Query 024372
Match_columns 268
No_of_seqs 136 out of 1748
Neff 10.2
Searched_HMMs 29240
Date Mon Mar 25 07:06:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024372.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024372hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ynn_A Coatomer subunit beta'; 100.0 3E-45 1E-49 305.1 36.3 257 6-266 3-266 (304)
2 1vyh_C Platelet-activating fac 100.0 3.2E-42 1.1E-46 298.4 36.0 251 10-266 102-376 (410)
3 4gqb_B Methylosome protein 50; 100.0 5.3E-42 1.8E-46 290.5 33.8 245 13-261 79-333 (344)
4 3frx_A Guanine nucleotide-bind 100.0 1.3E-41 4.5E-46 285.0 35.8 245 10-260 59-318 (319)
5 1vyh_C Platelet-activating fac 100.0 1.1E-41 3.6E-46 295.2 35.1 247 7-258 141-410 (410)
6 4ery_A WD repeat-containing pr 100.0 1.5E-40 5.1E-45 277.1 39.2 252 10-266 17-275 (312)
7 3iz6_a 40S ribosomal protein R 100.0 2.8E-41 9.7E-46 289.6 33.7 252 6-262 56-378 (380)
8 3ow8_A WD repeat-containing pr 100.0 9.8E-41 3.4E-45 280.1 34.2 251 13-266 29-286 (321)
9 3ow8_A WD repeat-containing pr 100.0 1.1E-40 3.8E-45 279.8 34.5 243 9-257 73-319 (321)
10 1got_B GT-beta; complex (GTP-b 100.0 2.5E-40 8.7E-45 279.5 36.8 251 9-266 48-308 (340)
11 2pbi_B Guanine nucleotide-bind 100.0 5.6E-40 1.9E-44 279.0 38.5 253 9-266 57-322 (354)
12 2ynn_A Coatomer subunit beta'; 100.0 2.2E-40 7.6E-45 275.7 35.2 250 7-260 46-303 (304)
13 3frx_A Guanine nucleotide-bind 100.0 3.2E-40 1.1E-44 276.6 36.4 251 8-264 9-272 (319)
14 2xzm_R RACK1; ribosome, transl 100.0 4.4E-40 1.5E-44 278.3 32.9 245 10-261 70-342 (343)
15 2pm7_B Protein transport prote 100.0 5.3E-40 1.8E-44 272.5 32.5 244 11-258 4-284 (297)
16 4g56_B MGC81050 protein; prote 100.0 3.6E-40 1.2E-44 280.6 31.9 244 12-259 90-343 (357)
17 1got_B GT-beta; complex (GTP-b 100.0 5.2E-39 1.8E-43 271.5 35.6 243 7-256 88-340 (340)
18 4gqb_B Methylosome protein 50; 100.0 1.3E-39 4.4E-44 275.9 29.8 245 14-264 28-294 (344)
19 2xzm_R RACK1; ribosome, transl 100.0 1.3E-38 4.5E-43 269.2 35.4 253 7-263 12-289 (343)
20 1erj_A Transcriptional repress 100.0 3E-38 1E-42 271.9 37.3 247 13-266 61-348 (393)
21 2hes_X YDR267CP; beta-propelle 100.0 8.3E-39 2.8E-43 269.2 32.1 243 14-259 56-328 (330)
22 4g56_B MGC81050 protein; prote 100.0 2.1E-39 7.1E-44 275.9 26.7 248 13-265 39-307 (357)
23 3fm0_A Protein CIAO1; WDR39,SG 100.0 2.8E-38 9.7E-43 267.6 33.4 206 6-215 5-223 (345)
24 3bg1_A Protein SEC13 homolog; 100.0 2.9E-39 9.9E-44 270.5 26.2 244 11-258 8-292 (316)
25 4aow_A Guanine nucleotide-bind 100.0 1.5E-37 5.3E-42 260.7 36.2 251 11-265 33-292 (340)
26 2hes_X YDR267CP; beta-propelle 100.0 5.6E-38 1.9E-42 264.2 33.3 249 5-261 3-282 (330)
27 1erj_A Transcriptional repress 100.0 6.5E-38 2.2E-42 269.8 34.4 240 17-260 124-390 (393)
28 1nr0_A Actin interacting prote 100.0 6.3E-38 2.1E-42 284.4 35.4 250 8-265 51-361 (611)
29 3dm0_A Maltose-binding peripla 100.0 6.3E-38 2.2E-42 288.2 35.6 243 10-258 424-692 (694)
30 2pbi_B Guanine nucleotide-bind 100.0 2.1E-37 7.3E-42 263.1 34.9 243 8-256 98-354 (354)
31 3dw8_B Serine/threonine-protei 100.0 9.5E-39 3.3E-43 278.0 27.1 246 14-264 26-378 (447)
32 3zwl_B Eukaryotic translation 100.0 1.1E-36 3.7E-41 257.7 38.7 256 6-266 22-311 (369)
33 3dm0_A Maltose-binding peripla 100.0 9.1E-38 3.1E-42 287.1 34.1 250 11-265 377-638 (694)
34 4ery_A WD repeat-containing pr 100.0 4.9E-37 1.7E-41 255.8 35.4 245 9-258 58-311 (312)
35 1nr0_A Actin interacting prote 100.0 9.5E-38 3.2E-42 283.2 33.2 245 13-265 15-276 (611)
36 3ei3_B DNA damage-binding prot 100.0 5.4E-37 1.8E-41 262.4 33.1 251 8-266 65-346 (383)
37 3f3f_A Nucleoporin SEH1; struc 100.0 1.9E-36 6.4E-41 253.5 34.1 252 11-266 6-344 (351)
38 1sq9_A Antiviral protein SKI8; 100.0 5.8E-37 2E-41 262.8 31.6 256 3-266 3-329 (397)
39 3jrp_A Fusion protein of prote 100.0 5.2E-37 1.8E-41 260.7 30.9 248 10-261 5-289 (379)
40 4aez_A CDC20, WD repeat-contai 100.0 3.3E-36 1.1E-40 259.6 35.7 245 14-265 132-386 (401)
41 1gxr_A ESG1, transducin-like e 100.0 7.6E-36 2.6E-40 249.6 34.8 252 7-265 42-302 (337)
42 4gga_A P55CDC, cell division c 100.0 1.5E-35 5.1E-40 257.1 37.6 249 7-261 138-397 (420)
43 4aow_A Guanine nucleotide-bind 100.0 1.2E-35 3.9E-40 249.2 35.7 247 10-262 80-340 (340)
44 3mkq_A Coatomer beta'-subunit; 100.0 2.7E-36 9.2E-41 281.0 34.6 256 7-266 4-266 (814)
45 4e54_B DNA damage-binding prot 100.0 3.9E-37 1.3E-41 268.3 26.9 250 12-266 115-394 (435)
46 3dwl_C Actin-related protein 2 100.0 1E-37 3.4E-42 266.1 21.6 247 6-258 1-280 (377)
47 2pm9_A Protein WEB1, protein t 100.0 1.6E-36 5.5E-41 261.4 27.7 250 9-262 60-340 (416)
48 2ymu_A WD-40 repeat protein; u 100.0 1.7E-35 5.6E-40 265.7 34.9 236 10-256 338-577 (577)
49 4a11_B DNA excision repair pro 100.0 2.6E-35 8.9E-40 252.6 34.2 253 9-265 36-371 (408)
50 1k8k_C P40, ARP2/3 complex 41 100.0 4.2E-36 1.4E-40 254.9 27.1 251 8-262 44-364 (372)
51 1k8k_C P40, ARP2/3 complex 41 100.0 1.3E-35 4.5E-40 251.8 29.9 244 10-259 2-274 (372)
52 3odt_A Protein DOA1; ubiquitin 100.0 5.1E-35 1.7E-39 242.4 32.3 247 7-266 9-262 (313)
53 3gre_A Serine/threonine-protei 100.0 5.2E-36 1.8E-40 260.6 27.2 247 13-266 60-366 (437)
54 2j04_B YDR362CP, TAU91; beta p 100.0 6.7E-37 2.3E-41 272.2 21.9 245 13-259 130-428 (524)
55 3vl1_A 26S proteasome regulato 100.0 7.2E-36 2.5E-40 257.9 27.7 246 9-259 132-419 (420)
56 1gxr_A ESG1, transducin-like e 100.0 2.9E-34 1E-38 240.0 36.6 237 14-257 95-335 (337)
57 3v7d_B Cell division control p 100.0 2.1E-34 7.1E-39 252.3 36.6 246 8-265 113-387 (464)
58 3k26_A Polycomb protein EED; W 100.0 4.2E-36 1.4E-40 254.0 24.8 241 15-259 68-366 (366)
59 1r5m_A SIR4-interacting protei 100.0 1.4E-34 4.7E-39 249.2 34.2 250 6-261 35-363 (425)
60 1sq9_A Antiviral protein SKI8; 100.0 2.4E-35 8.3E-40 252.7 29.1 247 8-261 54-397 (397)
61 3i2n_A WD repeat-containing pr 100.0 5.4E-35 1.9E-39 246.5 30.6 245 12-261 14-293 (357)
62 3zwl_B Eukaryotic translation 100.0 1.3E-34 4.3E-39 244.9 32.7 250 7-262 65-349 (369)
63 3vl1_A 26S proteasome regulato 100.0 5.4E-35 1.8E-39 252.5 30.9 237 18-260 98-366 (420)
64 2pm9_A Protein WEB1, protein t 100.0 4.4E-36 1.5E-40 258.6 24.1 250 8-261 105-416 (416)
65 3i2n_A WD repeat-containing pr 100.0 2.5E-35 8.5E-40 248.6 27.5 248 12-263 61-357 (357)
66 4ggc_A P55CDC, cell division c 100.0 1E-33 3.5E-38 235.2 36.7 250 6-261 57-317 (318)
67 1yfq_A Cell cycle arrest prote 100.0 5.3E-35 1.8E-39 245.6 29.1 245 12-266 7-289 (342)
68 1r5m_A SIR4-interacting protei 100.0 5.1E-34 1.8E-38 245.6 35.8 236 15-258 107-424 (425)
69 3ei3_B DNA damage-binding prot 100.0 6.8E-35 2.3E-39 249.4 29.9 239 13-259 115-382 (383)
70 2ymu_A WD-40 repeat protein; u 100.0 6.4E-34 2.2E-38 255.4 37.0 245 10-266 297-545 (577)
71 3odt_A Protein DOA1; ubiquitin 100.0 4.5E-34 1.5E-38 236.7 32.2 245 7-265 50-302 (313)
72 3v7d_B Cell division control p 100.0 9.4E-34 3.2E-38 248.1 35.2 248 7-265 153-427 (464)
73 2xyi_A Probable histone-bindin 100.0 3.3E-34 1.1E-38 249.4 31.9 247 10-259 122-410 (430)
74 3jro_A Fusion protein of prote 100.0 3E-35 1E-39 272.8 26.6 248 10-261 3-287 (753)
75 3mmy_A MRNA export factor; mRN 100.0 1.2E-34 4.3E-39 244.9 28.0 246 10-257 33-344 (368)
76 3dwl_C Actin-related protein 2 100.0 1.7E-35 5.8E-40 252.3 21.6 204 8-216 47-280 (377)
77 4e54_B DNA damage-binding prot 100.0 8.4E-35 2.9E-39 253.5 26.4 249 10-263 158-434 (435)
78 2aq5_A Coronin-1A; WD40 repeat 100.0 2.5E-34 8.4E-39 247.8 27.7 246 11-262 76-345 (402)
79 3k26_A Polycomb protein EED; W 100.0 2E-34 6.9E-39 243.6 24.8 246 12-262 14-321 (366)
80 1pgu_A Actin interacting prote 100.0 1.2E-33 4.2E-38 254.7 31.4 245 13-266 15-290 (615)
81 2oaj_A Protein SNI1; WD40 repe 100.0 9.9E-34 3.4E-38 266.8 32.0 240 12-257 13-310 (902)
82 3sfz_A APAF-1, apoptotic pepti 100.0 2.7E-33 9.1E-38 271.8 34.9 252 9-266 608-878 (1249)
83 2j04_B YDR362CP, TAU91; beta p 100.0 6E-34 2.1E-38 253.2 27.0 246 11-258 202-516 (524)
84 3iz6_a 40S ribosomal protein R 100.0 2.7E-34 9.4E-39 246.1 23.9 226 40-266 45-287 (380)
85 4aez_A CDC20, WD repeat-contai 100.0 1.1E-32 3.6E-37 237.7 33.5 243 14-265 89-342 (401)
86 4h5i_A Guanine nucleotide-exch 100.0 8.1E-34 2.8E-38 242.1 25.1 242 11-259 68-343 (365)
87 1p22_A F-BOX/WD-repeat protein 100.0 2.5E-32 8.7E-37 237.7 34.4 231 14-261 131-367 (435)
88 2pm7_B Protein transport prote 100.0 5.7E-33 2E-37 230.2 28.2 208 8-216 45-284 (297)
89 3gre_A Serine/threonine-protei 100.0 2.1E-33 7.1E-38 244.2 26.5 240 13-256 108-437 (437)
90 1pgu_A Actin interacting prote 100.0 1.2E-32 4E-37 248.3 31.9 254 7-266 54-335 (615)
91 2aq5_A Coronin-1A; WD40 repeat 100.0 4.9E-33 1.7E-37 239.7 28.0 238 18-261 36-301 (402)
92 2ovr_B FBW7, F-BOX/WD repeat p 100.0 6.8E-32 2.3E-36 235.5 35.0 244 6-266 108-355 (445)
93 3lrv_A PRE-mRNA-splicing facto 100.0 1.4E-33 4.9E-38 238.2 22.7 225 29-260 46-293 (343)
94 3dw8_B Serine/threonine-protei 100.0 1.1E-32 3.9E-37 239.6 29.0 243 8-258 73-445 (447)
95 1p22_A F-BOX/WD-repeat protein 100.0 2.4E-32 8.1E-37 237.9 30.7 241 5-263 162-418 (435)
96 2ovr_B FBW7, F-BOX/WD repeat p 100.0 8.8E-32 3E-36 234.7 34.3 242 7-266 150-398 (445)
97 1l0q_A Surface layer protein; 100.0 1.8E-31 6.3E-36 228.4 35.0 247 11-265 27-281 (391)
98 3mkq_A Coatomer beta'-subunit; 100.0 3.6E-32 1.2E-36 253.2 32.7 251 7-261 46-304 (814)
99 1yfq_A Cell cycle arrest prote 100.0 1E-31 3.5E-36 225.5 30.2 238 9-256 49-321 (342)
100 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2.7E-31 9.3E-36 232.2 32.8 239 16-260 4-342 (450)
101 3vu4_A KMHSV2; beta-propeller 100.0 2.3E-31 7.7E-36 226.1 30.3 242 12-261 15-338 (355)
102 2oaj_A Protein SNI1; WD40 repe 100.0 5.6E-33 1.9E-37 261.7 21.8 250 12-266 431-790 (902)
103 2vdu_B TRNA (guanine-N(7)-)-me 100.0 3E-31 1E-35 232.0 31.0 239 13-258 99-390 (450)
104 4gga_A P55CDC, cell division c 100.0 1.4E-30 4.6E-35 225.9 34.4 239 19-266 108-360 (420)
105 3sfz_A APAF-1, apoptotic pepti 100.0 3.4E-31 1.2E-35 257.1 33.6 207 6-216 647-912 (1249)
106 3fm0_A Protein CIAO1; WDR39,SG 100.0 2.9E-31 1E-35 224.5 28.7 212 7-222 96-340 (345)
107 3bg1_A Protein SEC13 homolog; 100.0 2.7E-32 9.1E-37 228.1 21.9 206 10-216 51-292 (316)
108 2j04_A TAU60, YPL007P, hypothe 100.0 9E-32 3.1E-36 236.5 26.0 232 15-258 14-296 (588)
109 4gq1_A NUP37; propeller, trans 100.0 8.1E-32 2.8E-36 231.8 23.1 227 29-257 99-387 (393)
110 4ggc_A P55CDC, cell division c 100.0 7.5E-30 2.6E-34 211.9 33.2 239 19-266 28-280 (318)
111 3bws_A Protein LP49; two-domai 100.0 4.4E-30 1.5E-34 222.6 32.4 240 13-258 166-431 (433)
112 4h5i_A Guanine nucleotide-exch 100.0 4.5E-31 1.6E-35 225.1 24.8 197 14-216 131-342 (365)
113 1l0q_A Surface layer protein; 100.0 3.3E-29 1.1E-33 214.4 33.2 232 31-266 2-240 (391)
114 3lrv_A PRE-mRNA-splicing facto 100.0 5.6E-30 1.9E-34 216.2 26.7 230 17-257 77-331 (343)
115 4a11_B DNA excision repair pro 100.0 1.7E-29 6E-34 216.3 29.7 240 14-259 97-405 (408)
116 3jrp_A Fusion protein of prote 100.0 1.3E-29 4.6E-34 215.0 28.1 210 7-217 46-287 (379)
117 3f3f_A Nucleoporin SEH1; struc 100.0 1.3E-29 4.6E-34 211.8 27.5 214 8-222 49-342 (351)
118 3bws_A Protein LP49; two-domai 100.0 7.2E-29 2.5E-33 215.0 32.7 245 16-266 122-397 (433)
119 2w18_A PALB2, fancn, partner a 100.0 4.7E-30 1.6E-34 213.1 23.6 173 40-215 156-355 (356)
120 4gq1_A NUP37; propeller, trans 100.0 1E-30 3.5E-35 225.0 19.9 206 12-218 132-390 (393)
121 2xyi_A Probable histone-bindin 100.0 3E-29 1E-33 218.2 29.3 209 6-217 171-410 (430)
122 2j04_A TAU60, YPL007P, hypothe 100.0 2.1E-30 7.2E-35 227.8 18.3 190 14-216 83-296 (588)
123 2w18_A PALB2, fancn, partner a 100.0 1.3E-28 4.4E-33 204.5 26.8 229 26-257 48-355 (356)
124 3mmy_A MRNA export factor; mRN 100.0 4.1E-28 1.4E-32 204.8 27.7 217 46-266 24-311 (368)
125 3jro_A Fusion protein of prote 100.0 1.8E-28 6.3E-33 227.3 22.3 211 6-217 43-285 (753)
126 2hqs_A Protein TOLB; TOLB, PAL 100.0 4.3E-26 1.5E-30 197.6 29.6 248 10-262 111-390 (415)
127 3vu4_A KMHSV2; beta-propeller 100.0 8.8E-27 3E-31 197.8 24.7 212 45-261 3-273 (355)
128 1nir_A Nitrite reductase; hemo 100.0 2.7E-25 9.4E-30 198.6 30.8 235 29-265 147-415 (543)
129 3u4y_A Uncharacterized protein 99.9 3.1E-24 1.1E-28 179.4 29.9 244 13-261 37-306 (331)
130 1nir_A Nitrite reductase; hemo 99.9 7.4E-24 2.5E-28 189.4 31.2 238 19-263 181-462 (543)
131 1ri6_A Putative isomerase YBHE 99.9 1.8E-23 6E-28 175.0 30.9 245 13-262 34-313 (343)
132 2hqs_A Protein TOLB; TOLB, PAL 99.9 2.2E-23 7.5E-28 180.5 32.3 223 8-238 170-408 (415)
133 1pby_B Quinohemoprotein amine 99.9 1.8E-23 6.3E-28 174.5 28.8 228 32-266 2-317 (337)
134 1jmx_B Amine dehydrogenase; ox 99.9 2.7E-23 9.3E-28 174.4 27.9 231 29-266 9-332 (349)
135 2ojh_A Uncharacterized protein 99.9 1.5E-23 5.1E-28 171.3 25.5 236 9-250 34-293 (297)
136 3u4y_A Uncharacterized protein 99.9 2.4E-22 8.2E-27 167.9 29.5 229 30-262 9-255 (331)
137 3vgz_A Uncharacterized protein 99.9 6.7E-22 2.3E-26 166.3 31.6 243 15-265 39-309 (353)
138 3hfq_A Uncharacterized protein 99.9 3.9E-22 1.3E-26 168.0 28.7 248 13-265 36-325 (347)
139 2ojh_A Uncharacterized protein 99.9 1.2E-22 4E-27 166.0 24.3 224 36-263 17-262 (297)
140 2ecf_A Dipeptidyl peptidase IV 99.9 8.4E-23 2.9E-27 188.6 24.9 235 16-258 36-366 (741)
141 3vgz_A Uncharacterized protein 99.9 7.5E-22 2.6E-26 166.0 28.6 227 16-247 88-332 (353)
142 1xfd_A DIP, dipeptidyl aminope 99.9 4E-22 1.4E-26 183.4 21.1 237 18-261 18-347 (723)
143 2ecf_A Dipeptidyl peptidase IV 99.9 5.4E-22 1.9E-26 183.2 21.6 236 18-261 110-416 (741)
144 3scy_A Hypothetical bacterial 99.9 1.8E-19 6.1E-24 152.6 34.2 245 15-265 48-345 (361)
145 2z3z_A Dipeptidyl aminopeptida 99.9 5.2E-21 1.8E-25 175.7 25.0 245 10-261 114-437 (706)
146 3o4h_A Acylamino-acid-releasin 99.9 3E-21 1E-25 173.7 21.4 235 15-263 20-278 (582)
147 2oit_A Nucleoporin 214KDA; NH2 99.9 7.7E-22 2.6E-26 171.8 16.0 196 15-218 35-279 (434)
148 1xfd_A DIP, dipeptidyl aminope 99.9 8.7E-21 3E-25 174.6 21.8 243 10-259 51-393 (723)
149 1jof_A Carboxy-CIS,CIS-muconat 99.9 1.5E-19 5E-24 153.7 26.7 241 15-260 38-342 (365)
150 2z3z_A Dipeptidyl aminopeptida 99.9 1.6E-20 5.5E-25 172.5 22.2 237 17-261 82-393 (706)
151 1ri6_A Putative isomerase YBHE 99.9 1.8E-19 6.2E-24 150.5 26.5 217 17-237 84-332 (343)
152 2oit_A Nucleoporin 214KDA; NH2 99.9 4.3E-21 1.5E-25 167.0 16.4 160 14-178 90-279 (434)
153 1z68_A Fibroblast activation p 99.9 5.6E-21 1.9E-25 176.0 15.7 236 21-262 20-349 (719)
154 1pby_B Quinohemoprotein amine 99.8 3.6E-19 1.2E-23 148.4 23.5 202 18-227 35-320 (337)
155 1k32_A Tricorn protease; prote 99.8 1E-19 3.5E-24 174.2 22.7 235 14-261 243-504 (1045)
156 1k32_A Tricorn protease; prote 99.8 4.7E-19 1.6E-23 169.6 26.2 240 11-263 198-465 (1045)
157 4a5s_A Dipeptidyl peptidase 4 99.8 1.6E-19 5.4E-24 167.1 22.2 242 16-264 16-358 (740)
158 1q7f_A NHL, brain tumor CG1071 99.8 1.5E-17 5.1E-22 136.2 30.5 238 14-263 27-284 (286)
159 1jmx_B Amine dehydrogenase; ox 99.8 1.5E-18 5.3E-23 145.3 22.9 200 18-227 44-335 (349)
160 3hfq_A Uncharacterized protein 99.8 8.6E-18 2.9E-22 141.4 26.8 206 13-221 82-323 (347)
161 3pe7_A Oligogalacturonate lyas 99.8 3E-18 1E-22 146.0 23.6 251 8-264 22-334 (388)
162 3fvz_A Peptidyl-glycine alpha- 99.8 4.9E-17 1.7E-21 136.2 30.2 236 16-258 23-321 (329)
163 3pe7_A Oligogalacturonate lyas 99.8 6.6E-18 2.2E-22 143.9 20.9 239 13-257 77-380 (388)
164 3o4h_A Acylamino-acid-releasin 99.8 5.3E-18 1.8E-22 152.6 19.6 198 60-263 20-231 (582)
165 3azo_A Aminopeptidase; POP fam 99.8 3.3E-17 1.1E-21 149.4 24.4 251 10-264 61-374 (662)
166 3scy_A Hypothetical bacterial 99.8 4.7E-16 1.6E-20 131.5 29.1 228 31-261 13-295 (361)
167 3e5z_A Putative gluconolactona 99.8 1.3E-15 4.5E-20 125.4 30.7 241 10-262 21-289 (296)
168 1z68_A Fibroblast activation p 99.8 8.5E-19 2.9E-23 161.4 12.3 231 18-259 61-391 (719)
169 3azo_A Aminopeptidase; POP fam 99.8 1.9E-16 6.3E-21 144.4 25.3 245 12-261 19-327 (662)
170 3c5m_A Oligogalacturonate lyas 99.8 2.2E-17 7.5E-22 140.7 17.7 237 19-262 38-332 (396)
171 2xdw_A Prolyl endopeptidase; a 99.8 1.3E-15 4.3E-20 140.3 29.7 241 15-261 123-416 (710)
172 2dg1_A DRP35, lactonase; beta 99.8 2.4E-14 8.2E-19 119.5 34.2 240 12-258 40-315 (333)
173 2oiz_A Aromatic amine dehydrog 99.8 2.9E-16 9.8E-21 133.4 22.4 243 12-265 47-342 (361)
174 3dsm_A Uncharacterized protein 99.8 9.9E-16 3.4E-20 128.3 25.3 237 18-266 45-308 (328)
175 1jof_A Carboxy-CIS,CIS-muconat 99.7 1.2E-15 4.1E-20 129.5 25.6 229 33-263 4-296 (365)
176 2dg1_A DRP35, lactonase; beta 99.7 9.1E-16 3.1E-20 128.2 24.4 239 17-265 6-268 (333)
177 3c5m_A Oligogalacturonate lyas 99.7 2.7E-16 9.3E-21 133.9 21.3 234 21-262 85-387 (396)
178 4a5s_A Dipeptidyl peptidase 4 99.7 5.4E-16 1.8E-20 143.5 20.8 246 11-262 51-403 (740)
179 1q7f_A NHL, brain tumor CG1071 99.7 1E-14 3.5E-19 119.2 25.2 195 15-217 75-280 (286)
180 3no2_A Uncharacterized protein 99.7 9.8E-15 3.3E-19 119.4 24.4 228 30-264 4-257 (276)
181 2bkl_A Prolyl endopeptidase; m 99.7 5.5E-15 1.9E-19 135.8 24.2 238 14-262 118-400 (695)
182 1rwi_B Serine/threonine-protei 99.7 3.4E-14 1.2E-18 114.9 26.3 238 18-262 25-267 (270)
183 1qks_A Cytochrome CD1 nitrite 99.7 2.8E-13 9.5E-18 121.3 32.5 228 30-259 166-421 (567)
184 2gop_A Trilobed protease; beta 99.7 2E-14 6.9E-19 120.5 23.7 224 18-262 60-333 (347)
185 3fvz_A Peptidyl-glycine alpha- 99.7 2.8E-13 9.6E-18 113.3 29.6 205 61-266 23-284 (329)
186 3dsm_A Uncharacterized protein 99.7 2.8E-14 9.6E-19 119.5 23.0 219 38-263 14-257 (328)
187 1pjx_A Dfpase, DIISOPROPYLFLUO 99.7 6.6E-13 2.3E-17 109.6 30.3 237 14-259 15-299 (314)
188 2mad_H Methylamine dehydrogena 99.7 7.5E-13 2.6E-17 112.7 31.1 227 29-265 30-356 (373)
189 2z2n_A Virginiamycin B lyase; 99.6 7.2E-12 2.5E-16 102.3 33.9 237 13-262 11-257 (299)
190 2oiz_A Aromatic amine dehydrog 99.6 9.2E-14 3.1E-18 117.9 22.7 233 29-266 13-302 (361)
191 2gop_A Trilobed protease; beta 99.6 6.7E-14 2.3E-18 117.3 21.6 221 17-264 15-296 (347)
192 3no2_A Uncharacterized protein 99.6 1.9E-13 6.4E-18 111.7 22.1 188 73-266 5-202 (276)
193 2bkl_A Prolyl endopeptidase; m 99.6 3.1E-13 1.1E-17 124.1 24.5 232 29-263 77-354 (695)
194 1yr2_A Prolyl oligopeptidase; 99.6 5.8E-13 2E-17 123.2 25.6 242 14-262 160-444 (741)
195 2z2n_A Virginiamycin B lyase; 99.6 3.8E-11 1.3E-15 97.9 33.2 233 15-261 55-297 (299)
196 3e5z_A Putative gluconolactona 99.6 1.4E-12 4.8E-17 107.1 24.0 200 12-219 64-288 (296)
197 2xdw_A Prolyl endopeptidase; a 99.6 6.5E-13 2.2E-17 122.3 22.3 234 29-264 81-373 (710)
198 3hrp_A Uncharacterized protein 99.5 1.7E-11 5.9E-16 105.6 28.8 233 17-257 131-408 (409)
199 3iuj_A Prolyl endopeptidase; h 99.5 5.4E-12 1.8E-16 115.9 26.6 239 14-262 126-408 (693)
200 1qks_A Cytochrome CD1 nitrite 99.5 1.3E-11 4.5E-16 110.4 28.4 192 71-265 165-379 (567)
201 3sjl_D Methylamine dehydrogena 99.5 2.7E-12 9.4E-17 108.8 21.9 239 21-266 82-370 (386)
202 2qc5_A Streptogramin B lactona 99.5 4.2E-10 1.4E-14 91.7 34.0 237 14-262 17-262 (300)
203 3g4e_A Regucalcin; six bladed 99.5 1.1E-10 3.9E-15 96.0 29.8 226 15-247 11-261 (297)
204 1rwi_B Serine/threonine-protei 99.5 6.2E-12 2.1E-16 101.5 21.6 198 15-219 65-266 (270)
205 3dr2_A Exported gluconolactona 99.5 7.5E-11 2.6E-15 97.4 26.5 234 10-256 38-303 (305)
206 2qc5_A Streptogramin B lactona 99.4 1.8E-09 6.2E-14 87.9 32.5 231 15-258 60-299 (300)
207 1yr2_A Prolyl oligopeptidase; 99.4 3.8E-11 1.3E-15 111.0 24.9 231 29-263 116-398 (741)
208 3sjl_D Methylamine dehydrogena 99.4 3.4E-11 1.2E-15 102.1 21.8 230 29-265 42-326 (386)
209 1xip_A Nucleoporin NUP159; bet 99.4 4.4E-12 1.5E-16 107.9 16.2 168 18-204 39-230 (388)
210 2mad_H Methylamine dehydrogena 99.4 6.4E-10 2.2E-14 94.6 29.6 199 21-223 70-356 (373)
211 3c75_H MADH, methylamine dehyd 99.4 2.1E-11 7.2E-16 105.0 19.8 232 29-265 82-408 (426)
212 2ghs_A AGR_C_1268P; regucalcin 99.4 1.7E-09 6E-14 90.1 30.5 220 19-249 51-293 (326)
213 1xip_A Nucleoporin NUP159; bet 99.4 9.8E-12 3.4E-16 105.7 16.8 169 63-245 39-230 (388)
214 1mda_H Methylamine dehydrogena 99.4 4.9E-11 1.7E-15 101.0 18.0 226 33-266 34-353 (368)
215 3hrp_A Uncharacterized protein 99.3 1.9E-09 6.7E-14 92.7 26.8 197 62-264 131-359 (409)
216 1pjx_A Dfpase, DIISOPROPYLFLUO 99.3 4.7E-10 1.6E-14 92.3 22.0 196 15-217 69-299 (314)
217 2hz6_A Endoplasmic reticulum t 99.3 1.6E-12 5.5E-17 110.6 7.0 192 30-231 8-206 (369)
218 1kb0_A Quinohemoprotein alcoho 99.3 6.3E-10 2.2E-14 101.8 23.4 233 31-266 128-514 (677)
219 3c75_H MADH, methylamine dehyd 99.3 7.1E-10 2.4E-14 95.5 21.9 201 21-224 122-409 (426)
220 1yiq_A Quinohemoprotein alcoho 99.3 1.9E-09 6.4E-14 98.9 24.9 235 31-266 121-512 (689)
221 1mda_H Methylamine dehydrogena 99.2 3.5E-10 1.2E-14 95.8 17.0 218 10-236 60-365 (368)
222 3iuj_A Prolyl endopeptidase; h 99.2 1.9E-09 6.4E-14 99.0 22.4 199 59-261 126-361 (693)
223 2hz6_A Endoplasmic reticulum t 99.2 3.8E-12 1.3E-16 108.2 3.6 188 72-265 8-198 (369)
224 3g4e_A Regucalcin; six bladed 99.2 2.3E-08 8E-13 82.0 25.9 198 63-265 14-235 (297)
225 2ece_A 462AA long hypothetical 99.2 2.9E-08 9.8E-13 85.2 25.0 216 29-247 93-399 (462)
226 2qe8_A Uncharacterized protein 99.2 1.3E-08 4.6E-13 85.3 22.6 227 17-249 17-311 (343)
227 3q7m_A Lipoprotein YFGL, BAMB; 99.2 1.6E-08 5.5E-13 85.6 23.0 225 31-265 103-343 (376)
228 3q7m_A Lipoprotein YFGL, BAMB; 99.2 1.3E-08 4.4E-13 86.2 22.2 222 31-265 53-302 (376)
229 1fwx_A Nitrous oxide reductase 99.2 1.2E-08 4.1E-13 90.4 22.4 240 21-262 91-434 (595)
230 2qe8_A Uncharacterized protein 99.1 1.7E-08 6E-13 84.6 21.9 199 62-263 17-282 (343)
231 1npe_A Nidogen, entactin; glyc 99.1 1E-06 3.5E-11 70.9 30.9 201 62-266 36-245 (267)
232 2ghs_A AGR_C_1268P; regucalcin 99.1 8.1E-08 2.8E-12 79.9 24.3 193 65-265 52-265 (326)
233 3dr2_A Exported gluconolactona 99.1 3E-08 1E-12 81.6 21.1 193 12-214 81-303 (305)
234 2iwa_A Glutamine cyclotransfer 99.1 1.4E-07 4.9E-12 75.9 23.5 202 51-260 9-238 (266)
235 1npe_A Nidogen, entactin; glyc 99.1 2E-06 6.7E-11 69.2 30.0 217 17-237 36-260 (267)
236 2iwa_A Glutamine cyclotransfer 99.0 2.1E-07 7.2E-12 74.9 22.7 197 14-217 16-237 (266)
237 3nol_A Glutamine cyclotransfer 99.0 1.2E-07 4.2E-12 75.6 20.0 183 14-205 38-242 (262)
238 1yiq_A Quinohemoprotein alcoho 99.0 6.6E-08 2.3E-12 88.6 21.1 205 40-245 182-534 (689)
239 2ad6_A Methanol dehydrogenase 99.0 2E-07 6.8E-12 83.6 23.4 233 31-266 115-501 (571)
240 2fp8_A Strictosidine synthase; 99.0 4.1E-06 1.4E-10 69.3 29.0 238 13-261 15-315 (322)
241 1kb0_A Quinohemoprotein alcoho 98.9 3E-07 1E-11 84.1 23.3 205 40-245 189-536 (677)
242 3nol_A Glutamine cyclotransfer 98.9 5.5E-07 1.9E-11 71.8 21.7 188 52-247 32-244 (262)
243 1kv9_A Type II quinohemoprotei 98.9 4.3E-07 1.5E-11 83.0 24.1 234 31-266 117-495 (668)
244 3nok_A Glutaminyl cyclase; bet 98.9 6.8E-07 2.3E-11 71.4 22.1 177 18-205 56-253 (268)
245 2ece_A 462AA long hypothetical 98.9 1.2E-07 4.2E-12 81.3 18.8 177 29-206 147-399 (462)
246 3hxj_A Pyrrolo-quinoline quino 98.9 6E-07 2.1E-11 74.0 21.9 213 32-258 108-323 (330)
247 3mbr_X Glutamine cyclotransfer 98.9 1.9E-06 6.5E-11 68.1 22.6 182 14-204 16-220 (243)
248 1w6s_A Methanol dehydrogenase 98.9 9.9E-07 3.4E-11 79.3 23.2 230 34-266 124-510 (599)
249 3hxj_A Pyrrolo-quinoline quino 98.8 1.4E-07 4.7E-12 77.9 15.7 217 30-265 70-289 (330)
250 3nok_A Glutaminyl cyclase; bet 98.8 1.8E-06 6.3E-11 68.9 19.5 186 52-247 44-254 (268)
251 1flg_A Protein (quinoprotein e 98.8 3.8E-06 1.3E-10 75.5 24.0 232 31-266 117-523 (582)
252 3qqz_A Putative uncharacterize 98.8 3.6E-05 1.2E-09 61.5 27.1 200 12-215 22-251 (255)
253 3mbr_X Glutamine cyclotransfer 98.7 1.2E-05 4E-10 63.6 20.9 188 52-247 10-223 (243)
254 2xe4_A Oligopeptidase B; hydro 98.7 7.6E-06 2.6E-10 75.8 23.0 237 18-262 175-461 (751)
255 1fwx_A Nitrous oxide reductase 98.7 9.2E-07 3.1E-11 78.4 15.9 186 71-259 99-361 (595)
256 2p4o_A Hypothetical protein; p 98.6 5.8E-05 2E-09 61.9 24.1 223 17-247 32-277 (306)
257 4a2l_A BT_4663, two-component 98.6 0.00023 7.9E-09 66.2 30.8 231 19-262 175-439 (795)
258 1kv9_A Type II quinohemoprotei 98.6 6.4E-06 2.2E-10 75.2 19.9 190 40-229 177-500 (668)
259 2p4o_A Hypothetical protein; p 98.5 0.00035 1.2E-08 57.2 28.0 204 51-262 22-244 (306)
260 4hw6_A Hypothetical protein, I 98.5 0.00036 1.2E-08 60.3 26.9 236 18-257 140-431 (433)
261 4a2l_A BT_4663, two-component 98.5 0.00096 3.3E-08 62.0 33.1 232 16-262 214-483 (795)
262 1k3i_A Galactose oxidase precu 98.4 4.4E-05 1.5E-09 69.6 21.1 111 21-133 190-323 (656)
263 3v65_B Low-density lipoprotein 98.4 0.00062 2.1E-08 57.8 28.1 205 18-225 117-326 (386)
264 2fp8_A Strictosidine synthase; 98.4 0.00011 3.9E-09 60.5 21.6 195 64-265 21-274 (322)
265 2ad6_A Methanol dehydrogenase 98.4 8.6E-05 2.9E-09 66.5 21.2 160 84-245 273-523 (571)
266 3v65_B Low-density lipoprotein 98.4 0.00086 2.9E-08 56.9 28.9 223 39-265 94-324 (386)
267 2xe4_A Oligopeptidase B; hydro 98.3 8.4E-05 2.9E-09 68.8 20.4 194 63-257 175-398 (751)
268 1flg_A Protein (quinoprotein e 98.3 0.00077 2.6E-08 60.4 24.7 78 167-245 465-545 (582)
269 3v64_C Agrin; beta propeller, 98.2 0.0015 5.2E-08 54.6 28.2 199 19-221 75-279 (349)
270 3tc9_A Hypothetical hydrolase; 98.2 0.0019 6.4E-08 55.7 26.3 235 18-257 138-428 (430)
271 1ijq_A LDL receptor, low-densi 98.2 0.0016 5.4E-08 53.6 31.0 219 41-265 10-244 (316)
272 3v9f_A Two-component system se 98.2 0.0024 8.3E-08 59.2 27.2 232 16-261 312-570 (781)
273 3p5b_L Low density lipoprotein 98.1 0.0027 9.4E-08 54.1 30.5 223 39-265 90-326 (400)
274 3v64_C Agrin; beta propeller, 98.1 0.0024 8.4E-08 53.3 31.1 223 39-265 51-281 (349)
275 3tc9_A Hypothetical hydrolase; 98.1 0.00077 2.6E-08 58.1 21.4 151 64-216 139-300 (430)
276 1ijq_A LDL receptor, low-densi 98.1 0.0024 8.3E-08 52.5 28.7 205 16-224 29-245 (316)
277 3amr_A 3-phytase; beta-propell 98.1 0.0013 4.3E-08 54.8 21.4 190 75-266 42-271 (355)
278 4hw6_A Hypothetical protein, I 98.1 0.0034 1.1E-07 54.2 24.0 197 64-263 141-377 (433)
279 3sov_A LRP-6, low-density lipo 98.1 0.0033 1.1E-07 51.8 27.2 204 18-224 36-245 (318)
280 3m0c_C LDL receptor, low-densi 98.0 0.0086 2.9E-07 55.6 30.8 224 38-265 401-638 (791)
281 2xbg_A YCF48-like protein; pho 98.0 0.0043 1.5E-07 51.3 27.0 228 16-256 79-319 (327)
282 1w6s_A Methanol dehydrogenase 98.0 0.00071 2.4E-08 60.8 18.3 190 74-265 63-348 (599)
283 3v9f_A Two-component system se 97.9 0.013 4.5E-07 54.2 31.8 234 17-261 258-526 (781)
284 3p5b_L Low density lipoprotein 97.9 0.0076 2.6E-07 51.3 30.9 206 16-224 111-327 (400)
285 1k3i_A Galactose oxidase precu 97.9 0.00071 2.4E-08 61.5 17.5 196 66-262 190-444 (656)
286 1n7d_A LDL receptor, low-densi 97.9 0.00026 8.8E-09 65.0 14.6 205 18-225 407-622 (699)
287 3sov_A LRP-6, low-density lipo 97.9 0.0077 2.6E-07 49.6 27.4 222 40-265 12-244 (318)
288 3kya_A Putative phosphatase; s 97.9 0.0077 2.6E-07 52.6 22.6 198 64-263 141-413 (496)
289 1n7d_A LDL receptor, low-densi 97.8 0.00027 9.2E-09 64.8 13.9 224 39-266 384-621 (699)
290 2vpj_A Kelch-like protein 12; 97.8 0.005 1.7E-07 49.9 20.3 225 30-262 14-281 (301)
291 3amr_A 3-phytase; beta-propell 97.8 0.0097 3.3E-07 49.5 23.4 196 25-226 34-273 (355)
292 4a0p_A LRP6, LRP-6, low-densit 97.8 0.021 7.2E-07 51.6 31.2 223 39-265 13-243 (628)
293 2xbg_A YCF48-like protein; pho 97.8 0.012 4.2E-07 48.4 23.4 188 17-214 122-319 (327)
294 3kya_A Putative phosphatase; s 97.7 0.02 7E-07 50.0 27.0 240 19-261 141-477 (496)
295 3m0c_C LDL receptor, low-densi 97.6 0.043 1.5E-06 51.0 28.6 201 16-219 423-634 (791)
296 2xn4_A Kelch-like protein 2; s 97.5 0.019 6.5E-07 46.4 18.8 222 31-262 16-279 (302)
297 4a0p_A LRP6, LRP-6, low-densit 97.5 0.054 1.8E-06 48.9 27.4 197 17-218 37-238 (628)
298 3ii7_A Kelch-like protein 7; p 97.5 0.019 6.7E-07 46.5 18.5 220 32-262 13-275 (306)
299 1zgk_A Kelch-like ECH-associat 97.4 0.015 5.2E-07 47.3 17.3 225 29-262 23-290 (308)
300 3s94_A LRP-6, low-density lipo 97.3 0.1 3.4E-06 47.1 23.3 198 18-218 41-244 (619)
301 4asc_A Kelch repeat and BTB do 97.1 0.085 2.9E-06 42.9 18.6 219 34-262 8-280 (315)
302 3s94_A LRP-6, low-density lipo 97.0 0.18 6.2E-06 45.4 27.0 201 62-265 40-249 (619)
303 2woz_A Kelch repeat and BTB do 97.0 0.097 3.3E-06 42.6 18.0 220 33-262 18-290 (318)
304 3qqz_A Putative uncharacterize 97.0 0.096 3.3E-06 41.6 27.4 198 56-257 21-251 (255)
305 2p9w_A MAL S 1 allergenic prot 96.9 0.14 4.8E-06 42.1 23.7 195 21-220 17-268 (334)
306 2be1_A Serine/threonine-protei 96.6 0.055 1.9E-06 44.9 13.6 107 32-138 11-135 (339)
307 2uvk_A YJHT; unknown function, 96.3 0.21 7.2E-06 41.2 15.3 55 209-265 286-348 (357)
308 2p9w_A MAL S 1 allergenic prot 96.2 0.39 1.3E-05 39.5 20.5 150 66-217 17-215 (334)
309 3pbp_A Nucleoporin NUP82; beta 95.9 0.53 1.8E-05 40.1 15.9 102 30-133 31-158 (452)
310 2ism_A Putative oxidoreductase 95.8 0.67 2.3E-05 38.4 17.9 139 63-205 32-220 (352)
311 3sre_A PON1, serum paraoxonase 95.7 0.73 2.5E-05 38.4 20.9 180 65-247 53-285 (355)
312 3ei3_A DNA damage-binding prot 95.6 1.8 6E-05 42.1 29.2 242 16-261 553-875 (1158)
313 3sre_A PON1, serum paraoxonase 95.6 0.81 2.8E-05 38.1 18.1 134 122-258 81-251 (355)
314 2ism_A Putative oxidoreductase 95.6 0.8 2.8E-05 37.9 27.1 98 18-121 32-153 (352)
315 2vpj_A Kelch-like protein 12; 95.5 0.75 2.6E-05 36.7 18.2 145 113-263 62-235 (301)
316 3ii7_A Kelch-like protein 7; p 95.3 0.86 2.9E-05 36.5 16.9 181 74-262 13-228 (306)
317 2be1_A Serine/threonine-protei 95.1 0.086 3E-06 43.7 8.3 107 160-266 12-137 (339)
318 2xn4_A Kelch-like protein 2; s 95.1 1 3.4E-05 36.0 15.6 143 113-262 61-232 (302)
319 2g8s_A Glucose/sorbosone dehyd 95.0 1.3 4.3E-05 36.8 15.3 140 105-245 20-214 (353)
320 2zwa_A Leucine carboxyl methyl 95.0 1.3 4.6E-05 40.3 16.6 191 30-220 397-638 (695)
321 3pbp_A Nucleoporin NUP82; beta 94.9 0.84 2.9E-05 38.9 13.7 103 155-259 30-158 (452)
322 3a9g_A Putative uncharacterize 94.6 1.6 5.6E-05 36.1 14.9 140 104-245 30-214 (354)
323 1tl2_A L10, protein (tachylect 94.1 1.6 5.4E-05 33.8 14.9 136 63-205 42-199 (236)
324 1zgk_A Kelch-like ECH-associat 93.5 2.4 8.3E-05 33.9 15.6 182 30-219 70-289 (308)
325 4asc_A Kelch repeat and BTB do 93.3 2.7 9.1E-05 33.8 16.4 177 76-262 8-224 (315)
326 1tl2_A L10, protein (tachylect 92.7 2.7 9.3E-05 32.5 12.8 103 17-129 41-159 (236)
327 3ei3_A DNA damage-binding prot 92.7 7.9 0.00027 37.6 30.0 202 33-238 525-747 (1158)
328 3sbq_A Nitrous-oxide reductase 92.1 1.9 6.4E-05 38.2 11.3 99 105-205 325-452 (638)
329 2uvk_A YJHT; unknown function, 91.6 2.5 8.5E-05 34.6 11.6 92 168-261 168-296 (357)
330 2xzh_A Clathrin heavy chain 1; 91.1 5.7 0.00019 32.8 24.7 191 30-227 77-300 (365)
331 3das_A Putative oxidoreductase 90.5 6.5 0.00022 32.5 17.0 147 56-205 26-219 (347)
332 3a9g_A Putative uncharacterize 89.7 7.6 0.00026 32.0 26.0 222 17-247 29-330 (354)
333 1cru_A Protein (soluble quinop 89.7 9.1 0.00031 32.8 20.2 101 104-204 28-160 (454)
334 2zwa_A Leucine carboxyl methyl 89.6 12 0.00041 34.1 17.2 190 71-262 396-638 (695)
335 2g8s_A Glucose/sorbosone dehyd 89.5 7.8 0.00027 31.9 25.3 222 18-245 19-339 (353)
336 1bpo_A Protein (clathrin); cla 89.4 9.7 0.00033 32.7 26.3 190 31-228 77-300 (494)
337 2xzh_A Clathrin heavy chain 1; 89.0 8.7 0.0003 31.7 26.2 213 42-265 50-296 (365)
338 4hvt_A Ritya.17583.B, post-pro 88.6 14 0.00049 33.7 21.3 230 28-261 138-431 (711)
339 1xi4_A Clathrin heavy chain; a 88.0 20 0.00067 35.8 15.5 213 42-264 49-294 (1630)
340 2woz_A Kelch repeat and BTB do 88.0 9 0.00031 30.6 17.2 180 76-262 19-234 (318)
341 1bpo_A Protein (clathrin); cla 87.2 14 0.00046 31.9 25.2 214 42-265 49-295 (494)
342 1cru_A Protein (soluble quinop 87.0 14 0.00047 31.7 20.7 102 63-164 28-162 (454)
343 4gq2_M Nucleoporin NUP120; bet 85.1 9.1 0.00031 36.3 11.7 37 63-99 237-273 (950)
344 3sbq_A Nitrous-oxide reductase 77.7 7.3 0.00025 34.6 7.4 89 169-258 299-407 (638)
345 4gq2_M Nucleoporin NUP120; bet 75.1 57 0.002 30.9 17.2 70 189-258 237-316 (950)
346 1xi4_A Clathrin heavy chain; a 74.7 74 0.0025 31.9 18.4 187 30-223 76-295 (1630)
347 4fhn_B Nucleoporin NUP120; pro 70.3 13 0.00044 36.1 8.0 28 239-266 248-275 (1139)
348 4fhn_B Nucleoporin NUP120; pro 64.4 5.4 0.00018 38.7 4.0 37 64-100 240-276 (1139)
349 3qhy_B Beta-lactamase inhibito 62.1 56 0.0019 25.7 20.0 216 18-257 25-244 (282)
350 3f7f_A Nucleoporin NUP120; nuc 61.8 11 0.00039 34.3 5.3 30 30-59 230-259 (729)
351 2wg3_C Hedgehog-interacting pr 61.5 77 0.0026 27.1 13.3 100 105-204 16-155 (463)
352 3s25_A Hypothetical 7-bladed b 59.6 65 0.0022 25.7 20.5 136 69-217 60-216 (302)
353 3f7f_A Nucleoporin NUP120; nuc 59.2 15 0.00052 33.5 5.7 29 72-100 230-258 (729)
354 3qhy_B Beta-lactamase inhibito 58.7 65 0.0022 25.3 17.6 181 18-218 64-247 (282)
355 2wg3_C Hedgehog-interacting pr 57.9 90 0.0031 26.7 13.2 102 18-122 15-158 (463)
356 3ott_A Two-component system se 49.7 1.5E+02 0.0051 26.8 30.3 223 18-258 192-447 (758)
357 3ott_A Two-component system se 38.1 2.3E+02 0.0078 25.6 33.0 233 18-263 233-506 (758)
358 4a9v_A PHOX; hydrolase, beta-p 37.0 1.6E+02 0.0056 26.1 8.5 57 148-204 478-547 (592)
359 3das_A Putative oxidoreductase 33.0 2E+02 0.0069 23.5 28.1 104 15-121 30-158 (347)
360 3zwu_A Alkaline phosphatase PH 31.7 1.9E+02 0.0065 25.7 8.2 54 21-77 480-546 (592)
361 3zwu_A Alkaline phosphatase PH 31.1 1.5E+02 0.0053 26.3 7.5 58 106-163 479-548 (592)
362 3s25_A Hypothetical 7-bladed b 28.4 2.2E+02 0.0075 22.5 18.4 139 110-261 60-218 (302)
363 4a9v_A PHOX; hydrolase, beta-p 23.9 3.9E+02 0.013 23.8 8.8 58 188-245 476-548 (592)
364 3uc1_A DNA gyrase subunit A; D 23.5 2.9E+02 0.0099 22.2 18.1 116 16-132 94-227 (327)
365 1q47_A Semaphorin 3A; beta pro 21.7 2.5E+02 0.0085 24.3 7.0 70 18-87 405-487 (495)
366 3q6k_A 43.2 kDa salivary prote 21.3 3.5E+02 0.012 22.4 17.1 135 125-259 124-306 (381)
No 1
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=3e-45 Score=305.12 Aligned_cols=257 Identities=19% Similarity=0.228 Sum_probs=222.9
Q ss_pred eeecEEeeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCCCcE
Q 024372 6 VAVPLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTA 85 (268)
Q Consensus 6 ~~~~~~~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v 85 (268)
+.....+.+|++.|.+++|+| +|++|++|+.|++|++||..+++.+..+.+|..+|.+++|+|++.++++|+.|++|
T Consensus 3 l~~~~~~~~h~~~V~~~~fsp---~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i 79 (304)
T 2ynn_A 3 LDIKKTFSNRSDRVKGIDFHP---TEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRI 79 (304)
T ss_dssp CCCEEEEEEECSCEEEEEECS---SSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEE
T ss_pred ceeEEeecCCCCceEEEEECC---CCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEE
Confidence 344556789999999999995 89999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCeeeeec-cCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEe
Q 024372 86 KLWDALTGDEKHSFE-HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSC 164 (268)
Q Consensus 86 ~iw~~~~~~~~~~~~-~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 164 (268)
++||+.+++....+. |...|.+++|+|++++|++|+.|++|++||++.+......+..|...|.+++|+|.++.+++++
T Consensus 80 ~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg 159 (304)
T 2ynn_A 80 RVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASG 159 (304)
T ss_dssp EEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEE
T ss_pred EEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEE
Confidence 999999999887775 8899999999999999999999999999999765444455667888999999999777788888
Q ss_pred eCCCeEEEEeCCCCceEEeec--CCCCEEEEEECC--CCcEEEE-eCCCeEEEEeCCCceeeeEEeCCCCc-eeeEEcCC
Q 024372 165 TDSGGVRLWDARSGKIVQTLE--TKSPVTSAEVSR--DGRYITT-ADGSSVKFWDANHFGLVKGYNMPCNT-ESASLEPK 238 (268)
Q Consensus 165 ~~d~~i~iwd~~~~~~~~~~~--~~~~v~~~~~s~--~g~~l~~-~~~~~v~~wd~~~~~~~~~~~~~~~~-~~~~~~~~ 238 (268)
+.|++|++||+++++....+. +...+..+.++| ++.++++ +.|+.|++||+++.+++..+..+... ..+.++|
T Consensus 160 s~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p- 238 (304)
T 2ynn_A 160 CLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHP- 238 (304)
T ss_dssp ETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECS-
T ss_pred eCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECC-
Confidence 999999999999887665553 335688899986 6677665 57899999999999999888876554 4555666
Q ss_pred CCCEEEeccCCCeEEEEECCCCcEEeec
Q 024372 239 LGNIFIAGGEDMWVHVFDFHTGEQIAIT 266 (268)
Q Consensus 239 ~~~~~~~gs~d~~i~~wd~~~g~~~~~~ 266 (268)
++.+|++|+.|+.|++||+.+++.+..+
T Consensus 239 ~~~~l~s~s~Dg~i~iWd~~~~~~~~~~ 266 (304)
T 2ynn_A 239 TLPIIISGSEDGTLKIWNSSTYKVEKTL 266 (304)
T ss_dssp SSSEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred CCCEEEEEcCCCeEEEEECCCCceeeec
Confidence 6899999999999999999999887654
No 2
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=3.2e-42 Score=298.44 Aligned_cols=251 Identities=20% Similarity=0.338 Sum_probs=218.8
Q ss_pred EEeeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCCCcEEEEe
Q 024372 10 LVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWD 89 (268)
Q Consensus 10 ~~~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw~ 89 (268)
..+.+|.++|++++|+| ++.+|++|+.|++|++||..+++++.++.+|.+.|.+++|+|++.++++|+.|++|++||
T Consensus 102 ~~l~gh~~~V~~~~~~p---~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd 178 (410)
T 1vyh_C 102 YALSGHRSPVTRVIFHP---VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWD 178 (410)
T ss_dssp CEEECCSSCEEEEEECS---SSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEE
T ss_pred EeecccCCcEEEEEEcC---CCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEe
Confidence 45679999999999995 889999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCeeeeec-cCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEeeCCC
Q 024372 90 ALTGDEKHSFE-HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSG 168 (268)
Q Consensus 90 ~~~~~~~~~~~-~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~ 168 (268)
+.++.+...+. |...|.+++|+|+++.|++|+.|+.|++||++++.. ...+..|...+.++.+++++. ++++++.|+
T Consensus 179 ~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~-~~~~~~h~~~v~~~~~~~~g~-~l~s~s~D~ 256 (410)
T 1vyh_C 179 FQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYC-VKTFTGHREWVRMVRPNQDGT-LIASCSNDQ 256 (410)
T ss_dssp TTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCE-EEEEECCSSCEEEEEECTTSS-EEEEEETTS
T ss_pred CCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcE-EEEEeCCCccEEEEEECCCCC-EEEEEcCCC
Confidence 99988877764 888999999999999999999999999999987643 345567888999999987664 666778889
Q ss_pred eEEEEeCCCCceEEeecC-CCCEEEEEECCC--------------------CcEEEE-eCCCeEEEEeCCCceeeeEEeC
Q 024372 169 GVRLWDARSGKIVQTLET-KSPVTSAEVSRD--------------------GRYITT-ADGSSVKFWDANHFGLVKGYNM 226 (268)
Q Consensus 169 ~i~iwd~~~~~~~~~~~~-~~~v~~~~~s~~--------------------g~~l~~-~~~~~v~~wd~~~~~~~~~~~~ 226 (268)
+|++||++++++...+.. ...+.+++|+|+ |.++++ +.|+.|++||+++..++..+..
T Consensus 257 ~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~ 336 (410)
T 1vyh_C 257 TVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVG 336 (410)
T ss_dssp CEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred eEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEEC
Confidence 999999999999888864 456999999996 556655 5789999999999988888876
Q ss_pred CCCc-eeeEEcCCCCCEEEeccCCCeEEEEECCCCcEEeec
Q 024372 227 PCNT-ESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIAIT 266 (268)
Q Consensus 227 ~~~~-~~~~~~~~~~~~~~~gs~d~~i~~wd~~~g~~~~~~ 266 (268)
+... ..+.+++ ++++|++|+.|+.|++||+.+++.+..+
T Consensus 337 h~~~v~~v~~~~-~g~~l~s~s~D~~i~vwd~~~~~~~~~~ 376 (410)
T 1vyh_C 337 HDNWVRGVLFHS-GGKFILSCADDKTLRVWDYKNKRCMKTL 376 (410)
T ss_dssp CSSCEEEEEECS-SSSCEEEEETTTEEEEECCTTSCCCEEE
T ss_pred CCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCceEEEE
Confidence 6554 4566666 6999999999999999999988776543
No 3
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=5.3e-42 Score=290.55 Aligned_cols=245 Identities=18% Similarity=0.173 Sum_probs=202.1
Q ss_pred eecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEE----EeeCccCcEEEEEecCCCcEEEEeeCCCcEEEE
Q 024372 13 HGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIG----TFEGHKGAVWSCCLDANALFSASGSADFTAKLW 88 (268)
Q Consensus 13 ~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~----~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw 88 (268)
..|..+|.+++|+| ++ +|++|+.|++|+|||+.+++.+. .+.+|++.|.+++|+|++.+|++|+.|++|++|
T Consensus 79 ~~~~~~v~~~~~s~---d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iw 154 (344)
T 4gqb_B 79 VQTEAGVADLTWVG---ER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVW 154 (344)
T ss_dssp EEESSCEEEEEEET---TT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred eccCCCEEEEEEeC---CC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 46788999999996 64 68899999999999999987543 345899999999999999999999999999999
Q ss_pred eCCCCCeeeeec-cCCeEEEEEECCCC-CEEEEeeCCCeEEEEECCCCCCCCeEe-cCCcccEEEEEEeCCCCcEEEEee
Q 024372 89 DALTGDEKHSFE-HKHIVRACAFSEDT-HLLLTGGFEKILRIFDLNRPDAPPREV-GNSSGSIRTVAWLHSDQTILSSCT 165 (268)
Q Consensus 89 ~~~~~~~~~~~~-~~~~v~~v~~~~~~-~~l~s~~~d~~i~~~d~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~ 165 (268)
|+.+++++..+. |...|.+++|++++ .+|++|+.|+.|++||+++++...... ..+...+.+++|+|++..++++++
T Consensus 155 d~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~ 234 (344)
T 4gqb_B 155 DLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGD 234 (344)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEE
T ss_pred ECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEec
Confidence 999999888875 89999999999987 588999999999999998765332221 234557899999998888999999
Q ss_pred CCCeEEEEeCCCCceEEeecC-CCCEEEEEECCCC-cEEEE-eCCCeEEEEeCCCceeeeEEeCCCCceeeEEcCCCCCE
Q 024372 166 DSGGVRLWDARSGKIVQTLET-KSPVTSAEVSRDG-RYITT-ADGSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNI 242 (268)
Q Consensus 166 ~d~~i~iwd~~~~~~~~~~~~-~~~v~~~~~s~~g-~~l~~-~~~~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (268)
.|++|+|||+++++++.++.. ...|.+++|+|++ ++|++ +.|+.|++||++..++++...+...+.+++|+|....+
T Consensus 235 ~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~~~H~~~V~~v~~sp~~~~l 314 (344)
T 4gqb_B 235 ENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQAHRDFVRDATWSPLNHSL 314 (344)
T ss_dssp TTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEECCCSSCEEEEEECSSSTTE
T ss_pred cCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEEcCCCCCEEEEEEeCCCCeE
Confidence 999999999999999998875 4569999999998 56654 67899999999988776544444456778888865568
Q ss_pred EEeccCCCeEEEEECCCCc
Q 024372 243 FIAGGEDMWVHVFDFHTGE 261 (268)
Q Consensus 243 ~~~gs~d~~i~~wd~~~g~ 261 (268)
|++||.|+.|++|++.+..
T Consensus 315 las~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 315 LTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp EEEEETTSCEEEEECCC--
T ss_pred EEEEcCCCeEEEEECCCCC
Confidence 8899999999999997644
No 4
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.3e-41 Score=285.05 Aligned_cols=245 Identities=24% Similarity=0.312 Sum_probs=211.3
Q ss_pred EEeeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCCCcEEEEe
Q 024372 10 LVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWD 89 (268)
Q Consensus 10 ~~~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw~ 89 (268)
..+.+|..+|.+++|+| +|++|++|+.|++|++||+.+++.+.++.+|.+.|.+++|+|++.++++|+.|++|++||
T Consensus 59 ~~~~~h~~~v~~~~~s~---dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd 135 (319)
T 3frx_A 59 RSFKGHSHIVQDCTLTA---DGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWT 135 (319)
T ss_dssp EEEECCSSCEEEEEECT---TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred eEEeCCcccEEEEEECC---CCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence 45679999999999985 899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCeeeeeccCCeEEEEEECCC------CCEEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEE
Q 024372 90 ALTGDEKHSFEHKHIVRACAFSED------THLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSS 163 (268)
Q Consensus 90 ~~~~~~~~~~~~~~~v~~v~~~~~------~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 163 (268)
+..........|...|.++.|+|. +..+++++.|+.|++||++... ....+..|...+.+++|+|++. ++++
T Consensus 136 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~-~~~~~~~h~~~v~~~~~sp~g~-~l~s 213 (319)
T 3frx_A 136 IKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQ-IEADFIGHNSNINTLTASPDGT-LIAS 213 (319)
T ss_dssp TTSCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTE-EEEEECCCCSCEEEEEECTTSS-EEEE
T ss_pred CCCCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcch-hheeecCCCCcEEEEEEcCCCC-EEEE
Confidence 975544445568889999999985 4489999999999999997643 2344556888999999998765 5667
Q ss_pred eeCCCeEEEEeCCCCceEEeecCCCCEEEEEECCCCcEEEEeCCCeEEEEeCCCceeeeEEeCC---------CCceeeE
Q 024372 164 CTDSGGVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGYNMP---------CNTESAS 234 (268)
Q Consensus 164 ~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~v~~wd~~~~~~~~~~~~~---------~~~~~~~ 234 (268)
++.|++|+|||+++++++.++..+.++.+++|+|++.+++++.+..+++|++.....+..+... ....+++
T Consensus 214 ~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 293 (319)
T 3frx_A 214 AGKDGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLA 293 (319)
T ss_dssp EETTCEEEEEETTTTEEEEEEECCSCEEEEEECSSSSEEEEEETTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEE
T ss_pred EeCCCeEEEEECCCCcEEEEecCCCcEEEEEEcCCCCEEEEEcCCCcEEEEeCcCeeeeccCccccccccCcCcceeEEE
Confidence 7788999999999999999998888999999999999999888888999999887666555321 2244677
Q ss_pred EcCCCCCEEEeccCCCeEEEEECCCC
Q 024372 235 LEPKLGNIFIAGGEDMWVHVFDFHTG 260 (268)
Q Consensus 235 ~~~~~~~~~~~gs~d~~i~~wd~~~g 260 (268)
++| +|++|++|+.|+.|++||+.++
T Consensus 294 ~sp-dg~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 294 WSA-DGQTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp ECT-TSSEEEEEETTSCEEEEEEEEC
T ss_pred ECC-CCCEEEEeecCceEEEEEEeec
Confidence 777 7999999999999999999875
No 5
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.1e-41 Score=295.16 Aligned_cols=247 Identities=22% Similarity=0.350 Sum_probs=215.7
Q ss_pred eecEEeeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCCCcEE
Q 024372 7 AVPLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAK 86 (268)
Q Consensus 7 ~~~~~~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~ 86 (268)
.....+.+|.+.|.+++|+| +|++|++|+.|++|++||..+++++.++.+|...|.+++|+|++.++++|+.|++|+
T Consensus 141 ~~~~~l~~h~~~V~~v~~~~---~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~ 217 (410)
T 1vyh_C 141 DFERTLKGHTDSVQDISFDH---SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIK 217 (410)
T ss_dssp CCCEEECCCSSCEEEEEECT---TSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEE
T ss_pred cEEEEEeccCCcEEEEEEcC---CCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEE
Confidence 34556789999999999985 899999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCCeeeeec-cCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCC--------
Q 024372 87 LWDALTGDEKHSFE-HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSD-------- 157 (268)
Q Consensus 87 iw~~~~~~~~~~~~-~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~-------- 157 (268)
+||+.++.+...+. |...|.++.++|+++++++|+.|+.|++||+.++.. ...+..|...+.+++|+|+.
T Consensus 218 ~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~-~~~~~~h~~~v~~~~~~~~~~~~~~~~~ 296 (410)
T 1vyh_C 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKEC-KAELREHRHVVECISWAPESSYSSISEA 296 (410)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE-EEEECCCSSCEEEEEECCSCGGGGGGGC
T ss_pred EEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCce-eeEecCCCceEEEEEEcCcccccchhhh
Confidence 99999999887774 788999999999999999999999999999976543 34556788899999998863
Q ss_pred -----------CcEEEEeeCCCeEEEEeCCCCceEEeecC-CCCEEEEEECCCCcEEEE-eCCCeEEEEeCCCceeeeEE
Q 024372 158 -----------QTILSSCTDSGGVRLWDARSGKIVQTLET-KSPVTSAEVSRDGRYITT-ADGSSVKFWDANHFGLVKGY 224 (268)
Q Consensus 158 -----------~~~~~~~~~d~~i~iwd~~~~~~~~~~~~-~~~v~~~~~s~~g~~l~~-~~~~~v~~wd~~~~~~~~~~ 224 (268)
+.++++++.|+.|++||+++++++.++.. ...+.+++|+|+|++|++ +.|+.|++||+++.+++..+
T Consensus 297 ~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~ 376 (410)
T 1vyh_C 297 TGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL 376 (410)
T ss_dssp CSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEE
T ss_pred ccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEE
Confidence 34677888899999999999999988875 456999999999988765 57899999999998888888
Q ss_pred eCCCC-ceeeEEcCCCCCEEEeccCCCeEEEEECC
Q 024372 225 NMPCN-TESASLEPKLGNIFIAGGEDMWVHVFDFH 258 (268)
Q Consensus 225 ~~~~~-~~~~~~~~~~~~~~~~gs~d~~i~~wd~~ 258 (268)
..+.. +..+.+++ ++.+|++||.|+.|++|+.+
T Consensus 377 ~~h~~~v~~l~~~~-~~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 377 NAHEHFVTSLDFHK-TAPYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp ECCSSCEEEEEECS-SSSCEEEEETTSEEEEEC--
T ss_pred cCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEEeCC
Confidence 76654 45666666 68999999999999999863
No 6
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.5e-40 Score=277.07 Aligned_cols=252 Identities=25% Similarity=0.452 Sum_probs=217.8
Q ss_pred EEeeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCCCcEEEEe
Q 024372 10 LVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWD 89 (268)
Q Consensus 10 ~~~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw~ 89 (268)
..+.+|.++|++++|+| +|++|++|+.|+++++|+..+++....+.+|...|.+++|+|++.++++++.|+.|++||
T Consensus 17 ~~~~gh~~~v~~~~~s~---~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd 93 (312)
T 4ery_A 17 FTLAGHTKAVSSVKFSP---NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWD 93 (312)
T ss_dssp EEECCCSSCEEEEEECT---TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred EEEcccCCcEEEEEECC---CCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEE
Confidence 44579999999999985 899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCeeeeec-cCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEeeCCC
Q 024372 90 ALTGDEKHSFE-HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSG 168 (268)
Q Consensus 90 ~~~~~~~~~~~-~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~ 168 (268)
+.+++....+. |...|.++.|+|+++.+++|+.|+.|++||+++++ ....+..|..++.+++|+|++. ++++++.|+
T Consensus 94 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~-~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~ 171 (312)
T 4ery_A 94 VSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGK-CLKTLPAHSDPVSAVHFNRDGS-LIVSSSYDG 171 (312)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCC-EEEEECCCSSCEEEEEECTTSS-EEEEEETTS
T ss_pred CCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCE-EEEEecCCCCcEEEEEEcCCCC-EEEEEeCCC
Confidence 99998877775 78899999999999999999999999999997654 2345556788999999998765 566677889
Q ss_pred eEEEEeCCCCceEEeec--CCCCEEEEEECCCCcEEEE-eCCCeEEEEeCCCceeeeEEeCCCC---ceeeEEcCCCCCE
Q 024372 169 GVRLWDARSGKIVQTLE--TKSPVTSAEVSRDGRYITT-ADGSSVKFWDANHFGLVKGYNMPCN---TESASLEPKLGNI 242 (268)
Q Consensus 169 ~i~iwd~~~~~~~~~~~--~~~~v~~~~~s~~g~~l~~-~~~~~v~~wd~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 242 (268)
.|++||+++++++..+. ...++..++|+|+++++++ +.|+.|++||+++.+.+..+..+.. .....+.++++.+
T Consensus 172 ~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (312)
T 4ery_A 172 LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKW 251 (312)
T ss_dssp CEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCE
T ss_pred cEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcE
Confidence 99999999999887764 3456899999999998876 5689999999999988888865433 2233455557899
Q ss_pred EEeccCCCeEEEEECCCCcEEeec
Q 024372 243 FIAGGEDMWVHVFDFHTGEQIAIT 266 (268)
Q Consensus 243 ~~~gs~d~~i~~wd~~~g~~~~~~ 266 (268)
+++|+.|+.|++||+.+++.+..+
T Consensus 252 l~sg~~dg~i~vwd~~~~~~~~~~ 275 (312)
T 4ery_A 252 IVSGSEDNLVYIWNLQTKEIVQKL 275 (312)
T ss_dssp EEECCTTSCEEEEETTTCCEEEEE
T ss_pred EEEECCCCEEEEEECCCchhhhhh
Confidence 999999999999999999887654
No 7
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=2.8e-41 Score=289.57 Aligned_cols=252 Identities=22% Similarity=0.347 Sum_probs=202.6
Q ss_pred eeecEEeeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCCCcE
Q 024372 6 VAVPLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTA 85 (268)
Q Consensus 6 ~~~~~~~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v 85 (268)
......+.+|+++|++++|+| +|++|++|+.|++|++||..+++.+..+.+|...|.+++|+|++.++++|+.|+.+
T Consensus 56 ~~~~~~l~gH~~~V~~~~~sp---~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v 132 (380)
T 3iz6_a 56 LVCCRTLQGHSGKVYSLDWTP---EKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSAC 132 (380)
T ss_dssp CEEEEEECCCSSCEEEEEECT---TSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCC
T ss_pred eEEeecccccccEEEEEEEcC---CCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcE
Confidence 344456789999999999985 89999999999999999999999988898888888888888877766666666666
Q ss_pred EEEeC--------------------------------------------------CCCCeeeee------ccCCeEEEEE
Q 024372 86 KLWDA--------------------------------------------------LTGDEKHSF------EHKHIVRACA 109 (268)
Q Consensus 86 ~iw~~--------------------------------------------------~~~~~~~~~------~~~~~v~~v~ 109 (268)
++|++ .+++....+ .|...|.+++
T Consensus 133 ~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~ 212 (380)
T 3iz6_a 133 SIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLS 212 (380)
T ss_dssp EEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEE
T ss_pred EEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEE
Confidence 66654 333333332 2556788999
Q ss_pred ECC-CCCEEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEeeCCCeEEEEeCCCCceEEeecCC-
Q 024372 110 FSE-DTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLETK- 187 (268)
Q Consensus 110 ~~~-~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~- 187 (268)
|++ +++++++|+.|+.|++||++........+..|.+.|.+++|+|++. ++++++.|++|+|||+++++++..+..+
T Consensus 213 ~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~-~l~s~s~D~~i~lwd~~~~~~~~~~~~~~ 291 (380)
T 3iz6_a 213 INSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQ-RFGTGSDDGTCRLFDMRTGHQLQVYNREP 291 (380)
T ss_dssp ECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSS-EEEEECSSSCEEEEETTTTEEEEEECCCC
T ss_pred eecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCC-eEEEEcCCCeEEEEECCCCcEEEEecccc
Confidence 977 8899999999999999999755455667777889999999998765 5667788899999999999998877532
Q ss_pred -------CCEEEEEECCCCcEEEEe-CCCeEEEEeCCCceeeeEEe----CCC-CceeeEEcCCCCCEEEeccCCCeEEE
Q 024372 188 -------SPVTSAEVSRDGRYITTA-DGSSVKFWDANHFGLVKGYN----MPC-NTESASLEPKLGNIFIAGGEDMWVHV 254 (268)
Q Consensus 188 -------~~v~~~~~s~~g~~l~~~-~~~~v~~wd~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~gs~d~~i~~ 254 (268)
..+.+++|+|+|++++++ .|+.|++||+...+.+..+. .+. .+..+.++| +|.+|++||.|+.|++
T Consensus 292 ~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~-dg~~l~sgs~D~~i~i 370 (380)
T 3iz6_a 292 DRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSS-DGSALCTGSWDKNLKI 370 (380)
T ss_dssp SSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECS-SSSEEEEECTTSCEEE
T ss_pred cccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECC-CCCEEEEeeCCCCEEE
Confidence 237899999999998775 68999999998877766552 233 355677777 7999999999999999
Q ss_pred EECCCCcE
Q 024372 255 FDFHTGEQ 262 (268)
Q Consensus 255 wd~~~g~~ 262 (268)
|++..+++
T Consensus 371 W~~~~~~~ 378 (380)
T 3iz6_a 371 WAFSGHRK 378 (380)
T ss_dssp EECCSSSS
T ss_pred EecCCCcc
Confidence 99986654
No 8
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=9.8e-41 Score=280.12 Aligned_cols=251 Identities=22% Similarity=0.293 Sum_probs=212.2
Q ss_pred eecCCCeeeEEEecC-CCCCcEEEEEeCCCCeEEeeCCCCC--eEEEeeCccCcEEEEEecCCCcEEEEeeCCCcEEEEe
Q 024372 13 HGHSRPVVDLFYSPI-TPDGFFLVSASKDSSPMLRNGETGD--WIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWD 89 (268)
Q Consensus 13 ~~h~~~v~~~~f~~~-~~dg~~l~s~s~d~~i~iw~~~~~~--~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw~ 89 (268)
.+|.++|++++|+|. .+++.+|++|+.|++|++|+...++ +...+.+|...|.++++++++.++++++.|++|++||
T Consensus 29 ~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd 108 (321)
T 3ow8_A 29 QAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWD 108 (321)
T ss_dssp TSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEE
T ss_pred ccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEE
Confidence 589999999999874 2467899999999999999988775 3557899999999999999999999999999999999
Q ss_pred CCCCCeeeeec-cCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEeeCCC
Q 024372 90 ALTGDEKHSFE-HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSG 168 (268)
Q Consensus 90 ~~~~~~~~~~~-~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~ 168 (268)
+.+++....+. +...+.+++|+|+++.|++|+.|+.+++||++.+.. ......+...+.+++|+|++. ++++++.|+
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~-~~~~~~~~~~v~~~~~spdg~-~lasg~~dg 186 (321)
T 3ow8_A 109 LENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKK-EYSLDTRGKFILSIAYSPDGK-YLASGAIDG 186 (321)
T ss_dssp TTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSE-EEEEECSSSCEEEEEECTTSS-EEEEEETTS
T ss_pred CCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCce-eEEecCCCceEEEEEECCCCC-EEEEEcCCC
Confidence 99998877765 566788999999999999999999999999986543 334445677899999998775 566677889
Q ss_pred eEEEEeCCCCceEEeecC-CCCEEEEEECCCCcEEEEe-CCCeEEEEeCCCceeeeEEeCCCC-ceeeEEcCCCCCEEEe
Q 024372 169 GVRLWDARSGKIVQTLET-KSPVTSAEVSRDGRYITTA-DGSSVKFWDANHFGLVKGYNMPCN-TESASLEPKLGNIFIA 245 (268)
Q Consensus 169 ~i~iwd~~~~~~~~~~~~-~~~v~~~~~s~~g~~l~~~-~~~~v~~wd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 245 (268)
.|++||+++++.+.++.. ..++.+++|+|++++|+++ .|+.|++||++..+.+..+..+.. +..++++| ++.+|++
T Consensus 187 ~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp-~~~~l~s 265 (321)
T 3ow8_A 187 IINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCP-DDTHFVS 265 (321)
T ss_dssp CEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEEE
T ss_pred eEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECC-CCCEEEE
Confidence 999999999999998875 4579999999999988765 689999999999888887776554 45667777 6999999
Q ss_pred ccCCCeEEEEECCCCcEEeec
Q 024372 246 GGEDMWVHVFDFHTGEQIAIT 266 (268)
Q Consensus 246 gs~d~~i~~wd~~~g~~~~~~ 266 (268)
|+.|+.|++||+.+++.+..+
T Consensus 266 ~s~D~~v~iwd~~~~~~~~~~ 286 (321)
T 3ow8_A 266 SSSDKSVKVWDVGTRTCVHTF 286 (321)
T ss_dssp EETTSCEEEEETTTTEEEEEE
T ss_pred EeCCCcEEEEeCCCCEEEEEE
Confidence 999999999999999887764
No 9
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.1e-40 Score=279.79 Aligned_cols=243 Identities=20% Similarity=0.321 Sum_probs=213.3
Q ss_pred cEEeeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCCCcEEEE
Q 024372 9 PLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLW 88 (268)
Q Consensus 9 ~~~~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw 88 (268)
...+.+|...|.+++|+| ++.++++++.|++|++||..+++.+..+..|...+.+++|+|++.++++|+.|+.+++|
T Consensus 73 ~~~l~gh~~~v~~~~~~~---~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~ 149 (321)
T 3ow8_A 73 QWSLEGHQLGVVSVDISH---TLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIF 149 (321)
T ss_dssp EEEECCCSSCEEEEEECS---SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEE
T ss_pred eeeeccCCCCEEEEEECC---CCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEE
Confidence 345679999999999985 78899999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCeeeeec-cCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEeeCC
Q 024372 89 DALTGDEKHSFE-HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDS 167 (268)
Q Consensus 89 ~~~~~~~~~~~~-~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d 167 (268)
++.++.....+. +...+.+++|+|++++|++|+.|+.|++||+++++ ....+..|..+|.+++|+|++. ++++++.|
T Consensus 150 ~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~-~~~~~~~h~~~v~~l~~spd~~-~l~s~s~d 227 (321)
T 3ow8_A 150 GVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGK-LLHTLEGHAMPIRSLTFSPDSQ-LLVTASDD 227 (321)
T ss_dssp ETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE-EEEEECCCSSCCCEEEECTTSC-EEEEECTT
T ss_pred EcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCc-EEEEEcccCCceeEEEEcCCCC-EEEEEcCC
Confidence 999988877664 66789999999999999999999999999997654 3345567888999999998765 56677788
Q ss_pred CeEEEEeCCCCceEEeecCC-CCEEEEEECCCCcEEEE-eCCCeEEEEeCCCceeeeEEeCCC-CceeeEEcCCCCCEEE
Q 024372 168 GGVRLWDARSGKIVQTLETK-SPVTSAEVSRDGRYITT-ADGSSVKFWDANHFGLVKGYNMPC-NTESASLEPKLGNIFI 244 (268)
Q Consensus 168 ~~i~iwd~~~~~~~~~~~~~-~~v~~~~~s~~g~~l~~-~~~~~v~~wd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 244 (268)
++|+|||+++++.+.++..+ ..+.+++|+|++++|++ +.|+.|++||+++.+++..+..+. .+..+.+.+ ++++|+
T Consensus 228 g~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~-~g~~l~ 306 (321)
T 3ow8_A 228 GYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNG-NGSKIV 306 (321)
T ss_dssp SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT-TSSEEE
T ss_pred CeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECC-CCCEEE
Confidence 99999999999998888754 56999999999998775 578999999999999988886554 455677776 699999
Q ss_pred eccCCCeEEEEEC
Q 024372 245 AGGEDMWVHVFDF 257 (268)
Q Consensus 245 ~gs~d~~i~~wd~ 257 (268)
+++.|+.|++||.
T Consensus 307 s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 307 SVGDDQEIHIYDC 319 (321)
T ss_dssp EEETTCCEEEEEC
T ss_pred EEeCCCeEEEEeC
Confidence 9999999999996
No 10
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2.5e-40 Score=279.52 Aligned_cols=251 Identities=18% Similarity=0.323 Sum_probs=214.5
Q ss_pred cEEeeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCCCcEEEE
Q 024372 9 PLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLW 88 (268)
Q Consensus 9 ~~~~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw 88 (268)
...+.+|.++|.+++|+| ||++|++|+.|++|++||..+++.+..+..|...|.+++|+|++.++++|+.|+.+++|
T Consensus 48 ~~~l~gH~~~v~~~~~s~---d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw 124 (340)
T 1got_B 48 RRTLRGHLAKIYAMHWGT---DSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIY 124 (340)
T ss_dssp EEEECCCSSCEEEEEECT---TSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEE
T ss_pred heeecCCCCceEEEEECC---CCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 345679999999999985 89999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCe----eee-eccCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEE
Q 024372 89 DALTGDE----KHS-FEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSS 163 (268)
Q Consensus 89 ~~~~~~~----~~~-~~~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 163 (268)
++.+... ... ..|...|.++.|++++. +++++.|+.|++||++++. ....+..|.+.|.+++|+|++. ++++
T Consensus 125 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~-~~~~~~~h~~~v~~~~~~~~~~-~l~s 201 (340)
T 1got_B 125 NLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQ-QTTTFTGHTGDVMSLSLAPDTR-LFVS 201 (340)
T ss_dssp ETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTE-EEEEECCCSSCEEEEEECTTSS-EEEE
T ss_pred ECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCc-EEEEEcCCCCceEEEEECCCCC-EEEE
Confidence 9987542 222 34888999999998875 8899999999999997654 3345567888999999998765 6667
Q ss_pred eeCCCeEEEEeCCCCceEEeecC-CCCEEEEEECCCCcEEEE-eCCCeEEEEeCCCceeeeEEeCCC---CceeeEEcCC
Q 024372 164 CTDSGGVRLWDARSGKIVQTLET-KSPVTSAEVSRDGRYITT-ADGSSVKFWDANHFGLVKGYNMPC---NTESASLEPK 238 (268)
Q Consensus 164 ~~~d~~i~iwd~~~~~~~~~~~~-~~~v~~~~~s~~g~~l~~-~~~~~v~~wd~~~~~~~~~~~~~~---~~~~~~~~~~ 238 (268)
++.|+.|++||+++++++.++.. ...+.+++|+|+++++++ +.|+.|++||++....+..+..+. .+.++.++|
T Consensus 202 g~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~- 280 (340)
T 1got_B 202 GACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSK- 280 (340)
T ss_dssp EETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECT-
T ss_pred EeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECC-
Confidence 77889999999999999998875 456999999999998876 578999999999888777776433 355677777
Q ss_pred CCCEEEeccCCCeEEEEECCCCcEEeec
Q 024372 239 LGNIFIAGGEDMWVHVFDFHTGEQIAIT 266 (268)
Q Consensus 239 ~~~~~~~gs~d~~i~~wd~~~g~~~~~~ 266 (268)
++++|++|+.|+.|++||+.+++.+..+
T Consensus 281 ~g~~l~~g~~d~~i~vwd~~~~~~~~~~ 308 (340)
T 1got_B 281 SGRLLLAGYDDFNCNVWDALKADRAGVL 308 (340)
T ss_dssp TSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred CCCEEEEECCCCeEEEEEcccCcEeeEe
Confidence 6999999999999999999988877653
No 11
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=5.6e-40 Score=279.04 Aligned_cols=253 Identities=20% Similarity=0.270 Sum_probs=215.8
Q ss_pred cEEeeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCCCcEEEE
Q 024372 9 PLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLW 88 (268)
Q Consensus 9 ~~~~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw 88 (268)
...+.+|.++|++++|+| +|++|++|+.|++|++||..+++....+..|...|.+++|+|++.++++|+.|+.+++|
T Consensus 57 ~~~l~gH~~~V~~~~~s~---d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~ 133 (354)
T 2pbi_B 57 RRTLKGHGNKVLCMDWCK---DKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVY 133 (354)
T ss_dssp EEEEECCSSCEEEEEECT---TSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEE
T ss_pred EEEecCCCCeEEEEEECC---CCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEE
Confidence 456779999999999985 89999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCC-------eeeeeccCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCC-CCcE
Q 024372 89 DALTGD-------EKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHS-DQTI 160 (268)
Q Consensus 89 ~~~~~~-------~~~~~~~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~ 160 (268)
++.... ......|...|.+++|+|+++.|++++.|++|++||+++++. ...+..|...+.++++.|. ++.+
T Consensus 134 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~-~~~~~~h~~~v~~~~~~~~~~g~~ 212 (354)
T 2pbi_B 134 PLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQL-LQSFHGHGADVLCLDLAPSETGNT 212 (354)
T ss_dssp ECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCE-EEEEECCSSCEEEEEECCCSSCCE
T ss_pred EEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeE-EEEEcCCCCCeEEEEEEeCCCCCE
Confidence 986432 122234888999999999999999999999999999987643 4455677889999999875 3467
Q ss_pred EEEeeCCCeEEEEeCCCCceEEeecC-CCCEEEEEECCCCcEEEE-eCCCeEEEEeCCCceeeeEEeCCC---CceeeEE
Q 024372 161 LSSCTDSGGVRLWDARSGKIVQTLET-KSPVTSAEVSRDGRYITT-ADGSSVKFWDANHFGLVKGYNMPC---NTESASL 235 (268)
Q Consensus 161 ~~~~~~d~~i~iwd~~~~~~~~~~~~-~~~v~~~~~s~~g~~l~~-~~~~~v~~wd~~~~~~~~~~~~~~---~~~~~~~ 235 (268)
+++++.|++|++||+++++++..+.. ...+.+++|+|++.++++ +.|++|++||++..+.+..+.... ....+.+
T Consensus 213 l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~ 292 (354)
T 2pbi_B 213 FVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDF 292 (354)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEE
T ss_pred EEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEE
Confidence 78888899999999999999998875 457999999999988876 578999999999887776665432 3345666
Q ss_pred cCCCCCEEEeccCCCeEEEEECCCCcEEeec
Q 024372 236 EPKLGNIFIAGGEDMWVHVFDFHTGEQIAIT 266 (268)
Q Consensus 236 ~~~~~~~~~~gs~d~~i~~wd~~~g~~~~~~ 266 (268)
++ +++++++|+.|+.|++||+.+++.+..+
T Consensus 293 s~-~g~~l~~g~~d~~i~vwd~~~~~~~~~l 322 (354)
T 2pbi_B 293 SL-SGRLLFAGYNDYTINVWDVLKGSRVSIL 322 (354)
T ss_dssp CT-TSSEEEEEETTSCEEEEETTTCSEEEEE
T ss_pred eC-CCCEEEEEECCCcEEEEECCCCceEEEE
Confidence 66 6999999999999999999999877653
No 12
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=2.2e-40 Score=275.70 Aligned_cols=250 Identities=19% Similarity=0.306 Sum_probs=207.9
Q ss_pred eecEEeeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCCCcEE
Q 024372 7 AVPLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAK 86 (268)
Q Consensus 7 ~~~~~~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~ 86 (268)
.....+.+|..+|.+++|+| ++++|++|+.|++|++||..+++.+..+.+|.+.|.+++|+|++.++++|+.|++|+
T Consensus 46 ~~~~~~~~~~~~v~~~~~~~---~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~ 122 (304)
T 2ynn_A 46 VEVRSIQVTETPVRAGKFIA---RKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVK 122 (304)
T ss_dssp EEEEEEECCSSCEEEEEEEG---GGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEE
T ss_pred ceeEEeeccCCcEEEEEEeC---CCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEE
Confidence 34455678999999999996 899999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCCe-eeee-ccCCeEEEEEECC-CCCEEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCC-CCcEEE
Q 024372 87 LWDALTGDE-KHSF-EHKHIVRACAFSE-DTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHS-DQTILS 162 (268)
Q Consensus 87 iw~~~~~~~-~~~~-~~~~~v~~v~~~~-~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~ 162 (268)
+||+.++.. ...+ .|...|.+++|+| ++..|++|+.|+.|++||++...........+...+..+.+.+. ++.+++
T Consensus 123 lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~ 202 (304)
T 2ynn_A 123 LWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMI 202 (304)
T ss_dssp EEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEE
T ss_pred EEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEE
Confidence 999987744 3334 4888999999999 67899999999999999997665444445566678899998863 445777
Q ss_pred EeeCCCeEEEEeCCCCceEEeecCC-CCEEEEEECCCCcEEEE-eCCCeEEEEeCCCceeeeEEeCCCC-ceeeEEcCCC
Q 024372 163 SCTDSGGVRLWDARSGKIVQTLETK-SPVTSAEVSRDGRYITT-ADGSSVKFWDANHFGLVKGYNMPCN-TESASLEPKL 239 (268)
Q Consensus 163 ~~~~d~~i~iwd~~~~~~~~~~~~~-~~v~~~~~s~~g~~l~~-~~~~~v~~wd~~~~~~~~~~~~~~~-~~~~~~~~~~ 239 (268)
+++.|++|++||+++++++.++..+ ..+.+++|+|++.+|++ +.|+.|++||++++++++.+..+.. ...++++|+.
T Consensus 203 s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (304)
T 2ynn_A 203 TASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTG 282 (304)
T ss_dssp EEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTC
T ss_pred EEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCC
Confidence 8888999999999999999998754 56999999999988776 5789999999999999988876544 4566777754
Q ss_pred CC-EEEeccCCCeEEEEECCCC
Q 024372 240 GN-IFIAGGEDMWVHVFDFHTG 260 (268)
Q Consensus 240 ~~-~~~~gs~d~~i~~wd~~~g 260 (268)
+. ++++|+.|+ +.+|++.+.
T Consensus 283 ~~~~~asg~~~g-~~~~~~~~~ 303 (304)
T 2ynn_A 283 RKNYIASGFDNG-FTVLSLGND 303 (304)
T ss_dssp GGGCEEEEETTE-EEEEECC--
T ss_pred CceEEEEecCCc-eEEEEeccC
Confidence 44 466666555 778887653
No 13
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=3.2e-40 Score=276.65 Aligned_cols=251 Identities=20% Similarity=0.291 Sum_probs=212.9
Q ss_pred ecEEeeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCC-----CCeEEEeeCccCcEEEEEecCCCcEEEEeeCC
Q 024372 8 VPLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGET-----GDWIGTFEGHKGAVWSCCLDANALFSASGSAD 82 (268)
Q Consensus 8 ~~~~~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~-----~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D 82 (268)
....+.+|+++|++++|+| .++++|++|+.|++|++|+... +..+..+.+|...|.+++|+|++.++++|+.|
T Consensus 9 l~~~l~gH~~~V~~l~~~~--~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D 86 (319)
T 3frx_A 9 LRGTLEGHNGWVTSLATSA--GQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWD 86 (319)
T ss_dssp EEEEECCCSSCEEEEEECS--SCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEEEEccccceEEEEEccC--CCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCC
Confidence 3345679999999999986 2457999999999999998764 34577899999999999999999999999999
Q ss_pred CcEEEEeCCCCCeeeeec-cCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCC----
Q 024372 83 FTAKLWDALTGDEKHSFE-HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSD---- 157 (268)
Q Consensus 83 ~~v~iw~~~~~~~~~~~~-~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~---- 157 (268)
++|++||+.+++....+. |...|.+++|+|+++++++|+.|++|++||++.. .......|...+.++.+.|..
T Consensus 87 ~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~--~~~~~~~h~~~v~~~~~~~~~~~~~ 164 (319)
T 3frx_A 87 KTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQ--CLATLLGHNDWVSQVRVVPNEKADD 164 (319)
T ss_dssp SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSC--EEEEECCCSSCEEEEEECCC-----
T ss_pred CEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC--eEEEEeccCCcEEEEEEccCCCCCC
Confidence 999999999998877764 8899999999999999999999999999998632 334555778899999998753
Q ss_pred -CcEEEEeeCCCeEEEEeCCCCceEEeec-CCCCEEEEEECCCCcEEEE-eCCCeEEEEeCCCceeeeEEeCCCCceeeE
Q 024372 158 -QTILSSCTDSGGVRLWDARSGKIVQTLE-TKSPVTSAEVSRDGRYITT-ADGSSVKFWDANHFGLVKGYNMPCNTESAS 234 (268)
Q Consensus 158 -~~~~~~~~~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~~g~~l~~-~~~~~v~~wd~~~~~~~~~~~~~~~~~~~~ 234 (268)
..++++++.|+.|++||+++++....+. +..++.+++|+|+|++|++ +.|+.|++||++..+.+..+..+.....++
T Consensus 165 ~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~ 244 (319)
T 3frx_A 165 DSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEVFSLA 244 (319)
T ss_dssp -CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECCSCEEEEE
T ss_pred CccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCcEEEEE
Confidence 3467788889999999999999888776 4567999999999998876 578999999999999888888777777888
Q ss_pred EcCCCCCEEEeccCCCeEEEEECCCCcEEe
Q 024372 235 LEPKLGNIFIAGGEDMWVHVFDFHTGEQIA 264 (268)
Q Consensus 235 ~~~~~~~~~~~gs~d~~i~~wd~~~g~~~~ 264 (268)
++| ++.++++++.+ .+++|++..+..+.
T Consensus 245 ~sp-~~~~la~~~~~-~i~v~~~~~~~~~~ 272 (319)
T 3frx_A 245 FSP-NRYWLAAATAT-GIKVFSLDPQYLVD 272 (319)
T ss_dssp ECS-SSSEEEEEETT-EEEEEEETTEEEEE
T ss_pred EcC-CCCEEEEEcCC-CcEEEEeCcCeeee
Confidence 887 58888877655 49999987766544
No 14
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=4.4e-40 Score=278.29 Aligned_cols=245 Identities=18% Similarity=0.250 Sum_probs=202.2
Q ss_pred EEeeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCCCcEEEEe
Q 024372 10 LVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWD 89 (268)
Q Consensus 10 ~~~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw~ 89 (268)
..+.+|..+|.+++|+| ++.+|++|+.|++|++||+.+++.+.++.+|.+.|.+++|+|++.++++++.|++|++||
T Consensus 70 ~~l~~h~~~V~~~~~~~---~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd 146 (343)
T 2xzm_R 70 KALTGHNHFVSDLALSQ---ENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWN 146 (343)
T ss_dssp EEECCCSSCEEEEEECS---STTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEE
T ss_pred chhccCCCceEEEEECC---CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEe
Confidence 44679999999999985 889999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCeeeee---ccCCeEEEEEECCCC----------CEEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCC
Q 024372 90 ALTGDEKHSF---EHKHIVRACAFSEDT----------HLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHS 156 (268)
Q Consensus 90 ~~~~~~~~~~---~~~~~v~~v~~~~~~----------~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~ 156 (268)
+......... .|...|.+++|+|++ .++++++.|+.|++||... .....+..|.+.|.+++|+|+
T Consensus 147 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~--~~~~~~~~h~~~v~~~~~s~~ 224 (343)
T 2xzm_R 147 ILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNF--QIRYTFKAHESNVNHLSISPN 224 (343)
T ss_dssp SSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTT--EEEEEEECCSSCEEEEEECTT
T ss_pred ccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCC--ceeEEEcCccccceEEEECCC
Confidence 9743332222 477789999999986 7899999999999999532 223345567889999999987
Q ss_pred CCcEEEEeeCCCeEEEEeCC-CCceEEeecCCCCEEEEEECCCCcEEEEeCCCeEEEEeCCCceeee--EEe--------
Q 024372 157 DQTILSSCTDSGGVRLWDAR-SGKIVQTLETKSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVK--GYN-------- 225 (268)
Q Consensus 157 ~~~~~~~~~~d~~i~iwd~~-~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~v~~wd~~~~~~~~--~~~-------- 225 (268)
+. ++++++.|+.|+|||++ .......+.....+.+++|+|++.+++++.|+.|++||+.+..... .+.
T Consensus 225 g~-~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~v~~sp~~~~la~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~ 303 (343)
T 2xzm_R 225 GK-YIATGGKDKKLLIWDILNLTYPQREFDAGSTINQIAFNPKLQWVAVGTDQGVKIFNLMTQSKAPVCTIEAEPITKAE 303 (343)
T ss_dssp SS-EEEEEETTCEEEEEESSCCSSCSEEEECSSCEEEEEECSSSCEEEEEESSCEEEEESSSCCSCSEEECCCCSGGGBT
T ss_pred CC-EEEEEcCCCeEEEEECCCCcccceeecCCCcEEEEEECCCCCEEEEECCCCEEEEEeCCCCCCceEEeecCcchhhh
Confidence 75 56677788999999995 4455566656667999999999999998888999999997765443 222
Q ss_pred ----CCCCceeeEEcCCCCCEEEeccCCCeEEEEECCCCc
Q 024372 226 ----MPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGE 261 (268)
Q Consensus 226 ----~~~~~~~~~~~~~~~~~~~~gs~d~~i~~wd~~~g~ 261 (268)
......+++++| ++++|++|+.|+.|++|++.+|+
T Consensus 304 ~~~~~~~~v~~~~~sp-~g~~l~sg~~Dg~v~~w~~~~g~ 342 (343)
T 2xzm_R 304 GQKGKNPQCTSLAWNA-LGKKLFAGFTDGVIRTFSFETSA 342 (343)
T ss_dssp TBCCSCCCEEEEEECS-SSCCEEEEETTSEEEEEEEEEEE
T ss_pred hhcCCCCceEEEEECC-CCCeEEEecCCceEEEEEEEccC
Confidence 112245677777 69999999999999999998765
No 15
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=5.3e-40 Score=272.53 Aligned_cols=244 Identities=18% Similarity=0.261 Sum_probs=198.0
Q ss_pred EeeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCC--CCeEEEeeCccCcEEEEEecCC--CcEEEEeeCCCcEE
Q 024372 11 VCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGET--GDWIGTFEGHKGAVWSCCLDAN--ALFSASGSADFTAK 86 (268)
Q Consensus 11 ~~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~--~~~~~~~~~h~~~V~~~~~~~~--~~~l~s~s~D~~v~ 86 (268)
.+.+|.++|++++|+| +|++||+|+.|++|++|+... ++++.++.+|+++|.+++|+++ +.+|+||+.|++|+
T Consensus 4 ~~~~h~~~V~~~~~s~---~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~ 80 (297)
T 2pm7_B 4 IANAHNEMIHDAVMDY---YGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVM 80 (297)
T ss_dssp ECCSCSSCEEEEEECT---TSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEE
T ss_pred eccCCcCceEEEEECC---CCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEE
Confidence 4579999999999985 899999999999999999874 4678899999999999999863 78999999999999
Q ss_pred EEeCCCCC--eeeee-ccCCeEEEEEECCC--CCEEEEeeCCCeEEEEECCCCCC-CCeEecCCcccEEEEEEeCCC---
Q 024372 87 LWDALTGD--EKHSF-EHKHIVRACAFSED--THLLLTGGFEKILRIFDLNRPDA-PPREVGNSSGSIRTVAWLHSD--- 157 (268)
Q Consensus 87 iw~~~~~~--~~~~~-~~~~~v~~v~~~~~--~~~l~s~~~d~~i~~~d~~~~~~-~~~~~~~~~~~v~~~~~~~~~--- 157 (268)
+||+.++. ....+ .|...|.+++|+|+ +++|++++.|+.|++||++.... .......|...+.+++|+|..
T Consensus 81 iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~ 160 (297)
T 2pm7_B 81 IWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEE 160 (297)
T ss_dssp EEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC---
T ss_pred EEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccc
Confidence 99998764 33333 48889999999997 88999999999999999976532 234556788899999999863
Q ss_pred ---------CcEEEEeeCCCeEEEEeCCCCc----eEEeecC-CCCEEEEEECCCC---cEEEE-eCCCeEEEEeCCCce
Q 024372 158 ---------QTILSSCTDSGGVRLWDARSGK----IVQTLET-KSPVTSAEVSRDG---RYITT-ADGSSVKFWDANHFG 219 (268)
Q Consensus 158 ---------~~~~~~~~~d~~i~iwd~~~~~----~~~~~~~-~~~v~~~~~s~~g---~~l~~-~~~~~v~~wd~~~~~ 219 (268)
..++++++.|++|+|||+++++ ...++.. ...|.+++|+|++ .+|++ +.|++|++||++...
T Consensus 161 ~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~ 240 (297)
T 2pm7_B 161 DGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQ 240 (297)
T ss_dssp ---------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTT
T ss_pred cccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCC
Confidence 3578888889999999998876 4556664 4679999999985 66665 578999999987632
Q ss_pred ---eeeEE---eCCCCceeeEEcCCCCCEEEeccCCCeEEEEECC
Q 024372 220 ---LVKGY---NMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFH 258 (268)
Q Consensus 220 ---~~~~~---~~~~~~~~~~~~~~~~~~~~~gs~d~~i~~wd~~ 258 (268)
....+ .+......++++| ++++|++|+.|+.|++|+..
T Consensus 241 ~~~~~~~~~~~~~~~~v~~~~~s~-~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 241 GPWKKTLLKEEKFPDVLWRASWSL-SGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp SCCEEEESSSSCCSSCEEEEEECS-SSCCEEEEETTSCEEEEEEC
T ss_pred CccceeeeecccCCCcEEEEEECC-CCCEEEEEcCCCcEEEEEEC
Confidence 11122 1223455677777 69999999999999999976
No 16
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=3.6e-40 Score=280.57 Aligned_cols=244 Identities=17% Similarity=0.218 Sum_probs=201.3
Q ss_pred eeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEE----EeeCccCcEEEEEecCCCcEEEEeeCCCcEEE
Q 024372 12 CHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIG----TFEGHKGAVWSCCLDANALFSASGSADFTAKL 87 (268)
Q Consensus 12 ~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~----~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~i 87 (268)
..+|...|.+++|+| ++. +++++.|++|++||+.+++... ...+|.+.|.+++|+|++.+|++|+.|++|++
T Consensus 90 ~~~~~~~V~~~~~s~---d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~i 165 (357)
T 4g56_B 90 GVQTEAGVTDVAWVS---EKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKV 165 (357)
T ss_dssp EEECSSCEEEEEEET---TTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEE
T ss_pred cCCCCCCEEEEEEcC---CCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEE
Confidence 357999999999996 665 5578899999999999886442 34589999999999999999999999999999
Q ss_pred EeCCCCCeeeeec-cCCeEEEEEECCCCC-EEEEeeCCCeEEEEECCCCCCCCe-EecCCcccEEEEEEeCCCCcEEEEe
Q 024372 88 WDALTGDEKHSFE-HKHIVRACAFSEDTH-LLLTGGFEKILRIFDLNRPDAPPR-EVGNSSGSIRTVAWLHSDQTILSSC 164 (268)
Q Consensus 88 w~~~~~~~~~~~~-~~~~v~~v~~~~~~~-~l~s~~~d~~i~~~d~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~ 164 (268)
||+.+++....+. |...|.+++|++++. ++++++.|+.|++||+++++.... ....+...+.+++|+|+++.+++++
T Consensus 166 wd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g 245 (357)
T 4g56_B 166 WDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACG 245 (357)
T ss_dssp EETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEE
T ss_pred EECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEe
Confidence 9999998888775 788999999999874 789999999999999987654332 2334667899999999988889899
Q ss_pred eCCCeEEEEeCCCCceEEeecC-CCCEEEEEECCCC-cEEEE-eCCCeEEEEeCCCceeeeEEeCCCCceeeEEcCCCCC
Q 024372 165 TDSGGVRLWDARSGKIVQTLET-KSPVTSAEVSRDG-RYITT-ADGSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGN 241 (268)
Q Consensus 165 ~~d~~i~iwd~~~~~~~~~~~~-~~~v~~~~~s~~g-~~l~~-~~~~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (268)
+.|+.|++||++++++++++.. ...+.+++|+|++ ++|++ +.|+.|++||++..++++.+.+...+..++|+|.++.
T Consensus 246 ~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~~H~~~V~~vafsP~d~~ 325 (357)
T 4g56_B 246 DETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDLSHRDFVTGVAWSPLDHS 325 (357)
T ss_dssp ESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEECCCSSCEEEEEECSSSTT
T ss_pred ecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEECCCCCCEEEEEEeCCCCC
Confidence 9999999999999999988875 4579999999997 56654 5789999999999888877665556778888886799
Q ss_pred EEEeccCCCeEEEEECCC
Q 024372 242 IFIAGGEDMWVHVFDFHT 259 (268)
Q Consensus 242 ~~~~gs~d~~i~~wd~~~ 259 (268)
+|++||.|+.|++||+.+
T Consensus 326 ~l~s~s~Dg~v~iW~~~~ 343 (357)
T 4g56_B 326 KFTTVGWDHKVLHHHLPS 343 (357)
T ss_dssp EEEEEETTSCEEEEECC-
T ss_pred EEEEEcCCCeEEEEECCC
Confidence 999999999999999864
No 17
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=5.2e-39 Score=271.48 Aligned_cols=243 Identities=20% Similarity=0.308 Sum_probs=208.1
Q ss_pred eecEEeeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCC----CeEEEeeCccCcEEEEEecCCCcEEEEeeCC
Q 024372 7 AVPLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETG----DWIGTFEGHKGAVWSCCLDANALFSASGSAD 82 (268)
Q Consensus 7 ~~~~~~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~----~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D 82 (268)
.....+..|...|.+++|+| +|++|++|+.|+.+++|+..++ +....+.+|.+.|.++.|++++. +++++.|
T Consensus 88 ~~~~~~~~~~~~v~~~~~s~---~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d 163 (340)
T 1got_B 88 NKVHAIPLRSSWVMTCAYAP---SGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGD 163 (340)
T ss_dssp CEEEEEECSSSCEEEEEECT---TSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETT
T ss_pred CcceEeecCCccEEEEEECC---CCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECC
Confidence 34455678999999999985 8999999999999999999876 35677899999999999998876 7899999
Q ss_pred CcEEEEeCCCCCeeeeec-cCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEE
Q 024372 83 FTAKLWDALTGDEKHSFE-HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTIL 161 (268)
Q Consensus 83 ~~v~iw~~~~~~~~~~~~-~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 161 (268)
++|++||+.++.....+. |...|.+++|+|+++++++|+.|+.|++||++++. ....+..|...|.+++|+|++. ++
T Consensus 164 ~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~-~~~~~~~h~~~v~~v~~~p~~~-~l 241 (340)
T 1got_B 164 TTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGM-CRQTFTGHESDINAICFFPNGN-AF 241 (340)
T ss_dssp SCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCS-EEEEECCCSSCEEEEEECTTSS-EE
T ss_pred CcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCe-eEEEEcCCcCCEEEEEEcCCCC-EE
Confidence 999999999998887775 88899999999999999999999999999997654 3345567888999999998765 56
Q ss_pred EEeeCCCeEEEEeCCCCceEEeecCC---CCEEEEEECCCCcEEEEe-CCCeEEEEeCCCceeeeEEeCCCC-ceeeEEc
Q 024372 162 SSCTDSGGVRLWDARSGKIVQTLETK---SPVTSAEVSRDGRYITTA-DGSSVKFWDANHFGLVKGYNMPCN-TESASLE 236 (268)
Q Consensus 162 ~~~~~d~~i~iwd~~~~~~~~~~~~~---~~v~~~~~s~~g~~l~~~-~~~~v~~wd~~~~~~~~~~~~~~~-~~~~~~~ 236 (268)
++++.|++|++||+++++.+..+.+. ..+.+++|+|+|++++++ .|+.|++||+.....+..+..+.. +..+.++
T Consensus 242 ~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s 321 (340)
T 1got_B 242 ATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVT 321 (340)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEC
T ss_pred EEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEc
Confidence 67778899999999999888877643 369999999999998764 689999999998888888876554 4456666
Q ss_pred CCCCCEEEeccCCCeEEEEE
Q 024372 237 PKLGNIFIAGGEDMWVHVFD 256 (268)
Q Consensus 237 ~~~~~~~~~gs~d~~i~~wd 256 (268)
+ ++.+|++||.|+.|++||
T Consensus 322 ~-dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 322 D-DGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp T-TSSCEEEEETTSCEEEEC
T ss_pred C-CCCEEEEEcCCccEEecC
Confidence 6 699999999999999997
No 18
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.3e-39 Score=275.92 Aligned_cols=245 Identities=16% Similarity=0.174 Sum_probs=198.7
Q ss_pred ecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCC-----------CCeEEEeeCccCcEEEEEecCCCcEEEEeeCC
Q 024372 14 GHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGET-----------GDWIGTFEGHKGAVWSCCLDANALFSASGSAD 82 (268)
Q Consensus 14 ~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~-----------~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D 82 (268)
.|...|.+++|+| ||++|++++ |+++++||... .........|+..|.+++|+|++ .+++|+.|
T Consensus 28 ~~~~~v~~~~fs~---dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~d 102 (344)
T 4gqb_B 28 CMERQLEAARYRS---DGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASDS 102 (344)
T ss_dssp SCCSEEEEEEECT---TSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEETT
T ss_pred cccCCEEEEEECC---CCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEECC
Confidence 5778899999985 999999887 88999997321 11111223467889999999986 56799999
Q ss_pred CcEEEEeCCCCCeeeee-----ccCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCC
Q 024372 83 FTAKLWDALTGDEKHSF-----EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSD 157 (268)
Q Consensus 83 ~~v~iw~~~~~~~~~~~-----~~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~ 157 (268)
|+|+|||+.+++..... .|...|++++|+|++++|++|+.|++|++||+++++ ....+..|.+.|.+++|++++
T Consensus 103 g~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~-~~~~~~~h~~~V~~~~~~~~~ 181 (344)
T 4gqb_B 103 GAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQV-VLSSYRAHAAQVTCVAASPHK 181 (344)
T ss_dssp SEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE-EEEEECCCSSCEEEEEECSSC
T ss_pred CEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCc-EEEEEcCcCCceEEEEecCCC
Confidence 99999999988764433 488899999999999999999999999999998754 345566788999999999998
Q ss_pred CcEEEEeeCCCeEEEEeCCCCceEEeecC---CCCEEEEEECCC-CcEEEE-eCCCeEEEEeCCCceeeeEEeCCCC-ce
Q 024372 158 QTILSSCTDSGGVRLWDARSGKIVQTLET---KSPVTSAEVSRD-GRYITT-ADGSSVKFWDANHFGLVKGYNMPCN-TE 231 (268)
Q Consensus 158 ~~~~~~~~~d~~i~iwd~~~~~~~~~~~~---~~~v~~~~~s~~-g~~l~~-~~~~~v~~wd~~~~~~~~~~~~~~~-~~ 231 (268)
..++++++.|++|+|||++++++...+.. ...+.+++|+|+ ++++++ +.|+.|++||+++.+++..+..+.. +.
T Consensus 182 ~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~ 261 (344)
T 4gqb_B 182 DSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVT 261 (344)
T ss_dssp TTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEE
T ss_pred CCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEE
Confidence 88888999999999999999999887753 345899999996 466665 5789999999999998888887654 56
Q ss_pred eeEEcCCCCCEEEeccCCCeEEEEECCCCcEEe
Q 024372 232 SASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIA 264 (268)
Q Consensus 232 ~~~~~~~~~~~~~~gs~d~~i~~wd~~~g~~~~ 264 (268)
.++++|+..++|++||.|+.|++||+.+++.+.
T Consensus 262 ~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~ 294 (344)
T 4gqb_B 262 GLVFSPHSVPFLASLSEDCSLAVLDSSLSELFR 294 (344)
T ss_dssp EEEECSSSSCCEEEEETTSCEEEECTTCCEEEE
T ss_pred EEEEccCCCeEEEEEeCCCeEEEEECCCCcEEE
Confidence 677777544789999999999999999888654
No 19
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.3e-38 Score=269.22 Aligned_cols=253 Identities=23% Similarity=0.308 Sum_probs=202.1
Q ss_pred eecEEeeecCCCeeeEEEec--CC-CCCcEEEEEeCCCCeEEeeCCCC-------CeEEEeeCccCcEEEEEecCCCcEE
Q 024372 7 AVPLVCHGHSRPVVDLFYSP--IT-PDGFFLVSASKDSSPMLRNGETG-------DWIGTFEGHKGAVWSCCLDANALFS 76 (268)
Q Consensus 7 ~~~~~~~~h~~~v~~~~f~~--~~-~dg~~l~s~s~d~~i~iw~~~~~-------~~~~~~~~h~~~V~~~~~~~~~~~l 76 (268)
.....+.||+++|++++|.+ .+ ++|++|++|+.|++|++|+..++ .....+.+|...|.+++|+|++.++
T Consensus 12 ~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l 91 (343)
T 2xzm_R 12 VKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFA 91 (343)
T ss_dssp EEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEE
T ss_pred eeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEE
Confidence 34456789999999999921 11 48999999999999999998753 4567889999999999999999999
Q ss_pred EEeeCCCcEEEEeCCCCCeeeeec-cCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCe--EecCCcccEEEEEE
Q 024372 77 ASGSADFTAKLWDALTGDEKHSFE-HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPR--EVGNSSGSIRTVAW 153 (268)
Q Consensus 77 ~s~s~D~~v~iw~~~~~~~~~~~~-~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~--~~~~~~~~v~~~~~ 153 (268)
++|+.|++|++||+.++.....+. |...|.+++|+|+++.|++++.|+.|++||+... .... ....|...+.+++|
T Consensus 92 ~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~-~~~~~~~~~~~~~~v~~~~~ 170 (343)
T 2xzm_R 92 ISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGE-CKFSSAEKENHSDWVSCVRY 170 (343)
T ss_dssp EEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSC-EEEECCTTTSCSSCEEEEEE
T ss_pred EEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCC-ceeeeecccCCCceeeeeee
Confidence 999999999999999998877764 8899999999999999999999999999998632 1111 11256778999999
Q ss_pred eCCCC---------cEEEEeeCCCeEEEEeCCCCceEEeec-CCCCEEEEEECCCCcEEEE-eCCCeEEEEeCCC-ceee
Q 024372 154 LHSDQ---------TILSSCTDSGGVRLWDARSGKIVQTLE-TKSPVTSAEVSRDGRYITT-ADGSSVKFWDANH-FGLV 221 (268)
Q Consensus 154 ~~~~~---------~~~~~~~~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~~g~~l~~-~~~~~v~~wd~~~-~~~~ 221 (268)
+|.+. .++++++.|+.|++||. .++....+. +...+.+++|+|+|++|++ +.|+.|++||++. ....
T Consensus 171 ~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~ 249 (343)
T 2xzm_R 171 SPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQ 249 (343)
T ss_dssp CCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCS
T ss_pred ccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccc
Confidence 98762 46777888899999994 456666665 4567999999999998876 4689999999954 3444
Q ss_pred eEEeCCCCceeeEEcCCCCCEEEeccCCCeEEEEECCCCcEE
Q 024372 222 KGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQI 263 (268)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~gs~d~~i~~wd~~~g~~~ 263 (268)
..+.....+..++++| ++.+++ ++.|+.|++||+.+++.+
T Consensus 250 ~~~~~~~~v~~v~~sp-~~~~la-~~~d~~v~iw~~~~~~~~ 289 (343)
T 2xzm_R 250 REFDAGSTINQIAFNP-KLQWVA-VGTDQGVKIFNLMTQSKA 289 (343)
T ss_dssp EEEECSSCEEEEEECS-SSCEEE-EEESSCEEEEESSSCCSC
T ss_pred eeecCCCcEEEEEECC-CCCEEE-EECCCCEEEEEeCCCCCC
Confidence 5554555567778877 577665 556778999999877654
No 20
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=3e-38 Score=271.91 Aligned_cols=247 Identities=20% Similarity=0.354 Sum_probs=202.0
Q ss_pred eecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccC------------------cEEEEEecCCCc
Q 024372 13 HGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKG------------------AVWSCCLDANAL 74 (268)
Q Consensus 13 ~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~------------------~V~~~~~~~~~~ 74 (268)
.+|.+.|++++|+| ||++||+|+ |+++++|+..+++.+..+..|.. .|.+++|+|++.
T Consensus 61 ~~h~~~V~~v~fsp---dg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~ 136 (393)
T 1erj_A 61 LDHTSVVCCVKFSN---DGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGK 136 (393)
T ss_dssp EECSSCCCEEEECT---TSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSS
T ss_pred cCCCCEEEEEEECC---CCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCC
Confidence 37999999999985 999999976 78999999999999988876643 389999999999
Q ss_pred EEEEeeCCCcEEEEeCCCCCeeeeec-cCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEE
Q 024372 75 FSASGSADFTAKLWDALTGDEKHSFE-HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAW 153 (268)
Q Consensus 75 ~l~s~s~D~~v~iw~~~~~~~~~~~~-~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~ 153 (268)
++++|+.|++|++||+.+++....+. |...|.+++|+|+++.|++++.|++|++||+++++.. ... .+...+.++++
T Consensus 137 ~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~-~~~-~~~~~v~~~~~ 214 (393)
T 1erj_A 137 FLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCS-LTL-SIEDGVTTVAV 214 (393)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE-EEE-ECSSCEEEEEE
T ss_pred EEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeE-EEE-EcCCCcEEEEE
Confidence 99999999999999999988877764 8889999999999999999999999999999765432 222 34567899999
Q ss_pred eCCCCcEEEEeeCCCeEEEEeCCCCceEEeec--------CCCCEEEEEECCCCcEEEE-eCCCeEEEEeCCCce-----
Q 024372 154 LHSDQTILSSCTDSGGVRLWDARSGKIVQTLE--------TKSPVTSAEVSRDGRYITT-ADGSSVKFWDANHFG----- 219 (268)
Q Consensus 154 ~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~--------~~~~v~~~~~s~~g~~l~~-~~~~~v~~wd~~~~~----- 219 (268)
+|.++.++++++.|+.|++||+++++.+..+. +...+.+++|+|+|+++++ +.|+.|++||++...
T Consensus 215 ~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~ 294 (393)
T 1erj_A 215 SPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDS 294 (393)
T ss_dssp CSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------
T ss_pred ECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccc
Confidence 98667778888899999999999998887662 3457999999999998876 468999999997532
Q ss_pred -------eeeEEeCCCC-ceeeEEcCCCCCEEEeccCCCeEEEEECCCCcEEeec
Q 024372 220 -------LVKGYNMPCN-TESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIAIT 266 (268)
Q Consensus 220 -------~~~~~~~~~~-~~~~~~~~~~~~~~~~gs~d~~i~~wd~~~g~~~~~~ 266 (268)
+...+..+.. +..+++.+ ++.+|++|+.|+.|++||.++|+.+..+
T Consensus 295 ~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~sgs~D~~v~iwd~~~~~~~~~l 348 (393)
T 1erj_A 295 KTPNSGTCEVTYIGHKDFVLSVATTQ-NDEYILSGSKDRGVLFWDKKSGNPLLML 348 (393)
T ss_dssp ------CEEEEEECCSSCEEEEEECG-GGCEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred cCCCCCcceEEEecccCcEEEEEECC-CCCEEEEEeCCCeEEEEECCCCeEEEEE
Confidence 2334444433 44566666 6899999999999999999999887653
No 21
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.3e-39 Score=269.22 Aligned_cols=243 Identities=16% Similarity=0.243 Sum_probs=187.5
Q ss_pred ecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCC-------CCeEEEeeCccCcEEEEEecCCCcEEEEeeCCCcEE
Q 024372 14 GHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGET-------GDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAK 86 (268)
Q Consensus 14 ~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~-------~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~ 86 (268)
+|.++|.+++|+| +|++||+|+.|++|++|+... .+.+..+.+|++.|.+++|+|++.+|++|+.|++|+
T Consensus 56 ~h~~~v~~v~~sp---~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~ 132 (330)
T 2hes_X 56 AHKKAIRSVAWRP---HTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVW 132 (330)
T ss_dssp CCCSCEEEEEECT---TSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEE
T ss_pred CccCCEEEEEECC---CCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEE
Confidence 3999999999995 899999999999999999853 456788999999999999999999999999999999
Q ss_pred EEeCCCC----Ceeeee-ccCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCC-CCCeEecCCcccEEEEEEeCCC-Cc
Q 024372 87 LWDALTG----DEKHSF-EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPD-APPREVGNSSGSIRTVAWLHSD-QT 159 (268)
Q Consensus 87 iw~~~~~----~~~~~~-~~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~-~~~~~~~~~~~~v~~~~~~~~~-~~ 159 (268)
+||+... .+...+ .|...|.+++|+|++++|++|+.|++|++||...+. .....+..|.+.|.+++|+|++ ..
T Consensus 133 iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 212 (330)
T 2hes_X 133 IWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVF 212 (330)
T ss_dssp EEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSC
T ss_pred EEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCee
Confidence 9999432 233444 488899999999999999999999999999986432 1234556788999999999874 34
Q ss_pred EEEEeeCCCeEEEEeCCCC--------ceEEeec--CCCCEEEEEECCCCcEEEEeCCCeEEEEeCCCce--eeeEE-eC
Q 024372 160 ILSSCTDSGGVRLWDARSG--------KIVQTLE--TKSPVTSAEVSRDGRYITTADGSSVKFWDANHFG--LVKGY-NM 226 (268)
Q Consensus 160 ~~~~~~~d~~i~iwd~~~~--------~~~~~~~--~~~~v~~~~~s~~g~~l~~~~~~~v~~wd~~~~~--~~~~~-~~ 226 (268)
.+++++.|++|++||++++ .+...+. +...+.+++|++++.+++++.|+.|++||..... .+... ..
T Consensus 213 ~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~ 292 (330)
T 2hes_X 213 RLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYEEVDGEWKVFAKRALC 292 (330)
T ss_dssp EEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETTSCEEEEEEETTEEEEEEEESCT
T ss_pred EEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCCEEEEEeCCCEEEEEEcCCCceEEEeccccc
Confidence 6778888999999999764 3444554 4567999999998877777889999999987653 23222 22
Q ss_pred CC--CceeeEEcCC-CCCEEEeccCCCeEEEEECCC
Q 024372 227 PC--NTESASLEPK-LGNIFIAGGEDMWVHVFDFHT 259 (268)
Q Consensus 227 ~~--~~~~~~~~~~-~~~~~~~gs~d~~i~~wd~~~ 259 (268)
+. ....+.+.|. ++++|++||.|+.|++||+++
T Consensus 293 h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 293 HGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp TTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred cccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 22 3456667764 578999999999999999864
No 22
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=2.1e-39 Score=275.91 Aligned_cols=248 Identities=18% Similarity=0.213 Sum_probs=197.7
Q ss_pred eecCCCeeeEEEecCCCCCcEEEEEeC------CCCeEEeeCCCCCeE----EEeeCccCcEEEEEecCCCcEEEEeeCC
Q 024372 13 HGHSRPVVDLFYSPITPDGFFLVSASK------DSSPMLRNGETGDWI----GTFEGHKGAVWSCCLDANALFSASGSAD 82 (268)
Q Consensus 13 ~~h~~~v~~~~f~~~~~dg~~l~s~s~------d~~i~iw~~~~~~~~----~~~~~h~~~V~~~~~~~~~~~l~s~s~D 82 (268)
..|++.|++++|+| ||++||+|+. |+++++|+..+++.. ....+|.+.|.+++|+|++.+ ++++.|
T Consensus 39 ~~H~~~V~~v~fSp---DG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~-l~~s~d 114 (357)
T 4g56_B 39 ACMEVQIGAVRYRR---DGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGI-LVASDS 114 (357)
T ss_dssp -CCCSEEEEEEECS---SSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEE-EEEETT
T ss_pred ccccCCEEEEEECC---CCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCE-EEEECC
Confidence 36999999999985 9999999998 677889988777533 344578999999999999875 567889
Q ss_pred CcEEEEeCCCCCeee-----eeccCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCC
Q 024372 83 FTAKLWDALTGDEKH-----SFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSD 157 (268)
Q Consensus 83 ~~v~iw~~~~~~~~~-----~~~~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~ 157 (268)
++|+|||+.+++... ...|...|.+++|+|+++.|++|+.|+.|++||+++++ ....+..|.+.+.+++|++++
T Consensus 115 g~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~-~~~~~~~h~~~v~~v~~s~~~ 193 (357)
T 4g56_B 115 GAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKA-VLKSYNAHSSEVNCVAACPGK 193 (357)
T ss_dssp SCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTE-EEEEECCCSSCEEEEEECTTC
T ss_pred CEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCc-EEEEEcCCCCCEEEEEEccCC
Confidence 999999998876433 23578899999999999999999999999999998654 334556788899999999988
Q ss_pred CcEEEEeeCCCeEEEEeCCCCceEEeec---CCCCEEEEEECCCC-cEEEE-eCCCeEEEEeCCCceeeeEEeCCCC-ce
Q 024372 158 QTILSSCTDSGGVRLWDARSGKIVQTLE---TKSPVTSAEVSRDG-RYITT-ADGSSVKFWDANHFGLVKGYNMPCN-TE 231 (268)
Q Consensus 158 ~~~~~~~~~d~~i~iwd~~~~~~~~~~~---~~~~v~~~~~s~~g-~~l~~-~~~~~v~~wd~~~~~~~~~~~~~~~-~~ 231 (268)
..++++++.|++|++||+++++++..+. +...+.+++|+|++ .++++ +.|+.|++||+++.++++.+..+.. +.
T Consensus 194 ~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~ 273 (357)
T 4g56_B 194 DTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNIT 273 (357)
T ss_dssp SSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEE
T ss_pred CceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEE
Confidence 7778888888999999999998776553 34568999999985 56665 5789999999999988888876554 56
Q ss_pred eeEEcCCCCCEEEeccCCCeEEEEECCCCcEEee
Q 024372 232 SASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIAI 265 (268)
Q Consensus 232 ~~~~~~~~~~~~~~gs~d~~i~~wd~~~g~~~~~ 265 (268)
.++++|+.+++|++|+.|+.|++||+++++.+..
T Consensus 274 ~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~ 307 (357)
T 4g56_B 274 GLAYSYHSSPFLASISEDCTVAVLDADFSEVFRD 307 (357)
T ss_dssp EEEECSSSSCCEEEEETTSCEEEECTTSCEEEEE
T ss_pred EEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEE
Confidence 7778876557899999999999999999988764
No 23
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.8e-38 Score=267.56 Aligned_cols=206 Identities=22% Similarity=0.354 Sum_probs=170.6
Q ss_pred eeecEEeeecCC-CeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEE---EeeCccCcEEEEEecCCCcEEEEeeC
Q 024372 6 VAVPLVCHGHSR-PVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIG---TFEGHKGAVWSCCLDANALFSASGSA 81 (268)
Q Consensus 6 ~~~~~~~~~h~~-~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~---~~~~h~~~V~~~~~~~~~~~l~s~s~ 81 (268)
+.....+.+|.+ .|.+++|+| +|++||+|+.|++|++|+..+++... ...+|.+.|.+++|+|++.+|++|+.
T Consensus 5 ~~~~~~~~~h~~~~v~~l~~sp---~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~ 81 (345)
T 3fm0_A 5 LVLLGRVPAHPDSRCWFLAWNP---AGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASF 81 (345)
T ss_dssp EEEEEEECCSTTSCEEEEEECT---TSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEET
T ss_pred EEEeeeecCCCCCcEEEEEECC---CCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEEC
Confidence 344555678998 999999985 89999999999999999998886432 23689999999999999999999999
Q ss_pred CCcEEEEeCCCCC--eeeee-ccCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCC--CeEecCCcccEEEEEEeCC
Q 024372 82 DFTAKLWDALTGD--EKHSF-EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAP--PREVGNSSGSIRTVAWLHS 156 (268)
Q Consensus 82 D~~v~iw~~~~~~--~~~~~-~~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~--~~~~~~~~~~v~~~~~~~~ 156 (268)
|+++++|+...+. +...+ .|...|.+++|+|++++|++|+.|+.|++||++.+... ......|...+.+++|+|+
T Consensus 82 D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~ 161 (345)
T 3fm0_A 82 DATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPS 161 (345)
T ss_dssp TSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSS
T ss_pred CCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCC
Confidence 9999999987764 34444 48889999999999999999999999999999764321 2345567889999999998
Q ss_pred CCcEEEEeeCCCeEEEEeCCCCc--eEEeecC-CCCEEEEEECCCCcEEEE-eCCCeEEEEeC
Q 024372 157 DQTILSSCTDSGGVRLWDARSGK--IVQTLET-KSPVTSAEVSRDGRYITT-ADGSSVKFWDA 215 (268)
Q Consensus 157 ~~~~~~~~~~d~~i~iwd~~~~~--~~~~~~~-~~~v~~~~~s~~g~~l~~-~~~~~v~~wd~ 215 (268)
+.. +++++.|++|++||+++++ +..++.. ...|.+++|+|+|++|++ +.|++|++||.
T Consensus 162 ~~~-l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~ 223 (345)
T 3fm0_A 162 QEL-LASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQ 223 (345)
T ss_dssp SSC-EEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred CCE-EEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEecc
Confidence 764 5566788999999998875 3456654 467999999999998876 57899999985
No 24
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=2.9e-39 Score=270.46 Aligned_cols=244 Identities=19% Similarity=0.228 Sum_probs=191.1
Q ss_pred EeeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCC--eEEEeeCccCcEEEEEecC--CCcEEEEeeCCCcEE
Q 024372 11 VCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGD--WIGTFEGHKGAVWSCCLDA--NALFSASGSADFTAK 86 (268)
Q Consensus 11 ~~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~--~~~~~~~h~~~V~~~~~~~--~~~~l~s~s~D~~v~ 86 (268)
.+.+|+++|++++|+| +|++||+|+.|++|++||+.+++ ++.++.+|+++|.+++|++ ++.+|+||+.|++|+
T Consensus 8 ~~~~H~~~V~~v~~s~---~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~ 84 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDY---YGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVI 84 (316)
T ss_dssp ------CCEEEEEECG---GGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEE
T ss_pred ecccccCeEEEeeEcC---CCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEE
Confidence 3468999999999985 89999999999999999998874 5788999999999999976 478999999999999
Q ss_pred EEeCCCCC--eeeee-ccCCeEEEEEECCC--CCEEEEeeCCCeEEEEECCCCCCC--CeEecCCcccEEEEEEeCCC--
Q 024372 87 LWDALTGD--EKHSF-EHKHIVRACAFSED--THLLLTGGFEKILRIFDLNRPDAP--PREVGNSSGSIRTVAWLHSD-- 157 (268)
Q Consensus 87 iw~~~~~~--~~~~~-~~~~~v~~v~~~~~--~~~l~s~~~d~~i~~~d~~~~~~~--~~~~~~~~~~v~~~~~~~~~-- 157 (268)
+||+.++. ....+ .|...|.+++|+|+ +.+|++|+.|+.|++||++.+... ......|...+.+++|+|+.
T Consensus 85 iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 164 (316)
T 3bg1_A 85 IWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVP 164 (316)
T ss_dssp EECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC
T ss_pred EEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCC
Confidence 99998764 33344 48889999999997 789999999999999998754211 22334577788999998863
Q ss_pred --------------CcEEEEeeCCCeEEEEeCCCC---ceEEeecC-CCCEEEEEECCCC----cEEEE-eCCCeEEEEe
Q 024372 158 --------------QTILSSCTDSGGVRLWDARSG---KIVQTLET-KSPVTSAEVSRDG----RYITT-ADGSSVKFWD 214 (268)
Q Consensus 158 --------------~~~~~~~~~d~~i~iwd~~~~---~~~~~~~~-~~~v~~~~~s~~g----~~l~~-~~~~~v~~wd 214 (268)
..++++++.|++|+|||++.+ +++..+.. ...|.+++|+|++ .+|++ +.|++|++||
T Consensus 165 ~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~ 244 (316)
T 3bg1_A 165 GSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWT 244 (316)
T ss_dssp ------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEE
T ss_pred ccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEE
Confidence 246778888999999999865 35666664 4569999999986 56654 6799999999
Q ss_pred CCCce----eeeEE-eCCCCceeeEEcCCCCCEEEeccCCCeEEEEECC
Q 024372 215 ANHFG----LVKGY-NMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFH 258 (268)
Q Consensus 215 ~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~gs~d~~i~~wd~~ 258 (268)
++... ..+.+ .+...+..++++| ++++|++|+.|+.|++|+..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~v~~v~~sp-~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 245 CDDASSNTWSPKLLHKFNDVVWHVSWSI-TANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp CSSTTCCCCBCCEEEECSSCEEEEEECT-TTCCEEEEESSSCEEEEEEC
T ss_pred ccCccccchhhhhhhcCCCcEEEEEEcC-CCCEEEEEcCCCeEEEEEEC
Confidence 87521 11222 2234456777777 69999999999999999975
No 25
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.5e-37 Score=260.67 Aligned_cols=251 Identities=19% Similarity=0.277 Sum_probs=209.9
Q ss_pred EeeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCC-----eEEEeeCccCcEEEEEecCCCcEEEEeeCCCcE
Q 024372 11 VCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGD-----WIGTFEGHKGAVWSCCLDANALFSASGSADFTA 85 (268)
Q Consensus 11 ~~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~-----~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v 85 (268)
.|.||+++|++++|+| .++++||||+.|++|++||+.+++ ....+.+|.+.|.+++|+|++.++++++.|+.|
T Consensus 33 tL~GH~~~V~~v~~sp--~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i 110 (340)
T 4aow_A 33 TLKGHNGWVTQIATTP--QFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTL 110 (340)
T ss_dssp EECCCSSCEEEEEECT--TCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred EECCccCCEEEEEEeC--CCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccc
Confidence 4679999999999997 246899999999999999987654 567889999999999999999999999999999
Q ss_pred EEEeCCCCCeeeeec-cCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCC-cEEEE
Q 024372 86 KLWDALTGDEKHSFE-HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQ-TILSS 163 (268)
Q Consensus 86 ~iw~~~~~~~~~~~~-~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~ 163 (268)
++|+........... +...+..+.++++++.+++++.|+.+++||+............|...+..+++.+... .++++
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s 190 (340)
T 4aow_A 111 RLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVS 190 (340)
T ss_dssp EEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEE
T ss_pred eEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEE
Confidence 999998877666554 5567888899999999999999999999998654332233345678899999987654 46777
Q ss_pred eeCCCeEEEEeCCCCceEEeecC-CCCEEEEEECCCCcEEEE-eCCCeEEEEeCCCceeeeEEeCCCCceeeEEcCCCCC
Q 024372 164 CTDSGGVRLWDARSGKIVQTLET-KSPVTSAEVSRDGRYITT-ADGSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGN 241 (268)
Q Consensus 164 ~~~d~~i~iwd~~~~~~~~~~~~-~~~v~~~~~s~~g~~l~~-~~~~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (268)
++.|+.|++||+++++++..+.. ..+|.+++|+|++++|++ +.|+.|++||++..+.+..+..+.....+.+.+ +.
T Consensus 191 ~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~--~~ 268 (340)
T 4aow_A 191 CGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSP--NR 268 (340)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEECS--SS
T ss_pred EcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecCC--CC
Confidence 88889999999999999888864 567999999999998876 578999999999999998888777666777766 34
Q ss_pred EEEeccCCCeEEEEECCCCcEEee
Q 024372 242 IFIAGGEDMWVHVFDFHTGEQIAI 265 (268)
Q Consensus 242 ~~~~gs~d~~i~~wd~~~g~~~~~ 265 (268)
.+++++.|+.|++||+++++.+..
T Consensus 269 ~~~~~~~d~~i~iwd~~~~~~~~~ 292 (340)
T 4aow_A 269 YWLCAATGPSIKIWDLEGKIIVDE 292 (340)
T ss_dssp SEEEEEETTEEEEEETTTTEEEEE
T ss_pred ceeeccCCCEEEEEECCCCeEEEe
Confidence 567778899999999988776654
No 26
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.6e-38 Score=264.16 Aligned_cols=249 Identities=20% Similarity=0.241 Sum_probs=193.0
Q ss_pred eeeecEEeeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCC--CeEEEe-eC-ccCcEEEEEecCCCcEEEEee
Q 024372 5 KVAVPLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETG--DWIGTF-EG-HKGAVWSCCLDANALFSASGS 80 (268)
Q Consensus 5 ~~~~~~~~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~--~~~~~~-~~-h~~~V~~~~~~~~~~~l~s~s 80 (268)
.+.....+.+|.++|.+++|+| + +||+|+.|++|++|++..+ +.+..+ .+ |.+.|.+++|+|++.+|++|+
T Consensus 3 ~~~~~~~~~~h~~~v~~~~~s~---~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s 77 (330)
T 2hes_X 3 SINLIKSLKLYKEKIWSFDFSQ---G--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGS 77 (330)
T ss_dssp CCEEEEEEECCSSCEEEEEEET---T--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEE
T ss_pred ccccceeeccCCCceeeeccCC---C--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEe
Confidence 3445566789999999999985 4 9999999999999999875 456666 44 999999999999999999999
Q ss_pred CCCcEEEEeCCCC-------Ceeeee-ccCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCC---CeEecCCcccEE
Q 024372 81 ADFTAKLWDALTG-------DEKHSF-EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAP---PREVGNSSGSIR 149 (268)
Q Consensus 81 ~D~~v~iw~~~~~-------~~~~~~-~~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~---~~~~~~~~~~v~ 149 (268)
.|++|++|++... .....+ .|...|.+++|+|++++|++|+.|+.|++||++..... ...+..|...|.
T Consensus 78 ~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~ 157 (330)
T 2hes_X 78 FDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVK 157 (330)
T ss_dssp TTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEE
T ss_pred CCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceE
Confidence 9999999998532 233333 48889999999999999999999999999998533211 234557888999
Q ss_pred EEEEeCCCCcEEEEeeCCCeEEEEeCCCC--ceEEeecC-CCCEEEEEECCC--CcEEE-EeCCCeEEEEeCCCc-----
Q 024372 150 TVAWLHSDQTILSSCTDSGGVRLWDARSG--KIVQTLET-KSPVTSAEVSRD--GRYIT-TADGSSVKFWDANHF----- 218 (268)
Q Consensus 150 ~~~~~~~~~~~~~~~~~d~~i~iwd~~~~--~~~~~~~~-~~~v~~~~~s~~--g~~l~-~~~~~~v~~wd~~~~----- 218 (268)
+++|+|++. ++++++.|++|++||.+++ +++..+.. ...|.+++|+|+ +.+++ ++.|++|++||++..
T Consensus 158 ~v~~~p~~~-~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~ 236 (330)
T 2hes_X 158 HVIWHPSEA-LLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQ 236 (330)
T ss_dssp EEEECSSSS-EEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSC
T ss_pred EEEECCCCC-EEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCcccc
Confidence 999998765 6667788899999999876 57777764 467999999998 66665 467899999998643
Q ss_pred ---eeeeEEeC--CCCceeeEEcCCCCCEEEeccCCCeEEEEECCCCc
Q 024372 219 ---GLVKGYNM--PCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGE 261 (268)
Q Consensus 219 ---~~~~~~~~--~~~~~~~~~~~~~~~~~~~gs~d~~i~~wd~~~g~ 261 (268)
.+...+.. ...+..+++.+ +.+|++|+.|+.|++||..+++
T Consensus 237 ~~~~~~~~~~~~h~~~v~~v~~s~--~~~l~s~~~dg~v~iw~~~~~~ 282 (330)
T 2hes_X 237 QEWVCEAILPDVHKRQVYNVAWGF--NGLIASVGADGVLAVYEEVDGE 282 (330)
T ss_dssp EEEEEEEECCSCCSSCEEEEEECT--TSCEEEEETTSCEEEEEEETTE
T ss_pred ceeEEeeecccccccceEEEEEcC--CCEEEEEeCCCEEEEEEcCCCc
Confidence 23333332 22345666664 4589999999999999988774
No 27
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=6.5e-38 Score=269.83 Aligned_cols=240 Identities=21% Similarity=0.296 Sum_probs=201.0
Q ss_pred CCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCCCcEEEEeCCCCCee
Q 024372 17 RPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEK 96 (268)
Q Consensus 17 ~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~ 96 (268)
..|++++|+| +|++|++|+.|++|++||..+++.+..+.+|...|.+++|+|++.++++++.|++|++||+.++++.
T Consensus 124 ~~v~~v~~s~---dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~ 200 (393)
T 1erj_A 124 LYIRSVCFSP---DGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCS 200 (393)
T ss_dssp CBEEEEEECT---TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE
T ss_pred eeEEEEEECC---CCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeE
Confidence 3599999985 8999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred eeeccCCeEEEEEECC-CCCEEEEeeCCCeEEEEECCCCCCCCeE------ecCCcccEEEEEEeCCCCcEEEEeeCCCe
Q 024372 97 HSFEHKHIVRACAFSE-DTHLLLTGGFEKILRIFDLNRPDAPPRE------VGNSSGSIRTVAWLHSDQTILSSCTDSGG 169 (268)
Q Consensus 97 ~~~~~~~~v~~v~~~~-~~~~l~s~~~d~~i~~~d~~~~~~~~~~------~~~~~~~v~~~~~~~~~~~~~~~~~~d~~ 169 (268)
..+.+...+.+++|+| +++++++|+.|+.|++||++++...... ...|.+.|.+++|+|++. ++++++.|+.
T Consensus 201 ~~~~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~-~l~s~s~d~~ 279 (393)
T 1erj_A 201 LTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQ-SVVSGSLDRS 279 (393)
T ss_dssp EEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSS-EEEEEETTSE
T ss_pred EEEEcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCC-EEEEEeCCCE
Confidence 8888888999999999 8999999999999999998765422111 135778999999998775 4566778899
Q ss_pred EEEEeCCCC------------ceEEeec-CCCCEEEEEECCCCcEEEE-eCCCeEEEEeCCCceeeeEEeCCCC-ceeeE
Q 024372 170 VRLWDARSG------------KIVQTLE-TKSPVTSAEVSRDGRYITT-ADGSSVKFWDANHFGLVKGYNMPCN-TESAS 234 (268)
Q Consensus 170 i~iwd~~~~------------~~~~~~~-~~~~v~~~~~s~~g~~l~~-~~~~~v~~wd~~~~~~~~~~~~~~~-~~~~~ 234 (268)
|++||+++. .+...+. +...+.+++++|++.++++ +.|+.|++||+++.+++..+..+.. +..++
T Consensus 280 v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~ 359 (393)
T 1erj_A 280 VKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVA 359 (393)
T ss_dssp EEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEE
T ss_pred EEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEE
Confidence 999999764 3344444 4456999999999998876 5789999999999988888876554 45556
Q ss_pred EcC-----CCCCEEEeccCCCeEEEEECCCC
Q 024372 235 LEP-----KLGNIFIAGGEDMWVHVFDFHTG 260 (268)
Q Consensus 235 ~~~-----~~~~~~~~gs~d~~i~~wd~~~g 260 (268)
+.+ +++.+|++||.|+.|++|+++..
T Consensus 360 ~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 360 VANGSSLGPEYNVFATGSGDCKARIWKYKKI 390 (393)
T ss_dssp ECSSCTTCTTCEEEEEEETTSEEEEEEEEEC
T ss_pred ecCCcCcCCCCCEEEEECCCCcEEECccccc
Confidence 554 25789999999999999998654
No 28
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=6.3e-38 Score=284.43 Aligned_cols=250 Identities=15% Similarity=0.219 Sum_probs=204.5
Q ss_pred ecEEeeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCC--CeEEEeeCccCcEEEEEecCCCcEEEEeeCC---
Q 024372 8 VPLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETG--DWIGTFEGHKGAVWSCCLDANALFSASGSAD--- 82 (268)
Q Consensus 8 ~~~~~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~--~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D--- 82 (268)
....+.+|++.|++++|+| ||++||+|+.|++|+|||..++ .+..++.+|.++|.+++|+|+++++++++.+
T Consensus 51 ~~~~~~~h~~~v~~~~~sp---dg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~ 127 (611)
T 1nr0_A 51 DTEIYTEHSHQTTVAKTSP---SGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRER 127 (611)
T ss_dssp CCEEECCCSSCEEEEEECT---TSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSC
T ss_pred cCeEecCCCCceEEEEECC---CCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCc
Confidence 4455679999999999985 9999999999999999998754 3567889999999999999999999988865
Q ss_pred -CcEEEEeCCCCCeeeee-ccCCeEEEEEECCCCC-EEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCc
Q 024372 83 -FTAKLWDALTGDEKHSF-EHKHIVRACAFSEDTH-LLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQT 159 (268)
Q Consensus 83 -~~v~iw~~~~~~~~~~~-~~~~~v~~v~~~~~~~-~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 159 (268)
+.|++||. +.....+ .|...|.+++|+|++. .|++|+.|++|++||....+ ....+..|.+.|.+++|+|++.
T Consensus 128 ~~~v~~wd~--~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~-~~~~l~~H~~~V~~v~fspdg~- 203 (611)
T 1nr0_A 128 FGHVFLFDT--GTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFK-FKSTFGEHTKFVHSVRYNPDGS- 203 (611)
T ss_dssp SEEEEETTT--CCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBE-EEEEECCCSSCEEEEEECTTSS-
T ss_pred eeEEEEeeC--CCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCe-EeeeeccccCceEEEEECCCCC-
Confidence 47888884 3333333 4888999999999986 69999999999999976543 2345567889999999999765
Q ss_pred EEEEeeCCCeEEEEeCCCCceEEeec--------CCCCEEEEEECCCCcEEEE-eCCCeEEEEeCCCceeeeEEeC----
Q 024372 160 ILSSCTDSGGVRLWDARSGKIVQTLE--------TKSPVTSAEVSRDGRYITT-ADGSSVKFWDANHFGLVKGYNM---- 226 (268)
Q Consensus 160 ~~~~~~~d~~i~iwd~~~~~~~~~~~--------~~~~v~~~~~s~~g~~l~~-~~~~~v~~wd~~~~~~~~~~~~---- 226 (268)
++++++.|++|+|||+++++++..+. +...|.+++|+|+|++|++ +.|++|++||+++++++..+..
T Consensus 204 ~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~ 283 (611)
T 1nr0_A 204 LFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRI 283 (611)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSG
T ss_pred EEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCc
Confidence 56677788999999999999988873 4567999999999998875 5789999999988766554431
Q ss_pred ---------------------------------------C-CCceeeEEcCCCCCEEEeccCCCeEEEEECCCCcEEee
Q 024372 227 ---------------------------------------P-CNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIAI 265 (268)
Q Consensus 227 ---------------------------------------~-~~~~~~~~~~~~~~~~~~gs~d~~i~~wd~~~g~~~~~ 265 (268)
+ ..+..++++| ++++|++|+.|+.|++||+.+++....
T Consensus 284 ~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~sp-dg~~l~s~s~D~~v~~Wd~~~~~~~~~ 361 (611)
T 1nr0_A 284 EDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSA-DGKTLFSADAEGHINSWDISTGISNRV 361 (611)
T ss_dssp GGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEC
T ss_pred cceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeC-CCCEEEEEeCCCcEEEEECCCCceeee
Confidence 1 1234566666 799999999999999999998876543
No 29
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=6.3e-38 Score=288.18 Aligned_cols=243 Identities=25% Similarity=0.340 Sum_probs=208.1
Q ss_pred EEeeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCCCcEEEEe
Q 024372 10 LVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWD 89 (268)
Q Consensus 10 ~~~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw~ 89 (268)
..+.+|...|.+++|+| +|++|++|+.|++|++||+.+++.+..+.+|.+.|.+++|+|++.+++||+.|++|++||
T Consensus 424 ~~~~~h~~~v~~v~~s~---~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd 500 (694)
T 3dm0_A 424 RRLTGHSHFVEDVVLSS---DGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWN 500 (694)
T ss_dssp EEEECCSSCEEEEEECT---TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred ceecCCCCcEEEEEECC---CCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEE
Confidence 35679999999999985 899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCeeeee----ccCCeEEEEEECCCC--CEEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEE
Q 024372 90 ALTGDEKHSF----EHKHIVRACAFSEDT--HLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSS 163 (268)
Q Consensus 90 ~~~~~~~~~~----~~~~~v~~v~~~~~~--~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 163 (268)
.......... .|...|.+++|+|++ ..+++|+.|+.|++||++... ....+..|.+.|.+++|+|++. ++++
T Consensus 501 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~-~~~~~~~h~~~v~~v~~spdg~-~l~s 578 (694)
T 3dm0_A 501 TLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCK-LRSTLAGHTGYVSTVAVSPDGS-LCAS 578 (694)
T ss_dssp TTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCC-EEEEECCCSSCEEEEEECTTSS-EEEE
T ss_pred CCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCc-EEEEEcCCCCCEEEEEEeCCCC-EEEE
Confidence 8654333222 377789999999986 689999999999999997653 3345567889999999998765 5667
Q ss_pred eeCCCeEEEEeCCCCceEEeecCCCCEEEEEECCCCcEEEEeCCCeEEEEeCCCceeeeEEeCCC---------------
Q 024372 164 CTDSGGVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGYNMPC--------------- 228 (268)
Q Consensus 164 ~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~v~~wd~~~~~~~~~~~~~~--------------- 228 (268)
++.|+.|+|||+++++++..+..+..+.+++|+|++.+++++.++.|++||++....+..+....
T Consensus 579 g~~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 658 (694)
T 3dm0_A 579 GGKDGVVLLWDLAEGKKLYSLEANSVIHALCFSPNRYWLCAATEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAAT 658 (694)
T ss_dssp EETTSBCEEEETTTTEEEECCBCSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCCCC--------------
T ss_pred EeCCCeEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEEcCCCEEEEECCCCCChhhhccccccccccccccccccC
Confidence 77889999999999999998888888999999999999998888899999999988776664321
Q ss_pred -----CceeeEEcCCCCCEEEeccCCCeEEEEECC
Q 024372 229 -----NTESASLEPKLGNIFIAGGEDMWVHVFDFH 258 (268)
Q Consensus 229 -----~~~~~~~~~~~~~~~~~gs~d~~i~~wd~~ 258 (268)
...++.++| +|++|++|+.|+.|++||+.
T Consensus 659 ~~~~~~~~~l~~sp-dg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 659 KRKVIYCTSLNWSA-DGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp --CCCCEEEEEECT-TSSEEEEEETTSEEEEEEC-
T ss_pred CceeEEeeeEEEcC-CCCEEEEEcCCCeEEEEecc
Confidence 123456666 79999999999999999975
No 30
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=2.1e-37 Score=263.15 Aligned_cols=243 Identities=19% Similarity=0.261 Sum_probs=206.2
Q ss_pred ecEEeeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCC------CeEEEeeCccCcEEEEEecCCCcEEEEeeC
Q 024372 8 VPLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETG------DWIGTFEGHKGAVWSCCLDANALFSASGSA 81 (268)
Q Consensus 8 ~~~~~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~------~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~ 81 (268)
+...+..|...|.+++|+| +|.+|++|+.|+++++|+.... +....+.+|.+.|.+++|+|++..+++++.
T Consensus 98 ~~~~~~~~~~~v~~~~~sp---~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~ 174 (354)
T 2pbi_B 98 KEHAVTMPCTWVMACAYAP---SGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASG 174 (354)
T ss_dssp EEEEEECSSSCCCEEEECT---TSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEET
T ss_pred cceEEecCCCCEEEEEECC---CCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeC
Confidence 3445567899999999985 8999999999999999987643 345677889999999999999999999999
Q ss_pred CCcEEEEeCCCCCeeeeec-cCCeEEEEEECC--CCCEEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCC
Q 024372 82 DFTAKLWDALTGDEKHSFE-HKHIVRACAFSE--DTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQ 158 (268)
Q Consensus 82 D~~v~iw~~~~~~~~~~~~-~~~~v~~v~~~~--~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 158 (268)
|++|++||+.+++....+. |...|.+++|+| +++.|++|+.|+.|++||++++.. ...+..|...|.+++|+|++.
T Consensus 175 D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~-~~~~~~h~~~v~~v~~~p~~~ 253 (354)
T 2pbi_B 175 DGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQC-VQAFETHESDVNSVRYYPSGD 253 (354)
T ss_dssp TSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCE-EEEECCCSSCEEEEEECTTSS
T ss_pred CCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcE-EEEecCCCCCeEEEEEeCCCC
Confidence 9999999999999888775 888999999987 568999999999999999987543 345567888999999998765
Q ss_pred cEEEEeeCCCeEEEEeCCCCceEEeecCC---CCEEEEEECCCCcEEEEe-CCCeEEEEeCCCceeeeEEeCCCC-ceee
Q 024372 159 TILSSCTDSGGVRLWDARSGKIVQTLETK---SPVTSAEVSRDGRYITTA-DGSSVKFWDANHFGLVKGYNMPCN-TESA 233 (268)
Q Consensus 159 ~~~~~~~~d~~i~iwd~~~~~~~~~~~~~---~~v~~~~~s~~g~~l~~~-~~~~v~~wd~~~~~~~~~~~~~~~-~~~~ 233 (268)
++++++.|++|++||+++++.+..+..+ ..+.+++|+|+|++++++ .|+.|++||+.+...+..+..+.. +..+
T Consensus 254 -~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l 332 (354)
T 2pbi_B 254 -AFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTL 332 (354)
T ss_dssp -EEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEE
T ss_pred -EEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEE
Confidence 5667788899999999999887776543 368899999999998765 689999999998888877765554 4566
Q ss_pred EEcCCCCCEEEeccCCCeEEEEE
Q 024372 234 SLEPKLGNIFIAGGEDMWVHVFD 256 (268)
Q Consensus 234 ~~~~~~~~~~~~gs~d~~i~~wd 256 (268)
.++| ++++|++|+.|+.|++|+
T Consensus 333 ~~sp-dg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 333 RVSP-DGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EECT-TSSCEEEEETTSEEEEEC
T ss_pred EECC-CCCEEEEEcCCCCEEecC
Confidence 6776 799999999999999996
No 31
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=9.5e-39 Score=277.96 Aligned_cols=246 Identities=18% Similarity=0.279 Sum_probs=203.4
Q ss_pred ecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCC-----------eEEEeeCcc------------CcEEEEEec
Q 024372 14 GHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGD-----------WIGTFEGHK------------GAVWSCCLD 70 (268)
Q Consensus 14 ~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~-----------~~~~~~~h~------------~~V~~~~~~ 70 (268)
.|.+.|++++|+| +|++||+|+.|+.|++|+..+++ +...+.+|. +.|.+++|+
T Consensus 26 ~~~~~V~~v~~s~---~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~ 102 (447)
T 3dw8_B 26 AEADIISTVEFNH---SGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWL 102 (447)
T ss_dssp CGGGSEEEEEECS---SSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEEC
T ss_pred cccCcEEEEEECC---CCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEc
Confidence 4688999999995 89999999999999999998876 588899998 889999999
Q ss_pred CCC--cEEEEeeCCCcEEEEeCCCCCee---------------------------------------ee--eccCCeEEE
Q 024372 71 ANA--LFSASGSADFTAKLWDALTGDEK---------------------------------------HS--FEHKHIVRA 107 (268)
Q Consensus 71 ~~~--~~l~s~s~D~~v~iw~~~~~~~~---------------------------------------~~--~~~~~~v~~ 107 (268)
|++ .++++++.|++|++||+.++... .. ..|...|.+
T Consensus 103 ~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 182 (447)
T 3dw8_B 103 PQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINS 182 (447)
T ss_dssp CCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCE
T ss_pred CCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEE
Confidence 998 78999999999999998664331 11 247889999
Q ss_pred EEECCCCCEEEEeeCCCeEEEEECCCCCCCCe-------EecCCcccEEEEEEeCCCCcEEEEeeCCCeEEEEeCCCCce
Q 024372 108 CAFSEDTHLLLTGGFEKILRIFDLNRPDAPPR-------EVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKI 180 (268)
Q Consensus 108 v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~-------~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~ 180 (268)
++|+|++++|++| .|+.|++||++....... ....|...+.+++|+|++..++++++.|+.|++||+++++.
T Consensus 183 ~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~ 261 (447)
T 3dw8_B 183 ISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASAL 261 (447)
T ss_dssp EEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSS
T ss_pred EEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcc
Confidence 9999999999998 799999999873322222 23467789999999998867788888899999999999886
Q ss_pred ----EEeecCCC-------------CEEEEEECCCCcEEEEeCCCeEEEEeCCC-ceeeeEEeCCCCcee----------
Q 024372 181 ----VQTLETKS-------------PVTSAEVSRDGRYITTADGSSVKFWDANH-FGLVKGYNMPCNTES---------- 232 (268)
Q Consensus 181 ----~~~~~~~~-------------~v~~~~~s~~g~~l~~~~~~~v~~wd~~~-~~~~~~~~~~~~~~~---------- 232 (268)
+..+..+. .+.+++|+|+|++|++++++.|++||++. .+++..+..+.....
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 341 (447)
T 3dw8_B 262 CDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDYLSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDC 341 (447)
T ss_dssp SCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEESSEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSG
T ss_pred ccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeCCeEEEEeCCCCccccceeeccccccccccccccccc
Confidence 67776543 79999999999998876559999999987 777777776543222
Q ss_pred ------eEEcCCCCCEEEeccCCCeEEEEECCCCcEEe
Q 024372 233 ------ASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIA 264 (268)
Q Consensus 233 ------~~~~~~~~~~~~~gs~d~~i~~wd~~~g~~~~ 264 (268)
+++++ ++++|++|+.|+.|++||+.+++.+.
T Consensus 342 i~~~~~~~~s~-~~~~l~s~s~dg~v~iwd~~~~~~~~ 378 (447)
T 3dw8_B 342 IFDKFECCWNG-SDSVVMTGSYNNFFRMFDRNTKRDIT 378 (447)
T ss_dssp GGCCCCEEECT-TSSEEEEECSTTEEEEEETTTCCEEE
T ss_pred cccceEEEECC-CCCEEEEeccCCEEEEEEcCCCccee
Confidence 67777 69999999999999999999988764
No 32
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-36 Score=257.67 Aligned_cols=256 Identities=23% Similarity=0.431 Sum_probs=221.7
Q ss_pred eeecEEeeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCCCcE
Q 024372 6 VAVPLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTA 85 (268)
Q Consensus 6 ~~~~~~~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v 85 (268)
..+++.+.+|.++|++++|+| +|++|++|+.|+.|++||..+++.+..+.+|.+.|.+++|+|++.++++++.|+.|
T Consensus 22 ~~~~~~l~~h~~~v~~~~~s~---~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i 98 (369)
T 3zwl_B 22 HMKAIKLTGHERPLTQVKYNK---EGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSI 98 (369)
T ss_dssp SEEEEEEECCSSCEEEEEECT---TSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEE
T ss_pred ccccEEEEEeeceEEEEEEcC---CCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeE
Confidence 346677889999999999985 89999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCeeeeeccCCeEEEEEECCCCCEEEEeeCC-----CeEEEEECCCCCC----------CCeEecCCcc--cE
Q 024372 86 KLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFE-----KILRIFDLNRPDA----------PPREVGNSSG--SI 148 (268)
Q Consensus 86 ~iw~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~s~~~d-----~~i~~~d~~~~~~----------~~~~~~~~~~--~v 148 (268)
++||+.+++....+.+...+.+++|+|+++.+++++.+ +.|++||+..... .......+.+ .+
T Consensus 99 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (369)
T 3zwl_B 99 KLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAA 178 (369)
T ss_dssp EEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCE
T ss_pred EEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccce
Confidence 99999999999999999999999999999999999999 9999999875432 1222333444 89
Q ss_pred EEEEEeCCCCcEEEEeeCCCeEEEEeCCC-CceEEeec-CCCCEEEEEECCCCcEEEE-eCCCeEEEEeCCCceeeeEEe
Q 024372 149 RTVAWLHSDQTILSSCTDSGGVRLWDARS-GKIVQTLE-TKSPVTSAEVSRDGRYITT-ADGSSVKFWDANHFGLVKGYN 225 (268)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~d~~i~iwd~~~-~~~~~~~~-~~~~v~~~~~s~~g~~l~~-~~~~~v~~wd~~~~~~~~~~~ 225 (268)
.+++|+|++.. +++++.|+.|++||+++ ++.+..+. +...+.+++|+|+++++++ +.|+.|++||+++.+.+..+.
T Consensus 179 ~~~~~~~~~~~-l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 257 (369)
T 3zwl_B 179 TVAGWSTKGKY-IIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE 257 (369)
T ss_dssp EEEEECGGGCE-EEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred eEEEEcCCCCE-EEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec
Confidence 99999987664 55667789999999998 67777776 4567999999999998775 468999999999999888888
Q ss_pred CCCCceeeEEcCCCCCEEEeccCCC--------------eEEEEECCCCcEEeec
Q 024372 226 MPCNTESASLEPKLGNIFIAGGEDM--------------WVHVFDFHTGEQIAIT 266 (268)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~gs~d~--------------~i~~wd~~~g~~~~~~ 266 (268)
.......+.+.+ +++++++++.++ .+++||..+++++..+
T Consensus 258 ~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~ 311 (369)
T 3zwl_B 258 TDCPLNTAVITP-LKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRV 311 (369)
T ss_dssp CSSCEEEEEECS-SSSEEEEEECCC-------------CEEEEEETTTCCEEEEE
T ss_pred CCCCceeEEecC-CCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhhe
Confidence 776777778777 699999998887 8999999998887653
No 33
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=9.1e-38 Score=287.13 Aligned_cols=250 Identities=19% Similarity=0.243 Sum_probs=210.2
Q ss_pred EeeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCC-----CeEEEeeCccCcEEEEEecCCCcEEEEeeCCCcE
Q 024372 11 VCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETG-----DWIGTFEGHKGAVWSCCLDANALFSASGSADFTA 85 (268)
Q Consensus 11 ~~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~-----~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v 85 (268)
.+.+|++.|++++|+| .++++|++|+.|++|++|+..+. .....+.+|...|.+++|+|++.+++||+.|++|
T Consensus 377 ~l~~H~~~V~~v~~~~--~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v 454 (694)
T 3dm0_A 377 TMRAHTDMVTAIATPI--DNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGEL 454 (694)
T ss_dssp EEECCSSCEEEEECCT--TCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred hcccCCceeEEEEecC--CCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcE
Confidence 4679999999999986 35679999999999999998763 3567889999999999999999999999999999
Q ss_pred EEEeCCCCCeeeee-ccCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeE---ecCCcccEEEEEEeCCCC-cE
Q 024372 86 KLWDALTGDEKHSF-EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPRE---VGNSSGSIRTVAWLHSDQ-TI 160 (268)
Q Consensus 86 ~iw~~~~~~~~~~~-~~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~---~~~~~~~v~~~~~~~~~~-~~ 160 (268)
++||+.++.....+ .|...|.+++|+|+++.|++|+.|++|++||..... .... ...|...|.+++|+|++. .+
T Consensus 455 ~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 533 (694)
T 3dm0_A 455 RLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGEC-KYTISEGGEGHRDWVSCVRFSPNTLQPT 533 (694)
T ss_dssp EEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCE-EEEECSSTTSCSSCEEEEEECSCSSSCE
T ss_pred EEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCc-ceeeccCCCCCCCcEEEEEEeCCCCcce
Confidence 99999998887766 488999999999999999999999999999975321 1111 134677899999998763 46
Q ss_pred EEEeeCCCeEEEEeCCCCceEEeecC-CCCEEEEEECCCCcEEEE-eCCCeEEEEeCCCceeeeEEeCCCCceeeEEcCC
Q 024372 161 LSSCTDSGGVRLWDARSGKIVQTLET-KSPVTSAEVSRDGRYITT-ADGSSVKFWDANHFGLVKGYNMPCNTESASLEPK 238 (268)
Q Consensus 161 ~~~~~~d~~i~iwd~~~~~~~~~~~~-~~~v~~~~~s~~g~~l~~-~~~~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~ 238 (268)
+++++.|++|++||++++++..++.. ...+.+++|+|+++++++ +.|+.|++||+++.+.+..+..+.....++++|
T Consensus 534 l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp- 612 (694)
T 3dm0_A 534 IVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCFSP- 612 (694)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCSSCEEEEEECS-
T ss_pred EEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCCCcEEEEEEcC-
Confidence 77888889999999999999888874 467999999999998876 578999999999998887777666677778877
Q ss_pred CCCEEEeccCCCeEEEEECCCCcEEee
Q 024372 239 LGNIFIAGGEDMWVHVFDFHTGEQIAI 265 (268)
Q Consensus 239 ~~~~~~~gs~d~~i~~wd~~~g~~~~~ 265 (268)
++.++++++ |+.|++||+.+++.+..
T Consensus 613 ~~~~l~~~~-~~~i~iwd~~~~~~~~~ 638 (694)
T 3dm0_A 613 NRYWLCAAT-EHGIKIWDLESKSIVED 638 (694)
T ss_dssp SSSEEEEEE-TTEEEEEETTTTEEEEE
T ss_pred CCcEEEEEc-CCCEEEEECCCCCChhh
Confidence 577666654 56699999999887754
No 34
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=4.9e-37 Score=255.79 Aligned_cols=245 Identities=21% Similarity=0.388 Sum_probs=204.8
Q ss_pred cEEeeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCCCcEEEE
Q 024372 9 PLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLW 88 (268)
Q Consensus 9 ~~~~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw 88 (268)
...+.+|..+|.+++|+| +|++|++|+.|++|++||..+++.+..+.+|...|.+++|+|++.++++|+.|++|++|
T Consensus 58 ~~~~~~h~~~v~~~~~~~---~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iw 134 (312)
T 4ery_A 58 EKTISGHKLGISDVAWSS---DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 134 (312)
T ss_dssp EEEECCCSSCEEEEEECT---TSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEE
T ss_pred chhhccCCCceEEEEEcC---CCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEE
Confidence 345678999999999985 89999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCeeeeec-cCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEeeCC
Q 024372 89 DALTGDEKHSFE-HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDS 167 (268)
Q Consensus 89 ~~~~~~~~~~~~-~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d 167 (268)
|+.++.....+. |..+|.+++|+|+++.+++++.|+.|++||+++++........+...+..++|+|++.. +++++.|
T Consensus 135 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~d 213 (312)
T 4ery_A 135 DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKY-ILAATLD 213 (312)
T ss_dssp ETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSE-EEEEETT
T ss_pred ECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCE-EEEEcCC
Confidence 999988877765 77899999999999999999999999999998655433333456678899999987765 5556778
Q ss_pred CeEEEEeCCCCceEEeecCCC-C---EEEEEECCCCcEEEE-eCCCeEEEEeCCCceeeeEEeCCCC-ceeeEEcCCCCC
Q 024372 168 GGVRLWDARSGKIVQTLETKS-P---VTSAEVSRDGRYITT-ADGSSVKFWDANHFGLVKGYNMPCN-TESASLEPKLGN 241 (268)
Q Consensus 168 ~~i~iwd~~~~~~~~~~~~~~-~---v~~~~~s~~g~~l~~-~~~~~v~~wd~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 241 (268)
+.|++||+++++++..+..+. . +......+++.++++ +.|+.|++||++..+.++.+..+.. +..+.++| ++.
T Consensus 214 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p-~~~ 292 (312)
T 4ery_A 214 NTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHP-TEN 292 (312)
T ss_dssp TEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECS-SSS
T ss_pred CeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecC-cCC
Confidence 999999999999988886432 1 223334467777766 4689999999999988888876655 45566666 688
Q ss_pred EEEecc--CCCeEEEEECC
Q 024372 242 IFIAGG--EDMWVHVFDFH 258 (268)
Q Consensus 242 ~~~~gs--~d~~i~~wd~~ 258 (268)
++++++ .|+.|++|+..
T Consensus 293 ~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 293 IIASAALENDKTIKLWKSD 311 (312)
T ss_dssp EEEEEECTTTCCEEEEECC
T ss_pred ceEEEEccCCccEEEecCC
Confidence 999886 69999999863
No 35
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=9.5e-38 Score=283.25 Aligned_cols=245 Identities=13% Similarity=0.146 Sum_probs=207.1
Q ss_pred eecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCCCcEEEEeCCC
Q 024372 13 HGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALT 92 (268)
Q Consensus 13 ~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw~~~~ 92 (268)
..+.+.+.+++|+| ||++||+++ ++++++|+..+++....+.+|.+.|.+++|+|++.++|||+.|++|+|||+.+
T Consensus 15 ~~~~g~~~~~~~sp---dg~~l~~~~-~~~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~ 90 (611)
T 1nr0_A 15 RTARGTAVVLGNTP---AGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQ 90 (611)
T ss_dssp CCCTTCCCCCEECT---TSSEEEEEE-TTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSS
T ss_pred CcccCceeEEeeCC---CCCEEEeCC-CCEEEEecCCCcccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCC
Confidence 35778889999985 999999998 56999999999999999999999999999999999999999999999999975
Q ss_pred CCe--eeee-ccCCeEEEEEECCCCCEEEEeeCC----CeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEee
Q 024372 93 GDE--KHSF-EHKHIVRACAFSEDTHLLLTGGFE----KILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCT 165 (268)
Q Consensus 93 ~~~--~~~~-~~~~~v~~v~~~~~~~~l~s~~~d----~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 165 (268)
+.. ...+ .|...|.+++|+|+++.|++++.+ +.+++||... ....+..|.+.|.+++|+|+++..+++++
T Consensus 91 ~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~---~~~~l~gh~~~v~~v~f~p~~~~~l~s~s 167 (611)
T 1nr0_A 91 TTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGT---SNGNLTGQARAMNSVDFKPSRPFRIISGS 167 (611)
T ss_dssp TTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCC---BCBCCCCCSSCEEEEEECSSSSCEEEEEE
T ss_pred CcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCCC---CcceecCCCCCceEEEECCCCCeEEEEEe
Confidence 443 3333 478899999999999999998865 3788888532 23445578889999999998887788889
Q ss_pred CCCeEEEEeCCCCceEEeecCC-CCEEEEEECCCCcEEEE-eCCCeEEEEeCCCceeeeEEe--------CCCCceeeEE
Q 024372 166 DSGGVRLWDARSGKIVQTLETK-SPVTSAEVSRDGRYITT-ADGSSVKFWDANHFGLVKGYN--------MPCNTESASL 235 (268)
Q Consensus 166 ~d~~i~iwd~~~~~~~~~~~~~-~~v~~~~~s~~g~~l~~-~~~~~v~~wd~~~~~~~~~~~--------~~~~~~~~~~ 235 (268)
.|++|++||.++++++.++..| ..|.+++|+|+|+++++ +.|++|++||+++.+++..+. +...+..+.+
T Consensus 168 ~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~ 247 (611)
T 1nr0_A 168 DDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTW 247 (611)
T ss_dssp TTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEE
T ss_pred CCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEE
Confidence 9999999999999998888754 56999999999998875 578999999999888777663 2234556777
Q ss_pred cCCCCCEEEeccCCCeEEEEECCCCcEEee
Q 024372 236 EPKLGNIFIAGGEDMWVHVFDFHTGEQIAI 265 (268)
Q Consensus 236 ~~~~~~~~~~gs~d~~i~~wd~~~g~~~~~ 265 (268)
+| ++++|++|+.|+.|++||+.+++.+..
T Consensus 248 sp-dg~~l~s~s~D~~v~lWd~~~~~~~~~ 276 (611)
T 1nr0_A 248 SP-DGTKIASASADKTIKIWNVATLKVEKT 276 (611)
T ss_dssp CT-TSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred CC-CCCEEEEEeCCCeEEEEeCCCCceeee
Confidence 77 699999999999999999999887654
No 36
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=5.4e-37 Score=262.41 Aligned_cols=251 Identities=13% Similarity=0.129 Sum_probs=204.7
Q ss_pred ecEEeeecCCCeeeEEEecCCCCC-cEEEEEeCCCCeEEeeCCCCCeEEEee--CccCcEEEEEecC-CCcEEEEeeCCC
Q 024372 8 VPLVCHGHSRPVVDLFYSPITPDG-FFLVSASKDSSPMLRNGETGDWIGTFE--GHKGAVWSCCLDA-NALFSASGSADF 83 (268)
Q Consensus 8 ~~~~~~~h~~~v~~~~f~~~~~dg-~~l~s~s~d~~i~iw~~~~~~~~~~~~--~h~~~V~~~~~~~-~~~~l~s~s~D~ 83 (268)
....+.+|.+.|.+++|+| +| ++|++|+.|++|++||..+++....+. +|.+.|.+++|+| ++.++++++.|+
T Consensus 65 ~~~~~~~h~~~v~~~~~~~---~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~ 141 (383)
T 3ei3_B 65 LHRTASPFDRRVTSLEWHP---THPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRG 141 (383)
T ss_dssp EEEEECCCSSCEEEEEECS---SCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTT
T ss_pred eEEeccCCCCCEEEEEECC---CCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCC
Confidence 3445679999999999996 77 899999999999999999988777765 6999999999999 678999999999
Q ss_pred cEEEEeCCCCCeeeeec---cCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcE
Q 024372 84 TAKLWDALTGDEKHSFE---HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTI 160 (268)
Q Consensus 84 ~v~iw~~~~~~~~~~~~---~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 160 (268)
.|++||+.......... +...|.+++|+|+++.|++|+.|+.|++||++ + ........|.+.+.+++|+|++..+
T Consensus 142 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~-~~~~~~~~h~~~v~~~~~~~~~~~~ 219 (383)
T 3ei3_B 142 ATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD-G-HEIFKEKLHKAKVTHAEFNPRCDWL 219 (383)
T ss_dssp EEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-S-CEEEEEECSSSCEEEEEECSSCTTE
T ss_pred EEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-C-CEEEEeccCCCcEEEEEECCCCCCE
Confidence 99999998644333322 34679999999999999999999999999984 2 2345556788899999999988867
Q ss_pred EEEeeCCCeEEEEeCCC----CceEEeecCCCCEEEEEECC-CCcEEEE-eCCCeEEEEeCCCceeeeEEeCCC------
Q 024372 161 LSSCTDSGGVRLWDARS----GKIVQTLETKSPVTSAEVSR-DGRYITT-ADGSSVKFWDANHFGLVKGYNMPC------ 228 (268)
Q Consensus 161 ~~~~~~d~~i~iwd~~~----~~~~~~~~~~~~v~~~~~s~-~g~~l~~-~~~~~v~~wd~~~~~~~~~~~~~~------ 228 (268)
+++++.|+.|++||+++ ++++..+.+...+.+++|+| +++++++ +.|+.|++||+++.+.+..+..+.
T Consensus 220 l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 299 (383)
T 3ei3_B 220 MATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQH 299 (383)
T ss_dssp EEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTT
T ss_pred EEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcccccccccccccccc
Confidence 88888899999999998 67788887778899999999 9988875 568999999998876655554211
Q ss_pred -Cce-----------eeEEcCCCCCEEEeccCCCeEEEEECCCCcEEeec
Q 024372 229 -NTE-----------SASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIAIT 266 (268)
Q Consensus 229 -~~~-----------~~~~~~~~~~~~~~gs~d~~i~~wd~~~g~~~~~~ 266 (268)
... .+.+.+ ++++ +|+.|+.|++||+.+++.+..+
T Consensus 300 ~~~~~~~~~p~~~~~~~~~s~-dg~~--s~s~d~~i~iwd~~~~~~~~~l 346 (383)
T 3ei3_B 300 LTPIKATWHPMYDLIVAGRYP-DDQL--LLNDKRTIDIYDANSGGLVHQL 346 (383)
T ss_dssp SCCCCCEECSSSSEEEEECBC-CTTT--CTTCCCCEEEEETTTCCEEEEE
T ss_pred ccceEEeccCCCCceEEEecC-Cccc--ccCCCCeEEEEecCCCceeeee
Confidence 111 123333 4554 7889999999999999987764
No 37
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1.9e-36 Score=253.51 Aligned_cols=252 Identities=19% Similarity=0.220 Sum_probs=203.7
Q ss_pred EeeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCC----CeEEEeeCccCcEEEEEecC--CCcEEEEeeCCCc
Q 024372 11 VCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETG----DWIGTFEGHKGAVWSCCLDA--NALFSASGSADFT 84 (268)
Q Consensus 11 ~~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~----~~~~~~~~h~~~V~~~~~~~--~~~~l~s~s~D~~ 84 (268)
.+.+|.++|++++|+| +|++||+|+.|++|++|+..++ +.+..+.+|.+.|.+++|+| ++.++++++.|++
T Consensus 6 ~~~gH~~~v~~~~~~~---~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~ 82 (351)
T 3f3f_A 6 FDSGHDDLVHDVVYDF---YGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKT 82 (351)
T ss_dssp EECCCSSCEEEEEECS---SSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred cCcccccceeEEEEcC---CCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCe
Confidence 3569999999999985 8999999999999999999876 46788899999999999999 6899999999999
Q ss_pred EEEEeCCCCC---------eeeee-ccCCeEEEEEECCC--CCEEEEeeCCCeEEEEECCCCCCCCeEe-----------
Q 024372 85 AKLWDALTGD---------EKHSF-EHKHIVRACAFSED--THLLLTGGFEKILRIFDLNRPDAPPREV----------- 141 (268)
Q Consensus 85 v~iw~~~~~~---------~~~~~-~~~~~v~~v~~~~~--~~~l~s~~~d~~i~~~d~~~~~~~~~~~----------- 141 (268)
|++||+.++. ....+ .|...|.+++|+|+ ++.+++++.|+.|++||++.++......
T Consensus 83 v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 162 (351)
T 3f3f_A 83 VKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIP 162 (351)
T ss_dssp EEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCC
T ss_pred EEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccc
Confidence 9999998763 23333 47889999999999 9999999999999999997665332211
Q ss_pred -cCCcccEEEEEEeCC--CCcEEEEeeCCCeEEEEeCCCCce--EEeec-CCCCEEEEEECCCC----cEEEE-eCCCeE
Q 024372 142 -GNSSGSIRTVAWLHS--DQTILSSCTDSGGVRLWDARSGKI--VQTLE-TKSPVTSAEVSRDG----RYITT-ADGSSV 210 (268)
Q Consensus 142 -~~~~~~v~~~~~~~~--~~~~~~~~~~d~~i~iwd~~~~~~--~~~~~-~~~~v~~~~~s~~g----~~l~~-~~~~~v 210 (268)
..+...+.+++|+|. ++.++++++.++.+.+|+...++. +..+. +...+.+++|+|++ +++++ +.|+.|
T Consensus 163 ~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i 242 (351)
T 3f3f_A 163 PANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRI 242 (351)
T ss_dssp CSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCE
T ss_pred cCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeE
Confidence 145678899999986 345677777889998888887765 55555 45679999999998 66665 578999
Q ss_pred EEEeCCCc----------------------------------------------eeeeEEeCCC-CceeeEEcCCCCCEE
Q 024372 211 KFWDANHF----------------------------------------------GLVKGYNMPC-NTESASLEPKLGNIF 243 (268)
Q Consensus 211 ~~wd~~~~----------------------------------------------~~~~~~~~~~-~~~~~~~~~~~~~~~ 243 (268)
++||++.. ..+..+..+. .+..+.+++ ++++|
T Consensus 243 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l 321 (351)
T 3f3f_A 243 RIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNL-TGTIL 321 (351)
T ss_dssp EEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECS-SSCCE
T ss_pred EEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcC-CCCEE
Confidence 99998753 3444454443 355667776 68999
Q ss_pred EeccCCCeEEEEECCCCcEEeec
Q 024372 244 IAGGEDMWVHVFDFHTGEQIAIT 266 (268)
Q Consensus 244 ~~gs~d~~i~~wd~~~g~~~~~~ 266 (268)
++|+.|+.|++||+.+++++..+
T Consensus 322 ~s~~~dg~v~iw~~~~~~~~~~~ 344 (351)
T 3f3f_A 322 SSAGDDGKVRLWKATYSNEFKCM 344 (351)
T ss_dssp EEEETTSCEEEEEECTTSCEEEE
T ss_pred EEecCCCcEEEEecCcCcchhhe
Confidence 99999999999999988766553
No 38
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=5.8e-37 Score=262.78 Aligned_cols=256 Identities=16% Similarity=0.146 Sum_probs=213.8
Q ss_pred cceeeecEEeeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCC------eEEEeeCccCcEEEEEecCC----
Q 024372 3 KRKVAVPLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGD------WIGTFEGHKGAVWSCCLDAN---- 72 (268)
Q Consensus 3 ~~~~~~~~~~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~------~~~~~~~h~~~V~~~~~~~~---- 72 (268)
+..+.....+.+|.++|++++|+| .+|++|+.|++|++|+..+++ .+..+.+|...|.+++|+|+
T Consensus 3 ~~~~~~~~~~~~h~~~i~~~~~~~-----~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 77 (397)
T 1sq9_A 3 KVFIATANAGKAHDADIFSVSACN-----SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERD 77 (397)
T ss_dssp CEEEEEEEESSCSSSCEEEEEECS-----SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETT
T ss_pred hhhhhhhhhhhhhhcCeEEEEecC-----CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccC
Confidence 334445556679999999999985 599999999999999999988 78899999999999999999
Q ss_pred C---cEEEEeeCCCcEEEEeCCCCCe-----eeeec-c-----CCeEEEEEEC----CCCCE-EEEeeCCCeEEEEECCC
Q 024372 73 A---LFSASGSADFTAKLWDALTGDE-----KHSFE-H-----KHIVRACAFS----EDTHL-LLTGGFEKILRIFDLNR 133 (268)
Q Consensus 73 ~---~~l~s~s~D~~v~iw~~~~~~~-----~~~~~-~-----~~~v~~v~~~----~~~~~-l~s~~~d~~i~~~d~~~ 133 (268)
+ .++++++.|+.|++|++.++.. ...+. | ...|.+++|+ |+++. |++++.|+.|++||++.
T Consensus 78 g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 157 (397)
T 1sq9_A 78 AFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHP 157 (397)
T ss_dssp TEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEES
T ss_pred CccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCc
Confidence 9 9999999999999999988775 55553 5 4889999999 99999 99999999999999976
Q ss_pred ------CCCCC----eEe-------cCCcccEEEEEEeCCCCcEEEEeeCCCeEEEEeCCCCceEEeecC-------CCC
Q 024372 134 ------PDAPP----REV-------GNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLET-------KSP 189 (268)
Q Consensus 134 ------~~~~~----~~~-------~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~-------~~~ 189 (268)
..... ..+ ..|...+.+++|+|++ ++++++.|+.|++||+++++.+..+.. ...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~ 235 (397)
T 1sq9_A 158 FADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNS 235 (397)
T ss_dssp SSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCC
T ss_pred cccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCc
Confidence 44332 033 3467789999999977 677778889999999999999988876 677
Q ss_pred EEEEEECCCCcEEEEe-CC---CeEEEEeCCCceeeeEEeC-------------C-CCceeeEEcCCCCCEEEeccCCCe
Q 024372 190 VTSAEVSRDGRYITTA-DG---SSVKFWDANHFGLVKGYNM-------------P-CNTESASLEPKLGNIFIAGGEDMW 251 (268)
Q Consensus 190 v~~~~~s~~g~~l~~~-~~---~~v~~wd~~~~~~~~~~~~-------------~-~~~~~~~~~~~~~~~~~~gs~d~~ 251 (268)
+.+++|+|++++++++ .+ +.|++||+++.+.+..+.. + ..+..+.+.+ ++++|++|+.|+.
T Consensus 236 i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~ 314 (397)
T 1sq9_A 236 IRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFND-SGETLCSAGWDGK 314 (397)
T ss_dssp EEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECS-SSSEEEEEETTSE
T ss_pred cceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECC-CCCEEEEEeCCCe
Confidence 9999999999988765 56 8999999999888887765 3 3455677776 6999999999999
Q ss_pred EEEEECCCCcEEeec
Q 024372 252 VHVFDFHTGEQIAIT 266 (268)
Q Consensus 252 i~~wd~~~g~~~~~~ 266 (268)
|++||+.+++.+..+
T Consensus 315 i~iwd~~~~~~~~~~ 329 (397)
T 1sq9_A 315 LRFWDVKTKERITTL 329 (397)
T ss_dssp EEEEETTTTEEEEEE
T ss_pred EEEEEcCCCceeEEE
Confidence 999999999887764
No 39
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.2e-37 Score=260.74 Aligned_cols=248 Identities=18% Similarity=0.258 Sum_probs=202.5
Q ss_pred EEeeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCC--CCCeEEEeeCccCcEEEEEecCC--CcEEEEeeCCCcE
Q 024372 10 LVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGE--TGDWIGTFEGHKGAVWSCCLDAN--ALFSASGSADFTA 85 (268)
Q Consensus 10 ~~~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~--~~~~~~~~~~h~~~V~~~~~~~~--~~~l~s~s~D~~v 85 (268)
..+.+|.++|++++|+| +|++||+|+.|++|++|+.. +++.+..+.+|.+.|.+++|+++ +.++++++.|+.|
T Consensus 5 ~~~~~h~~~v~~~~~s~---~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v 81 (379)
T 3jrp_A 5 VIANAHNELIHDAVLDY---YGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKV 81 (379)
T ss_dssp CCEEECCCCEEEEEECS---SSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCE
T ss_pred EEecCCcccEEEEEEcC---CCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEE
Confidence 45679999999999985 89999999999999999988 56778899999999999999977 8999999999999
Q ss_pred EEEeCCCCC--eeeee-ccCCeEEEEEECCC--CCEEEEeeCCCeEEEEECCCCCCCC-eEecCCcccEEEEEEeCC---
Q 024372 86 KLWDALTGD--EKHSF-EHKHIVRACAFSED--THLLLTGGFEKILRIFDLNRPDAPP-REVGNSSGSIRTVAWLHS--- 156 (268)
Q Consensus 86 ~iw~~~~~~--~~~~~-~~~~~v~~v~~~~~--~~~l~s~~~d~~i~~~d~~~~~~~~-~~~~~~~~~v~~~~~~~~--- 156 (268)
++||+.++. ....+ .|...|.+++|+|+ ++.+++++.|+.|++||++...... .....|...+.+++|+|.
T Consensus 82 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 161 (379)
T 3jrp_A 82 LIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIE 161 (379)
T ss_dssp EEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC--
T ss_pred EEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCcccc
Confidence 999998886 44444 47889999999999 9999999999999999998654332 344567889999999985
Q ss_pred ---------CCcEEEEeeCCCeEEEEeCCCCc----eEEeec-CCCCEEEEEECCC---CcEEEE-eCCCeEEEEeCCCc
Q 024372 157 ---------DQTILSSCTDSGGVRLWDARSGK----IVQTLE-TKSPVTSAEVSRD---GRYITT-ADGSSVKFWDANHF 218 (268)
Q Consensus 157 ---------~~~~~~~~~~d~~i~iwd~~~~~----~~~~~~-~~~~v~~~~~s~~---g~~l~~-~~~~~v~~wd~~~~ 218 (268)
++.++++++.|+.|++||+++++ .+..+. +...+.+++|+|+ ++++++ +.|+.|++||++..
T Consensus 162 ~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~ 241 (379)
T 3jrp_A 162 EDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNE 241 (379)
T ss_dssp --------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred ccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCC
Confidence 45567777888999999998765 334454 4567999999999 888765 56899999999875
Q ss_pred ee---eeEEe---CCCCceeeEEcCCCCCEEEeccCCCeEEEEECCCCc
Q 024372 219 GL---VKGYN---MPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGE 261 (268)
Q Consensus 219 ~~---~~~~~---~~~~~~~~~~~~~~~~~~~~gs~d~~i~~wd~~~g~ 261 (268)
.. ...+. .......+.+++ ++++|++++.|+.|++||+.++.
T Consensus 242 ~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~~~~dg~i~iw~~~~~~ 289 (379)
T 3jrp_A 242 QGPWKKTLLKEEKFPDVLWRASWSL-SGNVLALSGGDNKVTLWKENLEG 289 (379)
T ss_dssp TSCCEEEESSSSCCSSCEEEEEECS-SSCCEEEEESSSSEEEEEEEETT
T ss_pred CccceeeeeccccCCCcEEEEEEcC-CCCEEEEecCCCcEEEEeCCCCC
Confidence 31 12221 233455677777 69999999999999999987544
No 40
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.3e-36 Score=259.62 Aligned_cols=245 Identities=22% Similarity=0.303 Sum_probs=206.4
Q ss_pred ecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCCCcEEEEeCCC-
Q 024372 14 GHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALT- 92 (268)
Q Consensus 14 ~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw~~~~- 92 (268)
.|...|.+++|+| +|.+|++|+.|+.+++||..+++.+..+.+|.+.|.+++| ++.++++++.|+.|++||+..
T Consensus 132 ~~~~~v~~v~~s~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~ 206 (401)
T 4aez_A 132 DESTYVASVKWSH---DGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIA 206 (401)
T ss_dssp CTTCCEEEEEECT---TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSS
T ss_pred CCCCCEEEEEECC---CCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccC
Confidence 4899999999995 8999999999999999999999999999999999999999 457899999999999999984
Q ss_pred CCeeeee-ccCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEee--CCCe
Q 024372 93 GDEKHSF-EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCT--DSGG 169 (268)
Q Consensus 93 ~~~~~~~-~~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~--~d~~ 169 (268)
......+ .|...|.+++|+|+++.|++|+.|+.|++||++++. .......|...+.+++|+|++..++++++ .|+.
T Consensus 207 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~-~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~ 285 (401)
T 4aez_A 207 NHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSI-PKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQ 285 (401)
T ss_dssp SCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSS-EEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCE
T ss_pred cceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCC-ccEEecCCcceEEEEEECCCCCCEEEEecCCCCCE
Confidence 4444444 488899999999999999999999999999998643 23445567889999999998888888865 6899
Q ss_pred EEEEeCCCCceEEeecCCCCEEEEEECCCCcEEEE--e-CCCeEEEEeCCCceeeeEE--eCC-CCceeeEEcCCCCCEE
Q 024372 170 VRLWDARSGKIVQTLETKSPVTSAEVSRDGRYITT--A-DGSSVKFWDANHFGLVKGY--NMP-CNTESASLEPKLGNIF 243 (268)
Q Consensus 170 i~iwd~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~--~-~~~~v~~wd~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~ 243 (268)
|++||+++++++..+.+...+.+++|+|+++++++ + .++.|++||+......... ..+ ..+..+.+++ ++.+|
T Consensus 286 i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~-dg~~l 364 (401)
T 4aez_A 286 IHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSP-DGRIL 364 (401)
T ss_dssp EEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECT-TSSEE
T ss_pred EEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECC-CCCEE
Confidence 99999999999999988888999999999998876 3 5899999999886555443 333 3456677777 69999
Q ss_pred EeccCCCeEEEEECCCCcEEee
Q 024372 244 IAGGEDMWVHVFDFHTGEQIAI 265 (268)
Q Consensus 244 ~~gs~d~~i~~wd~~~g~~~~~ 265 (268)
++|+.|+.|++||+.+++.+..
T Consensus 365 ~s~~~dg~i~iw~~~~~~~~~~ 386 (401)
T 4aez_A 365 STAASDENLKFWRVYDGDHVKR 386 (401)
T ss_dssp EEECTTSEEEEEECCC------
T ss_pred EEEeCCCcEEEEECCCCccccc
Confidence 9999999999999999887653
No 41
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=7.6e-36 Score=249.63 Aligned_cols=252 Identities=16% Similarity=0.183 Sum_probs=209.5
Q ss_pred eecEEeeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCe---EEEee--CccCcEEEEEecCCCcEEEEeeC
Q 024372 7 AVPLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDW---IGTFE--GHKGAVWSCCLDANALFSASGSA 81 (268)
Q Consensus 7 ~~~~~~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~---~~~~~--~h~~~V~~~~~~~~~~~l~s~s~ 81 (268)
..++...+|.++|.+++|+| +|++|++++ |+.+++|+..+++. +..+. +|...|.+++|+|++.++++++.
T Consensus 42 ~~~~~~~~h~~~v~~~~~~~---~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 117 (337)
T 1gxr_A 42 ARQINTLNHGEVVCAVTISN---PTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGE 117 (337)
T ss_dssp EEEEEEECCSSCCCEEEECS---SSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEES
T ss_pred cccceeccCCCceEEEEEec---CCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcC
Confidence 44455568999999999985 899999999 99999999988753 33343 79999999999999999999999
Q ss_pred CCcEEEEeCCCCC--eeeee-ccCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCC
Q 024372 82 DFTAKLWDALTGD--EKHSF-EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQ 158 (268)
Q Consensus 82 D~~v~iw~~~~~~--~~~~~-~~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 158 (268)
|+.|++||+.++. ....+ .|...+.+++|+|+++.+++++.|+.|++||+++++ .......|.+.+.+++|+|++.
T Consensus 118 d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~-~~~~~~~~~~~i~~~~~~~~~~ 196 (337)
T 1gxr_A 118 ASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT-LVRQFQGHTDGASCIDISNDGT 196 (337)
T ss_dssp SSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE-EEEEECCCSSCEEEEEECTTSS
T ss_pred CCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCc-eeeeeecccCceEEEEECCCCC
Confidence 9999999998877 33333 477789999999999999999999999999997653 3345556788999999998765
Q ss_pred cEEEEeeCCCeEEEEeCCCCceEEeecCCCCEEEEEECCCCcEEEEe-CCCeEEEEeCCCceeeeEEeCCCCceeeEEcC
Q 024372 159 TILSSCTDSGGVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYITTA-DGSSVKFWDANHFGLVKGYNMPCNTESASLEP 237 (268)
Q Consensus 159 ~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~-~~~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~ 237 (268)
.+++++.|+.|++||+++++.+..+.+...+.+++|+|++++++++ .++.|++||++..+..........+..+.+++
T Consensus 197 -~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~ 275 (337)
T 1gxr_A 197 -KLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAY 275 (337)
T ss_dssp -EEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEECCCSSCEEEEEECT
T ss_pred -EEEEEecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEEcCCccceeEEEECC
Confidence 5556677899999999999999988888889999999999988764 68999999998876654444444566777777
Q ss_pred CCCCEEEeccCCCeEEEEECCCCcEEee
Q 024372 238 KLGNIFIAGGEDMWVHVFDFHTGEQIAI 265 (268)
Q Consensus 238 ~~~~~~~~gs~d~~i~~wd~~~g~~~~~ 265 (268)
++++|++++.|+.|++||+.+++.+..
T Consensus 276 -~~~~l~~~~~dg~i~~~~~~~~~~~~~ 302 (337)
T 1gxr_A 276 -CGKWFVSTGKDNLLNAWRTPYGASIFQ 302 (337)
T ss_dssp -TSSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred -CCCEEEEecCCCcEEEEECCCCeEEEE
Confidence 699999999999999999999887643
No 42
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.5e-35 Score=257.10 Aligned_cols=249 Identities=15% Similarity=0.255 Sum_probs=212.1
Q ss_pred eecEEeeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCCCcEE
Q 024372 7 AVPLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAK 86 (268)
Q Consensus 7 ~~~~~~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~ 86 (268)
...+.+++|...|++++|+| +|++||+|+.|++|++||..+++.+.++.+|...|.++++. +.++++|+.|+.++
T Consensus 138 ~~~~~~~~~~~~V~sv~fsp---dg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~ 212 (420)
T 4gga_A 138 LQLLQMEQPGEYISSVAWIK---EGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWN--SYILSSGSRSGHIH 212 (420)
T ss_dssp EEEEECCSTTCCEEEEEECT---TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEE
T ss_pred EEEEEecCCCCcEEEEEECC---CCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeC--CCEEEEEeCCCcee
Confidence 34444568899999999985 99999999999999999999999999999999999888774 67899999999999
Q ss_pred EEeCCCCCe-eeee-ccCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCC---CCeEecCCcccEEEEEEeCCCCcEE
Q 024372 87 LWDALTGDE-KHSF-EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDA---PPREVGNSSGSIRTVAWLHSDQTIL 161 (268)
Q Consensus 87 iw~~~~~~~-~~~~-~~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~ 161 (268)
+||...... ...+ .|...+..+.++|+++.+++++.|+.+++|+...++. .......+.+.|.+++|+|.+..++
T Consensus 213 ~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~l 292 (420)
T 4gga_A 213 HHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVL 292 (420)
T ss_dssp EEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEE
T ss_pred EeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEE
Confidence 999876553 3333 4888999999999999999999999999999876542 2345567888999999999888877
Q ss_pred EE--eeCCCeEEEEeCCCCceEEeecCCCCEEEEEECCCCcEEEEe---CCCeEEEEeCCCceeeeEEeCCCC-ceeeEE
Q 024372 162 SS--CTDSGGVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYITTA---DGSSVKFWDANHFGLVKGYNMPCN-TESASL 235 (268)
Q Consensus 162 ~~--~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~---~~~~v~~wd~~~~~~~~~~~~~~~-~~~~~~ 235 (268)
++ |+.|++|++||+++++++..+..+..+.++.++|+++.++++ .|+.|++||+.+++++..+..+.. +..+++
T Consensus 293 a~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~ 372 (420)
T 4gga_A 293 ATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTM 372 (420)
T ss_dssp EEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEE
T ss_pred EEEeecCCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEE
Confidence 65 457899999999999999999988899999999999887643 478999999999999988887654 456677
Q ss_pred cCCCCCEEEeccCCCeEEEEECCCCc
Q 024372 236 EPKLGNIFIAGGEDMWVHVFDFHTGE 261 (268)
Q Consensus 236 ~~~~~~~~~~gs~d~~i~~wd~~~g~ 261 (268)
+| +|++|++||.|+.|++||+...+
T Consensus 373 sp-dg~~l~S~s~D~tvriWdv~~~~ 397 (420)
T 4gga_A 373 SP-DGATVASAAADETLRLWRCFELD 397 (420)
T ss_dssp CT-TSSCEEEEETTTEEEEECCSCSS
T ss_pred cC-CCCEEEEEecCCeEEEEECCCCC
Confidence 76 79999999999999999986544
No 43
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.2e-35 Score=249.24 Aligned_cols=247 Identities=26% Similarity=0.377 Sum_probs=209.1
Q ss_pred EEeeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCCCcEEEEe
Q 024372 10 LVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWD 89 (268)
Q Consensus 10 ~~~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw~ 89 (268)
..+.+|..+|.+++|+| +|++|++|+.|+.+++|+...+........+...+..+.+++++.++++++.|+.+++||
T Consensus 80 ~~l~~h~~~V~~~~~s~---dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d 156 (340)
T 4aow_A 80 RALRGHSHFVSDVVISS---DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN 156 (340)
T ss_dssp EEECCCSSCEEEEEECT---TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEEeCCCCCEEEEEECC---CCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEE
Confidence 45679999999999985 899999999999999999999998888888999999999999999999999999999999
Q ss_pred CCCCCeeeee--ccCCeEEEEEECCCC--CEEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEee
Q 024372 90 ALTGDEKHSF--EHKHIVRACAFSEDT--HLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCT 165 (268)
Q Consensus 90 ~~~~~~~~~~--~~~~~v~~v~~~~~~--~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 165 (268)
.......... .|...+..++|++++ .++++++.|+.|++||++.... ......|.+.|.+++|+|++. ++++++
T Consensus 157 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~-~~~~~~h~~~v~~~~~s~~~~-~l~s~s 234 (340)
T 4aow_A 157 TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKL-KTNHIGHTGYLNTVTVSPDGS-LCASGG 234 (340)
T ss_dssp TTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEE-EEEECCCSSCEEEEEECTTSS-EEEEEE
T ss_pred eCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCce-eeEecCCCCcEEEEEECCCCC-EEEEEe
Confidence 8765543332 477889999998754 6788999999999999976543 345556888999999998765 566777
Q ss_pred CCCeEEEEeCCCCceEEeecCCCCEEEEEECCCCcEEEEeCCCeEEEEeCCCceeeeEEeC----------CCCceeeEE
Q 024372 166 DSGGVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGYNM----------PCNTESASL 235 (268)
Q Consensus 166 ~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~v~~wd~~~~~~~~~~~~----------~~~~~~~~~ 235 (268)
.|+.|++||+++.+++..+..+..+.++.++|++.+++++.|+.|++||++....+..+.. ...+.++++
T Consensus 235 ~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 314 (340)
T 4aow_A 235 KDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAW 314 (340)
T ss_dssp TTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEE
T ss_pred CCCeEEEEEeccCceeeeecCCceEEeeecCCCCceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEE
Confidence 8899999999999999999988899999999999999999999999999998776655532 223456677
Q ss_pred cCCCCCEEEeccCCCeEEEEECCCCcE
Q 024372 236 EPKLGNIFIAGGEDMWVHVFDFHTGEQ 262 (268)
Q Consensus 236 ~~~~~~~~~~gs~d~~i~~wd~~~g~~ 262 (268)
+| ++++|++|+.|+.|++||+++|.+
T Consensus 315 s~-dg~~l~sgs~Dg~v~iW~~~tGtr 340 (340)
T 4aow_A 315 SA-DGQTLFAGYTDNLVRVWQVTIGTR 340 (340)
T ss_dssp CT-TSSEEEEEETTSCEEEEEEEC---
T ss_pred CC-CCCEEEEEeCCCEEEEEeCCCcCC
Confidence 77 699999999999999999999863
No 44
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=2.7e-36 Score=280.96 Aligned_cols=256 Identities=19% Similarity=0.229 Sum_probs=222.4
Q ss_pred eecEEeeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCCCcEE
Q 024372 7 AVPLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAK 86 (268)
Q Consensus 7 ~~~~~~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~ 86 (268)
.....+.+|++.|.+++|+| +|.+||+|+.|++|++||..+++.+.++.+|.++|.+++|+|++.++++++.|+.|+
T Consensus 4 ~~~~~~~~h~~~v~~i~~sp---~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~ 80 (814)
T 3mkq_A 4 DIKKTFSNRSDRVKGIDFHP---TEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIR 80 (814)
T ss_dssp CCEEEEEEECSCEEEEEECS---SSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEE
T ss_pred ccceeeecCCCceEEEEECC---CCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEE
Confidence 34456789999999999995 899999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCCeeeeec-cCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEee
Q 024372 87 LWDALTGDEKHSFE-HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCT 165 (268)
Q Consensus 87 iw~~~~~~~~~~~~-~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 165 (268)
+||+.++.....+. |...|.+++|+|+++.|++++.|+.|++||+..+.........|...+.+++|+|.++..+++++
T Consensus 81 vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~ 160 (814)
T 3mkq_A 81 VFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGC 160 (814)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEE
T ss_pred EEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEe
Confidence 99999999887775 88899999999999999999999999999997654444556678889999999995566777788
Q ss_pred CCCeEEEEeCCCCceEEeecC-C-CCEEEEEECC--CCcEEEEe-CCCeEEEEeCCCceeeeEEeCCCC-ceeeEEcCCC
Q 024372 166 DSGGVRLWDARSGKIVQTLET-K-SPVTSAEVSR--DGRYITTA-DGSSVKFWDANHFGLVKGYNMPCN-TESASLEPKL 239 (268)
Q Consensus 166 ~d~~i~iwd~~~~~~~~~~~~-~-~~v~~~~~s~--~g~~l~~~-~~~~v~~wd~~~~~~~~~~~~~~~-~~~~~~~~~~ 239 (268)
.||.|++||+++++....+.. + ..+.+++|+| ++.+++++ .++.|++||++....+..+..+.. +..+.++| +
T Consensus 161 ~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~-~ 239 (814)
T 3mkq_A 161 LDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHP-T 239 (814)
T ss_dssp TTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECS-S
T ss_pred CCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcC-C
Confidence 889999999998887766653 2 6789999999 88887765 689999999999888888876544 45666666 6
Q ss_pred CCEEEeccCCCeEEEEECCCCcEEeec
Q 024372 240 GNIFIAGGEDMWVHVFDFHTGEQIAIT 266 (268)
Q Consensus 240 ~~~~~~gs~d~~i~~wd~~~g~~~~~~ 266 (268)
+.++++|+.|+.|++||+.+++.+..+
T Consensus 240 ~~~l~~~~~dg~v~vwd~~~~~~~~~~ 266 (814)
T 3mkq_A 240 LPIIISGSEDGTLKIWNSSTYKVEKTL 266 (814)
T ss_dssp SSEEEEEETTSCEEEEETTTCSEEEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEe
Confidence 999999999999999999988877653
No 45
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=3.9e-37 Score=268.28 Aligned_cols=250 Identities=18% Similarity=0.164 Sum_probs=195.4
Q ss_pred eeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCC--eEEEeeCccCcEEEEEecC-CCcEEEEeeCCCcEEEE
Q 024372 12 CHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGD--WIGTFEGHKGAVWSCCLDA-NALFSASGSADFTAKLW 88 (268)
Q Consensus 12 ~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~--~~~~~~~h~~~V~~~~~~~-~~~~l~s~s~D~~v~iw 88 (268)
..+|...|++|+|+|. ++++||+|+.||+|+|||..+++ .+..+.+|.+.|.+++|+| ++.+|+|||.|++|++|
T Consensus 115 ~~~~~~~V~~l~~~P~--~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iw 192 (435)
T 4e54_B 115 AAPFDRRATSLAWHPT--HPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQ 192 (435)
T ss_dssp EEECSSCEEEEEECSS--CTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEE
T ss_pred CCCCCCCEEEEEEeCC--CCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEe
Confidence 4579999999999983 56799999999999999998775 4455678999999999997 67899999999999999
Q ss_pred eCCCCCeeeeec---cCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEee
Q 024372 89 DALTGDEKHSFE---HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCT 165 (268)
Q Consensus 89 ~~~~~~~~~~~~---~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 165 (268)
|+.++....... +...+.+++|+|++++|++|+.|+.|++||++.. ....+..|.+.|.+++|+|.+..++++++
T Consensus 193 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~--~~~~~~~h~~~v~~v~~~p~~~~~~~s~s 270 (435)
T 4e54_B 193 DFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGK--ELWNLRMHKKKVTHVALNPCCDWFLATAS 270 (435)
T ss_dssp ETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSC--BCCCSBCCSSCEEEEEECTTCSSEEEEEE
T ss_pred eccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcc--eeEEEecccceEEeeeecCCCceEEEEec
Confidence 998765444333 2335778999999999999999999999998643 23344567889999999999888998999
Q ss_pred CCCeEEEEeCCCCceEEee----cCCCCEEEEEECCCCcEEEE-eCCCeEEEEeCCCceeeeEEeCCC-------Cceee
Q 024372 166 DSGGVRLWDARSGKIVQTL----ETKSPVTSAEVSRDGRYITT-ADGSSVKFWDANHFGLVKGYNMPC-------NTESA 233 (268)
Q Consensus 166 ~d~~i~iwd~~~~~~~~~~----~~~~~v~~~~~s~~g~~l~~-~~~~~v~~wd~~~~~~~~~~~~~~-------~~~~~ 233 (268)
.|+.|+|||+++.+....+ .+..+|.+++|+|+|++|++ +.|+.|++||++.+.....+..+. .....
T Consensus 271 ~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (435)
T 4e54_B 271 VDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKA 350 (435)
T ss_dssp TTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBC
T ss_pred CcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEE
Confidence 9999999999987654333 35567999999999998875 578999999999877655443221 11223
Q ss_pred EEcCCCCCEEEec------------cCCCeEEEEECCCCcEEeec
Q 024372 234 SLEPKLGNIFIAG------------GEDMWVHVFDFHTGEQIAIT 266 (268)
Q Consensus 234 ~~~~~~~~~~~~g------------s~d~~i~~wd~~~g~~~~~~ 266 (268)
.+.+ .+.+++++ ..++.|++||..+|+.+...
T Consensus 351 ~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l 394 (435)
T 4e54_B 351 AWHP-RYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQL 394 (435)
T ss_dssp EECS-SSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEE
T ss_pred EEcC-CCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEE
Confidence 3333 23333333 34568999999999987653
No 46
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1e-37 Score=266.11 Aligned_cols=247 Identities=12% Similarity=0.101 Sum_probs=195.7
Q ss_pred eeecEEeeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCC--CeEEEeeCccCcEEEEEecCCCcEEEEeeCCC
Q 024372 6 VAVPLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETG--DWIGTFEGHKGAVWSCCLDANALFSASGSADF 83 (268)
Q Consensus 6 ~~~~~~~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~--~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~ 83 (268)
|+.|.++..|.++|++++|+| +|++||+|+.|++|++|+..++ +.+..+.+|.+.|.+++|+|++.+|++++.|+
T Consensus 1 m~~~~~~~~~~~~v~~~~~s~---~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~ 77 (377)
T 3dwl_C 1 MATSQVLHILPKPSYEHAFNS---QRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDR 77 (377)
T ss_dssp -CCEEEEEECSSCCSCCEECS---SSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTS
T ss_pred CCcceeEecCCCcEEEEEECC---CCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCC
Confidence 356677777899999999995 8999999999999999999988 78889999999999999999999999999999
Q ss_pred cEEEEeCCCCC---e-eeeeccCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCC--CCeEecC-CcccEEEEEEeCC
Q 024372 84 TAKLWDALTGD---E-KHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDA--PPREVGN-SSGSIRTVAWLHS 156 (268)
Q Consensus 84 ~v~iw~~~~~~---~-~~~~~~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~--~~~~~~~-~~~~v~~~~~~~~ 156 (268)
+|++||+.++. . .....|...|.+++|+|+++.|++++.|+.|++||++.+.. ....+.. |.+.+.+++|+|+
T Consensus 78 ~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 157 (377)
T 3dwl_C 78 NAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPN 157 (377)
T ss_dssp SEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTT
T ss_pred eEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCC
Confidence 99999998876 3 33345888999999999999999999999999999986542 2344545 8899999999987
Q ss_pred CCcEEEEeeCCCeEEEEeCC------------------CCceEEeecCCCCEEEEEECCCCcEEEE-eCCCeEEEEeCCC
Q 024372 157 DQTILSSCTDSGGVRLWDAR------------------SGKIVQTLETKSPVTSAEVSRDGRYITT-ADGSSVKFWDANH 217 (268)
Q Consensus 157 ~~~~~~~~~~d~~i~iwd~~------------------~~~~~~~~~~~~~v~~~~~s~~g~~l~~-~~~~~v~~wd~~~ 217 (268)
+. ++++++.|+.|++||++ .++++..+.+...+.+++|+|++++|++ +.|+.|++||++.
T Consensus 158 ~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~ 236 (377)
T 3dwl_C 158 NV-LLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSA 236 (377)
T ss_dssp SS-EEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETTTEEC-CEECS
T ss_pred CC-EEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCCCcEEEEECCC
Confidence 65 56667778999999985 3556666655667999999999998765 5789999999988
Q ss_pred cee----eeEEeCCCC-ceeeEEcCCCCCEEEeccCCCeEEEEECC
Q 024372 218 FGL----VKGYNMPCN-TESASLEPKLGNIFIAGGEDMWVHVFDFH 258 (268)
Q Consensus 218 ~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~gs~d~~i~~wd~~ 258 (268)
.+. +..+..+.. +..+.+++ ++++|++|+.|+.+ +|+..
T Consensus 237 ~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 237 PEQPPRALITVKLSQLPLRSLLWAN-ESAIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp TTSCEEECCCEECSSSCEEEEEEEE-TTEEEEEESSSSEE-EECCC
T ss_pred CCCcceeeEeecCCCCceEEEEEcC-CCCEEEEEcCCcEE-EEEeC
Confidence 766 666665544 56677777 68999999888766 66554
No 47
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-36 Score=261.37 Aligned_cols=250 Identities=17% Similarity=0.269 Sum_probs=209.0
Q ss_pred cEEeeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCC----CCeEEEeeCccCcEEEEEecCC-CcEEEEeeCCC
Q 024372 9 PLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGET----GDWIGTFEGHKGAVWSCCLDAN-ALFSASGSADF 83 (268)
Q Consensus 9 ~~~~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~----~~~~~~~~~h~~~V~~~~~~~~-~~~l~s~s~D~ 83 (268)
++....|...|.+++|+| +|++|++|+.|+++++|+..+ .+.+..+.+|.+.|.+++|+|+ +.++++++.|+
T Consensus 60 ~~~~~~~~~~v~~~~~s~---~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg 136 (416)
T 2pm9_A 60 PIASLQVDSKFNDLDWSH---NNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNG 136 (416)
T ss_dssp CSCCCCCSSCEEEEEECS---SSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSS
T ss_pred EEEEEecCCceEEEEECC---CCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCC
Confidence 444457999999999985 899999999999999999988 4588899999999999999998 88999999999
Q ss_pred cEEEEeCCCCC------eeee----eccCCeEEEEEECCC-CCEEEEeeCCCeEEEEECCCCCCCCeEecCC------cc
Q 024372 84 TAKLWDALTGD------EKHS----FEHKHIVRACAFSED-THLLLTGGFEKILRIFDLNRPDAPPREVGNS------SG 146 (268)
Q Consensus 84 ~v~iw~~~~~~------~~~~----~~~~~~v~~v~~~~~-~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~------~~ 146 (268)
.|++||+.++. .... ..|...|.+++|+|+ +.++++++.|+.|++||++.++. ......+ ..
T Consensus 137 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~-~~~~~~~~~~~~~~~ 215 (416)
T 2pm9_A 137 EIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKE-VIHLSYTSPNSGIKQ 215 (416)
T ss_dssp CEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEE-EEEECCCCCSSCCCC
T ss_pred eEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCc-ceEEeccccccccCC
Confidence 99999998876 3332 247788999999998 78999999999999999986543 2333333 67
Q ss_pred cEEEEEEeCCCCcEEEEeeCCC---eEEEEeCCCC-ceEEeec--CCCCEEEEEECC-CCcEEEE-eCCCeEEEEeCCCc
Q 024372 147 SIRTVAWLHSDQTILSSCTDSG---GVRLWDARSG-KIVQTLE--TKSPVTSAEVSR-DGRYITT-ADGSSVKFWDANHF 218 (268)
Q Consensus 147 ~v~~~~~~~~~~~~~~~~~~d~---~i~iwd~~~~-~~~~~~~--~~~~v~~~~~s~-~g~~l~~-~~~~~v~~wd~~~~ 218 (268)
.+.+++|+|++..++++++.|+ .|++||++++ +.+..+. +...+.+++|+| +++++++ +.|+.|++||+++.
T Consensus 216 ~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~ 295 (416)
T 2pm9_A 216 QLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESA 295 (416)
T ss_dssp CEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSC
T ss_pred ceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCC
Confidence 8999999998877888888888 9999999986 5666665 556799999999 8887765 56899999999999
Q ss_pred eeeeEEeCCC-CceeeEEcCCCCCEEEeccCCCeEEEEECCCCcE
Q 024372 219 GLVKGYNMPC-NTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQ 262 (268)
Q Consensus 219 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~gs~d~~i~~wd~~~g~~ 262 (268)
+.+..+..+. .+..+.++|+.+.+|++++.|+.|++||+.+++.
T Consensus 296 ~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~ 340 (416)
T 2pm9_A 296 EQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTN 340 (416)
T ss_dssp CEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCC
T ss_pred ccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCC
Confidence 8888887654 4567778874338999999999999999987653
No 48
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.7e-35 Score=265.71 Aligned_cols=236 Identities=28% Similarity=0.440 Sum_probs=200.3
Q ss_pred EEeeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCCCcEEEEe
Q 024372 10 LVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWD 89 (268)
Q Consensus 10 ~~~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw~ 89 (268)
..+.+|..+|.+++|+| +|++|++|+.|+++++|+. +++++.++.+|...|.+++|+|++.++++++.|+.|++||
T Consensus 338 ~~~~~~~~~v~~~~~s~---~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~ 413 (577)
T 2ymu_A 338 QTLTGHSSSVWGVAFSP---DGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWN 413 (577)
T ss_dssp EEECCCSSCEEEEEECT---TSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EEEeCCCCCEEEEEECC---CCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEe
Confidence 44568999999999985 8999999999999999994 6788999999999999999999999999999999999999
Q ss_pred CCCCCeeee-eccCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEeeCCC
Q 024372 90 ALTGDEKHS-FEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSG 168 (268)
Q Consensus 90 ~~~~~~~~~-~~~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~ 168 (268)
.. ++.... ..|...|.+++|+|+++.|++++.|+.+++||... ........|...+.+++|+|++. ++++++.|+
T Consensus 414 ~~-~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~--~~~~~~~~~~~~v~~~~~spd~~-~las~~~d~ 489 (577)
T 2ymu_A 414 RN-GQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNG--QLLQTLTGHSSSVRGVAFSPDGQ-TIASASDDK 489 (577)
T ss_dssp TT-CCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTS--CEEEEEECCSSCEEEEEECTTSC-EEEEEETTS
T ss_pred CC-CCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCC--CEEEEEcCCCCCEEEEEEcCCCC-EEEEEeCCC
Confidence 64 444444 45888999999999999999999999999999743 23445567888999999998775 566667889
Q ss_pred eEEEEeCCCCceEEeecC-CCCEEEEEECCCCcEEEE-eCCCeEEEEeCCCceeeeEEeCCCC-ceeeEEcCCCCCEEEe
Q 024372 169 GVRLWDARSGKIVQTLET-KSPVTSAEVSRDGRYITT-ADGSSVKFWDANHFGLVKGYNMPCN-TESASLEPKLGNIFIA 245 (268)
Q Consensus 169 ~i~iwd~~~~~~~~~~~~-~~~v~~~~~s~~g~~l~~-~~~~~v~~wd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 245 (268)
.|++||. ++++++.+.. ...|.+++|+|+|++|++ +.|+.|++||. +.+++..+..+.. +..+.++| ++++|++
T Consensus 490 ~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~-dg~~l~s 566 (577)
T 2ymu_A 490 TVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSP-DGQTIAS 566 (577)
T ss_dssp EEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECT-TSSCEEE
T ss_pred EEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEcCCCCCEEEEEEcC-CCCEEEE
Confidence 9999995 6788888864 467999999999998876 57899999996 5667777776554 55677776 6999999
Q ss_pred ccCCCeEEEEE
Q 024372 246 GGEDMWVHVFD 256 (268)
Q Consensus 246 gs~d~~i~~wd 256 (268)
||.|+.|++||
T Consensus 567 ~~~D~~i~~Wd 577 (577)
T 2ymu_A 567 ASSDKTVKLWN 577 (577)
T ss_dssp EETTSCEEEEC
T ss_pred EeCCCEEEEeC
Confidence 99999999997
No 49
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=2.6e-35 Score=252.62 Aligned_cols=253 Identities=18% Similarity=0.221 Sum_probs=203.9
Q ss_pred cEEeeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEee-------------CccCcEEEEEecC-CCc
Q 024372 9 PLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFE-------------GHKGAVWSCCLDA-NAL 74 (268)
Q Consensus 9 ~~~~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~-------------~h~~~V~~~~~~~-~~~ 74 (268)
...+.+|.++|++++|+| .+|++|++|+.|++|++|+..+++....+. +|...|.+++|+| ++.
T Consensus 36 ~~~~~~h~~~v~~~~~s~--~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 113 (408)
T 4a11_B 36 RDVERIHGGGINTLDIEP--VEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTG 113 (408)
T ss_dssp EEECCCCSSCEEEEEECT--TTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTT
T ss_pred eeeeeccCCcEEEEEEec--CCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCc
Confidence 345568999999999984 278999999999999999999887654443 5999999999999 777
Q ss_pred EEEEeeCCCcEEEEeCCCCCeeeeeccCCeEEEEEECCC---CCEEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEE
Q 024372 75 FSASGSADFTAKLWDALTGDEKHSFEHKHIVRACAFSED---THLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTV 151 (268)
Q Consensus 75 ~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~v~~v~~~~~---~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~ 151 (268)
++++++.|+.|++||+.++.....+.+...+.++.+++. +.++++++.|+.+++||++.+.. ...+..|.+.+.++
T Consensus 114 ~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~-~~~~~~~~~~v~~~ 192 (408)
T 4a11_B 114 MFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSC-SHILQGHRQEILAV 192 (408)
T ss_dssp CEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCC-CEEECCCCSCEEEE
T ss_pred EEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcce-eeeecCCCCcEEEE
Confidence 999999999999999999999998889999999999884 45999999999999999987643 45566688899999
Q ss_pred EEeCCCCcEEEEeeCCCeEEEEeCCCCc-eEEee----------------cCCCCEEEEEECCCCcEEEE-eCCCeEEEE
Q 024372 152 AWLHSDQTILSSCTDSGGVRLWDARSGK-IVQTL----------------ETKSPVTSAEVSRDGRYITT-ADGSSVKFW 213 (268)
Q Consensus 152 ~~~~~~~~~~~~~~~d~~i~iwd~~~~~-~~~~~----------------~~~~~v~~~~~s~~g~~l~~-~~~~~v~~w 213 (268)
+|+|++..++++++.||.|++||+++++ ++..+ .+...+.+++|+|+++++++ +.|+.|++|
T Consensus 193 ~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vw 272 (408)
T 4a11_B 193 SWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLW 272 (408)
T ss_dssp EECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred EECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEE
Confidence 9999988878888889999999998875 44443 23456999999999998765 568999999
Q ss_pred eCCCcee-----------------------------------------------eeEEeCCC-CceeeEEcCCCCCEEEe
Q 024372 214 DANHFGL-----------------------------------------------VKGYNMPC-NTESASLEPKLGNIFIA 245 (268)
Q Consensus 214 d~~~~~~-----------------------------------------------~~~~~~~~-~~~~~~~~~~~~~~~~~ 245 (268)
|+++.+. +..+..+. .+..+.+++ ++++|++
T Consensus 273 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s 351 (408)
T 4a11_B 273 NSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQS-NFQELYS 351 (408)
T ss_dssp ETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEET-TTTEEEE
T ss_pred ECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcC-CCCEEEE
Confidence 9875432 22233222 345566776 6999999
Q ss_pred ccCCCeEEEEECCCCcEEee
Q 024372 246 GGEDMWVHVFDFHTGEQIAI 265 (268)
Q Consensus 246 gs~d~~i~~wd~~~g~~~~~ 265 (268)
|+.|+.|++||+.+++++..
T Consensus 352 ~~~dg~i~iw~~~~~~~~~~ 371 (408)
T 4a11_B 352 GSRDCNILAWVPSLYEPVPD 371 (408)
T ss_dssp EETTSCEEEEEECC------
T ss_pred ECCCCeEEEEeCCCCCccCC
Confidence 99999999999999887654
No 50
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=4.2e-36 Score=254.90 Aligned_cols=251 Identities=16% Similarity=0.134 Sum_probs=203.9
Q ss_pred ecEEeeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEE--eeCccCcEEEEEecCCCcEEEEeeCCCcE
Q 024372 8 VPLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGT--FEGHKGAVWSCCLDANALFSASGSADFTA 85 (268)
Q Consensus 8 ~~~~~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~--~~~h~~~V~~~~~~~~~~~l~s~s~D~~v 85 (268)
....+.+|..+|.+++|+| +|++|++++.|+++++||..+++.... +..|...|.+++|+|++.++++++.|+.|
T Consensus 44 ~~~~~~~h~~~v~~~~~~~---~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v 120 (372)
T 1k8k_C 44 QVHELKEHNGQVTGVDWAP---DSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVI 120 (372)
T ss_dssp EEEEEECCSSCEEEEEEET---TTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSE
T ss_pred eeeeecCCCCcccEEEEeC---CCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEE
Confidence 5556678999999999996 889999999999999999998875544 46799999999999999999999999999
Q ss_pred EEEeCCCCCe---eee--eccCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCC-----------------CCCCeEecC
Q 024372 86 KLWDALTGDE---KHS--FEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRP-----------------DAPPREVGN 143 (268)
Q Consensus 86 ~iw~~~~~~~---~~~--~~~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~-----------------~~~~~~~~~ 143 (268)
++||+..... ... ..|...|.+++|+|+++.+++++.|+.+++||++.. ......+..
T Consensus 121 ~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (372)
T 1k8k_C 121 SICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSS 200 (372)
T ss_dssp EEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCC
T ss_pred EEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCC
Confidence 9999987763 222 246789999999999999999999999999996421 122234446
Q ss_pred CcccEEEEEEeCCCCcEEEEeeCCCeEEEEeCCCCceEEeecCC-CCEEEEEECCCCcEEEEeCCCeEEEEeCCC--ce-
Q 024372 144 SSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLETK-SPVTSAEVSRDGRYITTADGSSVKFWDANH--FG- 219 (268)
Q Consensus 144 ~~~~v~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~-~~v~~~~~s~~g~~l~~~~~~~v~~wd~~~--~~- 219 (268)
|.+.+.+++|+|++. ++++++.|+.|++||+++++++..+..+ .++.+++|+|++++++++.|+.|++||++. ..
T Consensus 201 ~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~i~~~~~~~~~~ 279 (372)
T 1k8k_C 201 SCGWVHGVCFSANGS-RVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKL 279 (372)
T ss_dssp CSSCEEEEEECSSSS-EEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEETTSSCEEEEEETTTTEE
T ss_pred CCCeEEEEEECCCCC-EEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEEeCCeEEEEEccCcCceE
Confidence 778999999998775 5556677899999999999999888754 579999999999999999999999999976 21
Q ss_pred -ee------------------------------------eEE-eCC-CCceeeEEcCCCC---CEEEeccCCCeEEEEEC
Q 024372 220 -LV------------------------------------KGY-NMP-CNTESASLEPKLG---NIFIAGGEDMWVHVFDF 257 (268)
Q Consensus 220 -~~------------------------------------~~~-~~~-~~~~~~~~~~~~~---~~~~~gs~d~~i~~wd~ 257 (268)
.+ ..+ ..+ ..+..+++++++| .+|++|+.|+.|++||+
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~ 359 (372)
T 1k8k_C 280 SFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDV 359 (372)
T ss_dssp EECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEH
T ss_pred EEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEe
Confidence 11 111 122 2345566676677 99999999999999999
Q ss_pred CCCcE
Q 024372 258 HTGEQ 262 (268)
Q Consensus 258 ~~g~~ 262 (268)
.++++
T Consensus 360 ~~~~~ 364 (372)
T 1k8k_C 360 RSLES 364 (372)
T ss_dssp HHHHH
T ss_pred cChhH
Confidence 87664
No 51
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.3e-35 Score=251.82 Aligned_cols=244 Identities=12% Similarity=0.140 Sum_probs=205.7
Q ss_pred EEeeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCC--eEEEeeCccCcEEEEEecCCCcEEEEeeCCCcEEE
Q 024372 10 LVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGD--WIGTFEGHKGAVWSCCLDANALFSASGSADFTAKL 87 (268)
Q Consensus 10 ~~~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~--~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~i 87 (268)
.++..|.++|.+++|+| +|++|++|+.|+.|++|+..+++ .+..+.+|...|.+++|+|++.++++++.|+.|++
T Consensus 2 ~~~~~~~~~i~~~~~s~---~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~v 78 (372)
T 1k8k_C 2 AYHSFLVEPISCHAWNK---DRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYV 78 (372)
T ss_dssp CEEESCSSCCCEEEECT---TSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEE
T ss_pred ceecccCCCeEEEEECC---CCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEE
Confidence 34566999999999985 89999999999999999999987 88999999999999999999999999999999999
Q ss_pred EeCCCCCeeee---eccCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCC---CCeEecCCcccEEEEEEeCCCCcEE
Q 024372 88 WDALTGDEKHS---FEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDA---PPREVGNSSGSIRTVAWLHSDQTIL 161 (268)
Q Consensus 88 w~~~~~~~~~~---~~~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~ 161 (268)
||+.+++.... ..|...|.+++|+|+++.|++++.|+.+++||++.... .......|...+.+++|+|++. ++
T Consensus 79 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l 157 (372)
T 1k8k_C 79 WTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSV-LL 157 (372)
T ss_dssp EEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSS-EE
T ss_pred EECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCC-EE
Confidence 99988774443 35788999999999999999999999999999876542 1122245678999999998765 56
Q ss_pred EEeeCCCeEEEEeCC------------------CCceEEeec-CCCCEEEEEECCCCcEEEE-eCCCeEEEEeCCCceee
Q 024372 162 SSCTDSGGVRLWDAR------------------SGKIVQTLE-TKSPVTSAEVSRDGRYITT-ADGSSVKFWDANHFGLV 221 (268)
Q Consensus 162 ~~~~~d~~i~iwd~~------------------~~~~~~~~~-~~~~v~~~~~s~~g~~l~~-~~~~~v~~wd~~~~~~~ 221 (268)
++++.|+.|++||++ +++++..+. +...+.+++|+|+++++++ +.|+.|++||+++.+++
T Consensus 158 ~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 237 (372)
T 1k8k_C 158 AAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAV 237 (372)
T ss_dssp EEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEE
T ss_pred EEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCcee
Confidence 666778999999954 678888885 4467999999999988765 57899999999998888
Q ss_pred eEEeCCC-CceeeEEcCCCCCEEEeccCCCeEEEEECCC
Q 024372 222 KGYNMPC-NTESASLEPKLGNIFIAGGEDMWVHVFDFHT 259 (268)
Q Consensus 222 ~~~~~~~-~~~~~~~~~~~~~~~~~gs~d~~i~~wd~~~ 259 (268)
..+..+. ....+.+.+ ++.++++| .|+.|++||+.+
T Consensus 238 ~~~~~~~~~v~~~~~~~-~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 238 ATLASETLPLLAVTFIT-ESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp EEEECSSCCEEEEEEEE-TTEEEEEE-TTSSCEEEEEET
T ss_pred EEEccCCCCeEEEEEec-CCCEEEEE-eCCeEEEEEccC
Confidence 8887655 456677776 58877777 899999999987
No 52
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.1e-35 Score=242.40 Aligned_cols=247 Identities=17% Similarity=0.254 Sum_probs=205.8
Q ss_pred eecEEeeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCCCcEE
Q 024372 7 AVPLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAK 86 (268)
Q Consensus 7 ~~~~~~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~ 86 (268)
.....+.+|.++|++++| | ++.+|++|+.|++|++||..+++....+..|.+.|.+++|+|++.++++++.|+.++
T Consensus 9 ~~~~~l~~h~~~v~~~~~-~---~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 84 (313)
T 3odt_A 9 QLSATLKGHDQDVRDVVA-V---DDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMIN 84 (313)
T ss_dssp EEEEEECCCSSCEEEEEE-E---ETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEE
T ss_pred HHHHHhhCCCCCcEEEEe-c---CCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEE
Confidence 344556799999999999 5 788999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCC---eeeee-ccCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEE
Q 024372 87 LWDALTGD---EKHSF-EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILS 162 (268)
Q Consensus 87 iw~~~~~~---~~~~~-~~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 162 (268)
+|++.... ....+ .|...|.++.| +++.+++++.|+.+++||.. ........|...+.++.+.+.++.+++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d~~---~~~~~~~~~~~~v~~~~~~~~~~~~l~ 159 (313)
T 3odt_A 85 GVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWKEG---SLVYNLQAHNASVWDAKVVSFSENKFL 159 (313)
T ss_dssp EEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETT---EEEEEEECCSSCEEEEEEEETTTTEEE
T ss_pred EEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEcCC---cEEEecccCCCceeEEEEccCCCCEEE
Confidence 99987653 23333 47889999999 57799999999999999932 233455567889999999985666777
Q ss_pred EeeCCCeEEEEeCCCCceEEeec--CCCCEEEEEECCCCcEEEEeCCCeEEEEeCCCceeeeEEeCCCC-ceeeEEcCCC
Q 024372 163 SCTDSGGVRLWDARSGKIVQTLE--TKSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGYNMPCN-TESASLEPKL 239 (268)
Q Consensus 163 ~~~~d~~i~iwd~~~~~~~~~~~--~~~~v~~~~~s~~g~~l~~~~~~~v~~wd~~~~~~~~~~~~~~~-~~~~~~~~~~ 239 (268)
+++.|+.|++|| .++.+..+. +...+.+++++|++.+++++.++.|++||+++.+.+..+..+.. ...+.+.+ +
T Consensus 160 ~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~-~ 236 (313)
T 3odt_A 160 TASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLP-N 236 (313)
T ss_dssp EEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECT-T
T ss_pred EEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEec-C
Confidence 888889999999 445555554 55679999999999977778899999999999988888875544 55667776 4
Q ss_pred CCEEEeccCCCeEEEEECCCCcEEeec
Q 024372 240 GNIFIAGGEDMWVHVFDFHTGEQIAIT 266 (268)
Q Consensus 240 ~~~~~~gs~d~~i~~wd~~~g~~~~~~ 266 (268)
+ .|++|+.|+.|++||+.+++.+..+
T Consensus 237 ~-~l~~~~~dg~v~iwd~~~~~~~~~~ 262 (313)
T 3odt_A 237 G-DIVSCGEDRTVRIWSKENGSLKQVI 262 (313)
T ss_dssp S-CEEEEETTSEEEEECTTTCCEEEEE
T ss_pred C-CEEEEecCCEEEEEECCCCceeEEE
Confidence 6 5899999999999999999887654
No 53
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.2e-36 Score=260.57 Aligned_cols=247 Identities=14% Similarity=0.167 Sum_probs=194.5
Q ss_pred eecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCC---CC---eEEEeeCccCcEEEEEecCCCcEEEEeeCCCcEE
Q 024372 13 HGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGET---GD---WIGTFEGHKGAVWSCCLDANALFSASGSADFTAK 86 (268)
Q Consensus 13 ~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~---~~---~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~ 86 (268)
.+|+++|++++|+| .+|.+|++|+.|++|++||..+ +. ....+ +|.+.|.+++|+|++.++++++.|++|+
T Consensus 60 ~~h~~~V~~~~~s~--~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~dg~i~ 136 (437)
T 3gre_A 60 ENEPNSITSSAVSP--GETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFDAFAVSSKDGQII 136 (437)
T ss_dssp TTTTSCEEEEEEEC--SSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred cCCCCceEEEEECC--CCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCCCEEEEEeCCCEEE
Confidence 68999999999994 1788999999999999999876 43 23333 4999999999999999999999999999
Q ss_pred EEeCC---CCCeeeeec-------------cCCeEEEEE--ECCCCCEEEEeeCCCeEEEEECCCCCCCCeEecC--Ccc
Q 024372 87 LWDAL---TGDEKHSFE-------------HKHIVRACA--FSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGN--SSG 146 (268)
Q Consensus 87 iw~~~---~~~~~~~~~-------------~~~~v~~v~--~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~--~~~ 146 (268)
+||+. +++...... +...+.++. ++++++.+++|+.|+.|++||+++++.. ..+.. |.+
T Consensus 137 vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~-~~~~~~~h~~ 215 (437)
T 3gre_A 137 VLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERL-QIIENSPRHG 215 (437)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEE-EEEECCGGGC
T ss_pred EEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeee-EEEccCCCCC
Confidence 99994 444433221 344566666 5678999999999999999999876543 33333 778
Q ss_pred cEEEEEEeCCCCcEEEEeeCCCeEEEEeCCCCceEEeec--CCCCEEEEEEC----CCCcEEEEe-CCCeEEEEeCCCce
Q 024372 147 SIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLE--TKSPVTSAEVS----RDGRYITTA-DGSSVKFWDANHFG 219 (268)
Q Consensus 147 ~v~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~--~~~~v~~~~~s----~~g~~l~~~-~~~~v~~wd~~~~~ 219 (268)
.+.+++|+|++. ++++++.||.|++||+++++++..+. ++.++.+++++ |++++++++ .|+.|++||+++.+
T Consensus 216 ~v~~~~~s~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~ 294 (437)
T 3gre_A 216 AVSSICIDEECC-VLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGH 294 (437)
T ss_dssp CEEEEEECTTSC-EEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTE
T ss_pred ceEEEEECCCCC-EEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCc
Confidence 999999988754 56677788999999999999998774 45679999665 467787765 67899999999988
Q ss_pred eeeEEeCCC---------------------------CceeeEEcCCCCCEEEeccCCCeEEEEECCCCcEEeec
Q 024372 220 LVKGYNMPC---------------------------NTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIAIT 266 (268)
Q Consensus 220 ~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~gs~d~~i~~wd~~~g~~~~~~ 266 (268)
++..+..+. .+..+++. ++++|++|+.|+.|++||+.+++.+..+
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~--~~~~l~s~~~d~~i~~wd~~~~~~~~~~ 366 (437)
T 3gre_A 295 CQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS--NDKILLTDEATSSIVMFSLNELSSSKAV 366 (437)
T ss_dssp EEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE--TTEEEEEEGGGTEEEEEETTCGGGCEEE
T ss_pred EEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC--CceEEEecCCCCeEEEEECCCcccceEE
Confidence 887776331 12334454 4689999999999999999988866543
No 54
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.7e-37 Score=272.23 Aligned_cols=245 Identities=14% Similarity=0.116 Sum_probs=188.0
Q ss_pred eecCCCeeeEEEecCCCC------CcEEEE-------------------EeCCCCeEEeeCCCCCe----EEEeeCccCc
Q 024372 13 HGHSRPVVDLFYSPITPD------GFFLVS-------------------ASKDSSPMLRNGETGDW----IGTFEGHKGA 63 (268)
Q Consensus 13 ~~h~~~v~~~~f~~~~~d------g~~l~s-------------------~s~d~~i~iw~~~~~~~----~~~~~~h~~~ 63 (268)
..+.++|.+++|+|..++ +++||+ ++.|++|+||+..+++. ..++.+|.+.
T Consensus 130 ~~~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~ 209 (524)
T 2j04_B 130 YNVGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGE 209 (524)
T ss_dssp EECCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCCS
T ss_pred EECCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCc
Confidence 346788999999885311 156655 55788999999988764 2456778899
Q ss_pred EEEEEecCC------CcEEEEeeCCCcEEEEeCCCCCee-----------eee-ccCCeEEEEEECCCCCEEEEeeCCCe
Q 024372 64 VWSCCLDAN------ALFSASGSADFTAKLWDALTGDEK-----------HSF-EHKHIVRACAFSEDTHLLLTGGFEKI 125 (268)
Q Consensus 64 V~~~~~~~~------~~~l~s~s~D~~v~iw~~~~~~~~-----------~~~-~~~~~v~~v~~~~~~~~l~s~~~d~~ 125 (268)
|..++|+|+ +.+||+++.|++|++||+..+... ..+ .|...|.+++|++++ .|++|+.|++
T Consensus 210 V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~lasgs~Dgt 288 (524)
T 2j04_B 210 VWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVVCGFKNGF 288 (524)
T ss_dssp EEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EEEEEETTSE
T ss_pred EEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-eEEEEeCCCE
Confidence 999999986 579999999999999999766421 122 377889999999864 8999999999
Q ss_pred EEEEECCCCCCCCeEecCCcccEEEEE--EeCCCCcEEEEeeCCCeEEEEeCCCCceEEeecCC---CCEEEEEECCCCc
Q 024372 126 LRIFDLNRPDAPPREVGNSSGSIRTVA--WLHSDQTILSSCTDSGGVRLWDARSGKIVQTLETK---SPVTSAEVSRDGR 200 (268)
Q Consensus 126 i~~~d~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~---~~v~~~~~s~~g~ 200 (268)
|++||++++.........|.+.|.+++ |.+++..++++++.|++|+|||+++++++.++..+ ..+.+++|+|++.
T Consensus 289 V~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~ 368 (524)
T 2j04_B 289 VAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIY 368 (524)
T ss_dssp EEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTT
T ss_pred EEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcC
Confidence 999999866545555667889999994 44433378888999999999999998876555432 2478899999998
Q ss_pred EEEE-eCCCeEEEEeCCCceeeeEEeCCC-CceeeEEcCCCCCEEEeccCCCeEEEEECCC
Q 024372 201 YITT-ADGSSVKFWDANHFGLVKGYNMPC-NTESASLEPKLGNIFIAGGEDMWVHVFDFHT 259 (268)
Q Consensus 201 ~l~~-~~~~~v~~wd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~gs~d~~i~~wd~~~ 259 (268)
.+++ +.|++|++||++...++.++..+. .+.+++++| ++.+|++||.|+.|++||+..
T Consensus 369 ~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp-~g~~l~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 369 SYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSR-LHPMVLAGSADGSLIITNAAR 428 (524)
T ss_dssp EEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCS-SCCBCEEEETTTEEECCBSCS
T ss_pred eEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCC-CCCeEEEEECCCEEEEEechH
Confidence 7765 467899999999887766665544 456777776 699999999999999999753
No 55
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=7.2e-36 Score=257.95 Aligned_cols=246 Identities=15% Similarity=0.194 Sum_probs=195.6
Q ss_pred cEEeeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCCCcEEEE
Q 024372 9 PLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLW 88 (268)
Q Consensus 9 ~~~~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw 88 (268)
...+.+|.++|++++|+| +|++|++|+.|++|++||+.+++.+..+.+|.+.|.+++|+|++.++++++.|++|++|
T Consensus 132 ~~~~~~h~~~v~~~~~~~---~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iw 208 (420)
T 3vl1_A 132 REIDQAHVSEITKLKFFP---SGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLW 208 (420)
T ss_dssp EEETTSSSSCEEEEEECT---TSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEE
T ss_pred eeecccccCccEEEEECC---CCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEe
Confidence 334468999999999985 88999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCeeeeec----cCCeE---------------------EEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEecC
Q 024372 89 DALTGDEKHSFE----HKHIV---------------------RACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGN 143 (268)
Q Consensus 89 ~~~~~~~~~~~~----~~~~v---------------------~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~ 143 (268)
|+.+++....+. +...+ .+++|+|+++++++|+.|+.|++||++.+.........
T Consensus 209 d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 288 (420)
T 3vl1_A 209 ECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSK 288 (420)
T ss_dssp ETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCT
T ss_pred ECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccc
Confidence 999988877764 23334 44556889999999999999999999876544444455
Q ss_pred CcccEEEEEEeCCCCcEEEEeeCCCeEEEEeCCCCce-EEeec--CCCCEEEEEECCCCcEEEE-eCCCeEEEEeCCCce
Q 024372 144 SSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKI-VQTLE--TKSPVTSAEVSRDGRYITT-ADGSSVKFWDANHFG 219 (268)
Q Consensus 144 ~~~~v~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~-~~~~~--~~~~v~~~~~s~~g~~l~~-~~~~~v~~wd~~~~~ 219 (268)
|...+.+++|+|++..++++++.||.|++||+++++. +..+. +...+.++.+ |+++++++ +.|+.|++||+....
T Consensus 289 ~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~~ 367 (420)
T 3vl1_A 289 FTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYF-AAGALFVSSGFDTSIKLDIISDPE 367 (420)
T ss_dssp TSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEECCTT
T ss_pred cCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEe-CCCCEEEEecCCccEEEEeccCCC
Confidence 7789999999998886777888889999999998754 55554 3455777755 56666665 568999999987631
Q ss_pred ee---------eEE-eCCCCceeeEEcCCCCC---EEEeccCCCeEEEEECCC
Q 024372 220 LV---------KGY-NMPCNTESASLEPKLGN---IFIAGGEDMWVHVFDFHT 259 (268)
Q Consensus 220 ~~---------~~~-~~~~~~~~~~~~~~~~~---~~~~gs~d~~i~~wd~~~ 259 (268)
.. ..+ ........+++.+ +++ .+++++.++.+.+|++.+
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 368 SERPAIEFETPTFLVSNDDAVSQFCYVS-DDESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp CCSCEECTTSCEEECCSSCCCCEEEEEC-CSSSSCEEEEEETTTEEEEEESCC
T ss_pred CCccceeccCccEEccCCcceEEEEEcc-CCCCcceEEEEcCCceEEEEeccC
Confidence 11 111 2233456677777 566 677777889999999863
No 56
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=2.9e-34 Score=239.99 Aligned_cols=237 Identities=15% Similarity=0.197 Sum_probs=205.0
Q ss_pred ecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCC--eEEEeeCccCcEEEEEecCCCcEEEEeeCCCcEEEEeCC
Q 024372 14 GHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGD--WIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDAL 91 (268)
Q Consensus 14 ~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~--~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw~~~ 91 (268)
+|..+|.+++|+| +|++|++++.|+++++|+..+++ ....+.+|...|.+++|+|++.++++++.|+.|++||+.
T Consensus 95 ~~~~~v~~~~~~~---~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~ 171 (337)
T 1gxr_A 95 NRDNYIRSCKLLP---DGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLH 171 (337)
T ss_dssp CTTSBEEEEEECT---TSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred CCCCcEEEEEEcC---CCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCC
Confidence 7999999999985 89999999999999999999887 677888999999999999999999999999999999999
Q ss_pred CCCeeeeec-cCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEeeCCCeE
Q 024372 92 TGDEKHSFE-HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGV 170 (268)
Q Consensus 92 ~~~~~~~~~-~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i 170 (268)
+++....+. |...+.+++|+|+++.+++++.|+.|++||++.++.. ... .+...+.+++|+|++.. +++++.++.|
T Consensus 172 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~-~~~-~~~~~v~~~~~s~~~~~-l~~~~~~~~i 248 (337)
T 1gxr_A 172 NQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQL-QQH-DFTSQIFSLGYCPTGEW-LAVGMESSNV 248 (337)
T ss_dssp TTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE-EEE-ECSSCEEEEEECTTSSE-EEEEETTSCE
T ss_pred CCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceE-eee-cCCCceEEEEECCCCCE-EEEEcCCCcE
Confidence 988877775 7889999999999999999999999999999765422 222 35678999999988765 5556677999
Q ss_pred EEEeCCCCceEEeecCCCCEEEEEECCCCcEEEE-eCCCeEEEEeCCCceeeeEEeCCCCceeeEEcCCCCCEEEeccCC
Q 024372 171 RLWDARSGKIVQTLETKSPVTSAEVSRDGRYITT-ADGSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGGED 249 (268)
Q Consensus 171 ~iwd~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~-~~~~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~d 249 (268)
++||+++++......+..++.+++|+|+++++++ +.++.|++||++..+.+...........+.+.+ ++++|++++.|
T Consensus 249 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d 327 (337)
T 1gxr_A 249 EVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISV-DDKYIVTGSGD 327 (337)
T ss_dssp EEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECT-TSCEEEEEETT
T ss_pred EEEECCCCCeEEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEEecCCCcEEEEEECC-CCCEEEEecCC
Confidence 9999999887766666778999999999998776 468999999999988776666666677777877 69999999999
Q ss_pred CeEEEEEC
Q 024372 250 MWVHVFDF 257 (268)
Q Consensus 250 ~~i~~wd~ 257 (268)
+.|++||+
T Consensus 328 g~i~iw~~ 335 (337)
T 1gxr_A 328 KKATVYEV 335 (337)
T ss_dssp SCEEEEEE
T ss_pred CeEEEEEE
Confidence 99999996
No 57
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=2.1e-34 Score=252.31 Aligned_cols=246 Identities=18% Similarity=0.300 Sum_probs=204.3
Q ss_pred ecEEeeecCCCe-eeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCCCcEE
Q 024372 8 VPLVCHGHSRPV-VDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAK 86 (268)
Q Consensus 8 ~~~~~~~h~~~v-~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~ 86 (268)
....+.+|...| .++.|+ +++|++|+.|++|++||..+++.+.++.+|.+.|.+++|++++ ++++|+.|++|+
T Consensus 113 ~~~~l~~h~~~v~~~~~~~-----~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~ 186 (464)
T 3v7d_B 113 QRTTLRGHMTSVITCLQFE-----DNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVR 186 (464)
T ss_dssp EEEEEECCSSSCEEEEEEE-----TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEE
T ss_pred ceEEEcCCCCCcEEEEEEC-----CCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEE
Confidence 445678999885 566663 5699999999999999999999999999999999999999988 889999999999
Q ss_pred EEeCCCCCeeeeec-cCCeEEEEEEC--CCCCEEEEeeCCCeEEEEECCCCCCC----------------------CeEe
Q 024372 87 LWDALTGDEKHSFE-HKHIVRACAFS--EDTHLLLTGGFEKILRIFDLNRPDAP----------------------PREV 141 (268)
Q Consensus 87 iw~~~~~~~~~~~~-~~~~v~~v~~~--~~~~~l~s~~~d~~i~~~d~~~~~~~----------------------~~~~ 141 (268)
+||+.++.....+. |...|.+++|+ ++++.+++|+.|+.|++||++..... ....
T Consensus 187 vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (464)
T 3v7d_B 187 VWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVL 266 (464)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEE
T ss_pred EEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEc
Confidence 99999998888776 88899999998 57789999999999999999765432 1234
Q ss_pred cCCcccEEEEEEeCCCCcEEEEeeCCCeEEEEeCCCCceEEeecC-CCCEEEEEECCCCcEEEE-eCCCeEEEEeCCCce
Q 024372 142 GNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLET-KSPVTSAEVSRDGRYITT-ADGSSVKFWDANHFG 219 (268)
Q Consensus 142 ~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~-~~~v~~~~~s~~g~~l~~-~~~~~v~~wd~~~~~ 219 (268)
..|...+.++. +++ .++++++.|+.|++||+++++++..+.. ...+.+++++|+++++++ +.|+.|++||+++.+
T Consensus 267 ~~~~~~v~~~~--~~~-~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~ 343 (464)
T 3v7d_B 267 RGHMASVRTVS--GHG-NIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGE 343 (464)
T ss_dssp CCCSSCEEEEE--EET-TEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTE
T ss_pred cCccceEEEEc--CCC-CEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCc
Confidence 45667777764 333 4666777889999999999999998874 467999999999988775 578999999999999
Q ss_pred eeeEEeCCCCce-eeEEcCCCCCEEEeccCCCeEEEEECCCCcEEee
Q 024372 220 LVKGYNMPCNTE-SASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIAI 265 (268)
Q Consensus 220 ~~~~~~~~~~~~-~~~~~~~~~~~~~~gs~d~~i~~wd~~~g~~~~~ 265 (268)
++..+..+.... .+.+ ++.+|++|+.|+.|++||+.+++....
T Consensus 344 ~~~~~~~h~~~v~~~~~---~~~~l~s~s~dg~v~vwd~~~~~~~~~ 387 (464)
T 3v7d_B 344 LMYTLQGHTALVGLLRL---SDKFLVSAAADGSIRGWDANDYSRKFS 387 (464)
T ss_dssp EEEEECCCSSCEEEEEE---CSSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred EEEEEeCCCCcEEEEEE---cCCEEEEEeCCCcEEEEECCCCceeee
Confidence 888887655543 3443 268999999999999999988776543
No 58
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=4.2e-36 Score=254.00 Aligned_cols=241 Identities=15% Similarity=0.179 Sum_probs=198.3
Q ss_pred cCCCeeeEEEecCC-CCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecC-CCcEEEEeeCCCcEEEEeCCC
Q 024372 15 HSRPVVDLFYSPIT-PDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDA-NALFSASGSADFTAKLWDALT 92 (268)
Q Consensus 15 h~~~v~~~~f~~~~-~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~-~~~~l~s~s~D~~v~iw~~~~ 92 (268)
|.+.|.+++|+|.. ++|.+|++|+.|++|++||..+++.+..+.+|...|.+++|+| ++.++++++.|+.|++||+.+
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 147 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQT 147 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTT
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeec
Confidence 77889999999842 2278999999999999999999999999999999999999999 899999999999999999999
Q ss_pred CCeeeee----ccCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCC---------------------------eEe
Q 024372 93 GDEKHSF----EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPP---------------------------REV 141 (268)
Q Consensus 93 ~~~~~~~----~~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~---------------------------~~~ 141 (268)
++....+ .|...|.+++|+|+++.|++++.|+.|++||++.++... ...
T Consensus 148 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (366)
T 3k26_A 148 DTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTR 227 (366)
T ss_dssp TEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEEC
T ss_pred CeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccc
Confidence 9888876 588899999999999999999999999999987532110 111
Q ss_pred cCCcccEEEEEEeCCCCcEEEEeeCCCeEEEEeCCCCce--------------EEeec-CCCCEEEEEECCC--CcEEEE
Q 024372 142 GNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKI--------------VQTLE-TKSPVTSAEVSRD--GRYITT 204 (268)
Q Consensus 142 ~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~--------------~~~~~-~~~~v~~~~~s~~--g~~l~~ 204 (268)
..|.+.+.+++|+ + .++++++.|+.|++||+++++. +..+. +...+.+++|+|+ +++|++
T Consensus 228 ~~~~~~v~~~~~~--~-~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~ 304 (366)
T 3k26_A 228 DIHRNYVDCVRWL--G-DLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLAL 304 (366)
T ss_dssp SSCSSCCCEEEEE--T-TEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEE
T ss_pred cCCcceEEEEEEc--C-CEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEE
Confidence 1277889999998 3 3677777889999999988754 55554 3456889999999 999886
Q ss_pred e-CCCeEEEEeCCCceee----eEEeCC---CCceeeEEcCCCCCEEEeccCCCeEEEEECCC
Q 024372 205 A-DGSSVKFWDANHFGLV----KGYNMP---CNTESASLEPKLGNIFIAGGEDMWVHVFDFHT 259 (268)
Q Consensus 205 ~-~~~~v~~wd~~~~~~~----~~~~~~---~~~~~~~~~~~~~~~~~~gs~d~~i~~wd~~~ 259 (268)
+ .|+.|++||++..+.. ..+..+ ..+..+++++ ++++|++|+.|+.|++||+.+
T Consensus 305 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 305 GNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSR-DSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp ECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECT-TSSEEEEEETTSEEEEEEC--
T ss_pred EecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCC-CCCeEEEEeCCCEEEEEEecC
Confidence 5 6899999999886533 345443 4456677777 699999999999999999853
No 59
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-34 Score=249.15 Aligned_cols=250 Identities=16% Similarity=0.244 Sum_probs=202.5
Q ss_pred eeecEEeeecCCCeeeEEEecCCCCCc-EEEEEeCCCCeEEeeC----CCCC------eEEEeeC----------ccCcE
Q 024372 6 VAVPLVCHGHSRPVVDLFYSPITPDGF-FLVSASKDSSPMLRNG----ETGD------WIGTFEG----------HKGAV 64 (268)
Q Consensus 6 ~~~~~~~~~h~~~v~~~~f~~~~~dg~-~l~s~s~d~~i~iw~~----~~~~------~~~~~~~----------h~~~V 64 (268)
..+.+..+.|.++|++++|+| +|. +||+|+.|+.+++|+. .+++ ....+.. |.+.|
T Consensus 35 ~~~~~~~~~~~~~v~~~~~s~---~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 111 (425)
T 1r5m_A 35 FVKILKEIVKLDNIVSSTWNP---LDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQV 111 (425)
T ss_dssp CCEECEEEEECSCCSEEEECS---SCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCE
T ss_pred hhhheeeeeccCceEEEEECC---CCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCce
Confidence 344444567889999999995 888 9999999999999999 8888 4555654 78899
Q ss_pred EEEEecCCCcEEEEeeCCCcEEEEeCCCCCeeeeec-cCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCC-------
Q 024372 65 WSCCLDANALFSASGSADFTAKLWDALTGDEKHSFE-HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDA------- 136 (268)
Q Consensus 65 ~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~-~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~------- 136 (268)
.+++|+|++.+|++++.|+.|++|| .++.....+. |...|.+++|+|+++.|++++.|+.+++||+.++..
T Consensus 112 ~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 190 (425)
T 1r5m_A 112 TCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELK 190 (425)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC
T ss_pred EEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeecc
Confidence 9999999999999999999999999 5555555554 888999999999999999999999999999864321
Q ss_pred ------------------------------------------------CCeEecCCcccEEEEEEeCCCCcEEEEeeCCC
Q 024372 137 ------------------------------------------------PPREVGNSSGSIRTVAWLHSDQTILSSCTDSG 168 (268)
Q Consensus 137 ------------------------------------------------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~ 168 (268)
.......|...+.+++|+|++. ++++++.|+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~ 269 (425)
T 1r5m_A 191 ETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNK-LLLSASDDG 269 (425)
T ss_dssp ---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTT-EEEEEETTS
T ss_pred ccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCC-EEEEEcCCC
Confidence 1112334667899999998776 555667789
Q ss_pred eEEEEeCCCCceEEeec-CCCCEEEEEECCCCcEEEEeCCCeEEEEeCCCceeeeEEeCCC-CceeeEEcCCCCCEEEec
Q 024372 169 GVRLWDARSGKIVQTLE-TKSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGYNMPC-NTESASLEPKLGNIFIAG 246 (268)
Q Consensus 169 ~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~~g~~l~~~~~~~v~~wd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g 246 (268)
.|++||+++++.+..+. +...+.+++|+|++.+++++.++.|++||+++.+.+..+..+. .+..+.+++ ++++|++|
T Consensus 270 ~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~ 348 (425)
T 1r5m_A 270 TLRIWHGGNGNSQNCFYGHSQSIVSASWVGDDKVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQ-DGQKYAVA 348 (425)
T ss_dssp CEEEECSSSBSCSEEECCCSSCEEEEEEETTTEEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECT-TSSEEEEE
T ss_pred EEEEEECCCCccceEecCCCccEEEEEECCCCEEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcC-CCCEEEEE
Confidence 99999999999888886 4567999999999944556789999999999998888887644 455667776 69999999
Q ss_pred cCCCeEEEEECCCCc
Q 024372 247 GEDMWVHVFDFHTGE 261 (268)
Q Consensus 247 s~d~~i~~wd~~~g~ 261 (268)
+.|+.|++||+.+++
T Consensus 349 ~~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 349 FMDGQVNVYDLKKLN 363 (425)
T ss_dssp ETTSCEEEEECHHHH
T ss_pred ECCCeEEEEECCCCc
Confidence 999999999998887
No 60
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=2.4e-35 Score=252.68 Aligned_cols=247 Identities=16% Similarity=0.164 Sum_probs=204.9
Q ss_pred ecEEeeecCCCeeeEEEecCCCC----C---cEEEEEeCCCCeEEeeCCCCCe-----EEEeeCc-----cCcEEEEEec
Q 024372 8 VPLVCHGHSRPVVDLFYSPITPD----G---FFLVSASKDSSPMLRNGETGDW-----IGTFEGH-----KGAVWSCCLD 70 (268)
Q Consensus 8 ~~~~~~~h~~~v~~~~f~~~~~d----g---~~l~s~s~d~~i~iw~~~~~~~-----~~~~~~h-----~~~V~~~~~~ 70 (268)
....+.+|..+|.+++|+| + | .+|++++.|++|++|+..+++. +..+.+| ...|.+++|+
T Consensus 54 ~~~~~~~h~~~v~~~~~~~---~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 130 (397)
T 1sq9_A 54 KSYSHFVHKSGLHHVDVLQ---AIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWG 130 (397)
T ss_dssp GEEEEECCTTCEEEEEEEE---EEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEE
T ss_pred cceEEecCCCcEEEEEEec---ccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEe
Confidence 4556679999999999996 6 8 9999999999999999999887 8889999 5999999999
Q ss_pred ----CCCcE-EEEeeCCCcEEEEeCCC------CCeee-----ee--------ccCCeEEEEEECCCCCEEEEeeCCCeE
Q 024372 71 ----ANALF-SASGSADFTAKLWDALT------GDEKH-----SF--------EHKHIVRACAFSEDTHLLLTGGFEKIL 126 (268)
Q Consensus 71 ----~~~~~-l~s~s~D~~v~iw~~~~------~~~~~-----~~--------~~~~~v~~v~~~~~~~~l~s~~~d~~i 126 (268)
|++.+ +++++.|+.|++||+.+ +.... .+ .|...|.+++|+|++ .+++++.|+.|
T Consensus 131 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i 209 (397)
T 1sq9_A 131 ASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTV 209 (397)
T ss_dssp CCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEE
T ss_pred eccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcE
Confidence 99999 99999999999999987 55443 44 257789999999999 99999999999
Q ss_pred EEEECCCCCCCCeEecC---C---cccEEEEEEeCCCCcEEEEeeCC---CeEEEEeCCCCceEEeec------------
Q 024372 127 RIFDLNRPDAPPREVGN---S---SGSIRTVAWLHSDQTILSSCTDS---GGVRLWDARSGKIVQTLE------------ 185 (268)
Q Consensus 127 ~~~d~~~~~~~~~~~~~---~---~~~v~~~~~~~~~~~~~~~~~~d---~~i~iwd~~~~~~~~~~~------------ 185 (268)
++||++.... ...+.. | ...+.+++|+|++. ++++++.| +.|++||+++++.+..+.
T Consensus 210 ~i~d~~~~~~-~~~~~~~~~h~~~~~~i~~i~~~~~~~-~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~ 287 (397)
T 1sq9_A 210 QISELSTLRP-LYNFESQHSMINNSNSIRSVKFSPQGS-LLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGE 287 (397)
T ss_dssp EEEETTTTEE-EEEEECCC---CCCCCEEEEEECSSTT-EEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CC
T ss_pred EEEECCCCce-eEEEeccccccccCCccceEEECCCCC-EEEEEecCCCCceEEEEECCCCcccceeccCcccccccccc
Confidence 9999976542 344445 6 78999999998765 55566777 899999999999988886
Q ss_pred --CCCCEEEEEECCCCcEEEEe-CCCeEEEEeCCCceeeeEEe------C----------------CCCceeeEEcCCCC
Q 024372 186 --TKSPVTSAEVSRDGRYITTA-DGSSVKFWDANHFGLVKGYN------M----------------PCNTESASLEPKLG 240 (268)
Q Consensus 186 --~~~~v~~~~~s~~g~~l~~~-~~~~v~~wd~~~~~~~~~~~------~----------------~~~~~~~~~~~~~~ 240 (268)
+...+.+++|+|++++|+++ .|+.|++||++..+++..+. . ...+..+.+.+ ++
T Consensus 288 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~-~g 366 (397)
T 1sq9_A 288 FAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLK-KG 366 (397)
T ss_dssp BSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEEC-TT
T ss_pred cccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEecc-cc
Confidence 45679999999999988764 68999999999999888887 4 33456777777 45
Q ss_pred ----------CEEEeccCCCeEEEEECCCCc
Q 024372 241 ----------NIFIAGGEDMWVHVFDFHTGE 261 (268)
Q Consensus 241 ----------~~~~~gs~d~~i~~wd~~~g~ 261 (268)
++|++|+.|+.|++||+++|+
T Consensus 367 ~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 367 WRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp TSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred ccccccccccceEEEecCCCcEEEEEcCCCC
Confidence 799999999999999998874
No 61
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=5.4e-35 Score=246.53 Aligned_cols=245 Identities=18% Similarity=0.247 Sum_probs=195.6
Q ss_pred eeecCCCeeeEEEecCCCCC-cEEEEEeC---CCCeEEeeCCCCCeEEEe-eCccCcEEEEEecCC---CcEEEEeeCCC
Q 024372 12 CHGHSRPVVDLFYSPITPDG-FFLVSASK---DSSPMLRNGETGDWIGTF-EGHKGAVWSCCLDAN---ALFSASGSADF 83 (268)
Q Consensus 12 ~~~h~~~v~~~~f~~~~~dg-~~l~s~s~---d~~i~iw~~~~~~~~~~~-~~h~~~V~~~~~~~~---~~~l~s~s~D~ 83 (268)
+.+|.++|.+++|+| +| .++++|+. |+++++|+..+++..... .+|..+|.+++|+|+ +.++++|+.|+
T Consensus 14 ~~~h~~~v~~~~~~p---~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg 90 (357)
T 3i2n_A 14 QKGFNYTVFDCKWVP---CSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGG 90 (357)
T ss_dssp EEECSSCEEEEEECT---TSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTS
T ss_pred ccCCCCceEEEEEcC---CCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCC
Confidence 358999999999996 66 45566766 999999999999876444 379999999999998 68999999999
Q ss_pred cEEEEeCCCCC-eeeee-ccCCeEEEEE------ECCCCCEEEEeeCCCeEEEEECCCCCCCCeEecCCcc----cEEEE
Q 024372 84 TAKLWDALTGD-EKHSF-EHKHIVRACA------FSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSG----SIRTV 151 (268)
Q Consensus 84 ~v~iw~~~~~~-~~~~~-~~~~~v~~v~------~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~----~v~~~ 151 (268)
.|++||+.++. ....+ .|...|.++. |+|+++.|++++.|+.|++||++.+.........+.+ .+.++
T Consensus 91 ~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~ 170 (357)
T 3i2n_A 91 NLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTV 170 (357)
T ss_dssp CEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEE
T ss_pred eEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEE
Confidence 99999999887 55555 4888999995 5789999999999999999999876544555543333 78888
Q ss_pred EE----eCCCCcEEEEeeCCCeEEEEeCCCCceEEeecCCCCEEEEEECC---CCcEEEE-eCCCeEEEEeCCCceeeeE
Q 024372 152 AW----LHSDQTILSSCTDSGGVRLWDARSGKIVQTLETKSPVTSAEVSR---DGRYITT-ADGSSVKFWDANHFGLVKG 223 (268)
Q Consensus 152 ~~----~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~---~g~~l~~-~~~~~v~~wd~~~~~~~~~ 223 (268)
+| +++ +.++++++.|+.|++||+++++......+...+.+++|+| ++.++++ +.++.|++||++..+.+..
T Consensus 171 ~~~~~~~~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 249 (357)
T 3i2n_A 171 AFGNAYNQE-ERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKG 249 (357)
T ss_dssp EEECCCC-C-CCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTE
T ss_pred EEEeccCCC-CCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccc
Confidence 84 454 4566777888999999999999887777788899999999 8887765 5789999999987665544
Q ss_pred Ee-----C-CCCceeeEEcCCCCC-EEEeccCCCeEEEEECCCCc
Q 024372 224 YN-----M-PCNTESASLEPKLGN-IFIAGGEDMWVHVFDFHTGE 261 (268)
Q Consensus 224 ~~-----~-~~~~~~~~~~~~~~~-~~~~gs~d~~i~~wd~~~g~ 261 (268)
+. . ...+..+.++| +++ +|++|+.|+.|++||+.+++
T Consensus 250 ~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~ 293 (357)
T 3i2n_A 250 FASVSEKAHKSTVWQVRHLP-QNRELFLTAGGAGGLHLWKYEYPI 293 (357)
T ss_dssp EEEEEEECCSSCEEEEEEET-TEEEEEEEEETTSEEEEEEEECCS
T ss_pred eeeeccCCCcCCEEEEEECC-CCCcEEEEEeCCCcEEEeecCCCc
Confidence 43 3 33456677777 466 89999999999999997653
No 62
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-34 Score=244.94 Aligned_cols=250 Identities=13% Similarity=0.176 Sum_probs=211.0
Q ss_pred eecEEeeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCC----
Q 024372 7 AVPLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSAD---- 82 (268)
Q Consensus 7 ~~~~~~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D---- 82 (268)
.....+.+|..+|.+++|+| ++++|++++.|++|++||..+++.+..+. |...|.+++|+|++.++++++.+
T Consensus 65 ~~~~~~~~h~~~v~~~~~~~---~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~ 140 (369)
T 3zwl_B 65 ERLGTLDGHTGTIWSIDVDC---FTKYCVTGSADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKN 140 (369)
T ss_dssp CEEEEECCCSSCEEEEEECT---TSSEEEEEETTTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTB
T ss_pred hhhhhhhhcCCcEEEEEEcC---CCCEEEEEeCCCeEEEEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCC
Confidence 34455678999999999985 89999999999999999999999999888 88999999999999999999998
Q ss_pred -CcEEEEeCCCCCeee------------eeccCC--eEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEecCCccc
Q 024372 83 -FTAKLWDALTGDEKH------------SFEHKH--IVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGS 147 (268)
Q Consensus 83 -~~v~iw~~~~~~~~~------------~~~~~~--~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~ 147 (268)
+.|++||+....... ...+.. .+.+++|+|+++.+++++.|+.|++||++...........|...
T Consensus 141 ~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 220 (369)
T 3zwl_B 141 PGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKS 220 (369)
T ss_dssp CCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSC
T ss_pred CCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCc
Confidence 999999987654211 112333 89999999999999999999999999998643444556667889
Q ss_pred EEEEEEeCCCCcEEEEeeCCCeEEEEeCCCCceEEeecCCCCEEEEEECCCCcEEEEe-CCC--------------eEEE
Q 024372 148 IRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYITTA-DGS--------------SVKF 212 (268)
Q Consensus 148 v~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~-~~~--------------~v~~ 212 (268)
+.+++|+|++. ++++++.|+.|++||+++++.+..+.....+.+++++|++++++++ .++ .+++
T Consensus 221 v~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~ 299 (369)
T 3zwl_B 221 ISDMQFSPDLT-YFITSSRDTNSFLVDVSTLQVLKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARF 299 (369)
T ss_dssp EEEEEECTTSS-EEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECCC-------------CEEEE
T ss_pred eeEEEECCCCC-EEEEecCCceEEEEECCCCceeeeecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEE
Confidence 99999998765 4556677899999999999999999888889999999999998765 444 7999
Q ss_pred EeCCCceeeeEEeCCCC-ceeeEEcCCCCCEEEeccCCCeEEEEECCCCcE
Q 024372 213 WDANHFGLVKGYNMPCN-TESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQ 262 (268)
Q Consensus 213 wd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~gs~d~~i~~wd~~~g~~ 262 (268)
||+...+.+..+..+.. +..+.+++ ++++|++|+.|+.|++||+.++..
T Consensus 300 ~d~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~~~dg~v~iw~~~~~~~ 349 (369)
T 3zwl_B 300 YHKIFEEEIGRVQGHFGPLNTVAISP-QGTSYASGGEDGFIRLHHFEKSYF 349 (369)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEECT-TSSEEEEEETTSEEEEEEECHHHH
T ss_pred EecCCCcchhheecccCcEEEEEECC-CCCEEEEEcCCCeEEEEECccccc
Confidence 99999988888876544 45667776 799999999999999999986653
No 63
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=5.4e-35 Score=252.50 Aligned_cols=237 Identities=12% Similarity=0.135 Sum_probs=193.0
Q ss_pred CeeeE-EEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCCCcEEEEeCCCCCee
Q 024372 18 PVVDL-FYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEK 96 (268)
Q Consensus 18 ~v~~~-~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~ 96 (268)
.+..+ .|+ ++|++|++|+.|++|++||..+++.+..+.+|.+.|.+++|+|++.++++++.|++|++||+.++...
T Consensus 98 ~~~~~~~~~---~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~ 174 (420)
T 3vl1_A 98 DYTAVDTAK---LQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNP 174 (420)
T ss_dssp CEEEEEEEC---SSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCC
T ss_pred CceEEEEEe---cCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCc
Confidence 44444 555 58999999999999999999999999888999999999999999999999999999999999998887
Q ss_pred eeec-cCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEec---CCcccEEEEEE-------------------
Q 024372 97 HSFE-HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVG---NSSGSIRTVAW------------------- 153 (268)
Q Consensus 97 ~~~~-~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~---~~~~~v~~~~~------------------- 153 (268)
..+. |...|.+++|+|+++.|++++.|+.|++||+++++.. ..+. .+...+.++++
T Consensus 175 ~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~ 253 (420)
T 3vl1_A 175 RTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTI-HTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNL 253 (420)
T ss_dssp EEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEE-EEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTT
T ss_pred eEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCcee-EEeecCCCCCCCccEEEEecCCcceeeecccCcccce
Confidence 7765 8889999999999999999999999999999865432 2222 24455666665
Q ss_pred --eCCCCcEEEEeeCCCeEEEEeCCCCceEEeec--CCCCEEEEEECCCCc-EEEE-eCCCeEEEEeCCCcee-eeEEeC
Q 024372 154 --LHSDQTILSSCTDSGGVRLWDARSGKIVQTLE--TKSPVTSAEVSRDGR-YITT-ADGSSVKFWDANHFGL-VKGYNM 226 (268)
Q Consensus 154 --~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~--~~~~v~~~~~s~~g~-~l~~-~~~~~v~~wd~~~~~~-~~~~~~ 226 (268)
+|+ +.++++++.||.|++||+++++.+..+. +...+.+++|+|++. ++++ +.|+.|++||+++.+. +..+..
T Consensus 254 ~~s~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~ 332 (420)
T 3vl1_A 254 EFGTY-GKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLI 332 (420)
T ss_dssp CSSCT-TEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEE
T ss_pred EEcCC-CCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhc
Confidence 343 4567777888999999999998887765 346799999999998 6655 5789999999988643 566654
Q ss_pred -CCCceeeEEcCCCCCEEEeccCCCeEEEEECCCC
Q 024372 227 -PCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTG 260 (268)
Q Consensus 227 -~~~~~~~~~~~~~~~~~~~gs~d~~i~~wd~~~g 260 (268)
+.......+++ ++++|++|+.|+.|++||+...
T Consensus 333 ~~~~~v~~~~~~-~~~~l~s~~~d~~v~iw~~~~~ 366 (420)
T 3vl1_A 333 NEGTPINNVYFA-AGALFVSSGFDTSIKLDIISDP 366 (420)
T ss_dssp STTSCEEEEEEE-TTEEEEEETTTEEEEEEEECCT
T ss_pred cCCCCceEEEeC-CCCEEEEecCCccEEEEeccCC
Confidence 34444555555 5889999999999999998753
No 64
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.4e-36 Score=258.63 Aligned_cols=250 Identities=14% Similarity=0.155 Sum_probs=204.1
Q ss_pred ecEEeeecCCCeeeEEEecCCCC-CcEEEEEeCCCCeEEeeCCCCC------eE---EEeeCccCcEEEEEecCC-CcEE
Q 024372 8 VPLVCHGHSRPVVDLFYSPITPD-GFFLVSASKDSSPMLRNGETGD------WI---GTFEGHKGAVWSCCLDAN-ALFS 76 (268)
Q Consensus 8 ~~~~~~~h~~~v~~~~f~~~~~d-g~~l~s~s~d~~i~iw~~~~~~------~~---~~~~~h~~~V~~~~~~~~-~~~l 76 (268)
....+.+|..+|.+++|+| + +++|++++.|++|++||..+++ .. ..+.+|...|.+++|+|+ +.++
T Consensus 105 ~~~~~~~h~~~v~~~~~~~---~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 181 (416)
T 2pm9_A 105 SMARFSNHSSSVKTVKFNA---KQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVF 181 (416)
T ss_dssp EEEECCCSSSCCCEEEECS---SSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEE
T ss_pred chhhccCCccceEEEEEcC---CCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEE
Confidence 4445678999999999986 5 8899999999999999999886 33 334689999999999999 7899
Q ss_pred EEeeCCCcEEEEeCCCCCeeeeecc-------CCeEEEEEECCCC-CEEEEeeCCC---eEEEEECCCCCCCCeEec-CC
Q 024372 77 ASGSADFTAKLWDALTGDEKHSFEH-------KHIVRACAFSEDT-HLLLTGGFEK---ILRIFDLNRPDAPPREVG-NS 144 (268)
Q Consensus 77 ~s~s~D~~v~iw~~~~~~~~~~~~~-------~~~v~~v~~~~~~-~~l~s~~~d~---~i~~~d~~~~~~~~~~~~-~~ 144 (268)
++++.|+.|++||+.++.....+.. ...+.+++|+|++ .++++++.|+ .|++||++.......... .|
T Consensus 182 ~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~ 261 (416)
T 2pm9_A 182 ASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGH 261 (416)
T ss_dssp EEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCC
T ss_pred EEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCc
Confidence 9999999999999999888777753 6789999999986 6999999998 999999987644555555 67
Q ss_pred cccEEEEEEeCCCCcEEEEeeCCCeEEEEeCCCCceEEeecC-CCCEEEEEECCCC-cEEEE-eCCCeEEEEeCCCceee
Q 024372 145 SGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLET-KSPVTSAEVSRDG-RYITT-ADGSSVKFWDANHFGLV 221 (268)
Q Consensus 145 ~~~v~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~-~~~v~~~~~s~~g-~~l~~-~~~~~v~~wd~~~~~~~ 221 (268)
...+.+++|+|.++.++++++.|+.|++||+++++++..+.. ...+.+++|+|++ .++++ +.|+.|++||+......
T Consensus 262 ~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~ 341 (416)
T 2pm9_A 262 QKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNT 341 (416)
T ss_dssp SSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCS
T ss_pred cCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCC
Confidence 889999999985556677778889999999999999988865 4569999999998 77765 46899999999765432
Q ss_pred eEEe------------------------------------CCCCceeeEEcCCCCCEEEeccCCCeEEEEECCCCc
Q 024372 222 KGYN------------------------------------MPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGE 261 (268)
Q Consensus 222 ~~~~------------------------------------~~~~~~~~~~~~~~~~~~~~gs~d~~i~~wd~~~g~ 261 (268)
.... .......+++++ +|+++++|+.|+.|++|++.+++
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~la~~~~d~~v~~w~~~~~~ 416 (416)
T 2pm9_A 342 LDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAF-GGKLVQITPDGKGVSITNPKISG 416 (416)
T ss_dssp SCC----------------------CCSCCCSSCCCCCSTTCCCSCCCEEET-TTEEECBCTTSSCBCCBCCCCC-
T ss_pred cccccccccccCCcccccccccccccccccccccccCCccccCCccceEEee-CCeEEEEeCCCCeEEEEEeccCC
Confidence 1110 111223566777 69999999999999999998753
No 65
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=2.5e-35 Score=248.60 Aligned_cols=248 Identities=17% Similarity=0.198 Sum_probs=195.1
Q ss_pred eeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCC-eEEEeeCccCcEEEEE------ecCCCcEEEEeeCCCc
Q 024372 12 CHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGD-WIGTFEGHKGAVWSCC------LDANALFSASGSADFT 84 (268)
Q Consensus 12 ~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~-~~~~~~~h~~~V~~~~------~~~~~~~l~s~s~D~~ 84 (268)
..+|..+|.+++|+|..++|.+|++|+.|++|++|+..+++ .+..+.+|.+.|.+++ |+|++.++++++.|+.
T Consensus 61 ~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~ 140 (357)
T 3i2n_A 61 EIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGT 140 (357)
T ss_dssp EEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSC
T ss_pred eecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCe
Confidence 34899999999999854458999999999999999999988 8889999999999995 5788999999999999
Q ss_pred EEEEeCCCCC-eeeeec-c----CCeEEEEE----ECCCCCEEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEe
Q 024372 85 AKLWDALTGD-EKHSFE-H----KHIVRACA----FSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWL 154 (268)
Q Consensus 85 v~iw~~~~~~-~~~~~~-~----~~~v~~v~----~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~ 154 (268)
|++||+.++. ....+. + ...+.++. |+|+++++++++.|+.|++||++.+.. .....+...+.+++|+
T Consensus 141 i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~--~~~~~~~~~v~~~~~~ 218 (357)
T 3i2n_A 141 VKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMAL--RWETNIKNGVCSLEFD 218 (357)
T ss_dssp EEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEE--EEEEECSSCEEEEEES
T ss_pred EEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCce--eeecCCCCceEEEEcC
Confidence 9999998876 555553 2 33788888 788999999999999999999986543 3334567899999999
Q ss_pred C---CCCcEEEEeeCCCeEEEEeCCCCceEEee------cCCCCEEEEEECCCCc-EEEE-eCCCeEEEEeCCCc-----
Q 024372 155 H---SDQTILSSCTDSGGVRLWDARSGKIVQTL------ETKSPVTSAEVSRDGR-YITT-ADGSSVKFWDANHF----- 218 (268)
Q Consensus 155 ~---~~~~~~~~~~~d~~i~iwd~~~~~~~~~~------~~~~~v~~~~~s~~g~-~l~~-~~~~~v~~wd~~~~----- 218 (268)
| ++. ++++++.||.|++||+++++.+..+ .+...+.+++|+|+++ ++++ +.|+.|++||++..
T Consensus 219 ~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 297 (357)
T 3i2n_A 219 RKDISMN-KLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSK 297 (357)
T ss_dssp CSSSSCC-EEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--
T ss_pred CCCCCCC-EEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCccccc
Confidence 8 554 5556677899999999887654433 3556799999999998 5554 57899999998643
Q ss_pred --------------eeeeEEeCCC-CceeeEEcCCCCCEEE-eccCCCeEEEEECCCCcEE
Q 024372 219 --------------GLVKGYNMPC-NTESASLEPKLGNIFI-AGGEDMWVHVFDFHTGEQI 263 (268)
Q Consensus 219 --------------~~~~~~~~~~-~~~~~~~~~~~~~~~~-~gs~d~~i~~wd~~~g~~~ 263 (268)
..+..+..+. .+..+.+++ ++++|+ +|+.|+.|++||+.+.+.|
T Consensus 298 ~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~s~~~d~~i~iw~~~~~~~i 357 (357)
T 3i2n_A 298 KDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSP-DKRGLCVCSSFDQTVRVLIVTKLNKI 357 (357)
T ss_dssp CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECS-SSTTEEEEEETTSEEEEEEECC----
T ss_pred ccCCCCccccccccceeeccccCCCCeeEEEEcC-CCCeEEEEecCCCcEEEEECCCcccC
Confidence 3455555444 355677777 577777 8999999999999887654
No 66
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=1e-33 Score=235.24 Aligned_cols=250 Identities=15% Similarity=0.234 Sum_probs=209.2
Q ss_pred eeecEEeeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCCCcE
Q 024372 6 VAVPLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTA 85 (268)
Q Consensus 6 ~~~~~~~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v 85 (268)
+...+.+++|...|++++|+| +|++||+|+.|++|++|+.++++.+.++.+|...+.++++ ++.++++++.++.+
T Consensus 57 ~~~~~~~~~~~~~V~~v~~~~---~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~--~~~~l~s~~~~~~~ 131 (318)
T 4ggc_A 57 ILQLLQMEQPGEYISSVAWIK---EGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW--NSYILSSGSRSGHI 131 (318)
T ss_dssp EEEEEECCSTTCCEEEEEECT---TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE--ETTEEEEEETTSEE
T ss_pred EEEEEEecCCCCeEEEEEECC---CCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeec--CCCEEEEEecCCce
Confidence 344455568999999999985 8999999999999999999999999999999999877655 56789999999999
Q ss_pred EEEeCCCCCeee--eeccCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCC---CeEecCCcccEEEEEEeCCCCcE
Q 024372 86 KLWDALTGDEKH--SFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAP---PREVGNSSGSIRTVAWLHSDQTI 160 (268)
Q Consensus 86 ~iw~~~~~~~~~--~~~~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~ 160 (268)
++|+........ ...|...+..+.++++++.+++++.|+.|++||+++++.. ......+.+.+..+.+.+.+..+
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 211 (318)
T 4ggc_A 132 HHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNV 211 (318)
T ss_dssp EEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTE
T ss_pred EeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcE
Confidence 999987765432 3357889999999999999999999999999999765432 23445567889999999888776
Q ss_pred E--EEeeCCCeEEEEeCCCCceEEeecCCCCEEEEEECCCCcEEEE-e--CCCeEEEEeCCCceeeeEEeCCCC-ceeeE
Q 024372 161 L--SSCTDSGGVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYITT-A--DGSSVKFWDANHFGLVKGYNMPCN-TESAS 234 (268)
Q Consensus 161 ~--~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~-~--~~~~v~~wd~~~~~~~~~~~~~~~-~~~~~ 234 (268)
+ ++++.++.|++||.+.............+..+.++|++..+++ + .|+.|++||+++++++..+..+.. +..++
T Consensus 212 ~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~ 291 (318)
T 4ggc_A 212 LATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLT 291 (318)
T ss_dssp EEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEE
T ss_pred EEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEE
Confidence 4 4566778999999999998888888888999999999987654 2 578999999999999998886654 45667
Q ss_pred EcCCCCCEEEeccCCCeEEEEECCCCc
Q 024372 235 LEPKLGNIFIAGGEDMWVHVFDFHTGE 261 (268)
Q Consensus 235 ~~~~~~~~~~~gs~d~~i~~wd~~~g~ 261 (268)
++| ++++|++||.|+.|++||+...+
T Consensus 292 ~sp-dg~~l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 292 MSP-DGATVASAAADETLRLWRCFELD 317 (318)
T ss_dssp ECT-TSSCEEEEETTTEEEEECCSCCC
T ss_pred EcC-CCCEEEEEecCCeEEEEECCCCC
Confidence 776 69999999999999999997654
No 67
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=5.3e-35 Score=245.57 Aligned_cols=245 Identities=11% Similarity=0.011 Sum_probs=202.2
Q ss_pred eeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCC---eEEEeeCccCcEEEEEecCCCc-EEEEeeCCCcEEE
Q 024372 12 CHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGD---WIGTFEGHKGAVWSCCLDANAL-FSASGSADFTAKL 87 (268)
Q Consensus 12 ~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~---~~~~~~~h~~~V~~~~~~~~~~-~l~s~s~D~~v~i 87 (268)
..+|.+.|.+++|+| +|++|++++.|++|++|+..+++ ....+.+|...|.+++|+|++. ++++|+.|+.|++
T Consensus 7 ~~~h~~~v~~~~~s~---~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~ 83 (342)
T 1yfq_A 7 EQAPKDYISDIKIIP---SKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILK 83 (342)
T ss_dssp SSCCSSCEEEEEEEG---GGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEE
T ss_pred ccCCCCcEEEEEEcC---CCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEE
Confidence 358999999999996 88999999999999999998887 3445668999999999999999 9999999999999
Q ss_pred EeC-CCCCeeeeec--cCCeEEEEEECCCCCEEEEeeCCCeEEEEECCC---------CCCCCeEecCCcccEEEEEEeC
Q 024372 88 WDA-LTGDEKHSFE--HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNR---------PDAPPREVGNSSGSIRTVAWLH 155 (268)
Q Consensus 88 w~~-~~~~~~~~~~--~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~---------~~~~~~~~~~~~~~v~~~~~~~ 155 (268)
||+ .++....... |...|.+++|+| ++.+++++.|+.|++||++. .+.. .... +.+.+.+++|++
T Consensus 84 wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~-~~~~-~~~~v~~~~~~~ 160 (342)
T 1yfq_A 84 VDLIGSPSFQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNS-NNTK-VKNKIFTMDTNS 160 (342)
T ss_dssp ECSSSSSSEEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCS-SSSS-SCCCEEEEEECS
T ss_pred EEeccCCceEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCee-eEEe-eCCceEEEEecC
Confidence 999 8887765556 889999999999 99999999999999999875 3322 2222 678899999987
Q ss_pred CCCcEEEEeeCCCeEEEEeCCC-CceE---EeecCCCCEEEEEECC-CCcEEEE-eCCCeEEEEeCCCc------eeeeE
Q 024372 156 SDQTILSSCTDSGGVRLWDARS-GKIV---QTLETKSPVTSAEVSR-DGRYITT-ADGSSVKFWDANHF------GLVKG 223 (268)
Q Consensus 156 ~~~~~~~~~~~d~~i~iwd~~~-~~~~---~~~~~~~~v~~~~~s~-~g~~l~~-~~~~~v~~wd~~~~------~~~~~ 223 (268)
+. +++++.++.|++||+++ +... ....+...+.+++|+| +++++++ +.++.|++||++.. .....
T Consensus 161 ~~---l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~ 237 (342)
T 1yfq_A 161 SR---LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFA 237 (342)
T ss_dssp SE---EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEE
T ss_pred Cc---EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCccccccccee
Confidence 65 55667789999999998 5432 2334566799999999 9988765 57899999999776 55666
Q ss_pred EeCCC----------CceeeEEcCCCCCEEEeccCCCeEEEEECCCCcEEeec
Q 024372 224 YNMPC----------NTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIAIT 266 (268)
Q Consensus 224 ~~~~~----------~~~~~~~~~~~~~~~~~gs~d~~i~~wd~~~g~~~~~~ 266 (268)
+..+. .+..+++++ ++++|++|+.|+.|++||+.+++.+..+
T Consensus 238 ~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 289 (342)
T 1yfq_A 238 FRCHRLNLKDTNLAYPVNSIEFSP-RHKFLYTAGSDGIISCWNLQTRKKIKNF 289 (342)
T ss_dssp EECCCCCTTCCSSCCCEEEEEECT-TTCCEEEEETTSCEEEEETTTTEEEEEC
T ss_pred eecccccccccccceeEEEEEEcC-CCCEEEEecCCceEEEEcCccHhHhhhh
Confidence 65543 445667776 6899999999999999999999987764
No 68
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.1e-34 Score=245.59 Aligned_cols=236 Identities=21% Similarity=0.316 Sum_probs=202.0
Q ss_pred cCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCCCcEEEEeCCCCC
Q 024372 15 HSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGD 94 (268)
Q Consensus 15 h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~ 94 (268)
|.+.|.+++|+| +|++|++|+.|+.|++|+ .+++.+..+.+|...|.+++|+|++.++++++.|+.|++||+.++.
T Consensus 107 ~~~~v~~~~~s~---~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 182 (425)
T 1r5m_A 107 TTNQVTCLAWSH---DGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGT 182 (425)
T ss_dssp -CBCEEEEEECT---TSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTE
T ss_pred CCCceEEEEEcC---CCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCc
Confidence 788999999985 899999999999999999 7788999999999999999999999999999999999999997665
Q ss_pred eeeee---------------------------------------------------------ccCCeEEEEEECCCCCEE
Q 024372 95 EKHSF---------------------------------------------------------EHKHIVRACAFSEDTHLL 117 (268)
Q Consensus 95 ~~~~~---------------------------------------------------------~~~~~v~~v~~~~~~~~l 117 (268)
....+ .|...|.+++|+|+++.|
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 262 (425)
T 1r5m_A 183 VMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLL 262 (425)
T ss_dssp EEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEE
T ss_pred EEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEE
Confidence 43211 255678999999999999
Q ss_pred EEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEeeCCCeEEEEeCCCCceEEeecC-CCCEEEEEEC
Q 024372 118 LTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLET-KSPVTSAEVS 196 (268)
Q Consensus 118 ~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~-~~~v~~~~~s 196 (268)
++++.|+.|++||++..+ ....+..|...+.+++|+|++ ++++++.|+.|++||+++++++..+.. ..++.+++|+
T Consensus 263 ~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~i~~~~~~~~~--~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s 339 (425)
T 1r5m_A 263 LSASDDGTLRIWHGGNGN-SQNCFYGHSQSIVSASWVGDD--KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRIS 339 (425)
T ss_dssp EEEETTSCEEEECSSSBS-CSEEECCCSSCEEEEEEETTT--EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEEC
T ss_pred EEEcCCCEEEEEECCCCc-cceEecCCCccEEEEEECCCC--EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEc
Confidence 999999999999998654 345555678899999999977 666777889999999999999888864 5679999999
Q ss_pred CCCcEEEEe-CCCeEEEEeCCCce--------------------eeeEEeCC--C-CceeeEEcCCCCCEEEeccCCCeE
Q 024372 197 RDGRYITTA-DGSSVKFWDANHFG--------------------LVKGYNMP--C-NTESASLEPKLGNIFIAGGEDMWV 252 (268)
Q Consensus 197 ~~g~~l~~~-~~~~v~~wd~~~~~--------------------~~~~~~~~--~-~~~~~~~~~~~~~~~~~gs~d~~i 252 (268)
|++++++++ .++.|++||++... ++..+..+ . .+..+.+++ ++++|++|+.|+.|
T Consensus 340 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i 418 (425)
T 1r5m_A 340 QDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNC-AGNKISVAYSLQEG 418 (425)
T ss_dssp TTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECT-TSSEEEEEESSSCC
T ss_pred CCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccC-CCceEEEEecCceE
Confidence 999988764 68999999998777 77777665 2 556677776 68999999999999
Q ss_pred EEEECC
Q 024372 253 HVFDFH 258 (268)
Q Consensus 253 ~~wd~~ 258 (268)
++||++
T Consensus 419 ~iw~~~ 424 (425)
T 1r5m_A 419 SVVAIP 424 (425)
T ss_dssp EEEECC
T ss_pred EEEeec
Confidence 999985
No 69
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=6.8e-35 Score=249.38 Aligned_cols=239 Identities=15% Similarity=0.167 Sum_probs=190.1
Q ss_pred eecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCc---cCcEEEEEecCCCcEEEEeeCCCcEEEEe
Q 024372 13 HGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGH---KGAVWSCCLDANALFSASGSADFTAKLWD 89 (268)
Q Consensus 13 ~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h---~~~V~~~~~~~~~~~l~s~s~D~~v~iw~ 89 (268)
.+|...|.+++|+| .++++|++++.|++|++||... +.+..+..| ...|.+++|+|++.++++++.|+.|++||
T Consensus 115 ~~h~~~v~~~~~~~--~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d 191 (383)
T 3ei3_B 115 MGPGDAITGMKFNQ--FNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLG 191 (383)
T ss_dssp CSTTCBEEEEEEET--TEEEEEEEEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEE
T ss_pred CCcCCceeEEEeCC--CCCCEEEEEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEE
Confidence 47999999999996 2678999999999999999985 555566544 48899999999999999999999999999
Q ss_pred CCCCCeeeee-ccCCeEEEEEECCCCC-EEEEeeCCCeEEEEECCCCCCC--CeEecCCcccEEEEEEeC-CCCcEEEEe
Q 024372 90 ALTGDEKHSF-EHKHIVRACAFSEDTH-LLLTGGFEKILRIFDLNRPDAP--PREVGNSSGSIRTVAWLH-SDQTILSSC 164 (268)
Q Consensus 90 ~~~~~~~~~~-~~~~~v~~v~~~~~~~-~l~s~~~d~~i~~~d~~~~~~~--~~~~~~~~~~v~~~~~~~-~~~~~~~~~ 164 (268)
+. +.....+ .|...|.+++|+|+++ ++++++.|+.|++||++..+.. ......|.+.+.+++|+| ++. +++++
T Consensus 192 ~~-~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-~l~~~ 269 (383)
T 3ei3_B 192 LD-GHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDST-KLLTT 269 (383)
T ss_dssp TT-SCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSC-EEEEE
T ss_pred CC-CCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCC-EEEEE
Confidence 94 5555555 4888999999999998 9999999999999999763321 222225788999999999 554 56666
Q ss_pred eCCCeEEEEeCCCCceEEeecC------------------CCCEEEEEECCCCcEEEEeCCCeEEEEeCCCceeeeEEeC
Q 024372 165 TDSGGVRLWDARSGKIVQTLET------------------KSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGYNM 226 (268)
Q Consensus 165 ~~d~~i~iwd~~~~~~~~~~~~------------------~~~v~~~~~s~~g~~l~~~~~~~v~~wd~~~~~~~~~~~~ 226 (268)
+.|+.|++||+++++....+.. ...+..++++|++++ +++.|+.|++||+++.+++..+..
T Consensus 270 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~-s~s~d~~i~iwd~~~~~~~~~l~~ 348 (383)
T 3ei3_B 270 DQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL-LLNDKRTIDIYDANSGGLVHQLRD 348 (383)
T ss_dssp ESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT-CTTCCCCEEEEETTTCCEEEEECB
T ss_pred cCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc-ccCCCCeEEEEecCCCceeeeecC
Confidence 7789999999998876554431 123455777777777 556789999999999988888875
Q ss_pred C--CCceee-EEcCCCCCEEEeccCCCeEEEEECCC
Q 024372 227 P--CNTESA-SLEPKLGNIFIAGGEDMWVHVFDFHT 259 (268)
Q Consensus 227 ~--~~~~~~-~~~~~~~~~~~~gs~d~~i~~wd~~~ 259 (268)
+ ...... ++++ ++++|++|+ |+.|++||+++
T Consensus 349 ~~~~~~~~~~~~s~-~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 349 PNAAGIISLNKFSP-TGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp TTBCSCCCEEEECT-TSSEEEEEE-TTEEEEEECC-
T ss_pred CCCCceEEEEEEec-CccEEEEec-CCcEEEEecCC
Confidence 3 334444 6666 699999997 99999999864
No 70
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=6.4e-34 Score=255.35 Aligned_cols=245 Identities=28% Similarity=0.474 Sum_probs=203.9
Q ss_pred EEeeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCCCcEEEEe
Q 024372 10 LVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWD 89 (268)
Q Consensus 10 ~~~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw~ 89 (268)
..+.+|..+|.+++|+| +|.+|++++.|+++++|+.. ++.+..+.+|...|.+++|+|++.++++++.|+.+++|+
T Consensus 297 ~~~~~h~~~v~~~~~~~---~~~~l~t~~~d~~i~~w~~~-~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~ 372 (577)
T 2ymu_A 297 QTLTGHSSSVWGVAFSP---DGQTIASASDDKTVKLWNRN-GQHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWN 372 (577)
T ss_dssp EEECCCSSCEEEEEECT---TSSEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred EEEecCCCCeEEEEECC---CCCEEEEEeCCCeEEEEeCC-CCeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEc
Confidence 34568999999999985 89999999999999999975 455678899999999999999999999999999999999
Q ss_pred CCCCCeeeee-ccCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEeeCCC
Q 024372 90 ALTGDEKHSF-EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSG 168 (268)
Q Consensus 90 ~~~~~~~~~~-~~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~ 168 (268)
.. ++....+ .|...|++++|+|++++|++++.|+.|++||... ........|...+.+++|+|++. ++++++.|+
T Consensus 373 ~~-~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~--~~~~~~~~~~~~v~~~~~s~d~~-~l~~~~~d~ 448 (577)
T 2ymu_A 373 RN-GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG--QLLQTLTGHSSSVWGVAFSPDDQ-TIASASDDK 448 (577)
T ss_dssp TT-CCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTC--CEEEEEECCSSCEEEEEECTTSS-EEEEEETTS
T ss_pred CC-CCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCC--CEEEEecCCCCCeEEEEECCCCC-EEEEEcCCC
Confidence 64 4444444 5888999999999999999999999999999642 23455567888999999998776 556677889
Q ss_pred eEEEEeCCCCceEEeec-CCCCEEEEEECCCCcEEEE-eCCCeEEEEeCCCceeeeEEeCCCC-ceeeEEcCCCCCEEEe
Q 024372 169 GVRLWDARSGKIVQTLE-TKSPVTSAEVSRDGRYITT-ADGSSVKFWDANHFGLVKGYNMPCN-TESASLEPKLGNIFIA 245 (268)
Q Consensus 169 ~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~~g~~l~~-~~~~~v~~wd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 245 (268)
+|++||. +++.+..+. +..++.+++|+|++++|++ +.|+.|++||. ++++++.+..+.. +..++++| ++++|++
T Consensus 449 ~v~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~-dg~~l~s 525 (577)
T 2ymu_A 449 TVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSP-DGQTIAS 525 (577)
T ss_dssp EEEEEET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECT-TSSCEEE
T ss_pred EEEEEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcC-CCCEEEE
Confidence 9999996 466666665 4567999999999999876 57899999996 5667777776544 55677776 6999999
Q ss_pred ccCCCeEEEEECCCCcEEeec
Q 024372 246 GGEDMWVHVFDFHTGEQIAIT 266 (268)
Q Consensus 246 gs~d~~i~~wd~~~g~~~~~~ 266 (268)
|+.|+.|++||. +|+.+..+
T Consensus 526 ~~~dg~v~lwd~-~~~~~~~~ 545 (577)
T 2ymu_A 526 ASDDKTVKLWNR-NGQLLQTL 545 (577)
T ss_dssp EETTSEEEEECT-TSCEEEEE
T ss_pred EECcCEEEEEeC-CCCEEEEE
Confidence 999999999995 68877654
No 71
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.5e-34 Score=236.67 Aligned_cols=245 Identities=20% Similarity=0.283 Sum_probs=202.4
Q ss_pred eecEEeeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCC---CeEEEeeCccCcEEEEEecCCCcEEEEeeCCC
Q 024372 7 AVPLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETG---DWIGTFEGHKGAVWSCCLDANALFSASGSADF 83 (268)
Q Consensus 7 ~~~~~~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~---~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~ 83 (268)
.....+.+|...|.+++|+| ++++|++|+.|+.+++|++... +.+..+.+|...|.+++| ++.++++++.|+
T Consensus 50 ~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~ 124 (313)
T 3odt_A 50 WLGTVVYTGQGFLNSVCYDS---EKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDK 124 (313)
T ss_dssp EEEEEEEECSSCEEEEEEET---TTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTS
T ss_pred EEEEEeecCCccEEEEEECC---CCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCC
Confidence 34555678999999999995 8999999999999999987664 567888999999999999 567899999999
Q ss_pred cEEEEeCCCCCeeeee-ccCCeEEEEEECC-CCCEEEEeeCCCeEEEEECCCCCCCCeEec-CCcccEEEEEEeCCCCcE
Q 024372 84 TAKLWDALTGDEKHSF-EHKHIVRACAFSE-DTHLLLTGGFEKILRIFDLNRPDAPPREVG-NSSGSIRTVAWLHSDQTI 160 (268)
Q Consensus 84 ~v~iw~~~~~~~~~~~-~~~~~v~~v~~~~-~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~ 160 (268)
.|++|| .......+ .|...+.++.|+| +++.+++++.|+.+++||... ...... .+...+.+++|+|++.
T Consensus 125 ~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~---~~~~~~~~~~~~i~~~~~~~~~~-- 197 (313)
T 3odt_A 125 TAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQNDK---VIKTFSGIHNDVVRHLAVVDDGH-- 197 (313)
T ss_dssp EEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETTE---EEEEECSSCSSCEEEEEEEETTE--
T ss_pred CEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecCc---eEEEEeccCcccEEEEEEcCCCe--
Confidence 999999 44444444 4788999999988 899999999999999999432 223333 3788999999998775
Q ss_pred EEEeeCCCeEEEEeCCCCceEEeec-CCCCEEEEEECCCCcEEEEeCCCeEEEEeCCCceeeeEEeCCCC-ceeeEEcCC
Q 024372 161 LSSCTDSGGVRLWDARSGKIVQTLE-TKSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGYNMPCN-TESASLEPK 238 (268)
Q Consensus 161 ~~~~~~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~~g~~l~~~~~~~v~~wd~~~~~~~~~~~~~~~-~~~~~~~~~ 238 (268)
+++++.|+.|++||+++++.+..+. +..++.+++|+|++++++++.|+.|++||+++.+.+..+..+.. ...+.+.+
T Consensus 198 ~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~- 276 (313)
T 3odt_A 198 FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNGDIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMS- 276 (313)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSCEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECT-
T ss_pred EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCCCEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEcc-
Confidence 5566778999999999999998887 45679999999999877788899999999999988888877654 45666666
Q ss_pred CCCEEEeccCCCeEEEEECCCCcEEee
Q 024372 239 LGNIFIAGGEDMWVHVFDFHTGEQIAI 265 (268)
Q Consensus 239 ~~~~~~~gs~d~~i~~wd~~~g~~~~~ 265 (268)
+++ +++++.|+.|++||+.+++.+..
T Consensus 277 ~~~-~~~~~~dg~i~iw~~~~~~~~~~ 302 (313)
T 3odt_A 277 NGD-IIVGSSDNLVRIFSQEKSRWASE 302 (313)
T ss_dssp TSC-EEEEETTSCEEEEESCGGGCCC-
T ss_pred CCC-EEEEeCCCcEEEEeCCCCceeeh
Confidence 566 67799999999999998876543
No 72
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=9.4e-34 Score=248.15 Aligned_cols=248 Identities=21% Similarity=0.347 Sum_probs=202.0
Q ss_pred eecEEeeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEec--CCCcEEEEeeCCCc
Q 024372 7 AVPLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLD--ANALFSASGSADFT 84 (268)
Q Consensus 7 ~~~~~~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~--~~~~~l~s~s~D~~ 84 (268)
.....+.+|.++|.+++|+| ++ +|++|+.|++|++||..+++.+..+.+|.+.|.+++|. +++.++++|+.|++
T Consensus 153 ~~~~~~~~h~~~V~~l~~~~---~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~ 228 (464)
T 3v7d_B 153 KFLLQLSGHDGGVWALKYAH---GG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNT 228 (464)
T ss_dssp EEEEEECCCSSCEEEEEECS---TT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSC
T ss_pred cEEEEEeCCCcCEEEEEEcC---CC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCc
Confidence 34455678999999999985 55 89999999999999999999999999999999999998 57789999999999
Q ss_pred EEEEeCCCCCeee------------------------eeccCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeE
Q 024372 85 AKLWDALTGDEKH------------------------SFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPRE 140 (268)
Q Consensus 85 v~iw~~~~~~~~~------------------------~~~~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~ 140 (268)
|++||+.+..... ...|...+.++ +++++.+++|+.|+.|++||+++++. ...
T Consensus 229 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~-~~~ 305 (464)
T 3v7d_B 229 LHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKC-LYI 305 (464)
T ss_dssp EEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEE-EEE
T ss_pred EEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcE-EEE
Confidence 9999998765321 11355566665 67788999999999999999976543 345
Q ss_pred ecCCcccEEEEEEeCCCCcEEEEeeCCCeEEEEeCCCCceEEeecC-CCCEEEEEECCCCcEEEEeCCCeEEEEeCCCce
Q 024372 141 VGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLET-KSPVTSAEVSRDGRYITTADGSSVKFWDANHFG 219 (268)
Q Consensus 141 ~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~-~~~v~~~~~s~~g~~l~~~~~~~v~~wd~~~~~ 219 (268)
+..|...+.+++|+|++. .+++++.|+.|++||+++++++.++.. ...+.++.+++ ..+++++.|+.|++||+++..
T Consensus 306 ~~~~~~~v~~~~~~~~~~-~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~-~~l~s~s~dg~v~vwd~~~~~ 383 (464)
T 3v7d_B 306 LSGHTDRIYSTIYDHERK-RCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSD-KFLVSAAADGSIRGWDANDYS 383 (464)
T ss_dssp ECCCSSCEEEEEEETTTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECS-SEEEEEETTSEEEEEETTTCC
T ss_pred ecCCCCCEEEEEEcCCCC-EEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEcC-CEEEEEeCCCcEEEEECCCCc
Confidence 556788999999998766 455667889999999999999999874 45699999984 334455689999999999877
Q ss_pred eeeEEeCCCCceeeEEcCCCCCEEEeccCCCeEEEEECCCCcEEee
Q 024372 220 LVKGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIAI 265 (268)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~gs~d~~i~~wd~~~g~~~~~ 265 (268)
...............+.+ +++++++|+ |+.|++||+++|+.+..
T Consensus 384 ~~~~~~~~~~~~~~~~~~-~~~~l~~~~-dg~i~iwd~~~g~~~~~ 427 (464)
T 3v7d_B 384 RKFSYHHTNLSAITTFYV-SDNILVSGS-ENQFNIYNLRSGKLVHA 427 (464)
T ss_dssp EEEEEECTTCCCEEEEEE-CSSEEEEEE-TTEEEEEETTTCCEEES
T ss_pred eeeeecCCCCccEEEEEe-CCCEEEEec-CCeEEEEECCCCcEEeh
Confidence 666665554555566666 688999888 89999999999998864
No 73
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=3.3e-34 Score=249.44 Aligned_cols=247 Identities=18% Similarity=0.265 Sum_probs=203.0
Q ss_pred EEeeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCC----------CCeEEEeeCccCcEEEEEecCCCc-EEEE
Q 024372 10 LVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGET----------GDWIGTFEGHKGAVWSCCLDANAL-FSAS 78 (268)
Q Consensus 10 ~~~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~----------~~~~~~~~~h~~~V~~~~~~~~~~-~l~s 78 (268)
....+|.+.|++++|+| .++.+||+++.|+.|++|+..+ .+.+..+.+|...|.+++|+|++. +|++
T Consensus 122 ~~~~~h~~~v~~l~~~p--~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s 199 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMP--QNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLS 199 (430)
T ss_dssp EEEEEESSCCSEEEEET--TEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEE
T ss_pred EEEEcCCCcEEEEEECC--CCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEE
Confidence 33458999999999996 2378999999999999999876 577888999999999999999988 9999
Q ss_pred eeCCCcEEEEeCCCCCe-------eeee-ccCCeEEEEEECC-CCCEEEEeeCCCeEEEEECCCCC--CCCeEecCCccc
Q 024372 79 GSADFTAKLWDALTGDE-------KHSF-EHKHIVRACAFSE-DTHLLLTGGFEKILRIFDLNRPD--APPREVGNSSGS 147 (268)
Q Consensus 79 ~s~D~~v~iw~~~~~~~-------~~~~-~~~~~v~~v~~~~-~~~~l~s~~~d~~i~~~d~~~~~--~~~~~~~~~~~~ 147 (268)
|+.||+|++|++.++.. ...+ .|...|.+++|+| ++.+|++++.|+.|++||++... ........|...
T Consensus 200 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 279 (430)
T 2xyi_A 200 ASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAE 279 (430)
T ss_dssp ECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSC
T ss_pred EeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCC
Confidence 99999999999987432 2222 5788999999999 78899999999999999998653 334455577889
Q ss_pred EEEEEEeCCCCcEEEEeeCCCeEEEEeCCC-CceEEeec-CCCCEEEEEECCCCc-EEE-EeCCCeEEEEeCCCc-----
Q 024372 148 IRTVAWLHSDQTILSSCTDSGGVRLWDARS-GKIVQTLE-TKSPVTSAEVSRDGR-YIT-TADGSSVKFWDANHF----- 218 (268)
Q Consensus 148 v~~~~~~~~~~~~~~~~~~d~~i~iwd~~~-~~~~~~~~-~~~~v~~~~~s~~g~-~l~-~~~~~~v~~wd~~~~----- 218 (268)
+++++|+|.+..++++++.||.|++||+++ +..+..+. +...+.+++|+|+++ +++ ++.|+.|++||+...
T Consensus 280 v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~ 359 (430)
T 2xyi_A 280 VNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQS 359 (430)
T ss_dssp EEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCC
T ss_pred eEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccC
Confidence 999999999888888889999999999998 55677776 556799999999985 444 457899999999762
Q ss_pred ---------eeeeEEeCCC-CceeeEEcCCCCC-EEEeccCCCeEEEEECCC
Q 024372 219 ---------GLVKGYNMPC-NTESASLEPKLGN-IFIAGGEDMWVHVFDFHT 259 (268)
Q Consensus 219 ---------~~~~~~~~~~-~~~~~~~~~~~~~-~~~~gs~d~~i~~wd~~~ 259 (268)
.++..+..+. .+..+.+++. +. +|++++.|+.|++|++..
T Consensus 360 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~-~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 360 TEDAEDGPPELLFIHGGHTAKISDFSWNPN-EPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp HHHHHHCCTTEEEECCCCSSCEEEEEECSS-STTEEEEEETTSEEEEEEECH
T ss_pred ccccccCCcceEEEcCCCCCCceEEEECCC-CCCEEEEEECCCCEEEeEccc
Confidence 3444444443 3667788874 66 899999999999999863
No 74
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3e-35 Score=272.78 Aligned_cols=248 Identities=19% Similarity=0.268 Sum_probs=199.1
Q ss_pred EEeeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCC--CCCeEEEeeCccCcEEEEEecCC--CcEEEEeeCCCcE
Q 024372 10 LVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGE--TGDWIGTFEGHKGAVWSCCLDAN--ALFSASGSADFTA 85 (268)
Q Consensus 10 ~~~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~--~~~~~~~~~~h~~~V~~~~~~~~--~~~l~s~s~D~~v 85 (268)
.++.+|.++|++++|+| +|++|++|+.||+|++|+.. +++.+..+.+|.++|.+++|+++ +.++++|+.||+|
T Consensus 3 ~~l~gH~~~V~~l~~s~---dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I 79 (753)
T 3jro_A 3 VIANAHNELIHDAVLDY---YGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKV 79 (753)
T ss_dssp -----CCCCEEEECCCS---SSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCE
T ss_pred eecccCcceeEEEEECC---CCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeE
Confidence 35679999999999985 89999999999999999987 55778899999999999999987 8999999999999
Q ss_pred EEEeCCCCC--eeeee-ccCCeEEEEEECCC--CCEEEEeeCCCeEEEEECCCCCC-CCeEecCCcccEEEEEEeCC---
Q 024372 86 KLWDALTGD--EKHSF-EHKHIVRACAFSED--THLLLTGGFEKILRIFDLNRPDA-PPREVGNSSGSIRTVAWLHS--- 156 (268)
Q Consensus 86 ~iw~~~~~~--~~~~~-~~~~~v~~v~~~~~--~~~l~s~~~d~~i~~~d~~~~~~-~~~~~~~~~~~v~~~~~~~~--- 156 (268)
++||+.++. ....+ .|...|.+++|+|+ ++.+++|+.|+.|++||++.... .......|...+.++.|+|.
T Consensus 80 ~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~ 159 (753)
T 3jro_A 80 LIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIE 159 (753)
T ss_dssp EEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC--
T ss_pred EEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccc
Confidence 999998875 33333 48889999999999 99999999999999999986533 23445567889999999985
Q ss_pred ---------CCcEEEEeeCCCeEEEEeCCCC----ceEEeec-CCCCEEEEEECCC---CcEEEE-eCCCeEEEEeCCCc
Q 024372 157 ---------DQTILSSCTDSGGVRLWDARSG----KIVQTLE-TKSPVTSAEVSRD---GRYITT-ADGSSVKFWDANHF 218 (268)
Q Consensus 157 ---------~~~~~~~~~~d~~i~iwd~~~~----~~~~~~~-~~~~v~~~~~s~~---g~~l~~-~~~~~v~~wd~~~~ 218 (268)
++.++++++.||.|++||++++ .+...+. +..++.+++|+|+ ++++++ +.|+.|++||++..
T Consensus 160 ~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~ 239 (753)
T 3jro_A 160 EDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNE 239 (753)
T ss_dssp -------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSS
T ss_pred cccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCC
Confidence 3456667778899999999887 3445555 4567999999999 888765 56899999999875
Q ss_pred ee-----eeEE-eCCCCceeeEEcCCCCCEEEeccCCCeEEEEECCCCc
Q 024372 219 GL-----VKGY-NMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGE 261 (268)
Q Consensus 219 ~~-----~~~~-~~~~~~~~~~~~~~~~~~~~~gs~d~~i~~wd~~~g~ 261 (268)
.. +... .....+..++++| ++++|++|+.|+.|++||+.++.
T Consensus 240 ~~~~~~~~~~~~~~~~~v~~l~~sp-dg~~l~s~s~Dg~I~vwd~~~~~ 287 (753)
T 3jro_A 240 QGPWKKTLLKEEKFPDVLWRASWSL-SGNVLALSGGDNKVTLWKENLEG 287 (753)
T ss_dssp SSCCBCCBSSSSCCSSCCCCEEECT-TTCCEEEECSSSCEECCBCCSSS
T ss_pred CCcceeEEeccCCCCCceEEEEEcC-CCCEEEEEcCCCEEEEEecCCCC
Confidence 31 1111 1233455677777 69999999999999999997543
No 75
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.2e-34 Score=244.87 Aligned_cols=246 Identities=20% Similarity=0.254 Sum_probs=194.7
Q ss_pred EEeeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCC-CCeE-EEeeCccCcEEEEEecCCCcEEEEeeCCCcEEE
Q 024372 10 LVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGET-GDWI-GTFEGHKGAVWSCCLDANALFSASGSADFTAKL 87 (268)
Q Consensus 10 ~~~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~-~~~~-~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~i 87 (268)
..+.+|.+.|++++|+|...+|++|++|+.|++|++|+..+ ++.+ ..+.+|.+.|.+++|+|++.++++++.|+.|++
T Consensus 33 ~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~i 112 (368)
T 3mmy_A 33 EVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKM 112 (368)
T ss_dssp ECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred EeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEE
Confidence 34568999999999997322379999999999999999997 5554 788999999999999999999999999999999
Q ss_pred EeCCCCCeeeeeccCCeEEEEEE--CCCCCEEEEeeCCCeEEEEECCCCCCCCeEecCCc--------------------
Q 024372 88 WDALTGDEKHSFEHKHIVRACAF--SEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSS-------------------- 145 (268)
Q Consensus 88 w~~~~~~~~~~~~~~~~v~~v~~--~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~-------------------- 145 (268)
||+.++.......|...|.+++| ++++++|++++.|+.|++||+++++.. .....+.
T Consensus 113 wd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (368)
T 3mmy_A 113 WDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPM-MVLQLPERCYCADVIYPMAVVATAERG 191 (368)
T ss_dssp EETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCS-EEEECSSCEEEEEEETTEEEEEEGGGC
T ss_pred EEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEE-EEEecCCCceEEEecCCeeEEEeCCCc
Confidence 99999998888889999999999 899999999999999999999865432 2222111
Q ss_pred ---------------------ccEEEEEEeCCCC---cEEEEeeCCCeEEEEeCCCC---ceEEeecCCC----------
Q 024372 146 ---------------------GSIRTVAWLHSDQ---TILSSCTDSGGVRLWDARSG---KIVQTLETKS---------- 188 (268)
Q Consensus 146 ---------------------~~v~~~~~~~~~~---~~~~~~~~d~~i~iwd~~~~---~~~~~~~~~~---------- 188 (268)
....++.+.+... ..+++++.|+.|++||++.. +.+..+..+.
T Consensus 192 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (368)
T 3mmy_A 192 LIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQ 271 (368)
T ss_dssp EEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCE
T ss_pred EEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccc
Confidence 1233333333222 22667778899999999887 4455555433
Q ss_pred ---CEEEEEECCCCcEEEE-eCCCeEEEEeCCCceeeeEEeCCC-CceeeEEcCCCCCEEEeccCCCeEEEEEC
Q 024372 189 ---PVTSAEVSRDGRYITT-ADGSSVKFWDANHFGLVKGYNMPC-NTESASLEPKLGNIFIAGGEDMWVHVFDF 257 (268)
Q Consensus 189 ---~v~~~~~s~~g~~l~~-~~~~~v~~wd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~gs~d~~i~~wd~ 257 (268)
++.+++|+|++++|++ +.|+.|++||+++.+++..+..+. .+..++++| ++++|++|+.|+..+.|++
T Consensus 272 ~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~~s~d~~~~~~~~ 344 (368)
T 3mmy_A 272 DIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNH-NGNIFAYASSYDWSKGHEF 344 (368)
T ss_dssp EECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECT-TSSCEEEEECCCSTTCGGG
T ss_pred cccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECC-CCCeEEEEecccccccccc
Confidence 6999999999988776 478999999999998888877644 455677776 6999999998875554443
No 76
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.7e-35 Score=252.32 Aligned_cols=204 Identities=13% Similarity=0.101 Sum_probs=160.9
Q ss_pred ecEEeeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCC---eEEEeeCccCcEEEEEecCCCcEEEEeeCCCc
Q 024372 8 VPLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGD---WIGTFEGHKGAVWSCCLDANALFSASGSADFT 84 (268)
Q Consensus 8 ~~~~~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~---~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~ 84 (268)
....+.+|.++|.+++|+| +|++|++++.|++|++||..+++ ....+.+|...|.+++|+|++.++++++.|++
T Consensus 47 ~~~~~~~h~~~v~~~~~s~---~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 123 (377)
T 3dwl_C 47 HARTFSDHDKIVTCVDWAP---KSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARV 123 (377)
T ss_dssp ECCCBCCCSSCEEEEEECT---TTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSC
T ss_pred EEEEEecCCceEEEEEEeC---CCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCe
Confidence 3445668999999999985 88999999999999999999887 67778899999999999999999999999999
Q ss_pred EEEEeCCCCCe---eeeec--cCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCC-----------------CCeEec
Q 024372 85 AKLWDALTGDE---KHSFE--HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDA-----------------PPREVG 142 (268)
Q Consensus 85 v~iw~~~~~~~---~~~~~--~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~-----------------~~~~~~ 142 (268)
|++||+.++.. ...+. |...|.+++|+|++++|++++.|+.|++||++.... ....+
T Consensus 124 i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 202 (377)
T 3dwl_C 124 ISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY- 202 (377)
T ss_dssp EEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-
T ss_pred EEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-
Confidence 99999988762 44443 788999999999999999999999999999853210 11122
Q ss_pred CCcccEEEEEEeCCCCcEEEEeeCCCeEEEEeCCCCce----EEeecC-CCCEEEEEECCCCcEEEEeCCCeEEEEeCC
Q 024372 143 NSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKI----VQTLET-KSPVTSAEVSRDGRYITTADGSSVKFWDAN 216 (268)
Q Consensus 143 ~~~~~v~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~----~~~~~~-~~~v~~~~~s~~g~~l~~~~~~~v~~wd~~ 216 (268)
.|.+.+.+++|+|++.. +++++.|+.|++||++++++ +..+.. ..++.+++|+|++++|+++.++.+.+|+..
T Consensus 203 ~~~~~v~~~~~sp~~~~-l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~~~ 280 (377)
T 3dwl_C 203 PSGGWVHAVGFSPSGNA-LAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPILLQGN 280 (377)
T ss_dssp CCSSSEEEEEECTTSSC-EEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEEEECCC
T ss_pred cCCceEEEEEECCCCCE-EEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEEEEEeC
Confidence 67788999999998764 55667789999999999887 566654 456999999999999998877677788764
No 77
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=8.4e-35 Score=253.51 Aligned_cols=249 Identities=12% Similarity=0.101 Sum_probs=184.6
Q ss_pred EEeeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeC--ccCcEEEEEecCCCcEEEEeeCCCcEEE
Q 024372 10 LVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEG--HKGAVWSCCLDANALFSASGSADFTAKL 87 (268)
Q Consensus 10 ~~~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~--h~~~V~~~~~~~~~~~l~s~s~D~~v~i 87 (268)
+.+.+|.++|++++|+| .++++|++|+.|++|++||++++........ +...+.+++|++++.++++|+.|+.|++
T Consensus 158 ~~~~gH~~~V~~l~f~p--~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~ 235 (435)
T 4e54_B 158 IKGIGAGGSITGLKFNP--LNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVIL 235 (435)
T ss_dssp ECCCSSSCCCCEEEECS--SCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEE
T ss_pred EEccCCCCCEEEEEEeC--CCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEee
Confidence 33468999999999997 3688999999999999999987654433333 3446788999999999999999999999
Q ss_pred EeCCCCCeeeeeccCCeEEEEEECCCCC-EEEEeeCCCeEEEEECCCCCCCCe--EecCCcccEEEEEEeCCCCcEEEEe
Q 024372 88 WDALTGDEKHSFEHKHIVRACAFSEDTH-LLLTGGFEKILRIFDLNRPDAPPR--EVGNSSGSIRTVAWLHSDQTILSSC 164 (268)
Q Consensus 88 w~~~~~~~~~~~~~~~~v~~v~~~~~~~-~l~s~~~d~~i~~~d~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~~~ 164 (268)
||+..........|...|.+++|+|++. ++++|+.|+.|++||++....... ....|...|.+++|+|++. +++++
T Consensus 236 wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~-~l~s~ 314 (435)
T 4e54_B 236 LNMDGKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGA-RLLTT 314 (435)
T ss_dssp EESSSCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSS-EEEEE
T ss_pred eccCcceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCC-eeEEE
Confidence 9987554433345888999999999875 788999999999999976543322 2245778999999998775 45566
Q ss_pred eCCCeEEEEeCCCCceEEeecCC-------CCEEEEEECCCCcEEEEe-------------CCCeEEEEeCCCceeeeEE
Q 024372 165 TDSGGVRLWDARSGKIVQTLETK-------SPVTSAEVSRDGRYITTA-------------DGSSVKFWDANHFGLVKGY 224 (268)
Q Consensus 165 ~~d~~i~iwd~~~~~~~~~~~~~-------~~v~~~~~s~~g~~l~~~-------------~~~~v~~wd~~~~~~~~~~ 224 (268)
+.|+.|+|||++++++...+..+ ..+..+.++|++.+++++ +++.|++||..+++.+..+
T Consensus 315 ~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l 394 (435)
T 4e54_B 315 DQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQL 394 (435)
T ss_dssp ESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEE
T ss_pred cCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEE
Confidence 77899999999998877655322 123345566666554432 2357999999998887766
Q ss_pred eCC--CCceeeE-EcCCCCCEEEeccCCCeEEEEECCCCcEE
Q 024372 225 NMP--CNTESAS-LEPKLGNIFIAGGEDMWVHVFDFHTGEQI 263 (268)
Q Consensus 225 ~~~--~~~~~~~-~~~~~~~~~~~gs~d~~i~~wd~~~g~~~ 263 (268)
..+ ..+.++. ++| +|++|++|+ |+.|++||+++|+..
T Consensus 395 ~~~~~~~v~s~~~fsp-dg~~lasg~-d~~i~iW~~~~gk~r 434 (435)
T 4e54_B 395 YDPESSGISSLNEFNP-MGDTLASAM-GYHILIWSQQEARTR 434 (435)
T ss_dssp CCSSCCCCCCEEEECT-TSSCEEEEC-SSEEEECCCC-----
T ss_pred eCCCCCcEEEEEEECC-CCCEEEEEc-CCcEEEEECCcCeee
Confidence 432 2344443 555 799998876 778999999998864
No 78
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=2.5e-34 Score=247.78 Aligned_cols=246 Identities=19% Similarity=0.288 Sum_probs=200.3
Q ss_pred EeeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCC-------CeEEEeeCccCcEEEEEecCCC-cEEEEeeCC
Q 024372 11 VCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETG-------DWIGTFEGHKGAVWSCCLDANA-LFSASGSAD 82 (268)
Q Consensus 11 ~~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~-------~~~~~~~~h~~~V~~~~~~~~~-~~l~s~s~D 82 (268)
.+.+|.++|++++|+|. ++++|++|+.|++|++|+..++ +.+..+.+|...|.+++|+|++ .++++++.|
T Consensus 76 ~~~~h~~~V~~~~~~p~--~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d 153 (402)
T 2aq5_A 76 LVCGHTAPVLDIAWCPH--NDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCD 153 (402)
T ss_dssp CBCCCSSCEEEEEECTT--CTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETT
T ss_pred eEecCCCCEEEEEeCCC--CCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCC
Confidence 35689999999999852 7889999999999999999988 6678899999999999999998 699999999
Q ss_pred CcEEEEeCCCCCeeeee---ccCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEecCCccc-EEEEEEeCCCC
Q 024372 83 FTAKLWDALTGDEKHSF---EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGS-IRTVAWLHSDQ 158 (268)
Q Consensus 83 ~~v~iw~~~~~~~~~~~---~~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~-v~~~~~~~~~~ 158 (268)
++|++||+.+++....+ .|...|.+++|+|+++.|++++.|+.|++||+++++........|.+. +.++.|++++
T Consensus 154 g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 232 (402)
T 2aq5_A 154 NVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEG- 232 (402)
T ss_dssp SCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTT-
T ss_pred CEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCC-
Confidence 99999999999888877 388899999999999999999999999999998754332221445544 7889999865
Q ss_pred cEEEEe---eCCCeEEEEeCCCCce---EEeecCCCCEEEEEECCCCcEEE-Ee-CCCeEEEEeCCCce----eeeEEeC
Q 024372 159 TILSSC---TDSGGVRLWDARSGKI---VQTLETKSPVTSAEVSRDGRYIT-TA-DGSSVKFWDANHFG----LVKGYNM 226 (268)
Q Consensus 159 ~~~~~~---~~d~~i~iwd~~~~~~---~~~~~~~~~v~~~~~s~~g~~l~-~~-~~~~v~~wd~~~~~----~~~~~~~ 226 (268)
.+++++ +.|+.|++||+++++. ...+.+...+.+++|+|++++++ ++ .|+.|++||+...+ .+..+..
T Consensus 233 ~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~ 312 (402)
T 2aq5_A 233 KILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSS 312 (402)
T ss_dssp EEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECC
T ss_pred cEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeeccccc
Confidence 466666 5779999999998764 33445667799999999999875 45 58999999998766 3344444
Q ss_pred CCCceeeEEcCCCCCEEEeccCCCeEEEEECCCCcE
Q 024372 227 PCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQ 262 (268)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~gs~d~~i~~wd~~~g~~ 262 (268)
......+++.| ++.++++ .|+.+++|++.+++.
T Consensus 313 ~~~v~~~~~sp-~~~~~~s--~~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 313 KESQRGMGYMP-KRGLEVN--KCEIARFYKLHERKC 345 (402)
T ss_dssp SSCCSEEEECC-GGGSCGG--GTEEEEEEEEETTEE
T ss_pred CCcccceEEec-cccccee--cceeEEEEEcCCCcE
Confidence 45667788887 5776554 566899999987654
No 79
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=2e-34 Score=243.62 Aligned_cols=246 Identities=11% Similarity=0.211 Sum_probs=196.1
Q ss_pred eeecCCCeeeEEEecCCCC-CcEEEEEeCCCCeEEeeCCCCCeEEEeeC-----ccCcEEEEEecCC----CcEEEEeeC
Q 024372 12 CHGHSRPVVDLFYSPITPD-GFFLVSASKDSSPMLRNGETGDWIGTFEG-----HKGAVWSCCLDAN----ALFSASGSA 81 (268)
Q Consensus 12 ~~~h~~~v~~~~f~~~~~d-g~~l~s~s~d~~i~iw~~~~~~~~~~~~~-----h~~~V~~~~~~~~----~~~l~s~s~ 81 (268)
..+|.++|.+++|+|.+++ ..++++++.++.|++|+..+++.+..+.. |...|.+++|+|+ +.++++|+.
T Consensus 14 ~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~ 93 (366)
T 3k26_A 14 KEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGS 93 (366)
T ss_dssp ECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEET
T ss_pred ecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecC
Confidence 4589999999999985333 34566666677999999998887777764 4577999999998 679999999
Q ss_pred CCcEEEEeCCCCCeeeeec-cCCeEEEEEECC-CCCEEEEeeCCCeEEEEECCCCCCCCeEe---cCCcccEEEEEEeCC
Q 024372 82 DFTAKLWDALTGDEKHSFE-HKHIVRACAFSE-DTHLLLTGGFEKILRIFDLNRPDAPPREV---GNSSGSIRTVAWLHS 156 (268)
Q Consensus 82 D~~v~iw~~~~~~~~~~~~-~~~~v~~v~~~~-~~~~l~s~~~d~~i~~~d~~~~~~~~~~~---~~~~~~v~~~~~~~~ 156 (268)
|+.|++||+.+++....+. |...|.+++|+| +++.|++|+.|+.|++||++.++. .... ..|...+.+++|+|+
T Consensus 94 dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~v~~~~~~~~ 172 (366)
T 3k26_A 94 RGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTL-VAIFGGVEGHRDEVLSADYDLL 172 (366)
T ss_dssp TCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEE-EEEECSTTSCSSCEEEEEECTT
T ss_pred CCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeE-EEEecccccccCceeEEEECCC
Confidence 9999999999999888776 889999999999 999999999999999999976543 2333 467889999999987
Q ss_pred CCcEEEEeeCCCeEEEEeCCCCceEEeec-----------------------------CCCCEEEEEECCCCcEEE-EeC
Q 024372 157 DQTILSSCTDSGGVRLWDARSGKIVQTLE-----------------------------TKSPVTSAEVSRDGRYIT-TAD 206 (268)
Q Consensus 157 ~~~~~~~~~~d~~i~iwd~~~~~~~~~~~-----------------------------~~~~v~~~~~s~~g~~l~-~~~ 206 (268)
+. ++++++.|+.|++||+++++.+..+. +...+.+++|+ +++++ ++.
T Consensus 173 ~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~ 249 (366)
T 3k26_A 173 GE-KIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSC 249 (366)
T ss_dssp SS-EEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECS
T ss_pred CC-EEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEec
Confidence 65 45566778999999999876554332 55678999998 44555 457
Q ss_pred CCeEEEEeCCCcee--------------eeEEeCCC-CceeeEEcCCC--CCEEEeccCCCeEEEEECCCCcE
Q 024372 207 GSSVKFWDANHFGL--------------VKGYNMPC-NTESASLEPKL--GNIFIAGGEDMWVHVFDFHTGEQ 262 (268)
Q Consensus 207 ~~~v~~wd~~~~~~--------------~~~~~~~~-~~~~~~~~~~~--~~~~~~gs~d~~i~~wd~~~g~~ 262 (268)
|+.|++||++.... +..+..+. .+..+.+++ + +++|++|+.|+.|++||+.+++.
T Consensus 250 d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~~~l~~~~~dg~i~vwd~~~~~~ 321 (366)
T 3k26_A 250 ENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSM-DFWQKMLALGNQVGKLYVWDLEVEDP 321 (366)
T ss_dssp SSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEE-CTTSSEEEEECTTSCEEEEECCSSSG
T ss_pred CCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcC-CCCCcEEEEEecCCcEEEEECCCCCC
Confidence 89999999876533 55555433 345566665 5 89999999999999999998764
No 80
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.2e-33 Score=254.69 Aligned_cols=245 Identities=18% Similarity=0.198 Sum_probs=210.2
Q ss_pred eecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCC----CeEEEeeCccCc-EEEEEecC--CCcEEEEeeCCCcE
Q 024372 13 HGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETG----DWIGTFEGHKGA-VWSCCLDA--NALFSASGSADFTA 85 (268)
Q Consensus 13 ~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~----~~~~~~~~h~~~-V~~~~~~~--~~~~l~s~s~D~~v 85 (268)
..|.+.|.+++|+| +|++|++++ ++.+++|+..++ +.+..+.+|.+. |.+++|+| ++.++++++.|++|
T Consensus 15 ~~~~~~v~~~~~sp---dg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v 90 (615)
T 1pgu_A 15 STQRNFTTHLSYDP---TTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKV 90 (615)
T ss_dssp CCCTTCCCCCEEET---TTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEE
T ss_pred CCccCceeEEEECC---CCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEE
Confidence 47999999999995 899999998 889999999999 899999999999 99999999 99999999999999
Q ss_pred EEEeCCCC--------Ceeeeec-cCCeEEEEEECCCCCEEEEeeCC----CeEEEEECCCCCCCCeEecCCcccEEEEE
Q 024372 86 KLWDALTG--------DEKHSFE-HKHIVRACAFSEDTHLLLTGGFE----KILRIFDLNRPDAPPREVGNSSGSIRTVA 152 (268)
Q Consensus 86 ~iw~~~~~--------~~~~~~~-~~~~v~~v~~~~~~~~l~s~~~d----~~i~~~d~~~~~~~~~~~~~~~~~v~~~~ 152 (268)
++||+.++ .....+. |...|.+++|+|+++.|++++.+ +.|++||.. ........|.+.+.+++
T Consensus 91 ~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~---~~~~~~~~~~~~v~~~~ 167 (615)
T 1pgu_A 91 IVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSG---NSLGEVSGHSQRINACH 167 (615)
T ss_dssp EEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTC---CEEEECCSCSSCEEEEE
T ss_pred EEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEECC---CcceeeecCCccEEEEE
Confidence 99999754 3444443 78899999999999999999988 688888842 23445567888999999
Q ss_pred EeCCCCcEEEEeeCCCeEEEEeCCCCceEEeecC-CC---CEEEEEECCC-CcEEEE-eCCCeEEEEeCCCceeeeEE-e
Q 024372 153 WLHSDQTILSSCTDSGGVRLWDARSGKIVQTLET-KS---PVTSAEVSRD-GRYITT-ADGSSVKFWDANHFGLVKGY-N 225 (268)
Q Consensus 153 ~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~-~~---~v~~~~~s~~-g~~l~~-~~~~~v~~wd~~~~~~~~~~-~ 225 (268)
|+|++..++++++.|+.|++||+++++.+..+.. .. .+.+++|+|+ ++++++ +.++.|++||+++.+.+..+ .
T Consensus 168 ~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~ 247 (615)
T 1pgu_A 168 LKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIED 247 (615)
T ss_dssp ECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCB
T ss_pred ECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecc
Confidence 9999887788888899999999999999988874 44 6999999999 988775 56899999999998888887 3
Q ss_pred ----CCCCceeeEEcCCCCCEEEeccCCCeEEEEECCCCcEEeec
Q 024372 226 ----MPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIAIT 266 (268)
Q Consensus 226 ----~~~~~~~~~~~~~~~~~~~~gs~d~~i~~wd~~~g~~~~~~ 266 (268)
....+..+.+. ++++|++++.|+.|++||+.+++.+..+
T Consensus 248 ~~~~~~~~v~~~~~~--~~~~l~~~~~d~~i~~wd~~~~~~~~~~ 290 (615)
T 1pgu_A 248 DQEPVQGGIFALSWL--DSQKFATVGADATIRVWDVTTSKCVQKW 290 (615)
T ss_dssp TTBCCCSCEEEEEES--SSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred cccccCCceEEEEEc--CCCEEEEEcCCCcEEEEECCCCcEEEEE
Confidence 33445566666 6999999999999999999998887653
No 81
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.9e-34 Score=266.78 Aligned_cols=240 Identities=12% Similarity=0.096 Sum_probs=197.6
Q ss_pred eeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCCCcEEEEeCC
Q 024372 12 CHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDAL 91 (268)
Q Consensus 12 ~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw~~~ 91 (268)
..||.+.|++++|+| +|++||+|+.|++|++|+...++.+..+. |..+|.+++|+| +.+|++++.|++|++||+.
T Consensus 13 ~~gh~~~V~~lafsp---dg~~lAsgs~Dg~I~lw~~~~~~~~~~~~-~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~ 87 (902)
T 2oaj_A 13 KYGMSSKPIAAAFDF---TQNLLAIATVTGEVHIYGQQQVEVVIKLE-DRSAIKEMRFVK-GIYLVVINAKDTVYVLSLY 87 (902)
T ss_dssp EEECSSCEEEEEEET---TTTEEEEEETTSEEEEECSTTCEEEEECS-SCCCEEEEEEET-TTEEEEEETTCEEEEEETT
T ss_pred ccCCCCCcEEEEECC---CCCEEEEEeCCCEEEEEeCCCcEEEEEcC-CCCCEEEEEEcC-CCEEEEEECcCeEEEEECC
Confidence 359999999999995 89999999999999999998887766554 888999999999 7899999999999999999
Q ss_pred CCCeeeeeccCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCC----------eEecCCcccEEEEEEeCCCCcEE
Q 024372 92 TGDEKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPP----------REVGNSSGSIRTVAWLHSDQTIL 161 (268)
Q Consensus 92 ~~~~~~~~~~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~----------~~~~~~~~~v~~~~~~~~~~~~~ 161 (268)
++++...+.+...|.+++|+|+++++++|+.|+.|++||++.+.... .....|.+.|.+++|+|.+..++
T Consensus 88 ~~~~~~~~~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l 167 (902)
T 2oaj_A 88 SQKVLTTVFVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTV 167 (902)
T ss_dssp TCSEEEEEECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEE
T ss_pred CCcEEEEEcCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEE
Confidence 99998888888899999999999999999999999999997653210 11234778999999999776677
Q ss_pred EEeeCCCeEEEEeCCCCceEEeecCC-------------------CCEEEEEECCCCcEEEE-eCCCeEEEEeCCCceee
Q 024372 162 SSCTDSGGVRLWDARSGKIVQTLETK-------------------SPVTSAEVSRDGRYITT-ADGSSVKFWDANHFGLV 221 (268)
Q Consensus 162 ~~~~~d~~i~iwd~~~~~~~~~~~~~-------------------~~v~~~~~s~~g~~l~~-~~~~~v~~wd~~~~~~~ 221 (268)
++++.|+.| +||++++++++.+..+ ..|.+++|+|+|++|++ +.|+.|++||+++++++
T Consensus 168 ~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~ 246 (902)
T 2oaj_A 168 LISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMI 246 (902)
T ss_dssp EEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEE
T ss_pred EEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEE
Confidence 788889999 9999999998887654 56999999999998876 57899999999988776
Q ss_pred eEEeC-----C-------------C-CceeeEEcC---CC-CCEEEeccCCC-----eEEEEEC
Q 024372 222 KGYNM-----P-------------C-NTESASLEP---KL-GNIFIAGGEDM-----WVHVFDF 257 (268)
Q Consensus 222 ~~~~~-----~-------------~-~~~~~~~~~---~~-~~~~~~gs~d~-----~i~~wd~ 257 (268)
..... + . .+..++|.+ ++ +.++++|+.|. .+.+|++
T Consensus 247 ~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~ 310 (902)
T 2oaj_A 247 MARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDL 310 (902)
T ss_dssp EEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEE
T ss_pred EEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEec
Confidence 53221 1 1 244566643 12 35777887763 7889984
No 82
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=2.7e-33 Score=271.80 Aligned_cols=252 Identities=25% Similarity=0.451 Sum_probs=217.2
Q ss_pred cEEeeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCCCcEEEE
Q 024372 9 PLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLW 88 (268)
Q Consensus 9 ~~~~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw 88 (268)
.+.+.+|.+.|++++|+| +|++||+|+.|++|++||..+++.+.++.+|.+.|.+++|+|++.++++++.|++|++|
T Consensus 608 ~~~~~~h~~~v~~~~~s~---~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vw 684 (1249)
T 3sfz_A 608 RLVVRPHTDAVYHACFSQ---DGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIW 684 (1249)
T ss_dssp SEEECCCSSCEEEEEECT---TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred eEEEecccccEEEEEECC---CCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEE
Confidence 345679999999999985 89999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCeeeeec-cCCeEEEEEECC--CCCEEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEee
Q 024372 89 DALTGDEKHSFE-HKHIVRACAFSE--DTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCT 165 (268)
Q Consensus 89 ~~~~~~~~~~~~-~~~~v~~v~~~~--~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 165 (268)
|+.++.....+. |...|.+++|+| ++.++++|+.|+.|++||++++.. ......|.+.|.+++|+|++. ++++++
T Consensus 685 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~-~~~~~~h~~~v~~~~~sp~~~-~l~s~s 762 (1249)
T 3sfz_A 685 DSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKEC-RNTMFGHTNSVNHCRFSPDDE-LLASCS 762 (1249)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSE-EEEECCCSSCEEEEEECSSTT-EEEEEE
T ss_pred ECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcch-hheecCCCCCEEEEEEecCCC-EEEEEE
Confidence 999999888774 888999999999 567999999999999999987543 345557888999999998776 566677
Q ss_pred CCCeEEEEeCCCCceEEeecCC--------------CCEEEEEECCCCcEEEEeCCCeEEEEeCCCceeeeEEeC--CCC
Q 024372 166 DSGGVRLWDARSGKIVQTLETK--------------SPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGYNM--PCN 229 (268)
Q Consensus 166 ~d~~i~iwd~~~~~~~~~~~~~--------------~~v~~~~~s~~g~~l~~~~~~~v~~wd~~~~~~~~~~~~--~~~ 229 (268)
.||.|++||+++++....+... ..+.+++|+|+|++++++.++.+.+||+.+...+..+.. ...
T Consensus 763 ~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~ 842 (1249)
T 3sfz_A 763 ADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHST 842 (1249)
T ss_dssp SSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSC
T ss_pred CCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCc
Confidence 7899999999999887665421 257789999999999888889999999998887776653 334
Q ss_pred ceeeEEcCCCCCEEEeccCCCeEEEEECCCCcEEeec
Q 024372 230 TESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIAIT 266 (268)
Q Consensus 230 ~~~~~~~~~~~~~~~~gs~d~~i~~wd~~~g~~~~~~ 266 (268)
...+.+++ +++++++|+.|+.|++||+.+++.+...
T Consensus 843 v~~~~~sp-~~~~l~~~~~dg~v~vwd~~~~~~~~~~ 878 (1249)
T 3sfz_A 843 IQYCDFSP-YDHLAVIALSQYCVELWNIDSRLKVADC 878 (1249)
T ss_dssp CCEEEECS-STTEEEEECSSSCEEEEETTTTEEEEEE
T ss_pred eEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCceeeec
Confidence 56677776 6999999999999999999988877653
No 83
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6e-34 Score=253.23 Aligned_cols=246 Identities=11% Similarity=0.020 Sum_probs=187.6
Q ss_pred EeeecCCCeeeEEEecC---CCCCcEEEEEeCCCCeEEeeCCCCCe-----------EEEeeCccCcEEEEEecCCCcEE
Q 024372 11 VCHGHSRPVVDLFYSPI---TPDGFFLVSASKDSSPMLRNGETGDW-----------IGTFEGHKGAVWSCCLDANALFS 76 (268)
Q Consensus 11 ~~~~h~~~v~~~~f~~~---~~dg~~l~s~s~d~~i~iw~~~~~~~-----------~~~~~~h~~~V~~~~~~~~~~~l 76 (268)
.+.+|.+.|.+++|+|. .+++.+||+|+.|++|++||+.+++. ..++.+|...|.+++|++++ .|
T Consensus 202 ~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~l 280 (524)
T 2j04_B 202 TIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TV 280 (524)
T ss_dssp EEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EE
T ss_pred EEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-eE
Confidence 35578899999999984 23578999999999999999987642 24788999999999999865 78
Q ss_pred EEeeCCCcEEEEeCCCCC-eeeee-ccCCeEEEE--EECCCC-CEEEEeeCCCeEEEEECCCCCCCCeEecCCc-ccEEE
Q 024372 77 ASGSADFTAKLWDALTGD-EKHSF-EHKHIVRAC--AFSEDT-HLLLTGGFEKILRIFDLNRPDAPPREVGNSS-GSIRT 150 (268)
Q Consensus 77 ~s~s~D~~v~iw~~~~~~-~~~~~-~~~~~v~~v--~~~~~~-~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~-~~v~~ 150 (268)
++|+.||+|++||+.++. +...+ .|...|.++ .|+|++ ++|+||+.|++|++||+++++.......+.. +.+.+
T Consensus 281 asgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~ 360 (524)
T 2j04_B 281 VCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVP 360 (524)
T ss_dssp EEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCC
T ss_pred EEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccc
Confidence 999999999999998764 33333 588899999 578887 8999999999999999976543322222222 34788
Q ss_pred EEEeCCCCcEEEEeeCCCeEEEEeCCCCceEEeec-CCCCEEEEEECCCCcEEEE-eCCCeEEEEeCCCc-----e----
Q 024372 151 VAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLE-TKSPVTSAEVSRDGRYITT-ADGSSVKFWDANHF-----G---- 219 (268)
Q Consensus 151 ~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~~g~~l~~-~~~~~v~~wd~~~~-----~---- 219 (268)
++|+|++.. ++++++|++|+|||++++.++.++. +...|.+++|+|+|++|++ +.|++|++||+... +
T Consensus 361 v~fsp~~~~-l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~ 439 (524)
T 2j04_B 361 VVYCPQIYS-YIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARRLLHGIKNSSA 439 (524)
T ss_dssp EEEETTTTE-EEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSSTTTCC-----
T ss_pred eEeCCCcCe-EEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHhhccccccCcc
Confidence 999998765 5566677999999999999877665 5567999999999988765 57899999986321 0
Q ss_pred -----eeeEEe-------------------------------CCCCceeeEEcCCC--CCEEEeccCCCeEEEEECC
Q 024372 220 -----LVKGYN-------------------------------MPCNTESASLEPKL--GNIFIAGGEDMWVHVFDFH 258 (268)
Q Consensus 220 -----~~~~~~-------------------------------~~~~~~~~~~~~~~--~~~~~~gs~d~~i~~wd~~ 258 (268)
.+.... ....+.+++|+|+. +.++++|+.|+.|+||++.
T Consensus 440 ~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~ 516 (524)
T 2j04_B 440 TQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLS 516 (524)
T ss_dssp -CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECS
T ss_pred ceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEEcc
Confidence 010000 01123456777742 4599999999999999986
No 84
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=2.7e-34 Score=246.13 Aligned_cols=226 Identities=23% Similarity=0.380 Sum_probs=188.8
Q ss_pred CCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCCCcEEEEeCCCCCeeeeec-cCCeEEEEEECCCCCEEE
Q 024372 40 DSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEKHSFE-HKHIVRACAFSEDTHLLL 118 (268)
Q Consensus 40 d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~-~~~~v~~v~~~~~~~~l~ 118 (268)
+..+..|+..+..+.++|.+|.+.|.+++|+|++.+|+||+.|++|++||+.+++....+. |...|.+++|+|+++.|+
T Consensus 45 ~~~~~~~~~~~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~la 124 (380)
T 3iz6_a 45 GRTAVSFNPTDLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVA 124 (380)
T ss_dssp GGGCCCCCCCCCEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEE
T ss_pred cccccccccceeEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEE
Confidence 3445568888888899999999999999999999999999999999999999988877765 777899999999999999
Q ss_pred EeeCCCeEEEEECCCCC------CCCeEecCCcccEEEEEEeCCCCcEEEEeeCCCeEEEEeCCCCceEEeec------C
Q 024372 119 TGGFEKILRIFDLNRPD------APPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLE------T 186 (268)
Q Consensus 119 s~~~d~~i~~~d~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~------~ 186 (268)
+|+.|+.+++||+.... ........|.+.+.++.|.|++...+++++.|++|++||+++++++..+. +
T Consensus 125 s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h 204 (380)
T 3iz6_a 125 CGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGH 204 (380)
T ss_dssp ECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSC
T ss_pred EeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCC
Confidence 99999999999986421 12234557888899999999877777788889999999999999988762 3
Q ss_pred CCCEEEEEECC-CCcEEEE-eCCCeEEEEeCCC-ceeeeEEeCCC-CceeeEEcCCCCCEEEeccCCCeEEEEECCCCcE
Q 024372 187 KSPVTSAEVSR-DGRYITT-ADGSSVKFWDANH-FGLVKGYNMPC-NTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQ 262 (268)
Q Consensus 187 ~~~v~~~~~s~-~g~~l~~-~~~~~v~~wd~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~gs~d~~i~~wd~~~g~~ 262 (268)
...+.++.++| ++.++++ +.|+.|++||++. ...+..+..+. .+..+.++| ++++|++||.|+.|++||+++|+.
T Consensus 205 ~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p-~~~~l~s~s~D~~i~lwd~~~~~~ 283 (380)
T 3iz6_a 205 TADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFP-DGQRFGTGSDDGTCRLFDMRTGHQ 283 (380)
T ss_dssp CSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECT-TSSEEEEECSSSCEEEEETTTTEE
T ss_pred ccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEec-CCCeEEEEcCCCeEEEEECCCCcE
Confidence 45699999987 7777765 5789999999984 45666776554 456777777 699999999999999999999988
Q ss_pred Eeec
Q 024372 263 IAIT 266 (268)
Q Consensus 263 ~~~~ 266 (268)
+..+
T Consensus 284 ~~~~ 287 (380)
T 3iz6_a 284 LQVY 287 (380)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 7654
No 85
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.1e-32 Score=237.68 Aligned_cols=243 Identities=16% Similarity=0.208 Sum_probs=203.3
Q ss_pred ecCCCe--eeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeC-ccCcEEEEEecCCCcEEEEeeCCCcEEEEeC
Q 024372 14 GHSRPV--VDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEG-HKGAVWSCCLDANALFSASGSADFTAKLWDA 90 (268)
Q Consensus 14 ~h~~~v--~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~-h~~~V~~~~~~~~~~~l~s~s~D~~v~iw~~ 90 (268)
+|...+ .+++|++ ..+++++.|++|++|+..+++....+.. |...|.+++|+|++.++++|+.|+.|++||+
T Consensus 89 ~~~~~~~~~~~~~s~-----~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~ 163 (401)
T 4aez_A 89 GIIDDYYLNLLDWSN-----LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDV 163 (401)
T ss_dssp TCCCCTTCBCEEECT-----TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred CCcCCceEEEEeecC-----CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEEC
Confidence 566553 4566652 4578899999999999999998887776 8899999999999999999999999999999
Q ss_pred CCCCeeeee-ccCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEeeCCCe
Q 024372 91 LTGDEKHSF-EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGG 169 (268)
Q Consensus 91 ~~~~~~~~~-~~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~ 169 (268)
.+++....+ .|...|.+++| +++.+++|+.|+.|++||++...........|.+.+.+++|+|++. ++++++.|+.
T Consensus 164 ~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~d~~ 240 (401)
T 4aez_A 164 ESQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGL-QLASGGNDNV 240 (401)
T ss_dssp TTCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSS-EEEEEETTSC
T ss_pred cCCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCC-EEEEEeCCCe
Confidence 998887777 48889999999 4679999999999999999855544556667889999999998654 5667778899
Q ss_pred EEEEeCCCCceEEeec-CCCCEEEEEECCCC-cEEEEe---CCCeEEEEeCCCceeeeEEeCCCCceeeEEcCCCCCEEE
Q 024372 170 VRLWDARSGKIVQTLE-TKSPVTSAEVSRDG-RYITTA---DGSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFI 244 (268)
Q Consensus 170 i~iwd~~~~~~~~~~~-~~~~v~~~~~s~~g-~~l~~~---~~~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (268)
|++||+++++.+..+. +...+.+++|+|++ .+++++ .|+.|++||+++.+.+..+..+.....+.+++ ++++++
T Consensus 241 v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~ 319 (401)
T 4aez_A 241 VQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQVTSLIWSP-HSKEIM 319 (401)
T ss_dssp EEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSSCEEEEEECS-SSSEEE
T ss_pred EEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEEECC-CCCeEE
Confidence 9999999999988875 45679999999976 455554 48999999999999998888777778888887 588888
Q ss_pred e--ccCCCeEEEEECCCCcEEee
Q 024372 245 A--GGEDMWVHVFDFHTGEQIAI 265 (268)
Q Consensus 245 ~--gs~d~~i~~wd~~~g~~~~~ 265 (268)
+ |+.|+.|++||+.+++....
T Consensus 320 ~~~g~~dg~i~v~~~~~~~~~~~ 342 (401)
T 4aez_A 320 STHGFPDNNLSIWSYSSSGLTKQ 342 (401)
T ss_dssp EEECTTTCEEEEEEEETTEEEEE
T ss_pred EEeecCCCcEEEEecCCccceeE
Confidence 7 56899999999988766543
No 86
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=8.1e-34 Score=242.13 Aligned_cols=242 Identities=11% Similarity=0.115 Sum_probs=183.9
Q ss_pred EeeecCCCeeeEEEecCCCCCcEEEEE-----------eCCCCeEEeeCCCCC-eE---EEe-----eCccCcEEEEEec
Q 024372 11 VCHGHSRPVVDLFYSPITPDGFFLVSA-----------SKDSSPMLRNGETGD-WI---GTF-----EGHKGAVWSCCLD 70 (268)
Q Consensus 11 ~~~~h~~~v~~~~f~~~~~dg~~l~s~-----------s~d~~i~iw~~~~~~-~~---~~~-----~~h~~~V~~~~~~ 70 (268)
.|.+|+..|.+++|+ +..+++| +.|+++++|+..+.+ .+ ... ..+...++.++|+
T Consensus 68 ~l~~~~~~v~s~~~~-----~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fS 142 (365)
T 4h5i_A 68 ALEDNDDSPTAIDAS-----KGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYIS 142 (365)
T ss_dssp ECCTTSCCCCEEEEE-----TTEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEEC
T ss_pred EccCCCCceEEEEeC-----CCEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEc
Confidence 356788889988885 3456655 567889999876543 11 111 2345568999999
Q ss_pred CCCcEEE--EeeCCCcEEEEeCCCCCeeeeeccCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCe-EecCCccc
Q 024372 71 ANALFSA--SGSADFTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPR-EVGNSSGS 147 (268)
Q Consensus 71 ~~~~~l~--s~s~D~~v~iw~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~-~~~~~~~~ 147 (268)
||+++++ +++.|++|+|||+.++.++..+.|...|.+++|+|+++++++++.++. .+|+..++..... ....|...
T Consensus 143 pDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s~~~~-~~~~~~~~~~~~~~~~~~~~~~ 221 (365)
T 4h5i_A 143 REGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYITGSSL-EVISTVTGSCIARKTDFDKNWS 221 (365)
T ss_dssp TTSSCEEEEESCSSCEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEECSSCE-EEEETTTCCEEEEECCCCTTEE
T ss_pred CCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEeccceeE-EEEEeccCcceeeeecCCCCCC
Confidence 9999865 566899999999999999999999999999999999999999986655 5555544433222 23456778
Q ss_pred EEEEEEeCCCCcEEEEeeCCC---eEEEEeCCCCceE----Eeec-CCCCEEEEEECCCCcEEEEe-CCCeEEEEeCCCc
Q 024372 148 IRTVAWLHSDQTILSSCTDSG---GVRLWDARSGKIV----QTLE-TKSPVTSAEVSRDGRYITTA-DGSSVKFWDANHF 218 (268)
Q Consensus 148 v~~~~~~~~~~~~~~~~~~d~---~i~iwd~~~~~~~----~~~~-~~~~v~~~~~s~~g~~l~~~-~~~~v~~wd~~~~ 218 (268)
+.+++|+|++..+++++.+.+ .+++||+...... ..+. +..+|.+++|+|+|++|+++ .|+.|++||++++
T Consensus 222 v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~ 301 (365)
T 4h5i_A 222 LSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDL 301 (365)
T ss_dssp EEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTT
T ss_pred EEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCC
Confidence 999999998876665554422 6899998876542 2333 45679999999999998864 7899999999999
Q ss_pred eeeeEE-eCCC-CceeeEEcCCCCCEEEeccCCCeEEEEECCC
Q 024372 219 GLVKGY-NMPC-NTESASLEPKLGNIFIAGGEDMWVHVFDFHT 259 (268)
Q Consensus 219 ~~~~~~-~~~~-~~~~~~~~~~~~~~~~~gs~d~~i~~wd~~~ 259 (268)
++++.+ ..+. .+.+++|+| +|++|++||.|++|+|||+..
T Consensus 302 ~~~~~~~~gH~~~V~~v~fSp-dg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 302 SMSKIFKQAHSFAITEVTISP-DSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp EEEEEETTSSSSCEEEEEECT-TSCEEEEEETTSEEEEEECCT
T ss_pred cEEEEecCcccCCEEEEEECC-CCCEEEEEeCCCeEEEEEcCC
Confidence 988876 4444 456777777 799999999999999999853
No 87
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=2.5e-32 Score=237.69 Aligned_cols=231 Identities=18% Similarity=0.317 Sum_probs=194.1
Q ss_pred ecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCCCcEEEEeCCCC
Q 024372 14 GHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTG 93 (268)
Q Consensus 14 ~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw~~~~~ 93 (268)
+|..+|.+++| +|++|++|+.|++|++||..+++.+..+.+|.+.|.+++| ++.++++|+.||+|++||+.++
T Consensus 131 ~~~~~v~~~~~-----d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~ 203 (435)
T 1p22_A 131 ETSKGVYCLQY-----DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTG 203 (435)
T ss_dssp SSCCCEEEEEC-----CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSC
T ss_pred CCCCcEEEEEE-----CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCC
Confidence 57778998877 6789999999999999999999999999999999999988 6789999999999999999999
Q ss_pred Ceeeeec-cCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCC--eEecCCcccEEEEEEeCCCCcEEEEeeCCCeE
Q 024372 94 DEKHSFE-HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPP--REVGNSSGSIRTVAWLHSDQTILSSCTDSGGV 170 (268)
Q Consensus 94 ~~~~~~~-~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i 170 (268)
+....+. |...|.++.|++ ..+++|+.|+.|++||++.+.... .....|.+.+.++++. +.++++++.|+.|
T Consensus 204 ~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~l~s~~~dg~i 278 (435)
T 1p22_A 204 EMLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD---DKYIVSASGDRTI 278 (435)
T ss_dssp CEEEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEE---TTEEEEEETTSEE
T ss_pred cEEEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeC---CCEEEEEeCCCeE
Confidence 8877774 778899999974 589999999999999998655432 4455788899999982 3466777788999
Q ss_pred EEEeCCCCceEEeecC-CCCEEEEEECCCCcEEE-EeCCCeEEEEeCCCceeeeEEeCCCCce-eeEEcCCCCCEEEecc
Q 024372 171 RLWDARSGKIVQTLET-KSPVTSAEVSRDGRYIT-TADGSSVKFWDANHFGLVKGYNMPCNTE-SASLEPKLGNIFIAGG 247 (268)
Q Consensus 171 ~iwd~~~~~~~~~~~~-~~~v~~~~~s~~g~~l~-~~~~~~v~~wd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~gs 247 (268)
++||+++++++..+.. ...+.++.++ +++++ ++.|+.|++||+++++++..+..+.... .+.+ ++.+|++|+
T Consensus 279 ~vwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~---~~~~l~sg~ 353 (435)
T 1p22_A 279 KVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF---DNKRIVSGA 353 (435)
T ss_dssp EEEETTTCCEEEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC---CSSEEEEEE
T ss_pred EEEECCcCcEEEEEcCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe---cCCEEEEEe
Confidence 9999999999998874 4568888884 45555 5678999999999998888887655433 3333 588999999
Q ss_pred CCCeEEEEECCCCc
Q 024372 248 EDMWVHVFDFHTGE 261 (268)
Q Consensus 248 ~d~~i~~wd~~~g~ 261 (268)
.|+.|++||+.+++
T Consensus 354 ~dg~i~vwd~~~~~ 367 (435)
T 1p22_A 354 YDGKIKVWDLVAAL 367 (435)
T ss_dssp TTSCEEEEEHHHHT
T ss_pred CCCcEEEEECCCCC
Confidence 99999999997665
No 88
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=5.7e-33 Score=230.16 Aligned_cols=208 Identities=19% Similarity=0.246 Sum_probs=169.9
Q ss_pred ecEEeeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCC--eEEEeeCccCcEEEEEecCC--CcEEEEeeCCC
Q 024372 8 VPLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGD--WIGTFEGHKGAVWSCCLDAN--ALFSASGSADF 83 (268)
Q Consensus 8 ~~~~~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~--~~~~~~~h~~~V~~~~~~~~--~~~l~s~s~D~ 83 (268)
....+.+|+++|.+++|+|. .+|++||+|+.|++|++||..+++ .+..+.+|...|.+++|+|+ +.++++++.|+
T Consensus 45 ~~~~l~gH~~~V~~v~~s~~-~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~ 123 (297)
T 2pm7_B 45 LIDTLTGHEGPVWRVDWAHP-KFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDG 123 (297)
T ss_dssp CCEEECCCSSCEEEEEECCG-GGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTS
T ss_pred EEEEEccccCCeEEEEecCC-CcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCC
Confidence 34567799999999999752 248899999999999999999874 56778899999999999997 78999999999
Q ss_pred cEEEEeCCCCCe---eeeeccCCeEEEEEECCC-------------CCEEEEeeCCCeEEEEECCCCCC---CCeEecCC
Q 024372 84 TAKLWDALTGDE---KHSFEHKHIVRACAFSED-------------THLLLTGGFEKILRIFDLNRPDA---PPREVGNS 144 (268)
Q Consensus 84 ~v~iw~~~~~~~---~~~~~~~~~v~~v~~~~~-------------~~~l~s~~~d~~i~~~d~~~~~~---~~~~~~~~ 144 (268)
+|++||+.++.. .....|...|.+++|+|+ ++.|++|+.|+.|++||++.+.. ....+..|
T Consensus 124 ~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H 203 (297)
T 2pm7_B 124 KVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGH 203 (297)
T ss_dssp EEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCC
T ss_pred cEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCC
Confidence 999999987532 223358889999999996 57999999999999999875432 12345578
Q ss_pred cccEEEEEEeCCC--CcEEEEeeCCCeEEEEeCCCCc---eEEee---cCCCCEEEEEECCCCcEEEE-eCCCeEEEEeC
Q 024372 145 SGSIRTVAWLHSD--QTILSSCTDSGGVRLWDARSGK---IVQTL---ETKSPVTSAEVSRDGRYITT-ADGSSVKFWDA 215 (268)
Q Consensus 145 ~~~v~~~~~~~~~--~~~~~~~~~d~~i~iwd~~~~~---~~~~~---~~~~~v~~~~~s~~g~~l~~-~~~~~v~~wd~ 215 (268)
.+.|.+++|+|++ +.++++++.|++|+|||+++++ ....+ .+...+.+++|+|+|++|++ +.|+.|++|+.
T Consensus 204 ~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~ 283 (297)
T 2pm7_B 204 SDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKE 283 (297)
T ss_dssp SSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEE
T ss_pred CCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEE
Confidence 8899999999975 5678888999999999998753 12233 23456999999999998875 57899999997
Q ss_pred C
Q 024372 216 N 216 (268)
Q Consensus 216 ~ 216 (268)
.
T Consensus 284 ~ 284 (297)
T 2pm7_B 284 N 284 (297)
T ss_dssp C
T ss_pred C
Confidence 5
No 89
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-33 Score=244.17 Aligned_cols=240 Identities=13% Similarity=0.107 Sum_probs=188.9
Q ss_pred eecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCC---CCCeEEEeeCc------------cCcEEEEE--ecCCCcE
Q 024372 13 HGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGE---TGDWIGTFEGH------------KGAVWSCC--LDANALF 75 (268)
Q Consensus 13 ~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~---~~~~~~~~~~h------------~~~V~~~~--~~~~~~~ 75 (268)
.+|..+|.+++|+| ++++|++|+.|++|++||+. +++.+..+.+| ...+.++. +++++.+
T Consensus 108 ~~h~~~v~~~~~~~---~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (437)
T 3gre_A 108 YDCSSTVTQITMIP---NFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSL 184 (437)
T ss_dssp EECSSCEEEEEECT---TSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEE
T ss_pred ccCCCCEEEEEEeC---CCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCE
Confidence 37999999999995 88999999999999999984 67666555543 33444444 4577999
Q ss_pred EEEeeCCCcEEEEeCCCCCeeeeec---cCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEE
Q 024372 76 SASGSADFTAKLWDALTGDEKHSFE---HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVA 152 (268)
Q Consensus 76 l~s~s~D~~v~iw~~~~~~~~~~~~---~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~ 152 (268)
+++++.|+.|++||+.+++....+. |...|.+++|+|++++|++|+.|+.|++||++.+.........+...|.+++
T Consensus 185 l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~ 264 (437)
T 3gre_A 185 LVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVE 264 (437)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEE
T ss_pred EEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEE
Confidence 9999999999999999999888775 6789999999999999999999999999999865432222225667899998
Q ss_pred EeCC---CCcEEEEeeCCCeEEEEeCCCCceEEeecC---------------------------CCCEEEEEECCCCcEE
Q 024372 153 WLHS---DQTILSSCTDSGGVRLWDARSGKIVQTLET---------------------------KSPVTSAEVSRDGRYI 202 (268)
Q Consensus 153 ~~~~---~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~---------------------------~~~v~~~~~s~~g~~l 202 (268)
|+|. ++.++++++.|+.|++||+++++++..+.. ...+.+++++ ++++|
T Consensus 265 ~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l 343 (437)
T 3gre_A 265 VCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKIL 343 (437)
T ss_dssp ECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEE
T ss_pred eccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEE
Confidence 7753 455788888899999999999998877652 2237788999 66766
Q ss_pred EE-eCCCeEEEEeCCCceeeeEEeC--------------------------------------CCCceeeEEcCC-CCCE
Q 024372 203 TT-ADGSSVKFWDANHFGLVKGYNM--------------------------------------PCNTESASLEPK-LGNI 242 (268)
Q Consensus 203 ~~-~~~~~v~~wd~~~~~~~~~~~~--------------------------------------~~~~~~~~~~~~-~~~~ 242 (268)
++ +.|+.|++||+++.+.+..+.. ...+..+.+.+. .+.+
T Consensus 344 ~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~ 423 (437)
T 3gre_A 344 LTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPL 423 (437)
T ss_dssp EEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEE
T ss_pred EecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceE
Confidence 65 4689999999988776655543 223445566653 3779
Q ss_pred EEeccCCCeEEEEE
Q 024372 243 FIAGGEDMWVHVFD 256 (268)
Q Consensus 243 ~~~gs~d~~i~~wd 256 (268)
|++|+.||.|++|+
T Consensus 424 l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 424 LVACDNSGLIGIFQ 437 (437)
T ss_dssp EEEEETTSCEEEEC
T ss_pred EEEEcCCceEEEeC
Confidence 99999999999995
No 90
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.2e-32 Score=248.31 Aligned_cols=254 Identities=13% Similarity=0.194 Sum_probs=209.1
Q ss_pred eecEEeeecCCC-eeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCC--------CeEEEeeCccCcEEEEEecCCCcEEE
Q 024372 7 AVPLVCHGHSRP-VVDLFYSPITPDGFFLVSASKDSSPMLRNGETG--------DWIGTFEGHKGAVWSCCLDANALFSA 77 (268)
Q Consensus 7 ~~~~~~~~h~~~-v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~--------~~~~~~~~h~~~V~~~~~~~~~~~l~ 77 (268)
.....+.+|.+. |.+++|+|. ++|++|++|+.|++|++|+..++ +.+..+.+|..+|.+++|+|++.+++
T Consensus 54 ~~~~~~~~h~~~~v~~~~~sp~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 132 (615)
T 1pgu_A 54 PPVVQFTGHGSSVVTTVKFSPI-KGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLC 132 (615)
T ss_dssp CSEEEECTTTTSCEEEEEECSS-TTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEE
T ss_pred ccceEEecCCCceEEEEEECcC-CCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEE
Confidence 455667799999 999999831 18899999999999999999755 67888999999999999999999999
Q ss_pred EeeCC----CcEEEEeCCCCCeeeee-ccCCeEEEEEECCCCC-EEEEeeCCCeEEEEECCCCCCCCeEecCCcc---cE
Q 024372 78 SGSAD----FTAKLWDALTGDEKHSF-EHKHIVRACAFSEDTH-LLLTGGFEKILRIFDLNRPDAPPREVGNSSG---SI 148 (268)
Q Consensus 78 s~s~D----~~v~iw~~~~~~~~~~~-~~~~~v~~v~~~~~~~-~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~---~v 148 (268)
+++.| +.|++|| .+.....+ .|...|.+++|+|+++ .+++++.|+.|++||+...+ ....+..|.+ .+
T Consensus 133 ~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~-~~~~~~~~~~~~~~v 209 (615)
T 1pgu_A 133 VVGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFK-FSASDRTHHKQGSFV 209 (615)
T ss_dssp EEECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBE-EEEEECSSSCTTCCE
T ss_pred EeccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcc-eeeeecccCCCCceE
Confidence 99988 6899998 44454444 4888999999999997 89999999999999987643 2344556777 89
Q ss_pred EEEEEeCCCCcEEEEeeCCCeEEEEeCCCCceEEee-----cCCCCEEEEEECCCCcEEEE-eCCCeEEEEeCCCceeee
Q 024372 149 RTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTL-----ETKSPVTSAEVSRDGRYITT-ADGSSVKFWDANHFGLVK 222 (268)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~-----~~~~~v~~~~~s~~g~~l~~-~~~~~v~~wd~~~~~~~~ 222 (268)
.+++|+|+++.++++++.|+.|++||+++++.+..+ .+..++.+++|+ +++++++ +.|+.|++||+++.+.+.
T Consensus 210 ~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~ 288 (615)
T 1pgu_A 210 RDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQ 288 (615)
T ss_dssp EEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEE
T ss_pred EEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEE
Confidence 999999983456667777899999999999999988 556779999999 9888765 568999999999998888
Q ss_pred EEeCCC----CceeeEEcCCCCCEEEeccCCCeEEEEECCCCcEEeec
Q 024372 223 GYNMPC----NTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIAIT 266 (268)
Q Consensus 223 ~~~~~~----~~~~~~~~~~~~~~~~~gs~d~~i~~wd~~~g~~~~~~ 266 (268)
.+..+. ........+ ++.++++|+.|+.|++||+.+++.+..+
T Consensus 289 ~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~~~~~~~~~ 335 (615)
T 1pgu_A 289 KWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYELGHDEVLKTI 335 (615)
T ss_dssp EEECCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEETTEEEEEEEE
T ss_pred EEcCCCCcccCceeEEEeC-CCCeEEEEECCCCEEEEECCCCcEEEEE
Confidence 887652 222222334 6899999999999999999988876654
No 91
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=4.9e-33 Score=239.67 Aligned_cols=238 Identities=19% Similarity=0.286 Sum_probs=189.7
Q ss_pred CeeeEEEecCCCCC-cEEEEEeCCCCeEEeeCCCC----CeEEEeeCccCcEEEEEecC-CCcEEEEeeCCCcEEEEeCC
Q 024372 18 PVVDLFYSPITPDG-FFLVSASKDSSPMLRNGETG----DWIGTFEGHKGAVWSCCLDA-NALFSASGSADFTAKLWDAL 91 (268)
Q Consensus 18 ~v~~~~f~~~~~dg-~~l~s~s~d~~i~iw~~~~~----~~~~~~~~h~~~V~~~~~~~-~~~~l~s~s~D~~v~iw~~~ 91 (268)
....++++| +. .++++++.||.|+||+..+. +.+..+.+|.+.|.+++|+| ++.++++|+.|++|++||+.
T Consensus 36 ~~~~~~~~~---~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~ 112 (402)
T 2aq5_A 36 DSGFCAVNP---KFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIP 112 (402)
T ss_dssp SSCSEEECS---SEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECC
T ss_pred CCCcEEECC---CeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEcc
Confidence 444577775 33 34556899999999998654 34556889999999999999 89999999999999999998
Q ss_pred CC-------Ceeeee-ccCCeEEEEEECCCC-CEEEEeeCCCeEEEEECCCCCCCCeEe--cCCcccEEEEEEeCCCCcE
Q 024372 92 TG-------DEKHSF-EHKHIVRACAFSEDT-HLLLTGGFEKILRIFDLNRPDAPPREV--GNSSGSIRTVAWLHSDQTI 160 (268)
Q Consensus 92 ~~-------~~~~~~-~~~~~v~~v~~~~~~-~~l~s~~~d~~i~~~d~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~ 160 (268)
++ .....+ .|...|.+++|+|++ ++|++++.|+.|++||+++++. ...+ ..|.+.+.+++|+|++..
T Consensus 113 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~- 190 (402)
T 2aq5_A 113 DGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAA-VLTLGPDVHPDTIYSVDWSRDGAL- 190 (402)
T ss_dssp TTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEE-EEEECTTTCCSCEEEEEECTTSSC-
T ss_pred CCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCc-cEEEecCCCCCceEEEEECCCCCE-
Confidence 87 344444 488899999999998 6999999999999999986543 3344 567889999999997665
Q ss_pred EEEeeCCCeEEEEeCCCCceEEee-cCC-CC-EEEEEECCCCcEEEEe----CCCeEEEEeCCCcee-eeEEe--CCCCc
Q 024372 161 LSSCTDSGGVRLWDARSGKIVQTL-ETK-SP-VTSAEVSRDGRYITTA----DGSSVKFWDANHFGL-VKGYN--MPCNT 230 (268)
Q Consensus 161 ~~~~~~d~~i~iwd~~~~~~~~~~-~~~-~~-v~~~~~s~~g~~l~~~----~~~~v~~wd~~~~~~-~~~~~--~~~~~ 230 (268)
+++++.|+.|++||+++++.+..+ ..+ .. +.++.|+|++++++++ .++.|++||++..+. +.... .....
T Consensus 191 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v 270 (402)
T 2aq5_A 191 ICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGV 270 (402)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSC
T ss_pred EEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCce
Confidence 555667799999999999998887 433 33 7899999999999876 689999999988654 33333 34456
Q ss_pred eeeEEcCCCCCEEE-eccCCCeEEEEECCCCc
Q 024372 231 ESASLEPKLGNIFI-AGGEDMWVHVFDFHTGE 261 (268)
Q Consensus 231 ~~~~~~~~~~~~~~-~gs~d~~i~~wd~~~g~ 261 (268)
..+.+++ ++++++ +|+.|+.|++||+.+++
T Consensus 271 ~~~~~s~-~~~~l~~~g~~dg~i~i~d~~~~~ 301 (402)
T 2aq5_A 271 LLPFFDP-DTNIVYLCGKGDSSIRYFEITSEA 301 (402)
T ss_dssp EEEEEET-TTTEEEEEETTCSCEEEEEECSST
T ss_pred eEEEEcC-CCCEEEEEEcCCCeEEEEEecCCC
Confidence 6777777 577765 66789999999999887
No 92
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=6.8e-32 Score=235.47 Aligned_cols=244 Identities=26% Similarity=0.412 Sum_probs=201.2
Q ss_pred eeecEEeeecCCCe-eeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCCCc
Q 024372 6 VAVPLVCHGHSRPV-VDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFT 84 (268)
Q Consensus 6 ~~~~~~~~~h~~~v-~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~ 84 (268)
+..+..+.+|.+.| .++.| +|++|++|+.|++|++||..+++.+.++.+|.+.|.+++|+ +.++++|+.|++
T Consensus 108 ~~~~~~l~~h~~~v~~~~~~-----~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~ 180 (445)
T 2ovr_B 108 LKSPKVLKGHDDHVITCLQF-----CGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRT 180 (445)
T ss_dssp CCCCEEEECSTTSCEEEEEE-----ETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSC
T ss_pred cceeEEecccCCCcEEEEEE-----cCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCe
Confidence 34556788999976 55554 57899999999999999999999999999999999999997 568999999999
Q ss_pred EEEEeCCCCCeeeeec-cCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEE
Q 024372 85 AKLWDALTGDEKHSFE-HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSS 163 (268)
Q Consensus 85 v~iw~~~~~~~~~~~~-~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 163 (268)
|++||+.+++....+. |...|.++.|+ ++.+++|+.|+.|++||+++++. ......|...+.++.+ ++ .++++
T Consensus 181 i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~-~~~~~~~~~~v~~~~~--~~-~~l~~ 254 (445)
T 2ovr_B 181 LKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQC-LHVLMGHVAAVRCVQY--DG-RRVVS 254 (445)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCE-EEEEECCSSCEEEEEE--CS-SCEEE
T ss_pred EEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcE-EEEEcCCcccEEEEEE--CC-CEEEE
Confidence 9999999998877775 78899999985 56899999999999999986543 3455567889999998 33 45666
Q ss_pred eeCCCeEEEEeCCCCceEEeecC-CCCEEEEEECCCCcEEEE-eCCCeEEEEeCCCceeeeEEeCCCCceeeEEcCCCCC
Q 024372 164 CTDSGGVRLWDARSGKIVQTLET-KSPVTSAEVSRDGRYITT-ADGSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGN 241 (268)
Q Consensus 164 ~~~d~~i~iwd~~~~~~~~~~~~-~~~v~~~~~s~~g~~l~~-~~~~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (268)
++.|+.|++||+++++++..+.. ...+.++.+ ++.++++ +.|+.|++||+++.+++..+..+..... ++.+ +++
T Consensus 255 ~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~-~~~~-~~~ 330 (445)
T 2ovr_B 255 GAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTS-GMEL-KDN 330 (445)
T ss_dssp EETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEE-EEEE-ETT
T ss_pred EcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEE-EEEE-eCC
Confidence 77889999999999999998874 456889988 6666654 5789999999999988888876544332 2233 478
Q ss_pred EEEeccCCCeEEEEECCCCcEEeec
Q 024372 242 IFIAGGEDMWVHVFDFHTGEQIAIT 266 (268)
Q Consensus 242 ~~~~gs~d~~i~~wd~~~g~~~~~~ 266 (268)
++++|+.|+.|++||+.+++.+..+
T Consensus 331 ~l~~~~~dg~i~vwd~~~~~~~~~~ 355 (445)
T 2ovr_B 331 ILVSGNADSTVKIWDIKTGQCLQTL 355 (445)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEE
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEE
Confidence 9999999999999999999887654
No 93
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-33 Score=238.23 Aligned_cols=225 Identities=10% Similarity=0.054 Sum_probs=178.8
Q ss_pred CCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCCCcEEEEeCC---------CCCeeeee
Q 024372 29 PDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDAL---------TGDEKHSF 99 (268)
Q Consensus 29 ~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw~~~---------~~~~~~~~ 99 (268)
+++.+|++|+.|++|++||..+++.+.++. ...|.++.++|+ +++++.|+++++|+.. ++......
T Consensus 46 ~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~ 120 (343)
T 3lrv_A 46 YDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREI 120 (343)
T ss_dssp EEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEE
T ss_pred CCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEe
Confidence 578999999999999999999999888886 567888888887 8999999999999765 44433333
Q ss_pred --ccCCeEEEEEECC--CCCEEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEeeCCCeEEEEeC
Q 024372 100 --EHKHIVRACAFSE--DTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDA 175 (268)
Q Consensus 100 --~~~~~v~~v~~~~--~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~iwd~ 175 (268)
.|...|.+++|+| +++++++++.|+.|++||+++++........+...+.+++|+|++. ++++|+.||.|+|||+
T Consensus 121 ~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~-~lasg~~dg~i~iwd~ 199 (343)
T 3lrv_A 121 EVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSL-LLALYSPDGILDVYNL 199 (343)
T ss_dssp ECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSC-EEEEECTTSCEEEEES
T ss_pred ecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCC-EEEEEcCCCEEEEEEC
Confidence 3557899999999 9999999999999999999876542222244566799999998764 6777778899999999
Q ss_pred CCCceE-EeecC--CCCEEEEEECCCCcEEEEeCCCeEEEEeCCCceeeeEEeC---CCC---ceeeEEcCCCCCEEEec
Q 024372 176 RSGKIV-QTLET--KSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGYNM---PCN---TESASLEPKLGNIFIAG 246 (268)
Q Consensus 176 ~~~~~~-~~~~~--~~~v~~~~~s~~g~~l~~~~~~~v~~wd~~~~~~~~~~~~---~~~---~~~~~~~~~~~~~~~~g 246 (268)
++++.+ ..+.. ..+|.+++|+|+|.+|+++.++.|++||+++.+.+..+.. +.. ...++++| ++++|++|
T Consensus 200 ~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~l~~~ 278 (343)
T 3lrv_A 200 SSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDD-SGKNMIAY 278 (343)
T ss_dssp SCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECT-TSSEEEEE
T ss_pred CCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCCeEEEEEcCCCCcceeecccccccccccceEEEECC-CCCEEEEe
Confidence 999887 66764 5679999999999999877666999999998766543331 111 12477777 69999998
Q ss_pred cC-CCeEEEEECCCC
Q 024372 247 GE-DMWVHVFDFHTG 260 (268)
Q Consensus 247 s~-d~~i~~wd~~~g 260 (268)
+. |+.|++|++.++
T Consensus 279 s~~d~~i~v~~~~~~ 293 (343)
T 3lrv_A 279 SNESNSLTIYKFDKK 293 (343)
T ss_dssp ETTTTEEEEEEECTT
T ss_pred cCCCCcEEEEEEccc
Confidence 87 999999998654
No 94
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1.1e-32 Score=239.58 Aligned_cols=243 Identities=14% Similarity=0.171 Sum_probs=188.5
Q ss_pred ecEEeeecC------------CCeeeEEEecCCCCC--cEEEEEeCCCCeEEeeCCCCCeE-------------------
Q 024372 8 VPLVCHGHS------------RPVVDLFYSPITPDG--FFLVSASKDSSPMLRNGETGDWI------------------- 54 (268)
Q Consensus 8 ~~~~~~~h~------------~~v~~~~f~~~~~dg--~~l~s~s~d~~i~iw~~~~~~~~------------------- 54 (268)
....+.+|. ++|.+++|+| ++ .+|++++.|++|++|+..+++..
T Consensus 73 ~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~---~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~ 149 (447)
T 3dw8_B 73 VYSTFQSHEPEFDYLKSLEIEEKINKIRWLP---QKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTV 149 (447)
T ss_dssp EEEEEECCCCEEEGGGTEEECCCCCEEEECC---CCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCC
T ss_pred EecccccccccccccccccccCceEEEEEcC---CCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccc
Confidence 344567898 8999999996 55 78999999999999998764432
Q ss_pred --------------------EE-eeCccCcEEEEEecCCCcEEEEeeCCCcEEEEeCCC-CCeeeee--------ccCCe
Q 024372 55 --------------------GT-FEGHKGAVWSCCLDANALFSASGSADFTAKLWDALT-GDEKHSF--------EHKHI 104 (268)
Q Consensus 55 --------------------~~-~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw~~~~-~~~~~~~--------~~~~~ 104 (268)
.. +.+|...|.+++|+|++.++++| .|++|++||+.+ ......+ .|...
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 228 (447)
T 3dw8_B 150 TTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEV 228 (447)
T ss_dssp CSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCC
T ss_pred cceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcc
Confidence 12 36899999999999999999998 799999999984 3343322 47788
Q ss_pred EEEEEECCCC-CEEEEeeCCCeEEEEECCCCCCC---CeEecCCcc------------cEEEEEEeCCCCcEEEEeeCCC
Q 024372 105 VRACAFSEDT-HLLLTGGFEKILRIFDLNRPDAP---PREVGNSSG------------SIRTVAWLHSDQTILSSCTDSG 168 (268)
Q Consensus 105 v~~v~~~~~~-~~l~s~~~d~~i~~~d~~~~~~~---~~~~~~~~~------------~v~~~~~~~~~~~~~~~~~~d~ 168 (268)
|.+++|+|++ ++|++|+.|+.|++||++.+... ...+..+.. .+.+++|+|++. +++++++ +
T Consensus 229 v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~~~-~ 306 (447)
T 3dw8_B 229 ITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGR-YMMTRDY-L 306 (447)
T ss_dssp EEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSS-EEEEEES-S
T ss_pred eEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCC-EEEEeeC-C
Confidence 9999999998 99999999999999999876531 345555554 899999999765 4556677 9
Q ss_pred eEEEEeCCC-CceEEeecCCCC----------------EEEEEECCCCcEEEEe-CCCeEEEEeCCCceeeeEE------
Q 024372 169 GVRLWDARS-GKIVQTLETKSP----------------VTSAEVSRDGRYITTA-DGSSVKFWDANHFGLVKGY------ 224 (268)
Q Consensus 169 ~i~iwd~~~-~~~~~~~~~~~~----------------v~~~~~s~~g~~l~~~-~~~~v~~wd~~~~~~~~~~------ 224 (268)
.|+|||+++ ++++..+..+.. +..++|+|++++|+++ .|+.|++||++..+.+...
T Consensus 307 ~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~ 386 (447)
T 3dw8_B 307 SVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENN 386 (447)
T ss_dssp EEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTTC
T ss_pred eEEEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeeeccccc
Confidence 999999997 888777765543 2348999999988764 6899999999887655311
Q ss_pred ---------------------------eCCCCceeeEEcCCCCCEEEeccCCCeEEEEECC
Q 024372 225 ---------------------------NMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFH 258 (268)
Q Consensus 225 ---------------------------~~~~~~~~~~~~~~~~~~~~~gs~d~~i~~wd~~ 258 (268)
.....+..++++| ++.+|++|+.|+ +++|..+
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p-~~~~la~~~~~~-~~~~~~~ 445 (447)
T 3dw8_B 387 KPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHP-KENIIAVATTNN-LYIFQDK 445 (447)
T ss_dssp CTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECS-SSSEEEEECSSC-EEEEECC
T ss_pred ccccccCCccccccCCcccccccccccccCCceeEEEECC-CCCEEEEEecce-eeeeccc
Confidence 1122344577777 699999998887 8888754
No 95
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=2.4e-32 Score=237.88 Aligned_cols=241 Identities=18% Similarity=0.300 Sum_probs=192.0
Q ss_pred eeeecEEeeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCCCc
Q 024372 5 KVAVPLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFT 84 (268)
Q Consensus 5 ~~~~~~~~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~ 84 (268)
.......+.+|.++|.+++| ++++|++|+.|++|++||..+++.+.++.+|.+.|.+++|++ .++++|+.|++
T Consensus 162 ~~~~~~~~~~h~~~v~~l~~-----~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~ 234 (435)
T 1p22_A 162 TLECKRILTGHTGSVLCLQY-----DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNN--GMMVTCSKDRS 234 (435)
T ss_dssp SCCEEEEECCCSSCEEEEEC-----CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECCT--TEEEEEETTSC
T ss_pred CCeEEEEEcCCCCcEEEEEE-----CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEcC--CEEEEeeCCCc
Confidence 33445567799999999998 567999999999999999999999999999999999999974 58899999999
Q ss_pred EEEEeCCCCCee---e-eeccCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcE
Q 024372 85 AKLWDALTGDEK---H-SFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTI 160 (268)
Q Consensus 85 v~iw~~~~~~~~---~-~~~~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 160 (268)
|++||+.++... . ...|...|.+++| +++.+++|+.|+.|++||+++++. ...+..|...+.++.+. +.+
T Consensus 235 i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~-~~~~~~~~~~v~~~~~~---~~~ 308 (435)
T 1p22_A 235 IAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEF-VRTLNGHKRGIACLQYR---DRL 308 (435)
T ss_dssp EEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCE-EEEEECCSSCEEEEEEE---TTE
T ss_pred EEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcE-EEEEcCCCCcEEEEEeC---CCE
Confidence 999999887654 2 2347889999998 788999999999999999987643 44555678899999884 346
Q ss_pred EEEeeCCCeEEEEeCCCCceEEeecC-CCCEEEEEECCCCcEEEE-eCCCeEEEEeCCCce---------eeeEEeCCCC
Q 024372 161 LSSCTDSGGVRLWDARSGKIVQTLET-KSPVTSAEVSRDGRYITT-ADGSSVKFWDANHFG---------LVKGYNMPCN 229 (268)
Q Consensus 161 ~~~~~~d~~i~iwd~~~~~~~~~~~~-~~~v~~~~~s~~g~~l~~-~~~~~v~~wd~~~~~---------~~~~~~~~~~ 229 (268)
+++++.||.|++||+++++++.++.. ...+.++++ ++.++++ +.|+.|++||++... ++..+..+..
T Consensus 309 l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~ 386 (435)
T 1p22_A 309 VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSG 386 (435)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSS
T ss_pred EEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCC
Confidence 77778889999999999999998875 456888888 6666655 578999999986654 5666655443
Q ss_pred -ceeeEEcCCCCCEEEeccCCCeEEEEECCCCcEE
Q 024372 230 -TESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQI 263 (268)
Q Consensus 230 -~~~~~~~~~~~~~~~~gs~d~~i~~wd~~~g~~~ 263 (268)
+..+.+ ++.+|++|+.|+.|++||+.++...
T Consensus 387 ~v~~l~~---~~~~l~s~s~Dg~i~iwd~~~~~~~ 418 (435)
T 1p22_A 387 RVFRLQF---DEFQIVSSSHDDTILIWDFLNDPAA 418 (435)
T ss_dssp CCCCEEE---CSSCEEECCSSSEEEEEC-------
T ss_pred CeEEEEe---CCCEEEEEeCCCEEEEEECCCCCCc
Confidence 444555 5788999999999999999876543
No 96
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=8.8e-32 Score=234.74 Aligned_cols=242 Identities=23% Similarity=0.354 Sum_probs=199.2
Q ss_pred eecEEeeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCCCcEE
Q 024372 7 AVPLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAK 86 (268)
Q Consensus 7 ~~~~~~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~ 86 (268)
.....+.+|.++|.+++|+ +.+|++|+.|++|++||..+++.+.++.+|...|.+++++ +.++++|+.|++|+
T Consensus 150 ~~~~~~~~h~~~v~~~~~~-----~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~ 222 (445)
T 2ovr_B 150 KCLRTLVGHTGGVWSSQMR-----DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLR 222 (445)
T ss_dssp CEEEECCCCSSCEEEEEEE-----TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEE
T ss_pred cEEEEEcCCCCCEEEEEec-----CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEE
Confidence 3445567899999999996 3599999999999999999999999999999999999995 56799999999999
Q ss_pred EEeCCCCCeeeeec-cCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEee
Q 024372 87 LWDALTGDEKHSFE-HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCT 165 (268)
Q Consensus 87 iw~~~~~~~~~~~~-~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 165 (268)
+||+.+++....+. |...|.++.| +++.+++|+.|+.|++||+++++ .......|.+.+.++.+ + +..+++++
T Consensus 223 ~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~v~~~~~--~-~~~l~~~~ 296 (445)
T 2ovr_B 223 VWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETET-CLHTLQGHTNRVYSLQF--D-GIHVVSGS 296 (445)
T ss_dssp EEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTE-EEEEECCCSSCEEEEEE--C-SSEEEEEE
T ss_pred EEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCc-EeEEecCCCCceEEEEE--C-CCEEEEEe
Confidence 99999988877764 7889999998 67889999999999999987654 23445567789999998 3 34566777
Q ss_pred CCCeEEEEeCCCCceEEeecCC-CCEEEEEECCCCcEEE-EeCCCeEEEEeCCCceeeeEEeCC---C-CceeeEEcCCC
Q 024372 166 DSGGVRLWDARSGKIVQTLETK-SPVTSAEVSRDGRYIT-TADGSSVKFWDANHFGLVKGYNMP---C-NTESASLEPKL 239 (268)
Q Consensus 166 ~d~~i~iwd~~~~~~~~~~~~~-~~v~~~~~s~~g~~l~-~~~~~~v~~wd~~~~~~~~~~~~~---~-~~~~~~~~~~~ 239 (268)
.|+.|++||+++++++..+..+ ..+.++.++ +++++ ++.|+.|++||+++.+.+..+..+ . .+..+.+ +
T Consensus 297 ~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~---~ 371 (445)
T 2ovr_B 297 LDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQF---N 371 (445)
T ss_dssp TTSCEEEEETTTCCEEEEECCCCSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEE---C
T ss_pred CCCeEEEEECCCCCEEEEEcCCcccEEEEEEe--CCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEE---C
Confidence 8899999999999999988754 457666664 45655 567899999999998888888652 2 2334444 3
Q ss_pred CCEEEeccCCCeEEEEECCCCcEEeec
Q 024372 240 GNIFIAGGEDMWVHVFDFHTGEQIAIT 266 (268)
Q Consensus 240 ~~~~~~gs~d~~i~~wd~~~g~~~~~~ 266 (268)
++++++|+.|+.|++||+.+|+.+..+
T Consensus 372 ~~~l~s~~~dg~v~iwd~~~~~~~~~~ 398 (445)
T 2ovr_B 372 KNFVITSSDDGTVKLWDLKTGEFIRNL 398 (445)
T ss_dssp SSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCceeeee
Confidence 789999999999999999999987654
No 97
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=1.8e-31 Score=228.39 Aligned_cols=247 Identities=15% Similarity=0.120 Sum_probs=205.0
Q ss_pred EeeecCCCeeeEEEecCCCCCcEE-EEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEE-EEeeCCCcEEEE
Q 024372 11 VCHGHSRPVVDLFYSPITPDGFFL-VSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFS-ASGSADFTAKLW 88 (268)
Q Consensus 11 ~~~~h~~~v~~~~f~~~~~dg~~l-~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l-~s~s~D~~v~iw 88 (268)
.+.+| ..+.+++|+| +|.+| ++++.|++|++||..+++.+..+..|. .+..++|+|++.++ ++++.|+.|++|
T Consensus 27 ~~~~~-~~~~~~~~s~---dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~ 101 (391)
T 1l0q_A 27 TIPVG-SNPMGAVISP---DGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVI 101 (391)
T ss_dssp EEECS-SSEEEEEECT---TSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred EeecC-CCcceEEECC---CCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEE
Confidence 34445 4589999985 88776 677899999999999999998888665 89999999999877 466678999999
Q ss_pred eCCCCCeeeeeccCCeEEEEEECCCCCEE-EEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEeeCC
Q 024372 89 DALTGDEKHSFEHKHIVRACAFSEDTHLL-LTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDS 167 (268)
Q Consensus 89 ~~~~~~~~~~~~~~~~v~~v~~~~~~~~l-~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d 167 (268)
|+.+++....+.+...+.+++|+|+++.+ ++++.++.|++||+.+++.. .....+ ..+..++|+|++..+++++..+
T Consensus 102 d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~-~~~~~~-~~~~~~~~~~dg~~l~~~~~~~ 179 (391)
T 1l0q_A 102 DTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVI-NTVSVG-RSPKGIAVTPDGTKVYVANFDS 179 (391)
T ss_dssp ETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE-EEEECC-SSEEEEEECTTSSEEEEEETTT
T ss_pred ECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEE-EEEecC-CCcceEEECCCCCEEEEEeCCC
Confidence 99999988888877788999999999977 68888999999998765432 233333 4568899999888887788888
Q ss_pred CeEEEEeCCCCceEEeecCCCCEEEEEECCCCcEEEEe----CCCeEEEEeCCCceeeeEEeCCCCceeeEEcCCCCCEE
Q 024372 168 GGVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYITTA----DGSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIF 243 (268)
Q Consensus 168 ~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~----~~~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (268)
+.|++||+++++++..+.....+.+++++|+|++++++ .++.|++||+++.+.+..+..+..+..+.+.+ +++++
T Consensus 180 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~-dg~~l 258 (391)
T 1l0q_A 180 MSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTP-DGKKV 258 (391)
T ss_dssp TEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCSSEEEEEECT-TSSEE
T ss_pred CEEEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCCCccEEEEcc-CCCEE
Confidence 99999999999999888877789999999999877643 47899999999988888887766666777887 47655
Q ss_pred -EeccCCCeEEEEECCCCcEEee
Q 024372 244 -IAGGEDMWVHVFDFHTGEQIAI 265 (268)
Q Consensus 244 -~~gs~d~~i~~wd~~~g~~~~~ 265 (268)
++++.|+.|++||+.+++.+..
T Consensus 259 ~~s~~~d~~v~v~d~~~~~~~~~ 281 (391)
T 1l0q_A 259 YVALSFXNTVSVIDTATNTITAT 281 (391)
T ss_dssp EEEETTTTEEEEEETTTTEEEEE
T ss_pred EEEcCCCCEEEEEECCCCcEEEE
Confidence 6788999999999999988765
No 98
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=3.6e-32 Score=253.17 Aligned_cols=251 Identities=20% Similarity=0.314 Sum_probs=208.2
Q ss_pred eecEEeeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCCCcEE
Q 024372 7 AVPLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAK 86 (268)
Q Consensus 7 ~~~~~~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~ 86 (268)
.....+.+|..+|.+++|+| +|++|++|+.|++|++|+..+++.+.++.+|.+.|.+++|+|++.++++++.|++|+
T Consensus 46 ~~~~~~~~~~~~v~~~~~s~---~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~ 122 (814)
T 3mkq_A 46 VEVRSIQVTETPVRAGKFIA---RKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVK 122 (814)
T ss_dssp EEEEEEECCSSCEEEEEEEG---GGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEE
T ss_pred ceEEEEecCCCcEEEEEEeC---CCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEE
Confidence 34455678999999999996 899999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCC-Ceeeee-ccCCeEEEEEECC-CCCEEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeC--CCCcEE
Q 024372 87 LWDALTG-DEKHSF-EHKHIVRACAFSE-DTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLH--SDQTIL 161 (268)
Q Consensus 87 iw~~~~~-~~~~~~-~~~~~v~~v~~~~-~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~ 161 (268)
+||+.++ .....+ .|...|.+++|+| +++.+++++.|+.|++||++.+........++...+.+++|+| ++ .++
T Consensus 123 vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l 201 (814)
T 3mkq_A 123 LWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDK-PYM 201 (814)
T ss_dssp EEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTC-CEE
T ss_pred EEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCC-CEE
Confidence 9999876 344444 4788999999999 8899999999999999999776554444455557899999988 54 456
Q ss_pred EEeeCCCeEEEEeCCCCceEEeecC-CCCEEEEEECCCCcEEEE-eCCCeEEEEeCCCceeeeEEeCCC-CceeeEEcCC
Q 024372 162 SSCTDSGGVRLWDARSGKIVQTLET-KSPVTSAEVSRDGRYITT-ADGSSVKFWDANHFGLVKGYNMPC-NTESASLEPK 238 (268)
Q Consensus 162 ~~~~~d~~i~iwd~~~~~~~~~~~~-~~~v~~~~~s~~g~~l~~-~~~~~v~~wd~~~~~~~~~~~~~~-~~~~~~~~~~ 238 (268)
++++.||.|++||+++++++..+.. ...+.+++|+|++.++++ +.|+.|++||+.+++.+..+..+. ....++++|+
T Consensus 202 ~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~ 281 (814)
T 3mkq_A 202 ITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPT 281 (814)
T ss_dssp EEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTT
T ss_pred EEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccC
Confidence 6777889999999999999988874 467999999999988776 468999999999988888877654 4566777774
Q ss_pred CCCEEEeccCCCeEEEEECCCCc
Q 024372 239 LGNIFIAGGEDMWVHVFDFHTGE 261 (268)
Q Consensus 239 ~~~~~~~gs~d~~i~~wd~~~g~ 261 (268)
....+++++.|+.+.+|++..+.
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~ 304 (814)
T 3mkq_A 282 GRKNYIASGFDNGFTVLSLGNDE 304 (814)
T ss_dssp CGGGEEEEEETTEEEEEECSCCS
T ss_pred CCceEEEEEeCCCEEEEEcCCCC
Confidence 33444555556678899976443
No 99
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1e-31 Score=225.48 Aligned_cols=238 Identities=13% Similarity=0.060 Sum_probs=195.8
Q ss_pred cEEeeecCCCeeeEEEecCCCCCc-EEEEEeCCCCeEEeeC-CCCCeEEEeeC--ccCcEEEEEecCCCcEEEEeeCCCc
Q 024372 9 PLVCHGHSRPVVDLFYSPITPDGF-FLVSASKDSSPMLRNG-ETGDWIGTFEG--HKGAVWSCCLDANALFSASGSADFT 84 (268)
Q Consensus 9 ~~~~~~h~~~v~~~~f~~~~~dg~-~l~s~s~d~~i~iw~~-~~~~~~~~~~~--h~~~V~~~~~~~~~~~l~s~s~D~~ 84 (268)
+..+.+|..+|.+++|+| +|+ +|++|+.|++|++|+. .+++. ..+.+ |...|.+++|+| +.++++++.|+.
T Consensus 49 ~~~~~~~~~~v~~~~~~~---~~~~~l~~~~~dg~i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~ 123 (342)
T 1yfq_A 49 LLQSLRYKHPLLCCNFID---NTDLQIYVGTVQGEILKVDLIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGL 123 (342)
T ss_dssp EEEEEECSSCEEEEEEEE---SSSEEEEEEETTSCEEEECSSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSE
T ss_pred ceeeeecCCceEEEEECC---CCCcEEEEEcCCCeEEEEEeccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCe
Confidence 455568999999999996 799 9999999999999999 87765 67888 999999999999 999999999999
Q ss_pred EEEEeCCC---------CCeeeeeccCCeEEEEEECCCCCEEEEeeCCCeEEEEECCC-CCCCC-eEecCCcccEEEEEE
Q 024372 85 AKLWDALT---------GDEKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNR-PDAPP-REVGNSSGSIRTVAW 153 (268)
Q Consensus 85 v~iw~~~~---------~~~~~~~~~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~-~~~~~-~~~~~~~~~v~~~~~ 153 (268)
|++||+.+ +++...+.+...+.+++|+|++ +++++.|+.|++||++. ..... .....+...+.+++|
T Consensus 124 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~ 201 (342)
T 1yfq_A 124 IEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVAL 201 (342)
T ss_dssp EEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEE
T ss_pred EEEEcccccccccccccCCeeeEEeeCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEE
Confidence 99999987 7777777788899999999887 88999999999999986 44322 234456778999999
Q ss_pred eC-CCCcEEEEeeCCCeEEEEeCCCC------ceEEeecCC----------CCEEEEEECCCCcEEEE-eCCCeEEEEeC
Q 024372 154 LH-SDQTILSSCTDSGGVRLWDARSG------KIVQTLETK----------SPVTSAEVSRDGRYITT-ADGSSVKFWDA 215 (268)
Q Consensus 154 ~~-~~~~~~~~~~~d~~i~iwd~~~~------~~~~~~~~~----------~~v~~~~~s~~g~~l~~-~~~~~v~~wd~ 215 (268)
+| ++. ++++++.||.|++||++.. +....+..+ ..+.+++|+|++++|++ +.|+.|++||+
T Consensus 202 ~~~~~~-~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~ 280 (342)
T 1yfq_A 202 LPKEQE-GYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNL 280 (342)
T ss_dssp CSGGGC-EEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEET
T ss_pred CCCCCC-EEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcC
Confidence 98 665 5566677899999999876 666666543 27999999999988765 56899999999
Q ss_pred CCceeeeEEeCC-CCceeeEEcCCCCCEEEeccCCCe-EEEEE
Q 024372 216 NHFGLVKGYNMP-CNTESASLEPKLGNIFIAGGEDMW-VHVFD 256 (268)
Q Consensus 216 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~gs~d~~-i~~wd 256 (268)
++.+++..+..+ ........ + ++++|++|+.|+. .+.|.
T Consensus 281 ~~~~~~~~~~~~h~~~v~~~~-~-~~~~l~s~s~Dg~~~~~~~ 321 (342)
T 1yfq_A 281 QTRKKIKNFAKFNEDSVVKIA-C-SDNILCLATSDDTFKTNAA 321 (342)
T ss_dssp TTTEEEEECCCCSSSEEEEEE-E-CSSEEEEEEECTHHHHCSS
T ss_pred ccHhHhhhhhcccCCCceEec-C-CCCeEEEEecCCccccccc
Confidence 999888887765 44333222 4 7999999999998 44444
No 100
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.7e-31 Score=232.22 Aligned_cols=239 Identities=10% Similarity=0.069 Sum_probs=193.4
Q ss_pred CCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCC---eEEEeeCc--------------------------------
Q 024372 16 SRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGD---WIGTFEGH-------------------------------- 60 (268)
Q Consensus 16 ~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~---~~~~~~~h-------------------------------- 60 (268)
..|+.+++|+| +|++|+++ .++.|++||..+|+ .+..+..|
T Consensus 4 ~~p~~~v~~s~---dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (450)
T 2vdu_B 4 IHPLQNLLTSR---DGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSN 79 (450)
T ss_dssp ECCCCEEEECS---SSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-------------------------------
T ss_pred cccEEEEEecC---CCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccC
Confidence 45889999985 89866655 67899999999998 77766643
Q ss_pred ----------------------cCcEEEEEecCCCcEE-EEeeCCCcEEEEeCC--CCCeeeee---ccCCeEEEEEECC
Q 024372 61 ----------------------KGAVWSCCLDANALFS-ASGSADFTAKLWDAL--TGDEKHSF---EHKHIVRACAFSE 112 (268)
Q Consensus 61 ----------------------~~~V~~~~~~~~~~~l-~s~s~D~~v~iw~~~--~~~~~~~~---~~~~~v~~v~~~~ 112 (268)
.+.|.+++|+|++.+| ++++.|++|++||+. ++.....+ .+...|.+++|+|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp 159 (450)
T 2vdu_B 80 KGDSIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAE 159 (450)
T ss_dssp --------------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECT
T ss_pred cCccccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcC
Confidence 3379999999999986 899999999999998 77777766 4678899999999
Q ss_pred CCCEEEEeeCCCeEEEEECCCCCCCC---eEecCCcccEEEEEEeCC--CCcEEEEeeCCCeEEEEeCCCCceEEeec--
Q 024372 113 DTHLLLTGGFEKILRIFDLNRPDAPP---REVGNSSGSIRTVAWLHS--DQTILSSCTDSGGVRLWDARSGKIVQTLE-- 185 (268)
Q Consensus 113 ~~~~l~s~~~d~~i~~~d~~~~~~~~---~~~~~~~~~v~~~~~~~~--~~~~~~~~~~d~~i~iwd~~~~~~~~~~~-- 185 (268)
+++.|++|+.++.+++|++....... .....|.+.+.+++|+|+ ++.++++++.|+.|++||+++++++..+.
T Consensus 160 ~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~ 239 (450)
T 2vdu_B 160 DDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFG 239 (450)
T ss_dssp TSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCC
T ss_pred CCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecC
Confidence 99999999999999999987654321 234457789999999997 24466677788999999999999887743
Q ss_pred CCCCEEEEEECCCCcEEEE-eCCCeEEEEeCCCceeeeEEeCC--------------------------CCceeeEEcCC
Q 024372 186 TKSPVTSAEVSRDGRYITT-ADGSSVKFWDANHFGLVKGYNMP--------------------------CNTESASLEPK 238 (268)
Q Consensus 186 ~~~~v~~~~~s~~g~~l~~-~~~~~v~~wd~~~~~~~~~~~~~--------------------------~~~~~~~~~~~ 238 (268)
+...+.+++|+ ++++|++ +.|+.|++||+++++++..+... .....+.+.+
T Consensus 240 h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~- 317 (450)
T 2vdu_B 240 HKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSK- 317 (450)
T ss_dssp CSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECS-
T ss_pred CCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeC-
Confidence 55679999999 9988876 57899999999998888777532 1234556666
Q ss_pred CCCEEEecc-CCCeEEEEEC--CCC
Q 024372 239 LGNIFIAGG-EDMWVHVFDF--HTG 260 (268)
Q Consensus 239 ~~~~~~~gs-~d~~i~~wd~--~~g 260 (268)
+++++++++ .|+.|++||+ .++
T Consensus 318 ~~~~l~~~~~~d~~i~iw~~~~~~~ 342 (450)
T 2vdu_B 318 NLPFVAFFVEATKCIIILEMSEKQK 342 (450)
T ss_dssp SSSEEEEEETTCSEEEEEEECSSST
T ss_pred CCCEEEEEECCCCeEEEEEeccCCC
Confidence 688888887 8999999999 555
No 101
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=2.3e-31 Score=226.09 Aligned_cols=242 Identities=13% Similarity=0.171 Sum_probs=183.5
Q ss_pred eeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEE-EEeeCCCcEEEEeC
Q 024372 12 CHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFS-ASGSADFTAKLWDA 90 (268)
Q Consensus 12 ~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l-~s~s~D~~v~iw~~ 90 (268)
+.+|.++|++++|+| ||++||+|+.|+ +++|+..+++.+..... ..+..+++.+++..+ ++++.|++|++||.
T Consensus 15 ~~~h~~~V~~v~fs~---dg~~la~g~~~~-~~iw~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~ 88 (355)
T 3vu4_A 15 ENHVSNPVTDYEFNQ---DQSCLILSTLKS-FEIYNVHPVAHIMSQEM--RHLSKVRMLHRTNYVAFVTGVKEVVHIWDD 88 (355)
T ss_dssp ----CCCCCEEEECT---TSSEEEEECSSE-EEEEEETTEEEEEEEEC--SCCCEEEECTTSSEEEEECSSTTEEEEEET
T ss_pred cccCCCceEEEEECC---CCCEEEEEcCCE-EEEEecCCcceeeeeec--CCeEEEEEcCCCCEEEEEECCccEEEEEEC
Confidence 468999999999985 999999998775 78999988876654432 347778888877766 57888999999999
Q ss_pred CCCCeeeeeccCCeEEEEEECCCC-----------------------------------CEEEE--eeCCCeEEEEECCC
Q 024372 91 LTGDEKHSFEHKHIVRACAFSEDT-----------------------------------HLLLT--GGFEKILRIFDLNR 133 (268)
Q Consensus 91 ~~~~~~~~~~~~~~v~~v~~~~~~-----------------------------------~~l~s--~~~d~~i~~~d~~~ 133 (268)
.+++.+..+.+...|.++.++++. ..++. |+.|+.|++||++.
T Consensus 89 ~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~ 168 (355)
T 3vu4_A 89 VKKQDVSRIKVDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHITKLQS 168 (355)
T ss_dssp TTTEEEEEEECSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEEEEECCC
T ss_pred CCCcEEEEEECCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEEEEECCC
Confidence 999998888888888888887653 23333 57888899999875
Q ss_pred CCC--------------C-CeEecCCcccEEEEEEeCCCCcEEEEeeCCCe-EEEEeCCCCceEEeec---CCCCEEEEE
Q 024372 134 PDA--------------P-PREVGNSSGSIRTVAWLHSDQTILSSCTDSGG-VRLWDARSGKIVQTLE---TKSPVTSAE 194 (268)
Q Consensus 134 ~~~--------------~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~-i~iwd~~~~~~~~~~~---~~~~v~~~~ 194 (268)
+.. + ...+..|.+.|.+++|+|++ .++++++.|++ |+|||+++++++.++. +...+.+++
T Consensus 169 ~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g-~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~ 247 (355)
T 3vu4_A 169 SGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKS-DMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMK 247 (355)
T ss_dssp ------------------CCEEECCCSSCEEEEEECTTS-SEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEE
T ss_pred CCccccccccccccccCcccEEEEccCCceEEEEECCCC-CEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEE
Confidence 430 1 45667789999999999866 46777788898 9999999999999987 567799999
Q ss_pred ECCCCcEEEE-eCCCeEEEEeCCCceeee--------------------EEeCCC----CceeeEEcCCCCCEEEeccCC
Q 024372 195 VSRDGRYITT-ADGSSVKFWDANHFGLVK--------------------GYNMPC----NTESASLEPKLGNIFIAGGED 249 (268)
Q Consensus 195 ~s~~g~~l~~-~~~~~v~~wd~~~~~~~~--------------------~~~~~~----~~~~~~~~~~~~~~~~~gs~d 249 (268)
|+|+|++|++ +.|+.|++||++.....+ .+..+. ....+++.+ +++++++++.|
T Consensus 248 ~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~-d~~~l~~~~~d 326 (355)
T 3vu4_A 248 WSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWIS-ESSLVVVWPHT 326 (355)
T ss_dssp ECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESS-SSEEEEEETTT
T ss_pred ECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeC-CCCEEEEEeCC
Confidence 9999998876 578999999996542111 111111 113455665 68999999999
Q ss_pred CeEEEEECCCCc
Q 024372 250 MWVHVFDFHTGE 261 (268)
Q Consensus 250 ~~i~~wd~~~g~ 261 (268)
+.+++|++..++
T Consensus 327 g~~~~~~~~~~~ 338 (355)
T 3vu4_A 327 RMIETFKVVFDD 338 (355)
T ss_dssp TEEEEEEEEEET
T ss_pred CeEEEEEEEcCC
Confidence 999999986544
No 102
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.6e-33 Score=261.68 Aligned_cols=250 Identities=15% Similarity=0.110 Sum_probs=192.1
Q ss_pred eeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeE--EEe----e-----CccCcEEEEEecCCCcEEEEee
Q 024372 12 CHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWI--GTF----E-----GHKGAVWSCCLDANALFSASGS 80 (268)
Q Consensus 12 ~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~--~~~----~-----~h~~~V~~~~~~~~~~~l~s~s 80 (268)
+.||...+.+++|+ |+|++||+|+.|++|++||..++++. ..+ . +|...|.+++|+|++++||+|+
T Consensus 431 l~G~~~~v~sv~~s---pdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs 507 (902)
T 2oaj_A 431 LKGGVRTKRQKLPA---EYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSI 507 (902)
T ss_dssp CCCSBCCCCCCCCC---SEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEE
T ss_pred ccCCcCCCCccccc---ccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEe
Confidence 45666677777776 49999999999999999999887532 111 2 8999999999999999999999
Q ss_pred CCCcEEEEeCCCCC---------------------------------------------eeeeec-cCCeEEEEEECCCC
Q 024372 81 ADFTAKLWDALTGD---------------------------------------------EKHSFE-HKHIVRACAFSEDT 114 (268)
Q Consensus 81 ~D~~v~iw~~~~~~---------------------------------------------~~~~~~-~~~~v~~v~~~~~~ 114 (268)
.|++|+||++.+++ +...+. |...|.+++|+|+|
T Consensus 508 ~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG 587 (902)
T 2oaj_A 508 ETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG 587 (902)
T ss_dssp TTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS
T ss_pred cCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc
Confidence 99999999987652 233343 88899999999999
Q ss_pred CEEEEeeCCCeEEEEECCCCCCCC----eEec-CCcccEEEEEEe-----CCC--CcEEEEeeCCCeEEEEeC---CCCc
Q 024372 115 HLLLTGGFEKILRIFDLNRPDAPP----REVG-NSSGSIRTVAWL-----HSD--QTILSSCTDSGGVRLWDA---RSGK 179 (268)
Q Consensus 115 ~~l~s~~~d~~i~~~d~~~~~~~~----~~~~-~~~~~v~~~~~~-----~~~--~~~~~~~~~d~~i~iwd~---~~~~ 179 (268)
+||+|+.|++|++||++.+.... +... .|.+.|++++|+ |++ +..+++++.|++|++||+ .+|+
T Consensus 588 -~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~ 666 (902)
T 2oaj_A 588 -FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKILPASGGK 666 (902)
T ss_dssp -EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEECGGGC
T ss_pred -EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEEecCCCCc
Confidence 99999999999999987543211 1222 677889999999 876 356778889999999999 7888
Q ss_pred eEEeecC------CCCEEEEE-EC----------------------CCCcEEEEeCCCeEEEEeCCCceeeeEEeCCC-C
Q 024372 180 IVQTLET------KSPVTSAE-VS----------------------RDGRYITTADGSSVKFWDANHFGLVKGYNMPC-N 229 (268)
Q Consensus 180 ~~~~~~~------~~~v~~~~-~s----------------------~~g~~l~~~~~~~v~~wd~~~~~~~~~~~~~~-~ 229 (268)
++.++.. ..++..++ |+ +++.+|+++ +..||+|++.+.++.+....+. .
T Consensus 667 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~l~~~-~~~ir~~~~~~~k~~~k~~~~~~~ 745 (902)
T 2oaj_A 667 FDVQLMDITNVTSKGPIHKIDAFSKETKSSCLATIPKMQNLSKGLCIPGIVLITG-FDDIRLITLGKSKSTHKGFKYPLA 745 (902)
T ss_dssp EEEEEEEEEECCSSCCCCEEEEEETTTCCBCBCBHHHHHGGGGTCCCCEEEEEEC-SSEEEEECTTCCCEEEEECSSCEE
T ss_pred EEEEecCceecCCCCceEEEEeEecCCCCcccCCHHHHhccCCCCCCCeEEEEEe-ccceEEEeCccccceeeEccccee
Confidence 7766643 34566666 54 566666666 6699999999888776553222 2
Q ss_pred ceee--EE------cCCCCCEEEeccCCCeEEEEECCCCcEEeec
Q 024372 230 TESA--SL------EPKLGNIFIAGGEDMWVHVFDFHTGEQIAIT 266 (268)
Q Consensus 230 ~~~~--~~------~~~~~~~~~~gs~d~~i~~wd~~~g~~~~~~ 266 (268)
..++ .. ....+..|++++.|+.|++|++.+++++...
T Consensus 746 ~~~v~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~s~p~l~~~~~~ 790 (902)
T 2oaj_A 746 ATGLSYISTVEKNNDRKNLTVIITLEINGHLRVFTIPDFKEQMSE 790 (902)
T ss_dssp EEEEEEEEEECSSSCEEEEEEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred eeEEEEEEeccccccccCceEEEEEeCCCcEEEEECcchHHHhhc
Confidence 2222 11 2335789999999999999999999988764
No 103
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3e-31 Score=231.99 Aligned_cols=239 Identities=11% Similarity=0.105 Sum_probs=193.4
Q ss_pred eecCCCeeeEEEecCCCCCcEE-EEEeCCCCeEEeeCC--CCCeEEEee--CccCcEEEEEecCCCcEEEEeeCCCcEEE
Q 024372 13 HGHSRPVVDLFYSPITPDGFFL-VSASKDSSPMLRNGE--TGDWIGTFE--GHKGAVWSCCLDANALFSASGSADFTAKL 87 (268)
Q Consensus 13 ~~h~~~v~~~~f~~~~~dg~~l-~s~s~d~~i~iw~~~--~~~~~~~~~--~h~~~V~~~~~~~~~~~l~s~s~D~~v~i 87 (268)
.+|.+.|++++|+| +|++| ++|+.|++|++|+.. +++.+..+. .|...|.+++|+|++.+|++|+.|+.+++
T Consensus 99 ~~~~~~v~~~~~s~---d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~ 175 (450)
T 2vdu_B 99 PPIYSYIRNLRLTS---DESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYS 175 (450)
T ss_dssp -CCCCCEEEEEECT---TSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred CccCCceEEEEEcC---CCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEE
Confidence 46888999999985 88886 999999999999999 888888886 56789999999999999999999999999
Q ss_pred EeCCCCCeee----e-eccCCeEEEEEECCC---CCEEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCc
Q 024372 88 WDALTGDEKH----S-FEHKHIVRACAFSED---THLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQT 159 (268)
Q Consensus 88 w~~~~~~~~~----~-~~~~~~v~~v~~~~~---~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 159 (268)
|++.++.... . ..|...|.+++|+|+ +++|++|+.|+.|++||++.+.........|.+.|.+++|+ ++ .
T Consensus 176 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~-~ 253 (450)
T 2vdu_B 176 IDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KD-Y 253 (450)
T ss_dssp EETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-ST-T
T ss_pred EecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CC-C
Confidence 9998776543 3 348889999999999 99999999999999999987654333345688899999998 44 5
Q ss_pred EEEEeeCCCeEEEEeCCCCceEEeecC--------------------------CCCEEEEEECCCCcEEEEe--CCCeEE
Q 024372 160 ILSSCTDSGGVRLWDARSGKIVQTLET--------------------------KSPVTSAEVSRDGRYITTA--DGSSVK 211 (268)
Q Consensus 160 ~~~~~~~d~~i~iwd~~~~~~~~~~~~--------------------------~~~v~~~~~s~~g~~l~~~--~~~~v~ 211 (268)
++++++.|+.|++||+++++++..+.. ...+.+++++|++++++++ .++.|+
T Consensus 254 ~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~ 333 (450)
T 2vdu_B 254 LLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCII 333 (450)
T ss_dssp EEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEE
T ss_pred EEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEE
Confidence 666777889999999999998877752 2358899999999988754 579999
Q ss_pred EEeC--CCc---eeeeEEeCCCCceeeEEcCCCCCEEEe-ccC------CCeEEEEECC
Q 024372 212 FWDA--NHF---GLVKGYNMPCNTESASLEPKLGNIFIA-GGE------DMWVHVFDFH 258 (268)
Q Consensus 212 ~wd~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-gs~------d~~i~~wd~~ 258 (268)
+||+ ... ..+..+..+..+..+++.+ +.++++ ++. +..|.+|.+.
T Consensus 334 iw~~~~~~~~~l~~~~~~~~~~~v~~~~~~~--~~~~v~~~~~~~~~~~~~~i~v~~~~ 390 (450)
T 2vdu_B 334 ILEMSEKQKGDLALKQIITFPYNVISLSAHN--DEFQVTLDNKESSGVQKNFAKFIEYN 390 (450)
T ss_dssp EEEECSSSTTCEEEEEEEECSSCEEEEEEET--TEEEEEECCTTCCSSCCCSEEEEEEE
T ss_pred EEEeccCCCCceeeccEeccCCceEEEEecC--CcEEEEEecccCCCCCCcceEEEEEE
Confidence 9999 444 6667777666677788877 345554 443 4557888754
No 104
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.4e-30 Score=225.88 Aligned_cols=239 Identities=15% Similarity=0.228 Sum_probs=194.3
Q ss_pred eeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEee--CccCcEEEEEecCCCcEEEEeeCCCcEEEEeCCCCCee
Q 024372 19 VVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFE--GHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEK 96 (268)
Q Consensus 19 v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~--~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~ 96 (268)
.+.|+|++ + ++||+|. |++|+|||..+|+.+..+. +|...|.+++|+|++.+|++|+.|++|++||+.+++.+
T Consensus 108 ~~~l~wS~---~-n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~ 182 (420)
T 4gga_A 108 LNLVDWSS---G-NVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRL 182 (420)
T ss_dssp CBCEEECT---T-SEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred ceeEEECC---C-CEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEE
Confidence 45688873 3 4777765 9999999999999877664 67788999999999999999999999999999999887
Q ss_pred eeec-cCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEeeCCCeEEEEeC
Q 024372 97 HSFE-HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDA 175 (268)
Q Consensus 97 ~~~~-~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~iwd~ 175 (268)
..+. |...+.++++ ++..+++|+.|+.+++||.............|...+..+.+.+.+. ++++++.|+.+++||.
T Consensus 183 ~~~~~h~~~v~~~s~--~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~-~l~s~~~D~~v~i~~~ 259 (420)
T 4gga_A 183 RNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGR-HLASGGNDNLVNVWPS 259 (420)
T ss_dssp EEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSS-EEEEEETTSCEEEEES
T ss_pred EEEeCCCCceEEEee--CCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCC-eeeeeeccccceEEee
Confidence 7764 7778888776 4679999999999999998765555556667888999999988775 5566677899999999
Q ss_pred CCCce----EEee-cCCCCEEEEEECCCCc-EEEE---eCCCeEEEEeCCCceeeeEEeCCCCceeeEEcCCCCCEEEec
Q 024372 176 RSGKI----VQTL-ETKSPVTSAEVSRDGR-YITT---ADGSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAG 246 (268)
Q Consensus 176 ~~~~~----~~~~-~~~~~v~~~~~s~~g~-~l~~---~~~~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 246 (268)
++++. +... .+...|.+++|+|++. ++++ +.|+.|++||++++.++..+..+.......+.+. ++.++++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~-~~~lv~~ 338 (420)
T 4gga_A 260 APGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPH-YKELISG 338 (420)
T ss_dssp SCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETT-TTEEEEE
T ss_pred ccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccceeeeeecCC-CCeEEEE
Confidence 88753 2333 3556799999999764 4443 2579999999999999988888878888888875 5555543
Q ss_pred --cCCCeEEEEECCCCcEEeec
Q 024372 247 --GEDMWVHVFDFHTGEQIAIT 266 (268)
Q Consensus 247 --s~d~~i~~wd~~~g~~~~~~ 266 (268)
+.|+.|++||+.+++++..+
T Consensus 339 sg~~d~~I~iwd~~~~~~v~~l 360 (420)
T 4gga_A 339 HGFAQNQLVIWKYPTMAKVAEL 360 (420)
T ss_dssp ECTTTCCEEEEETTTCCEEEEE
T ss_pred EecCCCEEEEEECCCCcEEEEE
Confidence 47999999999999998765
No 105
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=3.4e-31 Score=257.06 Aligned_cols=207 Identities=24% Similarity=0.386 Sum_probs=173.6
Q ss_pred eeecEEeeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecC--CCcEEEEeeCCC
Q 024372 6 VAVPLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDA--NALFSASGSADF 83 (268)
Q Consensus 6 ~~~~~~~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~--~~~~l~s~s~D~ 83 (268)
......+.+|.+.|.+++|+| +|++|++|+.|++|++||..+++.+.++.+|...|.+++|+| ++.++++|+.|+
T Consensus 647 ~~~~~~~~~h~~~v~~~~~s~---~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~ 723 (1249)
T 3sfz_A 647 GEKLLDIKAHEDEVLCCAFSS---DDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDF 723 (1249)
T ss_dssp CCEEEEECCCSSCEEEEEECT---TSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTS
T ss_pred CCEEEEeccCCCCEEEEEEec---CCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCC
Confidence 344556679999999999985 899999999999999999999999999999999999999999 556899999999
Q ss_pred cEEEEeCCCCCeeeee-ccCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCC------------------------
Q 024372 84 TAKLWDALTGDEKHSF-EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPP------------------------ 138 (268)
Q Consensus 84 ~v~iw~~~~~~~~~~~-~~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~------------------------ 138 (268)
.|++||+.++.+...+ .|...|.+++|+|+++.+++++.|+.|++||+..+....
T Consensus 724 ~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 803 (1249)
T 3sfz_A 724 FLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKC 803 (1249)
T ss_dssp CEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCC
T ss_pred eEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEE
Confidence 9999999999887766 488899999999999999999999999999986432100
Q ss_pred ------------------------------eEecCCcccEEEEEEeCCCCcEEEEeeCCCeEEEEeCCCCceEEeecCC-
Q 024372 139 ------------------------------REVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLETK- 187 (268)
Q Consensus 139 ------------------------------~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~- 187 (268)
.....|.+.+.+++|+|++. ++++++.++.|++||+++++.+..+..+
T Consensus 804 ~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~~~~~dg~v~vwd~~~~~~~~~~~~h~ 882 (1249)
T 3sfz_A 804 CSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDH-LAVIALSQYCVELWNIDSRLKVADCRGHL 882 (1249)
T ss_dssp CCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTT-EEEEECSSSCEEEEETTTTEEEEEECCCS
T ss_pred EEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCC-EEEEEeCCCeEEEEEcCCCceeeecCCCc
Confidence 00114566788899988766 4556667799999999999998888654
Q ss_pred CCEEEEEECCCCcEEEE-eCCCeEEEEeCC
Q 024372 188 SPVTSAEVSRDGRYITT-ADGSSVKFWDAN 216 (268)
Q Consensus 188 ~~v~~~~~s~~g~~l~~-~~~~~v~~wd~~ 216 (268)
..+.+++|+|+|+++++ +.|+.|++||+.
T Consensus 883 ~~v~~v~~spdg~~l~s~s~dg~v~vw~~~ 912 (1249)
T 3sfz_A 883 SWVHGVMFSPDGSSFLTASDDQTIRVWETK 912 (1249)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEEHH
T ss_pred cceEEEEECCCCCEEEEEeCCCeEEEEEcc
Confidence 56999999999987765 568899999853
No 106
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.9e-31 Score=224.46 Aligned_cols=212 Identities=18% Similarity=0.271 Sum_probs=166.2
Q ss_pred eecEEeeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCC---eEEEeeCccCcEEEEEecCCCcEEEEeeCCC
Q 024372 7 AVPLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGD---WIGTFEGHKGAVWSCCLDANALFSASGSADF 83 (268)
Q Consensus 7 ~~~~~~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~---~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~ 83 (268)
.....+.+|..+|.+++|+| +|++|++|+.|++|++||+.+++ ++..+.+|...|.+++|+|++.+|++++.|+
T Consensus 96 ~~~~~~~~h~~~v~~v~~sp---~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~ 172 (345)
T 3fm0_A 96 ECVTTLEGHENEVKSVAWAP---SGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDD 172 (345)
T ss_dssp EEEEEECCCSSCEEEEEECT---TSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTS
T ss_pred EEEEEccCCCCCceEEEEeC---CCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCC
Confidence 34556779999999999985 89999999999999999998763 5677889999999999999999999999999
Q ss_pred cEEEEeCCCCCee--eee-ccCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCC---------------eEecCCc
Q 024372 84 TAKLWDALTGDEK--HSF-EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPP---------------REVGNSS 145 (268)
Q Consensus 84 ~v~iw~~~~~~~~--~~~-~~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~---------------~~~~~~~ 145 (268)
+|++||..++... ..+ .|...|.+++|+|++++|++|+.|++|++||...+.... .....|.
T Consensus 173 ~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 252 (345)
T 3fm0_A 173 TVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHS 252 (345)
T ss_dssp CEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCS
T ss_pred cEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCC
Confidence 9999999876532 333 488899999999999999999999999999964322110 1112367
Q ss_pred ccEEEEEEeCCCCcEEEEeeCCCeEEEEeCCCCce---------EEeec-CCCCEEEEEECCCC-cEEEE-eCCCeEEEE
Q 024372 146 GSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKI---------VQTLE-TKSPVTSAEVSRDG-RYITT-ADGSSVKFW 213 (268)
Q Consensus 146 ~~v~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~---------~~~~~-~~~~v~~~~~s~~g-~~l~~-~~~~~v~~w 213 (268)
..|.+++|++.+..++ +++.|+.|++||.+.+.. .+.+. +...|.+++|+|++ .+|++ +.|+.|++|
T Consensus 253 ~~v~~v~~~~~~~~l~-s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W 331 (345)
T 3fm0_A 253 RTIYDIAWCQLTGALA-TACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFW 331 (345)
T ss_dssp SCEEEEEECTTTCCEE-EEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEE
T ss_pred CcEEEEEEecCCCEEE-EEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEE
Confidence 7899999999887655 555679999999876431 12222 44679999999997 46654 679999999
Q ss_pred eCCCceeee
Q 024372 214 DANHFGLVK 222 (268)
Q Consensus 214 d~~~~~~~~ 222 (268)
+++..+...
T Consensus 332 ~~~~~~~~~ 340 (345)
T 3fm0_A 332 KYQRPEGLH 340 (345)
T ss_dssp EECC-----
T ss_pred EecCCCCcc
Confidence 998765443
No 107
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=2.7e-32 Score=228.15 Aligned_cols=206 Identities=20% Similarity=0.322 Sum_probs=165.6
Q ss_pred EEeeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCC--eEEEeeCccCcEEEEEecCC--CcEEEEeeCCCcE
Q 024372 10 LVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGD--WIGTFEGHKGAVWSCCLDAN--ALFSASGSADFTA 85 (268)
Q Consensus 10 ~~~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~--~~~~~~~h~~~V~~~~~~~~--~~~l~s~s~D~~v 85 (268)
..+.+|.++|.+++|+|. .+|++|++|+.|++|++||..+++ .+..+.+|.+.|.+++|+|+ +.++++|+.|++|
T Consensus 51 ~~l~gH~~~V~~v~~~~~-~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i 129 (316)
T 3bg1_A 51 ADLRGHEGPVWQVAWAHP-MYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAI 129 (316)
T ss_dssp EEEECCSSCEEEEEECCG-GGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCE
T ss_pred EEEcCCCccEEEEEeCCC-CCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCE
Confidence 456799999999999751 257899999999999999999874 67788999999999999998 7899999999999
Q ss_pred EEEeCCCCCee---ee-eccCCeEEEEEECCC-----------------CCEEEEeeCCCeEEEEECCCCCC--CCeEec
Q 024372 86 KLWDALTGDEK---HS-FEHKHIVRACAFSED-----------------THLLLTGGFEKILRIFDLNRPDA--PPREVG 142 (268)
Q Consensus 86 ~iw~~~~~~~~---~~-~~~~~~v~~v~~~~~-----------------~~~l~s~~~d~~i~~~d~~~~~~--~~~~~~ 142 (268)
++||+...... .. ..|...|.+++|+|+ ++.|++|+.|+.|++||++.... ....+.
T Consensus 130 ~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~ 209 (316)
T 3bg1_A 130 SLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLE 209 (316)
T ss_dssp EEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCB
T ss_pred EEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecc
Confidence 99999765321 22 237778999999997 47899999999999999864321 223445
Q ss_pred CCcccEEEEEEeCCC---CcEEEEeeCCCeEEEEeCCCC---c-eEEee-cCCCCEEEEEECCCCcEEEE-eCCCeEEEE
Q 024372 143 NSSGSIRTVAWLHSD---QTILSSCTDSGGVRLWDARSG---K-IVQTL-ETKSPVTSAEVSRDGRYITT-ADGSSVKFW 213 (268)
Q Consensus 143 ~~~~~v~~~~~~~~~---~~~~~~~~~d~~i~iwd~~~~---~-~~~~~-~~~~~v~~~~~s~~g~~l~~-~~~~~v~~w 213 (268)
.|.+.|.+++|+|++ ..++++++.|++|+|||+++. + ....+ .+...+.+++|+|++++|++ +.|+.|++|
T Consensus 210 ~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw 289 (316)
T 3bg1_A 210 AHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLW 289 (316)
T ss_dssp CCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEE
T ss_pred cCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEE
Confidence 688899999999875 357888889999999999763 1 11122 24567999999999988765 578999999
Q ss_pred eCC
Q 024372 214 DAN 216 (268)
Q Consensus 214 d~~ 216 (268)
+..
T Consensus 290 ~~~ 292 (316)
T 3bg1_A 290 KES 292 (316)
T ss_dssp EEC
T ss_pred EEC
Confidence 975
No 108
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9e-32 Score=236.49 Aligned_cols=232 Identities=11% Similarity=0.105 Sum_probs=176.8
Q ss_pred cCCCeeeEEEecCCCCCcEEEEEeCCCCeE-----------------E----------eeCCCCCeEEEee-CccCcEEE
Q 024372 15 HSRPVVDLFYSPITPDGFFLVSASKDSSPM-----------------L----------RNGETGDWIGTFE-GHKGAVWS 66 (268)
Q Consensus 15 h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~-----------------i----------w~~~~~~~~~~~~-~h~~~V~~ 66 (268)
-...|.+++|+| ||+++|+|+.|++|+ + |++.+++....+. +|.+.|.+
T Consensus 14 ~~~~v~sv~~Sp---DG~~iASas~D~TV~d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~~ 90 (588)
T 2j04_A 14 FEDWKNNLTWAR---DGTLYLTTFPDISIGQPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYPRV 90 (588)
T ss_dssp CSSSSCCEEECT---TSCEEEECSSSEEEEEECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCEEE
T ss_pred hhccEEEEEECC---CCCEEEEEcCCceeecccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcEEE
Confidence 356889999985 999999999999983 1 2222222222233 56788999
Q ss_pred EEecCCCcEEEEeeCCCcEEEEeCCCCCeeeeeccCC-----eEEEEEECCCCCEEEEeeCCCeEEEEECCCCCC-----
Q 024372 67 CCLDANALFSASGSADFTAKLWDALTGDEKHSFEHKH-----IVRACAFSEDTHLLLTGGFEKILRIFDLNRPDA----- 136 (268)
Q Consensus 67 ~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~-----~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~----- 136 (268)
|+|+|+|+++|+++.||+|++||... +...+.|.. .+.+++|||+|++|++|+.||+|++||+..+..
T Consensus 91 vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~ 168 (588)
T 2j04_A 91 CKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEF 168 (588)
T ss_dssp EEECSSSSCEEEEETTSCEEEEETTE--EEEECCCSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCC
T ss_pred EEECCCCCEEEEEeCCCcEEEEeCCc--eeeeccCCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccc
Confidence 99999999999999999999999644 444445443 499999999999999999999999999976532
Q ss_pred -CCeEe----cCCcccEEEEEEeCCCCcEEEEeeCCCeEEEEeCCCCce---EEeec-C-CCCEEEEEECCCCcEEEEeC
Q 024372 137 -PPREV----GNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKI---VQTLE-T-KSPVTSAEVSRDGRYITTAD 206 (268)
Q Consensus 137 -~~~~~----~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~---~~~~~-~-~~~v~~~~~s~~g~~l~~~~ 206 (268)
....+ ..|.+.|.+++|+|++ ++ +++.|++|++||+..++. .+++. . ...|.+++|+ |..++++.
T Consensus 169 i~l~ti~~~~~gh~~~V~sVawSPdg--La-ass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~ 243 (588)
T 2j04_A 169 YFESSIRLSDAGSKDWVTHIVWYEDV--LV-AALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC 243 (588)
T ss_dssp EEEEEEECSCTTCCCCEEEEEEETTE--EE-EEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC
T ss_pred eeeeeeecccccccccEEEEEEcCCc--EE-EEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEe
Confidence 12333 4567899999999977 44 556679999999988773 35563 3 3579999999 57777766
Q ss_pred CCeEEEEeCCCcee-eeEEeCCCCceeeEE--cCCCCCEEEeccCCCeEEEEECC
Q 024372 207 GSSVKFWDANHFGL-VKGYNMPCNTESASL--EPKLGNIFIAGGEDMWVHVFDFH 258 (268)
Q Consensus 207 ~~~v~~wd~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~gs~d~~i~~wd~~ 258 (268)
+++|++||+..... ...+.+......+.+ ++ ++..++++++||. ++|...
T Consensus 244 ~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~-d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 244 PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEK-ESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCS-SCEEEEECSSCEE-EEEESS
T ss_pred CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCC-CCCEEEEEcCCCC-EEEeec
Confidence 79999999988766 333343444566677 55 6889999999999 999874
No 109
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=8.1e-32 Score=231.85 Aligned_cols=227 Identities=15% Similarity=0.137 Sum_probs=163.6
Q ss_pred CCCcEEEEEeCCCCeEEeeCCCCCeE-----EEeeCccCcEEEEEecC--------CCcEEEEeeCCCcEEEEeCCCCCe
Q 024372 29 PDGFFLVSASKDSSPMLRNGETGDWI-----GTFEGHKGAVWSCCLDA--------NALFSASGSADFTAKLWDALTGDE 95 (268)
Q Consensus 29 ~dg~~l~s~s~d~~i~iw~~~~~~~~-----~~~~~h~~~V~~~~~~~--------~~~~l~s~s~D~~v~iw~~~~~~~ 95 (268)
+++.+||+|+.|++|++||..+++.. ..+.||++.|.+++|+| ++.+|||||.|++|||||+.++.+
T Consensus 99 ~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~ 178 (393)
T 4gq1_A 99 VYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGP 178 (393)
T ss_dssp EEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEE
T ss_pred CCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCce
Confidence 46789999999999999999988643 45689999999999987 788999999999999999977665
Q ss_pred -eeeeccCCeEEEEEECCCC-CEEEEeeCCCeEEEEECCCCCCCCeE------------------------ecCCcccEE
Q 024372 96 -KHSFEHKHIVRACAFSEDT-HLLLTGGFEKILRIFDLNRPDAPPRE------------------------VGNSSGSIR 149 (268)
Q Consensus 96 -~~~~~~~~~v~~v~~~~~~-~~l~s~~~d~~i~~~d~~~~~~~~~~------------------------~~~~~~~v~ 149 (268)
...+.|..++.+++|+|++ .+|++|+.|++|++||++++...... ...|...+.
T Consensus 179 ~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~ 258 (393)
T 4gq1_A 179 ILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLA 258 (393)
T ss_dssp EEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCS
T ss_pred eeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccce
Confidence 4455788999999999987 48999999999999998765422111 123456778
Q ss_pred EEEEeCCCCcEEEEeeCCCeEEEEeCCCCceEEeecCC-CCEE------------------EEEECC--CCcEEEEe-CC
Q 024372 150 TVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLETK-SPVT------------------SAEVSR--DGRYITTA-DG 207 (268)
Q Consensus 150 ~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~-~~v~------------------~~~~s~--~g~~l~~~-~~ 207 (268)
++.|.+.++..+++++.|+++++||+++++....+..+ ..+. ...++| ++.+++++ .|
T Consensus 259 ~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~D 338 (393)
T 4gq1_A 259 NVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQH 338 (393)
T ss_dssp EEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTT
T ss_pred eeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCC
Confidence 88988666667778888899999999887765544321 1111 223333 34455655 58
Q ss_pred CeEEEEeCCCceeeeEEe-CCCCceeeEEcCCCCCEEEeccCCCeEEEEEC
Q 024372 208 SSVKFWDANHFGLVKGYN-MPCNTESASLEPKLGNIFIAGGEDMWVHVFDF 257 (268)
Q Consensus 208 ~~v~~wd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~gs~d~~i~~wd~ 257 (268)
+.|++||+.....+.... ....+.+++|+| +|++|++|+.|+ +.+|++
T Consensus 339 g~V~lwd~~~~~~~~~~~~~~~~V~svafsp-dG~~LA~as~~G-v~lvrL 387 (393)
T 4gq1_A 339 GLIQLINTYEKDSNSIPIQLGMPIVDFCWHQ-DGSHLAIATEGS-VLLTRL 387 (393)
T ss_dssp TEEEEEETTCTTCCEEEEECSSCEEEEEECT-TSSEEEEEESSE-EEEEEE
T ss_pred CEEEEEECCCCcEEEEecCCCCcEEEEEEcC-CCCEEEEEeCCC-eEEEEE
Confidence 999999998876665543 444567788887 799999998877 556654
No 110
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=7.5e-30 Score=211.86 Aligned_cols=239 Identities=15% Similarity=0.199 Sum_probs=189.3
Q ss_pred eeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEee--CccCcEEEEEecCCCcEEEEeeCCCcEEEEeCCCCCee
Q 024372 19 VVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFE--GHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEK 96 (268)
Q Consensus 19 v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~--~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~ 96 (268)
.+.|+|+| ++ +||+| .|++|+|||..+|+++..+. +|...|.+++|+|++.++++|+.|++|++|++.+++..
T Consensus 28 ~~~l~WS~---~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~ 102 (318)
T 4ggc_A 28 LNLVDWSS---GN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRL 102 (318)
T ss_dssp CBCEEECT---TS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE
T ss_pred ceEEEECC---CC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeE
Confidence 46799984 54 67765 59999999999999888775 67788999999999999999999999999999999887
Q ss_pred eeec-cCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEeeCCCeEEEEeC
Q 024372 97 HSFE-HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDA 175 (268)
Q Consensus 97 ~~~~-~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~iwd~ 175 (268)
..+. |...+.++ ++++..+++++.++.+++|+.............|...+..+.+.+.+. ++++++.|+.|++||+
T Consensus 103 ~~~~~h~~~~~~~--~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~s~~~d~~i~iwd~ 179 (318)
T 4ggc_A 103 RNMTSHSARVGSL--SWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGR-HLASGGNDNLVNVWPS 179 (318)
T ss_dssp EEEECCSSCEEEE--EEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSS-EEEEEETTSCEEEEES
T ss_pred EEecCccceEEEe--ecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCC-EEEEEecCcceeEEEC
Confidence 7764 66666654 455779999999999999998765555556667888899999887765 5566778899999999
Q ss_pred CCCceE----E-eecCCCCEEEEEECCCCcE-EE--Ee-CCCeEEEEeCCCceeeeEEeCCCCceeeEEcCCCCCEEEe-
Q 024372 176 RSGKIV----Q-TLETKSPVTSAEVSRDGRY-IT--TA-DGSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIA- 245 (268)
Q Consensus 176 ~~~~~~----~-~~~~~~~v~~~~~s~~g~~-l~--~~-~~~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 245 (268)
++++.. . ...+...+.++.++|++.. +. ++ .++.|++||.+..................+.+. +..+++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~ 258 (318)
T 4ggc_A 180 APGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPH-YKELISG 258 (318)
T ss_dssp SCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETT-TTEEEEE
T ss_pred CCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeeeccc-ccceEEE
Confidence 987642 2 2234567999999998643 32 22 468999999998887777777767777777775 555544
Q ss_pred -ccCCCeEEEEECCCCcEEeec
Q 024372 246 -GGEDMWVHVFDFHTGEQIAIT 266 (268)
Q Consensus 246 -gs~d~~i~~wd~~~g~~~~~~ 266 (268)
|+.|+.|++||+.+++++..+
T Consensus 259 sg~~d~~i~iwd~~~~~~~~~l 280 (318)
T 4ggc_A 259 HGFAQNQLVIWKYPTMAKVAEL 280 (318)
T ss_dssp ECTTTCCEEEEETTTCCEEEEE
T ss_pred EEcCCCEEEEEECCCCcEEEEE
Confidence 457999999999999998765
No 111
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=4.4e-30 Score=222.65 Aligned_cols=240 Identities=13% Similarity=0.090 Sum_probs=204.6
Q ss_pred eecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEE-EEeeCCCcEEEEeCC
Q 024372 13 HGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFS-ASGSADFTAKLWDAL 91 (268)
Q Consensus 13 ~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l-~s~s~D~~v~iw~~~ 91 (268)
.+|.+.|.+++|+| +|.++++++.|+.+++||..+++.+.++..|...+..++|+|++.++ ++++.|+.|++||+.
T Consensus 166 ~~~~~~v~~~~~~~---~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~ 242 (433)
T 3bws_A 166 KKKLGFVETISIPE---HNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRK 242 (433)
T ss_dssp HTTCCEEEEEEEGG---GTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred cccCCceeEEEEcC---CCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECC
Confidence 47899999999974 89999999999999999999999999999999999999999999877 566689999999999
Q ss_pred CCCeeeeeccCCeEEEEEECCCCCEEEEee--------CCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEE
Q 024372 92 TGDEKHSFEHKHIVRACAFSEDTHLLLTGG--------FEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSS 163 (268)
Q Consensus 92 ~~~~~~~~~~~~~v~~v~~~~~~~~l~s~~--------~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 163 (268)
++.....+.....+..++|+|+++.+++++ .|+.|++||+.+++. .... .+.+.+..++|+|++..++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~-~~~~-~~~~~~~~~~~~~~g~~l~~~ 320 (433)
T 3bws_A 243 TKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKL-IDTI-GPPGNKRHIVSGNTENKIYVS 320 (433)
T ss_dssp TTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEE-EEEE-EEEECEEEEEECSSTTEEEEE
T ss_pred CCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcE-Eeec-cCCCCcceEEECCCCCEEEEE
Confidence 998888887777899999999999999888 488999999976532 2222 334578889999988888888
Q ss_pred eeCCCeEEEEeCCCCceEEeecCCCCEEEEEECCCCcEEEEe-C---------------CCeEEEEeCCCceeeeEEeCC
Q 024372 164 CTDSGGVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYITTA-D---------------GSSVKFWDANHFGLVKGYNMP 227 (268)
Q Consensus 164 ~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~-~---------------~~~v~~wd~~~~~~~~~~~~~ 227 (268)
++.++.|++||+++++.+..+.....+.+++++|+|++++++ . |+.|++||+.+.+.+..+...
T Consensus 321 ~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~ 400 (433)
T 3bws_A 321 DMCCSKIEVYDLKEKKVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAG 400 (433)
T ss_dssp ETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECS
T ss_pred ecCCCEEEEEECCCCcEEEEecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCC
Confidence 888899999999999999888877789999999999876544 3 359999999999888888776
Q ss_pred CCceeeEEcCCCCCEEEecc-CCCeEEEEECC
Q 024372 228 CNTESASLEPKLGNIFIAGG-EDMWVHVFDFH 258 (268)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~gs-~d~~i~~wd~~ 258 (268)
..+..+.++| +++++++++ .|+.|++|++.
T Consensus 401 ~~~~~~~~s~-dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 401 NQPTGLDVSP-DNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp SSEEEEEECT-TSCEEEEEETTTTEEEEEEET
T ss_pred CCCceEEEcC-CCCEEEEEECCCCeEEEEEec
Confidence 6667778877 588877765 59999999975
No 112
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=4.5e-31 Score=225.10 Aligned_cols=197 Identities=12% Similarity=0.174 Sum_probs=160.0
Q ss_pred ecCCCeeeEEEecCCCCCcEEEEEe--CCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCCCcEEEEeCC
Q 024372 14 GHSRPVVDLFYSPITPDGFFLVSAS--KDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDAL 91 (268)
Q Consensus 14 ~h~~~v~~~~f~~~~~dg~~l~s~s--~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw~~~ 91 (268)
.++..+.+++|+| ||++||+|+ .|++|+|||..+++.+.++. |.+.|.+++|+|++.++++++.| .+++|+..
T Consensus 131 ~~~~~~~~v~fSp---Dg~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~ 205 (365)
T 4h5i_A 131 NADDYTKLVYISR---EGTVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGS-SLEVISTV 205 (365)
T ss_dssp CTTCCEEEEEECT---TSSCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSS-CEEEEETT
T ss_pred CcccCEEEEEEcC---CCCEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEeccce-eEEEEEec
Confidence 4556688999985 999987554 78999999999999998886 77889999999999999999855 56666666
Q ss_pred CCCeeee---eccCCeEEEEEECCCCCEEEEeeCCC----eEEEEECCCCCCC---CeEecCCcccEEEEEEeCCCCcEE
Q 024372 92 TGDEKHS---FEHKHIVRACAFSEDTHLLLTGGFEK----ILRIFDLNRPDAP---PREVGNSSGSIRTVAWLHSDQTIL 161 (268)
Q Consensus 92 ~~~~~~~---~~~~~~v~~v~~~~~~~~l~s~~~d~----~i~~~d~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~~ 161 (268)
++..... ..|...|.+++|+|+++.+++++.|+ .++.|++...... ......|...|++++|+|++. ++
T Consensus 206 ~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~-~l 284 (365)
T 4h5i_A 206 TGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGE-LA 284 (365)
T ss_dssp TCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSC-EE
T ss_pred cCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCC-ce
Confidence 6665433 23677899999999999999999887 6888887543221 123456778899999999775 56
Q ss_pred EEeeCCCeEEEEeCCCCceEEee-c-CCCCEEEEEECCCCcEEEE-eCCCeEEEEeCC
Q 024372 162 SSCTDSGGVRLWDARSGKIVQTL-E-TKSPVTSAEVSRDGRYITT-ADGSSVKFWDAN 216 (268)
Q Consensus 162 ~~~~~d~~i~iwd~~~~~~~~~~-~-~~~~v~~~~~s~~g~~l~~-~~~~~v~~wd~~ 216 (268)
++++.|++|+|||++++++++++ . |..+|.+++|+|||++|++ +.|++||+||+.
T Consensus 285 asgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip 342 (365)
T 4h5i_A 285 VLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLP 342 (365)
T ss_dssp EEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECC
T ss_pred EEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcC
Confidence 67788899999999999999876 4 4567999999999999876 579999999984
No 113
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.98 E-value=3.3e-29 Score=214.38 Aligned_cols=232 Identities=12% Similarity=0.103 Sum_probs=194.3
Q ss_pred CcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEE-EEeeCCCcEEEEeCCCCCeeeeeccCCeEEEEE
Q 024372 31 GFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFS-ASGSADFTAKLWDALTGDEKHSFEHKHIVRACA 109 (268)
Q Consensus 31 g~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l-~s~s~D~~v~iw~~~~~~~~~~~~~~~~v~~v~ 109 (268)
+.++++++.|++|++||..+++++..+.+|.. +.+++|+|++.++ ++++.|++|++||+.+++....+.+...+.+++
T Consensus 2 ~~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~ 80 (391)
T 1l0q_A 2 TFAYIANSESDNISVIDVTSNKVTATIPVGSN-PMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVA 80 (391)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEECSSS-EEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEEEEE
T ss_pred CEEEEEcCCCCEEEEEECCCCeEEEEeecCCC-cceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCCCccceE
Confidence 35788999999999999999999999988754 8999999999876 788899999999999999988888777999999
Q ss_pred ECCCCCEEE-EeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEeeCCCeEEEEeCCCCceEEeecCCC
Q 024372 110 FSEDTHLLL-TGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLETKS 188 (268)
Q Consensus 110 ~~~~~~~l~-s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~ 188 (268)
|+|+++.++ +++.++.|++||+.+++. ...... ...+.+++|+|++..++++++.++.|++||+++++.+..+..+.
T Consensus 81 ~spdg~~l~~~~~~~~~v~v~d~~~~~~-~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~ 158 (391)
T 1l0q_A 81 VSPDGKQVYVTNMASSTLSVIDTTSNTV-AGTVKT-GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGR 158 (391)
T ss_dssp ECTTSSEEEEEETTTTEEEEEETTTTEE-EEEEEC-SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCS
T ss_pred ECCCCCEEEEEECCCCEEEEEECCCCeE-EEEEeC-CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCC
Confidence 999999775 555779999999976543 223333 34678999999888787788888999999999999999888777
Q ss_pred CEEEEEECCCCcEE-EEe-CCCeEEEEeCCCceeeeEEeCCCCceeeEEcCCCCCEEEecc---CCCeEEEEECCCCcEE
Q 024372 189 PVTSAEVSRDGRYI-TTA-DGSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGG---EDMWVHVFDFHTGEQI 263 (268)
Q Consensus 189 ~v~~~~~s~~g~~l-~~~-~~~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs---~d~~i~~wd~~~g~~~ 263 (268)
.+..++|+|+++++ +++ .++.|++||+++.+.+..+........+.+.+ +++++++++ .|+.|++||+.+++.+
T Consensus 159 ~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~-~g~~l~~~~~~~~~~~v~~~d~~~~~~~ 237 (391)
T 1l0q_A 159 SPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNP-EGTKAYVTNVDKYFNTVSMIDTGTNKIT 237 (391)
T ss_dssp SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECT-TSSEEEEEEECSSCCEEEEEETTTTEEE
T ss_pred CcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEECC-CCCEEEEEecCcCCCcEEEEECCCCeEE
Confidence 88999999999876 444 57899999999988888777766666777777 588777776 6899999999998876
Q ss_pred eec
Q 024372 264 AIT 266 (268)
Q Consensus 264 ~~~ 266 (268)
...
T Consensus 238 ~~~ 240 (391)
T 1l0q_A 238 ARI 240 (391)
T ss_dssp EEE
T ss_pred EEE
Confidence 653
No 114
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.98 E-value=5.6e-30 Score=216.22 Aligned_cols=230 Identities=11% Similarity=0.028 Sum_probs=173.3
Q ss_pred CCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCC---------CCCeEEEee-CccCcEEEEEecC--CCcEEEEeeCCCc
Q 024372 17 RPVVDLFYSPITPDGFFLVSASKDSSPMLRNGE---------TGDWIGTFE-GHKGAVWSCCLDA--NALFSASGSADFT 84 (268)
Q Consensus 17 ~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~---------~~~~~~~~~-~h~~~V~~~~~~~--~~~~l~s~s~D~~ 84 (268)
..|.++.|+| + +++++.|+++++|+.. +++.+..+. +|.++|.+++|+| ++.++++++.|++
T Consensus 77 ~~v~~~~~~~---~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~ 150 (343)
T 3lrv_A 77 PNPRTGGEHP---A---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGT 150 (343)
T ss_dssp ECCCTTCCCC---S---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCC
T ss_pred CCceeeeeCC---c---eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCc
Confidence 5677777775 3 8999999999999655 566555554 7888999999999 9999999999999
Q ss_pred EEEEeCCCCCeeeee--ccCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEecC-CcccEEEEEEeCCCCcEE
Q 024372 85 AKLWDALTGDEKHSF--EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGN-SSGSIRTVAWLHSDQTIL 161 (268)
Q Consensus 85 v~iw~~~~~~~~~~~--~~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~ 161 (268)
|++||+.++...... .+...+.+++|+|++++|++|+.|+.|++||++++......+.. |.++|.+++|+|++.. +
T Consensus 151 i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~-l 229 (343)
T 3lrv_A 151 IGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYW-M 229 (343)
T ss_dssp EEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSE-E
T ss_pred EEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCE-E
Confidence 999999998886655 34557999999999999999999999999999887655345555 8899999999987765 4
Q ss_pred EEeeCCCeEEEEeCCCCceEEeecC---C-CCE--EEEEECCCCcEEEE-eC-CCeEEEEeCCCceeeeEEeCCCCceee
Q 024372 162 SSCTDSGGVRLWDARSGKIVQTLET---K-SPV--TSAEVSRDGRYITT-AD-GSSVKFWDANHFGLVKGYNMPCNTESA 233 (268)
Q Consensus 162 ~~~~~d~~i~iwd~~~~~~~~~~~~---~-~~v--~~~~~s~~g~~l~~-~~-~~~v~~wd~~~~~~~~~~~~~~~~~~~ 233 (268)
+++++ +.|++||++++++++.+.. + .++ .+++|+|+|+++++ +. ++.|++|++......... ......
T Consensus 230 ~s~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~---~~~~~~ 305 (343)
T 3lrv_A 230 VVECD-QTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWTK---DEESAL 305 (343)
T ss_dssp EEEES-SBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCSEEE---EEEEEC
T ss_pred EEEeC-CeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccccceEe---cCceeE
Confidence 45555 5999999999887665542 1 223 36999999999887 34 889999998654322111 111222
Q ss_pred EEcC--CCCCEEEeccCCCeEEEEEC
Q 024372 234 SLEP--KLGNIFIAGGEDMWVHVFDF 257 (268)
Q Consensus 234 ~~~~--~~~~~~~~gs~d~~i~~wd~ 257 (268)
.+.+ .+...+++++.|+.++++-.
T Consensus 306 ~~~~~~~~~~~l~~~~~d~~~~~~~~ 331 (343)
T 3lrv_A 306 CLQSDTADFTDMDVVCGDGGIAAILK 331 (343)
T ss_dssp CC----CCCCEEEEEEETTEEEEEEE
T ss_pred ecCccccccceeEEEecCCceEEEEe
Confidence 3322 25778999999999888853
No 115
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.97 E-value=1.7e-29 Score=216.31 Aligned_cols=240 Identities=15% Similarity=0.257 Sum_probs=166.4
Q ss_pred ecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCC---CcEEEEeeCCCcEEEEeC
Q 024372 14 GHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDAN---ALFSASGSADFTAKLWDA 90 (268)
Q Consensus 14 ~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~---~~~l~s~s~D~~v~iw~~ 90 (268)
+|..+|.+++|+| .++++|++++.|+.+++||..+++.+..+. |...+..+++.+. +.++++++.|+.|++||+
T Consensus 97 ~~~~~v~~~~~~~--~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~ 173 (408)
T 4a11_B 97 VHRYSVETVQWYP--HDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDL 173 (408)
T ss_dssp CCSSCEEEEEECT--TCTTCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEES
T ss_pred cCCCcEEEEEEcc--CCCcEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeC
Confidence 5999999999986 367899999999999999999999888877 7788999999874 449999999999999999
Q ss_pred CCCCeeeeec-cCCeEEEEEECCCCC-EEEEeeCCCeEEEEECCCCCCCCeEe---------------cCCcccEEEEEE
Q 024372 91 LTGDEKHSFE-HKHIVRACAFSEDTH-LLLTGGFEKILRIFDLNRPDAPPREV---------------GNSSGSIRTVAW 153 (268)
Q Consensus 91 ~~~~~~~~~~-~~~~v~~v~~~~~~~-~l~s~~~d~~i~~~d~~~~~~~~~~~---------------~~~~~~v~~~~~ 153 (268)
.++.....+. |...|.+++|+|+++ ++++|+.|+.|++||++......... ..|.+.+.+++|
T Consensus 174 ~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 253 (408)
T 4a11_B 174 KSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCF 253 (408)
T ss_dssp SSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEE
T ss_pred CCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEE
Confidence 9888777775 888999999999988 69999999999999997654333322 457788999999
Q ss_pred eCCCCcEEEEeeCCCeEEEEeCCCCc-----------------------------------------------eEEeec-
Q 024372 154 LHSDQTILSSCTDSGGVRLWDARSGK-----------------------------------------------IVQTLE- 185 (268)
Q Consensus 154 ~~~~~~~~~~~~~d~~i~iwd~~~~~-----------------------------------------------~~~~~~- 185 (268)
+|++.. +++++.|+.|++||+++++ .+..+.
T Consensus 254 ~~~~~~-l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~ 332 (408)
T 4a11_B 254 TSDGLH-LLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKG 332 (408)
T ss_dssp CTTSSE-EEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECC
T ss_pred cCCCCE-EEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeecc
Confidence 987654 5566677999999987653 334444
Q ss_pred CCCCEEEEEECCCCcEEEE-eCCCeEEEEeCCCceeeeEEeCCCCceeeEEcCCCCCEEEeccCCCeEEEEECCC
Q 024372 186 TKSPVTSAEVSRDGRYITT-ADGSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHT 259 (268)
Q Consensus 186 ~~~~v~~~~~s~~g~~l~~-~~~~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~d~~i~~wd~~~ 259 (268)
+...+.+++|+|++++|++ +.|+.|++||++..+.+........ ...+.+.....+.+++.|+.+++|+...
T Consensus 333 ~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 405 (408)
T 4a11_B 333 HYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDDDETTT--KSQLNPAFEDAWSSSDEEGGTSAWSHPQ 405 (408)
T ss_dssp CSSCEEEEEEETTTTEEEEEETTSCEEEEEECC------------------------------------------
T ss_pred CCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCCCceEe--ccccccccceeecccCccCceeecCCcc
Confidence 3457999999999998876 4689999999998877655443222 2233443456677788899999998653
No 116
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.3e-29 Score=214.97 Aligned_cols=210 Identities=19% Similarity=0.252 Sum_probs=173.0
Q ss_pred eecEEeeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCC--eEEEeeCccCcEEEEEecCC--CcEEEEeeCC
Q 024372 7 AVPLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGD--WIGTFEGHKGAVWSCCLDAN--ALFSASGSAD 82 (268)
Q Consensus 7 ~~~~~~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~--~~~~~~~h~~~V~~~~~~~~--~~~l~s~s~D 82 (268)
.....+.+|..+|++++|+|. .++++|++|+.|++|++||..+++ .+..+.+|...|.+++|+|+ +.++++++.|
T Consensus 46 ~~~~~~~~h~~~v~~~~~~~~-~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d 124 (379)
T 3jrp_A 46 KLIDTLTGHEGPVWRVDWAHP-KFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD 124 (379)
T ss_dssp EEEEEECCCSSCEEEEEECCG-GGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT
T ss_pred eeeeEecCCCCcEEEEEeCCC-CCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCC
Confidence 344456789999999999852 238899999999999999999987 77888899999999999999 8999999999
Q ss_pred CcEEEEeCCCCCee---eeeccCCeEEEEEECC-------------CCCEEEEeeCCCeEEEEECCCCCCC---CeEecC
Q 024372 83 FTAKLWDALTGDEK---HSFEHKHIVRACAFSE-------------DTHLLLTGGFEKILRIFDLNRPDAP---PREVGN 143 (268)
Q Consensus 83 ~~v~iw~~~~~~~~---~~~~~~~~v~~v~~~~-------------~~~~l~s~~~d~~i~~~d~~~~~~~---~~~~~~ 143 (268)
+.|++||+.+.... ....|...|.+++|+| +++.+++++.|+.|++||++.+... ......
T Consensus 125 ~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 204 (379)
T 3jrp_A 125 GKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEG 204 (379)
T ss_dssp SEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECC
T ss_pred CcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEec
Confidence 99999999877432 2335788999999999 6999999999999999998765422 234456
Q ss_pred CcccEEEEEEeCCC--CcEEEEeeCCCeEEEEeCCCCc---eEEeec---CCCCEEEEEECCCCcEEEE-eCCCeEEEEe
Q 024372 144 SSGSIRTVAWLHSD--QTILSSCTDSGGVRLWDARSGK---IVQTLE---TKSPVTSAEVSRDGRYITT-ADGSSVKFWD 214 (268)
Q Consensus 144 ~~~~v~~~~~~~~~--~~~~~~~~~d~~i~iwd~~~~~---~~~~~~---~~~~v~~~~~s~~g~~l~~-~~~~~v~~wd 214 (268)
|.+.+.+++|+|++ +.++++++.||.|++||+++++ ....+. +...+.+++|+|+|++|++ +.|+.|++||
T Consensus 205 h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~ 284 (379)
T 3jrp_A 205 HSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWK 284 (379)
T ss_dssp CSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEE
T ss_pred ccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEe
Confidence 78899999999984 5677788888999999999874 222222 4567999999999988765 5789999999
Q ss_pred CCC
Q 024372 215 ANH 217 (268)
Q Consensus 215 ~~~ 217 (268)
+..
T Consensus 285 ~~~ 287 (379)
T 3jrp_A 285 ENL 287 (379)
T ss_dssp EEE
T ss_pred CCC
Confidence 863
No 117
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=1.3e-29 Score=211.77 Aligned_cols=214 Identities=17% Similarity=0.262 Sum_probs=174.4
Q ss_pred ecEEeeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCC---------CeEEEeeCccCcEEEEEecCC--CcEE
Q 024372 8 VPLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETG---------DWIGTFEGHKGAVWSCCLDAN--ALFS 76 (268)
Q Consensus 8 ~~~~~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~---------~~~~~~~~h~~~V~~~~~~~~--~~~l 76 (268)
....+.+|..+|.+++|+|. .++++|++|+.|++|++||..++ +.+..+.+|.+.|.+++|+|+ +.++
T Consensus 49 ~~~~~~~~~~~v~~~~~~~~-~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l 127 (351)
T 3f3f_A 49 LSDSWRAHDSSIVAIDWASP-EYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKL 127 (351)
T ss_dssp EEEEEECCSSCEEEEEECCG-GGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEE
T ss_pred ecceeccCCCcEEEEEEcCC-CCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEE
Confidence 34445689999999999862 15889999999999999999887 567888999999999999999 9999
Q ss_pred EEeeCCCcEEEEeCCCCCeeeee--------------ccCCeEEEEEECCC---CCEEEEeeCCCeEEEEECCCCCCC-C
Q 024372 77 ASGSADFTAKLWDALTGDEKHSF--------------EHKHIVRACAFSED---THLLLTGGFEKILRIFDLNRPDAP-P 138 (268)
Q Consensus 77 ~s~s~D~~v~iw~~~~~~~~~~~--------------~~~~~v~~v~~~~~---~~~l~s~~~d~~i~~~d~~~~~~~-~ 138 (268)
++++.|+.|++||+.++.....+ .+...+.++.|+|+ +..+++++.++.+.+|+...+... .
T Consensus 128 ~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 207 (351)
T 3f3f_A 128 ACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVA 207 (351)
T ss_dssp EEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEE
T ss_pred EEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeee
Confidence 99999999999999877654332 25567899999997 899999999999988876544321 2
Q ss_pred eEecCCcccEEEEEEeCCCC---cEEEEeeCCCeEEEEeCCCC-------------------------------------
Q 024372 139 REVGNSSGSIRTVAWLHSDQ---TILSSCTDSGGVRLWDARSG------------------------------------- 178 (268)
Q Consensus 139 ~~~~~~~~~v~~~~~~~~~~---~~~~~~~~d~~i~iwd~~~~------------------------------------- 178 (268)
.....|.+.|.+++|+|++. .++++++.||.|++||++++
T Consensus 208 ~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (351)
T 3f3f_A 208 AKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEK 287 (351)
T ss_dssp EECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC------------------------------------
T ss_pred eecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCccccccccccccccccee
Confidence 34456788999999999873 67888888999999999875
Q ss_pred ---------ceEEeec-CCCCEEEEEECCCCcEEEE-eCCCeEEEEeCCCceeee
Q 024372 179 ---------KIVQTLE-TKSPVTSAEVSRDGRYITT-ADGSSVKFWDANHFGLVK 222 (268)
Q Consensus 179 ---------~~~~~~~-~~~~v~~~~~s~~g~~l~~-~~~~~v~~wd~~~~~~~~ 222 (268)
+.+..+. +...+.+++|+|++++|++ +.|+.|++||+...+.++
T Consensus 288 ~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~ 342 (351)
T 3f3f_A 288 AELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFK 342 (351)
T ss_dssp ---CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEE
T ss_pred eeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcchh
Confidence 4455555 3467999999999988765 578999999998765443
No 118
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.97 E-value=7.2e-29 Score=215.01 Aligned_cols=245 Identities=11% Similarity=0.085 Sum_probs=200.0
Q ss_pred CCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEE-----EeeCccCcEEEEEecCCCcEEEEeeCCCcEEEEeC
Q 024372 16 SRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIG-----TFEGHKGAVWSCCLDANALFSASGSADFTAKLWDA 90 (268)
Q Consensus 16 ~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~-----~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw~~ 90 (268)
...+.+++|+| ++.++++++.|++|++||..+++.+. .+.+|.+.|.+++|++++.++++++.|+.|++||+
T Consensus 122 ~~~~~~~~~s~---~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~ 198 (433)
T 3bws_A 122 GFQPKSVRFID---NTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDL 198 (433)
T ss_dssp SSCBCCCEESS---SSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEET
T ss_pred CCCceEEEEeC---CCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEEC
Confidence 34566899986 78899999999999999999999887 45689999999999999999999999999999999
Q ss_pred CCCCeeeeec-cCCeEEEEEECCCCCEEE-EeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEee---
Q 024372 91 LTGDEKHSFE-HKHIVRACAFSEDTHLLL-TGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCT--- 165 (268)
Q Consensus 91 ~~~~~~~~~~-~~~~v~~v~~~~~~~~l~-s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~--- 165 (268)
.+++....+. |...+.+++|+|+++.++ +++.|+.|++||+++++. ..... ..+.+.+++|+|++..+++++.
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~-~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~ 276 (433)
T 3bws_A 199 KTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLE-IRKTD-KIGLPRGLLLSKDGKELYIAQFSAS 276 (433)
T ss_dssp TTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEE-EEECC-CCSEEEEEEECTTSSEEEEEEEESC
T ss_pred CCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcE-EEEec-CCCCceEEEEcCCCCEEEEEECCCC
Confidence 9988877775 677899999999998775 555899999999876532 22222 3456889999998877666653
Q ss_pred ----CCCeEEEEeCCCCceEEeecCCCCEEEEEECCCCcEE-EE-eCCCeEEEEeCCCceeeeEEeCCCCceeeEEcCCC
Q 024372 166 ----DSGGVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYI-TT-ADGSSVKFWDANHFGLVKGYNMPCNTESASLEPKL 239 (268)
Q Consensus 166 ----~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~g~~l-~~-~~~~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (268)
.|+.|++||+++++.+..+.+...+.+++|+|+++.+ ++ +.++.|++||+++.+.+..+.....+..+++++ +
T Consensus 277 ~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~-d 355 (433)
T 3bws_A 277 NQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPVFDKPNTIALSP-D 355 (433)
T ss_dssp TTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECT-T
T ss_pred ccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecCCCCCCeEEEcC-C
Confidence 4689999999999988877665678899999999754 44 468999999999988888887766677788887 5
Q ss_pred CCEEEeccC---------------CCeEEEEECCCCcEEeec
Q 024372 240 GNIFIAGGE---------------DMWVHVFDFHTGEQIAIT 266 (268)
Q Consensus 240 ~~~~~~gs~---------------d~~i~~wd~~~g~~~~~~ 266 (268)
++++++++. |+.|++||..+++.+..+
T Consensus 356 g~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~ 397 (433)
T 3bws_A 356 GKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFW 397 (433)
T ss_dssp SSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEE
T ss_pred CCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEe
Confidence 877776655 569999999999887653
No 119
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=4.7e-30 Score=213.09 Aligned_cols=173 Identities=12% Similarity=0.005 Sum_probs=132.2
Q ss_pred CCCeEEeeC-CCCCeEEEeeCccCcEEEEEecC---CCcEEEEeeCCCcEEEEeCCCCCeeeeec-cC---CeEEEEEEC
Q 024372 40 DSSPMLRNG-ETGDWIGTFEGHKGAVWSCCLDA---NALFSASGSADFTAKLWDALTGDEKHSFE-HK---HIVRACAFS 111 (268)
Q Consensus 40 d~~i~iw~~-~~~~~~~~~~~h~~~V~~~~~~~---~~~~l~s~s~D~~v~iw~~~~~~~~~~~~-~~---~~v~~v~~~ 111 (268)
|++|++|++ .+|+.+..+.+|...+..++|++ ++.+|+|++.|++|||||+.++++++++. |. ..+.+++|+
T Consensus 156 d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafS 235 (356)
T 2w18_A 156 DQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYS 235 (356)
T ss_dssp TCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEE
T ss_pred CCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEEC
Confidence 888889988 44888888888888888888888 67899999999999999999999988885 32 357778999
Q ss_pred CCCCEE------------EEeeCCCeEEEEECCCCCCCCeE----ecCCcccEEEEEEeCCCCcEEEEeeCCCeEEEEeC
Q 024372 112 EDTHLL------------LTGGFEKILRIFDLNRPDAPPRE----VGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDA 175 (268)
Q Consensus 112 ~~~~~l------------~s~~~d~~i~~~d~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~iwd~ 175 (268)
|+++++ ++|+.|++|++||..++...... ...|.+.+.+..+. +.++++++.|++|+|||+
T Consensus 236 pdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s---g~~lASgS~DgTIkIWDl 312 (356)
T 2w18_A 236 EMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK---DHCAAAILTSGTIAIWDL 312 (356)
T ss_dssp ETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE---TTEEEEEETTSCEEEEET
T ss_pred CCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC---CCEEEEEcCCCcEEEEEC
Confidence 999876 66889999999998765322111 12333344433332 346788888999999999
Q ss_pred CCCceEEeecCC-CC-EEEEEECCCCcEEEEe-CCCeEEEEeC
Q 024372 176 RSGKIVQTLETK-SP-VTSAEVSRDGRYITTA-DGSSVKFWDA 215 (268)
Q Consensus 176 ~~~~~~~~~~~~-~~-v~~~~~s~~g~~l~~~-~~~~v~~wd~ 215 (268)
+++++++++..+ .. +.+++|+|||++|+++ .|++|++||+
T Consensus 313 ~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 313 LLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp TTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred CCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 999999999854 33 4468999999998765 6899999995
No 120
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.97 E-value=1e-30 Score=224.98 Aligned_cols=206 Identities=12% Similarity=0.014 Sum_probs=156.2
Q ss_pred eeecCCCeeeEEEecC-----CCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCc-EEEEeeCCCcE
Q 024372 12 CHGHSRPVVDLFYSPI-----TPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANAL-FSASGSADFTA 85 (268)
Q Consensus 12 ~~~h~~~v~~~~f~~~-----~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~-~l~s~s~D~~v 85 (268)
+.||++.|++++|+|. ..||++||+|+.|++|+|||+.++..+..+.+|.++|.+++|+|++. ++++++.|++|
T Consensus 132 ~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v 211 (393)
T 4gq1_A 132 KSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNI 211 (393)
T ss_dssp TTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEE
T ss_pred cCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEE
Confidence 4699999999999973 23899999999999999999999888888888999999999999874 79999999999
Q ss_pred EEEeCCCCCeeeee--------------------------ccCCeEEEEEEC-CCCCEEEEeeCCCeEEEEECCCCCCCC
Q 024372 86 KLWDALTGDEKHSF--------------------------EHKHIVRACAFS-EDTHLLLTGGFEKILRIFDLNRPDAPP 138 (268)
Q Consensus 86 ~iw~~~~~~~~~~~--------------------------~~~~~v~~v~~~-~~~~~l~s~~~d~~i~~~d~~~~~~~~ 138 (268)
++||+.+++..... .|...+.++.|+ ++++.+++++.|+.+++||+......
T Consensus 212 ~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~- 290 (393)
T 4gq1_A 212 RIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDY- 290 (393)
T ss_dssp EEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------
T ss_pred EEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCC-
Confidence 99999876543221 244567788875 79999999999999999998654321
Q ss_pred eEecCCcccE------------------EEEEEeC-CCCcEEEEeeCCCeEEEEeCCCCceEEee-cCCCCEEEEEECCC
Q 024372 139 REVGNSSGSI------------------RTVAWLH-SDQTILSSCTDSGGVRLWDARSGKIVQTL-ETKSPVTSAEVSRD 198 (268)
Q Consensus 139 ~~~~~~~~~v------------------~~~~~~~-~~~~~~~~~~~d~~i~iwd~~~~~~~~~~-~~~~~v~~~~~s~~ 198 (268)
..+..+...+ ....+.+ .+..++++++.||.|+|||+.+++++..+ .++.+|.+++|+||
T Consensus 291 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspd 370 (393)
T 4gq1_A 291 NEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQD 370 (393)
T ss_dssp -------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTT
T ss_pred ceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCC
Confidence 1111111111 1223333 34556778888999999999999877654 46678999999999
Q ss_pred CcEEEEeCCCeEEEEeCCCc
Q 024372 199 GRYITTADGSSVKFWDANHF 218 (268)
Q Consensus 199 g~~l~~~~~~~v~~wd~~~~ 218 (268)
|++|++++++.+.+|.+..+
T Consensus 371 G~~LA~as~~Gv~lvrL~gf 390 (393)
T 4gq1_A 371 GSHLAIATEGSVLLTRLMGF 390 (393)
T ss_dssp SSEEEEEESSEEEEEEEGGG
T ss_pred CCEEEEEeCCCeEEEEEeCc
Confidence 99999888888998887554
No 121
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.97 E-value=3e-29 Score=218.15 Aligned_cols=209 Identities=19% Similarity=0.313 Sum_probs=175.3
Q ss_pred eeecEEeeecCCCeeeEEEecCCCCCc-EEEEEeCCCCeEEeeCCCCCe-------EEEeeCccCcEEEEEecC-CCcEE
Q 024372 6 VAVPLVCHGHSRPVVDLFYSPITPDGF-FLVSASKDSSPMLRNGETGDW-------IGTFEGHKGAVWSCCLDA-NALFS 76 (268)
Q Consensus 6 ~~~~~~~~~h~~~v~~~~f~~~~~dg~-~l~s~s~d~~i~iw~~~~~~~-------~~~~~~h~~~V~~~~~~~-~~~~l 76 (268)
......+.+|..+|.+++|+| ++. +|++|+.|++|++|++.++.. ...+.+|...|.+++|+| ++.++
T Consensus 171 ~~~~~~~~~h~~~v~~l~~~~---~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l 247 (430)
T 2xyi_A 171 CQPDLRLRGHQKEGYGLSWNP---NLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLF 247 (430)
T ss_dssp CCCSEEEECCSSCCCCEEECT---TSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEE
T ss_pred CCCcEEecCCCCCeEEEEeCC---CCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEE
Confidence 455666789999999999996 555 999999999999999988432 456779999999999999 67889
Q ss_pred EEeeCCCcEEEEeCCCC---Ceeeee-ccCCeEEEEEECCCCC-EEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEE
Q 024372 77 ASGSADFTAKLWDALTG---DEKHSF-EHKHIVRACAFSEDTH-LLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTV 151 (268)
Q Consensus 77 ~s~s~D~~v~iw~~~~~---~~~~~~-~~~~~v~~v~~~~~~~-~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~ 151 (268)
++++.|+.|++||+.+. .....+ .|...|++++|+|+++ ++++|+.|+.|++||++........+..|.+.+.++
T Consensus 248 ~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i 327 (430)
T 2xyi_A 248 GSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQV 327 (430)
T ss_dssp EEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEE
T ss_pred EEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEE
Confidence 99999999999999876 344444 5888999999999886 789999999999999987555566776788999999
Q ss_pred EEeCCCCcEEEEeeCCCeEEEEeCCC--------------CceEEeecC-CCCEEEEEECCCCc-EEE-EeCCCeEEEEe
Q 024372 152 AWLHSDQTILSSCTDSGGVRLWDARS--------------GKIVQTLET-KSPVTSAEVSRDGR-YIT-TADGSSVKFWD 214 (268)
Q Consensus 152 ~~~~~~~~~~~~~~~d~~i~iwd~~~--------------~~~~~~~~~-~~~v~~~~~s~~g~-~l~-~~~~~~v~~wd 214 (268)
+|+|++..++++++.|+.|+|||++. .+.+..+.. ...+.+++|+|++. +++ ++.|+.|++|+
T Consensus 328 ~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~ 407 (430)
T 2xyi_A 328 QWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQ 407 (430)
T ss_dssp EECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEE
T ss_pred EECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeE
Confidence 99999888888888899999999987 245555554 45699999999998 555 46789999999
Q ss_pred CCC
Q 024372 215 ANH 217 (268)
Q Consensus 215 ~~~ 217 (268)
+..
T Consensus 408 ~~~ 410 (430)
T 2xyi_A 408 MAE 410 (430)
T ss_dssp ECH
T ss_pred ccc
Confidence 864
No 122
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.1e-30 Score=227.81 Aligned_cols=190 Identities=13% Similarity=0.076 Sum_probs=156.3
Q ss_pred ecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccC-----cEEEEEecCCCcEEEEeeCCCcEEEE
Q 024372 14 GHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKG-----AVWSCCLDANALFSASGSADFTAKLW 88 (268)
Q Consensus 14 ~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~-----~V~~~~~~~~~~~l~s~s~D~~v~iw 88 (268)
+|...|.+++|+| ||++||+++.||++++|+... ++..+. |.. .|.+++|+|+|++||+|+.||+|++|
T Consensus 83 ~~~~~V~~vawSP---dG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIW 156 (588)
T 2j04_A 83 QPVCYPRVCKPSP---IDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFF 156 (588)
T ss_dssp SCSCCEEEEEECS---SSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEE
T ss_pred CCCCcEEEEEECC---CCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEE
Confidence 6788999999995 999999999999999999644 777788 766 49999999999999999999999999
Q ss_pred eCCCCCe-------eeee-----ccCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCC--CeEe-cCCcccEEEEEE
Q 024372 89 DALTGDE-------KHSF-----EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAP--PREV-GNSSGSIRTVAW 153 (268)
Q Consensus 89 ~~~~~~~-------~~~~-----~~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~--~~~~-~~~~~~v~~~~~ 153 (268)
|+.++.. ..++ .|...|.+++|+|++ +++++.|+.+++||+...... .+.+ ..|...|.+++|
T Consensus 157 d~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaF 234 (588)
T 2j04_A 157 SIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKI 234 (588)
T ss_dssp ECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEE
T ss_pred ECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEE
Confidence 9988752 3443 366789999999999 788899999999998765432 1233 467788999999
Q ss_pred eCCCCcEEEEeeCCCeEEEEeCCCCce-EEeecCCCCEEEEEE--CCCCcEEEEeC-CCeEEEEeCC
Q 024372 154 LHSDQTILSSCTDSGGVRLWDARSGKI-VQTLETKSPVTSAEV--SRDGRYITTAD-GSSVKFWDAN 216 (268)
Q Consensus 154 ~~~~~~~~~~~~~d~~i~iwd~~~~~~-~~~~~~~~~v~~~~~--s~~g~~l~~~~-~~~v~~wd~~ 216 (268)
+ +. .++++++ ++|++||+.+++. ...+.+...+..+++ +|++..++++. +++ ++|...
T Consensus 235 s--g~-~LASa~~-~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 235 V--DY-KVVLTCP-GYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp E--TT-EEEEECS-SEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS
T ss_pred E--CC-EEEEEeC-CeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec
Confidence 8 44 4555554 9999999998887 444566778999999 99998887764 788 999975
No 123
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=1.3e-28 Score=204.46 Aligned_cols=229 Identities=10% Similarity=0.028 Sum_probs=159.0
Q ss_pred cCCCCCcEEEEEeCCCCeEEeeCCCC---CeEEEeeCccCcE-------------------------EEEEecCC----C
Q 024372 26 PITPDGFFLVSASKDSSPMLRNGETG---DWIGTFEGHKGAV-------------------------WSCCLDAN----A 73 (268)
Q Consensus 26 ~~~~dg~~l~s~s~d~~i~iw~~~~~---~~~~~~~~h~~~V-------------------------~~~~~~~~----~ 73 (268)
+...-...++...-..+|++|+..++ ++++++..|+.+| ++++++|+ +
T Consensus 48 ~~~~~~~~~~~~~~~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~ 127 (356)
T 2w18_A 48 ERAGCKEPCIITACEDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEK 127 (356)
T ss_dssp C----CEEEEEEEESSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CC
T ss_pred ccCCCCccEEEEeccceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccc
Confidence 43333445666666788999999999 8899999988654 55666777 7
Q ss_pred cEEEEeeC--------------------CCcEEEEeCCC-CCeeeee-ccCCeEEEEEECC---CCCEEEEeeCCCeEEE
Q 024372 74 LFSASGSA--------------------DFTAKLWDALT-GDEKHSF-EHKHIVRACAFSE---DTHLLLTGGFEKILRI 128 (268)
Q Consensus 74 ~~l~s~s~--------------------D~~v~iw~~~~-~~~~~~~-~~~~~v~~v~~~~---~~~~l~s~~~d~~i~~ 128 (268)
+++++++. |++|++|++.. ++.+... .|+..++.++|++ ++..|++|+.|++||+
T Consensus 128 ~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkI 207 (356)
T 2w18_A 128 QVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVI 207 (356)
T ss_dssp EEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEE
T ss_pred cEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEE
Confidence 77777653 77788888743 5444433 4666777788887 6689999999999999
Q ss_pred EECCCCCCCCeEecCC--cccEEEEEEeCCCCcE-----------EEEeeCCCeEEEEeCCCCceEEeec-----CC-CC
Q 024372 129 FDLNRPDAPPREVGNS--SGSIRTVAWLHSDQTI-----------LSSCTDSGGVRLWDARSGKIVQTLE-----TK-SP 189 (268)
Q Consensus 129 ~d~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~-----------~~~~~~d~~i~iwd~~~~~~~~~~~-----~~-~~ 189 (268)
||+.+++.......++ ...+.+++|+|++..+ +++|+.|++|++||+.+++++..+. .+ ..
T Consensus 208 WDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~ 287 (356)
T 2w18_A 208 WNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGR 287 (356)
T ss_dssp EETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCC
T ss_pred EECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcce
Confidence 9998876433333222 2356777898877544 3677888999999999999887652 22 22
Q ss_pred EEEEEECCCCcEEEE-eCCCeEEEEeCCCceeeeEEeCCCC-cee-eEEcCCCCCEEEeccCCCeEEEEEC
Q 024372 190 VTSAEVSRDGRYITT-ADGSSVKFWDANHFGLVKGYNMPCN-TES-ASLEPKLGNIFIAGGEDMWVHVFDF 257 (268)
Q Consensus 190 v~~~~~s~~g~~l~~-~~~~~v~~wd~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~gs~d~~i~~wd~ 257 (268)
+.+..+ ++.++++ +.|++|+|||+.+++++.++..+.. ... ++|+| +|++|++|+.|++|++||+
T Consensus 288 ~lsg~~--sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSP-DG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 288 FLEGDV--KDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSG-TDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EEEEEE--ETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECS-SSSEEEEECTTSCEEEEEE
T ss_pred eEcccc--CCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECC-CCCEEEEEECCCcEEEecC
Confidence 333333 3666665 4689999999999999999875543 343 57777 7999999999999999995
No 124
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.97 E-value=4.1e-28 Score=204.82 Aligned_cols=217 Identities=14% Similarity=0.216 Sum_probs=168.1
Q ss_pred eeCCCCCeEEEeeCccCcEEEEEecCC---CcEEEEeeCCCcEEEEeCCC-CCee-eee-ccCCeEEEEEECCCCCEEEE
Q 024372 46 RNGETGDWIGTFEGHKGAVWSCCLDAN---ALFSASGSADFTAKLWDALT-GDEK-HSF-EHKHIVRACAFSEDTHLLLT 119 (268)
Q Consensus 46 w~~~~~~~~~~~~~h~~~V~~~~~~~~---~~~l~s~s~D~~v~iw~~~~-~~~~-~~~-~~~~~v~~v~~~~~~~~l~s 119 (268)
++....+.+..+.+|.+.|.+++|+|+ +.+|++|+.|+.|++||+.+ +... ..+ .|...|.+++|+|+++.|++
T Consensus 24 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 103 (368)
T 3mmy_A 24 DNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFT 103 (368)
T ss_dssp CSSCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEE
T ss_pred CCCCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEE
Confidence 445566778889999999999999999 59999999999999999987 4443 333 48899999999999999999
Q ss_pred eeCCCeEEEEECCCCCCCCeEecCCcccEEEEEE--eCCCCcEEEEeeCCCeEEEEeCCCCceEEeecCCCC--------
Q 024372 120 GGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAW--LHSDQTILSSCTDSGGVRLWDARSGKIVQTLETKSP-------- 189 (268)
Q Consensus 120 ~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~-------- 189 (268)
++.|+.|++||++++.. .....|.+.+.+++| .+++ .++++++.|+.|++||+++++.+..+..+..
T Consensus 104 ~~~dg~v~iwd~~~~~~--~~~~~~~~~v~~~~~~~~~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 180 (368)
T 3mmy_A 104 ASCDKTAKMWDLSSNQA--IQIAQHDAPVKTIHWIKAPNY-SCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIY 180 (368)
T ss_dssp EETTSEEEEEETTTTEE--EEEEECSSCEEEEEEEECSSC-EEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEET
T ss_pred EcCCCcEEEEEcCCCCc--eeeccccCceEEEEEEeCCCC-CEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecC
Confidence 99999999999986542 234457889999999 5544 5666778889999999999887766654332
Q ss_pred ----------------------------------EEEEEECCCCc-----EEEEeCCCeEEEEeCCCc---eeeeEEeCC
Q 024372 190 ----------------------------------VTSAEVSRDGR-----YITTADGSSVKFWDANHF---GLVKGYNMP 227 (268)
Q Consensus 190 ----------------------------------v~~~~~s~~g~-----~l~~~~~~~v~~wd~~~~---~~~~~~~~~ 227 (268)
..++.+.++.. +++++.++.|++||++.. ..+..+..+
T Consensus 181 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~ 260 (368)
T 3mmy_A 181 PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCH 260 (368)
T ss_dssp TEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECS
T ss_pred CeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeee
Confidence 23333333322 445667899999999875 344455443
Q ss_pred C-------------CceeeEEcCCCCCEEEeccCCCeEEEEECCCCcEEeec
Q 024372 228 C-------------NTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIAIT 266 (268)
Q Consensus 228 ~-------------~~~~~~~~~~~~~~~~~gs~d~~i~~wd~~~g~~~~~~ 266 (268)
. .+..++++| ++++|++|+.|+.|++||+.+++++..+
T Consensus 261 ~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 311 (368)
T 3mmy_A 261 RSNGTNTSAPQDIYAVNGIAFHP-VHGTLATVGSDGRFSFWDKDARTKLKTS 311 (368)
T ss_dssp EEC----CCCEEECCEEEEEECT-TTCCEEEEETTSCEEEEETTTTEEEEEC
T ss_pred ecccccccccccccceEEEEEec-CCCEEEEEccCCeEEEEECCCCcEEEEe
Confidence 3 355677777 6899999999999999999999887764
No 125
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.8e-28 Score=227.25 Aligned_cols=211 Identities=18% Similarity=0.235 Sum_probs=173.1
Q ss_pred eeecEEeeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCC--eEEEeeCccCcEEEEEecCC--CcEEEEeeC
Q 024372 6 VAVPLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGD--WIGTFEGHKGAVWSCCLDAN--ALFSASGSA 81 (268)
Q Consensus 6 ~~~~~~~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~--~~~~~~~h~~~V~~~~~~~~--~~~l~s~s~ 81 (268)
......+.+|.++|++++|+|. ++|++|++|+.|++|++||..+++ .+..+.+|...|.+++|+|+ +.++++|+.
T Consensus 43 ~~~~~~l~~h~~~V~~l~~s~~-~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~ 121 (753)
T 3jro_A 43 HKLIDTLTGHEGPVWRVDWAHP-KFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASS 121 (753)
T ss_dssp EEEEEEECCCSSCEEEEEECCT-TSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET
T ss_pred CccceeccCCcCceEEEEecCC-CCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeC
Confidence 3444556799999999999862 238999999999999999999987 77888999999999999999 999999999
Q ss_pred CCcEEEEeCCCCCe---eeeeccCCeEEEEEECC-------------CCCEEEEeeCCCeEEEEECCCCCCC---CeEec
Q 024372 82 DFTAKLWDALTGDE---KHSFEHKHIVRACAFSE-------------DTHLLLTGGFEKILRIFDLNRPDAP---PREVG 142 (268)
Q Consensus 82 D~~v~iw~~~~~~~---~~~~~~~~~v~~v~~~~-------------~~~~l~s~~~d~~i~~~d~~~~~~~---~~~~~ 142 (268)
|+.|++||+.++.. .....|...|.++.|+| +++.+++|+.|+.|++||++.+... .....
T Consensus 122 dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~ 201 (753)
T 3jro_A 122 DGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLE 201 (753)
T ss_dssp TSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEEC
T ss_pred CCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeec
Confidence 99999999987733 23335788999999999 5899999999999999998765322 23445
Q ss_pred CCcccEEEEEEeCCC--CcEEEEeeCCCeEEEEeCCCCce-----EEee-cCCCCEEEEEECCCCcEEEE-eCCCeEEEE
Q 024372 143 NSSGSIRTVAWLHSD--QTILSSCTDSGGVRLWDARSGKI-----VQTL-ETKSPVTSAEVSRDGRYITT-ADGSSVKFW 213 (268)
Q Consensus 143 ~~~~~v~~~~~~~~~--~~~~~~~~~d~~i~iwd~~~~~~-----~~~~-~~~~~v~~~~~s~~g~~l~~-~~~~~v~~w 213 (268)
.|.+.|.+++|+|++ +.++++++.||.|++||+++++. +... .+...+.+++|+|+|+++++ +.|+.|++|
T Consensus 202 ~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vw 281 (753)
T 3jro_A 202 GHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLW 281 (753)
T ss_dssp CCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECC
T ss_pred CCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEE
Confidence 688899999999984 56777888889999999998742 1111 24456899999999988776 468999999
Q ss_pred eCCC
Q 024372 214 DANH 217 (268)
Q Consensus 214 d~~~ 217 (268)
|++.
T Consensus 282 d~~~ 285 (753)
T 3jro_A 282 KENL 285 (753)
T ss_dssp BCCS
T ss_pred ecCC
Confidence 9874
No 126
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.96 E-value=4.3e-26 Score=197.59 Aligned_cols=248 Identities=14% Similarity=0.056 Sum_probs=188.0
Q ss_pred EEeeecCCCeeeEEEecC-----------CCCCcEEEEEeCC------CCeEEeeCCCCCeEEEeeCccCcEEEEEecCC
Q 024372 10 LVCHGHSRPVVDLFYSPI-----------TPDGFFLVSASKD------SSPMLRNGETGDWIGTFEGHKGAVWSCCLDAN 72 (268)
Q Consensus 10 ~~~~~h~~~v~~~~f~~~-----------~~dg~~l~s~s~d------~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~ 72 (268)
..+.+|...+..+++++. .+.+..++.++.+ ++|++||.. ++....+.+|.+.|.+++|+|+
T Consensus 111 ~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~-g~~~~~l~~~~~~v~~~~~Spd 189 (415)
T 2hqs_A 111 NSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYD-GYNQFVVHRSPQPLMSPAWSPD 189 (415)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETT-SCSCEEEEEESSCEEEEEECTT
T ss_pred eEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCC-CCCCEEEeCCCCcceeeEEcCC
Confidence 446688888887777641 1125567777665 789999997 4456678889999999999999
Q ss_pred CcEEEEeeCCC---cEEEEeCCCCCeeeeeccCCeEEEEEECCCCCEEE-EeeCCC--eEEEEECCCCCCCCeEecCCcc
Q 024372 73 ALFSASGSADF---TAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLL-TGGFEK--ILRIFDLNRPDAPPREVGNSSG 146 (268)
Q Consensus 73 ~~~l~s~s~D~---~v~iw~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~-s~~~d~--~i~~~d~~~~~~~~~~~~~~~~ 146 (268)
++++++++.|+ .|++||+.+++......+...+.+++|+|+++.|+ +++.++ .|++||+.+++ ...+..+.+
T Consensus 190 g~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~--~~~l~~~~~ 267 (415)
T 2hqs_A 190 GSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ--IRQVTDGRS 267 (415)
T ss_dssp SSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC--EEECCCCSS
T ss_pred CCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCC--EEeCcCCCC
Confidence 99999999885 99999999998876666888899999999999777 666555 48999987653 244555667
Q ss_pred cEEEEEEeCCCCcEEEEeeCCC--eEEEEeCCCCceEEeecCCCCEEEEEECCCCcEEEEe-C---CCeEEEEeCCCcee
Q 024372 147 SIRTVAWLHSDQTILSSCTDSG--GVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYITTA-D---GSSVKFWDANHFGL 220 (268)
Q Consensus 147 ~v~~~~~~~~~~~~~~~~~~d~--~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~-~---~~~v~~wd~~~~~~ 220 (268)
.+.+++|+|++..++.++.+++ .|.+||+.+++......+...+.+++|+|+|++|+.+ . +..|.+||+.+.+.
T Consensus 268 ~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~ 347 (415)
T 2hqs_A 268 NNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV 347 (415)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE
T ss_pred cccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE
Confidence 8999999999887776665445 6888899988755433344568899999999988654 2 25899999988765
Q ss_pred eeEEeCCCCceeeEEcCCCCCEEEeccCCC---eEEEEECCCCcE
Q 024372 221 VKGYNMPCNTESASLEPKLGNIFIAGGEDM---WVHVFDFHTGEQ 262 (268)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~gs~d~---~i~~wd~~~g~~ 262 (268)
.. +..........++| +|++|+.++.|+ .|++||+..++.
T Consensus 348 ~~-l~~~~~~~~~~~sp-dg~~l~~~s~~~~~~~l~~~d~~g~~~ 390 (415)
T 2hqs_A 348 QV-LSSTFLDETPSLAP-NGTMVIYSSSQGMGSVLNLVSTDGRFK 390 (415)
T ss_dssp EE-CCCSSSCEEEEECT-TSSEEEEEEEETTEEEEEEEETTSCCE
T ss_pred EE-ecCCCCcCCeEEcC-CCCEEEEEEcCCCccEEEEEECCCCcE
Confidence 33 33333556777777 699999888776 899999875443
No 127
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.96 E-value=8.8e-27 Score=197.79 Aligned_cols=212 Identities=10% Similarity=0.138 Sum_probs=147.4
Q ss_pred EeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCCCcEEEEeCCCCCeeeeeccCCeEEEEEECCCCCEE-EEeeCC
Q 024372 45 LRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLL-LTGGFE 123 (268)
Q Consensus 45 iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~v~~v~~~~~~~~l-~s~~~d 123 (268)
+|+..+.+.+.++..|.+.|.+++|+|++.++++|+.|+ +++|++.+........+. .+..+.+.++++.+ ++++.|
T Consensus 3 i~s~~~~~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d 80 (355)
T 3vu4_A 3 LGSMITRNPIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEMR-HLSKVRMLHRTNYVAFVTGVK 80 (355)
T ss_dssp ----------------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEECS-CCCEEEECTTSSEEEEECSST
T ss_pred cccccccCCccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeecC-CeEEEEEcCCCCEEEEEECCc
Confidence 456666777777889999999999999999999988775 789999877665554433 47778888888777 567888
Q ss_pred CeEEEEECCCCCCCCeEecCCcccEEEEEEeCCC-----------------------------------CcEEEE-eeCC
Q 024372 124 KILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSD-----------------------------------QTILSS-CTDS 167 (268)
Q Consensus 124 ~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~-----------------------------------~~~~~~-~~~d 167 (268)
+.|++||+.+++.. .... +...+.++.++++. ..++++ ++.+
T Consensus 81 ~~v~iWd~~~~~~~-~~~~-~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~ 158 (355)
T 3vu4_A 81 EVVHIWDDVKKQDV-SRIK-VDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNL 158 (355)
T ss_dssp TEEEEEETTTTEEE-EEEE-CSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCT
T ss_pred cEEEEEECCCCcEE-EEEE-CCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcC
Confidence 99999998765432 2222 34466666665421 122222 5677
Q ss_pred CeEEEEeCCCCc----------------eEEeec-CCCCEEEEEECCCCcEEEE-eCCCe-EEEEeCCCceeeeEEe---
Q 024372 168 GGVRLWDARSGK----------------IVQTLE-TKSPVTSAEVSRDGRYITT-ADGSS-VKFWDANHFGLVKGYN--- 225 (268)
Q Consensus 168 ~~i~iwd~~~~~----------------~~~~~~-~~~~v~~~~~s~~g~~l~~-~~~~~-v~~wd~~~~~~~~~~~--- 225 (268)
|.|++||+++++ ++..+. +..+|.+++|+|+|++|++ +.|++ |++||+++++++..+.
T Consensus 159 g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~ 238 (355)
T 3vu4_A 159 GQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGL 238 (355)
T ss_dssp TCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTT
T ss_pred cEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC
Confidence 899999998765 145555 4567999999999998876 56888 9999999999998887
Q ss_pred CCCCceeeEEcCCCCCEEEeccCCCeEEEEECCCCc
Q 024372 226 MPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGE 261 (268)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~gs~d~~i~~wd~~~g~ 261 (268)
+...+..++++| ++++|++|+.|+.|++||+.++.
T Consensus 239 h~~~v~~~~~s~-~~~~l~s~s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 239 DRADVVDMKWST-DGSKLAVVSDKWTLHVFEIFNDQ 273 (355)
T ss_dssp CCSCEEEEEECT-TSCEEEEEETTCEEEEEESSCCS
T ss_pred CCCcEEEEEECC-CCCEEEEEECCCEEEEEEccCCC
Confidence 344566777777 69999999999999999997653
No 128
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.95 E-value=2.7e-25 Score=198.63 Aligned_cols=235 Identities=13% Similarity=0.162 Sum_probs=187.7
Q ss_pred CCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCCCcEEEEeC--CCCCeeeeeccCCeEE
Q 024372 29 PDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDA--LTGDEKHSFEHKHIVR 106 (268)
Q Consensus 29 ~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw~~--~~~~~~~~~~~~~~v~ 106 (268)
|++.++++++.|++|.+||..+++++.++..+.. +..++|+|+++++++++.|++|++||+ .+++.+..+.+...++
T Consensus 147 p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~~p~ 225 (543)
T 1nir_A 147 LPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEAR 225 (543)
T ss_dssp GGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEE
T ss_pred CCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCCCcc
Confidence 4889999999999999999999999999984333 889999999999999999999999999 8888888888888889
Q ss_pred EEEECC----CCCEEEEee-CCCeEEEEECCCCCCCCeEecC-----------CcccEEEEEEeCCCCcEEEEeeCCCeE
Q 024372 107 ACAFSE----DTHLLLTGG-FEKILRIFDLNRPDAPPREVGN-----------SSGSIRTVAWLHSDQTILSSCTDSGGV 170 (268)
Q Consensus 107 ~v~~~~----~~~~l~s~~-~d~~i~~~d~~~~~~~~~~~~~-----------~~~~v~~~~~~~~~~~~~~~~~~d~~i 170 (268)
.++|+| +++++++++ .+++|.+||..+.+.. ..+.. ....+..+.++|++..++++..++++|
T Consensus 226 ~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~-~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i 304 (543)
T 1nir_A 226 SVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPK-QIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKV 304 (543)
T ss_dssp EEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEE-EEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEE
T ss_pred eEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccc-eeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeE
Confidence 999999 999999988 4899999998765432 22211 223678899999888888888889999
Q ss_pred EEEeCCCCceEE--eecCCCCEEEEEECCCCcEEE-Ee-CCCeEEEEeCCCceeeeEEeCC---CCceeeE-EcCCCCCE
Q 024372 171 RLWDARSGKIVQ--TLETKSPVTSAEVSRDGRYIT-TA-DGSSVKFWDANHFGLVKGYNMP---CNTESAS-LEPKLGNI 242 (268)
Q Consensus 171 ~iwd~~~~~~~~--~~~~~~~v~~~~~s~~g~~l~-~~-~~~~v~~wd~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~ 242 (268)
.+||+.+.+.+. .+.....+..+.|+|+|+++. ++ .+++|.+||+.+++++..+... ....... ++|+.+..
T Consensus 305 ~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~ 384 (543)
T 1nir_A 305 LLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPV 384 (543)
T ss_dssp EEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEE
T ss_pred EEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccE
Confidence 999998876544 555555577899999999765 43 4689999999999988877642 1111222 34545777
Q ss_pred EEecc-CCCeEEEEECCC-------CcEEee
Q 024372 243 FIAGG-EDMWVHVFDFHT-------GEQIAI 265 (268)
Q Consensus 243 ~~~gs-~d~~i~~wd~~~-------g~~~~~ 265 (268)
+++++ .|+.|.+||+.+ ++.+..
T Consensus 385 ~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~ 415 (543)
T 1nir_A 385 WSTSHLGDGSISLIGTDPKNHPQYAWKKVAE 415 (543)
T ss_dssp EEEEBSSSSEEEEEECCTTTCTTTBTSEEEE
T ss_pred EEeccCCCceEEEEEeCCCCCchhcCeEEEE
Confidence 88876 689999999987 666554
No 129
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.94 E-value=3.1e-24 Score=179.41 Aligned_cols=244 Identities=11% Similarity=0.043 Sum_probs=181.8
Q ss_pred eecCCCeeeEEEecCCCCCcEEEEEeC-CCCeEEeeCCCCCe-EEEeeCccCcEEEEEecCCCcEEEEeeCC-C--cEEE
Q 024372 13 HGHSRPVVDLFYSPITPDGFFLVSASK-DSSPMLRNGETGDW-IGTFEGHKGAVWSCCLDANALFSASGSAD-F--TAKL 87 (268)
Q Consensus 13 ~~h~~~v~~~~f~~~~~dg~~l~s~s~-d~~i~iw~~~~~~~-~~~~~~h~~~V~~~~~~~~~~~l~s~s~D-~--~v~i 87 (268)
..+..++ .++|+| +|++|++++. ++.+.+||..+++. ...+..+..+...++|+|++++++++..+ + .|++
T Consensus 37 ~~~~~~~-~~~~s~---dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v 112 (331)
T 3u4y_A 37 TLGYDFV-DTAITS---DCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQS 112 (331)
T ss_dssp ECCCCEE-EEEECS---SSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEE
T ss_pred EccCCcc-eEEEcC---CCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEE
Confidence 3445556 899985 8886766666 88999999999998 77787777777669999999988855555 3 8999
Q ss_pred EeCCCCCeeeeeccCCeEEEEEECCCCCEEE-EeeCCCe-EEEEECCCCCCCC---eEecCCcccEEEEEEeCCCCcEEE
Q 024372 88 WDALTGDEKHSFEHKHIVRACAFSEDTHLLL-TGGFEKI-LRIFDLNRPDAPP---REVGNSSGSIRTVAWLHSDQTILS 162 (268)
Q Consensus 88 w~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~-s~~~d~~-i~~~d~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~~ 162 (268)
||+.+++....+........++|+|+++.++ +...++. +.+|++....... ............++|+|++..+++
T Consensus 113 ~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v 192 (331)
T 3u4y_A 113 YSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFV 192 (331)
T ss_dssp EETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEE
T ss_pred EECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEE
Confidence 9999998888887777778999999998555 4456577 9999987433221 111122345788999999887888
Q ss_pred EeeCCCeEEEEeCCCCce---EEeecCCCCEEEEEECCCCcEEEEe--CCCeEEEEeCCCcee--eeEEeCC----CCc-
Q 024372 163 SCTDSGGVRLWDARSGKI---VQTLETKSPVTSAEVSRDGRYITTA--DGSSVKFWDANHFGL--VKGYNMP----CNT- 230 (268)
Q Consensus 163 ~~~~d~~i~iwd~~~~~~---~~~~~~~~~v~~~~~s~~g~~l~~~--~~~~v~~wd~~~~~~--~~~~~~~----~~~- 230 (268)
++..++.|++||+++++. +..+.....+..++|+|+|+++..+ .++.|.+||+.+.+. +..+... ...
T Consensus 193 ~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 272 (331)
T 3u4y_A 193 ANLIGNSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPL 272 (331)
T ss_dssp EETTTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGG
T ss_pred EeCCCCeEEEEECCCCcccceeeeccCCCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCc
Confidence 877789999999999988 7777776778899999999976543 357899999988766 4443322 111
Q ss_pred ---eeeEEcCCCCCEEE-eccCCCeEEEEECCCCc
Q 024372 231 ---ESASLEPKLGNIFI-AGGEDMWVHVFDFHTGE 261 (268)
Q Consensus 231 ---~~~~~~~~~~~~~~-~gs~d~~i~~wd~~~g~ 261 (268)
..+.+++ ++++++ ++..++.|++||+.+.+
T Consensus 273 ~~~~~~~~sp-dg~~l~v~~~~~~~v~v~d~~~~~ 306 (331)
T 3u4y_A 273 FGANQMALNK-TETKLFISANISRELKVFTISGKV 306 (331)
T ss_dssp TTCCCEEECT-TSSEEEEEETTTTEEEEEETTSCE
T ss_pred ccccceEECC-CCCEEEEecCCCCcEEEEEecCCc
Confidence 1247777 577665 55667799999997544
No 130
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.94 E-value=7.4e-24 Score=189.37 Aligned_cols=238 Identities=12% Similarity=0.103 Sum_probs=186.7
Q ss_pred eeeEEEecCCCCCcEEEEEeCCCCeEEeeC--CCCCeEEEeeCccCcEEEEEecC----CCcEEEEee-CCCcEEEEeCC
Q 024372 19 VVDLFYSPITPDGFFLVSASKDSSPMLRNG--ETGDWIGTFEGHKGAVWSCCLDA----NALFSASGS-ADFTAKLWDAL 91 (268)
Q Consensus 19 v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~--~~~~~~~~~~~h~~~V~~~~~~~----~~~~l~s~s-~D~~v~iw~~~ 91 (268)
+..++|+| ||++|++++.|++|.+||. .+++.+.++.. ...++.++|+| +++++++++ .+++|.+||..
T Consensus 181 ~~~v~~sp---dg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~-g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~ 256 (543)
T 1nir_A 181 VHISRMSA---SGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI-GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGE 256 (543)
T ss_dssp EEEEEECT---TSCEEEEEETTSEEEEEETTSSSCEEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETT
T ss_pred cceEEECC---CCCEEEEECCCCeEEEEECcCCCCcEEEEEec-CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEecc
Confidence 88899985 9999999999999999999 88999999984 45679999999 999998887 58999999999
Q ss_pred CCCeeeeecc-----------CC-eEEEEEECCCCC-EEEEeeCCCeEEEEECCCCCCCCe-EecCCcccEEEEEEeCCC
Q 024372 92 TGDEKHSFEH-----------KH-IVRACAFSEDTH-LLLTGGFEKILRIFDLNRPDAPPR-EVGNSSGSIRTVAWLHSD 157 (268)
Q Consensus 92 ~~~~~~~~~~-----------~~-~v~~v~~~~~~~-~l~s~~~d~~i~~~d~~~~~~~~~-~~~~~~~~v~~~~~~~~~ 157 (268)
+++++..+.. .. .+..+.++|++. ++++...++.|.+||..+.+.... .+ .+......+.|+|++
T Consensus 257 t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i-~~~~~~~~~~~spdg 335 (543)
T 1nir_A 257 TLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSI-GAAPFLHDGGWDSSH 335 (543)
T ss_dssp TCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEE-ECCSSCCCEEECTTS
T ss_pred ccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEe-ccCcCccCceECCCC
Confidence 9988777642 22 578899999665 556677889999999876543321 22 233456678999999
Q ss_pred CcEEEEeeCCCeEEEEeCCCCceEEeecC----C-CCEEEEEECCC-CcEEEEe--CCCeEEEEeCCC-------ceeee
Q 024372 158 QTILSSCTDSGGVRLWDARSGKIVQTLET----K-SPVTSAEVSRD-GRYITTA--DGSSVKFWDANH-------FGLVK 222 (268)
Q Consensus 158 ~~~~~~~~~d~~i~iwd~~~~~~~~~~~~----~-~~v~~~~~s~~-g~~l~~~--~~~~v~~wd~~~-------~~~~~ 222 (268)
..+++++..+++|.+||+++++++.++.. + .....+ ++|+ |.+++++ .+++|.+||+.+ +++++
T Consensus 336 ~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~ 414 (543)
T 1nir_A 336 RYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVA 414 (543)
T ss_dssp CEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEE
T ss_pred CEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEE
Confidence 88888887789999999999999887763 2 222232 5787 5656665 468999999988 88899
Q ss_pred EEeCCCC-ceeeEEcCCCCCEEEecc-------CCCeEEEEECCCCcEE
Q 024372 223 GYNMPCN-TESASLEPKLGNIFIAGG-------EDMWVHVFDFHTGEQI 263 (268)
Q Consensus 223 ~~~~~~~-~~~~~~~~~~~~~~~~gs-------~d~~i~~wd~~~g~~~ 263 (268)
++..+.. ...+.++| ++++|++++ .+..|.+||+.+++.+
T Consensus 415 ~l~~~g~~~~~v~~~p-dg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~ 462 (543)
T 1nir_A 415 ELQGQGGGSLFIKTHP-KSSHLYVDTTFNPDARISQSVAVFDLKNLDAK 462 (543)
T ss_dssp EEECSCSCCCCEECCT-TCCEEEECCTTCSSHHHHTCEEEEETTCTTSC
T ss_pred EEEcCCCCceEEEcCC-CCCcEEEecCCCCCcccCceEEEEECCCCCCC
Confidence 9987654 35566666 688888887 2679999999988765
No 131
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.94 E-value=1.8e-23 Score=174.98 Aligned_cols=245 Identities=14% Similarity=0.143 Sum_probs=176.6
Q ss_pred eecCCCeeeEEEecCCCCCcEEEEEeCC-CCeEEeeCC--CCC--eEEEeeCccCcEEEEEecCCCcEEEEee-CCCcEE
Q 024372 13 HGHSRPVVDLFYSPITPDGFFLVSASKD-SSPMLRNGE--TGD--WIGTFEGHKGAVWSCCLDANALFSASGS-ADFTAK 86 (268)
Q Consensus 13 ~~h~~~v~~~~f~~~~~dg~~l~s~s~d-~~i~iw~~~--~~~--~~~~~~~h~~~V~~~~~~~~~~~l~s~s-~D~~v~ 86 (268)
..|...+.+++|+| +|++|++++.+ +.+.+|++. +++ .+..+..+. .+..++|+|++.+++.++ .++.|+
T Consensus 34 ~~~~~~~~~~~~sp---dg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~ 109 (343)
T 1ri6_A 34 VDVPGQVQPMVVSP---DKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVS 109 (343)
T ss_dssp EECSSCCCCEEECT---TSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEE
T ss_pred EecCCCCceEEECC---CCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEE
Confidence 46888899999985 89989988887 899999987 565 345565544 788899999999776555 588999
Q ss_pred EEeCC---CCCeeeeeccCCeEEEEEECCCCCEEEEee-CCCeEEEEECCC-CCCCC----eEecCCcccEEEEEEeCCC
Q 024372 87 LWDAL---TGDEKHSFEHKHIVRACAFSEDTHLLLTGG-FEKILRIFDLNR-PDAPP----REVGNSSGSIRTVAWLHSD 157 (268)
Q Consensus 87 iw~~~---~~~~~~~~~~~~~v~~v~~~~~~~~l~s~~-~d~~i~~~d~~~-~~~~~----~~~~~~~~~v~~~~~~~~~ 157 (268)
+||+. .......+.....+..++|+|+++.+++++ .++.+++||+.. +.... .........+..++|+|++
T Consensus 110 ~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg 189 (343)
T 1ri6_A 110 VTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNE 189 (343)
T ss_dssp EEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTS
T ss_pred EEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCC
Confidence 99994 333444455555688899999999888777 899999999975 32111 1111233467789999988
Q ss_pred CcEEEEeeCCCeEEEEeCCC--Cce--EEee---cC----CCCEEEEEECCCCcEEE-Ee-CCCeEEEEeCC----Ccee
Q 024372 158 QTILSSCTDSGGVRLWDARS--GKI--VQTL---ET----KSPVTSAEVSRDGRYIT-TA-DGSSVKFWDAN----HFGL 220 (268)
Q Consensus 158 ~~~~~~~~~d~~i~iwd~~~--~~~--~~~~---~~----~~~v~~~~~s~~g~~l~-~~-~~~~v~~wd~~----~~~~ 220 (268)
..+++++..++.|++||+.. ++. ...+ .. ...+..++|+|+|++++ +. .++.|++||+. ..+.
T Consensus 190 ~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~ 269 (343)
T 1ri6_A 190 QYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSK 269 (343)
T ss_dssp SEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEE
T ss_pred CEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEE
Confidence 87777776779999999953 432 2222 21 23467899999998775 44 57899999997 3344
Q ss_pred eeEEeCCCCceeeEEcCCCCCEEEecc-CCCeEEEEE--CCCCcE
Q 024372 221 VKGYNMPCNTESASLEPKLGNIFIAGG-EDMWVHVFD--FHTGEQ 262 (268)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~gs-~d~~i~~wd--~~~g~~ 262 (268)
+..+.....+..+.+++ +++++++++ .|+.|.+|+ .++|+.
T Consensus 270 ~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~v~v~~~d~~~g~~ 313 (343)
T 1ri6_A 270 EGFQPTETQPRGFNVDH-SGKYLIAAGQKSHHISVYEIVGEQGLL 313 (343)
T ss_dssp EEEEECSSSCCCEEECT-TSSEEEEECTTTCEEEEEEEETTTTEE
T ss_pred eeeecCCCccceEEECC-CCCEEEEecCCCCeEEEEEEcCCCcee
Confidence 55555544566778877 577666665 689999994 446653
No 132
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.94 E-value=2.2e-23 Score=180.53 Aligned_cols=223 Identities=10% Similarity=0.091 Sum_probs=172.4
Q ss_pred ecEEeeecCCCeeeEEEecCCCCCcEEEEEeCCC---CeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEE-EeeCCC
Q 024372 8 VPLVCHGHSRPVVDLFYSPITPDGFFLVSASKDS---SPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSA-SGSADF 83 (268)
Q Consensus 8 ~~~~~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~---~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~-s~s~D~ 83 (268)
.+..+.+|...|.+++|+| ||++|++++.|+ +|++||+.+++.. .+..|.+.+.+++|+|++++|+ +++.|+
T Consensus 170 ~~~~l~~~~~~v~~~~~Sp---dg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g 245 (415)
T 2hqs_A 170 NQFVVHRSPQPLMSPAWSP---DGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTG 245 (415)
T ss_dssp SCEEEEEESSCEEEEEECT---TSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTS
T ss_pred CCEEEeCCCCcceeeEEcC---CCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCC
Confidence 4566778999999999985 999999999886 8999999999875 5777889999999999999877 777665
Q ss_pred c--EEEEeCCCCCeeeeeccCCeEEEEEECCCCCEEEEeeC-CC--eEEEEECCCCCCCCeEecCCcccEEEEEEeCCCC
Q 024372 84 T--AKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGF-EK--ILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQ 158 (268)
Q Consensus 84 ~--v~iw~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~s~~~-d~--~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 158 (268)
. |++||+.+++......+...+..++|+|+++.|++++. ++ .|.+||+.++. ......+...+..++|+|++.
T Consensus 246 ~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~--~~~l~~~~~~~~~~~~spdG~ 323 (415)
T 2hqs_A 246 SLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGA--PQRITWEGSQNQDADVSSDGK 323 (415)
T ss_dssp SCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSC--CEECCCSSSEEEEEEECTTSS
T ss_pred CceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCC--EEEEecCCCcccCeEECCCCC
Confidence 5 99999998887665667788999999999998888775 44 67777887543 334444556788999999988
Q ss_pred cEEEEeeCC--CeEEEEeCCCCceEEeecCCCCEEEEEECCCCcEEEE-eCCC---eEEEEeCCCceeeeEEeCC-CCce
Q 024372 159 TILSSCTDS--GGVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYITT-ADGS---SVKFWDANHFGLVKGYNMP-CNTE 231 (268)
Q Consensus 159 ~~~~~~~~d--~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~-~~~~---~v~~wd~~~~~~~~~~~~~-~~~~ 231 (268)
.++.++.++ ..|++||+.+++... +..+..+.+++|+|+|++|+. +.++ .|.+||+... ..+.+..+ ....
T Consensus 324 ~l~~~~~~~g~~~i~~~d~~~~~~~~-l~~~~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~-~~~~l~~~~~~v~ 401 (415)
T 2hqs_A 324 FMVMVSSNGGQQHIAKQDLATGGVQV-LSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGR-FKARLPATDGQVK 401 (415)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEE-CCCSSSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSC-CEEECCCSSSEEE
T ss_pred EEEEEECcCCceEEEEEECCCCCEEE-ecCCCCcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCC-cEEEeeCCCCCCc
Confidence 777766653 489999999988754 443347899999999998764 3333 7999998743 34444443 3456
Q ss_pred eeEEcCC
Q 024372 232 SASLEPK 238 (268)
Q Consensus 232 ~~~~~~~ 238 (268)
..+++|.
T Consensus 402 ~~~~~~~ 408 (415)
T 2hqs_A 402 FPAWSPY 408 (415)
T ss_dssp EEEECCC
T ss_pred CCccccc
Confidence 6677663
No 133
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.93 E-value=1.8e-23 Score=174.47 Aligned_cols=228 Identities=14% Similarity=0.123 Sum_probs=177.7
Q ss_pred cEEEEEeCCCCeEEeeCCCCCeEEEeeCcc-C-cEEEEEecCCCcEE-EEeeCCCcEEEEeCCCCCeeeeeccCC-----
Q 024372 32 FFLVSASKDSSPMLRNGETGDWIGTFEGHK-G-AVWSCCLDANALFS-ASGSADFTAKLWDALTGDEKHSFEHKH----- 103 (268)
Q Consensus 32 ~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~-~-~V~~~~~~~~~~~l-~s~s~D~~v~iw~~~~~~~~~~~~~~~----- 103 (268)
++|++++.+++|.+||..+++.+..+.... . .+..++|+|++.++ ++++.++.|.+||+.+++....+....
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 479999999999999999999888886332 2 47789999999654 667778999999999988877665433
Q ss_pred -eEEEEEECCCCCEEEEee------------CCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEeeCCCeE
Q 024372 104 -IVRACAFSEDTHLLLTGG------------FEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGV 170 (268)
Q Consensus 104 -~v~~v~~~~~~~~l~s~~------------~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i 170 (268)
.+..++|+|+++.++++. .++.|.+||+.+++.. ..... ...+..++|+|++..++++ ++.|
T Consensus 82 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~-~~~~~-~~~~~~~~~s~dg~~l~~~---~~~i 156 (337)
T 1pby_B 82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRR-KAFEA-PRQITMLAWARDGSKLYGL---GRDL 156 (337)
T ss_dssp ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEE-EEEEC-CSSCCCEEECTTSSCEEEE---SSSE
T ss_pred ccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEE-EEEeC-CCCcceeEECCCCCEEEEe---CCeE
Confidence 567899999999888886 5799999998754322 22222 3356678899988776665 4789
Q ss_pred EEEeCCCCceEEeecCCC--------------------------------------------------------------
Q 024372 171 RLWDARSGKIVQTLETKS-------------------------------------------------------------- 188 (268)
Q Consensus 171 ~iwd~~~~~~~~~~~~~~-------------------------------------------------------------- 188 (268)
.+||+++++.+..+....
T Consensus 157 ~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~ 236 (337)
T 1pby_B 157 HVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREV 236 (337)
T ss_dssp EEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEE
T ss_pred EEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeec
Confidence 999999887765443211
Q ss_pred -----CEEEEEECCCCcEEEEeCCCeEEEEeCCCceeeeEEeCCCCceeeEEcCCCCCEEEeccCCCeEEEEECCCCcEE
Q 024372 189 -----PVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQI 263 (268)
Q Consensus 189 -----~v~~~~~s~~g~~l~~~~~~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~d~~i~~wd~~~g~~~ 263 (268)
.+.+++++|+|+++.++ ++.|.+||+.+.+.+..+.....+..+.+++ +++++++++.++.|++||+++++.+
T Consensus 237 ~~~~~~~~~~~~s~dg~~l~~~-~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~i~v~d~~~~~~~ 314 (337)
T 1pby_B 237 RIMDVFYFSTAVNPAKTRAFGA-YNVLESFDLEKNASIKRVPLPHSYYSVNVST-DGSTVWLGGALGDLAAYDAETLEKK 314 (337)
T ss_dssp EECSSCEEEEEECTTSSEEEEE-ESEEEEEETTTTEEEEEEECSSCCCEEEECT-TSCEEEEESBSSEEEEEETTTCCEE
T ss_pred CCCCCceeeEEECCCCCEEEEe-CCeEEEEECCCCcCcceecCCCceeeEEECC-CCCEEEEEcCCCcEEEEECcCCcEE
Confidence 23458999999988777 6899999999988888887766677788887 5888888888999999999999887
Q ss_pred eec
Q 024372 264 AIT 266 (268)
Q Consensus 264 ~~~ 266 (268)
...
T Consensus 315 ~~~ 317 (337)
T 1pby_B 315 GQV 317 (337)
T ss_dssp EEE
T ss_pred EEE
Confidence 653
No 134
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.93 E-value=2.7e-23 Score=174.39 Aligned_cols=231 Identities=12% Similarity=0.034 Sum_probs=178.6
Q ss_pred CCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCcc-CcEEEEEecCCCcEE-EEeeCCCcEEEEeCCCCCeeeeeccC----
Q 024372 29 PDGFFLVSASKDSSPMLRNGETGDWIGTFEGHK-GAVWSCCLDANALFS-ASGSADFTAKLWDALTGDEKHSFEHK---- 102 (268)
Q Consensus 29 ~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~-~~V~~~~~~~~~~~l-~s~s~D~~v~iw~~~~~~~~~~~~~~---- 102 (268)
+++.++++++.+++|.+||..+++.+.++..+. ..+..++|+|+++++ +++..++.|.+||+.+++....+...
T Consensus 9 ~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~ 88 (349)
T 1jmx_B 9 AGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPG 88 (349)
T ss_dssp TTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTT
T ss_pred CCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccc
Confidence 578899999999999999999999988887554 257789999999754 56667899999999988877666532
Q ss_pred ---CeEEEEEECCCCCEEEEeeCC------------CeEEEEECCCCCC--CCeEecCCcccEEEEEEeCCCCcEEEEee
Q 024372 103 ---HIVRACAFSEDTHLLLTGGFE------------KILRIFDLNRPDA--PPREVGNSSGSIRTVAWLHSDQTILSSCT 165 (268)
Q Consensus 103 ---~~v~~v~~~~~~~~l~s~~~d------------~~i~~~d~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 165 (268)
..+..++|+|+++.+++++.+ +.|.+||+.+++. .......+ ..+.+++|+|++. ++++ +
T Consensus 89 ~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~-l~~~-~ 165 (349)
T 1jmx_B 89 EVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMP-RQVYLMRAADDGS-LYVA-G 165 (349)
T ss_dssp EEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECC-SSCCCEEECTTSC-EEEE-S
T ss_pred cccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCC-CcccceeECCCCc-EEEc-c
Confidence 236788999999999998865 8999999875321 12223222 3577888999887 6553 2
Q ss_pred CCCeEEEEeCCCCceEEeecCCC---------------------------------------------------------
Q 024372 166 DSGGVRLWDARSGKIVQTLETKS--------------------------------------------------------- 188 (268)
Q Consensus 166 ~d~~i~iwd~~~~~~~~~~~~~~--------------------------------------------------------- 188 (268)
+.|++||+++++.+..+....
T Consensus 166 --~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 243 (349)
T 1jmx_B 166 --PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTG 243 (349)
T ss_dssp --SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTC
T ss_pred --CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCC
Confidence 449999999998877654321
Q ss_pred ------------CEEEEEECC-CCcEEEEeCCCeEEEEeCCCceeeeEEeCCCCceeeEEcCCCCCEEEeccCCCeEEEE
Q 024372 189 ------------PVTSAEVSR-DGRYITTADGSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVF 255 (268)
Q Consensus 189 ------------~v~~~~~s~-~g~~l~~~~~~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~d~~i~~w 255 (268)
.+..++++| +|+++..+ ++.|.+||+.+.+.++.+.....+..+.+++ ++++|++++.++.|++|
T Consensus 244 ~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~-~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~v~v~ 321 (349)
T 1jmx_B 244 KTHTQEFADLTELYFTGLRSPKDPNQIYGV-LNRLAKYDLKQRKLIKAANLDHTYYCVAFDK-KGDKLYLGGTFNDLAVF 321 (349)
T ss_dssp CEEEEEEEECSSCEEEEEECSSCTTEEEEE-ESEEEEEETTTTEEEEEEECSSCCCEEEECS-SSSCEEEESBSSEEEEE
T ss_pred cEEecccccCCCcceeeEecCCCCCEEEEE-cCeEEEEECccCeEEEEEcCCCCccceEECC-CCCEEEEecCCCeEEEE
Confidence 234667789 99988777 7899999999988888887666667778887 57777777888999999
Q ss_pred ECCCCcEEeec
Q 024372 256 DFHTGEQIAIT 266 (268)
Q Consensus 256 d~~~g~~~~~~ 266 (268)
|.++++++...
T Consensus 322 d~~~~~~~~~~ 332 (349)
T 1jmx_B 322 NPDTLEKVKNI 332 (349)
T ss_dssp ETTTTEEEEEE
T ss_pred eccccceeeee
Confidence 99999887653
No 135
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.93 E-value=1.5e-23 Score=171.31 Aligned_cols=236 Identities=12% Similarity=0.079 Sum_probs=173.5
Q ss_pred cEEeeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCC-CCeEEEeeCc-cCcEEEEEecCCCcEEEEee--CCCc
Q 024372 9 PLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGET-GDWIGTFEGH-KGAVWSCCLDANALFSASGS--ADFT 84 (268)
Q Consensus 9 ~~~~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~-~~~~~~~~~h-~~~V~~~~~~~~~~~l~s~s--~D~~ 84 (268)
+..+..|...|.+++|+| +|++|++++ ++.+.+||..+ ++....+.+| ...|..++|+|++.++++++ .++.
T Consensus 34 ~~~~~~~~~~v~~~~~sp---dg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~ 109 (297)
T 2ojh_A 34 MRVVWQTPELFEAPNWSP---DGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGK 109 (297)
T ss_dssp EEEEEEESSCCEEEEECT---TSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSS
T ss_pred eeeeccCCcceEeeEECC---CCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCc
Confidence 344567999999999985 899999887 78999999999 8887777666 46788999999999999888 4455
Q ss_pred EEEEe--CCCCCeeeeeccCCeEEEEEECCCCCEEE-EeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEE
Q 024372 85 AKLWD--ALTGDEKHSFEHKHIVRACAFSEDTHLLL-TGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTIL 161 (268)
Q Consensus 85 v~iw~--~~~~~~~~~~~~~~~v~~v~~~~~~~~l~-s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 161 (268)
.+||. ..++. ...+.....+..++|+|+++.++ ++..++.+++|+++...........+...+.++.|+|++..++
T Consensus 110 ~~l~~~~~~~~~-~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~ 188 (297)
T 2ojh_A 110 SAIYLLPSTGGT-PRLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIY 188 (297)
T ss_dssp CEEEEEETTCCC-CEECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEE
T ss_pred ceEEEEECCCCc-eEEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEE
Confidence 66654 44444 34444444588899999999777 7888999999986433333344455667899999999888777
Q ss_pred EEeeCCCeEEEEeCC-CCceEEeecC-CCCEEEEEECCCCcEEEEe-CC-----------CeEEEEeCCCceeeeEE---
Q 024372 162 SSCTDSGGVRLWDAR-SGKIVQTLET-KSPVTSAEVSRDGRYITTA-DG-----------SSVKFWDANHFGLVKGY--- 224 (268)
Q Consensus 162 ~~~~~d~~i~iwd~~-~~~~~~~~~~-~~~v~~~~~s~~g~~l~~~-~~-----------~~v~~wd~~~~~~~~~~--- 224 (268)
+++..++.++||+++ .+..+..+.. ...+..+.|+|+|++|+.+ .+ ..|.+||+...+.....
T Consensus 189 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~ 268 (297)
T 2ojh_A 189 FNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLF 268 (297)
T ss_dssp EEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEE
T ss_pred EEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccC
Confidence 776667899999886 4555555543 3458889999999987643 32 46999999876543333
Q ss_pred eCCCCceeeEEcCCCCCEEEeccCCC
Q 024372 225 NMPCNTESASLEPKLGNIFIAGGEDM 250 (268)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~gs~d~ 250 (268)
........+.++| ++++|++++.|.
T Consensus 269 ~~~~~~~~~~~sp-dg~~l~~~~~~~ 293 (297)
T 2ojh_A 269 GGQGTMNSPNWSP-DGDEFAYVRYFP 293 (297)
T ss_dssp ESTTTSCSCCBCT-TSSEEEEEEECC
T ss_pred CCCcccccceECC-CCCEEEEEEecc
Confidence 2333455667776 688888776653
No 136
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.92 E-value=2.4e-22 Score=167.90 Aligned_cols=229 Identities=9% Similarity=0.030 Sum_probs=174.3
Q ss_pred CCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEee-CCCcEEEEeCCCCCe-eeeeccCCeEEE
Q 024372 30 DGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGS-ADFTAKLWDALTGDE-KHSFEHKHIVRA 107 (268)
Q Consensus 30 dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s-~D~~v~iw~~~~~~~-~~~~~~~~~v~~ 107 (268)
.+..+++++.+++|.+||..+++.+..+..+...+ .++|+|++++++.++ .++.|++||..++.. ...+........
T Consensus 9 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~ 87 (331)
T 3u4y_A 9 SNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMA 87 (331)
T ss_dssp CCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCC
T ss_pred CCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCcc
Confidence 45568888999999999999999988888776667 999999998665554 589999999998886 566554444444
Q ss_pred -EEECCCCCEEEEeeCCC---eEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEeeCCCe-EEEEeCCCCceE-
Q 024372 108 -CAFSEDTHLLLTGGFEK---ILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGG-VRLWDARSGKIV- 181 (268)
Q Consensus 108 -v~~~~~~~~l~s~~~d~---~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~-i~iwd~~~~~~~- 181 (268)
++|+|+++.++++..++ .|.+||+.+++. ...... ......++|+|++..+++++..++. |.+|++.....+
T Consensus 88 ~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~-~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~ 165 (331)
T 3u4y_A 88 DVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKF-ISTIPI-PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLF 165 (331)
T ss_dssp CEEECTTSSEEEECCCSSSSCEEEEEETTTTEE-EEEEEC-CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEE
T ss_pred ceEECCCCCEEEEecCCCCcccEEEEECCCCCe-EEEEEC-CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEe
Confidence 99999999998655553 899999876543 233322 3356889999998888888777778 999998754332
Q ss_pred ----EeecCCCCEEEEEECCCCcEE-EEe-CCCeEEEEeCCCcee---eeEEeCCCCceeeEEcCCCCCEEE-eccCCCe
Q 024372 182 ----QTLETKSPVTSAEVSRDGRYI-TTA-DGSSVKFWDANHFGL---VKGYNMPCNTESASLEPKLGNIFI-AGGEDMW 251 (268)
Q Consensus 182 ----~~~~~~~~v~~~~~s~~g~~l-~~~-~~~~v~~wd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~gs~d~~ 251 (268)
..+.....+..++|+|+|+++ ++. .++.|++||+.+.+. +..+.....+..+.++| +|++++ +...++.
T Consensus 166 ~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~v~~~~~~~ 244 (331)
T 3u4y_A 166 DTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTNNLPGTIVVSR-DGSTVYVLTESTVD 244 (331)
T ss_dssp EEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECT-TSSEEEEECSSEEE
T ss_pred ecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCCCCceEEECC-CCCEEEEEEcCCCE
Confidence 233444568899999999865 444 478999999988877 77777666667778887 577554 5556888
Q ss_pred EEEEECCCCcE
Q 024372 252 VHVFDFHTGEQ 262 (268)
Q Consensus 252 i~~wd~~~g~~ 262 (268)
|.+||.++|+.
T Consensus 245 i~~~d~~~~~~ 255 (331)
T 3u4y_A 245 VFNFNQLSGTL 255 (331)
T ss_dssp EEEEETTTTEE
T ss_pred EEEEECCCCce
Confidence 99999998887
No 137
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.92 E-value=6.7e-22 Score=166.26 Aligned_cols=243 Identities=12% Similarity=0.098 Sum_probs=185.3
Q ss_pred cCCCeeeEEEecCCCCCcEEEEEeC-------CCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEE-EEeeCCCcEE
Q 024372 15 HSRPVVDLFYSPITPDGFFLVSASK-------DSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFS-ASGSADFTAK 86 (268)
Q Consensus 15 h~~~v~~~~f~~~~~dg~~l~s~s~-------d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l-~s~s~D~~v~ 86 (268)
....+..++|+| +|++|+.++. ++++.+||..+++.+..+... ..+..+++++++.++ ++...++.|.
T Consensus 39 ~~~~~~~~~~s~---dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~~~~v~ 114 (353)
T 3vgz_A 39 VGKGAYEMAYSQ---QENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHND-LKPFGATINNTTQTLWFGNTVNSAVT 114 (353)
T ss_dssp EESSEEEEEEET---TTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEES-SCCCSEEEETTTTEEEEEETTTTEEE
T ss_pred hccCccceEECC---CCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecC-CCcceEEECCCCCEEEEEecCCCEEE
Confidence 345677899985 8888888875 467999999999988888643 446788999999854 5666789999
Q ss_pred EEeCCCCCeeeeeccCC----------eEEEEEECCCCCEEEEee--CCCeEEEEECCCCCCCCeEecCCcccEEEEEEe
Q 024372 87 LWDALTGDEKHSFEHKH----------IVRACAFSEDTHLLLTGG--FEKILRIFDLNRPDAPPREVGNSSGSIRTVAWL 154 (268)
Q Consensus 87 iw~~~~~~~~~~~~~~~----------~v~~v~~~~~~~~l~s~~--~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~ 154 (268)
+||..+++....+.... .+..+.|+|+++.+++++ .++.|.+||+.+.+. ......+...+..++|+
T Consensus 115 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~s 193 (353)
T 3vgz_A 115 AIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKL-KTAIQNTGKMSTGLALD 193 (353)
T ss_dssp EEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEE-EEEECCCCTTCCCCEEE
T ss_pred EEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCce-EEEecCCCCccceEEEC
Confidence 99999998877765422 267899999999777765 478899999876542 23333233446778999
Q ss_pred CCCCcEEEEeeCCCeEEEEeCCCCceEEeecC-----CCCEEEEEECCCCcEEEE-e-CCCeEEEEeCCCceeeeEEeCC
Q 024372 155 HSDQTILSSCTDSGGVRLWDARSGKIVQTLET-----KSPVTSAEVSRDGRYITT-A-DGSSVKFWDANHFGLVKGYNMP 227 (268)
Q Consensus 155 ~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~-----~~~v~~~~~s~~g~~l~~-~-~~~~v~~wd~~~~~~~~~~~~~ 227 (268)
|++..++++. .++.|.+||+++++.+..+.. ...+..++++|+|+++.. . .++.|.+||+.+.+.+..+...
T Consensus 194 ~dg~~l~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~ 272 (353)
T 3vgz_A 194 SEGKRLYTTN-ADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAP 272 (353)
T ss_dssp TTTTEEEEEC-TTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECS
T ss_pred CCCCEEEEEc-CCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcC
Confidence 9888766654 569999999999998877653 234778999999986654 3 4589999999998888877765
Q ss_pred CCceeeEEcCCCCC-EEEeccCCCeEEEEECCCCcEEee
Q 024372 228 CNTESASLEPKLGN-IFIAGGEDMWVHVFDFHTGEQIAI 265 (268)
Q Consensus 228 ~~~~~~~~~~~~~~-~~~~gs~d~~i~~wd~~~g~~~~~ 265 (268)
.. ..+.+++ +++ ++++...++.|.+||..+++.+..
T Consensus 273 ~~-~~~~~s~-dg~~l~v~~~~~~~v~~~d~~~~~~~~~ 309 (353)
T 3vgz_A 273 ES-LAVLFNP-ARNEAYVTHRQAGKVSVIDAKSYKVVKT 309 (353)
T ss_dssp SC-CCEEEET-TTTEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred CC-ceEEECC-CCCEEEEEECCCCeEEEEECCCCeEEEE
Confidence 43 4567777 466 556666799999999999988764
No 138
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.92 E-value=3.9e-22 Score=168.02 Aligned_cols=248 Identities=11% Similarity=0.118 Sum_probs=172.7
Q ss_pred eecCCCeeeEEEecCCCCCcEEEEEeC---CCCeEEeeCCCCC--eEEEeeCccCcEEEEEecCCCcEEEEee-CCCcEE
Q 024372 13 HGHSRPVVDLFYSPITPDGFFLVSASK---DSSPMLRNGETGD--WIGTFEGHKGAVWSCCLDANALFSASGS-ADFTAK 86 (268)
Q Consensus 13 ~~h~~~v~~~~f~~~~~dg~~l~s~s~---d~~i~iw~~~~~~--~~~~~~~h~~~V~~~~~~~~~~~l~s~s-~D~~v~ 86 (268)
..+...+..++|+| ||+ |++++. ++.|.+|++.+++ .+..+..|...+..++|+|+++++++++ .++.++
T Consensus 36 ~~~~~~p~~~a~sp---dg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~ 111 (347)
T 3hfq_A 36 LAATQNPTYLALSA---KDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAE 111 (347)
T ss_dssp EEECSCCCCEEECT---TCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEE
T ss_pred eeccCCcceEEEcc---CCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEE
Confidence 35566777899985 888 555554 6899999997775 4555566777888999999999888777 789999
Q ss_pred EEeCCC-CCe--eeeeccC----------CeEEEEEECCCCCEEEEeeCCCeEEEEECCC-CCCCC-eE-ecCCcccEEE
Q 024372 87 LWDALT-GDE--KHSFEHK----------HIVRACAFSEDTHLLLTGGFEKILRIFDLNR-PDAPP-RE-VGNSSGSIRT 150 (268)
Q Consensus 87 iw~~~~-~~~--~~~~~~~----------~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~-~~~~~-~~-~~~~~~~v~~ 150 (268)
+|++.. +.. ...+.+. ..+.+++|+|+++++++...++.+++|++.. +.... .. ..........
T Consensus 112 v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~ 191 (347)
T 3hfq_A 112 VMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRH 191 (347)
T ss_dssp EEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEE
T ss_pred EEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCce
Confidence 999963 222 2222221 2378899999999777777789999999873 22111 11 1122235677
Q ss_pred EEEeCCCCcEEEEeeCCCeEEEEeCCC--Cce--EEeecC-------CCCEEEEEECCCCcEEE-Ee-CCCeEEEEeCCC
Q 024372 151 VAWLHSDQTILSSCTDSGGVRLWDARS--GKI--VQTLET-------KSPVTSAEVSRDGRYIT-TA-DGSSVKFWDANH 217 (268)
Q Consensus 151 ~~~~~~~~~~~~~~~~d~~i~iwd~~~--~~~--~~~~~~-------~~~v~~~~~s~~g~~l~-~~-~~~~v~~wd~~~ 217 (268)
++|+|++..+++++..++.|++|++.. ++. +..+.. ...+..++|+|||++|. +. .++.|.+||+..
T Consensus 192 ~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~ 271 (347)
T 3hfq_A 192 LVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTA 271 (347)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECG
T ss_pred EEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECC
Confidence 999999887777777789999999874 543 222221 13478899999999763 43 478999999873
Q ss_pred ---ceeeeEEeC-CCCceeeEEcCCCCCEEEecc-CCCeEEEE--ECCCCcEEee
Q 024372 218 ---FGLVKGYNM-PCNTESASLEPKLGNIFIAGG-EDMWVHVF--DFHTGEQIAI 265 (268)
Q Consensus 218 ---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~gs-~d~~i~~w--d~~~g~~~~~ 265 (268)
...+..+.. ...+..++++| +|++|++++ .++.|.+| |.++|+...+
T Consensus 272 ~g~~~~~~~~~~~~~~~~~~~~sp-dg~~l~v~~~~~~~v~v~~~d~~tg~l~~~ 325 (347)
T 3hfq_A 272 DGHLTLIQQISTEGDFPRDFDLDP-TEAFVVVVNQNTDNATLYARDLTSGKLSLL 325 (347)
T ss_dssp GGCEEEEEEEECSSSCCCEEEECT-TSSEEEEEETTTTEEEEEEECTTTCCEEEE
T ss_pred CCcEEEeEEEecCCCCcCeEEECC-CCCEEEEEEcCCCcEEEEEEeCCCCeEEec
Confidence 244444544 23456778877 688777665 45899999 5667877643
No 139
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.92 E-value=1.2e-22 Score=165.98 Aligned_cols=224 Identities=13% Similarity=0.052 Sum_probs=163.0
Q ss_pred EEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCCCcEEEEeCCC-CCeeeeecc--CCeEEEEEECC
Q 024372 36 SASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALT-GDEKHSFEH--KHIVRACAFSE 112 (268)
Q Consensus 36 s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw~~~~-~~~~~~~~~--~~~v~~v~~~~ 112 (268)
.++.|++|++||..+++.. .+..|...|.+++|+|++.++++++ ++.|++||+.+ ++....... ...+.+++|+|
T Consensus 17 ~~~~~~~i~~~d~~~~~~~-~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~sp 94 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMR-VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISP 94 (297)
T ss_dssp -CCCCEEEEEEETTTTEEE-EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECT
T ss_pred CCCcceeEEEEeCCCCcee-eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECC
Confidence 4578899999999998766 4556899999999999999998876 78999999998 776655532 35788899999
Q ss_pred CCCEEEEee--CCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEeeCCCeEEEEeC--CCCceEEeecCCC
Q 024372 113 DTHLLLTGG--FEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDA--RSGKIVQTLETKS 188 (268)
Q Consensus 113 ~~~~l~s~~--~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~iwd~--~~~~~~~~~~~~~ 188 (268)
+++.+++++ .++..++|.++........+..+ ..+..++|+|++..++.++..++.++||++ .+++......+..
T Consensus 95 dg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 173 (297)
T 2ojh_A 95 DGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEG 173 (297)
T ss_dssp TSSEEEEEECTTTSSCEEEEEETTCCCCEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSS
T ss_pred CCCEEEEEEeCCCCcceEEEEECCCCceEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCC
Confidence 999999988 33455666543222223444333 348889999998887767777799999985 4455544444556
Q ss_pred CEEEEEECCCCcEEEE-e-CCCeEEEEeCC-CceeeeEEeCCC-CceeeEEcCCCCCEEEeccCC-----------CeEE
Q 024372 189 PVTSAEVSRDGRYITT-A-DGSSVKFWDAN-HFGLVKGYNMPC-NTESASLEPKLGNIFIAGGED-----------MWVH 253 (268)
Q Consensus 189 ~v~~~~~s~~g~~l~~-~-~~~~v~~wd~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~gs~d-----------~~i~ 253 (268)
.+.++.|+|+|++++. + .++.+++|++. ....+..+..+. ....+.++| ++++|++++.+ ..|+
T Consensus 174 ~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~~~l~ 252 (297)
T 2ojh_A 174 RNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSP-SGDKVVFVSYDADVFDHPRDLDVRVQ 252 (297)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECT-TSSEEEEEEEETTCCSCCSSEEEEEE
T ss_pred ccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECC-CCCEEEEEEcCCCCCcccccCceEEE
Confidence 7999999999997654 4 47889999875 334444443322 234556666 68888887765 5699
Q ss_pred EEECCCCcEE
Q 024372 254 VFDFHTGEQI 263 (268)
Q Consensus 254 ~wd~~~g~~~ 263 (268)
+||+.+++..
T Consensus 253 ~~d~~~~~~~ 262 (297)
T 2ojh_A 253 LMDMDGGNVE 262 (297)
T ss_dssp EEETTSCSCE
T ss_pred EEecCCCCce
Confidence 9999888653
No 140
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.91 E-value=8.4e-23 Score=188.56 Aligned_cols=235 Identities=10% Similarity=-0.004 Sum_probs=176.1
Q ss_pred CCCeeeEEEecCCCCCcEEEEEeC-CC-----CeEEeeCCCCCeEEEeeCccCc------------------------EE
Q 024372 16 SRPVVDLFYSPITPDGFFLVSASK-DS-----SPMLRNGETGDWIGTFEGHKGA------------------------VW 65 (268)
Q Consensus 16 ~~~v~~~~f~~~~~dg~~l~s~s~-d~-----~i~iw~~~~~~~~~~~~~h~~~------------------------V~ 65 (268)
.+.|.+++|+| ||++|++++. |+ +|.+||..+++....+..|... |.
T Consensus 36 ~~~~~~~~~Sp---dG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 112 (741)
T 2ecf_A 36 GPTLMKPKVAP---DGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIV 112 (741)
T ss_dssp CCCCEEEEECT---TSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESC
T ss_pred CCCCCCceEec---CCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcc
Confidence 44688999985 9999999998 88 8999999999887777655433 78
Q ss_pred EEEecCCCcEEEEeeCCCcEEEEeCCCC---CeeeeeccCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEec
Q 024372 66 SCCLDANALFSASGSADFTAKLWDALTG---DEKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVG 142 (268)
Q Consensus 66 ~~~~~~~~~~l~s~s~D~~v~iw~~~~~---~~~~~~~~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~ 142 (268)
.++|+||++++++++. +.|++||+.++ .......+...+..++|+|||+.|+.++ ++.|++||+.++... +...
T Consensus 113 ~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~-~~~~ 189 (741)
T 2ecf_A 113 DYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQM-QLTA 189 (741)
T ss_dssp CCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEE-ECCC
T ss_pred eeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEE-Eecc
Confidence 8999999999998886 99999999988 5555555777899999999999999887 468999998754321 1111
Q ss_pred CCccc----------------EEEEEEeCCCCcEEEEeeCCC--------------------------------eEEEEe
Q 024372 143 NSSGS----------------IRTVAWLHSDQTILSSCTDSG--------------------------------GVRLWD 174 (268)
Q Consensus 143 ~~~~~----------------v~~~~~~~~~~~~~~~~~~d~--------------------------------~i~iwd 174 (268)
.+... +..+.|+|++..++.++.+.+ .|++||
T Consensus 190 ~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d 269 (741)
T 2ecf_A 190 DGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVIS 269 (741)
T ss_dssp CCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEEC
T ss_pred CCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEE
Confidence 11111 367899999988777655432 789999
Q ss_pred CCC-CceEEeec---CCCCEEEEEECCCCcEEEEe------CCCeEEEEeCCCceeeeEEeCCC-----CceeeEEcCCC
Q 024372 175 ARS-GKIVQTLE---TKSPVTSAEVSRDGRYITTA------DGSSVKFWDANHFGLVKGYNMPC-----NTESASLEPKL 239 (268)
Q Consensus 175 ~~~-~~~~~~~~---~~~~v~~~~~s~~g~~l~~~------~~~~v~~wd~~~~~~~~~~~~~~-----~~~~~~~~~~~ 239 (268)
+.+ ++...... +...+..++| |||++|+.+ .+..|++||+.+.+....+..+. ......+++ +
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~sp-d 347 (741)
T 2ecf_A 270 PAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLD-D 347 (741)
T ss_dssp SSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECT-T
T ss_pred CCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECC-C
Confidence 998 87655442 3345889999 999987643 13579999998877665554332 123567777 5
Q ss_pred CCEEEeccCCCeEEEEECC
Q 024372 240 GNIFIAGGEDMWVHVFDFH 258 (268)
Q Consensus 240 ~~~~~~gs~d~~i~~wd~~ 258 (268)
|+++++++.|+.+++|.+.
T Consensus 348 g~~~~~~~~~g~~~l~~~~ 366 (741)
T 2ecf_A 348 GSILWSSERTGFQHLYRID 366 (741)
T ss_dssp SCEEEEECTTSSCEEEEEC
T ss_pred CeEEEEecCCCccEEEEEc
Confidence 8888888889877777654
No 141
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.91 E-value=7.5e-22 Score=165.97 Aligned_cols=227 Identities=13% Similarity=0.093 Sum_probs=177.0
Q ss_pred CCCeeeEEEecCCCCCcEE-EEEeCCCCeEEeeCCCCCeEEEeeCccCc---------EEEEEecCCCcEEEEee--CCC
Q 024372 16 SRPVVDLFYSPITPDGFFL-VSASKDSSPMLRNGETGDWIGTFEGHKGA---------VWSCCLDANALFSASGS--ADF 83 (268)
Q Consensus 16 ~~~v~~~~f~~~~~dg~~l-~s~s~d~~i~iw~~~~~~~~~~~~~h~~~---------V~~~~~~~~~~~l~s~s--~D~ 83 (268)
...+.+++|+| +|+++ ++...++.+.+||..+++.+..+..+... +..++|+|++.+++.++ .++
T Consensus 88 ~~~~~~~~~s~---dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~ 164 (353)
T 3vgz_A 88 DLKPFGATINN---TTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKES 164 (353)
T ss_dssp SSCCCSEEEET---TTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSC
T ss_pred CCCcceEEECC---CCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCc
Confidence 34567899985 78755 45566789999999999998888765432 68899999998766554 588
Q ss_pred cEEEEeCCCCCeeeeec-cCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEec---CCcccEEEEEEeCCCCc
Q 024372 84 TAKLWDALTGDEKHSFE-HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVG---NSSGSIRTVAWLHSDQT 159 (268)
Q Consensus 84 ~v~iw~~~~~~~~~~~~-~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~ 159 (268)
.|.+||..+++....+. +...+..+.|+|+++.+++++.++.+.+||+.+++....... .+...+..++|+|++..
T Consensus 165 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~ 244 (353)
T 3vgz_A 165 VIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQR 244 (353)
T ss_dssp EEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTE
T ss_pred eEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCE
Confidence 99999999998888877 555678899999999999999999999999876543222221 13445778999999888
Q ss_pred EEEEeeCCCeEEEEeCCCCceEEeecCCCCEEEEEECCCCcEE-EEe-CCCeEEEEeCCCceeeeEEeCCCCceeeEEcC
Q 024372 160 ILSSCTDSGGVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYI-TTA-DGSSVKFWDANHFGLVKGYNMPCNTESASLEP 237 (268)
Q Consensus 160 ~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~g~~l-~~~-~~~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~ 237 (268)
+++++..++.|.+||+++++.+..+....+ ..++|+|+|+++ ++. .++.|.+||+.+.+.+..+.....+..+.+.+
T Consensus 245 l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~ 323 (353)
T 3vgz_A 245 AFITDSKAAEVLVVDTRNGNILAKVAAPES-LAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHPNSLALSA 323 (353)
T ss_dssp EEEEESSSSEEEEEETTTCCEEEEEECSSC-CCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECCSEEEEEEECT
T ss_pred EEEEeCCCCEEEEEECCCCcEEEEEEcCCC-ceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecCCCCCeEEEcC
Confidence 887777779999999999998887775443 579999999854 444 57899999999998888888776777788887
Q ss_pred CCCCEEEecc
Q 024372 238 KLGNIFIAGG 247 (268)
Q Consensus 238 ~~~~~~~~gs 247 (268)
+|++++.+.
T Consensus 324 -dg~~l~v~~ 332 (353)
T 3vgz_A 324 -DGKTLYVSV 332 (353)
T ss_dssp -TSCEEEEEE
T ss_pred -CCCEEEEEE
Confidence 577555443
No 142
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.89 E-value=4e-22 Score=183.45 Aligned_cols=237 Identities=11% Similarity=-0.020 Sum_probs=170.0
Q ss_pred CeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccC---cEEEEEecCCCcEEEEeeCC---------CcE
Q 024372 18 PVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKG---AVWSCCLDANALFSASGSAD---------FTA 85 (268)
Q Consensus 18 ~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~---~V~~~~~~~~~~~l~s~s~D---------~~v 85 (268)
.+.+++|+| ||+++++ +.|+++++||..+++....+.+|.. .|..++|+||++++++++.+ +.+
T Consensus 18 ~~~~~~~sp---dg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i 93 (723)
T 1xfd_A 18 HDPEAKWIS---DTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYY 93 (723)
T ss_dssp CCCCCCBSS---SSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEE
T ss_pred cccccEEcC---CCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeE
Confidence 356788885 8997776 7899999999999998888887765 49999999999999998765 778
Q ss_pred EEEeCCCCCeeeeec---cCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEecCCcc----------------
Q 024372 86 KLWDALTGDEKHSFE---HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSG---------------- 146 (268)
Q Consensus 86 ~iw~~~~~~~~~~~~---~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~---------------- 146 (268)
++||+.++....... +...+..++|+|||+.|+.++. +.|++||+.+++. .+....+..
T Consensus 94 ~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~-~~~~~~~~~~~~~~g~~~~v~~ee~ 171 (723)
T 1xfd_A 94 VLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQA-IRVVSTGKEGVIYNGLSDWLYEEEI 171 (723)
T ss_dssp EEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCC-EEEECCCBTTTEEEEECCHHHHHTT
T ss_pred EEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCce-EEEecCCCCCceECcccceeEEEEe
Confidence 899999887632222 2334788999999999998876 7999999876543 222222222
Q ss_pred --cEEEEEEeCCCCcEEEEeeCC---------------------------------CeEEEEeCCCCceEEeecC-----
Q 024372 147 --SIRTVAWLHSDQTILSSCTDS---------------------------------GGVRLWDARSGKIVQTLET----- 186 (268)
Q Consensus 147 --~v~~~~~~~~~~~~~~~~~~d---------------------------------~~i~iwd~~~~~~~~~~~~----- 186 (268)
.+..++|+|++..++.++.++ ..|++||+.+++....+..
T Consensus 172 ~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~ 251 (723)
T 1xfd_A 172 LKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPR 251 (723)
T ss_dssp SSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGG
T ss_pred ccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCC
Confidence 226899999988776665432 2799999999886555543
Q ss_pred --CCCEEEEEECCCCcEEEEe-C----CCeEEEEeCCCceeeeEEeCC-CCc-----eeeEEcCCCCCEEEe--ccCCC-
Q 024372 187 --KSPVTSAEVSRDGRYITTA-D----GSSVKFWDANHFGLVKGYNMP-CNT-----ESASLEPKLGNIFIA--GGEDM- 250 (268)
Q Consensus 187 --~~~v~~~~~s~~g~~l~~~-~----~~~v~~wd~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~~~--gs~d~- 250 (268)
...+..++|+|||++++.. . +..|++||+.+.++...+... ... ....++| +|+.|+. +..|+
T Consensus 252 ~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~ 330 (723)
T 1xfd_A 252 MREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSK-DGRKFFFIRAIPQGG 330 (723)
T ss_dssp GSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECT-TSCSEEEEEEECCSS
T ss_pred CccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcC-CCCeEEEEEecccCC
Confidence 2357899999999988543 2 247999999887765554321 111 2567777 5765553 44566
Q ss_pred -----eEEEEE-CCCCc
Q 024372 251 -----WVHVFD-FHTGE 261 (268)
Q Consensus 251 -----~i~~wd-~~~g~ 261 (268)
.|++|| ..+++
T Consensus 331 ~~~~~~l~~~d~~~~~~ 347 (723)
T 1xfd_A 331 RGKFYHITVSSSQPNSS 347 (723)
T ss_dssp SSCEEEEEEECSSCCSS
T ss_pred CcceeEEEEEeccCCCC
Confidence 577788 34444
No 143
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.89 E-value=5.4e-22 Score=183.16 Aligned_cols=236 Identities=11% Similarity=0.068 Sum_probs=169.1
Q ss_pred CeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCC--eEEEeeCccCcEEEEEecCCCcEEEEeeCCCcEEEEeCCCCCe
Q 024372 18 PVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGD--WIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDE 95 (268)
Q Consensus 18 ~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~--~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~ 95 (268)
.|.+++|+| ||++|++++. +++.+||+.+++ .+..+..|...+..++|+|||++++.++ ++.|++||+.++..
T Consensus 110 ~v~~~~~Sp---Dg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~ 184 (741)
T 2ecf_A 110 GIVDYQWSP---DAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQ 184 (741)
T ss_dssp ESCCCEECT---TSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEE
T ss_pred CcceeEECC---CCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCE
Confidence 378999985 9999999987 999999999883 3446777888999999999999999887 46999999988776
Q ss_pred eeeeccC-Ce----------------EEEEEECCCCCEEEEeeCCC---------------------------------e
Q 024372 96 KHSFEHK-HI----------------VRACAFSEDTHLLLTGGFEK---------------------------------I 125 (268)
Q Consensus 96 ~~~~~~~-~~----------------v~~v~~~~~~~~l~s~~~d~---------------------------------~ 125 (268)
....... .. +..+.|+||++.|++++.|+ .
T Consensus 185 ~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~ 264 (741)
T 2ecf_A 185 MQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVK 264 (741)
T ss_dssp EECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEE
T ss_pred EEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeE
Confidence 5543322 21 46799999999999987765 7
Q ss_pred EEEEECCC-CCCCCeEec-CCcccEEEEEEeCCCCcEEEEee----CCCeEEEEeCCCCceEEeecCCC-----CEEEEE
Q 024372 126 LRIFDLNR-PDAPPREVG-NSSGSIRTVAWLHSDQTILSSCT----DSGGVRLWDARSGKIVQTLETKS-----PVTSAE 194 (268)
Q Consensus 126 i~~~d~~~-~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~----~d~~i~iwd~~~~~~~~~~~~~~-----~v~~~~ 194 (268)
|.+||+.+ ++....... .+...+..++| |++..+++++. .+..|++||++++++...+..+. .+..++
T Consensus 265 l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~ 343 (741)
T 2ecf_A 265 LGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLR 343 (741)
T ss_dssp EEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCE
T ss_pred EEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceE
Confidence 88889876 542211111 35667899999 98887776654 24689999999998876664322 345789
Q ss_pred ECCCCcEEEEe-CCCeEEEEeCC-CceeeeEEeCCCC-ceee-EEcCCCCCEEE-eccCCC--eEEEEECCC-Cc
Q 024372 195 VSRDGRYITTA-DGSSVKFWDAN-HFGLVKGYNMPCN-TESA-SLEPKLGNIFI-AGGEDM--WVHVFDFHT-GE 261 (268)
Q Consensus 195 ~s~~g~~l~~~-~~~~v~~wd~~-~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~-~gs~d~--~i~~wd~~~-g~ 261 (268)
|+|||++++++ .++.+++|.+. ..+ ...+..... ...+ .+++ +++.++ +++.|+ .+++|++.. |+
T Consensus 344 ~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~-dg~~l~~~~~~~~~~~~~l~~~~~~g~ 416 (741)
T 2ecf_A 344 FLDDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDE-KAGLAYFRAGIESARESQIYAVPLQGG 416 (741)
T ss_dssp ECTTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEET-TTTEEEEEECSSCTTCBEEEEEETTCC
T ss_pred ECCCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeC-CCCEEEEEEeCCCCceEEEEEEEcCCC
Confidence 99999977665 46767777654 233 444433322 3344 3666 576554 566665 899998864 44
No 144
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.89 E-value=1.8e-19 Score=152.57 Aligned_cols=245 Identities=14% Similarity=0.108 Sum_probs=166.8
Q ss_pred cCCCeeeEEEecCCCCCcEEEEEeCC----CCeEEeeCCC--CC--eEEEeeCccCcEEEEEecCCCcEEEEee-CCCcE
Q 024372 15 HSRPVVDLFYSPITPDGFFLVSASKD----SSPMLRNGET--GD--WIGTFEGHKGAVWSCCLDANALFSASGS-ADFTA 85 (268)
Q Consensus 15 h~~~v~~~~f~~~~~dg~~l~s~s~d----~~i~iw~~~~--~~--~~~~~~~h~~~V~~~~~~~~~~~l~s~s-~D~~v 85 (268)
|......++|+| ||++|++++.+ +.+.+|++.. ++ .+..+..+......+++ ++.+++.++ .++.+
T Consensus 48 ~~~~p~~l~~sp---dg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v 122 (361)
T 3scy_A 48 EVANPSYLIPSA---DGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSI 122 (361)
T ss_dssp ECSCCCSEEECT---TSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEE
T ss_pred cCCCCceEEECC---CCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEE
Confidence 667777899985 99999999986 7899997654 54 34445545556777777 677665555 68999
Q ss_pred EEEeCCCCCeeeee----cc-----------CCeEEEEEECCCCCEEEEee-CCCeEEEEECCCCCC----C-C------
Q 024372 86 KLWDALTGDEKHSF----EH-----------KHIVRACAFSEDTHLLLTGG-FEKILRIFDLNRPDA----P-P------ 138 (268)
Q Consensus 86 ~iw~~~~~~~~~~~----~~-----------~~~v~~v~~~~~~~~l~s~~-~d~~i~~~d~~~~~~----~-~------ 138 (268)
.+|++......... .+ ...+.+++|+|+++.+++++ .++.+++|++..... . .
T Consensus 123 ~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~ 202 (361)
T 3scy_A 123 TVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTP 202 (361)
T ss_dssp EEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEE
T ss_pred EEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccc
Confidence 99999754332211 11 12357899999999665544 588999999875432 1 1
Q ss_pred -eEecCCcccEEEEEEeCCCCcEEEEeeCCCeEEEEeCCCCce--EEeecC----CCCEEEEEECCCCcEEEE-eC--CC
Q 024372 139 -REVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKI--VQTLET----KSPVTSAEVSRDGRYITT-AD--GS 208 (268)
Q Consensus 139 -~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~--~~~~~~----~~~v~~~~~s~~g~~l~~-~~--~~ 208 (268)
............++|+|++..+++++..++.|.+||+++++. +..+.. ......++|+|||++|.. .. ++
T Consensus 203 ~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~ 282 (361)
T 3scy_A 203 EAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKAD 282 (361)
T ss_dssp EEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSC
T ss_pred cceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCC
Confidence 112233345678999999887777776679999999987754 333321 234679999999998754 43 47
Q ss_pred eEEEEeCC--Cce--eeeEEeCCCCceeeEEcCCCCCEEEecc-CCCeEEEE--ECCCCcEEee
Q 024372 209 SVKFWDAN--HFG--LVKGYNMPCNTESASLEPKLGNIFIAGG-EDMWVHVF--DFHTGEQIAI 265 (268)
Q Consensus 209 ~v~~wd~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~gs-~d~~i~~w--d~~~g~~~~~ 265 (268)
.|.+|++. ... .+..+.....+..++++| +|++|++++ .++.|.+| |.++|+...+
T Consensus 283 ~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~sp-dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~ 345 (361)
T 3scy_A 283 GVAIFKVDETNGTLTKVGYQLTGIHPRNFIITP-NGKYLLVACRDTNVIQIFERDQATGLLTDI 345 (361)
T ss_dssp EEEEEEECTTTCCEEEEEEEECSSCCCEEEECT-TSCEEEEEETTTTEEEEEEECTTTCCEEEC
T ss_pred EEEEEEEcCCCCcEEEeeEecCCCCCceEEECC-CCCEEEEEECCCCCEEEEEEECCCCcEeec
Confidence 89999985 233 344444433456777887 688777665 67889996 5557776544
No 145
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.89 E-value=5.2e-21 Score=175.73 Aligned_cols=245 Identities=13% Similarity=0.133 Sum_probs=173.5
Q ss_pred EEeeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCC-----CCeEEEeeCccCc--------------EEEEEec
Q 024372 10 LVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGET-----GDWIGTFEGHKGA--------------VWSCCLD 70 (268)
Q Consensus 10 ~~~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~-----~~~~~~~~~h~~~--------------V~~~~~~ 70 (268)
..+..|...+.+++|+| ||++||. +.|++|.+|++.+ ++.......+... +..++|+
T Consensus 114 ~~l~~~~~~~~~~~~Sp---dG~~la~-~~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~S 189 (706)
T 2z3z_A 114 TYLFDTNEETASLDFSP---VGDRVAY-VRNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWS 189 (706)
T ss_dssp EEEECCTTCCTTCEECT---TSSEEEE-EETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEEC
T ss_pred EEccCCcccccCCcCCC---CCCEEEE-EECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEEC
Confidence 34456778899999985 9999998 4789999999998 8766555444443 4789999
Q ss_pred CCCcEEEEee---------------------------------CCCcEEEEeCCCCCeeeee---ccCCeEEEEEECCCC
Q 024372 71 ANALFSASGS---------------------------------ADFTAKLWDALTGDEKHSF---EHKHIVRACAFSEDT 114 (268)
Q Consensus 71 ~~~~~l~s~s---------------------------------~D~~v~iw~~~~~~~~~~~---~~~~~v~~v~~~~~~ 114 (268)
||+++|++++ .+..|++||+.++...... .+...+..++|+||+
T Consensus 190 pDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg 269 (706)
T 2z3z_A 190 PKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDE 269 (706)
T ss_dssp TTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTS
T ss_pred CCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCC
Confidence 9999999887 4467999999888765443 355679999999999
Q ss_pred CEEEEeeCCC-----eEEEEECCCCCCCCeEe-cCCcc---cEEEEEEeC--CCCcEEEEeeCCCeEEEEeCC-CCceEE
Q 024372 115 HLLLTGGFEK-----ILRIFDLNRPDAPPREV-GNSSG---SIRTVAWLH--SDQTILSSCTDSGGVRLWDAR-SGKIVQ 182 (268)
Q Consensus 115 ~~l~s~~~d~-----~i~~~d~~~~~~~~~~~-~~~~~---~v~~~~~~~--~~~~~~~~~~~d~~i~iwd~~-~~~~~~ 182 (268)
+.|++++.++ .|.+||+.+++...... ..... .+..+.|+| ++. +++++..++.++||++. ++..+.
T Consensus 270 ~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~-~l~~~~~~g~~~l~~~~~~~~~~~ 348 (706)
T 2z3z_A 270 NILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQ-FIWQSRRDGWNHLYLYDTTGRLIR 348 (706)
T ss_dssp SEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSE-EEEEECTTSSCEEEEEETTSCEEE
T ss_pred CEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCE-EEEEEccCCccEEEEEECCCCEEE
Confidence 9999887775 89999987652211111 11221 235678888 765 56666777899999876 566666
Q ss_pred eecC-CCCEEE-EEECCCCcEEE-EeC-CC----eEEEEeCCCceeeeEEeCCCCceeeEEcCCCCCEEEecc-CC---C
Q 024372 183 TLET-KSPVTS-AEVSRDGRYIT-TAD-GS----SVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGG-ED---M 250 (268)
Q Consensus 183 ~~~~-~~~v~~-~~~s~~g~~l~-~~~-~~----~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs-~d---~ 250 (268)
.+.. ...+.. ++|+|+|+.|+ ++. ++ .|..||+.... .+.+........+.++| +|++++..+ .+ .
T Consensus 349 ~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~sp-dg~~l~~~~~~~~~p~ 426 (706)
T 2z3z_A 349 QVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK-TKDLTPESGMHRTQLSP-DGSAIIDIFQSPTVPR 426 (706)
T ss_dssp ECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC-CEESCCSSSEEEEEECT-TSSEEEEEEECSSCSC
T ss_pred ecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC-ceeccCCCceEEEEECC-CCCEEEEEecCCCCCc
Confidence 6654 344665 79999998764 333 33 66777776654 33333334455677777 688777653 33 5
Q ss_pred eEEEEECCCCc
Q 024372 251 WVHVFDFHTGE 261 (268)
Q Consensus 251 ~i~~wd~~~g~ 261 (268)
.|++||+.+++
T Consensus 427 ~i~l~d~~~~~ 437 (706)
T 2z3z_A 427 KVTVTNIGKGS 437 (706)
T ss_dssp EEEEEESSSCE
T ss_pred EEEEEECCCCe
Confidence 69999998876
No 146
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.88 E-value=3e-21 Score=173.73 Aligned_cols=235 Identities=13% Similarity=0.063 Sum_probs=162.2
Q ss_pred cCCCeeeEEEecCCCCCcEEEEEeC-CCCeEEeeCCCCCeEEEeeCcc-CcEEEEEecCCCcEEEEeeC---CCcEEEEe
Q 024372 15 HSRPVVDLFYSPITPDGFFLVSASK-DSSPMLRNGETGDWIGTFEGHK-GAVWSCCLDANALFSASGSA---DFTAKLWD 89 (268)
Q Consensus 15 h~~~v~~~~f~~~~~dg~~l~s~s~-d~~i~iw~~~~~~~~~~~~~h~-~~V~~~~~~~~~~~l~s~s~---D~~v~iw~ 89 (268)
+..+|.+++|+| ||++||.++. |++++||++..++.. .+..|. ..|..++|+|| +++++++. +...++|.
T Consensus 20 ~~~~~~~~~~~~---DG~~la~~s~~~g~~~lw~~~~g~~~-~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~ 94 (582)
T 3o4h_A 20 IAVEKYSLQGVV---DGDKLLVVGFSEGSVNAYLYDGGETV-KLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFK 94 (582)
T ss_dssp HHSCEEEEEEEE---TTTEEEEEEEETTEEEEEEEETTEEE-ECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEE
T ss_pred hccchheeecCC---CCCeEEEEEccCCceeEEEEcCCCcE-eeecccccccccccCCCC-eEEEEeccCCCCcceEEEE
Confidence 356899999996 9999999887 999999998666554 454454 68999999999 77777665 56667765
Q ss_pred CCC--CCeeeeeccCCeEEEEEECCCCC--EEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEee
Q 024372 90 ALT--GDEKHSFEHKHIVRACAFSEDTH--LLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCT 165 (268)
Q Consensus 90 ~~~--~~~~~~~~~~~~v~~v~~~~~~~--~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 165 (268)
+.. ......+.........+|+|+++ .+++++.++. .+||+.+++. .....+.. ..++|+|++..++.++.
T Consensus 95 ~~~~~~g~~~~l~~~~~~~~~~~s~dg~~~~~~s~~~~~~-~l~d~~~g~~--~~l~~~~~--~~~~~spDG~~la~~~~ 169 (582)
T 3o4h_A 95 VNTSRPGEEQRLEAVKPMRILSGVDTGEAVVFTGATEDRV-ALYALDGGGL--RELARLPG--FGFVSDIRGDLIAGLGF 169 (582)
T ss_dssp EETTSTTCCEECTTSCSBEEEEEEECSSCEEEEEECSSCE-EEEEEETTEE--EEEEEESS--CEEEEEEETTEEEEEEE
T ss_pred EeccCCCccccccCCCCceeeeeCCCCCeEEEEecCCCCc-eEEEccCCcE--EEeecCCC--ceEEECCCCCEEEEEEE
Confidence 533 22222333333344567777764 4555555554 5999876532 22222222 67889998877664443
Q ss_pred CC---CeEEEEeCCCCceEEeecCCCCEEEEEECCCCcEEEEe-CCC--eEEEEeCCCceeeeEEeCCC-CceeeE----
Q 024372 166 DS---GGVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYITTA-DGS--SVKFWDANHFGLVKGYNMPC-NTESAS---- 234 (268)
Q Consensus 166 ~d---~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~-~~~--~v~~wd~~~~~~~~~~~~~~-~~~~~~---- 234 (268)
+. +.|++||+.+++......+...+..++|||||++|+++ .++ .|++||+...+.. ...... ......
T Consensus 170 ~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~ 248 (582)
T 3o4h_A 170 FGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAI 248 (582)
T ss_dssp EETTEEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEE
T ss_pred cCCCCeEEEEEcCCCCCceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccc
Confidence 21 67999999998876544455668999999999998764 456 7999999877655 333222 223344
Q ss_pred ----EcCCCCCEEEeccCCCeEEEEECCCCcEE
Q 024372 235 ----LEPKLGNIFIAGGEDMWVHVFDFHTGEQI 263 (268)
Q Consensus 235 ----~~~~~~~~~~~gs~d~~i~~wd~~~g~~~ 263 (268)
++| +|.++++++.|+.+++|++ |+.+
T Consensus 249 ~~~~~sp-dg~~~~~~~~~g~~~l~~~--g~~~ 278 (582)
T 3o4h_A 249 TWLGYLP-DGRLAVVARREGRSAVFID--GERV 278 (582)
T ss_dssp EEEEECT-TSCEEEEEEETTEEEEEET--TEEE
T ss_pred cceeEcC-CCcEEEEEEcCCcEEEEEE--CCee
Confidence 777 5788899999999999998 7655
No 147
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.88 E-value=7.7e-22 Score=171.77 Aligned_cols=196 Identities=9% Similarity=-0.004 Sum_probs=145.0
Q ss_pred cCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCC-----------CCeE-----EEeeCccCcEEEEEecCCCcEEE-
Q 024372 15 HSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGET-----------GDWI-----GTFEGHKGAVWSCCLDANALFSA- 77 (268)
Q Consensus 15 h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~-----------~~~~-----~~~~~h~~~V~~~~~~~~~~~l~- 77 (268)
+...++.++++| ++.++++++.|+ +++|+... .... ..+ .|.+.|.+++|+|++.+|+
T Consensus 35 ~~~~~n~lavs~---~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~l~~spdg~~lav 109 (434)
T 2oit_A 35 PKERSSLLAVSN---KYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLV-PMKFPIHHLALSCDNLTLSA 109 (434)
T ss_dssp CCSCCBCEEEET---TTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEE-CCSSCEEEEEECTTSCEEEE
T ss_pred CCCCccEEEEec---CCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccc-cCCCcccEEEEcCCCCEEEE
Confidence 344688899985 677899999998 88875321 1111 112 3567899999999999998
Q ss_pred ---EeeCCCcEEEEeCCCC--------Ce---eeee-ccCCeEEEEEECCC-CCEEEEeeCCCeEEEEECCCCCCCCeEe
Q 024372 78 ---SGSADFTAKLWDALTG--------DE---KHSF-EHKHIVRACAFSED-THLLLTGGFEKILRIFDLNRPDAPPREV 141 (268)
Q Consensus 78 ---s~s~D~~v~iw~~~~~--------~~---~~~~-~~~~~v~~v~~~~~-~~~l~s~~~d~~i~~~d~~~~~~~~~~~ 141 (268)
+|+.|++|++||+.+. +. ...+ .|...|.+++|+|+ +++|++++.|++|++||++++.. ....
T Consensus 110 ~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~-~~~~ 188 (434)
T 2oit_A 110 CMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVK-VCAT 188 (434)
T ss_dssp EEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEE-EEEE
T ss_pred EEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcc-eeec
Confidence 8999999999998654 11 1222 37889999999997 88999999999999999986532 2223
Q ss_pred cCCcccEEEEEEeCCCCcEEEEeeCCCeEEEEeCCCCceEEeecCC--------CCEEEEEECCCCcEEEEe--CC----
Q 024372 142 GNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLETK--------SPVTSAEVSRDGRYITTA--DG---- 207 (268)
Q Consensus 142 ~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~--------~~v~~~~~s~~g~~l~~~--~~---- 207 (268)
..|...+.+++|+|++.. +++++.||.|++||++ ++....+..+ ..+.++.|++++.++++. .+
T Consensus 189 ~~~~~~v~~v~wspdg~~-lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~ 266 (434)
T 2oit_A 189 LPSTVAVTSVCWSPKGKQ-LAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLE 266 (434)
T ss_dssp ECGGGCEEEEEECTTSSC-EEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSS
T ss_pred cCCCCceeEEEEcCCCCE-EEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccC
Confidence 346778999999998665 5566678999999999 6655554321 268899999999888542 22
Q ss_pred --CeEEEEeCCCc
Q 024372 208 --SSVKFWDANHF 218 (268)
Q Consensus 208 --~~v~~wd~~~~ 218 (268)
..+++||+++.
T Consensus 267 ~~~~v~i~~l~~~ 279 (434)
T 2oit_A 267 TSPDVVMALLPKK 279 (434)
T ss_dssp SCCEEEEEECCCT
T ss_pred CCCceEEEEeccC
Confidence 24899999754
No 148
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.87 E-value=8.7e-21 Score=174.58 Aligned_cols=243 Identities=15% Similarity=0.098 Sum_probs=165.5
Q ss_pred EEeeecCC---CeeeEEEecCCCCCcEEEEEeCC---------CCeEEeeCCCCCeEEEe---eCccCcEEEEEecCCCc
Q 024372 10 LVCHGHSR---PVVDLFYSPITPDGFFLVSASKD---------SSPMLRNGETGDWIGTF---EGHKGAVWSCCLDANAL 74 (268)
Q Consensus 10 ~~~~~h~~---~v~~~~f~~~~~dg~~l~s~s~d---------~~i~iw~~~~~~~~~~~---~~h~~~V~~~~~~~~~~ 74 (268)
..+.+|.. .|.+++|+| ||++|++++.+ +.+.+||+.+++. ..+ .+|...+..++|+|||+
T Consensus 51 ~~~~~~~~~~~~v~~~~~Sp---Dg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~ 126 (723)
T 1xfd_A 51 VLIEGKKIESLRAIRYEISP---DREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQ 126 (723)
T ss_dssp EEECTTTTTTTTCSEEEECT---TSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTT
T ss_pred EEeccccccccccceEEECC---CCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCccccccccccEECCCCC
Confidence 33445554 489999985 99999999886 5666999999876 334 34555688999999999
Q ss_pred EEEEeeCCCcEEEEeCCCCCeeeeecc-CCe------------------EEEEEECCCCCEEEEeeCCC-----------
Q 024372 75 FSASGSADFTAKLWDALTGDEKHSFEH-KHI------------------VRACAFSEDTHLLLTGGFEK----------- 124 (268)
Q Consensus 75 ~l~s~s~D~~v~iw~~~~~~~~~~~~~-~~~------------------v~~v~~~~~~~~l~s~~~d~----------- 124 (268)
++|.++. +.|++||+.+++....... ... +..++|+||++.|++++.++
T Consensus 127 ~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~ 205 (723)
T 1xfd_A 127 QLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTY 205 (723)
T ss_dssp CEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCC
T ss_pred EEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeecc
Confidence 9998876 7999999988876554432 222 26899999999999887553
Q ss_pred -----------------------eEEEEECCCCCCCCeEecC------CcccEEEEEEeCCCCcEEEEeeC---CCeEEE
Q 024372 125 -----------------------ILRIFDLNRPDAPPREVGN------SSGSIRTVAWLHSDQTILSSCTD---SGGVRL 172 (268)
Q Consensus 125 -----------------------~i~~~d~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~~~~~~~~---d~~i~i 172 (268)
.+++||+.+++.. ..+.. +...+..++|+|++..+++.... +..|++
T Consensus 206 ~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~-~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~ 284 (723)
T 1xfd_A 206 TGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHD-LEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTL 284 (723)
T ss_dssp SSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCC-EECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEE
T ss_pred CCcCCCcceeccCCCCCCCCCeeEEEEEECCCCcee-EEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEE
Confidence 7999998765432 22222 25678899999988755444332 257999
Q ss_pred EeCCCCceEEeecC--CCCE----EEEEECCCCcEEEE--e-CCC------eEEEEe-CCCce--eeeEEeC-CCCcee-
Q 024372 173 WDARSGKIVQTLET--KSPV----TSAEVSRDGRYITT--A-DGS------SVKFWD-ANHFG--LVKGYNM-PCNTES- 232 (268)
Q Consensus 173 wd~~~~~~~~~~~~--~~~v----~~~~~s~~g~~l~~--~-~~~------~v~~wd-~~~~~--~~~~~~~-~~~~~~- 232 (268)
||+.++++...+.. ...+ ..++|+|||+.++. + .++ .|.+|| ..... +.+.+.. ......
T Consensus 285 ~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~ 364 (723)
T 1xfd_A 285 CDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKI 364 (723)
T ss_dssp EETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEE
T ss_pred EeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEee
Confidence 99999987765532 2222 37899999985542 3 455 466777 33333 0333322 222223
Q ss_pred eEEcCCCCCEEEecc-CC--CeEEEEECCC
Q 024372 233 ASLEPKLGNIFIAGG-ED--MWVHVFDFHT 259 (268)
Q Consensus 233 ~~~~~~~~~~~~~gs-~d--~~i~~wd~~~ 259 (268)
..+++ +|+.|+..+ .+ +.+++|++..
T Consensus 365 ~~~sp-dg~~l~~~~~~~~~~~~~l~~~~~ 393 (723)
T 1xfd_A 365 LAYDE-KGNKIYFLSTEDLPRRRQLYSANT 393 (723)
T ss_dssp EEEET-TTTEEEEEESSSCTTCCEEEEECS
T ss_pred eEEcC-CCCEEEEEEcCCCCcceEEEEEeC
Confidence 46676 687776544 44 7899999764
No 149
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.87 E-value=1.5e-19 Score=153.74 Aligned_cols=241 Identities=9% Similarity=0.076 Sum_probs=165.4
Q ss_pred cCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCC-CCCeEEEeeCcc--CcEEEEEecCCCcE--EEEee---------
Q 024372 15 HSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGE-TGDWIGTFEGHK--GAVWSCCLDANALF--SASGS--------- 80 (268)
Q Consensus 15 h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~-~~~~~~~~~~h~--~~V~~~~~~~~~~~--l~s~s--------- 80 (268)
+...+..++|+| ||++|++++.+ ++.+|++. ++++..... |. +....++|+|++++ +++++
T Consensus 38 ~~~~~~~~a~sp---dg~~l~~~~~~-~v~~~~~~~~g~~~~~~~-~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~ 112 (365)
T 1jof_A 38 QDEPISWMTFDH---ERKNIYGAAMK-KWSSFAVKSPTEIVHEAS-HPIGGHPRANDADTNTRAIFLLAAKQPPYAVYAN 112 (365)
T ss_dssp TTCCCSEEEECT---TSSEEEEEEBT-EEEEEEEEETTEEEEEEE-EECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEE
T ss_pred CCCCCcEEEECC---CCCEEEEEccc-eEEEEEECCCCCEEEeeE-eecCCCCccEEECCCCCEEEEEEecCCcceeccc
Confidence 344677899985 99999999998 89999987 787654332 21 23445789999984 55553
Q ss_pred ----CCCcEEEEeCCC-CCeeeeec-----cCCeEEEEEECCCCCEEEEee-CCCeEEEEECC-CCCCCC-eEec--CCc
Q 024372 81 ----ADFTAKLWDALT-GDEKHSFE-----HKHIVRACAFSEDTHLLLTGG-FEKILRIFDLN-RPDAPP-REVG--NSS 145 (268)
Q Consensus 81 ----~D~~v~iw~~~~-~~~~~~~~-----~~~~v~~v~~~~~~~~l~s~~-~d~~i~~~d~~-~~~~~~-~~~~--~~~ 145 (268)
.++++++|++.. +.....+. +...+..++|+|+++.++++. .++.|++||+. +++... .... .+.
T Consensus 113 ~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g 192 (365)
T 1jof_A 113 PFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPG 192 (365)
T ss_dssp EESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTT
T ss_pred eeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCC
Confidence 689999999973 55433332 345788999999999888765 46899999987 443211 1121 124
Q ss_pred ccEEEEEEeCCCCcEEEEeeCCCeEEEEeCC--CCceE---E---eecCC----C-------CEEEEE-ECCCCcEEEEe
Q 024372 146 GSIRTVAWLHSDQTILSSCTDSGGVRLWDAR--SGKIV---Q---TLETK----S-------PVTSAE-VSRDGRYITTA 205 (268)
Q Consensus 146 ~~v~~~~~~~~~~~~~~~~~~d~~i~iwd~~--~~~~~---~---~~~~~----~-------~v~~~~-~s~~g~~l~~~ 205 (268)
.....++|+|++..+++++..++.|.+|++. +++.. + .+... . .+..++ |+|||++|.++
T Consensus 193 ~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~ 272 (365)
T 1jof_A 193 DHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFAS 272 (365)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEE
T ss_pred CCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEE
Confidence 4578899999988777776667899999764 56542 1 22211 2 478899 99999987543
Q ss_pred C--CC-----eEEEEeCC-Cceeee---EEe-CCCCceeeEEcCC--CCCEEEeccC-CCeEEEEECCCC
Q 024372 206 D--GS-----SVKFWDAN-HFGLVK---GYN-MPCNTESASLEPK--LGNIFIAGGE-DMWVHVFDFHTG 260 (268)
Q Consensus 206 ~--~~-----~v~~wd~~-~~~~~~---~~~-~~~~~~~~~~~~~--~~~~~~~gs~-d~~i~~wd~~~g 260 (268)
. ++ .|.+|++. +++... ... .......++++|. +|+++++++. ++.|.+|++...
T Consensus 273 ~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 273 SRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp EEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred CCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 2 23 89999986 444332 122 2234556677774 5888888776 589999998755
No 150
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.87 E-value=1.6e-20 Score=172.47 Aligned_cols=237 Identities=11% Similarity=0.071 Sum_probs=164.8
Q ss_pred CCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCCCcEEEEeCCC----
Q 024372 17 RPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALT---- 92 (268)
Q Consensus 17 ~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw~~~~---- 92 (268)
..|.+++|+| |+ +++.+ .|+++.+||..+++... +..|...+..++|+||+++++++ .|+.|++|++.+
T Consensus 82 ~~v~~~~~sp---d~-~~~~~-~~~~i~~~d~~~~~~~~-l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~ 154 (706)
T 2z3z_A 82 FPSFRTLDAG---RG-LVVLF-TQGGLVGFDMLARKVTY-LFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEG 154 (706)
T ss_dssp CCCEEEEETT---TT-EEEEE-ETTEEEEEETTTTEEEE-EECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSC
T ss_pred cCceeEEECC---CC-eEEEE-ECCEEEEEECCCCceEE-ccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCccccc
Confidence 5699999985 74 44444 46999999999887654 45567788899999999999884 689999999988
Q ss_pred -CCeeeeeccC-Ce--------------EEEEEECCCCCEEEEee---------------------------------CC
Q 024372 93 -GDEKHSFEHK-HI--------------VRACAFSEDTHLLLTGG---------------------------------FE 123 (268)
Q Consensus 93 -~~~~~~~~~~-~~--------------v~~v~~~~~~~~l~s~~---------------------------------~d 123 (268)
++........ .. +..+.|+||++.|++++ .+
T Consensus 155 ~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~ 234 (706)
T 2z3z_A 155 MSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHH 234 (706)
T ss_dssp CCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCE
T ss_pred CCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCe
Confidence 7665433322 21 47899999999999987 44
Q ss_pred CeEEEEECCCCCCCCeEe-cCCcccEEEEEEeCCCCcEEEEeeCC----CeEEEEeCCCCceEEeec---CCC---CEEE
Q 024372 124 KILRIFDLNRPDAPPREV-GNSSGSIRTVAWLHSDQTILSSCTDS----GGVRLWDARSGKIVQTLE---TKS---PVTS 192 (268)
Q Consensus 124 ~~i~~~d~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~d----~~i~iwd~~~~~~~~~~~---~~~---~v~~ 192 (268)
..|.+||+.+++...... ..+...+..++|+|++..+++++.+. ..|++||+++++....+. ... .+..
T Consensus 235 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~ 314 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHP 314 (706)
T ss_dssp EEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSC
T ss_pred eEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCC
Confidence 679999987653211111 13456789999999888776655432 289999999984433321 111 2357
Q ss_pred EEECC--CCcEEEEe-CCCeEEEEeCC-CceeeeEEeCCCC-cee-eEEcCCCCCEEE-eccCCC----eEEEEECCCCc
Q 024372 193 AEVSR--DGRYITTA-DGSSVKFWDAN-HFGLVKGYNMPCN-TES-ASLEPKLGNIFI-AGGEDM----WVHVFDFHTGE 261 (268)
Q Consensus 193 ~~~s~--~g~~l~~~-~~~~v~~wd~~-~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~-~gs~d~----~i~~wd~~~g~ 261 (268)
+.|+| ||++++++ .++.+++|++. ..+.++.+..... ... ..+++ +++.|+ +++.++ .|+.||..+++
T Consensus 315 ~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~sp-dg~~l~~~~~~~~~~~~~l~~~d~~~~~ 393 (706)
T 2z3z_A 315 LTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDP-KGTRLYFESTEASPLERHFYCIDIKGGK 393 (706)
T ss_dssp CEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECT-TSSEEEEEESSSCTTCBEEEEEETTCCC
T ss_pred ceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcC-CCCEEEEEecCCCCceEEEEEEEcCCCC
Confidence 89999 99988765 56788888775 4455555543332 223 46666 576655 455554 78888887765
No 151
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.87 E-value=1.8e-19 Score=150.51 Aligned_cols=217 Identities=9% Similarity=0.078 Sum_probs=151.0
Q ss_pred CCeeeEEEecCCCCCcEEEEEeC-CCCeEEeeCC---CCCeEEEeeCccCcEEEEEecCCCcEEEEee-CCCcEEEEeCC
Q 024372 17 RPVVDLFYSPITPDGFFLVSASK-DSSPMLRNGE---TGDWIGTFEGHKGAVWSCCLDANALFSASGS-ADFTAKLWDAL 91 (268)
Q Consensus 17 ~~v~~~~f~~~~~dg~~l~s~s~-d~~i~iw~~~---~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s-~D~~v~iw~~~ 91 (268)
..+..++|+| +|++|++++. ++.+.+|+.. +++.+..+..+ ..+..++|+|++.++++++ .++.|++||+.
T Consensus 84 ~~~~~~~~s~---dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~ 159 (343)
T 1ri6_A 84 GSLTHISTDH---QGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL-DGCHSANISPDNRTLWVPALKQDRICLFTVS 159 (343)
T ss_dssp SCCSEEEECT---TSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCC-TTBCCCEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred CCCcEEEEcC---CCCEEEEEecCCCeEEEEECCCCccccccccccCC-CCceEEEECCCCCEEEEecCCCCEEEEEEec
Confidence 3788999985 8888877665 7889999984 44455555544 3588899999998777666 89999999998
Q ss_pred C-CCeee------eeccCCeEEEEEECCCCCEEEEe-eCCCeEEEEECCCCCCCCe---Eec-CC-----cccEEEEEEe
Q 024372 92 T-GDEKH------SFEHKHIVRACAFSEDTHLLLTG-GFEKILRIFDLNRPDAPPR---EVG-NS-----SGSIRTVAWL 154 (268)
Q Consensus 92 ~-~~~~~------~~~~~~~v~~v~~~~~~~~l~s~-~~d~~i~~~d~~~~~~~~~---~~~-~~-----~~~v~~~~~~ 154 (268)
+ +.... .......+..++|+|+++.++.+ ..++.+++|+++....... ... .. ...+..++|+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s 239 (343)
T 1ri6_A 160 DDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHIT 239 (343)
T ss_dssp TTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEEC
T ss_pred CCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEEC
Confidence 7 54422 12234568889999999966554 4889999999853221111 111 01 2245679999
Q ss_pred CCCCcEEEEeeCCCeEEEEeCC--C--CceEEeecCCCCEEEEEECCCCcEEEEe--CCCeEEEEeC--CCc--eeeeEE
Q 024372 155 HSDQTILSSCTDSGGVRLWDAR--S--GKIVQTLETKSPVTSAEVSRDGRYITTA--DGSSVKFWDA--NHF--GLVKGY 224 (268)
Q Consensus 155 ~~~~~~~~~~~~d~~i~iwd~~--~--~~~~~~~~~~~~v~~~~~s~~g~~l~~~--~~~~v~~wd~--~~~--~~~~~~ 224 (268)
|++..+++++..++.|++||++ + .+.+..+.....+..++|+|+|++++.+ .++.|.+|++ ++. +.+..+
T Consensus 240 ~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~ 319 (343)
T 1ri6_A 240 PDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRY 319 (343)
T ss_dssp TTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEE
T ss_pred CCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCccceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEcccc
Confidence 9888887777778999999998 3 3445555554558899999999977654 4689999954 444 334445
Q ss_pred eCCCCceeeEEcC
Q 024372 225 NMPCNTESASLEP 237 (268)
Q Consensus 225 ~~~~~~~~~~~~~ 237 (268)
.....+..+++.+
T Consensus 320 ~~g~~p~~i~~~~ 332 (343)
T 1ri6_A 320 AVGQGPMWVVVNA 332 (343)
T ss_dssp ECSSSCCEEEEEE
T ss_pred ccCCCCeeEEEEc
Confidence 5444455555554
No 152
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.86 E-value=4.3e-21 Score=167.03 Aligned_cols=160 Identities=13% Similarity=0.066 Sum_probs=127.6
Q ss_pred ecCCCeeeEEEecCCCCCcEEE----EEeCCCCeEEeeCCCC--------C---eEEEeeCccCcEEEEEecCC-CcEEE
Q 024372 14 GHSRPVVDLFYSPITPDGFFLV----SASKDSSPMLRNGETG--------D---WIGTFEGHKGAVWSCCLDAN-ALFSA 77 (268)
Q Consensus 14 ~h~~~v~~~~f~~~~~dg~~l~----s~s~d~~i~iw~~~~~--------~---~~~~~~~h~~~V~~~~~~~~-~~~l~ 77 (268)
.|...|.+++|+| +|++|| +|+.|++|++||+.++ + .+..+.+|.+.|.+++|+|+ +.+++
T Consensus 90 ~~~~~v~~l~~sp---dg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~la 166 (434)
T 2oit_A 90 PMKFPIHHLALSC---DNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVA 166 (434)
T ss_dssp CCSSCEEEEEECT---TSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEE
T ss_pred cCCCcccEEEEcC---CCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEE
Confidence 5777899999985 899999 8999999999997654 2 24667789999999999998 78999
Q ss_pred EeeCCCcEEEEeCCCCCeee-eeccCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEec-------CCcccEE
Q 024372 78 SGSADFTAKLWDALTGDEKH-SFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVG-------NSSGSIR 149 (268)
Q Consensus 78 s~s~D~~v~iw~~~~~~~~~-~~~~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~-------~~~~~v~ 149 (268)
+++.|++|++||+.++.... ...|...|.+++|+|+++.|++|+.|+.|++||++ +.. ..... .|...+.
T Consensus 167 s~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~-~~~~~~~~~~~~~~~~~v~ 244 (434)
T 2oit_A 167 VCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQE-KKVIPCPPFYESDHPVRVL 244 (434)
T ss_dssp EEETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCE-EEEECCCTTCCTTSCEEEE
T ss_pred EEECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-Ccc-cccccCCcccCCCCceeEE
Confidence 99999999999998876543 33477899999999999999999999999999986 221 12221 1233789
Q ss_pred EEEEeCCCCcEEEEeeCCC------eEEEEeCCCC
Q 024372 150 TVAWLHSDQTILSSCTDSG------GVRLWDARSG 178 (268)
Q Consensus 150 ~~~~~~~~~~~~~~~~~d~------~i~iwd~~~~ 178 (268)
++.|++++..+++.+..+| .+++||+++.
T Consensus 245 ~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 245 DVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred EEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 9999987665555555543 3999999865
No 153
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.86 E-value=5.6e-21 Score=175.96 Aligned_cols=236 Identities=12% Similarity=0.018 Sum_probs=161.5
Q ss_pred eEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccC---cEEEEEecCCCcEEEEeeC---------CCcEEEE
Q 024372 21 DLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKG---AVWSCCLDANALFSASGSA---------DFTAKLW 88 (268)
Q Consensus 21 ~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~---~V~~~~~~~~~~~l~s~s~---------D~~v~iw 88 (268)
+++|+| ||+++++ +.|+++++||..+++....+.+|.. .|..++|+|||+++++++. |+++++|
T Consensus 20 ~~~~s~---dg~~~~~-~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~ 95 (719)
T 1z68_A 20 FPNWIS---GQEYLHQ-SADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIY 95 (719)
T ss_dssp CCEESS---SSEEEEE-CTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEE
T ss_pred ccEECC---CCeEEEE-cCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEE
Confidence 678875 8876654 4699999999999998877776654 4899999999999988876 7899999
Q ss_pred eCCCCCeeeeeccCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEecCCcccE-----------------EEE
Q 024372 89 DALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSI-----------------RTV 151 (268)
Q Consensus 89 ~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v-----------------~~~ 151 (268)
|+.+++..........+..++|+|||+.|+.+. ++.|++||+.++.........+...+ ..+
T Consensus 96 d~~~g~~~~~~~l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~ 174 (719)
T 1z68_A 96 DLSNGEFVRGNELPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYAL 174 (719)
T ss_dssp ETTTTEECCSSCCCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCE
T ss_pred ECCCCccccceecCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccE
Confidence 998887632122235678899999999999885 78999999876542111111111112 478
Q ss_pred EEeCCCCcEEEEeeCCC---------------------------------eEEEEeCCCCceE---Ee-----ec-CCCC
Q 024372 152 AWLHSDQTILSSCTDSG---------------------------------GVRLWDARSGKIV---QT-----LE-TKSP 189 (268)
Q Consensus 152 ~~~~~~~~~~~~~~~d~---------------------------------~i~iwd~~~~~~~---~~-----~~-~~~~ 189 (268)
+|+|++..++.++.+++ .|++||+.+++.. .. +. +...
T Consensus 175 ~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 254 (719)
T 1z68_A 175 WWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYY 254 (719)
T ss_dssp EECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEE
T ss_pred EECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcce
Confidence 99999887766654422 7899999988753 21 11 2345
Q ss_pred EEEEEECCCCcEEEEeC--C---CeEEEEe----CCCceeeeEE----eCCCC-ce-----eeEEcCCCCCEEE--eccC
Q 024372 190 VTSAEVSRDGRYITTAD--G---SSVKFWD----ANHFGLVKGY----NMPCN-TE-----SASLEPKLGNIFI--AGGE 248 (268)
Q Consensus 190 v~~~~~s~~g~~l~~~~--~---~~v~~wd----~~~~~~~~~~----~~~~~-~~-----~~~~~~~~~~~~~--~gs~ 248 (268)
+..++|+||++++++.. + ..|.+|| +.++++.... ..+.. .. ...+++ +|+.++ ++..
T Consensus 255 ~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~ 333 (719)
T 1z68_A 255 FSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSY-DAISYYKIFSDK 333 (719)
T ss_dssp EEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECT-TSSCEEEEEECT
T ss_pred EEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECC-CCCeEEEEEEcc
Confidence 78999999998776532 1 2488899 7766554433 12222 22 456777 576443 3334
Q ss_pred CC--eEEEEECCCCcE
Q 024372 249 DM--WVHVFDFHTGEQ 262 (268)
Q Consensus 249 d~--~i~~wd~~~g~~ 262 (268)
++ .|++||+.+++.
T Consensus 334 ~g~~~l~~~~~~~~~~ 349 (719)
T 1z68_A 334 DGYKHIHYIKDTVENA 349 (719)
T ss_dssp TSCEEEEEESSCSTTC
T ss_pred CCceEEEEEECCCCce
Confidence 44 688888876653
No 154
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.85 E-value=3.6e-19 Score=148.35 Aligned_cols=202 Identities=15% Similarity=0.130 Sum_probs=154.0
Q ss_pred CeeeEEEecCCCCCcEE-EEEeCCCCeEEeeCCCCCeEEEeeC-c----cCcEEEEEecCCCcEEEEee-----------
Q 024372 18 PVVDLFYSPITPDGFFL-VSASKDSSPMLRNGETGDWIGTFEG-H----KGAVWSCCLDANALFSASGS----------- 80 (268)
Q Consensus 18 ~v~~~~f~~~~~dg~~l-~s~s~d~~i~iw~~~~~~~~~~~~~-h----~~~V~~~~~~~~~~~l~s~s----------- 80 (268)
.+..++|+| +|+++ ++++.++.|.+||..+++.+..+.. + ...+..++|+|++++++.++
T Consensus 35 ~~~~~~~s~---dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~ 111 (337)
T 1pby_B 35 TPMVPMVAP---GGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFE 111 (337)
T ss_dssp CCCCEEECT---TSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEE
T ss_pred CccceEEcC---CCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEeccccccccccc
Confidence 478899985 88655 5566678999999999998877763 2 22567889999998887775
Q ss_pred -CCCcEEEEeCCCCCeeeeeccCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEe------------------
Q 024372 81 -ADFTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREV------------------ 141 (268)
Q Consensus 81 -~D~~v~iw~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~------------------ 141 (268)
.++.|++||+.+++....+.....+..+.|+|+++.++++ ++.+.+||+.+++......
T Consensus 112 ~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~ 189 (337)
T 1pby_B 112 VQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVW 189 (337)
T ss_dssp ECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCC
T ss_pred ccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEe
Confidence 5799999999988887777766677889999999988877 5789999986532110000
Q ss_pred -----------------------------------------------cCCcccEEEEEEeCCCCcEEEEeeCCCeEEEEe
Q 024372 142 -----------------------------------------------GNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWD 174 (268)
Q Consensus 142 -----------------------------------------------~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~iwd 174 (268)
..+...+..++|+|++..++++ ++.|.+||
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~---~~~v~~~d 266 (337)
T 1pby_B 190 NQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA---YNVLESFD 266 (337)
T ss_dssp CCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE---ESEEEEEE
T ss_pred eeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe---CCeEEEEE
Confidence 0001123457888887765554 48999999
Q ss_pred CCCCceEEeecCCCCEEEEEECCCCcEEEE-eCCCeEEEEeCCCceeeeEEeCC
Q 024372 175 ARSGKIVQTLETKSPVTSAEVSRDGRYITT-ADGSSVKFWDANHFGLVKGYNMP 227 (268)
Q Consensus 175 ~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~-~~~~~v~~wd~~~~~~~~~~~~~ 227 (268)
+++++.+..+.....+.+++|+|+|+++.+ +.++.|++||+.+.+.+..+..+
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~~ 320 (337)
T 1pby_B 267 LEKNASIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLP 320 (337)
T ss_dssp TTTTEEEEEEECSSCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEECG
T ss_pred CCCCcCcceecCCCceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEEcC
Confidence 999998888876666789999999987654 45789999999998888777664
No 155
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.85 E-value=1e-19 Score=174.21 Aligned_cols=235 Identities=11% Similarity=0.005 Sum_probs=177.5
Q ss_pred ecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeC-----------ccCcEEEEEec-CCCcEEEEeeC
Q 024372 14 GHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEG-----------HKGAVWSCCLD-ANALFSASGSA 81 (268)
Q Consensus 14 ~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~-----------h~~~V~~~~~~-~~~~~l~s~s~ 81 (268)
+|. .+...+|+| ||++|+.+ .++.+.+|+....++. .+.+ |.+.+..++|+ |+++++++++
T Consensus 243 ~~~-~~~~~~~Sp---DG~~la~~-~~~~i~~~d~~~~~l~-~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~- 315 (1045)
T 1k32_A 243 SFT-DYYPRHLNT---DGRRILFS-KGGSIYIFNPDTEKIE-KIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS- 315 (1045)
T ss_dssp CCC-SSCEEEEEE---SSSCEEEE-ETTEEEEECTTTCCEE-ECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-
T ss_pred CCC-CcceeeEcC---CCCEEEEE-eCCEEEEecCCceEee-eeccCcccccccccccccccceeeecCCCCCEEEEEE-
Confidence 344 456778885 89988887 5899999999554443 6655 44578999999 9999988887
Q ss_pred CCcEEEEeCCCCCeeeeeccCC-eEEEEEECCCCCEEEEeeCCCeEE-EEECCCCCCCCeEecCCcccEEEEEEeCCCCc
Q 024372 82 DFTAKLWDALTGDEKHSFEHKH-IVRACAFSEDTHLLLTGGFEKILR-IFDLNRPDAPPREVGNSSGSIRTVAWLHSDQT 159 (268)
Q Consensus 82 D~~v~iw~~~~~~~~~~~~~~~-~v~~v~~~~~~~~l~s~~~d~~i~-~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 159 (268)
++.+++|+...+.......+.. .+..+.|+ +++.++.++.+..+. +||+..+. ......+...+..++|+|++..
T Consensus 316 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~--~~~l~~~~~~~~~~~~SpDG~~ 392 (1045)
T 1k32_A 316 RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGK--AEKFEENLGNVFAMGVDRNGKF 392 (1045)
T ss_dssp TTEEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCC--EEECCCCCCSEEEEEECTTSSE
T ss_pred cCEEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCC--ceEecCCccceeeeEECCCCCE
Confidence 7899999998877665555666 78999999 999999988888888 88986543 2233356678899999998876
Q ss_pred EEEEeeCCCeEEEEeCCCCceEEee-cCCCCEEEEEECCCCcEEEEe-CC----------CeEEEEeCCCceeeeEEeC-
Q 024372 160 ILSSCTDSGGVRLWDARSGKIVQTL-ETKSPVTSAEVSRDGRYITTA-DG----------SSVKFWDANHFGLVKGYNM- 226 (268)
Q Consensus 160 ~~~~~~~d~~i~iwd~~~~~~~~~~-~~~~~v~~~~~s~~g~~l~~~-~~----------~~v~~wd~~~~~~~~~~~~- 226 (268)
++ +++.++.|++||+++++....+ .+...+.+++|+|||++++.+ .+ ..|++||+...+ +..+..
T Consensus 393 la-~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~ 470 (1045)
T 1k32_A 393 AV-VANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTE 470 (1045)
T ss_dssp EE-EEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCS
T ss_pred EE-EECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCC
Confidence 55 4566799999999999987777 345567899999999988653 32 489999998876 333332
Q ss_pred CCCceeeEEcCCCCCEEEeccCCCeEEEEECCCCc
Q 024372 227 PCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGE 261 (268)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~gs~d~~i~~wd~~~g~ 261 (268)
........|++ +|++|+.++.++...+|+....+
T Consensus 471 ~~~~~~~~~sp-dG~~l~~~s~~~~~~~~~~~~~~ 504 (1045)
T 1k32_A 471 NSHDYAPAFDA-DSKNLYYLSYRSLDPSPDRVVLN 504 (1045)
T ss_dssp SSBEEEEEECT-TSCEEEEEESCCCCCEECSSSSC
T ss_pred CcccCCceEcC-CCCEEEEEecccCCcCcchhccc
Confidence 22344566776 69999998888888888865443
No 156
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.84 E-value=4.7e-19 Score=169.65 Aligned_cols=240 Identities=13% Similarity=0.036 Sum_probs=177.9
Q ss_pred EeeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCC-CCeEEEeeCccCcEEEEEecCCCcEEEEeeCCCcEEEEe
Q 024372 11 VCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGET-GDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWD 89 (268)
Q Consensus 11 ~~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~-~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw~ 89 (268)
.+.+|...+.++.|+| + .++++++.|+++++|.... +.....+..|.. +...+|+|++++++.+ .++.|++|+
T Consensus 198 ~l~~~~~~v~~~~~s~---d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~~-~~~~~~SpDG~~la~~-~~~~i~~~d 271 (1045)
T 1k32_A 198 KIVDMSTHVSSPVIVG---H-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFTD-YYPRHLNTDGRRILFS-KGGSIYIFN 271 (1045)
T ss_dssp EEECCSSCCEEEEEET---T-EEEEEECTTSSCEEEEEETTSCSCEECCCCCS-SCEEEEEESSSCEEEE-ETTEEEEEC
T ss_pred ECcCCCCcccceEEeC---C-EEEEEEeccCceEEEEEeCCCCcceEecCCCC-cceeeEcCCCCEEEEE-eCCEEEEec
Confidence 3468999999999984 5 6778888999999997643 444556666653 5667999999988887 489999999
Q ss_pred CCCCCeeeeec------------cCCeEEEEEEC-CCCCEEEEeeCCCeEEEEECCCCCCCCeEecCCcc-cEEEEEEeC
Q 024372 90 ALTGDEKHSFE------------HKHIVRACAFS-EDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSG-SIRTVAWLH 155 (268)
Q Consensus 90 ~~~~~~~~~~~------------~~~~v~~v~~~-~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~-~v~~~~~~~ 155 (268)
+...... .+. +...+..++|+ |+++.+++++ ++.+.+|++..+. ......+.+ .+..++|+
T Consensus 272 ~~~~~l~-~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~s- 346 (1045)
T 1k32_A 272 PDTEKIE-KIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTY--VLKVPEPLRIRYVRRGGD- 346 (1045)
T ss_dssp TTTCCEE-ECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSB--EEECSCCSCEEEEEECSS-
T ss_pred CCceEee-eeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCc--eEEccCCCcceEEeeeEc-
Confidence 8544333 332 22358899999 9999888887 7899999986543 223334555 78889998
Q ss_pred CCCcEEEEeeCCCeEE-EEeCCCCceEEeecCCCCEEEEEECCCCcEEEE-eCCCeEEEEeCCCceeeeEEeCCC-Ccee
Q 024372 156 SDQTILSSCTDSGGVR-LWDARSGKIVQTLETKSPVTSAEVSRDGRYITT-ADGSSVKFWDANHFGLVKGYNMPC-NTES 232 (268)
Q Consensus 156 ~~~~~~~~~~~d~~i~-iwd~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~-~~~~~v~~wd~~~~~~~~~~~~~~-~~~~ 232 (268)
++..++ .+++++.+. +||+.+++......+...+..++|+|||++|+. +.++.|++||+.+.+.......+. ....
T Consensus 347 dg~~l~-~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~ 425 (1045)
T 1k32_A 347 TKVAFI-HGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITD 425 (1045)
T ss_dssp SEEEEE-EEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCC
T ss_pred CCCeEE-EEECCCceEEEEECCCCCceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccc
Confidence 665554 445568888 999988876554444467899999999998875 467899999999887766664433 3466
Q ss_pred eEEcCCCCCEEEeccCC----------CeEEEEECCCCcEE
Q 024372 233 ASLEPKLGNIFIAGGED----------MWVHVFDFHTGEQI 263 (268)
Q Consensus 233 ~~~~~~~~~~~~~gs~d----------~~i~~wd~~~g~~~ 263 (268)
+.++| +|++|++++.+ ..|++||+.+++..
T Consensus 426 ~~~Sp-DG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~ 465 (1045)
T 1k32_A 426 FTISD-NSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIF 465 (1045)
T ss_dssp EEECT-TSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEE
T ss_pred eEECC-CCCeEEEEecCccccccCCCCCeEEEEECCCCcEE
Confidence 77777 69988887664 38999999988743
No 157
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.84 E-value=1.6e-19 Score=167.07 Aligned_cols=242 Identities=10% Similarity=-0.006 Sum_probs=166.2
Q ss_pred CCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcE-----EEEEecCCCcEEEEeeCC--------
Q 024372 16 SRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAV-----WSCCLDANALFSASGSAD-------- 82 (268)
Q Consensus 16 ~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V-----~~~~~~~~~~~l~s~s~D-------- 82 (268)
.....++.|+| ||++++++ |++|++|+..+++....+.+|.... ..++|+||+++++.++.+
T Consensus 16 ~~~~~~~~w~~---dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~ 90 (740)
T 4a5s_A 16 RLKLYSLRWIS---DHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSY 90 (740)
T ss_dssp CCCCCCEEECS---SSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCE
T ss_pred cccccccEECC---CCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEcc
Confidence 33466889985 89999886 9999999999999888888886432 336789999999988876
Q ss_pred -CcEEEEeCCCCCeeeeeccCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEecCCcccE-------------
Q 024372 83 -FTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSI------------- 148 (268)
Q Consensus 83 -~~v~iw~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v------------- 148 (268)
+.+.+||+.+++......+...+...+|||||+.||.+. ++.|++||+.++....-....+...+
T Consensus 91 ~~~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~ 169 (740)
T 4a5s_A 91 TASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEV 169 (740)
T ss_dssp EEEEEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHT
T ss_pred ceEEEEEECCCCcEEEcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchh
Confidence 456799999988766555677899999999999998874 68999999876542111111111112
Q ss_pred ----EEEEEeCCCCcEEEEeeCCC-----------------------------------eEEEEeCCC---C---ceEEe
Q 024372 149 ----RTVAWLHSDQTILSSCTDSG-----------------------------------GVRLWDARS---G---KIVQT 183 (268)
Q Consensus 149 ----~~~~~~~~~~~~~~~~~~d~-----------------------------------~i~iwd~~~---~---~~~~~ 183 (268)
..+.|+|++..++.+..++. +|++||+.+ + +....
T Consensus 170 ~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l 249 (740)
T 4a5s_A 170 FSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQI 249 (740)
T ss_dssp SSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEE
T ss_pred cCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEe
Confidence 34789999887766543322 588899998 7 33332
Q ss_pred ec------CCCCEEEEEECCCCcEEEEe--C---CCeEEEEeCCCce----ee--eEE--eCCCC------ceeeEEcCC
Q 024372 184 LE------TKSPVTSAEVSRDGRYITTA--D---GSSVKFWDANHFG----LV--KGY--NMPCN------TESASLEPK 238 (268)
Q Consensus 184 ~~------~~~~v~~~~~s~~g~~l~~~--~---~~~v~~wd~~~~~----~~--~~~--~~~~~------~~~~~~~~~ 238 (268)
.. +...+..++|+|||+.++.. . +..|++||+.+++ +. ... ..+.. .....++|
T Consensus 250 ~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fsp- 328 (740)
T 4a5s_A 250 TAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTL- 328 (740)
T ss_dssp CCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECT-
T ss_pred cCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcC-
Confidence 21 23347899999999965532 1 2369999987765 22 111 11111 22456776
Q ss_pred CCCEEE-eccC-C--CeEEEEECCCCcEEe
Q 024372 239 LGNIFI-AGGE-D--MWVHVFDFHTGEQIA 264 (268)
Q Consensus 239 ~~~~~~-~gs~-d--~~i~~wd~~~g~~~~ 264 (268)
+|+.|+ ..+. + ..|++||..+++...
T Consensus 329 DG~~l~~~~s~~~G~~~l~~~~~~~~~~~~ 358 (740)
T 4a5s_A 329 DGNSFYKIISNEEGYRHICYFQIDKKDCTF 358 (740)
T ss_dssp TSSEEEEEEECTTSCEEEEEEETTCSSCEE
T ss_pred CCCEEEEEEEcCCCceEEEEEECCCCceEe
Confidence 687766 5553 3 469999988776544
No 158
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.84 E-value=1.5e-17 Score=136.20 Aligned_cols=238 Identities=10% Similarity=0.152 Sum_probs=172.7
Q ss_pred ecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEee------CccCcEEEEEe-cCCCcEEEEeeC-CCcE
Q 024372 14 GHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFE------GHKGAVWSCCL-DANALFSASGSA-DFTA 85 (268)
Q Consensus 14 ~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~------~h~~~V~~~~~-~~~~~~l~s~s~-D~~v 85 (268)
+|.....+++++| +|+++++.+.++.|.+|+.. ++.+..+. +|...+..+++ .+++.++++... ++.|
T Consensus 27 g~~~~p~~v~~~~---~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i 102 (286)
T 1q7f_A 27 GQFTEPSGVAVNA---QNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQI 102 (286)
T ss_dssp TCBSCEEEEEECT---TCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEE
T ss_pred CccCCCceEEECC---CCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEE
Confidence 4556788999974 88888888999999999977 77776664 34567889999 577877776643 8899
Q ss_pred EEEeCCCCCeeeeec--cCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEec--CCcccEEEEEEeCCCCcEE
Q 024372 86 KLWDALTGDEKHSFE--HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVG--NSSGSIRTVAWLHSDQTIL 161 (268)
Q Consensus 86 ~iw~~~~~~~~~~~~--~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~ 161 (268)
++|+ .++.....+. +...+..++++++++++++...++.|.+||... . ...... .+......+++.+++. ++
T Consensus 103 ~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g-~-~~~~~~~~~~~~~p~~i~~~~~g~-l~ 178 (286)
T 1q7f_A 103 QIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNG-N-VLHKFGCSKHLEFPNGVVVNDKQE-IF 178 (286)
T ss_dssp EEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTS-C-EEEEEECTTTCSSEEEEEECSSSE-EE
T ss_pred EEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCC-C-EEEEeCCCCccCCcEEEEECCCCC-EE
Confidence 9999 5566665554 234678999999999888888889999999642 2 222222 2334578899888654 66
Q ss_pred EEeeCCCeEEEEeCCCCceEEeecCC---CCEEEEEECCCCcEEEEeC-CC-eEEEEeCCCceeeeEEeCCC---Cceee
Q 024372 162 SSCTDSGGVRLWDARSGKIVQTLETK---SPVTSAEVSRDGRYITTAD-GS-SVKFWDANHFGLVKGYNMPC---NTESA 233 (268)
Q Consensus 162 ~~~~~d~~i~iwd~~~~~~~~~~~~~---~~v~~~~~s~~g~~l~~~~-~~-~v~~wd~~~~~~~~~~~~~~---~~~~~ 233 (268)
++...++.|++||.. ++.+..+... ..+..++++|+|+++++.. ++ .|.+||.. .+.+..+.... .+..+
T Consensus 179 v~~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~~i 256 (286)
T 1q7f_A 179 ISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD-GQLISALESKVKHAQCFDV 256 (286)
T ss_dssp EEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT-SCEEEEEEESSCCSCEEEE
T ss_pred EEECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC-CCEEEEEcccCCCCcceeE
Confidence 666667899999974 5666666533 4588999999999887764 44 99999964 45555554432 24466
Q ss_pred EEcCCCCCEEEeccCCCeEEEEECCCCcEE
Q 024372 234 SLEPKLGNIFIAGGEDMWVHVFDFHTGEQI 263 (268)
Q Consensus 234 ~~~~~~~~~~~~gs~d~~i~~wd~~~g~~~ 263 (268)
++.+ +|+++++ +.|+.|++|+.....++
T Consensus 257 ~~~~-~g~l~vs-~~~~~v~v~~~~~~~pv 284 (286)
T 1q7f_A 257 ALMD-DGSVVLA-SKDYRLYIYRYVQLAPV 284 (286)
T ss_dssp EEET-TTEEEEE-ETTTEEEEEECSCCCCT
T ss_pred EECC-CCcEEEE-CCCCeEEEEEccccccc
Confidence 7776 6887777 56899999998765443
No 159
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.83 E-value=1.5e-18 Score=145.30 Aligned_cols=200 Identities=10% Similarity=0.044 Sum_probs=146.6
Q ss_pred CeeeEEEecCCCCCcEEE-EEeCCCCeEEeeCCCCCeEEEeeCcc------CcEEEEEecCCCcEEEEeeCC--------
Q 024372 18 PVVDLFYSPITPDGFFLV-SASKDSSPMLRNGETGDWIGTFEGHK------GAVWSCCLDANALFSASGSAD-------- 82 (268)
Q Consensus 18 ~v~~~~f~~~~~dg~~l~-s~s~d~~i~iw~~~~~~~~~~~~~h~------~~V~~~~~~~~~~~l~s~s~D-------- 82 (268)
.+..++|+| +|++++ ++..++.|.+||..+++.+..+..+. ..+..++|+|+++++++++.+
T Consensus 44 ~~~~~~~s~---dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~ 120 (349)
T 1jmx_B 44 GPGTAMMAP---DNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHY 120 (349)
T ss_dssp SSCEEEECT---TSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCE
T ss_pred CCceeEECC---CCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEccccccccccc
Confidence 567899985 887654 55678899999999999887776432 237788999999998888765
Q ss_pred ----CcEEEEeCCCCC---eeeeeccCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEecCC-----------
Q 024372 83 ----FTAKLWDALTGD---EKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNS----------- 144 (268)
Q Consensus 83 ----~~v~iw~~~~~~---~~~~~~~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~----------- 144 (268)
+.|.+||+.+++ ....+.+...+.+++|+|+++ +++++. .|.+||+.+++.. ......
T Consensus 121 ~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~~~~~--~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~ 196 (349)
T 1jmx_B 121 VVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS-LYVAGP--DIYKMDVKTGKYT-VALPLRNWNRKGYSAPD 196 (349)
T ss_dssp EECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-EEEESS--SEEEECTTTCCEE-EEECSTTCCCTTBCCCB
T ss_pred ccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCc-EEEccC--cEEEEeCCCCcee-ccccccccCCccccCcc
Confidence 899999998744 334455555688899999999 555543 4999998755321 111100
Q ss_pred ---------------------------------------------------------cccEEEEEEeC-CCCcEEEEeeC
Q 024372 145 ---------------------------------------------------------SGSIRTVAWLH-SDQTILSSCTD 166 (268)
Q Consensus 145 ---------------------------------------------------------~~~v~~~~~~~-~~~~~~~~~~~ 166 (268)
...+..++++| ++..++++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--- 273 (349)
T 1jmx_B 197 VLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--- 273 (349)
T ss_dssp CCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE---
T ss_pred ceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE---
Confidence 01234556667 66655544
Q ss_pred CCeEEEEeCCCCceEEeecCCCCEEEEEECCCCcEEEE-eCCCeEEEEeCCCceeeeEEeCC
Q 024372 167 SGGVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYITT-ADGSSVKFWDANHFGLVKGYNMP 227 (268)
Q Consensus 167 d~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~-~~~~~v~~wd~~~~~~~~~~~~~ 227 (268)
++.|.+||+++++.+..+.....+.+++++|+|++|.+ +.++.|++||+++.+.+..+..+
T Consensus 274 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 274 LNRLAKYDLKQRKLIKAANLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp ESEEEEEETTTTEEEEEEECSSCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEECS
T ss_pred cCeEEEEECccCeEEEEEcCCCCccceEECCCCCEEEEecCCCeEEEEeccccceeeeeecC
Confidence 58999999999998888876566779999999976654 45789999999999888877765
No 160
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.83 E-value=8.6e-18 Score=141.35 Aligned_cols=206 Identities=10% Similarity=0.110 Sum_probs=143.8
Q ss_pred eecCCCeeeEEEecCCCCCcEEEEEe-CCCCeEEeeCC-CCC--eEEEeeC---------ccCcEEEEEecCCCcEEEEe
Q 024372 13 HGHSRPVVDLFYSPITPDGFFLVSAS-KDSSPMLRNGE-TGD--WIGTFEG---------HKGAVWSCCLDANALFSASG 79 (268)
Q Consensus 13 ~~h~~~v~~~~f~~~~~dg~~l~s~s-~d~~i~iw~~~-~~~--~~~~~~~---------h~~~V~~~~~~~~~~~l~s~ 79 (268)
..|...+..++|+| ||++|++++ .++++.+|+.. +++ .+..+.. +...+..++|+|+++++++.
T Consensus 82 ~~~~~~p~~~a~sp---dg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~ 158 (347)
T 3hfq_A 82 VAPGTPPAYVAVDE---ARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVID 158 (347)
T ss_dssp EEESCCCSEEEEET---TTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEE
T ss_pred ecCCCCCEEEEECC---CCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEe
Confidence 45777888999985 899888888 77899999985 333 3333322 12348889999999977777
Q ss_pred eCCCcEEEEeCC-CCCeeee----eccCCeEEEEEECCCCCEEEE-eeCCCeEEEEECCCCCCCC---eEecCCc-----
Q 024372 80 SADFTAKLWDAL-TGDEKHS----FEHKHIVRACAFSEDTHLLLT-GGFEKILRIFDLNRPDAPP---REVGNSS----- 145 (268)
Q Consensus 80 s~D~~v~iw~~~-~~~~~~~----~~~~~~v~~v~~~~~~~~l~s-~~~d~~i~~~d~~~~~~~~---~~~~~~~----- 145 (268)
..++.|++|++. ++..... .........++|+|+++.+++ ...++.+.+|++....... .......
T Consensus 159 ~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~ 238 (347)
T 3hfq_A 159 LGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTA 238 (347)
T ss_dssp TTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCS
T ss_pred CCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCC
Confidence 788999999998 4443221 123335778999999996555 5678999999986421111 1111111
Q ss_pred -ccEEEEEEeCCCCcEEEEeeCCCeEEEEeCCC---CceEEeecC-CCCEEEEEECCCCcEEEEe--CCCeEEEE--eCC
Q 024372 146 -GSIRTVAWLHSDQTILSSCTDSGGVRLWDARS---GKIVQTLET-KSPVTSAEVSRDGRYITTA--DGSSVKFW--DAN 216 (268)
Q Consensus 146 -~~v~~~~~~~~~~~~~~~~~~d~~i~iwd~~~---~~~~~~~~~-~~~v~~~~~s~~g~~l~~~--~~~~v~~w--d~~ 216 (268)
.....++|+|++..+++++..++.|.+||+.. .+.+..+.. ...+..++|+|+|++|+.+ .++.|.+| |.+
T Consensus 239 ~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~ 318 (347)
T 3hfq_A 239 HNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLT 318 (347)
T ss_dssp CCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred CCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCC
Confidence 34778999999988877777789999999973 244555554 3347799999999977554 35899999 445
Q ss_pred Cceee
Q 024372 217 HFGLV 221 (268)
Q Consensus 217 ~~~~~ 221 (268)
++++.
T Consensus 319 tg~l~ 323 (347)
T 3hfq_A 319 SGKLS 323 (347)
T ss_dssp TCCEE
T ss_pred CCeEE
Confidence 55443
No 161
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.82 E-value=3e-18 Score=146.05 Aligned_cols=251 Identities=14% Similarity=0.041 Sum_probs=167.3
Q ss_pred ecEEeeecCCCeee-----EEEecCCCCCcEEEEEeC-CCC--eEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEe
Q 024372 8 VPLVCHGHSRPVVD-----LFYSPITPDGFFLVSASK-DSS--PMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASG 79 (268)
Q Consensus 8 ~~~~~~~h~~~v~~-----~~f~~~~~dg~~l~s~s~-d~~--i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~ 79 (268)
.+..+..|...... .+|+ |||++|+.++. ++. +.+||..+++......+|...+..++|+|+++.|+.+
T Consensus 22 ~~~~lt~~~~~~~~~~~~~~~~S---pDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~ 98 (388)
T 3pe7_A 22 QVTRLTPPDVTCHRNYFYQKCFT---RDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYV 98 (388)
T ss_dssp EEEECSCTTSCEECCCTTSCCBC---TTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEE
T ss_pred ceEEecCCcccccchhhcCccCC---CCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEE
Confidence 34445556655554 5666 59999999988 675 6667999998877777777776677899999999999
Q ss_pred eCCCcEEEEeCCCCCeeeeecc-CCeEEEE--EECCCCCEEEEe----------------------eCCCeEEEEECCCC
Q 024372 80 SADFTAKLWDALTGDEKHSFEH-KHIVRAC--AFSEDTHLLLTG----------------------GFEKILRIFDLNRP 134 (268)
Q Consensus 80 s~D~~v~iw~~~~~~~~~~~~~-~~~v~~v--~~~~~~~~l~s~----------------------~~d~~i~~~d~~~~ 134 (268)
+.++.+++||+.+++....... ...+... .++++++.++.. ..+..|.+||+.++
T Consensus 99 ~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g 178 (388)
T 3pe7_A 99 KDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTG 178 (388)
T ss_dssp ETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTC
T ss_pred eCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCC
Confidence 9999999999999887665543 3334333 348999988742 24577999998765
Q ss_pred CCCCeEecCCcccEEEEEEeC-CCCcEEEEeeC-----CCeEEEEeCCCCceEEeecCCC--CEEEEEECCCCcEEE-Ee
Q 024372 135 DAPPREVGNSSGSIRTVAWLH-SDQTILSSCTD-----SGGVRLWDARSGKIVQTLETKS--PVTSAEVSRDGRYIT-TA 205 (268)
Q Consensus 135 ~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~-----d~~i~iwd~~~~~~~~~~~~~~--~v~~~~~s~~g~~l~-~~ 205 (268)
+ ......+...+..+.|+| ++..++.+... ...|.++|+..++......... .+....|+|||+.|+ .+
T Consensus 179 ~--~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~ 256 (388)
T 3pe7_A 179 E--STVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVS 256 (388)
T ss_dssp C--EEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEE
T ss_pred c--eEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEe
Confidence 3 233334455688899999 77665544432 2378888887665544333332 477889999998664 33
Q ss_pred C--CC---eEEEEeCCCceeeeEEeCCC------CceeeEEcCCCCCEEEec---------cCCCeEEEEECCCCcEEe
Q 024372 206 D--GS---SVKFWDANHFGLVKGYNMPC------NTESASLEPKLGNIFIAG---------GEDMWVHVFDFHTGEQIA 264 (268)
Q Consensus 206 ~--~~---~v~~wd~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~g---------s~d~~i~~wd~~~g~~~~ 264 (268)
. +. .|.+||+.+.+.......+. ......++| +|+.++.. ..+..|++||+.+|+...
T Consensus 257 ~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~ 334 (388)
T 3pe7_A 257 YLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVG-DGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHR 334 (388)
T ss_dssp EETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEE-EECCC------------CCCCEEEEEETTTTEEEE
T ss_pred cCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEcc-CCCcceeEeeeccccccCCCCEEEEEeccCCceEE
Confidence 2 22 39999998775433222221 011224666 56666643 456789999998877543
No 162
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.82 E-value=4.9e-17 Score=136.23 Aligned_cols=236 Identities=8% Similarity=0.064 Sum_probs=177.3
Q ss_pred CCCeeeEEEecCCCCCcEEEEEeCC------------------------CCeEEeeCCCCCeEEEee-CccCcEEEEEec
Q 024372 16 SRPVVDLFYSPITPDGFFLVSASKD------------------------SSPMLRNGETGDWIGTFE-GHKGAVWSCCLD 70 (268)
Q Consensus 16 ~~~v~~~~f~~~~~dg~~l~s~s~d------------------------~~i~iw~~~~~~~~~~~~-~h~~~V~~~~~~ 70 (268)
.+.+.+++++| +|+++++.+.+ ++|.+||..+++.+..+. ++-.....++++
T Consensus 23 l~~v~~va~d~---~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d 99 (329)
T 3fvz_A 23 PGQVSGVALDS---KNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSID 99 (329)
T ss_dssp CSCEEEEEECT---TCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEEC
T ss_pred cCCceEEEECC---CCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEEC
Confidence 45789999985 89999988888 479999999999887765 455678899999
Q ss_pred CCCcEEEEeeCCCcEEEEeCCCCC-eeeeec----------cCCeEEEEEECC-CCCEEEEee-CCCeEEEEECCCCCCC
Q 024372 71 ANALFSASGSADFTAKLWDALTGD-EKHSFE----------HKHIVRACAFSE-DTHLLLTGG-FEKILRIFDLNRPDAP 137 (268)
Q Consensus 71 ~~~~~l~s~s~D~~v~iw~~~~~~-~~~~~~----------~~~~v~~v~~~~-~~~~l~s~~-~d~~i~~~d~~~~~~~ 137 (268)
+++.++++...++.|++|+..... .+..+. +-.....++++| ++.++++.+ .++.|++||.. +..
T Consensus 100 ~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~-g~~- 177 (329)
T 3fvz_A 100 TDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPS-GKF- 177 (329)
T ss_dssp TTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTT-SCE-
T ss_pred CCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCC-CCE-
Confidence 999988998899999999986542 344432 222578899999 888888876 68999999943 322
Q ss_pred CeEecC----------CcccEEEEEEeCCCCcEEEEeeCCCeEEEEeCCCCceEEeecC---CCCEEEEEECCCCcEEEE
Q 024372 138 PREVGN----------SSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLET---KSPVTSAEVSRDGRYITT 204 (268)
Q Consensus 138 ~~~~~~----------~~~~v~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~---~~~v~~~~~s~~g~~l~~ 204 (268)
...+.. +......+++.++++.++++...++.|++||..+++.+.++.. ...+..++++| +..+..
T Consensus 178 ~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~ 256 (329)
T 3fvz_A 178 VTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFAV 256 (329)
T ss_dssp EEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEEE
T ss_pred EEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CEEEEe
Confidence 222221 1123678999988677888888889999999999999888742 34578999999 433332
Q ss_pred e--------CCCeEEEEeCCCceeeeEEeC----CCCceeeEEcCCCCCEEEeccCCCeEEEEECC
Q 024372 205 A--------DGSSVKFWDANHFGLVKGYNM----PCNTESASLEPKLGNIFIAGGEDMWVHVFDFH 258 (268)
Q Consensus 205 ~--------~~~~v~~wd~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~gs~d~~i~~wd~~ 258 (268)
. .+..|++||..+++.+..+.. -..+..+++.+ +|.++++...++.|++|+..
T Consensus 257 ~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~-dG~lyvad~~~~~I~~~~~~ 321 (329)
T 3fvz_A 257 NGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASE-DGTVYIGDAHTNTVWKFTLT 321 (329)
T ss_dssp ECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECT-TSEEEEEESSSCCEEEEEEE
T ss_pred CCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECC-CCCEEEEECCCCEEEEEeCC
Confidence 2 234899999999888887742 22355677777 58888898999999999975
No 163
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.80 E-value=6.6e-18 Score=143.93 Aligned_cols=239 Identities=10% Similarity=0.015 Sum_probs=160.4
Q ss_pred eecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEE--ecCCCcEEEE------------
Q 024372 13 HGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCC--LDANALFSAS------------ 78 (268)
Q Consensus 13 ~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~--~~~~~~~l~s------------ 78 (268)
.+|...+.++.|+| ||++|+.++.++.+.+||+.+++....+..+.+.+.... +++++.+++.
T Consensus 77 ~~~~~~~~~~~~sp---dg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~ 153 (388)
T 3pe7_A 77 EGRGDNTFGGFLSP---DDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLT 153 (388)
T ss_dssp CSSCBCSSSCEECT---TSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCC
T ss_pred eCCCCCccceEEcC---CCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCccccccc
Confidence 45555666778884 999999999999999999999987766766666664444 4899988763
Q ss_pred ----------eeCCCcEEEEeCCCCCeeeeeccCCeEEEEEECC-CCCEEEEeeCC------CeEEEEECCCCCCCCeEe
Q 024372 79 ----------GSADFTAKLWDALTGDEKHSFEHKHIVRACAFSE-DTHLLLTGGFE------KILRIFDLNRPDAPPREV 141 (268)
Q Consensus 79 ----------~s~D~~v~iw~~~~~~~~~~~~~~~~v~~v~~~~-~~~~l~s~~~d------~~i~~~d~~~~~~~~~~~ 141 (268)
.+.+..|++||+.+++......+...+..+.|+| +++.|+....+ ..|.++|+.... ...+
T Consensus 154 ~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~--~~~l 231 (388)
T 3pe7_A 154 DWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTN--MRKV 231 (388)
T ss_dssp SHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCC--CEES
T ss_pred ccchhhhhhccCCcceEEEEECCCCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCc--eEEe
Confidence 2245789999999988776667777889999999 99988876653 367777765432 2333
Q ss_pred cCCc--ccEEEEEEeCCCCcEEEEeeCCC----eEEEEeCCCCceEE--eecCCCC----EEEEEECCCCcEEEE-----
Q 024372 142 GNSS--GSIRTVAWLHSDQTILSSCTDSG----GVRLWDARSGKIVQ--TLETKSP----VTSAEVSRDGRYITT----- 204 (268)
Q Consensus 142 ~~~~--~~v~~~~~~~~~~~~~~~~~~d~----~i~iwd~~~~~~~~--~~~~~~~----v~~~~~s~~g~~l~~----- 204 (268)
..+. ..+....|+|++..++..+..++ .|.+||+.+++... .+..... .....|+|||+.++.
T Consensus 232 ~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 311 (388)
T 3pe7_A 232 KTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDD 311 (388)
T ss_dssp CCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC-------
T ss_pred eeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeec
Confidence 2222 24677899999987755544322 39999999987533 2322000 112368999987653
Q ss_pred -----eCCCeEEEEeCCCceeeeEEeCCC-----------CceeeEEcCCCCCEEEecc-CCCeEEEEEC
Q 024372 205 -----ADGSSVKFWDANHFGLVKGYNMPC-----------NTESASLEPKLGNIFIAGG-EDMWVHVFDF 257 (268)
Q Consensus 205 -----~~~~~v~~wd~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~gs-~d~~i~~wd~ 257 (268)
..+..|.+||+...+......... ......++| +|+.|+..+ .++...+|.+
T Consensus 312 ~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~sp-Dg~~l~~~s~~~g~~~l~~~ 380 (388)
T 3pe7_A 312 SGYKIENDPFLYVFNMKNGTQHRVARHDTSWKVFEGDRQVTHPHPSFTP-DDKQILFTSDVHGKPALYLA 380 (388)
T ss_dssp -----CCCCEEEEEETTTTEEEEEEECCCCCCCBTTBSSTTCCCCEECT-TSSEEEEEECTTSSCEEEEE
T ss_pred cccccCCCCEEEEEeccCCceEEeccccCcccccccccccCCCCccCCC-CCCEEEEEecCCCceeEEEE
Confidence 234689999998765533333322 244567777 687776544 4665555543
No 164
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.79 E-value=5.3e-18 Score=152.56 Aligned_cols=198 Identities=11% Similarity=0.013 Sum_probs=140.3
Q ss_pred ccCcEEEEEecCCCcEEEEeeC-CCcEEEEeCCCCCeeeeeccC-CeEEEEEECCCCCEEEEeeC---CCeEEEEECCC-
Q 024372 60 HKGAVWSCCLDANALFSASGSA-DFTAKLWDALTGDEKHSFEHK-HIVRACAFSEDTHLLLTGGF---EKILRIFDLNR- 133 (268)
Q Consensus 60 h~~~V~~~~~~~~~~~l~s~s~-D~~v~iw~~~~~~~~~~~~~~-~~v~~v~~~~~~~~l~s~~~---d~~i~~~d~~~- 133 (268)
+..+|++++|+|||++||+++. |++++||++.++...+...+. ..+..+.|+|+ +++++++. +...++|.++.
T Consensus 20 ~~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~ 98 (582)
T 3o4h_A 20 IAVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTS 98 (582)
T ss_dssp HHSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETT
T ss_pred hccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEecc
Confidence 3568999999999999998886 999999998766665555555 58999999999 78877765 55567765533
Q ss_pred -CCCCCeEecCCcccEEEEEEeCCCCcEEEEeeCCCeEEEEeCCCCceEEeecCCCCEEEEEECCCCcEEEE-eCC----
Q 024372 134 -PDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYITT-ADG---- 207 (268)
Q Consensus 134 -~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~-~~~---- 207 (268)
.... ....... .....+|+|++..++.++..++.+.|||+.+++......... .+++|+|||+++++ +.+
T Consensus 99 ~~g~~-~~l~~~~-~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~~~~~~~~~ 174 (582)
T 3o4h_A 99 RPGEE-QRLEAVK-PMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG--FGFVSDIRGDLIAGLGFFGGGR 174 (582)
T ss_dssp STTCC-EECTTSC-SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS--CEEEEEEETTEEEEEEEEETTE
T ss_pred CCCcc-ccccCCC-CceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC--ceEEECCCCCEEEEEEEcCCCC
Confidence 2222 2222222 234567888876644443444566699999988766554433 78999999999874 333
Q ss_pred CeEEEEeCCCceeeeEEeCCCCceeeEEcCCCCCEEEeccCCC--eEEEEECCCCcEE
Q 024372 208 SSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGGEDM--WVHVFDFHTGEQI 263 (268)
Q Consensus 208 ~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~d~--~i~~wd~~~g~~~ 263 (268)
..|++||+.+.+...............++| +|++|+++..++ .|++||+.+|+..
T Consensus 175 ~~i~~~d~~~g~~~~l~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 175 VSLFTSNLSSGGLRVFDSGEGSFSSASISP-GMKVTAGLETAREARLVTVDPRDGSVE 231 (582)
T ss_dssp EEEEEEETTTCCCEEECCSSCEEEEEEECT-TSCEEEEEECSSCEEEEEECTTTCCEE
T ss_pred eEEEEEcCCCCCceEeecCCCccccceECC-CCCEEEEccCCCeeEEEEEcCCCCcEE
Confidence 679999998766543222233345677777 699999777788 8999999988876
No 165
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.79 E-value=3.3e-17 Score=149.38 Aligned_cols=251 Identities=11% Similarity=-0.028 Sum_probs=161.8
Q ss_pred EEeeecCCCee---------eEEEecCCCCCcE-EEEEeC-CCCeEEeeCC--C-CCeEEEeeC-----ccCcEEEEEec
Q 024372 10 LVCHGHSRPVV---------DLFYSPITPDGFF-LVSASK-DSSPMLRNGE--T-GDWIGTFEG-----HKGAVWSCCLD 70 (268)
Q Consensus 10 ~~~~~h~~~v~---------~~~f~~~~~dg~~-l~s~s~-d~~i~iw~~~--~-~~~~~~~~~-----h~~~V~~~~~~ 70 (268)
..+.+|...+. ...|+ .+|||++ |+.++. +..|.+++.. . ++ ...+.. |...+..++|+
T Consensus 61 ~~l~~~~~~~~~~~~~~~~~~~~~~-~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~s 138 (662)
T 3azo_A 61 ESALPAPWNVRNRVFEYSGFPWAGV-PRPAGGPLLVFTHFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLL 138 (662)
T ss_dssp EESSCTTCCBCCCGGGTCCCCEEEE-CCSSSSCEEEEEBTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEE
T ss_pred ceeCCCCccccccccccCCccceee-eecCCCeEEEEEECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEEC
Confidence 33445665655 55565 1258988 665543 3444455554 2 43 445655 67789999999
Q ss_pred CCCcEEEEeeCC----------CcEEEEeCCC------CCeeeee-ccCCeEEEEEECCCCCEEEEeeCC--------Ce
Q 024372 71 ANALFSASGSAD----------FTAKLWDALT------GDEKHSF-EHKHIVRACAFSEDTHLLLTGGFE--------KI 125 (268)
Q Consensus 71 ~~~~~l~s~s~D----------~~v~iw~~~~------~~~~~~~-~~~~~v~~v~~~~~~~~l~s~~~d--------~~ 125 (268)
||++.|++++.| ..|++||+.+ +...... .+...+..+.|+|||+.|+.++.+ ..
T Consensus 139 pDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~ 218 (662)
T 3azo_A 139 PERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTE 218 (662)
T ss_dssp TTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEE
T ss_pred CCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcE
Confidence 999999988877 5899999988 5555444 455678889999999999987755 37
Q ss_pred EEEEECC-CCC--CCCeEecCCcccEEEEEEeCCCCcEEEEeeCCC--eEEEEeCCCCceEEeecCCCC---------EE
Q 024372 126 LRIFDLN-RPD--APPREVGNSSGSIRTVAWLHSDQTILSSCTDSG--GVRLWDARSGKIVQTLETKSP---------VT 191 (268)
Q Consensus 126 i~~~d~~-~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~--~i~iwd~~~~~~~~~~~~~~~---------v~ 191 (268)
|.+||+. ++. ........+...+..+.|+|++. +++++..++ .|.+||+.+++.......+.. +.
T Consensus 219 i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~-l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~ 297 (662)
T 3azo_A 219 LKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGS-LIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMR 297 (662)
T ss_dssp EEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSC-EEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCC
T ss_pred EEEEEECCCCcccccEEeCCCCCceEcceEECCCCe-EEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCc
Confidence 9999987 331 12222333456788999999888 666666667 677788877776554443221 45
Q ss_pred EEEECCCCcEEEEeCCCeEEEE--eCCCceeeeEEeCCCCceeeEEcCCCCCEEEe-ccCCC--eEEEEECCCCcEEe
Q 024372 192 SAEVSRDGRYITTADGSSVKFW--DANHFGLVKGYNMPCNTESASLEPKLGNIFIA-GGEDM--WVHVFDFHTGEQIA 264 (268)
Q Consensus 192 ~~~~s~~g~~l~~~~~~~v~~w--d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-gs~d~--~i~~wd~~~g~~~~ 264 (268)
.++++|++++++++..+.+++| |+...+ ++.+..+.......+.++.+.++++ ++.+. .|++||+.+|+...
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~ 374 (662)
T 3azo_A 298 WFAPLANGLIAVVHGKGAAVLGILDPESGE-LVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRART 374 (662)
T ss_dssp SEEECTTSCEEEEEBSSSCEEEEEETTTTE-EEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCEEE
T ss_pred eEeEeCCCEEEEEEEcCccEEEEEECCCCc-EEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCceEE
Confidence 7889999998876533788888 655444 4445444332222213333344444 44454 46666777777544
No 166
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.78 E-value=4.7e-16 Score=131.48 Aligned_cols=228 Identities=11% Similarity=0.069 Sum_probs=149.3
Q ss_pred CcEEEEEe----CCCCeEEee--CCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCC----CcEEEEeCCC--CCee--
Q 024372 31 GFFLVSAS----KDSSPMLRN--GETGDWIGTFEGHKGAVWSCCLDANALFSASGSAD----FTAKLWDALT--GDEK-- 96 (268)
Q Consensus 31 g~~l~s~s----~d~~i~iw~--~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D----~~v~iw~~~~--~~~~-- 96 (268)
..+++.|+ .++.|.+|. ..++++......|......++|+|+++++++++.+ +.+.+|++.. +...
T Consensus 13 ~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~ 92 (361)
T 3scy_A 13 ELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLL 92 (361)
T ss_dssp EEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEE
T ss_pred ceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEe
Confidence 44566664 456788874 46676543222266777889999999999888875 7999998865 3322
Q ss_pred eeec-cCCeEEEEEECCCCCEEEEee-CCCeEEEEECCCCCCCC---eEecC----------CcccEEEEEEeCCCCcEE
Q 024372 97 HSFE-HKHIVRACAFSEDTHLLLTGG-FEKILRIFDLNRPDAPP---REVGN----------SSGSIRTVAWLHSDQTIL 161 (268)
Q Consensus 97 ~~~~-~~~~v~~v~~~~~~~~l~s~~-~d~~i~~~d~~~~~~~~---~~~~~----------~~~~v~~~~~~~~~~~~~ 161 (268)
.... +......+++ +++.+++++ .++.+.+|++....... ..... +...+.+++|+|++..++
T Consensus 93 ~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~ 170 (361)
T 3scy_A 93 NTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLL 170 (361)
T ss_dssp EEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEE
T ss_pred eEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEE
Confidence 2222 3345566677 777777666 67899999986432211 11110 122357799999988788
Q ss_pred EEeeCCCeEEEEeCCCCc-------e-------EEeecCCCCEEEEEECCCCcEEEE-e-CCCeEEEEeCCCcee--eeE
Q 024372 162 SSCTDSGGVRLWDARSGK-------I-------VQTLETKSPVTSAEVSRDGRYITT-A-DGSSVKFWDANHFGL--VKG 223 (268)
Q Consensus 162 ~~~~~d~~i~iwd~~~~~-------~-------~~~~~~~~~v~~~~~s~~g~~l~~-~-~~~~v~~wd~~~~~~--~~~ 223 (268)
+++..++.|++|++.... . .........+..++|+|+|+++.. . .++.|.+||+..... +..
T Consensus 171 ~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~ 250 (361)
T 3scy_A 171 ADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQT 250 (361)
T ss_dssp EEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEE
T ss_pred EEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEE
Confidence 777777899999886533 1 222334456789999999997654 4 478999999876543 333
Q ss_pred EeCC----CCceeeEEcCCCCCEEEecc-C-CCeEEEEECC--CCc
Q 024372 224 YNMP----CNTESASLEPKLGNIFIAGG-E-DMWVHVFDFH--TGE 261 (268)
Q Consensus 224 ~~~~----~~~~~~~~~~~~~~~~~~gs-~-d~~i~~wd~~--~g~ 261 (268)
.... .....+.++| +|++|+++. . ++.|.+|++. +|+
T Consensus 251 ~~~~~~~~~~~~~i~~sp-dg~~l~v~~~~~~~~i~v~~~~~~~g~ 295 (361)
T 3scy_A 251 VAADTVNAQGSGDIHLSP-DGKYLYASNRLKADGVAIFKVDETNGT 295 (361)
T ss_dssp EESCSSCCCCEEEEEECT-TSSEEEEEECSSSCEEEEEEECTTTCC
T ss_pred EecCCCCCCCcccEEECC-CCCEEEEECCCCCCEEEEEEEcCCCCc
Confidence 3221 1234667777 688776554 4 5889999985 555
No 167
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.78 E-value=1.3e-15 Score=125.35 Aligned_cols=241 Identities=10% Similarity=0.018 Sum_probs=172.7
Q ss_pred EEeeecCCCeeeEEEecCCCCCc-EEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCCCcEEEE
Q 024372 10 LVCHGHSRPVVDLFYSPITPDGF-FLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLW 88 (268)
Q Consensus 10 ~~~~~h~~~v~~~~f~~~~~dg~-~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw 88 (268)
..+..+.....+++|+| +|+ +++++..++.|..|+..++ ...+..+...+..+++++++.++++...++.|.+|
T Consensus 21 ~~l~~~~~~~eg~~~d~---~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~ 95 (296)
T 3e5z_A 21 RRLADGFTWTEGPVYVP---ARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQ 95 (296)
T ss_dssp EEEECCCSSEEEEEEEG---GGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEE
T ss_pred EEEecCCccccCCeEeC---CCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEE
Confidence 33445667778999986 787 7888999999999999887 66777788889999999999988887778999999
Q ss_pred eCCCCCeeeeecc-----CCeEEEEEECCCCCEEEE----eeC-------------CCeEEEEECCCCCCCCeEecCCcc
Q 024372 89 DALTGDEKHSFEH-----KHIVRACAFSEDTHLLLT----GGF-------------EKILRIFDLNRPDAPPREVGNSSG 146 (268)
Q Consensus 89 ~~~~~~~~~~~~~-----~~~v~~v~~~~~~~~l~s----~~~-------------d~~i~~~d~~~~~~~~~~~~~~~~ 146 (268)
|..++........ ...+..++++|+|+++++ |.. .+.|..++.. + ..........
T Consensus 96 d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g--~~~~~~~~~~ 172 (296)
T 3e5z_A 96 REPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-G--TLSAPIRDRV 172 (296)
T ss_dssp CSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-S--CEEEEECCCS
T ss_pred cCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-C--CEEEeecCCC
Confidence 9987775443321 123567899999998887 331 2355555543 2 2233333445
Q ss_pred cEEEEEEeCCCCcEEEEeeCCCeEEEEeCC-CCce---EEeec-CCCCEEEEEECCCCcEEEEeCCCeEEEEeCCCceee
Q 024372 147 SIRTVAWLHSDQTILSSCTDSGGVRLWDAR-SGKI---VQTLE-TKSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLV 221 (268)
Q Consensus 147 ~v~~~~~~~~~~~~~~~~~~d~~i~iwd~~-~~~~---~~~~~-~~~~v~~~~~s~~g~~l~~~~~~~v~~wd~~~~~~~ 221 (268)
....++|+|++..+ ++.+.++.|.+||+. +++. ...+. ....+..++++++|+++++. ++.|.+||.. .+.+
T Consensus 173 ~~~gi~~s~dg~~l-v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~-~~~v~~~~~~-g~~~ 249 (296)
T 3e5z_A 173 KPNGLAFLPSGNLL-VSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA-GDGVHVLTPD-GDEL 249 (296)
T ss_dssp SEEEEEECTTSCEE-EEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE-TTEEEEECTT-SCEE
T ss_pred CCccEEECCCCCEE-EEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc-CCeEEEECCC-CCEE
Confidence 56889999988776 666777899999986 5554 23332 12335689999999988777 7899999986 5667
Q ss_pred eEEeCCCCceeeEEcCCCCCEEEeccCCCeEEEEECCCCcE
Q 024372 222 KGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQ 262 (268)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~gs~d~~i~~wd~~~g~~ 262 (268)
..+..+..+..+++..++++.|++++.++ +..++.++.+.
T Consensus 250 ~~~~~~~~~~~~~f~~~d~~~L~v~t~~~-l~~~~~~~~~~ 289 (296)
T 3e5z_A 250 GRVLTPQTTSNLCFGGPEGRTLYMTVSTE-FWSIETNVRGL 289 (296)
T ss_dssp EEEECSSCCCEEEEESTTSCEEEEEETTE-EEEEECSCCBC
T ss_pred EEEECCCCceeEEEECCCCCEEEEEcCCe-EEEEEcccccc
Confidence 77776655566666544677777777664 66667766543
No 168
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.78 E-value=8.5e-19 Score=161.40 Aligned_cols=231 Identities=10% Similarity=0.058 Sum_probs=154.6
Q ss_pred CeeeEEEecCCCCCcEEEEEeC---------CCCeEEeeCCCCCeE--EEeeCccCcEEEEEecCCCcEEEEeeCCCcEE
Q 024372 18 PVVDLFYSPITPDGFFLVSASK---------DSSPMLRNGETGDWI--GTFEGHKGAVWSCCLDANALFSASGSADFTAK 86 (268)
Q Consensus 18 ~v~~~~f~~~~~dg~~l~s~s~---------d~~i~iw~~~~~~~~--~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~ 86 (268)
.|.+++|+| ||++|+.++. |+++.+||+.+++.+ ..+ ...+..++|+|||++||.++ |+.|+
T Consensus 61 ~~~~~~~Sp---Dg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~ 133 (719)
T 1z68_A 61 NASNYGLSP---DRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIY 133 (719)
T ss_dssp TCSEEEECT---TSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEE
T ss_pred ceeeEEECC---CCCeEEEEecCceeEEeecceEEEEEECCCCccccceec---CcccccceECCCCCEEEEEE-CCeEE
Confidence 488999985 9999999987 789999999998763 223 35688899999999998875 78999
Q ss_pred EEeCCCCCeeeeec--cCCeE-----------------EEEEECCCCCEEEEeeCCC-----------------------
Q 024372 87 LWDALTGDEKHSFE--HKHIV-----------------RACAFSEDTHLLLTGGFEK----------------------- 124 (268)
Q Consensus 87 iw~~~~~~~~~~~~--~~~~v-----------------~~v~~~~~~~~l~s~~~d~----------------------- 124 (268)
+|++.++....... +...+ ..++|+|||+.|++++.|.
T Consensus 134 ~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 213 (719)
T 1z68_A 134 LKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIP 213 (719)
T ss_dssp EESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEE
T ss_pred EEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeec
Confidence 99998877654321 11212 4799999999999987652
Q ss_pred -----------eEEEEECCCCCCC----C---eEecCCcccEEEEEEeCCCCcEEEEeeCC----CeEEEEe----CCCC
Q 024372 125 -----------ILRIFDLNRPDAP----P---REVGNSSGSIRTVAWLHSDQTILSSCTDS----GGVRLWD----ARSG 178 (268)
Q Consensus 125 -----------~i~~~d~~~~~~~----~---~~~~~~~~~v~~~~~~~~~~~~~~~~~~d----~~i~iwd----~~~~ 178 (268)
.+++||+.++... . ..+..+...+..++|+|++ .++++..+. ..|.+|| +.++
T Consensus 214 yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~-~~~~~~~~~~~~~~~l~~~d~~~~~~~g 292 (719)
T 1z68_A 214 YPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDE-RVCLQWLKRVQNVSVLSICDFREDWQTW 292 (719)
T ss_dssp CCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSS-EEEEEEEESSTTEEEEEEEEECSSSSSE
T ss_pred CCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCC-eEEEEEeccccCeEEEEEEcccCCCCCC
Confidence 7889998754321 0 1122466678999999985 455443321 2488899 8887
Q ss_pred ceEEee----cC-CCCEE-----EEEECCCCcEEE--Ee-CCC--eEEEEeCCCceeeeEEeCC-CCceeeEEcCCCCCE
Q 024372 179 KIVQTL----ET-KSPVT-----SAEVSRDGRYIT--TA-DGS--SVKFWDANHFGLVKGYNMP-CNTESASLEPKLGNI 242 (268)
Q Consensus 179 ~~~~~~----~~-~~~v~-----~~~~s~~g~~l~--~~-~~~--~v~~wd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 242 (268)
++...+ .. ...+. .+.|+|||+.++ ++ .++ .|.+||+...+ .+.+... .......++ +++.
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~lt~~~~~v~~~~~~--d~~~ 369 (719)
T 1z68_A 293 DCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-AIQITSGKWEAINIFRV--TQDS 369 (719)
T ss_dssp ECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-CEECSCSSSCEEEEEEE--CSSE
T ss_pred ceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc-eEecccCceEEEEEEEE--eCCE
Confidence 765544 22 23344 789999998543 33 333 57788886654 2233222 223334444 3555
Q ss_pred EE-eccC----CCeEEEEECCC
Q 024372 243 FI-AGGE----DMWVHVFDFHT 259 (268)
Q Consensus 243 ~~-~gs~----d~~i~~wd~~~ 259 (268)
++ ++.. ++.+++|.+..
T Consensus 370 i~~~~~~~~~~~~~~~l~~~~~ 391 (719)
T 1z68_A 370 LFYSSNEFEEYPGRRNIYRISI 391 (719)
T ss_dssp EEEEESCGGGCTTCBEEEEEEC
T ss_pred EEEEEecCCCCCceEEEEEEeC
Confidence 55 4444 47788887653
No 169
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.77 E-value=1.9e-16 Score=144.43 Aligned_cols=245 Identities=11% Similarity=-0.024 Sum_probs=165.1
Q ss_pred eeecCCCeeeEEEecCCCCCcEEEEE--eCCCCeEEeeCCCCCeEEEeeCccCcEE---------EEEec--CCCcE-EE
Q 024372 12 CHGHSRPVVDLFYSPITPDGFFLVSA--SKDSSPMLRNGETGDWIGTFEGHKGAVW---------SCCLD--ANALF-SA 77 (268)
Q Consensus 12 ~~~h~~~v~~~~f~~~~~dg~~l~s~--s~d~~i~iw~~~~~~~~~~~~~h~~~V~---------~~~~~--~~~~~-l~ 77 (268)
+.+|...+..++|++ ++.++++. +.++...||....+.....+..|...+. ...++ ||++. ++
T Consensus 19 ~~~~~~~~~~~~~s~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la 95 (662)
T 3azo_A 19 VASRSGRPACVGAVG---DEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLV 95 (662)
T ss_dssp HHHTCSCCEEEEEET---TEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEE
T ss_pred HhhcCCccceeEEcC---CeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEE
Confidence 347999999999984 77677776 5588889998555555666777766655 55555 99987 76
Q ss_pred Eee-CCCcEEEEeCC--C-CCeeeeec-----cCCeEEEEEECCCCCEEEEeeCC----------CeEEEEECCCCC---
Q 024372 78 SGS-ADFTAKLWDAL--T-GDEKHSFE-----HKHIVRACAFSEDTHLLLTGGFE----------KILRIFDLNRPD--- 135 (268)
Q Consensus 78 s~s-~D~~v~iw~~~--~-~~~~~~~~-----~~~~v~~v~~~~~~~~l~s~~~d----------~~i~~~d~~~~~--- 135 (268)
..+ .+..|.+|++. . +....... +...+..++|+||++.|++++.+ ..|.+||+....
T Consensus 96 ~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 175 (662)
T 3azo_A 96 FTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAAD 175 (662)
T ss_dssp EEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTC
T ss_pred EEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCcccc
Confidence 554 35677777775 3 44333223 45568899999999999988876 589999987610
Q ss_pred -CCCeEec-CCcccEEEEEEeCCCCcEEEEeeCC-------CeEEEEeCC-CC---ceEEeecC-CCCEEEEEECCCCcE
Q 024372 136 -APPREVG-NSSGSIRTVAWLHSDQTILSSCTDS-------GGVRLWDAR-SG---KIVQTLET-KSPVTSAEVSRDGRY 201 (268)
Q Consensus 136 -~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~d-------~~i~iwd~~-~~---~~~~~~~~-~~~v~~~~~s~~g~~ 201 (268)
.....+. .+...+..++|+|++..++.++.+. ..|++||+. ++ +....... ...+..+.|+|||++
T Consensus 176 ~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l 255 (662)
T 3azo_A 176 RSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSL 255 (662)
T ss_dssp GGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCE
T ss_pred CCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeE
Confidence 1233333 3445677789999988776665443 479999998 57 44443333 456889999999997
Q ss_pred EEEeC-CC--eEEEEeCCCceeeeEEeCCCC---------ceeeEEcCCCCCEEEeccCCCeEEEE--ECCCCc
Q 024372 202 ITTAD-GS--SVKFWDANHFGLVKGYNMPCN---------TESASLEPKLGNIFIAGGEDMWVHVF--DFHTGE 261 (268)
Q Consensus 202 l~~~~-~~--~v~~wd~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~gs~d~~i~~w--d~~~g~ 261 (268)
+++++ ++ .|.+||+...+.......+.. ...+.+++ +++++++++. +.+++| |..+++
T Consensus 256 ~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~-~~~~~~~~~~-~~~~l~~~d~~~~~ 327 (662)
T 3azo_A 256 IVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLA-NGLIAVVHGK-GAAVLGILDPESGE 327 (662)
T ss_dssp EEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECT-TSCEEEEEBS-SSCEEEEEETTTTE
T ss_pred EEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeC-CCEEEEEEEc-CccEEEEEECCCCc
Confidence 66653 45 677777755544332222211 22445555 5888888888 888888 655555
No 170
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.76 E-value=2.2e-17 Score=140.73 Aligned_cols=237 Identities=13% Similarity=0.057 Sum_probs=154.1
Q ss_pred eeeEEEecCCCCCcEEEEEeCC-C--CeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCCCcEEEEeCCCCCe
Q 024372 19 VVDLFYSPITPDGFFLVSASKD-S--SPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDE 95 (268)
Q Consensus 19 v~~~~f~~~~~dg~~l~s~s~d-~--~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~ 95 (268)
+.+++|+ |||++|+..... + .+.+|+..+++......++......+.|+|++++|+..+.++.+++|++.+++.
T Consensus 38 ~~~~~~S---pdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~ 114 (396)
T 3c5m_A 38 FYQKCFT---QDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEE 114 (396)
T ss_dssp TTSCCBC---TTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCE
T ss_pred eecCcCC---CCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCc
Confidence 6777787 599998877553 3 566779888876544333332233367999999999999999999999988876
Q ss_pred eeeec-cCCeEEE-------------------EEECCCCCEEEEe-----eCCCeEEEEECCCCCCCCeEecCCcccEEE
Q 024372 96 KHSFE-HKHIVRA-------------------CAFSEDTHLLLTG-----GFEKILRIFDLNRPDAPPREVGNSSGSIRT 150 (268)
Q Consensus 96 ~~~~~-~~~~v~~-------------------v~~~~~~~~l~s~-----~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~ 150 (268)
..... +...... +.++|+++.++.+ ..+..|.+||+.+++. .....+...+..
T Consensus 115 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~--~~~~~~~~~~~~ 192 (396)
T 3c5m_A 115 QVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGEL--EVIHQDTAWLGH 192 (396)
T ss_dssp EEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCE--EEEEEESSCEEE
T ss_pred EEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcE--EeeccCCccccc
Confidence 55544 2222222 3467777766544 3567899999876542 222234456788
Q ss_pred EEEeC-CCCcEEEEeeCC-----CeEEEEeCCCCceEEeecCC--CCEEEEEECCCCcEEEE-eC---C--CeEEEEeCC
Q 024372 151 VAWLH-SDQTILSSCTDS-----GGVRLWDARSGKIVQTLETK--SPVTSAEVSRDGRYITT-AD---G--SSVKFWDAN 216 (268)
Q Consensus 151 ~~~~~-~~~~~~~~~~~d-----~~i~iwd~~~~~~~~~~~~~--~~v~~~~~s~~g~~l~~-~~---~--~~v~~wd~~ 216 (268)
+.|+| ++..++...... ..|.+||+..++........ ..+..+.|+|+|++|+. +. . +.|.+||+.
T Consensus 193 ~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~ 272 (396)
T 3c5m_A 193 PIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPE 272 (396)
T ss_dssp EEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTT
T ss_pred ceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECC
Confidence 99999 555454443221 36889998776544433322 24778899999986543 32 1 349999998
Q ss_pred CceeeeEEeCCCCceeeEEcCCCCCEEEecc----------------CCCeEEEEECCCCcE
Q 024372 217 HFGLVKGYNMPCNTESASLEPKLGNIFIAGG----------------EDMWVHVFDFHTGEQ 262 (268)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs----------------~d~~i~~wd~~~g~~ 262 (268)
+.+.......+. . ...+++++|++++.++ .+..|++||+.+++.
T Consensus 273 ~g~~~~l~~~~~-~-~~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~ 332 (396)
T 3c5m_A 273 TLENEEVMVMPP-C-SHLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA 332 (396)
T ss_dssp TCCEEEEEECCS-E-EEEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBC
T ss_pred CCCeEEeeeCCC-C-CCCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCce
Confidence 765443333332 2 2566663688877654 347899999987764
No 171
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.76 E-value=1.3e-15 Score=140.33 Aligned_cols=241 Identities=9% Similarity=-0.041 Sum_probs=162.6
Q ss_pred cCCCeeeEEEecCCCCCcEEEEEeCCC-----CeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCCCc-----
Q 024372 15 HSRPVVDLFYSPITPDGFFLVSASKDS-----SPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFT----- 84 (268)
Q Consensus 15 h~~~v~~~~f~~~~~dg~~l~s~s~d~-----~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~----- 84 (268)
|+..+.+++|+ |||++||.++.++ +|++||+.+++.+.....+ ..+..++|+||++.|+.++.++.
T Consensus 123 ~~~~~~~~~~S---PDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~ 198 (710)
T 2xdw_A 123 GTVALRGYAFS---EDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSD 198 (710)
T ss_dssp SCEEEEEEEEC---TTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCS
T ss_pred CCEEEEEEEEC---CCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCcccccc
Confidence 44457788888 4999999776644 8999999999876533222 23667899999999988887766
Q ss_pred -----------EEEEeCCCCCee--eeec---cCCeEEEEEECCCCCEEEEeeC-----CCeEEEEECCC------CCCC
Q 024372 85 -----------AKLWDALTGDEK--HSFE---HKHIVRACAFSEDTHLLLTGGF-----EKILRIFDLNR------PDAP 137 (268)
Q Consensus 85 -----------v~iw~~~~~~~~--~~~~---~~~~v~~v~~~~~~~~l~s~~~-----d~~i~~~d~~~------~~~~ 137 (268)
|++|++.+++.. ..+. +...+..+.|+||++.|+.++. +..+.+||+.+ +...
T Consensus 199 ~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~ 278 (710)
T 2xdw_A 199 GTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILK 278 (710)
T ss_dssp SSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCC
T ss_pred ccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccc
Confidence 999999887632 2222 3445778999999998887664 67899999875 3323
Q ss_pred CeEecCCcccEEEEEEeCCCCcEEEEeeCC---CeEEEEeCCCCc--eEEe-ecCCC--CEEEEEECCCCcEEEEe-CCC
Q 024372 138 PREVGNSSGSIRTVAWLHSDQTILSSCTDS---GGVRLWDARSGK--IVQT-LETKS--PVTSAEVSRDGRYITTA-DGS 208 (268)
Q Consensus 138 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d---~~i~iwd~~~~~--~~~~-~~~~~--~v~~~~~s~~g~~l~~~-~~~ 208 (268)
...+..+...+.. .|++++..++..+..+ ..|.+||+.+++ ..+. +.+.. .+..+.+++++.++++. .++
T Consensus 279 ~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g 357 (710)
T 2xdw_A 279 WVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDV 357 (710)
T ss_dssp CEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETT
T ss_pred eEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECC
Confidence 3444444444444 4677787776665443 369999998764 2233 33333 47788998777776654 455
Q ss_pred --eEEEEeCCCceeeeEEeCCCCc-eeeEEcCCCCC-EEEecc---CCCeEEEEECCCCc
Q 024372 209 --SVKFWDANHFGLVKGYNMPCNT-ESASLEPKLGN-IFIAGG---EDMWVHVFDFHTGE 261 (268)
Q Consensus 209 --~v~~wd~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~gs---~d~~i~~wd~~~g~ 261 (268)
.|.+||+.+++.++.+..+... ..+.+.+ +++ ++++.+ ..+.|++||+.+|+
T Consensus 358 ~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~-d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 358 KNTLQLHDLATGALLKIFPLEVGSVVGYSGQK-KDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEEEEEEETTTCCEEEEECCCSSEEEEEECCT-TCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred EEEEEEEECCCCCEEEecCCCCceEEEEecCC-CCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 4677888666666666655332 2344455 454 444433 35789999998887
No 172
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.75 E-value=2.4e-14 Score=119.50 Aligned_cols=240 Identities=10% Similarity=0.027 Sum_probs=164.8
Q ss_pred eeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCC----CcEEE
Q 024372 12 CHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSAD----FTAKL 87 (268)
Q Consensus 12 ~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D----~~v~i 87 (268)
+.++...+.+++|+ ++|+++++++.++.|.+||..+++....+..+...+..+++++++.++++...+ +.|.+
T Consensus 40 ~~~~~~~~~~~~~~---~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~ 116 (333)
T 2dg1_A 40 ISKKGLQLEGLNFD---RQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFA 116 (333)
T ss_dssp EESSCCCEEEEEEC---TTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEE
T ss_pred EeccCccccCcEEC---CCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEE
Confidence 44566777899997 488888888999999999999888765554567789999999999888777666 68999
Q ss_pred EeCCCCCeeeeec---cCCeEEEEEECCCCCEEEEeeC------CCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCC
Q 024372 88 WDALTGDEKHSFE---HKHIVRACAFSEDTHLLLTGGF------EKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQ 158 (268)
Q Consensus 88 w~~~~~~~~~~~~---~~~~v~~v~~~~~~~~l~s~~~------d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 158 (268)
||..++.....+. ....+..+.++|+++++++... .+.+..+|...++ .............+++++++.
T Consensus 117 ~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~i~~~~dg~ 194 (333)
T 2dg1_A 117 ATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRT--VTPIIQNISVANGIALSTDEK 194 (333)
T ss_dssp ECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCC--EEEEEEEESSEEEEEECTTSS
T ss_pred EeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCE--EEEeecCCCcccceEECCCCC
Confidence 9998776543332 3456889999999998877653 2445555544322 222212223467889998877
Q ss_pred cEEEEeeCCCeEEEEeCCC-CceEEe--------ecCCCCEEEEEECCCCcEEEEe-CCCeEEEEeCCCceeeeEEeCCC
Q 024372 159 TILSSCTDSGGVRLWDARS-GKIVQT--------LETKSPVTSAEVSRDGRYITTA-DGSSVKFWDANHFGLVKGYNMPC 228 (268)
Q Consensus 159 ~~~~~~~~d~~i~iwd~~~-~~~~~~--------~~~~~~v~~~~~s~~g~~l~~~-~~~~v~~wd~~~~~~~~~~~~~~ 228 (268)
.++++...++.|.+||+++ +..+.. +.....+..++++++|+++++. .++.|.+||.. .+.+..+..+.
T Consensus 195 ~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~ 273 (333)
T 2dg1_A 195 VLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKR-GYPIGQILIPG 273 (333)
T ss_dssp EEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECTT-SCEEEEEECTT
T ss_pred EEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECCC-CCEEEEEEcCC
Confidence 6766666668999999964 333221 1222357889999999987765 56899999984 55666676553
Q ss_pred -------CceeeEEcCCCCCEEEeccCC------CeEEEEECC
Q 024372 229 -------NTESASLEPKLGNIFIAGGED------MWVHVFDFH 258 (268)
Q Consensus 229 -------~~~~~~~~~~~~~~~~~gs~d------~~i~~wd~~ 258 (268)
.+..+++.+ +++.|+.++.+ +.|+..+..
T Consensus 274 ~~~g~~~~~~~~~~~~-dg~~L~v~~~~g~~~~~~~l~~~~~~ 315 (333)
T 2dg1_A 274 RDEGHMLRSTHPQFIP-GTNQLIICSNDIEMGGGSMLYTVNGF 315 (333)
T ss_dssp GGGTCSCBCCEEEECT-TSCEEEEEEECGGGTCCEEEEEEECS
T ss_pred CccccccCcceEEECC-CCCEEEEEeCccCCCCCceEEEEecc
Confidence 355667765 56555544333 245555543
No 173
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.75 E-value=2.9e-16 Score=133.37 Aligned_cols=243 Identities=10% Similarity=-0.018 Sum_probs=166.4
Q ss_pred eeecCCCeeeEEEecCCCCCcEEEEEe----------CCCCeEEeeCCCCCeEEEeeCc------cCcEEEEEecCCCcE
Q 024372 12 CHGHSRPVVDLFYSPITPDGFFLVSAS----------KDSSPMLRNGETGDWIGTFEGH------KGAVWSCCLDANALF 75 (268)
Q Consensus 12 ~~~h~~~v~~~~f~~~~~dg~~l~s~s----------~d~~i~iw~~~~~~~~~~~~~h------~~~V~~~~~~~~~~~ 75 (268)
+..+..+ .++|+| ||++|+.+. .+++|.+||..+++.+.++..+ ......++++|++++
T Consensus 47 i~~g~~p--~i~~sp---dg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~ 121 (361)
T 2oiz_A 47 VPTAFNG--HVQVSN---DGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKF 121 (361)
T ss_dssp EECCEEE--EEEECT---TSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSE
T ss_pred ecCCCCC--ceEECC---CCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCE
Confidence 3344445 788884 999999886 3677999999999988888632 234567899999999
Q ss_pred EEEeeC--CCcEEEEeCCCCCeeee-eccCCeEEEEEECCCC-CEEEEeeCCCeEEEEECCCCCCCC-e-----EecCCc
Q 024372 76 SASGSA--DFTAKLWDALTGDEKHS-FEHKHIVRACAFSEDT-HLLLTGGFEKILRIFDLNRPDAPP-R-----EVGNSS 145 (268)
Q Consensus 76 l~s~s~--D~~v~iw~~~~~~~~~~-~~~~~~v~~v~~~~~~-~~l~s~~~d~~i~~~d~~~~~~~~-~-----~~~~~~ 145 (268)
++.++. +++|.+||+.+++.+.. +....... +.+.|++ ..+++.+.|+.+.+|+........ . .+....
T Consensus 122 l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~-v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~ 200 (361)
T 2oiz_A 122 IVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWS-VIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKD 200 (361)
T ss_dssp EEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEE-EEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTT
T ss_pred EEEECCCCCCeEEEEECCCCcEEEEEecCCCcce-eEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCC
Confidence 887763 68999999999988877 76654422 4566754 677888889999988875322111 0 011111
Q ss_pred ccEEEEEEeCCCCcEEEEeeCCCeEEEEeCCCCce--EEeecCC-----------CCEEEEEECCCCcEEEEe-C-----
Q 024372 146 GSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKI--VQTLETK-----------SPVTSAEVSRDGRYITTA-D----- 206 (268)
Q Consensus 146 ~~v~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~--~~~~~~~-----------~~v~~~~~s~~g~~l~~~-~----- 206 (268)
.++ .+...+++..++.. +.++.|.++|+..... +..+... .....++++|+++.+... .
T Consensus 201 ~~~-~~~~~~~g~~~~~~-~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~ 278 (361)
T 2oiz_A 201 DPI-FIAPALDKDKAHFV-SYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKE 278 (361)
T ss_dssp SCB-CSCCEECSSEEEEE-BTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCT
T ss_pred Cce-EEEecccCCEEEEE-eCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCc
Confidence 111 11223444444444 4568999999975532 2222110 111237899997765432 2
Q ss_pred ------CCeEEEEeCCCceeeeEEeCCCCceeeEEcCCCCCEEEeccCCCeEEEEECCCC--cEEee
Q 024372 207 ------GSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTG--EQIAI 265 (268)
Q Consensus 207 ------~~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~d~~i~~wd~~~g--~~~~~ 265 (268)
...|.+||+.+.+.++++.... +..+.+++ +|+++++++. +.|++||.+++ +.++.
T Consensus 279 ~~~~~~~~~v~viD~~t~~~v~~i~~~~-p~~ia~sp-dg~~l~v~n~-~~v~v~D~~t~~l~~~~~ 342 (361)
T 2oiz_A 279 GTHKFPAAEIWVMDTKTKQRVARIPGRD-ALSMTIDQ-QRNLMLTLDG-GNVNVYDISQPEPKLLRT 342 (361)
T ss_dssp TCTTCCCSEEEEEETTTTEEEEEEECTT-CCEEEEET-TTTEEEEECS-SCEEEEECSSSSCEEEEE
T ss_pred ccccCCCceEEEEECCCCcEEEEEecCC-eeEEEECC-CCCEEEEeCC-CeEEEEECCCCcceeeEE
Confidence 2489999999999999998877 88888888 5888887776 89999999999 88765
No 174
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.75 E-value=9.9e-16 Score=128.31 Aligned_cols=237 Identities=8% Similarity=0.011 Sum_probs=168.2
Q ss_pred CeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCCCcEEEEeCCCCCeee
Q 024372 18 PVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEKH 97 (268)
Q Consensus 18 ~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~ 97 (268)
...++.+. ++++.++...++++.++|..+++.+.++.. ......+++++++...++...++.|.+||..+++...
T Consensus 45 ~~~~i~~~----~~~lyv~~~~~~~v~viD~~t~~~~~~i~~-~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~ 119 (328)
T 3dsm_A 45 VAQSMVIR----DGIGWIVVNNSHVIFAIDINTFKEVGRITG-FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITG 119 (328)
T ss_dssp CEEEEEEE----TTEEEEEEGGGTEEEEEETTTCCEEEEEEC-CSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEE
T ss_pred cceEEEEE----CCEEEEEEcCCCEEEEEECcccEEEEEcCC-CCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEE
Confidence 34567775 456666777789999999999999988863 4567889998888666666589999999999988777
Q ss_pred eeccCC------eEEEEEECCCCCEEEEee--CCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEeeCC--
Q 024372 98 SFEHKH------IVRACAFSEDTHLLLTGG--FEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDS-- 167 (268)
Q Consensus 98 ~~~~~~------~v~~v~~~~~~~~l~s~~--~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d-- 167 (268)
.+.... ....+++ .++ .++.+. .++.|.++|+.+.+.. ..+... .....+.+.+++. +++++..+
T Consensus 120 ~i~~g~~~~~~~~p~~i~~-~~~-~lyv~~~~~~~~v~viD~~t~~~~-~~i~~g-~~p~~i~~~~dG~-l~v~~~~~~~ 194 (328)
T 3dsm_A 120 YIECPDMDMESGSTEQMVQ-YGK-YVYVNCWSYQNRILKIDTETDKVV-DELTIG-IQPTSLVMDKYNK-MWTITDGGYE 194 (328)
T ss_dssp EEECTTCCTTTCBCCCEEE-ETT-EEEEEECTTCCEEEEEETTTTEEE-EEEECS-SCBCCCEECTTSE-EEEEBCCBCT
T ss_pred EEEcCCccccCCCcceEEE-ECC-EEEEEcCCCCCEEEEEECCCCeEE-EEEEcC-CCccceEEcCCCC-EEEEECCCcc
Confidence 665443 4455666 344 444444 4889999998765432 222211 2234567777665 55555443
Q ss_pred --------CeEEEEeCCCCceEEeecC--CCCEEEEEECCCCcEEEEeCCCeEEEEeCCCceeeeEE--eC-CCCceeeE
Q 024372 168 --------GGVRLWDARSGKIVQTLET--KSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGY--NM-PCNTESAS 234 (268)
Q Consensus 168 --------~~i~iwd~~~~~~~~~~~~--~~~v~~~~~s~~g~~l~~~~~~~v~~wd~~~~~~~~~~--~~-~~~~~~~~ 234 (268)
+.|.++|.++++....+.. ...+..++++|+++++..++. .|.+||..+.+..... .. ...+..++
T Consensus 195 ~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~-~v~~~d~~t~~~~~~~~~~~~~~~p~gi~ 273 (328)
T 3dsm_A 195 GSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN-DIWRMPVEADRVPVRPFLEFRDTKYYGLT 273 (328)
T ss_dssp TCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS-SEEEEETTCSSCCSSCSBCCCSSCEEEEE
T ss_pred CCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc-EEEEEECCCCceeeeeeecCCCCceEEEE
Confidence 7899999999988777654 235789999999988766654 8999999876543211 11 13456677
Q ss_pred EcCCCCCEEEec----cCCCeEEEEECCCCcEEeec
Q 024372 235 LEPKLGNIFIAG----GEDMWVHVFDFHTGEQIAIT 266 (268)
Q Consensus 235 ~~~~~~~~~~~g----s~d~~i~~wd~~~g~~~~~~ 266 (268)
+.|..+.++++. ..++.|++||.. |+.+..+
T Consensus 274 vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i 308 (328)
T 3dsm_A 274 VNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEF 308 (328)
T ss_dssp ECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEE
T ss_pred EcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEE
Confidence 777678888887 778999999987 8887653
No 175
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.75 E-value=1.2e-15 Score=129.48 Aligned_cols=229 Identities=12% Similarity=0.133 Sum_probs=147.7
Q ss_pred EEEEEeCC--CCeEEe--eCCCCCeE--EEee-CccCcEEEEEecCCCcEEEEeeCCCcEEEEeCC-CCCeeeeeccC--
Q 024372 33 FLVSASKD--SSPMLR--NGETGDWI--GTFE-GHKGAVWSCCLDANALFSASGSADFTAKLWDAL-TGDEKHSFEHK-- 102 (268)
Q Consensus 33 ~l~s~s~d--~~i~iw--~~~~~~~~--~~~~-~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw~~~-~~~~~~~~~~~-- 102 (268)
+|+.|+.. +.|.+| |..+|++. .... ++...+..++|+|+++++++++.+ .+.+|++. +++......+.
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~ 82 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIG 82 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECC
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecC
Confidence 34555543 446655 45566543 2221 233467789999999999888888 99999987 66654433321
Q ss_pred CeEEEEEECCCCCE--EEEee-------------CCCeEEEEECCCCCCCCeEec----CCcccEEEEEEeCCCCcEEEE
Q 024372 103 HIVRACAFSEDTHL--LLTGG-------------FEKILRIFDLNRPDAPPREVG----NSSGSIRTVAWLHSDQTILSS 163 (268)
Q Consensus 103 ~~v~~v~~~~~~~~--l~s~~-------------~d~~i~~~d~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~~~~ 163 (268)
.....++|+|+++. ++++. .++.+.+|++........... .+...+..++|+|++..++++
T Consensus 83 g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~ 162 (365)
T 1jof_A 83 GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSA 162 (365)
T ss_dssp SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEE
T ss_pred CCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEE
Confidence 22445789999984 55553 689999999863222212221 234568899999998877666
Q ss_pred eeCCCeEEEEeCC-CCceE--Eeec---CCCCEEEEEECCCCcEEEE-e-CCCeEEEEeCC--Cceee---eEEe-CCC-
Q 024372 164 CTDSGGVRLWDAR-SGKIV--QTLE---TKSPVTSAEVSRDGRYITT-A-DGSSVKFWDAN--HFGLV---KGYN-MPC- 228 (268)
Q Consensus 164 ~~~d~~i~iwd~~-~~~~~--~~~~---~~~~v~~~~~s~~g~~l~~-~-~~~~v~~wd~~--~~~~~---~~~~-~~~- 228 (268)
...++.|++||+. +++.. ..+. +...+..++|+|+|+++.. . .++.|.+|++. +++.. ..+. .+.
T Consensus 163 ~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~ 242 (365)
T 1jof_A 163 DLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPG 242 (365)
T ss_dssp ETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTT
T ss_pred cCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCC
Confidence 5556899999998 77643 3343 2345889999999988754 3 36799999764 34332 2222 221
Q ss_pred ------------CceeeE-EcCCCCCEEEeccCC-C-----eEEEEECC-CCcEE
Q 024372 229 ------------NTESAS-LEPKLGNIFIAGGED-M-----WVHVFDFH-TGEQI 263 (268)
Q Consensus 229 ------------~~~~~~-~~~~~~~~~~~gs~d-~-----~i~~wd~~-~g~~~ 263 (268)
....+. ++| +|++|+++..+ . .|.+|++. +|+..
T Consensus 243 ~~g~~~~~~~~~~~~~i~~~sp-dG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~ 296 (365)
T 1jof_A 243 IPDRDPETGKGLYRADVCALTF-SGKYMFASSRANKFELQGYIAGFKLRDCGSIE 296 (365)
T ss_dssp CCCBCTTTSSBSEEEEEEEECT-TSSEEEEEEEESSTTSCCEEEEEEECTTSCEE
T ss_pred cCCcccccccccccccEEEECC-CCCEEEEECCCCCCCCCCeEEEEEECCCCCEE
Confidence 234566 666 68877765432 2 89999986 67654
No 176
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.75 E-value=9.1e-16 Score=128.18 Aligned_cols=239 Identities=14% Similarity=0.063 Sum_probs=167.4
Q ss_pred CCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCCCcEEEEeCCCCCee
Q 024372 17 RPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEK 96 (268)
Q Consensus 17 ~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~ 96 (268)
..|.+++|+| ++..++..+.+++++.| .++....+..+...+..++|++++.+++++..++.|.+||..++...
T Consensus 6 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~ 79 (333)
T 2dg1_A 6 QDLPTLFYSG---KSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIK 79 (333)
T ss_dssp CCCCBCCSCG---GGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEE
T ss_pred cccceeeecC---CccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEE
Confidence 4578888986 66677777889999999 45667778778788899999999998888888999999999887765
Q ss_pred eee-ccCCeEEEEEECCCCCEEEEeeCC----CeEEEEECCCCCCCCeEec--CCcccEEEEEEeCCCCcEEEEeeC---
Q 024372 97 HSF-EHKHIVRACAFSEDTHLLLTGGFE----KILRIFDLNRPDAPPREVG--NSSGSIRTVAWLHSDQTILSSCTD--- 166 (268)
Q Consensus 97 ~~~-~~~~~v~~v~~~~~~~~l~s~~~d----~~i~~~d~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~--- 166 (268)
... .+...+..++++++++++++...+ +.|.+||....... .... .....+..+++.+++. ++++...
T Consensus 80 ~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~ 157 (333)
T 2dg1_A 80 RPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQ-DIIEDLSTAYCIDDMVFDSKGG-FYFTDFRGYS 157 (333)
T ss_dssp EEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCE-EEECSSSSCCCEEEEEECTTSC-EEEEECCCBT
T ss_pred EEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEE-EEEccCccCCcccceEECCCCC-EEEEeccccc
Confidence 544 456679999999999988877666 68999998654321 1211 2334678899888765 4444432
Q ss_pred ---CCeEEEEeCCCCceEEeecCCCCEEEEEECCCCcEE-EEe-CCCeEEEEeCCC-ceeeeEE------eCC--CCcee
Q 024372 167 ---SGGVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYI-TTA-DGSSVKFWDANH-FGLVKGY------NMP--CNTES 232 (268)
Q Consensus 167 ---d~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~g~~l-~~~-~~~~v~~wd~~~-~~~~~~~------~~~--~~~~~ 232 (268)
.+.|..+|..+++..........+..++++|+|+++ ++. .++.|.+||+.. ...+..+ ... ..+..
T Consensus 158 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~ 237 (333)
T 2dg1_A 158 TNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDS 237 (333)
T ss_dssp TBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEE
T ss_pred cCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCc
Confidence 256777777766554433333457899999999854 343 467999999853 2222211 111 12344
Q ss_pred eEEcCCCCCEEEeccCCCeEEEEECCCCcEEee
Q 024372 233 ASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIAI 265 (268)
Q Consensus 233 ~~~~~~~~~~~~~gs~d~~i~~wd~~~g~~~~~ 265 (268)
+++.+ +|.++++...++.|++||. +|+.+..
T Consensus 238 i~~d~-~G~l~v~~~~~~~v~~~d~-~g~~~~~ 268 (333)
T 2dg1_A 238 CCIDS-DDNLYVAMYGQGRVLVFNK-RGYPIGQ 268 (333)
T ss_dssp EEEBT-TCCEEEEEETTTEEEEECT-TSCEEEE
T ss_pred eEECC-CCCEEEEEcCCCEEEEECC-CCCEEEE
Confidence 56666 5888888777889999998 4665544
No 177
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.74 E-value=2.7e-16 Score=133.93 Aligned_cols=234 Identities=9% Similarity=0.001 Sum_probs=155.1
Q ss_pred eEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEE-------------------EEecCCCcEEEEe--
Q 024372 21 DLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWS-------------------CCLDANALFSASG-- 79 (268)
Q Consensus 21 ~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~-------------------~~~~~~~~~l~s~-- 79 (268)
.+.|+ |||++|+.++.++.+.+|+..+++....+..+.+.... +.++|++..++..
T Consensus 85 ~~~~s---pdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~ 161 (396)
T 3c5m_A 85 GGFIS---TDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEF 161 (396)
T ss_dssp TCEEC---TTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHH
T ss_pred cceEC---CCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeee
Confidence 36777 59999999999999999999998876655555543333 3456777665433
Q ss_pred ---eCCCcEEEEeCCCCCeeeeeccCCeEEEEEECC-CCCEEEEeeCC------CeEEEEECCCCCCCCeEecCC--ccc
Q 024372 80 ---SADFTAKLWDALTGDEKHSFEHKHIVRACAFSE-DTHLLLTGGFE------KILRIFDLNRPDAPPREVGNS--SGS 147 (268)
Q Consensus 80 ---s~D~~v~iw~~~~~~~~~~~~~~~~v~~v~~~~-~~~~l~s~~~d------~~i~~~d~~~~~~~~~~~~~~--~~~ 147 (268)
..+..|++||+.+++......+...+..+.|+| +++.++..+.+ ..|.+||+..+. ......+ ...
T Consensus 162 ~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~--~~~l~~~~~~~~ 239 (396)
T 3c5m_A 162 YHTNPTCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSN--VRKIKEHAEGES 239 (396)
T ss_dssp HHTCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCC--CEESSCCCTTEE
T ss_pred ccCCCcceEEEEECCCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCc--eeEeeccCCCcc
Confidence 456789999999888766666777788999999 78767665543 357788875432 2222222 235
Q ss_pred EEEEEEeCCCCcEEEEeeCC----CeEEEEeCCCCceEEeecCCCCEEEEEECC-CCcEEEEe-----------------
Q 024372 148 IRTVAWLHSDQTILSSCTDS----GGVRLWDARSGKIVQTLETKSPVTSAEVSR-DGRYITTA----------------- 205 (268)
Q Consensus 148 v~~~~~~~~~~~~~~~~~~d----~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~~----------------- 205 (268)
+..+.|+|++..++.++.++ +.|++||+.+++........ ... +.|+| +|++++.+
T Consensus 240 ~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~-~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~ 317 (396)
T 3c5m_A 240 CTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMP-PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIE 317 (396)
T ss_dssp EEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECC-SEE-EEEECSSSSEEEEEECCC----------CCC
T ss_pred ccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCC-CCC-CCccCCCCceEEEecCCcceeeccccccccC
Confidence 77789999988776654432 34999999988765433222 233 88999 99987653
Q ss_pred CCCeEEEEeCCCceeeeEEeCCC-----------CceeeEEcCCCCCEEEeccC-CC--eEEEEECCCCcE
Q 024372 206 DGSSVKFWDANHFGLVKGYNMPC-----------NTESASLEPKLGNIFIAGGE-DM--WVHVFDFHTGEQ 262 (268)
Q Consensus 206 ~~~~v~~wd~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~gs~-d~--~i~~wd~~~g~~ 262 (268)
.+..|.+||+............. ......+++ +|+.|+.++. ++ .|+++|+.++++
T Consensus 318 ~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~s~~~~~~~l~~~~~~~~~~ 387 (396)
T 3c5m_A 318 NDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTP-NDDGVLFTSDFEGVPAIYIADVPESYK 387 (396)
T ss_dssp CCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECT-TSSEEEEEECTTSSCEEEEEECCTTCC
T ss_pred CCCcEEEEecccCceEEccCCCCccccccccccCCCCCceEcc-CCCeEEEEecCCCCceEEEEEEccccc
Confidence 23689999997765433222222 133456676 5877776543 44 466666665554
No 178
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.72 E-value=5.4e-16 Score=143.46 Aligned_cols=246 Identities=10% Similarity=0.003 Sum_probs=155.0
Q ss_pred EeeecCCCe-----eeEEEecCCCCCcEEEEEeCCCC---------eEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEE
Q 024372 11 VCHGHSRPV-----VDLFYSPITPDGFFLVSASKDSS---------PMLRNGETGDWIGTFEGHKGAVWSCCLDANALFS 76 (268)
Q Consensus 11 ~~~~h~~~v-----~~~~f~~~~~dg~~l~s~s~d~~---------i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l 76 (268)
++.+|.... .+++|+ |||++|+.++.+++ +.+||+.++++. .+..|.+.+...+|+|||+.|
T Consensus 51 ~~~~~~~~~~~~~~~~~~~S---pdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~l 126 (740)
T 4a5s_A 51 FLENSTFDEFGHSINDYSIS---PDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKL 126 (740)
T ss_dssp EECTTTTTTCCSCCCEEEEC---TTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCE
T ss_pred EEechhhhhhcccccceEEC---CCCCEEEEEECCeeeEEEccceEEEEEECCCCcEE-EcccCCCcceeeEECCCCCEE
Confidence 345565432 236666 59999999998754 459999999765 477788899999999999999
Q ss_pred EEeeCCCcEEEEeCCCCCeeeeec--cCCeE-----------------EEEEECCCCCEEEEeeCCC-------------
Q 024372 77 ASGSADFTAKLWDALTGDEKHSFE--HKHIV-----------------RACAFSEDTHLLLTGGFEK------------- 124 (268)
Q Consensus 77 ~s~s~D~~v~iw~~~~~~~~~~~~--~~~~v-----------------~~v~~~~~~~~l~s~~~d~------------- 124 (268)
|.++ |+.|++|++.++...+... +...+ ..+.|||||+.|+.++.|.
T Consensus 127 a~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~ 205 (740)
T 4a5s_A 127 AYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSD 205 (740)
T ss_dssp EEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCS
T ss_pred EEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecC
Confidence 8874 7899999998877544221 11112 3488999999999875332
Q ss_pred -----------------------eEEEEECCC---CCC-CCeEec------CCcccEEEEEEeCCCCcEEEEeeC---CC
Q 024372 125 -----------------------ILRIFDLNR---PDA-PPREVG------NSSGSIRTVAWLHSDQTILSSCTD---SG 168 (268)
Q Consensus 125 -----------------------~i~~~d~~~---~~~-~~~~~~------~~~~~v~~~~~~~~~~~~~~~~~~---d~ 168 (268)
.+++||+.+ ++. ...... .+...+..++|+|++..++..... +.
T Consensus 206 ~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~ 285 (740)
T 4a5s_A 206 ESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYS 285 (740)
T ss_dssp TTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEE
T ss_pred CCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEE
Confidence 477888876 421 122222 256678899999988754444322 23
Q ss_pred eEEEEeCCCCc----eEEe--e--c-CCCCE-----EEEEECCCCcEEE--EeC-C--CeEEEEeCCCceeeeEEeCCCC
Q 024372 169 GVRLWDARSGK----IVQT--L--E-TKSPV-----TSAEVSRDGRYIT--TAD-G--SSVKFWDANHFGLVKGYNMPCN 229 (268)
Q Consensus 169 ~i~iwd~~~~~----~~~~--~--~-~~~~v-----~~~~~s~~g~~l~--~~~-~--~~v~~wd~~~~~~~~~~~~~~~ 229 (268)
.|++||+.+++ +... + + +...+ ....|+|||+.++ .++ + ..|.+||+........-...-.
T Consensus 286 ~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT~g~~~ 365 (740)
T 4a5s_A 286 VMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFITKGTWE 365 (740)
T ss_dssp EEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEESCCSSSC
T ss_pred EEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEecccCCEE
Confidence 79999999887 3221 1 2 22222 3678999998654 332 3 4688899876543332222222
Q ss_pred ceeeEEcCCCCCEEEeccC--C----CeEEEEECCCCcE
Q 024372 230 TESASLEPKLGNIFIAGGE--D----MWVHVFDFHTGEQ 262 (268)
Q Consensus 230 ~~~~~~~~~~~~~~~~gs~--d----~~i~~wd~~~g~~ 262 (268)
.... ..++.+.++.+++. + ..|+..++..++.
T Consensus 366 v~~~-~~~d~~~i~f~~~~~~~~~~~~~ly~v~~~g~~~ 403 (740)
T 4a5s_A 366 VIGI-EALTSDYLYYISNEYKGMPGGRNLYKIQLIDYTK 403 (740)
T ss_dssp EEEE-EEECSSEEEEEESCGGGCTTCBEEEEEETTEEEE
T ss_pred EEEE-EEEeCCEEEEEEecCCCCCceeEEEEEECCCCCc
Confidence 2222 22333444445554 2 3565556554443
No 179
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.71 E-value=1e-14 Score=119.21 Aligned_cols=195 Identities=12% Similarity=0.214 Sum_probs=143.6
Q ss_pred cCCCeeeEEEecCCCCCcEEEEEeC-CCCeEEeeCCCCCeEEEeeC-ccCcEEEEEecCCCcEEEEeeCCCcEEEEeCCC
Q 024372 15 HSRPVVDLFYSPITPDGFFLVSASK-DSSPMLRNGETGDWIGTFEG-HKGAVWSCCLDANALFSASGSADFTAKLWDALT 92 (268)
Q Consensus 15 h~~~v~~~~f~~~~~dg~~l~s~s~-d~~i~iw~~~~~~~~~~~~~-h~~~V~~~~~~~~~~~l~s~s~D~~v~iw~~~~ 92 (268)
|...+.++++.+ ++|.++++... ++.|.+|+ .+++.+..+.. +...+..+++++++.++++...++.|++|+..
T Consensus 75 ~~~~p~~i~~~~--~~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~- 150 (286)
T 1q7f_A 75 QLLYPNRVAVVR--NSGDIIVTERSPTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN- 150 (286)
T ss_dssp CBSSEEEEEEET--TTTEEEEEECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-
T ss_pred cccCceEEEEEc--CCCeEEEEcCCCCCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-
Confidence 445778899853 47777766643 88999999 67887777753 44678999999999988888888999999964
Q ss_pred CCeeeeec---cCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEecCC--cccEEEEEEeCCCCcEEEEeeCC
Q 024372 93 GDEKHSFE---HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNS--SGSIRTVAWLHSDQTILSSCTDS 167 (268)
Q Consensus 93 ~~~~~~~~---~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~d 167 (268)
+.....+. +...+..++++++++++++...++.|++||... . ....+... ......+++.+++ .++++...+
T Consensus 151 g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g-~-~~~~~~~~g~~~~p~~i~~d~~G-~l~v~~~~~ 227 (286)
T 1q7f_A 151 GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEG-Q-YLRQIGGEGITNYPIGVGINSNG-EILIADNHN 227 (286)
T ss_dssp SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTC-C-EEEEESCTTTSCSEEEEEECTTC-CEEEEECSS
T ss_pred CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCC-C-EEEEEccCCccCCCcEEEECCCC-CEEEEeCCC
Confidence 45555553 334578999999999888888899999999743 2 22233222 2457788988876 566666655
Q ss_pred C-eEEEEeCCCCceEEeecCC---CCEEEEEECCCCcEEEEeCCCeEEEEeCCC
Q 024372 168 G-GVRLWDARSGKIVQTLETK---SPVTSAEVSRDGRYITTADGSSVKFWDANH 217 (268)
Q Consensus 168 ~-~i~iwd~~~~~~~~~~~~~---~~v~~~~~s~~g~~l~~~~~~~v~~wd~~~ 217 (268)
+ .|++||. +++.+..+... ..+..++++|+|++++++.++.|++|+...
T Consensus 228 ~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 228 NFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDGSVVLASKDYRLYIYRYVQ 280 (286)
T ss_dssp SCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETTTEEEEEETTTEEEEEECSC
T ss_pred CEEEEEECC-CCCEEEEEcccCCCCcceeEEECCCCcEEEECCCCeEEEEEccc
Confidence 5 9999995 46666665432 237799999999988887789999999754
No 180
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.71 E-value=9.8e-15 Score=119.36 Aligned_cols=228 Identities=12% Similarity=0.089 Sum_probs=163.9
Q ss_pred CCcEEEEEeCCCCeEEeeCCCCCeEEEeeCcc-CcEEEEEecCCCcEEEEeeCCCcEEEEeCCCCCeeeeeccC--CeEE
Q 024372 30 DGFFLVSASKDSSPMLRNGETGDWIGTFEGHK-GAVWSCCLDANALFSASGSADFTAKLWDALTGDEKHSFEHK--HIVR 106 (268)
Q Consensus 30 dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~-~~V~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~--~~v~ 106 (268)
.+++|++++.|+.|.+||.++|+.+-++..+. ..+..+.+.|++.+++ +.++.|+.||. +++.+..+... ..+.
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~ 80 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQ 80 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCcccc
Confidence 36799999999999999999999999998776 4788899999999988 35788999999 78888887643 4788
Q ss_pred EEEECCCCCEEEEeeC-CCeEEEEECCCCCCCCeEec-----CCcccEEEEEEeCCCCcEEEEeeCCCeEEEEeCCCCce
Q 024372 107 ACAFSEDTHLLLTGGF-EKILRIFDLNRPDAPPREVG-----NSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKI 180 (268)
Q Consensus 107 ~v~~~~~~~~l~s~~~-d~~i~~~d~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~ 180 (268)
++.+.++++++++.+. ++.+..+|. .++....... .+......+...+++. ++++...++.|..||.. |+.
T Consensus 81 ~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~-~lv~~~~~~~v~~~d~~-G~~ 157 (276)
T 3no2_A 81 TARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGN-YLVPLFATSEVREIAPN-GQL 157 (276)
T ss_dssp EEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSC-EEEEETTTTEEEEECTT-SCE
T ss_pred ccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCC-EEEEecCCCEEEEECCC-CCE
Confidence 8999999999998876 666766765 3332111110 1111233345566554 56666778999999998 999
Q ss_pred EEeecCCCCEEEEEECCCCcEEEEe-CCCeEEEEeCCCceeeeEEeCCC-C------ceeeEEcCCCCCEEEeccCC---
Q 024372 181 VQTLETKSPVTSAEVSRDGRYITTA-DGSSVKFWDANHFGLVKGYNMPC-N------TESASLEPKLGNIFIAGGED--- 249 (268)
Q Consensus 181 ~~~~~~~~~v~~~~~s~~g~~l~~~-~~~~v~~wd~~~~~~~~~~~~~~-~------~~~~~~~~~~~~~~~~gs~d--- 249 (268)
+.++.....+.++.+.++|++++++ .++.|..+|..+++.+..+.... . +......+ +|.++++.+..
T Consensus 158 ~w~~~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~-~G~i~v~~~~g~~~ 236 (276)
T 3no2_A 158 LNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQ-NGGLYICNWQGHDR 236 (276)
T ss_dssp EEEEECSSCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECT-TSCEEEEEECTTCT
T ss_pred EEEEECCCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcC-CCCEEEEeccCccc
Confidence 9988766566778889999988765 45689999999898888876321 1 22333344 68888876321
Q ss_pred -----CeEEEEEC-CCCcEEe
Q 024372 250 -----MWVHVFDF-HTGEQIA 264 (268)
Q Consensus 250 -----~~i~~wd~-~~g~~~~ 264 (268)
+..+++++ .+|+.+=
T Consensus 237 ~~~~~~~~~~~~~~~~g~~~W 257 (276)
T 3no2_A 237 EAGKGKHPQLVEIDSEGKVVW 257 (276)
T ss_dssp TGGGSCCCSEEEECTTSBEEE
T ss_pred cccccCCceEEEECCCCCEEE
Confidence 23455555 4566653
No 181
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.70 E-value=5.5e-15 Score=135.80 Aligned_cols=238 Identities=10% Similarity=-0.049 Sum_probs=154.0
Q ss_pred ecCCCeeeEEEecCCCCCcEEE-----EEeCCCCeEEeeCCCCCeEEEeeCccCcE--EEEEecCCCcEEEEeeCCCc--
Q 024372 14 GHSRPVVDLFYSPITPDGFFLV-----SASKDSSPMLRNGETGDWIGTFEGHKGAV--WSCCLDANALFSASGSADFT-- 84 (268)
Q Consensus 14 ~h~~~v~~~~f~~~~~dg~~l~-----s~s~d~~i~iw~~~~~~~~~~~~~h~~~V--~~~~~~~~~~~l~s~s~D~~-- 84 (268)
+|+..+.+++|+ |||++|| .|+.+.+|++||+.+|+.+. ..+...+ ..++|+||++.|+.++.|..
T Consensus 118 ~~~~~~~~~~~S---PDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~ 192 (695)
T 2bkl_A 118 DGTVSLGTWAVS---WDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPS 192 (695)
T ss_dssp SSCEEEEEEEEC---TTSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTT
T ss_pred CCCEEEEEEEEC---CCCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCC
Confidence 455568888998 4999999 55666789999999998651 1122222 57889999999999888776
Q ss_pred -----------EEEEeCCCCCe--eeeec---cCCeEEEEEECCCCCEEEEeeCCC----eEEEEECCCCCCCCeEecCC
Q 024372 85 -----------AKLWDALTGDE--KHSFE---HKHIVRACAFSEDTHLLLTGGFEK----ILRIFDLNRPDAPPREVGNS 144 (268)
Q Consensus 85 -----------v~iw~~~~~~~--~~~~~---~~~~v~~v~~~~~~~~l~s~~~d~----~i~~~d~~~~~~~~~~~~~~ 144 (268)
|++|++.++.. ...+. +...+..+.|+|+|+.|+.++.++ .+.+++...+ ....+..+
T Consensus 193 ~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~--~~~~l~~~ 270 (695)
T 2bkl_A 193 IKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEK--DFRLLVKG 270 (695)
T ss_dssp SCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCS--SCEEEEEC
T ss_pred CccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCC--ceEEeecC
Confidence 99999988763 22222 335688899999999888877665 5666665433 23333333
Q ss_pred cccEEEEEEeCCCCcEEEEee---CCCeEEEEeCCCCce---EEeecC--CCCEEEEEECCCCcEEEE-eCCCeEEEEeC
Q 024372 145 SGSIRTVAWLHSDQTILSSCT---DSGGVRLWDARSGKI---VQTLET--KSPVTSAEVSRDGRYITT-ADGSSVKFWDA 215 (268)
Q Consensus 145 ~~~v~~~~~~~~~~~~~~~~~---~d~~i~iwd~~~~~~---~~~~~~--~~~v~~~~~s~~g~~l~~-~~~~~v~~wd~ 215 (268)
...+....+ +++. +++.+. .++.|.+||+.+++. ...+.+ ...+..++++ ++.++++ ..++..++|.+
T Consensus 271 ~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~ 347 (695)
T 2bkl_A 271 VGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVA 347 (695)
T ss_dssp SSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEE
T ss_pred CCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEE
Confidence 344455555 5566 555544 247899999987753 333333 2347778888 5555554 46777777654
Q ss_pred C-CceeeeEEeCCC-C-ceeeEEcCCCCCEEE-e---ccCCCeEEEEECCCCcE
Q 024372 216 N-HFGLVKGYNMPC-N-TESASLEPKLGNIFI-A---GGEDMWVHVFDFHTGEQ 262 (268)
Q Consensus 216 ~-~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~-~---gs~d~~i~~wd~~~g~~ 262 (268)
. .++.++.+..+. . ...+.+.+ +++.++ + ....+.|++||+.+|+.
T Consensus 348 ~~~g~~~~~l~~~~~~~v~~~~~s~-d~~~l~~~~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 348 TLKGKPVRTVQLPGVGAASNLMGLE-DLDDAYYVFTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp ETTCCEEEECCCSSSSEECCCBSCT-TCSEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred eCCCCeeEEecCCCCeEEEEeecCC-CCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 3 234444444432 2 22334455 465555 3 33467899999988874
No 182
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.70 E-value=3.4e-14 Score=114.92 Aligned_cols=238 Identities=10% Similarity=-0.078 Sum_probs=159.4
Q ss_pred CeeeEEEecCCCCCcEEE-EEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCCCcEEEEeCCCCCee
Q 024372 18 PVVDLFYSPITPDGFFLV-SASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEK 96 (268)
Q Consensus 18 ~v~~~~f~~~~~dg~~l~-s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~ 96 (268)
...+++++| +|++.+ +.+.++.|.+|+..++........+...+..+++++++.++++.. ++.|.+||.......
T Consensus 25 ~p~~i~~~~---~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~ 100 (270)
T 1rwi_B 25 SPSGVAVDS---AGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQT 100 (270)
T ss_dssp CEEEEEECT---TCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCE
T ss_pred CccceEECC---CCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEe
Confidence 566888874 788777 557888999998766543322223345677899999988777666 889999998765443
Q ss_pred eee-ccCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEeeCCCeEEEEeC
Q 024372 97 HSF-EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDA 175 (268)
Q Consensus 97 ~~~-~~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~iwd~ 175 (268)
... .....+..+.++++++++++...++.|..|+....... ............+++.+++. ++++...++.|.+||.
T Consensus 101 ~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~-~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~ 178 (270)
T 1rwi_B 101 VLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQT-VLPFTGLNDPDGVAVDNSGN-VYVTDTDNNRVVKLEA 178 (270)
T ss_dssp ECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCE-ECCCCSCCSCCCEEECTTCC-EEEEEGGGTEEEEECT
T ss_pred eeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeE-eeccccCCCceeEEEeCCCC-EEEEECCCCEEEEEec
Confidence 222 12246788999999998887777889999976432211 11111122456788887665 6666555689999999
Q ss_pred CCCceEEeecC-CCCEEEEEECCCCcEEEEe-CCCeEEEEeCCCceeeeEEeCC-CCceeeEEcCCCCCEEEeccCCCeE
Q 024372 176 RSGKIVQTLET-KSPVTSAEVSRDGRYITTA-DGSSVKFWDANHFGLVKGYNMP-CNTESASLEPKLGNIFIAGGEDMWV 252 (268)
Q Consensus 176 ~~~~~~~~~~~-~~~v~~~~~s~~g~~l~~~-~~~~v~~wd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~gs~d~~i 252 (268)
........... ...+..++++++|.++++. .++.|..||............. ..+..+++.+ +|+++++.+.++.|
T Consensus 179 ~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~-~g~l~v~~~~~~~v 257 (270)
T 1rwi_B 179 ESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDS-DRTVYVADRGNDRV 257 (270)
T ss_dssp TTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECT-TCCEEEEEGGGTEE
T ss_pred CCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECC-CCCEEEEECCCCEE
Confidence 87765543322 2568899999999877765 4678999998654322211111 2345666666 58888898999999
Q ss_pred EEEECCCCcE
Q 024372 253 HVFDFHTGEQ 262 (268)
Q Consensus 253 ~~wd~~~g~~ 262 (268)
++|+....+.
T Consensus 258 ~~~~~~~~~~ 267 (270)
T 1rwi_B 258 VKLTSLEHHH 267 (270)
T ss_dssp EEECCCGGGS
T ss_pred EEEcCCCccc
Confidence 9999876554
No 183
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.68 E-value=2.8e-13 Score=121.26 Aligned_cols=228 Identities=14% Similarity=0.139 Sum_probs=168.9
Q ss_pred CCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCCCcEEEEeCC--CCCeeeeeccCCeEEE
Q 024372 30 DGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDAL--TGDEKHSFEHKHIVRA 107 (268)
Q Consensus 30 dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw~~~--~~~~~~~~~~~~~v~~ 107 (268)
++.++++...++++.++|..+++.+.++... ..+..+.|+||+++++.++.|+.|.+||+. +.+.+..+........
T Consensus 166 ~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g-~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P~~ 244 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARS 244 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTCCEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEE
T ss_pred CceEEEEeCCCCeEEEEECCCCeEEEEEeCC-CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCCCce
Confidence 5567778888999999999999999988743 356689999999999989999999999995 7777777776666788
Q ss_pred EEEC----CCCCEEEEee-CCCeEEEEECCCCCCCCeEecC-----------CcccEEEEEEeCCCCcEEEEeeCCCeEE
Q 024372 108 CAFS----EDTHLLLTGG-FEKILRIFDLNRPDAPPREVGN-----------SSGSIRTVAWLHSDQTILSSCTDSGGVR 171 (268)
Q Consensus 108 v~~~----~~~~~l~s~~-~d~~i~~~d~~~~~~~~~~~~~-----------~~~~v~~~~~~~~~~~~~~~~~~d~~i~ 171 (268)
+.|+ |+++++++++ .++.+.++|..+.+.. ..+.. ....+..+..+++++.+++...+.|.|.
T Consensus 245 ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~-~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~ 323 (567)
T 1qks_A 245 IETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPK-KIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKIL 323 (567)
T ss_dssp EEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEE-EEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEE
T ss_pred eEEccccCCCCCEEEEEEccCCeEEEEECCCCcEE-EEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEE
Confidence 9999 6999888776 4599999997654322 22211 1124566777787777777777779999
Q ss_pred EEeCCCCceE--EeecCCCCEEEEEECCCCcEEEEe--CCCeEEEEeCCCceeeeEEeC-CCCc---eeeEE-cCCCCCE
Q 024372 172 LWDARSGKIV--QTLETKSPVTSAEVSRDGRYITTA--DGSSVKFWDANHFGLVKGYNM-PCNT---ESASL-EPKLGNI 242 (268)
Q Consensus 172 iwd~~~~~~~--~~~~~~~~v~~~~~s~~g~~l~~~--~~~~v~~wd~~~~~~~~~~~~-~~~~---~~~~~-~~~~~~~ 242 (268)
++|....+.+ ..+........+.|+|+|+++..+ .++.|.++|+.+++.+..... ...+ ....+ .|+.+..
T Consensus 324 ~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v 403 (567)
T 1qks_A 324 LVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPV 403 (567)
T ss_dssp EEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEE
T ss_pred EEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcE
Confidence 9999876543 334444457789999999987543 467999999999988777765 2221 22233 4534566
Q ss_pred EEecc-CCCeEEEEECCC
Q 024372 243 FIAGG-EDMWVHVFDFHT 259 (268)
Q Consensus 243 ~~~gs-~d~~i~~wd~~~ 259 (268)
++++. .++.|.++|..+
T Consensus 404 ~~t~~~g~~~Vsvid~~~ 421 (567)
T 1qks_A 404 WATSHMGDDSVALIGTDP 421 (567)
T ss_dssp EEEEBSSSSEEEEEECCT
T ss_pred EEeCCCCCCeEEEecCCC
Confidence 66654 468899999877
No 184
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.68 E-value=2e-14 Score=120.50 Aligned_cols=224 Identities=12% Similarity=0.053 Sum_probs=142.6
Q ss_pred CeeeEEEecCCCCCcEEEEEeCCC---C--eEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCC----------
Q 024372 18 PVVDLFYSPITPDGFFLVSASKDS---S--PMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSAD---------- 82 (268)
Q Consensus 18 ~v~~~~f~~~~~dg~~l~s~s~d~---~--i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D---------- 82 (268)
.+..+.|+ |||++||.++.+. . +.+|+..+++.......+ . +..++|+|+++.|+.++.+
T Consensus 60 ~~~~~~~S---pDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~ 134 (347)
T 2gop_A 60 NATMPRIS---PDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFE 134 (347)
T ss_dssp SCEEEEEC---TTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC-------
T ss_pred cCCCeEEC---CCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEE
Confidence 46678887 4999999887653 3 666788888765544433 3 9999999999988877632
Q ss_pred -----------------CcEEEEeCCCCCeeeeeccCCeEEEEEECCCCCEEEEeeCCC-------eEEEEECCCCCCCC
Q 024372 83 -----------------FTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFEK-------ILRIFDLNRPDAPP 138 (268)
Q Consensus 83 -----------------~~v~iw~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~s~~~d~-------~i~~~d~~~~~~~~ 138 (268)
..|++||+.+++....+..+ .+..+.|+|++ +++++..+. ...+|.+.+++ .
T Consensus 135 ~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~--~ 210 (347)
T 2gop_A 135 DDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEKP-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGK--E 210 (347)
T ss_dssp --CCCC---------CEEEEEEEETTTTEEEEEEEEE-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTE--E
T ss_pred cccceeecCcccccCccceEEEEECCCCeEEeeecCC-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCc--e
Confidence 57889999887763333333 67788999999 887776542 34555443222 2
Q ss_pred eEecCCcccEEEEEEeCCCCcEEEEeeCC-------CeEEEEeCCCCceEEeecC-CCCEEE-EEECCCCcEEE-EeCCC
Q 024372 139 REVGNSSGSIRTVAWLHSDQTILSSCTDS-------GGVRLWDARSGKIVQTLET-KSPVTS-AEVSRDGRYIT-TADGS 208 (268)
Q Consensus 139 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~d-------~~i~iwd~~~~~~~~~~~~-~~~v~~-~~~s~~g~~l~-~~~~~ 208 (268)
..+..+ ..+..+ +|++..++..+.++ ..|.+|| +++....... ...+.. +.|+ ++ +++ ++.++
T Consensus 211 ~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~ 283 (347)
T 2gop_A 211 EKMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEG 283 (347)
T ss_dssp EEEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETT
T ss_pred EEeccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEecCC
Confidence 222222 444444 78887776655432 4788888 6665554444 345665 8899 88 554 45678
Q ss_pred eEEEEeCCCceeeeEEeCCCCceeeEEcCCCCCEEEeccCCCe-EEEEECCCCcE
Q 024372 209 SVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGGEDMW-VHVFDFHTGEQ 262 (268)
Q Consensus 209 ~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~d~~-i~~wd~~~g~~ 262 (268)
.+++| +...+.............+.+++ .++++++.+.. ..+|.+. |+.
T Consensus 284 ~~~l~-~~~g~~~~~~~~~~~v~~~~~s~---~~~~~~~~~~~~~~l~~~~-g~~ 333 (347)
T 2gop_A 284 SVNLY-IWDGEIKPIAKGRHWIMGFDVDE---IVVYLKETATRLRELFTWD-GEE 333 (347)
T ss_dssp EEEEE-EESSSEEEEECSSSEEEEEEESS---SEEEEEECSSSCCEEEEES-SSE
T ss_pred cEEEE-EcCCceEEEecCCCeEEeeeeeC---cEEEEEcCCCChHHheEeC-CcE
Confidence 99999 86544433333322334555554 67777666554 3666665 553
No 185
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.67 E-value=2.8e-13 Score=113.29 Aligned_cols=205 Identities=17% Similarity=0.150 Sum_probs=146.6
Q ss_pred cCcEEEEEecCCCcEEEEeeCC------------------------CcEEEEeCCCCCeeeeecc--CCeEEEEEECCCC
Q 024372 61 KGAVWSCCLDANALFSASGSAD------------------------FTAKLWDALTGDEKHSFEH--KHIVRACAFSEDT 114 (268)
Q Consensus 61 ~~~V~~~~~~~~~~~l~s~s~D------------------------~~v~iw~~~~~~~~~~~~~--~~~v~~v~~~~~~ 114 (268)
-+.+..+++++++.++++.+.+ ++|.+||..+++....+.. -.....+++++++
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 3678999999999988888777 4799999988887766643 2367889999999
Q ss_pred CEEEEeeCCCeEEEEECCCCCCCCeEec---------CCcccEEEEEEeCCCCcEEEEee-CCCeEEEEeCCCCceEEee
Q 024372 115 HLLLTGGFEKILRIFDLNRPDAPPREVG---------NSSGSIRTVAWLHSDQTILSSCT-DSGGVRLWDARSGKIVQTL 184 (268)
Q Consensus 115 ~~l~s~~~d~~i~~~d~~~~~~~~~~~~---------~~~~~v~~~~~~~~~~~~~~~~~-~d~~i~iwd~~~~~~~~~~ 184 (268)
+++++...++.|+.||..........+. .+......+++.|+++.++++.+ .++.|++|| ..++.+..+
T Consensus 103 ~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~ 181 (329)
T 3fvz_A 103 NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQW 181 (329)
T ss_dssp CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEE
T ss_pred CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEe
Confidence 9988888899999999754322333332 22335778999885566776765 578999999 567777766
Q ss_pred cCC-----------CCEEEEEECCC-CcEEEEe-CCCeEEEEeCCCceeeeEEeCC---CCceeeEEcCC-----CCCEE
Q 024372 185 ETK-----------SPVTSAEVSRD-GRYITTA-DGSSVKFWDANHFGLVKGYNMP---CNTESASLEPK-----LGNIF 243 (268)
Q Consensus 185 ~~~-----------~~v~~~~~s~~-g~~l~~~-~~~~v~~wd~~~~~~~~~~~~~---~~~~~~~~~~~-----~~~~~ 243 (268)
... ..+..++++|+ ++++++. .++.|++||..+++.+..+..+ .....+.+.|. ++..+
T Consensus 182 ~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~ 261 (329)
T 3fvz_A 182 GEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPY 261 (329)
T ss_dssp CEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCC
T ss_pred ccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEE
Confidence 421 23789999998 6666664 5689999999877777777533 22344444440 23333
Q ss_pred EeccCCCeEEEEECCCCcEEeec
Q 024372 244 IAGGEDMWVHVFDFHTGEQIAIT 266 (268)
Q Consensus 244 ~~gs~d~~i~~wd~~~g~~~~~~ 266 (268)
++.+.+..|++||..+|+.+..+
T Consensus 262 v~~~~~~~v~~~~~~~g~~~~~~ 284 (329)
T 3fvz_A 262 FGDQEPVQGFVMNFSSGEIIDVF 284 (329)
T ss_dssp TTCSCCCCEEEEETTTCCEEEEE
T ss_pred eccCCCcEEEEEEcCCCeEEEEE
Confidence 34445568999999999887764
No 186
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.67 E-value=2.8e-14 Score=119.46 Aligned_cols=219 Identities=13% Similarity=0.058 Sum_probs=156.8
Q ss_pred eCCCCeEEeeCCCCCeEEEee----C--ccCcEEEEEecCCCcEEEEeeCCCcEEEEeCCCCCeeeeeccCCeEEEEEEC
Q 024372 38 SKDSSPMLRNGETGDWIGTFE----G--HKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEKHSFEHKHIVRACAFS 111 (268)
Q Consensus 38 s~d~~i~iw~~~~~~~~~~~~----~--h~~~V~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~v~~v~~~ 111 (268)
+.+++|.++|..+++....+. + .......+++.. +.+.++...++.|.+||..+++.+..+........++++
T Consensus 14 ~~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~-~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~p~~i~~~ 92 (328)
T 3dsm_A 14 YSNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRD-GIGWIVVNNSHVIFAIDINTFKEVGRITGFTSPRYIHFL 92 (328)
T ss_dssp SCCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEET-TEEEEEEGGGTEEEEEETTTCCEEEEEECCSSEEEEEEE
T ss_pred CCCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEEC-CEEEEEEcCCCEEEEEECcccEEEEEcCCCCCCcEEEEe
Confidence 348899999999998776541 1 123356677753 455566667899999999999998888766678889998
Q ss_pred CCCCEEEEeeCCCeEEEEECCCCCCCCeEecCCc-----ccEEEEEEeCCCCcEEEEee-CCCeEEEEeCCCCceEEeec
Q 024372 112 EDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSS-----GSIRTVAWLHSDQTILSSCT-DSGGVRLWDARSGKIVQTLE 185 (268)
Q Consensus 112 ~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~~~-~d~~i~iwd~~~~~~~~~~~ 185 (268)
+++++.++...++.|.+||+.+.+.. ..+.... .....+++ +++.++++.. .++.|.++|+++++.+.++.
T Consensus 93 ~~g~lyv~~~~~~~v~~iD~~t~~~~-~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~ 169 (328)
T 3dsm_A 93 SDEKAYVTQIWDYRIFIINPKTYEIT-GYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELT 169 (328)
T ss_dssp ETTEEEEEEBSCSEEEEEETTTTEEE-EEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEE
T ss_pred CCCeEEEEECCCCeEEEEECCCCeEE-EEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEE
Confidence 88865555448999999998765322 2221111 02344555 3556666654 36899999999999888887
Q ss_pred CCCCEEEEEECCCCcEEEEeCC-----------CeEEEEeCCCceeeeEEeCCC--CceeeEEcCCCCCEEEeccCCCeE
Q 024372 186 TKSPVTSAEVSRDGRYITTADG-----------SSVKFWDANHFGLVKGYNMPC--NTESASLEPKLGNIFIAGGEDMWV 252 (268)
Q Consensus 186 ~~~~v~~~~~s~~g~~l~~~~~-----------~~v~~wd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~gs~d~~i 252 (268)
.......+.++|+|++++++.+ +.|.++|..+.+.++.+..+. .+..++++++ ++.++.+.. .|
T Consensus 170 ~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d-~~~lyv~~~--~v 246 (328)
T 3dsm_A 170 IGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGT-RDTLYWINN--DI 246 (328)
T ss_dssp CSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTT-SCEEEEESS--SE
T ss_pred cCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecC-CCEEEEEcc--EE
Confidence 6555678999999998776532 689999999888887777643 4677888874 555555433 79
Q ss_pred EEEECCCCcEE
Q 024372 253 HVFDFHTGEQI 263 (268)
Q Consensus 253 ~~wd~~~g~~~ 263 (268)
++||..+++..
T Consensus 247 ~~~d~~t~~~~ 257 (328)
T 3dsm_A 247 WRMPVEADRVP 257 (328)
T ss_dssp EEEETTCSSCC
T ss_pred EEEECCCCcee
Confidence 99999888753
No 187
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.66 E-value=6.6e-13 Score=109.56 Aligned_cols=237 Identities=12% Similarity=0.140 Sum_probs=161.7
Q ss_pred ecCCCeeeEEEecCCCCCcEEEE-------EeCCCCeEEeeCCCCCeEEEee----CccCcEEEEEecCC-CcEEEEeeC
Q 024372 14 GHSRPVVDLFYSPITPDGFFLVS-------ASKDSSPMLRNGETGDWIGTFE----GHKGAVWSCCLDAN-ALFSASGSA 81 (268)
Q Consensus 14 ~h~~~v~~~~f~~~~~dg~~l~s-------~s~d~~i~iw~~~~~~~~~~~~----~h~~~V~~~~~~~~-~~~l~s~s~ 81 (268)
+......+++|. ++|.++++ ++.++.|..|+..+++...... ++...+..++++++ +.++++..
T Consensus 15 ~~~~~~~~~~~~---~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~- 90 (314)
T 1pjx_A 15 EDIPGAEGPVFD---KNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM- 90 (314)
T ss_dssp CCCTTCEEEEEC---TTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET-
T ss_pred ccCCCccCceEC---CCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC-
Confidence 344556789997 48888887 6888999999988887653222 25577899999999 77655544
Q ss_pred CCcEEEEeCCCCCeeee-ecc-----CCeEEEEEECCCCCEEEEeeCC---------------CeEEEEECCCCCCCCeE
Q 024372 82 DFTAKLWDALTGDEKHS-FEH-----KHIVRACAFSEDTHLLLTGGFE---------------KILRIFDLNRPDAPPRE 140 (268)
Q Consensus 82 D~~v~iw~~~~~~~~~~-~~~-----~~~v~~v~~~~~~~~l~s~~~d---------------~~i~~~d~~~~~~~~~~ 140 (268)
...|.+||.. ++.... ... ...+..+.+++++++.++...+ +.+..||.. ++ ...
T Consensus 91 ~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~--~~~ 166 (314)
T 1pjx_A 91 RLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQ--MIQ 166 (314)
T ss_dssp TTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SC--EEE
T ss_pred CCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CC--EEE
Confidence 3478899987 655433 221 1347889999999988776654 456666654 22 122
Q ss_pred ecCCcccEEEEEEe----CCCCcEEEEeeCCCeEEEEeCC-CCc-----eEEeecCC--CCEEEEEECCCCcEEEEe-CC
Q 024372 141 VGNSSGSIRTVAWL----HSDQTILSSCTDSGGVRLWDAR-SGK-----IVQTLETK--SPVTSAEVSRDGRYITTA-DG 207 (268)
Q Consensus 141 ~~~~~~~v~~~~~~----~~~~~~~~~~~~d~~i~iwd~~-~~~-----~~~~~~~~--~~v~~~~~s~~g~~l~~~-~~ 207 (268)
..........++++ +++..++++...++.|.+||++ +++ ....+... ..+..++++++|+++++. .+
T Consensus 167 ~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~ 246 (314)
T 1pjx_A 167 VDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGS 246 (314)
T ss_dssp EEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETT
T ss_pred eccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCC
Confidence 21222345678888 8776666666667899999986 454 22333332 457889999999987765 57
Q ss_pred CeEEEEeCCCceeeeEEeCC-CCceeeEEcCCCCC-EEEeccCCCeEEEEECCC
Q 024372 208 SSVKFWDANHFGLVKGYNMP-CNTESASLEPKLGN-IFIAGGEDMWVHVFDFHT 259 (268)
Q Consensus 208 ~~v~~wd~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~gs~d~~i~~wd~~~ 259 (268)
+.|..||.++.+.+..+..+ ..+..+++.+ +++ ++++...++.|..|++..
T Consensus 247 ~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~-dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 247 SHIEVFGPDGGQPKMRIRCPFEKPSNLHFKP-QTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp TEEEEECTTCBSCSEEEECSSSCEEEEEECT-TSSEEEEEETTTTEEEEEECSS
T ss_pred CEEEEEcCCCCcEeEEEeCCCCCceeEEECC-CCCEEEEEeCCCCeEEEEeCCC
Confidence 89999999866666666665 3455666655 577 556666778899999864
No 188
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.66 E-value=7.5e-13 Score=112.74 Aligned_cols=227 Identities=12% Similarity=0.037 Sum_probs=151.7
Q ss_pred CCCcEEEEEeC--CC---CeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEee----------CCCcEEEEeCCCC
Q 024372 29 PDGFFLVSASK--DS---SPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGS----------ADFTAKLWDALTG 93 (268)
Q Consensus 29 ~dg~~l~s~s~--d~---~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s----------~D~~v~iw~~~~~ 93 (268)
++++++..+.. .. ++.++|..+++.+.++..-..+ .++++||+++++.+. .++.|.++|..+.
T Consensus 30 ~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~ 107 (373)
T 2mad_H 30 ADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTF 107 (373)
T ss_pred CCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCC
Confidence 67777777654 22 7899999999999888754444 789999999887664 3678999999988
Q ss_pred CeeeeeccC--------CeEEEEEECCCCCEEEEeeC--CCeEEEEECCCCCCCCeE-ecCCcccEEEEEEeCCCCcEEE
Q 024372 94 DEKHSFEHK--------HIVRACAFSEDTHLLLTGGF--EKILRIFDLNRPDAPPRE-VGNSSGSIRTVAWLHSDQTILS 162 (268)
Q Consensus 94 ~~~~~~~~~--------~~v~~v~~~~~~~~l~s~~~--d~~i~~~d~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~ 162 (268)
+....+... ..-..+.++|++++|+.++. ++.|.++| .+.+.. .. .... + ++.+.+.+...++
T Consensus 108 ~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~-~~~i~~~-~---~~~~~~~~~~~~~ 181 (373)
T 2mad_H 108 LPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSD-DQLLSSP-T---CYHIHPGAPSTFY 181 (373)
T ss_pred cEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEE-eEEcCCC-c---eEEEEeCCCceEE
Confidence 877766432 22447889999999998874 47899999 765432 22 2111 1 1222333333333
Q ss_pred EeeCCCeEEEEeCCCCceE--------------------------------------------------EeecC------
Q 024372 163 SCTDSGGVRLWDARSGKIV--------------------------------------------------QTLET------ 186 (268)
Q Consensus 163 ~~~~d~~i~iwd~~~~~~~--------------------------------------------------~~~~~------ 186 (268)
+...||.+.++|. +++.+ ..+..
T Consensus 182 ~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~ 260 (373)
T 2mad_H 182 LLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRK 260 (373)
T ss_pred EEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCccc
Confidence 3333444444444 33222 11110
Q ss_pred -----CCCEEEEEECCCCcEEEE-eC----------CCeEEEEeCCCceeeeEEeCCCCceeeEEcCCCCC-EEEecc-C
Q 024372 187 -----KSPVTSAEVSRDGRYITT-AD----------GSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGN-IFIAGG-E 248 (268)
Q Consensus 187 -----~~~v~~~~~s~~g~~l~~-~~----------~~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~gs-~ 248 (268)
......+.++|+++.+.. .. ++.|.+.|+.+++.++.+.....+..+.+++ +|+ +++++. .
T Consensus 261 ~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~p~~i~~s~-Dg~~~l~v~~~~ 339 (373)
T 2mad_H 261 ADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISVAQ-DGGPDLYALSAG 339 (373)
T ss_pred ccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCCCcCeEEECC-CCCeEEEEEcCC
Confidence 011233678888875543 21 2479999999999999998877788888888 576 677766 5
Q ss_pred CCeEEEEECCCCcEEee
Q 024372 249 DMWVHVFDFHTGEQIAI 265 (268)
Q Consensus 249 d~~i~~wd~~~g~~~~~ 265 (268)
++.|.+||+++++.+..
T Consensus 340 ~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 340 TEVLHIYDAGAGDQDQS 356 (373)
T ss_pred CCeEEEEECCCCCEEee
Confidence 88999999999998765
No 189
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.64 E-value=7.2e-12 Score=102.31 Aligned_cols=237 Identities=8% Similarity=-0.003 Sum_probs=165.0
Q ss_pred eecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEE-eeCccCcEEEEEecCCCcEEEEeeCCCcEEEEeCC
Q 024372 13 HGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGT-FEGHKGAVWSCCLDANALFSASGSADFTAKLWDAL 91 (268)
Q Consensus 13 ~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~-~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw~~~ 91 (268)
..+...+.++++.| +|++.++...++.+.+|+.. ++.... +..+...+..+++.+++.+.++...++.|..|+..
T Consensus 11 ~~~~~~~~~i~~d~---~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~ 86 (299)
T 2z2n_A 11 TNQDTGPYGITVSD---KGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK 86 (299)
T ss_dssp CSSSCCEEEEEECT---TSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred CCcCCCccceEECC---CCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC
Confidence 34566889999984 88888776668899999988 664432 22345678999999999988877778899999976
Q ss_pred CCCeeeeec---cCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEeeCCC
Q 024372 92 TGDEKHSFE---HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSG 168 (268)
Q Consensus 92 ~~~~~~~~~---~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~ 168 (268)
+.. ..+. ....+..+.+.+++++.++...++.+..||. ++.............+..+++.+++ .+.++...++
T Consensus 87 -g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~ 162 (299)
T 2z2n_A 87 -GII-KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDN-ALWFTENQNN 162 (299)
T ss_dssp -SCE-EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTS-CEEEEETTTT
T ss_pred -CcE-EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCC-CEEEEeCCCC
Confidence 332 2222 3346788999999998888777889999997 3322111112233457788887766 4555555568
Q ss_pred eEEEEeCCCCceEEe-ec-CCCCEEEEEECCCCcEEEEe-CCCeEEEEeCCCceeeeEEeCC---CCceeeEEcCCCCCE
Q 024372 169 GVRLWDARSGKIVQT-LE-TKSPVTSAEVSRDGRYITTA-DGSSVKFWDANHFGLVKGYNMP---CNTESASLEPKLGNI 242 (268)
Q Consensus 169 ~i~iwd~~~~~~~~~-~~-~~~~v~~~~~s~~g~~l~~~-~~~~v~~wd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 242 (268)
.|..||. +++.... +. ....+..++++++|+++++. .++.|..||. +.. +..+..+ ..+..+.+.+ +|.+
T Consensus 163 ~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~-~~~~~~~~~~~~~~~i~~~~-~g~l 238 (299)
T 2z2n_A 163 AIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGE-ITEFKIPTPNARPHAITAGA-GIDL 238 (299)
T ss_dssp EEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCC-EEEEECSSTTCCEEEEEECS-TTCE
T ss_pred EEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCc-EEEEECCCCCCCceeEEECC-CCCE
Confidence 9999999 6765443 22 23457899999999887765 4678999998 544 3334333 3345566666 5887
Q ss_pred EEeccCCCeEEEEECCCCcE
Q 024372 243 FIAGGEDMWVHVFDFHTGEQ 262 (268)
Q Consensus 243 ~~~gs~d~~i~~wd~~~g~~ 262 (268)
+++...++.|..||. +|+.
T Consensus 239 ~v~~~~~~~i~~~d~-~g~~ 257 (299)
T 2z2n_A 239 WFTEWGANKIGRLTS-NNII 257 (299)
T ss_dssp EEEETTTTEEEEEET-TTEE
T ss_pred EEeccCCceEEEECC-CCce
Confidence 777767888999997 4543
No 190
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.63 E-value=9.2e-14 Score=117.89 Aligned_cols=233 Identities=12% Similarity=0.088 Sum_probs=154.4
Q ss_pred CCCcEEEEEe------CCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEee----------CCCcEEEEeCCC
Q 024372 29 PDGFFLVSAS------KDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGS----------ADFTAKLWDALT 92 (268)
Q Consensus 29 ~dg~~l~s~s------~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s----------~D~~v~iw~~~~ 92 (268)
++++++.... .|+++.+||..+++.+.++..+..+ .++|+|++++++.++ .+++|.+||..+
T Consensus 13 ~~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t 90 (361)
T 2oiz_A 13 PQENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADK 90 (361)
T ss_dssp CGGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTT
T ss_pred CCCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcC
Confidence 4667776654 4779999999999999999877766 899999999887765 367899999998
Q ss_pred CCeeeeecc-------CCeEEEEEECCCCCEEEEeeC--CCeEEEEECCCCCCCCeE-ecCCcccEEEEEEeCCCCcEEE
Q 024372 93 GDEKHSFEH-------KHIVRACAFSEDTHLLLTGGF--EKILRIFDLNRPDAPPRE-VGNSSGSIRTVAWLHSDQTILS 162 (268)
Q Consensus 93 ~~~~~~~~~-------~~~v~~v~~~~~~~~l~s~~~--d~~i~~~d~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~ 162 (268)
.+....+.. ......+.++|++++|+++.. ++.|.+||+.+.+. ... +.. . ....+.+.|.+...++
T Consensus 91 ~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~-~~~~i~~-~-~~~~v~~~p~~~~~~~ 167 (361)
T 2oiz_A 91 LTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDY-VEDVTAA-A-GCWSVIPQPNRPRSFM 167 (361)
T ss_dssp CCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEE-EEEEGGG-T-TEEEEEECTTSSSEEE
T ss_pred CcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcE-EEEEecC-C-CcceeEEcCCCCeeEE
Confidence 888776642 234557889999999998874 58899999976532 222 221 1 2223456777656666
Q ss_pred EeeCCCeEEEEeCCC-CceEE------eecCCCCEEEEEECCCCcEE-EEeCCCeEEEEeCCCce--eeeEEeC------
Q 024372 163 SCTDSGGVRLWDARS-GKIVQ------TLETKSPVTSAEVSRDGRYI-TTADGSSVKFWDANHFG--LVKGYNM------ 226 (268)
Q Consensus 163 ~~~~d~~i~iwd~~~-~~~~~------~~~~~~~v~~~~~s~~g~~l-~~~~~~~v~~wd~~~~~--~~~~~~~------ 226 (268)
+.+.||.+.+|++.. ++... .+........+.++|++..+ ..+.++.|.++|+.... .+..+..
T Consensus 168 ~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~ 247 (361)
T 2oiz_A 168 TICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDK 247 (361)
T ss_dssp EEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHH
T ss_pred EECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCcccc
Confidence 677789999999865 55542 12221112233345666443 44567789999986432 2233322
Q ss_pred -----CCCceeeEEcCCCCCEEEecc----------CCCeEEEEECCCCcEEeec
Q 024372 227 -----PCNTESASLEPKLGNIFIAGG----------EDMWVHVFDFHTGEQIAIT 266 (268)
Q Consensus 227 -----~~~~~~~~~~~~~~~~~~~gs----------~d~~i~~wd~~~g~~~~~~ 266 (268)
+.....+.++++.++.+++.+ ....|.+||+++++.+...
T Consensus 248 ~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i 302 (361)
T 2oiz_A 248 AKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARI 302 (361)
T ss_dssp HTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEE
T ss_pred ccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEE
Confidence 112223566764445555443 1347999999999988753
No 191
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.63 E-value=6.7e-14 Score=117.32 Aligned_cols=221 Identities=16% Similarity=0.171 Sum_probs=140.8
Q ss_pred CCeeeEEEecCCCCCcEEEEEe---------CCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCC---C-
Q 024372 17 RPVVDLFYSPITPDGFFLVSAS---------KDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSAD---F- 83 (268)
Q Consensus 17 ~~v~~~~f~~~~~dg~~l~s~s---------~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D---~- 83 (268)
..+....+ ||++++... .+..+.+|+..+++.. .+ ..+..++|+|||++++..+.+ +
T Consensus 15 ~~~~~~~~-----dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-~l----~~~~~~~~SpDg~~la~~~~~~~~~~ 84 (347)
T 2gop_A 15 AYLSDPRT-----KGELVAYVLTKANLKDNKYENTIVIENLKNNARR-FI----ENATMPRISPDGKKIAFMRANEEKKV 84 (347)
T ss_dssp CEEEEEEE-----ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEE-EE----ESCEEEEECTTSSEEEEEEEETTTTE
T ss_pred EEcccceE-----CCcEEEEEEeecCcccCCccceEEEEeCCCCceE-Ec----ccCCCeEECCCCCEEEEEEeccCCCc
Confidence 34555555 677777653 2567888999888754 34 567889999999998877654 3
Q ss_pred -cEEEEeCCCCCeeeeeccCCeEEEEEECCCCCEEEEeeCC---------------------------CeEEEEECCCCC
Q 024372 84 -TAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFE---------------------------KILRIFDLNRPD 135 (268)
Q Consensus 84 -~v~iw~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~s~~~d---------------------------~~i~~~d~~~~~ 135 (268)
.|.+|++.+++......... +..+.|+|+++.|+.++.+ ..|.+||+.+++
T Consensus 85 ~~l~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~ 163 (347)
T 2gop_A 85 SEIWVADLETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEE 163 (347)
T ss_dssp EEEEEEETTTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTE
T ss_pred ceEEEEECCCCceEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCe
Confidence 37778888877666555555 8899999999988887642 568889987654
Q ss_pred CCCeEecCCcccEEEEEEeCCCCcEEEEeeCC---------CeEEEEeCCCCceEEeecCCCCEEEEEECCCCcEEEE-e
Q 024372 136 APPREVGNSSGSIRTVAWLHSDQTILSSCTDS---------GGVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYITT-A 205 (268)
Q Consensus 136 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d---------~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~-~ 205 (268)
.. ..+.. . .+..+.|+|++ ++.++..+ ..|.++| +++....... ..+..+ +|+|++++. +
T Consensus 164 ~~-~~l~~-~-~~~~~~~spdg--~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~-~~~~~~--spdg~~l~~~~ 233 (347)
T 2gop_A 164 VI-EEFEK-P-RFSSGIWHRDK--IVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMFEK-VSFYAV--DSDGERILLYG 233 (347)
T ss_dssp EE-EEEEE-E-TTCEEEEETTE--EEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEEEE-ESEEEE--EECSSCEEEEE
T ss_pred EE-eeecC-C-CcccccCCCCe--EEEEEecccccccccccccEEEeC--CCceEEeccC-cceeeE--CCCCCEEEEEE
Confidence 21 22222 2 56788999987 44444332 1455555 5554433333 444443 999987653 3
Q ss_pred CC--------CeEEEEeCCCceeeeEEeCCCC-cee-eEEcCCCCCEEEeccCCCeEEEEECCCCcEEe
Q 024372 206 DG--------SSVKFWDANHFGLVKGYNMPCN-TES-ASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIA 264 (268)
Q Consensus 206 ~~--------~~v~~wd~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~gs~d~~i~~wd~~~g~~~~ 264 (268)
.+ ..|.+|| ..+.......... ... ..+. ++ ++++++.++.+++| +.+|+...
T Consensus 234 ~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s--dg-~~~~~~~~~~~~l~-~~~g~~~~ 296 (347)
T 2gop_A 234 KPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD--GK-VYFTLFEEGSVNLY-IWDGEIKP 296 (347)
T ss_dssp CCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET--TE-EEEEEEETTEEEEE-EESSSEEE
T ss_pred ccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc--Cc-EEEEEecCCcEEEE-EcCCceEE
Confidence 22 3688888 3333222222222 222 4454 56 88889999999999 87666543
No 192
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.62 E-value=1.9e-13 Score=111.72 Aligned_cols=188 Identities=11% Similarity=0.152 Sum_probs=141.6
Q ss_pred CcEEEEeeCCCcEEEEeCCCCCeeeeeccCC--eEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEE
Q 024372 73 ALFSASGSADFTAKLWDALTGDEKHSFEHKH--IVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRT 150 (268)
Q Consensus 73 ~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~--~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~ 150 (268)
+.++++++.|+.|++||.++++.+..+.... .+.++.+.|++++++ +.++.+..||. +++...+........+..
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~ 81 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQT 81 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEE
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccccc
Confidence 5778999999999999999999988886543 678899999999988 45778999997 554333332222346778
Q ss_pred EEEeCCCCcEEEEeeCCCeEEEEeCCCCceEEeecC-------CCCEEEEEECCCCcEEEEe-CCCeEEEEeCCCceeee
Q 024372 151 VAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLET-------KSPVTSAEVSRDGRYITTA-DGSSVKFWDANHFGLVK 222 (268)
Q Consensus 151 ~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~-------~~~v~~~~~s~~g~~l~~~-~~~~v~~wd~~~~~~~~ 222 (268)
+.+.+++..+++.+.+.+.|..+|. +|+.+.++.. +.....+.+.++|+++++. .++.|..||.. ++.+.
T Consensus 82 ~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w 159 (276)
T 3no2_A 82 ARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLN 159 (276)
T ss_dssp EEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEE
T ss_pred cEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEE
Confidence 8888877665554432578888885 6887766542 1234456789999998775 57899999998 88888
Q ss_pred EEeCCCCceeeEEcCCCCCEEEeccCCCeEEEEECCCCcEEeec
Q 024372 223 GYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIAIT 266 (268)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~gs~d~~i~~wd~~~g~~~~~~ 266 (268)
.+..+..+......+ +|.++++++.++.|+.+|.++|+.+-.+
T Consensus 160 ~~~~~~~~~~~~~~~-~g~~~v~~~~~~~v~~~d~~tG~~~w~~ 202 (276)
T 3no2_A 160 SVKLSGTPFSSAFLD-NGDCLVACGDAHCFVQLNLESNRIVRRV 202 (276)
T ss_dssp EEECSSCCCEEEECT-TSCEEEECBTTSEEEEECTTTCCEEEEE
T ss_pred EEECCCCccceeEcC-CCCEEEEeCCCCeEEEEeCcCCcEEEEe
Confidence 888765555666655 6899999888889999999999987554
No 193
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.60 E-value=3.1e-13 Score=124.10 Aligned_cols=232 Identities=9% Similarity=-0.009 Sum_probs=149.1
Q ss_pred CCCcEEEEEeCCC---CeEEee--CCCCCeEEEe------eCccCcEEEEEecCCCcEEE-----EeeCCCcEEEEeCCC
Q 024372 29 PDGFFLVSASKDS---SPMLRN--GETGDWIGTF------EGHKGAVWSCCLDANALFSA-----SGSADFTAKLWDALT 92 (268)
Q Consensus 29 ~dg~~l~s~s~d~---~i~iw~--~~~~~~~~~~------~~h~~~V~~~~~~~~~~~l~-----s~s~D~~v~iw~~~~ 92 (268)
|+|.+++-...++ .-.+|- ...++...-+ .+|...+..++|+|||++|| +|+.+.+|++||+.+
T Consensus 77 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~t 156 (695)
T 2bkl_A 77 RRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDS 156 (695)
T ss_dssp EETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTT
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCC
Confidence 5888888777665 355664 3344433222 24666789999999999988 555668999999998
Q ss_pred CCee-eeeccCCeEEEEEECCCCCEEEEeeCCCe-------------EEEEECCCCCCCCeEe-c--CCcccEEEEEEeC
Q 024372 93 GDEK-HSFEHKHIVRACAFSEDTHLLLTGGFEKI-------------LRIFDLNRPDAPPREV-G--NSSGSIRTVAWLH 155 (268)
Q Consensus 93 ~~~~-~~~~~~~~v~~v~~~~~~~~l~s~~~d~~-------------i~~~d~~~~~~~~~~~-~--~~~~~v~~~~~~~ 155 (268)
++.. ...........++|+||++.|+.++.|.. |++|++.++....... . .+...+..+.|+|
T Consensus 157 g~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~Sp 236 (695)
T 2bkl_A 157 GEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSR 236 (695)
T ss_dssp CCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECT
T ss_pred CCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECC
Confidence 8765 21111111257889999999999988776 9999997654221222 1 2334678899999
Q ss_pred CCCcEEEEeeCC---CeEEEEeCCCCceEEeecCCCCEEEEEECCCCcEEEEeC----CCeEEEEeCCCcee---eeEEe
Q 024372 156 SDQTILSSCTDS---GGVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYITTAD----GSSVKFWDANHFGL---VKGYN 225 (268)
Q Consensus 156 ~~~~~~~~~~~d---~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~----~~~v~~wd~~~~~~---~~~~~ 225 (268)
++..+++++.+. ..|.+||..+++...............+ |+|.+++.++ +..|.+||+.+... .....
T Consensus 237 DG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~ 315 (695)
T 2bkl_A 237 DGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVP 315 (695)
T ss_dssp TSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEEC
T ss_pred CCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEec
Confidence 998887776553 2788887766655444444444445555 5665555443 47899999976542 22222
Q ss_pred CC-CC-ceeeEEcCCCCCEEEeccCCCeEEEEECC-CCcEE
Q 024372 226 MP-CN-TESASLEPKLGNIFIAGGEDMWVHVFDFH-TGEQI 263 (268)
Q Consensus 226 ~~-~~-~~~~~~~~~~~~~~~~gs~d~~i~~wd~~-~g~~~ 263 (268)
.. .. ...+.+. .+.++++...|+..++|.+. +|+.+
T Consensus 316 ~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~g~~~ 354 (695)
T 2bkl_A 316 EDSSASLLSVSIV--GGHLSLEYLKDATSEVRVATLKGKPV 354 (695)
T ss_dssp CCSSCEEEEEEEE--TTEEEEEEEETTEEEEEEEETTCCEE
T ss_pred CCCCCeEEEEEEE--CCEEEEEEEECCEEEEEEEeCCCCee
Confidence 22 11 2334444 47788888899988887654 35543
No 194
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.59 E-value=5.8e-13 Score=123.22 Aligned_cols=242 Identities=10% Similarity=-0.001 Sum_probs=149.0
Q ss_pred ecCCCeeeEEEecCCCCCcEEEEEeCC-----CCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCCCc----
Q 024372 14 GHSRPVVDLFYSPITPDGFFLVSASKD-----SSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFT---- 84 (268)
Q Consensus 14 ~h~~~v~~~~f~~~~~dg~~l~s~s~d-----~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~---- 84 (268)
+|+..+.+++|+ |||++||.++.+ .+|++||+.+|+.+.. ..+...+..++|+|| +.|+.++.|..
T Consensus 160 ~~~~~~~~~~~S---PDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~-~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~ 234 (741)
T 1yr2_A 160 DGATALDAWAAS---DDGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD-ELKWVKFSGLAWLGN-DALLYSRFAEPKEGQ 234 (741)
T ss_dssp ---EEEEEEEEC---TTSSEEEEEEEETTCSEEEEEEEETTTCCEEEE-EEEEEESCCCEESTT-SEEEEEECCCC----
T ss_pred CCCEEEEeEEEC---CCCCEEEEEEcCCCCceEEEEEEECCCCCCCCc-cCCCceeccEEEECC-CEEEEEEecCccccc
Confidence 344467788888 499999887655 4589999999987643 112222356789999 88887776654
Q ss_pred ----------EEEEeCCCCCe--eeeec---cCCeEEEEEECCCCCEEEEeeCC-----CeEEEEECCCCCCC-CeEecC
Q 024372 85 ----------AKLWDALTGDE--KHSFE---HKHIVRACAFSEDTHLLLTGGFE-----KILRIFDLNRPDAP-PREVGN 143 (268)
Q Consensus 85 ----------v~iw~~~~~~~--~~~~~---~~~~v~~v~~~~~~~~l~s~~~d-----~~i~~~d~~~~~~~-~~~~~~ 143 (268)
|++|++.++.. ...+. +...+..+.|+|||+.|+..+.+ ..+.+||+.++... ...+..
T Consensus 235 ~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~ 314 (741)
T 1yr2_A 235 AFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIP 314 (741)
T ss_dssp ----CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEEC
T ss_pred ccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecC
Confidence 88999987763 22332 22357889999999988877654 48999998765212 333333
Q ss_pred CcccEEEEEEeCCCCcEEEEeeC---CCeEEEEeCCCC--ceEEeecCCC-CEEEEEECCCCcEEEE-eCCCeEEEEeCC
Q 024372 144 SSGSIRTVAWLHSDQTILSSCTD---SGGVRLWDARSG--KIVQTLETKS-PVTSAEVSRDGRYITT-ADGSSVKFWDAN 216 (268)
Q Consensus 144 ~~~~v~~~~~~~~~~~~~~~~~~---d~~i~iwd~~~~--~~~~~~~~~~-~v~~~~~s~~g~~l~~-~~~~~v~~wd~~ 216 (268)
+........ .+++..++..+.. .+.|.+||+.++ +....+.... .+..+.++ ++.++++ ..++..++|.+.
T Consensus 315 ~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~ 392 (741)
T 1yr2_A 315 DLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFD 392 (741)
T ss_dssp SSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEE
T ss_pred CCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEe
Confidence 333344433 4777776665443 346999999875 3333344333 35567777 4455544 456766666443
Q ss_pred -CceeeeEEeCCCC--ceeeEEcCCCCCEEEec---cCCCeEEEEECCCCcE
Q 024372 217 -HFGLVKGYNMPCN--TESASLEPKLGNIFIAG---GEDMWVHVFDFHTGEQ 262 (268)
Q Consensus 217 -~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g---s~d~~i~~wd~~~g~~ 262 (268)
.++.++.+..+.. ...+.+.++...++++. ...+.|++||+.+|+.
T Consensus 393 ~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~ 444 (741)
T 1yr2_A 393 LDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKT 444 (741)
T ss_dssp TTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEE
T ss_pred CCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 3444555554322 23344555333444433 3467899999988773
No 195
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.58 E-value=3.8e-11 Score=97.94 Aligned_cols=233 Identities=9% Similarity=0.023 Sum_probs=157.2
Q ss_pred cCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEee--CccCcEEEEEecCCCcEEEEeeCCCcEEEEeCCC
Q 024372 15 HSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFE--GHKGAVWSCCLDANALFSASGSADFTAKLWDALT 92 (268)
Q Consensus 15 h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~--~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw~~~~ 92 (268)
+...+.++++.| +|.+.++...++.+..|+.. ++. ..+. .+...+..+++.+++.++++...++.|..||. +
T Consensus 55 ~~~~~~~i~~~~---~g~l~v~~~~~~~i~~~~~~-g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~ 128 (299)
T 2z2n_A 55 PDAKVMCLTISS---DGEVWFTENAANKIGRITKK-GII-KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-D 128 (299)
T ss_dssp TTCCEEEEEECT---TSCEEEEETTTTEEEEECTT-SCE-EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-T
T ss_pred ccCceeeEEECC---CCCEEEeCCCCCeEEEECCC-CcE-EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-C
Confidence 456788898874 78888777778889999876 543 2332 34557889999999988888777889999998 5
Q ss_pred CCeeeee-c-cCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEeeCCCeE
Q 024372 93 GDEKHSF-E-HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGV 170 (268)
Q Consensus 93 ~~~~~~~-~-~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i 170 (268)
+...... . ....+..+.+.+++++.++...++.+..||. +++............+..+++.+++. +.++...++.|
T Consensus 129 g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i 206 (299)
T 2z2n_A 129 GKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDA-LWFVEIIGNKI 206 (299)
T ss_dssp CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSS-EEEEETTTTEE
T ss_pred CCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCC-EEEEccCCceE
Confidence 5443322 1 3346788999999988887777789999997 43321111222234567888877654 55555556899
Q ss_pred EEEeCCCCceEEe-ec-CCCCEEEEEECCCCcEEEEe-CCCeEEEEeCCCceeeeEEeCC---CCceeeEEcCCCCCEEE
Q 024372 171 RLWDARSGKIVQT-LE-TKSPVTSAEVSRDGRYITTA-DGSSVKFWDANHFGLVKGYNMP---CNTESASLEPKLGNIFI 244 (268)
Q Consensus 171 ~iwd~~~~~~~~~-~~-~~~~v~~~~~s~~g~~l~~~-~~~~v~~wd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 244 (268)
.+||. +++.... .. ....+.+++++++|+++++. .++.|..||.. . .+..+..+ ..+..+.+ +++.+++
T Consensus 207 ~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~-g-~~~~~~~~~~~~~~~~i~~--~~g~l~v 281 (299)
T 2z2n_A 207 GRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTSN-N-IIEEYPIQIKSAEPHGICF--DGETIWF 281 (299)
T ss_dssp EEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEETT-T-EEEEEECSSSSCCEEEEEE--CSSCEEE
T ss_pred EEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECCC-C-ceEEEeCCCCCCccceEEe--cCCCEEE
Confidence 99999 6664432 22 23568899999999987776 56899999983 3 34455433 23445555 4688777
Q ss_pred eccCCCeEEEEECCCCc
Q 024372 245 AGGEDMWVHVFDFHTGE 261 (268)
Q Consensus 245 ~gs~d~~i~~wd~~~g~ 261 (268)
+.+ .+.|..+|.++++
T Consensus 282 ~~~-~~~l~~~~~~~~~ 297 (299)
T 2z2n_A 282 AME-CDKIGKLTLIKDN 297 (299)
T ss_dssp EET-TTEEEEEEEC---
T ss_pred Eec-CCcEEEEEcCccc
Confidence 665 4557777776654
No 196
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.58 E-value=1.4e-12 Score=107.10 Aligned_cols=200 Identities=14% Similarity=0.106 Sum_probs=134.8
Q ss_pred eeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCc----cCcEEEEEecCCCcEEEE----eeC--
Q 024372 12 CHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGH----KGAVWSCCLDANALFSAS----GSA-- 81 (268)
Q Consensus 12 ~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h----~~~V~~~~~~~~~~~l~s----~s~-- 81 (268)
+..+...+.+++|+| +|+++++...++.|.+|+..+++........ ...+..+++++++.++++ |..
T Consensus 64 ~~~~~~~~~~l~~~~---dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~ 140 (296)
T 3e5z_A 64 EMHPSHHQNGHCLNK---QGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKP 140 (296)
T ss_dssp EESSCSSEEEEEECT---TCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCG
T ss_pred EECCCCCcceeeECC---CCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccc
Confidence 445667788999985 8988887777889999999888865433221 124567899999998887 331
Q ss_pred -----------CCcEEEEeCCCCCeeeeeccCCeEEEEEECCCCCEEEEeeCCCeEEEEECC-CCCC-C-CeEecCCccc
Q 024372 82 -----------DFTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLN-RPDA-P-PREVGNSSGS 147 (268)
Q Consensus 82 -----------D~~v~iw~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~-~~~~-~-~~~~~~~~~~ 147 (268)
.+.|..++.. +.......+......++|+|+++.+++.+.++.|.+|++. .+.. . ...+....+.
T Consensus 141 ~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~ 219 (296)
T 3e5z_A 141 EEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGK 219 (296)
T ss_dssp GGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSC
T ss_pred cccccccccCCCcEEEEECCC-CCEEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCC
Confidence 2345555544 4443334455567889999999988777888999999986 2221 0 1122223344
Q ss_pred EEEEEEeCCCCcEEEEeeCCCeEEEEeCCCCceEEeecCCCCEEEEEE-CCCCcEEEEeCCCeEEEEeCCCce
Q 024372 148 IRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLETKSPVTSAEV-SRDGRYITTADGSSVKFWDANHFG 219 (268)
Q Consensus 148 v~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~-s~~g~~l~~~~~~~v~~wd~~~~~ 219 (268)
...+++.+++. +.++. ++.|.+||.. ++.+..+.....+.+++| +|+++.|..++.+.+..++.++.+
T Consensus 220 p~~i~~d~~G~-l~v~~--~~~v~~~~~~-g~~~~~~~~~~~~~~~~f~~~d~~~L~v~t~~~l~~~~~~~~~ 288 (296)
T 3e5z_A 220 TDGLRVDAGGL-IWASA--GDGVHVLTPD-GDELGRVLTPQTTSNLCFGGPEGRTLYMTVSTEFWSIETNVRG 288 (296)
T ss_dssp CCSEEEBTTSC-EEEEE--TTEEEEECTT-SCEEEEEECSSCCCEEEEESTTSCEEEEEETTEEEEEECSCCB
T ss_pred CCeEEECCCCC-EEEEc--CCeEEEECCC-CCEEEEEECCCCceeEEEECCCCCEEEEEcCCeEEEEEccccc
Confidence 56688887765 55444 5899999987 777777764434788899 689887655544556556665543
No 197
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.56 E-value=6.5e-13 Score=122.28 Aligned_cols=234 Identities=12% Similarity=0.028 Sum_probs=147.4
Q ss_pred CCCcEEEEEeCCCC---eEEee--CCCCCeEEEe------eCccCcEEEEEecCCCcEEEEeeCCC-----cEEEEeCCC
Q 024372 29 PDGFFLVSASKDSS---PMLRN--GETGDWIGTF------EGHKGAVWSCCLDANALFSASGSADF-----TAKLWDALT 92 (268)
Q Consensus 29 ~dg~~l~s~s~d~~---i~iw~--~~~~~~~~~~------~~h~~~V~~~~~~~~~~~l~s~s~D~-----~v~iw~~~~ 92 (268)
|+|.+++-...++. -.+|- ...++....+ .+|...+..++|+||++++|.++.++ +|++||+.+
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t 160 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG 160 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC
Confidence 57877776654432 14553 3344432112 23545688899999999988665433 899999999
Q ss_pred CCeeeeeccCCeEEEEEECCCCCEEEEeeCCCe----------------EEEEECCCCCCCCeEe-c--CCcccEEEEEE
Q 024372 93 GDEKHSFEHKHIVRACAFSEDTHLLLTGGFEKI----------------LRIFDLNRPDAPPREV-G--NSSGSIRTVAW 153 (268)
Q Consensus 93 ~~~~~~~~~~~~v~~v~~~~~~~~l~s~~~d~~----------------i~~~d~~~~~~~~~~~-~--~~~~~v~~~~~ 153 (268)
++..........+..++|+||++.|+.++.++. |++|++.++....... . .+...+..+.|
T Consensus 161 g~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~ 240 (710)
T 2xdw_A 161 AKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAEL 240 (710)
T ss_dssp TEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEE
T ss_pred CCCCcccccCcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEE
Confidence 887653322222567899999999998887765 9999997654221222 1 13345678899
Q ss_pred eCCCCcEEEEeeC----CCeEEEEeCCC------Cc-eEEeec-CCCCEEEEEECCCCcEEE-EeC----CCeEEEEeCC
Q 024372 154 LHSDQTILSSCTD----SGGVRLWDARS------GK-IVQTLE-TKSPVTSAEVSRDGRYIT-TAD----GSSVKFWDAN 216 (268)
Q Consensus 154 ~~~~~~~~~~~~~----d~~i~iwd~~~------~~-~~~~~~-~~~~v~~~~~s~~g~~l~-~~~----~~~v~~wd~~ 216 (268)
+|++..++.++.. +..|++||+.+ ++ ....+. ....... .++|+|+.++ .+. ...|.+||+.
T Consensus 241 SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~ 319 (710)
T 2xdw_A 241 SDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFT 319 (710)
T ss_dssp CTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETT
T ss_pred cCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCC
Confidence 9999887766542 46899999986 43 344443 3333333 5888887654 333 2469999997
Q ss_pred Cce--eeeEEeCC-C--CceeeEEcCCCCCEEEeccCCC--eEEEEECCCCcEEe
Q 024372 217 HFG--LVKGYNMP-C--NTESASLEPKLGNIFIAGGEDM--WVHVFDFHTGEQIA 264 (268)
Q Consensus 217 ~~~--~~~~~~~~-~--~~~~~~~~~~~~~~~~~gs~d~--~i~~wd~~~g~~~~ 264 (268)
+.. ..+.+..+ . ....+.+.+ .+.+++++..|+ .|++||..+|+.+.
T Consensus 320 ~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~lv~~~~~~g~~~l~~~~~~~g~~~~ 373 (710)
T 2xdw_A 320 DPEESKWKVLVPEHEKDVLEWVACVR-SNFLVLCYLHDVKNTLQLHDLATGALLK 373 (710)
T ss_dssp SCCGGGCEEEECCCSSCEEEEEEEET-TTEEEEEEEETTEEEEEEEETTTCCEEE
T ss_pred CCCcccceeccCCCCCCeEEEEEEEc-CCEEEEEEEECCEEEEEEEECCCCCEEE
Confidence 653 12333222 2 223445553 577788888887 46777876777544
No 198
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.54 E-value=1.7e-11 Score=105.60 Aligned_cols=233 Identities=12% Similarity=0.040 Sum_probs=156.6
Q ss_pred CCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCCC--cEEEEeCCCCC
Q 024372 17 RPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADF--TAKLWDALTGD 94 (268)
Q Consensus 17 ~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~--~v~iw~~~~~~ 94 (268)
.....++|+ ++|+++++...++.|+.||..+++......... ... +++++++..++.+..++ .|.+++...+.
T Consensus 131 ~~P~~la~d---~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~-~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~ 205 (409)
T 3hrp_A 131 KYMWGIAAV---GNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFK-GGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGW 205 (409)
T ss_dssp CCEEEEEEC---STTEEEEEETTTTEEEEEETTTTEEEEEEETCC-BCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTT
T ss_pred CCceEEEEe---CCCCEEEEecCCCcEEEEECCCCEEEEeeccCC-CCc-eeEecCCCcEEEEecCCCceEEEEEcCCCc
Confidence 356688887 488888888888999999998887665544432 233 88999999888777655 78888887655
Q ss_pred eeeee----c-cCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeE---ecCCcccE--EEEEEeCCCCcEEEEe
Q 024372 95 EKHSF----E-HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPRE---VGNSSGSI--RTVAWLHSDQTILSSC 164 (268)
Q Consensus 95 ~~~~~----~-~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~---~~~~~~~v--~~~~~~~~~~~~~~~~ 164 (268)
....+ . ....+..++++|++..|+.+..++.|..||.......... .....+.. ..+++.|.++.++++.
T Consensus 206 ~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d 285 (409)
T 3hrp_A 206 APTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSD 285 (409)
T ss_dssp CEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEE
T ss_pred eeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEe
Confidence 43333 2 3345678999995445555677889999998754321110 11111222 2789999777788777
Q ss_pred eCCCeEEEEeCCCCceEEeecC---------------CCCEEEEEECCCCcEEEEe--CCCeEEEEeCCCceeeeEEeCC
Q 024372 165 TDSGGVRLWDARSGKIVQTLET---------------KSPVTSAEVSRDGRYITTA--DGSSVKFWDANHFGLVKGYNMP 227 (268)
Q Consensus 165 ~~d~~i~iwd~~~~~~~~~~~~---------------~~~v~~~~~s~~g~~l~~~--~~~~v~~wd~~~~~~~~~~~~~ 227 (268)
...+.|+.||.... ....... -.....++++|+|+++++. .++.|+.||+..+.. .++...
T Consensus 286 ~~~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v-~~~~g~ 363 (409)
T 3hrp_A 286 QNLSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYV-STVAGQ 363 (409)
T ss_dssp TTTTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEE-EEEEEC
T ss_pred CCCCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEE-EEEeCC
Confidence 77789999997643 2221111 1247899999999877664 468999999766543 333221
Q ss_pred ----------------CCceeeEEcCCCCCEEEeccCCCeEEEEEC
Q 024372 228 ----------------CNTESASLEPKLGNIFIAGGEDMWVHVFDF 257 (268)
Q Consensus 228 ----------------~~~~~~~~~~~~~~~~~~gs~d~~i~~wd~ 257 (268)
..+..+++.++ |.++++-..+..|+.+++
T Consensus 364 ~~~~g~~~g~~~~~~~~~P~giavd~~-g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 364 VDVASQIDGTPLEATFNYPYDICYDGE-GGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp TTCBSCCCBSTTTCCBSSEEEEEECSS-SEEEEEESTTCEEEEEEE
T ss_pred CCCCCcCCCChhceEeCCceEEEEcCC-CCEEEEECCCCeEEEEEe
Confidence 12455666764 888888888888888764
No 199
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.54 E-value=5.4e-12 Score=115.88 Aligned_cols=239 Identities=16% Similarity=0.088 Sum_probs=150.7
Q ss_pred ecCCCeeeEEEecCCCCCcEEEE-----EeCCCCeEEeeCCCCCeEEE-eeCccCcEEEEEecCCCcEEEEeeCCC----
Q 024372 14 GHSRPVVDLFYSPITPDGFFLVS-----ASKDSSPMLRNGETGDWIGT-FEGHKGAVWSCCLDANALFSASGSADF---- 83 (268)
Q Consensus 14 ~h~~~v~~~~f~~~~~dg~~l~s-----~s~d~~i~iw~~~~~~~~~~-~~~h~~~V~~~~~~~~~~~l~s~s~D~---- 83 (268)
+|...+.+++|+ |||++||- |+...+|++||+.+|+.+.. +.+. ....++|+ |++.|+.++.+.
T Consensus 126 ~~~~~l~~~~~S---pDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~--k~~~~~Ws-Dg~~l~y~~~~~~~~~ 199 (693)
T 3iuj_A 126 DGTTALDQLSFS---RDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDV--KFSGISWL-GNEGFFYSSYDKPDGS 199 (693)
T ss_dssp TSCCEEEEEEEC---TTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEE--ESCCCEEE-TTTEEEEEESSCCC--
T ss_pred CCcEEEEEEEEC---CCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCc--eeccEEEe-CCCEEEEEEecCcccc
Confidence 455567788887 59998883 34446789999999986543 2211 12467899 999888877764
Q ss_pred ---------cEEEEeCCCCCe--eeeec----cCCeEEEEEECCCCCEEEEee----CCCeEEEEECCCCCCCCeEecCC
Q 024372 84 ---------TAKLWDALTGDE--KHSFE----HKHIVRACAFSEDTHLLLTGG----FEKILRIFDLNRPDAPPREVGNS 144 (268)
Q Consensus 84 ---------~v~iw~~~~~~~--~~~~~----~~~~v~~v~~~~~~~~l~s~~----~d~~i~~~d~~~~~~~~~~~~~~ 144 (268)
.|++|++.+... ...+. +......+.++||++.|+... ..+.+.++|+..+......+..+
T Consensus 200 ~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~ 279 (693)
T 3iuj_A 200 ELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGD 279 (693)
T ss_dssp -----CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECS
T ss_pred cccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCC
Confidence 399999987653 22232 233467889999999775432 33589999987664344444444
Q ss_pred cccEEEEEEeCCCCcEEEEeeCC---CeEEEEeCCCCce--EEee-cCCCCEEEEEECCCCcEEEEe--CCC--eEEEEe
Q 024372 145 SGSIRTVAWLHSDQTILSSCTDS---GGVRLWDARSGKI--VQTL-ETKSPVTSAEVSRDGRYITTA--DGS--SVKFWD 214 (268)
Q Consensus 145 ~~~v~~~~~~~~~~~~~~~~~~d---~~i~iwd~~~~~~--~~~~-~~~~~v~~~~~s~~g~~l~~~--~~~--~v~~wd 214 (268)
....... +.++++.++.....+ +.|..+|+.++.. .+.+ .+...+. .++++++.|+.. .++ .|++||
T Consensus 280 ~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d 356 (693)
T 3iuj_A 280 LDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFD 356 (693)
T ss_dssp SSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEEC
T ss_pred CCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEE
Confidence 4444443 456666666555443 5799999988754 2333 3333444 899998876543 343 688999
Q ss_pred CCCceeeeEEeCCCCc--eeeEEcCCCCCEEEeccC---CCeEEEEECCCCcE
Q 024372 215 ANHFGLVKGYNMPCNT--ESASLEPKLGNIFIAGGE---DMWVHVFDFHTGEQ 262 (268)
Q Consensus 215 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~gs~---d~~i~~wd~~~g~~ 262 (268)
+... ..+....+... ..+...++.+.++++.+. -..|+.||+.+|+.
T Consensus 357 ~~g~-~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~ 408 (693)
T 3iuj_A 357 YEGK-RVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAI 408 (693)
T ss_dssp TTSC-EEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCE
T ss_pred CCCC-eeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeE
Confidence 8743 34444443322 223334443445444433 27899999987764
No 200
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.54 E-value=1.3e-11 Score=110.40 Aligned_cols=192 Identities=16% Similarity=0.129 Sum_probs=143.7
Q ss_pred CCCcEEEEeeCCCcEEEEeCCCCCeeeeeccCCeEEEEEECCCCCEEEEeeCCCeEEEEECC--CCCCCCeEecCCcccE
Q 024372 71 ANALFSASGSADFTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLN--RPDAPPREVGNSSGSI 148 (268)
Q Consensus 71 ~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~--~~~~~~~~~~~~~~~v 148 (268)
+.+.++++...+++|.++|..+++.+..+.....+..+.|+|+++++++++.|+.|.+||+. +.+. ...+.. ....
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~-v~~i~~-G~~P 242 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTT-VAEIKI-GSEA 242 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCE-EEEEEC-CSEE
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeCCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcE-eEEEec-CCCC
Confidence 44567788889999999999999999888877778899999999999999999999999985 3322 223322 2235
Q ss_pred EEEEEe----CCCCcEEEEeeCCCeEEEEeCCCCceEEeecCC------------CCEEEEEECCCCcEEE-E-eCCCeE
Q 024372 149 RTVAWL----HSDQTILSSCTDSGGVRLWDARSGKIVQTLETK------------SPVTSAEVSRDGRYIT-T-ADGSSV 210 (268)
Q Consensus 149 ~~~~~~----~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~------------~~v~~~~~s~~g~~l~-~-~~~~~v 210 (268)
..++++ |++..+++++..+++|.++|..+.+.++++... ..+..+..++++..++ . .+.+.|
T Consensus 243 ~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v 322 (567)
T 1qks_A 243 RSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKI 322 (567)
T ss_dssp EEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEE
T ss_pred ceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeE
Confidence 678998 588888888888899999999999998876531 2577888899876543 3 356899
Q ss_pred EEEeCCCceee--eEEeCCCCceeeEEcCCCCCEEEec-cCCCeEEEEECCCCcEEee
Q 024372 211 KFWDANHFGLV--KGYNMPCNTESASLEPKLGNIFIAG-GEDMWVHVFDFHTGEQIAI 265 (268)
Q Consensus 211 ~~wd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g-s~d~~i~~wd~~~g~~~~~ 265 (268)
.++|....+.+ ..+..........+.+ ++++|+++ ..+..|.++|+++++.+..
T Consensus 323 ~~vd~~~~~~~~v~~i~~~~~~~d~~~~p-dgr~~~va~~~sn~V~ViD~~t~kl~~~ 379 (567)
T 1qks_A 323 LLVDYTDLNNLKTTEISAERFLHDGGLDG-SHRYFITAANARNKLVVIDTKEGKLVAI 379 (567)
T ss_dssp EEEETTCSSEEEEEEEECCSSEEEEEECT-TSCEEEEEEGGGTEEEEEETTTTEEEEE
T ss_pred EEEecCCCccceeeeeeccccccCceECC-CCCEEEEEeCCCCeEEEEECCCCcEEEE
Confidence 99998765433 2333333344566777 67776654 4677899999999987654
No 201
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.53 E-value=2.7e-12 Score=108.81 Aligned_cols=239 Identities=14% Similarity=0.088 Sum_probs=156.8
Q ss_pred eEEEecCCCCCcEEEEEe----------CCCCeEEeeCCCCCeEEEeeCcc-------CcEEEEEecCCCcEEEEeeC--
Q 024372 21 DLFYSPITPDGFFLVSAS----------KDSSPMLRNGETGDWIGTFEGHK-------GAVWSCCLDANALFSASGSA-- 81 (268)
Q Consensus 21 ~~~f~~~~~dg~~l~s~s----------~d~~i~iw~~~~~~~~~~~~~h~-------~~V~~~~~~~~~~~l~s~s~-- 81 (268)
.++++| ||++|..+. .+..|.+||..+++.+.++.-.. ..-..++++||+++++.+..
T Consensus 82 ~va~sp---DG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~ 158 (386)
T 3sjl_D 82 NPVVAD---DGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSP 158 (386)
T ss_dssp EEEECT---TSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSS
T ss_pred cEEECC---CCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCC
Confidence 388874 999887775 36789999999999988885211 13345789999998876653
Q ss_pred CCcEEEEeCCCCCeeeeeccCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEecC----CcccEE-EEEEeCC
Q 024372 82 DFTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGN----SSGSIR-TVAWLHS 156 (268)
Q Consensus 82 D~~v~iw~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~----~~~~v~-~~~~~~~ 156 (268)
++.|.++|+.+++.+.++..+... ..+....+.+++.+.||.+-+.++............ ...++. ...|...
T Consensus 159 ~~~VsVID~~t~~vv~tI~v~g~~--~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~ 236 (386)
T 3sjl_D 159 APAVGVVDLEGKAFKRMLDVPDCY--HIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQK 236 (386)
T ss_dssp SCEEEEEETTTTEEEEEEECCSEE--EEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETT
T ss_pred CCeEEEEECCCCcEEEEEECCCcc--eeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcC
Confidence 689999999999998888654431 112223445556667777777776542111111100 111221 1344444
Q ss_pred CCcEEEEeeCCCeEEEEeCCCCc--eEEeec--------C---CCCEEEEEECCCCcEEEEe--C---------CCeEEE
Q 024372 157 DQTILSSCTDSGGVRLWDARSGK--IVQTLE--------T---KSPVTSAEVSRDGRYITTA--D---------GSSVKF 212 (268)
Q Consensus 157 ~~~~~~~~~~d~~i~iwd~~~~~--~~~~~~--------~---~~~v~~~~~s~~g~~l~~~--~---------~~~v~~ 212 (268)
++.++.. +.+|+|.+.|+.++. .+..+. . ......++++|+++.+... . ...|-+
T Consensus 237 dG~~~~v-s~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~v 315 (386)
T 3sjl_D 237 AGRLVWP-TYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVV 315 (386)
T ss_dssp TTEEEEE-BTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEE
T ss_pred CCcEEEE-eCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEE
Confidence 4544433 346899999997664 333322 0 1223457789988765432 1 247999
Q ss_pred EeCCCceeeeEEeCCCCceeeEEcCCCCC-EEEe-ccCCCeEEEEECCCCcEEeec
Q 024372 213 WDANHFGLVKGYNMPCNTESASLEPKLGN-IFIA-GGEDMWVHVFDFHTGEQIAIT 266 (268)
Q Consensus 213 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-gs~d~~i~~wd~~~g~~~~~~ 266 (268)
.|+.+++.++.+........+.++++ ++ +|++ ...++.|.++|..+++.+...
T Consensus 316 iD~~t~kv~~~i~vg~~~~~lavs~D-~~~~ly~tn~~~~~VsViD~~t~k~~~~i 370 (386)
T 3sjl_D 316 LDAKTGERLAKFEMGHEIDSINVSQD-EKPLLYALSTGDKTLYIHDAESGEELRSV 370 (386)
T ss_dssp EETTTCCEEEEEEEEEEECEEEECSS-SSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred EECCCCeEEEEEECCCCcceEEECCC-CCeEEEEEcCCCCeEEEEECCCCcEEEEe
Confidence 99999999999888767778888884 54 5554 566889999999999988753
No 202
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.52 E-value=4.2e-10 Score=91.74 Aligned_cols=237 Identities=8% Similarity=-0.009 Sum_probs=162.6
Q ss_pred ecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEE-EeeCccCcEEEEEecCCCcEEEEeeCCCcEEEEeCCC
Q 024372 14 GHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIG-TFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALT 92 (268)
Q Consensus 14 ~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~-~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw~~~~ 92 (268)
.....+.++++.+ +|++.++...++.|.+++.. ++... .+..+...+..+++.+++.+.++...++.|..+|..
T Consensus 17 ~~~~~p~~i~~d~---~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~- 91 (300)
T 2qc5_A 17 IPDSGPYGITSSE---DGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK- 91 (300)
T ss_dssp STTCCEEEEEECT---TSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-
T ss_pred CCCCCcceeeECC---CCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-
Confidence 4456778998874 88888877788999999988 76543 223344678899999999887777778899999987
Q ss_pred CCeeee-ec-cCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEeeCCCeE
Q 024372 93 GDEKHS-FE-HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGV 170 (268)
Q Consensus 93 ~~~~~~-~~-~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i 170 (268)
+..... .. ....+..+.+.+++++.++...++.|..+|.. ++...............+++.+++. +.++...++.|
T Consensus 92 g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~i 169 (300)
T 2qc5_A 92 GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNA-LWFTENQNNSI 169 (300)
T ss_dssp SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSS-EEEEETTTTEE
T ss_pred CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCC-EEEEecCCCeE
Confidence 544322 11 23567889999999988877778889999875 3321111122334577888877665 55555556899
Q ss_pred EEEeCCCCceEEe-ec-CCCCEEEEEECCCCcEEEEeC-CCeEEEEeCCCceeeeEEeCC---CCceeeEEcCCCCCEEE
Q 024372 171 RLWDARSGKIVQT-LE-TKSPVTSAEVSRDGRYITTAD-GSSVKFWDANHFGLVKGYNMP---CNTESASLEPKLGNIFI 244 (268)
Q Consensus 171 ~iwd~~~~~~~~~-~~-~~~~v~~~~~s~~g~~l~~~~-~~~v~~wd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 244 (268)
..+|. +++.... .. ....+..++++++|++.++.. ++.|..||. ... +..+..+ ..+..+.+.+ +|++++
T Consensus 170 ~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~-~~~~~~~~~~~~~~~i~~d~-~g~l~v 245 (300)
T 2qc5_A 170 GRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGE-ISEYDIPTPNARPHAITAGK-NSEIWF 245 (300)
T ss_dssp EEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCC-EEEEECSSTTCCEEEEEECS-TTCEEE
T ss_pred EEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCc-EEEEECCCCCCCceEEEECC-CCCEEE
Confidence 99998 5655432 21 234588999999998877764 568999998 333 2233322 2345566666 588777
Q ss_pred eccCCCeEEEEECCCCcE
Q 024372 245 AGGEDMWVHVFDFHTGEQ 262 (268)
Q Consensus 245 ~gs~d~~i~~wd~~~g~~ 262 (268)
+...++.|..||. +|+.
T Consensus 246 ~~~~~~~i~~~~~-~g~~ 262 (300)
T 2qc5_A 246 TEWGANQIGRITN-DNTI 262 (300)
T ss_dssp EETTTTEEEEECT-TSCE
T ss_pred eccCCCeEEEECC-CCcE
Confidence 7777788999997 4554
No 203
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.51 E-value=1.1e-10 Score=95.97 Aligned_cols=226 Identities=11% Similarity=0.046 Sum_probs=151.6
Q ss_pred cCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCCCcEEEEeCCCCC
Q 024372 15 HSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGD 94 (268)
Q Consensus 15 h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~ 94 (268)
+..---+..|+| .++.++++...++.|..|+..+++.. .+. ....+..+++++++.++++. +..|.+||..++.
T Consensus 11 ~~~~~Egp~w~~--~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~~~~i~~~~dG~l~v~~--~~~l~~~d~~~g~ 84 (297)
T 3g4e_A 11 NCRCGESPVWEE--VSNSLLFVDIPAKKVCRWDSFTKQVQ-RVT-MDAPVSSVALRQSGGYVATI--GTKFCALNWKEQS 84 (297)
T ss_dssp CCSBEEEEEEET--TTTEEEEEETTTTEEEEEETTTCCEE-EEE-CSSCEEEEEEBTTSSEEEEE--TTEEEEEETTTTE
T ss_pred CCccccCCeEEC--CCCEEEEEECCCCEEEEEECCCCcEE-EEe-CCCceEEEEECCCCCEEEEE--CCeEEEEECCCCc
Confidence 333444788886 35677888888899999999888653 333 34678999999999966554 5689999998776
Q ss_pred eeeeecc-----CCeEEEEEECCCCCEEEEeeCC---------CeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcE
Q 024372 95 EKHSFEH-----KHIVRACAFSEDTHLLLTGGFE---------KILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTI 160 (268)
Q Consensus 95 ~~~~~~~-----~~~v~~v~~~~~~~~l~s~~~d---------~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 160 (268)
....... ...++.+.++|++++.++.... ..-.+|.+.... ............+.++|+|++..+
T Consensus 85 ~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~~~~~~~~pngi~~spdg~~l 163 (297)
T 3g4e_A 85 AVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH-HVKKYFDQVDISNGLDWSLDHKIF 163 (297)
T ss_dssp EEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS-CEEEEEEEESBEEEEEECTTSCEE
T ss_pred EEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC-CEEEEeeccccccceEEcCCCCEE
Confidence 5433321 2347889999999977654321 223455443221 122222222345788999988877
Q ss_pred EEEeeCCCeEEEEeC--CCCceE-----EeecC-CCCEEEEEECCCCcEEEEe-CCCeEEEEeCCCceeeeEEeCCC-Cc
Q 024372 161 LSSCTDSGGVRLWDA--RSGKIV-----QTLET-KSPVTSAEVSRDGRYITTA-DGSSVKFWDANHFGLVKGYNMPC-NT 230 (268)
Q Consensus 161 ~~~~~~d~~i~iwd~--~~~~~~-----~~~~~-~~~v~~~~~s~~g~~l~~~-~~~~v~~wd~~~~~~~~~~~~~~-~~ 230 (268)
+++.+.++.|.+||+ .+++.. ..+.. ...+..++++++|++.++. .++.|..||..+++.+..+..+. .+
T Consensus 164 yv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~ 243 (297)
T 3g4e_A 164 YYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKT 243 (297)
T ss_dssp EEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBE
T ss_pred EEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCc
Confidence 777777789999987 555432 22221 2457889999999887765 56789999998888888888773 56
Q ss_pred eeeEEc-CCCCCEEEecc
Q 024372 231 ESASLE-PKLGNIFIAGG 247 (268)
Q Consensus 231 ~~~~~~-~~~~~~~~~gs 247 (268)
.++++. ++.+.++++.+
T Consensus 244 t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 244 TSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp EEEEEESGGGCEEEEEEB
T ss_pred eEEEEeCCCCCEEEEEcC
Confidence 677776 43345556544
No 204
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.51 E-value=6.2e-12 Score=101.50 Aligned_cols=198 Identities=8% Similarity=-0.077 Sum_probs=136.7
Q ss_pred cCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEee-CccCcEEEEEecCCCcEEEEeeCCCcEEEEeCCCC
Q 024372 15 HSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFE-GHKGAVWSCCLDANALFSASGSADFTAKLWDALTG 93 (268)
Q Consensus 15 h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~-~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw~~~~~ 93 (268)
+...+.++++.| +|+++++.. ++.|.+|+...+... .+. .....+..+++.+++.++++...++.|.+|+..+.
T Consensus 65 ~~~~p~~i~~~~---~g~l~v~~~-~~~i~~~d~~~~~~~-~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~ 139 (270)
T 1rwi_B 65 GLYQPQGLAVDG---AGTVYVTDF-NNRVVTLAAGSNNQT-VLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSK 139 (270)
T ss_dssp SCCSCCCEEECT---TCCEEEEET-TTEEEEECTTCSCCE-ECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCC
T ss_pred CcCCcceeEECC---CCCEEEEcC-CCEEEEEeCCCceEe-eeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCc
Confidence 334677899974 787666555 888999998765433 333 23356889999999988888777889999986554
Q ss_pred Ceeeee-ccCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEeeCCCeEEE
Q 024372 94 DEKHSF-EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRL 172 (268)
Q Consensus 94 ~~~~~~-~~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~i 172 (268)
...... .....+..++++++++++++...++.|..||....... ............+++.+++ .++++...++.|.+
T Consensus 140 ~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~-~~~~~~~~~p~~i~~d~~g-~l~v~~~~~~~v~~ 217 (270)
T 1rwi_B 140 TQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQV-VLPFTDITAPWGIAVDEAG-TVYVTEHNTNQVVK 217 (270)
T ss_dssp SCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEE-ECCCSSCCSEEEEEECTTC-CEEEEETTTSCEEE
T ss_pred eeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceE-eecccCCCCceEEEECCCC-CEEEEECCCCcEEE
Confidence 433222 12235678899999998877777889999997643211 1111222457788888776 66666666689999
Q ss_pred EeCCCCceEEeecC-CCCEEEEEECCCCcEEEEe-CCCeEEEEeCCCce
Q 024372 173 WDARSGKIVQTLET-KSPVTSAEVSRDGRYITTA-DGSSVKFWDANHFG 219 (268)
Q Consensus 173 wd~~~~~~~~~~~~-~~~v~~~~~s~~g~~l~~~-~~~~v~~wd~~~~~ 219 (268)
||............ ...+.+++++|+|+++++. .++.|+++++...+
T Consensus 218 ~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 218 LLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp ECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGG
T ss_pred EcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCcc
Confidence 99976554332222 2458899999999876664 57899999986543
No 205
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.48 E-value=7.5e-11 Score=97.38 Aligned_cols=234 Identities=12% Similarity=0.077 Sum_probs=153.7
Q ss_pred EEeeecCCCeeeEEEecCCCCCc-EEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCCCcEEEE
Q 024372 10 LVCHGHSRPVVDLFYSPITPDGF-FLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLW 88 (268)
Q Consensus 10 ~~~~~h~~~v~~~~f~~~~~dg~-~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw 88 (268)
..+..+....-+..|+| +|+ ++++...++.+..|+. +++ ...+..+...+..+++++++.++++...++.|.+|
T Consensus 38 ~~l~~~~~~~egp~~~~---~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~ 112 (305)
T 3dr2_A 38 LTLYDQATWSEGPAWWE---AQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRS 112 (305)
T ss_dssp EEEECCCSSEEEEEEEG---GGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEE
T ss_pred EEEecCCcCccCCeEeC---CCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEE
Confidence 33444555666888985 777 6778888899999987 565 34555566788999999999977766666889999
Q ss_pred eCCCCCeeeeecc-----CCeEEEEEECCCCCEEEE----eeC-------------CCeEEEEECCCCCCCCeEecCCcc
Q 024372 89 DALTGDEKHSFEH-----KHIVRACAFSEDTHLLLT----GGF-------------EKILRIFDLNRPDAPPREVGNSSG 146 (268)
Q Consensus 89 ~~~~~~~~~~~~~-----~~~v~~v~~~~~~~~l~s----~~~-------------d~~i~~~d~~~~~~~~~~~~~~~~ 146 (268)
+.. +........ ...++.+.+++++++.++ |.. .+.|..||..+++. .... ...
T Consensus 113 ~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~--~~~~-~~~ 188 (305)
T 3dr2_A 113 DAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPL--QRMA-DLD 188 (305)
T ss_dssp CTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCC--EEEE-EES
T ss_pred CCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcE--EEEe-cCC
Confidence 975 443222211 123567899999998886 432 24577777644432 2222 233
Q ss_pred cEEEEEEeCCCCcEEEEeeC-----CCeEEEEeCCCCce--EEeec--CCCCEEEEEECCCCcEEEEeCCCeEEEEeCCC
Q 024372 147 SIRTVAWLHSDQTILSSCTD-----SGGVRLWDARSGKI--VQTLE--TKSPVTSAEVSRDGRYITTADGSSVKFWDANH 217 (268)
Q Consensus 147 ~v~~~~~~~~~~~~~~~~~~-----d~~i~iwd~~~~~~--~~~~~--~~~~v~~~~~s~~g~~l~~~~~~~v~~wd~~~ 217 (268)
....++|+|++..++++.+. .+.|.+||+..+.. ...+. .......++++++|++.++.. +.|.+||..
T Consensus 189 ~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~~-~gv~~~~~~- 266 (305)
T 3dr2_A 189 HPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSSG-TGVCVFDSD- 266 (305)
T ss_dssp SEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECCS-SEEEEECTT-
T ss_pred CCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEecC-CcEEEECCC-
Confidence 45778999988766665544 26899999875431 11111 123356789999999776664 469999984
Q ss_pred ceeeeEEeCCCCceeeEEcCCCCCEEEeccCCCeEEEEE
Q 024372 218 FGLVKGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFD 256 (268)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~d~~i~~wd 256 (268)
.+.+..+..+..+..+++.+ +++.|..++.++ ++.++
T Consensus 267 g~~~~~~~~~~~~~~~~f~~-d~~~L~it~~~~-l~~~~ 303 (305)
T 3dr2_A 267 GQLLGHIPTPGTASNCTFDQ-AQQRLFITGGPC-LWMLP 303 (305)
T ss_dssp SCEEEEEECSSCCCEEEECT-TSCEEEEEETTE-EEEEE
T ss_pred CCEEEEEECCCceeEEEEeC-CCCEEEEEcCCe-EEEEE
Confidence 56677777766666777775 566666555554 44443
No 206
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.45 E-value=1.8e-09 Score=87.94 Aligned_cols=231 Identities=7% Similarity=0.015 Sum_probs=154.9
Q ss_pred cCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEE-EeeCccCcEEEEEecCCCcEEEEeeCCCcEEEEeCCCC
Q 024372 15 HSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIG-TFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTG 93 (268)
Q Consensus 15 h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~-~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw~~~~~ 93 (268)
+...+.++++. ++|++.++...++.|..+|.. ++... .+......+..+++.+++.+.++...++.|..++.. +
T Consensus 60 ~~~~~~~i~~~---~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g 134 (300)
T 2qc5_A 60 PDAKVMCLIVS---SLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-G 134 (300)
T ss_dssp TTCCEEEEEEC---TTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-S
T ss_pred CCCcceeEEEC---CCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-C
Confidence 34567888887 478877777667889999987 66532 222244678899999999888877778899999987 5
Q ss_pred Ceeee-ec-cCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEeeCCCeEE
Q 024372 94 DEKHS-FE-HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVR 171 (268)
Q Consensus 94 ~~~~~-~~-~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~ 171 (268)
..... .. ....+..+.+.+++++.++...++.|..||. .++...............+++.+++ .+.++....+.|.
T Consensus 135 ~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~i~ 212 (300)
T 2qc5_A 135 TIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDG-ALWFVEIMGNKIG 212 (300)
T ss_dssp CEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTS-SEEEEETTTTEEE
T ss_pred CEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCC-CEEEEccCCCEEE
Confidence 44322 22 2346788999999997777666788999987 3322111111223457788887765 5655555557899
Q ss_pred EEeCCCCceEEe-ec-CCCCEEEEEECCCCcEEEEeC-CCeEEEEeCCCceeeeEEeCC---CCceeeEEcCCCCCEEEe
Q 024372 172 LWDARSGKIVQT-LE-TKSPVTSAEVSRDGRYITTAD-GSSVKFWDANHFGLVKGYNMP---CNTESASLEPKLGNIFIA 245 (268)
Q Consensus 172 iwd~~~~~~~~~-~~-~~~~v~~~~~s~~g~~l~~~~-~~~v~~wd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 245 (268)
+||. +++.... +. ....+.+++++++|+++++.. ++.|..||.. . .+..+..+ ..+..+...+ +|.++++
T Consensus 213 ~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~-g-~~~~~~~~~~~~~~~~i~~~~-~g~l~v~ 288 (300)
T 2qc5_A 213 RITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITND-N-TIQEYQLQTENAEPHGITFGK-DGSVWFA 288 (300)
T ss_dssp EECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-S-CEEEEECCSTTCCCCCEEECT-TSCEEEE
T ss_pred EEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEECCC-C-cEEEEECCccCCccceeEeCC-CCCEEEE
Confidence 9998 5554432 22 234588999999998777663 5899999984 3 33345443 2345566665 5887776
Q ss_pred ccCCCeEEEEECC
Q 024372 246 GGEDMWVHVFDFH 258 (268)
Q Consensus 246 gs~d~~i~~wd~~ 258 (268)
.. + .|..+|.+
T Consensus 289 ~~-~-~i~~~~p~ 299 (300)
T 2qc5_A 289 LK-C-KIGKLNLN 299 (300)
T ss_dssp CS-S-EEEEEEEC
T ss_pred cc-C-ceEEeCCC
Confidence 65 5 67777753
No 207
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.44 E-value=3.8e-11 Score=111.02 Aligned_cols=231 Identities=12% Similarity=0.038 Sum_probs=140.4
Q ss_pred CCCcEEEEEeCCCC---eEEeeC--C---CCCeEEEe------eCccCcEEEEEecCCCcEEEEeeCC-----CcEEEEe
Q 024372 29 PDGFFLVSASKDSS---PMLRNG--E---TGDWIGTF------EGHKGAVWSCCLDANALFSASGSAD-----FTAKLWD 89 (268)
Q Consensus 29 ~dg~~l~s~s~d~~---i~iw~~--~---~~~~~~~~------~~h~~~V~~~~~~~~~~~l~s~s~D-----~~v~iw~ 89 (268)
|+|.+++-...++. -.+|.. . .++...-+ .+|...+..++|+|||+++|.++.+ .+|++||
T Consensus 116 pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~d 195 (741)
T 1yr2_A 116 RRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVG 195 (741)
T ss_dssp EETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEE
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEE
Confidence 68888887776654 566743 2 33322211 2344468889999999998876543 4699999
Q ss_pred CCCCCeeeeeccCCeEEEEEECCCCCEEEEeeCCCe--------------EEEEECCCCCCCCeEe-cC--CcccEEEEE
Q 024372 90 ALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFEKI--------------LRIFDLNRPDAPPREV-GN--SSGSIRTVA 152 (268)
Q Consensus 90 ~~~~~~~~~~~~~~~v~~v~~~~~~~~l~s~~~d~~--------------i~~~d~~~~~~~~~~~-~~--~~~~v~~~~ 152 (268)
+.+++......+...+..++|+|| +.|+.++.++. |++|++.++....... .. +...+..+.
T Consensus 196 l~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~ 274 (741)
T 1yr2_A 196 VADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGAS 274 (741)
T ss_dssp TTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEE
T ss_pred CCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEE
Confidence 999887554222222356889999 88888776654 8889987553211222 21 222477889
Q ss_pred EeCCCCcEEEEeeC----CCeEEEEeCCCC--ceEEee-cCCCCEEEEEECCCCcEEE-EeC----CCeEEEEeCCCc--
Q 024372 153 WLHSDQTILSSCTD----SGGVRLWDARSG--KIVQTL-ETKSPVTSAEVSRDGRYIT-TAD----GSSVKFWDANHF-- 218 (268)
Q Consensus 153 ~~~~~~~~~~~~~~----d~~i~iwd~~~~--~~~~~~-~~~~~v~~~~~s~~g~~l~-~~~----~~~v~~wd~~~~-- 218 (268)
|+|++..++.++.+ ...|++||+.++ ++...+ ......... ++|+|+.++ .++ ...|.+||+...
T Consensus 275 ~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~ 353 (741)
T 1yr2_A 275 VSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTP 353 (741)
T ss_dssp ECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSC
T ss_pred ECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCcc
Confidence 99998877766643 248999999877 413333 333333333 348887654 343 346999998764
Q ss_pred eeeeEEeCCCCce-eeEEcCCCCCEEEeccCCCeEEEEECC-CCcEE
Q 024372 219 GLVKGYNMPCNTE-SASLEPKLGNIFIAGGEDMWVHVFDFH-TGEQI 263 (268)
Q Consensus 219 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~gs~d~~i~~wd~~-~g~~~ 263 (268)
.....+....... .+.+. .+.++++...|+..++|.+. +|+.+
T Consensus 354 ~~~~l~~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~g~~~ 398 (741)
T 1yr2_A 354 RFDTVVPESKDNLESVGIA--GNRLFASYIHDAKSQVLAFDLDGKPA 398 (741)
T ss_dssp EEEEEECCCSSEEEEEEEE--BTEEEEEEEETTEEEEEEEETTSCEE
T ss_pred ccEEEecCCCCeEEEEEEE--CCEEEEEEEECCEEEEEEEeCCCCce
Confidence 2222232222222 23333 46777888888877776543 35543
No 208
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.44 E-value=3.4e-11 Score=102.15 Aligned_cols=230 Identities=16% Similarity=0.165 Sum_probs=155.3
Q ss_pred CCCcEEEEEeC-----CCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEee----------CCCcEEEEeCCCC
Q 024372 29 PDGFFLVSASK-----DSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGS----------ADFTAKLWDALTG 93 (268)
Q Consensus 29 ~dg~~l~s~s~-----d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s----------~D~~v~iw~~~~~ 93 (268)
|+|+.+..+.. ++.+.+.|..+++.+.++..-..+ . ++++||+++++.++ .++.|.+||..+.
T Consensus 42 pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~ 119 (386)
T 3sjl_D 42 PDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTL 119 (386)
T ss_dssp CCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC
Confidence 68888888866 678999999999999999755555 4 99999998776554 4678999999999
Q ss_pred CeeeeeccC--------CeEEEEEECCCCCEEEEeeC--CCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEE
Q 024372 94 DEKHSFEHK--------HIVRACAFSEDTHLLLTGGF--EKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSS 163 (268)
Q Consensus 94 ~~~~~~~~~--------~~v~~v~~~~~~~~l~s~~~--d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 163 (268)
+....+... ..-..+.|+||+++++.+.. ++.+.++|+.+.+.. ..+... + |....|.+...+++
T Consensus 120 ~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv-~tI~v~-g---~~~~~P~g~~~~~~ 194 (386)
T 3sjl_D 120 LPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFK-RMLDVP-D---CYHIFPTAPDTFFM 194 (386)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEE-EEEECC-S---EEEEEEEETTEEEE
T ss_pred eEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEE-EEEECC-C---cceeecCCCceeEE
Confidence 988877532 13446889999999988864 689999999865432 233211 1 11223545444445
Q ss_pred eeCCCeEEEEeCCC-CceEEeecC-----CCCE-EEEEE-CCCCcEEEEeCCCeEEEEeCCCc--eeeeEEeC-------
Q 024372 164 CTDSGGVRLWDARS-GKIVQTLET-----KSPV-TSAEV-SRDGRYITTADGSSVKFWDANHF--GLVKGYNM------- 226 (268)
Q Consensus 164 ~~~d~~i~iwd~~~-~~~~~~~~~-----~~~v-~~~~~-s~~g~~l~~~~~~~v~~wd~~~~--~~~~~~~~------- 226 (268)
.+.||++.+.++.+ ++...+... ..++ ....| .++|+++..+.++.|.+.|+... ..++.+..
T Consensus 195 ~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~ 274 (386)
T 3sjl_D 195 HCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERA 274 (386)
T ss_dssp EETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHH
T ss_pred ECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceecccccccc
Confidence 55679999999976 565332211 1122 22355 57898877777889999999654 23444431
Q ss_pred ----CCCceeeEEcCCCCCEEEeccC---------CCeEEEEECCCCcEEee
Q 024372 227 ----PCNTESASLEPKLGNIFIAGGE---------DMWVHVFDFHTGEQIAI 265 (268)
Q Consensus 227 ----~~~~~~~~~~~~~~~~~~~gs~---------d~~i~~wd~~~g~~~~~ 265 (268)
+.......+++..++++++-.. ...|.+.|+++++.+..
T Consensus 275 ~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~ 326 (386)
T 3sjl_D 275 DGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAK 326 (386)
T ss_dssp TTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEE
T ss_pred ccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEE
Confidence 2334456666655566665321 25699999999998765
No 209
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.43 E-value=4.4e-12 Score=107.88 Aligned_cols=168 Identities=11% Similarity=0.053 Sum_probs=123.0
Q ss_pred CeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCC-----------eEEEeeCccCcEEEEEecCCCcEEEEeeCCCcEE
Q 024372 18 PVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGD-----------WIGTFEGHKGAVWSCCLDANALFSASGSADFTAK 86 (268)
Q Consensus 18 ~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~-----------~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~ 86 (268)
+++.++++| .+.++++|+.++. ++|+.++.+ ..... .+.. |..++| ++.+|+.+ .++.|+
T Consensus 39 ~~nlLais~---~~gll~a~~~~~l-~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d~~~L~v~-~~~~l~ 109 (388)
T 1xip_A 39 SLQNLDISN---SKSLFVAASGSKA-VVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--HGDQVLVS-TRNALY 109 (388)
T ss_dssp CCBCEEEET---TTTEEEEEETTEE-EEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--ETTEEEEE-ESSEEE
T ss_pred cccEEEEcC---CCCEEEEeCCCEE-EEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--CCCEEEEE-cCCcEE
Confidence 688999985 6678999999855 558644322 11122 3556 999999 88888888 889999
Q ss_pred EEeCCCCCeeeee-ccCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEee
Q 024372 87 LWDALTGDEKHSF-EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCT 165 (268)
Q Consensus 87 iw~~~~~~~~~~~-~~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 165 (268)
+||+.+....... .+...+..+.+.+. .+++++.||.+.+||+..... .. +...+++++|+|.+ ++ .+.
T Consensus 110 v~dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~--~~---~~~~Vs~v~WSpkG--~~-vg~ 179 (388)
T 1xip_A 110 SLDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKST--KQ---LAQNVTSFDVTNSQ--LA-VLL 179 (388)
T ss_dssp EEESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCE--EE---EEESEEEEEECSSE--EE-EEE
T ss_pred EEEchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcc--cc---ccCCceEEEEcCCc--eE-EEE
Confidence 9998766543333 45666777776554 288889999999999975432 11 34579999999988 34 455
Q ss_pred CCCeEEEEeCCCCce--EEee------c----CCCCEEEEEECCCCcEEEE
Q 024372 166 DSGGVRLWDARSGKI--VQTL------E----TKSPVTSAEVSRDGRYITT 204 (268)
Q Consensus 166 ~d~~i~iwd~~~~~~--~~~~------~----~~~~v~~~~~s~~g~~l~~ 204 (268)
.||.+++|+...+++ ..++ . +...|.++.|.+++.++++
T Consensus 180 ~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 180 KDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp TTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred cCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 679999999988775 5555 2 3456999999999999875
No 210
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.43 E-value=6.4e-10 Score=94.60 Aligned_cols=199 Identities=14% Similarity=0.054 Sum_probs=127.0
Q ss_pred eEEEecCCCCCcEEEEEe----------CCCCeEEeeCCCCCeEEEeeCc-------cCcEEEEEecCCCcEEEEeeC--
Q 024372 21 DLFYSPITPDGFFLVSAS----------KDSSPMLRNGETGDWIGTFEGH-------KGAVWSCCLDANALFSASGSA-- 81 (268)
Q Consensus 21 ~~~f~~~~~dg~~l~s~s----------~d~~i~iw~~~~~~~~~~~~~h-------~~~V~~~~~~~~~~~l~s~s~-- 81 (268)
.++|+| ||++|..+. .+..+.++|..+++.+.++.-- ...-..++++||+++++.++.
T Consensus 70 ~i~~sp---Dg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~ 146 (373)
T 2mad_H 70 NPVAAH---SGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAA 146 (373)
T ss_pred CeEECC---CCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCC
Confidence 888884 999999886 3678999999999888777432 122347889999999887764
Q ss_pred CCcEEEEeCCCCCeeee-eccCCeEEE--------EEECCCCCEEEE---------------------------------
Q 024372 82 DFTAKLWDALTGDEKHS-FEHKHIVRA--------CAFSEDTHLLLT--------------------------------- 119 (268)
Q Consensus 82 D~~v~iw~~~~~~~~~~-~~~~~~v~~--------v~~~~~~~~l~s--------------------------------- 119 (268)
+..|.++| .+++.... +..+..+.. +.+++++++++.
T Consensus 147 ~~~v~viD-~t~~~~~~~i~~~~~~~~~~~~~~~~~~~~~dg~~~~vd~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 225 (373)
T 2mad_H 147 GPAVGLVV-QGGSSDDQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSG 225 (373)
T ss_pred CCeEEEEE-CCCCEEeEEcCCCceEEEEeCCCceEEEEcCCCCEEEEECCCcEEEEEeccccccCCcceeecceeEecCC
Confidence 57899999 99988777 654332111 112222221111
Q ss_pred ----eeCCCeEEEEECCCCCCCC-eEecC----------CcccEEEEEEeCCCCcEEEEee---------CCCeEEEEeC
Q 024372 120 ----GGFEKILRIFDLNRPDAPP-REVGN----------SSGSIRTVAWLHSDQTILSSCT---------DSGGVRLWDA 175 (268)
Q Consensus 120 ----~~~d~~i~~~d~~~~~~~~-~~~~~----------~~~~v~~~~~~~~~~~~~~~~~---------~d~~i~iwd~ 175 (268)
.+..+.+.+.|+....... ..+.. .......+.+++++..++++.. ..+.|.+.|+
T Consensus 226 ~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~ 305 (373)
T 2mad_H 226 RIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTG 305 (373)
T ss_pred EEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEEC
Confidence 1122233333332111000 00000 0011222566677666666543 1358999999
Q ss_pred CCCceEEeecCCCCEEEEEECCCCc-EEEEe--CCCeEEEEeCCCceeeeE
Q 024372 176 RSGKIVQTLETKSPVTSAEVSRDGR-YITTA--DGSSVKFWDANHFGLVKG 223 (268)
Q Consensus 176 ~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~--~~~~v~~wd~~~~~~~~~ 223 (268)
.+++.+.++........++|+|||+ ++.++ .++.|.++|+.+++.++.
T Consensus 306 ~t~~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 306 LVGQTSSQISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred CCCEEEEEEECCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEee
Confidence 9999999987666688999999998 55554 378999999999988876
No 211
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.42 E-value=2.1e-11 Score=105.02 Aligned_cols=232 Identities=16% Similarity=0.128 Sum_probs=149.7
Q ss_pred CCCcEEEEEeCC-----CCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEee----------CCCcEEEEeCCCC
Q 024372 29 PDGFFLVSASKD-----SSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGS----------ADFTAKLWDALTG 93 (268)
Q Consensus 29 ~dg~~l~s~s~d-----~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s----------~D~~v~iw~~~~~ 93 (268)
+++..+..+... ++|.+.|..+++.+.++..-..+ .++++||+++++.+. .++.|.++|..++
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 566666666553 58999999999999999754455 789999998776554 4679999999999
Q ss_pred CeeeeeccC--------CeEEEEEECCCCCEEEEeeC--CCeEEEEECCCCCCCCeEecCCcc-------cEEEEEEeCC
Q 024372 94 DEKHSFEHK--------HIVRACAFSEDTHLLLTGGF--EKILRIFDLNRPDAPPREVGNSSG-------SIRTVAWLHS 156 (268)
Q Consensus 94 ~~~~~~~~~--------~~v~~v~~~~~~~~l~s~~~--d~~i~~~d~~~~~~~~~~~~~~~~-------~v~~~~~~~~ 156 (268)
+....+... .....+.|+||+++++.+.. ++.|.+.|+.+.+.. ..+.-... ....+.++++
T Consensus 160 ~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv-~~I~v~g~~~~~p~g~~~~v~~~~d 238 (426)
T 3c75_H 160 LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFD-RMLDVPDCYHIFPASPTVFYMNCRD 238 (426)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEE-EEEECCSEEEEEEEETTEEEEEETT
T ss_pred cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEE-EEEEcCCceeeccCCCcEEEEEcCC
Confidence 988776532 22346789999999998874 578999998765432 22211000 0000122222
Q ss_pred CC-------------------------------------cEEEEeeCCCeEEEEeCCCCceE--EeecC-----------
Q 024372 157 DQ-------------------------------------TILSSCTDSGGVRLWDARSGKIV--QTLET----------- 186 (268)
Q Consensus 157 ~~-------------------------------------~~~~~~~~d~~i~iwd~~~~~~~--~~~~~----------- 186 (268)
+. .++... ..+.+.+.|...+... ..+..
T Consensus 239 G~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s-~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~ 317 (426)
T 3c75_H 239 GSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPT-YTGKIFQADLTAEGATFRAPIEALTEAERADDWR 317 (426)
T ss_dssp SSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEB-TTSEEEEEEECSSCEEECCCEESSCTTTGGGTEE
T ss_pred CCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEe-CCCcEEEEeccCCceEEeeeeeeccccccccccc
Confidence 22 122221 2234444444332211 11100
Q ss_pred CCCEEEEEECCCCcEEEEe-C----------CCeEEEEeCCCceeeeEEeCCCCceeeEEcCCCCC-EEEecc-CCCeEE
Q 024372 187 KSPVTSAEVSRDGRYITTA-D----------GSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGN-IFIAGG-EDMWVH 253 (268)
Q Consensus 187 ~~~v~~~~~s~~g~~l~~~-~----------~~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~gs-~d~~i~ 253 (268)
......++++|+++.+... . ++.|.+.|+.+.+.++++.....+..+.+.+ +|+ ++++.. .++.|.
T Consensus 318 p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~P~gia~sp-Dg~~~lyv~n~~s~~Vs 396 (426)
T 3c75_H 318 PGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGHEIDSINVSQ-DAEPLLYALSAGTQTLH 396 (426)
T ss_dssp ECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECC-SSSCEEEEEETTTTEEE
T ss_pred cCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCCCcCeEEEcc-CCCEEEEEEcCCCCeEE
Confidence 0011226889997754332 1 2479999999999999998776677888888 466 666655 689999
Q ss_pred EEECCCCcEEee
Q 024372 254 VFDFHTGEQIAI 265 (268)
Q Consensus 254 ~wd~~~g~~~~~ 265 (268)
++|+.+++.+..
T Consensus 397 VID~~t~kvv~t 408 (426)
T 3c75_H 397 IYDAATGEELRS 408 (426)
T ss_dssp EEETTTCCEEEE
T ss_pred EEECCCCCEEEE
Confidence 999999998865
No 212
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.41 E-value=1.7e-09 Score=90.10 Aligned_cols=220 Identities=9% Similarity=-0.022 Sum_probs=144.0
Q ss_pred eeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCCCcEEEEeCCCCCeeee
Q 024372 19 VVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEKHS 98 (268)
Q Consensus 19 v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~ 98 (268)
.-+..|+| .++.++++...++.|..|+..+++.. .+. +...+.++++++++.++++. . ..|.+||..++.....
T Consensus 51 ~egp~~~~--~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~dg~l~v~~-~-~gl~~~d~~~g~~~~~ 124 (326)
T 2ghs_A 51 GEGPTFDP--ASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQLIAS-D-DGLFLRDTATGVLTLH 124 (326)
T ss_dssp EEEEEEET--TTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEEEEEE-T-TEEEEEETTTCCEEEE
T ss_pred CcCCeEeC--CCCEEEEEECCCCEEEEEECCCCcEE-EEE-CCCcceEEEEeCCCeEEEEE-C-CCEEEEECCCCcEEEE
Confidence 34778886 23667777888899999999887643 333 34678999999999887754 3 3499999887775433
Q ss_pred ecc-----CCeEEEEEECCCCCEEEEeeC------CCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEeeCC
Q 024372 99 FEH-----KHIVRACAFSEDTHLLLTGGF------EKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDS 167 (268)
Q Consensus 99 ~~~-----~~~v~~v~~~~~~~~l~s~~~------d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d 167 (268)
... ...++.+.++|++++.++... .+.|..++ .++ .............++|++++..++++.+.+
T Consensus 125 ~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~--~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~ 200 (326)
T 2ghs_A 125 AELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGK--VTKLFADISIPNSICFSPDGTTGYFVDTKV 200 (326)
T ss_dssp ECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTE--EEEEEEEESSEEEEEECTTSCEEEEEETTT
T ss_pred eeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCc--EEEeeCCCcccCCeEEcCCCCEEEEEECCC
Confidence 321 135788999999997765432 23454555 222 122211223456789999887776666666
Q ss_pred CeEEEEeCC--CC-c-----eEEeecC-CCCEEEEEECCCCcEEEEe-CCCeEEEEeCCCceeeeEEeCCCC-ceeeEEc
Q 024372 168 GGVRLWDAR--SG-K-----IVQTLET-KSPVTSAEVSRDGRYITTA-DGSSVKFWDANHFGLVKGYNMPCN-TESASLE 236 (268)
Q Consensus 168 ~~i~iwd~~--~~-~-----~~~~~~~-~~~v~~~~~s~~g~~l~~~-~~~~v~~wd~~~~~~~~~~~~~~~-~~~~~~~ 236 (268)
+.|.+||+. ++ + .+..+.. ...+..++++++|+++++. .++.|..||. ..+.+..+..+.. +..+++.
T Consensus 201 ~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~ 279 (326)
T 2ghs_A 201 NRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFI 279 (326)
T ss_dssp CEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEE
T ss_pred CEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEe
Confidence 899999986 55 3 2223322 2346789999999887765 4578999998 4566677776653 5566666
Q ss_pred CCCCC-EEEeccCC
Q 024372 237 PKLGN-IFIAGGED 249 (268)
Q Consensus 237 ~~~~~-~~~~gs~d 249 (268)
.++++ ++++...+
T Consensus 280 g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 280 GPDASRLLVTSARE 293 (326)
T ss_dssp STTSCEEEEEEBCT
T ss_pred cCCCCEEEEEecCC
Confidence 23454 44554433
No 213
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.41 E-value=9.8e-12 Score=105.72 Aligned_cols=169 Identities=13% Similarity=0.060 Sum_probs=122.0
Q ss_pred cEEEEEecCCCcEEEEeeCCCcEEEEeCCCCC-----------eeeeeccCCeEEEEEECCCCCEEEEeeCCCeEEEEEC
Q 024372 63 AVWSCCLDANALFSASGSADFTAKLWDALTGD-----------EKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDL 131 (268)
Q Consensus 63 ~V~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~-----------~~~~~~~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~ 131 (268)
++..+++++...++++|+.+ .+++|++.... ......++. |..++| ++++|+++ .++.|++||+
T Consensus 39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv 113 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDL 113 (388)
T ss_dssp CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEES
T ss_pred cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEc
Confidence 68889999999999999987 55569864322 223445667 999999 89999998 8899999998
Q ss_pred CCCCCCCeEecCCcccEEEEEEeCCCCcEEEEeeCCCeEEEEeCCCCceEEeecCCCCEEEEEECCCCcEEEEeCCCeEE
Q 024372 132 NRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYITTADGSSVK 211 (268)
Q Consensus 132 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~v~ 211 (268)
.+-. .......+...+..+.+.++. ++.++.||.|.+||+..++... ....|.+++|||+| .+++..|+.++
T Consensus 114 ~sl~-~~~~~~~~~~~v~~i~~~~p~---~av~~~dG~L~v~dl~~~~~~~---~~~~Vs~v~WSpkG-~~vg~~dg~i~ 185 (388)
T 1xip_A 114 EELS-EFRTVTSFEKPVFQLKNVNNT---LVILNSVNDLSALDLRTKSTKQ---LAQNVTSFDVTNSQ-LAVLLKDRSFQ 185 (388)
T ss_dssp SSTT-CEEEEEECSSCEEEEEECSSE---EEEEETTSEEEEEETTTCCEEE---EEESEEEEEECSSE-EEEEETTSCEE
T ss_pred hhhh-ccCccceeecceeeEEecCCC---EEEEECCCCEEEEEccCCcccc---ccCCceEEEEcCCc-eEEEEcCCcEE
Confidence 7543 223333455678888777653 5556778999999999887654 23469999999999 55667789999
Q ss_pred EEeCCCcee--eeEEe----------CCCCceeeEEcCCCCCEEEe
Q 024372 212 FWDANHFGL--VKGYN----------MPCNTESASLEPKLGNIFIA 245 (268)
Q Consensus 212 ~wd~~~~~~--~~~~~----------~~~~~~~~~~~~~~~~~~~~ 245 (268)
+|+...... .+++. ....+.++.|.+ .+.++++
T Consensus 186 ~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~-~~~flv~ 230 (388)
T 1xip_A 186 SFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILS-PQDFLAV 230 (388)
T ss_dssp EEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESS-SSEEEEE
T ss_pred EEcCCCccccccceecCCcccccccCCCeeEEEEEEec-CCeEEEE
Confidence 998876654 44442 123355667776 4777775
No 214
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.36 E-value=4.9e-11 Score=101.01 Aligned_cols=226 Identities=8% Similarity=-0.045 Sum_probs=145.8
Q ss_pred EEEEEeCCC----CeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEee----------CCCcEEEEeCCCCCeeee
Q 024372 33 FLVSASKDS----SPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGS----------ADFTAKLWDALTGDEKHS 98 (268)
Q Consensus 33 ~l~s~s~d~----~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s----------~D~~v~iw~~~~~~~~~~ 98 (268)
..++-..+. ++.+.|..+++.+.++..-..+ .+.++||+++++.+. .+++|.+||..+++....
T Consensus 34 ~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~ 111 (368)
T 1mda_H 34 SHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIAD 111 (368)
T ss_dssp EEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEE
T ss_pred EEEECCccCCccceEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEE
Confidence 444444454 6679999999999999754456 699999998876664 478999999999999888
Q ss_pred eccC--------CeEEEEEECCCCCEEEEeeC--CCeEEE--EECCCCCCCCeEecC------------------CcccE
Q 024372 99 FEHK--------HIVRACAFSEDTHLLLTGGF--EKILRI--FDLNRPDAPPREVGN------------------SSGSI 148 (268)
Q Consensus 99 ~~~~--------~~v~~v~~~~~~~~l~s~~~--d~~i~~--~d~~~~~~~~~~~~~------------------~~~~v 148 (268)
+... .....+.++||+++++.+.. ++.+.+ +|+.+ ...+.- ..+.+
T Consensus 112 I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t----v~~i~v~~~~~~~p~g~~~~~~~~~dg~~ 187 (368)
T 1mda_H 112 IELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD----DQLTKSASCFHIHPGAAATHYLGSCPASL 187 (368)
T ss_dssp EEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE----EEEEECSSCCCCEEEETTEEECCCCTTSC
T ss_pred EECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh----ceEEECCCceEEccCCCeEEEEEcCCCCE
Confidence 7543 23457889999999998874 467888 88743 111100 00000
Q ss_pred EEEEE--------------------------eCCCCcEEEEeeCCCeEEEEeCCCCc--eEEeecCC-----------CC
Q 024372 149 RTVAW--------------------------LHSDQTILSSCTDSGGVRLWDARSGK--IVQTLETK-----------SP 189 (268)
Q Consensus 149 ~~~~~--------------------------~~~~~~~~~~~~~d~~i~iwd~~~~~--~~~~~~~~-----------~~ 189 (268)
..+.. .++++.++.+. . +.+.+.|+.+.. .+..+... ..
T Consensus 188 ~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs-~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g 265 (368)
T 1mda_H 188 AASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAV-A-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAG 265 (368)
T ss_dssp EEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECB-S-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECS
T ss_pred EEEECccccccCCeEEEEeeeeeeCCCCccccccCCEEEEEc-C-CEEEEEECCCCcceEEEEEEeccccccccccccCc
Confidence 00100 22222222222 2 556666765432 22222110 01
Q ss_pred EEEEEECCCCcEEEE--e-C-------CCeEEEEeCCCceeeeEEeCCCCceeeEEcCCCCCEEEecc-CCCeEEEEECC
Q 024372 190 VTSAEVSRDGRYITT--A-D-------GSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGG-EDMWVHVFDFH 258 (268)
Q Consensus 190 v~~~~~s~~g~~l~~--~-~-------~~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs-~d~~i~~wd~~ 258 (268)
...++++|+++.+.. . . +..+.++|+.+.+.++.+.....+..+.+.++...++++.. .++.|.++|+.
T Consensus 266 ~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~ 345 (368)
T 1mda_H 266 FQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAA 345 (368)
T ss_dssp SSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEETTTTEEEEEESS
T ss_pred ceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCCCcceEEECCCCCEEEEEccCCCCeEEEEECC
Confidence 112789999876543 2 1 23566999999998888877666778888874334677777 68999999999
Q ss_pred CCcEEeec
Q 024372 259 TGEQIAIT 266 (268)
Q Consensus 259 ~g~~~~~~ 266 (268)
+++.+...
T Consensus 346 t~kvv~~I 353 (368)
T 1mda_H 346 SDQDQSSV 353 (368)
T ss_dssp SCEEEEEC
T ss_pred CCcEEEEE
Confidence 99988653
No 215
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.33 E-value=1.9e-09 Score=92.75 Aligned_cols=197 Identities=13% Similarity=0.118 Sum_probs=133.8
Q ss_pred CcEEEEEecCCCcEEEEeeCCCcEEEEeCCCCCeeeeeccCCeEEEEEECCCCCEEEEeeCCC--eEEEEECCCCCCCCe
Q 024372 62 GAVWSCCLDANALFSASGSADFTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFEK--ILRIFDLNRPDAPPR 139 (268)
Q Consensus 62 ~~V~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~s~~~d~--~i~~~d~~~~~~~~~ 139 (268)
.....+++++++.++++...++.|++||..++............. ++|+++++.|+.+..++ .|..++...... ..
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~-~~ 208 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWA-PT 208 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTC-EE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCce-eE
Confidence 356789999999988888888999999998877655544433334 88999999888888765 788888754332 12
Q ss_pred Ee----cCCcccEEEEEEeCCCCcEEEEeeCCCeEEEEeCCCCceEEe----ecCCCCE---EEEEECCC-CcEEEEe-C
Q 024372 140 EV----GNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQT----LETKSPV---TSAEVSRD-GRYITTA-D 206 (268)
Q Consensus 140 ~~----~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~----~~~~~~v---~~~~~s~~-g~~l~~~-~ 206 (268)
.. .........+++.|+++.++++ ..++.|+.||..++..... ....... ..++++|+ +.++++. .
T Consensus 209 ~~g~~~~~~~~~p~~iav~p~~g~lyv~-d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~ 287 (409)
T 3hrp_A 209 RIGQLGSTFSGKIGAVALDETEEWLYFV-DSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN 287 (409)
T ss_dssp EEEECCTTSCSCCCBCEECTTSSEEEEE-CTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT
T ss_pred EeeeccchhcCCcEEEEEeCCCCeEEEE-ECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCC
Confidence 22 1123455678888866777664 4568999999987764332 2112112 28999995 6555554 4
Q ss_pred CCeEEEEeCCCceeeeEEeCC----------------CCceeeEEcCCCCCEEEecc-CCCeEEEEECCCCcEEe
Q 024372 207 GSSVKFWDANHFGLVKGYNMP----------------CNTESASLEPKLGNIFIAGG-EDMWVHVFDFHTGEQIA 264 (268)
Q Consensus 207 ~~~v~~wd~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~gs-~d~~i~~wd~~~g~~~~ 264 (268)
.+.|+.||.... +..+... ..+..+++.+ +|+++++-+ .+..|+.|+..+|+...
T Consensus 288 ~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~-dG~lyvad~~~~~~I~~~~~~~G~v~~ 359 (409)
T 3hrp_A 288 LSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDE-DGNFYIVDGFKGYCLRKLDILDGYVST 359 (409)
T ss_dssp TTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECT-TCCEEEEETTTTCEEEEEETTTTEEEE
T ss_pred CCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeC-CCCEEEEeCCCCCEEEEEECCCCEEEE
Confidence 678999997643 2222111 1245566776 588888888 89999999987777543
No 216
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.33 E-value=4.7e-10 Score=92.31 Aligned_cols=196 Identities=10% Similarity=0.087 Sum_probs=128.7
Q ss_pred cCCCeeeEEEecCCCC-CcEEEEEeCCCCeEEeeCCCCCeEEE-eeC----ccCcEEEEEecCCCcEEEEeeCC------
Q 024372 15 HSRPVVDLFYSPITPD-GFFLVSASKDSSPMLRNGETGDWIGT-FEG----HKGAVWSCCLDANALFSASGSAD------ 82 (268)
Q Consensus 15 h~~~v~~~~f~~~~~d-g~~l~s~s~d~~i~iw~~~~~~~~~~-~~~----h~~~V~~~~~~~~~~~l~s~s~D------ 82 (268)
+...+.+++++| + |+++++.. ...+.+|+.. ++.... ... +...+..+++++++.+.++...+
T Consensus 69 ~~~~~~~i~~~~---~~g~l~v~~~-~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~ 143 (314)
T 1pjx_A 69 YGGIPAGCQCDR---DANQLFVADM-RLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPAD 143 (314)
T ss_dssp EECCEEEEEECS---SSSEEEEEET-TTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSC
T ss_pred CCCCCceEEEec---CCCcEEEEEC-CCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCccccccc
Confidence 446688899874 7 76555444 4478889988 776533 221 12357899999999887776655
Q ss_pred ---------CcEEEEeCCCCCeeeeeccCCeEEEEEEC----CCCCEEEE-eeCCCeEEEEECC-CCCCC----CeEecC
Q 024372 83 ---------FTAKLWDALTGDEKHSFEHKHIVRACAFS----EDTHLLLT-GGFEKILRIFDLN-RPDAP----PREVGN 143 (268)
Q Consensus 83 ---------~~v~iw~~~~~~~~~~~~~~~~v~~v~~~----~~~~~l~s-~~~d~~i~~~d~~-~~~~~----~~~~~~ 143 (268)
+.|..++.. +..............++++ ++++.++. ...++.|.+||+. .+... ......
T Consensus 144 ~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~ 222 (314)
T 1pjx_A 144 YTRSMQEKFGSIYCFTTD-GQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPG 222 (314)
T ss_dssp CCBTTSSSCEEEEEECTT-SCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCC
T ss_pred ccccccCCCCeEEEECCC-CCEEEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCC
Confidence 466667765 4443333333456788899 99865544 4567899999975 22110 011111
Q ss_pred Cc-ccEEEEEEeCCCCcEEEEeeCCCeEEEEeCCCCceEEeecCC-CCEEEEEECCCCcEE-EEe-CCCeEEEEeCCC
Q 024372 144 SS-GSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLETK-SPVTSAEVSRDGRYI-TTA-DGSSVKFWDANH 217 (268)
Q Consensus 144 ~~-~~v~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~-~~v~~~~~s~~g~~l-~~~-~~~~v~~wd~~~ 217 (268)
+. +....+++.+++ .+.++...++.|.+||.++++.+..+... ..+.+++++|+|+.| +++ .++.|..|++..
T Consensus 223 ~~~~~p~~i~~d~~G-~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 223 THEGGADGMDFDEDN-NLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp CSSCEEEEEEEBTTC-CEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred CCCCCCCceEECCCC-CEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 22 456778888766 56656556689999999877776666543 568899999999844 444 356899999764
No 217
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.33 E-value=1.6e-12 Score=110.58 Aligned_cols=192 Identities=11% Similarity=0.022 Sum_probs=110.4
Q ss_pred CCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCCCcEEEEeCCCCCeeeeeccC--CeEEE
Q 024372 30 DGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEKHSFEHK--HIVRA 107 (268)
Q Consensus 30 dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~--~~v~~ 107 (268)
++.++++++.|+.+..||..+|+.+-++.. +.+.+..+..++..+++++.|+.++.||..+++.+..+... ..+.+
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence 567899999999999999999998877765 45554445566767778889999999999888876555321 11110
Q ss_pred -EEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEeeCCCeEEEEeCCCCceEEeecC
Q 024372 108 -CAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLET 186 (268)
Q Consensus 108 -v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~ 186 (268)
..+. .+..+++++.++.+..||..+++........ . ....+|.++.+++ ++.++.|+.||.++|+.+..+..
T Consensus 86 sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~-~----~~~~~p~~~~v~~-~~~dg~v~a~d~~tG~~~W~~~~ 158 (369)
T 2hz6_A 86 SPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSA-F----ADSLSPSTSLLYL-GRTEYTITMYDTKTRELRWNATY 158 (369)
T ss_dssp CSCC------CCCCEEEEEEEEECCC---------------------------EEE-EEEEEEEECCCSSSSSCCCEEEE
T ss_pred CceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCC-C----cccccccCCEEEE-EecCCEEEEEECCCCCEEEeEec
Confidence 0011 3456778888999999999877654332211 1 1233455555554 45569999999999987655432
Q ss_pred CCCEEEEEECCC----CcEEEEeCCCeEEEEeCCCceeeeEEeCCCCce
Q 024372 187 KSPVTSAEVSRD----GRYITTADGSSVKFWDANHFGLVKGYNMPCNTE 231 (268)
Q Consensus 187 ~~~v~~~~~s~~----g~~l~~~~~~~v~~wd~~~~~~~~~~~~~~~~~ 231 (268)
.. .....++++ +.+++++.++.|..||.++++.+..+.......
T Consensus 159 ~~-~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~pv~ 206 (369)
T 2hz6_A 159 FD-YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYASPVV 206 (369)
T ss_dssp EE-ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECSSCEE
T ss_pred cc-ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecCCCceE
Confidence 11 112233332 566777788999999999988887776554433
No 218
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.31 E-value=6.3e-10 Score=101.79 Aligned_cols=233 Identities=11% Similarity=0.050 Sum_probs=152.9
Q ss_pred CcEEEEEeCCCCeEEeeCCCCCeEEEeeCc-c----CcEEE-EEecCCCcEEEEee-----CCCcEEEEeCCCCCeeeee
Q 024372 31 GFFLVSASKDSSPMLRNGETGDWIGTFEGH-K----GAVWS-CCLDANALFSASGS-----ADFTAKLWDALTGDEKHSF 99 (268)
Q Consensus 31 g~~l~s~s~d~~i~iw~~~~~~~~~~~~~h-~----~~V~~-~~~~~~~~~l~s~s-----~D~~v~iw~~~~~~~~~~~ 99 (268)
+..++.++.|+.+..+|..+|+.+-++..+ . ..+.. ..+ .++..++..+ .++.|+.+|..+++.+..+
T Consensus 128 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v-~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~ 206 (677)
T 1kb0_A 128 KGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRV-FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRW 206 (677)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEE-ECCEEEEEecccccCCCCEEEEEECCCCcEEEEe
Confidence 457888999999999999999988766654 1 11111 111 1344444332 2799999999999987665
Q ss_pred ccCCe---------------------------------EEEEEECCCCCEEEEeeCCC-------------------eEE
Q 024372 100 EHKHI---------------------------------VRACAFSEDTHLLLTGGFEK-------------------ILR 127 (268)
Q Consensus 100 ~~~~~---------------------------------v~~v~~~~~~~~l~s~~~d~-------------------~i~ 127 (268)
..... ...+.+++++.+++.+..++ .|.
T Consensus 207 ~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~ 286 (677)
T 1kb0_A 207 FSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIV 286 (677)
T ss_dssp ESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEE
T ss_pred ccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEE
Confidence 42110 12467888888888877654 488
Q ss_pred EEECCCCCCCCeEecC-Cc--------ccEEEEEEeCCCC--cEEEEeeCCCeEEEEeCCCCceEEeecCCC--------
Q 024372 128 IFDLNRPDAPPREVGN-SS--------GSIRTVAWLHSDQ--TILSSCTDSGGVRLWDARSGKIVQTLETKS-------- 188 (268)
Q Consensus 128 ~~d~~~~~~~~~~~~~-~~--------~~v~~~~~~~~~~--~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~-------- 188 (268)
.+|..+++........ +. .++. +....++. .+++.++.+|.+.++|.++|+.+..+....
T Consensus 287 AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l-~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d 365 (677)
T 1kb0_A 287 ALDPDTGKYKWHYQETPGDNWDYTSTQPMIL-ADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYD 365 (677)
T ss_dssp EECTTTCCEEEEEESSTTCCSCCCCCSCCEE-EEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEC
T ss_pred EEECCCCCEEEEEecCCCcccccccCCCcEE-EecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccC
Confidence 8888877654433221 11 1211 22222332 456677788999999999999886654210
Q ss_pred ---C-------------------------EEEEEECCCCcEEEEe-C---------------------------------
Q 024372 189 ---P-------------------------VTSAEVSRDGRYITTA-D--------------------------------- 206 (268)
Q Consensus 189 ---~-------------------------v~~~~~s~~g~~l~~~-~--------------------------------- 206 (268)
. ...++++|+..++... .
T Consensus 366 ~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~ 445 (677)
T 1kb0_A 366 KHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKF 445 (677)
T ss_dssp TTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEE
T ss_pred CCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccc
Confidence 0 1246788887665432 1
Q ss_pred ----------CCeEEEEeCCCceeeeEEeCCCCceeeEEcCCCCCEEEeccCCCeEEEEECCCCcEEeec
Q 024372 207 ----------GSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIAIT 266 (268)
Q Consensus 207 ----------~~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~d~~i~~wd~~~g~~~~~~ 266 (268)
.+.|..||+.+++.+-.+..........+.. .+.+++.++.|+.+++||.++|+++..+
T Consensus 446 ~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~-~g~~v~~g~~dg~l~a~D~~tG~~lw~~ 514 (677)
T 1kb0_A 446 FNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGGTLTT-AGNVVFQGTADGRLVAYHAATGEKLWEA 514 (677)
T ss_dssp ECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCCCEEEE-TTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred cccccCCCCCccEEEEEeCCCCcEEeecCCCCCCcCcceEe-CCCEEEEECCCCcEEEEECCCCceeeee
Confidence 1679999999998887776654444444444 4667777899999999999999998754
No 219
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.30 E-value=7.1e-10 Score=95.51 Aligned_cols=201 Identities=15% Similarity=0.070 Sum_probs=132.3
Q ss_pred eEEEecCCCCCcEEEEEe----------CCCCeEEeeCCCCCeEEEeeCc-------cCcEEEEEecCCCcEEEEeeC--
Q 024372 21 DLFYSPITPDGFFLVSAS----------KDSSPMLRNGETGDWIGTFEGH-------KGAVWSCCLDANALFSASGSA-- 81 (268)
Q Consensus 21 ~~~f~~~~~dg~~l~s~s----------~d~~i~iw~~~~~~~~~~~~~h-------~~~V~~~~~~~~~~~l~s~s~-- 81 (268)
.++++| ||++|..+. .++.|.++|..+++.++++.-- ...-..+.++||+++++.+..
T Consensus 122 gia~Sp---Dgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~ 198 (426)
T 3c75_H 122 HPVAAE---DGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSP 198 (426)
T ss_dssp EEEECT---TSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSS
T ss_pred ceEECC---CCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCC
Confidence 788885 899888876 4678999999999998887521 122345689999998877664
Q ss_pred CCcEEEEeCCCCCeeeeeccCCeE--------EEEEECCCCCEEEEee--------------------------------
Q 024372 82 DFTAKLWDALTGDEKHSFEHKHIV--------RACAFSEDTHLLLTGG-------------------------------- 121 (268)
Q Consensus 82 D~~v~iw~~~~~~~~~~~~~~~~v--------~~v~~~~~~~~l~s~~-------------------------------- 121 (268)
++.|.+.|+.+++.+..+.....+ ..+.+++++++++...
T Consensus 199 ~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~ 278 (426)
T 3c75_H 199 APAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGR 278 (426)
T ss_dssp SCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCE
T ss_pred CCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCE
Confidence 578999999998887766543211 1133444444443332
Q ss_pred -----CCCeEEEEECCCCCCCC-eEec----------CCcccEEEEEEeCCCCcEEEEee---------CCCeEEEEeCC
Q 024372 122 -----FEKILRIFDLNRPDAPP-REVG----------NSSGSIRTVAWLHSDQTILSSCT---------DSGGVRLWDAR 176 (268)
Q Consensus 122 -----~d~~i~~~d~~~~~~~~-~~~~----------~~~~~v~~~~~~~~~~~~~~~~~---------~d~~i~iwd~~ 176 (268)
..+.+.+.|........ ..+. ........+++++++..++++.. ..+.|.+.|+.
T Consensus 279 ~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~ 358 (426)
T 3c75_H 279 LVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAE 358 (426)
T ss_dssp EEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETT
T ss_pred EEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECC
Confidence 23333444432111000 0000 00001112567777777766643 13589999999
Q ss_pred CCceEEeecCCCCEEEEEECCCCc-EEEEe--CCCeEEEEeCCCceeeeEE
Q 024372 177 SGKIVQTLETKSPVTSAEVSRDGR-YITTA--DGSSVKFWDANHFGLVKGY 224 (268)
Q Consensus 177 ~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~--~~~~v~~wd~~~~~~~~~~ 224 (268)
+.+.+.++........++|+|||+ ++.+. .++.|.++|+.+++.++++
T Consensus 359 T~kvv~~I~vg~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 359 TGERINKIELGHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp TCCEEEEEEEEEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred CCeEEEEEECCCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 999999987655688999999998 66554 3789999999999998886
No 220
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.28 E-value=1.9e-09 Score=98.86 Aligned_cols=235 Identities=13% Similarity=0.096 Sum_probs=151.4
Q ss_pred CcEEEEEeCCCCeEEeeCCCCCeEEEeeC--ccCcEEEEEecC---CCcEEEEee-----CCCcEEEEeCCCCCeeeeec
Q 024372 31 GFFLVSASKDSSPMLRNGETGDWIGTFEG--HKGAVWSCCLDA---NALFSASGS-----ADFTAKLWDALTGDEKHSFE 100 (268)
Q Consensus 31 g~~l~s~s~d~~i~iw~~~~~~~~~~~~~--h~~~V~~~~~~~---~~~~l~s~s-----~D~~v~iw~~~~~~~~~~~~ 100 (268)
+..++.++.|+.+..+|..+|+.+-++.. +......+..+| ++..++..+ .++.|+.||..+++.+-.+.
T Consensus 121 ~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 121 KGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence 45788899999999999999997755543 111111111122 455544332 37899999999999876653
Q ss_pred cC--C------------------------------eEEEEEECCCCCEEEEeeCCCe-------------------EEEE
Q 024372 101 HK--H------------------------------IVRACAFSEDTHLLLTGGFEKI-------------------LRIF 129 (268)
Q Consensus 101 ~~--~------------------------------~v~~v~~~~~~~~l~s~~~d~~-------------------i~~~ 129 (268)
.. . ....++++|+..+++.+..++. |..+
T Consensus 201 ~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~Al 280 (689)
T 1yiq_A 201 TVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAV 280 (689)
T ss_dssp SSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEE
T ss_pred ccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEE
Confidence 10 0 0124678888888888887753 8899
Q ss_pred ECCCCCCCCeEecC-Cc-------ccEEEEEEeCCCC--cEEEEeeCCCeEEEEeCCCCceEEeecCCC-----------
Q 024372 130 DLNRPDAPPREVGN-SS-------GSIRTVAWLHSDQ--TILSSCTDSGGVRLWDARSGKIVQTLETKS----------- 188 (268)
Q Consensus 130 d~~~~~~~~~~~~~-~~-------~~v~~~~~~~~~~--~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~----------- 188 (268)
|..+++........ +. .+........++. .+++.++.+|.++++|.++|+.+...+...
T Consensus 281 D~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~ 360 (689)
T 1yiq_A 281 NADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKT 360 (689)
T ss_dssp ETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTT
T ss_pred EccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccC
Confidence 99887654443321 21 1111111111222 256667788999999999999874322110
Q ss_pred -----------------------------CEEEEEECCCCcEEEEe-C--------------------------------
Q 024372 189 -----------------------------PVTSAEVSRDGRYITTA-D-------------------------------- 206 (268)
Q Consensus 189 -----------------------------~v~~~~~s~~g~~l~~~-~-------------------------------- 206 (268)
....++++|+..++... .
T Consensus 361 ~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p 440 (689)
T 1yiq_A 361 GRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMP 440 (689)
T ss_dssp TEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCC
T ss_pred CCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccC
Confidence 12236788876655432 1
Q ss_pred -------------CCeEEEEeCCCceeeeEEeCCCCceeeEEcCCCCCEEEeccCCCeEEEEECCCCcEEeec
Q 024372 207 -------------GSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIAIT 266 (268)
Q Consensus 207 -------------~~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~d~~i~~wd~~~g~~~~~~ 266 (268)
++.|+.||+.+++.+-.+..........+.. .+.++++|+.|+.++.||.++|+++-.+
T Consensus 441 ~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~t-agglvf~gt~dg~l~a~D~~tG~~lw~~ 512 (689)
T 1yiq_A 441 EGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIFNGGTLST-AGNLVFEGSADGRVIAYAADTGEKLWEQ 512 (689)
T ss_dssp SSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSCCCCEEEE-TTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred cccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCccCccceE-CCCEEEEECCCCcEEEEECCCCccceee
Confidence 2679999999998887776655444444444 4678888999999999999999998543
No 221
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.25 E-value=3.5e-10 Score=95.76 Aligned_cols=218 Identities=13% Similarity=-0.042 Sum_probs=135.6
Q ss_pred EEeeecCCCeeeEEEecCCCCCcEEEEEe----------CCCCeEEeeCCCCCeEEEeeCcc-------CcEEEEEecCC
Q 024372 10 LVCHGHSRPVVDLFYSPITPDGFFLVSAS----------KDSSPMLRNGETGDWIGTFEGHK-------GAVWSCCLDAN 72 (268)
Q Consensus 10 ~~~~~h~~~v~~~~f~~~~~dg~~l~s~s----------~d~~i~iw~~~~~~~~~~~~~h~-------~~V~~~~~~~~ 72 (268)
..+..-..| .+.|+| ||++|..+. .+++|.+||..+++.++++.-+. ..-..++++||
T Consensus 60 ~~i~vG~~P--~i~~sp---Dg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpD 134 (368)
T 1mda_H 60 GHSLGAFLS--LAVAGH---SGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCAS 134 (368)
T ss_dssp EEEEECTTC--EEEECT---TSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTT
T ss_pred EEEeCCCCC--ceEECC---CCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCC
Confidence 334333345 689985 898898886 47889999999999999986331 22456789999
Q ss_pred CcEEEEeeC--CCcEEE--EeCCCCCeeeeeccCCe-----E---EEEEECCCC--------------------------
Q 024372 73 ALFSASGSA--DFTAKL--WDALTGDEKHSFEHKHI-----V---RACAFSEDT-------------------------- 114 (268)
Q Consensus 73 ~~~l~s~s~--D~~v~i--w~~~~~~~~~~~~~~~~-----v---~~v~~~~~~-------------------------- 114 (268)
+++++.+.. +..+.+ +|..+ ...+..+.. . ..+.+++++
T Consensus 135 Gk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~ 211 (368)
T 1mda_H 135 SACLLFFLFGSSAAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQN 211 (368)
T ss_dssp SSCEEEEECSSSCEEEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSC
T ss_pred CCEEEEEccCCCCeEEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeee
Confidence 998877664 467888 99866 222211100 0 001122222
Q ss_pred -----------CEEEEeeCCCeEEEEECCCCCCCC-eEecC------Ccc----cEEEEEEeCCCCcEEEEee---C---
Q 024372 115 -----------HLLLTGGFEKILRIFDLNRPDAPP-REVGN------SSG----SIRTVAWLHSDQTILSSCT---D--- 166 (268)
Q Consensus 115 -----------~~l~s~~~d~~i~~~d~~~~~~~~-~~~~~------~~~----~v~~~~~~~~~~~~~~~~~---~--- 166 (268)
..++..+. +.+.+.|........ ..+.. ..+ ....+.+.+++..++++.. .
T Consensus 212 vg~~P~~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~ 290 (368)
T 1mda_H 212 CSSQAAQANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCL 290 (368)
T ss_dssp BCSCCEEETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTT
T ss_pred CCCCccccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCccc
Confidence 22222223 455555553211000 00000 000 0111567888887776544 2
Q ss_pred --CCeEEEEeCCCCceEEeecCCCCEEEEEECCCCc-EEEE-e-CCCeEEEEeCCCceeeeEEeCCCCceeeEEc
Q 024372 167 --SGGVRLWDARSGKIVQTLETKSPVTSAEVSRDGR-YITT-A-DGSSVKFWDANHFGLVKGYNMPCNTESASLE 236 (268)
Q Consensus 167 --d~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~-~-~~~~v~~wd~~~~~~~~~~~~~~~~~~~~~~ 236 (268)
++.+.++|+.+++.+.++........++++|||+ ++++ . .++.|.++|+.+++.++++.....+..+.+.
T Consensus 291 ~~~~~~~ViD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~~P~~i~~~ 365 (368)
T 1mda_H 291 AAAENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKGPESLSVQ 365 (368)
T ss_dssp SCEEEEEEEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCSCCCEEECC
T ss_pred ccCCCEEEEECCCCeEEEEEECCCCcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECCCCCCEEEee
Confidence 2356699999999999887655688999999997 3444 4 4799999999999999988876666655554
No 222
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.23 E-value=1.9e-09 Score=99.02 Aligned_cols=199 Identities=14% Similarity=0.068 Sum_probs=123.9
Q ss_pred CccCcEEEEEecCCCcEEEE-----eeCCCcEEEEeCCCCCeeeeeccCCeEEEEEECCCCCEEEEeeCCC---------
Q 024372 59 GHKGAVWSCCLDANALFSAS-----GSADFTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFEK--------- 124 (268)
Q Consensus 59 ~h~~~V~~~~~~~~~~~l~s-----~s~D~~v~iw~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~s~~~d~--------- 124 (268)
+|...+..++|+||++++|- |+.+.+|++||+.+++.+...........++|+ |++.|+.++.+.
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~ 204 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSAR 204 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCCC-------
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecCccccccccc
Confidence 45667888999999998873 334468999999998865432111112467899 999998888774
Q ss_pred ----eEEEEECCCCCCCCeEecC----CcccEEEEEEeCCCCcEEEEeeCC---CeEEEEeCCCCc-eEEeec-CCCCEE
Q 024372 125 ----ILRIFDLNRPDAPPREVGN----SSGSIRTVAWLHSDQTILSSCTDS---GGVRLWDARSGK-IVQTLE-TKSPVT 191 (268)
Q Consensus 125 ----~i~~~d~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~~~d---~~i~iwd~~~~~-~~~~~~-~~~~v~ 191 (268)
.|++|++.++......... +......+.++|++..++++...+ +.|+++|+.+++ ....+. ......
T Consensus 205 ~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~ 284 (693)
T 3iuj_A 205 TDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADV 284 (693)
T ss_dssp CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCE
T ss_pred CCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceE
Confidence 3899998765432222222 222467788999998876665432 589999998763 333343 223333
Q ss_pred EEEECCCCcE-EEEeC----CCeEEEEeCCCcee--eeEEeCCCCceeeEEcCCCCCEEEecc-CCC--eEEEEECCCCc
Q 024372 192 SAEVSRDGRY-ITTAD----GSSVKFWDANHFGL--VKGYNMPCNTESASLEPKLGNIFIAGG-EDM--WVHVFDFHTGE 261 (268)
Q Consensus 192 ~~~~s~~g~~-l~~~~----~~~v~~wd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~gs-~d~--~i~~wd~~~g~ 261 (268)
.. ++++|.. ++.++ ...|..+|+.+... .+.+........ .+++ +++.|+... .|+ .|++||...++
T Consensus 285 ~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~-~~s~-~g~~lv~~~~~~g~~~l~~~d~~g~~ 361 (693)
T 3iuj_A 285 SL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL-TVHS-GSGYLFAEYMVDATARVEQFDYEGKR 361 (693)
T ss_dssp EE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE-EEEE-ETTEEEEEEEETTEEEEEEECTTSCE
T ss_pred EE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE-EEEE-ECCEEEEEEEECCeeEEEEEECCCCe
Confidence 33 6666554 44443 25799999977543 233322222222 6666 466666554 454 68999987544
No 223
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.22 E-value=3.8e-12 Score=108.24 Aligned_cols=188 Identities=13% Similarity=0.034 Sum_probs=99.3
Q ss_pred CCcEEEEeeCCCcEEEEeCCCCCeeeeeccCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEE
Q 024372 72 NALFSASGSADFTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTV 151 (268)
Q Consensus 72 ~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~ 151 (268)
++..+++++.|+.|+.||..+++.+..+.. ..+.+..+..++.++++++.|+.++.||..+++............+.+.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~s 86 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE-DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQAS 86 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC-CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC-CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccC
Confidence 466788899999999999999999887765 4454444556777888888999999999876654322111100011000
Q ss_pred EEeCCCCcEEEEeeCCCeEEEEeCCCCceEEeecCCCCEEEEEECCCCcEE-EEeCCCeEEEEeCCCceeeeEEeCCCCc
Q 024372 152 AWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYI-TTADGSSVKFWDANHFGLVKGYNMPCNT 230 (268)
Q Consensus 152 ~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~g~~l-~~~~~~~v~~wd~~~~~~~~~~~~~~~~ 230 (268)
-....++. +.+++.++.|+.||.++|+.+..+..... ..++|++..+ +++.++.|+.||.++++.+..+.... .
T Consensus 87 p~~~~~~~-v~~g~~dg~v~a~D~~tG~~~w~~~~~~~---~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~-~ 161 (369)
T 2hz6_A 87 PCRSSDGI-LYMGKKQDIWYVIDLLTGEKQQTLSSAFA---DSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFD-Y 161 (369)
T ss_dssp SCC------CCCCEEEEEEEEECCC-------------------------EEEEEEEEEEECCCSSSSSCCCEEEEEE-E
T ss_pred ceEecCCE-EEEEeCCCEEEEEECCCCcEEEEecCCCc---ccccccCCEEEEEecCCEEEEEECCCCCEEEeEeccc-c
Confidence 00012333 34455668999999999999887765432 3445666555 45567899999998887665554321 1
Q ss_pred eeeEEcCC--CCCEEEeccCCCeEEEEECCCCcEEee
Q 024372 231 ESASLEPK--LGNIFIAGGEDMWVHVFDFHTGEQIAI 265 (268)
Q Consensus 231 ~~~~~~~~--~~~~~~~gs~d~~i~~wd~~~g~~~~~ 265 (268)
....+..+ .+..+++++.|+.|+.||.++|+++-.
T Consensus 162 ~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~ 198 (369)
T 2hz6_A 162 AASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWI 198 (369)
T ss_dssp CCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEE
T ss_pred cCccccCCccccceEEEECCCCEEEEEECCCCcEEEE
Confidence 11112211 114567788899999999999987643
No 224
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.21 E-value=2.3e-08 Score=82.00 Aligned_cols=198 Identities=10% Similarity=0.049 Sum_probs=124.7
Q ss_pred cEEEEEecCC-CcEEEEeeCCCcEEEEeCCCCCeeeeeccCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEe
Q 024372 63 AVWSCCLDAN-ALFSASGSADFTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREV 141 (268)
Q Consensus 63 ~V~~~~~~~~-~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~ 141 (268)
--....|+++ +.++++...++.|..||..++.. ..+.....+.++.++++++++++ . ++.|.+||..+++......
T Consensus 14 ~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~~~~ 90 (297)
T 3g4e_A 14 CGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVTMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVVLAT 90 (297)
T ss_dssp BEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEEEEE
T ss_pred cccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEeCCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEEEEe
Confidence 3445667875 45667777889999999987665 44556678999999999996654 3 5678999986543211111
Q ss_pred c---CCcccEEEEEEeCCCCcEEEEeeC----------CCeEEEEeCCCCceEEeecCCCCEEEEEECCCCcEEE-Ee-C
Q 024372 142 G---NSSGSIRTVAWLHSDQTILSSCTD----------SGGVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYIT-TA-D 206 (268)
Q Consensus 142 ~---~~~~~v~~~~~~~~~~~~~~~~~~----------d~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~g~~l~-~~-~ 206 (268)
. .....++.+++.+++..++.+... .+.|..+|.. ++...........+.++|+|+++.+. +. .
T Consensus 91 ~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~~~~~~~~pngi~~spdg~~lyv~~~~ 169 (297)
T 3g4e_A 91 VDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVKKYFDQVDISNGLDWSLDHKIFYYIDSL 169 (297)
T ss_dssp CCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEEEEEEEESBEEEEEECTTSCEEEEEEGG
T ss_pred cCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEEEEeeccccccceEEcCCCCEEEEecCC
Confidence 1 112346778888877644433221 1234444443 44333333334578999999998654 33 4
Q ss_pred CCeEEEEeCC--Cceee--eEE-eCC---CCceeeEEcCCCCCEEEeccCCCeEEEEECCCCcEEee
Q 024372 207 GSSVKFWDAN--HFGLV--KGY-NMP---CNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIAI 265 (268)
Q Consensus 207 ~~~v~~wd~~--~~~~~--~~~-~~~---~~~~~~~~~~~~~~~~~~gs~d~~i~~wd~~~g~~~~~ 265 (268)
++.|..||+. ++... +.+ ... ..+..+++.+ +|.+.++...++.|.+||.++|+.+..
T Consensus 170 ~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~-~G~lwva~~~~~~v~~~d~~tG~~~~~ 235 (297)
T 3g4e_A 170 SYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDA-EGKLWVACYNGGRVIRLDPVTGKRLQT 235 (297)
T ss_dssp GTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBT-TSCEEEEEETTTEEEEECTTTCCEEEE
T ss_pred CCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECC-CCCEEEEEcCCCEEEEEcCCCceEEEE
Confidence 6789999873 33321 112 111 2244556666 588888877788899999988987655
No 225
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.17 E-value=2.9e-08 Score=85.17 Aligned_cols=216 Identities=12% Similarity=0.113 Sum_probs=140.6
Q ss_pred CCCcEEEE-EeCCCCeEEeeCCCC----CeEEEee------C-ccCcEEEEEecCCCcEEEEeeCC------CcEEEEeC
Q 024372 29 PDGFFLVS-ASKDSSPMLRNGETG----DWIGTFE------G-HKGAVWSCCLDANALFSASGSAD------FTAKLWDA 90 (268)
Q Consensus 29 ~dg~~l~s-~s~d~~i~iw~~~~~----~~~~~~~------~-h~~~V~~~~~~~~~~~l~s~s~D------~~v~iw~~ 90 (268)
.++++|+. +..+..|.|.|+.+. +.+++++ . -...-..+...|++ +++++..+ +.+.+.|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 45666654 666778999998765 5667663 0 11133556778999 66665555 78999999
Q ss_pred CCCCeeeeeccC-C---eEEEEEECCCCCEEEEee-------------------CCCeEEEEECCCCCCCCeEecC--Cc
Q 024372 91 LTGDEKHSFEHK-H---IVRACAFSEDTHLLLTGG-------------------FEKILRIFDLNRPDAPPREVGN--SS 145 (268)
Q Consensus 91 ~~~~~~~~~~~~-~---~v~~v~~~~~~~~l~s~~-------------------~d~~i~~~d~~~~~~~~~~~~~--~~ 145 (268)
.+.+.+..++.. . .-..+.|+|+++.+++.. ....|.+||+.+.+. .+.+.- ..
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~-~~tI~vg~~g 250 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKR-IHSLTLGEEN 250 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEE-EEEEESCTTE
T ss_pred CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcE-eeEEecCCCC
Confidence 999998888633 1 233578899999999885 378999999976432 233322 11
Q ss_pred ccEEEEEE--eCCCCcEEEEee-----CCCeEEEEeCCCCc--eEEee--cC-----------------CCCEEEEEECC
Q 024372 146 GSIRTVAW--LHSDQTILSSCT-----DSGGVRLWDARSGK--IVQTL--ET-----------------KSPVTSAEVSR 197 (268)
Q Consensus 146 ~~v~~~~~--~~~~~~~~~~~~-----~d~~i~iwd~~~~~--~~~~~--~~-----------------~~~v~~~~~s~ 197 (268)
.....+.| +|++...++++- .+++|.+|....++ ..+.+ .. ......+.+||
T Consensus 251 ~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~ 330 (462)
T 2ece_A 251 RMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISL 330 (462)
T ss_dssp EEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECT
T ss_pred CccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECC
Confidence 23345555 788888777776 67888876654442 11211 10 13367899999
Q ss_pred CCcEEEEe--CCCeEEEEeCCC---ceeeeEEeCC---------------CCceeeEEcCCCCCEEEecc
Q 024372 198 DGRYITTA--DGSSVKFWDANH---FGLVKGYNMP---------------CNTESASLEPKLGNIFIAGG 247 (268)
Q Consensus 198 ~g~~l~~~--~~~~v~~wd~~~---~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~gs 247 (268)
||++|-.+ ..+.|.++|+.. .+.+...... ..+..+.+++ +|++++++.
T Consensus 331 DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSp-DGk~LyVaN 399 (462)
T 2ece_A 331 DDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISR-DGRRVYVTN 399 (462)
T ss_dssp TSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECT-TSSEEEEEC
T ss_pred CCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcC-CCCEEEEEc
Confidence 99998665 357999999852 3445444432 1356677777 577776665
No 226
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.16 E-value=1.3e-08 Score=85.29 Aligned_cols=227 Identities=12% Similarity=0.059 Sum_probs=141.1
Q ss_pred CCeeeEEEecCCCCCcEEEEEeC--CCCeEEeeCCCCCeEEEe-------eCccCcEEEEEecCCCcEEEEeeC-----C
Q 024372 17 RPVVDLFYSPITPDGFFLVSASK--DSSPMLRNGETGDWIGTF-------EGHKGAVWSCCLDANALFSASGSA-----D 82 (268)
Q Consensus 17 ~~v~~~~f~~~~~dg~~l~s~s~--d~~i~iw~~~~~~~~~~~-------~~h~~~V~~~~~~~~~~~l~s~s~-----D 82 (268)
.....++++| +|+++++... ++.++||.+.++++. .+ .+|...+..+++++++.+++.-.. +
T Consensus 17 ~~p~~va~~~---~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~ 92 (343)
T 2qe8_A 17 LAPGNITLTP---DGRLFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSV 92 (343)
T ss_dssp SCEEEEEECT---TSCEEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSC
T ss_pred CCcceEEECC---CCCEEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCC
Confidence 5778999984 8988888642 343566655456543 22 235578999999999877665433 6
Q ss_pred CcEEEEeCCCCCeeeeecc-------CCeEEEEEECCCC-CEEEEee---CCCeEEEEECCCCCCCCeEecCC-------
Q 024372 83 FTAKLWDALTGDEKHSFEH-------KHIVRACAFSEDT-HLLLTGG---FEKILRIFDLNRPDAPPREVGNS------- 144 (268)
Q Consensus 83 ~~v~iw~~~~~~~~~~~~~-------~~~v~~v~~~~~~-~~l~s~~---~d~~i~~~d~~~~~~~~~~~~~~------- 144 (268)
+.|.+||+.+++....+.. ...+..+.+++++ ...++-. .++.|.+||+.+++. .+....|
T Consensus 93 ~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~-~r~~~~~~~~~~~~ 171 (343)
T 2qe8_A 93 PKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLA-ARVLQGYPGIAPED 171 (343)
T ss_dssp CEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCE-EEECTTCTTTSCCS
T ss_pred CeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCE-EEEecCCCcccccc
Confidence 7899999998886665542 1346788999854 4445544 678999999864421 1111110
Q ss_pred ----------------------cccEEEEEEeCCCCcEEEEeeCCCeEEEEeCC---CCc--------eEEeecCCCCEE
Q 024372 145 ----------------------SGSIRTVAWLHSDQTILSSCTDSGGVRLWDAR---SGK--------IVQTLETKSPVT 191 (268)
Q Consensus 145 ----------------------~~~v~~~~~~~~~~~~~~~~~~d~~i~iwd~~---~~~--------~~~~~~~~~~v~ 191 (268)
......++++|++..++.+....+.|..++.. .+. .+..+.......
T Consensus 172 ~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pd 251 (343)
T 2qe8_A 172 IDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICD 251 (343)
T ss_dssp CCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCS
T ss_pred cceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCc
Confidence 01357789999887776665554455555532 111 011111223456
Q ss_pred EEEECCCCcEEEEe-CCCeEEEEeCCCceeeeEEeCC--CCceeeEEcCCCCCEEEeccCC
Q 024372 192 SAEVSRDGRYITTA-DGSSVKFWDANHFGLVKGYNMP--CNTESASLEPKLGNIFIAGGED 249 (268)
Q Consensus 192 ~~~~s~~g~~l~~~-~~~~v~~wd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~gs~d 249 (268)
.++++++|+++++. .++.|.+||..+++.......+ ..+..+++.+ +++++++.+..
T Consensus 252 gia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~-~g~l~v~~~~~ 311 (343)
T 2qe8_A 252 GISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGS-DGYLYFDCNQL 311 (343)
T ss_dssp CEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECT-TSCEEEEECCG
T ss_pred eEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECC-CCcEEEEeCcc
Confidence 78999999887765 5689999998444432222222 2345666666 58888876643
No 227
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.16 E-value=1.6e-08 Score=85.61 Aligned_cols=225 Identities=13% Similarity=0.065 Sum_probs=140.3
Q ss_pred CcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCCCcEEEEeCCCCCeeeeeccCCeEEEEE-
Q 024372 31 GFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEKHSFEHKHIVRACA- 109 (268)
Q Consensus 31 g~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~v~~v~- 109 (268)
+..+..++.++.+..+|..+|+.+-.+............. + ..++.++.++.+..+|..+++.+.......++....
T Consensus 103 ~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~-~-~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~ 180 (376)
T 3q7m_A 103 GGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVS-D-GLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRG 180 (376)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEEE-T-TEEEEECTTSEEEEEETTTCCEEEEEECCC-----CC
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEEE-C-CEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecC
Confidence 4477789999999999999998775554332211111222 3 356667789999999999999877765433321000
Q ss_pred -ECC--CCCEEEEeeCCCeEEEEECCCCCCCCeEecCC-ccc--------E-EEEEEeCCCCcEEEEeeCCCeEEEEeCC
Q 024372 110 -FSE--DTHLLLTGGFEKILRIFDLNRPDAPPREVGNS-SGS--------I-RTVAWLHSDQTILSSCTDSGGVRLWDAR 176 (268)
Q Consensus 110 -~~~--~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~-~~~--------v-~~~~~~~~~~~~~~~~~~d~~i~iwd~~ 176 (268)
..| .+..++.+..++.+..+|..+++...+..... .+. + ..... .++.+++ ++.++.+..+|.+
T Consensus 181 ~~~~~~~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~v~~-~~~~g~l~~~d~~ 257 (376)
T 3q7m_A 181 ESAPTTAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVV--VNGVVFA-LAYNGNLTALDLR 257 (376)
T ss_dssp CCCCEEETTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEE--ETTEEEE-ECTTSCEEEEETT
T ss_pred CCCcEEECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEE--ECCEEEE-EecCcEEEEEECC
Confidence 011 13467778889999999987665432222110 000 0 00011 1334444 4556899999999
Q ss_pred CCceEEeecCCCCEEEEEECCCCcEEEEeCCCeEEEEeCCCceeeeEEeC-CCCc-eeeEEcCCCCCEEEeccCCCeEEE
Q 024372 177 SGKIVQTLETKSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGYNM-PCNT-ESASLEPKLGNIFIAGGEDMWVHV 254 (268)
Q Consensus 177 ~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~v~~wd~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~gs~d~~i~~ 254 (268)
+++.+...... ....+... ++++++++.++.|..+|..+++.+..+.. .... ..... .+..++.++.++.+++
T Consensus 258 tG~~~w~~~~~-~~~~~~~~-~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~---~~~~l~v~~~~g~l~~ 332 (376)
T 3q7m_A 258 SGQIMWKRELG-SVNDFIVD-GNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL---YNGNLVVGDSEGYLHW 332 (376)
T ss_dssp TCCEEEEECCC-CEEEEEEE-TTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE---ETTEEEEECTTSEEEE
T ss_pred CCcEEeeccCC-CCCCceEE-CCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE---ECCEEEEEeCCCeEEE
Confidence 99988776543 23444443 55666677788999999998887665552 2111 12222 2567888888999999
Q ss_pred EECCCCcEEee
Q 024372 255 FDFHTGEQIAI 265 (268)
Q Consensus 255 wd~~~g~~~~~ 265 (268)
+|.++|+.+..
T Consensus 333 ~d~~tG~~~~~ 343 (376)
T 3q7m_A 333 INVEDGRFVAQ 343 (376)
T ss_dssp EETTTCCEEEE
T ss_pred EECCCCcEEEE
Confidence 99999998754
No 228
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.15 E-value=1.3e-08 Score=86.20 Aligned_cols=222 Identities=9% Similarity=-0.014 Sum_probs=138.4
Q ss_pred CcEEEEEeCCCCeEEeeCCCCCeEEEeeCc---------cCcEE-EEEecCCCcEEEEeeCCCcEEEEeCCCCCeeeeec
Q 024372 31 GFFLVSASKDSSPMLRNGETGDWIGTFEGH---------KGAVW-SCCLDANALFSASGSADFTAKLWDALTGDEKHSFE 100 (268)
Q Consensus 31 g~~l~s~s~d~~i~iw~~~~~~~~~~~~~h---------~~~V~-~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~ 100 (268)
+..+..++.++.+..+|..+|+.+-++... ...+. .... ++..+..++.++.|..+|..+++.+....
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~~g~l~a~d~~tG~~~W~~~ 130 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTV--SGGHVYIGSEKAQVYALNTSDGTVAWQTK 130 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceE--eCCEEEEEcCCCEEEEEECCCCCEEEEEe
Confidence 457888899999999999999876444432 12222 2222 34456667789999999999999876665
Q ss_pred cCCeEEE-EEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEecCCcccE------EEEEEeCCCCcEEEEeeCCCeEEEE
Q 024372 101 HKHIVRA-CAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSI------RTVAWLHSDQTILSSCTDSGGVRLW 173 (268)
Q Consensus 101 ~~~~v~~-v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v------~~~~~~~~~~~~~~~~~~d~~i~iw 173 (268)
....+.. ... .+..++.++.++.+..+|..+++...+.... ..+ ...... ++. +..++.++.|..+
T Consensus 131 ~~~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~--~~~~~~~~~~~~~~~--~~~-v~~g~~~g~l~~~ 203 (376)
T 3q7m_A 131 VAGEALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLD--MPSLSLRGESAPTTA--FGA-AVVGGDNGRVSAV 203 (376)
T ss_dssp CSSCCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECC--C-----CCCCCCEEE--TTE-EEECCTTTEEEEE
T ss_pred CCCceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCC--CCceeecCCCCcEEE--CCE-EEEEcCCCEEEEE
Confidence 4332211 111 1346777888999999998776543332211 111 111111 233 4445667899999
Q ss_pred eCCCCceEEeecCCCCE-----E---EEEEC---CCCcEEEEeCCCeEEEEeCCCceeeeEEeCCCCceeeEEcCCCCCE
Q 024372 174 DARSGKIVQTLETKSPV-----T---SAEVS---RDGRYITTADGSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNI 242 (268)
Q Consensus 174 d~~~~~~~~~~~~~~~v-----~---~~~~s---~~g~~l~~~~~~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (268)
|.++++.+.......+. . .+... .++.+++++.++.+..+|.++++.+..+.... ...... .+..
T Consensus 204 d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~~-~~~~~~---~~~~ 279 (376)
T 3q7m_A 204 LMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGS-VNDFIV---DGNR 279 (376)
T ss_dssp ETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECCCC-EEEEEE---ETTE
T ss_pred ECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccCCC-CCCceE---ECCE
Confidence 99999988766532110 0 01111 24556666678899999999888776555432 122222 3566
Q ss_pred EEeccCCCeEEEEECCCCcEEee
Q 024372 243 FIAGGEDMWVHVFDFHTGEQIAI 265 (268)
Q Consensus 243 ~~~gs~d~~i~~wd~~~g~~~~~ 265 (268)
++.++.++.|+.+|.++|+.+-.
T Consensus 280 l~~~~~~g~l~~~d~~tG~~~w~ 302 (376)
T 3q7m_A 280 IYLVDQNDRVMALTIDGGVTLWT 302 (376)
T ss_dssp EEEEETTCCEEEEETTTCCEEEE
T ss_pred EEEEcCCCeEEEEECCCCcEEEe
Confidence 77777888999999999987643
No 229
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.15 E-value=1.2e-08 Score=90.35 Aligned_cols=240 Identities=10% Similarity=0.057 Sum_probs=160.9
Q ss_pred eEEEecCCCCCcEEEEEeCCC-CeEEeeCCCCCeEEEeeCc-cCcEEEEEe-c-CCCcEEEEee----------------
Q 024372 21 DLFYSPITPDGFFLVSASKDS-SPMLRNGETGDWIGTFEGH-KGAVWSCCL-D-ANALFSASGS---------------- 80 (268)
Q Consensus 21 ~~~f~~~~~dg~~l~s~s~d~-~i~iw~~~~~~~~~~~~~h-~~~V~~~~~-~-~~~~~l~s~s---------------- 80 (268)
.+++-.-.+||++|.....+. .|.+-|..+.++.+.+.-- ......+++ + |++.++..++
T Consensus 91 ~~s~t~g~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~ 170 (595)
T 1fwx_A 91 HMSFTEGKYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDV 170 (595)
T ss_dssp EEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCG
T ss_pred ccCCCCCCcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccc
Confidence 555544446888888877655 4788899999988744321 234667777 5 8888876663
Q ss_pred --CCCcEEEEeCCCCCeeeeeccCCeEEEEEECCCCCEEEEeeCCC----------------------------------
Q 024372 81 --ADFTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFEK---------------------------------- 124 (268)
Q Consensus 81 --~D~~v~iw~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~s~~~d~---------------------------------- 124 (268)
.++.+-+.|..+.+....+.....-..+.++|+++++++.+.+.
T Consensus 171 ~~~~~~vtvID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~ 250 (595)
T 1fwx_A 171 ANYVNVFTAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDY 250 (595)
T ss_dssp GGEEEEEEEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCS
T ss_pred cccCceEEEEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCe
Confidence 34578899999988888776533445677899999999888654
Q ss_pred ----eEEEEECCC--CCCCCeEecCCcccEEEEEEeCCCCcEEEEeeCCCeEEEEeCCCCc------------eEEeecC
Q 024372 125 ----ILRIFDLNR--PDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGK------------IVQTLET 186 (268)
Q Consensus 125 ----~i~~~d~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~------------~~~~~~~ 186 (268)
.+.+.|..+ +......+.-. ....++.++|++.++++++..+++|.++|+++.+ .+.+.+.
T Consensus 251 ~~i~~V~VID~~~~~~~~~~~~Ipvg-~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~v 329 (595)
T 1fwx_A 251 QELNGVKVVDGRKEASSLFTRYIPIA-NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPEL 329 (595)
T ss_dssp EEETTEEEEECSGGGCCSSEEEEEEE-SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBC
T ss_pred eEECcEEEEeCcccCCceeEEEEecC-CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCC
Confidence 255566554 22111222111 1234678899999999998888999999999763 4455665
Q ss_pred CCCEEEEEECCCCcEEEEe-CCCeEEEEeCCC----------ceeeeEEeCCCCc--e----eeEEcCCCCCEEEec---
Q 024372 187 KSPVTSAEVSRDGRYITTA-DGSSVKFWDANH----------FGLVKGYNMPCNT--E----SASLEPKLGNIFIAG--- 246 (268)
Q Consensus 187 ~~~v~~~~~s~~g~~l~~~-~~~~v~~wd~~~----------~~~~~~~~~~~~~--~----~~~~~~~~~~~~~~g--- 246 (268)
......++|+|+|...++. -+..|..||+.. ...+.+...+..+ . .....+ +|++|+++
T Consensus 330 G~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~-DGk~l~~~Nk~ 408 (595)
T 1fwx_A 330 GLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDA-TNDWLVCLSKF 408 (595)
T ss_dssp CSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTC-CSSEEEEEESC
T ss_pred CCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCC-CCCEEEEcCCC
Confidence 5668899999999433343 478999999876 4456666554322 1 112344 79988875
Q ss_pred cCCCeE----------EEEECCCCcE
Q 024372 247 GEDMWV----------HVFDFHTGEQ 262 (268)
Q Consensus 247 s~d~~i----------~~wd~~~g~~ 262 (268)
+.|+.+ .++|+..+++
T Consensus 409 skdr~~~~gp~~~~~~ql~dis~~~m 434 (595)
T 1fwx_A 409 SKDRFLNVGPLKPENDQLIDISGDKM 434 (595)
T ss_dssp CTTSSCCCCSSCCEEEEEEECSSSSC
T ss_pred CccccccCCCCCCCcceEEEcCCCcE
Confidence 447652 8899965553
No 230
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.13 E-value=1.7e-08 Score=84.58 Aligned_cols=199 Identities=11% Similarity=0.020 Sum_probs=126.6
Q ss_pred CcEEEEEecCCCcEEEEee--CCCcEEEEeCCCCCeeeeec--------cCCeEEEEEECCCCCEEEEeeC-----CCeE
Q 024372 62 GAVWSCCLDANALFSASGS--ADFTAKLWDALTGDEKHSFE--------HKHIVRACAFSEDTHLLLTGGF-----EKIL 126 (268)
Q Consensus 62 ~~V~~~~~~~~~~~l~s~s--~D~~v~iw~~~~~~~~~~~~--------~~~~v~~v~~~~~~~~l~s~~~-----d~~i 126 (268)
.....++++++++++++.. .++.++||.+.++. ...+. +-..+..+.+++++++.++-.. +..|
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~-~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDG-LIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTE-EEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCC-eecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 6788999999999888864 23436666654443 23221 2246889999999886665433 5789
Q ss_pred EEEECCCCCCCCeEecC------CcccEEEEEEeCCCCcEEEEee---CCCeEEEEeCCCCceEEeecCC----------
Q 024372 127 RIFDLNRPDAPPREVGN------SSGSIRTVAWLHSDQTILSSCT---DSGGVRLWDARSGKIVQTLETK---------- 187 (268)
Q Consensus 127 ~~~d~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~~~~~~~---~d~~i~iwd~~~~~~~~~~~~~---------- 187 (268)
..||+.+++.. ..... +......+++.++++.++++.. .++.|.+||+.+++..+.+..+
T Consensus 96 ~~~d~~tg~~~-~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~ 174 (343)
T 2qe8_A 96 VAWDTLNNQLS-RVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDL 174 (343)
T ss_dssp EEEETTTTEEE-EEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCC
T ss_pred EEEECCCCeEE-EEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccce
Confidence 99998765422 22211 1224567888876666666655 5689999999988776655321
Q ss_pred --------------------CCEEEEEECCCCcEEEEe--CCCeEEEEeCC---Cce--------eeeEEeCCCCceeeE
Q 024372 188 --------------------SPVTSAEVSRDGRYITTA--DGSSVKFWDAN---HFG--------LVKGYNMPCNTESAS 234 (268)
Q Consensus 188 --------------------~~v~~~~~s~~g~~l~~~--~~~~v~~wd~~---~~~--------~~~~~~~~~~~~~~~ 234 (268)
..++.++++|+|+.|..+ .+..+..++.. ... .+........+..++
T Consensus 175 ~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia 254 (343)
T 2qe8_A 175 VIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGIS 254 (343)
T ss_dssp EETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEE
T ss_pred eECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEE
Confidence 136889999999866543 33455555431 110 011111112344566
Q ss_pred EcCCCCCEEEeccCCCeEEEEECCCCcEE
Q 024372 235 LEPKLGNIFIAGGEDMWVHVFDFHTGEQI 263 (268)
Q Consensus 235 ~~~~~~~~~~~gs~d~~i~~wd~~~g~~~ 263 (268)
+.+ +|.++++...++.|.+||.++|+..
T Consensus 255 ~d~-~G~l~va~~~~~~V~~~d~~~G~~~ 282 (343)
T 2qe8_A 255 IDK-DHNIYVGDLAHSAIGVITSADRAYK 282 (343)
T ss_dssp ECT-TCCEEEEEGGGTEEEEEETTTTEEE
T ss_pred ECC-CCCEEEEccCCCeEEEEECCCCCEE
Confidence 666 5899999999999999998667643
No 231
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.11 E-value=1e-06 Score=70.87 Aligned_cols=201 Identities=5% Similarity=-0.059 Sum_probs=126.1
Q ss_pred CcEEEEEecCCCc-EEEEeeCCCcEEEEeCCCCCeeeeeccC-CeEEEEEECCCCCEE-EEeeCCCeEEEEECCCCCCCC
Q 024372 62 GAVWSCCLDANAL-FSASGSADFTAKLWDALTGDEKHSFEHK-HIVRACAFSEDTHLL-LTGGFEKILRIFDLNRPDAPP 138 (268)
Q Consensus 62 ~~V~~~~~~~~~~-~l~s~s~D~~v~iw~~~~~~~~~~~~~~-~~v~~v~~~~~~~~l-~s~~~d~~i~~~d~~~~~~~~ 138 (268)
.....+++++++. +.++-..++.|..++.........+... .....+++++++..+ ++-...+.|.++++.... ..
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~-~~ 114 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQ-RR 114 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CE
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCC-EE
Confidence 3567889998654 4556667789999998766544333222 456789999865544 454567889999986322 11
Q ss_pred eEecCCcccEEEEEEeCCCCcEEEEeeC--CCeEEEEeCCCCceEEee--cCCCCEEEEEECCCCcEE-EEe-CCCeEEE
Q 024372 139 REVGNSSGSIRTVAWLHSDQTILSSCTD--SGGVRLWDARSGKIVQTL--ETKSPVTSAEVSRDGRYI-TTA-DGSSVKF 212 (268)
Q Consensus 139 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~--d~~i~iwd~~~~~~~~~~--~~~~~v~~~~~s~~g~~l-~~~-~~~~v~~ 212 (268)
............+++.++++.++.+... .+.|..+++.... ...+ ........++++|++..| ++. ..+.|..
T Consensus 115 ~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~ 193 (267)
T 1npe_A 115 VLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAEC 193 (267)
T ss_dssp EEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEE
Confidence 1221111345788888877777666543 3688888876432 2222 122357899999987554 343 4578999
Q ss_pred EeCCCceeeeEEeCCCCceeeEEcCCCCCEEEeccCCCeEEEEECCCCcEEeec
Q 024372 213 WDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIAIT 266 (268)
Q Consensus 213 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~d~~i~~wd~~~g~~~~~~ 266 (268)
+|...............+..++.. .+.++++...++.|+++|..+|+.+...
T Consensus 194 ~~~~g~~~~~~~~~~~~P~gi~~d--~~~lyva~~~~~~v~~~d~~~g~~~~~i 245 (267)
T 1npe_A 194 LNPAQPGRRKVLEGLQYPFAVTSY--GKNLYYTDWKTNSVIAMDLAISKEMDTF 245 (267)
T ss_dssp EETTEEEEEEEEECCCSEEEEEEE--TTEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EecCCCceEEEecCCCCceEEEEe--CCEEEEEECCCCeEEEEeCCCCCceEEE
Confidence 998754333323322233344432 4666776667788999999989877653
No 232
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.10 E-value=8.1e-08 Score=79.93 Aligned_cols=193 Identities=13% Similarity=0.009 Sum_probs=119.7
Q ss_pred EEEEecCCC-cEEEEeeCCCcEEEEeCCCCCeeeeeccCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEec-
Q 024372 65 WSCCLDANA-LFSASGSADFTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVG- 142 (268)
Q Consensus 65 ~~~~~~~~~-~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~- 142 (268)
....|++++ .++++...++.|..||..++... .+.....+.++.++++++++++. . ..+.+||..+++.. ....
T Consensus 52 egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~~~~~v~~i~~~~dg~l~v~~-~-~gl~~~d~~~g~~~-~~~~~ 127 (326)
T 2ghs_A 52 EGPTFDPASGTAWWFNILERELHELHLASGRKT-VHALPFMGSALAKISDSKQLIAS-D-DGLFLRDTATGVLT-LHAEL 127 (326)
T ss_dssp EEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEECSSCEEEEEEEETTEEEEEE-T-TEEEEEETTTCCEE-EEECS
T ss_pred cCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEECCCcceEEEEeCCCeEEEEE-C-CCEEEEECCCCcEE-EEeeC
Confidence 446688874 55667777899999999876543 34456678999999999877754 3 45889998654421 1111
Q ss_pred ---CCcccEEEEEEeCCCCcEEEEeeC-----CCeEEEEeCCCCceEEeecCCCCEEEEEECCCCcEEE-Ee-CCCeEEE
Q 024372 143 ---NSSGSIRTVAWLHSDQTILSSCTD-----SGGVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYIT-TA-DGSSVKF 212 (268)
Q Consensus 143 ---~~~~~v~~~~~~~~~~~~~~~~~~-----d~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~g~~l~-~~-~~~~v~~ 212 (268)
.....+..+.+.+++..++.+... .+.|..+| +++...........+.++|+|+|+.+. +. .++.|.+
T Consensus 128 ~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~ 205 (326)
T 2ghs_A 128 ESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMR 205 (326)
T ss_dssp STTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEE
T ss_pred CCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEE
Confidence 112357788888877644433221 24566666 455433333334578999999998653 33 3578999
Q ss_pred EeCC--Cc-ee--eeEE-eCC---CCceeeEEcCCCCCEEEeccCCCeEEEEECCCCcEEee
Q 024372 213 WDAN--HF-GL--VKGY-NMP---CNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIAI 265 (268)
Q Consensus 213 wd~~--~~-~~--~~~~-~~~---~~~~~~~~~~~~~~~~~~gs~d~~i~~wd~~~g~~~~~ 265 (268)
||+. ++ .. .+.+ ... ..+..+.+.+ +|.++++...++.|++||. +|+.+..
T Consensus 206 ~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~-~G~lwva~~~~~~v~~~d~-~g~~~~~ 265 (326)
T 2ghs_A 206 VPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDA-EGHIWNARWGEGAVDRYDT-DGNHIAR 265 (326)
T ss_dssp EEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECT-TSCEEEEEETTTEEEEECT-TCCEEEE
T ss_pred EEcccccCCcccCceEEEECCCCCCCCCeeEECC-CCCEEEEEeCCCEEEEECC-CCCEEEE
Confidence 9985 33 21 1122 111 1233445555 5787777666778999998 5766543
No 233
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.09 E-value=3e-08 Score=81.60 Aligned_cols=193 Identities=10% Similarity=0.053 Sum_probs=122.1
Q ss_pred eeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCc-----cCcEEEEEecCCCcEEEE----eeC-
Q 024372 12 CHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGH-----KGAVWSCCLDANALFSAS----GSA- 81 (268)
Q Consensus 12 ~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h-----~~~V~~~~~~~~~~~l~s----~s~- 81 (268)
+..+...+.+++++| +|+++++...++.|..|+.. ++.. .+..+ ...+..+++.+++.+.+| |..
T Consensus 81 ~~~~~~~~~gl~~d~---dG~l~v~~~~~~~v~~~~~~-g~~~-~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~ 155 (305)
T 3dr2_A 81 LLDATAFTNGNAVDA---QQRLVHCEHGRRAITRSDAD-GQAH-LLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRK 155 (305)
T ss_dssp EEESCSCEEEEEECT---TSCEEEEETTTTEEEEECTT-SCEE-EEECEETTEECSCCCCEEECTTSCEEEECCSGGGSC
T ss_pred EeCCCCccceeeECC---CCCEEEEECCCCEEEEECCC-CCEE-EEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccc
Confidence 344566788999984 88877766666788889875 6543 23221 134567899999998886 332
Q ss_pred ------------CCcEEEEeCCCCCeeeeeccCCeEEEEEECCCCCEEEEeeCC------CeEEEEECCCCCCCC-eEe-
Q 024372 82 ------------DFTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFE------KILRIFDLNRPDAPP-REV- 141 (268)
Q Consensus 82 ------------D~~v~iw~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~s~~~d------~~i~~~d~~~~~~~~-~~~- 141 (268)
.+.|..+|..++...... .......++|+|+++.|+.+... +.|..|++....... ..+
T Consensus 156 ~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~ 234 (305)
T 3dr2_A 156 PSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFA 234 (305)
T ss_dssp GGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEE
T ss_pred cccccccccccCCCeEEEEcCCCCcEEEEe-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEE
Confidence 245777777666654433 33456789999999988777655 689999976432100 011
Q ss_pred cCCcccEEEEEEeCCCCcEEEEeeCCCeEEEEeCCCCceEEeecCCCCEEEEEECCCCcEEEEeCCCeEEEEe
Q 024372 142 GNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYITTADGSSVKFWD 214 (268)
Q Consensus 142 ~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~v~~wd 214 (268)
....+....+++.+++. +.++. . +.|.+||. .++.+..+.....+.+++|+|+++.|..+..+.+..++
T Consensus 235 ~~~~~~pdgi~~d~~G~-lwv~~-~-~gv~~~~~-~g~~~~~~~~~~~~~~~~f~~d~~~L~it~~~~l~~~~ 303 (305)
T 3dr2_A 235 SVPDGLPDGFCVDRGGW-LWSSS-G-TGVCVFDS-DGQLLGHIPTPGTASNCTFDQAQQRLFITGGPCLWMLP 303 (305)
T ss_dssp CCSSSCCCSEEECTTSC-EEECC-S-SEEEEECT-TSCEEEEEECSSCCCEEEECTTSCEEEEEETTEEEEEE
T ss_pred ECCCCCCCeEEECCCCC-EEEec-C-CcEEEECC-CCCEEEEEECCCceeEEEEeCCCCEEEEEcCCeEEEEE
Confidence 11122334566666654 54443 4 46999998 47777776654568889999998766544334444333
No 234
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.07 E-value=1.4e-07 Score=75.89 Aligned_cols=202 Identities=11% Similarity=0.059 Sum_probs=136.8
Q ss_pred CCeEEEeeCcc--CcEEEEEecCCCcEEEEeeC--CCcEEEEeCCCCCeeeeeccCC--eEEEEEECCCCCEEE-EeeCC
Q 024372 51 GDWIGTFEGHK--GAVWSCCLDANALFSASGSA--DFTAKLWDALTGDEKHSFEHKH--IVRACAFSEDTHLLL-TGGFE 123 (268)
Q Consensus 51 ~~~~~~~~~h~--~~V~~~~~~~~~~~l~s~s~--D~~v~iw~~~~~~~~~~~~~~~--~v~~v~~~~~~~~l~-s~~~d 123 (268)
.+.+.++. |. .....++|++++.+.++.+. ++.|++.|+.+++....+.... ....+.+. +..|+ +.-.+
T Consensus 9 ~~vv~~~p-~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~ 85 (266)
T 2iwa_A 9 VEVLNEFP-HDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLK 85 (266)
T ss_dssp EEEEEEEE-CCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTC
T ss_pred ceEEEEEE-CCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecC
Confidence 34556664 43 23678999998766566553 6899999999999888875333 22234443 44444 44567
Q ss_pred CeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEeeCCCeEEEEeCCCCceEEeecCC------CCEEEEEECC
Q 024372 124 KILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLETK------SPVTSAEVSR 197 (268)
Q Consensus 124 ~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~------~~v~~~~~s~ 197 (268)
+.+.++|..+.+.. ..+......-..+ .++++.++++. .++.|.++|.++.+.+..+... ..++.+.+.
T Consensus 86 ~~v~viD~~t~~v~-~~i~~g~~~g~gl--t~Dg~~l~vs~-gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~- 160 (266)
T 2iwa_A 86 NIGFIYDRRTLSNI-KNFTHQMKDGWGL--ATDGKILYGSD-GTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI- 160 (266)
T ss_dssp SEEEEEETTTTEEE-EEEECCSSSCCEE--EECSSSEEEEC-SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-
T ss_pred CEEEEEECCCCcEE-EEEECCCCCeEEE--EECCCEEEEEC-CCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-
Confidence 89999998765432 2332111111223 45677777765 4689999999999988877532 136778888
Q ss_pred CCcEEEEe-CCCeEEEEeCCCceeeeEEeCCC--------------CceeeEEcCCCCCEEEeccCCCeEEEEECCCC
Q 024372 198 DGRYITTA-DGSSVKFWDANHFGLVKGYNMPC--------------NTESASLEPKLGNIFIAGGEDMWVHVFDFHTG 260 (268)
Q Consensus 198 ~g~~l~~~-~~~~v~~wd~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~gs~d~~i~~wd~~~g 260 (268)
+|+..+.. .++.|.+-|..+++.+..+.... ....+++.++.+++|+++.....|++.++...
T Consensus 161 dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 161 NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 77666554 46799999999999888887531 22466777766678889988888999887643
No 235
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.05 E-value=2e-06 Score=69.21 Aligned_cols=217 Identities=8% Similarity=-0.056 Sum_probs=135.0
Q ss_pred CCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCC-cEEEEeeCCCcEEEEeCCCCCe
Q 024372 17 RPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANA-LFSASGSADFTAKLWDALTGDE 95 (268)
Q Consensus 17 ~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~-~~l~s~s~D~~v~iw~~~~~~~ 95 (268)
....+++|+| .++.+.++-..++.|..++...+.....+.........+++++++ .+.++-...+.|.+++......
T Consensus 36 ~~~~gi~~d~--~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~ 113 (267)
T 1npe_A 36 KVIIGLAFDC--VDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR 113 (267)
T ss_dssp EEEEEEEEET--TTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred CcEEEEEEec--CCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCE
Confidence 3456888885 245555555667788889887654433333323467889999865 4455666678999999865433
Q ss_pred eeeeccC-CeEEEEEECCCCCEEEEeeC---CCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEeeCCCeEE
Q 024372 96 KHSFEHK-HIVRACAFSEDTHLLLTGGF---EKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVR 171 (268)
Q Consensus 96 ~~~~~~~-~~v~~v~~~~~~~~l~s~~~---d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~ 171 (268)
....... .....++++|++..|+.+.. .+.|..+++... ...............+++.++++.++++....+.|.
T Consensus 114 ~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~-~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~ 192 (267)
T 1npe_A 114 RVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT-NRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAE 192 (267)
T ss_dssp EEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC-CCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred EEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC-CcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEE
Confidence 2222222 34678999996555554443 367888887532 211111122234678899888888888877778999
Q ss_pred EEeCCCCceEEeecCCCCEEEEEECCCCcEEEEe-CCCeEEEEeCCCceeeeEEeCCC--CceeeEEcC
Q 024372 172 LWDARSGKIVQTLETKSPVTSAEVSRDGRYITTA-DGSSVKFWDANHFGLVKGYNMPC--NTESASLEP 237 (268)
Q Consensus 172 iwd~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~-~~~~v~~wd~~~~~~~~~~~~~~--~~~~~~~~~ 237 (268)
.+|+........+........+++. ++.++++. .++.|..+|..+++.+..+.... .+..+++.|
T Consensus 193 ~~~~~g~~~~~~~~~~~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~ 260 (267)
T 1npe_A 193 CLNPAQPGRRKVLEGLQYPFAVTSY-GKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIAL 260 (267)
T ss_dssp EEETTEEEEEEEEECCCSEEEEEEE-TTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEEC
T ss_pred EEecCCCceEEEecCCCCceEEEEe-CCEEEEEECCCCeEEEEeCCCCCceEEEccccccccceeeecC
Confidence 9999865443333333345667765 34444444 46799999998888777775432 234444444
No 236
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.02 E-value=2.1e-07 Score=74.89 Aligned_cols=197 Identities=11% Similarity=0.026 Sum_probs=129.9
Q ss_pred ecCC--CeeeEEEecCCCCCcEEEEEeC--CCCeEEeeCCCCCeEEEeeCcc-CcEEEEEecCCCcEEEEeeCCCcEEEE
Q 024372 14 GHSR--PVVDLFYSPITPDGFFLVSASK--DSSPMLRNGETGDWIGTFEGHK-GAVWSCCLDANALFSASGSADFTAKLW 88 (268)
Q Consensus 14 ~h~~--~v~~~~f~~~~~dg~~l~s~s~--d~~i~iw~~~~~~~~~~~~~h~-~~V~~~~~~~~~~~l~s~s~D~~v~iw 88 (268)
.|.. ...+++|+| ||.+.++.+. ++.|++.|..+++.+.++.-.. .....+++.. +.+.++.-.++.+.++
T Consensus 16 p~~~~~f~~Gl~~~~---dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g-~~lyv~t~~~~~v~vi 91 (266)
T 2iwa_A 16 PHDPYAFTQGLVYAE---NDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLN-EKLYQVVWLKNIGFIY 91 (266)
T ss_dssp ECCTTCCEEEEEECS---TTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEET-TEEEEEETTCSEEEEE
T ss_pred ECCCCCCcccEEEeC---CCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeC-CEEEEEEecCCEEEEE
Confidence 4554 357999984 6655554443 5789999999999988875211 2223455553 2334555578999999
Q ss_pred eCCCCCeeeeeccCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEecC----CcccEEEEEEeCCCCcEEEEe
Q 024372 89 DALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGN----SSGSIRTVAWLHSDQTILSSC 164 (268)
Q Consensus 89 ~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~ 164 (268)
|..+.+.+.++....+ ....++++++.++.+..++.+.++|..+.+........ .....+.+.|. + +.+++..
T Consensus 92 D~~t~~v~~~i~~g~~-~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-d-g~lyvn~ 168 (266)
T 2iwa_A 92 DRRTLSNIKNFTHQMK-DGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-N-GEVWANI 168 (266)
T ss_dssp ETTTTEEEEEEECCSS-SCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-T-TEEEEEE
T ss_pred ECCCCcEEEEEECCCC-CeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-C-CEEEEec
Confidence 9999998888865411 12335567777777777899999998764422221111 11125567776 3 4667776
Q ss_pred eCCCeEEEEeCCCCceEEeecCC--------------CCEEEEEECCCCcEE-EEe-CCCeEEEEeCCC
Q 024372 165 TDSGGVRLWDARSGKIVQTLETK--------------SPVTSAEVSRDGRYI-TTA-DGSSVKFWDANH 217 (268)
Q Consensus 165 ~~d~~i~iwd~~~~~~~~~~~~~--------------~~v~~~~~s~~g~~l-~~~-~~~~v~~wd~~~ 217 (268)
..++.|.+-|+++++.+.++... ...+.++++|+++.+ +++ ....|...++..
T Consensus 169 ~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 169 WQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp TTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred CCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 66789999999999998887642 246899999998654 444 346777666543
No 237
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.99 E-value=1.2e-07 Score=75.63 Aligned_cols=183 Identities=13% Similarity=0.142 Sum_probs=122.8
Q ss_pred ecCC--CeeeEEEecCCCCCcEEEEEeCCC--CeEEeeCCCCCeEEEeeCccCc-EEEEEecCCCcEEEEeeCCCcEEEE
Q 024372 14 GHSR--PVVDLFYSPITPDGFFLVSASKDS--SPMLRNGETGDWIGTFEGHKGA-VWSCCLDANALFSASGSADFTAKLW 88 (268)
Q Consensus 14 ~h~~--~v~~~~f~~~~~dg~~l~s~s~d~--~i~iw~~~~~~~~~~~~~h~~~-V~~~~~~~~~~~l~s~s~D~~v~iw 88 (268)
.|.. ...+|.|+ ++.+..+++.++ .|+++|..+|+.++++.-.... -..+++..+ .+....-.++.+.++
T Consensus 38 phd~~~ftqGL~~~----~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~-~ly~ltw~~~~v~v~ 112 (262)
T 3nol_A 38 PHDTKAFTEGFFYR----NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKD-KIVGLTWKNGLGFVW 112 (262)
T ss_dssp ECCTTCEEEEEEEE----TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETT-EEEEEESSSSEEEEE
T ss_pred cCCCCcccceEEEE----CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCC-EEEEEEeeCCEEEEE
Confidence 4554 34699997 567777777776 8899999999998888643321 123444433 333444568999999
Q ss_pred eCCCCCeeeeeccCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEec-C---CcccEEEEEEeCCCCcEEEEe
Q 024372 89 DALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVG-N---SSGSIRTVAWLHSDQTILSSC 164 (268)
Q Consensus 89 ~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~-~---~~~~v~~~~~~~~~~~~~~~~ 164 (268)
|..+.+.+.++..+..-..+ .++++.|+.+..++.|.++|..+.+......- . ....++.+.|. + +.+.+..
T Consensus 113 D~~t~~~~~ti~~~~eG~gl--t~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~-G~lyan~ 188 (262)
T 3nol_A 113 NIRNLRQVRSFNYDGEGWGL--THNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-D-GEIFANV 188 (262)
T ss_dssp ETTTCCEEEEEECSSCCCCE--EECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-T-TEEEEEE
T ss_pred ECccCcEEEEEECCCCceEE--ecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-C-CEEEEEE
Confidence 99999999888764422233 35677777766678899999876543222111 1 11234556765 3 4677777
Q ss_pred eCCCeEEEEeCCCCceEEeecCC-------------CCEEEEEECCCCcEEEEe
Q 024372 165 TDSGGVRLWDARSGKIVQTLETK-------------SPVTSAEVSRDGRYITTA 205 (268)
Q Consensus 165 ~~d~~i~iwd~~~~~~~~~~~~~-------------~~v~~~~~s~~g~~l~~~ 205 (268)
..++.|.+.|.++++.+..+... ...+.|+++|+++.|...
T Consensus 189 w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVT 242 (262)
T 3nol_A 189 WQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVT 242 (262)
T ss_dssp TTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEE
T ss_pred ccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEE
Confidence 67789999999999998877542 246899999987665443
No 238
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.99 E-value=6.6e-08 Score=88.62 Aligned_cols=205 Identities=11% Similarity=0.077 Sum_probs=130.1
Q ss_pred CCCeEEeeCCCCCeEEEeeC--cc-----------------------------CcEEEEEecCCCcEEEEeeCCCc----
Q 024372 40 DSSPMLRNGETGDWIGTFEG--HK-----------------------------GAVWSCCLDANALFSASGSADFT---- 84 (268)
Q Consensus 40 d~~i~iw~~~~~~~~~~~~~--h~-----------------------------~~V~~~~~~~~~~~l~s~s~D~~---- 84 (268)
++.+..+|..+|+.+=++.. +. ..-..++++++..+++.+..++.
T Consensus 182 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~ 261 (689)
T 1yiq_A 182 RGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDP 261 (689)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCH
T ss_pred CCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCcccc
Confidence 68899999999997755531 00 01124678888777777776653
Q ss_pred ---------------EEEEeCCCCCeeeeeccC----------CeEEEEEECCCCC---EEEEeeCCCeEEEEECCCCCC
Q 024372 85 ---------------AKLWDALTGDEKHSFEHK----------HIVRACAFSEDTH---LLLTGGFEKILRIFDLNRPDA 136 (268)
Q Consensus 85 ---------------v~iw~~~~~~~~~~~~~~----------~~v~~v~~~~~~~---~l~s~~~d~~i~~~d~~~~~~ 136 (268)
|..+|..+++.+-.+... .+........+++ .++.++.+|.++++|..+++.
T Consensus 262 ~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 341 (689)
T 1yiq_A 262 KWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGEL 341 (689)
T ss_dssp HHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCE
T ss_pred CCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCE
Confidence 999999999987766421 1121122222554 788999999999999887764
Q ss_pred CCeEecCC---------------------------cccE-----------EEEEEeCCCCcEEEEeeC------------
Q 024372 137 PPREVGNS---------------------------SGSI-----------RTVAWLHSDQTILSSCTD------------ 166 (268)
Q Consensus 137 ~~~~~~~~---------------------------~~~v-----------~~~~~~~~~~~~~~~~~~------------ 166 (268)
........ ...+ ..++++|+.+.+++...+
T Consensus 342 l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~ 421 (689)
T 1yiq_A 342 LSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAP 421 (689)
T ss_dssp EEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCC
T ss_pred eccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccc
Confidence 31111000 0000 115667766655543211
Q ss_pred --------------------------------CCeEEEEeCCCCceEEeecCCCCEEEEEECCCCcEE-EEeCCCeEEEE
Q 024372 167 --------------------------------SGGVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYI-TTADGSSVKFW 213 (268)
Q Consensus 167 --------------------------------d~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~g~~l-~~~~~~~v~~w 213 (268)
+|.|+.||+.+++.+..++...++..-.++..+.++ +++.|+.++.|
T Consensus 422 ~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~gt~dg~l~a~ 501 (689)
T 1yiq_A 422 KRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEGSADGRVIAY 501 (689)
T ss_dssp CCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEE
T ss_pred cccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEECCCCcEEEE
Confidence 378999999999998887765544443445454454 45568999999
Q ss_pred eCCCceeeeEEeCCCCce--eeEEcCCCCCEEEe
Q 024372 214 DANHFGLVKGYNMPCNTE--SASLEPKLGNIFIA 245 (268)
Q Consensus 214 d~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 245 (268)
|.++++.+..+..+.... ...+.. +|+++++
T Consensus 502 D~~tG~~lw~~~~~~~~~~~p~ty~~-~G~qyv~ 534 (689)
T 1yiq_A 502 AADTGEKLWEQPAASGVMAAPVTYSV-DGEQYVT 534 (689)
T ss_dssp ETTTCCEEEEEECSSCCCSCCEEEEE-TTEEEEE
T ss_pred ECCCCccceeeeCCCCcccCceEEEE-CCEEEEE
Confidence 999999998888765433 233334 5665543
No 239
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.98 E-value=2e-07 Score=83.62 Aligned_cols=233 Identities=12% Similarity=0.046 Sum_probs=140.8
Q ss_pred CcEEEEEeCCCCeEEeeCCCCCeEEEee--CccC--cEEE-EEecCCCcEEEEeeC-----CCcEEEEeCCCCCeeeeec
Q 024372 31 GFFLVSASKDSSPMLRNGETGDWIGTFE--GHKG--AVWS-CCLDANALFSASGSA-----DFTAKLWDALTGDEKHSFE 100 (268)
Q Consensus 31 g~~l~s~s~d~~i~iw~~~~~~~~~~~~--~h~~--~V~~-~~~~~~~~~l~s~s~-----D~~v~iw~~~~~~~~~~~~ 100 (268)
+..++.++.|+.+..+|..+|+.+-++. .+.. .+.+ ..+. ++..++..+. ++.|+.+|..+++.+-.+.
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~-~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVA-KDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAF 193 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEE-CCEEEEEecCCccCCCCEEEEEECCCCcEEEEEc
Confidence 4477888899999999999998765443 2211 1110 0111 4544443332 7999999999999877654
Q ss_pred cCCeE---------------------------------------EEEEECCCCCEEEEeeCC----------------Ce
Q 024372 101 HKHIV---------------------------------------RACAFSEDTHLLLTGGFE----------------KI 125 (268)
Q Consensus 101 ~~~~v---------------------------------------~~v~~~~~~~~l~s~~~d----------------~~ 125 (268)
...+. ..+++.+....++.+..+ +.
T Consensus 194 ~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~ 273 (571)
T 2ad6_A 194 ATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMT 273 (571)
T ss_dssp SSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTE
T ss_pred cCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEE
Confidence 32111 124455655566655432 25
Q ss_pred EEEEECCCCCCCCeEecC-C--------cccEEEEEEeCCCC--cEEEEeeCCCeEEEEeCCCCceEEeecCCC------
Q 024372 126 LRIFDLNRPDAPPREVGN-S--------SGSIRTVAWLHSDQ--TILSSCTDSGGVRLWDARSGKIVQTLETKS------ 188 (268)
Q Consensus 126 i~~~d~~~~~~~~~~~~~-~--------~~~v~~~~~~~~~~--~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~------ 188 (268)
+..+|..+++...+.... + ..++. +....++. .+++.++.+|.+..+|.++|+.+..++...
T Consensus 274 v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~ 352 (571)
T 2ad6_A 274 IWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFK 352 (571)
T ss_dssp EEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEE
T ss_pred EEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccc
Confidence 888888777644333221 1 11221 11112342 355566778999999999999876654211
Q ss_pred --------CE--------------------------EEEEECCCCcEEEE-e----------------------------
Q 024372 189 --------PV--------------------------TSAEVSRDGRYITT-A---------------------------- 205 (268)
Q Consensus 189 --------~v--------------------------~~~~~s~~g~~l~~-~---------------------------- 205 (268)
++ ..++++|+..++.. .
T Consensus 353 ~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~ 432 (571)
T 2ad6_A 353 KVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMY 432 (571)
T ss_dssp EECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEE
T ss_pred cccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceec
Confidence 11 23567776554432 1
Q ss_pred ---------CCCeEEEEeCCCceeeeEEeCCCCceeeEEcCCCCCEEEeccCCCeEEEEECCCCcEEeec
Q 024372 206 ---------DGSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIAIT 266 (268)
Q Consensus 206 ---------~~~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~d~~i~~wd~~~g~~~~~~ 266 (268)
.++.|..||+.+++.+-.+..........+.. .+..++.++.|+.|+.||.++|+++-.+
T Consensus 433 ~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t-~gg~v~~g~~dg~l~a~D~~tG~~lw~~ 501 (571)
T 2ad6_A 433 PGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWGGTLYT-KGGLVWYATLDGYLKALDNKDGKELWNF 501 (571)
T ss_dssp ECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCSBCEEE-TTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred cCccccCCCCCCeEEEEECCCCCEEEEecCCCCccceeEEE-CCCEEEEEcCCCeEEEEECCCCCEEEEE
Confidence 23679999999988877776543333332222 2556666899999999999999987553
No 240
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.95 E-value=4.1e-06 Score=69.25 Aligned_cols=238 Identities=10% Similarity=0.048 Sum_probs=143.4
Q ss_pred eecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeC--------------------ccCcEEEEEecC-
Q 024372 13 HGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEG--------------------HKGAVWSCCLDA- 71 (268)
Q Consensus 13 ~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~--------------------h~~~V~~~~~~~- 71 (268)
.+.-....++++.| +|+++.++..++.|..|+...++.. .+.. .......+++.+
T Consensus 15 ~g~~~~p~~i~~d~---~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~ 90 (322)
T 2fp8_A 15 EAPSYAPNSFTFDS---TNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQ 90 (322)
T ss_dssp ECSSSCCCCEECCT---TCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETT
T ss_pred CCccCCceEEEEcC---CCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCC
Confidence 33333445777874 7887888889999999988776543 2221 113577889997
Q ss_pred CCcEEEEeeCCCcEEEEeCCCCCeeeeec-----cCCeEEEEEECC-CCCEEEEeeC-----------------CCeEEE
Q 024372 72 NALFSASGSADFTAKLWDALTGDEKHSFE-----HKHIVRACAFSE-DTHLLLTGGF-----------------EKILRI 128 (268)
Q Consensus 72 ~~~~l~s~s~D~~v~iw~~~~~~~~~~~~-----~~~~v~~v~~~~-~~~~l~s~~~-----------------d~~i~~ 128 (268)
++.++++. ..+.+..+|..++....... .......+.+.+ ++++.++-.. ++.+..
T Consensus 91 ~g~l~v~d-~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~ 169 (322)
T 2fp8_A 91 NNQLYIVD-CYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIK 169 (322)
T ss_dssp TTEEEEEE-TTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEE
T ss_pred CCcEEEEE-CCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEE
Confidence 66655443 34457888876543222111 112467789999 9987766432 356777
Q ss_pred EECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEeeCCCeEEEEeCCCCc--eEEee-cCCCCEEEEEECCCCcEEEEe
Q 024372 129 FDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGK--IVQTL-ETKSPVTSAEVSRDGRYITTA 205 (268)
Q Consensus 129 ~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~--~~~~~-~~~~~v~~~~~s~~g~~l~~~ 205 (268)
||..+++. ............+++.+++..++++-...+.|..+|+.... ....+ .... ...+++.++|++.++.
T Consensus 170 ~d~~~~~~--~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~ 246 (322)
T 2fp8_A 170 YDPSTKET--TLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSS 246 (322)
T ss_dssp EETTTTEE--EEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEE
T ss_pred EeCCCCEE--EEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEe
Confidence 88654321 11111111234578888877676665566899999987421 11111 1223 7889999999887664
Q ss_pred -C----------CCeEEEEeCCCceeeeEEeCCC-----CceeeEEcCCCCCEEEeccCCCeEEEEECCCCc
Q 024372 206 -D----------GSSVKFWDANHFGLVKGYNMPC-----NTESASLEPKLGNIFIAGGEDMWVHVFDFHTGE 261 (268)
Q Consensus 206 -~----------~~~v~~wd~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~gs~d~~i~~wd~~~g~ 261 (268)
. .+.|..+|.. ++.+..+..+. ....+.. . .++++++...+..|.+++.....
T Consensus 247 ~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~-~-~g~L~v~~~~~~~i~~~~~~~~~ 315 (322)
T 2fp8_A 247 SEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQE-H-DGLLYIGTLFHGSVGILVYDKKG 315 (322)
T ss_dssp EEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEE-E-TTEEEEECSSCSEEEEEEC----
T ss_pred cCcccccccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEE-e-CCEEEEeecCCCceEEEeccccc
Confidence 3 2467778864 55666666542 1223333 3 57888887788889999986443
No 241
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.94 E-value=3e-07 Score=84.15 Aligned_cols=205 Identities=13% Similarity=0.099 Sum_probs=132.2
Q ss_pred CCCeEEeeCCCCCeEEEeeCccCc--------------------------------EEEEEecCCCcEEEEeeCCC----
Q 024372 40 DSSPMLRNGETGDWIGTFEGHKGA--------------------------------VWSCCLDANALFSASGSADF---- 83 (268)
Q Consensus 40 d~~i~iw~~~~~~~~~~~~~h~~~--------------------------------V~~~~~~~~~~~l~s~s~D~---- 83 (268)
++.+..+|..+|+.+-++...... ...+++++++..++.+..++
T Consensus 189 ~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~ 268 (677)
T 1kb0_A 189 RGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWS 268 (677)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSC
T ss_pred CCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCcccc
Confidence 688999999999987666432111 12457788877777666553
Q ss_pred ---------------cEEEEeCCCCCeeeeecc--C--------CeEEEEEECCCC---CEEEEeeCCCeEEEEECCCCC
Q 024372 84 ---------------TAKLWDALTGDEKHSFEH--K--------HIVRACAFSEDT---HLLLTGGFEKILRIFDLNRPD 135 (268)
Q Consensus 84 ---------------~v~iw~~~~~~~~~~~~~--~--------~~v~~v~~~~~~---~~l~s~~~d~~i~~~d~~~~~ 135 (268)
.|..+|..+++.+-.+.. . .....+....+| ..++.++.++.+.++|..+++
T Consensus 269 ~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~ 348 (677)
T 1kb0_A 269 HKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGK 348 (677)
T ss_dssp HHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCC
T ss_pred CCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCC
Confidence 599999999998776642 1 111222333466 688899999999999988776
Q ss_pred CCCeEecCCc---------c-cE------------------------EEEEEeCCCCcEEEEee----------------
Q 024372 136 APPREVGNSS---------G-SI------------------------RTVAWLHSDQTILSSCT---------------- 165 (268)
Q Consensus 136 ~~~~~~~~~~---------~-~v------------------------~~~~~~~~~~~~~~~~~---------------- 165 (268)
.......... + ++ ..++++|+.+.+++...
T Consensus 349 ~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~ 428 (677)
T 1kb0_A 349 FISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQ 428 (677)
T ss_dssp EEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTC
T ss_pred EeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccccc
Confidence 4322211100 0 00 13566777766555432
Q ss_pred --------------------------CCCeEEEEeCCCCceEEeecCCCCEEEEEECCCCcEE-EEeCCCeEEEEeCCCc
Q 024372 166 --------------------------DSGGVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYI-TTADGSSVKFWDANHF 218 (268)
Q Consensus 166 --------------------------~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~g~~l-~~~~~~~v~~wd~~~~ 218 (268)
..+.|..||+.+++.+..++...++....++.++..+ +++.++.+++||.+++
T Consensus 429 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG 508 (677)
T 1kb0_A 429 AGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATG 508 (677)
T ss_dssp CCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTC
T ss_pred ccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCCCCcCcceEeCCCEEEEECCCCcEEEEECCCC
Confidence 1278999999999998877655554455555555554 4556899999999999
Q ss_pred eeeeEEeCCCCce--eeEEcCCCCCEEEe
Q 024372 219 GLVKGYNMPCNTE--SASLEPKLGNIFIA 245 (268)
Q Consensus 219 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 245 (268)
+.+..+..+.... ...+.. +|+++++
T Consensus 509 ~~lw~~~~~~~~~~~p~~y~~-~G~~~v~ 536 (677)
T 1kb0_A 509 EKLWEAPTGTGVVAAPSTYMV-DGRQYVS 536 (677)
T ss_dssp CEEEEEECSSCCCSCCEEEEE-TTEEEEE
T ss_pred ceeeeeeCCCCcccCCEEEEe-CCEEEEE
Confidence 9999998765432 223334 4665443
No 242
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.93 E-value=5.5e-07 Score=71.84 Aligned_cols=188 Identities=13% Similarity=0.109 Sum_probs=124.0
Q ss_pred CeEEEeeCcc--CcEEEEEecCCCcEEEEeeCCC--cEEEEeCCCCCeeeeeccCCeEEEEEECCCCCEEEEe-eCCCeE
Q 024372 52 DWIGTFEGHK--GAVWSCCLDANALFSASGSADF--TAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTG-GFEKIL 126 (268)
Q Consensus 52 ~~~~~~~~h~--~~V~~~~~~~~~~~l~s~s~D~--~v~iw~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~s~-~~d~~i 126 (268)
+.++++. |. .-...+.|+ ++.+..+.+.++ .|+..|+.+++.................+++..|+.. -.++.+
T Consensus 32 ~vv~~~p-hd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v 109 (262)
T 3nol_A 32 QIVHSYP-HDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLG 109 (262)
T ss_dssp EEEEEEE-CCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEE
T ss_pred EEEEEec-CCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEE
Confidence 4556664 43 345788888 566667777766 8999999999998887654433332223334455544 468899
Q ss_pred EEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEeeCCCeEEEEeCCCCceEEeecCC------CCEEEEEECCCCc
Q 024372 127 RIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLETK------SPVTSAEVSRDGR 200 (268)
Q Consensus 127 ~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~------~~v~~~~~s~~g~ 200 (268)
.+||..+.+...+......+ ..++ ++++.++.+.. ++.|.++|..+.+.+.++... ..++.+.+. +|+
T Consensus 110 ~v~D~~t~~~~~ti~~~~eG--~glt--~dg~~L~~SdG-s~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~ 183 (262)
T 3nol_A 110 FVWNIRNLRQVRSFNYDGEG--WGLT--HNDQYLIMSDG-TPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGE 183 (262)
T ss_dssp EEEETTTCCEEEEEECSSCC--CCEE--ECSSCEEECCS-SSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTE
T ss_pred EEEECccCcEEEEEECCCCc--eEEe--cCCCEEEEECC-CCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCE
Confidence 99998765433222222222 2233 45667766644 578999999999988876541 235567776 777
Q ss_pred EEEEe-CCCeEEEEeCCCceeeeEEeCCC-------------CceeeEEcCCCCCEEEecc
Q 024372 201 YITTA-DGSSVKFWDANHFGLVKGYNMPC-------------NTESASLEPKLGNIFIAGG 247 (268)
Q Consensus 201 ~l~~~-~~~~v~~wd~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~gs 247 (268)
+.+.. .++.|.+.|.++++.+..+.... -...+++.+..+++|++|=
T Consensus 184 lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 184 IFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp EEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred EEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 66655 46799999999999888887631 1245777886677777774
No 243
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.93 E-value=4.3e-07 Score=82.97 Aligned_cols=234 Identities=13% Similarity=0.106 Sum_probs=146.1
Q ss_pred CcEEEEEeCCCCeEEeeCCCCCeEEEeeCcc----CcEEE-EEecCCCcEEEEee-----CCCcEEEEeCCCCCeeeeec
Q 024372 31 GFFLVSASKDSSPMLRNGETGDWIGTFEGHK----GAVWS-CCLDANALFSASGS-----ADFTAKLWDALTGDEKHSFE 100 (268)
Q Consensus 31 g~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~----~~V~~-~~~~~~~~~l~s~s-----~D~~v~iw~~~~~~~~~~~~ 100 (268)
+..++.++.|+.+..+|..+|+.+-++.... ..+.. ..+ .++..++..+ .++.|+.+|..+++.+-.+.
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v-~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRV-VKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEE-ECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence 4578889999999999999999775554311 01110 001 1444444322 25899999999999877664
Q ss_pred cC--C------------------------------eEEEEEECCCCCEEEEeeCCCe-------------------EEEE
Q 024372 101 HK--H------------------------------IVRACAFSEDTHLLLTGGFEKI-------------------LRIF 129 (268)
Q Consensus 101 ~~--~------------------------------~v~~v~~~~~~~~l~s~~~d~~-------------------i~~~ 129 (268)
.. . ....+++.++..+++.+..++. |.-+
T Consensus 196 ~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~Al 275 (668)
T 1kv9_A 196 TVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAI 275 (668)
T ss_dssp SSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEE
T ss_pred ccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEE
Confidence 21 0 0123577887778888876653 8888
Q ss_pred ECCCCCCCCeEecC-Cc-------ccEEEEEEeCCCC--cEEEEeeCCCeEEEEeCCCCceEEeecCCC-----------
Q 024372 130 DLNRPDAPPREVGN-SS-------GSIRTVAWLHSDQ--TILSSCTDSGGVRLWDARSGKIVQTLETKS----------- 188 (268)
Q Consensus 130 d~~~~~~~~~~~~~-~~-------~~v~~~~~~~~~~--~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~----------- 188 (268)
|..+++...+.... +. .+........++. .+++.++.+|.+.++|.++|+.+...+...
T Consensus 276 D~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~ 355 (668)
T 1kv9_A 276 RPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLAT 355 (668)
T ss_dssp CTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTT
T ss_pred cCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEecccccccccccccccccc
Confidence 98877654443321 21 1222222222332 246677788999999999999874332110
Q ss_pred --------------------------CEEEEEECCCCcEEEE-e------------------------------------
Q 024372 189 --------------------------PVTSAEVSRDGRYITT-A------------------------------------ 205 (268)
Q Consensus 189 --------------------------~v~~~~~s~~g~~l~~-~------------------------------------ 205 (268)
....++++|+..++.. .
T Consensus 356 g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~ 435 (668)
T 1kv9_A 356 GRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAV 435 (668)
T ss_dssp CCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGG
T ss_pred CCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCC
Confidence 0112567776544321 0
Q ss_pred CCCeEEEEeCCCceeeeEEeCCCCceeeEEcCCCCCEEEeccCCCeEEEEECCCCcEEeec
Q 024372 206 DGSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIAIT 266 (268)
Q Consensus 206 ~~~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~d~~i~~wd~~~g~~~~~~ 266 (268)
.++.|..||+.+++.+-.+..........+.. .+.++++|+.|+.++.||.++|+++..+
T Consensus 436 ~~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t-~gg~vf~g~~dg~l~a~d~~tG~~l~~~ 495 (668)
T 1kv9_A 436 VSGALLAWDPVKQKAAWKVPYPTHWNGGTLST-AGNLVFQGTAAGQMHAYSADKGEALWQF 495 (668)
T ss_dssp CEEEEEEEETTTTEEEEEEEESSSCCCCEEEE-TTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred ccceEEEEeCCCCcEEEEccCCCCCcCceeEe-CCCEEEEECCcccchhhhhhcChhheEe
Confidence 12679999999998887776544433333333 3677778899999999999999988654
No 244
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.93 E-value=6.8e-07 Score=71.39 Aligned_cols=177 Identities=11% Similarity=0.051 Sum_probs=122.3
Q ss_pred CeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcE--EEEEecCCCcEEEEeeCCCcEEEEeCCCCCe
Q 024372 18 PVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAV--WSCCLDANALFSASGSADFTAKLWDALTGDE 95 (268)
Q Consensus 18 ~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V--~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~ 95 (268)
...+|.|+ ++.+..+.+.++.|+++|..+|+.++++ -. ... ..+++..+..+ ...-.++.+.++|..+.+.
T Consensus 56 ftqGL~~~----~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~-~~~FgeGit~~g~~Ly-~ltw~~~~v~V~D~~Tl~~ 128 (268)
T 3nok_A 56 FTQGLVFH----QGHFFESTGHQGTLRQLSLESAQPVWME-RL-GNIFAEGLASDGERLY-QLTWTEGLLFTWSGMPPQR 128 (268)
T ss_dssp CEEEEEEE----TTEEEEEETTTTEEEECCSSCSSCSEEE-EC-TTCCEEEEEECSSCEE-EEESSSCEEEEEETTTTEE
T ss_pred ccceEEEE----CCEEEEEcCCCCEEEEEECCCCcEEeEE-CC-CCcceeEEEEeCCEEE-EEEccCCEEEEEECCcCcE
Confidence 44699997 5678888888889999999999987776 22 223 33555544333 4455789999999999999
Q ss_pred eeeeccCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEec-CC---cccEEEEEEeCCCCcEEEEeeCCCeEE
Q 024372 96 KHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVG-NS---SGSIRTVAWLHSDQTILSSCTDSGGVR 171 (268)
Q Consensus 96 ~~~~~~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~-~~---~~~v~~~~~~~~~~~~~~~~~~d~~i~ 171 (268)
+.++.....-..++ ++++.|+.+..++.|.++|..+.+...+..- .. -..++.+.|. + +.+.+....++.|.
T Consensus 129 ~~ti~~~~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-d-G~lyanvw~s~~I~ 204 (268)
T 3nok_A 129 ERTTRYSGEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-N-GVIYANIWHSSDVL 204 (268)
T ss_dssp EEEEECSSCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-T-TEEEEEETTCSEEE
T ss_pred EEEEeCCCceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-C-CEEEEEECCCCeEE
Confidence 88887544322333 5677888777789999999876543222111 11 1234566765 3 45777776678999
Q ss_pred EEeCCCCceEEeecCC--------------CCEEEEEECCCCc-EEEEe
Q 024372 172 LWDARSGKIVQTLETK--------------SPVTSAEVSRDGR-YITTA 205 (268)
Q Consensus 172 iwd~~~~~~~~~~~~~--------------~~v~~~~~s~~g~-~l~~~ 205 (268)
+-|.++++.+.++... ...+.|+++|+++ +++++
T Consensus 205 vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 205 EIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp EECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred EEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 9999999998876532 2468999999865 44554
No 245
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.93 E-value=1.2e-07 Score=81.32 Aligned_cols=177 Identities=14% Similarity=0.167 Sum_probs=122.3
Q ss_pred CCCcEEEEEeCC------CCeEEeeCCCCCeEEEeeCccC---cEEEEEecCCCcEEEEee-------------------
Q 024372 29 PDGFFLVSASKD------SSPMLRNGETGDWIGTFEGHKG---AVWSCCLDANALFSASGS------------------- 80 (268)
Q Consensus 29 ~dg~~l~s~s~d------~~i~iw~~~~~~~~~~~~~h~~---~V~~~~~~~~~~~l~s~s------------------- 80 (268)
|+| +++++..+ +.+.+.|..+++.++++.--.+ .-+.+.|+|+++.+++..
T Consensus 147 pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~ 225 (462)
T 2ece_A 147 PDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDR 225 (462)
T ss_dssp SSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHH
T ss_pred CCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhc
Confidence 588 77777776 7899999999999999963222 234577899999888875
Q ss_pred CCCcEEEEeCCCCCeeeeeccC---CeEEEEEE--CCCCCEEEEee------CCCeEEEEECCCCCCCC-eEe--cC---
Q 024372 81 ADFTAKLWDALTGDEKHSFEHK---HIVRACAF--SEDTHLLLTGG------FEKILRIFDLNRPDAPP-REV--GN--- 143 (268)
Q Consensus 81 ~D~~v~iw~~~~~~~~~~~~~~---~~v~~v~~--~~~~~~l~s~~------~d~~i~~~d~~~~~~~~-~~~--~~--- 143 (268)
.+.+|.+||+.+++.+.++... ...+.+.| +|+++.++.++ .+++|.+|..+.+.... +.+ ..
T Consensus 226 ~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v 305 (462)
T 2ece_A 226 YGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPL 305 (462)
T ss_dssp SCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEEC
T ss_pred cCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccc
Confidence 3789999999988877777654 23445555 99999888776 45677655432211000 000 00
Q ss_pred -------------CcccEEEEEEeCCCCcEEEEeeCCCeEEEEeCCC---CceEEeecCCC---------------CEEE
Q 024372 144 -------------SSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARS---GKIVQTLETKS---------------PVTS 192 (268)
Q Consensus 144 -------------~~~~v~~~~~~~~~~~~~~~~~~d~~i~iwd~~~---~~~~~~~~~~~---------------~v~~ 192 (268)
.......+.+++++..+.++....+.|.++|+.. .+.+..+...+ ....
T Consensus 306 ~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~ 385 (462)
T 2ece_A 306 EGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQM 385 (462)
T ss_dssp CSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCC
T ss_pred cccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCE
Confidence 0123567888999999999988889999999852 34555554321 2578
Q ss_pred EEECCCCcEEEEeC
Q 024372 193 AEVSRDGRYITTAD 206 (268)
Q Consensus 193 ~~~s~~g~~l~~~~ 206 (268)
+.++|||++|..+.
T Consensus 386 ~~lSpDGk~LyVaN 399 (462)
T 2ece_A 386 LEISRDGRRVYVTN 399 (462)
T ss_dssp EEECTTSSEEEEEC
T ss_pred EEEcCCCCEEEEEc
Confidence 99999999886554
No 246
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.90 E-value=6e-07 Score=74.04 Aligned_cols=213 Identities=12% Similarity=0.035 Sum_probs=136.9
Q ss_pred cEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCCCcEEEEeCCCCCeeeeecc-CCeEEEEEE
Q 024372 32 FFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEKHSFEH-KHIVRACAF 110 (268)
Q Consensus 32 ~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~-~~~v~~v~~ 110 (268)
..|..++.++.+..+|.. ++....+..+...+.++...+++.+ ..++.++.+..+|.. +.....+.. ...+.++..
T Consensus 108 ~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~l-~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~ 184 (330)
T 3hxj_A 108 DILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGTI-YVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASI 184 (330)
T ss_dssp TEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSCE-EEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEE
T ss_pred CEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCEE-EEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEE
Confidence 357778889999999988 8777666655556666667777765 446678999999988 666555543 334556667
Q ss_pred CCCCCEEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEeeCCCeEEEEeCCCCceEEeecCCCC-
Q 024372 111 SEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLETKSP- 189 (268)
Q Consensus 111 ~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~- 189 (268)
.+++.+.+.. +.+..+| .+++... ........+.++...+++ .+.++ +.++.|..+|. +++.+..+.....
T Consensus 185 d~~g~l~v~t---~~l~~~d-~~g~~~~-~~~~~~~~~~~~~~~~~g-~l~v~-t~~~gl~~~~~-~g~~~~~~~~~~~~ 256 (330)
T 3hxj_A 185 GKDGTIYFGS---DKVYAIN-PDGTEKW-NFYAGYWTVTRPAISEDG-TIYVT-SLDGHLYAINP-DGTEKWRFKTGKRI 256 (330)
T ss_dssp CTTCCEEEES---SSEEEEC-TTSCEEE-EECCSSCCCSCCEECTTS-CEEEE-ETTTEEEEECT-TSCEEEEEECSSCC
T ss_pred cCCCEEEEEe---CEEEEEC-CCCcEEE-EEccCCcceeceEECCCC-eEEEE-cCCCeEEEECC-CCCEeEEeeCCCCc
Confidence 7778765544 7788888 4433221 222222345556655544 45444 45578888884 5666655543322
Q ss_pred EEEEEECCCCcEEEEeCCCeEEEEeCCCceeeeEEeCCCCce-eeEEcCCCCCEEEeccCCCeEEEEECC
Q 024372 190 VTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGYNMPCNTE-SASLEPKLGNIFIAGGEDMWVHVFDFH 258 (268)
Q Consensus 190 v~~~~~s~~g~~l~~~~~~~v~~wd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~gs~d~~i~~wd~~ 258 (268)
...+.+.+++++.+++.++.|..+|. +++.+..+..+.... +..... +|. +..|+.++.+++...+
T Consensus 257 ~~~~~~~~~g~l~v~t~~ggl~~~d~-~g~~~~~~~~~~~~~~~~~~d~-~g~-l~~gt~~G~~~~~~~~ 323 (330)
T 3hxj_A 257 ESSPVIGNTDTIYFGSYDGHLYAINP-DGTEKWNFETGSWIIATPVIDE-NGT-IYFGTRNGKFYALFNL 323 (330)
T ss_dssp CSCCEECTTSCEEEECTTCEEEEECT-TSCEEEEEECSSCCCSCCEECT-TCC-EEEECTTSCEEEEEC-
T ss_pred cccceEcCCCeEEEecCCCCEEEECC-CCcEEEEEEcCCccccceEEcC-CCE-EEEEcCCCeEEEEecc
Confidence 34566778888888888888999996 566666666554433 333323 455 6668889999888754
No 247
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.87 E-value=1.9e-06 Score=68.14 Aligned_cols=182 Identities=14% Similarity=0.100 Sum_probs=120.8
Q ss_pred ecCC--CeeeEEEecCCCCCcEEEEEeCCC--CeEEeeCCCCCeEEEeeCccCc-EEEEEecCCCcEEEEeeCCCcEEEE
Q 024372 14 GHSR--PVVDLFYSPITPDGFFLVSASKDS--SPMLRNGETGDWIGTFEGHKGA-VWSCCLDANALFSASGSADFTAKLW 88 (268)
Q Consensus 14 ~h~~--~v~~~~f~~~~~dg~~l~s~s~d~--~i~iw~~~~~~~~~~~~~h~~~-V~~~~~~~~~~~l~s~s~D~~v~iw 88 (268)
.|.. ...+|.|+ ++.+..+.+.++ .++..|..+|+.++++.-.... -..+++.. +.+....-.++.+.++
T Consensus 16 phd~~~ftqGL~~~----~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~-~~ly~ltw~~~~v~v~ 90 (243)
T 3mbr_X 16 PHDTTAFTEGLFYL----RGHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWR-DRLIQLTWRNHEGFVY 90 (243)
T ss_dssp ECCTTCCEEEEEEE----TTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEET-TEEEEEESSSSEEEEE
T ss_pred CCCCccccccEEEE----CCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeC-CEEEEEEeeCCEEEEE
Confidence 5654 56699998 356666666654 7899999999998887643221 12334443 3333445678999999
Q ss_pred eCCCCCeeeeeccCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEec-CC---cccEEEEEEeCCCCcEEEEe
Q 024372 89 DALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVG-NS---SGSIRTVAWLHSDQTILSSC 164 (268)
Q Consensus 89 ~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~-~~---~~~v~~~~~~~~~~~~~~~~ 164 (268)
|..+.+.+.++..+..-..++ ++++.|+.+..++.|.++|..+.+...+... .. ...++.+.+. ++.+++..
T Consensus 91 D~~tl~~~~ti~~~~~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~--~G~lyanv 166 (243)
T 3mbr_X 91 DLATLTPRARFRYPGEGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV--NGELLANV 166 (243)
T ss_dssp ETTTTEEEEEEECSSCCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TTEEEEEE
T ss_pred ECCcCcEEEEEeCCCCceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe--CCEEEEEE
Confidence 999999998887654323343 4566666666788999999876442211111 11 1234556654 44577776
Q ss_pred eCCCeEEEEeCCCCceEEeecCC--------------CCEEEEEECCCCcEEEE
Q 024372 165 TDSGGVRLWDARSGKIVQTLETK--------------SPVTSAEVSRDGRYITT 204 (268)
Q Consensus 165 ~~d~~i~iwd~~~~~~~~~~~~~--------------~~v~~~~~s~~g~~l~~ 204 (268)
..++.|.+-|.++++.+..+... ...+.|+++|+++.|..
T Consensus 167 w~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfV 220 (243)
T 3mbr_X 167 WLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFV 220 (243)
T ss_dssp TTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEE
T ss_pred CCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEE
Confidence 66789999999999998876521 23689999998765543
No 248
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.86 E-value=9.9e-07 Score=79.34 Aligned_cols=230 Identities=14% Similarity=0.056 Sum_probs=138.3
Q ss_pred EEEEeCCCCeEEeeCCCCCeEEEee--CccC--cEEE-EEecCCCcEEEEee-----CCCcEEEEeCCCCCeeeeeccCC
Q 024372 34 LVSASKDSSPMLRNGETGDWIGTFE--GHKG--AVWS-CCLDANALFSASGS-----ADFTAKLWDALTGDEKHSFEHKH 103 (268)
Q Consensus 34 l~s~s~d~~i~iw~~~~~~~~~~~~--~h~~--~V~~-~~~~~~~~~l~s~s-----~D~~v~iw~~~~~~~~~~~~~~~ 103 (268)
++.++.|+.+.-+|..+|+.+=+.. .+.. .+.+ -.+. ++..++.++ .++.|+.+|..+++.+-.+....
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~-~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~ 202 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVV-KDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATG 202 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSS
T ss_pred EEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEE-CCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCC
Confidence 7778899999999999998764433 2110 1110 0111 454444332 38999999999999876654322
Q ss_pred eE---------------------------------------EEEEECCCCCEEEEeeCC----------------CeEEE
Q 024372 104 IV---------------------------------------RACAFSEDTHLLLTGGFE----------------KILRI 128 (268)
Q Consensus 104 ~v---------------------------------------~~v~~~~~~~~l~s~~~d----------------~~i~~ 128 (268)
+. ...++.+...+++.+..+ +.+.-
T Consensus 203 ~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~A 282 (599)
T 1w6s_A 203 PDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFG 282 (599)
T ss_dssp CHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEE
T ss_pred CccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEE
Confidence 11 123455666677766654 37888
Q ss_pred EECCCCCCCCeEecC-Cc--------ccEEEEEEe-CCCC--cEEEEeeCCCeEEEEeCCCCceEEeecCCC--------
Q 024372 129 FDLNRPDAPPREVGN-SS--------GSIRTVAWL-HSDQ--TILSSCTDSGGVRLWDARSGKIVQTLETKS-------- 188 (268)
Q Consensus 129 ~d~~~~~~~~~~~~~-~~--------~~v~~~~~~-~~~~--~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~-------- 188 (268)
+|..+++........ +. .++. +... .++. .+++.++.+|.+.++|.++|+.+.......
T Consensus 283 ld~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~ 361 (599)
T 1w6s_A 283 RDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSV 361 (599)
T ss_dssp EETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEE
T ss_pred EeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCccccccc
Confidence 888877654433322 21 1121 1211 2332 456667788999999999999876543210
Q ss_pred ------C--------------------------EEEEEECCCCcEEEE--------------------------------
Q 024372 189 ------P--------------------------VTSAEVSRDGRYITT-------------------------------- 204 (268)
Q Consensus 189 ------~--------------------------v~~~~~s~~g~~l~~-------------------------------- 204 (268)
+ ...++++|+..++..
T Consensus 362 ~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~ 441 (599)
T 1w6s_A 362 DLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPG 441 (599)
T ss_dssp CTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEEC
T ss_pred ccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccC
Confidence 0 123455665443321
Q ss_pred --e------CCCeEEEEeCCCceeeeEEeCCCCceeeEEcCCCCCEEEeccCCCeEEEEECCCCcEEeec
Q 024372 205 --A------DGSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIAIT 266 (268)
Q Consensus 205 --~------~~~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~d~~i~~wd~~~g~~~~~~ 266 (268)
+ ..+.|..||+.+++.+-.+..........+.. .+.++..|+.|+.++.||.++|+++-.+
T Consensus 442 p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~t-agg~vf~gt~dg~l~A~D~~tG~~lW~~ 510 (599)
T 1w6s_A 442 PKGDRQNYEGLGQIKAYNAITGDYKWEKMERFAVWGGTMAT-AGDLVFYGTLDGYLKARDSDTGDLLWKF 510 (599)
T ss_dssp TTSBTTTTBCCEEEEEECTTTCCEEEEEEESSCCCSBCEEE-TTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CcCCcccCCCcCeEEEEECCCCCEEeEecCCCCccCcceEe-cCCEEEEECCCCeEEEEECCCCCEEEEe
Confidence 1 23678899999888776665433222222222 3566667899999999999999987543
No 249
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.83 E-value=1.4e-07 Score=77.95 Aligned_cols=217 Identities=17% Similarity=0.077 Sum_probs=128.4
Q ss_pred CCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCCCcEEEEeCCCCCeeeeecc-CCeEEEE
Q 024372 30 DGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEKHSFEH-KHIVRAC 108 (268)
Q Consensus 30 dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~-~~~v~~v 108 (268)
+|. |..++.+ +..+|. +++.+..+..+........+. ++ .+..++.++.+..+|.. +........ ...+.++
T Consensus 70 ~g~-l~v~t~~--l~~~d~-~g~~~~~~~~~~~~~~~~~~~-~~-~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~ 142 (330)
T 3hxj_A 70 DGT-IYFGSDK--VYAINP-DGTEKWRFDTKKAIVSDFTIF-ED-ILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATP 142 (330)
T ss_dssp TTE-ECCSSCE--EEEECC-CGGGGGGSCC-----CCEEEE-TT-EEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCC
T ss_pred CCc-EEEecCc--EEEECC-CCcEEEEEECCCCcccCceEE-CC-EEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeee
Confidence 554 4445555 777775 565443333222222222333 34 45567778899999987 666555443 2334555
Q ss_pred EECCCCCEEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEeeCCCeEEEEeCCCCceEEeecCC-
Q 024372 109 AFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLETK- 187 (268)
Q Consensus 109 ~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~- 187 (268)
...+++. +..++.++.+..+|.. ++... ........+.++...+++ .+.++. +.|..+| .+++.+..+...
T Consensus 143 ~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~-~~~~~~~~~~~~~~d~~g-~l~v~t---~~l~~~d-~~g~~~~~~~~~~ 214 (330)
T 3hxj_A 143 IVSEDGT-IYVGSNDNYLYAINPD-GTEKW-RFKTNDAITSAASIGKDG-TIYFGS---DKVYAIN-PDGTEKWNFYAGY 214 (330)
T ss_dssp EECTTSC-EEEECTTSEEEEECTT-SCEEE-EEECSSCCCSCCEECTTC-CEEEES---SSEEEEC-TTSCEEEEECCSS
T ss_pred EEcCCCE-EEEEcCCCEEEEECCC-CCEeE-EEecCCCceeeeEEcCCC-EEEEEe---CEEEEEC-CCCcEEEEEccCC
Confidence 6666776 4556778899999976 43222 222222334444544444 455443 7799999 777777665533
Q ss_pred CCEEEEEECCCCcEEEEeCCCeEEEEeCCCceeeeEEeCCCCce-eeEEcCCCCCEEEeccCCCeEEEEECCCCcEEee
Q 024372 188 SPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGYNMPCNTE-SASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIAI 265 (268)
Q Consensus 188 ~~v~~~~~s~~g~~l~~~~~~~v~~wd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~gs~d~~i~~wd~~~g~~~~~ 265 (268)
..+.++...++|.+.+++.++.+..+|. +.+.+..+....... .....+ +..+..++.++.|+.+|. +|+.+..
T Consensus 215 ~~~~~~~~~~~g~l~v~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~--~g~l~v~t~~ggl~~~d~-~g~~~~~ 289 (330)
T 3hxj_A 215 WTVTRPAISEDGTIYVTSLDGHLYAINP-DGTEKWRFKTGKRIESSPVIGN--TDTIYFGSYDGHLYAINP-DGTEKWN 289 (330)
T ss_dssp CCCSCCEECTTSCEEEEETTTEEEEECT-TSCEEEEEECSSCCCSCCEECT--TSCEEEECTTCEEEEECT-TSCEEEE
T ss_pred cceeceEECCCCeEEEEcCCCeEEEECC-CCCEeEEeeCCCCccccceEcC--CCeEEEecCCCCEEEECC-CCcEEEE
Confidence 4477888899998888887788888885 445555555433322 223322 345667777878999995 6776544
No 250
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.77 E-value=1.8e-06 Score=68.91 Aligned_cols=186 Identities=14% Similarity=0.092 Sum_probs=124.5
Q ss_pred CeEEEeeCcc--CcEEEEEecCCCcEEEEeeCCCcEEEEeCCCCCeeeeeccCCeEE--EEEECCCCCEEEEeeCCCeEE
Q 024372 52 DWIGTFEGHK--GAVWSCCLDANALFSASGSADFTAKLWDALTGDEKHSFEHKHIVR--ACAFSEDTHLLLTGGFEKILR 127 (268)
Q Consensus 52 ~~~~~~~~h~--~~V~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~v~--~v~~~~~~~~l~s~~~d~~i~ 127 (268)
+.++++. |. .-...+.|+. +.+..+.+.++.|++.|+.+++....+ ...... .+.+.. +++.+..-.++.+.
T Consensus 44 ~Vv~~~p-hd~~~ftqGL~~~~-~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g-~~Ly~ltw~~~~v~ 119 (268)
T 3nok_A 44 HIIREYP-HATNAFTQGLVFHQ-GHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDG-ERLYQLTWTEGLLF 119 (268)
T ss_dssp EEEEEEE-CCTTCCEEEEEEET-TEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECS-SCEEEEESSSCEEE
T ss_pred EEEEEEc-CCCccccceEEEEC-CEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeC-CEEEEEEccCCEEE
Confidence 4556664 43 3457888874 566678888899999999999987776 443332 344433 34444556789999
Q ss_pred EEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEeeCCCeEEEEeCCCCceEEeecCC------CCEEEEEECCCCcE
Q 024372 128 IFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLETK------SPVTSAEVSRDGRY 201 (268)
Q Consensus 128 ~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~------~~v~~~~~s~~g~~ 201 (268)
+||..+.+...+......+ ..++ ++++.++.+. .++.|.++|.++.+.+.++... ..++.+.+. +|++
T Consensus 120 V~D~~Tl~~~~ti~~~~eG--wGLt--~Dg~~L~vSd-Gs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~l 193 (268)
T 3nok_A 120 TWSGMPPQRERTTRYSGEG--WGLC--YWNGKLVRSD-GGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVI 193 (268)
T ss_dssp EEETTTTEEEEEEECSSCC--CCEE--EETTEEEEEC-SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEE
T ss_pred EEECCcCcEEEEEeCCCce--eEEe--cCCCEEEEEC-CCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEE
Confidence 9998765433222222222 2333 4566676665 4689999999999998877532 245667777 7776
Q ss_pred EEEe-CCCeEEEEeCCCceeeeEEeCCC--------------CceeeEEcCCCCCEEEecc
Q 024372 202 ITTA-DGSSVKFWDANHFGLVKGYNMPC--------------NTESASLEPKLGNIFIAGG 247 (268)
Q Consensus 202 l~~~-~~~~v~~wd~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~gs 247 (268)
.+.. .+..|.+.|.++++.+..+.... -...+++.+..+++|+||=
T Consensus 194 yanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 194 YANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp EEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred EEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 6655 46799999999998888876531 1245777887788888874
No 251
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.77 E-value=3.8e-06 Score=75.47 Aligned_cols=232 Identities=15% Similarity=0.088 Sum_probs=139.1
Q ss_pred CcEEEEEeCCCCeEEeeCCCCCeEEEeeCcc---------CcEEEEEec-CCCc-EEEEee------CCCcEEEEeCCCC
Q 024372 31 GFFLVSASKDSSPMLRNGETGDWIGTFEGHK---------GAVWSCCLD-ANAL-FSASGS------ADFTAKLWDALTG 93 (268)
Q Consensus 31 g~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~---------~~V~~~~~~-~~~~-~l~s~s------~D~~v~iw~~~~~ 93 (268)
+..++.++.|+.+.-.|..+|+.+=++.... .++ +.=. .+++ .++.++ .++.|+.+|..++
T Consensus 117 ~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~--v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG 194 (582)
T 1flg_A 117 GDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPT--IVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTG 194 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCE--EEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTC
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCE--EeCCCcCCcEEEEEeccccccCCCCEEEEEECCCC
Confidence 3467788999999999999998764443221 122 1101 1222 444443 3789999999999
Q ss_pred CeeeeeccCC-eE-----------------------------------------EEEEECCCCCEEEEeeC---------
Q 024372 94 DEKHSFEHKH-IV-----------------------------------------RACAFSEDTHLLLTGGF--------- 122 (268)
Q Consensus 94 ~~~~~~~~~~-~v-----------------------------------------~~v~~~~~~~~l~s~~~--------- 122 (268)
+.+-...... .+ ...++.|...+++.+..
T Consensus 195 ~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~ 274 (582)
T 1flg_A 195 EEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWA 274 (582)
T ss_dssp CEEEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGG
T ss_pred CEEeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcc
Confidence 8766543211 00 12345566666766552
Q ss_pred -----------C----CeEEEEECCCCCCCCeEec-CCc--------ccEEEEEEe-CCCC--cEEEEeeCCCeEEEEeC
Q 024372 123 -----------E----KILRIFDLNRPDAPPREVG-NSS--------GSIRTVAWL-HSDQ--TILSSCTDSGGVRLWDA 175 (268)
Q Consensus 123 -----------d----~~i~~~d~~~~~~~~~~~~-~~~--------~~v~~~~~~-~~~~--~~~~~~~~d~~i~iwd~ 175 (268)
| +.+.-+|..+++....... .+. .++. +... .++. .+++.++.+|.+.++|.
T Consensus 275 r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~ 353 (582)
T 1flg_A 275 RTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDR 353 (582)
T ss_dssp GSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEET
T ss_pred cccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEEC
Confidence 2 5788889887765544332 121 1221 1211 2343 35666778899999999
Q ss_pred CCCceEEeecCCCC----------------------------------------------EEEEEECCCCcE-EEEe---
Q 024372 176 RSGKIVQTLETKSP----------------------------------------------VTSAEVSRDGRY-ITTA--- 205 (268)
Q Consensus 176 ~~~~~~~~~~~~~~----------------------------------------------v~~~~~s~~g~~-l~~~--- 205 (268)
++|+.+..+..... ...++++|+..+ ++..
T Consensus 354 ~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~ 433 (582)
T 1flg_A 354 SNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHW 433 (582)
T ss_dssp TTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECE
T ss_pred CCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhc
Confidence 99998765532210 013455555332 2221
Q ss_pred ------------------------------CCCeEEEEeCCCceeeeEEeCCCCceeeEEcCCCCCEEEeccCCCeEEEE
Q 024372 206 ------------------------------DGSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVF 255 (268)
Q Consensus 206 ------------------------------~~~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~d~~i~~w 255 (268)
..+.|..||+.+++.+-.+............. .+.+++.|+.|+.++.|
T Consensus 434 ~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~t-agglvf~g~~dg~l~A~ 512 (582)
T 1flg_A 434 KEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPLWAGVLAT-AGNLVFTGTGDGYFKAF 512 (582)
T ss_dssp EEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSCCCSCCEEE-TTTEEEEECTTSEEEEE
T ss_pred ceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCCCcccceEe-CCCEEEEECCCCcEEEE
Confidence 14678999999988876665443332222222 35667779999999999
Q ss_pred ECCCCcEEeec
Q 024372 256 DFHTGEQIAIT 266 (268)
Q Consensus 256 d~~~g~~~~~~ 266 (268)
|.++|+++-.+
T Consensus 513 D~~tG~~lW~~ 523 (582)
T 1flg_A 513 DAKSGKELWKF 523 (582)
T ss_dssp ETTTCCEEEEE
T ss_pred ECCCCCEEEEe
Confidence 99999998653
No 252
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.77 E-value=3.6e-05 Score=61.50 Aligned_cols=200 Identities=11% Similarity=0.124 Sum_probs=132.1
Q ss_pred eeecCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeC-ccCcEEEEEecCCCcEEEEeeCCCcEEEEeC
Q 024372 12 CHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEG-HKGAVWSCCLDANALFSASGSADFTAKLWDA 90 (268)
Q Consensus 12 ~~~h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~-h~~~V~~~~~~~~~~~l~s~s~D~~v~iw~~ 90 (268)
+.|=.+.+.+++|+|. ++.+.+..-.++.|...|.. ++.++++.- -......+++.+++.++++.-.++.+.++++
T Consensus 22 l~g~~~~lSGla~~~~--~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v 98 (255)
T 3qqz_A 22 IAGITNNISSLTWSAQ--SNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISL 98 (255)
T ss_dssp CTTCCSCEEEEEEETT--TTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEE
T ss_pred CCCcccCcceeEEeCC--CCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEc
Confidence 3455567999999962 34444456667777778887 888877742 1245677888888888777667788999887
Q ss_pred CCCCe---eeeec-------cCCeEEEEEECCCCCEEEEeeCCCeEEEEECCC--CCCCCeEec-------CCcccEEEE
Q 024372 91 LTGDE---KHSFE-------HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNR--PDAPPREVG-------NSSGSIRTV 151 (268)
Q Consensus 91 ~~~~~---~~~~~-------~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~--~~~~~~~~~-------~~~~~v~~~ 151 (268)
..... ..... .......++++|.++.|+++.......+|.+.. ......... ........+
T Consensus 99 ~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l 178 (255)
T 3qqz_A 99 TPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGA 178 (255)
T ss_dssp CTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEE
T ss_pred CCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeE
Confidence 65442 12221 122357899999887777766554555555431 001112111 122346789
Q ss_pred EEeCCCCcEEEEeeCCCeEEEEeCCCCceEEeecCC----------CCEEEEEECCCCcEEEEeCCCeEEEEeC
Q 024372 152 AWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLETK----------SPVTSAEVSRDGRYITTADGSSVKFWDA 215 (268)
Q Consensus 152 ~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~----------~~v~~~~~s~~g~~l~~~~~~~v~~wd~ 215 (268)
++.|..+++++.+...+.|..+|.. ++.+..+... .....+++.|+|++.++++...+..+..
T Consensus 179 ~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~n~~y~f~~ 251 (255)
T 3qqz_A 179 EFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEPNRFYRFTP 251 (255)
T ss_dssp EEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETTTEEEEEEC
T ss_pred EEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCCceEEEEEe
Confidence 9999998888888888899999976 6666554322 3579999999999888887766655543
No 253
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.66 E-value=1.2e-05 Score=63.59 Aligned_cols=188 Identities=12% Similarity=0.076 Sum_probs=122.1
Q ss_pred CeEEEeeCcc--CcEEEEEecCCCcEEEEeeCC--CcEEEEeCCCCCeeeeeccCCeEEEEEECCCCC-EEEEeeCCCeE
Q 024372 52 DWIGTFEGHK--GAVWSCCLDANALFSASGSAD--FTAKLWDALTGDEKHSFEHKHIVRACAFSEDTH-LLLTGGFEKIL 126 (268)
Q Consensus 52 ~~~~~~~~h~--~~V~~~~~~~~~~~l~s~s~D--~~v~iw~~~~~~~~~~~~~~~~v~~v~~~~~~~-~l~s~~~d~~i 126 (268)
+.++++. |. +-+..+.|++ +.+..|.+.+ ..|+..|+.+++.................+.+. +....-.++.+
T Consensus 10 ~v~~~~p-hd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v 87 (243)
T 3mbr_X 10 RVVKRYP-HDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEG 87 (243)
T ss_dssp EEEEEEE-CCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEE
T ss_pred EEEEEcC-CCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEE
Confidence 4556663 53 4567888886 5555666665 489999999999988876544333222222233 44445578899
Q ss_pred EEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEeeCCCeEEEEeCCCCceEEeecCC------CCEEEEEECCCCc
Q 024372 127 RIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLETK------SPVTSAEVSRDGR 200 (268)
Q Consensus 127 ~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~------~~v~~~~~s~~g~ 200 (268)
.+||..+.+...+......+ ..++ ++++.++++-. ++.|.++|.++.+.+.+++.. ..++-+.+. +|+
T Consensus 88 ~v~D~~tl~~~~ti~~~~~G--wglt--~dg~~L~vSdg-s~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~ 161 (243)
T 3mbr_X 88 FVYDLATLTPRARFRYPGEG--WALT--SDDSHLYMSDG-TAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGE 161 (243)
T ss_dssp EEEETTTTEEEEEEECSSCC--CEEE--ECSSCEEEECS-SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE
T ss_pred EEEECCcCcEEEEEeCCCCc--eEEe--eCCCEEEEECC-CCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCE
Confidence 99998765432222222222 2343 45667776654 589999999999988877542 245666665 666
Q ss_pred EEEEe-CCCeEEEEeCCCceeeeEEeCCC--------------CceeeEEcCCCCCEEEecc
Q 024372 201 YITTA-DGSSVKFWDANHFGLVKGYNMPC--------------NTESASLEPKLGNIFIAGG 247 (268)
Q Consensus 201 ~l~~~-~~~~v~~wd~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~gs 247 (268)
..+.. .+..|.+.|.++++.+..+.... -...+++.+..+++|+||=
T Consensus 162 lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 162 LLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred EEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 66554 46799999999998888876431 1235677776677888874
No 254
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.66 E-value=7.6e-06 Score=75.77 Aligned_cols=237 Identities=10% Similarity=-0.025 Sum_probs=128.5
Q ss_pred CeeeEEEecCCCCCcEEEEEeC-CC----CeEEeeCCCC-CeEE-EeeCccCcEEEEEecCCCcEEEEeeCC-----CcE
Q 024372 18 PVVDLFYSPITPDGFFLVSASK-DS----SPMLRNGETG-DWIG-TFEGHKGAVWSCCLDANALFSASGSAD-----FTA 85 (268)
Q Consensus 18 ~v~~~~f~~~~~dg~~l~s~s~-d~----~i~iw~~~~~-~~~~-~~~~h~~~V~~~~~~~~~~~l~s~s~D-----~~v 85 (268)
.+.+..|+| |||++||-+.. +| +|.++|+.+| +.+. .+. .....++|+||++.|+..+.| ..|
T Consensus 175 ~~~~~~~S~--PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v 249 (751)
T 2xe4_A 175 DVMEVKPAP--PEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKV 249 (751)
T ss_dssp EEEEEEECT--TTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEE
T ss_pred EEeeeEecC--CCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEE
Confidence 455677762 49988875432 32 4889999998 6331 121 112356799999877666654 357
Q ss_pred EEEeCCCCCe--eeee--ccCCeEEEEEECCCCCEEEEee---CCCeEEEEECCCCCCCC--eEe-cCCcccEEEEEEeC
Q 024372 86 KLWDALTGDE--KHSF--EHKHIVRACAFSEDTHLLLTGG---FEKILRIFDLNRPDAPP--REV-GNSSGSIRTVAWLH 155 (268)
Q Consensus 86 ~iw~~~~~~~--~~~~--~~~~~v~~v~~~~~~~~l~s~~---~d~~i~~~d~~~~~~~~--~~~-~~~~~~v~~~~~~~ 155 (268)
+++++.+++. ...+ ........+.|+||++.|+..+ ....+.++|+.++.... ..+ ....+....+.|..
T Consensus 250 ~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~ 329 (751)
T 2xe4_A 250 WRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHG 329 (751)
T ss_dssp EEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEET
T ss_pred EEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeee
Confidence 7888877642 2222 2234456788999999887654 34567888887643222 222 22334445555443
Q ss_pred CCCcEEEEeeCC----CeEEEEeCCCCceEE--eecCCC--CEEEEEECCCCcEE-EE-eCCC--eEEEEeC-------C
Q 024372 156 SDQTILSSCTDS----GGVRLWDARSGKIVQ--TLETKS--PVTSAEVSRDGRYI-TT-ADGS--SVKFWDA-------N 216 (268)
Q Consensus 156 ~~~~~~~~~~~d----~~i~iwd~~~~~~~~--~~~~~~--~v~~~~~s~~g~~l-~~-~~~~--~v~~wd~-------~ 216 (268)
++.++.....+ ..|..+|+.+..... .+.... .+..+.+. +..+ ++ ..++ .|.++|+ .
T Consensus 330 -g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~--~~~lv~~~~~~g~~~l~~~dl~~~~~~~~ 406 (751)
T 2xe4_A 330 -TSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR--SNYLVVAGRRAGLTRIWTMMADSQDGVFK 406 (751)
T ss_dssp -TTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC--SSEEEEEEEETTEEEEEEEECCTTTSCCC
T ss_pred -CCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE--CCEEEEEEEeCCEEEEEEEeccccccccc
Confidence 55554444332 367777876532222 233332 24455554 4443 33 3454 4566775 2
Q ss_pred CceeeeEEeCCCCceeeEE------cCCCCCEEEeccCC---CeEEEEECCCCcE
Q 024372 217 HFGLVKGYNMPCNTESASL------EPKLGNIFIAGGED---MWVHVFDFHTGEQ 262 (268)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~gs~d---~~i~~wd~~~g~~ 262 (268)
..+.++.+..+.......+ ..+.+.++++.+.. ..++.+|+.+|+.
T Consensus 407 ~g~~~~~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~~ 461 (751)
T 2xe4_A 407 AGTGLREVVMEEPIFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHSR 461 (751)
T ss_dssp TTTCCEECCCCCSSCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCCE
T ss_pred CCccceEECCCCceeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCcE
Confidence 2221333433333222333 23334565555432 4688888877763
No 255
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.65 E-value=9.2e-07 Score=78.41 Aligned_cols=186 Identities=11% Similarity=0.147 Sum_probs=126.8
Q ss_pred CCCcEE-EEeeCCCcEEEEeCCCCCeee--eeccCCeEEEEEE-C-CCCCEEEEee------------------CCCeEE
Q 024372 71 ANALFS-ASGSADFTAKLWDALTGDEKH--SFEHKHIVRACAF-S-EDTHLLLTGG------------------FEKILR 127 (268)
Q Consensus 71 ~~~~~l-~s~s~D~~v~iw~~~~~~~~~--~~~~~~~v~~v~~-~-~~~~~l~s~~------------------~d~~i~ 127 (268)
+||+++ ++...+..|.+-|+.+.++.. .+........+.+ + |++++++.++ +++.+.
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 377765 555567789999999999877 4444455777777 5 8998888873 345788
Q ss_pred EEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEeeCC-------------------------------------CeE
Q 024372 128 IFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDS-------------------------------------GGV 170 (268)
Q Consensus 128 ~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d-------------------------------------~~i 170 (268)
+.|..+.+...+..-. +.-..++.++++..+++++... +.|
T Consensus 179 vID~~t~~v~~qI~Vg--g~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V 256 (595)
T 1fwx_A 179 AVDADKWEVAWQVLVS--GNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGV 256 (595)
T ss_dssp EEETTTTEEEEEEEES--SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTE
T ss_pred EEECCCCeEEEEEEeC--CCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcE
Confidence 8888754332222211 1123356678887777776332 248
Q ss_pred EEEeCCC--Cce-EEeecCCCCEEEEEECCCCcEEEEeC--CCeEEEEeCCCce------------eeeEEeCCCCceee
Q 024372 171 RLWDARS--GKI-VQTLETKSPVTSAEVSRDGRYITTAD--GSSVKFWDANHFG------------LVKGYNMPCNTESA 233 (268)
Q Consensus 171 ~iwd~~~--~~~-~~~~~~~~~v~~~~~s~~g~~l~~~~--~~~v~~wd~~~~~------------~~~~~~~~~~~~~~ 233 (268)
.+.|.++ ++. +..+.......++.++|||+++..++ +.+|.++|+.+.+ .+........+.-.
T Consensus 257 ~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~ 336 (595)
T 1fwx_A 257 KVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHT 336 (595)
T ss_dssp EEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEE
T ss_pred EEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceE
Confidence 8888887 555 55665444567899999999987653 5799999998652 23334444566677
Q ss_pred EEcCCCCCEEEeccCCCeEEEEECCC
Q 024372 234 SLEPKLGNIFIAGGEDMWVHVFDFHT 259 (268)
Q Consensus 234 ~~~~~~~~~~~~gs~d~~i~~wd~~~ 259 (268)
.|.+ +|..+++...|+.|-+||+.+
T Consensus 337 aF~~-dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 337 AFDG-RGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp EECT-TSEEEEEETTTTEEEEEEHHH
T ss_pred EECC-CCeEEEEEecCCcEEEEEhhH
Confidence 7887 476666778899999999876
No 256
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.58 E-value=5.8e-05 Score=61.88 Aligned_cols=223 Identities=11% Similarity=0.046 Sum_probs=129.1
Q ss_pred CCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCCC--cEEEEeCCCCC
Q 024372 17 RPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADF--TAKLWDALTGD 94 (268)
Q Consensus 17 ~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~--~v~iw~~~~~~ 94 (268)
....+++|+| +|+++++-..++.|..++... +....+.. .+....+++.+++.++++..... .|..++..++.
T Consensus 32 ~~pegia~~~---~g~lyv~d~~~~~I~~~d~~g-~~~~~~~~-~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~ 106 (306)
T 2p4o_A 32 TFLENLASAP---DGTIFVTNHEVGEIVSITPDG-NQQIHATV-EGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGT 106 (306)
T ss_dssp CCEEEEEECT---TSCEEEEETTTTEEEEECTTC-CEEEEEEC-SSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSC
T ss_pred CCcceEEECC---CCCEEEEeCCCCeEEEECCCC-ceEEEEeC-CCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCe
Confidence 3456788875 788777777888898888764 44433332 34678899999998766554322 46666766666
Q ss_pred eeeeec--cCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeE--------e-cCCcccEEEEEEeCCCCcEEEE
Q 024372 95 EKHSFE--HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPRE--------V-GNSSGSIRTVAWLHSDQTILSS 163 (268)
Q Consensus 95 ~~~~~~--~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~--------~-~~~~~~v~~~~~~~~~~~~~~~ 163 (268)
...... .......++..+++..+++-..++.|..+|...+...... . .........+ ++++..++++
T Consensus 107 ~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~ 184 (306)
T 2p4o_A 107 VETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVS 184 (306)
T ss_dssp EEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEE
T ss_pred EEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEE
Confidence 543322 2223344454555555555446788888886532100000 0 0001123344 5667777777
Q ss_pred eeCCCeEEEEeCCC-Cce--EEeecCCCCEEEEEECCCCcEEEEe-CCCeEEEEeCCCceee--eEEeCC-CCceeeEEc
Q 024372 164 CTDSGGVRLWDARS-GKI--VQTLETKSPVTSAEVSRDGRYITTA-DGSSVKFWDANHFGLV--KGYNMP-CNTESASLE 236 (268)
Q Consensus 164 ~~~d~~i~iwd~~~-~~~--~~~~~~~~~v~~~~~s~~g~~l~~~-~~~~v~~wd~~~~~~~--~~~~~~-~~~~~~~~~ 236 (268)
-...+.|..+|+.. ++. ...+........++++++|+++++. ..+.|..+|.. ++.. .....+ ..+..+++.
T Consensus 185 d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~ 263 (306)
T 2p4o_A 185 NTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFG 263 (306)
T ss_dssp ETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEEEEEEC
T ss_pred eCCCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccccCCceEEEEe
Confidence 77778999999874 321 1112111235578999999887664 45789999975 3332 223333 345566666
Q ss_pred ---CCCCCEEEecc
Q 024372 237 ---PKLGNIFIAGG 247 (268)
Q Consensus 237 ---~~~~~~~~~gs 247 (268)
++.+.++++.+
T Consensus 264 g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 264 QTEGDCTAIYVVTN 277 (306)
T ss_dssp CSTTTTTEEEEEEC
T ss_pred cccCCCCEEEEECC
Confidence 43345555543
No 257
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.58 E-value=0.00023 Score=66.16 Aligned_cols=231 Identities=10% Similarity=0.129 Sum_probs=142.1
Q ss_pred eeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEe-eCccCcEEEEEecCCCcEEEEeeCCCcEEEEeCCCCCeee
Q 024372 19 VVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTF-EGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEKH 97 (268)
Q Consensus 19 v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~-~~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~ 97 (268)
|.++...+ +|.+. .++.++.+..|+..++++.... ..+...|.++...+++.+.+. ..++-+..||..++....
T Consensus 175 i~~i~~d~---~g~lw-igt~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwig-t~~~Gl~~~~~~~~~~~~ 249 (795)
T 4a2l_A 175 IASTLYRQ---GDQIY-IGTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTRIWVA-TEGAGLFLINPKTKEIKN 249 (795)
T ss_dssp CEEEEEEE---TTEEE-EEESSSCEEEEETTTCCEEECC----CCCEEEEEEEETTEEEEE-EBSSCEEEEETTTTEEEE
T ss_pred eEEEEECC---CCCEE-EEECCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCCEEEE-ECCCCeEEEeCCCCeEEE
Confidence 67777653 56544 4777666888998877654322 123457888888777776553 334448889987655433
Q ss_pred eec--------cCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEe--------cCCcccEEEEEEeCCCCcEE
Q 024372 98 SFE--------HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREV--------GNSSGSIRTVAWLHSDQTIL 161 (268)
Q Consensus 98 ~~~--------~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~--------~~~~~~v~~~~~~~~~~~~~ 161 (268)
... ....|.++...+++.+.+ |+.+ -+.+||...... ... ......|.++...+++ .+-
T Consensus 250 ~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~--~~~~~~~~~~~~l~~~~i~~i~~D~~g-~lW 324 (795)
T 4a2l_A 250 YLHSPSNPKSISSNYIRSLAMDSQNRLWI-GTFN-DLNIYHEGTDSF--ASYSSNPVENGSLSQRSVRSIFMDSQG-GMW 324 (795)
T ss_dssp ECCCTTCTTSCSCSBEEEEEECTTSCEEE-EESS-CEEEEETTTTEE--EEECCCTTSTTSCSSSCEEEEEECTTS-CEE
T ss_pred eecCCCCccccCCCeEEEEEEcCCCCEEE-EeCC-hhheEcCCCCeE--EEEecCCCCCCCCCCCcEEEEEEeCCc-CEE
Confidence 221 134689998888887655 4444 578888654321 111 1123468888766554 444
Q ss_pred EEeeCCCeEEEEeCCCCceEEeec-------CCCCEEEEEECCCCcEEEEeCCCeEEEEeCCCceeeeEEeC--------
Q 024372 162 SSCTDSGGVRLWDARSGKIVQTLE-------TKSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGYNM-------- 226 (268)
Q Consensus 162 ~~~~~d~~i~iwd~~~~~~~~~~~-------~~~~v~~~~~s~~g~~l~~~~~~~v~~wd~~~~~~~~~~~~-------- 226 (268)
.|+.++.|..|+..++....... ....|.++...++|++.++..++.|..||..+.. .+.+..
T Consensus 325 -igt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~-~~~~~~~~~~~~~~ 402 (795)
T 4a2l_A 325 -LGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQR-FTSYTLQEDESARG 402 (795)
T ss_dssp -EEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCEEEEESSSCEEEECTTTCC-EEEECCC------C
T ss_pred -EEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCCEEEEECCCCeEEEcCCCCc-EEEEecCCCCcccC
Confidence 34566789999976654322111 1345899999999999988888889999987543 222321
Q ss_pred -CCC-ceeeEEcCCCCCEEEeccCCCeEEEEECCCCcE
Q 024372 227 -PCN-TESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQ 262 (268)
Q Consensus 227 -~~~-~~~~~~~~~~~~~~~~gs~d~~i~~wd~~~g~~ 262 (268)
+.. +.++...+ .+..+..|+.++-|.+||.++++.
T Consensus 403 l~~~~v~~i~~d~-~g~~lWigt~~~Gl~~~d~~~~~~ 439 (795)
T 4a2l_A 403 IGSNNIKAVYVDE-KKSLVYIGTHAGGLSILHRNSGQV 439 (795)
T ss_dssp CSCSCEEEEEEET-TTTEEEEEETTTEEEEEETTTCCE
T ss_pred CCCccEEEEEEcC-CCCEEEEEeCcCceeEEeCCCCcE
Confidence 112 22333333 466466677766799999887664
No 258
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.58 E-value=6.4e-06 Score=75.23 Aligned_cols=190 Identities=11% Similarity=0.094 Sum_probs=118.5
Q ss_pred CCCeEEeeCCCCCeEEEeeCc---cC----------------------------cEEEEEecCCCcEEEEeeCCC-----
Q 024372 40 DSSPMLRNGETGDWIGTFEGH---KG----------------------------AVWSCCLDANALFSASGSADF----- 83 (268)
Q Consensus 40 d~~i~iw~~~~~~~~~~~~~h---~~----------------------------~V~~~~~~~~~~~l~s~s~D~----- 83 (268)
++.+..+|..+|+.+-++..- .. ....+++.++..+++.+..++
T Consensus 177 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~ 256 (668)
T 1kv9_A 177 RGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNR 256 (668)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCH
T ss_pred CCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCcccc
Confidence 578999999999987655421 00 011357777777776666655
Q ss_pred --------------cEEEEeCCCCCeeeeeccC----------CeEEEEEECCCCC---EEEEeeCCCeEEEEECCCCCC
Q 024372 84 --------------TAKLWDALTGDEKHSFEHK----------HIVRACAFSEDTH---LLLTGGFEKILRIFDLNRPDA 136 (268)
Q Consensus 84 --------------~v~iw~~~~~~~~~~~~~~----------~~v~~v~~~~~~~---~l~s~~~d~~i~~~d~~~~~~ 136 (268)
.|..+|..+++.+-.+... .+.....+..+++ .++.++.++.+.++|..+++.
T Consensus 257 ~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 336 (668)
T 1kv9_A 257 EVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKL 336 (668)
T ss_dssp HHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCE
T ss_pred CCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCE
Confidence 3899999999987776421 2222222233554 688899999999999877654
Q ss_pred CCeEecCC----------c-ccE------------------------EEEEEeCCCCcEEEEe-----------------
Q 024372 137 PPREVGNS----------S-GSI------------------------RTVAWLHSDQTILSSC----------------- 164 (268)
Q Consensus 137 ~~~~~~~~----------~-~~v------------------------~~~~~~~~~~~~~~~~----------------- 164 (268)
........ . .++ ..++++|+.+.+++..
T Consensus 337 l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~ 416 (668)
T 1kv9_A 337 ISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTR 416 (668)
T ss_dssp EEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCC
T ss_pred eccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccc
Confidence 31110000 0 000 0145555555443311
Q ss_pred ------------------eCCCeEEEEeCCCCceEEeecCCCCEEEEEECCCC-cEEEEeCCCeEEEEeCCCceeeeEEe
Q 024372 165 ------------------TDSGGVRLWDARSGKIVQTLETKSPVTSAEVSRDG-RYITTADGSSVKFWDANHFGLVKGYN 225 (268)
Q Consensus 165 ------------------~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~g-~~l~~~~~~~v~~wd~~~~~~~~~~~ 225 (268)
..+|.|.-||+.+++.+..++...+.....+...+ .+++++.++.++.||.++++.+..+.
T Consensus 417 ~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~ 496 (668)
T 1kv9_A 417 KAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFE 496 (668)
T ss_dssp SSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred cccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEECCcccchhhhhhcChhheEec
Confidence 12378999999999998776644443333333344 44455568999999999999998887
Q ss_pred CCCC
Q 024372 226 MPCN 229 (268)
Q Consensus 226 ~~~~ 229 (268)
.+..
T Consensus 497 ~~~~ 500 (668)
T 1kv9_A 497 AQSG 500 (668)
T ss_dssp CSSC
T ss_pred CCCC
Confidence 7643
No 259
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.47 E-value=0.00035 Score=57.19 Aligned_cols=204 Identities=10% Similarity=-0.011 Sum_probs=120.1
Q ss_pred CCeEEEeeCccCcEEEEEecCCCcEEEEeeCCCcEEEEeCCCCCeeeeeccCCeEEEEEECCCCCEEEEeeCC-C-eEEE
Q 024372 51 GDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFE-K-ILRI 128 (268)
Q Consensus 51 ~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~s~~~d-~-~i~~ 128 (268)
.+.+..|... .....+++++++.++++-..++.|..||... .....+........+++.++++++++.... + .+..
T Consensus 22 ~~~~~~~p~~-~~pegia~~~~g~lyv~d~~~~~I~~~d~~g-~~~~~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~ 99 (306)
T 2p4o_A 22 AKIITSFPVN-TFLENLASAPDGTIFVTNHEVGEIVSITPDG-NQQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVS 99 (306)
T ss_dssp EEEEEEECTT-CCEEEEEECTTSCEEEEETTTTEEEEECTTC-CEEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEE
T ss_pred ceEeEeCCCC-CCcceEEECCCCCEEEEeCCCCeEEEECCCC-ceEEEEeCCCCceeEEEcCCCcEEEEeccCCcceEEE
Confidence 3455566433 3566788999988777776788999999765 333444455678889999999976655432 2 4666
Q ss_pred EECCCCCCCCeEecC-CcccEEEEEEeCCCCcEEEEeeCCCeEEEEeCCCCce-EEee-------c---CCCCEEEEEEC
Q 024372 129 FDLNRPDAPPREVGN-SSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKI-VQTL-------E---TKSPVTSAEVS 196 (268)
Q Consensus 129 ~d~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~-~~~~-------~---~~~~v~~~~~s 196 (268)
+|..+++.. ..... .......++..+ +..++++....+.|..+|..+++. +... . .-...+.+ +
T Consensus 100 ~d~~~g~~~-~~~~~~~~~~~~g~~~~~-~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s 175 (306)
T 2p4o_A 100 LVKSDGTVE-TLLTLPDAIFLNGITPLS-DTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--K 175 (306)
T ss_dssp EECTTSCEE-EEEECTTCSCEEEEEESS-SSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--E
T ss_pred EcCCCCeEE-EEEeCCCccccCcccccC-CCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--C
Confidence 675544321 11111 111223334333 444555544568899999876532 2110 0 11235555 8
Q ss_pred CCCcEEEEe--CCCeEEEEeCCC-cee--eeEEeCCCCceeeEEcCCCCCEEEeccCCCeEEEEECCCCcE
Q 024372 197 RDGRYITTA--DGSSVKFWDANH-FGL--VKGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQ 262 (268)
Q Consensus 197 ~~g~~l~~~--~~~~v~~wd~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~gs~d~~i~~wd~~~g~~ 262 (268)
|+++++..+ ..+.|..+|+.. ... ...+.....+..+++.+ +|.++++-...+.|.++|.. |+.
T Consensus 176 ~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~-dG~l~va~~~~~~V~~~~~~-G~~ 244 (306)
T 2p4o_A 176 RFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDV-EGNLYGATHIYNSVVRIAPD-RST 244 (306)
T ss_dssp EETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBT-TCCEEEECBTTCCEEEECTT-CCE
T ss_pred cCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECC-CCCEEEEeCCCCeEEEECCC-CCE
Confidence 888655433 467899999864 221 22222112345566666 58888887777789999974 765
No 260
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.46 E-value=0.00036 Score=60.27 Aligned_cols=236 Identities=11% Similarity=0.064 Sum_probs=133.8
Q ss_pred CeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCC---Cc-EEEEeCCCC
Q 024372 18 PVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSAD---FT-AKLWDALTG 93 (268)
Q Consensus 18 ~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D---~~-v~iw~~~~~ 93 (268)
...+++|+|.+.+|.+.+ +...+.|+.++..+++... +.........+++++++.++++.... .. +...+....
T Consensus 140 ~P~gvavd~~s~~g~Lyv-~D~~~~I~~id~~~g~v~~-~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~ 217 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYW-VGQRDAFRHVDFVNQYVDI-KTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASG 217 (433)
T ss_dssp CCCEEEECTTTTTCEEEE-ECBTSCEEEEETTTTEEEE-ECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGT
T ss_pred CCceEEEccccCCCEEEE-EeCCCCEEEEECCCCEEEE-eecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCC
Confidence 345788875211355444 4333888889988776553 43344567889999999865554321 11 222222211
Q ss_pred Ce-eeeeccCCeEEEEEECC-CCCEEEEeeCCCeEEEEECCCCCCCCeEec-CCcccEEEEEEeCCCCcEEEEeeCCCeE
Q 024372 94 DE-KHSFEHKHIVRACAFSE-DTHLLLTGGFEKILRIFDLNRPDAPPREVG-NSSGSIRTVAWLHSDQTILSSCTDSGGV 170 (268)
Q Consensus 94 ~~-~~~~~~~~~v~~v~~~~-~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~d~~i 170 (268)
.. ...+........++++| ++.+.++-..++.|+.+|..++........ .....-..+++.|++..++++-...+.|
T Consensus 218 ~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I 297 (433)
T 4hw6_A 218 FTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCI 297 (433)
T ss_dssp TCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEE
T ss_pred eeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEE
Confidence 11 01111222335577899 777666666778899998764432111111 1122234689999887677776666899
Q ss_pred EEEeCC--CCce--EEeecC----------------CCCEEEEEE---------CCCCcEEEEe-CCCeEEEEeCCCcee
Q 024372 171 RLWDAR--SGKI--VQTLET----------------KSPVTSAEV---------SRDGRYITTA-DGSSVKFWDANHFGL 220 (268)
Q Consensus 171 ~iwd~~--~~~~--~~~~~~----------------~~~v~~~~~---------s~~g~~l~~~-~~~~v~~wd~~~~~~ 220 (268)
+.+|.. +++. ...+-. -.....+++ .++|.+.++- ..+.|+.++.. + .
T Consensus 298 ~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~~-G-~ 375 (433)
T 4hw6_A 298 YRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTPE-G-R 375 (433)
T ss_dssp EEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECTT-S-E
T ss_pred EEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECCC-C-C
Confidence 998764 3321 111110 123567999 7888777664 46789988853 3 3
Q ss_pred eeEEeCC-------------------CCceeeEEcCCCCCEEEeccCCCeEEEEEC
Q 024372 221 VKGYNMP-------------------CNTESASLEPKLGNIFIAGGEDMWVHVFDF 257 (268)
Q Consensus 221 ~~~~~~~-------------------~~~~~~~~~~~~~~~~~~gs~d~~i~~wd~ 257 (268)
+.++... ..+..+++.+..|.++++=..+..|+.++.
T Consensus 376 v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 431 (433)
T 4hw6_A 376 VTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAP 431 (433)
T ss_dssp EEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred EEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEec
Confidence 3333221 113455666445676666666677777664
No 261
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.46 E-value=0.00096 Score=62.02 Aligned_cols=232 Identities=11% Similarity=0.126 Sum_probs=143.0
Q ss_pred CCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeC-------ccCcEEEEEecCCCcEEEEeeCCCcEEEE
Q 024372 16 SRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEG-------HKGAVWSCCLDANALFSASGSADFTAKLW 88 (268)
Q Consensus 16 ~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~-------h~~~V~~~~~~~~~~~l~s~s~D~~v~iw 88 (268)
...|.++...+ +|.+. .|+.++-+..++..+++....... ....|.++...+++.+.+. ..+ -+.+|
T Consensus 214 ~~~i~~i~~d~---~g~lw-igt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWig-t~~-Gl~~~ 287 (795)
T 4a2l_A 214 TKQIQAILQQS---PTRIW-VATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWIG-TFN-DLNIY 287 (795)
T ss_dssp CCCEEEEEEEE---TTEEE-EEEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEEE-ESS-CEEEE
T ss_pred CCeeEEEEEcC---CCCEE-EEECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEEE-eCC-hhheE
Confidence 45677777653 56544 466555588899887765432221 1356999998888876543 334 58889
Q ss_pred eCCCCCeeeeec--------cCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEe-------cCCcccEEEEEE
Q 024372 89 DALTGDEKHSFE--------HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREV-------GNSSGSIRTVAW 153 (268)
Q Consensus 89 ~~~~~~~~~~~~--------~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~-------~~~~~~v~~~~~ 153 (268)
+..++....... ....|.++...+++.+- .|+.++-+..|+..... .... ......|.++..
T Consensus 288 ~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lW-igt~~~Gl~~~~~~~~~--~~~~~~~~~~~~l~~~~V~~i~~ 364 (795)
T 4a2l_A 288 HEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMW-LGTYFGGLNYYHPIRNR--FKNIRNIPYKNSLSDNVVSCIVE 364 (795)
T ss_dssp ETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEE-EEESSSCEEEECGGGGS--SEEECCCTTSSSCSCSSEEEEEE
T ss_pred cCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEE-EEECCCCeEEeCCCccc--ceEEcCCCCCCCCCCCeeEEEEE
Confidence 987665433221 22468999889888755 46666677888764322 1111 112345888876
Q ss_pred eCCCCcEEEEeeCCCeEEEEeCCCCceEEeec---------CCCCEEEEEECCCCc-EEEEeCCCeEEEEeCCCceeeeE
Q 024372 154 LHSDQTILSSCTDSGGVRLWDARSGKIVQTLE---------TKSPVTSAEVSRDGR-YITTADGSSVKFWDANHFGLVKG 223 (268)
Q Consensus 154 ~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~---------~~~~v~~~~~s~~g~-~l~~~~~~~v~~wd~~~~~~~~~ 223 (268)
.+++ .+-+ |+.++.|..||..+++..+... ....|.++...++|+ +.++..++.|..+|.++.+ .+.
T Consensus 365 d~~g-~lWi-Gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~-~~~ 441 (795)
T 4a2l_A 365 DKDK-NLWI-GTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQ-VEN 441 (795)
T ss_dssp CTTS-CEEE-EESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCC-EEE
T ss_pred CCCC-CEEE-EECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCc-EEE
Confidence 6544 4443 5666789999998776544321 124588999999999 7777777789999987654 333
Q ss_pred EeC-----CC-CceeeEEcCCCCCEEEeccCCCeEEEEECCCCcE
Q 024372 224 YNM-----PC-NTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQ 262 (268)
Q Consensus 224 ~~~-----~~-~~~~~~~~~~~~~~~~~gs~d~~i~~wd~~~g~~ 262 (268)
+.. +. .+.++...+ .|.+.+.. .++ +++||.++++.
T Consensus 442 ~~~~~~~l~~~~v~~i~~d~-~g~lwigt-~~G-l~~~~~~~~~~ 483 (795)
T 4a2l_A 442 FNQRNSQLVNENVYAILPDG-EGNLWLGT-LSA-LVRFNPEQRSF 483 (795)
T ss_dssp ECTTTSCCSCSCEEEEEECS-SSCEEEEE-SSC-EEEEETTTTEE
T ss_pred eecCCCCcCCCeeEEEEECC-CCCEEEEe-cCc-eeEEeCCCCeE
Confidence 332 11 223333333 46654443 344 88899876654
No 262
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.42 E-value=4.4e-05 Score=69.55 Aligned_cols=111 Identities=15% Similarity=0.116 Sum_probs=70.0
Q ss_pred eEEEecCCCCCcEEEEEeCCC-----------CeEEeeCCCCCeEE--EeeC-ccCcEEEEEecCCCcEEEEee-CCCcE
Q 024372 21 DLFYSPITPDGFFLVSASKDS-----------SPMLRNGETGDWIG--TFEG-HKGAVWSCCLDANALFSASGS-ADFTA 85 (268)
Q Consensus 21 ~~~f~~~~~dg~~l~s~s~d~-----------~i~iw~~~~~~~~~--~~~~-h~~~V~~~~~~~~~~~l~s~s-~D~~v 85 (268)
++++.| .+|++++.|+.+. .+.+||..++++.. .+.. +.....++++..++.+++.|+ .+..+
T Consensus 190 ~~av~~--~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v 267 (656)
T 1k3i_A 190 AAAIEP--TSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKT 267 (656)
T ss_dssp EEEEET--TTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCE
T ss_pred eEEEEe--cCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCce
Confidence 445543 2788888887654 46789999887542 2322 223333456778899888888 45689
Q ss_pred EEEeCCCCCeeeee--ccCCeEEEEEECCCCCEEEEee-CC-----CeEEEEECCC
Q 024372 86 KLWDALTGDEKHSF--EHKHIVRACAFSEDTHLLLTGG-FE-----KILRIFDLNR 133 (268)
Q Consensus 86 ~iw~~~~~~~~~~~--~~~~~v~~v~~~~~~~~l~s~~-~d-----~~i~~~d~~~ 133 (268)
.+||..++.-.... .....-.++...+++++++.|+ .+ ..+.+||..+
T Consensus 268 ~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t 323 (656)
T 1k3i_A 268 SLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSS 323 (656)
T ss_dssp EEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTT
T ss_pred EEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCC
Confidence 99998765422221 1111123445567899999988 44 5688888754
No 263
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.42 E-value=0.00062 Score=57.78 Aligned_cols=205 Identities=7% Similarity=-0.129 Sum_probs=121.3
Q ss_pred CeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCC-cEEEEeeCCCcEEEEeCCCCCee
Q 024372 18 PVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANA-LFSASGSADFTAKLWDALTGDEK 96 (268)
Q Consensus 18 ~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~-~~l~s~s~D~~v~iw~~~~~~~~ 96 (268)
...+++|++ .++.+..+-...+.|..++...+.....+.........+++.+.+ .+.++-...+.|.+.++......
T Consensus 117 ~~~gl~~d~--~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~ 194 (386)
T 3v65_B 117 NAIALDFHH--RRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRK 194 (386)
T ss_dssp CEEEEEEET--TTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCE
T ss_pred ccEEEEEec--CCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceE
Confidence 455788875 245555555666777777776554333333222334567787644 44456666778888887654433
Q ss_pred eeecc-CCeEEEEEECCCCCEEEEee-CC-CeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEeeCCCeEEEE
Q 024372 97 HSFEH-KHIVRACAFSEDTHLLLTGG-FE-KILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLW 173 (268)
Q Consensus 97 ~~~~~-~~~v~~v~~~~~~~~l~s~~-~d-~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~iw 173 (268)
..+.. ....+.+++.|.+..|+.+. .. +.|..+++... ...............+++.+.++.++.+-...+.|..+
T Consensus 195 ~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~-~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~ 273 (386)
T 3v65_B 195 VLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS-GRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERA 273 (386)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-SCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEE
T ss_pred EeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCC-CcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEE
Confidence 33322 23567888998665555443 33 67888887532 22222222233467899988888888777777899999
Q ss_pred eCCCCceEEeec-CCCCEEEEEECCCCcEEEEeCCCeEEEEeCCCceeeeEEe
Q 024372 174 DARSGKIVQTLE-TKSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGYN 225 (268)
Q Consensus 174 d~~~~~~~~~~~-~~~~v~~~~~s~~g~~l~~~~~~~v~~wd~~~~~~~~~~~ 225 (268)
|+........+. .......+++..+.-|++-...+.|..+|..+++.+..+.
T Consensus 274 d~dG~~~~~~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~~~i~ 326 (386)
T 3v65_B 274 NLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIR 326 (386)
T ss_dssp CTTSCSCEEEECSSCSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred eCCCCeeEEEEECCCCCceEEEEECCEEEEeeCCCCeEEEEECCCCcceEEEc
Confidence 987543332232 2234678888444334443456788888865554444443
No 264
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.41 E-value=0.00011 Score=60.51 Aligned_cols=195 Identities=12% Similarity=0.055 Sum_probs=114.2
Q ss_pred EEEEEecCCCcEEEEeeCCCcEEEEeCCCCCeeeeec--------------------cCCeEEEEEECC-CCCEEEEeeC
Q 024372 64 VWSCCLDANALFSASGSADFTAKLWDALTGDEKHSFE--------------------HKHIVRACAFSE-DTHLLLTGGF 122 (268)
Q Consensus 64 V~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~--------------------~~~~v~~v~~~~-~~~~l~s~~~ 122 (268)
-..+++.+++.++.++..++.|..|+..++....... .......+++.+ +++++ .+..
T Consensus 21 p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~-v~d~ 99 (322)
T 2fp8_A 21 PNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLY-IVDC 99 (322)
T ss_dssp CCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEE-EEET
T ss_pred ceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEE-EEEC
Confidence 3456688888766677788889999877654322110 012467788987 66544 4444
Q ss_pred CCeEEEEECCCCCCCCeEecC-----CcccEEEEEEeC-CCCcEEEEeeC-----------------CCeEEEEeCCCCc
Q 024372 123 EKILRIFDLNRPDAPPREVGN-----SSGSIRTVAWLH-SDQTILSSCTD-----------------SGGVRLWDARSGK 179 (268)
Q Consensus 123 d~~i~~~d~~~~~~~~~~~~~-----~~~~v~~~~~~~-~~~~~~~~~~~-----------------d~~i~iwd~~~~~ 179 (268)
.+.+..+|...+.. ..+.. .......++..+ ++. +.++... ++.|..+|..+++
T Consensus 100 ~~~i~~~d~~~g~~--~~~~~~~~~~~~~~p~~i~~d~~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~ 176 (322)
T 2fp8_A 100 YYHLSVVGSEGGHA--TQLATSVDGVPFKWLYAVTVDQRTGI-VYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKE 176 (322)
T ss_dssp TTEEEEECTTCEEC--EEEESEETTEECSCEEEEEECTTTCC-EEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTE
T ss_pred CCCEEEEeCCCCEE--EEecccCCCCcccccceEEEecCCCE-EEEECCcccccccccceehcccCCCceEEEEeCCCCE
Confidence 45578888653321 11110 112356678777 654 4444221 3678899988776
Q ss_pred eEEeecCCCCEEEEEECCCCcEE-EEe-CCCeEEEEeCCCc--eeeeEE-eCCCCceeeEEcCCCCCEEEeccC------
Q 024372 180 IVQTLETKSPVTSAEVSRDGRYI-TTA-DGSSVKFWDANHF--GLVKGY-NMPCNTESASLEPKLGNIFIAGGE------ 248 (268)
Q Consensus 180 ~~~~~~~~~~v~~~~~s~~g~~l-~~~-~~~~v~~wd~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~gs~------ 248 (268)
.......-...+.++++|+|+++ ++. ..+.|..+|+... ...+.+ ..+. +..+++.+ +|.++++...
T Consensus 177 ~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~-~G~l~va~~~~~~~~~ 254 (322)
T 2fp8_A 177 TTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNA-DGHFWVSSSEELDGNM 254 (322)
T ss_dssp EEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECT-TSCEEEEEEEETTSST
T ss_pred EEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECC-CCCEEEEecCcccccc
Confidence 53332222335689999999854 443 4578999988642 112222 2222 45556666 5787776544
Q ss_pred ----CCeEEEEECCCCcEEee
Q 024372 249 ----DMWVHVFDFHTGEQIAI 265 (268)
Q Consensus 249 ----d~~i~~wd~~~g~~~~~ 265 (268)
.+.|..+|. .|+.+..
T Consensus 255 ~~~~~~~v~~~d~-~G~~~~~ 274 (322)
T 2fp8_A 255 HGRVDPKGIKFDE-FGNILEV 274 (322)
T ss_dssp TSCEEEEEEEECT-TSCEEEE
T ss_pred cCCCccEEEEECC-CCCEEEE
Confidence 466888886 4776654
No 265
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.36 E-value=8.6e-05 Score=66.49 Aligned_cols=160 Identities=16% Similarity=0.131 Sum_probs=97.5
Q ss_pred cEEEEeCCCCCeeeeeccC-----------CeEEEEEECCCCC---EEEEeeCCCeEEEEECCCCCCCCeEecCC-----
Q 024372 84 TAKLWDALTGDEKHSFEHK-----------HIVRACAFSEDTH---LLLTGGFEKILRIFDLNRPDAPPREVGNS----- 144 (268)
Q Consensus 84 ~v~iw~~~~~~~~~~~~~~-----------~~v~~v~~~~~~~---~l~s~~~d~~i~~~d~~~~~~~~~~~~~~----- 144 (268)
.|..+|..+++.+-.+... .++. +....+++ .++.++.++.+..+|..+++.........
T Consensus 273 ~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~ 351 (571)
T 2ad6_A 273 TIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVF 351 (571)
T ss_dssp EEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSE
T ss_pred EEEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCcccc
Confidence 5899999999987766421 2222 22224663 67778889999999987765432221111
Q ss_pred ------c-ccE--------------------------EEEEEeCCCCcEEEEee--------------------------
Q 024372 145 ------S-GSI--------------------------RTVAWLHSDQTILSSCT-------------------------- 165 (268)
Q Consensus 145 ------~-~~v--------------------------~~~~~~~~~~~~~~~~~-------------------------- 165 (268)
. .++ ..++++|+.+.+++...
T Consensus 352 ~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~ 431 (571)
T 2ad6_A 352 KKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAM 431 (571)
T ss_dssp EEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEE
T ss_pred ccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCcccccccee
Confidence 0 011 12456666655544431
Q ss_pred ----------CCCeEEEEeCCCCceEEeecCCCCEEEEE-ECCCCcEEEEeCCCeEEEEeCCCceeeeEEeCCCCcee--
Q 024372 166 ----------DSGGVRLWDARSGKIVQTLETKSPVTSAE-VSRDGRYITTADGSSVKFWDANHFGLVKGYNMPCNTES-- 232 (268)
Q Consensus 166 ----------~d~~i~iwd~~~~~~~~~~~~~~~v~~~~-~s~~g~~l~~~~~~~v~~wd~~~~~~~~~~~~~~~~~~-- 232 (268)
.++.|..||+++++.+.+++...++.... ...++.+++++.++.|+.+|.++++.+..+........
T Consensus 432 ~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p 511 (571)
T 2ad6_A 432 YPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSP 511 (571)
T ss_dssp EECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCC
T ss_pred ccCccccCCCCCCeEEEEECCCCCEEEEecCCCCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeee
Confidence 34789999999999987776433332222 23455566666789999999999999988887544322
Q ss_pred eEEcCCCCCEEEe
Q 024372 233 ASLEPKLGNIFIA 245 (268)
Q Consensus 233 ~~~~~~~~~~~~~ 245 (268)
..+.. +|++++.
T Consensus 512 ~~~~~-~G~~yv~ 523 (571)
T 2ad6_A 512 MTYSF-KGKQYIG 523 (571)
T ss_dssp EEEEE-TTEEEEE
T ss_pred EEEEE-CCEEEEE
Confidence 22223 4665553
No 266
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.36 E-value=0.00086 Score=56.92 Aligned_cols=223 Identities=8% Similarity=-0.091 Sum_probs=135.4
Q ss_pred CCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCC-cEEEEeeCCCcEEEEeCCCCCeeeeeccC-CeEEEEEECCC-CC
Q 024372 39 KDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANA-LFSASGSADFTAKLWDALTGDEKHSFEHK-HIVRACAFSED-TH 115 (268)
Q Consensus 39 ~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~-~~l~s~s~D~~v~iw~~~~~~~~~~~~~~-~~v~~v~~~~~-~~ 115 (268)
....|+..+...++....+.+. .....++|.+.+ .++.+-...+.|+.++.........+... .....+++.+. ++
T Consensus 94 ~~~~I~~i~~~~~~~~~~~~~~-~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ 172 (386)
T 3v65_B 94 NRIDIRQVLPHRSEYTLLLNNL-ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDK 172 (386)
T ss_dssp CBSCEEEECTTSCCCEEEECSC-SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTE
T ss_pred cCccceeeccCCCcEEEEecCC-CccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCe
Confidence 3456777777766554444433 456789998654 45556567788999998766543333221 23456778874 44
Q ss_pred EEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEeeCC-CeEEEEeCCCCceEEeec-CCCCEEEE
Q 024372 116 LLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDS-GGVRLWDARSGKIVQTLE-TKSPVTSA 193 (268)
Q Consensus 116 ~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d-~~i~iwd~~~~~~~~~~~-~~~~v~~~ 193 (268)
+.++-...+.|.+.++.... ..............+++.|.++.++.+-... +.|...++.......... .-...+.+
T Consensus 173 lY~~d~~~~~I~~~~~dg~~-~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGl 251 (386)
T 3v65_B 173 LYWTDSGTSRIEVANLDGAH-RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGL 251 (386)
T ss_dssp EEEEETTTTEEEECBTTSCS-CEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEE
T ss_pred EEEEcCCCCeEEEEeCCCCc-eEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeE
Confidence 44555566788888875322 2222222224567888888888887776555 678888886443333222 23347899
Q ss_pred EECCCCcEE-EE-eCCCeEEEEeCCCceeeeEEeC-CCCceeeEEcCCCCCEEEeccCCCeEEEEECCCCcEEee
Q 024372 194 EVSRDGRYI-TT-ADGSSVKFWDANHFGLVKGYNM-PCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIAI 265 (268)
Q Consensus 194 ~~s~~g~~l-~~-~~~~~v~~wd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~gs~d~~i~~wd~~~g~~~~~ 265 (268)
+++|++..| .+ +..+.|..+|+........... ...+..+++. .+.++++-...+.|..+|..+|+.+.+
T Consensus 252 avd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav~--~~~ly~td~~~~~V~~~~~~~G~~~~~ 324 (386)
T 3v65_B 252 TIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF--EDSLYWTDWHTKSINSANKFTGKNQEI 324 (386)
T ss_dssp EEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCCSCEE
T ss_pred EEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEEE--CCEEEEeeCCCCeEEEEECCCCcceEE
Confidence 999866544 34 3457899999864322222221 1234455552 477788877888899998666665443
No 267
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.31 E-value=8.4e-05 Score=68.78 Aligned_cols=194 Identities=8% Similarity=0.005 Sum_probs=108.4
Q ss_pred cEEEEEec-CCCcEEEEee-CC----CcEEEEeCCCC-CeeeeeccCCeEEEEEECCCCCEEEEeeCC-----CeEEEEE
Q 024372 63 AVWSCCLD-ANALFSASGS-AD----FTAKLWDALTG-DEKHSFEHKHIVRACAFSEDTHLLLTGGFE-----KILRIFD 130 (268)
Q Consensus 63 ~V~~~~~~-~~~~~l~s~s-~D----~~v~iw~~~~~-~~~~~~~~~~~v~~v~~~~~~~~l~s~~~d-----~~i~~~d 130 (268)
.+...+|+ |||+++|-+. .+ .+|+++|+.++ +.+.. ........+.|+||++.|+....+ ..|..++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~-~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~ 253 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD-KVSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHV 253 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC-CEEEECSCCEECSSTTEEEEEEECTTCCEEEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc-cccCceeeEEEecCCCEEEEEEECCCCCCCEEEEEE
Confidence 57788999 9999877432 22 35999999888 53211 001123457899999888776655 3577778
Q ss_pred CCCCCCCCeEe-c-CCcccEEEEEEeCCCCcEEEEeeC--CCeEEEEeCCCCc-eE--Eee-cC-CCCEEEEEECCCCcE
Q 024372 131 LNRPDAPPREV-G-NSSGSIRTVAWLHSDQTILSSCTD--SGGVRLWDARSGK-IV--QTL-ET-KSPVTSAEVSRDGRY 201 (268)
Q Consensus 131 ~~~~~~~~~~~-~-~~~~~v~~~~~~~~~~~~~~~~~~--d~~i~iwd~~~~~-~~--~~~-~~-~~~v~~~~~s~~g~~ 201 (268)
+.++....... . ........+.|+|++..++.+... ...|.++|+.++. .. ..+ .. .....++.++.++.+
T Consensus 254 lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l 333 (751)
T 2xe4_A 254 MGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHL 333 (751)
T ss_dssp TTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTEE
T ss_pred CCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCEE
Confidence 76543211121 1 222345677899999887766543 2468889998752 22 333 22 233455555555555
Q ss_pred EEEeC-C----CeEEEEeCCCc-eeee-EEeCCCCceeeEEcCCCCCEEEeccCCCe--EEEEEC
Q 024372 202 ITTAD-G----SSVKFWDANHF-GLVK-GYNMPCNTESASLEPKLGNIFIAGGEDMW--VHVFDF 257 (268)
Q Consensus 202 l~~~~-~----~~v~~wd~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~gs~d~~--i~~wd~ 257 (268)
++.++ + ..|..+|+.+. .... .+..........+....+.++++...|+. |+++|.
T Consensus 334 ~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 334 VILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp EEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEEETTEEEEEEEEC
T ss_pred EEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEECCEEEEEEEeCCEEEEEEEec
Confidence 55443 2 25777777642 1111 12222221222233323555666667764 566664
No 268
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.25 E-value=0.00077 Score=60.44 Aligned_cols=78 Identities=19% Similarity=0.209 Sum_probs=52.2
Q ss_pred CCeEEEEeCCCCceEEeecCCCCEEE-EEECCCCcEEEEeCCCeEEEEeCCCceeeeEEeCCCCcee--eEEcCCCCCEE
Q 024372 167 SGGVRLWDARSGKIVQTLETKSPVTS-AEVSRDGRYITTADGSSVKFWDANHFGLVKGYNMPCNTES--ASLEPKLGNIF 243 (268)
Q Consensus 167 d~~i~iwd~~~~~~~~~~~~~~~v~~-~~~s~~g~~l~~~~~~~v~~wd~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 243 (268)
+|.|.-||+.+++.+.......++.. .....++..++++.|+.++.||.++++.+-.+..+..... ..+.. +|+++
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~-~G~qY 543 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQ-DGEQY 543 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEE-TTEEE
T ss_pred cceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEE-CCEEE
Confidence 58899999999998876654333222 1223455555566789999999999999998887655432 33333 56654
Q ss_pred Ee
Q 024372 244 IA 245 (268)
Q Consensus 244 ~~ 245 (268)
++
T Consensus 544 v~ 545 (582)
T 1flg_A 544 LG 545 (582)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 269
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.24 E-value=0.0015 Score=54.60 Aligned_cols=199 Identities=8% Similarity=-0.104 Sum_probs=117.4
Q ss_pred eeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCC-CcEEEEeeCCCcEEEEeCCCCCeee
Q 024372 19 VVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDAN-ALFSASGSADFTAKLWDALTGDEKH 97 (268)
Q Consensus 19 v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~-~~~l~s~s~D~~v~iw~~~~~~~~~ 97 (268)
..+++|++ .++.+..+-...+.|..++...+.....+.........+++.+. +.+..+-...+.|.+.++.......
T Consensus 75 ~~~l~~d~--~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~ 152 (349)
T 3v64_C 75 AIALDFHH--RRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKV 152 (349)
T ss_dssp EEEEEEET--TTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred eEEEEEec--cccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEE
Confidence 45777775 24555555556667777776655433333322234467788864 4455666667889999886544333
Q ss_pred eec-cCCeEEEEEECCCCCEEE-EeeCC-CeEEEEECCCCCCCCeEe-cCCcccEEEEEEeCCCCcEEEEeeCCCeEEEE
Q 024372 98 SFE-HKHIVRACAFSEDTHLLL-TGGFE-KILRIFDLNRPDAPPREV-GNSSGSIRTVAWLHSDQTILSSCTDSGGVRLW 173 (268)
Q Consensus 98 ~~~-~~~~v~~v~~~~~~~~l~-s~~~d-~~i~~~d~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~iw 173 (268)
.+. .....+.++++|.+..++ +-... +.|..+++.... ...+ .........+++.+.++.++.+-...+.|..+
T Consensus 153 l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~--~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~ 230 (349)
T 3v64_C 153 LLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG--RRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERA 230 (349)
T ss_dssp EECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS--CEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCC--cEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEE
Confidence 332 223467889998555444 44444 678888875321 1222 11223457899998888888777777899999
Q ss_pred eCCCCceEEeec-CCCCEEEEEECCCCcEEEEeCCCeEEEEeCCCceee
Q 024372 174 DARSGKIVQTLE-TKSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLV 221 (268)
Q Consensus 174 d~~~~~~~~~~~-~~~~v~~~~~s~~g~~l~~~~~~~v~~wd~~~~~~~ 221 (268)
|+........+. .......+++..+.-|++-...+.|...|..+++.+
T Consensus 231 ~~dG~~~~~~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~ 279 (349)
T 3v64_C 231 NLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQ 279 (349)
T ss_dssp ETTSCSCEEEECSSCSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSC
T ss_pred eCCCCceEEEEeCCCCCceEEEEECCEEEEecCCCCeEEEEEccCCCcc
Confidence 987543222232 223467788844333333345678888885444433
No 270
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.24 E-value=0.0019 Score=55.68 Aligned_cols=235 Identities=10% Similarity=0.043 Sum_probs=130.0
Q ss_pred CeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEE-EEeeCCC----cEEEEeCCC
Q 024372 18 PVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFS-ASGSADF----TAKLWDALT 92 (268)
Q Consensus 18 ~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l-~s~s~D~----~v~iw~~~~ 92 (268)
....++++|. ++..|..+...+.|+.+|...++.. .+.........+++++++.++ ++...++ .+...+...
T Consensus 138 ~P~~lavdp~--~~g~Lyv~d~~~~I~~id~~~~~v~-~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g 214 (430)
T 3tc9_A 138 GAVWLSFDPK--NHNHLYLVGEQHPTRLIDFEKEYVS-TVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRES 214 (430)
T ss_dssp CCCEEEEETT--EEEEEEEEEBTEEEEEEETTTTEEE-EEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGG
T ss_pred CCCEEEECCC--CCCeEEEEeCCCcEEEEECCCCEEE-EEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCC
Confidence 3457788741 2334555555477888888776544 343344567889999999844 4443222 233333322
Q ss_pred CCe-eeeeccCCeEEEEEECC-CCCEEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEeeCCCeE
Q 024372 93 GDE-KHSFEHKHIVRACAFSE-DTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGV 170 (268)
Q Consensus 93 ~~~-~~~~~~~~~v~~v~~~~-~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i 170 (268)
... ...+........++++| ++.++++-..++.|..++.................-..+++.|++..++++....+.|
T Consensus 215 ~~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I 294 (430)
T 3tc9_A 215 GFKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYI 294 (430)
T ss_dssp TSCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEE
T ss_pred ceeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEE
Confidence 111 12222222345677899 7777777667788999998643221111111123456789999887677776667899
Q ss_pred EEEeCCC--Cce--EEeecC----------------CCCEE-EEEEC--------CCCcEEEEe-CCCeEEEEeCCCcee
Q 024372 171 RLWDARS--GKI--VQTLET----------------KSPVT-SAEVS--------RDGRYITTA-DGSSVKFWDANHFGL 220 (268)
Q Consensus 171 ~iwd~~~--~~~--~~~~~~----------------~~~v~-~~~~s--------~~g~~l~~~-~~~~v~~wd~~~~~~ 220 (268)
..++... ++. +.++.. -.... .+++. ++|.+.++- ..+.|+.+|.. +.
T Consensus 295 ~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~~~-G~- 372 (430)
T 3tc9_A 295 LRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTPQ-GR- 372 (430)
T ss_dssp EEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEECTT-SE-
T ss_pred EEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEECCC-Cc-
Confidence 9987653 221 111110 01123 55653 456666664 45788888843 32
Q ss_pred eeEEeCC-------------------CCceeeEEcCCCCCEEEeccCCCeEEEEEC
Q 024372 221 VKGYNMP-------------------CNTESASLEPKLGNIFIAGGEDMWVHVFDF 257 (268)
Q Consensus 221 ~~~~~~~-------------------~~~~~~~~~~~~~~~~~~gs~d~~i~~wd~ 257 (268)
+.++... ..+..+++.+..+.++++-..+..|+.++.
T Consensus 373 v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 428 (430)
T 3tc9_A 373 VTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGY 428 (430)
T ss_dssp EEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred EEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEcc
Confidence 3333211 023455566544666666666777777764
No 271
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.21 E-value=0.0016 Score=53.62 Aligned_cols=219 Identities=7% Similarity=-0.088 Sum_probs=131.9
Q ss_pred CCeEEeeCCCCCeEEEeeCccCcEEEEEecCCC-cEEEEeeCCCcEEEEeCCC----CCeeeeecc-CCeEEEEEECCCC
Q 024372 41 SSPMLRNGETGDWIGTFEGHKGAVWSCCLDANA-LFSASGSADFTAKLWDALT----GDEKHSFEH-KHIVRACAFSEDT 114 (268)
Q Consensus 41 ~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~-~~l~s~s~D~~v~iw~~~~----~~~~~~~~~-~~~v~~v~~~~~~ 114 (268)
..|+..+....+....+.. -.....++|++.+ .+..+-...+.|+.+++.. ......+.. -.....+++.+.+
T Consensus 10 ~~I~~i~~~~~~~~~~~~~-~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~ 88 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIH 88 (316)
T ss_dssp SSEEEEETTSCCCEEEECS-CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTT
T ss_pred CeEEEEECCCcceEehhcC-CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecC
Confidence 4567777776665544432 3456788998765 4556666778999999875 222222221 1234678888644
Q ss_pred -CEEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEeeCC-CeEEEEeCCCCceEEee-c-CCCCE
Q 024372 115 -HLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDS-GGVRLWDARSGKIVQTL-E-TKSPV 190 (268)
Q Consensus 115 -~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d-~~i~iwd~~~~~~~~~~-~-~~~~v 190 (268)
++.++-...+.|.++++.... ..............++..|.++.++.+.... +.|...++.. +....+ . .-...
T Consensus 89 ~~ly~~d~~~~~I~~~~~~g~~-~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG-~~~~~~~~~~~~~P 166 (316)
T 1ijq_A 89 SNIYWTDSVLGTVSVADTKGVK-RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDIYSLVTENIQWP 166 (316)
T ss_dssp TEEEEEETTTTEEEEEETTSSS-EEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-CCEEEEECSSCSCE
T ss_pred CeEEEEECCCCEEEEEeCCCCc-eEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCC-CCeEEEEECCCCCc
Confidence 444555667889999976322 1112222223567888888788777776543 6788888753 333333 2 22457
Q ss_pred EEEEECCCCcEE-EEe-CCCeEEEEeCCCceeeeEE-eC---CCCceeeEEcCCCCCEEEeccCCCeEEEEECCCCcEEe
Q 024372 191 TSAEVSRDGRYI-TTA-DGSSVKFWDANHFGLVKGY-NM---PCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIA 264 (268)
Q Consensus 191 ~~~~~s~~g~~l-~~~-~~~~v~~wd~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~gs~d~~i~~wd~~~g~~~~ 264 (268)
+.++++|++..| .+. ..+.|..+|+.... .+.+ .. ...+..+++. .+.++++-...+.|..+|..+|+.+.
T Consensus 167 ~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~-~~~~~~~~~~~~~P~giav~--~~~ly~~d~~~~~V~~~~~~~g~~~~ 243 (316)
T 1ijq_A 167 NGITLDLLSGRLYWVDSKLHSISSIDVNGGN-RKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGSDVN 243 (316)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCCCCE
T ss_pred eEEEEeccCCEEEEEECCCCeEEEEecCCCc-eEEEeecCCccCCcEEEEEE--CCEEEEEECCCCeEEEEeCCCCcceE
Confidence 899999876554 343 45789999986422 2222 21 1234455553 47778887788899999987777554
Q ss_pred e
Q 024372 265 I 265 (268)
Q Consensus 265 ~ 265 (268)
+
T Consensus 244 ~ 244 (316)
T 1ijq_A 244 L 244 (316)
T ss_dssp E
T ss_pred E
Confidence 4
No 272
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.18 E-value=0.0024 Score=59.16 Aligned_cols=232 Identities=13% Similarity=0.082 Sum_probs=140.6
Q ss_pred CCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEee---------CccCcEEEEEecCCCcEEEEeeCCCcEE
Q 024372 16 SRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFE---------GHKGAVWSCCLDANALFSASGSADFTAK 86 (268)
Q Consensus 16 ~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~---------~h~~~V~~~~~~~~~~~l~s~s~D~~v~ 86 (268)
...|.++...+ +|. |-.|+.++-+..++..++.+..... .....|.++...+++.+. .|..++-+.
T Consensus 312 ~~~v~~i~~D~---~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lW-igt~~~Gl~ 386 (781)
T 3v9f_A 312 NASARYIFQDS---FNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLW-IGTDGGGIN 386 (781)
T ss_dssp SSCEEEEEECS---SCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEE-EEEBSSCEE
T ss_pred CCeEEEEEEeC---CCC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEE-EEeCCCcEE
Confidence 45678887763 565 5568888888888887665432210 123568999888877654 345456688
Q ss_pred EEeCCCCCeeeee----ccCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEe---cCCcccEEEEEEeCCCCc
Q 024372 87 LWDALTGDEKHSF----EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREV---GNSSGSIRTVAWLHSDQT 159 (268)
Q Consensus 87 iw~~~~~~~~~~~----~~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~ 159 (268)
.++..++...... .....|.++...+++.+.+ |+.++-+..+|..++. .... ......|.++...+++ .
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~--~~~~~~~~~~~~~v~~i~~d~~g-~ 462 (781)
T 3v9f_A 387 VFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKK--FQIIELEKNELLDVRVFYEDKNK-K 462 (781)
T ss_dssp EEETTEEEEECC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCE--EEECCSTTTCCCCEEEEEECTTS-E
T ss_pred EEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCc--EEEeccCCCCCCeEEEEEECCCC-C
Confidence 8887654322211 1234688888888887655 6666668888865432 1111 1123567887765544 4
Q ss_pred EEEEeeCCCeEEEEeCCCCceEEeecC------CCCEEEEEECCCCcEEEEeCCCeEEEEeCCCceeeeEEeCC----CC
Q 024372 160 ILSSCTDSGGVRLWDARSGKIVQTLET------KSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGYNMP----CN 229 (268)
Q Consensus 160 ~~~~~~~d~~i~iwd~~~~~~~~~~~~------~~~v~~~~~s~~g~~l~~~~~~~v~~wd~~~~~~~~~~~~~----~~ 229 (268)
+.+ ++. +.|..+|..+++....... ...+.++...++|++.+++.++.+..+|.+..+ ++.+... ..
T Consensus 463 lwi-gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~-~~~~~~~~~l~~~ 539 (781)
T 3v9f_A 463 IWI-GTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQL-VRKFNQYEGFCSN 539 (781)
T ss_dssp EEE-EET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTTCCE-EEEECTTTTCSCS
T ss_pred EEE-EEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCCe-EEEccCCCCCCCC
Confidence 443 345 6799999987765433221 246899999999999888775567788876543 3344322 12
Q ss_pred -ceeeEEcCCCCCEEEeccCCCeEEEEECCCCc
Q 024372 230 -TESASLEPKLGNIFIAGGEDMWVHVFDFHTGE 261 (268)
Q Consensus 230 -~~~~~~~~~~~~~~~~gs~d~~i~~wd~~~g~ 261 (268)
+.++...+ .|.+.+ |+.+|.|..||.++++
T Consensus 540 ~i~~i~~d~-~g~lWi-~T~~Glv~~~d~~~~~ 570 (781)
T 3v9f_A 540 TINQIYRSS-KGQMWL-ATGEGLVCFPSARNFD 570 (781)
T ss_dssp CEEEEEECT-TSCEEE-EETTEEEEESCTTTCC
T ss_pred eeEEEEECC-CCCEEE-EECCCceEEECCCCCc
Confidence 22333333 466444 4446665888877654
No 273
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.15 E-value=0.0027 Score=54.08 Aligned_cols=223 Identities=6% Similarity=-0.088 Sum_probs=133.8
Q ss_pred CCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCc-EEEEeeCCCcEEEEeCCCC----Ceeeeec-cCCeEEEEEECC
Q 024372 39 KDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANAL-FSASGSADFTAKLWDALTG----DEKHSFE-HKHIVRACAFSE 112 (268)
Q Consensus 39 ~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~-~l~s~s~D~~v~iw~~~~~----~~~~~~~-~~~~v~~v~~~~ 112 (268)
....|+..++...+....+. ....+..++|++.+. +..+-...+.|+.+++... .....+. .......+++.+
T Consensus 90 ~~~~I~~i~l~~~~~~~~~~-~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~ 168 (400)
T 3p5b_L 90 NRHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDW 168 (400)
T ss_dssp ETTEEEEECTTSCSCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEET
T ss_pred ccceeEEEccCCcceeEecc-ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEe
Confidence 34667777777665544343 345677899997554 4455556788888888652 1222222 223466788887
Q ss_pred -CCCEEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEeeC-CCeEEEEeCCCCceEEeecC-CCC
Q 024372 113 -DTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTD-SGGVRLWDARSGKIVQTLET-KSP 189 (268)
Q Consensus 113 -~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-d~~i~iwd~~~~~~~~~~~~-~~~ 189 (268)
.+++..+-...+.|.+.+++... ..............++..|.++.++.+-.. .+.|...++........... -..
T Consensus 169 ~~~~lY~~d~~~~~I~~~~~~g~~-~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~ 247 (400)
T 3p5b_L 169 IHSNIYWTDSVLGTVSVADTKGVK-RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQW 247 (400)
T ss_dssp TTTEEEEEETTTTEEEEECTTTCS-EEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSC
T ss_pred cCCceEEEECCCCeEEEEeCCCCc-eEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCc
Confidence 45555555667889888876432 112222222346788888877777766433 36788888864433333332 245
Q ss_pred EEEEEECCCCcEEE-E-eCCCeEEEEeCCCceeeeEEeC---CCCceeeEEcCCCCCEEEeccCCCeEEEEECCCCcEEe
Q 024372 190 VTSAEVSRDGRYIT-T-ADGSSVKFWDANHFGLVKGYNM---PCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIA 264 (268)
Q Consensus 190 v~~~~~s~~g~~l~-~-~~~~~v~~wd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~gs~d~~i~~wd~~~g~~~~ 264 (268)
.+.++++|++..|. + +..+.|..+|+........... -..+..+++. .+.++++-...+.|+.+|..+|+.+.
T Consensus 248 P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~--~~~lywtd~~~~~V~~~~~~~G~~~~ 325 (400)
T 3p5b_L 248 PNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGSDVN 325 (400)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE--TTEEEEEESSSCSEEEEESSSCCCCE
T ss_pred eEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe--CCEEEEecCCCCeEEEEEcCCCCceE
Confidence 78999998765543 3 2457899999864322222222 1233445543 46778887777889999977776654
Q ss_pred e
Q 024372 265 I 265 (268)
Q Consensus 265 ~ 265 (268)
+
T Consensus 326 ~ 326 (400)
T 3p5b_L 326 L 326 (400)
T ss_dssp E
T ss_pred E
Confidence 4
No 274
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.14 E-value=0.0024 Score=53.30 Aligned_cols=223 Identities=7% Similarity=-0.097 Sum_probs=135.1
Q ss_pred CCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCC-cEEEEeeCCCcEEEEeCCCCCeeeeecc-CCeEEEEEECCC-CC
Q 024372 39 KDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANA-LFSASGSADFTAKLWDALTGDEKHSFEH-KHIVRACAFSED-TH 115 (268)
Q Consensus 39 ~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~-~~l~s~s~D~~v~iw~~~~~~~~~~~~~-~~~v~~v~~~~~-~~ 115 (268)
....|+..+....+....+.+. .....++|++.+ .+..+-...+.|+.++.........+.. ......+++.+. ++
T Consensus 51 ~~~~I~~i~~~g~~~~~~~~~~-~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ 129 (349)
T 3v64_C 51 NRIDIRQVLPHRSEYTLLLNNL-ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDK 129 (349)
T ss_dssp CBSCEEEECTTSCCEEEEECSC-SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTE
T ss_pred cccceEEEeCCCCeeEEeecCC-CceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCe
Confidence 3455777777655554444433 346788998655 4445655678899999876654333322 123456788874 44
Q ss_pred EEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEeeCC-CeEEEEeCCCCceEEeec-CCCCEEEE
Q 024372 116 LLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDS-GGVRLWDARSGKIVQTLE-TKSPVTSA 193 (268)
Q Consensus 116 ~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d-~~i~iwd~~~~~~~~~~~-~~~~v~~~ 193 (268)
+..+-...+.|.+.++.... ..............+++.|.++.++.+-... +.|...++.......... .-...+.+
T Consensus 130 ly~~d~~~~~I~~~~~dG~~-~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGl 208 (349)
T 3v64_C 130 LYWTDSGTSRIEVANLDGAH-RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGL 208 (349)
T ss_dssp EEEEETTTTEEEEEETTSCS-CEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEE
T ss_pred EEEEcCCCCeEEEEcCCCCc-eEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceE
Confidence 55555567889999976432 2222222223457888888788887776655 788888876433322222 22457899
Q ss_pred EECCCCcEE-EEe-CCCeEEEEeCCCceeeeEEeC-CCCceeeEEcCCCCCEEEeccCCCeEEEEECCCCcEEee
Q 024372 194 EVSRDGRYI-TTA-DGSSVKFWDANHFGLVKGYNM-PCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIAI 265 (268)
Q Consensus 194 ~~s~~g~~l-~~~-~~~~v~~wd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~gs~d~~i~~wd~~~g~~~~~ 265 (268)
+++|++..| .+. ..+.|..+|+........... ...+..+++. .+.++++-...+.|..+|-.+|+.+.+
T Consensus 209 a~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~--~~~ly~td~~~~~V~~~~~~~G~~~~~ 281 (349)
T 3v64_C 209 TIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF--EDSLYWTDWHTKSINSANKFTGKNQEI 281 (349)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCCSCEE
T ss_pred EEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEEE--CCEEEEecCCCCeEEEEEccCCCccEE
Confidence 999866544 343 457899999864322222221 1234455552 477777877788899998656665443
No 275
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.13 E-value=0.00077 Score=58.10 Aligned_cols=151 Identities=9% Similarity=0.033 Sum_probs=92.9
Q ss_pred EEEEEecC-CCcEEEEeeCCCcEEEEeCCCCCeeeeeccCCeEEEEEECCCCCEEEEeeCC-C----eEEEEECCCCCCC
Q 024372 64 VWSCCLDA-NALFSASGSADFTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFE-K----ILRIFDLNRPDAP 137 (268)
Q Consensus 64 V~~~~~~~-~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~s~~~d-~----~i~~~d~~~~~~~ 137 (268)
...++++| ++..|..+...+.|+.+|...+..............++++++++.|+.+... + .+.+++.. +...
T Consensus 139 P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~-g~~~ 217 (430)
T 3tc9_A 139 AVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE-SGFK 217 (430)
T ss_dssp CCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG-GTSC
T ss_pred CCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC-Ccee
Confidence 35678887 3444444433378888998776655554445567889999999966655542 1 34444432 2221
Q ss_pred C-eEecCCcccEEEEEEeCCCCcEEEEeeCCCeEEEEeCCCCceEEe--ecCCCCEEEEEECCCCcEE-EEe-CCCeEEE
Q 024372 138 P-REVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQT--LETKSPVTSAEVSRDGRYI-TTA-DGSSVKF 212 (268)
Q Consensus 138 ~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~--~~~~~~v~~~~~s~~g~~l-~~~-~~~~v~~ 212 (268)
. ..... ......+++.|.++.++++-...+.|..+|...+..... .........++++|+|++| ++. ..+.|..
T Consensus 218 ~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~ 296 (430)
T 3tc9_A 218 VITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILR 296 (430)
T ss_dssp SEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEE
T ss_pred eeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEE
Confidence 1 12111 122345677785667777766678999999987664232 2222347799999999844 443 4678888
Q ss_pred EeCC
Q 024372 213 WDAN 216 (268)
Q Consensus 213 wd~~ 216 (268)
++..
T Consensus 297 ~~~d 300 (430)
T 3tc9_A 297 SDYD 300 (430)
T ss_dssp EEEE
T ss_pred EeCC
Confidence 7754
No 276
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.12 E-value=0.0024 Score=52.50 Aligned_cols=205 Identities=12% Similarity=-0.080 Sum_probs=119.7
Q ss_pred CCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCC----CCeEEEeeCccCcEEEEEecCC-CcEEEEeeCCCcEEEEeC
Q 024372 16 SRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGET----GDWIGTFEGHKGAVWSCCLDAN-ALFSASGSADFTAKLWDA 90 (268)
Q Consensus 16 ~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~----~~~~~~~~~h~~~V~~~~~~~~-~~~l~s~s~D~~v~iw~~ 90 (268)
.....+++|++ .++....+-...+.|..++... ......+...-.....+++.+. +.+.++-...+.|.+.+.
T Consensus 29 ~~~p~g~~~d~--~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~ 106 (316)
T 1ijq_A 29 LRNVVALDTEV--ASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADT 106 (316)
T ss_dssp CSSEEEEEEET--TTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CCceEEEEEEe--CCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeC
Confidence 34456888885 2455555666667888887765 2222223222234567888764 445566667889999998
Q ss_pred CCCCeeeeec-cCCeEEEEEECCCCCEEEEeeCC--CeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEeeCC
Q 024372 91 LTGDEKHSFE-HKHIVRACAFSEDTHLLLTGGFE--KILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDS 167 (268)
Q Consensus 91 ~~~~~~~~~~-~~~~v~~v~~~~~~~~l~s~~~d--~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d 167 (268)
........+. .....+.++++|.+..++.+... +.|..+++.. ..........-.....+++.++++.++.+-...
T Consensus 107 ~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG-~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~ 185 (316)
T 1ijq_A 107 KGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKL 185 (316)
T ss_dssp TSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-CCEEEEECSSCSCEEEEEEETTTTEEEEEETTT
T ss_pred CCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCC-CCeEEEEECCCCCceEEEEeccCCEEEEEECCC
Confidence 6544433332 22456788999865555544433 6788888753 211111112233567889998888888777777
Q ss_pred CeEEEEeCCCCceEEeec---CCCCEEEEEECCCCcEEEE-eCCCeEEEEeCCCceeeeEE
Q 024372 168 GGVRLWDARSGKIVQTLE---TKSPVTSAEVSRDGRYITT-ADGSSVKFWDANHFGLVKGY 224 (268)
Q Consensus 168 ~~i~iwd~~~~~~~~~~~---~~~~v~~~~~s~~g~~l~~-~~~~~v~~wd~~~~~~~~~~ 224 (268)
+.|..+|+.......... .-.....+++.. +.++.+ ...+.|..+|..+++.+..+
T Consensus 186 ~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~-~~ly~~d~~~~~V~~~~~~~g~~~~~i 245 (316)
T 1ijq_A 186 HSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFSANRLTGSDVNLL 245 (316)
T ss_dssp TEEEEEETTSCSCEEEEECTTTTSSEEEEEEET-TEEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred CeEEEEecCCCceEEEeecCCccCCcEEEEEEC-CEEEEEECCCCeEEEEeCCCCcceEEE
Confidence 899999997432221112 123366788864 444444 35678888887555443333
No 277
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.12 E-value=0.0013 Score=54.78 Aligned_cols=190 Identities=8% Similarity=0.124 Sum_probs=109.1
Q ss_pred EEEEeeCCCcEEEEeCCCCCeeeeeccCCeEEEEEECC----CCC---EEEEee-C--CCeEEEEECCCCCCCCeEecC-
Q 024372 75 FSASGSADFTAKLWDALTGDEKHSFEHKHIVRACAFSE----DTH---LLLTGG-F--EKILRIFDLNRPDAPPREVGN- 143 (268)
Q Consensus 75 ~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~v~~v~~~~----~~~---~l~s~~-~--d~~i~~~d~~~~~~~~~~~~~- 143 (268)
+++.....+-+.++|+ +++.+..+.. ..++.|..-| .++ ++++.. . ++.+.+|++............
T Consensus 42 ~ii~t~k~~gL~Vydl-~G~~l~~~~~-g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~~~ 119 (355)
T 3amr_A 42 KLITTNKKSGLVVYSL-DGKMLHSYNT-GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMTDP 119 (355)
T ss_dssp EEEEEETTTEEEEEET-TSCEEEEECC-SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECSCT
T ss_pred EEEEEcCCCCEEEEcC-CCcEEEEccC-CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeecccc
Confidence 3444445678999999 7887777754 3344443333 232 223333 3 588999976321212222211
Q ss_pred -----Cc-ccEEEEEE--eCCCC-cEEEEeeCCCeEEEEeCC-------CCceEEeecCCCCEEEEEECCCCcE-EEEeC
Q 024372 144 -----SS-GSIRTVAW--LHSDQ-TILSSCTDSGGVRLWDAR-------SGKIVQTLETKSPVTSAEVSRDGRY-ITTAD 206 (268)
Q Consensus 144 -----~~-~~v~~~~~--~~~~~-~~~~~~~~d~~i~iwd~~-------~~~~~~~~~~~~~v~~~~~s~~g~~-l~~~~ 206 (268)
.. .....+++ .+.++ .++.....+|.+..|++. +.+.++++.....+..+...+.... +++-+
T Consensus 120 ~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv~eE 199 (355)
T 3amr_A 120 DHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLYIAEE 199 (355)
T ss_dssp TSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEEEEET
T ss_pred ccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeEEEecc
Confidence 00 23444555 55444 345555667999999882 3356788887778999999986544 45556
Q ss_pred CCeEEEEeCC-----CceeeeEEeCC---CCceeeEEcC-CCCC-EEEe-ccCCCeEEEEECC-CCcEEeec
Q 024372 207 GSSVKFWDAN-----HFGLVKGYNMP---CNTESASLEP-KLGN-IFIA-GGEDMWVHVFDFH-TGEQIAIT 266 (268)
Q Consensus 207 ~~~v~~wd~~-----~~~~~~~~~~~---~~~~~~~~~~-~~~~-~~~~-gs~d~~i~~wd~~-~g~~~~~~ 266 (268)
+..|..+|.+ +...+..+... ....-+.+.+ .+++ ++++ +-.+....+||.. +.+.+..+
T Consensus 200 d~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f 271 (355)
T 3amr_A 200 DEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADF 271 (355)
T ss_dssp TTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEE
T ss_pred cceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEE
Confidence 6666666754 23445444322 2334444431 1333 4554 4467789999986 67776654
No 278
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.06 E-value=0.0034 Score=54.15 Aligned_cols=197 Identities=11% Similarity=0.050 Sum_probs=113.3
Q ss_pred EEEEEecCC---CcEEEEeeCCCcEEEEeCCCCCeeeeeccCCeEEEEEECCCCCEEEEeeCC---C-eEEEEECCCCCC
Q 024372 64 VWSCCLDAN---ALFSASGSADFTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFE---K-ILRIFDLNRPDA 136 (268)
Q Consensus 64 V~~~~~~~~---~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~s~~~d---~-~i~~~d~~~~~~ 136 (268)
-..++++++ +.+.++-.. +.|+.++..++..............++++++++++++-... . .+..++......
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~-~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~ 219 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQR-DAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFT 219 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBT-SCEEEEETTTTEEEEECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTC
T ss_pred CceEEEccccCCCEEEEEeCC-CCEEEEECCCCEEEEeecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCee
Confidence 457888884 554444333 88999998777766555544567889999999955443311 1 233333221111
Q ss_pred CCeEecCCcccEEEEEEeCCCCcEEEEeeCCCeEEEEeCCCCceEEee-c--CCCCEEEEEECCCCcEE-EEe-CCCeEE
Q 024372 137 PPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTL-E--TKSPVTSAEVSRDGRYI-TTA-DGSSVK 211 (268)
Q Consensus 137 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~-~--~~~~v~~~~~s~~g~~l-~~~-~~~~v~ 211 (268)
....... ......+++.+.++.++++...++.|+.+|..+++....+ . .......++++|+|++| ++. ..+.|+
T Consensus 220 ~~~~~~~-~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~ 298 (433)
T 4hw6_A 220 ERLSLCN-ARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIY 298 (433)
T ss_dssp CEEEEEE-CSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEE
T ss_pred ccccccc-cCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEE
Confidence 0011111 1123446667756677766666689999999877763322 2 22224579999999844 443 457898
Q ss_pred EEeCCC--cee--eeEEeCC----------------CCceeeEEc--------CCCCCEEEeccCCCeEEEEECCCCcEE
Q 024372 212 FWDANH--FGL--VKGYNMP----------------CNTESASLE--------PKLGNIFIAGGEDMWVHVFDFHTGEQI 263 (268)
Q Consensus 212 ~wd~~~--~~~--~~~~~~~----------------~~~~~~~~~--------~~~~~~~~~gs~d~~i~~wd~~~g~~~ 263 (268)
.+|... ... ...+... ..+..+++. ...|.++++=..+..|+.++. +|+..
T Consensus 299 ~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~v~ 377 (433)
T 4hw6_A 299 RVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGRVT 377 (433)
T ss_dssp EEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSEEE
T ss_pred EEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCCEE
Confidence 877542 211 1122111 112335551 335777777777888999984 56544
No 279
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.06 E-value=0.0033 Score=51.82 Aligned_cols=204 Identities=7% Similarity=-0.082 Sum_probs=120.4
Q ss_pred CeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeE-EEeeCccCcEEEEEecCC-CcEEEEeeCCCcEEEEeCCCCCe
Q 024372 18 PVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWI-GTFEGHKGAVWSCCLDAN-ALFSASGSADFTAKLWDALTGDE 95 (268)
Q Consensus 18 ~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~-~~~~~h~~~V~~~~~~~~-~~~l~s~s~D~~v~iw~~~~~~~ 95 (268)
...+++|++ .++.+..+-...+.|..++...+... ..+...-.....+++.+. +.+..+-...+.|.+.++.....
T Consensus 36 ~~~~ld~d~--~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~ 113 (318)
T 3sov_A 36 DAAAVDFVF--SHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR 113 (318)
T ss_dssp EEEEEEEEG--GGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred ccEEEEEEe--CCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcE
Confidence 345788876 24555555566667777776654211 112212234456778764 45556666678899999865443
Q ss_pred eeee-ccCCeEEEEEECCCCCEEEEeeC--CCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEeeCCCeEEE
Q 024372 96 KHSF-EHKHIVRACAFSEDTHLLLTGGF--EKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRL 172 (268)
Q Consensus 96 ~~~~-~~~~~v~~v~~~~~~~~l~s~~~--d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~i 172 (268)
.... ......+.+++.|.+..++.+.. .+.|...++... .........-..-+.+++.++++.++.+-+..+.|..
T Consensus 114 ~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~-~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~ 192 (318)
T 3sov_A 114 KVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGS-SRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHK 192 (318)
T ss_dssp EEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSC-SCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCC-CeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEE
Confidence 3332 22234678889986555555442 577888887532 2212222222345789999888888877777789999
Q ss_pred EeCCCCceEEeec-CCCCEEEEEECCCCcEEEEeCCCeEEEEeCCCceeeeEE
Q 024372 173 WDARSGKIVQTLE-TKSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGY 224 (268)
Q Consensus 173 wd~~~~~~~~~~~-~~~~v~~~~~s~~g~~l~~~~~~~v~~wd~~~~~~~~~~ 224 (268)
+|+.......... .......+++..++-|++-...+.|..+|..+++.++.+
T Consensus 193 ~d~dG~~~~~~~~~~~~~P~glav~~~~lywtd~~~~~V~~~~~~~G~~~~~i 245 (318)
T 3sov_A 193 SNLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWSTHSILACNKYTGEGLREI 245 (318)
T ss_dssp EETTSCSCEEEECSCCSCEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred EcCCCCceEEEecCCCCCceEEEEeCCEEEEEecCCCeEEEEECCCCCceEEE
Confidence 9987433222222 223467788876554555445678988898655444333
No 280
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.03 E-value=0.0086 Score=55.57 Aligned_cols=224 Identities=6% Similarity=-0.096 Sum_probs=133.4
Q ss_pred eCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCC-CcEEEEeeCCCcEEEEeCCCC----Ceeeeec-cCCeEEEEEEC
Q 024372 38 SKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDAN-ALFSASGSADFTAKLWDALTG----DEKHSFE-HKHIVRACAFS 111 (268)
Q Consensus 38 s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~-~~~l~s~s~D~~v~iw~~~~~----~~~~~~~-~~~~v~~v~~~ 111 (268)
+....|+..++...+....+.+ ...+..++|.+. +.++.+-...+.|+.+++... .....+. .......+++.
T Consensus 401 an~~~Ir~i~l~~~~~~~l~~~-~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD 479 (791)
T 3m0c_C 401 TNRHEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVD 479 (791)
T ss_dssp ECBSSEEEECTTSCCCEEEECS-CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEE
T ss_pred ccccceeEeeccCCcceeeecC-CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeee
Confidence 3445677777766655443433 445678899875 445556666788888888653 1222222 22345578888
Q ss_pred CCCC-EEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEeeCC-CeEEEEeCCCCceEEeecC-CC
Q 024372 112 EDTH-LLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDS-GGVRLWDARSGKIVQTLET-KS 188 (268)
Q Consensus 112 ~~~~-~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d-~~i~iwd~~~~~~~~~~~~-~~ 188 (268)
+.+. +.++-...+.|.+.++.... ..............|++.|..+.++.+-... +.|...++........+.. -.
T Consensus 480 ~~~~~LY~tD~~~~~I~v~~ldG~~-~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~ 558 (791)
T 3m0c_C 480 WIHSNIYWTDSVLGTVSVADTKGVK-RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQ 558 (791)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSSS-EEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCS
T ss_pred ecCCcEEEEecCCCeEEEEeCCCCe-EEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCC
Confidence 7664 44455567889999986432 2122222233467889888877777775443 6788888864443333332 24
Q ss_pred CEEEEEECCCCcEE-EE-eCCCeEEEEeCCCceeeeEEeCC---CCceeeEEcCCCCCEEEeccCCCeEEEEECCCCcEE
Q 024372 189 PVTSAEVSRDGRYI-TT-ADGSSVKFWDANHFGLVKGYNMP---CNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQI 263 (268)
Q Consensus 189 ~v~~~~~s~~g~~l-~~-~~~~~v~~wd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~gs~d~~i~~wd~~~g~~~ 263 (268)
..+.|++++.+..| .+ .....|...|+............ ..+..+++. .++++++-.....|+..|..+|+.+
T Consensus 559 ~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~--~~~lYwtD~~~~~I~~~dk~tG~~~ 636 (791)
T 3m0c_C 559 WPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGSDV 636 (791)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCCCC
T ss_pred CceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEe--CCEEEEEECCCCEEEEEeCCCCcce
Confidence 58899999765544 34 23568999998654332222221 233455543 3677777777888998887777655
Q ss_pred ee
Q 024372 264 AI 265 (268)
Q Consensus 264 ~~ 265 (268)
.+
T Consensus 637 ~~ 638 (791)
T 3m0c_C 637 NL 638 (791)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 281
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.01 E-value=0.0043 Score=51.27 Aligned_cols=228 Identities=7% Similarity=-0.029 Sum_probs=119.6
Q ss_pred CCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEee---CccCcEEEEEecCCCcEEEEeeCCCcE-EEEeCC
Q 024372 16 SRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFE---GHKGAVWSCCLDANALFSASGSADFTA-KLWDAL 91 (268)
Q Consensus 16 ~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~---~h~~~V~~~~~~~~~~~l~s~s~D~~v-~iw~~~ 91 (268)
...+.++.|.| +...+ ++.++.+.. ....|+.=.... .+.+.+..+.+.+++..++.+. ++.+ +-.|--
T Consensus 79 ~~~~~~i~~~~----~~~~~-~g~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~g~v~~S~DgG 151 (327)
T 2xbg_A 79 DYRFNSVSFQG----NEGWI-VGEPPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITN-VGAIYRTKDSG 151 (327)
T ss_dssp CCEEEEEEEET----TEEEE-EEETTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEET-TCCEEEESSTT
T ss_pred CccEEEEEecC----CeEEE-EECCCeEEE-ECCCCCCceECccccCCCCCeEEEEEECCCCEEEEeC-CccEEEEcCCC
Confidence 34678888873 33444 445553322 222243211121 2334577777766676666554 4443 333321
Q ss_pred CCCeeeeeccCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEeeCCCeEE
Q 024372 92 TGDEKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVR 171 (268)
Q Consensus 92 ~~~~~~~~~~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~ 171 (268)
..-..........+..+.+.+++.+++.+...+..+..|-. +..-..........+..+.+.+++. +++.+ .+|.++
T Consensus 152 ~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~g-G~tW~~~~~~~~~~~~~~~~~~~g~-~~~~~-~~G~~~ 228 (327)
T 2xbg_A 152 KNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPG-QTAWEPHNRTTSRRLHNMGFTPDGR-LWMIV-NGGKIA 228 (327)
T ss_dssp SSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTT-CSSCEEEECCSSSCEEEEEECTTSC-EEEEE-TTTEEE
T ss_pred CCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCC-CCceeECCCCCCCccceeEECCCCC-EEEEe-CCceEE
Confidence 11112222234467889999998888776555544444431 1111111122334677788777664 44443 458887
Q ss_pred EEeCCCCceEEeec-----CCCCEEEEEECCCCcEEEEeCCCeEEEEeCC---CceeeeEE-eCCCCceeeEEcCCCCCE
Q 024372 172 LWDARSGKIVQTLE-----TKSPVTSAEVSRDGRYITTADGSSVKFWDAN---HFGLVKGY-NMPCNTESASLEPKLGNI 242 (268)
Q Consensus 172 iwd~~~~~~~~~~~-----~~~~v~~~~~s~~g~~l~~~~~~~v~~wd~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~ 242 (268)
+.+...++....+. ....+..+.+.|++.+++++.++.| ++... ++..+... ..+.....+.+.+ +..
T Consensus 229 ~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~--~~~ 305 (327)
T 2xbg_A 229 FSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFS--PDQ 305 (327)
T ss_dssp EEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEESTTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEE--TTE
T ss_pred EecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeCCCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEEC--CCc
Confidence 77533344333332 1234788999999888888777766 33333 23222211 1123444555543 445
Q ss_pred EEeccCCCeEEEEE
Q 024372 243 FIAGGEDMWVHVFD 256 (268)
Q Consensus 243 ~~~gs~d~~i~~wd 256 (268)
+++++.++.|+-++
T Consensus 306 ~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 306 GFILGQKGILLRYV 319 (327)
T ss_dssp EEEECSTTEEEEEC
T ss_pred eEEEcCCceEEEEc
Confidence 66777888887775
No 282
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.95 E-value=0.00071 Score=60.82 Aligned_cols=190 Identities=11% Similarity=0.034 Sum_probs=114.4
Q ss_pred cEEEEeeC-CCcEEEEeC-CCCCeeeeeccCCe------------EEEEEECCCCCE----EEEeeCCCeEEEEECCCCC
Q 024372 74 LFSASGSA-DFTAKLWDA-LTGDEKHSFEHKHI------------VRACAFSEDTHL----LLTGGFEKILRIFDLNRPD 135 (268)
Q Consensus 74 ~~l~s~s~-D~~v~iw~~-~~~~~~~~~~~~~~------------v~~v~~~~~~~~----l~s~~~d~~i~~~d~~~~~ 135 (268)
..+..++. ++.|.-+|. .+++.+-.+..... .+.+.+.|.+.. ++.++.|+.+.-+|..+++
T Consensus 63 g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~ 142 (599)
T 1w6s_A 63 GKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETGE 142 (599)
T ss_dssp TEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTCC
T ss_pred CEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCCC
Confidence 34445555 788999999 89998776653321 123444333333 7778889999999988776
Q ss_pred CCCeEecCC-c--ccEEE-EEEeCCCCcEEEEee-----CCCeEEEEeCCCCceEEeecCCCCE----------------
Q 024372 136 APPREVGNS-S--GSIRT-VAWLHSDQTILSSCT-----DSGGVRLWDARSGKIVQTLETKSPV---------------- 190 (268)
Q Consensus 136 ~~~~~~~~~-~--~~v~~-~~~~~~~~~~~~~~~-----~d~~i~iwd~~~~~~~~~~~~~~~v---------------- 190 (268)
...+..... . ..+.+ -... ++.++++++ .++.|+-+|.++|+.+..+....+.
T Consensus 143 ~~W~~~~~~~~~~~~~~ssP~v~--~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~ 220 (599)
T 1w6s_A 143 TVWKVENSDIKVGSTLTIAPYVV--KDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHY 220 (599)
T ss_dssp EEEEEECCCGGGTCBCCSCCEEE--TTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGG
T ss_pred EEEeecCCCCCccceeecCCEEE--CCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCccccccccccccccccc
Confidence 543322111 0 01111 0111 234444432 2689999999999998766532211
Q ss_pred -----------------------EEEEECCCCcEEE-EeCC----------------CeEEEEeCCCceeeeEEeCCCC-
Q 024372 191 -----------------------TSAEVSRDGRYIT-TADG----------------SSVKFWDANHFGLVKGYNMPCN- 229 (268)
Q Consensus 191 -----------------------~~~~~s~~g~~l~-~~~~----------------~~v~~wd~~~~~~~~~~~~~~~- 229 (268)
...++.+...++. ...+ ..|..+|.++++.+-.++....
T Consensus 221 g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d 300 (599)
T 1w6s_A 221 GQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHD 300 (599)
T ss_dssp CCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTC
T ss_pred cccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCc
Confidence 1345555554443 3222 3789999999988877765321
Q ss_pred ---------ceeeEEcCCCC---CEEEeccCCCeEEEEECCCCcEEee
Q 024372 230 ---------TESASLEPKLG---NIFIAGGEDMWVHVFDFHTGEQIAI 265 (268)
Q Consensus 230 ---------~~~~~~~~~~~---~~~~~gs~d~~i~~wd~~~g~~~~~ 265 (268)
+........+| ..++.++.++.+++.|.++|+++-.
T Consensus 301 ~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~ 348 (599)
T 1w6s_A 301 EWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSA 348 (599)
T ss_dssp SSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEE
T ss_pred cccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeec
Confidence 11222211246 5677789999999999999998753
No 283
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.93 E-value=0.013 Score=54.24 Aligned_cols=234 Identities=11% Similarity=-0.002 Sum_probs=136.3
Q ss_pred CCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEee--------------CccCcEEEEEecCCCcEEEEeeCC
Q 024372 17 RPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFE--------------GHKGAVWSCCLDANALFSASGSAD 82 (268)
Q Consensus 17 ~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~--------------~h~~~V~~~~~~~~~~~l~s~s~D 82 (268)
..|.++... ++|. |-.|+..+-+.+++..+++...... -....|.++...+++.+. .|..+
T Consensus 258 ~~i~~i~~d---~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~lW-igt~~ 332 (781)
T 3v9f_A 258 SYIFSIKQL---KDNK-LWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNNIW-IGTWG 332 (781)
T ss_dssp CCEEEEEEC---TTSE-EEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCCEE-EEEBS
T ss_pred ceEEEEEEC---CCCC-EEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCCEE-EEecC
Confidence 457777765 3665 4557775677888887765432111 134578999888888654 45566
Q ss_pred CcEEEEeCCCCCeeeeec----------cCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCC--eEecCCcccEEE
Q 024372 83 FTAKLWDALTGDEKHSFE----------HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPP--REVGNSSGSIRT 150 (268)
Q Consensus 83 ~~v~iw~~~~~~~~~~~~----------~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~--~~~~~~~~~v~~ 150 (268)
+-|..++..+........ ....|.++...+++.+. .|+.++-+..||..+..... .........|.+
T Consensus 333 ~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lW-igt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~ 411 (781)
T 3v9f_A 333 GGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLW-IGTDGGGINVFENGKRVAIYNKENRELLSNSVLC 411 (781)
T ss_dssp SCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEE-EEEBSSCEEEEETTEEEEECC-----CCCSBEEE
T ss_pred CeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEE-EEeCCCcEEEEECCCCeEEEccCCCCCCCcceEE
Confidence 778888876554322210 22458888888888754 45555567888865321100 000122356788
Q ss_pred EEEeCCCCcEEEEeeCCCeEEEEeCCCCceEEeec---CCCCEEEEEECCCCcEEEEeCCCeEEEEeCCCceeeeEEeCC
Q 024372 151 VAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLE---TKSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGYNMP 227 (268)
Q Consensus 151 ~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~---~~~~v~~~~~s~~g~~l~~~~~~~v~~wd~~~~~~~~~~~~~ 227 (268)
+...+++ .+.+ |+.++.|..+|.++++...... ....+.++...++|++.++.. +.|..+|..+.+........
T Consensus 412 i~~d~~g-~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~~~~~ 488 (781)
T 3v9f_A 412 SLKDSEG-NLWF-GTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTH-AGVFVIDLASKKVIHHYDTS 488 (781)
T ss_dssp EEECTTS-CEEE-EETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEET-TEEEEEESSSSSCCEEECTT
T ss_pred EEECCCC-CEEE-EeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEEC-CceEEEeCCCCeEEecccCc
Confidence 7765544 4444 4455789999998776543321 235689999999999887776 67888998764332211111
Q ss_pred -----CC-ceeeEEcCCCCCEEEeccCCCeEEEEECCCCc
Q 024372 228 -----CN-TESASLEPKLGNIFIAGGEDMWVHVFDFHTGE 261 (268)
Q Consensus 228 -----~~-~~~~~~~~~~~~~~~~gs~d~~i~~wd~~~g~ 261 (268)
.. +..+...+ .|.+. .|+.++-++.||.++++
T Consensus 489 ~~~~~~~~i~~i~~d~-~g~lW-igt~~~Gl~~~~~~~~~ 526 (781)
T 3v9f_A 489 NSQLLENFVRSIAQDS-EGRFW-IGTFGGGVGIYTPDMQL 526 (781)
T ss_dssp TSSCSCSCEEEEEECT-TCCEE-EEESSSCEEEECTTCCE
T ss_pred ccccccceeEEEEEcC-CCCEE-EEEcCCCEEEEeCCCCe
Confidence 12 23333333 46644 44443337778876554
No 284
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.93 E-value=0.0076 Score=51.33 Aligned_cols=206 Identities=13% Similarity=-0.061 Sum_probs=121.5
Q ss_pred CCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCC----CeEEEeeCccCcEEEEEecC-CCcEEEEeeCCCcEEEEeC
Q 024372 16 SRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETG----DWIGTFEGHKGAVWSCCLDA-NALFSASGSADFTAKLWDA 90 (268)
Q Consensus 16 ~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~----~~~~~~~~h~~~V~~~~~~~-~~~~l~s~s~D~~v~iw~~ 90 (268)
...+.+++|++ .++.+..+-...+.|..++.... .....+.........+++.+ .+.+.++-...+.|.+.++
T Consensus 111 ~~~~~~l~~d~--~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~ 188 (400)
T 3p5b_L 111 LRNVVALDTEV--ASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADT 188 (400)
T ss_dssp CSCEEEEEEET--TTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECT
T ss_pred cCcceEEeeee--ccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeC
Confidence 34566888875 24445555555666766766542 22222332334567788887 4455566667788999988
Q ss_pred CCCCeeeeec-cCCeEEEEEECCCCCEEEEeeC--CCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEeeCC
Q 024372 91 LTGDEKHSFE-HKHIVRACAFSEDTHLLLTGGF--EKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDS 167 (268)
Q Consensus 91 ~~~~~~~~~~-~~~~v~~v~~~~~~~~l~s~~~--d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d 167 (268)
........+. .....+.+++.|.+..|+...+ .+.|...++... .........-.....+++.+.++.++.+-...
T Consensus 189 ~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~-~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~ 267 (400)
T 3p5b_L 189 KGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSLVTENIQWPNGITLDLLSGRLYWVDSKL 267 (400)
T ss_dssp TTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSC-SCEEEECSSCSCEEEEEEETTTTEEEEEETTT
T ss_pred CCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCC-ccEEEEECCCCceEEEEEEeCCCEEEEEECCC
Confidence 7655444433 2234678999986555554442 367888887532 22222222224567899998888888776667
Q ss_pred CeEEEEeCCCCceEEeecC---CCCEEEEEECCCCcEEEEeCCCeEEEEeCCCceeeeEE
Q 024372 168 GGVRLWDARSGKIVQTLET---KSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGY 224 (268)
Q Consensus 168 ~~i~iwd~~~~~~~~~~~~---~~~v~~~~~s~~g~~l~~~~~~~v~~wd~~~~~~~~~~ 224 (268)
+.|...|+........... -.....+++..+.-|++-...+.|..+|..+++.+..+
T Consensus 268 ~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~~~lywtd~~~~~V~~~~~~~G~~~~~i 327 (400)
T 3p5b_L 268 HSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLL 327 (400)
T ss_dssp TEEEEEETTSCCCEEEEECSSTTSSEEEEEEETTEEEEEESSSCSEEEEESSSCCCCEEE
T ss_pred CEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeCCEEEEecCCCCeEEEEEcCCCCceEEE
Confidence 8999999875433222221 23356778755444444445678888886555444333
No 285
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.89 E-value=0.00071 Score=61.53 Aligned_cols=196 Identities=13% Similarity=0.131 Sum_probs=102.6
Q ss_pred EEEecC-CCcEEEEeeCCC-----------cEEEEeCCCCCeee--eec--cCCeEEEEEECCCCCEEEEee-CCCeEEE
Q 024372 66 SCCLDA-NALFSASGSADF-----------TAKLWDALTGDEKH--SFE--HKHIVRACAFSEDTHLLLTGG-FEKILRI 128 (268)
Q Consensus 66 ~~~~~~-~~~~l~s~s~D~-----------~v~iw~~~~~~~~~--~~~--~~~~v~~v~~~~~~~~l~s~~-~d~~i~~ 128 (268)
.+++.+ ++++++.|+.+. .+.+||..++.-.. ... +......+++..++++++.|+ .+..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 445666 788888887543 57889988776322 121 222333467788999999988 4467999
Q ss_pred EECCCCCCCC-eEecCCcccEEEEEEeCCCCcEEEEeeCC-----CeEEEEeCCCCceEEe-----ecCCCCEEEEEECC
Q 024372 129 FDLNRPDAPP-REVGNSSGSIRTVAWLHSDQTILSSCTDS-----GGVRLWDARSGKIVQT-----LETKSPVTSAEVSR 197 (268)
Q Consensus 129 ~d~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~d-----~~i~iwd~~~~~~~~~-----~~~~~~v~~~~~s~ 197 (268)
||..+.+... ........ -.+++..+++..++++|..+ +.+.+||+.+.+-... ......-....+..
T Consensus 270 yd~~t~~W~~~~~~~~~R~-~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~ 348 (656)
T 1k3i_A 270 YDSSSDSWIPGPDMQVARG-YQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRS 348 (656)
T ss_dssp EEGGGTEEEECCCCSSCCS-SCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTT
T ss_pred ecCcCCceeECCCCCcccc-ccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeec
Confidence 9976432110 00111111 12334445665555544233 4699999988753332 00000000011223
Q ss_pred CCcE-EEEe---------CCCeEEEEeCCCceeeeEEeCC---------C-CceeeEEcCCCCCEEEeccCCC-------
Q 024372 198 DGRY-ITTA---------DGSSVKFWDANHFGLVKGYNMP---------C-NTESASLEPKLGNIFIAGGEDM------- 250 (268)
Q Consensus 198 ~g~~-l~~~---------~~~~v~~wd~~~~~~~~~~~~~---------~-~~~~~~~~~~~~~~~~~gs~d~------- 250 (268)
+++. ++.+ ....+..||............. . ...+..+....+++++.||.+.
T Consensus 349 ~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~ 428 (656)
T 1k3i_A 349 DNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDAT 428 (656)
T ss_dssp TCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCC
T ss_pred CCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcC
Confidence 3332 3332 2346788898765433222111 0 1112222233688899988543
Q ss_pred ----eEEEEECCCCcE
Q 024372 251 ----WVHVFDFHTGEQ 262 (268)
Q Consensus 251 ----~i~~wd~~~g~~ 262 (268)
.|.+||..+++-
T Consensus 429 ~~~~~v~~yd~~~~~W 444 (656)
T 1k3i_A 429 TNAHIITLGEPGTSPN 444 (656)
T ss_dssp CCEEEEECCSTTSCCE
T ss_pred CcceEEEcCCCCCCCe
Confidence 688888776543
No 286
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.89 E-value=0.00026 Score=64.98 Aligned_cols=205 Identities=13% Similarity=-0.066 Sum_probs=113.9
Q ss_pred CeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCC----CCeEEEeeCccCcEEEEEecCC-CcEEEEeeCCCcEEEEeCCC
Q 024372 18 PVVDLFYSPITPDGFFLVSASKDSSPMLRNGET----GDWIGTFEGHKGAVWSCCLDAN-ALFSASGSADFTAKLWDALT 92 (268)
Q Consensus 18 ~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~----~~~~~~~~~h~~~V~~~~~~~~-~~~l~s~s~D~~v~iw~~~~ 92 (268)
.+.+++|.+ .++.+..+-...+.|+.++... ......+.........+++.+. +.++++-...+.|.+.++..
T Consensus 407 ~p~gla~d~--~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg 484 (699)
T 1n7d_A 407 NVVALDTEV--ASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 484 (699)
T ss_dssp TCCCCEEET--TTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSS
T ss_pred ceEEEcccc--ccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCC
Confidence 345778875 2344444445567787777654 1211112111122345677743 44455555678899999865
Q ss_pred CCeeeeecc-CCeEEEEEECCCCCEEEEeeC-C-CeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEeeCCCe
Q 024372 93 GDEKHSFEH-KHIVRACAFSEDTHLLLTGGF-E-KILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGG 169 (268)
Q Consensus 93 ~~~~~~~~~-~~~v~~v~~~~~~~~l~s~~~-d-~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~ 169 (268)
......+.. ....+.++++|.+..|+.+.. . +.|..+++.... ..............|++.+.++.++.+-...+.
T Consensus 485 ~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~-~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~ 563 (699)
T 1n7d_A 485 VKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS 563 (699)
T ss_dssp CCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCC-CCEESCSSCSSCCCEEECTTTCCEEEEETTTTE
T ss_pred CceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCC-eeEEEeCCCCCccEEEEeccCCEEEEEecCCCe
Confidence 544333322 233567788886554444432 2 677777764322 111111112234568888888888777777789
Q ss_pred EEEEeCCCCceEEeecC---CCCEEEEEECCCCcEEEEeCCCeEEEEeCCCceeeeEEe
Q 024372 170 VRLWDARSGKIVQTLET---KSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGYN 225 (268)
Q Consensus 170 i~iwd~~~~~~~~~~~~---~~~v~~~~~s~~g~~l~~~~~~~v~~wd~~~~~~~~~~~ 225 (268)
|..+|+........+.. ......+++..+..|++....+.|..+|..+++.++.+.
T Consensus 564 I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~~lywtd~~~~~V~~~d~~~G~~~~~i~ 622 (699)
T 1n7d_A 564 ISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLA 622 (699)
T ss_dssp EEEECSSSSCCEEECCCSSSCSSCCCCEEETTEEEEECSTTTCEEEEETTTEEEEECCC
T ss_pred EEEEccCCCceEEEEecCCcCCCceEeEEECCEEEEEeCCCCeEEEEEccCCCceEEee
Confidence 99999864332222221 122345666666444444456789999987666555543
No 287
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.87 E-value=0.0077 Score=49.60 Aligned_cols=222 Identities=8% Similarity=-0.099 Sum_probs=128.3
Q ss_pred CCCeEEeeCCCCC--eEEEeeCccCcEEEEEecCC-CcEEEEeeCCCcEEEEeCCCCCeee-eec-cCCeEEEEEECC-C
Q 024372 40 DSSPMLRNGETGD--WIGTFEGHKGAVWSCCLDAN-ALFSASGSADFTAKLWDALTGDEKH-SFE-HKHIVRACAFSE-D 113 (268)
Q Consensus 40 d~~i~iw~~~~~~--~~~~~~~h~~~V~~~~~~~~-~~~l~s~s~D~~v~iw~~~~~~~~~-~~~-~~~~v~~v~~~~-~ 113 (268)
...|+..++.... ....+.+ ......+.|.+. +.+..+-...+.|+.++........ .+. .-.....+++.+ .
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~~-~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~ 90 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVGG-LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLG 90 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEEE-EEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTT
T ss_pred cCeEEEEECCCCceEEEEEecC-CCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCC
Confidence 3456666665542 2212222 234557888875 4455566667889889887653211 111 112345677886 4
Q ss_pred CCEEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEee-CCCeEEEEeCCCCceEEeec-CCCCEE
Q 024372 114 THLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCT-DSGGVRLWDARSGKIVQTLE-TKSPVT 191 (268)
Q Consensus 114 ~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~d~~i~iwd~~~~~~~~~~~-~~~~v~ 191 (268)
+++..+-...+.|.+++++... ..............++..|.++.++.+-. ..+.|...++.......... .-...+
T Consensus 91 g~ly~~d~~~~~I~~~~~dG~~-~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pn 169 (318)
T 3sov_A 91 EKLYWTDSETNRIEVSNLDGSL-RKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPN 169 (318)
T ss_dssp TEEEEEETTTTEEEEEETTSCS-CEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEE
T ss_pred CeEEEEECCCCEEEEEECCCCc-EEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCcc
Confidence 4555555567889999976422 21222222334577888887777776643 24678888876332222222 224578
Q ss_pred EEEECCCCcEE-EEe-CCCeEEEEeCCCceeeeEEe-CCCCceeeEEcCCCCCEEEeccCCCeEEEEECCCCcEEee
Q 024372 192 SAEVSRDGRYI-TTA-DGSSVKFWDANHFGLVKGYN-MPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIAI 265 (268)
Q Consensus 192 ~~~~s~~g~~l-~~~-~~~~v~~wd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~gs~d~~i~~wd~~~g~~~~~ 265 (268)
.++++|++..| .+- ..+.|..+|+.......... ....+..+++. .+.++++-...+.|..+|..+|+.+.+
T Consensus 170 glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~--~~~lywtd~~~~~V~~~~~~~G~~~~~ 244 (318)
T 3sov_A 170 GLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLF--EDILYWTDWSTHSILACNKYTGEGLRE 244 (318)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEE--TTEEEEEETTTTEEEEEETTTCCSCEE
T ss_pred EEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEe--CCEEEEEecCCCeEEEEECCCCCceEE
Confidence 99999965544 443 45789999986422211112 11233445554 367777877788999999877775443
No 288
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.86 E-value=0.0077 Score=52.63 Aligned_cols=198 Identities=10% Similarity=0.008 Sum_probs=115.2
Q ss_pred EEEEEecCC-Cc-EEEEeeCCCcEEEEeCCCCCeeeeeccC----CeEEEEEE-------CCCCCEEEEeeCCC------
Q 024372 64 VWSCCLDAN-AL-FSASGSADFTAKLWDALTGDEKHSFEHK----HIVRACAF-------SEDTHLLLTGGFEK------ 124 (268)
Q Consensus 64 V~~~~~~~~-~~-~l~s~s~D~~v~iw~~~~~~~~~~~~~~----~~v~~v~~-------~~~~~~l~s~~~d~------ 124 (268)
-..++|+|. .. ++++-...+.|++.|..++......... .....++| +++++.|+.+...+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~ 220 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDES 220 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGE
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccC
Confidence 457888883 43 4444444467888898877665544322 24788999 99999666665543
Q ss_pred -eEEEEECCC-CCCCC----eEecCCcccEEEEEEeCCCCcEEEEeeCCCeEEEEeCC-------CCce-----------
Q 024372 125 -ILRIFDLNR-PDAPP----REVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDAR-------SGKI----------- 180 (268)
Q Consensus 125 -~i~~~d~~~-~~~~~----~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~iwd~~-------~~~~----------- 180 (268)
.+.+++-.. +.... +....-. ....++..|.++.++++....+.|..+|+. ++..
T Consensus 221 ~~V~~i~r~~~G~~~~~~~~~~v~~~~-~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~ 299 (496)
T 3kya_A 221 PSVYIIKRNADGTFDDRSDIQLIAAYK-QCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNT 299 (496)
T ss_dssp EEEEEEECCTTSCCSTTSCEEEEEEES-CCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTT
T ss_pred ceEEEEecCCCCceeecccceeeccCC-CceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccc
Confidence 255665322 12210 1111111 224567778778888887777899999987 5543
Q ss_pred ---EEeecCCCCEEEEEECCCCcEE-EE-eCCCeEEEEeC--CCcee--eeEEeCC----------------CCceeeEE
Q 024372 181 ---VQTLETKSPVTSAEVSRDGRYI-TT-ADGSSVKFWDA--NHFGL--VKGYNMP----------------CNTESASL 235 (268)
Q Consensus 181 ---~~~~~~~~~v~~~~~s~~g~~l-~~-~~~~~v~~wd~--~~~~~--~~~~~~~----------------~~~~~~~~ 235 (268)
+...........++++|+|++| ++ .....|+.+|. ..... ..++... ..+....+
T Consensus 300 ~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~ 379 (496)
T 3kya_A 300 FKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVF 379 (496)
T ss_dssp EEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEE
T ss_pred cceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEE
Confidence 2223333446799999999843 33 34678888654 32211 0122110 01221223
Q ss_pred cC-------CCCCEEEeccCCCeEEEEECCCCcEE
Q 024372 236 EP-------KLGNIFIAGGEDMWVHVFDFHTGEQI 263 (268)
Q Consensus 236 ~~-------~~~~~~~~gs~d~~i~~wd~~~g~~~ 263 (268)
.. ..+.++++=..+..|+.++ .+|...
T Consensus 380 vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~v~ 413 (496)
T 3kya_A 380 VKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGIVS 413 (496)
T ss_dssp EECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCBEE
T ss_pred EccccccccCCCeEEEEECCCCEEEEEe-CCCCEE
Confidence 22 3467777777888999998 467543
No 289
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.85 E-value=0.00027 Score=64.85 Aligned_cols=224 Identities=6% Similarity=-0.104 Sum_probs=124.0
Q ss_pred CCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEE-EEeeCCCcEEEEeCCC----CCeeeeecc-CCeEEEEEECC
Q 024372 39 KDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFS-ASGSADFTAKLWDALT----GDEKHSFEH-KHIVRACAFSE 112 (268)
Q Consensus 39 ~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l-~s~s~D~~v~iw~~~~----~~~~~~~~~-~~~v~~v~~~~ 112 (268)
....|+..+....+....+... ..+..++|.+.+..| ++-...+.|+.+++.. ......+.. ......+++.+
T Consensus 384 ~~~~I~~id~~~~~~~~~~~~~-~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~ 462 (699)
T 1n7d_A 384 NRHEVRKMTLDRSEYTSLIPNL-RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDW 462 (699)
T ss_dssp CTTC-CEECTTSCCEECCSCCC-TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCC
T ss_pred CccceEEEeCCCCcceeeeccC-cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEe
Confidence 3456777777666655444332 345567888765544 4445668899888865 222222211 11234577775
Q ss_pred C-CCEEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEeeCC-CeEEEEeCCCCceEEeec-CCCC
Q 024372 113 D-THLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDS-GGVRLWDARSGKIVQTLE-TKSP 189 (268)
Q Consensus 113 ~-~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d-~~i~iwd~~~~~~~~~~~-~~~~ 189 (268)
. ++++++-...+.|.++++.... ..............+++.|.++.++.+-... +.|...++........+. .-..
T Consensus 463 ~~g~LY~tD~~~~~I~v~d~dg~~-~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~ 541 (699)
T 1n7d_A 463 IHSNIYWTDSVLGTVSVADTKGVK-RKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQW 541 (699)
T ss_dssp SSSBCEECCTTTSCEEEEBSSSCC-EEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSS
T ss_pred eCCcEEEEeccCCeEEEEecCCCc-eEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCC
Confidence 4 4444554566788888875322 1111111112345677777667666654332 577777765322211121 1234
Q ss_pred EEEEEECCCCc-EEEEe-CCCeEEEEeCCCceeeeEEeC---CCCceeeEEcCCCCCEEEeccCCCeEEEEECCCCcEEe
Q 024372 190 VTSAEVSRDGR-YITTA-DGSSVKFWDANHFGLVKGYNM---PCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIA 264 (268)
Q Consensus 190 v~~~~~s~~g~-~l~~~-~~~~v~~wd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~gs~d~~i~~wd~~~g~~~~ 264 (268)
.+.|+++|++. +..+. ..+.|..+|+........... -..+..+++.. +.++++....+.|..+|..+|+.+.
T Consensus 542 PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~--~~lywtd~~~~~V~~~d~~~G~~~~ 619 (699)
T 1n7d_A 542 PNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE--DKVFWTDIINEAIFSANRLTGSDVN 619 (699)
T ss_dssp CCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEET--TEEEEECSTTTCEEEEETTTEEEEE
T ss_pred ccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEEC--CEEEEEeCCCCeEEEEEccCCCceE
Confidence 67899998754 43443 457899999864322211111 12234455543 5777787778889999988888776
Q ss_pred ec
Q 024372 265 IT 266 (268)
Q Consensus 265 ~~ 266 (268)
++
T Consensus 620 ~i 621 (699)
T 1n7d_A 620 LL 621 (699)
T ss_dssp CC
T ss_pred Ee
Confidence 54
No 290
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.84 E-value=0.005 Score=49.85 Aligned_cols=225 Identities=13% Similarity=0.127 Sum_probs=109.1
Q ss_pred CCcEEEEEe-CC-----CCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCC-----CcEEEEeCCCCC---e
Q 024372 30 DGFFLVSAS-KD-----SSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSAD-----FTAKLWDALTGD---E 95 (268)
Q Consensus 30 dg~~l~s~s-~d-----~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D-----~~v~iw~~~~~~---~ 95 (268)
++.+++.|+ .+ ..+.++|..++++...-..........+...++.+++.|+.+ ..+.++|..+.. -
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W 93 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVW 93 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCC
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCee
Confidence 445666666 33 356778988887553211111111111112356667777755 468888987765 2
Q ss_pred eeee--ccCCe-EEEEEECCCCCEEEEeeCC-----CeEEEEECCCCCCCCe-EecCCcccEEEEEEeCCCCcEEEEeeC
Q 024372 96 KHSF--EHKHI-VRACAFSEDTHLLLTGGFE-----KILRIFDLNRPDAPPR-EVGNSSGSIRTVAWLHSDQTILSSCTD 166 (268)
Q Consensus 96 ~~~~--~~~~~-v~~v~~~~~~~~l~s~~~d-----~~i~~~d~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~ 166 (268)
.... ..+.. -..+.+ ++++++.|+.+ ..+.+||+.+.+.... ........-..+. . ++ .+++.|+.
T Consensus 94 ~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~-~~-~iyv~GG~ 168 (301)
T 2vpj_A 94 YSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVV-A-SG-VIYCLGGY 168 (301)
T ss_dssp EEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEE-E-TT-EEEEECCB
T ss_pred EECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEE-E-CC-EEEEECCC
Confidence 2221 11111 112222 56777777654 3577888764321111 1111111111222 2 33 44444433
Q ss_pred C-----CeEEEEeCCCCceEEe--ecCCCCEEEEEECCCCcEEE-EeC-----CCeEEEEeCCCceeeeEEeCCCCc--e
Q 024372 167 S-----GGVRLWDARSGKIVQT--LETKSPVTSAEVSRDGRYIT-TAD-----GSSVKFWDANHFGLVKGYNMPCNT--E 231 (268)
Q Consensus 167 d-----~~i~iwd~~~~~~~~~--~~~~~~v~~~~~s~~g~~l~-~~~-----~~~v~~wd~~~~~~~~~~~~~~~~--~ 231 (268)
+ +.+.+||+.+.+=... +.....-.++... ++++++ ++. -..+.+||+++..-...-..+... .
T Consensus 169 ~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~ 247 (301)
T 2vpj_A 169 DGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL-NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYV 247 (301)
T ss_dssp CSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSC
T ss_pred CCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE-CCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccce
Confidence 2 4688999987653322 2111111122222 455544 443 246889999765433222222221 1
Q ss_pred eeEEcCCCCCEEEeccCC-----CeEEEEECCCCcE
Q 024372 232 SASLEPKLGNIFIAGGED-----MWVHVFDFHTGEQ 262 (268)
Q Consensus 232 ~~~~~~~~~~~~~~gs~d-----~~i~~wd~~~g~~ 262 (268)
..... ++++++.||.+ ..|.+||.++++-
T Consensus 248 ~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 281 (301)
T 2vpj_A 248 GATVL--RGRLYAIAGYDGNSLLSSIECYDPIIDSW 281 (301)
T ss_dssp EEEEE--TTEEEEECCBCSSSBEEEEEEEETTTTEE
T ss_pred eEEEE--CCEEEEEcCcCCCcccccEEEEcCCCCeE
Confidence 22222 57888888765 4688999877653
No 291
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.83 E-value=0.0097 Score=49.46 Aligned_cols=196 Identities=15% Similarity=0.260 Sum_probs=120.1
Q ss_pred ecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecC----CCc---EE-EEeeC--CCcEEEEeC--CC
Q 024372 25 SPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDA----NAL---FS-ASGSA--DFTAKLWDA--LT 92 (268)
Q Consensus 25 ~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~----~~~---~l-~s~s~--D~~v~iw~~--~~ 92 (268)
+|..|...+++.....+-+.++|. +|+.++.+.. +.+..+.+-| .+. ++ +|.-. +++|.++++ .+
T Consensus 34 ~~~dp~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~ 110 (355)
T 3amr_A 34 DPKTPQNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKN 110 (355)
T ss_dssp CSSCGGGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTT
T ss_pred CCCCCCccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCC
Confidence 465566677777777888999999 8999988864 4555555444 222 23 33334 589999966 34
Q ss_pred CCeeeeecc-------C-CeEEEEEE--CCC-CC-EEEEeeCCCeEEEEECCC---CCC---CCeEecCCcccEEEEEEe
Q 024372 93 GDEKHSFEH-------K-HIVRACAF--SED-TH-LLLTGGFEKILRIFDLNR---PDA---PPREVGNSSGSIRTVAWL 154 (268)
Q Consensus 93 ~~~~~~~~~-------~-~~v~~v~~--~~~-~~-~l~s~~~d~~i~~~d~~~---~~~---~~~~~~~~~~~v~~~~~~ 154 (268)
+. +..+.. . ..+..+++ +|. ++ +++....++.+..|++.. +.. ..+.+.. .+.+..+...
T Consensus 111 ~~-l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvD 188 (355)
T 3amr_A 111 GT-LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAAD 188 (355)
T ss_dssp CC-EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEE
T ss_pred Cc-eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEc
Confidence 33 333311 1 34455666 674 44 566777889998888732 111 1223322 2345555666
Q ss_pred CCCCcEEEEeeCCCeEEEEeCC-----CCceEEeecC---CCCEEEEEE--CCCCc-EEE-Ee-CCCeEEEEeCC-Ccee
Q 024372 155 HSDQTILSSCTDSGGVRLWDAR-----SGKIVQTLET---KSPVTSAEV--SRDGR-YIT-TA-DGSSVKFWDAN-HFGL 220 (268)
Q Consensus 155 ~~~~~~~~~~~~d~~i~iwd~~-----~~~~~~~~~~---~~~v~~~~~--s~~g~-~l~-~~-~~~~v~~wd~~-~~~~ 220 (268)
+..+.++++ -++..|..+|.+ +++.+..+.. ...+..+++ .++++ +|+ ++ .+....+||.+ +.+.
T Consensus 189 d~~g~Lyv~-eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~ 267 (355)
T 3amr_A 189 DEYGRLYIA-EEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKY 267 (355)
T ss_dssp TTTTEEEEE-ETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCE
T ss_pred CCCCeEEEe-cccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcE
Confidence 666666654 566667777755 3456655532 245788887 56665 554 44 35799999996 6677
Q ss_pred eeEEeC
Q 024372 221 VKGYNM 226 (268)
Q Consensus 221 ~~~~~~ 226 (268)
+..|..
T Consensus 268 vg~f~I 273 (355)
T 3amr_A 268 VADFRI 273 (355)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 777754
No 292
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.77 E-value=0.021 Score=51.60 Aligned_cols=223 Identities=9% Similarity=-0.090 Sum_probs=134.7
Q ss_pred CCCCeEEeeCCCCCeEEEee-CccCcEEEEEecCCCc-EEEEeeCCCcEEEEeCCCCCeeeeeccC-CeEEEEEECCCCC
Q 024372 39 KDSSPMLRNGETGDWIGTFE-GHKGAVWSCCLDANAL-FSASGSADFTAKLWDALTGDEKHSFEHK-HIVRACAFSEDTH 115 (268)
Q Consensus 39 ~d~~i~iw~~~~~~~~~~~~-~h~~~V~~~~~~~~~~-~l~s~s~D~~v~iw~~~~~~~~~~~~~~-~~v~~v~~~~~~~ 115 (268)
....|+..++...+....+. ..-..+..++|++.+. +..+-..++.|+.+++........+... .....+++.+.+.
T Consensus 13 ~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~ 92 (628)
T 4a0p_A 13 RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGK 92 (628)
T ss_dssp ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTT
T ss_pred eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCC
Confidence 45667777776554333222 1224567899997654 4456667888998888665443333322 2355788877544
Q ss_pred -EEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEeeC-CCeEEEEeCCCCceEEeecCCCCEEEE
Q 024372 116 -LLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTD-SGGVRLWDARSGKIVQTLETKSPVTSA 193 (268)
Q Consensus 116 -~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-d~~i~iwd~~~~~~~~~~~~~~~v~~~ 193 (268)
+..+-...+.|.+.++.... ........-.....++..|..+.++.+-.. .+.|...++...........-...+.+
T Consensus 93 ~LY~tD~~~~~I~v~~~dG~~-~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~~~~P~Gl 171 (628)
T 4a0p_A 93 NLYWADTGTNRIEVSKLDGQH-RQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPNVGRANGL 171 (628)
T ss_dssp EEEEEETTTTEEEEEETTSTT-CEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSCSSEEEE
T ss_pred EEEEEECCCCEEEEEecCCCc-EEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECCCCCcceE
Confidence 44455566788888876432 212221222345788888877777776422 467888887654433333444568899
Q ss_pred EECCCCcEEE-E-eCCCeEEEEeCCCceeeeEEe-CCCCceeeEEcCCCCCEEEeccCCCeEEEEECCCCcEEee
Q 024372 194 EVSRDGRYIT-T-ADGSSVKFWDANHFGLVKGYN-MPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIAI 265 (268)
Q Consensus 194 ~~s~~g~~l~-~-~~~~~v~~wd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~gs~d~~i~~wd~~~g~~~~~ 265 (268)
++++++..|. + ...+.|...|+..... +.+. ....+..+++.. +.++++-...+.|...|-.+|+.+.+
T Consensus 172 alD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~--~~ly~tD~~~~~I~~~dk~tg~~~~~ 243 (628)
T 4a0p_A 172 TIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQ--DYIYWTDWSRRSIERANKTSGQNRTI 243 (628)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEET--TEEEEEETTTTEEEEEETTTCCSCEE
T ss_pred EEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEEEEC--CEEEEecCCCCEEEEEECCCCCceEE
Confidence 9999765543 3 3457899999865322 2222 222345555543 67777777788899999777765433
No 293
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.75 E-value=0.012 Score=48.44 Aligned_cols=188 Identities=10% Similarity=0.061 Sum_probs=105.8
Q ss_pred CCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCC-eEEEeeCccCcEEEEEecCCCcEEEEeeCCCcEEEEeC--CCC
Q 024372 17 RPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGD-WIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDA--LTG 93 (268)
Q Consensus 17 ~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~-~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw~~--~~~ 93 (268)
+.+..+.+.+ ++..++.+ .++.+. .....|+ +......+...+..+.+.+++.+++.+...+..+-+|- .+-
T Consensus 122 ~~~~~i~~~~---~~~~~~~~-~~g~v~-~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW 196 (327)
T 2xbg_A 122 GSPRLIKALG---NGSAEMIT-NVGAIY-RTKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAW 196 (327)
T ss_dssp SCEEEEEEEE---TTEEEEEE-TTCCEE-EESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSC
T ss_pred CCeEEEEEEC---CCCEEEEe-CCccEE-EEcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCce
Confidence 4466777753 45555544 455442 1222243 44444456677899999998888776654444444553 111
Q ss_pred CeeeeeccCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCC-CCeEec--CCcccEEEEEEeCCCCcEEEEeeCCCeE
Q 024372 94 DEKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDA-PPREVG--NSSGSIRTVAWLHSDQTILSSCTDSGGV 170 (268)
Q Consensus 94 ~~~~~~~~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~-~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~d~~i 170 (268)
... .......+..+.+.+++.+++. +.++.+.+.+...+.. ...... .....+..+.+.+++ .+++++. ++.|
T Consensus 197 ~~~-~~~~~~~~~~~~~~~~g~~~~~-~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~-~~~~~g~-~g~i 272 (327)
T 2xbg_A 197 EPH-NRTTSRRLHNMGFTPDGRLWMI-VNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPN-EVWLAGG-AGAL 272 (327)
T ss_dssp EEE-ECCSSSCEEEEEECTTSCEEEE-ETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSS-CEEEEES-TTCE
T ss_pred eEC-CCCCCCccceeEECCCCCEEEE-eCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCC-EEEEEeC-CCeE
Confidence 222 2234456778888898876654 4567776663211110 000001 112247788887654 4555554 4766
Q ss_pred EEEeCCCCceEEeec----CCCCEEEEEECCCCcEEEEeCCCeEEEEe
Q 024372 171 RLWDARSGKIVQTLE----TKSPVTSAEVSRDGRYITTADGSSVKFWD 214 (268)
Q Consensus 171 ~iwd~~~~~~~~~~~----~~~~v~~~~~s~~g~~l~~~~~~~v~~wd 214 (268)
++....|+.-..+. ....+..+.+.+++++++.+.++.|.-++
T Consensus 273 -~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 273 -LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQGFILGQKGILLRYV 319 (327)
T ss_dssp -EEESSTTSSCEECGGGTTSSSCCCEEEEEETTEEEEECSTTEEEEEC
T ss_pred -EEeCCCCcccEEcCccCCCCCCeEEEEEECCCceEEEcCCceEEEEc
Confidence 45555565544443 13457788888788888888888776655
No 294
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.72 E-value=0.02 Score=49.97 Aligned_cols=240 Identities=6% Similarity=-0.035 Sum_probs=134.6
Q ss_pred eeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeC---ccCcEEEEEe-------cCCCcEEEEeeCCC-----
Q 024372 19 VVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEG---HKGAVWSCCL-------DANALFSASGSADF----- 83 (268)
Q Consensus 19 v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~---h~~~V~~~~~-------~~~~~~l~s~s~D~----- 83 (268)
...|+|.|. .++++.++.-..+.|++.|..++.....+.. .......++| ++++.+|..+...+
T Consensus 141 p~~la~dp~-~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 141 NGRLAFDPL-NKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp EEEEEEETT-EEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCEEEEccC-CCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 457888852 1344555444446677888887765543332 1234788999 99998554444332
Q ss_pred --cEEEEeCCC-CCee-----eeeccCCeEEEEEECC-CCCEEEEeeCCCeEEEEECC-------CCCC------C----
Q 024372 84 --TAKLWDALT-GDEK-----HSFEHKHIVRACAFSE-DTHLLLTGGFEKILRIFDLN-------RPDA------P---- 137 (268)
Q Consensus 84 --~v~iw~~~~-~~~~-----~~~~~~~~v~~v~~~~-~~~~l~s~~~d~~i~~~d~~-------~~~~------~---- 137 (268)
.|.+.+... +... ..+........++++| ++.++++-..++.|..+|+. ++.. .
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~ 299 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNT 299 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTT
T ss_pred CceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccc
Confidence 255665433 1111 1221111234567899 55666666677889999986 4432 0
Q ss_pred C-eEe-cCCcccEEEEEEeCCCCcEEEEeeCCCeEEEEeC--CCCce--EEee----cCC------------CCEE-EEE
Q 024372 138 P-REV-GNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDA--RSGKI--VQTL----ETK------------SPVT-SAE 194 (268)
Q Consensus 138 ~-~~~-~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~iwd~--~~~~~--~~~~----~~~------------~~v~-~~~ 194 (268)
. ... ......-..+++.|++..++++-+..+.|+.+|. .++.. ..++ ... .... .++
T Consensus 300 ~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~ 379 (496)
T 3kya_A 300 FKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVF 379 (496)
T ss_dssp EEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEE
T ss_pred cceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEE
Confidence 0 111 1122345789999988766666666688998654 43321 0111 000 1234 455
Q ss_pred EC-------CCCcEEEEe-CCCeEEEEeCCCceeeeEEeCC-------------------------CCceeeEEcCCCCC
Q 024372 195 VS-------RDGRYITTA-DGSSVKFWDANHFGLVKGYNMP-------------------------CNTESASLEPKLGN 241 (268)
Q Consensus 195 ~s-------~~g~~l~~~-~~~~v~~wd~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~ 241 (268)
.. ++|.++++- .+..||.++.. + .+.++... ..+..+++.+..+.
T Consensus 380 vd~~~~~~~~~g~lyVaD~~N~rIr~i~~~-G-~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~ 457 (496)
T 3kya_A 380 VKNPDYTGEEEYDFYFVDRLNFCVRKVTPE-G-IVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEM 457 (496)
T ss_dssp EECTTCCSSCCEEEEEEEGGGTEEEEECTT-C-BEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTE
T ss_pred EccccccccCCCeEEEEECCCCEEEEEeCC-C-CEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCE
Confidence 64 567666664 56889999843 3 34444321 01234555553377
Q ss_pred EEEeccCCCeEEEEECCCCc
Q 024372 242 IFIAGGEDMWVHVFDFHTGE 261 (268)
Q Consensus 242 ~~~~gs~d~~i~~wd~~~g~ 261 (268)
++++=+.+..|+.++++...
T Consensus 458 lyVaD~~N~rIrki~~~~~~ 477 (496)
T 3kya_A 458 FYVHDQVGHTIRTISMEQEE 477 (496)
T ss_dssp EEEEETTTTEEEEEEECCCC
T ss_pred EEEEeCCCCEEEEEECCCCc
Confidence 77777778889888876433
No 295
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.62 E-value=0.043 Score=50.97 Aligned_cols=201 Identities=12% Similarity=-0.068 Sum_probs=117.4
Q ss_pred CCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCC----CeEEEeeCccCcEEEEEecCCC-cEEEEeeCCCcEEEEeC
Q 024372 16 SRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETG----DWIGTFEGHKGAVWSCCLDANA-LFSASGSADFTAKLWDA 90 (268)
Q Consensus 16 ~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~----~~~~~~~~h~~~V~~~~~~~~~-~~l~s~s~D~~v~iw~~ 90 (268)
...+.+++|.+. ++.+..+-...+.|+.+++... +....+.........+++.+.+ .+.++-...+.|.+.++
T Consensus 423 ~~~~~gl~~d~~--~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~l 500 (791)
T 3m0c_C 423 LRNVVALDTEVA--SNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADT 500 (791)
T ss_dssp CSSEEEEEEETT--TTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CCceEEEeeccc--CCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeC
Confidence 344567888752 4555555555666766666532 2222333233455678888766 44556667789999998
Q ss_pred CCCCeeeeec-cCCeEEEEEECCCCCEEEEeeC--CCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEeeCC
Q 024372 91 LTGDEKHSFE-HKHIVRACAFSEDTHLLLTGGF--EKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDS 167 (268)
Q Consensus 91 ~~~~~~~~~~-~~~~v~~v~~~~~~~~l~s~~~--d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d 167 (268)
........+. .....+.|++.|....|+.+.+ .+.|...++... ...............|++.+.++.|+.+-...
T Consensus 501 dG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~-~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~ 579 (791)
T 3m0c_C 501 KGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSLVTENIQWPNGITLDLLSGRLYWVDSKL 579 (791)
T ss_dssp TSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-CEEEEECSSCSCEEEEEEETTTTEEEEEETTT
T ss_pred CCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCC-ceEEEEeCCCCCceEEEEecCCCeEEEEeCCC
Confidence 7554433332 2235778999997555555443 267888887532 22122222224567889888888887776666
Q ss_pred CeEEEEeCCCCceEEeecC---CCCEEEEEECCCCcEEEEeCCCeEEEEeCCCce
Q 024372 168 GGVRLWDARSGKIVQTLET---KSPVTSAEVSRDGRYITTADGSSVKFWDANHFG 219 (268)
Q Consensus 168 ~~i~iwd~~~~~~~~~~~~---~~~v~~~~~s~~g~~l~~~~~~~v~~wd~~~~~ 219 (268)
+.|...|+........+.. -.....+++..+.-|++-...+.|...|..+++
T Consensus 580 ~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~~lYwtD~~~~~I~~~dk~tG~ 634 (791)
T 3m0c_C 580 HSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGS 634 (791)
T ss_dssp TEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred CcEEEEecCCCceEEEecCCCccCCCCEEEEeCCEEEEEECCCCEEEEEeCCCCc
Confidence 7899999865443333322 123557777555333333355778777765543
No 296
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.50 E-value=0.019 Score=46.43 Aligned_cols=222 Identities=14% Similarity=0.160 Sum_probs=105.2
Q ss_pred CcEEEEEeCC----CCeEEeeCCCCCeEEEeeCccCcE-EEEEecCCCcEEEEeeCC-----CcEEEEeCCCCCeeeee-
Q 024372 31 GFFLVSASKD----SSPMLRNGETGDWIGTFEGHKGAV-WSCCLDANALFSASGSAD-----FTAKLWDALTGDEKHSF- 99 (268)
Q Consensus 31 g~~l~s~s~d----~~i~iw~~~~~~~~~~~~~h~~~V-~~~~~~~~~~~l~s~s~D-----~~v~iw~~~~~~~~~~~- 99 (268)
+.+++.|+.+ ..+..+|..+.++...-.-..... .+++ ..++.+++.|+.+ ..+.++|..+..-...-
T Consensus 16 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~ 94 (302)
T 2xn4_A 16 KLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMV-YMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVAN 94 (302)
T ss_dssp EEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEE-EETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECC
T ss_pred CEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEE-EECCEEEEEeCcCCCccccceEEECCCCCceeeCCC
Confidence 4455566544 346678888876543211111111 1111 2256677777755 35778887765422211
Q ss_pred -ccCCe-EEEEEECCCCCEEEEeeCCC-----eEEEEECCCCCCCCeEec---CCcccEEEEEEeCCCCcEEEEeeC---
Q 024372 100 -EHKHI-VRACAFSEDTHLLLTGGFEK-----ILRIFDLNRPDAPPREVG---NSSGSIRTVAWLHSDQTILSSCTD--- 166 (268)
Q Consensus 100 -~~~~~-v~~v~~~~~~~~l~s~~~d~-----~i~~~d~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~~~~~~--- 166 (268)
..... -..+.+ ++++++.|+.++ .+..||+.+..- .... .....-..+. . ++..++.+|.+
T Consensus 95 ~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W--~~~~~~p~~r~~~~~~~-~-~~~iyv~GG~~~~~ 168 (302)
T 2xn4_A 95 MRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEW--FHVAPMNTRRSSVGVGV-V-GGLLYAVGGYDVAS 168 (302)
T ss_dssp CSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEE--EEECCCSSCCBSCEEEE-E-TTEEEEECCEETTT
T ss_pred CCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeE--eecCCCCCcccCceEEE-E-CCEEEEEeCCCCCC
Confidence 11111 111222 567777777553 466778754321 1111 1111111222 2 33333433321
Q ss_pred ---CCeEEEEeCCCCceEEe--ecCCCCEEEEEECCCCcEEE-EeCC-----CeEEEEeCCCceeeeEEeCCCC--ceee
Q 024372 167 ---SGGVRLWDARSGKIVQT--LETKSPVTSAEVSRDGRYIT-TADG-----SSVKFWDANHFGLVKGYNMPCN--TESA 233 (268)
Q Consensus 167 ---d~~i~iwd~~~~~~~~~--~~~~~~v~~~~~s~~g~~l~-~~~~-----~~v~~wd~~~~~~~~~~~~~~~--~~~~ 233 (268)
-+.+.+||+.+.+=... +.....-.+++.. ++++++ ++.+ ..+.+||.++..-...-..+.. ....
T Consensus 169 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~ 247 (302)
T 2xn4_A 169 RQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL-NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGV 247 (302)
T ss_dssp TEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEE
T ss_pred CccccEEEEEeCCCCcEEECCCCccccccccEEEE-CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeE
Confidence 23588999987653322 2211111122222 455544 4432 4688999876543322222221 1122
Q ss_pred EEcCCCCCEEEeccCCC-----eEEEEECCCCcE
Q 024372 234 SLEPKLGNIFIAGGEDM-----WVHVFDFHTGEQ 262 (268)
Q Consensus 234 ~~~~~~~~~~~~gs~d~-----~i~~wd~~~g~~ 262 (268)
+.. ++++++.||.++ .+.+||..+++-
T Consensus 248 ~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 279 (302)
T 2xn4_A 248 CAV--NGLLYVVGGDDGSCNLASVEYYNPTTDKW 279 (302)
T ss_dssp EEE--TTEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred EEE--CCEEEEECCcCCCcccccEEEEcCCCCeE
Confidence 222 578888888653 489999887654
No 297
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.49 E-value=0.054 Score=48.94 Aligned_cols=197 Identities=7% Similarity=-0.079 Sum_probs=117.6
Q ss_pred CCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCc-EEEEeeCCCcEEEEeCCCCCe
Q 024372 17 RPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANAL-FSASGSADFTAKLWDALTGDE 95 (268)
Q Consensus 17 ~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~-~l~s~s~D~~v~iw~~~~~~~ 95 (268)
....+++|++ .++....+-..++.|..++.........+..-......+++.+.+. +..+-...+.|.+.++.....
T Consensus 37 ~~~~~l~~d~--~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~ 114 (628)
T 4a0p_A 37 KEASALDFDV--TDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHR 114 (628)
T ss_dssp SCEEEEEEET--TTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTC
T ss_pred CceEEEEEEC--CCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcE
Confidence 3456888886 3455555666677777777654433323332223456778876544 445656678888888865443
Q ss_pred eeee-ccCCeEEEEEECCCCCEEEEeeC--CCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEeeCCCeEEE
Q 024372 96 KHSF-EHKHIVRACAFSEDTHLLLTGGF--EKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRL 172 (268)
Q Consensus 96 ~~~~-~~~~~v~~v~~~~~~~~l~s~~~--d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~i 172 (268)
...+ ..-...+.+++.|....|+-..+ ...|...++.... ...+.........+++.+.++.++.+-...+.|..
T Consensus 115 ~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~--~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~ 192 (628)
T 4a0p_A 115 QVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSE--RTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIES 192 (628)
T ss_dssp EEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS--CEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCc--eEEEECCCCCcceEEEccccCEEEEEECCCCEEEE
Confidence 2222 22234678999985445554442 4677777775332 22222233456788988888888888777789999
Q ss_pred EeCCCCceEEee-cCCCCEEEEEECCCCcEEEEeCCCeEEEEeCCCc
Q 024372 173 WDARSGKIVQTL-ETKSPVTSAEVSRDGRYITTADGSSVKFWDANHF 218 (268)
Q Consensus 173 wd~~~~~~~~~~-~~~~~v~~~~~s~~g~~l~~~~~~~v~~wd~~~~ 218 (268)
.|+..... +.+ ........+++..+.-|++-...+.|...|..++
T Consensus 193 ~d~dG~~~-~v~~~~l~~P~glav~~~~ly~tD~~~~~I~~~dk~tg 238 (628)
T 4a0p_A 193 SNMLGLNR-EVIADDLPHPFGLTQYQDYIYWTDWSRRSIERANKTSG 238 (628)
T ss_dssp EETTSCSC-EEEEECCSCEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred EcCCCCce-EEeeccCCCceEEEEECCEEEEecCCCCEEEEEECCCC
Confidence 99875433 222 2223356788876433333334678888886544
No 298
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.47 E-value=0.019 Score=46.47 Aligned_cols=220 Identities=10% Similarity=0.089 Sum_probs=106.7
Q ss_pred cEEEEEeCC--CCeEEeeCCCCCeEEE--eeCccCcEEEEEecCCCcEEEEeeCC----CcEEEEeCCCCCeeeeec--c
Q 024372 32 FFLVSASKD--SSPMLRNGETGDWIGT--FEGHKGAVWSCCLDANALFSASGSAD----FTAKLWDALTGDEKHSFE--H 101 (268)
Q Consensus 32 ~~l~s~s~d--~~i~iw~~~~~~~~~~--~~~h~~~V~~~~~~~~~~~l~s~s~D----~~v~iw~~~~~~~~~~~~--~ 101 (268)
.+++.|+.+ ..+.++|..++++... +......-..+ ..++.+++.|+.+ ..+.++|..++.-..... .
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~--~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~ 90 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACV--FWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPT 90 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEE--EETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSS
T ss_pred eEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEE--EECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCc
Confidence 455555543 4667789888876532 11111111111 2256667777755 567788887764322211 1
Q ss_pred CCe-EEEEEECCCCCEEEEeeCC------CeEEEEECCCCCCCCeEec---CCcccEEEEEEeCCCCcEEEEeeC-----
Q 024372 102 KHI-VRACAFSEDTHLLLTGGFE------KILRIFDLNRPDAPPREVG---NSSGSIRTVAWLHSDQTILSSCTD----- 166 (268)
Q Consensus 102 ~~~-v~~v~~~~~~~~l~s~~~d------~~i~~~d~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~~~~~~----- 166 (268)
... -..+.+ ++++++.|+.+ ..+.+||+.+... .... .....-..+. . ++..++.+|..
T Consensus 91 ~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W--~~~~~~p~~r~~~~~~~-~-~~~iyv~GG~~~~~~~ 164 (306)
T 3ii7_A 91 PRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESW--HTKPSMLTQRCSHGMVE-A-NGLIYVCGGSLGNNVS 164 (306)
T ss_dssp CCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEE--EEECCCSSCCBSCEEEE-E-TTEEEEECCEESCTTT
T ss_pred cccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCce--EeCCCCcCCcceeEEEE-E-CCEEEEECCCCCCCCc
Confidence 111 111222 56777777765 4577888764321 1111 1111111222 2 33333433321
Q ss_pred ---CCeEEEEeCCCCceEEe--ecCCCCEEEEEECCCCcEEEE-eCC-----CeEEEEeCCCceeeeEEeCCCC--ceee
Q 024372 167 ---SGGVRLWDARSGKIVQT--LETKSPVTSAEVSRDGRYITT-ADG-----SSVKFWDANHFGLVKGYNMPCN--TESA 233 (268)
Q Consensus 167 ---d~~i~iwd~~~~~~~~~--~~~~~~v~~~~~s~~g~~l~~-~~~-----~~v~~wd~~~~~~~~~~~~~~~--~~~~ 233 (268)
-+.+.+||+.+.+=... +.....-.++... ++++++. +.+ ..+.+||+.+..-...-..+.. ....
T Consensus 165 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~ 243 (306)
T 3ii7_A 165 GRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV-KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKC 243 (306)
T ss_dssp CEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEE
T ss_pred ccccceEEEeCCCCCeEEECCCccchhhcceEEEE-CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeE
Confidence 24588999987753222 2111111122222 5555443 321 4688899876433222122221 1122
Q ss_pred EEcCCCCCEEEeccCC-----CeEEEEECCCCcE
Q 024372 234 SLEPKLGNIFIAGGED-----MWVHVFDFHTGEQ 262 (268)
Q Consensus 234 ~~~~~~~~~~~~gs~d-----~~i~~wd~~~g~~ 262 (268)
... ++++++.||.+ ..+.+||.++.+-
T Consensus 244 ~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W 275 (306)
T 3ii7_A 244 AAV--GSIVYVLAGFQGVGRLGHILEYNTETDKW 275 (306)
T ss_dssp EEE--TTEEEEEECBCSSSBCCEEEEEETTTTEE
T ss_pred EEE--CCEEEEEeCcCCCeeeeeEEEEcCCCCeE
Confidence 222 57888888854 4689999887653
No 299
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.42 E-value=0.015 Score=47.28 Aligned_cols=225 Identities=13% Similarity=0.118 Sum_probs=107.2
Q ss_pred CCCcEEEEEeCC----CCeEEeeCCCCCeEEEeeCccCcE-EEEEecCCCcEEEEeeC----C-----CcEEEEeCCCCC
Q 024372 29 PDGFFLVSASKD----SSPMLRNGETGDWIGTFEGHKGAV-WSCCLDANALFSASGSA----D-----FTAKLWDALTGD 94 (268)
Q Consensus 29 ~dg~~l~s~s~d----~~i~iw~~~~~~~~~~~~~h~~~V-~~~~~~~~~~~l~s~s~----D-----~~v~iw~~~~~~ 94 (268)
-++.+++.|+.+ ..+.++|..++++...-....... .+++ ..++.+++.|+. + ..+.++|..+..
T Consensus 23 ~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~ 101 (308)
T 1zgk_A 23 VGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGC-VVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQ 101 (308)
T ss_dssp CCCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEE-EETTEEEEECCEEEETTEEEECCCEEEEETTTTE
T ss_pred CCCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEE-EECCEEEEECCCcCCCCCCeecceEEEECCCCCe
Confidence 356666767642 356788988887653211111110 1111 225666666665 2 457788887654
Q ss_pred eeeeec--cCC-eEEEEEECCCCCEEEEeeCC-----CeEEEEECCCCCCCC-eEecCCcccEEEEEEeCCCCcEEEEee
Q 024372 95 EKHSFE--HKH-IVRACAFSEDTHLLLTGGFE-----KILRIFDLNRPDAPP-REVGNSSGSIRTVAWLHSDQTILSSCT 165 (268)
Q Consensus 95 ~~~~~~--~~~-~v~~v~~~~~~~~l~s~~~d-----~~i~~~d~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~ 165 (268)
-...-. ... .-..+.+ ++++++.|+.+ ..+..||+.+.+... .........-..+. . ++ .+++.|+
T Consensus 102 W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~-~~-~iyv~GG 176 (308)
T 1zgk_A 102 WSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAV-L-NR-LLYAVGG 176 (308)
T ss_dssp EEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEE-E-TT-EEEEECC
T ss_pred EeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEE-E-CC-EEEEEeC
Confidence 222111 111 1112222 56777777643 356778875432100 00111111112222 2 33 4444443
Q ss_pred CC-----CeEEEEeCCCCceEEe--ecCCCCEEEEEECCCCcEEE-EeCC-----CeEEEEeCCCceeeeEEeCCCC--c
Q 024372 166 DS-----GGVRLWDARSGKIVQT--LETKSPVTSAEVSRDGRYIT-TADG-----SSVKFWDANHFGLVKGYNMPCN--T 230 (268)
Q Consensus 166 ~d-----~~i~iwd~~~~~~~~~--~~~~~~v~~~~~s~~g~~l~-~~~~-----~~v~~wd~~~~~~~~~~~~~~~--~ 230 (268)
.+ +.+.+||+.+.+=... +.....-.+++.. ++++++ ++.+ ..+.+||+.+..-...-..+.. .
T Consensus 177 ~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~ 255 (308)
T 1zgk_A 177 FDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL-HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSA 255 (308)
T ss_dssp BCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBS
T ss_pred CCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE-CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccc
Confidence 32 4588999987653221 1111111122222 555544 4332 4688999876543322222222 1
Q ss_pred eeeEEcCCCCCEEEeccCC-----CeEEEEECCCCcE
Q 024372 231 ESASLEPKLGNIFIAGGED-----MWVHVFDFHTGEQ 262 (268)
Q Consensus 231 ~~~~~~~~~~~~~~~gs~d-----~~i~~wd~~~g~~ 262 (268)
...... ++++++.||.+ ..+.+||..+.+-
T Consensus 256 ~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 290 (308)
T 1zgk_A 256 LGITVH--QGRIYVLGGYDGHTFLDSVECYDPDTDTW 290 (308)
T ss_dssp CEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEE
T ss_pred eEEEEE--CCEEEEEcCcCCCcccceEEEEcCCCCEE
Confidence 122222 47888888754 4588999887654
No 300
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.27 E-value=0.1 Score=47.11 Aligned_cols=198 Identities=7% Similarity=-0.089 Sum_probs=106.9
Q ss_pred CeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCe-EEEeeCccCcEEEEEecCCC-cEEEEeeCCCcEEEEeCCCCCe
Q 024372 18 PVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDW-IGTFEGHKGAVWSCCLDANA-LFSASGSADFTAKLWDALTGDE 95 (268)
Q Consensus 18 ~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~-~~~~~~h~~~V~~~~~~~~~-~~l~s~s~D~~v~iw~~~~~~~ 95 (268)
...+++|++ .++....+-...+.|..++...... ...+..--.....+++.+.+ .+..+-...+.|.+.++.....
T Consensus 41 ~~~~ld~~~--~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~ 118 (619)
T 3s94_A 41 DAAAVDFVF--SHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR 118 (619)
T ss_dssp CEEEEEEET--TTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred ceEEEEEEe--CCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCE
Confidence 345667765 2344444444445555555543321 22233222457788998854 4555666778999999865544
Q ss_pred eeee-ccCCeEEEEEECCCCCEEEEeeC--CCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEeeCCCeEEE
Q 024372 96 KHSF-EHKHIVRACAFSEDTHLLLTGGF--EKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRL 172 (268)
Q Consensus 96 ~~~~-~~~~~v~~v~~~~~~~~l~s~~~--d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~i 172 (268)
.... ..-...+.+++.|....|+-+.+ ...|...++.. ................+++.+.++.++.+-...+.|..
T Consensus 119 ~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG-~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~ 197 (619)
T 3s94_A 119 KVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDG-SSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHK 197 (619)
T ss_dssp EEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTS-CSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEE
T ss_pred EEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCC-CceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEE
Confidence 3333 22234567888886555554443 35666667643 22222222223356788888888888777666678999
Q ss_pred EeCCCCceEEeec-CCCCEEEEEECCCCcEEEEeCCCeEEEEeCCCc
Q 024372 173 WDARSGKIVQTLE-TKSPVTSAEVSRDGRYITTADGSSVKFWDANHF 218 (268)
Q Consensus 173 wd~~~~~~~~~~~-~~~~v~~~~~s~~g~~l~~~~~~~v~~wd~~~~ 218 (268)
.|+.......... .......+++.++.-|++-...+.|...|..++
T Consensus 198 ~~~dG~~~~~~~~~~~~~P~gi~~~~~~ly~td~~~~~V~~~d~~tg 244 (619)
T 3s94_A 198 SNLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWSTHSILACNKYTG 244 (619)
T ss_dssp ESSSCCEEC---------CCCEEESSSEEEEECTTTCSEEEEESSSC
T ss_pred ecCCCCccEEEEeCCCCCceEEEEeCCEEEEecCCCCEEEEEECCCC
Confidence 8886433222222 111234677776633333234567888887554
No 301
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.08 E-value=0.085 Score=42.85 Aligned_cols=219 Identities=12% Similarity=0.073 Sum_probs=103.0
Q ss_pred EEEEeCCCCeEEeeCCCCCeEE-EeeCccCcEEEEEecCCCcEEEEeeC----C---C----cEEEEeCCCCCeeeeecc
Q 024372 34 LVSASKDSSPMLRNGETGDWIG-TFEGHKGAVWSCCLDANALFSASGSA----D---F----TAKLWDALTGDEKHSFEH 101 (268)
Q Consensus 34 l~s~s~d~~i~iw~~~~~~~~~-~~~~h~~~V~~~~~~~~~~~l~s~s~----D---~----~v~iw~~~~~~~~~~~~~ 101 (268)
++.|+ ..+.+||..++++.. .+..........+...++.+++.|+. + . .+..||..++.=......
T Consensus 8 ~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~ 85 (315)
T 4asc_A 8 FMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPL 85 (315)
T ss_dssp EEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCB
T ss_pred EEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCC
Confidence 33444 567889999888653 22212222222333456677677763 1 1 266778776542221111
Q ss_pred CCe---EEEEEECCCCCEEEEeeCC--------CeEEEEECCCCCCC-CeEecCCcccEEEEEEeCCCCcEEEEeeC-C-
Q 024372 102 KHI---VRACAFSEDTHLLLTGGFE--------KILRIFDLNRPDAP-PREVGNSSGSIRTVAWLHSDQTILSSCTD-S- 167 (268)
Q Consensus 102 ~~~---v~~v~~~~~~~~l~s~~~d--------~~i~~~d~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-d- 167 (268)
+.+ -..+.+ ++++++.|+.+ ..+..||+.+.+-. ..........-..+. .++ .+++.|+. +
T Consensus 86 p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~-~iyv~GG~~~~ 160 (315)
T 4asc_A 86 PSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS--HMD-LVYVIGGKGSD 160 (315)
T ss_dssp SSCEESCEEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETT-EEEEECCBCTT
T ss_pred CcchhceeEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE--ECC-EEEEEeCCCCC
Confidence 111 111222 56677777742 44778887643210 000111111111222 233 34444433 1
Q ss_pred ----CeEEEEeCCCCceEEe--ecCCCCEEEEEECCCCcEE-EEeCC-----CeEEEEeCCCceeeeEEeCCCCc--eee
Q 024372 168 ----GGVRLWDARSGKIVQT--LETKSPVTSAEVSRDGRYI-TTADG-----SSVKFWDANHFGLVKGYNMPCNT--ESA 233 (268)
Q Consensus 168 ----~~i~iwd~~~~~~~~~--~~~~~~v~~~~~s~~g~~l-~~~~~-----~~v~~wd~~~~~~~~~~~~~~~~--~~~ 233 (268)
+.+.+||+.+.+=... +.....-.+++.. +++++ +++.+ ..+.+||+.+..-...-..+... ...
T Consensus 161 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~ 239 (315)
T 4asc_A 161 RKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH-DGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSL 239 (315)
T ss_dssp SCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEE
T ss_pred CcccceEEEEeCCCCeEEECCCCCCchhceEEEEE-CCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeE
Confidence 3688999987643221 1111111122222 45554 44432 25788898765433222222221 122
Q ss_pred EEcCCCCCEEEeccCCC--------------eEEEEECCCCcE
Q 024372 234 SLEPKLGNIFIAGGEDM--------------WVHVFDFHTGEQ 262 (268)
Q Consensus 234 ~~~~~~~~~~~~gs~d~--------------~i~~wd~~~g~~ 262 (268)
+.. .+++++.||.++ .|.+||.++.+=
T Consensus 240 ~~~--~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W 280 (315)
T 4asc_A 240 VSL--VGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKW 280 (315)
T ss_dssp EEE--TTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEE
T ss_pred EEE--CCEEEEECCccccCcCCccccccccCcEEEecCCCChh
Confidence 222 478888887642 478899877653
No 302
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.01 E-value=0.18 Score=45.41 Aligned_cols=201 Identities=6% Similarity=-0.131 Sum_probs=113.0
Q ss_pred CcEEEEEecCCCc-EEEEeeCCCcEEEEeCCCCCe-eeeeccC-CeEEEEEECCCCC-EEEEeeCCCeEEEEECCCCCCC
Q 024372 62 GAVWSCCLDANAL-FSASGSADFTAKLWDALTGDE-KHSFEHK-HIVRACAFSEDTH-LLLTGGFEKILRIFDLNRPDAP 137 (268)
Q Consensus 62 ~~V~~~~~~~~~~-~l~s~s~D~~v~iw~~~~~~~-~~~~~~~-~~v~~v~~~~~~~-~l~s~~~d~~i~~~d~~~~~~~ 137 (268)
.....++|++.+. ++.+-...+.|+.+++..... ...+... .....+++.+.+. +..+-...+.|.+.++.... .
T Consensus 40 ~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~-~ 118 (619)
T 3s94_A 40 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSL-R 118 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-C
T ss_pred CceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCC-E
Confidence 3456788887554 444555567888888765432 2222222 4567899988554 54555567889999986432 2
Q ss_pred CeEecCCcccEEEEEEeCCCCcEEEEeeC-CCeEEEEeCCCCceEEeec-CCCCEEEEEECCCCcEE-EEe-CCCeEEEE
Q 024372 138 PREVGNSSGSIRTVAWLHSDQTILSSCTD-SGGVRLWDARSGKIVQTLE-TKSPVTSAEVSRDGRYI-TTA-DGSSVKFW 213 (268)
Q Consensus 138 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~~g~~l-~~~-~~~~v~~w 213 (268)
.............+++.|.++.++.+-.. .+.|...++.......... .-...+.+++++++..| .+- ..+.|...
T Consensus 119 ~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~ 198 (619)
T 3s94_A 119 KVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKS 198 (619)
T ss_dssp EEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEE
T ss_pred EEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEe
Confidence 12221222334567888877777766432 3466666665332222222 23457899999875544 343 45688888
Q ss_pred eCCCceeeeEEe-CCCCceeeEEcCCCCCEEEeccCCCeEEEEECCCCcEEee
Q 024372 214 DANHFGLVKGYN-MPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQIAI 265 (268)
Q Consensus 214 d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~gs~d~~i~~wd~~~g~~~~~ 265 (268)
|+.......... ....+..+++.. +.++++-...+.|...|..+|+.+.+
T Consensus 199 ~~dG~~~~~~~~~~~~~P~gi~~~~--~~ly~td~~~~~V~~~d~~tg~~~~~ 249 (619)
T 3s94_A 199 NLDGTNRQAVVKGSLPHPFALTLFE--DILYWTDWSTHSILACNKYTGEGLRE 249 (619)
T ss_dssp SSSCCEEC---------CCCEEESS--SEEEEECTTTCSEEEEESSSCCCCEE
T ss_pred cCCCCccEEEEeCCCCCceEEEEeC--CEEEEecCCCCEEEEEECCCCcccEE
Confidence 886432221111 112234555543 46677767778899999888865443
No 303
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.99 E-value=0.097 Score=42.59 Aligned_cols=220 Identities=11% Similarity=0.090 Sum_probs=101.6
Q ss_pred EEEEEeCCCCeEEeeCCCCCeEE-EeeCccCcEEEEEecCCCcEEEEeeC----CC-------cEEEEeCCCCCeeeeec
Q 024372 33 FLVSASKDSSPMLRNGETGDWIG-TFEGHKGAVWSCCLDANALFSASGSA----DF-------TAKLWDALTGDEKHSFE 100 (268)
Q Consensus 33 ~l~s~s~d~~i~iw~~~~~~~~~-~~~~h~~~V~~~~~~~~~~~l~s~s~----D~-------~v~iw~~~~~~~~~~~~ 100 (268)
.++.|+. .+..||..++++.. .+..............++.+++.|+. ++ .+..+|..+..=...-.
T Consensus 18 i~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 95 (318)
T 2woz_A 18 ILLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPP 95 (318)
T ss_dssp EEEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSC
T ss_pred hhhcccc--ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCC
Confidence 3444443 36788999888754 12211122222233456667777773 11 16667776654222111
Q ss_pred --cCCe-EEEEEECCCCCEEEEeeCC-------CeEEEEECCCCCCCCeEecCCcccE--EEEEEeCCCCcEEEEeeC--
Q 024372 101 --HKHI-VRACAFSEDTHLLLTGGFE-------KILRIFDLNRPDAPPREVGNSSGSI--RTVAWLHSDQTILSSCTD-- 166 (268)
Q Consensus 101 --~~~~-v~~v~~~~~~~~l~s~~~d-------~~i~~~d~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~~~~~~~~-- 166 (268)
.+.. -..+.+ ++++++.|+.+ ..+..||+.+.+- ........+. .+++. .++..++.+|..
T Consensus 96 ~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W--~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~ 170 (318)
T 2woz_A 96 LPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKW--SEVKNLPIKVYGHNVIS-HNGMIYCLGGKTDD 170 (318)
T ss_dssp BSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEE--EEECCCSSCEESCEEEE-ETTEEEEECCEESS
T ss_pred CCccccccceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCE--eECCCCCCcccccEEEE-ECCEEEEEcCCCCC
Confidence 1111 111222 56777777754 2466778754321 1111000000 01121 234334444431
Q ss_pred ---CCeEEEEeCCCCceEEe--ecCCCCEEEEEECCCCcEE-EEeCC-----CeEEEEeCCCceeeeEEeCCCCc--eee
Q 024372 167 ---SGGVRLWDARSGKIVQT--LETKSPVTSAEVSRDGRYI-TTADG-----SSVKFWDANHFGLVKGYNMPCNT--ESA 233 (268)
Q Consensus 167 ---d~~i~iwd~~~~~~~~~--~~~~~~v~~~~~s~~g~~l-~~~~~-----~~v~~wd~~~~~~~~~~~~~~~~--~~~ 233 (268)
-+.+.++|+.+.+=... +.....-.+++.. +++++ +++.+ ..+.+||+.+.+-...-..+... ...
T Consensus 171 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~ 249 (318)
T 2woz_A 171 KKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH-KGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISL 249 (318)
T ss_dssp SCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEE
T ss_pred CCccceEEEEcCCCCEEEECCCCCCCcccceEEEE-CCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEE
Confidence 13588999987753222 2111111122333 44544 44421 35778898764332222222221 122
Q ss_pred EEcCCCCCEEEeccCC--------------CeEEEEECCCCcE
Q 024372 234 SLEPKLGNIFIAGGED--------------MWVHVFDFHTGEQ 262 (268)
Q Consensus 234 ~~~~~~~~~~~~gs~d--------------~~i~~wd~~~g~~ 262 (268)
... .+++++.||.+ ..+.+||..+.+=
T Consensus 250 ~~~--~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W 290 (318)
T 2woz_A 250 VSL--AGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEW 290 (318)
T ss_dssp EEE--TTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEE
T ss_pred EEE--CCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEe
Confidence 222 47888888754 3588899887654
No 304
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=96.97 E-value=0.096 Score=41.56 Aligned_cols=198 Identities=12% Similarity=0.124 Sum_probs=123.1
Q ss_pred EeeCccCcEEEEEecCCCcEE-EEeeCCCcEEEEeCCCCCeeeeeccC--CeEEEEEECCCCCEEEEeeCCCeEEEEECC
Q 024372 56 TFEGHKGAVWSCCLDANALFS-ASGSADFTAKLWDALTGDEKHSFEHK--HIVRACAFSEDTHLLLTGGFEKILRIFDLN 132 (268)
Q Consensus 56 ~~~~h~~~V~~~~~~~~~~~l-~s~s~D~~v~iw~~~~~~~~~~~~~~--~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~ 132 (268)
.+.+=...+..+++.|++..| +....++.|...|.. ++..+.+... .-.-.+++.+++.++++.-.++.+.++++.
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence 344545679999999876544 446668888888987 7777766433 235567778888776665566788888875
Q ss_pred CCCCC--CeEe------cCCcccEEEEEEeCCCCcEEEEeeCCC-eEEEEeC-CCCceEEeec--------CCCCEEEEE
Q 024372 133 RPDAP--PREV------GNSSGSIRTVAWLHSDQTILSSCTDSG-GVRLWDA-RSGKIVQTLE--------TKSPVTSAE 194 (268)
Q Consensus 133 ~~~~~--~~~~------~~~~~~v~~~~~~~~~~~~~~~~~~d~-~i~iwd~-~~~~~~~~~~--------~~~~v~~~~ 194 (268)
..... .... ...+.....++|.+.+..++++.-.+. .|..|+- .....+..+. .-....+++
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~ 179 (255)
T 3qqz_A 100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAE 179 (255)
T ss_dssp TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEE
T ss_pred CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEE
Confidence 43320 1111 112344688999998887777765533 4555551 1112222221 113467899
Q ss_pred ECCC-CcEEEEe-CCCeEEEEeCCCceeeeEEeCCC----------CceeeEEcCCCCCEEEeccCCCeEEEEEC
Q 024372 195 VSRD-GRYITTA-DGSSVKFWDANHFGLVKGYNMPC----------NTESASLEPKLGNIFIAGGEDMWVHVFDF 257 (268)
Q Consensus 195 ~s~~-g~~l~~~-~~~~v~~wd~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~gs~d~~i~~wd~ 257 (268)
++|. +++++.+ .++.+..+|.+ ++.+..+.... ...-+++.+ +|.++++ |+-..+|.+.-
T Consensus 180 ~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~-~G~lyIv-sE~n~~y~f~~ 251 (255)
T 3qqz_A 180 FNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDA-SGNIYIV-SEPNRFYRFTP 251 (255)
T ss_dssp EETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECT-TCCEEEE-ETTTEEEEEEC
T ss_pred EcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECC-CCCEEEE-cCCceEEEEEe
Confidence 9986 4555544 56788889976 44666665542 335677777 5886666 66667777754
No 305
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.88 E-value=0.14 Score=42.13 Aligned_cols=195 Identities=11% Similarity=0.078 Sum_probs=120.8
Q ss_pred eEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEE-EeeC----ccC--cEEEEEe---cCCCcEEEEee----------
Q 024372 21 DLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIG-TFEG----HKG--AVWSCCL---DANALFSASGS---------- 80 (268)
Q Consensus 21 ~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~-~~~~----h~~--~V~~~~~---~~~~~~l~s~s---------- 80 (268)
+++|++ .+|.++++.-..++|..|+...+.... .+.+ ... .+..+.+ .+++++++...
T Consensus 17 ~~~wd~--~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~ 94 (334)
T 2p9w_A 17 DTIYDR--TRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQ 94 (334)
T ss_dssp CEEEET--TTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSC
T ss_pred CccCcC--CCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccccc
Confidence 788875 356666666689999999998664332 3332 111 3578889 68887776432
Q ss_pred ---CCCcEEEEeCC---CCCeeeeecc-------------C-CeEEEEEECCCCCEEEEeeCC-CeEEEEECCCCCCCCe
Q 024372 81 ---ADFTAKLWDAL---TGDEKHSFEH-------------K-HIVRACAFSEDTHLLLTGGFE-KILRIFDLNRPDAPPR 139 (268)
Q Consensus 81 ---~D~~v~iw~~~---~~~~~~~~~~-------------~-~~v~~v~~~~~~~~l~s~~~d-~~i~~~d~~~~~~~~~ 139 (268)
.+..+..+|+. +++....... . .....+...++|+.-++++.. +.|...+... + ...
T Consensus 95 ~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG-~-~~~ 172 (334)
T 2p9w_A 95 SSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADG-K-TVS 172 (334)
T ss_dssp CSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTS-C-CEE
T ss_pred ccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCC-C-EEe
Confidence 26779999998 6766554421 1 247789999999999988888 8877777542 2 112
Q ss_pred Eec------CCcccEEEEEEeCCCCcEEEEeeCCCeEEEEeCCCCce--EEee--c---CCCCEEEE-EECCCCcEE-EE
Q 024372 140 EVG------NSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKI--VQTL--E---TKSPVTSA-EVSRDGRYI-TT 204 (268)
Q Consensus 140 ~~~------~~~~~v~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~--~~~~--~---~~~~v~~~-~~s~~g~~l-~~ 204 (268)
.+. ......+.+++.|++..+++.-+ .+.|.-+|+++... +..- . .-.....+ ..-.+|+.+ ++
T Consensus 173 ~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~ 251 (334)
T 2p9w_A 173 TFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-PRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVG 251 (334)
T ss_dssp EEEECCCCSSSCCSCSEEEEETTTTEEEEESS-SSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEEE
T ss_pred eeeecCCCcccccCcceEEEeCCCCEEEEEcC-CCeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEEEEEE
Confidence 111 11122457899998887777766 69999999885332 2211 1 11123343 344567764 33
Q ss_pred e-CCCeEEEEeCCCcee
Q 024372 205 A-DGSSVKFWDANHFGL 220 (268)
Q Consensus 205 ~-~~~~v~~wd~~~~~~ 220 (268)
. ..+.+.+.+...++.
T Consensus 252 ~~~~~~~~l~S~DgW~s 268 (334)
T 2p9w_A 252 ARAPYAISFRSWDNWKS 268 (334)
T ss_dssp EETTEEEEEECSSTTSE
T ss_pred cCCCCEEEEECCCCcce
Confidence 3 355666776655543
No 306
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.64 E-value=0.055 Score=44.87 Aligned_cols=107 Identities=11% Similarity=0.052 Sum_probs=65.8
Q ss_pred cEEEEEeCCCCeEEeeCCCCCeEEEeeCc-cCcEEEEEec---CCCcEEEEe-eCCCcEEEEeCCCCCeeeeeccC----
Q 024372 32 FFLVSASKDSSPMLRNGETGDWIGTFEGH-KGAVWSCCLD---ANALFSASG-SADFTAKLWDALTGDEKHSFEHK---- 102 (268)
Q Consensus 32 ~~l~s~s~d~~i~iw~~~~~~~~~~~~~h-~~~V~~~~~~---~~~~~l~s~-s~D~~v~iw~~~~~~~~~~~~~~---- 102 (268)
.+++.++.||.+.-.|..+|+.+=+++.- ..++....-. .++..++-. ..||.+..++..++.....+..+
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 47888999999999999999876555432 1233221111 123333333 58999999998887655444322
Q ss_pred -CeEEE----EEEC----CCCCEEEEeeCCCeEEEEECCCCCCCC
Q 024372 103 -HIVRA----CAFS----EDTHLLLTGGFEKILRIFDLNRPDAPP 138 (268)
Q Consensus 103 -~~v~~----v~~~----~~~~~l~s~~~d~~i~~~d~~~~~~~~ 138 (268)
.++.. +... ..+..+++|+.++.+...|+.+++...
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W 135 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIIS 135 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEE
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEE
Confidence 22221 0000 134578899999999999988876443
No 307
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.27 E-value=0.21 Score=41.23 Aligned_cols=55 Identities=9% Similarity=-0.066 Sum_probs=29.0
Q ss_pred eEEEEeCCCc--eeeeEEeCCCCceeeEEcCCCCCEEEeccCCC------eEEEEECCCCcEEee
Q 024372 209 SVKFWDANHF--GLVKGYNMPCNTESASLEPKLGNIFIAGGEDM------WVHVFDFHTGEQIAI 265 (268)
Q Consensus 209 ~v~~wd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~d~------~i~~wd~~~g~~~~~ 265 (268)
.+.+||+.+. ..+.....+...-... .. ++++++.||.+. .|.++++++++.+..
T Consensus 286 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~-~~-~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~ 348 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELSQGRAYGVSL-PW-NNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQ 348 (357)
T ss_dssp CCEEEECC---CEEEEECSSCCBSSEEE-EE-TTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEE
T ss_pred eEEEEecCCCceeeCCCCCCCcccceeE-Ee-CCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEee
Confidence 4678888654 3333322222211222 22 588888888542 466678887776653
No 308
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.24 E-value=0.39 Score=39.50 Aligned_cols=150 Identities=9% Similarity=0.038 Sum_probs=90.4
Q ss_pred EEEecCCC-cEEEEeeCCCcEEEEeCCCCCeee-eecc----C---CeEEEEEE---CCCCCEEEEee------------
Q 024372 66 SCCLDANA-LFSASGSADFTAKLWDALTGDEKH-SFEH----K---HIVRACAF---SEDTHLLLTGG------------ 121 (268)
Q Consensus 66 ~~~~~~~~-~~l~s~s~D~~v~iw~~~~~~~~~-~~~~----~---~~v~~v~~---~~~~~~l~s~~------------ 121 (268)
++.|.+.. .++++.-..++|..|+...+.... .+.. . ..+..+.+ .|+++++++..
T Consensus 17 ~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~ 96 (334)
T 2p9w_A 17 DTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSS 96 (334)
T ss_dssp CEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCS
T ss_pred CccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccccccc
Confidence 35676644 444555589999999987554322 2322 1 13578889 68877777533
Q ss_pred -CCCeEEEEECC---CCCCCCeEec-C-----------CcccEEEEEEeCCCCcEEEEeeCC-CeEEEEeCCCCceEEee
Q 024372 122 -FEKILRIFDLN---RPDAPPREVG-N-----------SSGSIRTVAWLHSDQTILSSCTDS-GGVRLWDARSGKIVQTL 184 (268)
Q Consensus 122 -~d~~i~~~d~~---~~~~~~~~~~-~-----------~~~~v~~~~~~~~~~~~~~~~~~d-~~i~iwd~~~~~~~~~~ 184 (268)
.++.+..||+. +++....... . .......++..+++. ..++++.. +.|...|.... .+..+
T Consensus 97 ~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~Gn-aYVt~s~~~~~I~rV~pdG~-~~~~~ 174 (334)
T 2p9w_A 97 HGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGN-SYVAFALGMPAIARVSADGK-TVSTF 174 (334)
T ss_dssp SSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSC-EEEEEEESSCEEEEECTTSC-CEEEE
T ss_pred CCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCC-EEEeCCCCCCeEEEEeCCCC-EEeee
Confidence 26778899987 5544322211 0 112356777776654 44445555 67766676533 22221
Q ss_pred --cC-----CCCEEEEEECCCCcEEEEe-CCCeEEEEeCCC
Q 024372 185 --ET-----KSPVTSAEVSRDGRYITTA-DGSSVKFWDANH 217 (268)
Q Consensus 185 --~~-----~~~v~~~~~s~~g~~l~~~-~~~~v~~wd~~~ 217 (268)
.. ....+.|+++|+|+.|+.. ..+.+..+|+..
T Consensus 175 ~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 175 AWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp EECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred eecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 11 1236799999999877654 467898899874
No 309
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=95.93 E-value=0.53 Score=40.14 Aligned_cols=102 Identities=11% Similarity=0.064 Sum_probs=67.5
Q ss_pred CCcEEEEEeCCCCeEEeeCCCCCeEEEeeCc----cCcEEEEEecCCCcEEEEeeCCCcEEEEeCCCCC-----------
Q 024372 30 DGFFLVSASKDSSPMLRNGETGDWIGTFEGH----KGAVWSCCLDANALFSASGSADFTAKLWDALTGD----------- 94 (268)
Q Consensus 30 dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h----~~~V~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~----------- 94 (268)
+|..++.+ .+..+|..++......+.+.-- -..|..+..+|+|.+||-.+ ++.|.|-.+-.+.
T Consensus 31 n~t~i~~a-~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~ 108 (452)
T 3pbp_A 31 NGTRIVFI-QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDA 108 (452)
T ss_dssp TTTEEEEE-ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHT
T ss_pred CCCEEEEE-ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccc
Confidence 45555544 4467777776644333344322 22577789999999987654 6688887765221
Q ss_pred -eeeeec-------cCCeEEEEEECC---CCCEEEEeeCCCeEEEEECCC
Q 024372 95 -EKHSFE-------HKHIVRACAFSE---DTHLLLTGGFEKILRIFDLNR 133 (268)
Q Consensus 95 -~~~~~~-------~~~~v~~v~~~~---~~~~l~s~~~d~~i~~~d~~~ 133 (268)
..+.+. ...+|..+.||| ++..|++-..|++||+||+..
T Consensus 109 ~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~ 158 (452)
T 3pbp_A 109 FQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILN 158 (452)
T ss_dssp TEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTC
T ss_pred cceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEccc
Confidence 111222 245799999999 457888999999999999975
No 310
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=95.79 E-value=0.67 Score=38.39 Aligned_cols=139 Identities=7% Similarity=0.007 Sum_probs=74.3
Q ss_pred cEEEEEecCCCcEEEEeeCCCcEEEEeCCCCCee--eeec----cCCeEEEEEECCC---CCEEEEeeC-C-----CeEE
Q 024372 63 AVWSCCLDANALFSASGSADFTAKLWDALTGDEK--HSFE----HKHIVRACAFSED---THLLLTGGF-E-----KILR 127 (268)
Q Consensus 63 ~V~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~--~~~~----~~~~v~~v~~~~~---~~~l~s~~~-d-----~~i~ 127 (268)
.-..++|.|++.++++- .++.|++++ .+... ..+. .......++++|+ +..|+.+.. . +.|.
T Consensus 32 ~P~~ia~~pdG~l~V~e-~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~ 108 (352)
T 2ism_A 32 VPWALAFLPDGGMLIAE-RPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV 108 (352)
T ss_dssp CEEEEEECTTSCEEEEE-TTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred CceEEEEcCCCeEEEEe-CCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence 45678999999876654 568999988 33321 1111 1235678999998 445554433 2 5677
Q ss_pred EEECCCCCC-----CCeEec---CCcccEEEEEEeCCCCcEEEEeeC------------CCeEEEEeCCC----------
Q 024372 128 IFDLNRPDA-----PPREVG---NSSGSIRTVAWLHSDQTILSSCTD------------SGGVRLWDARS---------- 177 (268)
Q Consensus 128 ~~d~~~~~~-----~~~~~~---~~~~~v~~~~~~~~~~~~~~~~~~------------d~~i~iwd~~~---------- 177 (268)
.|+...... ....+. ........+++.|++..+++.+.. .+.|.-+|...
T Consensus 109 r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~ 188 (352)
T 2ism_A 109 RLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLG 188 (352)
T ss_dssp EEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTT
T ss_pred EEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccC
Confidence 777653211 111111 001122467888877433433321 14565566542
Q ss_pred ----CceEEeecCCCCEEEEEECC-CCcEEEEe
Q 024372 178 ----GKIVQTLETKSPVTSAEVSR-DGRYITTA 205 (268)
Q Consensus 178 ----~~~~~~~~~~~~v~~~~~s~-~g~~l~~~ 205 (268)
...+.... ......++|+| +|+++++.
T Consensus 189 ~~~~~~~i~a~G-~rnp~g~a~d~~~g~l~v~d 220 (352)
T 2ism_A 189 RRGARPEVYSLG-HRNPQGLAWHPKTGELFSSE 220 (352)
T ss_dssp CTTSCTTEEEEC-CSEECCCEECTTTCCEEEEE
T ss_pred CCCCCccEEEEc-CCCcccEEEECCCCCEEEEE
Confidence 11122222 23366889999 67776654
No 311
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=95.74 E-value=0.73 Score=38.37 Aligned_cols=180 Identities=12% Similarity=0.122 Sum_probs=92.8
Q ss_pred EEEEecCCCcEEEEee------------CCCcEEEEeCCCCC-eeeeeccC--------CeEEEEEECC--CCC--EEEE
Q 024372 65 WSCCLDANALFSASGS------------ADFTAKLWDALTGD-EKHSFEHK--------HIVRACAFSE--DTH--LLLT 119 (268)
Q Consensus 65 ~~~~~~~~~~~l~s~s------------~D~~v~iw~~~~~~-~~~~~~~~--------~~v~~v~~~~--~~~--~l~s 119 (268)
..+.+.++|..+.+++ .+|.|.++|..+.. ....+... -....+.+.+ ++. ++++
T Consensus 53 EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vv 132 (355)
T 3sre_A 53 EDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVV 132 (355)
T ss_dssp CEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEE
T ss_pred ceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEE
Confidence 3455677776555542 68899999987421 11222111 1234455433 343 4444
Q ss_pred eeC--CCeEEEEECCCCCCCCe---Eec-CCcccEEEEEEeCCCCcEEEEee-----------------CCCeEEEEeCC
Q 024372 120 GGF--EKILRIFDLNRPDAPPR---EVG-NSSGSIRTVAWLHSDQTILSSCT-----------------DSGGVRLWDAR 176 (268)
Q Consensus 120 ~~~--d~~i~~~d~~~~~~~~~---~~~-~~~~~v~~~~~~~~~~~~~~~~~-----------------~d~~i~iwd~~ 176 (268)
-.. +..|.+|++........ ... ..-...+.+...+++.. .++.. ..+.|.-+|..
T Consensus 133 nh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~f-yvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~ 211 (355)
T 3sre_A 133 NHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHF-YATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN 211 (355)
T ss_dssp ECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEE-EEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT
T ss_pred ECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCE-EecCCcEeCCcccccchhhccCCccEEEEEECC
Confidence 232 46777777653322111 111 11234566777776653 33321 12455555553
Q ss_pred CCceEEeecCCCCEEEEEECCCCcEEEEe--CCCeEEEEeCCCc-e--eeeEEeCCCCceeeEEcCCCCCEEEecc
Q 024372 177 SGKIVQTLETKSPVTSAEVSRDGRYITTA--DGSSVKFWDANHF-G--LVKGYNMPCNTESASLEPKLGNIFIAGG 247 (268)
Q Consensus 177 ~~~~~~~~~~~~~v~~~~~s~~g~~l~~~--~~~~v~~wd~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~gs 247 (268)
++......-...+.++|+||++.+..+ ..+.|..||+... . ..+.+..+..+.-+.....+|.+.+++.
T Consensus 212 --~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~lwva~~ 285 (355)
T 3sre_A 212 --DVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGCH 285 (355)
T ss_dssp --CCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEEE
T ss_pred --eEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEeCCCCCceEEEeCCCCcEEEEec
Confidence 322222333457999999999866443 3578999998532 2 2234444433445555552378777654
No 312
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=95.63 E-value=1.8 Score=42.07 Aligned_cols=242 Identities=10% Similarity=0.013 Sum_probs=129.3
Q ss_pred CCCeeeEEEecCCC---CCcEEEEEeC-CCCeEEeeCCCCCeEEEeeC-ccCcEEEEEec--CCCcEEEEeeCCCcEEEE
Q 024372 16 SRPVVDLFYSPITP---DGFFLVSASK-DSSPMLRNGETGDWIGTFEG-HKGAVWSCCLD--ANALFSASGSADFTAKLW 88 (268)
Q Consensus 16 ~~~v~~~~f~~~~~---dg~~l~s~s~-d~~i~iw~~~~~~~~~~~~~-h~~~V~~~~~~--~~~~~l~s~s~D~~v~iw 88 (268)
.+.|.++++.|..+ .+.++|.|.. |++++|+++.+.+.+....- -.....++.+. ....+|..|-.||.+.-+
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~ 632 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYF 632 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEE
Confidence 45799999977432 2479999997 99999999987765543221 11233333332 234567778889987654
Q ss_pred --eCCCCCeeee---eccCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEE-EEeCCC-CcEE
Q 024372 89 --DALTGDEKHS---FEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTV-AWLHSD-QTIL 161 (268)
Q Consensus 89 --~~~~~~~~~~---~~~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~-~~~~~~-~~~~ 161 (268)
|..++..... +--..++.-..+...+..-+-+..++..-+|--+ +. .....-.-..+..+ .|+... +.-+
T Consensus 633 ~~d~~tg~l~d~r~~~LG~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~-~~--l~~s~l~~~~v~~~~~F~se~~~~g~ 709 (1158)
T 3ei3_A 633 GLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSN-HK--LVFSNVNLKEVNYMCPLNSDGYPDSL 709 (1158)
T ss_dssp EECTTTCCEEEEEEEECCSSCCEEEEEESSSCEEEEEESSSCEEEEESS-SS--EEEEEBSSSCCCEEEEECCSSSTTEE
T ss_pred EEcCCCCccccceeEEcCCCceEEEEEeeCCceeEEEECCCCEEEEEcC-Cc--eEEeccChHHhceEeccCcccCCCcE
Confidence 4444443211 1122344433343333222222223444444322 11 11111111123333 332221 2223
Q ss_pred EEeeCCCeEEEEeCCCCc--eEEeecCCCCEEEEEECCCCcEEE--EeC-------------------------------
Q 024372 162 SSCTDSGGVRLWDARSGK--IVQTLETKSPVTSAEVSRDGRYIT--TAD------------------------------- 206 (268)
Q Consensus 162 ~~~~~d~~i~iwd~~~~~--~~~~~~~~~~v~~~~~s~~g~~l~--~~~------------------------------- 206 (268)
+..+ ++.++|.-+...+ .+++++....+..++++|+.+.++ ++.
T Consensus 710 v~~~-~~~LrI~~i~~~~~~~~~~ipL~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (1158)
T 3ei3_A 710 ALAN-NSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKL 788 (1158)
T ss_dssp EEEC-SSCEEEEEECCSSSEEEEEEECSSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEECCCCC
T ss_pred EEEc-CCceEEEEecccCCeeEEEEeCCCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhccccccc
Confidence 3333 3679998875433 344556666788888888765432 211
Q ss_pred -----------------CCeEEEEeCCCceeeeEEeCCCCceeeE-----EcCCCCCEEEecc----------CCCeEEE
Q 024372 207 -----------------GSSVKFWDANHFGLVKGYNMPCNTESAS-----LEPKLGNIFIAGG----------EDMWVHV 254 (268)
Q Consensus 207 -----------------~~~v~~wd~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~gs----------~d~~i~~ 254 (268)
-..|++.|-.+++.+..+....+....+ +..+...+|+.|. ..|.|++
T Consensus 789 ~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~v 868 (1158)
T 3ei3_A 789 FSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVV 868 (1158)
T ss_dssp C----------CCCEEEEEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEE
T ss_pred ccccccCchhhcCCceeeEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEE
Confidence 0137788888888888887765543222 1222346787765 2368999
Q ss_pred EECCCCc
Q 024372 255 FDFHTGE 261 (268)
Q Consensus 255 wd~~~g~ 261 (268)
|++..++
T Consensus 869 f~v~~~k 875 (1158)
T 3ei3_A 869 FQYSDGK 875 (1158)
T ss_dssp EEEETTE
T ss_pred EEEECCE
Confidence 9986444
No 313
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=95.62 E-value=0.81 Score=38.09 Aligned_cols=134 Identities=18% Similarity=0.214 Sum_probs=72.7
Q ss_pred CCCeEEEEECCCCCCCCeEec--C-----CcccEEEEEEeC--CCC-cEEEEeeC--CCeEEEEeCCCC--c--eEEeec
Q 024372 122 FEKILRIFDLNRPDAPPREVG--N-----SSGSIRTVAWLH--SDQ-TILSSCTD--SGGVRLWDARSG--K--IVQTLE 185 (268)
Q Consensus 122 ~d~~i~~~d~~~~~~~~~~~~--~-----~~~~v~~~~~~~--~~~-~~~~~~~~--d~~i~iwd~~~~--~--~~~~~~ 185 (268)
.+|.|.++|+.++......+. . .......+.+.+ ++. .+++.... +.+|.+|++..+ . .+.++.
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~ 160 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR 160 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc
Confidence 688899999864322222211 1 112344555544 232 34444332 357777776543 2 233444
Q ss_pred CC--CCEEEEEECCCCcEEEEeC----C--------------CeEEEEeCCCceeeeEEeCCCCceeeEEcCCCCCE-EE
Q 024372 186 TK--SPVTSAEVSRDGRYITTAD----G--------------SSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNI-FI 244 (268)
Q Consensus 186 ~~--~~v~~~~~s~~g~~l~~~~----~--------------~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 244 (268)
+. ...+.+.+.++|.+.++.. + +.|..+|...-+. ....-..+.-++++| +++. ++
T Consensus 161 g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~~~~~--~~~~l~~pNGia~sp-Dg~~lYv 237 (355)
T 3sre_A 161 HKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDVRV--VAEGFDFANGINISP-DGKYVYI 237 (355)
T ss_dssp CTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTTCCEE--EEEEESSEEEEEECT-TSSEEEE
T ss_pred cCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECCeEEE--eecCCcccCcceECC-CCCEEEE
Confidence 32 4589999999999877643 1 3455555432111 111112345677777 4654 45
Q ss_pred eccCCCeEEEEECC
Q 024372 245 AGGEDMWVHVFDFH 258 (268)
Q Consensus 245 ~gs~d~~i~~wd~~ 258 (268)
+-+..+.|+.|++.
T Consensus 238 adt~~~~I~~~~~~ 251 (355)
T 3sre_A 238 AELLAHKIHVYEKH 251 (355)
T ss_dssp EEGGGTEEEEEEEC
T ss_pred EeCCCCeEEEEEEC
Confidence 55678899999985
No 314
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=95.60 E-value=0.8 Score=37.91 Aligned_cols=98 Identities=18% Similarity=0.161 Sum_probs=57.5
Q ss_pred CeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCe--EEEee---CccCcEEEEEecCC----CcEEEEeeCC-----C
Q 024372 18 PVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDW--IGTFE---GHKGAVWSCCLDAN----ALFSASGSAD-----F 83 (268)
Q Consensus 18 ~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~--~~~~~---~h~~~V~~~~~~~~----~~~l~s~s~D-----~ 83 (268)
.-.+++|.| ||.+++ +..++.|.+++ +++. +..+. .-......++++|+ +.+.++-... .
T Consensus 32 ~P~~ia~~p---dG~l~V-~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~ 105 (352)
T 2ism_A 32 VPWALAFLP---DGGMLI-AERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRN 105 (352)
T ss_dssp CEEEEEECT---TSCEEE-EETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEE
T ss_pred CceEEEEcC---CCeEEE-EeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCcc
Confidence 445888974 888555 56678888887 4432 22222 12346788999998 4444443322 5
Q ss_pred cEEEEeCCCCCe-----e-eeecc----CCeEEEEEECCCCCEEEEee
Q 024372 84 TAKLWDALTGDE-----K-HSFEH----KHIVRACAFSEDTHLLLTGG 121 (268)
Q Consensus 84 ~v~iw~~~~~~~-----~-~~~~~----~~~v~~v~~~~~~~~l~s~~ 121 (268)
.|..++...... + ..+.. .+....+.|.|++.+.++.+
T Consensus 106 ~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 106 QVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred EEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 677777654321 1 11221 12346789999998777643
No 315
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=95.48 E-value=0.75 Score=36.75 Aligned_cols=145 Identities=17% Similarity=0.204 Sum_probs=72.3
Q ss_pred CCCEEEEeeCC-----CeEEEEECCCCCC-CCeEec---CCcccEEEEEEeCCCCcEEEEeeCC-----CeEEEEeCCCC
Q 024372 113 DTHLLLTGGFE-----KILRIFDLNRPDA-PPREVG---NSSGSIRTVAWLHSDQTILSSCTDS-----GGVRLWDARSG 178 (268)
Q Consensus 113 ~~~~l~s~~~d-----~~i~~~d~~~~~~-~~~~~~---~~~~~v~~~~~~~~~~~~~~~~~~d-----~~i~iwd~~~~ 178 (268)
++++++.|+.+ ..+..||+.+... ...... .....-..+. . ++ .+++.|+.+ +.+.++|+.+.
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~-~-~~-~lyv~GG~~~~~~~~~~~~~d~~~~ 138 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATT-L-GD-MIYVSGGFDGSRRHTSMERYDPNID 138 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEE-E-TT-EEEEECCBCSSCBCCEEEEEETTTT
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEE-E-CC-EEEEEcccCCCcccceEEEEcCCCC
Confidence 56777777755 4578889865430 012211 1111111222 2 33 444444322 36889999876
Q ss_pred ceE--EeecCCCCEEEEEECCCCcEEEE-eCC-----CeEEEEeCCCceeeeEEeCCCCce--eeEEcCCCCCEEEeccC
Q 024372 179 KIV--QTLETKSPVTSAEVSRDGRYITT-ADG-----SSVKFWDANHFGLVKGYNMPCNTE--SASLEPKLGNIFIAGGE 248 (268)
Q Consensus 179 ~~~--~~~~~~~~v~~~~~s~~g~~l~~-~~~-----~~v~~wd~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~gs~ 248 (268)
+-. ..+.....-.+++.. ++++++. +.+ ..+..||..+..-...-..+.... ..... ++++++.|+.
T Consensus 139 ~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~ 215 (301)
T 2vpj_A 139 QWSMLGDMQTAREGAGLVVA-SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVVGGF 215 (301)
T ss_dssp EEEEEEECSSCCBSCEEEEE-TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCB
T ss_pred eEEECCCCCCCcccceEEEE-CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEEeCC
Confidence 532 222221111122222 5555443 322 468899987654332222222211 22222 4788888876
Q ss_pred C-----CeEEEEECCCCcEE
Q 024372 249 D-----MWVHVFDFHTGEQI 263 (268)
Q Consensus 249 d-----~~i~~wd~~~g~~~ 263 (268)
+ ..+.+||.++++-.
T Consensus 216 ~~~~~~~~v~~yd~~~~~W~ 235 (301)
T 2vpj_A 216 DGTAHLSSVEAYNIRTDSWT 235 (301)
T ss_dssp CSSSBCCCEEEEETTTTEEE
T ss_pred CCCcccceEEEEeCCCCcEE
Confidence 4 45899998876543
No 316
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=95.33 E-value=0.86 Score=36.53 Aligned_cols=181 Identities=13% Similarity=0.074 Sum_probs=85.5
Q ss_pred cEEEEeeC--CCcEEEEeCCCCCeeee--eccCC-eEEEEEECCCCCEEEEeeCC----CeEEEEECCCCCCCCe-EecC
Q 024372 74 LFSASGSA--DFTAKLWDALTGDEKHS--FEHKH-IVRACAFSEDTHLLLTGGFE----KILRIFDLNRPDAPPR-EVGN 143 (268)
Q Consensus 74 ~~l~s~s~--D~~v~iw~~~~~~~~~~--~~~~~-~v~~v~~~~~~~~l~s~~~d----~~i~~~d~~~~~~~~~-~~~~ 143 (268)
.+++.|+. ...+.+||..++.=... ..... .-..+. .++++++.|+.+ ..+..||+.+.+.... ....
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~ 90 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVF--WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPT 90 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEE--ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSS
T ss_pred eEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEE--ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCc
Confidence 34455554 35677788766542211 11111 111122 256677777755 6677888765321100 0111
Q ss_pred CcccEEEEEEeCCCCcEEEEeeCC------CeEEEEeCCCCceEEe--ecCCCCEEEEEECCCCcEEE-EeC--------
Q 024372 144 SSGSIRTVAWLHSDQTILSSCTDS------GGVRLWDARSGKIVQT--LETKSPVTSAEVSRDGRYIT-TAD-------- 206 (268)
Q Consensus 144 ~~~~v~~~~~~~~~~~~~~~~~~d------~~i~iwd~~~~~~~~~--~~~~~~v~~~~~s~~g~~l~-~~~-------- 206 (268)
....-..+. . ++ .+++.|+.+ +.+.+||+.+.+-... +.....-.+++. -++++++ ++.
T Consensus 91 ~r~~~~~~~-~-~~-~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~ 166 (306)
T 3ii7_A 91 PRDSLAACA-A-EG-KIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE-ANGLIYVCGGSLGNNVSGR 166 (306)
T ss_dssp CCBSCEEEE-E-TT-EEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCEESCTTTCE
T ss_pred cccceeEEE-E-CC-EEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE-ECCEEEEECCCCCCCCccc
Confidence 111111222 2 33 444444432 4588999987753322 211111112222 2555544 331
Q ss_pred -CCeEEEEeCCCceeeeEEeCCCCc--eeeEEcCCCCCEEEeccCC-----CeEEEEECCCCcE
Q 024372 207 -GSSVKFWDANHFGLVKGYNMPCNT--ESASLEPKLGNIFIAGGED-----MWVHVFDFHTGEQ 262 (268)
Q Consensus 207 -~~~v~~wd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~gs~d-----~~i~~wd~~~g~~ 262 (268)
-..+.+||..+..-...-..+... -..... .+++++.||.+ ..+.+||..+++-
T Consensus 167 ~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W 228 (306)
T 3ii7_A 167 VLNSCEVYDPATETWTELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLNEW 228 (306)
T ss_dssp ECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTTTEE
T ss_pred ccceEEEeCCCCCeEEECCCccchhhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCCcE
Confidence 235888998765433222222221 122222 47888888754 3588999877653
No 317
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=95.13 E-value=0.086 Score=43.67 Aligned_cols=107 Identities=15% Similarity=0.193 Sum_probs=67.0
Q ss_pred EEEEeeCCCeEEEEeCCCCceEEeecCC--CCEEEEEE--CC-CCcEEEE--eCCCeEEEEeCCCceeeeEEeCCCCcee
Q 024372 160 ILSSCTDSGGVRLWDARSGKIVQTLETK--SPVTSAEV--SR-DGRYITT--ADGSSVKFWDANHFGLVKGYNMPCNTES 232 (268)
Q Consensus 160 ~~~~~~~d~~i~iwd~~~~~~~~~~~~~--~~v~~~~~--s~-~g~~l~~--~~~~~v~~wd~~~~~~~~~~~~~~~~~~ 232 (268)
++..++.||.|.-.|..+|+.+.+++.. .++....- .+ ++..++. ..|+.|..+|..++.....+..+.....
T Consensus 12 ~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~~ 91 (339)
T 2be1_A 12 ILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVST 91 (339)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHTT
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccceec
Confidence 3445567799999999999998887654 23222110 01 3344433 4688999999877644433433321110
Q ss_pred --eEEc-------C---CCCCEEEeccCCCeEEEEECCCCcEEeec
Q 024372 233 --ASLE-------P---KLGNIFIAGGEDMWVHVFDFHTGEQIAIT 266 (268)
Q Consensus 233 --~~~~-------~---~~~~~~~~gs~d~~i~~wd~~~g~~~~~~ 266 (268)
+... + ..+..+++|+.++.++..|.++|+++-.+
T Consensus 92 SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~ 137 (339)
T 2be1_A 92 SPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAF 137 (339)
T ss_dssp CSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEE
T ss_pred cccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEE
Confidence 1100 0 03667889999999999999999998765
No 318
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=95.10 E-value=1 Score=36.03 Aligned_cols=143 Identities=16% Similarity=0.225 Sum_probs=69.4
Q ss_pred CCCEEEEeeCC-----CeEEEEECCCCCCCCeEec---CCcccEEEEEEeCCCCcEEEEeeCC----CeEEEEeCCCCce
Q 024372 113 DTHLLLTGGFE-----KILRIFDLNRPDAPPREVG---NSSGSIRTVAWLHSDQTILSSCTDS----GGVRLWDARSGKI 180 (268)
Q Consensus 113 ~~~~l~s~~~d-----~~i~~~d~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~~~~~~d----~~i~iwd~~~~~~ 180 (268)
++++++.|+.+ ..+..||+.+.+. .... .....-..+. . ++..++.+|.+. +.+.+||+.+.+-
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W--~~~~~~p~~r~~~~~~~-~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~W 136 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQW--TSVANMRDRRSTLGAAV-L-NGLLYAVGGFDGSTGLSSVEAYNIKSNEW 136 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEE--EEECCCSSCCBSCEEEE-E-TTEEEEEEEECSSCEEEEEEEEETTTTEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCce--eeCCCCCccccceEEEE-E-CCEEEEEcCCCCCccCceEEEEeCCCCeE
Confidence 56777777754 3477888764321 1111 1111111222 2 343344444332 2578899887653
Q ss_pred EEe--ecCCCCEEEEEECCCCcEEE-EeC-------CCeEEEEeCCCceeeeEEeCCCCc--eeeEEcCCCCCEEEeccC
Q 024372 181 VQT--LETKSPVTSAEVSRDGRYIT-TAD-------GSSVKFWDANHFGLVKGYNMPCNT--ESASLEPKLGNIFIAGGE 248 (268)
Q Consensus 181 ~~~--~~~~~~v~~~~~s~~g~~l~-~~~-------~~~v~~wd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~gs~ 248 (268)
... +.....-.+++.. ++++++ ++. -..+..||..+..-...-..+... ...... ++++++.||.
T Consensus 137 ~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~ 213 (302)
T 2xn4_A 137 FHVAPMNTRRSSVGVGVV-GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGH 213 (302)
T ss_dssp EEECCCSSCCBSCEEEEE-TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCB
T ss_pred eecCCCCCcccCceEEEE-CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEECCC
Confidence 322 2211111122222 455544 332 135888998765433222222221 122222 4788888876
Q ss_pred C-----CeEEEEECCCCcE
Q 024372 249 D-----MWVHVFDFHTGEQ 262 (268)
Q Consensus 249 d-----~~i~~wd~~~g~~ 262 (268)
+ ..+.+||..+++-
T Consensus 214 ~~~~~~~~~~~yd~~~~~W 232 (302)
T 2xn4_A 214 DGPLVRKSVEVYDPTTNAW 232 (302)
T ss_dssp SSSSBCCCEEEEETTTTEE
T ss_pred CCCcccceEEEEeCCCCCE
Confidence 4 3588999877653
No 319
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=95.02 E-value=1.3 Score=36.75 Aligned_cols=140 Identities=14% Similarity=0.105 Sum_probs=75.4
Q ss_pred EEEEEECCCCC-EEEEeeCCCeEEEEECCCCCC-CCeE----ecCCcccEEEEEEeCC---CCcEEEEeeC-------CC
Q 024372 105 VRACAFSEDTH-LLLTGGFEKILRIFDLNRPDA-PPRE----VGNSSGSIRTVAWLHS---DQTILSSCTD-------SG 168 (268)
Q Consensus 105 v~~v~~~~~~~-~l~s~~~d~~i~~~d~~~~~~-~~~~----~~~~~~~v~~~~~~~~---~~~~~~~~~~-------d~ 168 (268)
...++|.|+++ ++++ ...+.|++++...... .... .....+....+++.|+ ++.+.++-+. ..
T Consensus 20 P~~i~~~pdG~~l~V~-e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~ 98 (353)
T 2g8s_A 20 PWALAFLPDNHGMLIT-LRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGT 98 (353)
T ss_dssp EEEEEECSTTCCEEEE-ETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEE
T ss_pred cEEEEEcCCCCEEEEE-eCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCcee
Confidence 46788999998 6654 5678999988532110 0110 1112335678898885 5566555332 23
Q ss_pred eEEEEeCCCC--c--eEE----eecC----CCCEEEEEECCCCcEEEEeCC--------------CeEEEEeCCCc----
Q 024372 169 GVRLWDARSG--K--IVQ----TLET----KSPVTSAEVSRDGRYITTADG--------------SSVKFWDANHF---- 218 (268)
Q Consensus 169 ~i~iwd~~~~--~--~~~----~~~~----~~~v~~~~~s~~g~~l~~~~~--------------~~v~~wd~~~~---- 218 (268)
.|..|++... + ..+ .+.. ......++|.|||.+.++..+ +.|.-.|....
T Consensus 99 ~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~ 178 (353)
T 2g8s_A 99 AVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDD 178 (353)
T ss_dssp EEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCTT
T ss_pred EEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCCC
Confidence 5666666432 1 111 1221 122467999999977665422 24555555321
Q ss_pred --------eeeeEEeC-CCCceeeEEcCCCCCEEEe
Q 024372 219 --------GLVKGYNM-PCNTESASLEPKLGNIFIA 245 (268)
Q Consensus 219 --------~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 245 (268)
.....+.. ..++..+++.+..|+++++
T Consensus 179 npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~ 214 (353)
T 2g8s_A 179 NPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLN 214 (353)
T ss_dssp CTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEE
T ss_pred CCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEE
Confidence 01222322 2345677777756777765
No 320
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=94.98 E-value=1.3 Score=40.35 Aligned_cols=191 Identities=8% Similarity=-0.015 Sum_probs=92.7
Q ss_pred CCcEEEEEeCC----CCeEEeeCCCCCeEEEe-e-----CccCc-EEEEEecC-CCcEEEEeeCCC------cEEEEeCC
Q 024372 30 DGFFLVSASKD----SSPMLRNGETGDWIGTF-E-----GHKGA-VWSCCLDA-NALFSASGSADF------TAKLWDAL 91 (268)
Q Consensus 30 dg~~l~s~s~d----~~i~iw~~~~~~~~~~~-~-----~h~~~-V~~~~~~~-~~~~l~s~s~D~------~v~iw~~~ 91 (268)
++.+++.|+.+ ..+.++|..++++...- . ..... -.+++..+ ++.+++.||.++ .+.+||..
T Consensus 397 ~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~ 476 (695)
T 2zwa_A 397 GNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMK 476 (695)
T ss_dssp SSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETT
T ss_pred CCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCC
Confidence 55677777654 35667888888765432 1 11111 11222232 677777777543 46677776
Q ss_pred CCCeeee--eccCCeEEEEEECCCCCEEEEeeCCC--eEEEEECCCCCCCCeE----ecCCcccEEEEEEeCCCCcEEEE
Q 024372 92 TGDEKHS--FEHKHIVRACAFSEDTHLLLTGGFEK--ILRIFDLNRPDAPPRE----VGNSSGSIRTVAWLHSDQTILSS 163 (268)
Q Consensus 92 ~~~~~~~--~~~~~~v~~v~~~~~~~~l~s~~~d~--~i~~~d~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~~~~~ 163 (268)
++.=... ...+..-.+++.-.++++++.|+.++ .+.+||+.+....... .......-.++.+....+.+++.
T Consensus 477 t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~ 556 (695)
T 2zwa_A 477 TREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIIL 556 (695)
T ss_dssp TTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEE
T ss_pred CCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEE
Confidence 6432111 11111112233323788888888655 5788887653211000 00111111223444442445444
Q ss_pred eeC-------CCeEEEEeCCCCce-----EEee---cCCCC-EEEEEECCCCcEEE-EeC--------CCeEEEEeCCCc
Q 024372 164 CTD-------SGGVRLWDARSGKI-----VQTL---ETKSP-VTSAEVSRDGRYIT-TAD--------GSSVKFWDANHF 218 (268)
Q Consensus 164 ~~~-------d~~i~iwd~~~~~~-----~~~~---~~~~~-v~~~~~s~~g~~l~-~~~--------~~~v~~wd~~~~ 218 (268)
|+. -+.+.+||+.+.+- ...+ ..... -.++....++++++ +|. ...|.+||+.+.
T Consensus 557 GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~ 636 (695)
T 2zwa_A 557 GGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSE 636 (695)
T ss_dssp CCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTT
T ss_pred CCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCC
Confidence 433 14688999988761 1111 11111 11333334355544 442 245889998765
Q ss_pred ee
Q 024372 219 GL 220 (268)
Q Consensus 219 ~~ 220 (268)
.-
T Consensus 637 ~W 638 (695)
T 2zwa_A 637 TL 638 (695)
T ss_dssp EE
T ss_pred eE
Confidence 43
No 321
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=94.88 E-value=0.84 Score=38.95 Aligned_cols=103 Identities=12% Similarity=0.206 Sum_probs=69.1
Q ss_pred CCCCcEEEEeeCCCeEEEEeCCCCceEEeecCC-----CCEEEEEECCCCcEEEEeCCCeEEEEeCC-Cc---------e
Q 024372 155 HSDQTILSSCTDSGGVRLWDARSGKIVQTLETK-----SPVTSAEVSRDGRYITTADGSSVKFWDAN-HF---------G 219 (268)
Q Consensus 155 ~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~-----~~v~~~~~s~~g~~l~~~~~~~v~~wd~~-~~---------~ 219 (268)
.++..++++ . ++.||.-++..+...+.+... ..+..+.++|+|++|+..++..|.+-.+- .. .
T Consensus 30 ~n~t~i~~a-~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~ 107 (452)
T 3pbp_A 30 QNGTRIVFI-Q-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQD 107 (452)
T ss_dssp TTTTEEEEE-E-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHH
T ss_pred cCCCEEEEE-E-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCCeEEEEEecCccccCccccccc
Confidence 444444433 3 388998888754444444322 25778999999999998888899988874 11 0
Q ss_pred --eeeEEeCC-------CCceeeEEcCC--CCCEEEeccCCCeEEEEECCC
Q 024372 220 --LVKGYNMP-------CNTESASLEPK--LGNIFIAGGEDMWVHVFDFHT 259 (268)
Q Consensus 220 --~~~~~~~~-------~~~~~~~~~~~--~~~~~~~gs~d~~i~~wd~~~ 259 (268)
..+.|+.. ..+..+.|+|- .+..|++=..|+.||+||+..
T Consensus 108 ~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~ 158 (452)
T 3pbp_A 108 AFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILN 158 (452)
T ss_dssp TTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTC
T ss_pred ccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEccc
Confidence 12345542 23556667764 356899999999999999975
No 322
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=94.56 E-value=1.6 Score=36.10 Aligned_cols=140 Identities=9% Similarity=-0.028 Sum_probs=76.4
Q ss_pred eEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEe---cCCcccEEEEEEeCC---CCcEEEEeeC---C----CeE
Q 024372 104 IVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREV---GNSSGSIRTVAWLHS---DQTILSSCTD---S----GGV 170 (268)
Q Consensus 104 ~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~---~~~~~~v~~~~~~~~---~~~~~~~~~~---d----~~i 170 (268)
....++|.|+++++++ ..++.|+++|. .+....... .........+++.|+ ++.++++-+. + +.|
T Consensus 30 ~P~~ia~~pdG~l~V~-e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v 107 (354)
T 3a9g_A 30 VPWSIAPLGGGRYLVT-ERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRV 107 (354)
T ss_dssp CEEEEEEEETTEEEEE-ETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEE
T ss_pred CCeEEEEcCCCeEEEE-eCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEE
Confidence 3467889999975554 55688988873 222011110 112245678898886 5666655442 2 567
Q ss_pred EEEeCCCC-------ceE-EeecC--CCCEEEEEECCCCcEEEEeCC--------------CeEEEEeCCCce-------
Q 024372 171 RLWDARSG-------KIV-QTLET--KSPVTSAEVSRDGRYITTADG--------------SSVKFWDANHFG------- 219 (268)
Q Consensus 171 ~iwd~~~~-------~~~-~~~~~--~~~v~~~~~s~~g~~l~~~~~--------------~~v~~wd~~~~~------- 219 (268)
..|+.... +.+ ..+.. ......++|.|||++.++..+ +.|.-.|....-
T Consensus 108 ~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~ 187 (354)
T 3a9g_A 108 IRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFP 187 (354)
T ss_dssp EEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSST
T ss_pred EEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCC
Confidence 77776543 111 22321 123567999999987765321 244444443210
Q ss_pred eeeEEeC-CCCceeeEEcCCCCCEEEe
Q 024372 220 LVKGYNM-PCNTESASLEPKLGNIFIA 245 (268)
Q Consensus 220 ~~~~~~~-~~~~~~~~~~~~~~~~~~~ 245 (268)
....+.. ..++..+++.+..++++++
T Consensus 188 ~~~i~a~G~rnp~Gla~d~~~g~l~v~ 214 (354)
T 3a9g_A 188 NSPIWSYGHRNPQGIDWHRASGVMVAT 214 (354)
T ss_dssp TCCEEEECCSCCCEEEECTTTCCEEEE
T ss_pred CCcEEEEccCCcceEEEeCCCCCEEEE
Confidence 0112221 2345677788756787776
No 323
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=94.10 E-value=1.6 Score=33.82 Aligned_cols=136 Identities=9% Similarity=-0.042 Sum_probs=72.7
Q ss_pred cEEEEEecCCCcEEEEeeCCCcEEEEeCCCCCeeeeeccCCeE--------EEEEECCCCCEEEEeeCCCeEEEEECCCC
Q 024372 63 AVWSCCLDANALFSASGSADFTAKLWDALTGDEKHSFEHKHIV--------RACAFSEDTHLLLTGGFEKILRIFDLNRP 134 (268)
Q Consensus 63 ~V~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~v--------~~v~~~~~~~~l~s~~~d~~i~~~d~~~~ 134 (268)
.+..++|+|++.+.+. .++.++--+..+.....-+.....| ..+-|.|++.+.++ .|+.|.-++..+.
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~ 117 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQS 117 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCS
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcC
Confidence 5678999999886554 5666555554332221111112223 67889999987766 5699888875322
Q ss_pred CCC-----CeEecC-CcccEEEEEEeCCCCcEEEEeeCCCeEEEEeCCCCceE------Eeec-C-CCCEEEEEECCCCc
Q 024372 135 DAP-----PREVGN-SSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIV------QTLE-T-KSPVTSAEVSRDGR 200 (268)
Q Consensus 135 ~~~-----~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~------~~~~-~-~~~v~~~~~s~~g~ 200 (268)
... ...++. -=..+..|.+.|++ .+.+.. |+.+.-+-..++... ..+. . -....-+.|+|+|.
T Consensus 118 ~~~~Wl~~a~~vg~~gw~~~~~lff~p~G-~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~ 194 (236)
T 1tl2_A 118 DTDNWIARATEVGSGGWSGFKFLFFHPNG-YLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGT 194 (236)
T ss_dssp TTCCHHHHSEEEECSSGGGEEEEEECTTS-CEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSC
T ss_pred CCCceeccccEeccCCCCceEEEEECCCc-eEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCc
Confidence 111 011111 11356777777765 455444 466544433322211 1111 1 11234466888888
Q ss_pred EEEEe
Q 024372 201 YITTA 205 (268)
Q Consensus 201 ~l~~~ 205 (268)
+.+..
T Consensus 195 l~~v~ 199 (236)
T 1tl2_A 195 LFGVQ 199 (236)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 77666
No 324
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=93.48 E-value=2.4 Score=33.95 Aligned_cols=182 Identities=14% Similarity=0.187 Sum_probs=84.5
Q ss_pred CCcEEEEEeC----C-----CCeEEeeCCCCCeEEEeeCcc--CcEEEEEecCCCcEEEEeeCC-----CcEEEEeCCCC
Q 024372 30 DGFFLVSASK----D-----SSPMLRNGETGDWIGTFEGHK--GAVWSCCLDANALFSASGSAD-----FTAKLWDALTG 93 (268)
Q Consensus 30 dg~~l~s~s~----d-----~~i~iw~~~~~~~~~~~~~h~--~~V~~~~~~~~~~~l~s~s~D-----~~v~iw~~~~~ 93 (268)
++.+++.|+. + ..+.++|..+.++...-.-.. ..-..+.+ ++.+++.|+.+ ..+.++|..+.
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~ 147 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERD 147 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTT
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCC
Confidence 4556666665 2 356778888876543211111 11111222 56666666644 35777887665
Q ss_pred Ceeee--eccCCe-EEEEEECCCCCEEEEeeCC-----CeEEEEECCCCCCCC-eEecCCcccEEEEEEeCCCCcEEEEe
Q 024372 94 DEKHS--FEHKHI-VRACAFSEDTHLLLTGGFE-----KILRIFDLNRPDAPP-REVGNSSGSIRTVAWLHSDQTILSSC 164 (268)
Q Consensus 94 ~~~~~--~~~~~~-v~~v~~~~~~~~l~s~~~d-----~~i~~~d~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~ 164 (268)
.=... ...... -..+.+ ++++++.|+.+ ..+..||+.+..-.. .........-..+. . ++ .+++.|
T Consensus 148 ~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~-~~-~iyv~G 222 (308)
T 1zgk_A 148 EWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCV-L-HN-CIYAAG 222 (308)
T ss_dssp EEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-E-TT-EEEEEC
T ss_pred eEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEE-E-CC-EEEEEe
Confidence 42221 111111 112222 56777777754 457788876432110 00111111112222 2 33 444444
Q ss_pred eCC-----CeEEEEeCCCCceEEe--ecCCCCEEEEEECCCCcEEE-EeCC-----CeEEEEeCCCce
Q 024372 165 TDS-----GGVRLWDARSGKIVQT--LETKSPVTSAEVSRDGRYIT-TADG-----SSVKFWDANHFG 219 (268)
Q Consensus 165 ~~d-----~~i~iwd~~~~~~~~~--~~~~~~v~~~~~s~~g~~l~-~~~~-----~~v~~wd~~~~~ 219 (268)
+.+ +.+.+||+.+.+=... +.....-.+++.. ++++++ ++.+ ..+.+||+++.+
T Consensus 223 G~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 223 GYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVH-QGRIYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp CBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEEE-CCEEEEEcCcCCCcccceEEEEcCCCCE
Confidence 332 4689999987653322 1111111122222 455544 4422 357788886643
No 325
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=93.25 E-value=2.7 Score=33.78 Aligned_cols=177 Identities=12% Similarity=0.077 Sum_probs=83.5
Q ss_pred EEEeeCCCcEEEEeCCCCCeee-eeccC-CeEEEEEECCCCCEEEEeeC-----C------CeEEEEECCCCCCCCeEec
Q 024372 76 SASGSADFTAKLWDALTGDEKH-SFEHK-HIVRACAFSEDTHLLLTGGF-----E------KILRIFDLNRPDAPPREVG 142 (268)
Q Consensus 76 l~s~s~D~~v~iw~~~~~~~~~-~~~~~-~~v~~v~~~~~~~~l~s~~~-----d------~~i~~~d~~~~~~~~~~~~ 142 (268)
++.|+ ..+.+||..++.=.. ..+.+ ..........++++++.|+. . ..+..||+.+.+- ....
T Consensus 8 ~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W--~~~~ 83 (315)
T 4asc_A 8 FMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEW--LGMP 83 (315)
T ss_dssp EEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEE--EECC
T ss_pred EEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeE--EECC
Confidence 34454 467888887765322 11111 11222233457788888873 1 1256778754321 1111
Q ss_pred ---CCcccEEEEEEeCCCCcEEEEeeC--------CCeEEEEeCCCCceEEe--ecCCCCEEEEEECCCCcEE-EEeC-C
Q 024372 143 ---NSSGSIRTVAWLHSDQTILSSCTD--------SGGVRLWDARSGKIVQT--LETKSPVTSAEVSRDGRYI-TTAD-G 207 (268)
Q Consensus 143 ---~~~~~v~~~~~~~~~~~~~~~~~~--------d~~i~iwd~~~~~~~~~--~~~~~~v~~~~~s~~g~~l-~~~~-~ 207 (268)
.....- +++.. ++ .+++.|+. -+.+.++|+.+.+=... +.....-.+++. -+++++ +++. +
T Consensus 84 ~~p~~r~~~-~~~~~-~~-~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~ 159 (315)
T 4asc_A 84 PLPSPRCLF-GLGEA-LN-SIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS-HMDLVYVIGGKGS 159 (315)
T ss_dssp CBSSCEESC-EEEEE-TT-EEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBCT
T ss_pred CCCcchhce-eEEEE-CC-EEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE-ECCEEEEEeCCCC
Confidence 111111 11222 33 44444432 14588999987653221 111111112223 344544 4443 1
Q ss_pred -----CeEEEEeCCCceeeeEEeCCCCc--eeeEEcCCCCCEEEeccCCC-----eEEEEECCCCcE
Q 024372 208 -----SSVKFWDANHFGLVKGYNMPCNT--ESASLEPKLGNIFIAGGEDM-----WVHVFDFHTGEQ 262 (268)
Q Consensus 208 -----~~v~~wd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~gs~d~-----~i~~wd~~~g~~ 262 (268)
..+.+||..+..-...-..+... -..... ++++++.||.++ .+.+||..+++-
T Consensus 160 ~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 224 (315)
T 4asc_A 160 DRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNKW 224 (315)
T ss_dssp TSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTEE
T ss_pred CCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCeE
Confidence 36889998765332222222221 122222 478888887643 588999877653
No 326
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=92.75 E-value=2.7 Score=32.50 Aligned_cols=103 Identities=14% Similarity=0.016 Sum_probs=60.2
Q ss_pred CCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCe---E---EEee--CccCcEEEEEecCCCcEEEEeeCCCcEEEE
Q 024372 17 RPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDW---I---GTFE--GHKGAVWSCCLDANALFSASGSADFTAKLW 88 (268)
Q Consensus 17 ~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~---~---~~~~--~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw 88 (268)
..+..++|+| +|.+-+. .++.+.--+..+.+. . ..+. +-.. -.++.|.+++.+.++ .|+.|+-+
T Consensus 41 ~~~~~laf~P---~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~-F~a~~fD~~G~LYav--~dG~iyr~ 112 (236)
T 1tl2_A 41 SNFKFLFLSP---GGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQ-FQFLFFDPNGYLYAV--SKDKLYKA 112 (236)
T ss_dssp TTCSEEEECT---TSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGG-CSEEEECTTSCEEEE--ETTEEEEE
T ss_pred ccceeEEECC---CccEEEE--eCCeEEEECCCCCCcccccccccEeccccccc-ceEEEECCCCCEEEe--CCCEEEEe
Confidence 4677999996 7875554 666654444433211 1 1111 1111 367789999987666 57999888
Q ss_pred eCCCCCeee------eecc--CCeEEEEEECCCCCEEEEeeCCCeEEEE
Q 024372 89 DALTGDEKH------SFEH--KHIVRACAFSEDTHLLLTGGFEKILRIF 129 (268)
Q Consensus 89 ~~~~~~~~~------~~~~--~~~v~~v~~~~~~~~l~s~~~d~~i~~~ 129 (268)
+.-+..... .+.. =..+..|.|.|+|.+.+.. |+.+...
T Consensus 113 ~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~ 159 (236)
T 1tl2_A 113 SPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKA 159 (236)
T ss_dssp SCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEE
T ss_pred CCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEec
Confidence 763322211 1101 0356889999999877665 7775443
No 327
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=92.66 E-value=7.9 Score=37.62 Aligned_cols=202 Identities=14% Similarity=0.090 Sum_probs=101.0
Q ss_pred EEEEEeCCCCeEEeeCCCCCeEEEee-CccCcEEEEEecCC------CcEEEEeeC-CCcEEEEeCCCCCeeeeecc--C
Q 024372 33 FLVSASKDSSPMLRNGETGDWIGTFE-GHKGAVWSCCLDAN------ALFSASGSA-DFTAKLWDALTGDEKHSFEH--K 102 (268)
Q Consensus 33 ~l~s~s~d~~i~iw~~~~~~~~~~~~-~h~~~V~~~~~~~~------~~~l~s~s~-D~~v~iw~~~~~~~~~~~~~--~ 102 (268)
+++.++ ++.+.++....+++...-+ .-.+.|.++++.+. +.+++.|.+ |++++|+.+.+.+.+..... .
T Consensus 525 ~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~ 603 (1158)
T 3ei3_A 525 QVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGE 603 (1158)
T ss_dssp EEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSS
T ss_pred EEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCC
Confidence 455554 5667666665554322111 12457899998753 468888887 99999999987665544332 1
Q ss_pred CeEEEEEEC--CCCCEEEEeeCCCeEEEEECCC--CCCCCe--EecCCcccEEEEEEeCCCCcEEEEeeCCCeEEEEeCC
Q 024372 103 HIVRACAFS--EDTHLLLTGGFEKILRIFDLNR--PDAPPR--EVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDAR 176 (268)
Q Consensus 103 ~~v~~v~~~--~~~~~l~s~~~d~~i~~~d~~~--~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~iwd~~ 176 (268)
....++.+. ....+|..|-.||.+..+.+.. +...-. ...+ ..++.-..+...+..-+.++++ +-..++-.+
T Consensus 604 ~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l~d~r~~~LG-~~pv~L~~~~~~~~~~V~a~s~-rp~liy~~~ 681 (1158)
T 3ei3_A 604 IIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVTLG-TQPTVLRTFRSLSTTNVFACSD-RPTVIYSSN 681 (1158)
T ss_dssp CCEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCEEEEEEEECC-SSCCEEEEEESSSCEEEEEESS-SCEEEEESS
T ss_pred CCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCCccccceeEEcC-CCceEEEEEeeCCceeEEEECC-CCEEEEEcC
Confidence 233333322 2335677888999876665532 211101 1111 1233333332233332333333 555555443
Q ss_pred CCce-EEeecCCCCEEEEEECCCC--cEEEEeCCCeEEEEeCCCce--eeeEEeCCCCceeeEEcCC
Q 024372 177 SGKI-VQTLETKSPVTSAEVSRDG--RYITTADGSSVKFWDANHFG--LVKGYNMPCNTESASLEPK 238 (268)
Q Consensus 177 ~~~~-~~~~~~~~~v~~~~~s~~g--~~l~~~~~~~v~~wd~~~~~--~~~~~~~~~~~~~~~~~~~ 238 (268)
++. +..+....--....|+... .-++..+++.++|..+.+.. .+++++....+..++.++.
T Consensus 682 -~~l~~s~l~~~~v~~~~~F~se~~~~g~v~~~~~~LrI~~i~~~~~~~~~~ipL~~Tprri~y~~~ 747 (1158)
T 3ei3_A 682 -HKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEV 747 (1158)
T ss_dssp -SSEEEEEBSSSCCCEEEEECCSSSTTEEEEECSSCEEEEEECCSSSEEEEEEECSSEEEEEEEEGG
T ss_pred -CceEEeccChHHhceEeccCcccCCCcEEEEcCCceEEEEecccCCeeEEEEeCCCCceEEEEcCC
Confidence 332 2222222112233454321 22334445568887765432 2444555555566666664
No 328
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=92.08 E-value=1.9 Score=38.23 Aligned_cols=99 Identities=11% Similarity=0.170 Sum_probs=64.1
Q ss_pred EEEEEECCCCCEEEEe-eCCCeEEEEECCC------CCC-C-----CeEecCCcccEEEEEEeCCCCcEEEEeeCCCeEE
Q 024372 105 VRACAFSEDTHLLLTG-GFEKILRIFDLNR------PDA-P-----PREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVR 171 (268)
Q Consensus 105 v~~v~~~~~~~~l~s~-~~d~~i~~~d~~~------~~~-~-----~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~ 171 (268)
...+..+|||+.++.+ --+.++.++|.+. .+. . ..+..--. .-...+|.+++ +..++..-|.+|-
T Consensus 325 PHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~Gl-GPlHt~Fd~~G-~aYTtlfidSqvv 402 (638)
T 3sbq_A 325 PHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGL-GPLHTTFDGRG-NAYTTLFIDSQVV 402 (638)
T ss_dssp CCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCS-CEEEEEECSSS-EEEEEETTTTEEE
T ss_pred CcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCC-cccEEEECCCC-ceEeeeeecceEE
Confidence 4467789999977765 4778899999762 111 0 01111112 23456777766 7778888889999
Q ss_pred EEeCCCC----------ceEEeecCCCCEEEEEE------CCCCcEEEEe
Q 024372 172 LWDARSG----------KIVQTLETKSPVTSAEV------SRDGRYITTA 205 (268)
Q Consensus 172 iwd~~~~----------~~~~~~~~~~~v~~~~~------s~~g~~l~~~ 205 (268)
-|++.+. ..+..+..+..+--+.. .|+|++|++.
T Consensus 403 kWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~l 452 (638)
T 3sbq_A 403 KWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVAL 452 (638)
T ss_dssp EEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEE
T ss_pred EEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEe
Confidence 9999753 35566666555555544 5788888764
No 329
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=91.59 E-value=2.5 Score=34.59 Aligned_cols=92 Identities=11% Similarity=0.101 Sum_probs=42.4
Q ss_pred CeEEEEeCCCCce--EEeecCCCCE-EEEEECCCCcE-EEEeC------CCeEEEEeC--CCc--eeeeEEeCCCCcee-
Q 024372 168 GGVRLWDARSGKI--VQTLETKSPV-TSAEVSRDGRY-ITTAD------GSSVKFWDA--NHF--GLVKGYNMPCNTES- 232 (268)
Q Consensus 168 ~~i~iwd~~~~~~--~~~~~~~~~v-~~~~~s~~g~~-l~~~~------~~~v~~wd~--~~~--~~~~~~~~~~~~~~- 232 (268)
+.+.+||+.+.+= +..+...... .+++.. ++++ ++++. ...+..+|+ .+. ..+.....+.....
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~ 246 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGG 246 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSC
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccc
Confidence 5789999987653 2233221111 233333 4444 44432 235667776 332 22222222211111
Q ss_pred eEEcCCCCCEEEeccCC----------------------CeEEEEECCCCc
Q 024372 233 ASLEPKLGNIFIAGGED----------------------MWVHVFDFHTGE 261 (268)
Q Consensus 233 ~~~~~~~~~~~~~gs~d----------------------~~i~~wd~~~g~ 261 (268)
.+... ++++++.||.+ ..+.+||..+++
T Consensus 247 ~~~~~-~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~ 296 (357)
T 2uvk_A 247 FAGIS-NDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGK 296 (357)
T ss_dssp EEEEE-TTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---
T ss_pred eEEEE-CCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCc
Confidence 12222 47888888742 247889987654
No 330
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=91.12 E-value=5.7 Score=32.77 Aligned_cols=191 Identities=9% Similarity=0.094 Sum_probs=109.7
Q ss_pred CCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcE-EEEeeCCCcEEEEeCCC-CCeeeeec-c----C
Q 024372 30 DGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALF-SASGSADFTAKLWDALT-GDEKHSFE-H----K 102 (268)
Q Consensus 30 dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~-l~s~s~D~~v~iw~~~~-~~~~~~~~-~----~ 102 (268)
..+.+|--. ..+++|+|+++.+.++.+.-. ..|..=.|-....+ |+| +..|+-|++.. ..+...+. | .
T Consensus 77 ~~~ViALra-g~~LQiFnletK~klks~~~~-e~VvfWkWis~~~L~lVT---~taVyHWs~~~~s~P~kvFdR~~~L~~ 151 (365)
T 2xzh_A 77 ASKVIALKA-GKTLQIFNIEMKSKMKAHTMT-DDVTFWKWISLNTVALVT---DNAVYHWSMEGESQPVKMFDRHSSLAG 151 (365)
T ss_dssp SSSEEEEEE-TTEEEEEETTTTEEEEEEECS-SCEEEEEECSSSEEEEEE---SSEEEEEESSTTCCCEEEEECCGGGTT
T ss_pred CccEEEEec-CCeEEEechHHhhhhcceecC-CccEEEEecCCCeEEEEc---CCcEEEEcccCCCCCceeeecchhccc
Confidence 445565554 678999999999877776654 45555566544443 344 56899999864 33444443 2 2
Q ss_pred CeEEEEEECCCCCEEEEee-------CCCeEEEEECCCCCCCCeEecCCcccEEEEEEe--CCCCcEEEEeeC---CCeE
Q 024372 103 HIVRACAFSEDTHLLLTGG-------FEKILRIFDLNRPDAPPREVGNSSGSIRTVAWL--HSDQTILSSCTD---SGGV 170 (268)
Q Consensus 103 ~~v~~v~~~~~~~~l~s~~-------~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~~~~~~---d~~i 170 (268)
..|.....+++.++++..+ -.|.+.+|..+. ...+.+.+|.+....+... +....++.-+.. .+.+
T Consensus 152 ~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er--~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kL 229 (365)
T 2xzh_A 152 CQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR--KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKL 229 (365)
T ss_dssp CEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTT--TEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEE
T ss_pred ceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecc--cccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEE
Confidence 3566677788888877543 226678998753 3345555664433222211 111123322221 1478
Q ss_pred EEEeCCCC---c------eEEe-ecC---CCCEEEEEECCCCcEE-EEeCCCeEEEEeCCCceeeeEEeCC
Q 024372 171 RLWDARSG---K------IVQT-LET---KSPVTSAEVSRDGRYI-TTADGSSVKFWDANHFGLVKGYNMP 227 (268)
Q Consensus 171 ~iwd~~~~---~------~~~~-~~~---~~~v~~~~~s~~g~~l-~~~~~~~v~~wd~~~~~~~~~~~~~ 227 (268)
.|-++... . .+.. +.. ....-++.+++--.++ +..--|.|.++|++++.++..-...
T Consensus 230 hIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS 300 (365)
T 2xzh_A 230 HIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRIS 300 (365)
T ss_dssp EEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred EEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccC
Confidence 88887432 1 1111 111 1224566777654444 4455689999999999887655544
No 331
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=90.53 E-value=6.5 Score=32.47 Aligned_cols=147 Identities=12% Similarity=0.063 Sum_probs=80.7
Q ss_pred EeeCccCcEEEEEecCCCcEEEEeeCCCcEEEEeCCCCCeeee--e-----ccCCeEEEEEECCC---CCEEEEe---eC
Q 024372 56 TFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEKHS--F-----EHKHIVRACAFSED---THLLLTG---GF 122 (268)
Q Consensus 56 ~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~--~-----~~~~~v~~v~~~~~---~~~l~s~---~~ 122 (268)
.+...-..-+.++|.|++.++++--..|.|++++...+..... + ........++++|+ +..|+.. ..
T Consensus 26 ~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~ 105 (347)
T 3das_A 26 TVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSAS 105 (347)
T ss_dssp EEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSS
T ss_pred EeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCC
Confidence 3333334567899999999888776689999988655543221 1 12335778999995 3444432 23
Q ss_pred CCeEEEEECCCCC-----C-CCe----Ee---cCCcccEEEEEEeCCCCcEEEEee------------CCCeEEEEeCCC
Q 024372 123 EKILRIFDLNRPD-----A-PPR----EV---GNSSGSIRTVAWLHSDQTILSSCT------------DSGGVRLWDARS 177 (268)
Q Consensus 123 d~~i~~~d~~~~~-----~-~~~----~~---~~~~~~v~~~~~~~~~~~~~~~~~------------~d~~i~iwd~~~ 177 (268)
++.|.-|.+.... . ..+ .. ..| ....+.|.+++..+++.|. ..+.|.-.+...
T Consensus 106 ~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H--~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG 183 (347)
T 3das_A 106 DNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIH--NGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDG 183 (347)
T ss_dssp SEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSC--CCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTS
T ss_pred CCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCc--cCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCC
Confidence 4455556554311 0 011 11 122 2345788887754454442 123444445432
Q ss_pred C---------ceEEeecCCCCEEEEEECCCCcEEEEe
Q 024372 178 G---------KIVQTLETKSPVTSAEVSRDGRYITTA 205 (268)
Q Consensus 178 ~---------~~~~~~~~~~~v~~~~~s~~g~~l~~~ 205 (268)
. ..+....+ .....++|+|+|.+.++-
T Consensus 184 ~ip~~nPf~~~~i~a~G~-RNp~Gla~dp~G~L~~~d 219 (347)
T 3das_A 184 EPAPGNPFPGSPVYSYGH-RNVQGLAWDDKQRLFASE 219 (347)
T ss_dssp SBCTTCSSTTCCEEEBCC-SBCCEEEECTTCCEEEEE
T ss_pred CccCCCCCCCCeEEeeCC-CCcceEEECCCCCEEEEe
Confidence 1 12222222 345689999999887764
No 332
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=89.72 E-value=7.6 Score=32.00 Aligned_cols=222 Identities=12% Similarity=0.067 Sum_probs=115.7
Q ss_pred CCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCC-eEEEee---CccCcEEEEEecCC----CcEEEEeeC---C---
Q 024372 17 RPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGD-WIGTFE---GHKGAVWSCCLDAN----ALFSASGSA---D--- 82 (268)
Q Consensus 17 ~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~-~~~~~~---~h~~~V~~~~~~~~----~~~l~s~s~---D--- 82 (268)
..-.+++|.| ||.++ .+..++.|++++ .+++ .+..+. ........++++|+ +.+.++-+. +
T Consensus 29 ~~P~~ia~~p---dG~l~-V~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~ 103 (354)
T 3a9g_A 29 EVPWSIAPLG---GGRYL-VTERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHI 103 (354)
T ss_dssp SCEEEEEEEE---TTEEE-EEETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCE
T ss_pred CCCeEEEEcC---CCeEE-EEeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCc
Confidence 3456899985 88755 456678888886 3454 222221 12346788999997 544444332 3
Q ss_pred -CcEEEEeCCCCC--e-----e-eeec--cCCeEEEEEECCCCCEEEEeeC-------------CCeEEEEECCCCC---
Q 024372 83 -FTAKLWDALTGD--E-----K-HSFE--HKHIVRACAFSEDTHLLLTGGF-------------EKILRIFDLNRPD--- 135 (268)
Q Consensus 83 -~~v~iw~~~~~~--~-----~-~~~~--~~~~v~~v~~~~~~~~l~s~~~-------------d~~i~~~d~~~~~--- 135 (268)
..|..|+..... . + ..+. ..+....+.|.|++.+.++.+. .+.|..++....-
T Consensus 104 ~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~ 183 (354)
T 3a9g_A 104 RNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPAD 183 (354)
T ss_dssp EEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTT
T ss_pred ceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCC
Confidence 456667665431 1 1 1122 1123456899999987776432 2455555543210
Q ss_pred ----CCCeEecCCcccEEEEEEeCCCCcEEEEeeCCC---eEEEEeCCCCc------------------eEEee-cCCCC
Q 024372 136 ----APPREVGNSSGSIRTVAWLHSDQTILSSCTDSG---GVRLWDARSGK------------------IVQTL-ETKSP 189 (268)
Q Consensus 136 ----~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~---~i~iwd~~~~~------------------~~~~~-~~~~~ 189 (268)
........+.. ...++|.++.+.++++-...+ .|.+-. .+. .+..+ ..+..
T Consensus 184 npf~~~~i~a~G~rn-p~Gla~d~~~g~l~v~d~g~~~~dei~~i~--~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~a 260 (354)
T 3a9g_A 184 NPFPNSPIWSYGHRN-PQGIDWHRASGVMVATEHGPVGHDEVNIIL--KGGNYGWPLATGKAGRGEFVDPVIDTGSETWA 260 (354)
T ss_dssp SSSTTCCEEEECCSC-CCEEEECTTTCCEEEEECCSSSCCEEEEEC--TTCBCCTTTCCSCCCCTTSCCCSEECTTCCCC
T ss_pred CCCCCCcEEEEccCC-cceEEEeCCCCCEEEEecCCCCCcEEEEec--CCCcCCCCcccCCCCCCCCcCCEeecCCCCcC
Confidence 00111112222 245788875555655432221 243322 221 22333 23445
Q ss_pred EEEEEEC-------CCCcEEEEe-CCCeEEEEeCCCc-eee--eEEeC--CCCceeeEEcCCCCCEEEecc
Q 024372 190 VTSAEVS-------RDGRYITTA-DGSSVKFWDANHF-GLV--KGYNM--PCNTESASLEPKLGNIFIAGG 247 (268)
Q Consensus 190 v~~~~~s-------~~g~~l~~~-~~~~v~~wd~~~~-~~~--~~~~~--~~~~~~~~~~~~~~~~~~~gs 247 (268)
...+++- .+|+++++. ..+.|...++... ... ..+.. ...+..+.+.+ +|.++++..
T Consensus 261 p~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~p-DG~lyv~~~ 330 (354)
T 3a9g_A 261 PSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDD-DGGILISTS 330 (354)
T ss_dssp EEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECT-TSCEEEEEC
T ss_pred CcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECC-CCcEEEEEe
Confidence 7788883 567777665 4567888887653 222 22221 12344555555 577776653
No 333
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=89.69 E-value=9.1 Score=32.84 Aligned_cols=101 Identities=13% Similarity=0.062 Sum_probs=57.5
Q ss_pred eEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCC-eEec------CCcccEEEEEEeCC---CCcEEEEeeC-------
Q 024372 104 IVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPP-REVG------NSSGSIRTVAWLHS---DQTILSSCTD------- 166 (268)
Q Consensus 104 ~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~-~~~~------~~~~~v~~~~~~~~---~~~~~~~~~~------- 166 (268)
....++|.|+++++++-...+.|++++...+.... ..+. ...+....+++.|+ ++.+.++-+.
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~ 107 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTD 107 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCc
Confidence 34578999999977765444568888754332111 1111 12345678999885 5666555432
Q ss_pred -----CCeEEEEeCCCC-------ceE-EeecC--CCCEEEEEECCCCcEEEE
Q 024372 167 -----SGGVRLWDARSG-------KIV-QTLET--KSPVTSAEVSRDGRYITT 204 (268)
Q Consensus 167 -----d~~i~iwd~~~~-------~~~-~~~~~--~~~v~~~~~s~~g~~l~~ 204 (268)
...|.-+++..+ +.+ ..+.. ......++|.|||++.++
T Consensus 108 ~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~ 160 (454)
T 1cru_A 108 KELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYT 160 (454)
T ss_dssp CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEE
T ss_pred cccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEE
Confidence 134555554321 112 12322 235789999999987665
No 334
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=89.61 E-value=12 Score=34.07 Aligned_cols=190 Identities=12% Similarity=0.082 Sum_probs=89.5
Q ss_pred CCCcEEEEeeCC----CcEEEEeCCCCCeeeee-c-------cCCe-EEEEEECCCCCEEEEeeCCC------eEEEEEC
Q 024372 71 ANALFSASGSAD----FTAKLWDALTGDEKHSF-E-------HKHI-VRACAFSEDTHLLLTGGFEK------ILRIFDL 131 (268)
Q Consensus 71 ~~~~~l~s~s~D----~~v~iw~~~~~~~~~~~-~-------~~~~-v~~v~~~~~~~~l~s~~~d~------~i~~~d~ 131 (268)
.++.+++.||.+ ..+.++|..++.-.... . .... -..+.+..++++++.|+.++ .+.+||+
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 455666677653 35777787765422211 1 1111 12233322677778877543 4667787
Q ss_pred CCCCCCC-eEecCCcccEEEEEEeCCCCcEEEEeeCCC-eEEEEeCCCCceEEee-----c-CCCCEEEEEECCC-CcEE
Q 024372 132 NRPDAPP-REVGNSSGSIRTVAWLHSDQTILSSCTDSG-GVRLWDARSGKIVQTL-----E-TKSPVTSAEVSRD-GRYI 202 (268)
Q Consensus 132 ~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~-~i~iwd~~~~~~~~~~-----~-~~~~v~~~~~s~~-g~~l 202 (268)
.+..... ......... .+.+...++..++.+|.+.. .+.+||+.+.+=...- . .......+.+..+ ++++
T Consensus 476 ~t~~W~~~~~~p~~R~~-h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iy 554 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFR-HSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGI 554 (695)
T ss_dssp TTTEEEECCCCSBCCBS-CEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEE
T ss_pred CCCcEEECCCCCCCccc-ceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEE
Confidence 5432100 000011111 12222234444444433222 6899999876532211 1 1111223444554 5554
Q ss_pred E-EeC--C-----CeEEEEeCCCce------eeeEEeC---CCCceeeEEcCCCCCEEEeccCC--------CeEEEEEC
Q 024372 203 T-TAD--G-----SSVKFWDANHFG------LVKGYNM---PCNTESASLEPKLGNIFIAGGED--------MWVHVFDF 257 (268)
Q Consensus 203 ~-~~~--~-----~~v~~wd~~~~~------~~~~~~~---~~~~~~~~~~~~~~~~~~~gs~d--------~~i~~wd~ 257 (268)
+ +|. + ..+..||+.+.. ....-.. +.......... ++++++.||.+ ..|.+||.
T Consensus 555 v~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~v~~yd~ 633 (695)
T 2zwa_A 555 ILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYIT-PRKLLIVGGTSPSGLFDRTNSIISLDP 633 (695)
T ss_dssp EECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEE-TTEEEEECCBCSSCCCCTTTSEEEEET
T ss_pred EECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeC-CCEEEEECCccCCCCCCCCCeEEEEEC
Confidence 4 432 2 358889987654 1111111 11111222222 37888888743 35999998
Q ss_pred CCCcE
Q 024372 258 HTGEQ 262 (268)
Q Consensus 258 ~~g~~ 262 (268)
.+++-
T Consensus 634 ~t~~W 638 (695)
T 2zwa_A 634 LSETL 638 (695)
T ss_dssp TTTEE
T ss_pred CCCeE
Confidence 87653
No 335
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=89.53 E-value=7.8 Score=31.87 Aligned_cols=222 Identities=11% Similarity=0.025 Sum_probs=110.2
Q ss_pred CeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeE---EEe----eCccCcEEEEEecCC----CcEEEEeeC-----
Q 024372 18 PVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWI---GTF----EGHKGAVWSCCLDAN----ALFSASGSA----- 81 (268)
Q Consensus 18 ~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~---~~~----~~h~~~V~~~~~~~~----~~~l~s~s~----- 81 (268)
.-.+++|.| +|..|..+...+.|++++. .++.. ..+ ....+....++++|+ +.+.++-..
T Consensus 19 ~P~~i~~~p---dG~~l~V~e~~G~i~~~~~-~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g 94 (353)
T 2g8s_A 19 HPWALAFLP---DNHGMLITLRGGELRHWQA-GKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDG 94 (353)
T ss_dssp SEEEEEECS---TTCCEEEEETTTEEEEEET-TTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSS
T ss_pred CcEEEEEcC---CCCEEEEEeCCceEEEEeC-CCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCC
Confidence 456899985 8882444567788888874 33321 111 112345688999995 544444322
Q ss_pred --CCcEEEEeCCCCC----eeee----ec----cCCeEEEEEECCCCCEEEEeeC-------------CCeEEEEECCCC
Q 024372 82 --DFTAKLWDALTGD----EKHS----FE----HKHIVRACAFSEDTHLLLTGGF-------------EKILRIFDLNRP 134 (268)
Q Consensus 82 --D~~v~iw~~~~~~----~~~~----~~----~~~~v~~v~~~~~~~~l~s~~~-------------d~~i~~~d~~~~ 134 (268)
...|..++..... .... +. ..+.-..+.|.|++.+.++.+. .+.|.-++....
T Consensus 95 ~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~ 174 (353)
T 2g8s_A 95 KAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGE 174 (353)
T ss_dssp CEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSC
T ss_pred CceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCC
Confidence 2245555554321 1111 11 1122456899999976665433 245666675421
Q ss_pred C------------CCCeEecCCcccEEEEEEeCCCCcEEEEeeC-CCeEEEEeCCCCc----------------------
Q 024372 135 D------------APPREVGNSSGSIRTVAWLHSDQTILSSCTD-SGGVRLWDARSGK---------------------- 179 (268)
Q Consensus 135 ~------------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-d~~i~iwd~~~~~---------------------- 179 (268)
- ........+. -...++|.+..+.++++-.. ++.=.|.-+..+.
T Consensus 175 ~p~~npf~~~~~~~~~i~a~G~r-np~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~ 253 (353)
T 2g8s_A 175 IPDDNPFIKESGVRAEIWSYGIR-NPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAK 253 (353)
T ss_dssp CCTTCTTTTSTTSCTTEEEECCS-EEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCC
T ss_pred CCCCCCCcCCCCCCccEEEEcCc-CccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCccc
Confidence 0 0111111222 24567888855566554322 1111222122211
Q ss_pred ---------eEEeecCCCCEEEEEECC-------CCcEEEEe-CCCeEEEEeCCCceeeeEEeC----CCCceeeEEcCC
Q 024372 180 ---------IVQTLETKSPVTSAEVSR-------DGRYITTA-DGSSVKFWDANHFGLVKGYNM----PCNTESASLEPK 238 (268)
Q Consensus 180 ---------~~~~~~~~~~v~~~~~s~-------~g~~l~~~-~~~~v~~wd~~~~~~~~~~~~----~~~~~~~~~~~~ 238 (268)
.+..+.++..+..+++.+ +|+++++. ..+.|...++...+.+..... ...+..+.+.+
T Consensus 254 ~~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~p- 332 (353)
T 2g8s_A 254 GEIVAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGP- 332 (353)
T ss_dssp BSSCTTSCCCSEEESSCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECT-
T ss_pred CCCCCCccCCeEEeCCCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECC-
Confidence 112223334566777753 46776665 456777777665433322211 12344555555
Q ss_pred CCCEEEe
Q 024372 239 LGNIFIA 245 (268)
Q Consensus 239 ~~~~~~~ 245 (268)
+|.++++
T Consensus 333 dG~lyv~ 339 (353)
T 2g8s_A 333 DGYLYVL 339 (353)
T ss_dssp TSCEEEE
T ss_pred CCcEEEE
Confidence 5776664
No 336
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=89.35 E-value=9.7 Score=32.73 Aligned_cols=190 Identities=9% Similarity=0.099 Sum_probs=110.6
Q ss_pred CcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcE-EEEeeCCCcEEEEeCCC-CCeeeeec-c----CC
Q 024372 31 GFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALF-SASGSADFTAKLWDALT-GDEKHSFE-H----KH 103 (268)
Q Consensus 31 g~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~-l~s~s~D~~v~iw~~~~-~~~~~~~~-~----~~ 103 (268)
.+.+|--. ..+++|+|+++.+.++.+.-.+ .|..=.|-....+ |+| +..|+-|++.. ..+...+. | ..
T Consensus 77 ~~iiALra-g~~lQiFnle~K~klks~~~~e-~VvfWkWis~~~l~lVT---~taVyHWsi~~~s~P~kvFdR~~~L~~~ 151 (494)
T 1bpo_A 77 SKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISLNTVALVT---DNAVYHWSMEGESQPVKMFDRHSSLAGC 151 (494)
T ss_dssp SSCEEEEE-TTEEEEEETTTTEEEEEEECSS-CCCEEEEEETTEEEEEC---SSEEEEEESSSSCCCEEEEECCGGGTTC
T ss_pred CcEEEEec-CCeEEEEchHHhhhhcceecCC-CceEEEecCCCeEEEEc---CCeeEEecccCCCCchhheecchhcccc
Confidence 34555443 7789999999988777766544 4444455433333 333 56899999864 23444443 2 23
Q ss_pred eEEEEEECCCCCEEEEee-------CCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCC---CcEEEEeeC---CCeE
Q 024372 104 IVRACAFSEDTHLLLTGG-------FEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSD---QTILSSCTD---SGGV 170 (268)
Q Consensus 104 ~v~~v~~~~~~~~l~s~~-------~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~~~~~~~~---d~~i 170 (268)
.|.....+++.++++..+ -.|.+.+|..+. ...+.+.+|.+....+.. +.. ..++.-+.. .+.+
T Consensus 152 QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er--~~sQ~ieGhaa~F~~~~~-~g~~~~~~lf~fa~r~~~g~kL 228 (494)
T 1bpo_A 152 QIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR--KVSQPIEGHAASFAQFKM-EGNAEESTLFCFAVRGQAGGKL 228 (494)
T ss_dssp EEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTT--CCEEEECCSEEEEEEEEC-TTCSSEEEEEEEEECSTTCCEE
T ss_pred eEEEEEECCCCCeEEEEeecccCCcccceEEEeeccc--cccchheeeeeeeEEEec-CCCCCCceEEEEEEecCCCcEE
Confidence 566677788999887533 236788998763 345666666544433322 111 123332222 2678
Q ss_pred EEEeCCCC---c------eEEe-ecC---CCCEEEEEECCCCcEE-EEeCCCeEEEEeCCCceeeeEEeCCC
Q 024372 171 RLWDARSG---K------IVQT-LET---KSPVTSAEVSRDGRYI-TTADGSSVKFWDANHFGLVKGYNMPC 228 (268)
Q Consensus 171 ~iwd~~~~---~------~~~~-~~~---~~~v~~~~~s~~g~~l-~~~~~~~v~~wd~~~~~~~~~~~~~~ 228 (268)
.|-++... . .+.. +.. .....++.+++...++ +...-|.|.++|++++.++..-.+..
T Consensus 229 hi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~ 300 (494)
T 1bpo_A 229 HIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISG 300 (494)
T ss_dssp EEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCS
T ss_pred EEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeecccC
Confidence 88887432 1 1111 111 1224567777765444 45566899999999998886555543
No 337
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=88.96 E-value=8.7 Score=31.67 Aligned_cols=213 Identities=10% Similarity=0.137 Sum_probs=120.9
Q ss_pred CeEEeeCCCCCeE--EEeeCccCcEEEEEecCCCcEEEEeeCCCcEEEEeCCCCCeeeeeccCCeEEEEEECCCCCEEEE
Q 024372 42 SPMLRNGETGDWI--GTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLT 119 (268)
Q Consensus 42 ~i~iw~~~~~~~~--~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~s 119 (268)
++.|-|...+..+ +.+.+ ...| ++|....+|--+ ..+++++|+++......+...+.|..=.|-.+. .|+-
T Consensus 50 ~VvIiDl~n~~~~~Rrpi~A-dsAI----MnP~~~ViALra-g~~LQiFnletK~klks~~~~e~VvfWkWis~~-~L~l 122 (365)
T 2xzh_A 50 QVVIIDMNDPSNPIRRPISA-DSAI----MNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLN-TVAL 122 (365)
T ss_dssp EEEEEETTSTTSCEEEECCC-SEEE----ECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSSCEEEEEECSSS-EEEE
T ss_pred EEEEEECCCCCCcccccccc-ceee----eCCCccEEEEec-CCeEEEechHHhhhhcceecCCccEEEEecCCC-eEEE
Confidence 5677787775433 22222 1222 578888776544 678999999999988888877777666664333 4444
Q ss_pred eeCCCeEEEEECCCCCCCCeEecCCc----ccEEEEEEeCCCCcEEEEeeC------CCeEEEEeCCCCceEEeecCCCC
Q 024372 120 GGFEKILRIFDLNRPDAPPREVGNSS----GSIRTVAWLHSDQTILSSCTD------SGGVRLWDARSGKIVQTLETKSP 189 (268)
Q Consensus 120 ~~~d~~i~~~d~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~~~~~~~~------d~~i~iwd~~~~~~~~~~~~~~~ 189 (268)
.+ +..+.-|+++....+...+..|. .-|..-..+++..++++.|-. .|.+.+|..+.+ .-+.+++|..
T Consensus 123 VT-~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa 200 (365)
T 2xzh_A 123 VT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAA 200 (365)
T ss_dssp EE-SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEECCSEE
T ss_pred Ec-CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc-ccceeeeeee
Confidence 33 35688999875444444443332 234444556777777666531 267889988743 3445565532
Q ss_pred EEEEEECCCC-----cEEE-Ee---CCCeEEEEeCCCc---e-----eeeEEeCCC----C-ceeeEEcCCCCCEEEecc
Q 024372 190 VTSAEVSRDG-----RYIT-TA---DGSSVKFWDANHF---G-----LVKGYNMPC----N-TESASLEPKLGNIFIAGG 247 (268)
Q Consensus 190 v~~~~~s~~g-----~~l~-~~---~~~~v~~wd~~~~---~-----~~~~~~~~~----~-~~~~~~~~~~~~~~~~gs 247 (268)
.- ..+-.+| .++. +. .++.+++-++... . .......+. . +.+...++. -..+..-.
T Consensus 201 ~F-~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~k-ygviyviT 278 (365)
T 2xzh_A 201 SF-AQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEK-HDVVFLIT 278 (365)
T ss_dssp EE-EEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETT-TTEEEEEE
T ss_pred ee-EEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEeccc-CCEEEEEe
Confidence 21 1222222 1222 22 2357888887432 1 011111111 1 233444443 34555666
Q ss_pred CCCeEEEEECCCCcEEee
Q 024372 248 EDMWVHVFDFHTGEQIAI 265 (268)
Q Consensus 248 ~d~~i~~wd~~~g~~~~~ 265 (268)
.-|.|++||+.||..+..
T Consensus 279 K~G~ihlyDleTgt~i~~ 296 (365)
T 2xzh_A 279 KYGYIHLYDLETGTCIYM 296 (365)
T ss_dssp TTSEEEEEETTTCCEEEE
T ss_pred CCcEEEEEEcccCcEEEE
Confidence 778999999999988754
No 338
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=88.64 E-value=14 Score=33.72 Aligned_cols=230 Identities=10% Similarity=0.021 Sum_probs=110.5
Q ss_pred CCCCcEEEEEeC-----CCCeEEeeCCCCCeEE-Eee-CccC------cEEEEEecCCCcEEEEe----------eCCCc
Q 024372 28 TPDGFFLVSASK-----DSSPMLRNGETGDWIG-TFE-GHKG------AVWSCCLDANALFSASG----------SADFT 84 (268)
Q Consensus 28 ~~dg~~l~s~s~-----d~~i~iw~~~~~~~~~-~~~-~h~~------~V~~~~~~~~~~~l~s~----------s~D~~ 84 (268)
+|||++++.+-. -.+++++|+.+++.+. .|. .-+. +-..++|-.+..++++. +...+
T Consensus 138 ~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~~~~~~~~ 217 (711)
T 4hvt_A 138 FQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEITSSLYPNS 217 (711)
T ss_dssp SSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBCTTSSBCE
T ss_pred CCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcCcCCCCCE
Confidence 358888877622 2367899999998763 222 0001 00223565444444432 12367
Q ss_pred EEEEeCCCCCe--eeeec--cCCeEEEEEECCCCC-----EEEEee---CCCeEEEEECCCCCCCCeEecCCcccEEEEE
Q 024372 85 AKLWDALTGDE--KHSFE--HKHIVRACAFSEDTH-----LLLTGG---FEKILRIFDLNRPDAPPREVGNSSGSIRTVA 152 (268)
Q Consensus 85 v~iw~~~~~~~--~~~~~--~~~~v~~v~~~~~~~-----~l~s~~---~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~ 152 (268)
|+.|.+.+... ...+. ....-.....+++++ .+++.+ ....+.+.|...+......+....... +.
T Consensus 218 v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~ 295 (711)
T 4hvt_A 218 LYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKINMPSDAT--LQ 295 (711)
T ss_dssp EEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEECCSCTTCE--EE
T ss_pred EEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEeecCCcce--Ee
Confidence 99999877642 22222 222222344566655 345433 224455556543222112221111111 12
Q ss_pred EeCCCCcEEEEe----------eCCCeEEEEeCCCC-------ceEEe-ecC--CCCEEEEEECCCCcEEEEeCCC--eE
Q 024372 153 WLHSDQTILSSC----------TDSGGVRLWDARSG-------KIVQT-LET--KSPVTSAEVSRDGRYITTADGS--SV 210 (268)
Q Consensus 153 ~~~~~~~~~~~~----------~~d~~i~iwd~~~~-------~~~~~-~~~--~~~v~~~~~s~~g~~l~~~~~~--~v 210 (268)
..+.+ .+++.. ...+.|...|+.++ +..+. +.. ...+..+.+.++.-++..-.++ .+
T Consensus 296 ~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~l 374 (711)
T 4hvt_A 296 GSFKE-YVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKDRVFLATYDNVVAKV 374 (711)
T ss_dssp EEETT-EEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSSCEEEEEEETTEEEE
T ss_pred eeECC-EEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECCEEEEEEEECCEEEE
Confidence 23333 333321 13467888888653 22232 332 2347788888875444444443 57
Q ss_pred EEEeCCCce-eeeE-EeCCC-Cce-eeEEcCCCCCEEEeccC---CCeEEEEECCCCc
Q 024372 211 KFWDANHFG-LVKG-YNMPC-NTE-SASLEPKLGNIFIAGGE---DMWVHVFDFHTGE 261 (268)
Q Consensus 211 ~~wd~~~~~-~~~~-~~~~~-~~~-~~~~~~~~~~~~~~gs~---d~~i~~wd~~~g~ 261 (268)
.++|+.... .++. ...+. ... .....+..+.++++.+. =..++.+|.. ++
T Consensus 375 ~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~-~~ 431 (711)
T 4hvt_A 375 VTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT-HE 431 (711)
T ss_dssp EEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT-SC
T ss_pred EEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC-Cc
Confidence 778875543 2233 33432 122 22233434556665443 3568888876 44
No 339
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=88.01 E-value=20 Score=35.80 Aligned_cols=213 Identities=9% Similarity=0.103 Sum_probs=111.0
Q ss_pred CeEEeeCCCCCeE--EEeeCccCcEEEEEecCCCcEEEEeeCCCcEEEEeCCCCCeeeeeccCCeEEEEEECCCCCEEEE
Q 024372 42 SPMLRNGETGDWI--GTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLT 119 (268)
Q Consensus 42 ~i~iw~~~~~~~~--~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~s 119 (268)
++.|-|...+..+ +.+.+ .+.| ++|....+|--+ ..++.|+|+.+......+...++|..=.|-.+. .|+-
T Consensus 49 ~vvIidl~~~~~~~rrpi~A-dsAI----MnP~~~iiALra-g~~lQiFnl~~k~klks~~~~e~VvfWkWis~~-~l~l 121 (1630)
T 1xi4_A 49 QVVIIDMNDPSNPIRRPISA-DSAI----MNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLN-TVAL 121 (1630)
T ss_pred eEEEEECCCCCCcccccccc-hhhc----cCCCcceEEEec-CCeEEEeehHHhhhhcccccCCCceEEEecCCC-eeEE
Confidence 5677777765433 11221 1122 577777766443 679999999988887777766666555553332 3433
Q ss_pred eeCCCeEEEEECCCCCCCCeEecCC----cccEEEEEEeCCCCcEEEEee------CCCeEEEEeCCCCceEEeecCCCC
Q 024372 120 GGFEKILRIFDLNRPDAPPREVGNS----SGSIRTVAWLHSDQTILSSCT------DSGGVRLWDARSGKIVQTLETKSP 189 (268)
Q Consensus 120 ~~~d~~i~~~d~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~~~~~------~d~~i~iwd~~~~~~~~~~~~~~~ 189 (268)
.+ +..+.-|++.....+...+..| ...|..-.-+++..++++.|- -.|.+.+|..+.+. -+.+++|..
T Consensus 122 VT-~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~-sQ~iegha~ 199 (1630)
T 1xi4_A 122 VT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAA 199 (1630)
T ss_pred Ec-CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc-chhhhHhHh
Confidence 33 3568899986433333333222 223444455677777766653 22678888876432 222333321
Q ss_pred -EEEEEEC--CC-CcEEEEe----CCCeEEEEeCCCc-eeeeEE-------eCCC-----CceeeEEcCCCCCEEEeccC
Q 024372 190 -VTSAEVS--RD-GRYITTA----DGSSVKFWDANHF-GLVKGY-------NMPC-----NTESASLEPKLGNIFIAGGE 248 (268)
Q Consensus 190 -v~~~~~s--~~-g~~l~~~----~~~~v~~wd~~~~-~~~~~~-------~~~~-----~~~~~~~~~~~~~~~~~gs~ 248 (268)
...+.+. +. ..++..+ .++.+++-++.+. ..-..| ..+. -+.+...++. -..+..-+.
T Consensus 200 ~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k-~g~iy~itk 278 (1630)
T 1xi4_A 200 SFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEK-HDVVFLITK 278 (1630)
T ss_pred hhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccc-cCEEEEEec
Confidence 1111111 11 1222211 2467777777432 000111 1111 1223333442 334556677
Q ss_pred CCeEEEEECCCCcEEe
Q 024372 249 DMWVHVFDFHTGEQIA 264 (268)
Q Consensus 249 d~~i~~wd~~~g~~~~ 264 (268)
-|.|++||+.||..+.
T Consensus 279 ~G~~~~~d~~t~~~i~ 294 (1630)
T 1xi4_A 279 YGYIHLYDLETGTCIY 294 (1630)
T ss_pred CceEEEEecccchhhh
Confidence 7889999998887653
No 340
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=87.99 E-value=9 Score=30.63 Aligned_cols=180 Identities=13% Similarity=0.126 Sum_probs=82.0
Q ss_pred EEEeeCCCcEEEEeCCCCCeee-eecc-CCeEEEEEECCCCCEEEEeeCC----C-------eEEEEECCCCCCCC-eEe
Q 024372 76 SASGSADFTAKLWDALTGDEKH-SFEH-KHIVRACAFSEDTHLLLTGGFE----K-------ILRIFDLNRPDAPP-REV 141 (268)
Q Consensus 76 l~s~s~D~~v~iw~~~~~~~~~-~~~~-~~~v~~v~~~~~~~~l~s~~~d----~-------~i~~~d~~~~~~~~-~~~ 141 (268)
++-|+. .+..||..++.-.. .... ...........++++++.|+.. + .+..||..+.+... ...
T Consensus 19 ~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~ 96 (318)
T 2woz_A 19 LLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPL 96 (318)
T ss_dssp EEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCB
T ss_pred hhcccc--ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCC
Confidence 344443 36778887665322 1111 1111222234567788888731 1 15667765432100 001
Q ss_pred cCCcccEEEEEEeCCCCcEEEEeeCC------CeEEEEeCCCCceEEeecCCCC-E-EEEEECCCCcEEE-EeC------
Q 024372 142 GNSSGSIRTVAWLHSDQTILSSCTDS------GGVRLWDARSGKIVQTLETKSP-V-TSAEVSRDGRYIT-TAD------ 206 (268)
Q Consensus 142 ~~~~~~v~~~~~~~~~~~~~~~~~~d------~~i~iwd~~~~~~~~~~~~~~~-v-~~~~~s~~g~~l~-~~~------ 206 (268)
......-..+. . ++..++.+|... +.+.++|+.+.+=...-....+ . .+++. .++++++ ++.
T Consensus 97 p~~r~~~~~~~-~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~ 173 (318)
T 2woz_A 97 PSARCLFGLGE-V-DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS-HNGMIYCLGGKTDDKKC 173 (318)
T ss_dssp SSCBCSCEEEE-E-TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE-ETTEEEEECCEESSSCB
T ss_pred CccccccceEE-E-CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE-ECCEEEEEcCCCCCCCc
Confidence 11111111222 2 344444444321 3588889887653322111111 1 12222 4555544 332
Q ss_pred CCeEEEEeCCCceeeeEEeCCCCc--eeeEEcCCCCCEEEeccCC-----CeEEEEECCCCcE
Q 024372 207 GSSVKFWDANHFGLVKGYNMPCNT--ESASLEPKLGNIFIAGGED-----MWVHVFDFHTGEQ 262 (268)
Q Consensus 207 ~~~v~~wd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~gs~d-----~~i~~wd~~~g~~ 262 (268)
-..+.++|..+..-...-..+... -..+.. ++++++.||.+ ..+.+||..+++-
T Consensus 174 ~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 234 (318)
T 2woz_A 174 TNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTNKW 234 (318)
T ss_dssp CCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTCCE
T ss_pred cceEEEEcCCCCEEEECCCCCCCcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCCeE
Confidence 135889998765433222222221 122222 47888888753 3578899876653
No 341
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=87.25 E-value=14 Score=31.87 Aligned_cols=214 Identities=9% Similarity=0.117 Sum_probs=119.5
Q ss_pred CeEEeeCCCCCeE--EEeeCccCcEEEEEecCCCcEEEEeeCCCcEEEEeCCCCCeeeeeccCCeEEEEEECCCCCEEEE
Q 024372 42 SPMLRNGETGDWI--GTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLT 119 (268)
Q Consensus 42 ~i~iw~~~~~~~~--~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~s 119 (268)
++.|-|...+..+ +.+.+ .+. =++|....+|--+ ..++.++|+++......+...+.|..=.|-.+ +.|+-
T Consensus 49 ~vvIiDl~~~~~~~rrpi~A-dsA----IMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e~VvfWkWis~-~~l~l 121 (494)
T 1bpo_A 49 QVVIIDMNDPSNPIRRPISA-DSA----IMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISL-NTVAL 121 (494)
T ss_dssp EEEEEETTSTTSCEEEECCC-SEE----EECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSSCCCEEEEEET-TEEEE
T ss_pred eEEEEECCCCCcceeccccc-cee----eeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCCCceEEEecCC-CeEEE
Confidence 5667777775433 22222 112 2578777776544 67999999999988888876666654444322 34444
Q ss_pred eeCCCeEEEEECCCCCCCCeEecCC----cccEEEEEEeCCCCcEEEEeeC------CCeEEEEeCCCCceEEeecCCCC
Q 024372 120 GGFEKILRIFDLNRPDAPPREVGNS----SGSIRTVAWLHSDQTILSSCTD------SGGVRLWDARSGKIVQTLETKSP 189 (268)
Q Consensus 120 ~~~d~~i~~~d~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~~~~~~------d~~i~iwd~~~~~~~~~~~~~~~ 189 (268)
.+ +..+.-|+++....+...+..| ..-|..-..+++..++++.|-. .|.+.+|..+.+. -+.+++|..
T Consensus 122 VT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-sQ~ieGhaa 199 (494)
T 1bpo_A 122 VT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAA 199 (494)
T ss_dssp EC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCC-EEEECCSEE
T ss_pred Ec-CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccc-cchheeeee
Confidence 43 4578899987544444444333 2234444557777887666531 2678899887543 344555532
Q ss_pred E-EEEEECCCC---cEEE-Ee---CCCeEEEEeCCCc---ee---eeEE--eCCC----C-ceeeEEcCCCCCEEEeccC
Q 024372 190 V-TSAEVSRDG---RYIT-TA---DGSSVKFWDANHF---GL---VKGY--NMPC----N-TESASLEPKLGNIFIAGGE 248 (268)
Q Consensus 190 v-~~~~~s~~g---~~l~-~~---~~~~v~~wd~~~~---~~---~~~~--~~~~----~-~~~~~~~~~~~~~~~~gs~ 248 (268)
. ..+.+..+. .++. +. .++.+++-++... .. .+.. ..+. . +.+...++. -..+..-..
T Consensus 200 ~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~k-ygviyviTK 278 (494)
T 1bpo_A 200 SFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEK-HDVVFLITK 278 (494)
T ss_dssp EEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETT-TTEEEEEET
T ss_pred eeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEeccc-CCEEEEEec
Confidence 1 122221111 1222 22 2467888887532 00 1111 1111 1 234444543 345556677
Q ss_pred CCeEEEEECCCCcEEee
Q 024372 249 DMWVHVFDFHTGEQIAI 265 (268)
Q Consensus 249 d~~i~~wd~~~g~~~~~ 265 (268)
-|.|++||+.||..+..
T Consensus 279 ~G~i~lyDleTgt~i~~ 295 (494)
T 1bpo_A 279 YGYIHLYDLETGTCIYM 295 (494)
T ss_dssp TSEEEEEETTTCCEEEE
T ss_pred CceEEEEecccceeeee
Confidence 78999999999987654
No 342
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=87.05 E-value=14 Score=31.72 Aligned_cols=102 Identities=10% Similarity=0.050 Sum_probs=56.0
Q ss_pred cEEEEEecCCCcEEEEeeCCCcEEEEeCCCCCeee--eec-------cCCeEEEEEECCC---CCEEEEeeC--------
Q 024372 63 AVWSCCLDANALFSASGSADFTAKLWDALTGDEKH--SFE-------HKHIVRACAFSED---THLLLTGGF-------- 122 (268)
Q Consensus 63 ~V~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~--~~~-------~~~~v~~v~~~~~---~~~l~s~~~-------- 122 (268)
.-+.++|.|+++++++-...+.|++++..++.... .+. .......++|+|+ +..|+.+..
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~ 107 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTD 107 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCc
Confidence 45689999999988776544578888765444322 221 1234668999995 445554432
Q ss_pred -----CCeEEEEECCCCC-------CCCeEec-CCcccEEEEEEeCCCCcEEEEe
Q 024372 123 -----EKILRIFDLNRPD-------APPREVG-NSSGSIRTVAWLHSDQTILSSC 164 (268)
Q Consensus 123 -----d~~i~~~d~~~~~-------~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~ 164 (268)
...|..|+..... .....+. ........++|.+++..+++.+
T Consensus 108 ~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 108 KELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred cccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 1245555543211 0111111 1112357788888876555554
No 343
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=85.15 E-value=9.1 Score=36.31 Aligned_cols=37 Identities=16% Similarity=0.058 Sum_probs=31.4
Q ss_pred cEEEEEecCCCcEEEEeeCCCcEEEEeCCCCCeeeee
Q 024372 63 AVWSCCLDANALFSASGSADFTAKLWDALTGDEKHSF 99 (268)
Q Consensus 63 ~V~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~ 99 (268)
.+.+++..++..++.+-+.|+++|+|++.+++++.+.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 4566677778889999999999999999999887765
No 344
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=77.65 E-value=7.3 Score=34.58 Aligned_cols=89 Identities=13% Similarity=0.178 Sum_probs=55.6
Q ss_pred eEEEEeCCC----Cc-eEEeecCCCCEEEEEECCCCcEEEEeC--CCeEEEEeCCCcee-------------eeEEeCCC
Q 024372 169 GVRLWDARS----GK-IVQTLETKSPVTSAEVSRDGRYITTAD--GSSVKFWDANHFGL-------------VKGYNMPC 228 (268)
Q Consensus 169 ~i~iwd~~~----~~-~~~~~~~~~~v~~~~~s~~g~~l~~~~--~~~v~~wd~~~~~~-------------~~~~~~~~ 228 (268)
.+.+-|.++ ++ .+..+........+.++|||++++.+. +.+|.++|.++... +.......
T Consensus 299 gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~Gl 378 (638)
T 3sbq_A 299 KTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGL 378 (638)
T ss_dssp CCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCS
T ss_pred CeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCC
Confidence 466667665 22 233333333345788999999998765 57899999874211 11112222
Q ss_pred CceeeEEcCCCCCEEEeccCCCeEEEEECC
Q 024372 229 NTESASLEPKLGNIFIAGGEDMWVHVFDFH 258 (268)
Q Consensus 229 ~~~~~~~~~~~~~~~~~gs~d~~i~~wd~~ 258 (268)
++.-..|.+ .|..+.+-.-|+.|--||+.
T Consensus 379 GPlHt~Fd~-~G~aYTtlfidSqvvkWni~ 407 (638)
T 3sbq_A 379 GPLHTTFDG-RGNAYTTLFIDSQVVKWNME 407 (638)
T ss_dssp CEEEEEECS-SSEEEEEETTTTEEEEEEHH
T ss_pred cccEEEECC-CCceEeeeeecceEEEEecc
Confidence 344455666 47666677899999999985
No 345
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=75.10 E-value=57 Score=30.88 Aligned_cols=70 Identities=6% Similarity=-0.014 Sum_probs=44.6
Q ss_pred CEEEEEECCCCcEEE-EeCCCeEEEEeCCCceeeeEEeCCCC------ceeeEEcCCCCCEEEec---cCCCeEEEEECC
Q 024372 189 PVTSAEVSRDGRYIT-TADGSSVKFWDANHFGLVKGYNMPCN------TESASLEPKLGNIFIAG---GEDMWVHVFDFH 258 (268)
Q Consensus 189 ~v~~~~~s~~g~~l~-~~~~~~v~~wd~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~g---s~d~~i~~wd~~ 258 (268)
.+.+++..++..++. .+.|+++|+|++.++.++.+...... .......+..+.++.+- ..++..++|.+.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL~~~~~~~~~~~~~~~~~~~~~~i~v~~s~~~~g~F~~~~~~ 316 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIELSQTILPLQSFPYLTSDHTTNSFIALYYPDNSHGSFSIYKLN 316 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEECCCCCCCSCCCCCEEECSSSTTEEEEEECCSSSCEEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeecccccCCccccccccccCCCcccEEEEEEcCCCCcEEEEEEEe
Confidence 366777788877765 47899999999999999888765321 11222333344444432 345677777653
No 346
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=74.68 E-value=74 Score=31.94 Aligned_cols=187 Identities=9% Similarity=0.081 Sum_probs=99.0
Q ss_pred CCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcE-EEEeeCCCcEEEEeCCC-CCeeeeec-c----C
Q 024372 30 DGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALF-SASGSADFTAKLWDALT-GDEKHSFE-H----K 102 (268)
Q Consensus 30 dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~-l~s~s~D~~v~iw~~~~-~~~~~~~~-~----~ 102 (268)
..+.+|-- ...+++|+|+++.+.++.+.-.+ +|..=.|-....+ ++| +..|+-|++.. ..+...+. | .
T Consensus 76 ~~~iiALr-ag~~lQiFnl~~k~klks~~~~e-~VvfWkWis~~~l~lVT---~~aVyHW~~~~~s~P~k~fdR~~~L~~ 150 (1630)
T 1xi4_A 76 ASKVIALK-AGKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISLNTVALVT---DNAVYHWSMEGESQPVKMFDRHSSLAG 150 (1630)
T ss_pred CcceEEEe-cCCeEEEeehHHhhhhcccccCC-CceEEEecCCCeeEEEc---CCeEEEeccCCCCccHHHHhcchhccc
Confidence 33455444 46788999998877665554333 4544455444433 344 56899999964 22333332 2 2
Q ss_pred CeEEEEEECCCCCEEEEee-------CCCeEEEEECCCCCCCCeEecCCcccEEEEEEe--CCCCcEEEEee---CCCeE
Q 024372 103 HIVRACAFSEDTHLLLTGG-------FEKILRIFDLNRPDAPPREVGNSSGSIRTVAWL--HSDQTILSSCT---DSGGV 170 (268)
Q Consensus 103 ~~v~~v~~~~~~~~l~s~~-------~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~~~~~---~d~~i 170 (268)
..|.....+++.++++..+ -.|.+.+|..+.. ..+.+.+|.+....+... +....++.-+. ..+.+
T Consensus 151 ~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~--~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kL 228 (1630)
T 1xi4_A 151 CQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK--VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKL 228 (1630)
T ss_pred CeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc--cchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceE
Confidence 3455666788888877433 3477889987643 334444443332222211 11112222111 12578
Q ss_pred EEEeCCCC---c-eE-----Ee-ecC---CCCEEEEEECCCCcEE-EEeCCCeEEEEeCCCceeeeE
Q 024372 171 RLWDARSG---K-IV-----QT-LET---KSPVTSAEVSRDGRYI-TTADGSSVKFWDANHFGLVKG 223 (268)
Q Consensus 171 ~iwd~~~~---~-~~-----~~-~~~---~~~v~~~~~s~~g~~l-~~~~~~~v~~wd~~~~~~~~~ 223 (268)
.|-++... . .. .. ++. .....++.+++...++ +...-|.|.++|+.++.++..
T Consensus 229 hi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~ 295 (1630)
T 1xi4_A 229 HIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYM 295 (1630)
T ss_pred EEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhh
Confidence 88887432 1 11 10 111 1123456666654443 445567899999998876643
No 347
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=70.30 E-value=13 Score=36.06 Aligned_cols=28 Identities=18% Similarity=0.223 Sum_probs=24.9
Q ss_pred CCCEEEeccCCCeEEEEECCCCcEEeec
Q 024372 239 LGNIFIAGGEDMWVHVFDFHTGEQIAIT 266 (268)
Q Consensus 239 ~~~~~~~gs~d~~i~~wd~~~g~~~~~~ 266 (268)
+..++++-+.|..+|+|++.+|+.+...
T Consensus 248 ~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 248 TYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp TTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred CccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 4678889999999999999999998764
No 348
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=64.40 E-value=5.4 Score=38.68 Aligned_cols=37 Identities=19% Similarity=0.085 Sum_probs=29.9
Q ss_pred EEEEEecCCCcEEEEeeCCCcEEEEeCCCCCeeeeec
Q 024372 64 VWSCCLDANALFSASGSADFTAKLWDALTGDEKHSFE 100 (268)
Q Consensus 64 V~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~ 100 (268)
+.+++..++..++.+-+.|+++|+|++.+++++.+..
T Consensus 240 ~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp BSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 3444556777899999999999999999998877653
No 349
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=62.05 E-value=56 Score=25.71 Aligned_cols=216 Identities=12% Similarity=0.036 Sum_probs=108.2
Q ss_pred CeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCC-CCeEEEeeCccCcEEEEEecCCCcEEEEeeCCCcEEEEeCCCCCee
Q 024372 18 PVVDLFYSPITPDGFFLVSASKDSSPMLRNGET-GDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEK 96 (268)
Q Consensus 18 ~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~-~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~ 96 (268)
.|..++-- ....++. . |+++..|-... +++ ..=..-...|..++.......++ . |+.|+.|-.......
T Consensus 25 ~i~~ia~G----~~h~~~l-~-~G~v~~wG~n~~Gql-g~p~~~~~~i~~ia~G~~hs~~l--~-~G~v~~wG~n~~Gql 94 (282)
T 3qhy_B 25 GVDAIAGG----YFHGLAL-K-GGKVLGWGANLNGQL-TMPAATQSGVDAIAAGNYHSLAL--K-DGEVIAWGGNEDGQT 94 (282)
T ss_dssp SCCEEEEC----SSEEEEE-E-TTEEEEEECCSSSTT-SCCGGGGSCCCEEEECSSEEEEE--E-TTEEEEEECCTTSTT
T ss_pred CCcEEEeC----CCeEEEE-E-CCEEEEEeCCCCCCC-CCCccCCCCEEEEEeCCCEEEEE--E-CCEEEEeeCCCCCCC
Confidence 56666653 3334444 5 89999885443 222 10001123566777665444433 3 899999975432211
Q ss_pred e-eeccCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEeeCCCeEEEEeC
Q 024372 97 H-SFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDA 175 (268)
Q Consensus 97 ~-~~~~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~iwd~ 175 (268)
- .......|..++...+....+ . ++.+..|-.+........ ......+..++- ...+.++. . +|.|..|-.
T Consensus 95 g~P~~~~~~v~~ia~G~~hs~al--~-~G~v~~wG~n~~gqlg~~-~~~~~~i~~i~~--G~~~~~~l-~-~G~v~~wG~ 166 (282)
T 3qhy_B 95 TVPAEARSGVDAIAAGAWASYAL--K-DGKVIAWGDDSDGQTTVP-AEAQSGVTALDG--GVYTALAV-K-NGGVIAWGD 166 (282)
T ss_dssp CCCGGGSSSEEEEEEETTEEEEE--E-TTEEEEEECCTTSTTSCC-GGGGSSEEEEEE--CSSEEEEE-E-TTEEEEEEC
T ss_pred CCCcccCCCeEEEECcCCEEEEE--e-CCeEEEecCCCCCcCCCC-ccCCCCeEEEEc--ccCEEEEE-E-CCEEEEecC
Confidence 1 111234577777665543333 3 899999975542221111 112234665553 22333333 3 599999976
Q ss_pred CC-CceEEeecCCCCEEEEEECCCCcEEEEeCCCeEEEEeCCCceeee-EEeCCCCceeeEEcCCCCCEEEeccCCCeEE
Q 024372 176 RS-GKIVQTLETKSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVK-GYNMPCNTESASLEPKLGNIFIAGGEDMWVH 253 (268)
Q Consensus 176 ~~-~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~v~~wd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~gs~d~~i~ 253 (268)
.. ++.-........+..++...+..+++ .++.|..|=...+..+- .......+..+..- ....++.. |+.|+
T Consensus 167 n~~gqlg~p~~~~~~v~~i~~G~~hs~al--~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G--~~h~~al~--~g~v~ 240 (282)
T 3qhy_B 167 NYFGQTTVPAEAQSGVDDVAGGIFHSLAL--KDGKVIAWGDNRYKQTTVPTEALSGVSAIASG--EWYSLALK--NGKVI 240 (282)
T ss_dssp CTTSTTSCCGGGGSSEEEEEECSSEEEEE--ETTEEEEEECCTTSTTCCCGGGGSSCCEEEEC--SSCEEEEE--TTEEE
T ss_pred CCCCCCCCceecCCCeEEEEecCCEEEEE--ECCeEEEEECCCCCCCCCCcccCCCceEEEcC--CCEEEEEE--CCEEE
Confidence 43 22111111124577777666655544 57889888654432221 00111122233322 23334433 88888
Q ss_pred EEEC
Q 024372 254 VFDF 257 (268)
Q Consensus 254 ~wd~ 257 (268)
.|=.
T Consensus 241 ~wG~ 244 (282)
T 3qhy_B 241 AWGS 244 (282)
T ss_dssp EEST
T ss_pred EecC
Confidence 8854
No 350
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=61.81 E-value=11 Score=34.34 Aligned_cols=30 Identities=7% Similarity=0.109 Sum_probs=25.9
Q ss_pred CCcEEEEEeCCCCeEEeeCCCCCeEEEeeC
Q 024372 30 DGFFLVSASKDSSPMLRNGETGDWIGTFEG 59 (268)
Q Consensus 30 dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~ 59 (268)
+..+|++-+.|+++|+|+..+++++.+..-
T Consensus 230 ~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 230 HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 356999999999999999999998877654
No 351
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=61.51 E-value=77 Score=27.13 Aligned_cols=100 Identities=13% Similarity=0.086 Sum_probs=53.5
Q ss_pred EEEEEECCCCC-EEEEeeCCCeEEEEECCCCC--CCCeEec---------CCcccEEEEEEeCC---CCcEEEEeeC-C-
Q 024372 105 VRACAFSEDTH-LLLTGGFEKILRIFDLNRPD--APPREVG---------NSSGSIRTVAWLHS---DQTILSSCTD-S- 167 (268)
Q Consensus 105 v~~v~~~~~~~-~l~s~~~d~~i~~~d~~~~~--~~~~~~~---------~~~~~v~~~~~~~~---~~~~~~~~~~-d- 167 (268)
-..++|.|++. .++.+...+.|++++..... .....+. ..++....+++.|+ ++.+.++-+. .
T Consensus 16 P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~~ 95 (463)
T 2wg3_C 16 PVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQE 95 (463)
T ss_dssp EEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECCC
T ss_pred ceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCCC
Confidence 35688999985 33445678999999753211 1111111 11345678888774 3344333221 1
Q ss_pred ----------CeEEEEeCCC----------CceEEeec---CCCCEEEEEECCCCcEEEE
Q 024372 168 ----------GGVRLWDARS----------GKIVQTLE---TKSPVTSAEVSRDGRYITT 204 (268)
Q Consensus 168 ----------~~i~iwd~~~----------~~~~~~~~---~~~~v~~~~~s~~g~~l~~ 204 (268)
..|.-|.+.. .+.+..+. .......++|.|||++.++
T Consensus 96 ~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~ 155 (463)
T 2wg3_C 96 RWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYII 155 (463)
T ss_dssp SSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEE
T ss_pred CcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEE
Confidence 1343355432 12333332 1234789999999987654
No 352
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=59.61 E-value=65 Score=25.68 Aligned_cols=136 Identities=9% Similarity=-0.046 Sum_probs=72.1
Q ss_pred ecCCCcEEEEeeC-C-------------CcEEEEeCCCCCeeeeeccCCeEEEEEECCCCCEEEEee----CCCeEEEEE
Q 024372 69 LDANALFSASGSA-D-------------FTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTGG----FEKILRIFD 130 (268)
Q Consensus 69 ~~~~~~~l~s~s~-D-------------~~v~iw~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~s~~----~d~~i~~~d 130 (268)
+.+++.+++-++. + ..|+..++...+..... .... ..++++++.|+-.. .+..|..-+
T Consensus 60 i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~--~~~~--~~~s~~g~~Iy~~~~~~~~~~~Iy~~~ 135 (302)
T 3s25_A 60 INADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLD--PDPC--IYASLIGNYIYYLHYDTQTATSLYRIR 135 (302)
T ss_dssp EEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEE--CSCE--EEEEEETTEEEEEEESSSSCEEEEEEE
T ss_pred EEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEee--cCCc--cEEEEeCCEEEEEeecCCCCceEEEEE
Confidence 4667777765543 2 35666666555432221 1122 25677788877654 334455556
Q ss_pred CCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEeeCCCeEEEEeCCCCceEEeecCCCCEEEEEECCCCcEEEEe-C--C
Q 024372 131 LNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYITTA-D--G 207 (268)
Q Consensus 131 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~-~--~ 207 (268)
+... ..+.+..+.. ..+.+.++.++-+.....+|..-++..+.....++. ... ..+.|++.+|.-. . +
T Consensus 136 ~dGs--~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~--~~~-~~~~P~g~~iy~t~~~~~ 206 (302)
T 3s25_A 136 IDGE--EKKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYDC--NCY-KPVVLDDTNVYYMDVNRD 206 (302)
T ss_dssp TTSC--CCEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEECS--CEE-EEEEEETTEEEEEEGGGT
T ss_pred CCCC--CeEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeCC--Ccc-ceeeecCCEEEEEEcCCC
Confidence 5532 2333333322 234556777776654456888888876654443332 232 3466888877533 2 2
Q ss_pred CeEEEEeCCC
Q 024372 208 SSVKFWDANH 217 (268)
Q Consensus 208 ~~v~~wd~~~ 217 (268)
..|..-++..
T Consensus 207 ~~I~~~~ldG 216 (302)
T 3s25_A 207 NAIVHVNINN 216 (302)
T ss_dssp TEEEEECSSS
T ss_pred cEEEEEECCC
Confidence 3565556644
No 353
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=59.23 E-value=15 Score=33.51 Aligned_cols=29 Identities=10% Similarity=0.235 Sum_probs=24.7
Q ss_pred CCcEEEEeeCCCcEEEEeCCCCCeeeeec
Q 024372 72 NALFSASGSADFTAKLWDALTGDEKHSFE 100 (268)
Q Consensus 72 ~~~~l~s~s~D~~v~iw~~~~~~~~~~~~ 100 (268)
+..++.+-+.|+++|+|++.+++++.+..
T Consensus 230 ~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 230 HERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp TTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred CCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 46788999999999999999988776654
No 354
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=58.71 E-value=65 Score=25.34 Aligned_cols=181 Identities=15% Similarity=0.062 Sum_probs=93.2
Q ss_pred CeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCC-CCeEEEeeCccCcEEEEEecCCCcEEEEeeCCCcEEEEeCCCC-Ce
Q 024372 18 PVVDLFYSPITPDGFFLVSASKDSSPMLRNGET-GDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTG-DE 95 (268)
Q Consensus 18 ~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~-~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw~~~~~-~~ 95 (268)
.|..++-. ....++. . |+++..|-... +++ ..=..-...|..++.......+++ |+.|+.|-.... +.
T Consensus 64 ~i~~ia~G----~~hs~~l-~-~G~v~~wG~n~~Gql-g~P~~~~~~v~~ia~G~~hs~al~---~G~v~~wG~n~~gql 133 (282)
T 3qhy_B 64 GVDAIAAG----NYHSLAL-K-DGEVIAWGGNEDGQT-TVPAEARSGVDAIAAGAWASYALK---DGKVIAWGDDSDGQT 133 (282)
T ss_dssp CCCEEEEC----SSEEEEE-E-TTEEEEEECCTTSTT-CCCGGGSSSEEEEEEETTEEEEEE---TTEEEEEECCTTSTT
T ss_pred CEEEEEeC----CCEEEEE-E-CCEEEEeeCCCCCCC-CCCcccCCCeEEEECcCCEEEEEe---CCeEEEecCCCCCcC
Confidence 45556553 2334444 4 88888885443 221 100001246777776655444443 899999965442 22
Q ss_pred eeeeccCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEeeCCCeEEEEeC
Q 024372 96 KHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDA 175 (268)
Q Consensus 96 ~~~~~~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~iwd~ 175 (268)
-........|..++...+..+++ . |+.+..|-.+........ ......+..++- ...+.++- ++|.|..|-.
T Consensus 134 g~~~~~~~~i~~i~~G~~~~~~l--~-~G~v~~wG~n~~gqlg~p-~~~~~~v~~i~~--G~~hs~al--~~G~v~~wG~ 205 (282)
T 3qhy_B 134 TVPAEAQSGVTALDGGVYTALAV--K-NGGVIAWGDNYFGQTTVP-AEAQSGVDDVAG--GIFHSLAL--KDGKVIAWGD 205 (282)
T ss_dssp SCCGGGGSSEEEEEECSSEEEEE--E-TTEEEEEECCTTSTTSCC-GGGGSSEEEEEE--CSSEEEEE--ETTEEEEEEC
T ss_pred CCCccCCCCeEEEEcccCEEEEE--E-CCEEEEecCCCCCCCCCc-eecCCCeEEEEe--cCCEEEEE--ECCeEEEEEC
Confidence 11122334577776655543333 3 788988875432211110 111234666653 23344444 3699999976
Q ss_pred CCCceEE-eecCCCCEEEEEECCCCcEEEEeCCCeEEEEeCCCc
Q 024372 176 RSGKIVQ-TLETKSPVTSAEVSRDGRYITTADGSSVKFWDANHF 218 (268)
Q Consensus 176 ~~~~~~~-~~~~~~~v~~~~~s~~g~~l~~~~~~~v~~wd~~~~ 218 (268)
...-++. ..+....+..++...+..++++ ++.|..|=....
T Consensus 206 n~~gqlg~p~~~~~~v~~i~~G~~h~~al~--~g~v~~wG~n~~ 247 (282)
T 3qhy_B 206 NRYKQTTVPTEALSGVSAIASGEWYSLALK--NGKVIAWGSSRT 247 (282)
T ss_dssp CTTSTTCCCGGGGSSCCEEEECSSCEEEEE--TTEEEEESTTCC
T ss_pred CCCCCCCCCcccCCCceEEEcCCCEEEEEE--CCEEEEecCCCC
Confidence 4321111 1111234666666665555445 788888865543
No 355
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=57.90 E-value=90 Score=26.72 Aligned_cols=102 Identities=17% Similarity=0.089 Sum_probs=57.1
Q ss_pred CeeeEEEecCCCCCc-EEEEEeCCCCeEEeeCCCC---CeEEEee---------CccCcEEEEEecCC----CcEEEEee
Q 024372 18 PVVDLFYSPITPDGF-FLVSASKDSSPMLRNGETG---DWIGTFE---------GHKGAVWSCCLDAN----ALFSASGS 80 (268)
Q Consensus 18 ~v~~~~f~~~~~dg~-~l~s~s~d~~i~iw~~~~~---~~~~~~~---------~h~~~V~~~~~~~~----~~~l~s~s 80 (268)
.-++++|.| ||. .|+.+...|.|++++.... +.+..+. +.+.....++++|+ +.+.++-+
T Consensus 15 ~P~~~a~~p---dG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt 91 (463)
T 2wg3_C 15 QPVGALHSG---DGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYT 91 (463)
T ss_dssp SEEEEECCS---SSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEE
T ss_pred CceEEEECC---CCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEe
Confidence 345888875 775 3555778899999864322 1222221 11456888999986 44333322
Q ss_pred --CCC----------cEEEEeCCCC----------Ceeeeec---cCCeEEEEEECCCCCEEEEeeC
Q 024372 81 --ADF----------TAKLWDALTG----------DEKHSFE---HKHIVRACAFSEDTHLLLTGGF 122 (268)
Q Consensus 81 --~D~----------~v~iw~~~~~----------~~~~~~~---~~~~v~~v~~~~~~~~l~s~~~ 122 (268)
.++ .|.-|.+... +.+..+. ..+.-..+.|.||+++.++.+.
T Consensus 92 ~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 92 TNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp ECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECC
T ss_pred CCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCC
Confidence 111 2333555321 1122222 2345678999999988777554
No 356
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=49.66 E-value=1.5e+02 Score=26.83 Aligned_cols=223 Identities=13% Similarity=0.059 Sum_probs=118.1
Q ss_pred CeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEeeCccCcEEEEEecCCCcEEEEeeCCCcEEEEeCCCCCeee
Q 024372 18 PVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEKH 97 (268)
Q Consensus 18 ~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~ 97 (268)
.|.++...+ ++..|-.|+. +-+..++..+++......-....|.++....++.+.+. .. +-+.+++..+.....
T Consensus 192 ~i~~i~~d~---~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWig-T~-~Gl~~~~~~~~~~~~ 265 (758)
T 3ott_A 192 FVNSLLEDT---TRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLAG-TD-NGLYVYHNDTTPLQH 265 (758)
T ss_dssp CEEEEEEET---TTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEEE-ET-TEEEEECCTTSCCEE
T ss_pred eeEEEEEEC---CCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEEE-eC-CceeEEecCCCcEEE
Confidence 366776652 4444444553 34667887776543211112346888888877776543 33 347778876654322
Q ss_pred eec--------cCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCCCCeEec-------CCcccEEEEEEeCCCCcEEE
Q 024372 98 SFE--------HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVG-------NSSGSIRTVAWLHSDQTILS 162 (268)
Q Consensus 98 ~~~--------~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~~~~ 162 (268)
... ....|.++....++.+-+ |+..| +.++... . ...... .....|.++....++ .+-+
T Consensus 266 ~~~~~~~~~~l~~~~i~~i~~D~~g~lWi-GT~~G-l~~~~~~-~--~~~~~~~~~~~~~~~~~~v~~i~~D~~g-~lWi 339 (758)
T 3ott_A 266 IIHDSRNIQSLTNNIIWNIFADQEHNIWL-GTDYG-ISLSRYN-S--ALQFIPISQITGTGDGNQFYSLFRDSKG-FYWF 339 (758)
T ss_dssp ECCCTTCTTSCSCSCEEEEEECTTCCEEE-EESSS-EEEECCC-C---CEEEEHHHHSCSCCCCBEEEEEECTTC-CEEE
T ss_pred EEcCCCCcCcCCcCeEEEEEEcCCCCEEE-EeCCc-ccccccC-C--ceeEEecccCCCCCCCceEEEEEEcCCC-CEEE
Confidence 211 123588888787776544 44456 4444321 1 111110 112357777654444 4444
Q ss_pred EeeCCCeEEEEeCCCCc--eEEeec--------CCCCEEEEEECCCCcEEEEeCCCeEEEEeCCCceeeeEEeC--C---
Q 024372 163 SCTDSGGVRLWDARSGK--IVQTLE--------TKSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGYNM--P--- 227 (268)
Q Consensus 163 ~~~~d~~i~iwd~~~~~--~~~~~~--------~~~~v~~~~~s~~g~~l~~~~~~~v~~wd~~~~~~~~~~~~--~--- 227 (268)
+ +. +.+..++..+++ .+..+. ....|.++...++|++.++.. +.+..+|.++.+. ..+.. .
T Consensus 340 G-t~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~-~GL~~~~~~~~~~-~~~~~~~~~~~ 415 (758)
T 3ott_A 340 G-GA-NGLIRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYEDKEQQLWIATD-GSINRYDYATRQF-IHYNIVDNTGT 415 (758)
T ss_dssp E-ET-TEEEEESCTTSSCCCCEEECTTCSSSCCSCSCEEEEEECTTSCEEEEET-TEEEEEETTTTEE-EEEEEECCC--
T ss_pred e-eC-CcceeecccccccceeEEeccCCcCCCCCCCceEEEEECCCCCEEEEeC-CcHhhcCcCCCcE-EEeecCCCcCC
Confidence 3 45 457777766542 122221 123588999999999887764 5899999876533 22321 1
Q ss_pred --CC-ceeeEEcCCCCCEEEeccCCCeEEEEECC
Q 024372 228 --CN-TESASLEPKLGNIFIAGGEDMWVHVFDFH 258 (268)
Q Consensus 228 --~~-~~~~~~~~~~~~~~~~gs~d~~i~~wd~~ 258 (268)
.. +.++... ....|..|+..+-+.++|.+
T Consensus 416 ~~~~~v~~i~~d--~~g~lWigT~~~Gl~~~~~~ 447 (758)
T 3ott_A 416 YNTNWTYYIFED--TAGQLWISTCLGGIFVVDKH 447 (758)
T ss_dssp CBSSSEEEEEEC--TTSEEEEEESSSCEEEEEHH
T ss_pred CCCceEEEEEEc--CCCCEEEEECCCceEEEccc
Confidence 11 1222222 23345556655457778754
No 357
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=38.12 E-value=2.3e+02 Score=25.61 Aligned_cols=233 Identities=11% Similarity=0.068 Sum_probs=122.0
Q ss_pred CeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCeEEEee-------CccCcEEEEEecCCCcEEEEeeCCCcEEEEeC
Q 024372 18 PVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFE-------GHKGAVWSCCLDANALFSASGSADFTAKLWDA 90 (268)
Q Consensus 18 ~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~~~~~~-------~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw~~ 90 (268)
.|.++.-. .+|.+.+ |+.+ -+.+++..++++..... -....|.++....++.+.+ |...| +.+...
T Consensus 233 ~i~~i~~d---~~g~lWi-gT~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWi-GT~~G-l~~~~~ 305 (758)
T 3ott_A 233 SIKSLALD---GNGDLLA-GTDN-GLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHNIWL-GTDYG-ISLSRY 305 (758)
T ss_dssp EEEEEEEC---TTCCEEE-EETT-EEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCCEEE-EESSS-EEEECC
T ss_pred eEEEEEEc---CCCCEEE-EeCC-ceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCCEEE-EeCCc-cccccc
Confidence 45566554 3565544 5544 46777877665432211 0124588888887776543 33445 444432
Q ss_pred CCCCeeeeec------cCCeEEEEEECCCCCEEEEeeCCCeEEEEECCCCCC-CCeEec-------CCcccEEEEEEeCC
Q 024372 91 LTGDEKHSFE------HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDA-PPREVG-------NSSGSIRTVAWLHS 156 (268)
Q Consensus 91 ~~~~~~~~~~------~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~~~~~-~~~~~~-------~~~~~v~~~~~~~~ 156 (268)
...-...... ....|.++.-..++.+-+. +.+| +..++..++.. ...... .....|.++...++
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWiG-t~~G-l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~ 383 (758)
T 3ott_A 306 NSALQFIPISQITGTGDGNQFYSLFRDSKGFYWFG-GANG-LIRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYEDKE 383 (758)
T ss_dssp CC-CEEEEHHHHSCSCCCCBEEEEEECTTCCEEEE-ETTE-EEEESCTTSSCCCCEEECTTCSSSCCSCSCEEEEEECTT
T ss_pred CCceeEEecccCCCCCCCceEEEEEEcCCCCEEEe-eCCc-ceeecccccccceeEEeccCCcCCCCCCCceEEEEECCC
Confidence 2111111111 1245888877778875543 4444 55565443211 111111 11235777765544
Q ss_pred CCcEEEEeeCCCeEEEEeCCCCceEEee--cC-----CCCEEEEEECCCCcEEEEeCCCeEEEEeCCCc-----eee---
Q 024372 157 DQTILSSCTDSGGVRLWDARSGKIVQTL--ET-----KSPVTSAEVSRDGRYITTADGSSVKFWDANHF-----GLV--- 221 (268)
Q Consensus 157 ~~~~~~~~~~d~~i~iwd~~~~~~~~~~--~~-----~~~v~~~~~s~~g~~l~~~~~~~v~~wd~~~~-----~~~--- 221 (268)
+ .+-+ |+. +.|..+|.++++..+.. .. ...+.++...++|++.+++.++.+.++|.+.. ...
T Consensus 384 g-~lWi-gt~-~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigT~~~Gl~~~~~~~~~~~~~~~~~~~ 460 (758)
T 3ott_A 384 Q-QLWI-ATD-GSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQLWISTCLGGIFVVDKHKLMQSTSGQYIAE 460 (758)
T ss_dssp S-CEEE-EET-TEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEEEEEESSSCEEEEEHHHHHHCCSSEEECS
T ss_pred C-CEEE-EeC-CcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCEEEEECCCceEEEccccccccCCcceecc
Confidence 4 3433 344 67999999887654321 11 23488888899999888876667888885421 111
Q ss_pred eEEeC----CCC-ceeeEEcCCCCCEEEeccCCCeEEEEECCCCcEE
Q 024372 222 KGYNM----PCN-TESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQI 263 (268)
Q Consensus 222 ~~~~~----~~~-~~~~~~~~~~~~~~~~gs~d~~i~~wd~~~g~~~ 263 (268)
..+.. +.. +..+.... .|.+.+.++..+-|..+|.++++..
T Consensus 461 ~~~~~~~~l~~~~i~~i~~d~-~g~lWi~~~t~~Gl~~~d~~~~~~~ 506 (758)
T 3ott_A 461 QNYSVHNGLSGMFINQIIPDN-EGNVWVLLYNNKGIDKINPRTREVT 506 (758)
T ss_dssp EEECGGGTCSCSCEEEEEECT-TSCEEEEETTCSSEEEEETTTTEEE
T ss_pred cccccccccccceeeeEEEcC-CCCEEEEccCCCCcEEEeCCCCceE
Confidence 12221 112 22333333 5776653333344888898776543
No 358
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=37.04 E-value=1.6e+02 Score=26.14 Aligned_cols=57 Identities=14% Similarity=0.124 Sum_probs=37.0
Q ss_pred EEEEEEeCCCCcEEEEeeC-----------CCeEEEEeCCCCceEEeecC--CCCEEEEEECCCCcEEEE
Q 024372 148 IRTVAWLHSDQTILSSCTD-----------SGGVRLWDARSGKIVQTLET--KSPVTSAEVSRDGRYITT 204 (268)
Q Consensus 148 v~~~~~~~~~~~~~~~~~~-----------d~~i~iwd~~~~~~~~~~~~--~~~v~~~~~s~~g~~l~~ 204 (268)
...+.+.+++...+.+-.. .+.|..++..+++....+.. ..+++.++|+||++.|..
T Consensus 478 PDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV 547 (592)
T 4a9v_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFV 547 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEE
T ss_pred CCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEE
Confidence 4567777766544433211 12677778888887665542 356899999999987643
No 359
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=32.99 E-value=2e+02 Score=23.47 Aligned_cols=104 Identities=18% Similarity=0.141 Sum_probs=61.7
Q ss_pred cCCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCCe--EEEe----eCccCcEEEEEecCC----CcEEEE--eeCC
Q 024372 15 HSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDW--IGTF----EGHKGAVWSCCLDAN----ALFSAS--GSAD 82 (268)
Q Consensus 15 h~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~~--~~~~----~~h~~~V~~~~~~~~----~~~l~s--~s~D 82 (268)
.-..-++++|.| ||.++++--..+.|++++...++. +..+ ....+....++++|+ +.+.++ ...+
T Consensus 30 gL~~P~~ia~~p---dG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~ 106 (347)
T 3das_A 30 GLNSPWGLAPLP---GGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASD 106 (347)
T ss_dssp CCSSEEEEEECT---TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSS
T ss_pred CCCCceEEEEcC---CCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCC
Confidence 344567899985 898776554489998887666653 2222 123456789999985 544343 2234
Q ss_pred CcEEEEeCCCCC--------e--ee-eec--cCCeEEEEEECCCCCEEEEee
Q 024372 83 FTAKLWDALTGD--------E--KH-SFE--HKHIVRACAFSEDTHLLLTGG 121 (268)
Q Consensus 83 ~~v~iw~~~~~~--------~--~~-~~~--~~~~v~~v~~~~~~~~l~s~~ 121 (268)
..|.-|....+. . +. .+. ..+.-..+.|.|++.+.++.+
T Consensus 107 ~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 107 NRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp EEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECB
T ss_pred CEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEEC
Confidence 455555554311 1 11 121 123455689999998877754
No 360
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=31.69 E-value=1.9e+02 Score=25.69 Aligned_cols=54 Identities=13% Similarity=0.095 Sum_probs=35.3
Q ss_pred eEEEecCCCCCcEEEEEeCC----------CC--eEEeeCCCCCeEEEeeCcc-CcEEEEEecCCCcEEE
Q 024372 21 DLFYSPITPDGFFLVSASKD----------SS--PMLRNGETGDWIGTFEGHK-GAVWSCCLDANALFSA 77 (268)
Q Consensus 21 ~~~f~~~~~dg~~l~s~s~d----------~~--i~iw~~~~~~~~~~~~~h~-~~V~~~~~~~~~~~l~ 77 (268)
.|.|+| .|.++++--.+ +. +.+.+..++++.+.+.++. ..+..++|+||++.|.
T Consensus 480 NL~fd~---~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlf 546 (592)
T 3zwu_A 480 GLGFDK---AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLF 546 (592)
T ss_dssp EEEECT---TCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEE
T ss_pred ceEECC---CCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEE
Confidence 577774 77765544222 12 2334667788887787765 4788999999987653
No 361
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=31.11 E-value=1.5e+02 Score=26.29 Aligned_cols=58 Identities=10% Similarity=0.126 Sum_probs=31.9
Q ss_pred EEEEECCCCCEEEEeeCC------------CeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEE
Q 024372 106 RACAFSEDTHLLLTGGFE------------KILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSS 163 (268)
Q Consensus 106 ~~v~~~~~~~~l~s~~~d------------~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 163 (268)
--|.|++.|.+++.-..+ +.+-..+..+++...........+++.++|+|++..+++.
T Consensus 479 DNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 479 DGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred cceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 458899999877653322 2233334333332111222345677788888877666554
No 362
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=28.42 E-value=2.2e+02 Score=22.51 Aligned_cols=139 Identities=7% Similarity=-0.042 Sum_probs=67.0
Q ss_pred ECCCCCEEEEeeCC--------------CeEEEEECCCCCCCCeEecCCcccEEEEEEeCCCCcEEEEe---eCCCeEEE
Q 024372 110 FSEDTHLLLTGGFE--------------KILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSC---TDSGGVRL 172 (268)
Q Consensus 110 ~~~~~~~l~s~~~d--------------~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~---~~d~~i~i 172 (268)
+++++.+++-+... ..|+..++...+ ...+... ... .+++.+..++.+. .....|..
T Consensus 60 i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~--~~~l~~~--~~~--~~s~~g~~Iy~~~~~~~~~~~Iy~ 133 (302)
T 3s25_A 60 INADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHG--STVLDPD--PCI--YASLIGNYIYYLHYDTQTATSLYR 133 (302)
T ss_dssp EEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCC--CEEEECS--CEE--EEEEETTEEEEEEESSSSCEEEEE
T ss_pred EEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCc--ceEeecC--Ccc--EEEEeCCEEEEEeecCCCCceEEE
Confidence 46677777665432 356666765432 2233222 222 4456666666554 23346666
Q ss_pred EeCCCCceEEeecCCCCEEEEEECCCCcEEE-EeC-CCeEEEEeCCCceeeeEEeCCCCceeeEEcCCCCCEEEeccCC-
Q 024372 173 WDARSGKIVQTLETKSPVTSAEVSRDGRYIT-TAD-GSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGGED- 249 (268)
Q Consensus 173 wd~~~~~~~~~~~~~~~v~~~~~s~~g~~l~-~~~-~~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~d- 249 (268)
-++...+..+...... ..++|+++.|. ++. ...|..-++........+.. . ....+.|..+.++.+-..+
T Consensus 134 ~~~dGs~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~--~-~~~~~~P~g~~iy~t~~~~~ 206 (302)
T 3s25_A 134 IRIDGEEKKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYDC--N-CYKPVVLDDTNVYYMDVNRD 206 (302)
T ss_dssp EETTSCCCEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEECS--C-EEEEEEEETTEEEEEEGGGT
T ss_pred EECCCCCeEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeCC--C-ccceeeecCCEEEEEEcCCC
Confidence 6776433332223222 34577777665 433 46777777765433222221 1 1222345333333343222
Q ss_pred CeEEEEECCCCc
Q 024372 250 MWVHVFDFHTGE 261 (268)
Q Consensus 250 ~~i~~wd~~~g~ 261 (268)
..|+.-++..++
T Consensus 207 ~~I~~~~ldG~~ 218 (302)
T 3s25_A 207 NAIVHVNINNPN 218 (302)
T ss_dssp TEEEEECSSSCC
T ss_pred cEEEEEECCCCC
Confidence 356666655433
No 363
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=23.87 E-value=3.9e+02 Score=23.78 Aligned_cols=58 Identities=17% Similarity=0.290 Sum_probs=35.5
Q ss_pred CCEEEEEECCCCcEEEEeCCC-------------eEEEEeCCCceeeeEEeCC--CCceeeEEcCCCCCEEEe
Q 024372 188 SPVTSAEVSRDGRYITTADGS-------------SVKFWDANHFGLVKGYNMP--CNTESASLEPKLGNIFIA 245 (268)
Q Consensus 188 ~~v~~~~~s~~g~~l~~~~~~-------------~v~~wd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 245 (268)
.....+.|.++|.+.++.+.. .|...+...+++......+ ..+.-++++|+...+|++
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 347889999999988854421 4666666555544433333 345667788753344444
No 364
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=23.51 E-value=2.9e+02 Score=22.22 Aligned_cols=116 Identities=10% Similarity=-0.026 Sum_probs=66.4
Q ss_pred CCCeeeEEEecCCCCCcEEEEEeCCCCeEEeeCCCCC-------eEEEeeCccCcEEEEEecCCCcEEEEeeCCCcEEEE
Q 024372 16 SRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGD-------WIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLW 88 (268)
Q Consensus 16 ~~~v~~~~f~~~~~dg~~l~s~s~d~~i~iw~~~~~~-------~~~~~~~h~~~V~~~~~~~~~~~l~s~s~D~~v~iw 88 (268)
.+.|.++---+..++..+++.++.+|.++-......+ ..-.++. .+.+..+........++-.+..|.+..+
T Consensus 94 ~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~rf 172 (327)
T 3uc1_A 94 EERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIRF 172 (327)
T ss_dssp TCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEEE
T ss_pred CCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEEE
Confidence 3445444332212346789999999999876544321 1112333 2445444444444556666778888777
Q ss_pred eCC--CCCe---------eeeeccCCeEEEEEECCCCCEEEEeeCCCeEEEEECC
Q 024372 89 DAL--TGDE---------KHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLN 132 (268)
Q Consensus 89 ~~~--~~~~---------~~~~~~~~~v~~v~~~~~~~~l~s~~~d~~i~~~d~~ 132 (268)
... .-.. ...+...+.|..+..-+++..++..+..|.++.-.+.
T Consensus 173 ~~~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~ 227 (327)
T 3uc1_A 173 SATDEALRPMGRATSGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIE 227 (327)
T ss_dssp ECCTTTSCCCCTTSBCEESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGG
T ss_pred ECcccccCcCCcCCCCeeeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHH
Confidence 766 2111 1122344556665555555678888899999887764
No 365
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=21.70 E-value=2.5e+02 Score=24.26 Aligned_cols=70 Identities=9% Similarity=0.016 Sum_probs=42.6
Q ss_pred CeeeEEEecC-CCC--CcEEEEEeCCCCe-EEeeCCCC-----C--eEEEeeC--ccCcEEEEEecCCCcEEEEeeCCCc
Q 024372 18 PVVDLFYSPI-TPD--GFFLVSASKDSSP-MLRNGETG-----D--WIGTFEG--HKGAVWSCCLDANALFSASGSADFT 84 (268)
Q Consensus 18 ~v~~~~f~~~-~~d--g~~l~s~s~d~~i-~iw~~~~~-----~--~~~~~~~--h~~~V~~~~~~~~~~~l~s~s~D~~ 84 (268)
..++|+-... +.| -..+..|+.+|.| ++.....+ + .+.++.- ...+|..+.++++..+|..++.++.
T Consensus 405 ~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V 484 (495)
T 1q47_A 405 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGV 484 (495)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCE
T ss_pred ceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeE
Confidence 4566655432 112 2457889999988 34332221 1 2334432 3468899999999988888887776
Q ss_pred EEE
Q 024372 85 AKL 87 (268)
Q Consensus 85 v~i 87 (268)
++|
T Consensus 485 ~~v 487 (495)
T 1q47_A 485 AQL 487 (495)
T ss_dssp EEE
T ss_pred EEE
Confidence 665
No 366
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=21.26 E-value=3.5e+02 Score=22.39 Aligned_cols=135 Identities=13% Similarity=0.132 Sum_probs=0.0
Q ss_pred eEEEEECCCC--CCCCeEecC-----CcccEEEEEEe---CC----CCcEEEEeeCCCeEEEEeCCCCceEEeecCC---
Q 024372 125 ILRIFDLNRP--DAPPREVGN-----SSGSIRTVAWL---HS----DQTILSSCTDSGGVRLWDARSGKIVQTLETK--- 187 (268)
Q Consensus 125 ~i~~~d~~~~--~~~~~~~~~-----~~~~v~~~~~~---~~----~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~--- 187 (268)
.|-.||+.+. +...+.... .......+.+. +. +....++-...+.|.++|+++++.-+.+...
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p 203 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Q ss_pred ----------------CCEEEEEECCC----CcEEEEeCCCeEEEEeC-----------CCceeeeEEeCCCCceeeEEc
Q 024372 188 ----------------SPVTSAEVSRD----GRYITTADGSSVKFWDA-----------NHFGLVKGYNMPCNTESASLE 236 (268)
Q Consensus 188 ----------------~~v~~~~~s~~----g~~l~~~~~~~v~~wd~-----------~~~~~~~~~~~~~~~~~~~~~ 236 (268)
..+..++++|+ ++.|--+.=..-++|.+ ...+.+-............+.
T Consensus 204 d~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D 283 (381)
T 3q6k_A 204 ERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYD 283 (381)
T ss_dssp CSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEEC
T ss_pred ccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEe
Q ss_pred CCCCCEEEeccCCCeEEEEECCC
Q 024372 237 PKLGNIFIAGGEDMWVHVFDFHT 259 (268)
Q Consensus 237 ~~~~~~~~~gs~d~~i~~wd~~~ 259 (268)
+..|.++++--+...|..|+..+
T Consensus 284 ~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 284 PKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp TTTCEEEEEESSSSEEEEEETTS
T ss_pred CCCCeEEEEeccCCeEEEEeCCC
Done!