~~G~~r~~neDa~~v~~~------~~~~~~VaDG~Gg~~~~~~as~~~~~~l~~~--~~------------~~~ 117 (268)
.++..+++|. |..|||++++... +..+|+|||||||+.++++|++.+++.|... +. ..+
T Consensus 23 ~~g~~s~~G~-R~~nEDa~~~~~~~~~~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~~~~~~~~~~~~~~~~~~l 101 (382)
T 1a6q_A 23 RYGLSSMQGW-RVEMEDAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGI 101 (382)
T ss_dssp EEEEEEEEET-SSSCCEEEEEEEEETTTEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSHHHHCSSSSCCHHHHHHHH
T ss_pred EEEEEecCCC-CCCCCceeEEecCCCCCCCCeEEEEEEcCCCcHHHHHHHHHHHHHHHHhhhhhhccCCCCCHHHHHHHH
Confidence 3444677897 9999999988642 2359999999999999999999998887631 11 111
Q ss_pred hhccCcccHHHHHHHHHhccCCCCccceEEEEEeeCCeEEEEEecCCeeEEEECCeeEEeCccccccCC-----------
Q 024370 118 EDVEVNYDPQILMRKAHAATSSVGSATVIVAMLERNGILKVASVGDCGLRIIRKGQITFSSSPQEHYFD----------- 186 (268)
Q Consensus 118 ~~~~~~~~~~~l~~~a~~~~~~~~~gtt~~~~l~~~~~l~ia~vGDsr~~l~r~g~~~~lt~dh~~~~~----------- 186 (268)
. ..+...+..+.+.........++|||++++++.++++|++||||||+|++|+|++.+||.||.....
T Consensus 102 ~-~af~~~n~~i~~~~~~~~~~~~~GtT~~~~li~~~~l~vanvGDSRayl~r~g~~~~LT~DHs~~~~~E~~RI~~~gg 180 (382)
T 1a6q_A 102 R-TGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGG 180 (382)
T ss_dssp H-HHHHHHHHHHHHHHHHTTCCCCCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEEECCCCCTTSHHHHHHHHHTTC
T ss_pred H-HHHHHHHHHHHhhhhhccCCCCCcceEEEEEEECCeEEEEEcCCCeEEEEECCceEEeCCCCCCCCHHHHHHHHhcCc
Confidence 1 1222333344443333344567899999999999999999999999999999999999999964321
Q ss_pred --CCcc-----ccccccCCc---------------cccceEEEEEcC-CC-CEEEEecCCCCCCCChHHHHHHhhc----
Q 024370 187 --CPYQ-----LSSEAVGQT---------------YLDAMVTTVELI-EG-DTIVMGSDGLFDNVFDHEVVSMTTR---- 238 (268)
Q Consensus 187 --~p~~-----l~~~~~g~~---------------~~~~~~~~~~l~-~g-D~liL~SDGl~d~l~~~ei~~~v~~---- 238 (268)
++.+ ..++++|+. ..+|++..+++. ++ |+||||||||||+++++|+.+++.+
T Consensus 181 ~v~~~Rv~g~l~ltRalGd~~~K~~~~~~~~~~~v~~~Pdv~~~~l~~~~dd~llLaSDGlwd~ls~~ei~~~v~~~~~~ 260 (382)
T 1a6q_A 181 SVMIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEV 260 (382)
T ss_dssp CEETTEETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTTTEEEEEEECHHHHTTSCHHHHHHHHHHHHTT
T ss_pred EEecccccCceeeeeecCcHhhcccccCCCccCeeeeeeeEEEEEccCCCCeEEEEeccCccCCCChHHHHHHHHHHHhc
Confidence 1111 223445542 457999999998 74 6899999999999999999999976
Q ss_pred CCCHHHHHHHHHHHHHhcchhhhhh
Q 024370 239 FIDVSEAGICSVFGSIYQKIIYSVA 263 (268)
Q Consensus 239 ~~~~~~~a~~Lv~~A~~~~~~~~~~ 263 (268)
..+++++|+.|++.|+.+...+|++
T Consensus 261 ~~~~~~~a~~Lv~~A~~~g~~DNiT 285 (382)
T 1a6q_A 261 TDDLEKVCNEVVDTCLYKGSRDNMS 285 (382)
T ss_dssp CCCHHHHHHHHHHHHHHTTCCSCEE
T ss_pred CCCHHHHHHHHHHHHHhcCCcCCEE
Confidence 4689999999999999876655543
No 13
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans}
Probab=100.00 E-value=2.1e-33 Score=236.06 Aligned_cols=178 Identities=15% Similarity=0.117 Sum_probs=139.7
Q ss_pred CCeEEEEecCCCchhhccccHHHHHHHHHHHHhhhhh-hccCcccHHHHHHHHHhccCCCCccceEEEEEee--CCeEEE
Q 024370 82 NGGVIAVADGVSGWAEQNVDPSLFSRELMANASYFVE-DVEVNYDPQILMRKAHAATSSVGSATVIVAMLER--NGILKV 158 (268)
Q Consensus 82 ~~~~~~VaDG~Gg~~~~~~as~~~~~~l~~~~~~~~~-~~~~~~~~~~l~~~a~~~~~~~~~gtt~~~~l~~--~~~l~i 158 (268)
+..+|+|||||||+..|++||+.+++.+.+.+..... .+.+..++..+.+.........++|||++++++. ++++++
T Consensus 9 ~~~l~~VaDG~GG~~~g~~AS~~~~~~l~~~~~~~~~~~~~~~~an~~l~~~~~~~~~~~~~GtT~~~~~i~~~~~~~~~ 88 (211)
T 3rnr_A 9 DKAYCVVVDGMGGMIRGDEAAQRALSASVGVLDAGGSPLDAVLAAQAAVHRWASQGGILGRTGATMAVAAVNLRDGTLEW 88 (211)
T ss_dssp TEEEEEEEEECTTSTTHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEEEETTTTEEEE
T ss_pred CccEEEEEeCCcCcHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHhhccCCCCcchhheeeeeeeCCCEEEE
Confidence 5569999999999999999999999999887654221 1344556667777766666778899999999999 999999
Q ss_pred EEecCCeeEEEECCeeEEeCccccccC----------CCCcc--ccccccCCccccceE--EEEEcCCCCEEEEecCCCC
Q 024370 159 ASVGDCGLRIIRKGQITFSSSPQEHYF----------DCPYQ--LSSEAVGQTYLDAMV--TTVELIEGDTIVMGSDGLF 224 (268)
Q Consensus 159 a~vGDsr~~l~r~g~~~~lt~dh~~~~----------~~p~~--l~~~~~g~~~~~~~~--~~~~l~~gD~liL~SDGl~ 224 (268)
+|+||||+|++|+|++.+||.||.... .+|++ +++..+.....+|++ ..+++++||+|||||||||
T Consensus 89 anvGDSr~yl~r~g~~~~lt~dh~~~~~~~~~g~~~~~~~~~~~ltralG~~~~~~~~~~~~~~~l~~gd~llL~SDGl~ 168 (211)
T 3rnr_A 89 ASVGDCRVYLFKGGRLSRLSLDHNVSSEMVLLGRGPVPGPAGEMITSFIGIENLTEISTSEAPLPLEAGEGVLVVSDGVY 168 (211)
T ss_dssp EEESSCEEEEEETTEEEECCCCCBHHHHHHHTTSCCCCSHHHHCBSCCBTCSSCCCCEECSSCEECCTTCEEEEEEC---
T ss_pred EEEccCeEEEEeCCEEEEECCCcHHHHHHHHcCCChhhCCCccEEecccCCCCCcceeEecceecCCCCCEEEEEcCCCC
Confidence 999999999999999999999996421 24543 455445456678888 8899999999999999999
Q ss_pred CCCChHHHHHHhhcCCCHHHHHHHHHHHHHhcc--hhhhhh
Q 024370 225 DNVFDHEVVSMTTRFIDVSEAGICSVFGSIYQK--IIYSVA 263 (268)
Q Consensus 225 d~l~~~ei~~~v~~~~~~~~~a~~Lv~~A~~~~--~~~~~~ 263 (268)
|+++++++.+++.+..+ |+.|++.|+.+. ..++++
T Consensus 169 d~~~~~~i~~~l~~~~~----a~~L~~~a~~~g~~~~DNiT 205 (211)
T 3rnr_A 169 RSLHEDRIAMALSRGSD----ARGILQEVEAQGRPYQDNAT 205 (211)
T ss_dssp --CCTTEEEEEECTTSC----HHHHHHHHHHSCTTSCSSCE
T ss_pred CCcCHHHHHHHHhcCCh----HHHHHHHHHHcCCCCCCceE
Confidence 99999999999977544 999999999876 555543
No 14
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae}
Probab=99.98 E-value=4.1e-33 Score=251.91 Aligned_cols=195 Identities=13% Similarity=0.186 Sum_probs=144.0
Q ss_pred EEecCCCCCCC--CCCceEEEeec--CCeEEEEecCCCchhhccccHHHHHHHHHH-HH---------hhhhhhccCccc
Q 024370 60 HLIPHPNKVER--GGEDAFFVSCY--NGGVIAVADGVSGWAEQNVDPSLFSRELMA-NA---------SYFVEDVEVNYD 125 (268)
Q Consensus 60 ~~~s~~G~~r~--~neDa~~v~~~--~~~~~~VaDG~Gg~~~~~~as~~~~~~l~~-~~---------~~~~~~~~~~~~ 125 (268)
..++.+|.+|. .|||++++... +..+|+|||||||+.++++|++.+.+.|.+ .+ .+.+. ..+...
T Consensus 23 ~~~~~~G~r~~~~~nED~~~~~~~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~l~~~~~~~~~~~~l~-~a~~~~ 101 (358)
T 2irm_A 23 QIYKDDGRRCEGYESRDKKCLCISDNNTSLYAILSGHNGVTVAENALQEMAAELLLGQLNVCNTDEAVKELIR-QSFMSV 101 (358)
T ss_dssp EEECSSSCEEECSSCCEEEEEEECSSSEEEEEEEEEESCSHHHHHHHHHHHHHSSSSTTTTCCSHHHHHHHHH-HHHHHH
T ss_pred ceeecCCCCCCCCCCCceEEEEECCCCEEEEEEEcCCCCHHHHHHHHHHHHHHHHHhhhccccchhhHHHHHH-HHHHHH
Confidence 34567897443 69999988753 345999999999999999998888877653 11 11111 122223
Q ss_pred HHHHHHHHHh-----------------------------------ccCCCCccceEEEEEeeCCeEEEEEecCCeeEEEE
Q 024370 126 PQILMRKAHA-----------------------------------ATSSVGSATVIVAMLERNGILKVASVGDCGLRIIR 170 (268)
Q Consensus 126 ~~~l~~~a~~-----------------------------------~~~~~~~gtt~~~~l~~~~~l~ia~vGDsr~~l~r 170 (268)
+..+++.... .....++|||++++++.++++|+|||||||+|++|
T Consensus 102 d~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~GtTav~~li~~~~l~vAnvGDSRa~l~r 181 (358)
T 2irm_A 102 EKGYFDSINPHVATKTAIQLHLSADGMNQYEISQQFENVLQKLDSLNNALSVGSSAVLALIHRSHLYLGNIGNCRALLCK 181 (358)
T ss_dssp HHHHHHHSHHHHHHHHHHHHTTC---------------CCCTHHHHHTTTTCEEEEEEEEEESSEEEEEEESSCEEEEEE
T ss_pred HHHHHHHHHhhhhccccccccccccccccccchhhccchhhhcccccCCCCCCCcEEEEEEECCEEEEEEcccCeEEEEE
Confidence 3333332100 01234689999999999999999999999999999
Q ss_pred C---C--eeEEeCccccccCC------------------CCccccccccCC--------------------ccccceEEE
Q 024370 171 K---G--QITFSSSPQEHYFD------------------CPYQLSSEAVGQ--------------------TYLDAMVTT 207 (268)
Q Consensus 171 ~---g--~~~~lt~dh~~~~~------------------~p~~l~~~~~g~--------------------~~~~~~~~~ 207 (268)
+ | ++++||.||+.... .+. +.++++|+ ...+|++..
T Consensus 182 ~~~~g~~~~~~LT~DH~~~~~~E~~Ri~~~Gg~v~~~r~~g~-llTRalGd~~~K~~~~~~~~~~~~~~~~v~~~Pdi~~ 260 (358)
T 2irm_A 182 TDEHDTLTVTQLSVDHNLLNAEEAARLFRLGLMAQNFEGVPL-YSTRCIGNYLGKAGYKDCNFLSSATAEPVIFEPEIVG 260 (358)
T ss_dssp CCTTCSCEEEECSCCCBTTSHHHHHHHHTTTCCGGGGTTCTT-CBSBCEECHHHHTTGGGSSSSTTCSSCSSBCCCEEEE
T ss_pred ecCCCceeeEeCCCCCCCCCHHHHHHHHHcCCeEeccCcCCE-EcccCCcCHHHhccccccccccccCCCCEeccCeEEE
Confidence 8 8 99999999964221 122 34455565 245899995
Q ss_pred -EEcCCCCE-EEEecCCCCCCCC----------hHHHHHHhhcC----CCHHHHHHHHHHHHHhc
Q 024370 208 -VELIEGDT-IVMGSDGLFDNVF----------DHEVVSMTTRF----IDVSEAGICSVFGSIYQ 256 (268)
Q Consensus 208 -~~l~~gD~-liL~SDGl~d~l~----------~~ei~~~v~~~----~~~~~~a~~Lv~~A~~~ 256 (268)
+++.++|. ||||||||||+++ ++|+++++.+. .+++++|+.|++.|+..
T Consensus 261 ~~~l~~~d~fllL~SDGl~d~l~~~~~~~~~~~~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~~~ 325 (358)
T 2irm_A 261 GIQITPACRFLVLMSSGLCRALHEIFPGDASTGNRELVRMISEEFQNQSTLGGVAQSVVHRIVQA 325 (358)
T ss_dssp EEECCTTEEEEEEECHHHHHHHHHHSCSSSSHHHHHHHHHHHHHTTTCCSHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCcEEEEECCCcccCccccccccccccHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHh
Confidence 99999886 8999999999999 89999999763 58999999999999874
No 15
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii}
Probab=99.98 E-value=5.5e-32 Score=244.86 Aligned_cols=201 Identities=18% Similarity=0.112 Sum_probs=140.8
Q ss_pred eeEEecCCCCCCCCCCceEEEee-----cCCeEEEEecCCCchhhccccHHHHHHHHHHHHh---hhhhhccCcccHHHH
Q 024370 58 GTHLIPHPNKVERGGEDAFFVSC-----YNGGVIAVADGVSGWAEQNVDPSLFSRELMANAS---YFVEDVEVNYDPQIL 129 (268)
Q Consensus 58 ~~~~~s~~G~~r~~neDa~~v~~-----~~~~~~~VaDG~Gg~~~~~~as~~~~~~l~~~~~---~~~~~~~~~~~~~~l 129 (268)
.++..+++|+ |..|||++++.. .+..||+|||||||..+++++++.+.+.|.+... ..+. ..+...+..+
T Consensus 14 ~~~~~s~~G~-R~~nED~~~v~~~~~~~~~~~lf~VfDGHGG~~as~~a~~~l~~~l~~~~~~~~~~l~-~a~~~~d~~i 91 (364)
T 2isn_A 14 TTVAATMLGR-RPTDEDAILVSAPATSRPNVRIKAVFDGHAGEATSQYCAKHAAKHLGKLSEFTFAEVK-KACLSLDAEI 91 (364)
T ss_dssp EEEEEEECTT-SSSCCEEEEEECC----CCEEEEEEEEEESCSHHHHHHHHHHHHHHTTCSSCCHHHHH-HHHHHHHHHH
T ss_pred EEEEEEcCCC-CCcCCCeeEEeccCCCCCCeEEEEEEECCCCHHHHHHHHHHHHHHHHHhhcccHHHHH-HHHHHHHHHH
Confidence 4556788997 999999998863 2345999999999876666665555544422100 0010 1122222333
Q ss_pred HHHHHhccCCCCccceEEEEEeeC--------------------------------------------------------
Q 024370 130 MRKAHAATSSVGSATVIVAMLERN-------------------------------------------------------- 153 (268)
Q Consensus 130 ~~~a~~~~~~~~~gtt~~~~l~~~-------------------------------------------------------- 153 (268)
++... ....+|||++++++.+
T Consensus 92 ~~~~~---~~~~~GtT~v~~~i~~~~~p~~~~~~g~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (364)
T 2isn_A 92 IRKLG---PKHVAGSTGIIVAIERLSAPVVENVVGREIVPRAHEETFVPLEKLIQEEEEAEHPELVGRYPRVPDVQQKTI 168 (364)
T ss_dssp HHHHC---SSSCCEECEEEEEEEECSSCEEEEEETTEECCC-----CCCHHHHHHHHHHC-----CCSSCCCCCCEEEEE
T ss_pred HHhcc---cCCCCCcceehhhhhccccccccccccccccccccccchhhhhhhhhhhhhccccccccccccccccccccc
Confidence 33222 2257899988887742
Q ss_pred ----CeEEEEEecCCeeEEE-ECCeeEEeCccccccC-----------------CCCc---c-ccccccCCcc-------
Q 024370 154 ----GILKVASVGDCGLRII-RKGQITFSSSPQEHYF-----------------DCPY---Q-LSSEAVGQTY------- 200 (268)
Q Consensus 154 ----~~l~ia~vGDsr~~l~-r~g~~~~lt~dh~~~~-----------------~~p~---~-l~~~~~g~~~------- 200 (268)
.++|++||||||+|++ |+|++.+||.||.... .+|. . ..++++|+..
T Consensus 169 ~~g~~~l~vanvGDSRayl~~r~g~~~~LT~DH~~~~~~e~~rI~~~gG~v~~~~~~rv~g~l~ltRalGd~~~k~~~~l 248 (364)
T 2isn_A 169 PAGSFLVTAINIGDSRATLIHSDGGLTRLSKDHKPNHPTEASRIEKAGGSVETFDVPRVDGVLALSRAFGDSDFKMNPNL 248 (364)
T ss_dssp CTTCEEEEEEEESSCEEEEECTTSCEEECCCCCCTTSHHHHHHHHHTTCCEEESSSEEETTTBSCSBCEECGGGSCCCSS
T ss_pred ccCccEEEEEECccCEEEEEeeCCEEEEcCcCCCCCCHHHHHHHHHcCCeEecCCCcccCCceeeEEEecchhhcccccc
Confidence 3899999999999999 6999999999996421 1232 1 1345555532
Q ss_pred --------ccceEEEEEcCCCCEEEEecCCCCCCCC--hHHHHHHh-----hcCCCHHHHHHHHHHHHHhcchhhhhh
Q 024370 201 --------LDAMVTTVELIEGDTIVMGSDGLFDNVF--DHEVVSMT-----TRFIDVSEAGICSVFGSIYQKIIYSVA 263 (268)
Q Consensus 201 --------~~~~~~~~~l~~gD~liL~SDGl~d~l~--~~ei~~~v-----~~~~~~~~~a~~Lv~~A~~~~~~~~~~ 263 (268)
.+|++..+++.++|+||||||||||+++ ++++.+++ ....+++++|+.|++.|+.+...+|++
T Consensus 249 ~~~~~~v~~~Pdv~~~~l~~~D~llL~SDGl~d~l~~~~~~v~~~~~~~~~~~~~~~~~~a~~Lv~~A~~~g~~DNiT 326 (364)
T 2isn_A 249 PPEEQKVIAVPDVRQFYALSSDLLLLACDGVYEPSGMDWAYVRDLTVAEMQRSKGDLEEVAARVMDYAYDMNSQDNIS 326 (364)
T ss_dssp CGGGSSSBCCCEEEEEEECTTCEEEEECHHHHCSSSCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHTTCCSCEE
T ss_pred CcccCceEEEeEEEEEECCCCCEEEEEcCCCCCCCCCCHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHhcCCCCCEE
Confidence 5799999999999999999999999976 77777665 334589999999999999987666654
No 16
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A
Probab=99.97 E-value=2.6e-32 Score=250.02 Aligned_cols=190 Identities=16% Similarity=0.135 Sum_probs=138.3
Q ss_pred CCCCCCCCCceEEEeec--CCeEEEEecCCCchhhccccHHHHHHHHHHH----------HhhhhhhccCcccHHHHHHH
Q 024370 65 PNKVERGGEDAFFVSCY--NGGVIAVADGVSGWAEQNVDPSLFSRELMAN----------ASYFVEDVEVNYDPQILMRK 132 (268)
Q Consensus 65 ~G~~r~~neDa~~v~~~--~~~~~~VaDG~Gg~~~~~~as~~~~~~l~~~----------~~~~~~~~~~~~~~~~l~~~ 132 (268)
+|+.|..|||++++... +..||+|||||||+.++++|++.+.+.|.+. ..+.+. ..+...+..+++.
T Consensus 42 ~~~~r~~nED~~~~~~~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~~~~~~~~~~~~~~l~-~af~~~~~~i~~~ 120 (401)
T 2j4o_A 42 KGTESHPPEDSWLKFRSENNCFLYGVFNGYDGNRVTNFVAQRLSAELLLGQLNAEHAEADVRRVLL-QAFDVVERSFLES 120 (401)
T ss_dssp SCEECCCCCEEEEEEEETTTEEEEEEEEEESSSHHHHHHHHHHHHTTSSSSCCTTSCHHHHHHHHH-HHHHHHHHHHHHH
T ss_pred cccCCCCCCceEEEecCCCCeEEEEEEcCCCCHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHH-HHHHHHHHHHHHH
Confidence 34445589999988752 3459999999999999999999888766421 111111 1222223333222
Q ss_pred HHhc----------------------------------cCCCCccceEEEEEeeCCeEEEEEecCCeeEEEECC----ee
Q 024370 133 AHAA----------------------------------TSSVGSATVIVAMLERNGILKVASVGDCGLRIIRKG----QI 174 (268)
Q Consensus 133 a~~~----------------------------------~~~~~~gtt~~~~l~~~~~l~ia~vGDsr~~l~r~g----~~ 174 (268)
.... ....++|||++++++.++++|+|||||||+|++|+| ++
T Consensus 121 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~GtTa~~~li~~~~l~vanvGDSRa~l~r~~~~g~~~ 200 (401)
T 2j4o_A 121 IDDALAEKASLQSQLPEGVPQHQLPPQYQKILERLKTLEREISGGAMAVVAVLLNNKLYVANVGTNRALLCKSTVDGLQV 200 (401)
T ss_dssp HHHHHHHHHHHHHTSCTTCCSSCSCGGGHHHHHHHHHHHHHHCCEEEEEEEEEETTEEEEEEESSCEEEEEEECSSSEEE
T ss_pred HHHHHhhhhcccccccccccccccccccchhhhhhhcccccCCCccCEEEEEEECCEEEEEEccCceEEEEEcCCCCceE
Confidence 1000 012368999999999999999999999999999988 99
Q ss_pred EEeCccccccCC--------CC-------------ccccccccCCc--------------------cccceEEE-EEcCC
Q 024370 175 TFSSSPQEHYFD--------CP-------------YQLSSEAVGQT--------------------YLDAMVTT-VELIE 212 (268)
Q Consensus 175 ~~lt~dh~~~~~--------~p-------------~~l~~~~~g~~--------------------~~~~~~~~-~~l~~ 212 (268)
++||.||+.... .+ ....++++|+. ..+|++.. +++.+
T Consensus 201 ~~LT~DH~~~~~~E~~Ri~~~Gg~v~~~~~~r~~g~l~vtRalGd~~~k~~~~~~~~~~~~~~~~v~~~Pdv~~~~~l~~ 280 (401)
T 2j4o_A 201 TQLNVDHTTENEDELFRLSQLGLDAGKIKQVGIICGQESTRRIGDYKVKYGYTDIDLLSAAKSKPIIAEPEIHGAQPLDG 280 (401)
T ss_dssp EECSCCCSTTSHHHHHHHHTTTCCHHHHHHHCCBTTBCCSBCEECHHHHHSGGGSTTTTTCSSCSSBCCCEEEEEEECTT
T ss_pred EECCCCCCCCCHHHHHHHHHcCCCeeeccCccccCCcccccccCCHhhcccccccccccccCCCCeeccceEEEeEEeCC
Confidence 999999965321 11 11233455552 34799996 99999
Q ss_pred CC-EEEEecCCCCCCC--------ChHHHHHHhhc----CCCHHHHHHHHHHHHHh
Q 024370 213 GD-TIVMGSDGLFDNV--------FDHEVVSMTTR----FIDVSEAGICSVFGSIY 255 (268)
Q Consensus 213 gD-~liL~SDGl~d~l--------~~~ei~~~v~~----~~~~~~~a~~Lv~~A~~ 255 (268)
+| +||||||||||++ +++||++++.+ ..+++++|+.|++.|+.
T Consensus 281 ~d~flvLaSDGlwd~l~~~~~~~~s~~ei~~~v~~~l~~~~~~~~~a~~Lv~~A~~ 336 (401)
T 2j4o_A 281 VTGFLVLMSEGLYKALEAAHGPGQANQEIAAMIDTEFAKQTSLDAVAQAVVDRVKR 336 (401)
T ss_dssp CCEEEEEECHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHH
T ss_pred CCcEEEEEccchhhcccccccCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 88 6999999999999 89999999976 46899999999999986
No 17
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A
Probab=99.97 E-value=5.3e-32 Score=251.85 Aligned_cols=194 Identities=17% Similarity=0.143 Sum_probs=137.9
Q ss_pred cCCCCCCCCCCceEEEee---cCCeEEEEecCCCchhhccccHHHHHHHHHHHH------hhh---hhh-----------
Q 024370 63 PHPNKVERGGEDAFFVSC---YNGGVIAVADGVSGWAEQNVDPSLFSRELMANA------SYF---VED----------- 119 (268)
Q Consensus 63 s~~G~~r~~neDa~~v~~---~~~~~~~VaDG~Gg~~~~~~as~~~~~~l~~~~------~~~---~~~----------- 119 (268)
+++|..|..|||++.+.. .+..||+|||||||+.++++|++.+.+.|...+ .+. ...
T Consensus 43 s~~g~~R~~nED~~~v~~~~~~~~~lfgVfDGHGG~~aa~~as~~L~~~i~~~l~~~~~l~~~~~~~~~~~~~~~~l~~~ 122 (467)
T 2pnq_A 43 SNRLPANAPIEDRRSATTCLQTRGMLLGVFDGHAGCACSQAVSERLFYYIAVSLLPHETLLEIENAVESGRALLPILQWH 122 (467)
T ss_dssp EEEECCSSSCCEEEEEEEESSSSCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHCCHHHHHHHHTTTC----CCCCEEEC
T ss_pred eeccCCCCCCCCceeeeeccCCCcEEEEEECCCCCHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhhhcccccccccccc
Confidence 457778999999998753 245699999999999999999999998886542 110 000
Q ss_pred ---cc-----------------------C-----c-ccHHHHHHHHHhc----------------------cCCCCccce
Q 024370 120 ---VE-----------------------V-----N-YDPQILMRKAHAA----------------------TSSVGSATV 145 (268)
Q Consensus 120 ---~~-----------------------~-----~-~~~~~l~~~a~~~----------------------~~~~~~gtt 145 (268)
.. . . ......++.++.. ....++|||
T Consensus 123 ~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~aL~~af~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~GtT 202 (467)
T 2pnq_A 123 KHPNDYFSKEASKLYFNGLRTYWQELIDLNTGESADIDVKEALINAFKRLDNDISLEAQVGDPNSFLNYLVLRVAFSGAT 202 (467)
T ss_dssp CCTTCCCCSTTHHHHHHHHHHHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHSEEC
T ss_pred ccccccchhhhhhhhhcchhhhhhhhccccccccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccccccccCCCCcce
Confidence 00 0 0 0122222222110 123468999
Q ss_pred EEEEEeeCCeEEEEEecCCeeEEEE---CC--eeEEeCccccccC---------CC-----------Cc----ccccccc
Q 024370 146 IVAMLERNGILKVASVGDCGLRIIR---KG--QITFSSSPQEHYF---------DC-----------PY----QLSSEAV 196 (268)
Q Consensus 146 ~~~~l~~~~~l~ia~vGDsr~~l~r---~g--~~~~lt~dh~~~~---------~~-----------p~----~l~~~~~ 196 (268)
++++++.++++|+||+||||+|++| +| ++.+||.||+... .+ +. ...++++
T Consensus 203 a~v~li~~~~l~vAnvGDSRa~l~r~~~~g~~~~~~LT~DH~~~~~~E~~Ri~~~g~~~~~~~~~~~~Rv~G~l~vtRAl 282 (467)
T 2pnq_A 203 ACVAHVDGVDLHVANTGDSRAMLGVQEEDGSWSAVTLSNDHNAQNERELQRLKLEHPKNEAKSVVKQDRLLGLLMPFRAF 282 (467)
T ss_dssp EEEEEEETTEEEEEEESSCEEEEEEECTTSCEEEEECCCCCSTTCHHHHHHHHHTSCGGGHHHHBSSSSBTTTBSSSBCE
T ss_pred EEEEEEECCEEEEEECCCceEEEEEecCCCcEEEEECCCCCCCCCHHHHHHHHHcCCCcccceeEecCccccccccchhc
Confidence 9999999999999999999999999 47 8999999996521 01 11 1123444
Q ss_pred CCc---------------------------------------cccceEEEEEcCCCC-EEEEecCCCCCCCChHHHHHHh
Q 024370 197 GQT---------------------------------------YLDAMVTTVELIEGD-TIVMGSDGLFDNVFDHEVVSMT 236 (268)
Q Consensus 197 g~~---------------------------------------~~~~~~~~~~l~~gD-~liL~SDGl~d~l~~~ei~~~v 236 (268)
|+. ..+|++..+++.++| +||||||||||+|+++|+++++
T Consensus 283 Gd~~~K~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~v~~~Pdv~~~~l~~~D~fLVLaSDGLwd~ls~~eiv~iv 362 (467)
T 2pnq_A 283 GDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIPPNYHTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRIV 362 (467)
T ss_dssp ECGGGTSCHHHHHHHHSSSCC-----------CTTCSSSCCCBCCCEEEEEECCTTEEEEEEECHHHHTTSCHHHHHHHH
T ss_pred CchhhcccchhhhhhhcccccccccccccccccccccCCCcccccceEEEEEcCCCCeEEEEEecCccccCChHHHHHHH
Confidence 442 357999999999998 5679999999999999999999
Q ss_pred hcCC------CH------------------------------HHHHHHHHHHHHhc
Q 024370 237 TRFI------DV------------------------------SEAGICSVFGSIYQ 256 (268)
Q Consensus 237 ~~~~------~~------------------------------~~~a~~Lv~~A~~~ 256 (268)
.+.. +| +.+|..||+.|+..
T Consensus 363 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~naA~~Lir~Al~~ 418 (467)
T 2pnq_A 363 GEYLTGMHHQQPIAVGGYKVTLGQMHGLLTERRAKMSSVFEDQNAATHLIRHAVGN 418 (467)
T ss_dssp HHHHTTCSSCC-------------------------------CCHHHHHHHHHHC-
T ss_pred HHHHhhccccCcccccccCccHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcC
Confidence 6521 33 66899999999875
No 18
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii}
Probab=99.97 E-value=9.2e-32 Score=244.30 Aligned_cols=196 Identities=17% Similarity=0.110 Sum_probs=139.0
Q ss_pred EEecCCCCCCCCC-----CceEEEee-----cCCeEEEEecCCCchhhccccHHHHHHHHHHHHh---hhhhhccCcccH
Q 024370 60 HLIPHPNKVERGG-----EDAFFVSC-----YNGGVIAVADGVSGWAEQNVDPSLFSRELMANAS---YFVEDVEVNYDP 126 (268)
Q Consensus 60 ~~~s~~G~~r~~n-----eDa~~v~~-----~~~~~~~VaDG~Gg~~~~~~as~~~~~~l~~~~~---~~~~~~~~~~~~ 126 (268)
+..+++|. |+.| ||++++.. .+..+|+|||||||+.++++|++.+.+.|.+... +.+. ..+...+
T Consensus 16 ~~~s~~G~-R~~~ED~~neD~~~~~~~~~~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~~~~~~al~-~af~~~d 93 (377)
T 3d8k_A 16 ASATSRNR-RPTSESPHSDDVVVVEGMLRGRPETRVHAMFDGFQGRHSAMWLAQNVMNYLNDLRDVNEEEIT-RQFERMD 93 (377)
T ss_dssp HHTTTCEE-EEEECC---CEEEEEEEECSSCTTEEEEEEEEBSSSSHHHHHHHHHHHHHHTTCSSSSHHHHH-HHHHHHH
T ss_pred EEEEccCC-CCccccchhcceEEEecccCCCCCeEEEEEEcCCCcHHHHHHHHHHHHHHHHHhcccHHHHHH-HHHHHHH
Confidence 34678897 7765 56666643 2335999999999999999998888877643210 0010 0111122
Q ss_pred HHHHHHHHhccCCCCccceEEEEEee---------------------------------------------------CCe
Q 024370 127 QILMRKAHAATSSVGSATVIVAMLER---------------------------------------------------NGI 155 (268)
Q Consensus 127 ~~l~~~a~~~~~~~~~gtt~~~~l~~---------------------------------------------------~~~ 155 (268)
..+.+. ...+|||++++++. +++
T Consensus 94 ~~l~~~------~~~~GtTa~~~~i~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~g~ta~a~vali~~~~p~~~~~~~~ 167 (377)
T 3d8k_A 94 GDLRAA------NLPGGSSALIIFVRYEKKPTEARVVGRQIVPEGAKEFTSVAEALGGPLMPVVAMNFRRDPRAAKGIYT 167 (377)
T ss_dssp HHHHHH------TCCCCBCEEEEEEEEESSCCCEEEETTEEECCC---CCCHHHHSSCCCCCCEEECGGGCGGGTTCEEE
T ss_pred HHHHhc------ccCCCCceEEEEEeccccccccccccccccccccccccccccccccccccceeeecccccccccCCCe
Confidence 222211 12578888877763 148
Q ss_pred EEEEEecCCeeEEEECCeeEEeCccccccCC-------------C--Cc--c-----ccccccCCcc-------------
Q 024370 156 LKVASVGDCGLRIIRKGQITFSSSPQEHYFD-------------C--PY--Q-----LSSEAVGQTY------------- 200 (268)
Q Consensus 156 l~ia~vGDsr~~l~r~g~~~~lt~dh~~~~~-------------~--p~--~-----l~~~~~g~~~------------- 200 (268)
+|++||||||+|++|+|++.+||.||+.... + .. + ..++++|+..
T Consensus 168 l~vanvGDSRa~l~r~g~~~~LT~DH~~~~~~E~~RI~~~gg~v~~~~g~~rv~G~l~vtRalGd~~~k~~~~~~~~~~~ 247 (377)
T 3d8k_A 168 IHVASLGNSRCVLKSGRTAIHLSTPHTASSHKERHRVQAAGGVFTTVNGELLLGGVVPMTRAFGSFDFKKGGQGKLQQDL 247 (377)
T ss_dssp EEEEEESSCEEEEEETTEEEESSCCCSSSSHHHHHHHHTTTCCEEECSSSEEETTTBSCSBCSSCGGGSCC---CCSSCS
T ss_pred EEEEEcccceEEEEECCEEEECCcCCCCCCHHHHHHHHHcCCEEEecCCcEEEcCceecceeecChhhhcccccccccCc
Confidence 9999999999999999999999999965320 0 11 1 1345566532
Q ss_pred --ccceEEEEEcCCCCEEEEecCCCCCCCChHHHHHHhhc-----CCCHHHHHHHHHHHHHhcchhhhhh
Q 024370 201 --LDAMVTTVELIEGDTIVMGSDGLFDNVFDHEVVSMTTR-----FIDVSEAGICSVFGSIYQKIIYSVA 263 (268)
Q Consensus 201 --~~~~~~~~~l~~gD~liL~SDGl~d~l~~~ei~~~v~~-----~~~~~~~a~~Lv~~A~~~~~~~~~~ 263 (268)
.+|++..+++.++|+||||||||||+++++|+++.+.. ..+++++|+.|++.|+.+...+|++
T Consensus 248 v~~~Pdv~~~~l~~~D~llL~SDGl~d~ls~~e~v~~v~~~~~~~~~~~~~~a~~Lv~~A~~~g~~DNiT 317 (377)
T 3d8k_A 248 VSAVPDVTTFFAYPGDDIVAGTAGAFAHFRSHAAIAAAIALYPVSPETVLDAAKAMVVNAKRRKVTKNIS 317 (377)
T ss_dssp SBCCCEEEEEEECTTCEEEEECGGGGCSCSSHHHHHHHHTTSCCCGGGHHHHHHHHHHTTTTSSCCSCCC
T ss_pred cccCCcEEEEEcCCCCEEEEEECCcccCCCcHHHHHHHHHHhhccCCCHHHHHHHHHHHHHhcCCCCCEE
Confidence 58999999999999999999999999999998875543 3489999999999999887666654
No 19
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A*
Probab=99.90 E-value=3.6e-22 Score=170.44 Aligned_cols=187 Identities=16% Similarity=0.097 Sum_probs=136.8
Q ss_pred CcceeeeeeEEecCCCCCCCCCCceEEEeecC-Ce-EEEEecCCCchhhccccHHHHHHHHHHHHhhhhhhccCcccHHH
Q 024370 51 PELSFCVGTHLIPHPNKVERGGEDAFFVSCYN-GG-VIAVADGVSGWAEQNVDPSLFSRELMANASYFVEDVEVNYDPQI 128 (268)
Q Consensus 51 ~~~~~~~~~~~~s~~G~~r~~neDa~~v~~~~-~~-~~~VaDG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~~~~ 128 (268)
..+.+.+++++.+.++ +..++|+|.+.+.+ .. +++|+||+|+...|..++..+...+........ .+..
T Consensus 4 ~~~~i~~~~~~~~~p~--~~v~GD~y~~~~~~~~~~~~~vaDg~G~G~~aa~~s~~~~~~l~~~~~~~~-------~~~~ 74 (242)
T 3t91_A 4 MSYRVSTGAAHAAKGG--GLVSGDSYSMMELGARKYAAAISDGMGNGARAHFESNETIKLLEKILESGI-------DEKI 74 (242)
T ss_dssp CCCEEEEEEEEECTTS--CSCCSCEEEEEEETTTEEEEEEECC-----CCSEEECHHHHHHHHHHHHTC-------CHHH
T ss_pred ceEEEEEEeehhcCCc--cccCCcEEEEEEeCCCeEEEEEEeeCCCCHHHHHHHHHHHHHHHHHHHhCC-------CHHH
Confidence 5678899999998888 78999999886533 33 699999999999999998888887766544321 3445
Q ss_pred HHHHHHhc---cCCCCccceEEEEEee--CCeEEEEEecCCeeEEEECCeeEEeCccccccCCCCccccccccCCccccc
Q 024370 129 LMRKAHAA---TSSVGSATVIVAMLER--NGILKVASVGDCGLRIIRKGQITFSSSPQEHYFDCPYQLSSEAVGQTYLDA 203 (268)
Q Consensus 129 l~~~a~~~---~~~~~~gtt~~~~l~~--~~~l~ia~vGDsr~~l~r~g~~~~lt~dh~~~~~~p~~l~~~~~g~~~~~~ 203 (268)
+++..+.. ....++++|++++++. +++++++|+||+|+|++|+|++.+++.++.. .+.....++
T Consensus 75 ~l~~~n~~l~~~~~~~~~~T~~~~~id~~~~~l~~~~aG~~~~~l~r~g~~~~l~~~~~~-----------lG~~~~~~~ 143 (242)
T 3t91_A 75 AIKTINSILSLRTTDEIYSTLDLSIIDLQDASCKFLKVGSTPSFIKRGDQVMKVQASNLP-----------IGIINEFDV 143 (242)
T ss_dssp HHHHHHHHHTTC----CCCCEEEEEEETTTCEEEEEEESCCCEEEEETTEEEECCCC----------------CCCTTCE
T ss_pred HHHHHHHHHHhcCCCCeEeEEEEEEEECCCCEEEEEcCCCCceEEEECCEEEEecCCCce-----------eEecCCCcc
Confidence 55554432 2234677888888885 7899999999999999999999988754211 122244567
Q ss_pred eEEEEEcCCCCEEEEecCCCCCCCC-----hHHHHHHhhc--CCCHHHHHHHHHHHHHhcc
Q 024370 204 MVTTVELIEGDTIVMGSDGLFDNVF-----DHEVVSMTTR--FIDVSEAGICSVFGSIYQK 257 (268)
Q Consensus 204 ~~~~~~l~~gD~liL~SDGl~d~l~-----~~ei~~~v~~--~~~~~~~a~~Lv~~A~~~~ 257 (268)
+...+++++||+|+||||||||.++ +..+.+++.. ..+++++++.|++.+....
T Consensus 144 ~~~~~~l~~GD~lll~SDGl~e~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~l~~~~~~~~ 204 (242)
T 3t91_A 144 EVVSEQLKAGDLLIMMSDGIFEGPKHVENHDLWMKRKMKGLKTNDPQEIADLLMEEVIRTR 204 (242)
T ss_dssp EEEEEECCTTCEEEEECHHHHTCSTTCSCHHHHHHHHHHTCCCCCHHHHHHHHHHHHHHHT
T ss_pred eEEEEEeCCCCEEEEECCCcccCCCcccchHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHc
Confidence 8889999999999999999999998 6677777764 3589999999999997754
No 20
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus}
Probab=99.86 E-value=3.7e-20 Score=158.33 Aligned_cols=186 Identities=12% Similarity=-0.008 Sum_probs=137.4
Q ss_pred cceeeeeeEEecCCCCCCCCCCceEEEeecC-Ce-EEEEecCCCchhhccccHHHHHHHHHHHHhhhhhhccCcccHHHH
Q 024370 52 ELSFCVGTHLIPHPNKVERGGEDAFFVSCYN-GG-VIAVADGVSGWAEQNVDPSLFSRELMANASYFVEDVEVNYDPQIL 129 (268)
Q Consensus 52 ~~~~~~~~~~~s~~G~~r~~neDa~~v~~~~-~~-~~~VaDG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~~~~l 129 (268)
++.+.++++..+.++ +..++|+|.+.+.+ .. +++|+||+|++..|..++..+...+........ .+..+
T Consensus 8 ~~~~~~~~~~~~~~~--~~vgGD~y~~~~~~~~~~~~~vaD~~G~G~~aa~~s~~~~~~l~~~~~~~~-------~~~~~ 78 (242)
T 3pu9_A 8 PVTIELAVAKTHKFG--TRESGDTVELVERPGGGFSAVLVDGQGSGAGAKRLSLLVAGAAVRLLNEGV-------RDGAA 78 (242)
T ss_dssp CEEEEEEEEEECCTT--CSSCSEEEEEEECTTSEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHTTC-------CHHHH
T ss_pred CcEEEEEEEecccCc--cccCCceEEEEEeCCCEEEEEEEecCCCCHHHHHHHHHHHHHHHHHHHcCC-------CHHHH
Confidence 455677777777776 78999999887543 33 699999999988888888877776665543321 23344
Q ss_pred HHHHHhc---cCCCCccceEEEEEee--CCeEEEEEecCCeeEEEECCeeEEeCccccccCCCCccccccccCCccccce
Q 024370 130 MRKAHAA---TSSVGSATVIVAMLER--NGILKVASVGDCGLRIIRKGQITFSSSPQEHYFDCPYQLSSEAVGQTYLDAM 204 (268)
Q Consensus 130 ~~~a~~~---~~~~~~gtt~~~~l~~--~~~l~ia~vGDsr~~l~r~g~~~~lt~dh~~~~~~p~~l~~~~~g~~~~~~~ 204 (268)
++..+.. ....+..+|++++++. +++++++|+||+++|++|+|++.+++.++.. .+.....+++
T Consensus 79 l~~~n~~l~~~~~~~~~~T~~~~~id~~~~~l~~~~aG~~~~~l~r~g~~~~l~~~~~~-----------lG~~~~~~~~ 147 (242)
T 3pu9_A 79 ARAAHDFLYAMRDGKVSAALDILSVDLASRSVLVTRNSEVPMLLGRNGEFEQISESGGR-----------IGIYRHTRPR 147 (242)
T ss_dssp HHHHHHHHHHHTTTCCCEEEEEEEEETTTTEEEEEEESCCCEEEEETTEEEEECCCCCC-----------BSSCTTCCCE
T ss_pred HHHHHHHHHhccCCCcEEEEEEEEEECCCCEEEEEeCCCCcEEEEECCEEEEeCCCCcc-----------ccccCCCCce
Confidence 4433321 1234567888888874 6799999999999999999999999876432 2223455678
Q ss_pred EEEEEcCCCCEEEEecCCCCCCCC-------hHHHHHHhhc-CCCHHHHHHHHHHHHHhcc
Q 024370 205 VTTVELIEGDTIVMGSDGLFDNVF-------DHEVVSMTTR-FIDVSEAGICSVFGSIYQK 257 (268)
Q Consensus 205 ~~~~~l~~gD~liL~SDGl~d~l~-------~~ei~~~v~~-~~~~~~~a~~Lv~~A~~~~ 257 (268)
...+++++||+|+||||||+|..+ .+++..++.. ..+++++++.|++.+....
T Consensus 148 ~~~~~l~~Gd~lll~TDGl~e~~~~~~~~~g~~~l~~l~~~~~~~~~~~~~~l~~~~~~~~ 208 (242)
T 3pu9_A 148 VLEFPAEPGLTVILVSDGIIGAGGRRGQPLEFLATGGRVAGPETPAQAIADELLEAALVAD 208 (242)
T ss_dssp EEEEECCTTCEEEEECHHHHTTTTTTTCCCCHHHHHHHHCCTTCCHHHHHHHHHHHHHHHT
T ss_pred EEEEEeCCCCEEEEECcCcccCCCCccccccHHHHHHHHhccCCCHHHHHHHHHHHHHHhc
Confidence 889999999999999999998765 4777666542 3589999999999998653
No 21
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica}
Probab=99.80 E-value=3.3e-18 Score=141.33 Aligned_cols=173 Identities=17% Similarity=0.190 Sum_probs=126.9
Q ss_pred eeeeeEEecCCCCCCCCCCceEEEeecCCe-EEEEecCCCchhhccccHHHHHHHHHHHHhhhhhhccCcccHHHHHHHH
Q 024370 55 FCVGTHLIPHPNKVERGGEDAFFVSCYNGG-VIAVADGVSGWAEQNVDPSLFSRELMANASYFVEDVEVNYDPQILMRKA 133 (268)
Q Consensus 55 ~~~~~~~~s~~G~~r~~neDa~~v~~~~~~-~~~VaDG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~a 133 (268)
+.++.+..+.++ +..++|+|.+...+.. +++|+||+|....+..++..+.+.+... ....+.+++++.
T Consensus 4 ~~~~~~~~p~~~--~~v~GD~y~~~~~~~~~~~~v~Dv~GhG~~Aa~~s~~~~~~l~~~---------~~~~p~~il~~l 72 (193)
T 3zt9_A 4 LEVGIYTRAREG--EIACGDACLVKRVEGVIFLAVGDGIGHGPEAARAAEIAIASMESS---------MNTGLVNIFQLC 72 (193)
T ss_dssp CCEEEEEECCTT--CSSCSEEEEEEEETTEEEEEEEEESSSHHHHHHHHHHHHHHHHHH---------TTSCHHHHHHHH
T ss_pred cEEEEEEeccCC--CCCCCCeEEEEEeCCEEEEEEEeCCCCCHHHHHHHHHHHHHHHHc---------ccCCHHHHHHHH
Confidence 567787887776 7789999988765444 8999999998766666665555544331 123566777766
Q ss_pred HhccCCCCccceEEEEEee--CCeEEEEEecCCeeEEEECCeeEEeCccccccCCCCccccccccCCc-cccceEEEEEc
Q 024370 134 HAATSSVGSATVIVAMLER--NGILKVASVGDCGLRIIRKGQITFSSSPQEHYFDCPYQLSSEAVGQT-YLDAMVTTVEL 210 (268)
Q Consensus 134 ~~~~~~~~~gtt~~~~l~~--~~~l~ia~vGDsr~~l~r~g~~~~lt~dh~~~~~~p~~l~~~~~g~~-~~~~~~~~~~l 210 (268)
+...... .+.|++++.+. .+++.++|+|+++.|++|+|++..+... + ..+|.. ..+++...+++
T Consensus 73 n~~l~~~-~~~t~~~~~id~~~~~l~~~~aGh~~~~l~~~~~~~~l~~~-------~-----g~lG~~~~~~~~~~~~~l 139 (193)
T 3zt9_A 73 HRELRGT-RGAVAALCRVDRRQGLWQAAIVGNIHVKILSAKGIITPLAT-------P-----GILGYNYPHQLLIAKGSY 139 (193)
T ss_dssp HHHHTTS-SCEEEEEEEEETTTTEEEEEEESSCEEEEEETTEEECCCCB-------C-----CBBTTBCCSSCCCEEEEC
T ss_pred HHHHhcc-CceEEEEEEEECCCCEEEEEecCCceEEEEcCCcEEEecCC-------C-----CceeccCCccceeEEecc
Confidence 6543322 35566666664 6799999999999999999887665432 1 112322 22567788999
Q ss_pred CCCCEEEEecCCCCCCCChHHHHHHhhcCCCHHHHHHHHHHHH
Q 024370 211 IEGDTIVMGSDGLFDNVFDHEVVSMTTRFIDVSEAGICSVFGS 253 (268)
Q Consensus 211 ~~gD~liL~SDGl~d~l~~~ei~~~v~~~~~~~~~a~~Lv~~A 253 (268)
++||+|+||||||++.++.+++..++. .+|+++|+.|++.+
T Consensus 140 ~~gd~l~l~sDGl~e~~~~~~~~~~~~--~~~~~~a~~l~~~~ 180 (193)
T 3zt9_A 140 QEGDLFLIHSDGIQEGAVPLALLANYR--LTAEELVRLIGEKY 180 (193)
T ss_dssp CTTCEEEEECTTSCTTCSCGGGGGCTT--SCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCccChhhhhchhc--CCHHHHHHHHHHHh
Confidence 999999999999999999998887653 38999999999997
No 22
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A
Probab=99.72 E-value=8.1e-17 Score=138.27 Aligned_cols=171 Identities=10% Similarity=-0.067 Sum_probs=111.6
Q ss_pred CCCCCceEEEee-cC-CeEEEEecCCCchhhccccHHHHHHHHHHHHhhhhhh-ccCcccHHHHHHHHHhcc--CCCCcc
Q 024370 69 ERGGEDAFFVSC-YN-GGVIAVADGVSGWAEQNVDPSLFSRELMANASYFVED-VEVNYDPQILMRKAHAAT--SSVGSA 143 (268)
Q Consensus 69 r~~neDa~~v~~-~~-~~~~~VaDG~Gg~~~~~~as~~~~~~l~~~~~~~~~~-~~~~~~~~~l~~~a~~~~--~~~~~g 143 (268)
+..+.|+|-+.. .+ ..+++|+||+|+...+..++..+...+.......... ......+..+++..+... ...+++
T Consensus 48 ~~vgGD~yd~~~~~~~~~~~~vaD~~GhG~~aa~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~ln~~l~~~~~~~~ 127 (255)
T 3f79_A 48 LYLSGDFVDYFRVDERRVAFYLADVSGHGASSAFVTVLLKFMTTRLLYESRRNGTLPEFKPSEVLAHINRGLINTKLGKH 127 (255)
T ss_dssp SSSCSEEEEEEEETTTEEEEEEEEESSCSHHHHHHHHHHHHHHHHHHHHHTTCCC----CHHHHHHHHHHHHBTTBSSCC
T ss_pred hhcCceEEeEEEeCCCEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHHHhcCCCCE
Confidence 678999985544 33 3489999999987777676666655555443322110 112234566666665432 235788
Q ss_pred ceEEEEEe--eCCeEEEEEecCC-eeEEEECCeeEEeCccccccCCCCccccccccCCccccceEEEEEcCCCCEEEEec
Q 024370 144 TVIVAMLE--RNGILKVASVGDC-GLRIIRKGQITFSSSPQEHYFDCPYQLSSEAVGQTYLDAMVTTVELIEGDTIVMGS 220 (268)
Q Consensus 144 tt~~~~l~--~~~~l~ia~vGDs-r~~l~r~g~~~~lt~dh~~~~~~p~~l~~~~~g~~~~~~~~~~~~l~~gD~liL~S 220 (268)
+|++++++ .+++++++|+||+ +.|++++|++..++.++.. .|.....+++...+++.+||.|+|||
T Consensus 128 ~T~~~~~id~~~~~l~~~~aGh~p~~~l~~~g~~~~l~~~~~~-----------lG~~~~~~~~~~~~~l~~gd~lll~T 196 (255)
T 3f79_A 128 VTMLGGVIDLEKNSLTYSIGGHLPLPVLFVEGQAGYLEGRGLP-----------VGLFDDATYDDRVMELPPSFSLSLFS 196 (255)
T ss_dssp EEEEEEEEETTTTEEEEEECSCSCCCEEEC--CEEECCC----------------CCSSCCCCCC---BCCSSEEEEEEC
T ss_pred EEEEEEEEECCCCEEEEEeCCCCCceEEEeCCeEEEeCCCCce-----------EEEcCCCceEEEEEEECCCCEEEEEC
Confidence 99999888 4679999999995 5899999999988865321 12223455777888999999999999
Q ss_pred CCCCCCCChHH-------HHHHhhc-CCCHHHHHHHHH
Q 024370 221 DGLFDNVFDHE-------VVSMTTR-FIDVSEAGICSV 250 (268)
Q Consensus 221 DGl~d~l~~~e-------i~~~v~~-~~~~~~~a~~Lv 250 (268)
|||+|.++.++ +.+++.+ ..+++++++.|+
T Consensus 197 DGl~e~~~~~~~~~g~~~l~~~l~~~~~~~~~~~~~l~ 234 (255)
T 3f79_A 197 DGILDVLPGATLKEKEASLPEQVAAAGGTLDGLRQVFG 234 (255)
T ss_dssp SCCCCCSCC---CCTTTSSHHHHHHHSCSSHHHHHHC-
T ss_pred CCcCcccCCCcchhhHHHHHHHHHhcCCCHHHHHHHHH
Confidence 99999998777 8888854 236788888776
No 23
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis}
Probab=99.32 E-value=2.1e-10 Score=104.60 Aligned_cols=181 Identities=13% Similarity=0.087 Sum_probs=111.6
Q ss_pred eeeeeEEecCCCCCCCCCCceEEEeecCCe-EEEEecCCCchhhccccHHHHHHHHHHHHhhhhhhccCcccHHHHHHHH
Q 024370 55 FCVGTHLIPHPNKVERGGEDAFFVSCYNGG-VIAVADGVSGWAEQNVDPSLFSRELMANASYFVEDVEVNYDPQILMRKA 133 (268)
Q Consensus 55 ~~~~~~~~s~~G~~r~~neDa~~v~~~~~~-~~~VaDG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~a 133 (268)
+.+...+.+.... ...+.|.|.+.+.+.. +++|+|++|..-.+...+..+...+...... ...+..+++..
T Consensus 36 ~~~~~~y~P~~~~-~~vgGD~y~~~~~~~~~~~~v~Dv~GhGv~AA~~~~~~~~~l~~~~~~-------~~~p~~il~~l 107 (399)
T 3ke6_A 36 ADIAAEYLVAAED-TAAGGDWFDALALGDRLVLVVGDVVGHGVEAAAVMSQLRTALRMQISA-------GYTVVEALEAV 107 (399)
T ss_dssp EEEEEEEECSSSS-CSCCSEEEEEEECSSEEEEEEEECSSCSHHHHHHHHHHHHHHHHHHHT-------TCCHHHHHHHH
T ss_pred eEEEEEEEECCCC-CCCCCceEEEEEECCEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHhc-------CCCHHHHHHHH
Confidence 3444444443211 4688999977764434 8999999986544444444444333332221 12445555554
Q ss_pred Hhc--cCCCCccceEEEEEee--CCeEEEEEecCCeeEEEE-CCeeEEeCccccccCCCCccccccccCCccccceEEEE
Q 024370 134 HAA--TSSVGSATVIVAMLER--NGILKVASVGDCGLRIIR-KGQITFSSSPQEHYFDCPYQLSSEAVGQTYLDAMVTTV 208 (268)
Q Consensus 134 ~~~--~~~~~~gtt~~~~l~~--~~~l~ia~vGDsr~~l~r-~g~~~~lt~dh~~~~~~p~~l~~~~~g~~~~~~~~~~~ 208 (268)
+.. ....+.++|++++.++ .+++.++++|+.+.|+++ +|++..+..++.. .+|. ..+.....+
T Consensus 108 n~~~~~~~~~~~~t~~~~~id~~~~~l~~~~aGh~~~~l~~~~g~~~~l~~~~~~-----------plG~-~~~~~~~~~ 175 (399)
T 3ke6_A 108 DRFHKQVPGSKSATMCVGSLDFTSGEFQYCTAGHPPPLLVTADASARYVEPTGAG-----------PLGS-GTGFPVRSE 175 (399)
T ss_dssp HHHGGGSTTCTTCEEEEEEEETTTCEEEEEEESSCCCEEECTTSCEEECCCCSCC-----------CTTS-SCCCCCEEE
T ss_pred HHHHHhcCCCcEEEEEEEEEECCCCEEEEECCCCChhEEEeCCCCEEEeecCCCc-----------ceEC-CCCceeEEE
Confidence 431 2234567777777774 679999999999999999 7777777643211 1222 123556778
Q ss_pred EcCCCCEEEEecCCCCCCCCh------HHHHHHhhcC--C-------CHHHHHHHHHHHHHh
Q 024370 209 ELIEGDTIVMGSDGLFDNVFD------HEVVSMTTRF--I-------DVSEAGICSVFGSIY 255 (268)
Q Consensus 209 ~l~~gD~liL~SDGl~d~l~~------~ei~~~v~~~--~-------~~~~~a~~Lv~~A~~ 255 (268)
++.+||.|+|+||||.|.... +.+.+++.+. . ++++.++.+++.++.
T Consensus 176 ~l~~Gd~l~l~TDGl~e~~~~~~~~g~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 237 (399)
T 3ke6_A 176 VLNIGDAILFYTDGLIERPGRPLEASTAEFADLAASIASGSGGFVLDAPARPIDRLCSDTLE 237 (399)
T ss_dssp ECCTTCEEEEECTTTTSCTTCCHHHHHHHHHHHHHHHTC----------CCHHHHHHHHHHH
T ss_pred EECCCCEEEEECCCcccCCCCCcchhHHHHHHHHHHhhcccccccccChhhHHHHHHHHHHH
Confidence 999999999999999998765 5566666441 1 344555666666554
No 24
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A
Probab=98.91 E-value=6.6e-08 Score=87.44 Aligned_cols=158 Identities=12% Similarity=0.017 Sum_probs=90.4
Q ss_pred CCCCCceEEEeec-CC-eEEEEecCCCchhhccccHHHHHHHHHHHHhhhhhh-ccCcccHHHHHHHHHhcc--CCCCcc
Q 024370 69 ERGGEDAFFVSCY-NG-GVIAVADGVSGWAEQNVDPSLFSRELMANASYFVED-VEVNYDPQILMRKAHAAT--SSVGSA 143 (268)
Q Consensus 69 r~~neDa~~v~~~-~~-~~~~VaDG~Gg~~~~~~as~~~~~~l~~~~~~~~~~-~~~~~~~~~l~~~a~~~~--~~~~~g 143 (268)
...+.|.|-+.+. +. ..++|+|+.|..-.+...+..+...+...+...... ......+..+++..+... ...+..
T Consensus 187 ~~vgGD~yd~~~~~~~~~~~~i~Dv~GhGv~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~ln~~l~~~~~~~~ 266 (394)
T 3eq2_A 187 LYLSGDFVDYFRVDERRVAFYLADVSGHGASSAFVTVLLKFMTTRLLYESRRNGTLPEFKPSEVLAHINRGLINTKLGKH 266 (394)
T ss_dssp ---CCCEEECCEETTTEEEEEEEEESSCSTTTHHHHHHHHHHHHHHHHHSCSSCSSSSCCHHHHHHHHHHHHHHTTCCCC
T ss_pred hhcCccEEeEEEeCCCcEEEEEEECCCCChHHHHHHHHHHHHHHHHHHhhhccCCcccCCHHHHHHHHHHHHhccCcCcE
Confidence 5678999966543 33 489999998854433333333333333322221110 011235666666554321 223455
Q ss_pred ceEEEEEee--CCeEEEEEecCCe-eEEEECCeeEEeCccccccCCCCccccccccCC-ccccceEEEEEcCCCCEEEEe
Q 024370 144 TVIVAMLER--NGILKVASVGDCG-LRIIRKGQITFSSSPQEHYFDCPYQLSSEAVGQ-TYLDAMVTTVELIEGDTIVMG 219 (268)
Q Consensus 144 tt~~~~l~~--~~~l~ia~vGDsr-~~l~r~g~~~~lt~dh~~~~~~p~~l~~~~~g~-~~~~~~~~~~~l~~gD~liL~ 219 (268)
.|++++.++ .+++.+++.|... .++.++|++..+.... ..+|. .........+++.+||.|+|+
T Consensus 267 ~t~~~~~~d~~~~~l~~~~aGh~p~~~~~~~g~~~~l~~~~------------~plG~~~~~~~~~~~~~l~~gd~l~l~ 334 (394)
T 3eq2_A 267 VTMLGGVIDLEKNSLTYSIGGHLPLPVLFVEGQAGYLEGRG------------LPVGLFDDATYDDRVMELPPSFSLSLF 334 (394)
T ss_dssp EEEEEEEEETTTTEEEEEECSSSCCCEEEETTEEEECCCC--------------CCSCCCCC--CCEEEECCSSCEEEEC
T ss_pred EEEEEEEEECCCCEEEEEcCCCCCCcEEecCCceEecCCCC------------ceeEecCCCceEEEEEEeCCCCEEEEE
Confidence 677776664 6799999999865 6777899888765321 11222 334456778999999999999
Q ss_pred cCCCCCCCCh-------HHHHHHhhc
Q 024370 220 SDGLFDNVFD-------HEVVSMTTR 238 (268)
Q Consensus 220 SDGl~d~l~~-------~ei~~~v~~ 238 (268)
||||.|.... +.+.+++..
T Consensus 335 TDG~~e~~~~~~~~~~~~~l~~~l~~ 360 (394)
T 3eq2_A 335 SDGILDVLPGATLKEKEASLPEQVAA 360 (394)
T ss_dssp SSCCCC-----CCSTTTTTSHHHHHT
T ss_pred CCCcccccCcccchhhHHHHHHHHHh
Confidence 9999997543 445555554
Done!