Query 024375
Match_columns 268
No_of_seqs 206 out of 1553
Neff 7.4
Searched_HMMs 46136
Date Fri Mar 29 04:05:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024375.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024375hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0546 Gph Predicted phosphat 100.0 2.8E-39 6.1E-44 281.9 19.9 208 1-267 3-217 (220)
2 PRK13226 phosphoglycolate phos 100.0 1.3E-35 2.8E-40 260.1 19.3 206 1-267 11-224 (229)
3 PRK13288 pyrophosphatase PpaX; 100.0 3.8E-34 8.2E-39 247.5 18.1 202 1-267 2-210 (214)
4 TIGR01449 PGP_bact 2-phosphogl 100.0 1.2E-33 2.5E-38 243.3 16.7 206 5-267 1-213 (213)
5 TIGR01422 phosphonatase phosph 100.0 7.6E-33 1.6E-37 245.5 21.2 215 3-267 3-252 (253)
6 TIGR03351 PhnX-like phosphonat 100.0 1.3E-32 2.7E-37 238.6 21.0 207 2-267 1-219 (220)
7 PLN02770 haloacid dehalogenase 100.0 7.8E-33 1.7E-37 245.4 19.6 203 2-263 22-231 (248)
8 PRK13225 phosphoglycolate phos 100.0 1.6E-32 3.5E-37 247.0 20.4 202 2-267 62-267 (273)
9 TIGR01454 AHBA_synth_RP 3-amin 100.0 1.3E-32 2.8E-37 236.4 18.7 196 5-267 1-203 (205)
10 PRK13478 phosphonoacetaldehyde 100.0 4.9E-32 1.1E-36 242.5 21.0 216 2-267 4-254 (267)
11 PRK13223 phosphoglycolate phos 100.0 4.7E-32 1E-36 243.7 20.0 210 1-266 12-228 (272)
12 PLN03243 haloacid dehalogenase 100.0 2E-31 4.3E-36 238.3 19.6 200 3-265 25-232 (260)
13 PRK11587 putative phosphatase; 100.0 1.2E-30 2.6E-35 226.7 18.6 195 2-264 3-204 (218)
14 PLN02575 haloacid dehalogenase 100.0 3.6E-30 7.7E-35 239.8 20.2 199 3-264 132-338 (381)
15 PRK13222 phosphoglycolate phos 100.0 4.2E-30 9E-35 222.9 19.2 209 2-267 6-221 (226)
16 PRK10826 2-deoxyglucose-6-phos 100.0 2.7E-29 5.7E-34 218.5 17.7 204 1-264 6-216 (222)
17 PLN02779 haloacid dehalogenase 100.0 3E-29 6.5E-34 227.1 16.5 218 3-264 41-269 (286)
18 PLN02940 riboflavin kinase 100.0 6.2E-29 1.3E-33 233.4 17.9 199 3-264 12-217 (382)
19 PRK06698 bifunctional 5'-methy 100.0 6.8E-29 1.5E-33 238.3 17.7 207 1-267 240-453 (459)
20 TIGR02253 CTE7 HAD superfamily 100.0 1.9E-28 4.1E-33 212.2 16.9 121 137-263 92-220 (221)
21 PHA02597 30.2 hypothetical pro 100.0 9.4E-29 2E-33 211.2 12.7 187 1-265 1-196 (197)
22 PRK09449 dUMP phosphatase; Pro 100.0 6.6E-28 1.4E-32 209.5 17.9 122 137-268 93-223 (224)
23 TIGR02254 YjjG/YfnB HAD superf 100.0 2.5E-27 5.4E-32 205.0 20.1 121 137-267 95-224 (224)
24 PRK10563 6-phosphogluconate ph 100.0 3.3E-28 7.1E-33 211.2 14.5 203 2-266 4-211 (221)
25 PRK10748 flavin mononucleotide 100.0 1.1E-27 2.3E-32 211.3 16.1 221 3-267 11-238 (238)
26 TIGR01990 bPGM beta-phosphoglu 100.0 1.1E-27 2.3E-32 201.6 15.4 178 4-237 1-185 (185)
27 TIGR02009 PGMB-YQAB-SF beta-ph 100.0 1.6E-27 3.4E-32 200.6 15.8 176 2-236 1-185 (185)
28 PRK10725 fructose-1-P/6-phosph 100.0 1.3E-27 2.7E-32 202.1 14.4 173 3-237 6-186 (188)
29 PLN02919 haloacid dehalogenase 99.9 3.4E-26 7.3E-31 237.7 19.3 202 3-263 76-285 (1057)
30 COG0637 Predicted phosphatase/ 99.9 7.9E-26 1.7E-30 197.6 15.4 205 1-265 1-214 (221)
31 TIGR01993 Pyr-5-nucltdase pyri 99.9 1.3E-25 2.9E-30 189.7 15.1 95 137-236 82-184 (184)
32 PLN02811 hydrolase 99.9 2.5E-25 5.4E-30 193.7 16.6 194 9-264 1-207 (220)
33 TIGR01548 HAD-SF-IA-hyp1 haloa 99.9 1.2E-25 2.5E-30 192.3 13.4 178 3-224 1-196 (197)
34 PRK14988 GMP/IMP nucleotidase; 99.9 1.9E-25 4.1E-30 195.4 14.7 104 136-244 90-201 (224)
35 TIGR02252 DREG-2 REG-2-like, H 99.9 8.3E-25 1.8E-29 187.3 16.1 187 3-235 1-203 (203)
36 TIGR01428 HAD_type_II 2-haloal 99.9 3E-24 6.4E-29 183.3 15.3 97 138-239 91-194 (198)
37 TIGR02247 HAD-1A3-hyp Epoxide 99.9 1.4E-24 3E-29 187.2 9.6 107 137-248 92-207 (211)
38 PF13419 HAD_2: Haloacid dehal 99.9 3.3E-24 7.1E-29 176.5 11.0 95 137-236 75-176 (176)
39 TIGR01672 AphA HAD superfamily 99.9 1.1E-23 2.5E-28 185.5 12.0 100 135-244 110-218 (237)
40 TIGR01549 HAD-SF-IA-v1 haloaci 99.9 3.7E-22 8E-27 163.6 15.7 85 137-224 62-152 (154)
41 PRK09456 ?-D-glucose-1-phospha 99.9 3E-22 6.6E-27 171.5 14.9 106 139-248 84-196 (199)
42 PRK08942 D,D-heptose 1,7-bisph 99.9 2.3E-22 4.9E-27 170.1 13.0 121 139-267 29-176 (181)
43 PLN02954 phosphoserine phospha 99.9 1.4E-21 3.1E-26 169.7 16.9 120 138-267 83-223 (224)
44 TIGR01509 HAD-SF-IA-v3 haloaci 99.9 6E-22 1.3E-26 165.7 12.1 93 138-236 84-183 (183)
45 TIGR01493 HAD-SF-IA-v2 Haloaci 99.9 7.7E-22 1.7E-26 165.0 10.0 82 138-224 89-174 (175)
46 TIGR01685 MDP-1 magnesium-depe 99.8 6.7E-21 1.5E-25 160.6 10.6 105 137-246 43-166 (174)
47 TIGR00338 serB phosphoserine p 99.8 4.6E-20 9.9E-25 159.7 16.2 117 138-267 84-219 (219)
48 COG1011 Predicted hydrolase (H 99.8 2.6E-19 5.5E-24 155.3 19.8 122 138-267 98-226 (229)
49 PRK06769 hypothetical protein; 99.8 1.1E-20 2.3E-25 159.2 9.8 125 138-267 27-171 (173)
50 PRK13582 thrH phosphoserine ph 99.8 7.2E-20 1.6E-24 156.8 14.9 117 137-267 66-195 (205)
51 PRK09552 mtnX 2-hydroxy-3-keto 99.8 6.5E-20 1.4E-24 159.5 11.4 121 137-268 72-213 (219)
52 TIGR00213 GmhB_yaeD D,D-heptos 99.8 9.9E-20 2.1E-24 153.4 11.9 117 138-264 25-175 (176)
53 PRK11009 aphA acid phosphatase 99.8 6.8E-20 1.5E-24 161.5 9.3 98 134-243 109-217 (237)
54 TIGR01491 HAD-SF-IB-PSPlk HAD- 99.8 8E-19 1.7E-23 149.2 14.5 96 137-237 78-190 (201)
55 TIGR01656 Histidinol-ppas hist 99.8 1.3E-19 2.8E-24 148.5 9.1 96 139-239 27-147 (147)
56 TIGR01662 HAD-SF-IIIA HAD-supe 99.8 2.4E-19 5.2E-24 143.7 9.9 94 139-237 25-131 (132)
57 TIGR01458 HAD-SF-IIA-hyp3 HAD- 99.8 1.1E-19 2.4E-24 162.2 7.5 124 139-267 120-254 (257)
58 TIGR01691 enolase-ppase 2,3-di 99.8 2E-17 4.3E-22 144.5 18.2 103 135-242 91-201 (220)
59 KOG2914 Predicted haloacid-hal 99.7 6.9E-17 1.5E-21 140.7 14.8 199 3-265 11-220 (222)
60 TIGR01489 DKMTPPase-SF 2,3-dik 99.7 1.4E-16 3E-21 133.9 14.9 83 138-224 71-180 (188)
61 TIGR01261 hisB_Nterm histidino 99.7 1.8E-17 3.9E-22 138.2 8.8 100 137-243 27-153 (161)
62 PRK05446 imidazole glycerol-ph 99.7 3.3E-16 7.1E-21 145.4 14.0 95 138-239 29-150 (354)
63 PRK11590 hypothetical protein; 99.7 1.5E-15 3.3E-20 131.5 15.8 171 3-224 7-194 (211)
64 PRK10444 UMP phosphatase; Prov 99.7 2.4E-16 5.1E-21 140.2 10.7 72 189-264 174-246 (248)
65 TIGR01668 YqeG_hyp_ppase HAD s 99.7 2E-16 4.4E-21 132.8 9.1 100 138-247 42-146 (170)
66 PHA02530 pseT polynucleotide k 99.7 1.8E-16 3.9E-21 143.7 8.7 98 138-240 186-299 (300)
67 TIGR01452 PGP_euk phosphoglyco 99.7 4.2E-17 9.2E-22 147.1 4.3 120 138-263 142-279 (279)
68 PRK11133 serB phosphoserine ph 99.7 1.4E-15 3E-20 139.9 14.2 91 138-233 180-287 (322)
69 TIGR02137 HSK-PSP phosphoserin 99.6 1.3E-14 2.7E-19 125.4 16.9 114 138-266 67-194 (203)
70 TIGR03333 salvage_mtnX 2-hydro 99.6 2.5E-15 5.5E-20 130.3 12.5 121 138-268 69-209 (214)
71 TIGR01457 HAD-SF-IIA-hyp2 HAD- 99.6 6.8E-16 1.5E-20 137.2 6.8 120 138-263 120-249 (249)
72 TIGR01490 HAD-SF-IB-hyp1 HAD-s 99.6 2.4E-14 5.3E-19 122.2 15.7 112 109-234 66-195 (202)
73 TIGR01664 DNA-3'-Pase DNA 3'-p 99.6 2.5E-15 5.5E-20 125.8 7.5 90 139-235 42-160 (166)
74 PF00702 Hydrolase: haloacid d 99.6 1.9E-14 4E-19 123.0 10.3 84 137-224 125-213 (215)
75 TIGR01681 HAD-SF-IIIC HAD-supe 99.6 5.5E-15 1.2E-19 118.5 6.3 85 139-224 29-126 (128)
76 TIGR01488 HAD-SF-IB Haloacid D 99.5 2.3E-14 5.1E-19 119.4 8.9 86 138-224 72-176 (177)
77 KOG3085 Predicted hydrolase (H 99.5 6.3E-14 1.4E-18 122.9 11.2 95 138-238 112-214 (237)
78 PF13242 Hydrolase_like: HAD-h 99.5 1.5E-14 3.3E-19 105.3 6.0 71 189-263 4-75 (75)
79 smart00577 CPDc catalytic doma 99.5 7.3E-15 1.6E-19 120.6 4.8 91 137-233 43-138 (148)
80 PLN02645 phosphoglycolate phos 99.5 8E-15 1.7E-19 134.3 5.2 111 152-267 186-307 (311)
81 TIGR01670 YrbI-phosphatas 3-de 99.5 7.1E-14 1.5E-18 115.5 7.6 102 144-262 36-137 (154)
82 COG0560 SerB Phosphoserine pho 99.5 2.8E-12 6.1E-17 111.5 16.4 86 138-224 76-178 (212)
83 TIGR01663 PNK-3'Pase polynucle 99.4 4.6E-13 1E-17 130.1 9.7 84 140-226 198-304 (526)
84 PRK10530 pyridoxal phosphate ( 99.4 1.8E-12 3.8E-17 115.5 11.0 109 140-260 138-258 (272)
85 PRK09484 3-deoxy-D-manno-octul 99.4 1.6E-12 3.4E-17 110.5 9.9 104 146-266 58-167 (183)
86 TIGR02726 phenyl_P_delta pheny 99.4 6.7E-13 1.5E-17 111.5 7.1 73 146-224 44-116 (169)
87 cd01427 HAD_like Haloacid deha 99.4 3.5E-12 7.5E-17 99.9 9.5 95 137-236 22-139 (139)
88 PRK08238 hypothetical protein; 99.4 3.6E-11 7.8E-16 116.1 17.3 108 139-261 72-188 (479)
89 TIGR01545 YfhB_g-proteo haloac 99.3 4.8E-11 1E-15 103.6 16.2 103 109-224 72-193 (210)
90 TIGR01686 FkbH FkbH-like domai 99.3 4.1E-12 8.9E-17 116.9 8.3 86 138-225 30-122 (320)
91 COG0647 NagD Predicted sugar p 99.3 4.4E-11 9.5E-16 107.2 14.3 120 137-267 131-265 (269)
92 PF06888 Put_Phosphatase: Puta 99.3 2E-10 4.3E-15 101.1 15.3 108 137-248 69-208 (234)
93 KOG3109 Haloacid dehalogenase- 99.3 2.3E-10 5E-15 98.3 14.7 97 138-239 99-207 (244)
94 TIGR01512 ATPase-IB2_Cd heavy 99.2 3E-11 6.6E-16 118.4 10.7 116 134-267 357-478 (536)
95 TIGR01459 HAD-SF-IIA-hyp4 HAD- 99.2 3.2E-12 6.9E-17 112.9 3.0 92 140-237 139-241 (242)
96 TIGR01525 ATPase-IB_hvy heavy 99.2 3.7E-11 7.9E-16 118.3 10.3 114 135-267 380-499 (556)
97 PRK00192 mannosyl-3-phosphogly 99.1 3.4E-10 7.3E-15 101.7 9.4 72 150-224 146-225 (273)
98 TIGR01533 lipo_e_P4 5'-nucleot 99.1 1.7E-09 3.7E-14 97.0 13.5 82 137-223 116-205 (266)
99 TIGR02244 HAD-IG-Ncltidse HAD 99.1 3.7E-10 8.1E-15 104.5 9.4 99 136-238 181-324 (343)
100 COG2179 Predicted hydrolase of 99.1 5.1E-10 1.1E-14 92.5 8.6 88 140-237 47-138 (175)
101 PF12710 HAD: haloacid dehalog 99.1 1.3E-09 2.8E-14 91.6 11.0 78 142-223 92-192 (192)
102 TIGR01511 ATPase-IB1_Cu copper 99.0 1.9E-09 4.1E-14 106.4 11.4 110 137-267 403-518 (562)
103 COG0241 HisB Histidinol phosph 99.0 2.9E-09 6.4E-14 90.0 10.1 116 139-264 31-173 (181)
104 TIGR01544 HAD-SF-IE haloacid d 99.0 1.6E-08 3.5E-13 91.0 14.2 115 95-224 91-229 (277)
105 PRK01158 phosphoglycolate phos 99.0 4.2E-09 9.2E-14 91.5 10.1 92 154-259 117-215 (230)
106 PRK10671 copA copper exporting 99.0 2.3E-09 5E-14 110.3 9.4 114 137-267 648-764 (834)
107 TIGR02463 MPGP_rel mannosyl-3- 98.9 2.2E-08 4.8E-13 86.7 12.0 77 151-233 137-218 (221)
108 TIGR01459 HAD-SF-IIA-hyp4 HAD- 98.9 3.9E-09 8.5E-14 93.2 6.5 87 136-224 21-113 (242)
109 TIGR01482 SPP-subfamily Sucros 98.8 2.9E-08 6.3E-13 85.9 9.1 69 153-224 108-183 (225)
110 TIGR02251 HIF-SF_euk Dullard-l 98.8 4.2E-09 9.1E-14 87.8 3.7 92 139-236 42-138 (162)
111 KOG3120 Predicted haloacid deh 98.8 5.5E-08 1.2E-12 83.8 9.6 101 138-242 83-215 (256)
112 TIGR01522 ATPase-IIA2_Ca golgi 98.7 8.7E-08 1.9E-12 99.3 9.9 119 138-267 527-670 (884)
113 TIGR01487 SPP-like sucrose-pho 98.6 1.2E-07 2.5E-12 82.0 7.6 95 153-259 108-205 (215)
114 PF12689 Acid_PPase: Acid Phos 98.6 2.7E-07 5.9E-12 77.4 8.4 101 136-242 42-156 (169)
115 KOG1615 Phosphoserine phosphat 98.5 2.4E-06 5.1E-11 72.6 12.9 85 137-224 86-191 (227)
116 PF06941 NT5C: 5' nucleotidase 98.5 1.7E-07 3.7E-12 79.9 6.0 105 135-265 69-183 (191)
117 PRK11033 zntA zinc/cadmium/mer 98.5 5.5E-07 1.2E-11 91.7 9.8 111 137-266 566-679 (741)
118 TIGR01460 HAD-SF-IIA Haloacid 98.5 1.9E-07 4.1E-12 82.3 5.2 85 150-239 142-236 (236)
119 TIGR01456 CECR5 HAD-superfamil 98.5 2.3E-07 4.9E-12 85.6 5.8 74 189-267 233-320 (321)
120 KOG2882 p-Nitrophenyl phosphat 98.4 2.3E-06 5E-11 77.1 10.9 123 139-267 165-303 (306)
121 PRK10976 putative hydrolase; P 98.4 1.8E-06 3.9E-11 76.9 10.2 52 190-249 190-241 (266)
122 COG4359 Uncharacterized conser 98.3 8.1E-06 1.8E-10 68.8 11.0 82 138-224 72-177 (220)
123 PRK10513 sugar phosphate phosp 98.3 4.5E-06 9.9E-11 74.3 10.3 52 190-249 196-247 (270)
124 PRK15126 thiamin pyrimidine py 98.3 7E-06 1.5E-10 73.4 10.6 35 190-224 188-222 (272)
125 TIGR00099 Cof-subfamily Cof su 98.3 9.3E-06 2E-10 71.9 11.2 59 190-259 188-246 (256)
126 TIGR02250 FCP1_euk FCP1-like p 98.3 2.1E-06 4.5E-11 71.3 6.4 82 136-221 55-142 (156)
127 TIGR02461 osmo_MPG_phos mannos 98.2 5.5E-06 1.2E-10 72.6 8.8 40 190-233 181-222 (225)
128 PLN02645 phosphoglycolate phos 98.2 5.9E-06 1.3E-10 75.8 8.9 88 138-235 43-136 (311)
129 COG0561 Cof Predicted hydrolas 98.2 5.9E-06 1.3E-10 73.5 8.7 52 190-249 189-240 (264)
130 PF08645 PNK3P: Polynucleotide 98.2 3.2E-06 7E-11 70.3 6.5 88 139-233 29-152 (159)
131 PRK03669 mannosyl-3-phosphogly 98.2 1.1E-05 2.4E-10 72.3 10.4 65 190-261 187-256 (271)
132 PLN02887 hydrolase family prot 98.1 4.7E-05 1E-09 75.5 13.5 52 190-249 507-558 (580)
133 TIGR01116 ATPase-IIA1_Ca sarco 98.1 2.4E-05 5.2E-10 81.6 10.8 114 138-265 536-680 (917)
134 TIGR01486 HAD-SF-IIB-MPGP mann 98.0 3.1E-05 6.8E-10 68.7 9.7 36 190-225 176-213 (256)
135 PF09419 PGP_phosphatase: Mito 98.0 5.5E-05 1.2E-09 63.4 9.2 92 138-240 58-167 (168)
136 COG1778 Low specificity phosph 98.0 9.9E-06 2.2E-10 66.6 4.4 79 145-233 44-122 (170)
137 PTZ00445 p36-lilke protein; Pr 97.9 2.6E-05 5.7E-10 67.4 7.1 93 140-237 76-205 (219)
138 smart00775 LNS2 LNS2 domain. T 97.9 0.00016 3.4E-09 60.0 11.4 87 141-232 29-141 (157)
139 COG4229 Predicted enolase-phos 97.8 0.0002 4.3E-09 60.5 10.3 104 126-237 91-204 (229)
140 TIGR01684 viral_ppase viral ph 97.7 4.7E-05 1E-09 69.1 5.5 45 142-187 149-196 (301)
141 COG4996 Predicted phosphatase 97.7 7.2E-05 1.6E-09 59.8 5.6 87 137-224 39-134 (164)
142 TIGR01675 plant-AP plant acid 97.7 0.00017 3.8E-09 63.4 8.3 81 137-223 118-213 (229)
143 COG4087 Soluble P-type ATPase 97.7 0.0004 8.7E-09 55.6 9.3 115 137-267 28-146 (152)
144 PF03767 Acid_phosphat_B: HAD 97.6 4.8E-05 1E-09 67.0 4.0 80 139-223 115-209 (229)
145 PLN02177 glycerol-3-phosphate 97.6 0.0027 5.8E-08 62.1 15.4 101 109-224 89-206 (497)
146 PHA03398 viral phosphatase sup 97.5 0.00013 2.9E-09 66.2 5.6 46 141-187 150-198 (303)
147 TIGR00685 T6PP trehalose-phosp 97.5 0.00016 3.5E-09 63.9 5.4 70 190-267 167-239 (244)
148 KOG3040 Predicted sugar phosph 97.5 8.4E-05 1.8E-09 64.0 3.4 71 189-263 181-252 (262)
149 PLN02423 phosphomannomutase 97.3 0.0011 2.3E-08 58.8 8.4 39 190-237 189-231 (245)
150 PRK14502 bifunctional mannosyl 97.3 0.0021 4.5E-08 64.6 11.0 41 190-234 613-655 (694)
151 PF05116 S6PP: Sucrose-6F-phos 97.2 0.003 6.4E-08 56.1 10.1 48 190-244 165-212 (247)
152 TIGR01485 SPP_plant-cyano sucr 97.1 0.0023 5E-08 56.5 8.7 89 150-248 117-218 (249)
153 TIGR02471 sucr_syn_bact_C sucr 97.1 0.0007 1.5E-08 59.2 4.9 98 151-259 111-221 (236)
154 PRK12702 mannosyl-3-phosphogly 97.1 0.0039 8.5E-08 56.8 9.7 120 107-235 95-251 (302)
155 COG2217 ZntA Cation transport 97.1 0.0027 5.9E-08 64.4 9.6 109 138-265 536-649 (713)
156 PF05761 5_nucleotid: 5' nucle 97.0 0.002 4.3E-08 62.1 7.6 94 141-237 185-324 (448)
157 TIGR01680 Veg_Stor_Prot vegeta 97.0 0.008 1.7E-07 54.1 10.8 80 137-222 143-238 (275)
158 TIGR01497 kdpB K+-transporting 97.0 0.0036 7.7E-08 63.3 9.3 101 139-259 446-550 (675)
159 PRK14010 potassium-transportin 96.9 0.0068 1.5E-07 61.3 10.4 101 139-258 441-544 (673)
160 PRK01122 potassium-transportin 96.8 0.0065 1.4E-07 61.5 9.6 105 139-263 445-555 (679)
161 PF11019 DUF2608: Protein of u 96.7 0.0095 2.1E-07 53.2 8.5 121 142-266 87-235 (252)
162 TIGR01484 HAD-SF-IIB HAD-super 96.6 0.0022 4.7E-08 54.6 3.8 40 190-233 163-202 (204)
163 PF13344 Hydrolase_6: Haloacid 96.1 0.012 2.6E-07 45.0 5.2 80 137-224 12-97 (101)
164 TIGR01452 PGP_euk phosphoglyco 96.1 0.035 7.7E-07 49.9 8.8 72 138-215 17-94 (279)
165 TIGR01524 ATPase-IIIB_Mg magne 96.0 0.033 7.1E-07 58.2 9.5 105 138-259 514-644 (867)
166 TIGR01517 ATPase-IIB_Ca plasma 96.0 0.046 9.9E-07 57.6 10.2 113 138-265 578-719 (941)
167 TIGR01523 ATPase-IID_K-Na pota 95.9 0.044 9.5E-07 58.4 10.1 112 138-264 645-795 (1053)
168 PTZ00174 phosphomannomutase; P 95.9 0.0046 1E-07 54.7 2.4 40 190-237 188-231 (247)
169 TIGR01647 ATPase-IIIA_H plasma 95.9 0.043 9.3E-07 56.4 9.7 106 138-259 441-576 (755)
170 PRK15122 magnesium-transportin 95.9 0.046 9.9E-07 57.3 9.9 105 138-259 549-679 (903)
171 PRK10517 magnesium-transportin 95.8 0.048 1E-06 57.1 9.6 105 138-259 549-679 (902)
172 COG3700 AphA Acid phosphatase 95.6 0.033 7E-07 47.2 5.9 97 132-234 107-211 (237)
173 TIGR02471 sucr_syn_bact_C sucr 95.4 0.061 1.3E-06 46.9 7.5 33 151-185 29-61 (236)
174 KOG0207 Cation transport ATPas 95.0 0.14 2.9E-06 52.9 9.4 102 139-260 723-828 (951)
175 PF03031 NIF: NLI interacting 95.0 0.011 2.4E-07 48.4 1.4 80 139-221 36-121 (159)
176 PLN02499 glycerol-3-phosphate 94.9 0.41 8.8E-06 46.7 11.9 65 109-187 75-139 (498)
177 TIGR01106 ATPase-IIC_X-K sodiu 94.9 0.19 4.2E-06 53.3 10.6 112 138-264 567-733 (997)
178 TIGR01652 ATPase-Plipid phosph 94.7 0.14 3.1E-06 54.6 9.2 39 138-177 630-671 (1057)
179 COG5663 Uncharacterized conser 94.6 0.089 1.9E-06 44.1 5.8 87 142-243 75-167 (194)
180 PF08282 Hydrolase_3: haloacid 94.6 0.033 7.1E-07 47.8 3.5 52 190-249 186-237 (254)
181 TIGR01689 EcbF-BcbF capsule bi 94.4 0.024 5.3E-07 45.3 1.9 15 2-16 1-15 (126)
182 COG2503 Predicted secreted aci 94.3 0.2 4.4E-06 44.3 7.6 82 137-223 120-210 (274)
183 COG0647 NagD Predicted sugar p 94.3 0.15 3.3E-06 46.0 7.0 52 136-187 21-78 (269)
184 TIGR01494 ATPase_P-type ATPase 94.1 0.19 4.2E-06 48.9 8.0 75 138-224 346-424 (499)
185 TIGR01681 HAD-SF-IIIC HAD-supe 93.8 0.07 1.5E-06 42.4 3.5 14 3-16 1-14 (128)
186 PF08282 Hydrolase_3: haloacid 93.7 0.034 7.3E-07 47.7 1.7 27 5-31 1-27 (254)
187 KOG2630 Enolase-phosphatase E- 93.5 0.46 1E-05 41.8 8.3 103 126-236 111-223 (254)
188 TIGR01484 HAD-SF-IIB HAD-super 93.3 0.045 9.8E-07 46.4 1.8 28 4-31 1-29 (204)
189 TIGR01456 CECR5 HAD-superfamil 93.1 0.07 1.5E-06 49.2 2.7 27 4-31 2-28 (321)
190 cd01427 HAD_like Haloacid deha 92.7 0.048 1E-06 41.8 0.9 15 4-18 1-15 (139)
191 cd04728 ThiG Thiazole synthase 92.6 1.8 4E-05 38.5 10.7 96 137-242 102-209 (248)
192 PRK10187 trehalose-6-phosphate 92.5 0.24 5.3E-06 44.4 5.4 67 190-267 174-240 (266)
193 TIGR01684 viral_ppase viral ph 92.5 0.093 2E-06 47.9 2.6 29 3-31 127-158 (301)
194 PLN03190 aminophospholipid tra 92.4 0.45 9.7E-06 51.4 8.1 34 138-171 725-761 (1178)
195 PRK00192 mannosyl-3-phosphogly 92.3 0.26 5.5E-06 44.1 5.3 47 139-186 21-70 (273)
196 PF03031 NIF: NLI interacting 92.0 0.066 1.4E-06 43.8 0.9 16 3-18 1-16 (159)
197 COG4030 Uncharacterized protei 92.0 0.9 2E-05 40.1 7.9 59 102-176 61-121 (315)
198 PRK09484 3-deoxy-D-manno-octul 91.9 0.08 1.7E-06 44.7 1.5 15 2-16 21-35 (183)
199 PHA03398 viral phosphatase sup 91.7 0.12 2.6E-06 47.2 2.5 30 2-31 128-160 (303)
200 TIGR01457 HAD-SF-IIA-hyp2 HAD- 91.6 0.33 7.1E-06 43.0 5.1 48 138-186 16-69 (249)
201 PLN02382 probable sucrose-phos 91.6 0.29 6.2E-06 46.9 5.0 52 190-248 175-229 (413)
202 TIGR01664 DNA-3'-Pase DNA 3'-p 91.2 0.12 2.5E-06 43.2 1.6 17 2-18 13-29 (166)
203 COG0474 MgtA Cation transport 91.1 1 2.2E-05 47.5 8.8 91 138-240 546-665 (917)
204 TIGR01670 YrbI-phosphatas 3-de 90.6 0.12 2.7E-06 42.2 1.3 14 3-16 2-15 (154)
205 PRK00208 thiG thiazole synthas 90.5 10 0.00022 33.8 13.3 95 138-242 103-209 (250)
206 PRK10187 trehalose-6-phosphate 90.5 0.17 3.6E-06 45.4 2.2 46 164-215 177-222 (266)
207 KOG0206 P-type ATPase [General 90.4 1.3 2.9E-05 47.3 9.0 38 138-176 650-690 (1151)
208 TIGR01458 HAD-SF-IIA-hyp3 HAD- 89.8 0.33 7.1E-06 43.3 3.4 47 139-186 21-73 (257)
209 PRK10444 UMP phosphatase; Prov 89.7 0.84 1.8E-05 40.5 5.9 47 139-186 17-69 (248)
210 TIGR01657 P-ATPase-V P-type AT 88.5 2.4 5.1E-05 45.5 9.2 39 138-177 655-696 (1054)
211 TIGR00685 T6PP trehalose-phosp 88.3 0.24 5.2E-06 43.6 1.4 33 164-198 170-202 (244)
212 PF08645 PNK3P: Polynucleotide 88.2 0.24 5.1E-06 41.1 1.3 16 3-18 1-16 (159)
213 TIGR01658 EYA-cons_domain eyes 87.9 2.9 6.3E-05 37.3 7.8 81 153-239 177-259 (274)
214 TIGR01460 HAD-SF-IIA Haloacid 87.9 2.3 4.9E-05 37.3 7.4 49 138-186 13-67 (236)
215 COG2216 KdpB High-affinity K+ 86.8 1.7 3.7E-05 42.7 6.3 107 139-258 447-559 (681)
216 smart00577 CPDc catalytic doma 86.5 0.41 8.8E-06 38.9 1.7 17 2-18 2-18 (148)
217 KOG2470 Similar to IMP-GMP spe 86.5 0.68 1.5E-05 43.3 3.3 69 150-218 254-358 (510)
218 PF06189 5-nucleotidase: 5'-nu 86.3 1.5 3.3E-05 39.3 5.3 76 151-242 185-263 (264)
219 PF13344 Hydrolase_6: Haloacid 85.9 0.4 8.7E-06 36.5 1.3 19 5-23 1-19 (101)
220 TIGR02245 HAD_IIID1 HAD-superf 85.7 3.1 6.7E-05 35.8 6.8 91 142-239 48-156 (195)
221 KOG0202 Ca2+ transporting ATPa 85.5 2.8 6E-05 43.4 7.3 99 139-249 584-713 (972)
222 PF12689 Acid_PPase: Acid Phos 85.4 0.47 1E-05 39.8 1.6 16 2-17 3-18 (169)
223 TIGR02726 phenyl_P_delta pheny 85.1 0.44 9.4E-06 40.0 1.3 15 3-17 8-22 (169)
224 PF05822 UMPH-1: Pyrimidine 5' 83.1 11 0.00024 33.6 9.3 151 95-263 60-235 (246)
225 PLN03017 trehalose-phosphatase 82.7 0.84 1.8E-05 43.0 2.2 70 190-267 283-355 (366)
226 TIGR02245 HAD_IIID1 HAD-superf 82.5 0.73 1.6E-05 39.6 1.6 15 3-17 22-36 (195)
227 PLN02151 trehalose-phosphatase 82.0 0.9 2E-05 42.6 2.1 69 190-267 269-341 (354)
228 COG1778 Low specificity phosph 81.9 0.79 1.7E-05 38.1 1.5 18 1-18 7-24 (170)
229 TIGR00213 GmhB_yaeD D,D-heptos 81.4 0.79 1.7E-05 38.1 1.4 14 3-16 2-15 (176)
230 COG1877 OtsB Trehalose-6-phosp 81.4 0.81 1.7E-05 41.3 1.5 99 139-242 122-231 (266)
231 KOG2469 IMP-GMP specific 5'-nu 81.1 3.2 6.8E-05 39.5 5.3 84 150-236 212-332 (424)
232 COG3882 FkbH Predicted enzyme 80.7 6.6 0.00014 38.4 7.4 69 150-224 269-345 (574)
233 PRK14501 putative bifunctional 80.6 0.97 2.1E-05 46.3 2.0 64 190-267 657-720 (726)
234 PRK11840 bifunctional sulfur c 80.4 20 0.00044 33.2 10.3 121 111-241 148-282 (326)
235 TIGR01261 hisB_Nterm histidino 79.4 1.1 2.3E-05 37.1 1.5 16 3-18 2-17 (161)
236 PF02358 Trehalose_PPase: Treh 79.3 1.5 3.3E-05 38.2 2.5 35 190-224 165-202 (235)
237 PLN02205 alpha,alpha-trehalose 79.2 1.9 4E-05 45.2 3.5 70 190-267 762-841 (854)
238 TIGR02251 HIF-SF_euk Dullard-l 79.0 1.2 2.5E-05 36.9 1.6 16 3-18 2-17 (162)
239 TIGR02463 MPGP_rel mannosyl-3- 79.0 3.9 8.4E-05 34.9 5.0 35 142-177 19-56 (221)
240 PLN02580 trehalose-phosphatase 77.8 1.2 2.6E-05 42.3 1.5 69 190-267 301-373 (384)
241 TIGR02461 osmo_MPG_phos mannos 76.3 5.4 0.00012 34.7 5.1 40 139-179 15-57 (225)
242 KOG2134 Polynucleotide kinase 75.7 1.4 3.1E-05 41.6 1.3 19 3-21 76-94 (422)
243 CHL00162 thiG thiamin biosynth 75.1 35 0.00076 30.7 9.8 95 137-241 116-222 (267)
244 PRK14501 putative bifunctional 74.9 5.4 0.00012 40.9 5.5 13 3-15 493-505 (726)
245 PTZ00174 phosphomannomutase; P 74.7 4.7 0.0001 35.4 4.4 29 3-31 6-34 (247)
246 PRK12702 mannosyl-3-phosphogly 73.2 7.1 0.00015 35.8 5.2 41 138-179 17-60 (302)
247 COG4996 Predicted phosphatase 72.8 1.9 4.2E-05 34.8 1.3 16 3-18 1-16 (164)
248 PRK10513 sugar phosphate phosp 72.7 10 0.00022 33.3 6.1 40 139-179 20-62 (270)
249 COG4850 Uncharacterized conser 70.7 19 0.0004 33.6 7.2 81 138-221 195-293 (373)
250 PRK06769 hypothetical protein; 70.4 2.5 5.5E-05 35.1 1.6 13 2-14 4-16 (173)
251 PF05152 DUF705: Protein of un 69.0 11 0.00024 34.3 5.4 47 140-187 143-192 (297)
252 TIGR01487 SPP-like sucrose-pho 68.1 9.5 0.00021 32.4 4.7 40 139-179 18-60 (215)
253 PLN02580 trehalose-phosphatase 67.9 13 0.00028 35.3 5.9 38 160-200 301-341 (384)
254 PF09419 PGP_phosphatase: Mito 66.5 8.1 0.00018 32.4 3.8 27 2-28 41-72 (168)
255 TIGR03609 S_layer_CsaB polysac 65.4 53 0.0012 29.3 9.3 74 150-240 203-279 (298)
256 TIGR02250 FCP1_euk FCP1-like p 64.7 4 8.7E-05 33.6 1.6 19 3-21 7-25 (156)
257 TIGR01668 YqeG_hyp_ppase HAD s 64.3 4.9 0.00011 33.3 2.1 14 3-16 26-39 (170)
258 PRK01158 phosphoglycolate phos 64.0 14 0.00031 31.4 5.1 40 139-179 20-62 (230)
259 PF06014 DUF910: Bacterial pro 63.5 5 0.00011 28.0 1.6 25 195-223 7-31 (62)
260 COG0761 lytB 4-Hydroxy-3-methy 62.0 45 0.00097 30.5 7.8 81 154-247 194-274 (294)
261 TIGR01485 SPP_plant-cyano sucr 61.6 15 0.00033 32.0 4.9 42 142-185 24-68 (249)
262 COG3769 Predicted hydrolase (H 61.4 4.8 0.0001 35.5 1.5 71 150-222 146-225 (274)
263 TIGR00099 Cof-subfamily Cof su 61.0 18 0.00039 31.6 5.2 40 139-179 16-58 (256)
264 COG5610 Predicted hydrolase (H 60.7 35 0.00075 33.4 7.2 96 136-236 94-201 (635)
265 PRK15126 thiamin pyrimidine py 60.3 17 0.00036 32.1 5.0 40 139-179 19-61 (272)
266 KOG2882 p-Nitrophenyl phosphat 59.9 13 0.00028 34.1 4.1 43 134-177 34-81 (306)
267 KOG3107 Predicted haloacid deh 59.6 41 0.00089 32.0 7.3 79 152-237 370-451 (468)
268 COG0561 Cof Predicted hydrolas 59.5 18 0.00038 31.8 4.9 40 139-179 20-62 (264)
269 PF08235 LNS2: LNS2 (Lipin/Ned 59.1 44 0.00096 27.7 6.8 88 140-232 28-141 (157)
270 TIGR01486 HAD-SF-IIB-MPGP mann 59.1 17 0.00037 31.9 4.7 36 142-178 19-57 (256)
271 PRK10530 pyridoxal phosphate ( 58.9 20 0.00044 31.3 5.2 40 139-179 20-62 (272)
272 KOG0323 TFIIF-interacting CTD 58.8 18 0.00039 36.6 5.3 51 137-188 199-253 (635)
273 PLN03064 alpha,alpha-trehalose 58.7 5 0.00011 42.4 1.4 15 3-17 592-606 (934)
274 PLN02382 probable sucrose-phos 58.4 5.4 0.00012 38.2 1.5 48 165-221 179-229 (413)
275 KOG2961 Predicted hydrolase (H 58.4 10 0.00022 31.5 2.9 48 191-242 123-172 (190)
276 PF06117 DUF957: Enterobacteri 58.2 14 0.0003 25.8 3.1 30 1-31 23-52 (65)
277 PLN03063 alpha,alpha-trehalose 57.9 5 0.00011 41.7 1.3 70 190-267 678-780 (797)
278 TIGR01482 SPP-subfamily Sucros 56.7 23 0.0005 30.0 5.1 39 139-178 15-56 (225)
279 TIGR01686 FkbH FkbH-like domai 56.0 6.8 0.00015 35.9 1.7 16 2-17 3-18 (320)
280 KOG0203 Na+/K+ ATPase, alpha s 54.5 46 0.001 34.9 7.3 102 140-249 591-741 (1019)
281 PLN02205 alpha,alpha-trehalose 53.6 26 0.00055 36.9 5.6 17 1-17 595-611 (854)
282 PRK10976 putative hydrolase; P 53.4 24 0.00052 30.9 4.7 40 139-179 19-61 (266)
283 PRK03669 mannosyl-3-phosphogly 53.2 29 0.00063 30.7 5.3 38 139-177 24-64 (271)
284 PF05690 ThiG: Thiazole biosyn 52.6 69 0.0015 28.5 7.3 93 137-239 102-206 (247)
285 PF04413 Glycos_transf_N: 3-De 52.2 34 0.00074 28.9 5.3 78 134-219 100-184 (186)
286 KOG0204 Calcium transporting A 52.1 1E+02 0.0022 32.6 9.3 107 139-259 647-781 (1034)
287 PRK00994 F420-dependent methyl 51.4 86 0.0019 28.0 7.6 65 150-217 29-98 (277)
288 KOG3128 Uncharacterized conser 49.9 2E+02 0.0043 26.1 10.1 134 108-258 121-279 (298)
289 TIGR02329 propionate_PrpR prop 48.2 75 0.0016 31.5 7.7 83 144-239 86-172 (526)
290 PRK15424 propionate catabolism 46.7 1E+02 0.0022 30.8 8.3 81 144-237 96-180 (538)
291 TIGR01689 EcbF-BcbF capsule bi 46.0 56 0.0012 26.0 5.3 47 138-186 23-87 (126)
292 COG4502 5'(3')-deoxyribonucleo 45.7 8.4 0.00018 31.6 0.5 69 138-223 67-144 (180)
293 COG0731 Fe-S oxidoreductases [ 44.9 52 0.0011 30.2 5.5 42 136-184 89-134 (296)
294 PF03808 Glyco_tran_WecB: Glyc 43.8 44 0.00096 27.7 4.6 51 192-242 34-86 (172)
295 PF08235 LNS2: LNS2 (Lipin/Ned 43.7 12 0.00027 31.0 1.2 55 157-215 94-151 (157)
296 KOG4549 Magnesium-dependent ph 43.6 1E+02 0.0022 24.9 6.3 78 137-217 42-133 (144)
297 TIGR00236 wecB UDP-N-acetylglu 42.8 1.1E+02 0.0024 28.0 7.6 85 155-241 32-121 (365)
298 KOG3040 Predicted sugar phosph 42.6 77 0.0017 27.9 5.9 45 140-185 24-74 (262)
299 COG0241 HisB Histidinol phosph 40.1 15 0.00033 31.2 1.2 19 3-21 6-24 (181)
300 KOG2134 Polynucleotide kinase 39.9 48 0.001 31.6 4.5 77 138-215 103-200 (422)
301 KOG1605 TFIIF-interacting CTD 39.8 18 0.00038 32.6 1.7 93 138-235 130-226 (262)
302 PF04230 PS_pyruv_trans: Polys 39.0 52 0.0011 27.8 4.5 40 190-239 246-285 (286)
303 KOG3189 Phosphomannomutase [Li 39.0 24 0.00051 30.8 2.2 28 4-31 13-40 (252)
304 PF05152 DUF705: Protein of un 38.8 21 0.00045 32.6 1.9 16 2-17 122-137 (297)
305 PHA02530 pseT polynucleotide k 38.7 20 0.00043 32.1 1.9 16 3-18 159-174 (300)
306 PF04007 DUF354: Protein of un 38.3 96 0.0021 28.9 6.4 89 137-238 12-111 (335)
307 PF08620 RPAP1_C: RPAP1-like, 37.3 12 0.00026 27.0 0.2 10 5-14 3-12 (73)
308 TIGR01286 nifK nitrogenase mol 36.8 3.4E+02 0.0073 26.9 10.2 37 191-236 425-461 (515)
309 PRK13762 tRNA-modifying enzyme 36.2 87 0.0019 28.9 5.7 29 136-164 139-170 (322)
310 COG1058 CinA Predicted nucleot 35.8 65 0.0014 28.9 4.6 53 190-243 21-73 (255)
311 PRK10017 colanic acid biosynth 35.7 3.7E+02 0.008 25.9 10.1 93 150-257 271-372 (426)
312 COG0541 Ffh Signal recognition 35.4 2.1E+02 0.0045 27.9 8.2 85 137-223 135-230 (451)
313 PTZ00445 p36-lilke protein; Pr 35.2 17 0.00036 31.8 0.7 14 2-15 43-56 (219)
314 COG2179 Predicted hydrolase of 35.1 21 0.00046 30.0 1.3 12 3-14 29-40 (175)
315 cd08199 EEVS 2-epi-5-epi-valio 35.1 2.2E+02 0.0047 26.6 8.3 97 140-238 10-122 (354)
316 PRK10076 pyruvate formate lyas 34.9 1.2E+02 0.0027 26.1 6.2 62 110-171 19-88 (213)
317 TIGR03278 methan_mark_10 putat 34.1 2.2E+02 0.0048 27.3 8.2 66 111-178 55-131 (404)
318 PF04028 DUF374: Domain of unk 33.5 1.8E+02 0.0039 20.8 6.3 55 156-216 15-69 (74)
319 PF06189 5-nucleotidase: 5'-nu 33.0 3.2E+02 0.0069 24.7 8.5 89 134-237 10-109 (264)
320 COG1927 Mtd Coenzyme F420-depe 32.8 2.6E+02 0.0056 24.6 7.6 61 150-216 29-97 (277)
321 COG5083 SMP2 Uncharacterized p 31.8 26 0.00056 34.0 1.5 16 2-17 375-390 (580)
322 COG4483 Uncharacterized protei 31.6 41 0.00089 23.7 2.1 25 195-223 7-31 (68)
323 cd08175 G1PDH Glycerol-1-phosp 31.5 2.5E+02 0.0054 25.9 8.0 88 146-238 16-112 (348)
324 cd06533 Glyco_transf_WecG_TagA 31.1 1.4E+02 0.0031 24.6 5.7 53 192-244 32-86 (171)
325 PF02593 dTMP_synthase: Thymid 30.2 60 0.0013 28.4 3.4 82 139-221 59-149 (217)
326 PLN02887 hydrolase family prot 30.1 1.1E+02 0.0024 30.8 5.6 38 139-177 325-365 (580)
327 PF02358 Trehalose_PPase: Treh 30.0 60 0.0013 28.0 3.4 26 6-31 1-31 (235)
328 TIGR02468 sucrsPsyn_pln sucros 29.5 2E+02 0.0043 31.2 7.6 82 150-239 905-1002(1050)
329 COG2121 Uncharacterized protei 29.1 3.4E+02 0.0073 23.7 7.6 77 155-241 71-157 (214)
330 PF06901 FrpC: RTX iron-regula 29.0 29 0.00062 30.0 1.1 20 2-21 58-77 (271)
331 PF09269 DUF1967: Domain of un 28.9 59 0.0013 22.9 2.6 23 194-216 44-66 (69)
332 PRK14502 bifunctional mannosyl 28.5 93 0.002 32.0 4.8 39 139-178 433-474 (694)
333 COG3769 Predicted hydrolase (H 28.1 84 0.0018 27.9 3.9 15 1-15 6-20 (274)
334 TIGR01357 aroB 3-dehydroquinat 27.7 2.4E+02 0.0052 25.9 7.2 85 152-238 20-115 (344)
335 cd01615 CIDE_N CIDE_N domain, 27.6 34 0.00075 25.0 1.2 15 4-18 42-56 (78)
336 smart00266 CAD Domains present 26.9 36 0.00078 24.6 1.2 15 4-18 40-54 (74)
337 PRK00994 F420-dependent methyl 26.7 2.9E+02 0.0063 24.8 6.9 75 110-186 43-123 (277)
338 COG0052 RpsB Ribosomal protein 26.5 4E+02 0.0087 23.9 7.9 31 208-239 158-188 (252)
339 PF06506 PrpR_N: Propionate ca 26.3 64 0.0014 26.7 2.8 75 150-240 75-153 (176)
340 PF10113 Fibrillarin_2: Fibril 26.3 1E+02 0.0022 29.8 4.3 51 193-243 209-259 (505)
341 TIGR02244 HAD-IG-Ncltidse HAD 25.9 35 0.00075 32.0 1.2 16 3-18 13-28 (343)
342 PF01993 MTD: methylene-5,6,7, 25.8 83 0.0018 28.1 3.4 68 144-217 17-97 (276)
343 cd06537 CIDE_N_B CIDE_N domain 25.5 40 0.00087 24.8 1.2 15 4-18 41-55 (81)
344 cd08197 DOIS 2-deoxy-scyllo-in 25.4 3.5E+02 0.0075 25.3 7.9 94 144-239 14-119 (355)
345 cd06536 CIDE_N_ICAD CIDE_N dom 25.0 41 0.00088 24.7 1.2 15 4-18 44-58 (80)
346 PF07279 DUF1442: Protein of u 24.6 4.8E+02 0.01 22.9 10.7 93 142-244 27-129 (218)
347 cd06539 CIDE_N_A CIDE_N domain 24.5 43 0.00094 24.4 1.3 15 4-18 42-56 (78)
348 KOG3147 6-phosphogluconolacton 24.5 1.2E+02 0.0026 27.1 4.3 60 137-203 156-221 (252)
349 PRK01045 ispH 4-hydroxy-3-meth 24.4 2.7E+02 0.0058 25.6 6.7 80 154-246 192-271 (298)
350 TIGR00216 ispH_lytB (E)-4-hydr 23.7 2.2E+02 0.0047 25.9 5.9 80 154-246 190-269 (280)
351 PLN02151 trehalose-phosphatase 23.3 1.8E+02 0.0038 27.5 5.4 49 159-214 268-320 (354)
352 TIGR03595 Obg_CgtA_exten Obg f 23.3 90 0.0019 22.0 2.7 24 194-217 44-67 (69)
353 PF02017 CIDE-N: CIDE-N domain 23.2 44 0.00095 24.4 1.1 15 4-18 42-56 (78)
354 KOG2832 TFIIF-interacting CTD 23.0 1.6E+02 0.0035 27.9 5.0 71 141-213 216-290 (393)
355 COG4018 Uncharacterized protei 22.9 1.4E+02 0.0029 28.2 4.4 51 193-243 209-259 (505)
356 KOG1618 Predicted phosphatase 22.8 42 0.0009 31.3 1.1 50 193-242 282-345 (389)
357 PF07085 DRTGG: DRTGG domain; 22.6 1.6E+02 0.0035 21.9 4.2 38 206-247 40-78 (105)
358 COG2022 ThiG Uncharacterized e 21.7 5.9E+02 0.013 22.8 11.5 92 137-238 109-212 (262)
359 PRK03692 putative UDP-N-acetyl 21.6 2.8E+02 0.0061 24.5 6.1 62 192-257 91-162 (243)
360 KOG1605 TFIIF-interacting CTD 21.3 21 0.00047 32.1 -1.1 17 2-18 89-105 (262)
361 PRK12360 4-hydroxy-3-methylbut 21.0 2.8E+02 0.006 25.2 6.0 80 154-246 191-270 (281)
362 COG3882 FkbH Predicted enzyme 20.6 54 0.0012 32.3 1.4 15 2-16 222-236 (574)
No 1
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=100.00 E-value=2.8e-39 Score=281.93 Aligned_cols=208 Identities=27% Similarity=0.338 Sum_probs=169.6
Q ss_pred CCcEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhccccccc
Q 024375 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (268)
Q Consensus 1 m~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~ 80 (268)
|.++|+|||||||+||.+.+..++++++++++ ++.. ..+.++.+||.|....+ .+.+...
T Consensus 3 ~~~~iiFDlDGTL~Ds~~~~~~~~~~~~~~~~------~~~~-------~~~~~~~~ig~~~~~~~-~~~~~~~------ 62 (220)
T COG0546 3 MIKAILFDLDGTLVDSAEDILRAFNAALAELG------LPPL-------DEEEIRQLIGLGLDELI-ERLLGEA------ 62 (220)
T ss_pred CCCEEEEeCCCccccChHHHHHHHHHHHHHcC------CCCC-------CHHHHHHHhcCCHHHHH-HHHhccc------
Confidence 36899999999999999999999999999994 3321 13578999999988766 2433210
Q ss_pred ccccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEE
Q 024375 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (268)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~I 157 (268)
.. +...+.++.++++|.+.|.+.. .+.+||||.++|+ ++|++++|
T Consensus 63 --------~~----------------------~~~~~~~~~~~~~~~~~~~~~~--~~~~~~gv~e~L~~L~~~g~~l~i 110 (220)
T COG0546 63 --------DE----------------------EAAAELVERLREEFLTAYAELL--ESRLFPGVKELLAALKSAGYKLGI 110 (220)
T ss_pred --------cc----------------------hhHHHHHHHHHHHHHHHHHhhc--cCccCCCHHHHHHHHHhCCCeEEE
Confidence 00 0001334556666666555544 4689999999999 89999999
Q ss_pred EcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcE
Q 024375 158 VTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (268)
Q Consensus 158 vTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~ 233 (268)
+|||++..++.+|++ +|+..||+.++|.+ .||+|+++..++++++.+|++++|||||.+||++|++ ||+++
T Consensus 111 ~T~k~~~~~~~~l~~-~gl~~~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~----Ag~~~ 185 (220)
T COG0546 111 VTNKPERELDILLKA-LGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKA----AGVPA 185 (220)
T ss_pred EeCCcHHHHHHHHHH-hCCccccceEEcCCCCCCCCcCHHHHHHHHHHhCCChhheEEECCCHHHHHHHHH----cCCCE
Confidence 999999999999996 99999999999944 3599999999999999998899999999999999999 89999
Q ss_pred EEEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 234 YLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 234 i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
++|+|||++.+.+... .|++++.++.+|...|
T Consensus 186 v~v~~g~~~~~~l~~~--~~d~vi~~~~el~~~l 217 (220)
T COG0546 186 VGVTWGYNSREELAQA--GADVVIDSLAELLALL 217 (220)
T ss_pred EEEECCCCCCcchhhc--CCCEEECCHHHHHHHH
Confidence 9999999766666654 6889999999997765
No 2
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=100.00 E-value=1.3e-35 Score=260.11 Aligned_cols=206 Identities=18% Similarity=0.156 Sum_probs=162.8
Q ss_pred CCcEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhccccccc
Q 024375 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (268)
Q Consensus 1 m~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~ 80 (268)
|.++|||||||||+||.+.+..+++.++++++ ++.. ..++++..+|.+.+..+. ..+..
T Consensus 11 ~~k~viFD~DGTL~Ds~~~~~~a~~~~~~~~g------~~~~-------~~~~~~~~~g~~~~~~~~-~~~~~------- 69 (229)
T PRK13226 11 FPRAVLFDLDGTLLDSAPDMLATVNAMLAARG------RAPI-------TLAQLRPVVSKGARAMLA-VAFPE------- 69 (229)
T ss_pred cCCEEEEcCcCccccCHHHHHHHHHHHHHHCC------CCCC-------CHHHHHHHhhhHHHHHHH-HHhcc-------
Confidence 67999999999999999999999999999994 3211 124567777877665431 11100
Q ss_pred ccccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEE
Q 024375 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (268)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~I 157 (268)
++.+..++....+++.|.+.+ .....+|||+.++|+ ++|++++|
T Consensus 70 -----------------------------~~~~~~~~~~~~~~~~~~~~~----~~~~~~~pg~~~~L~~L~~~g~~l~i 116 (229)
T PRK13226 70 -----------------------------LDAAARDALIPEFLQRYEALI----GTQSQLFDGVEGMLQRLECAGCVWGI 116 (229)
T ss_pred -----------------------------CChHHHHHHHHHHHHHHHHhh----hhcCeeCCCHHHHHHHHHHCCCeEEE
Confidence 112222334445555554432 234689999999999 78999999
Q ss_pred EcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcE
Q 024375 158 VTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (268)
Q Consensus 158 vTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~ 233 (268)
+||++...+..+|++ +|+..+|+.+++++ .||+|+++.++++++|++|++|+||||+.+|+++|++ +|+++
T Consensus 117 ~Tn~~~~~~~~~l~~-~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~----aG~~~ 191 (229)
T PRK13226 117 VTNKPEYLARLILPQ-LGWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGVAPTDCVYVGDDERDILAARA----AGMPS 191 (229)
T ss_pred ECCCCHHHHHHHHHH-cCchhcccEEEecCcCCCCCCCHHHHHHHHHHhCCChhhEEEeCCCHHHHHHHHH----CCCcE
Confidence 999999999999996 99999999999865 2599999999999999999999999999999999998 89999
Q ss_pred EEEecCCCCH-HHHHhcCCCCCeeecChhHHhhhc
Q 024375 234 YLVDWGYNTP-KERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 234 i~v~wGy~~~-~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
|+|.||++.. +++.. ..|++++.++++|+++|
T Consensus 192 i~v~~g~~~~~~~~~~--~~~~~~i~~~~el~~~~ 224 (229)
T PRK13226 192 VAALWGYRLHDDDPLA--WQADVLVEQPQLLWNPA 224 (229)
T ss_pred EEEeecCCCCCcChhh--cCCCeeeCCHHHHHHHh
Confidence 9999999743 33433 46899999999999887
No 3
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=100.00 E-value=3.8e-34 Score=247.51 Aligned_cols=202 Identities=16% Similarity=0.141 Sum_probs=157.4
Q ss_pred CCcEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhccccccc
Q 024375 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (268)
Q Consensus 1 m~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~ 80 (268)
|.++|+|||||||+||.+.+..+++.++++++.. ..+ .++++.++|......+
T Consensus 2 ~~~~viFD~DGTL~ds~~~~~~a~~~~~~~~~~~------~~~-------~~~~~~~~G~~~~~~~-------------- 54 (214)
T PRK13288 2 KINTVLFDLDGTLINTNELIISSFLHTLKTYYPN------QYK-------REDVLPFIGPSLHDTF-------------- 54 (214)
T ss_pred CccEEEEeCCCcCccCHHHHHHHHHHHHHHhCCC------CCC-------HHHHHHHhCcCHHHHH--------------
Confidence 3689999999999999999999999999998411 111 1234445554322211
Q ss_pred ccccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEE
Q 024375 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (268)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~I 157 (268)
.. +.++..++....|+..+... ......+|||+.++|+ ++|++++|
T Consensus 55 --------------~~-------------~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~g~~~~l~~L~~~g~~~~i 103 (214)
T PRK13288 55 --------------SK-------------IDESKVEEMITTYREFNHEH----HDELVTEYETVYETLKTLKKQGYKLGI 103 (214)
T ss_pred --------------Hh-------------cCHHHHHHHHHHHHHHHHHh----hhhhcccCcCHHHHHHHHHHCCCeEEE
Confidence 00 01222233334445444322 2334689999999999 68999999
Q ss_pred EcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcE
Q 024375 158 VTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (268)
Q Consensus 158 vTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~ 233 (268)
+||+++..+..+|+. +|+..||+.|+|++ .||+|+++.+++++++++|++++|||||.+|+++|++ +|+++
T Consensus 104 ~S~~~~~~~~~~l~~-~gl~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~----aG~~~ 178 (214)
T PRK13288 104 VTTKMRDTVEMGLKL-TGLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAKPEEALMVGDNHHDILAGKN----AGTKT 178 (214)
T ss_pred EeCCCHHHHHHHHHH-cCChhceeEEEecCcCCCCCCCcHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHH----CCCeE
Confidence 999999999999996 99999999999975 2599999999999999999999999999999999998 89999
Q ss_pred EEEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 234 YLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 234 i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
|+|.||++..+++... .|++++.++.+|...+
T Consensus 179 i~v~~g~~~~~~l~~~--~~~~~i~~~~~l~~~i 210 (214)
T PRK13288 179 AGVAWTIKGREYLEQY--KPDFMLDKMSDLLAIV 210 (214)
T ss_pred EEEcCCCCCHHHHhhc--CcCEEECCHHHHHHHH
Confidence 9999999888777654 5889999999997754
No 4
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=100.00 E-value=1.2e-33 Score=243.29 Aligned_cols=206 Identities=18% Similarity=0.234 Sum_probs=158.1
Q ss_pred EEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhccccccccccc
Q 024375 5 YALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRKSSV 84 (268)
Q Consensus 5 vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~~~~~ 84 (268)
|+|||||||+||.+.+..+++.++++++ .+.. +.++++.++|.+....+ ...+...
T Consensus 1 viFD~DGTL~Ds~~~~~~~~~~~~~~~~------~~~~-------~~~~~~~~~g~~~~~~~-~~~~~~~---------- 56 (213)
T TIGR01449 1 VLFDLDGTLVDSAPDIAAAVNMALAALG------LPPA-------TLARVIGFIGNGVPVLM-ERVLAWA---------- 56 (213)
T ss_pred CeecCCCccccCHHHHHHHHHHHHHHCC------CCCC-------CHHHHHHHhcccHHHHH-HHHhhcc----------
Confidence 6999999999999999999999999884 3211 12345556676654332 1222100
Q ss_pred ccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEEEcCC
Q 024375 85 AEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVTSN 161 (268)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~IvTnK 161 (268)
+. ..+.+..++....+.+.|.+. ......+|||+.++|+ ++|++++|+||+
T Consensus 57 --~~--------------------~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~g~~~~L~~l~~~g~~~~i~S~~ 110 (213)
T TIGR01449 57 --GQ--------------------EPDAQRVAELRKLFDRHYEEV----AGELTSVFPGVEATLGALRAKGLRLGLVTNK 110 (213)
T ss_pred --cc--------------------ccChHHHHHHHHHHHHHHHHh----ccccCccCCCHHHHHHHHHHCCCeEEEEeCC
Confidence 00 012222333344445444433 2334689999999999 789999999999
Q ss_pred chHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEe
Q 024375 162 QSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVD 237 (268)
Q Consensus 162 ~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~ 237 (268)
+...++.+|++ +|+..+|+.++|++ .||+|+++..++++++++|++|+|||||.+|+++|++ +|+++|+|.
T Consensus 111 ~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~----aG~~~i~v~ 185 (213)
T TIGR01449 111 PTPLARPLLEL-LGLAKYFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQQMVYVGDSRVDIQAARA----AGCPSVLLT 185 (213)
T ss_pred CHHHHHHHHHH-cCcHhhCcEEEecCCCCCCCCChHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHH----CCCeEEEEc
Confidence 99999999996 99999999999875 3599999999999999999999999999999999998 899999999
Q ss_pred cCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 238 WGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 238 wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
||+++.+++... .|++++.++.+|.+.|
T Consensus 186 ~g~~~~~~l~~~--~a~~~i~~~~~l~~~~ 213 (213)
T TIGR01449 186 YGYRYGEAIDLL--PPDVLYDSLNELPPLL 213 (213)
T ss_pred cCCCCCcchhhc--CCCeEeCCHHHHHhhC
Confidence 999877666654 5789999999998754
No 5
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=100.00 E-value=7.6e-33 Score=245.47 Aligned_cols=215 Identities=11% Similarity=0.028 Sum_probs=159.8
Q ss_pred cEEEEecCcccccChh-HHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhcccccccc
Q 024375 3 DLYALDFDGVICDSCE-ETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (268)
Q Consensus 3 ~~vlFDlDGTLvDS~~-~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~~ 81 (268)
++|+|||||||+||.. .+..+++.++++++ ++. . .++++..+|.+....+. ..+ .
T Consensus 3 k~viFD~DGTLiDs~~~~~~~a~~~~~~~~g------~~~-~-------~~~~~~~~G~~~~~~~~-~~~-~-------- 58 (253)
T TIGR01422 3 EAVIFDWAGTTVDFGSFAPTQAFVEAFAEFG------VQI-T-------LEEARGPMGLGKWDHIR-ALL-K-------- 58 (253)
T ss_pred eEEEEeCCCCeecCCCccHHHHHHHHHHHcC------CCc-c-------HHHHHHhcCccHHHHHH-HHh-c--------
Confidence 7899999999999965 35778899998883 321 1 13455666766544331 111 0
Q ss_pred cccccCCcHHHHHhhhhhhhHHHHHhhC--CCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEE
Q 024375 82 SSVAEGLTVEGILENWLKIKPVIMEEWS--ENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIY 156 (268)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~ 156 (268)
..+.. +.+.+.+| .+.+++++....|++.|.+. ......+|||+.++|+ ++|++++
T Consensus 59 --------~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~pg~~e~L~~L~~~g~~l~ 119 (253)
T TIGR01422 59 --------MPAVA-------ERWRAKFGRLPTEADIEAIYEAFEPLQLAK----LAEYSSPIPGVIEVIAYLRARGIKIG 119 (253)
T ss_pred --------CHHHH-------HHHHHHhCCCCCHHHHHHHHHHHHHHHHHH----HHhcCccCCCHHHHHHHHHHCCCeEE
Confidence 00111 11222333 24455555566666655433 2345789999999999 7899999
Q ss_pred EEcCCchHHHHHHHHHhcCCCCCC-ceEecCC----CCCcHHHHHHHHhcCCCC-CCcEEEEcCcHhhHHHhhccCccCC
Q 024375 157 IVTSNQSRFVETLLRELAGVTITP-DRLYGLG----TGPKVNVLKQLQKKPEHQ-GLRLHFVEDRLATLKNVIKEPELDG 230 (268)
Q Consensus 157 IvTnK~~~~~~~~L~~~~gl~~~f-~~i~g~~----~~pkp~~l~~~~~~l~~~-~~~~~~VGDs~~Di~aa~~~~~~ag 230 (268)
|+||++...++.+|++ +|+..+| +.|+|++ .||+|+++..+++++++. |++|+|||||.+|+++|++ ||
T Consensus 120 IvT~~~~~~~~~~l~~-~gl~~~f~d~ii~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~----aG 194 (253)
T TIGR01422 120 STTGYTREMMDVVAPE-AALQGYRPDYNVTTDDVPAGRPAPWMALKNAIELGVYDVAACVKVGDTVPDIEEGRN----AG 194 (253)
T ss_pred EECCCcHHHHHHHHHH-HHhcCCCCceEEccccCCCCCCCHHHHHHHHHHcCCCCchheEEECCcHHHHHHHHH----CC
Confidence 9999999999999996 9999985 8999876 359999999999999995 9999999999999999998 89
Q ss_pred CcEEEEecCCCC-----------------------HHHHHhcCCCCCeeecChhHHhhhc
Q 024375 231 WNLYLVDWGYNT-----------------------PKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 231 i~~i~v~wGy~~-----------------------~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
+++|+|.||++. .+++.. ..|++++.++++|...|
T Consensus 195 i~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~v~~~~~el~~~~ 252 (253)
T TIGR01422 195 MWTVGLILSSNELGLSEEEYRALDPAELEARRAEATARLKA--AGAHYVIDTLAELPAVI 252 (253)
T ss_pred CeEEEEecCCcccCCCHHHHHhCCHHHHHHHHHHHHHHHHh--cCCCEehhcHHHHHHhh
Confidence 999999999973 345654 46889999999997765
No 6
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=100.00 E-value=1.3e-32 Score=238.60 Aligned_cols=207 Identities=15% Similarity=0.092 Sum_probs=161.0
Q ss_pred CcEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccc-cccchhhHHHHHHHHHhccccccc
Q 024375 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRP-VVETGYDTLLLVRLLLEMRLPSLR 80 (268)
Q Consensus 2 ~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~-~vg~G~~~~~~~~~l~~~~~~~~~ 80 (268)
.++|+|||||||+||.+.+..+.+.++++++ ++... ++.+. ++|.+....+ .+.+
T Consensus 1 ~k~iiFD~DGTL~ds~~~~~~~~~~~~~~~g------~~~~~--------~~~~~~~~g~~~~~~~-~~~~--------- 56 (220)
T TIGR03351 1 ISLVVLDMAGTTVDEDGLVYRALRQAVTAAG------LSPTP--------EEVQSAWMGQSKIEAI-RALL--------- 56 (220)
T ss_pred CcEEEEecCCCeeccCchHHHHHHHHHHHcC------CCCCH--------HHHHHhhcCCCHHHHH-HHHH---------
Confidence 3789999999999999999999999999883 33111 12223 5665544432 1221
Q ss_pred ccccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEE
Q 024375 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (268)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~I 157 (268)
+.+|.+.+..++....|++.|.+.+.. ...++|||+.++|+ ++|++++|
T Consensus 57 -------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~G~~~~L~~L~~~g~~~~i 108 (220)
T TIGR03351 57 -------------------------ALDGADEAEAQAAFADFEERLAEAYDD---GPPVALPGAEEAFRSLRSSGIKVAL 108 (220)
T ss_pred -------------------------hccCCCHHHHHHHHHHHHHHHHHHhcc---cCCccCCCHHHHHHHHHHCCCEEEE
Confidence 112233334444455555555443321 23589999999999 68999999
Q ss_pred EcCCchHHHHHHHHHhcCCC--CCCceEecCC----CCCcHHHHHHHHhcCCCC-CCcEEEEcCcHhhHHHhhccCccCC
Q 024375 158 VTSNQSRFVETLLRELAGVT--ITPDRLYGLG----TGPKVNVLKQLQKKPEHQ-GLRLHFVEDRLATLKNVIKEPELDG 230 (268)
Q Consensus 158 vTnK~~~~~~~~L~~~~gl~--~~f~~i~g~~----~~pkp~~l~~~~~~l~~~-~~~~~~VGDs~~Di~aa~~~~~~ag 230 (268)
+||+....+..+|++ +|+. .+|+.+++++ .||+|+++..+++++++. |++|+||||+..|+++|++ +|
T Consensus 109 vT~~~~~~~~~~l~~-~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~----aG 183 (220)
T TIGR03351 109 TTGFDRDTAERLLEK-LGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDVQSVAVAGDTPNDLEAGIN----AG 183 (220)
T ss_pred EeCCchHHHHHHHHH-hhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHH----CC
Confidence 999999999999996 9998 9999999875 259999999999999997 7999999999999999998 89
Q ss_pred CcE-EEEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 231 WNL-YLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 231 i~~-i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
+++ |+|.||+.+.+++... .|++++.++.+|...|
T Consensus 184 ~~~~i~~~~g~~~~~~~~~~--~~~~~i~~~~~l~~~~ 219 (220)
T TIGR03351 184 AGAVVGVLTGAHDAEELSRH--PHTHVLDSVADLPALL 219 (220)
T ss_pred CCeEEEEecCCCcHHHHhhc--CCceeecCHHHHHHhh
Confidence 999 9999999888777654 6889999999998765
No 7
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=100.00 E-value=7.8e-33 Score=245.43 Aligned_cols=203 Identities=12% Similarity=0.072 Sum_probs=151.3
Q ss_pred CcEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhcccccccc
Q 024375 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (268)
Q Consensus 2 ~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~~ 81 (268)
.++|+|||||||+||.+.+..+++.++++++-. .|.+.. . ....+.++|.+.+..+ .+.+..
T Consensus 22 ~k~viFDlDGTLiDs~~~~~~a~~~~~~~~g~~--~g~~~~-~------~~~~~~~~G~~~~~~~-~~~~~~-------- 83 (248)
T PLN02770 22 LEAVLFDVDGTLCDSDPLHYYAFREMLQEINFN--GGVPIT-E------EFFVENIAGKHNEDIA-LGLFPD-------- 83 (248)
T ss_pred cCEEEEcCCCccCcCHHHHHHHHHHHHHHhccc--cCCCCC-H------HHHHHHcCCCCHHHHH-HHHcCc--------
Confidence 479999999999999999999999999998311 012211 0 1124456676554433 121100
Q ss_pred cccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEEE
Q 024375 82 SSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIV 158 (268)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~Iv 158 (268)
.. +...+....++..|.... .....+|||+.++|+ ++|++++|+
T Consensus 84 -------~~----------------------~~~~~~~~~~~~~y~~~~----~~~~~l~pgv~e~L~~L~~~g~~l~I~ 130 (248)
T PLN02770 84 -------DL----------------------ERGLKFTDDKEALFRKLA----SEQLKPLNGLYKLKKWIEDRGLKRAAV 130 (248)
T ss_pred -------ch----------------------hhHHHHHHHHHHHHHHHH----HhcCCcCccHHHHHHHHHHcCCeEEEE
Confidence 00 000111122333333321 234689999999999 789999999
Q ss_pred cCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEE
Q 024375 159 TSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 234 (268)
Q Consensus 159 TnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i 234 (268)
||+++..++..|++ +|+..||+.|++++ .||+|+++..++++++++|++|+||||+.+|+++|++ +|+++|
T Consensus 131 Tn~~~~~~~~~l~~-~gl~~~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~----aGi~~i 205 (248)
T PLN02770 131 TNAPRENAELMISL-LGLSDFFQAVIIGSECEHAKPHPDPYLKALEVLKVSKDHTFVFEDSVSGIKAGVA----AGMPVV 205 (248)
T ss_pred eCCCHHHHHHHHHH-cCChhhCcEEEecCcCCCCCCChHHHHHHHHHhCCChhHEEEEcCCHHHHHHHHH----CCCEEE
Confidence 99999999999996 99999999999876 2599999999999999999999999999999999998 899999
Q ss_pred EEecCCCCHHHHHhcCCCCCeeecChhHH
Q 024375 235 LVDWGYNTPKERAEAASMPRIQLLQLSDF 263 (268)
Q Consensus 235 ~v~wGy~~~~el~~~~~~P~~~~~~~~~~ 263 (268)
+|.||+ ..+++.. ..|++++.+++++
T Consensus 206 ~v~~g~-~~~~l~~--~~a~~vi~~~~e~ 231 (248)
T PLN02770 206 GLTTRN-PESLLME--AKPTFLIKDYEDP 231 (248)
T ss_pred EEeCCC-CHHHHhh--cCCCEEeccchhh
Confidence 999996 4555554 4688999999984
No 8
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=100.00 E-value=1.6e-32 Score=246.97 Aligned_cols=202 Identities=22% Similarity=0.212 Sum_probs=157.7
Q ss_pred CcEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhcccccccc
Q 024375 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (268)
Q Consensus 2 ~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~~ 81 (268)
.++++|||||||+||.+.+..+++.++++++ ++..+ .+.++.++|...+..+
T Consensus 62 ~k~vIFDlDGTLiDS~~~~~~a~~~~~~~~G------~~~~~-------~~~~~~~~g~~~~~i~--------------- 113 (273)
T PRK13225 62 LQAIIFDFDGTLVDSLPTVVAIANAHAPDFG------YDPID-------ERDYAQLRQWSSRTIV--------------- 113 (273)
T ss_pred cCEEEECCcCccccCHHHHHHHHHHHHHHCC------CCCCC-------HHHHHHHhCccHHHHH---------------
Confidence 4789999999999999999999999999983 32111 1233444443322211
Q ss_pred cccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEEE
Q 024375 82 SSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIV 158 (268)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~Iv 158 (268)
+.++.+.++.++....|++.+.. +....++||||.++|+ ++|++++|+
T Consensus 114 ------------------------~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~pg~~e~L~~L~~~gi~laIv 164 (273)
T PRK13225 114 ------------------------RRAGLSPWQQARLLQRVQRQLGD-----CLPALQLFPGVADLLAQLRSRSLCLGIL 164 (273)
T ss_pred ------------------------HHcCCCHHHHHHHHHHHHHHHHh-----hcccCCcCCCHHHHHHHHHHCCCeEEEE
Confidence 11123333333444455554432 2345689999999999 789999999
Q ss_pred cCCchHHHHHHHHHhcCCCCCCceEecCCC-CCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEe
Q 024375 159 TSNQSRFVETLLRELAGVTITPDRLYGLGT-GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVD 237 (268)
Q Consensus 159 TnK~~~~~~~~L~~~~gl~~~f~~i~g~~~-~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~ 237 (268)
||+....++.+|++ +|+..+|+.|++.+. .+||+++..++++++++|++|+||||+..|+++|++ ||+.+|+|.
T Consensus 165 Sn~~~~~~~~~L~~-~gl~~~F~~vi~~~~~~~k~~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~----AG~~~I~v~ 239 (273)
T PRK13225 165 SSNSRQNIEAFLQR-QGLRSLFSVVQAGTPILSKRRALSQLVAREGWQPAAVMYVGDETRDVEAARQ----VGLIAVAVT 239 (273)
T ss_pred eCCCHHHHHHHHHH-cCChhheEEEEecCCCCCCHHHHHHHHHHhCcChhHEEEECCCHHHHHHHHH----CCCeEEEEe
Confidence 99999999999995 999999999987664 488999999999999999999999999999999998 899999999
Q ss_pred cCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 238 WGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 238 wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
||+...+++... .|++++.++++|...+
T Consensus 240 ~g~~~~~~l~~~--~ad~~i~~~~eL~~~~ 267 (273)
T PRK13225 240 WGFNDRQSLVAA--CPDWLLETPSDLLQAV 267 (273)
T ss_pred cCCCCHHHHHHC--CCCEEECCHHHHHHHH
Confidence 999988878754 5889999999996643
No 9
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=100.00 E-value=1.3e-32 Score=236.45 Aligned_cols=196 Identities=20% Similarity=0.255 Sum_probs=152.5
Q ss_pred EEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhccccccccccc
Q 024375 5 YALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRKSSV 84 (268)
Q Consensus 5 vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~~~~~ 84 (268)
|+|||||||+||.+.+..+++.+++++. |.+.. +.++++.++|..++..+ +.+
T Consensus 1 iiFDlDGTL~Ds~~~~~~~~~~~~~~~~-----~~~~~-------~~~~~~~~~g~~~~~~~--~~~------------- 53 (205)
T TIGR01454 1 VVFDLDGVLVDSFAVMREAFAIAYREVV-----GDGPA-------PFEEYRRHLGRYFPDIM--RIM------------- 53 (205)
T ss_pred CeecCcCccccCHHHHHHHHHHHHHHhc-----CCCCC-------CHHHHHHHhCccHHHHH--HHc-------------
Confidence 6899999999999999999999999862 22111 12356666776554432 111
Q ss_pred ccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEEEcCC
Q 024375 85 AEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVTSN 161 (268)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~IvTnK 161 (268)
+ ++... .+. .++..| . .....++|||+.++|+ ++|++++|+||+
T Consensus 54 --~----------------------~~~~~-~~~--~~~~~~-~-----~~~~~~~~~g~~~~L~~L~~~g~~~~i~Sn~ 100 (205)
T TIGR01454 54 --G----------------------LPLEM-EEP--FVRESY-R-----LAGEVEVFPGVPELLAELRADGVGTAIATGK 100 (205)
T ss_pred --C----------------------CCHHH-HHH--HHHHHH-H-----hhcccccCCCHHHHHHHHHHCCCeEEEEeCC
Confidence 1 11000 000 011111 1 1234689999999999 789999999999
Q ss_pred chHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEe
Q 024375 162 QSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVD 237 (268)
Q Consensus 162 ~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~ 237 (268)
+...++..+++ +|+..+|+.++|.+ .||+|+++..++++++++|++|+||||+.+|+++|++ +|+++|+|.
T Consensus 101 ~~~~~~~~l~~-~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~----~Gi~~i~~~ 175 (205)
T TIGR01454 101 SGPRARSLLEA-LGLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDAVMVGDAVTDLASARA----AGTATVAAL 175 (205)
T ss_pred chHHHHHHHHH-cCChhheeeEEecCcCCCCCCChHHHHHHHHHcCCChhheEEEcCCHHHHHHHHH----cCCeEEEEE
Confidence 99999999995 99999999999875 2599999999999999999999999999999999999 899999999
Q ss_pred cCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 238 WGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 238 wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
||+++.+++... .|++++.++.+|...+
T Consensus 176 ~g~~~~~~l~~~--~~~~~~~~~~~l~~~~ 203 (205)
T TIGR01454 176 WGEGDAGELLAA--RPDFLLRKPQSLLALC 203 (205)
T ss_pred ecCCChhhhhhc--CCCeeeCCHHHHHHHh
Confidence 999998887654 5889999999998765
No 10
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=100.00 E-value=4.9e-32 Score=242.47 Aligned_cols=216 Identities=13% Similarity=0.043 Sum_probs=157.3
Q ss_pred CcEEEEecCcccccChhH-HHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhccccccc
Q 024375 2 EDLYALDFDGVICDSCEE-TALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (268)
Q Consensus 2 ~~~vlFDlDGTLvDS~~~-i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~ 80 (268)
.++|||||||||+||... ...+++.++++++ ++.. .++++..+|.+....+ +.+..
T Consensus 4 ~k~vIFDlDGTLiDs~~~~~~~a~~~~~~~~g------~~~~--------~~~~~~~~G~~~~~~~--~~~~~------- 60 (267)
T PRK13478 4 IQAVIFDWAGTTVDFGSFAPTQAFVEAFAQFG------VEIT--------LEEARGPMGLGKWDHI--RALLK------- 60 (267)
T ss_pred eEEEEEcCCCCeecCCCccHHHHHHHHHHHcC------CCCC--------HHHHHHhcCCCHHHHH--HHHHh-------
Confidence 489999999999999654 3678899998883 3211 1345566676543332 11100
Q ss_pred ccccccCCcHHHHHhhhhhhhHHHHHhhCC--CHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcE
Q 024375 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSE--NREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRI 155 (268)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l 155 (268)
. .. ....+.+.+|. +.+++.+....|++.|.+. +.....+|||+.++|+ ++|+++
T Consensus 61 -------~--~~-------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~pg~~elL~~L~~~g~~l 120 (267)
T PRK13478 61 -------M--PR-------VAARWQAVFGRLPTEADVDALYAAFEPLQIAK----LADYATPIPGVLEVIAALRARGIKI 120 (267)
T ss_pred -------c--HH-------HHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHH----HhhcCCCCCCHHHHHHHHHHCCCEE
Confidence 0 00 01112222332 3444555555566555443 2345689999999999 789999
Q ss_pred EEEcCCchHHHHHHHHHhcCCCCCC-ceEecCC----CCCcHHHHHHHHhcCCCC-CCcEEEEcCcHhhHHHhhccCccC
Q 024375 156 YIVTSNQSRFVETLLRELAGVTITP-DRLYGLG----TGPKVNVLKQLQKKPEHQ-GLRLHFVEDRLATLKNVIKEPELD 229 (268)
Q Consensus 156 ~IvTnK~~~~~~~~L~~~~gl~~~f-~~i~g~~----~~pkp~~l~~~~~~l~~~-~~~~~~VGDs~~Di~aa~~~~~~a 229 (268)
+|+||+++..+..+|+. +|+..+| +.|+|++ .||+|+++..+++++++. +++|+|||||.+|+++|++ |
T Consensus 121 ~I~T~~~~~~~~~~l~~-~~l~~~~~d~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~----a 195 (267)
T PRK13478 121 GSTTGYTREMMDVVVPL-AAAQGYRPDHVVTTDDVPAGRPYPWMALKNAIELGVYDVAACVKVDDTVPGIEEGLN----A 195 (267)
T ss_pred EEEcCCcHHHHHHHHHH-HhhcCCCceEEEcCCcCCCCCCChHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHH----C
Confidence 99999999999999995 9988774 8898875 359999999999999996 6999999999999999999 8
Q ss_pred CCcEEEEecCCCC-----------------------HHHHHhcCCCCCeeecChhHHhhhc
Q 024375 230 GWNLYLVDWGYNT-----------------------PKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 230 gi~~i~v~wGy~~-----------------------~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
|+++|+|.||++. .+++..+ .|++++.++.+|.+.|
T Consensus 196 G~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~a~~vi~~~~~l~~~l 254 (267)
T PRK13478 196 GMWTVGVILSGNELGLSEEEYQALSAAELAARRERARARLRAA--GAHYVIDTIADLPAVI 254 (267)
T ss_pred CCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHHHHHHHc--CCCeehhhHHHHHHHH
Confidence 9999999999973 2455554 5789999999997655
No 11
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=100.00 E-value=4.7e-32 Score=243.74 Aligned_cols=210 Identities=21% Similarity=0.255 Sum_probs=164.6
Q ss_pred CCcEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhccccccc
Q 024375 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (268)
Q Consensus 1 m~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~ 80 (268)
|.++|+|||||||+||.+.+..+++.++++++ ++.. ..+.++.++|.|...+. ...+..
T Consensus 12 ~~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~g------~~~~-------~~~~~~~~~g~~~~~~~-~~~l~~------- 70 (272)
T PRK13223 12 LPRLVMFDLDGTLVDSVPDLAAAVDRMLLELG------RPPA-------GLEAVRHWVGNGAPVLV-RRALAG------- 70 (272)
T ss_pred cCCEEEEcCCCccccCHHHHHHHHHHHHHHcC------CCCC-------CHHHHHHHhChhHHHHH-HHHhcc-------
Confidence 67899999999999999999999999999984 3211 12356678888765543 122210
Q ss_pred ccccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEE
Q 024375 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (268)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~I 157 (268)
....++++++..++....+++.|... .....+|||+.++|+ ++|++++|
T Consensus 71 -----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~g~~e~L~~Lk~~g~~l~i 122 (272)
T PRK13223 71 -----------------------SIDHDGVDDELAEQALALFMEAYADS-----HELTVVYPGVRDTLKWLKKQGVEMAL 122 (272)
T ss_pred -----------------------cccccCCCHHHHHHHHHHHHHHHHhc-----CcCCccCCCHHHHHHHHHHCCCeEEE
Confidence 00112233444445555556655432 124689999999999 68999999
Q ss_pred EcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcE
Q 024375 158 VTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (268)
Q Consensus 158 vTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~ 233 (268)
+||++...++.+|++ +|+..+|+.|++++ .||+|++++.+++++|++|++|+||||+.+|+++|++ +|+++
T Consensus 123 vTn~~~~~~~~~l~~-~~i~~~f~~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~----aGi~~ 197 (272)
T PRK13223 123 ITNKPERFVAPLLDQ-MKIGRYFRWIIGGDTLPQKKPDPAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKA----AGVQC 197 (272)
T ss_pred EECCcHHHHHHHHHH-cCcHhhCeEEEecCCCCCCCCCcHHHHHHHHHhCCChhHEEEECCCHHHHHHHHH----CCCeE
Confidence 999999999999996 99999999999876 2599999999999999999999999999999999999 89999
Q ss_pred EEEecCCCCHHHHHhcCCCCCeeecChhHHhhh
Q 024375 234 YLVDWGYNTPKERAEAASMPRIQLLQLSDFCTK 266 (268)
Q Consensus 234 i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~ 266 (268)
++|.|||+...++... .|++++.++.+|...
T Consensus 198 i~v~~G~~~~~~l~~~--~~~~vi~~l~el~~~ 228 (272)
T PRK13223 198 VALSYGYNHGRPIAEE--SPALVIDDLRALLPG 228 (272)
T ss_pred EEEecCCCCchhhhhc--CCCEEECCHHHHHHH
Confidence 9999999887776654 588999999999654
No 12
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=99.98 E-value=2e-31 Score=238.33 Aligned_cols=200 Identities=13% Similarity=0.106 Sum_probs=150.8
Q ss_pred cEEEEecCcccccChhHHH-HHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhcccccccc
Q 024375 3 DLYALDFDGVICDSCEETA-LSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (268)
Q Consensus 3 ~~vlFDlDGTLvDS~~~i~-~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~~ 81 (268)
++|||||||||+||.+.++ .+++.++++++ ++... .+.++.++|......+ ...+..
T Consensus 25 k~vIFDlDGTLvDS~~~~~~~a~~~~~~~~G------~~~~~-------~e~~~~~~G~~~~~~~-~~l~~~-------- 82 (260)
T PLN03243 25 LGVVLEWEGVIVEDDSELERKAWRALAEEEG------KRPPP-------AFLLKRAEGMKNEQAI-SEVLCW-------- 82 (260)
T ss_pred eEEEEeCCCceeCCchHHHHHHHHHHHHHcC------CCCCH-------HHHHHHhcCCCHHHHH-HHHhcc--------
Confidence 7899999999999987666 58889999984 33111 1345667887665543 222210
Q ss_pred cccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEEE
Q 024375 82 SSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIV 158 (268)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~Iv 158 (268)
. .+.+.+.+....++..|.... .....+|||+.++|+ ++|++++|+
T Consensus 83 -----~----------------------~~~~~~~~l~~~~~~~~~~~~----~~~~~l~pg~~e~L~~L~~~g~~l~I~ 131 (260)
T PLN03243 83 -----S----------------------RDFLQMKRLAIRKEDLYEYMQ----GGLYRLRPGSREFVQALKKHEIPIAVA 131 (260)
T ss_pred -----C----------------------CCHHHHHHHHHHHHHHHHHHH----ccCcccCCCHHHHHHHHHHCCCEEEEE
Confidence 0 011122222233333332111 123579999999999 689999999
Q ss_pred cCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEE
Q 024375 159 TSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 234 (268)
Q Consensus 159 TnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i 234 (268)
||++...++.+|++ +|+..||+.|++++ .||+|+++..+++++++.|++|+|||||.+|+++|++ ||+++|
T Consensus 132 Tn~~~~~~~~~l~~-~gl~~~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~----aG~~~i 206 (260)
T PLN03243 132 STRPRRYLERAIEA-VGMEGFFSVVLAAEDVYRGKPDPEMFMYAAERLGFIPERCIVFGNSNSSVEAAHD----GCMKCV 206 (260)
T ss_pred eCcCHHHHHHHHHH-cCCHhhCcEEEecccCCCCCCCHHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHH----cCCEEE
Confidence 99999999999995 99999999999875 3599999999999999999999999999999999999 899999
Q ss_pred EEecCCCCHHHHHhcCCCCCeeecChhHHhh
Q 024375 235 LVDWGYNTPKERAEAASMPRIQLLQLSDFCT 265 (268)
Q Consensus 235 ~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~ 265 (268)
+|. |+++..++. .|++++.++++|..
T Consensus 207 ~v~-g~~~~~~l~----~ad~vi~~~~el~~ 232 (260)
T PLN03243 207 AVA-GKHPVYELS----AGDLVVRRLDDLSV 232 (260)
T ss_pred EEe-cCCchhhhc----cCCEEeCCHHHHHH
Confidence 995 887765543 47899999999854
No 13
>PRK11587 putative phosphatase; Provisional
Probab=99.97 E-value=1.2e-30 Score=226.67 Aligned_cols=195 Identities=17% Similarity=0.142 Sum_probs=142.7
Q ss_pred CcEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhcccccccc
Q 024375 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (268)
Q Consensus 2 ~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~~ 81 (268)
.++|+|||||||+||.+.+..+++.+++++ |++.. +..+.+.|.+....+ +.+..
T Consensus 3 ~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~------g~~~~---------~~~~~~~g~~~~~~~--~~~~~-------- 57 (218)
T PRK11587 3 CKGFLFDLDGTLVDSLPAVERAWSNWADRH------GIAPD---------EVLNFIHGKQAITSL--RHFMA-------- 57 (218)
T ss_pred CCEEEEcCCCCcCcCHHHHHHHHHHHHHHc------CCCHH---------HHHHHHcCCCHHHHH--HHHhc--------
Confidence 589999999999999999999999999999 34310 112223455443332 21211
Q ss_pred cccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEEE
Q 024375 82 SSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIV 158 (268)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~Iv 158 (268)
+ .+.+.+.+.+..++ .|.. .......+|||+.++|+ ++|++++|+
T Consensus 58 -----~----------------------~~~~~~~~~~~~~~-~~~~----~~~~~~~~~pg~~e~L~~L~~~g~~~~iv 105 (218)
T PRK11587 58 -----G----------------------ASEAEIQAEFTRLE-QIEA----TDTEGITALPGAIALLNHLNKLGIPWAIV 105 (218)
T ss_pred -----c----------------------CCcHHHHHHHHHHH-HHHH----hhhcCceeCcCHHHHHHHHHHcCCcEEEE
Confidence 0 11111112222111 1111 12345689999999998 799999999
Q ss_pred cCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEE
Q 024375 159 TSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 234 (268)
Q Consensus 159 TnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i 234 (268)
||++...+...++. .|+. +|+.+++.+ .||+|+++..+++++|++|++|+|||||..|+++|++ ||+++|
T Consensus 106 Tn~~~~~~~~~l~~-~~l~-~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~----aG~~~i 179 (218)
T PRK11587 106 TSGSVPVASARHKA-AGLP-APEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLA----AGCHVI 179 (218)
T ss_pred cCCCchHHHHHHHh-cCCC-CccEEEEHHHhcCCCCCcHHHHHHHHHcCCCcccEEEEecchhhhHHHHH----CCCEEE
Confidence 99999999999995 8984 567787754 3599999999999999999999999999999999998 899999
Q ss_pred EEecCCCCHHHHHhcCCCCCeeecChhHHh
Q 024375 235 LVDWGYNTPKERAEAASMPRIQLLQLSDFC 264 (268)
Q Consensus 235 ~v~wGy~~~~el~~~~~~P~~~~~~~~~~~ 264 (268)
+|.||+... +. ..|++++.++++|.
T Consensus 180 ~v~~~~~~~-~~----~~~~~~~~~~~el~ 204 (218)
T PRK11587 180 AVNAPADTP-RL----DEVDLVLHSLEQLT 204 (218)
T ss_pred EECCCCchh-hh----ccCCEEecchhhee
Confidence 999987432 21 25889999999873
No 14
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=99.97 E-value=3.6e-30 Score=239.83 Aligned_cols=199 Identities=12% Similarity=0.078 Sum_probs=150.3
Q ss_pred cEEEEecCcccccChhHHHH-HHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhcccccccc
Q 024375 3 DLYALDFDGVICDSCEETAL-SAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (268)
Q Consensus 3 ~~vlFDlDGTLvDS~~~i~~-s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~~ 81 (268)
++|||||||||+||.+.++. +.+.++++++ ++... .+.++.++|.+....+ .+.+..
T Consensus 132 ~~VIFDlDGTLIDS~~~i~~~a~~~l~~e~G------~~~~~-------~e~~~~~~G~~~~~~l-~~ll~~-------- 189 (381)
T PLN02575 132 LGAIFEWEGVIIEDNPDLENQAWLTLAQEEG------KSPPP-------AFILRRVEGMKNEQAI-SEVLCW-------- 189 (381)
T ss_pred CEEEEcCcCcceeCHHHHHHHHHHHHHHHcC------CCCCH-------HHHHHHhcCCCHHHHH-HHHhhc--------
Confidence 68999999999999998876 5556667773 33211 1245667776655433 122210
Q ss_pred cccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEEE
Q 024375 82 SSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIV 158 (268)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~Iv 158 (268)
..+..+.++....+++.|.+.. .....+|||+.++|+ ++|++++|+
T Consensus 190 ---------------------------~~~~~~~e~l~~~~~~~y~~~~----~~~~~l~pGa~ElL~~Lk~~GiklaIa 238 (381)
T PLN02575 190 ---------------------------SRDPAELRRMATRKEEIYQALQ----GGIYRLRTGSQEFVNVLMNYKIPMALV 238 (381)
T ss_pred ---------------------------cCCHHHHHHHHHHHHHHHHHHh----ccCCCcCcCHHHHHHHHHHCCCeEEEE
Confidence 0112233334444555554332 234689999999999 799999999
Q ss_pred cCCchHHHHHHHHHhcCCCCCCceEecCCC----CCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEE
Q 024375 159 TSNQSRFVETLLRELAGVTITPDRLYGLGT----GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 234 (268)
Q Consensus 159 TnK~~~~~~~~L~~~~gl~~~f~~i~g~~~----~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i 234 (268)
||+++..++.+|++ +||..||+.|+|++. ||+|+++..+++++|+.|++|+|||||..|+++|++ ||+++|
T Consensus 239 Sn~~~~~~~~~L~~-lgL~~yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~Peecl~IGDS~~DIeAAk~----AGm~~I 313 (381)
T PLN02575 239 STRPRKTLENAIGS-IGIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPERCIVFGNSNQTVEAAHD----ARMKCV 313 (381)
T ss_pred eCCCHHHHHHHHHH-cCCHHHceEEEecCcCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHH----cCCEEE
Confidence 99999999999996 999999999999762 599999999999999999999999999999999998 899999
Q ss_pred EEecCCCCHHHHHhcCCCCCeeecChhHHh
Q 024375 235 LVDWGYNTPKERAEAASMPRIQLLQLSDFC 264 (268)
Q Consensus 235 ~v~wGy~~~~el~~~~~~P~~~~~~~~~~~ 264 (268)
+|.||+ ...++ ..+++++.++.+|.
T Consensus 314 gV~~~~-~~~~l----~~Ad~iI~s~~EL~ 338 (381)
T PLN02575 314 AVASKH-PIYEL----GAADLVVRRLDELS 338 (381)
T ss_pred EECCCC-ChhHh----cCCCEEECCHHHHH
Confidence 999986 33333 24789999999983
No 15
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=99.97 E-value=4.2e-30 Score=222.85 Aligned_cols=209 Identities=25% Similarity=0.294 Sum_probs=161.6
Q ss_pred CcEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhcccccccc
Q 024375 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (268)
Q Consensus 2 ~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~~ 81 (268)
.++|+|||||||+||.+....+++.++++++ .+... .+.++.++|.+...++ .+.+...
T Consensus 6 ~~~iiFD~DGTL~d~~~~~~~~~~~~~~~~~------~~~~~-------~~~~~~~~g~~~~~~~-~~~~~~~------- 64 (226)
T PRK13222 6 IRAVAFDLDGTLVDSAPDLAAAVNAALAALG------LPPAG-------EERVRTWVGNGADVLV-ERALTWA------- 64 (226)
T ss_pred CcEEEEcCCcccccCHHHHHHHHHHHHHHCC------CCCCC-------HHHHHHHhCccHHHHH-HHHHhhc-------
Confidence 4899999999999999999999999988884 22111 2345666777765543 2222110
Q ss_pred cccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEEE
Q 024375 82 SSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIV 158 (268)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~Iv 158 (268)
+ ..++.++.++....+.+.|.+. ......++||+.++|+ ++|++++|+
T Consensus 65 -----~--------------------~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~g~~~~l~~l~~~g~~~~i~ 115 (226)
T PRK13222 65 -----G--------------------REPDEELLEKLRELFDRHYAEN----VAGGSRLYPGVKETLAALKAAGYPLAVV 115 (226)
T ss_pred -----c--------------------CCccHHHHHHHHHHHHHHHHHh----ccccCccCCCHHHHHHHHHHCCCeEEEE
Confidence 0 0123344444445555555432 2234689999999999 689999999
Q ss_pred cCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEE
Q 024375 159 TSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 234 (268)
Q Consensus 159 TnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i 234 (268)
||+....++.++++ +|+..+|+.+++.+ .||+|+++..++++++.++++|+||||+.+|+++|++ +|+++|
T Consensus 116 S~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~----~g~~~i 190 (226)
T PRK13222 116 TNKPTPFVAPLLEA-LGIADYFSVVIGGDSLPNKKPDPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARA----AGCPSV 190 (226)
T ss_pred eCCCHHHHHHHHHH-cCCccCccEEEcCCCCCCCCcChHHHHHHHHHcCCChhheEEECCCHHHHHHHHH----CCCcEE
Confidence 99999999999996 99999999999865 3599999999999999999999999999999999998 899999
Q ss_pred EEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 235 LVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 235 ~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
+|.||+.+..++. ...|++++.++++|.+.|
T Consensus 191 ~v~~g~~~~~~~~--~~~~~~~i~~~~~l~~~l 221 (226)
T PRK13222 191 GVTYGYNYGEPIA--LSEPDVVIDHFAELLPLL 221 (226)
T ss_pred EECcCCCCccchh--hcCCCEEECCHHHHHHHH
Confidence 9999998766554 346889999999997765
No 16
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=99.97 E-value=2.7e-29 Score=218.52 Aligned_cols=204 Identities=16% Similarity=0.119 Sum_probs=149.8
Q ss_pred CCcEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhccccccc
Q 024375 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (268)
Q Consensus 1 m~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~ 80 (268)
|.++|+|||||||+||.+.+..+.+.+++.++ .+... .++++..+|...+..+ +.+...
T Consensus 6 ~~k~iiFD~DGTL~d~~~~~~~a~~~~~~~~g------~~~~~-------~~~~~~~~g~~~~~~~--~~~~~~------ 64 (222)
T PRK10826 6 QILAAIFDMDGLLIDSEPLWDRAELDVMASLG------VDISR-------REELPDTLGLRIDQVV--DLWYAR------ 64 (222)
T ss_pred cCcEEEEcCCCCCCcCHHHHHHHHHHHHHHCC------CCCCH-------HHHHHHhhCCCHHHHH--HHHHHh------
Confidence 35899999999999999999999999998884 22110 1234445554433322 111110
Q ss_pred ccccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEE
Q 024375 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (268)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~I 157 (268)
.++......+....+++.+.+. ......+|||+.++|+ ++|++++|
T Consensus 65 ---------------------------~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~g~~~~l~~l~~~g~~~~i 113 (222)
T PRK10826 65 ---------------------------QPWNGPSRQEVVQRIIARVISL----IEETRPLLPGVREALALCKAQGLKIGL 113 (222)
T ss_pred ---------------------------cCCCCCCHHHHHHHHHHHHHHH----HhcCCCCCCCHHHHHHHHHHCCCeEEE
Confidence 0000001112222333333222 1234689999999999 78999999
Q ss_pred EcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcE
Q 024375 158 VTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (268)
Q Consensus 158 vTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~ 233 (268)
+||+....++.++++ +|+..+|+.+++++ .||+|+++..+++++|++|++|+||||+.+|+++|++ ||+++
T Consensus 114 ~S~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~----aG~~~ 188 (222)
T PRK10826 114 ASASPLHMLEAVLTM-FDLRDYFDALASAEKLPYSKPHPEVYLNCAAKLGVDPLTCVALEDSFNGMIAAKA----ARMRS 188 (222)
T ss_pred EeCCcHHHHHHHHHh-CcchhcccEEEEcccCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCChhhHHHHHH----cCCEE
Confidence 999999999999996 99999999999875 3599999999999999999999999999999999999 89999
Q ss_pred EEEecCCCCHHHHHhcCCCCCeeecChhHHh
Q 024375 234 YLVDWGYNTPKERAEAASMPRIQLLQLSDFC 264 (268)
Q Consensus 234 i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~ 264 (268)
|+|.++....+... ..++.++.++.||.
T Consensus 189 i~v~~~~~~~~~~~---~~~~~~~~~~~dl~ 216 (222)
T PRK10826 189 IVVPAPEQQNDPRW---ALADVKLESLTELT 216 (222)
T ss_pred EEecCCccCchhhh---hhhheeccCHHHHh
Confidence 99999976543322 24789999999994
No 17
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=99.96 E-value=3e-29 Score=227.10 Aligned_cols=218 Identities=17% Similarity=0.153 Sum_probs=144.5
Q ss_pred cEEEEecCcccccCh-hHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhcccccccc
Q 024375 3 DLYALDFDGVICDSC-EETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (268)
Q Consensus 3 ~~vlFDlDGTLvDS~-~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~~ 81 (268)
++|||||||||+||. +.+..+++.++++++ ++..... ......++. +|.|...+. +.+...
T Consensus 41 k~VIFDlDGTLvDS~~~~~~~a~~~~l~~~G------~~~~~~~--~~~~~~~~~-~g~~~~~~~--~~~~~~------- 102 (286)
T PLN02779 41 EALLFDCDGVLVETERDGHRVAFNDAFKEFG------LRPVEWD--VELYDELLN-IGGGKERMT--WYFNEN------- 102 (286)
T ss_pred cEEEEeCceeEEccccHHHHHHHHHHHHHcC------CCCCCCC--HHHHHHHHc-cCCChHHHH--HHHHHc-------
Confidence 789999999999999 888899999999984 3110000 000112333 666654432 222110
Q ss_pred cccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccC-CCCCccHHHHHH---hCCCcEEE
Q 024375 82 SSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGA-NRLYPGVSDALK---LASSRIYI 157 (268)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~-~~lypGv~e~L~---~~g~~l~I 157 (268)
+....+. .....+++..++....+.+.+...|.+.+... .++|||+.++|+ ++|++++|
T Consensus 103 -----~~~~~~~------------~~~~~~~e~~~~~~~~~~~~~~~~y~~~~~~~~~~l~pGv~elL~~L~~~g~~l~I 165 (286)
T PLN02779 103 -----GWPTSTI------------EKAPKDEEERKELVDSLHDRKTELFKELIESGALPLRPGVLRLMDEALAAGIKVAV 165 (286)
T ss_pred -----CCCcccc------------ccCCccchhhHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHCCCeEEE
Confidence 0000000 00000111122222222222222222222222 489999999998 78999999
Q ss_pred EcCCchHHHHHHHHHhcCCC---CCCceEecCC---CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCC
Q 024375 158 VTSNQSRFVETLLRELAGVT---ITPDRLYGLG---TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGW 231 (268)
Q Consensus 158 vTnK~~~~~~~~L~~~~gl~---~~f~~i~g~~---~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi 231 (268)
+||++...+..+|+. ++.. .+|+.+.+.+ .||+|+++..++++++++|++|+||||+.+|+++|++ +|+
T Consensus 166 vTn~~~~~~~~~l~~-~~~~~~~~~~~~v~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~----aG~ 240 (286)
T PLN02779 166 CSTSNEKAVSKIVNT-LLGPERAQGLDVFAGDDVPKKKPDPDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKA----AGM 240 (286)
T ss_pred EeCCCHHHHHHHHHH-hccccccCceEEEeccccCCCCCCHHHHHHHHHHhCcChHHEEEEeCCHHhHHHHHH----cCC
Confidence 999999999999995 6433 3345553333 3599999999999999999999999999999999998 899
Q ss_pred cEEEEecCCCCHHHHHhcCCCCCeeecChhHHh
Q 024375 232 NLYLVDWGYNTPKERAEAASMPRIQLLQLSDFC 264 (268)
Q Consensus 232 ~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~ 264 (268)
++|+|.||+++.+++ ..|+++++++.++.
T Consensus 241 ~~i~v~~g~~~~~~l----~~ad~vi~~~~~l~ 269 (286)
T PLN02779 241 RCIVTKSSYTADEDF----SGADAVFDCLGDVP 269 (286)
T ss_pred EEEEEccCCcccccc----CCCcEEECChhhcc
Confidence 999999999887655 36889999998873
No 18
>PLN02940 riboflavin kinase
Probab=99.96 E-value=6.2e-29 Score=233.44 Aligned_cols=199 Identities=12% Similarity=0.063 Sum_probs=149.5
Q ss_pred cEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhccccccccc
Q 024375 3 DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRKS 82 (268)
Q Consensus 3 ~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~~~ 82 (268)
++|+|||||||+||.+.+..+++.++++++ .+.. .++++.++|......+ .+.+.
T Consensus 12 k~VIFDlDGTLvDt~~~~~~a~~~~~~~~G------~~~~--------~~~~~~~~G~~~~~~~-~~~~~---------- 66 (382)
T PLN02940 12 SHVILDLDGTLLNTDGIVSDVLKAFLVKYG------KQWD--------GREAQKIVGKTPLEAA-ATVVE---------- 66 (382)
T ss_pred CEEEECCcCcCCcCHHHHHHHHHHHHHHcC------CCCC--------HHHHHHhcCCCHHHHH-HHHHH----------
Confidence 689999999999999999999999999884 3211 1234556665443322 12221
Q ss_pred ccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEEEc
Q 024375 83 SVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVT 159 (268)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~IvT 159 (268)
.++++ ...++....+++.+.+. + ....+|||+.++|+ ++|++++|+|
T Consensus 67 ------------------------~~~~~-~~~~~~~~~~~~~~~~~----~-~~~~l~pGv~elL~~Lk~~g~~l~IvT 116 (382)
T PLN02940 67 ------------------------DYGLP-CSTDEFNSEITPLLSEQ----W-CNIKALPGANRLIKHLKSHGVPMALAS 116 (382)
T ss_pred ------------------------HhCCC-CCHHHHHHHHHHHHHHH----H-ccCCCCcCHHHHHHHHHHCCCcEEEEe
Confidence 11111 00111222333333322 1 24689999999999 7999999999
Q ss_pred CCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEE
Q 024375 160 SNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYL 235 (268)
Q Consensus 160 nK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~ 235 (268)
|+++..++..|+.++|+..+|+.|++++ .||+|+++..++++++++|++|+|||||..|+++|++ ||+++|+
T Consensus 117 n~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~----aGi~~I~ 192 (382)
T PLN02940 117 NSPRANIEAKISCHQGWKESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKA----AGMEVIA 192 (382)
T ss_pred CCcHHHHHHHHHhccChHhhCCEEEehhhcCCCCCCHHHHHHHHHHcCCChhHEEEEeCCHHHHHHHHH----cCCEEEE
Confidence 9999999998872389999999999876 3599999999999999999999999999999999998 8999999
Q ss_pred EecCCCCHHHHHhcCCCCCeeecChhHHh
Q 024375 236 VDWGYNTPKERAEAASMPRIQLLQLSDFC 264 (268)
Q Consensus 236 v~wGy~~~~el~~~~~~P~~~~~~~~~~~ 264 (268)
|.||+.... . ...|++++.++++|.
T Consensus 193 v~~g~~~~~--~--~~~ad~~i~sl~el~ 217 (382)
T PLN02940 193 VPSIPKQTH--L--YSSADEVINSLLDLQ 217 (382)
T ss_pred ECCCCcchh--h--ccCccEEeCCHhHcC
Confidence 999976542 2 246889999999985
No 19
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=99.96 E-value=6.8e-29 Score=238.26 Aligned_cols=207 Identities=16% Similarity=0.223 Sum_probs=150.8
Q ss_pred CCcEEEEecCcccccChhHHHHHHHHHHHHhCC-CCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhcccccc
Q 024375 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWP-SLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSL 79 (268)
Q Consensus 1 m~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~-~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~ 79 (268)
|.++|||||||||+||.+.+..++++++++++. ......+ ..+.++.++|....... .+.+ .
T Consensus 240 m~k~vIFDlDGTLiDs~~~~~~a~~~~~~~~~~~~~~~~~~---------~~~~~~~~~G~~~~~~~-~~l~-~------ 302 (459)
T PRK06698 240 MLQALIFDMDGTLFQTDKILELSLDDTFDHLRSLQLWDTVT---------PIDKYREIMGVPLPKVW-EALL-P------ 302 (459)
T ss_pred hhhheeEccCCceecchhHHHHHHHHHHHHHhhhcccCCCC---------CHHHHHHHcCCChHHHH-HHHh-h------
Confidence 568999999999999999999999999999831 1000011 11345555665543322 1111 0
Q ss_pred cccccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEE
Q 024375 80 RKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIY 156 (268)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~ 156 (268)
..+ .+..++....|++.|.+.. .....++|||+.++|+ ++|++++
T Consensus 303 ---------------------------~~~--~~~~~~~~~~~~~~~~~~~---~~~~~~l~pG~~e~L~~Lk~~g~~l~ 350 (459)
T PRK06698 303 ---------------------------DHS--LEIREQTDAYFLERLIENI---KSGKGALYPNVKEIFTYIKENNCSIY 350 (459)
T ss_pred ---------------------------hcc--hhHHHHHHHHHHHHhHHHH---hhcCCCcCCCHHHHHHHHHHCCCeEE
Confidence 000 1111112222333332211 1234689999999998 7899999
Q ss_pred EEcCCchHHHHHHHHHhcCCCCCCceEecCCC---CCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcE
Q 024375 157 IVTSNQSRFVETLLRELAGVTITPDRLYGLGT---GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (268)
Q Consensus 157 IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~---~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~ 233 (268)
|+||++...+..+|++ +|+..||+.+++.+. +|||+++..++++++ |++|+||||+.+|+++|++ ||+++
T Consensus 351 IvS~~~~~~~~~~l~~-~~l~~~f~~i~~~d~v~~~~kP~~~~~al~~l~--~~~~v~VGDs~~Di~aAk~----AG~~~ 423 (459)
T PRK06698 351 IASNGLTEYLRAIVSY-YDLDQWVTETFSIEQINSLNKSDLVKSILNKYD--IKEAAVVGDRLSDINAAKD----NGLIA 423 (459)
T ss_pred EEeCCchHHHHHHHHH-CCcHhhcceeEecCCCCCCCCcHHHHHHHHhcC--cceEEEEeCCHHHHHHHHH----CCCeE
Confidence 9999999999999995 999999999998762 489999999998864 6899999999999999999 89999
Q ss_pred EEEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 234 YLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 234 i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
|+|.||++..+++ ..|++++.++++|...|
T Consensus 424 I~v~~~~~~~~~~----~~~d~~i~~l~el~~~l 453 (459)
T PRK06698 424 IGCNFDFAQEDEL----AQADIVIDDLLELKGIL 453 (459)
T ss_pred EEEeCCCCccccc----CCCCEEeCCHHHHHHHH
Confidence 9999999765543 25899999999997765
No 20
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=99.96 E-value=1.9e-28 Score=212.19 Aligned_cols=121 Identities=21% Similarity=0.235 Sum_probs=106.5
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcE
Q 024375 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRL 209 (268)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~ 209 (268)
...+|||+.++|+ ++|++++|+||++...+...|++ +|+..||+.|++++ .||+|+++..+++++|++|+++
T Consensus 92 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~-~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~ 170 (221)
T TIGR02253 92 YLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLER-LGVRDFFDAVITSEEEGVEKPHPKIFYAALKRLGVKPEEA 170 (221)
T ss_pred hCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHh-CChHHhccEEEEeccCCCCCCCHHHHHHHHHHcCCChhhE
Confidence 3589999999999 68999999999999999999996 99999999999764 3599999999999999999999
Q ss_pred EEEcCcH-hhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHH
Q 024375 210 HFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDF 263 (268)
Q Consensus 210 ~~VGDs~-~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~ 263 (268)
+|||||. +|+++|++ +|+++|+|.||+....+.. ....|++.+.++.+|
T Consensus 171 ~~igDs~~~di~~A~~----aG~~~i~~~~~~~~~~~~~-~~~~~~~~i~~~~el 220 (221)
T TIGR02253 171 VMVGDRLDKDIKGAKN----LGMKTVWINQGKSSKMEDD-VYPYPDYEISSLREL 220 (221)
T ss_pred EEECCChHHHHHHHHH----CCCEEEEECCCCCcccccc-cccCCCeeeCcHHhh
Confidence 9999998 89999999 8999999999987543322 234688999999876
No 21
>PHA02597 30.2 hypothetical protein; Provisional
Probab=99.96 E-value=9.4e-29 Score=211.18 Aligned_cols=187 Identities=14% Similarity=0.089 Sum_probs=134.5
Q ss_pred CCcEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhccccccc
Q 024375 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (268)
Q Consensus 1 m~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~ 80 (268)
|.++|+|||||||+|+. .+++.+++++ |++ .++++..+|.+....+ ...
T Consensus 1 m~k~viFDlDGTLiD~~----~~~~~~~~~~------g~~----------~~~~~~~~g~~~~~~~-~~~---------- 49 (197)
T PHA02597 1 MKPTILTDVDGVLLSWQ----SGLPYFAQKY------NIP----------TDHILKMIQDERFRDP-GEL---------- 49 (197)
T ss_pred CCcEEEEecCCceEchh----hccHHHHHhc------CCC----------HHHHHHHHhHhhhcCH-HHH----------
Confidence 88999999999999954 4566777777 333 1244555554322211 011
Q ss_pred ccccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH--hCCCcEEEE
Q 024375 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK--LASSRIYIV 158 (268)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~--~~g~~l~Iv 158 (268)
++.+.+++.+.+..|++ ..+.....+|||+.++|+ +++++++++
T Consensus 50 ---------------------------~~~~~~~~~~~~~~~~~-------~~~~~~~~~~pG~~e~L~~L~~~~~~~i~ 95 (197)
T PHA02597 50 ---------------------------FGCDQELAKKLIEKYNN-------SDFIRYLSAYDDALDVINKLKEDYDFVAV 95 (197)
T ss_pred ---------------------------hcccHHHHHHHhhhhhH-------HHHHHhccCCCCHHHHHHHHHhcCCEEEE
Confidence 11122333333333332 123344679999999999 445689999
Q ss_pred cCCchHHHHHHHHHhcCCCC----CCceEecCC-CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccC--CC
Q 024375 159 TSNQSRFVETLLRELAGVTI----TPDRLYGLG-TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELD--GW 231 (268)
Q Consensus 159 TnK~~~~~~~~L~~~~gl~~----~f~~i~g~~-~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~a--gi 231 (268)
||++.......++. +++.. +|+.++|.+ .+|||+++..+++++| |++++|||||.+|+++|++ | ||
T Consensus 96 Tn~~~~~~~~~~~~-~~l~~~f~~~f~~i~~~~~~~~kp~~~~~a~~~~~--~~~~v~vgDs~~di~aA~~----a~~Gi 168 (197)
T PHA02597 96 TALGDSIDALLNRQ-FNLNALFPGAFSEVLMCGHDESKEKLFIKAKEKYG--DRVVCFVDDLAHNLDAAHE----ALSQL 168 (197)
T ss_pred eCCccchhHHHHhh-CCHHHhCCCcccEEEEeccCcccHHHHHHHHHHhC--CCcEEEeCCCHHHHHHHHH----HHcCC
Confidence 99988877777774 87764 567787765 4599999999999999 8889999999999999998 8 99
Q ss_pred cEEEEecCCCCHHHHHhcCCCCCeeecChhHHhh
Q 024375 232 NLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCT 265 (268)
Q Consensus 232 ~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~ 265 (268)
++|+|.||+. ...+.|.+.+.+++++.+
T Consensus 169 ~~i~~~~~~~------~~~~~~~~~~~~~~~~~~ 196 (197)
T PHA02597 169 PVIHMLRGER------DHIPKLAHRVKSWNDIEN 196 (197)
T ss_pred cEEEecchhh------ccccchhhhhccHHHHhc
Confidence 9999999975 345678899999999865
No 22
>PRK09449 dUMP phosphatase; Provisional
Probab=99.96 E-value=6.6e-28 Score=209.55 Aligned_cols=122 Identities=19% Similarity=0.221 Sum_probs=105.8
Q ss_pred CCCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCC-CCcE
Q 024375 137 ANRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQ-GLRL 209 (268)
Q Consensus 137 ~~~lypGv~e~L~--~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~-~~~~ 209 (268)
...+|||+.++|+ ++|++++|+||++...++..|++ +|+..+|+.|++++ .||+|+++..+++++|+. +++|
T Consensus 93 ~~~~~~g~~~~L~~L~~~~~~~i~Tn~~~~~~~~~l~~-~~l~~~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~ 171 (224)
T PRK09449 93 ICTPLPGAVELLNALRGKVKMGIITNGFTELQQVRLER-TGLRDYFDLLVISEQVGVAKPDVAIFDYALEQMGNPDRSRV 171 (224)
T ss_pred cCccCccHHHHHHHHHhCCeEEEEeCCcHHHHHHHHHh-CChHHHcCEEEEECccCCCCCCHHHHHHHHHHcCCCCcccE
Confidence 3579999999999 77899999999999999999996 99999999999865 359999999999999975 4799
Q ss_pred EEEcCcH-hhHHHhhccCccCCCcEEEEecC-CCCHHHHHhcCCCCCeeecChhHHhhhcC
Q 024375 210 HFVEDRL-ATLKNVIKEPELDGWNLYLVDWG-YNTPKERAEAASMPRIQLLQLSDFCTKLK 268 (268)
Q Consensus 210 ~~VGDs~-~Di~aa~~~~~~agi~~i~v~wG-y~~~~el~~~~~~P~~~~~~~~~~~~~~~ 268 (268)
+||||+. +|+++|++ +|+++|++.|+ +... . ...|++.+.++++|...||
T Consensus 172 ~~vgD~~~~Di~~A~~----aG~~~i~~~~~~~~~~---~--~~~~~~~i~~~~el~~~l~ 223 (224)
T PRK09449 172 LMVGDNLHSDILGGIN----AGIDTCWLNAHGREQP---E--GIAPTYQVSSLSELEQLLC 223 (224)
T ss_pred EEEcCCcHHHHHHHHH----CCCcEEEECCCCCCCC---C--CCCCeEEECCHHHHHHHHh
Confidence 9999998 69999998 89999999854 3221 1 2368999999999988775
No 23
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=99.96 E-value=2.5e-27 Score=204.97 Aligned_cols=121 Identities=17% Similarity=0.270 Sum_probs=107.8
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcC-CCCCCc
Q 024375 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKP-EHQGLR 208 (268)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l-~~~~~~ 208 (268)
..++|||+.++|+ ++ ++++|+||+....++.+|++ +|+..+|+.|++++ .||+|+++..+++++ +++|++
T Consensus 95 ~~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~-~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~ 172 (224)
T TIGR02254 95 GHQLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRK-SGLFPFFDDIFVSEDAGIQKPDKEIFNYALERMPKFSKEE 172 (224)
T ss_pred cCeeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHH-CCcHhhcCEEEEcCccCCCCCCHHHHHHHHHHhcCCCchh
Confidence 3589999999999 45 99999999999999999996 99999999999865 259999999999999 999999
Q ss_pred EEEEcCcH-hhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 209 LHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 209 ~~~VGDs~-~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
|+||||+. +|+++|++ +|+++|++.||+... . ....|++++.++++|.+.|
T Consensus 173 ~v~igD~~~~di~~A~~----~G~~~i~~~~~~~~~--~--~~~~~~~~~~~~~el~~~~ 224 (224)
T TIGR02254 173 VLMIGDSLTADIKGGQN----AGLDTCWMNPDMHPN--P--DDIIPTYEIRSLEELYEIL 224 (224)
T ss_pred eEEECCCcHHHHHHHHH----CCCcEEEECCCCCCC--C--CCCCCceEECCHHHHHhhC
Confidence 99999998 79999998 899999999997653 1 2357899999999998764
No 24
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=99.96 E-value=3.3e-28 Score=211.19 Aligned_cols=203 Identities=12% Similarity=0.052 Sum_probs=142.5
Q ss_pred CcEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhcccccccc
Q 024375 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (268)
Q Consensus 2 ~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~~ 81 (268)
.++|+|||||||+||.+.+..+.+.++++++ ++.. .+ +..+.+.|....... +.+
T Consensus 4 ~~~viFD~DGTL~d~~~~~~~a~~~~~~~~g------~~~~-~~------~~~~~~~g~~~~~~~--~~~---------- 58 (221)
T PRK10563 4 IEAVFFDCDGTLVDSEVICSRAYVTMFAEFG------ITLS-LE------EVFKRFKGVKLYEII--DII---------- 58 (221)
T ss_pred CCEEEECCCCCCCCChHHHHHHHHHHHHHcC------CCCC-HH------HHHHHhcCCCHHHHH--HHH----------
Confidence 4899999999999999999999999998883 3211 11 112233333222211 111
Q ss_pred cccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHHhCCCcEEEEcCC
Q 024375 82 SSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVTSN 161 (268)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~~~g~~l~IvTnK 161 (268)
.+.+++.. ..++....|++.+.+.+ .....+||||.++|+.-+++++|+||+
T Consensus 59 -----------------------~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~~~~gv~~~L~~L~~~~~ivTn~ 110 (221)
T PRK10563 59 -----------------------SKEHGVTL-AKAELEPVYRAEVARLF----DSELEPIAGANALLESITVPMCVVSNG 110 (221)
T ss_pred -----------------------HHHhCCCC-CHHHHHHHHHHHHHHHH----HccCCcCCCHHHHHHHcCCCEEEEeCC
Confidence 11222211 01112223344333221 234689999999999667999999999
Q ss_pred chHHHHHHHHHhcCCCCCCc-eEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEE
Q 024375 162 QSRFVETLLRELAGVTITPD-RLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLV 236 (268)
Q Consensus 162 ~~~~~~~~L~~~~gl~~~f~-~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v 236 (268)
+...+...|++ +|+..+|+ .|++++ .||+|+++..++++++++|++|+||||+..||++|++ +|+++|++
T Consensus 111 ~~~~~~~~l~~-~~l~~~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~----aG~~~i~~ 185 (221)
T PRK10563 111 PVSKMQHSLGK-TGMLHYFPDKLFSGYDIQRWKPDPALMFHAAEAMNVNVENCILVDDSSAGAQSGIA----AGMEVFYF 185 (221)
T ss_pred cHHHHHHHHHh-cChHHhCcceEeeHHhcCCCCCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHH----CCCEEEEE
Confidence 99999999996 99999995 666653 3599999999999999999999999999999999998 89999999
Q ss_pred ecCCCCHHHHHhcCCCCCeeecChhHHhhh
Q 024375 237 DWGYNTPKERAEAASMPRIQLLQLSDFCTK 266 (268)
Q Consensus 237 ~wGy~~~~el~~~~~~P~~~~~~~~~~~~~ 266 (268)
.++.++.. .. ..|+.++.++.+|...
T Consensus 186 ~~~~~~~~-~~---~~~~~~~~~~~~l~~~ 211 (221)
T PRK10563 186 CADPHNKP-ID---HPLVTTFTDLAQLPEL 211 (221)
T ss_pred CCCCCCcc-hh---hhhhHHHHHHHHHHHH
Confidence 87665432 22 2345567888887654
No 25
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=99.95 E-value=1.1e-27 Score=211.25 Aligned_cols=221 Identities=11% Similarity=0.089 Sum_probs=145.5
Q ss_pred cEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhccccccccc
Q 024375 3 DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRKS 82 (268)
Q Consensus 3 ~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~~~ 82 (268)
++|+|||||||+||.+.+..+.+.+++.+....+ ++..... ...+.++..++.....
T Consensus 11 k~iiFDlDGTL~D~~~~~~~a~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~------------------ 67 (238)
T PRK10748 11 SALTFDLDDTLYDNRPVILRTEQEALAFVQNYHP-ALRSFQN----EDLQRLRQALREAEPE------------------ 67 (238)
T ss_pred eeEEEcCcccccCChHHHHHHHHHHHHHHHHhCc-chhhCCH----HHHHHHHHHHHHhCch------------------
Confidence 7899999999999999999999988876620000 0100000 0011111111110000
Q ss_pred ccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH--hCCCcEEEEcC
Q 024375 83 SVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK--LASSRIYIVTS 160 (268)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~--~~g~~l~IvTn 160 (268)
. ...+..........+++.+|++.+..+.....+...|.. |.....+|||+.++|+ +++++++|+||
T Consensus 68 ----~--~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~gv~~~L~~L~~~~~l~i~Tn 136 (238)
T PRK10748 68 ----I--YHDVTRWRWRAIEQAMLDAGLSAEEASAGADAAMINFAK-----WRSRIDVPQATHDTLKQLAKKWPLVAITN 136 (238)
T ss_pred ----h--hCcHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH-----HhhcCCCCccHHHHHHHHHcCCCEEEEEC
Confidence 0 000101111122345566777655443333333333322 2234689999999999 66799999999
Q ss_pred CchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCc-HhhHHHhhccCccCCCcEEE
Q 024375 161 NQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDR-LATLKNVIKEPELDGWNLYL 235 (268)
Q Consensus 161 K~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs-~~Di~aa~~~~~~agi~~i~ 235 (268)
++.. +++ +|+..||+.|++++ .||+|+++..++++++++|++|+||||+ .+|+.+|++ +|+++|+
T Consensus 137 ~~~~-----~~~-~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~----aG~~~i~ 206 (238)
T PRK10748 137 GNAQ-----PEL-FGLGDYFEFVLRAGPHGRSKPFSDMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIR----CGMQACW 206 (238)
T ss_pred CCch-----HHH-CCcHHhhceeEecccCCcCCCcHHHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHH----CCCeEEE
Confidence 8876 474 99999999999875 3599999999999999999999999999 599999998 8999999
Q ss_pred EecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 236 VDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 236 v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
|..+.+...........|+..+.++++|...|
T Consensus 207 v~~~~~~~~~~~~~~~~p~~~i~~l~el~~~~ 238 (238)
T PRK10748 207 INPENGDLMQTWDSRLLPHIEISRLASLTSLI 238 (238)
T ss_pred EcCCCccccccccccCCCCEEECCHHHHHhhC
Confidence 98765432111111246999999999998765
No 26
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=99.95 E-value=1.1e-27 Score=201.65 Aligned_cols=178 Identities=17% Similarity=0.150 Sum_probs=129.0
Q ss_pred EEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhcccccccccc
Q 024375 4 LYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRKSS 83 (268)
Q Consensus 4 ~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~~~~ 83 (268)
+|+|||||||+||.+.+..+++.+++.++ ++.. .+..+.+.|.+....+ .+.+...
T Consensus 1 ~iiFD~DGTL~ds~~~~~~~~~~~~~~~g------~~~~--------~~~~~~~~g~~~~~~~-~~~~~~~--------- 56 (185)
T TIGR01990 1 AVIFDLDGVITDTAEYHYLAWKALADELG------IPFD--------EEFNESLKGVSREDSL-ERILDLG--------- 56 (185)
T ss_pred CeEEcCCCccccChHHHHHHHHHHHHHcC------CCCC--------HHHHHHhcCCChHHHH-HHHHHhc---------
Confidence 58999999999999999999999998883 3311 1223344454433322 1222110
Q ss_pred cccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEEEcC
Q 024375 84 VAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVTS 160 (268)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~IvTn 160 (268)
+. .+++++.++....+.+.|.+.+.. .....+||||.++|+ ++|++++|+||
T Consensus 57 ---~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~pg~~~~L~~L~~~g~~~~i~s~ 111 (185)
T TIGR01990 57 ---GK--------------------KYSEEEKEELAERKNDYYVELLKE--LTPADVLPGIKNLLDDLKKNNIKIALASA 111 (185)
T ss_pred ---CC--------------------CCCHHHHHHHHHHHHHHHHHHHHh--cCCcccCccHHHHHHHHHHCCCeEEEEeC
Confidence 10 113333444444444444433221 123579999999999 79999999999
Q ss_pred CchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEE
Q 024375 161 NQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLV 236 (268)
Q Consensus 161 K~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v 236 (268)
+.. ....|++ +|+..+|+.+++++ .||+|+++..++++++++|++|+||||+.+|+++|++ +|+++|+|
T Consensus 112 ~~~--~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~----aG~~~i~v 184 (185)
T TIGR01990 112 SKN--APTVLEK-LGLIDYFDAIVDPAEIKKGKPDPEIFLAAAEGLGVSPSECIGIEDAQAGIEAIKA----AGMFAVGV 184 (185)
T ss_pred Ccc--HHHHHHh-cCcHhhCcEEEehhhcCCCCCChHHHHHHHHHcCCCHHHeEEEecCHHHHHHHHH----cCCEEEec
Confidence 754 4678996 99999999999765 3599999999999999999999999999999999999 89999998
Q ss_pred e
Q 024375 237 D 237 (268)
Q Consensus 237 ~ 237 (268)
+
T Consensus 185 ~ 185 (185)
T TIGR01990 185 G 185 (185)
T ss_pred C
Confidence 4
No 27
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=99.95 E-value=1.6e-27 Score=200.59 Aligned_cols=176 Identities=16% Similarity=0.134 Sum_probs=130.5
Q ss_pred CcEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhcccccccc
Q 024375 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (268)
Q Consensus 2 ~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~~ 81 (268)
.++|+|||||||+||.+....+++.++++++ ++.. .+....+.|......+ ...+
T Consensus 1 ~~~iiFD~DGTL~ds~~~~~~~~~~~~~~~g------~~~~--------~~~~~~~~g~~~~~~~-~~~~---------- 55 (185)
T TIGR02009 1 YKAVIFDMDGVIVDTAPLHAQAWKHLADKYG------IEFD--------KQYNTSLGGLSREDIL-RAIL---------- 55 (185)
T ss_pred CCeEEEcCCCcccCChHHHHHHHHHHHHHcC------CCCC--------HHHHHHcCCCCHHHHH-HHHH----------
Confidence 3789999999999999999999999998884 3210 1122333443322221 1111
Q ss_pred cccccCCcHHHHHhhhhhhhHHHHHhh--CCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEE
Q 024375 82 SSVAEGLTVEGILENWLKIKPVIMEEW--SENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIY 156 (268)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~ 156 (268)
+.+ +++++++.+....+.+.|.+..+ .....+|||+.++|+ ++|++++
T Consensus 56 ------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~~~l~~l~~~g~~i~ 108 (185)
T TIGR02009 56 ------------------------KLRKPGLSLETIHQLAERKNELYRELLR---LTGAEVLPGIENFLKRLKKKGIAVG 108 (185)
T ss_pred ------------------------HhcCCCCCHHHHHHHHHHHHHHHHHHHh---ccCCCCCcCHHHHHHHHHHcCCeEE
Confidence 111 23444444444444444433221 124689999999998 7899999
Q ss_pred EEcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCc
Q 024375 157 IVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWN 232 (268)
Q Consensus 157 IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~ 232 (268)
|+||+ ..++.+|++ +|+..+|+.++|++ .||+|+++..++++++++|++++||||+..|+++|++ +|++
T Consensus 109 i~S~~--~~~~~~l~~-~~l~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~----~G~~ 181 (185)
T TIGR02009 109 LGSSS--KNADRILAK-LGLTDYFDAIVDADEVKEGKPHPETFLLAAELLGVSPNECVVFEDALAGVQAARA----AGMF 181 (185)
T ss_pred EEeCc--hhHHHHHHH-cChHHHCCEeeehhhCCCCCCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHH----CCCe
Confidence 99999 678999996 99999999999865 3499999999999999999999999999999999999 8999
Q ss_pred EEEE
Q 024375 233 LYLV 236 (268)
Q Consensus 233 ~i~v 236 (268)
+|+|
T Consensus 182 ~i~v 185 (185)
T TIGR02009 182 AVAV 185 (185)
T ss_pred EeeC
Confidence 9986
No 28
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=99.95 E-value=1.3e-27 Score=202.08 Aligned_cols=173 Identities=13% Similarity=0.073 Sum_probs=126.0
Q ss_pred cEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhccccccccc
Q 024375 3 DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRKS 82 (268)
Q Consensus 3 ~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~~~ 82 (268)
++|+|||||||+||.+.+..+++.++++++ ++.. .++++.+.|......+ +.+..
T Consensus 6 ~~viFD~DGTLiDs~~~~~~a~~~~~~~~g------~~~~--------~~~~~~~~g~~~~~~~--~~~~~--------- 60 (188)
T PRK10725 6 AGLIFDMDGTILDTEPTHRKAWREVLGRYG------LQFD--------EQAMVALNGSPTWRIA--QAIIE--------- 60 (188)
T ss_pred eEEEEcCCCcCccCHHHHHHHHHHHHHHcC------CCCC--------HHHHHHhcCCCHHHHH--HHHHH---------
Confidence 789999999999999999999999999984 3210 1233444554332221 11111
Q ss_pred ccccCCcHHHHHhhhhhhhHHHHHhhC--CCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH--hCCCcEEEE
Q 024375 83 SVAEGLTVEGILENWLKIKPVIMEEWS--ENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK--LASSRIYIV 158 (268)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~--~~g~~l~Iv 158 (268)
.++ ++.+++... +...|.+. ......+|||+ ++|+ +++++++|+
T Consensus 61 ------------------------~~~~~~~~~~~~~~---~~~~~~~~----~~~~~~~~~~~-e~L~~L~~~~~l~I~ 108 (188)
T PRK10725 61 ------------------------LNQADLDPHALARE---KTEAVKSM----LLDSVEPLPLI-EVVKAWHGRRPMAVG 108 (188)
T ss_pred ------------------------HhCCCCCHHHHHHH---HHHHHHHH----HhccCCCccHH-HHHHHHHhCCCEEEE
Confidence 111 111221111 11122111 12335789975 7887 566999999
Q ss_pred cCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEE
Q 024375 159 TSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 234 (268)
Q Consensus 159 TnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i 234 (268)
||+++..++..|++ +|+..||+.|++++ .||+|+++..++++++++|++|+||||+.+|+++|++ +|+++|
T Consensus 109 T~~~~~~~~~~l~~-~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~igDs~~di~aA~~----aG~~~i 183 (188)
T PRK10725 109 TGSESAIAEALLAH-LGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQCVVFEDADFGIQAARA----AGMDAV 183 (188)
T ss_pred cCCchHHHHHHHHh-CCcHhHceEEEehhhccCCCCChHHHHHHHHHcCCCHHHeEEEeccHhhHHHHHH----CCCEEE
Confidence 99999999999996 99999999999875 3599999999999999999999999999999999999 899999
Q ss_pred EEe
Q 024375 235 LVD 237 (268)
Q Consensus 235 ~v~ 237 (268)
+|.
T Consensus 184 ~~~ 186 (188)
T PRK10725 184 DVR 186 (188)
T ss_pred eec
Confidence 985
No 29
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.94 E-value=3.4e-26 Score=237.75 Aligned_cols=202 Identities=16% Similarity=0.168 Sum_probs=149.7
Q ss_pred cEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhccccccccc
Q 024375 3 DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRKS 82 (268)
Q Consensus 3 ~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~~~ 82 (268)
++|+|||||||+||.+.+..+++.++++++ ++.. .++++.++|.+....+ +.+..
T Consensus 76 kaVIFDlDGTLiDS~~~~~~a~~~~~~~~G------~~it--------~e~~~~~~G~~~~~~~--~~~~~--------- 130 (1057)
T PLN02919 76 SAVLFDMDGVLCNSEEPSRRAAVDVFAEMG------VEVT--------VEDFVPFMGTGEANFL--GGVAS--------- 130 (1057)
T ss_pred CEEEECCCCCeEeChHHHHHHHHHHHHHcC------CCCC--------HHHHHHHhCCCHHHHH--HHHHH---------
Confidence 789999999999999999999999999983 3311 1234555565433321 11110
Q ss_pred ccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEEEc
Q 024375 83 SVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVT 159 (268)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~IvT 159 (268)
.+++.....++..+.+.+.|.+.|... ....+|||+.++|+ ++|++++|+|
T Consensus 131 ------------------------~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~pG~~elL~~Lk~~G~~l~IvS 184 (1057)
T PLN02919 131 ------------------------VKGVKGFDPDAAKKRFFEIYLEKYAKP--NSGIGFPGALELITQCKNKGLKVAVAS 184 (1057)
T ss_pred ------------------------hcCCCCCCHHHHHHHHHHHHHHHhhhc--ccCccCccHHHHHHHHHhCCCeEEEEe
Confidence 111100000111222233333322211 12358999999999 7999999999
Q ss_pred CCchHHHHHHHHHhcCCC-CCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEE
Q 024375 160 SNQSRFVETLLRELAGVT-ITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 234 (268)
Q Consensus 160 nK~~~~~~~~L~~~~gl~-~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i 234 (268)
|+....++..|++ +|+. .||+.|++.+ .||+|+++.+++++++++|++|+||||+..|+++|++ +|+++|
T Consensus 185 n~~~~~~~~~L~~-~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~----aGm~~I 259 (1057)
T PLN02919 185 SADRIKVDANLAA-AGLPLSMFDAIVSADAFENLKPAPDIFLAAAKILGVPTSECVVIEDALAGVQAARA----AGMRCI 259 (1057)
T ss_pred CCcHHHHHHHHHH-cCCChhHCCEEEECcccccCCCCHHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHH----cCCEEE
Confidence 9999999999996 9996 7899999876 2599999999999999999999999999999999998 899999
Q ss_pred EEecCCCCHHHHHhcCCCCCeeecChhHH
Q 024375 235 LVDWGYNTPKERAEAASMPRIQLLQLSDF 263 (268)
Q Consensus 235 ~v~wGy~~~~el~~~~~~P~~~~~~~~~~ 263 (268)
+|.||+ ..+++..+ .|++++.++.++
T Consensus 260 ~v~~~~-~~~~L~~~--~a~~vi~~l~el 285 (1057)
T PLN02919 260 AVTTTL-SEEILKDA--GPSLIRKDIGNI 285 (1057)
T ss_pred EECCCC-CHHHHhhC--CCCEEECChHHC
Confidence 999997 56677764 588999999987
No 30
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=99.94 E-value=7.9e-26 Score=197.57 Aligned_cols=205 Identities=18% Similarity=0.171 Sum_probs=143.0
Q ss_pred CCcEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhccccccc
Q 024375 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (268)
Q Consensus 1 m~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~ 80 (268)
|.++||||||||||||.+-...++..++++++ ++.. .+..+...|.+....+ +.+.....
T Consensus 1 ~~~avIFD~DGvLvDse~~~~~a~~~~~~~~g------~~~~--------~~~~~~~~g~~~~~~~--~~~~~~~~---- 60 (221)
T COG0637 1 MIKAVIFDMDGTLVDSEPLHARAWLEALKEYG------IEIS--------DEEIRELHGGGIARII--DLLRKLAA---- 60 (221)
T ss_pred CCcEEEEcCCCCcCcchHHHHHHHHHHHHHcC------CCCC--------HHHHHHHHCCChHHHH--HHHHHHhc----
Confidence 67999999999999999999999999999994 3311 1234444453322221 22211000
Q ss_pred ccccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEE
Q 024375 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (268)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~I 157 (268)
+... ....... ..++.... .......++|||.++|+ ++|+++++
T Consensus 61 ------~~~~-------------------~~~~~~~---~~~~~~~~-----~~~~~~~~~pGv~~~l~~L~~~~i~~av 107 (221)
T COG0637 61 ------GEDP-------------------ADLAELE---RLLYEAEA-----LELEGLKPIPGVVELLEQLKARGIPLAV 107 (221)
T ss_pred ------CCcc-------------------cCHHHHH---HHHHHHHH-----hhhcCCCCCccHHHHHHHHHhcCCcEEE
Confidence 0000 0000000 01111111 11344689999999999 68899999
Q ss_pred EcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcE
Q 024375 158 VTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (268)
Q Consensus 158 vTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~ 233 (268)
+||.++..++.+|+. .|+..||+.++.++ .||+|++++.+.++||+.|++||.|+||.+.|+||++ ||+.+
T Consensus 108 aS~s~~~~~~~~L~~-~gl~~~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~a----AGm~v 182 (221)
T COG0637 108 ASSSPRRAAERVLAR-LGLLDYFDVIVTADDVARGKPAPDIYLLAAERLGVDPEECVVVEDSPAGIQAAKA----AGMRV 182 (221)
T ss_pred ecCChHHHHHHHHHH-ccChhhcchhccHHHHhcCCCCCHHHHHHHHHcCCChHHeEEEecchhHHHHHHH----CCCEE
Confidence 999999999999996 99999999988754 4699999999999999999999999999999999998 89999
Q ss_pred EEEecCCCCH--HHHHhcCCCCCeeecChhHHhh
Q 024375 234 YLVDWGYNTP--KERAEAASMPRIQLLQLSDFCT 265 (268)
Q Consensus 234 i~v~wGy~~~--~el~~~~~~P~~~~~~~~~~~~ 265 (268)
|++.-+.... ..+.. .-.+..+.++.++..
T Consensus 183 v~v~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~ 214 (221)
T COG0637 183 VGVPAGHDRPHLDPLDA--HGADTVLLDLAELPA 214 (221)
T ss_pred EEecCCCCccccchhhh--hhcchhhccHHHHHH
Confidence 9999855432 22222 234566677776654
No 31
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=99.93 E-value=1.3e-25 Score=189.69 Aligned_cols=95 Identities=16% Similarity=0.189 Sum_probs=86.4
Q ss_pred CCCCCccHHHHHHhCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC---C-----CCcHHHHHHHHhcCCCCCCc
Q 024375 137 ANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG---T-----GPKVNVLKQLQKKPEHQGLR 208 (268)
Q Consensus 137 ~~~lypGv~e~L~~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~---~-----~pkp~~l~~~~~~l~~~~~~ 208 (268)
...+|||+.++|+.-.++++|+||++...+...|++ +|+..+|+.|++++ . ||+|+++..+++++|++|++
T Consensus 82 ~~~~~~g~~~~L~~L~~~~~i~Tn~~~~~~~~~l~~-~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~ 160 (184)
T TIGR01993 82 KLKPDPELRNLLLRLPGRKIIFTNGDRAHARRALNR-LGIEDCFDGIFCFDTANPDYLLPKPSPQAYEKALREAGVDPER 160 (184)
T ss_pred hCCCCHHHHHHHHhCCCCEEEEeCCCHHHHHHHHHH-cCcHhhhCeEEEeecccCccCCCCCCHHHHHHHHHHhCCCccc
Confidence 457999999999943368999999999999999996 99999999999864 2 79999999999999999999
Q ss_pred EEEEcCcHhhHHHhhccCccCCCcEEEE
Q 024375 209 LHFVEDRLATLKNVIKEPELDGWNLYLV 236 (268)
Q Consensus 209 ~~~VGDs~~Di~aa~~~~~~agi~~i~v 236 (268)
|+||||+..|+++|++ +|+++|+|
T Consensus 161 ~l~vgD~~~di~aA~~----~G~~~i~v 184 (184)
T TIGR01993 161 AIFFDDSARNIAAAKA----LGMKTVLV 184 (184)
T ss_pred eEEEeCCHHHHHHHHH----cCCEEeeC
Confidence 9999999999999999 89999875
No 32
>PLN02811 hydrolase
Probab=99.93 E-value=2.5e-25 Score=193.65 Aligned_cols=194 Identities=14% Similarity=0.069 Sum_probs=137.1
Q ss_pred cCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhcccccccccccccCC
Q 024375 9 FDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRKSSVAEGL 88 (268)
Q Consensus 9 lDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~~~~~~~~~ 88 (268)
|||||+||.+.+..+++.++++++ ++.. .+.++.++|......+ ...+... +.
T Consensus 1 ~DGTL~Ds~~~~~~a~~~~~~~~g------~~~~--------~~~~~~~~G~~~~~~~-~~~~~~~------------~~ 53 (220)
T PLN02811 1 MDGLLLDTEKFYTEVQEKILARYG------KTFD--------WSLKAKMMGKKAIEAA-RIFVEES------------GL 53 (220)
T ss_pred CCCcceecHHHHHHHHHHHHHHcC------CCCC--------HHHHHHccCCCHHHHH-HHHHHHh------------CC
Confidence 799999999999999999999984 3210 1245566776543322 1221110 00
Q ss_pred cHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEEEcCCchHH
Q 024375 89 TVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVTSNQSRF 165 (268)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~IvTnK~~~~ 165 (268)
+. ....+++.+....+...+ .....+||||.++|+ ++|++++|+||+....
T Consensus 54 ~~------------------~~~~~~~~~~~~~~~~~~--------~~~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~ 107 (220)
T PLN02811 54 SD------------------SLSPEDFLVEREAMLQDL--------FPTSDLMPGAERLVRHLHAKGIPIAIATGSHKRH 107 (220)
T ss_pred CC------------------CCCHHHHHHHHHHHHHHH--------HhhCCCCccHHHHHHHHHHCCCcEEEEeCCchhh
Confidence 00 001111111111111111 234689999999999 7899999999999865
Q ss_pred HH-HHHHHhcCCCCCCceEecCC------CCCcHHHHHHHHhcCC---CCCCcEEEEcCcHhhHHHhhccCccCCCcEEE
Q 024375 166 VE-TLLRELAGVTITPDRLYGLG------TGPKVNVLKQLQKKPE---HQGLRLHFVEDRLATLKNVIKEPELDGWNLYL 235 (268)
Q Consensus 166 ~~-~~L~~~~gl~~~f~~i~g~~------~~pkp~~l~~~~~~l~---~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~ 235 (268)
.. .+++ +.++..+|+.+++.+ .||+|+++..++++++ ++|++|+||||+..|+++|++ +|+++|+
T Consensus 108 ~~~~~~~-~~~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~----aG~~~i~ 182 (220)
T PLN02811 108 FDLKTQR-HGELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKN----AGMSVVM 182 (220)
T ss_pred HHHHHcc-cHHHHhhCCEEEECChhhccCCCCCcHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHH----CCCeEEE
Confidence 54 4555 368888999999866 2599999999999996 999999999999999999998 8999999
Q ss_pred EecCCCCHHHHHhcCCCCCeeecChhHHh
Q 024375 236 VDWGYNTPKERAEAASMPRIQLLQLSDFC 264 (268)
Q Consensus 236 v~wGy~~~~el~~~~~~P~~~~~~~~~~~ 264 (268)
|.||+.+...+ ..|++++.++.+|.
T Consensus 183 v~~~~~~~~~~----~~~d~vi~~~~e~~ 207 (220)
T PLN02811 183 VPDPRLDKSYC----KGADQVLSSLLDFK 207 (220)
T ss_pred EeCCCCcHhhh----hchhhHhcCHhhCC
Confidence 99998765432 25889999998873
No 33
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=99.93 E-value=1.2e-25 Score=192.30 Aligned_cols=178 Identities=15% Similarity=0.094 Sum_probs=122.2
Q ss_pred cEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhH-------HHHHHHHHhcc
Q 024375 3 DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDT-------LLLVRLLLEMR 75 (268)
Q Consensus 3 ~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~-------~~~~~~l~~~~ 75 (268)
.+|+|||||||+||.+.+..+++.++++++ .... ..++++.++|.|... ..+.+.+...
T Consensus 1 ~~viFD~DGTLiDs~~~~~~a~~~~~~~~g------~~~~-------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~- 66 (197)
T TIGR01548 1 QALVLDMDGVMADVSQSYRRAIIDTVEHFG------GVSV-------THADIDHTKLAGNANNDWQLTHRLVVDGLNSA- 66 (197)
T ss_pred CceEEecCceEEechHHHHHHHHHHHHHHc------CCCC-------CHHHHHHHHHccCccCchHHHHHHHHHhhhcc-
Confidence 379999999999999999999999999994 1111 123466667755311 0011222100
Q ss_pred cccccccccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhcc--ccc---cccCCCCCccHHHHHH-
Q 024375 76 LPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTD--FTT---WIGANRLYPGVSDALK- 149 (268)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~--~~~---~~~~~~lypGv~e~L~- 149 (268)
. ..++ .+....++....|++.|.... ... -.....+.|++.++|+
T Consensus 67 -----------~-----------------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ 117 (197)
T TIGR01548 67 -----------S-----------------SERV-RDAPTLEAVTAQFQALYQGVGYYRDLATLGLIEDETLLTPKGLLRE 117 (197)
T ss_pred -----------c-----------------chhc-cCCccHHHHHHHHHHHHcCCcccccccchhhhccccccCHHHHHHH
Confidence 0 0000 001112233344444443211 000 0011245566689988
Q ss_pred --hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCC---CCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhc
Q 024375 150 --LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT---GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIK 224 (268)
Q Consensus 150 --~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~---~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~ 224 (268)
++|++++|+||+++..++.+|++ +|+..+|+.+++++. ||+|+++..+++++++++++|+||||+.+|+++|++
T Consensus 118 l~~~g~~~~i~T~~~~~~~~~~l~~-~gl~~~f~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~ 196 (197)
T TIGR01548 118 LHRAPKGMAVVTGRPRKDAAKFLTT-HGLEILFPVQIWMEDCPPKPNPEPLILAAKALGVEACHAAMVGDTVDDIITGRK 196 (197)
T ss_pred HHHcCCcEEEECCCCHHHHHHHHHH-cCchhhCCEEEeecCCCCCcCHHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHh
Confidence 68999999999999999999996 999999999998763 699999999999999999999999999999999996
No 34
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=99.93 E-value=1.9e-25 Score=195.44 Aligned_cols=104 Identities=13% Similarity=0.096 Sum_probs=94.6
Q ss_pred cCCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCc
Q 024375 136 GANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLR 208 (268)
Q Consensus 136 ~~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~ 208 (268)
....+|||+.++|+ ++|++++|+||++...++..|++ +|+..+|+.|++++ .||+|++++.+++++|++|++
T Consensus 90 ~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~-~~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~ 168 (224)
T PRK14988 90 PRAVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEH-TGLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAER 168 (224)
T ss_pred ccCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHH-CCcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHH
Confidence 34689999999999 78999999999999999999995 99999999999865 359999999999999999999
Q ss_pred EEEEcCcHhhHHHhhccCccCCCc-EEEEecCCCCHH
Q 024375 209 LHFVEDRLATLKNVIKEPELDGWN-LYLVDWGYNTPK 244 (268)
Q Consensus 209 ~~~VGDs~~Di~aa~~~~~~agi~-~i~v~wGy~~~~ 244 (268)
|+|||||..|+++|++ +|++ +++|++|.+...
T Consensus 169 ~l~igDs~~di~aA~~----aG~~~~~~v~~~~~~~~ 201 (224)
T PRK14988 169 TLFIDDSEPILDAAAQ----FGIRYCLGVTNPDSGIA 201 (224)
T ss_pred EEEEcCCHHHHHHHHH----cCCeEEEEEeCCCCCcc
Confidence 9999999999999998 8997 588999987654
No 35
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=99.93 E-value=8.3e-25 Score=187.32 Aligned_cols=187 Identities=16% Similarity=0.169 Sum_probs=125.1
Q ss_pred cEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcc-cccc------cccchhhHHHHHHHHHhcc
Q 024375 3 DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMH-TLRP------VVETGYDTLLLVRLLLEMR 75 (268)
Q Consensus 3 ~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~-~ir~------~vg~G~~~~~~~~~l~~~~ 75 (268)
++|+|||||||+||.+.+..+++.++++++ ++.. .+++...+. ..+. ..+.+
T Consensus 1 k~viFDlDGTL~d~~~~~~~a~~~~~~~~g------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 59 (203)
T TIGR02252 1 KLITFDAVGTLLALKEPVGEVYCEIARKYG------VEVS-PDELEQAFRRAFKAMSEAFPNFGFS-------------- 59 (203)
T ss_pred CeEEEecCCceeeeCCCHHHHHHHHHHHhC------CCCC-HHHHHHHHHHHHHHHHhhCCCCCCC--------------
Confidence 589999999999999999999999999884 3311 111111100 0000 00000
Q ss_pred cccccccccccCCcHHHHHhhhhhhhHHHHHhhCC-CHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hC
Q 024375 76 LPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSE-NREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LA 151 (268)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~ 151 (268)
.|.+..+++ .......++..+. +.+.+.+.+..+++.|... ....+|||+.++|+ ++
T Consensus 60 ----------~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~g~~~~l~~L~~~ 120 (203)
T TIGR02252 60 ----------SGLTPQQWW---QKLVRDTFGRAGVPDPESFEKIFEELYSYFATP------EPWQVYPDAIKLLKDLRER 120 (203)
T ss_pred ----------CCCCHHHHH---HHHHHHHHHhcCCCCchhHHHHHHHHHHHhcCC------CcceeCcCHHHHHHHHHHC
Confidence 011111111 1111112222221 2234444445555444221 22479999999999 68
Q ss_pred CCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcH-hhHHHhhccC
Q 024375 152 SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEP 226 (268)
Q Consensus 152 g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~-~Di~aa~~~~ 226 (268)
|++++|+||++.. ....|++ +|+..+|+.|++++ .||+|+++..+++++|++|++|+||||+. +|+++|++
T Consensus 121 g~~~~i~Sn~~~~-~~~~l~~-~~l~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~-- 196 (203)
T TIGR02252 121 GLILGVISNFDSR-LRGLLEA-LGLLEYFDFVVTSYEVGAEKPDPKIFQEALERAGISPEEALHIGDSLRNDYQGARA-- 196 (203)
T ss_pred CCEEEEEeCCchh-HHHHHHH-CCcHHhcceEEeecccCCCCCCHHHHHHHHHHcCCChhHEEEECCCchHHHHHHHH--
Confidence 9999999999876 4788995 99999999999865 35999999999999999999999999997 89999998
Q ss_pred ccCCCcEEE
Q 024375 227 ELDGWNLYL 235 (268)
Q Consensus 227 ~~agi~~i~ 235 (268)
+|+++|+
T Consensus 197 --aG~~~i~ 203 (203)
T TIGR02252 197 --AGWRALL 203 (203)
T ss_pred --cCCeeeC
Confidence 8888873
No 36
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=99.92 E-value=3e-24 Score=183.34 Aligned_cols=97 Identities=18% Similarity=0.177 Sum_probs=90.2
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEE
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLH 210 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~ 210 (268)
.++|||+.++|+ ++|++++|+||.+...++..|++ +|+..+|+.|++++ .||+|+++..++++++++|++|+
T Consensus 91 ~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~-~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~~~ 169 (198)
T TIGR01428 91 LPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKH-AGLDDPFDAVLSADAVRAYKPAPQVYQLALEALGVPPDEVL 169 (198)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-CCChhhhheeEehhhcCCCCCCHHHHHHHHHHhCCChhhEE
Confidence 479999999999 67999999999999999999996 99999999999875 35999999999999999999999
Q ss_pred EEcCcHhhHHHhhccCccCCCcEEEEecC
Q 024375 211 FVEDRLATLKNVIKEPELDGWNLYLVDWG 239 (268)
Q Consensus 211 ~VGDs~~Di~aa~~~~~~agi~~i~v~wG 239 (268)
||||+.+|+++|++ +|+++|+|..+
T Consensus 170 ~vgD~~~Di~~A~~----~G~~~i~v~r~ 194 (198)
T TIGR01428 170 FVASNPWDLGGAKK----FGFKTAWVNRP 194 (198)
T ss_pred EEeCCHHHHHHHHH----CCCcEEEecCC
Confidence 99999999999998 89999999764
No 37
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=99.91 E-value=1.4e-24 Score=187.16 Aligned_cols=107 Identities=15% Similarity=0.098 Sum_probs=91.4
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHH--HHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCC
Q 024375 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRF--VETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGL 207 (268)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~l~IvTnK~~~~--~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~ 207 (268)
...+|||+.++|+ ++|++++|+||++... ....+.+ +++..+|+.|++++ .||+|+++..+++++|++|+
T Consensus 92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~-~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~~~ 170 (211)
T TIGR02247 92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLP-GDIMALFDAVVESCLEGLRKPDPRIYQLMLERLGVAPE 170 (211)
T ss_pred ccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhh-hhhHhhCCEEEEeeecCCCCCCHHHHHHHHHHcCCCHH
Confidence 4679999999999 6899999999987654 4444553 78889999999865 36999999999999999999
Q ss_pred cEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHh
Q 024375 208 RLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAE 248 (268)
Q Consensus 208 ~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~ 248 (268)
+|+||||+..|+.+|++ +|+++|+|.++....+++..
T Consensus 171 ~~l~i~D~~~di~aA~~----aG~~~i~v~~~~~~~~~l~~ 207 (211)
T TIGR02247 171 ECVFLDDLGSNLKPAAA----LGITTIKVSDEEQAIHDLEK 207 (211)
T ss_pred HeEEEcCCHHHHHHHHH----cCCEEEEECCHHHHHHHHHH
Confidence 99999999999999998 89999999887666666554
No 38
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=99.91 E-value=3.3e-24 Score=176.48 Aligned_cols=95 Identities=19% Similarity=0.263 Sum_probs=88.4
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcE
Q 024375 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRL 209 (268)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~ 209 (268)
..++|||+.++|+ ++|++++|+||.+...++..+++ +|+..+|+.+++++ .||+|+++..++++++++|+++
T Consensus 75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~-~~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~~ 153 (176)
T PF13419_consen 75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLER-LGLDDYFDEIISSDDVGSRKPDPDAYRRALEKLGIPPEEI 153 (176)
T ss_dssp GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHH-TTHGGGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGGGE
T ss_pred ccchhhhhhhhhhhcccccceeEEeecCCcccccccccc-cccccccccccccchhhhhhhHHHHHHHHHHHcCCCcceE
Confidence 4589999999999 59999999999999999999996 99999999999765 3599999999999999999999
Q ss_pred EEEcCcHhhHHHhhccCccCCCcEEEE
Q 024375 210 HFVEDRLATLKNVIKEPELDGWNLYLV 236 (268)
Q Consensus 210 ~~VGDs~~Di~aa~~~~~~agi~~i~v 236 (268)
+||||+..|+++|++ +|+++|+|
T Consensus 154 ~~vgD~~~d~~~A~~----~G~~~i~v 176 (176)
T PF13419_consen 154 LFVGDSPSDVEAAKE----AGIKTIWV 176 (176)
T ss_dssp EEEESSHHHHHHHHH----TTSEEEEE
T ss_pred EEEeCCHHHHHHHHH----cCCeEEeC
Confidence 999999999999999 89999986
No 39
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=99.90 E-value=1.1e-23 Score=185.52 Aligned_cols=100 Identities=9% Similarity=-0.019 Sum_probs=85.8
Q ss_pred ccCCCCCccHHHHHH---hCCCcEEEEcCC----chHHHHHHHHHhcCCCCCCceEecCCC--CCcHHHHHHHHhcCCCC
Q 024375 135 IGANRLYPGVSDALK---LASSRIYIVTSN----QSRFVETLLRELAGVTITPDRLYGLGT--GPKVNVLKQLQKKPEHQ 205 (268)
Q Consensus 135 ~~~~~lypGv~e~L~---~~g~~l~IvTnK----~~~~~~~~L~~~~gl~~~f~~i~g~~~--~pkp~~l~~~~~~l~~~ 205 (268)
...+.++|++.++|+ ++|++++||||| ++..++.++++ +|+..+|+.|+|++. ++||+.. .+++++++
T Consensus 110 ~~~s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~-lGi~~~f~~i~~~d~~~~~Kp~~~-~~l~~~~i- 186 (237)
T TIGR01672 110 DEFSIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKN-FHIPAMNPVIFAGDKPGQYQYTKT-QWIQDKNI- 186 (237)
T ss_pred ccCCcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHH-hCCchheeEEECCCCCCCCCCCHH-HHHHhCCC-
Confidence 345689999999999 899999999998 88899999995 999999999999764 2566555 45666665
Q ss_pred CCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHH
Q 024375 206 GLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPK 244 (268)
Q Consensus 206 ~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~ 244 (268)
++||||+.+|+.+|++ ||+++|+|.|||++..
T Consensus 187 ---~i~vGDs~~DI~aAk~----AGi~~I~V~~g~~s~~ 218 (237)
T TIGR01672 187 ---RIHYGDSDNDITAAKE----AGARGIRILRASNSTY 218 (237)
T ss_pred ---eEEEeCCHHHHHHHHH----CCCCEEEEEecCCCCC
Confidence 6999999999999998 8999999999998763
No 40
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=99.89 E-value=3.7e-22 Score=163.56 Aligned_cols=85 Identities=19% Similarity=0.222 Sum_probs=77.9
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC---CCCcHHHHHHHHhcCCCCCCcEE
Q 024375 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG---TGPKVNVLKQLQKKPEHQGLRLH 210 (268)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~---~~pkp~~l~~~~~~l~~~~~~~~ 210 (268)
...++||+.++|+ ++|++++|+||++...+...++. + +..+|+.|++.+ .||+|+++..++++++++| +|+
T Consensus 62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~-~-l~~~f~~i~~~~~~~~Kp~~~~~~~~~~~~~~~~-~~l 138 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRK-H-LGDYFDLILGSDEFGAKPEPEIFLAALESLGLPP-EVL 138 (154)
T ss_pred hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHH-H-HHhcCcEEEecCCCCCCcCHHHHHHHHHHcCCCC-CEE
Confidence 3467899999999 68999999999999999999995 7 888999999865 3699999999999999999 999
Q ss_pred EEcCcHhhHHHhhc
Q 024375 211 FVEDRLATLKNVIK 224 (268)
Q Consensus 211 ~VGDs~~Di~aa~~ 224 (268)
||||+..|+++|++
T Consensus 139 ~iGDs~~Di~aa~~ 152 (154)
T TIGR01549 139 HVGDNLNDIEGARN 152 (154)
T ss_pred EEeCCHHHHHHHHH
Confidence 99999999999998
No 41
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=99.89 E-value=3e-22 Score=171.54 Aligned_cols=106 Identities=15% Similarity=0.190 Sum_probs=93.3
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEE
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHF 211 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~ 211 (268)
.+|||+.++|+ ++|++++|+||++...+...+..+.++..+|+.|++++ .||+|+++..+++++|++|++|+|
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l~ 163 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFSAADAVF 163 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCChhHeEE
Confidence 58999999999 68999999999999988877764247888999999865 359999999999999999999999
Q ss_pred EcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHh
Q 024375 212 VEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAE 248 (268)
Q Consensus 212 VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~ 248 (268)
|||+..|+++|++ +|+++|++.++..-.+.++.
T Consensus 164 vgD~~~di~aA~~----aG~~~i~~~~~~~~~~~l~~ 196 (199)
T PRK09456 164 FDDNADNIEAANA----LGITSILVTDKQTIPDYFAK 196 (199)
T ss_pred eCCCHHHHHHHHH----cCCEEEEecCCccHHHHHHh
Confidence 9999999999999 89999999998766655543
No 42
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=99.88 E-value=2.3e-22 Score=170.10 Aligned_cols=121 Identities=23% Similarity=0.230 Sum_probs=98.6
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCch---------------HHHHHHHHHhcCCCCCCceEecC-----C----CCCc
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSNQS---------------RFVETLLRELAGVTITPDRLYGL-----G----TGPK 191 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK~~---------------~~~~~~L~~~~gl~~~f~~i~g~-----~----~~pk 191 (268)
.+|||+.++|+ ++|++++|+||++. +....+|++ +|+ +|+.+++. + .||+
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~--~f~~i~~~~~~~~~~~~~~KP~ 105 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLAD-RGG--RLDGIYYCPHHPEDGCDCRKPK 105 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHH-cCC--ccceEEECCCCCCCCCcCCCCC
Confidence 68999999999 78999999999973 445667775 787 46666532 1 3599
Q ss_pred HHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 192 VNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 192 p~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
|+++..++++++++|++|+||||+.+|+++|++ +|+++|+|.||+.... +....+.|++++.++.++...|
T Consensus 106 p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~----aG~~~i~v~~g~~~~~-~~~~~~~~~~ii~~l~el~~~l 176 (181)
T PRK08942 106 PGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAA----AGVTPVLVRTGKGVTT-LAEGAAPGTWVLDSLADLPQAL 176 (181)
T ss_pred HHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHH----CCCeEEEEcCCCCchh-hhcccCCCceeecCHHHHHHHH
Confidence 999999999999999999999999999999999 8999999999987543 3322222289999999998765
No 43
>PLN02954 phosphoserine phosphatase
Probab=99.88 E-value=1.4e-21 Score=169.72 Aligned_cols=120 Identities=18% Similarity=0.329 Sum_probs=94.0
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCC--CCCce---------EecCC-------CCCcHHHHH
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVT--ITPDR---------LYGLG-------TGPKVNVLK 196 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~--~~f~~---------i~g~~-------~~pkp~~l~ 196 (268)
..+|||+.++|+ ++|++++|+||+....++.+++. +|+. .+|+. +.|.+ .++||++++
T Consensus 83 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~-~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~ 161 (224)
T PLN02954 83 PRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAI-LGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQ 161 (224)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-hCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHH
Confidence 469999999999 78999999999999999999996 9997 35532 33322 137999999
Q ss_pred HHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 197 QLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 197 ~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
.++++++. ++++||||+.+|+.+|++ +|+.++. .||++...+... ..|++++.++++|...|
T Consensus 162 ~~~~~~~~--~~~i~iGDs~~Di~aa~~----~~~~~~~-~~~~~~~~~~~~--~~~~~~i~~~~el~~~~ 223 (224)
T PLN02954 162 HIKKKHGY--KTMVMIGDGATDLEARKP----GGADLFI-GYGGVQVREAVA--AKADWFVTDFQDLIEVL 223 (224)
T ss_pred HHHHHcCC--CceEEEeCCHHHHHhhhc----CCCCEEE-ecCCCccCHHHH--hcCCEEECCHHHHHHhh
Confidence 99998875 689999999999999887 6777654 466543333333 36789999999998765
No 44
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=99.87 E-value=6e-22 Score=165.72 Aligned_cols=93 Identities=22% Similarity=0.247 Sum_probs=84.8
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEE
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLH 210 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~ 210 (268)
..++||+.++|+ ++|++++|+||.+... ..++.+ +|+..+|+.|++++ .||+|+++..++++++++|++|+
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~-~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~ 161 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQE-LGLRDLFDVVIFSGDVGRGKPDPDIYLLALKKLGLKPEECL 161 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHh-cCCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcceEE
Confidence 589999999999 6899999999999998 777775 99999999998754 35999999999999999999999
Q ss_pred EEcCcHhhHHHhhccCccCCCcEEEE
Q 024375 211 FVEDRLATLKNVIKEPELDGWNLYLV 236 (268)
Q Consensus 211 ~VGDs~~Di~aa~~~~~~agi~~i~v 236 (268)
||||+..|+++|++ +|+++|+|
T Consensus 162 ~vgD~~~di~aA~~----~G~~~i~v 183 (183)
T TIGR01509 162 FVDDSPAGIEAAKA----AGMHTVLV 183 (183)
T ss_pred EEcCCHHHHHHHHH----cCCEEEeC
Confidence 99999999999998 89999875
No 45
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=99.86 E-value=7.7e-22 Score=164.98 Aligned_cols=82 Identities=18% Similarity=0.198 Sum_probs=76.2
Q ss_pred CCCCccHHHHHHhCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEc
Q 024375 138 NRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVE 213 (268)
Q Consensus 138 ~~lypGv~e~L~~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VG 213 (268)
..+|||+.++|+ +++|+||++.......+++ +|+..+|+.|++++ .||+|+++..+++++|++|++|+|||
T Consensus 89 ~~~~~g~~~~L~----~~~i~Tn~~~~~~~~~l~~-~~l~~~fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~p~~~l~vg 163 (175)
T TIGR01493 89 LPPWPDSAAALA----RVAILSNASHWAFDQFAQQ-AGLPWYFDRAFSVDTVRAYKPDPVVYELVFDTVGLPPDRVLMVA 163 (175)
T ss_pred CCCCCchHHHHH----HHhhhhCCCHHHHHHHHHH-CCCHHHHhhhccHhhcCCCCCCHHHHHHHHHHHCCCHHHeEeEe
Confidence 579999999998 5899999999999999996 99999999988865 25999999999999999999999999
Q ss_pred CcHhhHHHhhc
Q 024375 214 DRLATLKNVIK 224 (268)
Q Consensus 214 Ds~~Di~aa~~ 224 (268)
|+.+|+++|++
T Consensus 164 D~~~Di~~A~~ 174 (175)
T TIGR01493 164 AHQWDLIGARK 174 (175)
T ss_pred cChhhHHHHhc
Confidence 99999999986
No 46
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=99.84 E-value=6.7e-21 Score=160.55 Aligned_cols=105 Identities=16% Similarity=0.137 Sum_probs=89.8
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCC-chHHHHHHHHHhcCCC---------CCCceEecCCCC----CcHHHHHHHH
Q 024375 137 ANRLYPGVSDALK---LASSRIYIVTSN-QSRFVETLLRELAGVT---------ITPDRLYGLGTG----PKVNVLKQLQ 199 (268)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~l~IvTnK-~~~~~~~~L~~~~gl~---------~~f~~i~g~~~~----pkp~~l~~~~ 199 (268)
...+||||.++|+ ++|++++|+||+ +...++.+|+. +|+. .||+.+++++.. |.|+++..+.
T Consensus 43 ~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~-~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~~~ 121 (174)
T TIGR01685 43 EVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGT-FEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQKVN 121 (174)
T ss_pred EEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHh-CCcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHHhh
Confidence 4689999999999 799999999999 99999999995 9998 999999987632 3345555555
Q ss_pred hcC--CCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHH
Q 024375 200 KKP--EHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKER 246 (268)
Q Consensus 200 ~~l--~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el 246 (268)
+.+ +++|++|+||||+..|+++|++ +|+++++|.||+.-.+.+
T Consensus 122 ~~~~~gl~p~e~l~VgDs~~di~aA~~----aGi~~i~v~~g~~~~~~~ 166 (174)
T TIGR01685 122 KVDPSVLKPAQILFFDDRTDNVREVWG----YGVTSCYCPSGMDKGTFK 166 (174)
T ss_pred hcccCCCCHHHeEEEcChhHhHHHHHH----hCCEEEEcCCCccHHHHH
Confidence 555 7999999999999999999998 899999999999665543
No 47
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=99.84 E-value=4.6e-20 Score=159.69 Aligned_cols=117 Identities=16% Similarity=0.141 Sum_probs=91.3
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceE------------ecCCC--CCcHHHHHHHHh
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRL------------YGLGT--GPKVNVLKQLQK 200 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i------------~g~~~--~pkp~~l~~~~~ 200 (268)
.+++||+.++|+ ++|++++|+||.....++.++++ +|+..+|+.. .|... +|||+++..+++
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 162 (219)
T TIGR00338 84 LPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDK-LGLDAAFANRLEVEDGKLTGLVEGPIVDASYKGKTLLILLR 162 (219)
T ss_pred CCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-cCCCceEeeEEEEECCEEEEEecCcccCCcccHHHHHHHHH
Confidence 479999999999 68999999999999999999996 9999888532 12111 269999999999
Q ss_pred cCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeec--ChhHHhhhc
Q 024375 201 KPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLL--QLSDFCTKL 267 (268)
Q Consensus 201 ~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~--~~~~~~~~~ 267 (268)
++++++++|+||||+.+|+.+|++ +|+++ .|+ ..+.+.. .+++++. ++.++..+|
T Consensus 163 ~~~~~~~~~i~iGDs~~Di~aa~~----ag~~i---~~~--~~~~~~~---~a~~~i~~~~~~~~~~~~ 219 (219)
T TIGR00338 163 KEGISPENTVAVGDGANDLSMIKA----AGLGI---AFN--AKPKLQQ---KADICINKKDLTDILPLL 219 (219)
T ss_pred HcCCCHHHEEEEECCHHHHHHHHh----CCCeE---EeC--CCHHHHH---hchhccCCCCHHHHHhhC
Confidence 999999999999999999999998 77764 333 3334443 2567766 445555443
No 48
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.84 E-value=2.6e-19 Score=155.28 Aligned_cols=122 Identities=20% Similarity=0.189 Sum_probs=104.1
Q ss_pred CCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEE
Q 024375 138 NRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHF 211 (268)
Q Consensus 138 ~~lypGv~e~L~--~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~ 211 (268)
.++||++.++|+ .+.++++|+||-........|++ +|+..+||.|+.++ .||+|+++..+++++|++|++++|
T Consensus 98 ~~~~~~~~~~L~~l~~~~~l~ilTNg~~~~~~~~l~~-~gl~~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~~~l~ 176 (229)
T COG1011 98 LPDYPEALEALKELGKKYKLGILTNGARPHQERKLRQ-LGLLDYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEALF 176 (229)
T ss_pred CccChhHHHHHHHHHhhccEEEEeCCChHHHHHHHHH-cCChhhhheEEEecccccCCCCcHHHHHHHHHcCCCcceEEE
Confidence 589999999999 22288999999999999999996 99999999999876 359999999999999999999999
Q ss_pred EcCcHhhH-HHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 212 VEDRLATL-KNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 212 VGDs~~Di-~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
|||+..+. .+|++ +|+.+|++..+.... ......|++.+.++.++...+
T Consensus 177 VgD~~~~di~gA~~----~G~~~vwi~~~~~~~---~~~~~~~~~~i~~l~~l~~~~ 226 (229)
T COG1011 177 VGDSLENDILGARA----LGMKTVWINRGGKPL---PDALEAPDYEISSLAELLDLL 226 (229)
T ss_pred ECCChhhhhHHHHh----cCcEEEEECCCCCCC---CCCccCCceEEcCHHHHHHHH
Confidence 99988666 99998 899999888775443 222257999999999997765
No 49
>PRK06769 hypothetical protein; Validated
Probab=99.84 E-value=1.1e-20 Score=159.21 Aligned_cols=125 Identities=16% Similarity=0.046 Sum_probs=100.3
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchH--------HHHHHHHHhcCCCCCCceEe-cCC----CCCcHHHHHHHHhc
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSR--------FVETLLRELAGVTITPDRLY-GLG----TGPKVNVLKQLQKK 201 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~--------~~~~~L~~~~gl~~~f~~i~-g~~----~~pkp~~l~~~~~~ 201 (268)
..+||||.++|+ ++|++++|+||++.. .+...++. +|++.+|..+. +++ .||+|+++.+++++
T Consensus 27 ~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~-~g~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~ 105 (173)
T PRK06769 27 FTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKG-FGFDDIYLCPHKHGDGCECRKPSTGMLLQAAEK 105 (173)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHh-CCcCEEEECcCCCCCCCCCCCCCHHHHHHHHHH
Confidence 478999999999 789999999999852 24445774 88876654433 322 36999999999999
Q ss_pred CCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHH----HHhcCCCCCeeecChhHHhhhc
Q 024375 202 PEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKE----RAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 202 l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~e----l~~~~~~P~~~~~~~~~~~~~~ 267 (268)
++.+|++|+||||+.+|+++|++ +|+.+|+|.||++.... .......|++++.++++|...|
T Consensus 106 l~~~p~~~i~IGD~~~Di~aA~~----aGi~~i~v~~g~~~~~~~~~~~~l~~~~~~~~~~~~~el~~~l 171 (173)
T PRK06769 106 HGLDLTQCAVIGDRWTDIVAAAK----VNATTILVRTGAGYDALHTYRDKWAHIEPNYIAENFEDAVNWI 171 (173)
T ss_pred cCCCHHHeEEEcCCHHHHHHHHH----CCCeEEEEecCCCchhhhhhhcccccCCCcchhhCHHHHHHHH
Confidence 99999999999999999999999 89999999999976310 1112357999999999997654
No 50
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=99.84 E-value=7.2e-20 Score=156.78 Aligned_cols=117 Identities=13% Similarity=0.118 Sum_probs=87.3
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEe---------cCCCCCcHHHHHHHHhcCCC
Q 024375 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLY---------GLGTGPKVNVLKQLQKKPEH 204 (268)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~---------g~~~~pkp~~l~~~~~~l~~ 204 (268)
...+|||+.++|+ ++ ++++|+||+....++.++++ +|+..+|+..+ |.+ .++|+....++++++.
T Consensus 66 ~~~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~-~gl~~~f~~~~~~~~~~~i~~~~-~~~p~~k~~~l~~~~~ 142 (205)
T PRK13582 66 TLDPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQ-LGWPTLFCHSLEVDEDGMITGYD-LRQPDGKRQAVKALKS 142 (205)
T ss_pred hCCCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHH-cCCchhhcceEEECCCCeEECcc-ccccchHHHHHHHHHH
Confidence 3679999999999 45 99999999999999999996 99988876432 222 2445555556666666
Q ss_pred CCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCe-eecChhHHhhhc
Q 024375 205 QGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRI-QLLQLSDFCTKL 267 (268)
Q Consensus 205 ~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~-~~~~~~~~~~~~ 267 (268)
.+++|+|||||.+|+.++++ +|+ +|.|++. . .... ..|++ ++.++.+|...|
T Consensus 143 ~~~~~v~iGDs~~D~~~~~a----a~~---~v~~~~~-~-~~~~--~~~~~~~~~~~~el~~~l 195 (205)
T PRK13582 143 LGYRVIAAGDSYNDTTMLGE----ADA---GILFRPP-A-NVIA--EFPQFPAVHTYDELLAAI 195 (205)
T ss_pred hCCeEEEEeCCHHHHHHHHh----CCC---CEEECCC-H-HHHH--hCCcccccCCHHHHHHHH
Confidence 67899999999999999998 564 3446653 2 2322 24565 899999997654
No 51
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=99.82 E-value=6.5e-20 Score=159.52 Aligned_cols=121 Identities=16% Similarity=0.143 Sum_probs=88.3
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCC--CC--ceEecCC----CCCcHHHH----------
Q 024375 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTI--TP--DRLYGLG----TGPKVNVL---------- 195 (268)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~--~f--~~i~g~~----~~pkp~~l---------- 195 (268)
...+|||+.++|+ ++|++++|+||+...+++.+|++ + +.. ++ +..++++ .+|+|++.
T Consensus 72 ~~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~-~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K 149 (219)
T PRK09552 72 TAEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQG-L-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCK 149 (219)
T ss_pred CCCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHH-h-CCcCcEEEeEEEecCCeeEEeccCCccccccccCCCch
Confidence 3689999999999 79999999999999999999996 7 643 21 2223322 13555542
Q ss_pred HHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhcC
Q 024375 196 KQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 268 (268)
Q Consensus 196 ~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~~ 268 (268)
..++++++..+++|+||||+.+|+.+|++ ||+.++ . + ...+.......|.+.+++..|+...|+
T Consensus 150 ~~~l~~~~~~~~~~i~iGDs~~Di~aa~~----Ag~~~a--~-~--~l~~~~~~~~~~~~~~~~f~ei~~~l~ 213 (219)
T PRK09552 150 PSLIRKLSDTNDFHIVIGDSITDLEAAKQ----ADKVFA--R-D--FLITKCEELGIPYTPFETFHDVQTELK 213 (219)
T ss_pred HHHHHHhccCCCCEEEEeCCHHHHHHHHH----CCccee--H-H--HHHHHHHHcCCCccccCCHHHHHHHHH
Confidence 36778888899999999999999999998 777333 2 2 112222234568888999999877653
No 52
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=99.82 E-value=9.9e-20 Score=153.43 Aligned_cols=117 Identities=23% Similarity=0.242 Sum_probs=97.1
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCch---------------HHHHHHHHHhcCCCCCCceEecC------------C
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQS---------------RFVETLLRELAGVTITPDRLYGL------------G 187 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~---------------~~~~~~L~~~~gl~~~f~~i~g~------------~ 187 (268)
..+||||.++|+ ++|++++|+||++. .....++++ +++. |+.++.. +
T Consensus 25 ~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~--~~~i~~~~~~~~~~~~~~~~ 101 (176)
T TIGR00213 25 FEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAE-RDVD--LDGIYYCPHHPEGVEEFRQV 101 (176)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHH-cCCC--ccEEEECCCCCcccccccCC
Confidence 368999999999 79999999999995 455677885 7776 5655421 1
Q ss_pred ---CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcE-EEEecCCCCHHHHHhcCCCCCeeecChhHH
Q 024375 188 ---TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL-YLVDWGYNTPKERAEAASMPRIQLLQLSDF 263 (268)
Q Consensus 188 ---~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~-i~v~wGy~~~~el~~~~~~P~~~~~~~~~~ 263 (268)
.||+|+++..+++++++++++|+||||+.+||++|++ +|+++ ++|.||++..... ...|++++.++++|
T Consensus 102 ~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~----aG~~~~i~v~~g~~~~~~~---~~~ad~~i~~~~el 174 (176)
T TIGR00213 102 CDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVA----AKVKTNVLVRTGKPITPEA---ENIADWVLNSLADL 174 (176)
T ss_pred CCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHH----CCCcEEEEEecCCcccccc---cccCCEEeccHHHh
Confidence 3699999999999999999999999999999999998 89998 8999998743222 24689999999988
Q ss_pred h
Q 024375 264 C 264 (268)
Q Consensus 264 ~ 264 (268)
.
T Consensus 175 ~ 175 (176)
T TIGR00213 175 P 175 (176)
T ss_pred h
Confidence 5
No 53
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=99.81 E-value=6.8e-20 Score=161.47 Aligned_cols=98 Identities=12% Similarity=0.062 Sum_probs=81.9
Q ss_pred cccCCCCCccHHHHHH---hCCCcEEEEcC----CchHHHHHHHHHhcCC--CCCCceEecCCC--CCcHHHHHHHHhcC
Q 024375 134 WIGANRLYPGVSDALK---LASSRIYIVTS----NQSRFVETLLRELAGV--TITPDRLYGLGT--GPKVNVLKQLQKKP 202 (268)
Q Consensus 134 ~~~~~~lypGv~e~L~---~~g~~l~IvTn----K~~~~~~~~L~~~~gl--~~~f~~i~g~~~--~pkp~~l~~~~~~l 202 (268)
+...+.||||+.++|+ ++|+++++||| |.+..++.+++. +|+ ..+|+.++|++. |+++.. +++++
T Consensus 109 ~~~~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~-~gip~~~~f~vil~gd~~~K~~K~~---~l~~~ 184 (237)
T PRK11009 109 WDEFSIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADD-FHIPADNMNPVIFAGDKPGQYTKTQ---WLKKK 184 (237)
T ss_pred ccccCcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHH-cCCCcccceeEEEcCCCCCCCCHHH---HHHhc
Confidence 3445789999999999 89999999999 557788999985 999 899999998774 343332 44566
Q ss_pred CCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCH
Q 024375 203 EHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTP 243 (268)
Q Consensus 203 ~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~ 243 (268)
++ ++||||+.+|+++|++ ||+++|+|.|||++.
T Consensus 185 ~i----~I~IGDs~~Di~aA~~----AGi~~I~v~~G~~~~ 217 (237)
T PRK11009 185 NI----RIFYGDSDNDITAARE----AGARGIRILRAANST 217 (237)
T ss_pred CC----eEEEcCCHHHHHHHHH----cCCcEEEEecCCCCC
Confidence 65 7999999999999998 899999999999874
No 54
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=99.80 E-value=8e-19 Score=149.23 Aligned_cols=96 Identities=10% Similarity=0.015 Sum_probs=80.4
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC-C-------------CCcHHHHHHHH
Q 024375 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-T-------------GPKVNVLKQLQ 199 (268)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~-~-------------~pkp~~l~~~~ 199 (268)
..++|||+.++|+ ++|++++|+||+....++.++++ +|+..+|+.++..+ . .+|++.+..++
T Consensus 78 ~~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~-~g~~~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~~ 156 (201)
T TIGR01491 78 EISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEK-LNPDYVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERLK 156 (201)
T ss_pred hCCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHH-hCCCeEEEEEEEEcCCCeEecceeeEEccccHHHHHHHHH
Confidence 3579999999999 68999999999999999999995 99988776554321 1 13457889999
Q ss_pred hcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEe
Q 024375 200 KKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVD 237 (268)
Q Consensus 200 ~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~ 237 (268)
+++++++++++||||+.+|+.+|++ ||++++...
T Consensus 157 ~~~~~~~~~~i~iGDs~~D~~~a~~----ag~~~a~~~ 190 (201)
T TIGR01491 157 RELNPSLTETVAVGDSKNDLPMFEV----ADISISLGD 190 (201)
T ss_pred HHhCCCHHHEEEEcCCHhHHHHHHh----cCCeEEECC
Confidence 9999999999999999999999998 788765543
No 55
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=99.80 E-value=1.3e-19 Score=148.52 Aligned_cols=96 Identities=27% Similarity=0.270 Sum_probs=80.6
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCch---------------HHHHHHHHHhcCCCCC--CceEec-CC----CCCcHH
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSNQS---------------RFVETLLRELAGVTIT--PDRLYG-LG----TGPKVN 193 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK~~---------------~~~~~~L~~~~gl~~~--f~~i~g-~~----~~pkp~ 193 (268)
++|||+.++|+ ++|++++|+||+++ ..+..+|++ +|+... |..+.+ ++ .||+|+
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~l~~~~~~~~~~~~~~~~~~~KP~~~ 105 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQ-LGVAVDGVLFCPHHPADNCSCRKPKPG 105 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHh-CCCceeEEEECCCCCCCCCCCCCCCHH
Confidence 68999999999 79999999999984 577888995 998632 222222 22 369999
Q ss_pred HHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecC
Q 024375 194 VLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWG 239 (268)
Q Consensus 194 ~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wG 239 (268)
++..+++++++++++|+||||+..|+++|++ +|+++|++.-|
T Consensus 106 ~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~----~Gi~~v~i~~~ 147 (147)
T TIGR01656 106 LILEALKRLGVDASRSLVVGDRLRDLQAARN----AGLAAVLLVDG 147 (147)
T ss_pred HHHHHHHHcCCChHHEEEEcCCHHHHHHHHH----CCCCEEEecCC
Confidence 9999999999999999999999999999998 89999998654
No 56
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=99.80 E-value=2.4e-19 Score=143.69 Aligned_cols=94 Identities=31% Similarity=0.326 Sum_probs=81.2
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCc--------hHHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcC-CCCC
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSNQ--------SRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKP-EHQG 206 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK~--------~~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l-~~~~ 206 (268)
.+|||+.++|+ ++|++++|+||++ .+.+..++++ +|+..++..+.+...||+|+++..+++++ +++|
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~-~~l~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~ 103 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEE-LGVPIDVLYACPHCRKPKPGMFLEALKRFNEIDP 103 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHH-CCCCEEEEEECCCCCCCChHHHHHHHHHcCCCCh
Confidence 68999999998 7999999999999 8899999996 99874433333322469999999999999 5999
Q ss_pred CcEEEEcC-cHhhHHHhhccCccCCCcEEEEe
Q 024375 207 LRLHFVED-RLATLKNVIKEPELDGWNLYLVD 237 (268)
Q Consensus 207 ~~~~~VGD-s~~Di~aa~~~~~~agi~~i~v~ 237 (268)
++++|||| +..|+.+|++ +|+++|+|.
T Consensus 104 ~~~v~IGD~~~~Di~~A~~----~Gi~~i~~~ 131 (132)
T TIGR01662 104 EESVYVGDQDLTDLQAAKR----AGLAFILVA 131 (132)
T ss_pred hheEEEcCCCcccHHHHHH----CCCeEEEee
Confidence 99999999 7999999998 899999984
No 57
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=99.79 E-value=1.1e-19 Score=162.18 Aligned_cols=124 Identities=10% Similarity=0.030 Sum_probs=106.0
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC-------CCCcHHHHHHHHhcCCCCCCc
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-------TGPKVNVLKQLQKKPEHQGLR 208 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~-------~~pkp~~l~~~~~~l~~~~~~ 208 (268)
-.|+++.+++. +.+++++|+||++..+....+.. +|+..+|+.|.+.. .||+|+++..++++++.+|++
T Consensus 120 ~~y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~-~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~ 198 (257)
T TIGR01458 120 FSYQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLA-LDVGPFVTALEYATDTKATVVGKPSKTFFLEALRATGCEPEE 198 (257)
T ss_pred cCHHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCC-CCchHHHHHHHHHhCCCceeecCCCHHHHHHHHHHhCCChhh
Confidence 45899999888 57889999999999988888884 89988888777532 269999999999999999999
Q ss_pred EEEEcCcH-hhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 209 LHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 209 ~~~VGDs~-~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
++||||+. +||.+|++ +|+++++|.||.....+.+.....|++++.++++|...|
T Consensus 199 ~~~vGD~~~~Di~~a~~----~G~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~el~~~l 254 (257)
T TIGR01458 199 AVMIGDDCRDDVGGAQD----CGMRGIQVRTGKYRPSDEEKINVPPDLTCDSLPHAVDLI 254 (257)
T ss_pred EEEECCCcHHHHHHHHH----cCCeEEEECCCCCChHHhcccCCCCCEEECCHHHHHHHH
Confidence 99999996 99999998 899999999998665555555678999999999997643
No 58
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=99.77 E-value=2e-17 Score=144.53 Aligned_cols=103 Identities=17% Similarity=0.161 Sum_probs=88.1
Q ss_pred ccCCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhc---CCCCCCceEecC--CCCCcHHHHHHHHhcCCCCC
Q 024375 135 IGANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELA---GVTITPDRLYGL--GTGPKVNVLKQLQKKPEHQG 206 (268)
Q Consensus 135 ~~~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~---gl~~~f~~i~g~--~~~pkp~~l~~~~~~l~~~~ 206 (268)
.....+||||.++|+ ++|++++|+||++....+.++++ . ++..+|+.++.. ..||+|+++..+++++|++|
T Consensus 91 ~~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~-~~~~~L~~~f~~~fd~~~g~KP~p~~y~~i~~~lgv~p 169 (220)
T TIGR01691 91 ELTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGH-SDAGNLTPYFSGYFDTTVGLKTEAQSYVKIAGQLGSPP 169 (220)
T ss_pred CcccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhh-ccccchhhhcceEEEeCcccCCCHHHHHHHHHHhCcCh
Confidence 345689999999999 78999999999999999998884 6 555555554421 14799999999999999999
Q ss_pred CcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCC
Q 024375 207 LRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNT 242 (268)
Q Consensus 207 ~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~ 242 (268)
++|+||||+..|+++|++ ||+++|+|.|+.+.
T Consensus 170 ~e~lfVgDs~~Di~AA~~----AG~~ti~v~r~g~~ 201 (220)
T TIGR01691 170 REILFLSDIINELDAARK----AGLHTGQLVRPGND 201 (220)
T ss_pred hHEEEEeCCHHHHHHHHH----cCCEEEEEECCCCC
Confidence 999999999999999998 89999999998643
No 59
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=99.73 E-value=6.9e-17 Score=140.71 Aligned_cols=199 Identities=14% Similarity=0.072 Sum_probs=139.7
Q ss_pred cEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhccccccccc
Q 024375 3 DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRKS 82 (268)
Q Consensus 3 ~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~~~ 82 (268)
.+++||+||||+||-..+..+++.-+.+++...+ .+......|.+..... +.+... .
T Consensus 11 ~~~lfD~dG~lvdte~~y~~~~~~~~~~ygk~~~--------------~~~~~~~mG~~~~eaa--~~~~~~-~------ 67 (222)
T KOG2914|consen 11 SACLFDMDGTLVDTEDLYTEAWQELLDRYGKPYP--------------WDVKVKSMGKRTSEAA--RLFVKK-L------ 67 (222)
T ss_pred eeEEEecCCcEEecHHHHHHHHHHHHHHcCCCCh--------------HHHHHHHcCCCHHHHH--HHHHhh-c------
Confidence 4799999999999999999999998888852211 1233345666555443 333210 0
Q ss_pred ccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEEEc
Q 024375 83 SVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVT 159 (268)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~IvT 159 (268)
+. -++.+++.......... ......+.||+..++. ..|++++++|
T Consensus 68 ----~d--------------------p~s~ee~~~e~~~~~~~--------~~~~~~~~PGa~kLv~~L~~~gip~alat 115 (222)
T KOG2914|consen 68 ----PD--------------------PVSREEFNKEEEEILDR--------LFMNSILMPGAEKLVNHLKNNGIPVALAT 115 (222)
T ss_pred ----CC--------------------CCCHHHHHHHHHHHHHH--------hccccccCCcHHHHHHHHHhCCCCeeEEe
Confidence 00 11223322222222222 2345789999999999 7999999999
Q ss_pred CCchHHHHHHHHHhcC-CCCCCceEec-CC-----CCCcHHHHHHHHhcCCCCC-CcEEEEcCcHhhHHHhhccCccCCC
Q 024375 160 SNQSRFVETLLRELAG-VTITPDRLYG-LG-----TGPKVNVLKQLQKKPEHQG-LRLHFVEDRLATLKNVIKEPELDGW 231 (268)
Q Consensus 160 nK~~~~~~~~L~~~~g-l~~~f~~i~g-~~-----~~pkp~~l~~~~~~l~~~~-~~~~~VGDs~~Di~aa~~~~~~agi 231 (268)
|.++...+.-+.+ ++ +-..|..++. .+ .||+|+++..+++.+|..| +.|+.++|++..+++|++ ||+
T Consensus 116 ~s~~~~~~~k~~~-~~~~~~~f~~~v~~d~~~v~~gKP~Pdi~l~A~~~l~~~~~~k~lVfeds~~Gv~aa~a----agm 190 (222)
T KOG2914|consen 116 SSTSASFELKISR-HEDIFKNFSHVVLGDDPEVKNGKPDPDIYLKAAKRLGVPPPSKCLVFEDSPVGVQAAKA----AGM 190 (222)
T ss_pred cCCcccHHHHHHH-hhHHHHhcCCCeecCCccccCCCCCchHHHHHHHhcCCCCccceEEECCCHHHHHHHHh----cCC
Confidence 9999999999886 55 7676766554 32 2499999999999999998 999999999999999998 899
Q ss_pred cEEEEecCCCCHHHHHhcCCCCCeeecChhHHhh
Q 024375 232 NLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCT 265 (268)
Q Consensus 232 ~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~ 265 (268)
++|+|.- +.-... ....+++.+++++++..
T Consensus 191 ~vi~v~~-~~~~~~---~~~~~~~~~~~~~~~~~ 220 (222)
T KOG2914|consen 191 QVVGVAT-PDLSNL---FSAGATLILESLEDFKP 220 (222)
T ss_pred eEEEecC-CCcchh---hhhccceecccccccCc
Confidence 9999987 221111 23346688888877643
No 60
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=99.72 E-value=1.4e-16 Score=133.87 Aligned_cols=83 Identities=13% Similarity=0.221 Sum_probs=73.5
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC-----------------------CC-C
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-----------------------TG-P 190 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~-----------------------~~-p 190 (268)
.+++||+.++|+ ++|++++|+||+....++.++++ +|+..+|+.|+|.+ .+ +
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~-~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~ 149 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEG-IGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGCC 149 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-cCChhheeEEeccCceECCCCcEEEecCCCCccCcCCCCCC
Confidence 589999999999 78999999999999999999995 99999999999742 12 6
Q ss_pred cHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhc
Q 024375 191 KVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIK 224 (268)
Q Consensus 191 kp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~ 224 (268)
|++++.+++++. +++++||||+.+|+.+|++
T Consensus 150 K~~~~~~~~~~~---~~~~i~iGD~~~D~~aa~~ 180 (188)
T TIGR01489 150 KGKVIHKLSEPK---YQHIIYIGDGVTDVCPAKL 180 (188)
T ss_pred HHHHHHHHHhhc---CceEEEECCCcchhchHhc
Confidence 888998887764 7899999999999999998
No 61
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=99.72 E-value=1.8e-17 Score=138.20 Aligned_cols=100 Identities=22% Similarity=0.164 Sum_probs=86.9
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCC---------------chHHHHHHHHHhcCCCCCCc-eEec----CC----CC
Q 024375 137 ANRLYPGVSDALK---LASSRIYIVTSN---------------QSRFVETLLRELAGVTITPD-RLYG----LG----TG 189 (268)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~l~IvTnK---------------~~~~~~~~L~~~~gl~~~f~-~i~g----~~----~~ 189 (268)
...+||||.++|+ ++|++++|+||+ +...+.++|++ +|+. |+ .++| ++ .|
T Consensus 27 ~~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~-~gl~--fd~ii~~~~~~~~~~~~~K 103 (161)
T TIGR01261 27 KLRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRS-QGII--FDDVLICPHFPDDNCDCRK 103 (161)
T ss_pred HeeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHH-CCCc--eeEEEECCCCCCCCCCCCC
Confidence 3589999999999 789999999998 46788999996 9997 65 4455 23 25
Q ss_pred CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCH
Q 024375 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTP 243 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~ 243 (268)
|+|+++..+++++++++++|+||||+.+|+++|++ +|++++++++|--+-
T Consensus 104 P~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~----aGi~~i~~~~~~~~~ 153 (161)
T TIGR01261 104 PKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAEN----LGIRGIQYDEEELNW 153 (161)
T ss_pred CCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHH----CCCeEEEEChhhcCH
Confidence 99999999999999999999999999999999998 899999999886543
No 62
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=99.69 E-value=3.3e-16 Score=145.39 Aligned_cols=95 Identities=16% Similarity=0.162 Sum_probs=81.7
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCC---------------chHHHHHHHHHhcCCCCCCceE-ecC----C----CCC
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSN---------------QSRFVETLLRELAGVTITPDRL-YGL----G----TGP 190 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK---------------~~~~~~~~L~~~~gl~~~f~~i-~g~----~----~~p 190 (268)
..+||||.++|+ ++|++++|+||| +...+..+++. +|+. |+.+ ++. + .||
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~-~gl~--fd~i~i~~~~~sd~~~~rKP 105 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFES-QGIK--FDEVLICPHFPEDNCSCRKP 105 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHH-cCCc--eeeEEEeCCcCcccCCCCCC
Confidence 579999999999 789999999997 46678889996 8984 6654 442 2 359
Q ss_pred cHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecC
Q 024375 191 KVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWG 239 (268)
Q Consensus 191 kp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wG 239 (268)
+|+++..++++++++|++++||||+.+|+++|++ +|+++|+|.-.
T Consensus 106 ~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~----aGi~~I~v~~~ 150 (354)
T PRK05446 106 KTGLVEEYLAEGAIDLANSYVIGDRETDVQLAEN----MGIKGIRYARE 150 (354)
T ss_pred CHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHH----CCCeEEEEECC
Confidence 9999999999999999999999999999999998 89999999543
No 63
>PRK11590 hypothetical protein; Provisional
Probab=99.68 E-value=1.5e-15 Score=131.54 Aligned_cols=171 Identities=13% Similarity=0.072 Sum_probs=111.7
Q ss_pred cEEEEecCcccccChhHHHHHHHHHH-HHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhcccccccc
Q 024375 3 DLYALDFDGVICDSCEETALSAVKAA-RVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (268)
Q Consensus 3 ~~vlFDlDGTLvDS~~~i~~s~~~a~-~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~~ 81 (268)
++++|||||||+ .+++..+++..+ +++ |++.. ..+.+++++|.|.......+.+
T Consensus 7 k~~iFD~DGTL~--~~d~~~~~~~~~~~~~------g~~~~-------~~~~~~~~ig~~l~~~~~~~~~---------- 61 (211)
T PRK11590 7 RVVFFDLDGTLH--QQDMFGSFLRYLLRRQ------PLNLL-------LVLPLLPVIGLGLLVKGRAARW---------- 61 (211)
T ss_pred eEEEEecCCCCc--ccchHHHHHHHHHHhc------chhhH-------HHhHHHHHhccCcccchhhhhh----------
Confidence 699999999999 667888898877 666 33321 1246778888776442210000
Q ss_pred cccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHH-H---hCCCcEEE
Q 024375 82 SSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDAL-K---LASSRIYI 157 (268)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L-~---~~g~~l~I 157 (268)
+ ...+ . +....|++++++++..+.|++.|.+. ..+|||+.++| + ++|++++|
T Consensus 62 -----~--~~~~-------~--~~~~~g~~~~~~~~~~~~f~~~~~~~--------~~~~pga~e~L~~~l~~~G~~l~I 117 (211)
T PRK11590 62 -----P--MSLL-------L--WGCTFGHSEARLQALEADFVRWFRDN--------VTAFPVVQERLTTYLLSSDADVWL 117 (211)
T ss_pred -----h--HHHH-------H--HHHHcCCCHHHHHHHHHHHHHHHHHh--------CcCCccHHHHHHHHHHhCCCEEEE
Confidence 0 0000 0 00012567777777777777776432 57799999999 4 47999999
Q ss_pred EcCCchHHHHHHHHHhcCCCCCCceEecCC-----C----C---CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhc
Q 024375 158 VTSNQSRFVETLLRELAGVTITPDRLYGLG-----T----G---PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIK 224 (268)
Q Consensus 158 vTnK~~~~~~~~L~~~~gl~~~f~~i~g~~-----~----~---pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~ 224 (268)
||||++..++.+++. +|+.. .+.++|.+ . + ...+-+..+.+.++.+...+.+-|||.+|+..-.-
T Consensus 118 vSas~~~~~~~il~~-l~~~~-~~~~i~t~l~~~~tg~~~g~~c~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~ 194 (211)
T PRK11590 118 ITGSPQPLVEQVYFD-TPWLP-RVNLIASQMQRRYGGWVLTLRCLGHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYF 194 (211)
T ss_pred EeCCcHHHHHHHHHH-ccccc-cCceEEEEEEEEEccEECCccCCChHHHHHHHHHhCCCcceEEEecCCcccHHHHHh
Confidence 999999999999995 88632 34455543 1 1 11233333333335566678899999999998876
No 64
>PRK10444 UMP phosphatase; Provisional
Probab=99.68 E-value=2.4e-16 Score=140.16 Aligned_cols=72 Identities=17% Similarity=0.150 Sum_probs=67.4
Q ss_pred CCcHHHHHHHHhcCCCCCCcEEEEcCcH-hhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHh
Q 024375 189 GPKVNVLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFC 264 (268)
Q Consensus 189 ~pkp~~l~~~~~~l~~~~~~~~~VGDs~-~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~ 264 (268)
||+|+++..+++++++++++|+||||+. +||.+|++ +|+++++|.||+++.++++.....|++++.++++|-
T Consensus 174 KP~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~----~G~~~vlV~~G~~~~~~l~~~~~~pd~~~~sl~el~ 246 (248)
T PRK10444 174 KPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQ----AGLETILVLSGVSTLDDIDSMPFRPSWIYPSVADID 246 (248)
T ss_pred CCCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHH----cCCCEEEECCCCCCHHHHhcCCCCCCEEECCHHHhh
Confidence 6999999999999999999999999996 89999998 899999999999999888876788999999999984
No 65
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=99.67 E-value=2e-16 Score=132.80 Aligned_cols=100 Identities=18% Similarity=0.258 Sum_probs=87.2
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCc-hHHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEEEc
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQ-SRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVE 213 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~-~~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~VG 213 (268)
..+|||+.++|+ ++|++++|+||++ ...+..+++. +|+..++ ...||+|+++..+++++++++++++|||
T Consensus 42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~-~gl~~~~-----~~~KP~p~~~~~~l~~~~~~~~~~l~IG 115 (170)
T TIGR01668 42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKA-LGIPVLP-----HAVKPPGCAFRRAHPEMGLTSEQVAVVG 115 (170)
T ss_pred CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHH-cCCEEEc-----CCCCCChHHHHHHHHHcCCCHHHEEEEC
Confidence 479999999999 7899999999999 6888888885 8875432 2347999999999999999999999999
Q ss_pred CcH-hhHHHhhccCccCCCcEEEEecCCCCHHHHH
Q 024375 214 DRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERA 247 (268)
Q Consensus 214 Ds~-~Di~aa~~~~~~agi~~i~v~wGy~~~~el~ 247 (268)
|+. .|+++|++ +|+++|+|.||+++.+.+.
T Consensus 116 Ds~~~Di~aA~~----aGi~~i~v~~g~~~~~~~~ 146 (170)
T TIGR01668 116 DRLFTDVMGGNR----NGSYTILVEPLVHPDQWFI 146 (170)
T ss_pred CcchHHHHHHHH----cCCeEEEEccCcCCccccc
Confidence 998 69999998 8999999999998876443
No 66
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=99.66 E-value=1.8e-16 Score=143.74 Aligned_cols=98 Identities=20% Similarity=0.096 Sum_probs=90.0
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCC-CCceEecCC----------C-CCcHHHHHHHHhcC
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTI-TPDRLYGLG----------T-GPKVNVLKQLQKKP 202 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~-~f~~i~g~~----------~-~pkp~~l~~~~~~l 202 (268)
..+|||+.++|+ ++|++++|+|||+...++.+++. +|+.. ||+.++|.+ . +|+|++++++++++
T Consensus 186 ~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~-l~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~~ 264 (300)
T PHA02530 186 DKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEW-LRQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWEK 264 (300)
T ss_pred CCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHH-HHHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHHH
Confidence 479999999999 78999999999999999999995 99986 999999975 2 49999999999998
Q ss_pred CC-CCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCC
Q 024375 203 EH-QGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGY 240 (268)
Q Consensus 203 ~~-~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy 240 (268)
+. .+++|+||||+.+|+++|++ +||++++|.||-
T Consensus 265 ~~~~~~~~~~vgD~~~d~~~a~~----~Gi~~i~v~~g~ 299 (300)
T PHA02530 265 IAPKYDVLLAVDDRDQVVDMWRR----IGLECWQVAPGD 299 (300)
T ss_pred hccCceEEEEEcCcHHHHHHHHH----hCCeEEEecCCC
Confidence 88 57999999999999999999 899999999993
No 67
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=99.66 E-value=4.2e-17 Score=147.07 Aligned_cols=120 Identities=18% Similarity=0.165 Sum_probs=97.8
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHH-HHHHHhcCCCCCCceEe---cCC----CCCcHHHHHHHHhcCCCCC
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVE-TLLRELAGVTITPDRLY---GLG----TGPKVNVLKQLQKKPEHQG 206 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~-~~L~~~~gl~~~f~~i~---g~~----~~pkp~~l~~~~~~l~~~~ 206 (268)
.--|||+.++|+ ++|+ ++|+|||+..... ..+.. .|+..+|+.+. |.+ .||+|+++..++++++++|
T Consensus 142 ~~~y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~~~~~~~~-~~~g~~~~~i~~~~g~~~~~~gKP~p~~~~~~~~~~~~~~ 219 (279)
T TIGR01452 142 HFSYAKLREACAHLREPGC-LFVATNRDPWHPLSDGSRT-PGTGSLVAAIETASGRQPLVVGKPSPYMFECITENFSIDP 219 (279)
T ss_pred CCCHHHHHHHHHHHhcCCC-EEEEeCCCCCCCCcCCCcc-cChHHHHHHHHHHhCCceeccCCCCHHHHHHHHHHhCCCh
Confidence 346999999998 4676 8999999986542 23442 56666776664 333 2599999999999999999
Q ss_pred CcEEEEcCcH-hhHHHhhccCccCCCcEEEEecCCCCHHHHHhc------CCCCCeeecChhHH
Q 024375 207 LRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEA------ASMPRIQLLQLSDF 263 (268)
Q Consensus 207 ~~~~~VGDs~-~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~------~~~P~~~~~~~~~~ 263 (268)
++|+||||+. +||++|++ +|+++|+|.||+++.+++..+ ...|++++.++.+|
T Consensus 220 ~~~lmIGD~~~tDI~~A~~----aGi~si~V~~G~~~~~~l~~~~~~~~~~~~Pd~~~~~l~~l 279 (279)
T TIGR01452 220 ARTLMVGDRLETDILFGHR----CGMTTVLVLSGVSRLEEAQEYLAAGQHDLVPDYVVESLADL 279 (279)
T ss_pred hhEEEECCChHHHHHHHHH----cCCcEEEECCCCCCHHHHHhhhcccccCCCCCEEecccccC
Confidence 9999999994 99999998 899999999999999888753 35799999999875
No 68
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.66 E-value=1.4e-15 Score=139.93 Aligned_cols=91 Identities=15% Similarity=0.178 Sum_probs=76.5
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCc----e--------EecC--CCCCcHHHHHHHHh
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPD----R--------LYGL--GTGPKVNVLKQLQK 200 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~----~--------i~g~--~~~pkp~~l~~~~~ 200 (268)
.+++||+.++|+ ++|++++|+|+....+++.++++ +|++..+. . +.|. ..++||+.+.++++
T Consensus 180 l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~-Lgld~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~la~ 258 (322)
T PRK11133 180 LPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDK-LRLDAAVANELEIMDGKLTGNVLGDIVDAQYKADTLTRLAQ 258 (322)
T ss_pred CCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHH-cCCCeEEEeEEEEECCEEEeEecCccCCcccHHHHHHHHHH
Confidence 579999999998 79999999999999999999996 99875332 1 1111 12499999999999
Q ss_pred cCCCCCCcEEEEcCcHhhHHHhhccCccCCCcE
Q 024375 201 KPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (268)
Q Consensus 201 ~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~ 233 (268)
++|+++++|++|||+.+|+.++++ ||+.+
T Consensus 259 ~lgi~~~qtIaVGDg~NDl~m~~~----AGlgi 287 (322)
T PRK11133 259 EYEIPLAQTVAIGDGANDLPMIKA----AGLGI 287 (322)
T ss_pred HcCCChhhEEEEECCHHHHHHHHH----CCCeE
Confidence 999999999999999999999998 67533
No 69
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.64 E-value=1.3e-14 Score=125.43 Aligned_cols=114 Identities=12% Similarity=0.094 Sum_probs=77.1
Q ss_pred CCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCc--eEe-------cCC--CCC-cHHHHHHHHhcCC
Q 024375 138 NRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTITPD--RLY-------GLG--TGP-KVNVLKQLQKKPE 203 (268)
Q Consensus 138 ~~lypGv~e~L~--~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~--~i~-------g~~--~~p-kp~~l~~~~~~l~ 203 (268)
.++|||+.++|+ +++.+++||||+...+++.++++ +|++.+|. ..+ |.. .++ |...+.. +++.+
T Consensus 67 i~l~pga~ell~~lk~~~~~~IVS~~~~~~~~~il~~-lgi~~~~an~l~~~~~g~~tG~~~~~~~~K~~~l~~-l~~~~ 144 (203)
T TIGR02137 67 LKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQ-LGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIA-FKSLY 144 (203)
T ss_pred CCCCccHHHHHHHHHhCCeEEEEeCChHHHHHHHHHH-cCCchhhceeeEEecCCeeECeeecCcchHHHHHHH-HHhhC
Confidence 579999999999 44469999999999999999996 99998875 222 211 123 4444444 45555
Q ss_pred CCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhh
Q 024375 204 HQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTK 266 (268)
Q Consensus 204 ~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~ 266 (268)
. +++||||+.+|+.+++. ||++++ |.. .+...+.++-.| +..+.++|.+.
T Consensus 145 ~---~~v~vGDs~nDl~ml~~----Ag~~ia---~~a-k~~~~~~~~~~~--~~~~~~~~~~~ 194 (203)
T TIGR02137 145 Y---RVIAAGDSYNDTTMLSE----AHAGIL---FHA-PENVIREFPQFP--AVHTYEDLKRE 194 (203)
T ss_pred C---CEEEEeCCHHHHHHHHh----CCCCEE---ecC-CHHHHHhCCCCC--cccCHHHHHHH
Confidence 3 79999999999999998 665543 332 333333333232 34555666443
No 70
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=99.64 E-value=2.5e-15 Score=130.29 Aligned_cols=121 Identities=12% Similarity=0.113 Sum_probs=85.0
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCC---ceEecCC----CCCcHHHH----------HH
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITP---DRLYGLG----TGPKVNVL----------KQ 197 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f---~~i~g~~----~~pkp~~l----------~~ 197 (268)
..++||+.++|+ ++|++++|+|++....++.+|+. ++...++ +.+++.+ .+|+|+.. ..
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~-~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~~ 147 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEG-IVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKPS 147 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHh-hCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHHH
Confidence 589999999999 78999999999999999999995 7543333 2333333 12665543 25
Q ss_pred HHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhcC
Q 024375 198 LQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 268 (268)
Q Consensus 198 ~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~~ 268 (268)
++++++..+++++||||+.+|+.+|++ ||+ +.+ -++ ..+..+-...|.+.+++..|+...|+
T Consensus 148 ~l~~~~~~~~~~i~iGDg~~D~~~a~~----Ad~--~~a-r~~--l~~~~~~~~~~~~~~~~f~di~~~l~ 209 (214)
T TIGR03333 148 LIRKLSEPNDYHIVIGDSVTDVEAAKQ----SDL--CFA-RDY--LLNECEELGLNHAPFQDFYDVRKELE 209 (214)
T ss_pred HHHHHhhcCCcEEEEeCCHHHHHHHHh----CCe--eEe-hHH--HHHHHHHcCCCccCcCCHHHHHHHHH
Confidence 566666678899999999999999998 665 222 222 11212223347777888888877663
No 71
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=99.61 E-value=6.8e-16 Score=137.17 Aligned_cols=120 Identities=16% Similarity=0.197 Sum_probs=90.3
Q ss_pred CCCCccHHHHHH--hCCCcEEEEcCCchHHHHH--HH-HHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCc
Q 024375 138 NRLYPGVSDALK--LASSRIYIVTSNQSRFVET--LL-RELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLR 208 (268)
Q Consensus 138 ~~lypGv~e~L~--~~g~~l~IvTnK~~~~~~~--~L-~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~ 208 (268)
...|+.+...+. ++|.+ .|+||....+-.. ++ .. -.+...++...|.+ .||+|++++.+++.+++++++
T Consensus 120 ~~~y~~l~~a~~~l~~g~~-~i~tN~D~~~~~~~~~~~~~-G~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~~~~~~~~ 197 (249)
T TIGR01457 120 QIDYEKFATATLAIRKGAH-FIGTNGDLAIPTERGLLPGN-GSLITVLEVATGVKPVYIGKPNAIIMEKAVEHLGTEREE 197 (249)
T ss_pred CCCHHHHHHHHHHHHCCCe-EEEECCCCCCCCCCCCCCCc-HHHHHHHHHHhCCCccccCCChHHHHHHHHHHcCCCccc
Confidence 456777777776 67776 8899976643311 00 10 11111233344443 269999999999999999999
Q ss_pred EEEEcCcH-hhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHH
Q 024375 209 LHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDF 263 (268)
Q Consensus 209 ~~~VGDs~-~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~ 263 (268)
++||||+. +||.+|++ +|+++++|.||++..+++......|++++.++++|
T Consensus 198 ~~~VGD~~~~Di~~a~~----~G~~~v~v~~G~~~~~~~~~~~~~pd~~v~~l~~~ 249 (249)
T TIGR01457 198 TLMVGDNYLTDIRAGID----AGIDTLLVHTGVTKAEEVAGLPIAPTHVVSSLAEW 249 (249)
T ss_pred EEEECCCchhhHHHHHH----cCCcEEEEcCCCCCHHHHhcCCCCCCEEeCChhhC
Confidence 99999996 89999998 89999999999999888877667899999999875
No 72
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=99.61 E-value=2.4e-14 Score=122.19 Aligned_cols=112 Identities=17% Similarity=0.165 Sum_probs=89.6
Q ss_pred CCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCce-Ee
Q 024375 109 SENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDR-LY 184 (268)
Q Consensus 109 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~-i~ 184 (268)
|++.+++......+.+.+. ...+|||+.++|+ ++|++++|+|+++...++.++++ +|++.+|.. +.
T Consensus 66 g~~~~~l~~~~~~~~~~~~---------~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~-lg~~~~~~~~l~ 135 (202)
T TIGR01490 66 GLLEEDVRAIVEEFVNQKI---------ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARI-LGIDNAIGTRLE 135 (202)
T ss_pred CCCHHHHHHHHHHHHHHHH---------HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHH-cCCcceEecceE
Confidence 7888888777665554432 2468999999998 78999999999999999999995 999877654 22
Q ss_pred c-CC-------C------CCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEE
Q 024375 185 G-LG-------T------GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 234 (268)
Q Consensus 185 g-~~-------~------~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i 234 (268)
. .+ . .+|++.+.+++++.+++++++++||||.+|+.+++. +|.+++
T Consensus 136 ~~~~g~~~g~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~----a~~~~~ 195 (202)
T TIGR01490 136 ESEDGIYTGNIDGNNCKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSL----VGHPYV 195 (202)
T ss_pred EcCCCEEeCCccCCCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHh----CCCcEE
Confidence 1 11 0 157788999999999999999999999999999998 676653
No 73
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=99.59 E-value=2.5e-15 Score=125.85 Aligned_cols=90 Identities=23% Similarity=0.267 Sum_probs=76.3
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchH------------HHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHH
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSNQSR------------FVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQ 199 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK~~~------------~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~ 199 (268)
.+||||.++|+ ++|++++|+|||+.. .++.+|++ +|+.. +.+++.+ .||+|+++..++
T Consensus 42 ~~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~-~gl~~--~~ii~~~~~~~~KP~p~~~~~~~ 118 (166)
T TIGR01664 42 FLYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEK-LKVPI--QVLAATHAGLYRKPMTGMWEYLQ 118 (166)
T ss_pred EecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHH-cCCCE--EEEEecCCCCCCCCccHHHHHHH
Confidence 48999999999 799999999999874 57889995 99854 4455433 359999999999
Q ss_pred hcCC--CCCCcEEEEcCcH--------hhHHHhhccCccCCCcEEE
Q 024375 200 KKPE--HQGLRLHFVEDRL--------ATLKNVIKEPELDGWNLYL 235 (268)
Q Consensus 200 ~~l~--~~~~~~~~VGDs~--------~Di~aa~~~~~~agi~~i~ 235 (268)
++++ +++++++||||+. +|+++|++ +|++++.
T Consensus 119 ~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~----aGi~~~~ 160 (166)
T TIGR01664 119 SQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKN----LGLEFKY 160 (166)
T ss_pred HHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHH----CCCCcCC
Confidence 9999 9999999999996 69999999 7888753
No 74
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.56 E-value=1.9e-14 Score=122.95 Aligned_cols=84 Identities=17% Similarity=0.273 Sum_probs=74.5
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCC--CCcHHHHHHHHhcCCCCCCcEEE
Q 024375 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT--GPKVNVLKQLQKKPEHQGLRLHF 211 (268)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~--~pkp~~l~~~~~~l~~~~~~~~~ 211 (268)
...++||+.++|+ ++|++++|+|+-....+..+.+. +||. +.++-++. +|.|.++.+++++++.++++|+|
T Consensus 125 ~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~-lgi~---~~~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~ 200 (215)
T PF00702_consen 125 RDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQ-LGIF---DSIVFARVIGKPEPKIFLRIIKELQVKPGEVAM 200 (215)
T ss_dssp EEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHH-TTSC---SEEEEESHETTTHHHHHHHHHHHHTCTGGGEEE
T ss_pred cCcchhhhhhhhhhhhccCcceeeeeccccccccccccc-cccc---cccccccccccccchhHHHHHHHHhcCCCEEEE
Confidence 3579999999999 78999999999999999999996 9983 44444444 78999999999999999999999
Q ss_pred EcCcHhhHHHhhc
Q 024375 212 VEDRLATLKNVIK 224 (268)
Q Consensus 212 VGDs~~Di~aa~~ 224 (268)
|||+.+|+.|+++
T Consensus 201 vGDg~nD~~al~~ 213 (215)
T PF00702_consen 201 VGDGVNDAPALKA 213 (215)
T ss_dssp EESSGGHHHHHHH
T ss_pred EccCHHHHHHHHh
Confidence 9999999999998
No 75
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=99.56 E-value=5.5e-15 Score=118.54 Aligned_cols=85 Identities=19% Similarity=0.070 Sum_probs=79.0
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCC-chHHHHHHHHHhcC-------CCCCCceEecCCCCCcHHHHHHHHhcCC--CC
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSN-QSRFVETLLRELAG-------VTITPDRLYGLGTGPKVNVLKQLQKKPE--HQ 205 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK-~~~~~~~~L~~~~g-------l~~~f~~i~g~~~~pkp~~l~~~~~~l~--~~ 205 (268)
++|||+.++|+ ++|++++|+||+ +...+..+++. ++ +..+|+.+++++.+|||+++..+++++| +.
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~-~~~~~~i~~l~~~f~~~~~~~~~pkp~~~~~a~~~lg~~~~ 107 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKI-FEDFGIIFPLAEYFDPLTIGYWLPKSPRLVEIALKLNGVLK 107 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHh-ccccccchhhHhhhhhhhhcCCCcHHHHHHHHHHHhcCCCC
Confidence 68999999999 789999999999 89999999995 88 8899999998877899999999999999 99
Q ss_pred CCcEEEEcCcHhhHHHhhc
Q 024375 206 GLRLHFVEDRLATLKNVIK 224 (268)
Q Consensus 206 ~~~~~~VGDs~~Di~aa~~ 224 (268)
|++|+||||+..|+++.++
T Consensus 108 p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 108 PKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred cceEEEECCCHhHHHHHHh
Confidence 9999999999999987664
No 76
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=99.54 E-value=2.3e-14 Score=119.44 Aligned_cols=86 Identities=20% Similarity=0.186 Sum_probs=72.5
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecC--------------CC--CCcHHHHHHH
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGL--------------GT--GPKVNVLKQL 198 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~--------------~~--~pkp~~l~~~ 198 (268)
..++||+.++|+ ++|++++|+|+....+++.++++ +|+..+|...+.. .. ..|++.+.++
T Consensus 72 ~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~-~g~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~~~ 150 (177)
T TIGR01488 72 VALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEK-LGIDDVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLKEL 150 (177)
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-cCCchheeeeEEECCCCEEeCccCCcccCCcchHHHHHHHH
Confidence 468999999999 79999999999999999999995 9998766433221 11 1678899999
Q ss_pred HhcCCCCCCcEEEEcCcHhhHHHhhc
Q 024375 199 QKKPEHQGLRLHFVEDRLATLKNVIK 224 (268)
Q Consensus 199 ~~~l~~~~~~~~~VGDs~~Di~aa~~ 224 (268)
++++++++++++||||+.+|+.+++.
T Consensus 151 ~~~~~~~~~~~~~iGDs~~D~~~~~~ 176 (177)
T TIGR01488 151 LEESKITLKKIIAVGDSVNDLPMLKL 176 (177)
T ss_pred HHHhCCCHHHEEEEeCCHHHHHHHhc
Confidence 99999999999999999999999875
No 77
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.53 E-value=6.3e-14 Score=122.89 Aligned_cols=95 Identities=17% Similarity=0.209 Sum_probs=83.1
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEE
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLH 210 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~ 210 (268)
....+|+.++|+ ++|..|+|+||-..+.= .+|.. +|+..|||.++.+. .||+|.++..+++.+++.|++|+
T Consensus 112 ~~~~~~~~~~lq~lR~~g~~l~iisN~d~r~~-~~l~~-~~l~~~fD~vv~S~e~g~~KPDp~If~~al~~l~v~Pee~v 189 (237)
T KOG3085|consen 112 WKYLDGMQELLQKLRKKGTILGIISNFDDRLR-LLLLP-LGLSAYFDFVVESCEVGLEKPDPRIFQLALERLGVKPEECV 189 (237)
T ss_pred ceeccHHHHHHHHHHhCCeEEEEecCCcHHHH-HHhhc-cCHHHhhhhhhhhhhhccCCCChHHHHHHHHHhCCChHHeE
Confidence 356788999998 79999999999987765 77885 99999999999654 46999999999999999999999
Q ss_pred EEcCcH-hhHHHhhccCccCCCcEEEEec
Q 024375 211 FVEDRL-ATLKNVIKEPELDGWNLYLVDW 238 (268)
Q Consensus 211 ~VGDs~-~Di~aa~~~~~~agi~~i~v~w 238 (268)
+|||+. +|+++|++ +|+.++.|.-
T Consensus 190 hIgD~l~nD~~gA~~----~G~~ailv~~ 214 (237)
T KOG3085|consen 190 HIGDLLENDYEGARN----LGWHAILVDN 214 (237)
T ss_pred EecCccccccHhHHH----cCCEEEEEcc
Confidence 999997 56999999 7888898873
No 78
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=99.53 E-value=1.5e-14 Score=105.27 Aligned_cols=71 Identities=21% Similarity=0.230 Sum_probs=67.3
Q ss_pred CCcHHHHHHHHhcCCCCCCcEEEEcCc-HhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHH
Q 024375 189 GPKVNVLKQLQKKPEHQGLRLHFVEDR-LATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDF 263 (268)
Q Consensus 189 ~pkp~~l~~~~~~l~~~~~~~~~VGDs-~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~ 263 (268)
||+|.++..+++++++++++++||||+ ..||++|++ +|+++|+|.+|+.+.+++......|++++.++.|+
T Consensus 4 KP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~----~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~e~ 75 (75)
T PF13242_consen 4 KPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKA----AGIDTILVLTGVYSPEDLEKAEHKPDYVVDDLKEA 75 (75)
T ss_dssp TTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHH----TTSEEEEESSSSSCCCGHHHSSSTTSEEESSGGGH
T ss_pred CCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHH----cCCcEEEECCCCCCHHHHhccCCCCCEEECCHHhC
Confidence 699999999999999999999999999 999999999 89999999999999988887778999999999875
No 79
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=99.53 E-value=7.3e-15 Score=120.61 Aligned_cols=91 Identities=11% Similarity=-0.018 Sum_probs=79.0
Q ss_pred CCCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhcCCCC-CCceEecCCCC--CcHHHHHHHHhcCCCCCCcEEE
Q 024375 137 ANRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTI-TPDRLYGLGTG--PKVNVLKQLQKKPEHQGLRLHF 211 (268)
Q Consensus 137 ~~~lypGv~e~L~--~~g~~l~IvTnK~~~~~~~~L~~~~gl~~-~f~~i~g~~~~--pkp~~l~~~~~~l~~~~~~~~~ 211 (268)
.+.++||+.|+|+ +++++++|+||++...++.+|++ +++.. +|+.|++.+.. .||. +.+++++++.+|++|+|
T Consensus 43 ~v~l~pG~~e~L~~L~~~~~l~I~Ts~~~~~~~~il~~-l~~~~~~f~~i~~~~d~~~~KP~-~~k~l~~l~~~p~~~i~ 120 (148)
T smart00577 43 YVKKRPGVDEFLKRASELFELVVFTAGLRMYADPVLDL-LDPKKYFGYRRLFRDECVFVKGK-YVKDLSLLGRDLSNVII 120 (148)
T ss_pred EEEECCCHHHHHHHHHhccEEEEEeCCcHHHHHHHHHH-hCcCCCEeeeEEECccccccCCe-EeecHHHcCCChhcEEE
Confidence 4689999999999 78899999999999999999995 99965 56999987632 5666 88889999999999999
Q ss_pred EcCcHhhHHHhhccCccCCCcE
Q 024375 212 VEDRLATLKNVIKEPELDGWNL 233 (268)
Q Consensus 212 VGDs~~Di~aa~~~~~~agi~~ 233 (268)
|||+.+|+++|++ +||++
T Consensus 121 i~Ds~~~~~aa~~----ngI~i 138 (148)
T smart00577 121 IDDSPDSWPFHPE----NLIPI 138 (148)
T ss_pred EECCHHHhhcCcc----CEEEe
Confidence 9999999999987 56544
No 80
>PLN02645 phosphoglycolate phosphatase
Probab=99.52 E-value=8e-15 Score=134.35 Aligned_cols=111 Identities=19% Similarity=0.182 Sum_probs=92.9
Q ss_pred CCcEEEEcCCchHH-HHHHHHHhcCCCCCCceEecCC-------CCCcHHHHHHHHhcCCCCCCcEEEEcCcH-hhHHHh
Q 024375 152 SSRIYIVTSNQSRF-VETLLRELAGVTITPDRLYGLG-------TGPKVNVLKQLQKKPEHQGLRLHFVEDRL-ATLKNV 222 (268)
Q Consensus 152 g~~l~IvTnK~~~~-~~~~L~~~~gl~~~f~~i~g~~-------~~pkp~~l~~~~~~l~~~~~~~~~VGDs~-~Di~aa 222 (268)
+-.++|+|||+..+ ....+. +.|+..+|+.|.+.. .||+|.++..+++++++++++++||||+. +||.+|
T Consensus 186 ~g~~~i~tn~d~~~~~~~~~~-~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A 264 (311)
T PLN02645 186 PGCLFIATNRDAVTHLTDAQE-WAGAGSMVGAIKGSTEREPLVVGKPSTFMMDYLANKFGIEKSQICMVGDRLDTDILFG 264 (311)
T ss_pred CCCEEEEeCCCCCCCCCCCCC-ccchHHHHHHHHHHhCCCcccCCCChHHHHHHHHHHcCCCcccEEEEcCCcHHHHHHH
Confidence 44699999999865 344455 378777888887643 16999999999999999999999999997 999999
Q ss_pred hccCccCCCcEEEEecCCCCHHHHHhc--CCCCCeeecChhHHhhhc
Q 024375 223 IKEPELDGWNLYLVDWGYNTPKERAEA--ASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 223 ~~~~~~agi~~i~v~wGy~~~~el~~~--~~~P~~~~~~~~~~~~~~ 267 (268)
++ +|+++|+|.||+++.+++... ...|++++.++++|...+
T Consensus 265 ~~----aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~~l~~~~ 307 (311)
T PLN02645 265 QN----GGCKTLLVLSGVTSESMLLSPENKIQPDFYTSKISDFLTLK 307 (311)
T ss_pred HH----cCCCEEEEcCCCCCHHHHHhccCCCCCCEEECCHHHHHHHh
Confidence 99 899999999999998887653 357999999999997665
No 81
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.49 E-value=7.1e-14 Score=115.51 Aligned_cols=102 Identities=13% Similarity=0.057 Sum_probs=85.4
Q ss_pred HHHHHHhCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhh
Q 024375 144 VSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVI 223 (268)
Q Consensus 144 v~e~L~~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~ 223 (268)
+.+.|+++|++++|+||++...+..++++ +|+..+|+. .+|||+++.++++++++++++|+||||+.+|+.+++
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~-~gi~~~~~~-----~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~ 109 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKT-LGITHLYQG-----QSNKLIAFSDILEKLALAPENVAYIGDDLIDWPVME 109 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHH-cCCCEEEec-----ccchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHH
Confidence 56666689999999999999999999996 999877653 268999999999999999999999999999999999
Q ss_pred ccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhH
Q 024375 224 KEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSD 262 (268)
Q Consensus 224 ~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~ 262 (268)
+ +|++ ++|.++. +.++ ..|++++.++.+
T Consensus 110 ~----ag~~-~~v~~~~---~~~~---~~a~~i~~~~~~ 137 (154)
T TIGR01670 110 K----VGLS-VAVADAH---PLLI---PRADYVTRIAGG 137 (154)
T ss_pred H----CCCe-EecCCcC---HHHH---HhCCEEecCCCC
Confidence 8 7776 7777665 2233 347888888753
No 82
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=99.46 E-value=2.8e-12 Score=111.50 Aligned_cols=86 Identities=16% Similarity=0.157 Sum_probs=74.0
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEec-------CC------C-CCcHHHHHHHHh
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYG-------LG------T-GPKVNVLKQLQK 200 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g-------~~------~-~pkp~~l~~~~~ 200 (268)
.+++||+.++++ ++|.+++|+|+-+..+++++.+. +|++..+....- +. . ..|.+.+.++++
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~-lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~ 154 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAER-LGIDYVVANELEIDDGKLTGRVVGPICDGEGKAKALRELAA 154 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHH-hCCchheeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHH
Confidence 589999999999 89999999999999999999996 999876544332 11 1 157889999999
Q ss_pred cCCCCCCcEEEEcCcHhhHHHhhc
Q 024375 201 KPEHQGLRLHFVEDRLATLKNVIK 224 (268)
Q Consensus 201 ~l~~~~~~~~~VGDs~~Di~aa~~ 224 (268)
++|+++++++++|||.+|+-+=+.
T Consensus 155 ~~g~~~~~~~a~gDs~nDlpml~~ 178 (212)
T COG0560 155 ELGIPLEETVAYGDSANDLPMLEA 178 (212)
T ss_pred HcCCCHHHeEEEcCchhhHHHHHh
Confidence 999999999999999999999887
No 83
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=99.43 E-value=4.6e-13 Score=130.07 Aligned_cols=84 Identities=20% Similarity=0.311 Sum_probs=73.6
Q ss_pred CCccHHHHHH---hCCCcEEEEcCCch------------HHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHh
Q 024375 140 LYPGVSDALK---LASSRIYIVTSNQS------------RFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQK 200 (268)
Q Consensus 140 lypGv~e~L~---~~g~~l~IvTnK~~------------~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~ 200 (268)
+||||.+.|+ ++|++++|+||++. ..+..+|++ +|+. |+.++|.+ .||+|.++.++++
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~-lgip--fdviia~~~~~~RKP~pGm~~~a~~ 274 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAK-LGVP--FQVFIAIGAGFYRKPLTGMWDHLKE 274 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHH-cCCc--eEEEEeCCCCCCCCCCHHHHHHHHH
Confidence 6999999999 89999999999988 568899995 9984 88888765 2599999999999
Q ss_pred cCC----CCCCcEEEEcCcHhhHHHhhccC
Q 024375 201 KPE----HQGLRLHFVEDRLATLKNVIKEP 226 (268)
Q Consensus 201 ~l~----~~~~~~~~VGDs~~Di~aa~~~~ 226 (268)
+++ +++++++||||+..|+++|+++|
T Consensus 275 ~~~~~~~Id~~~S~~VGDaagr~~~g~~ag 304 (526)
T TIGR01663 275 EANDGTEIQEDDCFFVGDAAGRPANGKAAG 304 (526)
T ss_pred hcCcccCCCHHHeEEeCCcccchHHHHhcC
Confidence 884 88999999999999999988743
No 84
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.40 E-value=1.8e-12 Score=115.50 Aligned_cols=109 Identities=12% Similarity=0.086 Sum_probs=75.9
Q ss_pred CCccHHHHHH---hCCCcEEEEcCCc-----hHHHHHHHHHhcCCCC---CCceEecCCCC-CcHHHHHHHHhcCCCCCC
Q 024375 140 LYPGVSDALK---LASSRIYIVTSNQ-----SRFVETLLRELAGVTI---TPDRLYGLGTG-PKVNVLKQLQKKPEHQGL 207 (268)
Q Consensus 140 lypGv~e~L~---~~g~~l~IvTnK~-----~~~~~~~L~~~~gl~~---~f~~i~g~~~~-pkp~~l~~~~~~l~~~~~ 207 (268)
.|+++.++++ ..+..+.|+|+++ ....+.+++. +++.. ++..+-....+ .|+..+..+++.+|++++
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~gi~~~ 216 (272)
T PRK10530 138 TFTQVDSLAQAARQVNAIWKFALTHEDLPQLQHFAKHVEHE-LGLECEWSWHDQVDIARKGNSKGKRLTQWVEAQGWSMK 216 (272)
T ss_pred ceEEcccHHHHHhhcCCcEEEEEecCCHHHHHHHHHHHhhh-cCceEEEecCceEEEecCCCChHHHHHHHHHHcCCCHH
Confidence 4677877776 4567778888765 3456666664 67542 11111111112 799999999999999999
Q ss_pred cEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecCh
Q 024375 208 RLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQL 260 (268)
Q Consensus 208 ~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~ 260 (268)
++++|||+.+|+.+++. || ++|.||.+ .+++++. +++++.+.
T Consensus 217 e~i~~GD~~NDi~m~~~----ag---~~vamgna-~~~lk~~---Ad~v~~~n 258 (272)
T PRK10530 217 NVVAFGDNFNDISMLEA----AG---LGVAMGNA-DDAVKAR---ADLVIGDN 258 (272)
T ss_pred HeEEeCCChhhHHHHHh----cC---ceEEecCc-hHHHHHh---CCEEEecC
Confidence 99999999999999998 66 47888865 4556532 46777553
No 85
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=99.40 E-value=1.6e-12 Score=110.47 Aligned_cols=104 Identities=17% Similarity=0.210 Sum_probs=83.4
Q ss_pred HHHHhCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhcc
Q 024375 146 DALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKE 225 (268)
Q Consensus 146 e~L~~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~ 225 (268)
+.|.++|++++|+||++...+..++++ +|+..+|. |. ++|++.+.++++++|+++++++||||+.+|+.++++
T Consensus 58 ~~L~~~Gi~v~I~T~~~~~~v~~~l~~-lgl~~~f~---g~--~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~- 130 (183)
T PRK09484 58 RCLLTSGIEVAIITGRKSKLVEDRMTT-LGITHLYQ---GQ--SNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEK- 130 (183)
T ss_pred HHHHHCCCEEEEEeCCCcHHHHHHHHH-cCCceeec---CC--CcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHH-
Confidence 444579999999999999999999996 99987775 32 478999999999999999999999999999999998
Q ss_pred CccCCCcEEEEecCCCCHHHHHhcCCCCCeeec------ChhHHhhh
Q 024375 226 PELDGWNLYLVDWGYNTPKERAEAASMPRIQLL------QLSDFCTK 266 (268)
Q Consensus 226 ~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~------~~~~~~~~ 266 (268)
+|+++ +|. +..++... .|++++. .+.+|...
T Consensus 131 ---aG~~~-~v~----~~~~~~~~--~a~~v~~~~~g~g~~~el~~~ 167 (183)
T PRK09484 131 ---VGLSV-AVA----DAHPLLLP--RADYVTRIAGGRGAVREVCDL 167 (183)
T ss_pred ---CCCeE-ecC----ChhHHHHH--hCCEEecCCCCCCHHHHHHHH
Confidence 78874 453 33334333 4678886 56776543
No 86
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=99.39 E-value=6.7e-13 Score=111.51 Aligned_cols=73 Identities=19% Similarity=0.209 Sum_probs=67.2
Q ss_pred HHHHhCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhc
Q 024375 146 DALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIK 224 (268)
Q Consensus 146 e~L~~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~ 224 (268)
..|+++|++++|+|||+...+++++++ +|+..+|+.+ +|||+++..+++++++++++++||||+.+|+.+++.
T Consensus 44 ~~L~~~Gi~laIiT~k~~~~~~~~l~~-lgi~~~f~~~-----kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ 116 (169)
T TIGR02726 44 IVLQLCGIDVAIITSKKSGAVRHRAEE-LKIKRFHEGI-----KKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKR 116 (169)
T ss_pred HHHHHCCCEEEEEECCCcHHHHHHHHH-CCCcEEEecC-----CCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHH
Confidence 455578999999999999999999995 9999888743 699999999999999999999999999999999998
No 87
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=99.37 E-value=3.5e-12 Score=99.89 Aligned_cols=95 Identities=25% Similarity=0.218 Sum_probs=85.3
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC----C----------------CCcHH
Q 024375 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----T----------------GPKVN 193 (268)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~----------------~pkp~ 193 (268)
...++||+.++|+ ++|++++|+||.....++..++. +|+..+|+.+++.+ . +|+++
T Consensus 22 ~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (139)
T cd01427 22 ELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEE-LGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPD 100 (139)
T ss_pred cCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHH-cCCchhhhheeccchhhhhcccccccccccccccCCCCHH
Confidence 3589999999999 68999999999999999999996 99988888888754 1 68899
Q ss_pred HHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEE
Q 024375 194 VLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLV 236 (268)
Q Consensus 194 ~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v 236 (268)
.+..++++++..+++++||||+.+|+.++++ +|+++++|
T Consensus 101 ~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~----~g~~~i~v 139 (139)
T cd01427 101 KLLAALKLLGVDPEEVLMVGDSLNDIEMAKA----AGGLGVAV 139 (139)
T ss_pred HHHHHHHHcCCChhhEEEeCCCHHHHHHHHH----cCCceeeC
Confidence 9999999999999999999999999999998 78888875
No 88
>PRK08238 hypothetical protein; Validated
Probab=99.35 E-value=3.6e-11 Score=116.14 Aligned_cols=108 Identities=14% Similarity=0.115 Sum_probs=80.1
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCC----C--CcHHHHHHHHhcCCCCCCcE
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT----G--PKVNVLKQLQKKPEHQGLRL 209 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~----~--pkp~~l~~~~~~l~~~~~~~ 209 (268)
+++||+.++|+ ++|++++|+||+++..++.++++ +|+ |+.++|++. + +|++.+. +.++ .+++
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~-lGl---Fd~Vigsd~~~~~kg~~K~~~l~---~~l~--~~~~ 142 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAH-LGL---FDGVFASDGTTNLKGAAKAAALV---EAFG--ERGF 142 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCC---CCEEEeCCCccccCCchHHHHHH---HHhC--ccCe
Confidence 57799999999 79999999999999999999995 997 899998762 2 3555444 3333 3558
Q ss_pred EEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChh
Q 024375 210 HFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLS 261 (268)
Q Consensus 210 ~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~ 261 (268)
+|+|||.+|+.+++. +| ..++|.=+-+- ....+....|...+....
T Consensus 143 ~yvGDS~~Dlp~~~~----A~-~av~Vn~~~~l-~~~a~~~~~~~~~~~~~~ 188 (479)
T PRK08238 143 DYAGNSAADLPVWAA----AR-RAIVVGASPGV-ARAARALGPVERVFPPRP 188 (479)
T ss_pred eEecCCHHHHHHHHh----CC-CeEEECCCHHH-HHHHHHcCCcceecCCCc
Confidence 999999999999998 55 55777655432 233333446666665444
No 89
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=99.35 E-value=4.8e-11 Score=103.58 Aligned_cols=103 Identities=16% Similarity=0.133 Sum_probs=75.3
Q ss_pred CCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH----hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEe
Q 024375 109 SENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK----LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLY 184 (268)
Q Consensus 109 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~----~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~ 184 (268)
|++++++++..+.|++.|.. .+.+|||+.++|+ ++|++++|||||++..++.+.+. .++..- +.++
T Consensus 72 g~~~~~l~~~~~~f~~~~~~--------~~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~-~~~~~~-~~~i 141 (210)
T TIGR01545 72 GHREAHLQDLEADFVAAFRD--------KVTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFD-SNFIHR-LNLI 141 (210)
T ss_pred CCCHHHHHHHHHHHHHHHHH--------hCCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHh-cccccc-CcEE
Confidence 77888888888888877643 2478999999994 47999999999999999999984 665332 3344
Q ss_pred cCC----C-----C------CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhc
Q 024375 185 GLG----T-----G------PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIK 224 (268)
Q Consensus 185 g~~----~-----~------pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~ 224 (268)
|.+ . + -|...+.+.+ +.+.+.+.+-|||.+|+..-.-
T Consensus 142 ~t~le~~~gg~~~g~~c~g~~Kv~rl~~~~---~~~~~~~~aYsDS~~D~pmL~~ 193 (210)
T TIGR01545 142 ASQIERGNGGWVLPLRCLGHEKVAQLEQKI---GSPLKLYSGYSDSKQDNPLLAF 193 (210)
T ss_pred EEEeEEeCCceEcCccCCChHHHHHHHHHh---CCChhheEEecCCcccHHHHHh
Confidence 432 1 1 2344444444 4455678899999999998776
No 90
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=99.32 E-value=4.1e-12 Score=116.87 Aligned_cols=86 Identities=17% Similarity=0.121 Sum_probs=79.4
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHh----cCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEE
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLREL----AGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLH 210 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~----~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~ 210 (268)
..+|||+.++|+ ++|++++|||||+...+..+|+ + +++..+|+.+.+. .+|||+.+.++++++++.+++++
T Consensus 30 ~~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~-~~~~~~~~~~~f~~~~~~-~~pk~~~i~~~~~~l~i~~~~~v 107 (320)
T TIGR01686 30 SPLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFE-RRKDFILQAEDFDARSIN-WGPKSESLRKIAKKLNLGTDSFL 107 (320)
T ss_pred CccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHH-hCccccCcHHHeeEEEEe-cCchHHHHHHHHHHhCCCcCcEE
Confidence 467999999999 7999999999999999999999 7 7888899988765 36999999999999999999999
Q ss_pred EEcCcHhhHHHhhcc
Q 024375 211 FVEDRLATLKNVIKE 225 (268)
Q Consensus 211 ~VGDs~~Di~aa~~~ 225 (268)
||||++.|+.+++++
T Consensus 108 fidD~~~d~~~~~~~ 122 (320)
T TIGR01686 108 FIDDNPAERANVKIT 122 (320)
T ss_pred EECCCHHHHHHHHHH
Confidence 999999999999983
No 91
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=99.31 E-value=4.4e-11 Score=107.20 Aligned_cols=120 Identities=21% Similarity=0.283 Sum_probs=91.7
Q ss_pred CCCCCccHHHHHH--hCCCcEEEEcCCchHH------------HHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcC
Q 024375 137 ANRLYPGVSDALK--LASSRIYIVTSNQSRF------------VETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKP 202 (268)
Q Consensus 137 ~~~lypGv~e~L~--~~g~~l~IvTnK~~~~------------~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l 202 (268)
...-|.-..+++. .+| ...|+||-..-. ....++...|-. . .++| ||.|.++..+++.+
T Consensus 131 ~~~~~e~l~~a~~~i~~g-~~fI~tNpD~~~p~~~g~~pgaGai~~~~~~~tg~~-~--~~~G---KP~~~i~~~al~~~ 203 (269)
T COG0647 131 RTLTYEKLAEALLAIAAG-APFIATNPDLTVPTERGLRPGAGAIAALLEQATGRE-P--TVIG---KPSPAIYEAALEKL 203 (269)
T ss_pred CCCCHHHHHHHHHHHHcC-CcEEEeCCCccccCCCCCccCcHHHHHHHHHhhCCc-c--cccC---CCCHHHHHHHHHHh
Confidence 3445555566666 667 668999876543 223333212211 1 2334 68999999999999
Q ss_pred CCCCCcEEEEcCcH-hhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 203 EHQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 203 ~~~~~~~~~VGDs~-~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
+..+++++||||+. +||.+|++ +|+.++.|..|..+.+++......|++++.++.++...+
T Consensus 204 ~~~~~~~~mVGD~~~TDI~~a~~----~G~~t~LV~TGv~~~~~~~~~~~~p~~v~~sl~~~~~~~ 265 (269)
T COG0647 204 GLDRSEVLMVGDRLDTDILGAKA----AGLDTLLVLTGVSSAEDLDRAEVKPTYVVDSLAELITAL 265 (269)
T ss_pred CCCcccEEEEcCCchhhHHHHHH----cCCCEEEEccCCCChhhhhhhccCCcchHhhHHHHHhhh
Confidence 99999999999996 79999998 899999999999999888877789999999999986544
No 92
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=99.26 E-value=2e-10 Score=101.11 Aligned_cols=108 Identities=19% Similarity=0.273 Sum_probs=85.8
Q ss_pred CCCCCccHHHHHH-----hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC-----CC-----------------
Q 024375 137 ANRLYPGVSDALK-----LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-----TG----------------- 189 (268)
Q Consensus 137 ~~~lypGv~e~L~-----~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~-----~~----------------- 189 (268)
..++-||+.++++ +.|+.+.|+|.-..-+++.+|++ +|+...|+.|++.. .+
T Consensus 69 ~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~-~gl~~~f~~I~TNpa~~~~~G~l~v~pyh~h~C~~C~~ 147 (234)
T PF06888_consen 69 SIPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEH-HGLRDCFSEIFTNPACFDADGRLRVRPYHSHGCSLCPP 147 (234)
T ss_pred cCCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHh-CCCccccceEEeCCceecCCceEEEeCccCCCCCcCCC
Confidence 3688899999999 36999999999999999999995 99999999888742 10
Q ss_pred --CcHHHHHHHHhcC---CCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHh
Q 024375 190 --PKVNVLKQLQKKP---EHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAE 248 (268)
Q Consensus 190 --pkp~~l~~~~~~l---~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~ 248 (268)
-|-.++.++++.. |..-.+++||||+.+|.-.+.+ ...-+++.+.=||.-...+.+
T Consensus 148 NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~---L~~~D~v~~R~~~~l~~~i~~ 208 (234)
T PF06888_consen 148 NMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALR---LRPRDVVFPRKGYPLHKLIQK 208 (234)
T ss_pred ccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccc---cCCCCEEecCCCChHHHHHhc
Confidence 2446777777653 5667899999999999988876 234678999999965555544
No 93
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=99.25 E-value=2.3e-10 Score=98.28 Aligned_cols=97 Identities=14% Similarity=0.158 Sum_probs=81.1
Q ss_pred CCCCccHHHHHHh-CCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC--C--------CCcHHHHHHHHhcCCCC-
Q 024375 138 NRLYPGVSDALKL-ASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG--T--------GPKVNVLKQLQKKPEHQ- 205 (268)
Q Consensus 138 ~~lypGv~e~L~~-~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~--~--------~pkp~~l~~~~~~l~~~- 205 (268)
.+|=|-.+++|-+ +..+..|.||..+..|.++|++ +||...|+.|++-+ . ||.++.++.+++..|+.
T Consensus 99 LkPD~~LRnlLL~l~~r~k~~FTNa~k~HA~r~Lk~-LGieDcFegii~~e~~np~~~~~vcKP~~~afE~a~k~agi~~ 177 (244)
T KOG3109|consen 99 LKPDPVLRNLLLSLKKRRKWIFTNAYKVHAIRILKK-LGIEDCFEGIICFETLNPIEKTVVCKPSEEAFEKAMKVAGIDS 177 (244)
T ss_pred cCCCHHHHHHHHhCccccEEEecCCcHHHHHHHHHH-hChHHhccceeEeeccCCCCCceeecCCHHHHHHHHHHhCCCC
Confidence 3455556787772 2222899999999999999996 99999999999744 1 38899999999999998
Q ss_pred CCcEEEEcCcHhhHHHhhccCccCCCcEEEEecC
Q 024375 206 GLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWG 239 (268)
Q Consensus 206 ~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wG 239 (268)
|.+++|+.||.+.|++|++ .|+.++.|.--
T Consensus 178 p~~t~FfDDS~~NI~~ak~----vGl~tvlv~~~ 207 (244)
T KOG3109|consen 178 PRNTYFFDDSERNIQTAKE----VGLKTVLVGRE 207 (244)
T ss_pred cCceEEEcCchhhHHHHHh----ccceeEEEEee
Confidence 9999999999999999999 78888887543
No 94
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=99.25 E-value=3e-11 Score=118.45 Aligned_cols=116 Identities=16% Similarity=0.228 Sum_probs=90.2
Q ss_pred cccCCCCCccHHHHHH---hCCC-cEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcE
Q 024375 134 WIGANRLYPGVSDALK---LASS-RIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRL 209 (268)
Q Consensus 134 ~~~~~~lypGv~e~L~---~~g~-~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~ 209 (268)
......+|||+.++|+ ++|+ +++|+||++...++.++++ +|++.+|..+. ..+|++.++++.+ ..+++
T Consensus 357 i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~-lgi~~~f~~~~---p~~K~~~i~~l~~----~~~~v 428 (536)
T TIGR01512 357 ILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARE-LGIDEVHAELL---PEDKLEIVKELRE----KYGPV 428 (536)
T ss_pred EEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHH-cCChhhhhccC---cHHHHHHHHHHHh----cCCEE
Confidence 3445689999999999 7999 9999999999999999996 99988876443 1256666666543 44789
Q ss_pred EEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeee--cChhHHhhhc
Q 024375 210 HFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQL--LQLSDFCTKL 267 (268)
Q Consensus 210 ~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~--~~~~~~~~~~ 267 (268)
+||||+.+|+.++++ || ++++||+...+.... .+|+++ .++++|...+
T Consensus 429 ~~vGDg~nD~~al~~----A~---vgia~g~~~~~~~~~---~ad~vl~~~~l~~l~~~i 478 (536)
T TIGR01512 429 AMVGDGINDAPALAA----AD---VGIAMGASGSDVAIE---TADVVLLNDDLSRLPQAI 478 (536)
T ss_pred EEEeCCHHHHHHHHh----CC---EEEEeCCCccHHHHH---hCCEEEECCCHHHHHHHH
Confidence 999999999999998 66 699999743332222 356888 7898886654
No 95
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=99.24 E-value=3.2e-12 Score=112.92 Aligned_cols=92 Identities=12% Similarity=0.072 Sum_probs=79.7
Q ss_pred CCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceE--ecCC----CCCcHHHHHHHHhcCCCC-CCcE
Q 024375 140 LYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRL--YGLG----TGPKVNVLKQLQKKPEHQ-GLRL 209 (268)
Q Consensus 140 lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i--~g~~----~~pkp~~l~~~~~~l~~~-~~~~ 209 (268)
-|||+.++|+ ++|+++ |+||++.......+.. +|...+|..+ +|.+ .||+|++++.++++++.. ++++
T Consensus 139 ~~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~-~~~g~~~~~i~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~~ 216 (242)
T TIGR01459 139 DLDEFDELFAPIVARKIPN-ICANPDRGINQHGIYR-YGAGYYAELIKQLGGKVIYSGKPYPAIFHKALKECSNIPKNRM 216 (242)
T ss_pred CHHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceE-ecccHHHHHHHHhCCcEecCCCCCHHHHHHHHHHcCCCCcccE
Confidence 3899999998 689997 9999999999888884 8888888766 5654 259999999999999875 5789
Q ss_pred EEEcCc-HhhHHHhhccCccCCCcEEEEe
Q 024375 210 HFVEDR-LATLKNVIKEPELDGWNLYLVD 237 (268)
Q Consensus 210 ~~VGDs-~~Di~aa~~~~~~agi~~i~v~ 237 (268)
+||||+ .+||.+|++ +|+++++|.
T Consensus 217 ~~vGD~~~~Di~~a~~----~G~~~i~v~ 241 (242)
T TIGR01459 217 LMVGDSFYTDILGANR----LGIDTALVL 241 (242)
T ss_pred EEECCCcHHHHHHHHH----CCCeEEEEe
Confidence 999999 699999998 899999986
No 96
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=99.23 E-value=3.7e-11 Score=118.35 Aligned_cols=114 Identities=21% Similarity=0.275 Sum_probs=89.1
Q ss_pred ccCCCCCccHHHHHH---hCC-CcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEE
Q 024375 135 IGANRLYPGVSDALK---LAS-SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLH 210 (268)
Q Consensus 135 ~~~~~lypGv~e~L~---~~g-~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~ 210 (268)
.....+|||+.++|+ ++| ++++|+||++...+++++++ +|++.+|..+.. .+|++.++++.+ .+++++
T Consensus 380 ~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~-lgi~~~f~~~~p---~~K~~~v~~l~~----~~~~v~ 451 (556)
T TIGR01525 380 ALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAE-LGIDEVHAELLP---EDKLAIVKELQE----EGGVVA 451 (556)
T ss_pred EecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHH-hCCCeeeccCCH---HHHHHHHHHHHH----cCCEEE
Confidence 345789999999999 789 99999999999999999996 999888765422 256666666553 456999
Q ss_pred EEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeec--ChhHHhhhc
Q 024375 211 FVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLL--QLSDFCTKL 267 (268)
Q Consensus 211 ~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~--~~~~~~~~~ 267 (268)
||||+.+|+.++++ || ++|.||.++. .... .+|+++. ++..+...+
T Consensus 452 ~vGDg~nD~~al~~----A~---vgia~g~~~~--~~~~--~Ad~vi~~~~~~~l~~~i 499 (556)
T TIGR01525 452 MVGDGINDAPALAA----AD---VGIAMGAGSD--VAIE--AADIVLLNDDLSSLPTAI 499 (556)
T ss_pred EEECChhHHHHHhh----CC---EeEEeCCCCH--HHHH--hCCEEEeCCCHHHHHHHH
Confidence 99999999999998 67 8999995433 3322 4678888 677775543
No 97
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.10 E-value=3.4e-10 Score=101.66 Aligned_cols=72 Identities=15% Similarity=0.059 Sum_probs=56.1
Q ss_pred hCCCcEEEE---cCCchHHHHHHHHHhcCCC----CCCceEecCCCCCcHHHHHHHHhcCCCCC-CcEEEEcCcHhhHHH
Q 024375 150 LASSRIYIV---TSNQSRFVETLLRELAGVT----ITPDRLYGLGTGPKVNVLKQLQKKPEHQG-LRLHFVEDRLATLKN 221 (268)
Q Consensus 150 ~~g~~l~Iv---TnK~~~~~~~~L~~~~gl~----~~f~~i~g~~~~pkp~~l~~~~~~l~~~~-~~~~~VGDs~~Di~a 221 (268)
..++...++ |++..+.+.+.++. +++. .+|..|+..+ .|...+.++++.+++++ +++++|||+.+|+.+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~ei~~~~--~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m 222 (273)
T PRK00192 146 DREFSEPFLWNGSEAAKERFEEALKR-LGLKVTRGGRFLHLLGGG--DKGKAVRWLKELYRRQDGVETIALGDSPNDLPM 222 (273)
T ss_pred hcccCCceeecCchHHHHHHHHHHHH-cCCEEEECCeEEEEeCCC--CHHHHHHHHHHHHhccCCceEEEEcCChhhHHH
Confidence 344554444 77777778888884 7775 4455555544 67788999999999999 999999999999999
Q ss_pred hhc
Q 024375 222 VIK 224 (268)
Q Consensus 222 a~~ 224 (268)
.+.
T Consensus 223 ~~~ 225 (273)
T PRK00192 223 LEA 225 (273)
T ss_pred HHh
Confidence 998
No 98
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=99.10 E-value=1.7e-09 Score=97.00 Aligned_cols=82 Identities=17% Similarity=0.200 Sum_probs=66.2
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCch---HHHHHHHHHhcCCCC-CCceEecCCC-CCcHHHHHHHHhcCCCCCCc
Q 024375 137 ANRLYPGVSDALK---LASSRIYIVTSNQS---RFVETLLRELAGVTI-TPDRLYGLGT-GPKVNVLKQLQKKPEHQGLR 208 (268)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~l~IvTnK~~---~~~~~~L~~~~gl~~-~f~~i~g~~~-~pkp~~l~~~~~~l~~~~~~ 208 (268)
...++||+.++|+ ++|++++|+||++. +.+...|++ +|+.. .++.|+..+. .+|+.....+.+.+++
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk-~Gi~~~~~d~lllr~~~~~K~~rr~~I~~~y~I---- 190 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKR-FGFPQADEEHLLLKKDKSSKESRRQKVQKDYEI---- 190 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHH-cCcCCCCcceEEeCCCCCCcHHHHHHHHhcCCE----
Confidence 3679999999999 89999999999884 456688886 99975 4577776543 4888888888777776
Q ss_pred EEEEcCcHhhHHHhh
Q 024375 209 LHFVEDRLATLKNVI 223 (268)
Q Consensus 209 ~~~VGDs~~Di~aa~ 223 (268)
++||||+.+|+.+..
T Consensus 191 vl~vGD~~~Df~~~~ 205 (266)
T TIGR01533 191 VLLFGDNLLDFDDFF 205 (266)
T ss_pred EEEECCCHHHhhhhh
Confidence 799999999997644
No 99
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=99.09 E-value=3.7e-10 Score=104.48 Aligned_cols=99 Identities=16% Similarity=0.194 Sum_probs=81.2
Q ss_pred cCCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhc-C-------CCCCCceEecCCCCC--------------
Q 024375 136 GANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELA-G-------VTITPDRLYGLGTGP-------------- 190 (268)
Q Consensus 136 ~~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~-g-------l~~~f~~i~g~~~~p-------------- 190 (268)
..+.++||+.++|+ ++|++++|+|||+..+++.+|+. + | |..|||.|+++..||
T Consensus 181 ~yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~-l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v~~ 259 (343)
T TIGR02244 181 KYVLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKY-LLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQVDV 259 (343)
T ss_pred HHhccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-hhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEEeC
Confidence 34678999999999 79999999999999999999995 5 7 899999999875332
Q ss_pred -----cH---H-----------HHHHHHhcCCCCCCcEEEEcCcH-hhHHHhhccCccCCCcEEEEec
Q 024375 191 -----KV---N-----------VLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDW 238 (268)
Q Consensus 191 -----kp---~-----------~l~~~~~~l~~~~~~~~~VGDs~-~Di~aa~~~~~~agi~~i~v~w 238 (268)
++ . -+..+.+.++..+++++||||+. .||.+++.. +|+++++|.-
T Consensus 260 ~~g~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~---~Gw~TvlI~p 324 (343)
T TIGR02244 260 ETGSLKWGEVDGLEPGKVYSGGSLKQFHELLKWRGKEVLYFGDHIYGDLLRSKKK---RGWRTAAIIP 324 (343)
T ss_pred CCCcccCCccccccCCCeEeCCCHHHHHHHHCCCCCcEEEECCcchHHHHhhHHh---cCcEEEEEch
Confidence 11 0 24566777789999999999976 799999832 8999999964
No 100
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=99.08 E-value=5.1e-10 Score=92.47 Aligned_cols=88 Identities=19% Similarity=0.234 Sum_probs=76.1
Q ss_pred CCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEEEcCcH
Q 024375 140 LYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRL 216 (268)
Q Consensus 140 lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~VGDs~ 216 (268)
.=|.+.+-+. ++|+++.|+||+.+.-+...+++ +|+. .|.++ .||-+..+.++++++++++++|+||||+.
T Consensus 47 ~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~-l~v~----fi~~A-~KP~~~~fr~Al~~m~l~~~~vvmVGDqL 120 (175)
T COG2179 47 ATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEK-LGVP----FIYRA-KKPFGRAFRRALKEMNLPPEEVVMVGDQL 120 (175)
T ss_pred CCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhh-cCCc----eeecc-cCccHHHHHHHHHHcCCChhHEEEEcchh
Confidence 3466666666 79999999999999999999996 8874 45443 36899999999999999999999999997
Q ss_pred -hhHHHhhccCccCCCcEEEEe
Q 024375 217 -ATLKNVIKEPELDGWNLYLVD 237 (268)
Q Consensus 217 -~Di~aa~~~~~~agi~~i~v~ 237 (268)
+|+.+|++ +|+.||.|.
T Consensus 121 ~TDVlggnr----~G~~tIlV~ 138 (175)
T COG2179 121 FTDVLGGNR----AGMRTILVE 138 (175)
T ss_pred hhhhhcccc----cCcEEEEEE
Confidence 79999999 899999984
No 101
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=99.07 E-value=1.3e-09 Score=91.63 Aligned_cols=78 Identities=18% Similarity=0.313 Sum_probs=60.9
Q ss_pred ccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCC-------------C--C--cHHHHHHH---
Q 024375 142 PGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT-------------G--P--KVNVLKQL--- 198 (268)
Q Consensus 142 pGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~-------------~--p--kp~~l~~~--- 198 (268)
|++.++|+ ++|++++|+|+.+...++.+++. +|+... .++|.+. + . |...+.++
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~-~~i~~~--~v~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~ 168 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAER-LGIDDD--NVIGNELFDNGGGIFTGRITGSNCGGKAEALKELYIR 168 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHH-TTSSEG--GEEEEEEECTTCCEEEEEEEEEEESHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-cCCCce--EEEEEeeeecccceeeeeECCCCCCcHHHHHHHHHHH
Confidence 44449997 79999999999999999999995 998642 2332210 1 2 88888888
Q ss_pred HhcCCCCCCcEEEEcCcHhhHHHhh
Q 024375 199 QKKPEHQGLRLHFVEDRLATLKNVI 223 (268)
Q Consensus 199 ~~~l~~~~~~~~~VGDs~~Di~aa~ 223 (268)
... +.....++|||||.+|+.+.+
T Consensus 169 ~~~-~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 169 DEE-DIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHH-THTCCEEEEEESSGGGHHHHH
T ss_pred hhc-CCCCCeEEEEECCHHHHHHhC
Confidence 445 778889999999999998764
No 102
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=99.02 E-value=1.9e-09 Score=106.40 Aligned_cols=110 Identities=17% Similarity=0.286 Sum_probs=84.8
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC-CCCcHHHHHHHHhcCCCCCCcEEEE
Q 024375 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-TGPKVNVLKQLQKKPEHQGLRLHFV 212 (268)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~-~~pkp~~l~~~~~~l~~~~~~~~~V 212 (268)
..+++||+.++|+ ++|++++|+||+++..++.++++ +|++ ++..- ..+|++.++++.+ .+++++||
T Consensus 403 ~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~-lgi~-----~~~~~~p~~K~~~v~~l~~----~~~~v~~V 472 (562)
T TIGR01511 403 EDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKE-LGIN-----VRAEVLPDDKAALIKELQE----KGRVVAMV 472 (562)
T ss_pred cccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHH-cCCc-----EEccCChHHHHHHHHHHHH----cCCEEEEE
Confidence 4579999999999 78999999999999999999996 9996 22222 2267777766654 56789999
Q ss_pred cCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeec--ChhHHhhhc
Q 024375 213 EDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLL--QLSDFCTKL 267 (268)
Q Consensus 213 GDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~--~~~~~~~~~ 267 (268)
||+.+|+.++++ || +++.||+++. .... .+|+++. ++++|...+
T Consensus 473 GDg~nD~~al~~----A~---vgia~g~g~~--~a~~--~Advvl~~~~l~~l~~~i 518 (562)
T TIGR01511 473 GDGINDAPALAQ----AD---VGIAIGAGTD--VAIE--AADVVLMRNDLNDVATAI 518 (562)
T ss_pred eCCCccHHHHhh----CC---EEEEeCCcCH--HHHh--hCCEEEeCCCHHHHHHHH
Confidence 999999999998 66 5899998653 3222 3578885 777775543
No 103
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=99.00 E-value=2.9e-09 Score=90.01 Aligned_cols=116 Identities=25% Similarity=0.259 Sum_probs=86.8
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCC---------------chHHHHHHHHHhcCCCCCCceEe-cCC--------CCCc
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSN---------------QSRFVETLLRELAGVTITPDRLY-GLG--------TGPK 191 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK---------------~~~~~~~~L~~~~gl~~~f~~i~-g~~--------~~pk 191 (268)
.+.||+.+.|. +.|+++.||||. .......+|+. .|+ -|+.|+ +.. .||+
T Consensus 31 ~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~-~gv--~id~i~~Cph~p~~~c~cRKP~ 107 (181)
T COG0241 31 QFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILAS-QGV--KIDGILYCPHHPEDNCDCRKPK 107 (181)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHH-cCC--ccceEEECCCCCCCCCcccCCC
Confidence 67899999998 899999999994 34456667775 776 345444 431 3599
Q ss_pred HHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHh
Q 024375 192 VNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFC 264 (268)
Q Consensus 192 p~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~ 264 (268)
|-+++++++++++++++.+||||+..|+++|.+ +|+..+-+.-|.+....-.. .-..++.++.++.
T Consensus 108 ~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n----~gi~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 173 (181)
T COG0241 108 PGMLLSALKEYNIDLSRSYVVGDRLTDLQAAEN----AGIKGVLVLTGIGVTTDGAG---RAKWVFDSLAEFA 173 (181)
T ss_pred hHHHHHHHHHhCCCccceEEecCcHHHHHHHHH----CCCCceEEEcCccccccccc---ccccccccHHHHH
Confidence 999999999999999999999999999999999 67776666666654321111 2236666666665
No 104
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=98.96 E-value=1.6e-08 Score=91.02 Aligned_cols=115 Identities=14% Similarity=0.170 Sum_probs=86.0
Q ss_pred hhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHH
Q 024375 95 ENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLR 171 (268)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~ 171 (268)
..|-.....++..++++.+.+++.+.. ....+.||+.++|+ ++|++++|+|+.....++.+|+
T Consensus 91 ~eWw~k~~~l~~~~~~~~e~i~~~v~~--------------~~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~ 156 (277)
T TIGR01544 91 VEWWTKSHGLLVQQAFPKAKIKEIVAE--------------SDVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLR 156 (277)
T ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHhh--------------cCCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHH
Confidence 344445566667777777665544331 13688999999999 7999999999999999999999
Q ss_pred HhcCCCCCCceE------ecCC---C-CC--------cHH-HHHHHHhcCC--CCCCcEEEEcCcHhhHHHhhc
Q 024375 172 ELAGVTITPDRL------YGLG---T-GP--------KVN-VLKQLQKKPE--HQGLRLHFVEDRLATLKNVIK 224 (268)
Q Consensus 172 ~~~gl~~~f~~i------~g~~---~-~p--------kp~-~l~~~~~~l~--~~~~~~~~VGDs~~Di~aa~~ 224 (268)
+ +|+...+..| +..+ . +| |.+ +++.+.+.++ ..+++|++|||+.+|+.+|.-
T Consensus 157 ~-lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g 229 (277)
T TIGR01544 157 Q-AGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADG 229 (277)
T ss_pred H-cCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcC
Confidence 6 9997777777 4322 1 13 334 4445777787 789999999999999999774
No 105
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=98.96 E-value=4.2e-09 Score=91.54 Aligned_cols=92 Identities=18% Similarity=0.093 Sum_probs=64.4
Q ss_pred cEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC------CC-CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccC
Q 024375 154 RIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG------TG-PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEP 226 (268)
Q Consensus 154 ~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~------~~-pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~ 226 (268)
.+.+.++++.+.+...+++ ++.. +..+.+.. .+ +|+..+..+++.++++++++++|||+.+|+.+.+.
T Consensus 117 ~~~~~~~~~~~~~~~~l~~-~~~~--~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~-- 191 (230)
T PRK01158 117 EVALRRTVPVEEVRELLEE-LGLD--LEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAIGDSENDLEMFEV-- 191 (230)
T ss_pred eeeecccccHHHHHHHHHH-cCCc--EEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHh--
Confidence 4566778888888888885 7642 23333321 12 79999999999999999999999999999999998
Q ss_pred ccCCCcEEEEecCCCCHHHHHhcCCCCCeeecC
Q 024375 227 ELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ 259 (268)
Q Consensus 227 ~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~ 259 (268)
+|+. +++.- ..+++++. .+++..+
T Consensus 192 --ag~~-vam~N---a~~~vk~~---a~~v~~~ 215 (230)
T PRK01158 192 --AGFG-VAVAN---ADEELKEA---ADYVTEK 215 (230)
T ss_pred --cCce-EEecC---ccHHHHHh---cceEecC
Confidence 5554 34432 23455543 2466554
No 106
>PRK10671 copA copper exporting ATPase; Provisional
Probab=98.95 E-value=2.3e-09 Score=110.29 Aligned_cols=114 Identities=16% Similarity=0.185 Sum_probs=89.6
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEEEc
Q 024375 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVE 213 (268)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~VG 213 (268)
..+++||+.++|+ ++|++++++|++.+..++.++++ +|++.+|..+ ...+|.+.+. +++..+++++|||
T Consensus 648 ~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~-lgi~~~~~~~---~p~~K~~~i~----~l~~~~~~v~~vG 719 (834)
T PRK10671 648 RDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKE-AGIDEVIAGV---LPDGKAEAIK----RLQSQGRQVAMVG 719 (834)
T ss_pred cCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cCCCEEEeCC---CHHHHHHHHH----HHhhcCCEEEEEe
Confidence 4579999999998 78999999999999999999996 9997544322 1114555444 4455678899999
Q ss_pred CcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 214 DRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 214 Ds~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
|+.+|+.++++ ||+ +|.||.++....+. +++.....++++|...+
T Consensus 720 Dg~nD~~al~~----Agv---gia~g~g~~~a~~~--ad~vl~~~~~~~i~~~i 764 (834)
T PRK10671 720 DGINDAPALAQ----ADV---GIAMGGGSDVAIET--AAITLMRHSLMGVADAL 764 (834)
T ss_pred CCHHHHHHHHh----CCe---eEEecCCCHHHHHh--CCEEEecCCHHHHHHHH
Confidence 99999999998 665 89999887766654 46778888898887654
No 107
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=98.89 E-value=2.2e-08 Score=86.71 Aligned_cols=77 Identities=13% Similarity=0.111 Sum_probs=58.7
Q ss_pred CCCcEEE-EcCCchHHHHHHHHHhcCCC----CCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhcc
Q 024375 151 ASSRIYI-VTSNQSRFVETLLRELAGVT----ITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKE 225 (268)
Q Consensus 151 ~g~~l~I-vTnK~~~~~~~~L~~~~gl~----~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~ 225 (268)
.++.+.+ .|++....+.+.+++ .++. .+|..|.+.+. .|+..+..+++.+|++++++++|||+.||+.+-+.
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~ei~~~~~-~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~- 213 (221)
T TIGR02463 137 ASVPLLWRDSDSRMPRFTALLAD-LGLAIVQGNRFSHVLGASS-SKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEV- 213 (221)
T ss_pred CCccEEecCchhHHHHHHHHHHH-cCCeEEecCCeeEEecCCC-CHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHh-
Confidence 4555566 677878888888885 7775 44444444332 58888999999999999999999999999999998
Q ss_pred CccCCCcE
Q 024375 226 PELDGWNL 233 (268)
Q Consensus 226 ~~~agi~~ 233 (268)
||..+
T Consensus 214 ---ag~~v 218 (221)
T TIGR02463 214 ---ADYAV 218 (221)
T ss_pred ---CCceE
Confidence 56443
No 108
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=98.86 E-value=3.9e-09 Score=93.19 Aligned_cols=87 Identities=16% Similarity=0.332 Sum_probs=72.4
Q ss_pred cCCCCCccHHHHHH---hCCCcEEEEcCCchHHHH--HHHHHhcCCCC-CCceEecCCCCCcHHHHHHHHhcCCCCCCcE
Q 024375 136 GANRLYPGVSDALK---LASSRIYIVTSNQSRFVE--TLLRELAGVTI-TPDRLYGLGTGPKVNVLKQLQKKPEHQGLRL 209 (268)
Q Consensus 136 ~~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~--~~L~~~~gl~~-~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~ 209 (268)
....+|||+.|+|+ ++|++++|+||+++.... +.|++ +|+.. +|+.|++++... .+.+..++++++..++++
T Consensus 21 ~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~-~gl~~~~~~~Ii~s~~~~-~~~l~~~~~~~~~~~~~~ 98 (242)
T TIGR01459 21 DGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKS-LGINADLPEMIISSGEIA-VQMILESKKRFDIRNGII 98 (242)
T ss_pred cCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHH-CCCCccccceEEccHHHH-HHHHHhhhhhccCCCceE
Confidence 34679999999998 789999999999998776 78995 99998 999999876221 256777777888889999
Q ss_pred EEEcCcHhhHHHhhc
Q 024375 210 HFVEDRLATLKNVIK 224 (268)
Q Consensus 210 ~~VGDs~~Di~aa~~ 224 (268)
+||||+..|++....
T Consensus 99 ~~vGd~~~d~~~~~~ 113 (242)
T TIGR01459 99 YLLGHLENDIINLMQ 113 (242)
T ss_pred EEeCCcccchhhhcC
Confidence 999999999876644
No 109
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=98.78 E-value=2.9e-08 Score=85.86 Aligned_cols=69 Identities=14% Similarity=0.074 Sum_probs=52.2
Q ss_pred CcEEEEcCCchHHHHHHHHHhcCCCCCCceEecC---C---CC-CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhc
Q 024375 153 SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGL---G---TG-PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIK 224 (268)
Q Consensus 153 ~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~---~---~~-pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~ 224 (268)
....+.+....+.+..++++ ++... ..+.+. + .+ +|...+..+++.++++++++++|||+.+|+.+.+.
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ 183 (225)
T TIGR01482 108 SLVKMRYGIDVDTVREIIKE-LGLNL--VAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDSENDIDLFEV 183 (225)
T ss_pred ceEEEeecCCHHHHHHHHHh-cCceE--EEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCCHhhHHHHHh
Confidence 33556666677778888885 77531 111111 1 12 89999999999999999999999999999999998
No 110
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=98.78 E-value=4.2e-09 Score=87.81 Aligned_cols=92 Identities=8% Similarity=-0.047 Sum_probs=75.1
Q ss_pred CCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhcCCCC-CCceEecCCCC--CcHHHHHHHHhcCCCCCCcEEEEc
Q 024375 139 RLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTI-TPDRLYGLGTG--PKVNVLKQLQKKPEHQGLRLHFVE 213 (268)
Q Consensus 139 ~lypGv~e~L~--~~g~~l~IvTnK~~~~~~~~L~~~~gl~~-~f~~i~g~~~~--pkp~~l~~~~~~l~~~~~~~~~VG 213 (268)
..=||+.|+|+ .+.+.++|.|++++.+++.+|++ ++... +|+.+++.+.. .++. +.+.+..+|.+++++||||
T Consensus 42 ~~RPgl~eFL~~l~~~yei~I~Ts~~~~yA~~il~~-ldp~~~~f~~~l~r~~~~~~~~~-~~K~L~~l~~~~~~vIiVD 119 (162)
T TIGR02251 42 FKRPHVDEFLERVSKWYELVIFTASLEEYADPVLDI-LDRGGKVISRRLYRESCVFTNGK-YVKDLSLVGKDLSKVIIID 119 (162)
T ss_pred EECCCHHHHHHHHHhcCEEEEEcCCcHHHHHHHHHH-HCcCCCEEeEEEEccccEEeCCC-EEeEchhcCCChhhEEEEe
Confidence 45599999999 56699999999999999999995 99875 88988887642 2222 5566777899999999999
Q ss_pred CcHhhHHHhhccCccCCCcEEEE
Q 024375 214 DRLATLKNVIKEPELDGWNLYLV 236 (268)
Q Consensus 214 Ds~~Di~aa~~~~~~agi~~i~v 236 (268)
|++.|+.++.+ +||++..-
T Consensus 120 D~~~~~~~~~~----NgI~i~~f 138 (162)
T TIGR02251 120 NSPYSYSLQPD----NAIPIKSW 138 (162)
T ss_pred CChhhhccCcc----CEeecCCC
Confidence 99999999887 67765443
No 111
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=98.75 E-value=5.5e-08 Score=83.84 Aligned_cols=101 Identities=24% Similarity=0.345 Sum_probs=76.7
Q ss_pred CCCCccHHHHHH---hCCC-cEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC-----CC-----C-------------
Q 024375 138 NRLYPGVSDALK---LASS-RIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-----TG-----P------------- 190 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~-~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~-----~~-----p------------- 190 (268)
.+.-||+.++++ +.|. .+.|||-...-+++.+|++ +|+...|..|++.. .+ |
T Consensus 83 iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea-~~~~d~F~~IfTNPa~~da~G~L~v~pyH~~hsC~~CPsN 161 (256)
T KOG3120|consen 83 IPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEA-AGIHDLFSEIFTNPACVDASGRLLVRPYHTQHSCNLCPSN 161 (256)
T ss_pred CCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHH-ccHHHHHHHHhcCCcccCCCCcEEeecCCCCCccCcCchh
Confidence 477899999999 5664 8999999999999999995 99999999888642 11 1
Q ss_pred --cHHHHHHHHhcC---CCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCC
Q 024375 191 --KVNVLKQLQKKP---EHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNT 242 (268)
Q Consensus 191 --kp~~l~~~~~~l---~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~ 242 (268)
|-.++.++.... |+.-++.+||||+-+|+-.-.. ..+-+++-..-||--
T Consensus 162 mCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~---Lr~~D~ampRkgfpl 215 (256)
T KOG3120|consen 162 MCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLR---LRACDVAMPRKGFPL 215 (256)
T ss_pred hhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchh---cccCceecccCCCch
Confidence 223454443332 6677799999999999976665 356778888888853
No 112
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=98.67 E-value=8.7e-08 Score=99.30 Aligned_cols=119 Identities=13% Similarity=0.167 Sum_probs=87.3
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC-C-------------------CCcHHH
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-T-------------------GPKVNV 194 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~-~-------------------~pkp~~ 194 (268)
.+++||+.++|+ ++|+++.++|++....+..+.++ .|+..+++.++++. - +..|+-
T Consensus 527 Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~-~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~ 605 (884)
T TIGR01522 527 DPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARR-LGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEH 605 (884)
T ss_pred CcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHH
Confidence 478999999999 79999999999999999999996 99987766544321 0 134443
Q ss_pred HHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeec--ChhHHhhhc
Q 024375 195 LKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLL--QLSDFCTKL 267 (268)
Q Consensus 195 l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~--~~~~~~~~~ 267 (268)
=..+.+.++...+.+.||||+.||+.|.++ |+ ||+.||++..+ .... .+|+++. +++++...+
T Consensus 606 K~~iv~~lq~~g~~v~mvGDGvND~pAl~~----Ad---VGia~g~~g~~-va~~--aaDivl~dd~~~~i~~~i 670 (884)
T TIGR01522 606 KMKIVKALQKRGDVVAMTGDGVNDAPALKL----AD---IGVAMGQTGTD-VAKE--AADMILTDDDFATILSAI 670 (884)
T ss_pred HHHHHHHHHHCCCEEEEECCCcccHHHHHh----CC---eeEecCCCcCH-HHHH--hcCEEEcCCCHHHHHHHH
Confidence 344444444445789999999999999998 66 79999975333 3322 3679994 488776543
No 113
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=98.61 E-value=1.2e-07 Score=82.01 Aligned_cols=95 Identities=11% Similarity=0.036 Sum_probs=64.7
Q ss_pred CcEEEEcCCchHHHHHHHHHhcCCCCCCc---eEecCCCCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccC
Q 024375 153 SRIYIVTSNQSRFVETLLRELAGVTITPD---RLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELD 229 (268)
Q Consensus 153 ~~l~IvTnK~~~~~~~~L~~~~gl~~~f~---~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~a 229 (268)
..+.+++++....+...++. .++..++. .-+......|...+..+++.++++++++++|||+.+|+.+.+. +
T Consensus 108 ~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ml~~----a 182 (215)
T TIGR01487 108 SLVIMREGKDVDEVREIIKE-RGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDIDLFRV----V 182 (215)
T ss_pred EEEEecCCccHHHHHHHHHh-CCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHh----C
Confidence 44567788888888888985 77654311 1111111278899999999999999999999999999999998 5
Q ss_pred CCcEEEEecCCCCHHHHHhcCCCCCeeecC
Q 024375 230 GWNLYLVDWGYNTPKERAEAASMPRIQLLQ 259 (268)
Q Consensus 230 gi~~i~v~wGy~~~~el~~~~~~P~~~~~~ 259 (268)
|+. +++ |- ..+++++. -+++..+
T Consensus 183 g~~-vam--~n-a~~~~k~~---A~~v~~~ 205 (215)
T TIGR01487 183 GFK-VAV--AN-ADDQLKEI---ADYVTSN 205 (215)
T ss_pred CCe-EEc--CC-ccHHHHHh---CCEEcCC
Confidence 533 333 32 23455553 2466543
No 114
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=98.57 E-value=2.7e-07 Score=77.44 Aligned_cols=101 Identities=20% Similarity=0.265 Sum_probs=71.1
Q ss_pred cCCCCCccHHHHHH---hCCCcEEEEc-CCchHHHHHHHHHhcCCC----------CCCceEecCCCCCcHHHHHHHHhc
Q 024375 136 GANRLYPGVSDALK---LASSRIYIVT-SNQSRFVETLLRELAGVT----------ITPDRLYGLGTGPKVNVLKQLQKK 201 (268)
Q Consensus 136 ~~~~lypGv~e~L~---~~g~~l~IvT-nK~~~~~~~~L~~~~gl~----------~~f~~i~g~~~~pkp~~l~~~~~~ 201 (268)
...++||+|.++|+ ++|++++|+| +...+.|+++|+. +++. .+|+.+-=. .++|...+..+.++
T Consensus 42 ~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~-l~i~~~~~~~~~~~~~F~~~eI~-~gsK~~Hf~~i~~~ 119 (169)
T PF12689_consen 42 EEVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKL-LEIDDADGDGVPLIEYFDYLEIY-PGSKTTHFRRIHRK 119 (169)
T ss_dssp -EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHH-TT-C----------CCECEEEES-SS-HHHHHHHHHHH
T ss_pred CEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHh-cCCCccccccccchhhcchhhee-cCchHHHHHHHHHh
Confidence 44689999999999 7999999999 4556799999995 9999 777653211 23788999999999
Q ss_pred CCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCC
Q 024375 202 PEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNT 242 (268)
Q Consensus 202 l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~ 242 (268)
.|++.++++|+.|....++...+ -||.|+-|.-|-..
T Consensus 120 tgI~y~eMlFFDDe~~N~~~v~~----lGV~~v~v~~Glt~ 156 (169)
T PF12689_consen 120 TGIPYEEMLFFDDESRNIEVVSK----LGVTCVLVPDGLTW 156 (169)
T ss_dssp H---GGGEEEEES-HHHHHHHHT----TT-EEEE-SSS--H
T ss_pred cCCChhHEEEecCchhcceeeEe----cCcEEEEeCCCCCH
Confidence 99999999999999999999998 79999999998643
No 115
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.52 E-value=2.4e-06 Score=72.57 Aligned_cols=85 Identities=18% Similarity=0.369 Sum_probs=68.1
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCC--C------C---ceEecCC-------CCCcHHHH
Q 024375 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTI--T------P---DRLYGLG-------TGPKVNVL 195 (268)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~--~------f---~~i~g~~-------~~pkp~~l 195 (268)
..++=|||+|+.. ++|.+++++|.--+.++..+-.+ +||+. . | ....|.+ ++.|++.|
T Consensus 86 k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~-Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~~i 164 (227)
T KOG1615|consen 86 KPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQ-LGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKAEVI 164 (227)
T ss_pred CCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHH-hCCcHhhhhhheeeeccCCcccccccCCccccCCccHHHH
Confidence 3578899999998 89999999999999999999996 99975 1 1 1122212 23789999
Q ss_pred HHHHhcCCCCCCcEEEEcCcHhhHHHhhc
Q 024375 196 KQLQKKPEHQGLRLHFVEDRLATLKNVIK 224 (268)
Q Consensus 196 ~~~~~~l~~~~~~~~~VGDs~~Di~aa~~ 224 (268)
..+.+ +..-..++||||..+|++|...
T Consensus 165 ~~lrk--~~~~~~~~mvGDGatDlea~~p 191 (227)
T KOG1615|consen 165 ALLRK--NYNYKTIVMVGDGATDLEAMPP 191 (227)
T ss_pred HHHHh--CCChheeEEecCCccccccCCc
Confidence 98887 6777889999999999987664
No 116
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=98.52 E-value=1.7e-07 Score=79.89 Aligned_cols=105 Identities=17% Similarity=0.169 Sum_probs=66.4
Q ss_pred ccCCCCCccHHHHHH---hCCCcEEEEcCCch-------HHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCC
Q 024375 135 IGANRLYPGVSDALK---LASSRIYIVTSNQS-------RFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEH 204 (268)
Q Consensus 135 ~~~~~lypGv~e~L~---~~g~~l~IvTnK~~-------~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~ 204 (268)
....+|+||+.|+|+ +.|..+.++|+.+. ....+-|++|||-..+-..+++.+ |. .++.
T Consensus 69 f~~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i~~~~~~~~~~---K~--------~v~~ 137 (191)
T PF06941_consen 69 FSNLPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPFIPYDNLIFTGD---KT--------LVGG 137 (191)
T ss_dssp TTT--B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHHHHCCEEEESS---GG--------GC--
T ss_pred hcCCCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCCCchheEEEecC---CC--------eEec
Confidence 345689999999999 78877888876654 355667777666544445555544 21 1233
Q ss_pred CCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhh
Q 024375 205 QGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCT 265 (268)
Q Consensus 205 ~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~ 265 (268)
+ ++|.|++..+..+.+ +|+++|....-|+.... .-..+.++++++.
T Consensus 138 D----vlIDD~~~n~~~~~~----~g~~~iLfd~p~Nr~~~-------~~~Rv~~W~ei~~ 183 (191)
T PF06941_consen 138 D----VLIDDRPHNLEQFAN----AGIPVILFDQPYNRDES-------NFPRVNNWEEIED 183 (191)
T ss_dssp S----EEEESSSHHHSS-SS----ESSEEEEE--GGGTT---------TSEEE-STTSHHH
T ss_pred c----EEecCChHHHHhccC----CCceEEEEcCCCCCCCC-------CCccCCCHHHHHH
Confidence 3 999999999998877 89999999998876432 3467778777754
No 117
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=98.49 E-value=5.5e-07 Score=91.71 Aligned_cols=111 Identities=14% Similarity=0.170 Sum_probs=83.9
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEEEc
Q 024375 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVE 213 (268)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~VG 213 (268)
..+++||+.++|+ ++|++++++|+.....++.+.++ +|++.++. .....|++.+.++.+ +++++|||
T Consensus 566 ~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~-lgi~~~~~----~~p~~K~~~v~~l~~-----~~~v~mvG 635 (741)
T PRK11033 566 QDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGE-LGIDFRAG----LLPEDKVKAVTELNQ-----HAPLAMVG 635 (741)
T ss_pred ecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCeecC----CCHHHHHHHHHHHhc-----CCCEEEEE
Confidence 3589999999999 78999999999999999999996 99964332 111147777776542 35799999
Q ss_pred CcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhh
Q 024375 214 DRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTK 266 (268)
Q Consensus 214 Ds~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~ 266 (268)
|+.||+.+.++ |+ |++.||.++....+. ++......++.+|...
T Consensus 636 DgiNDapAl~~----A~---vgia~g~~~~~a~~~--adivl~~~~l~~l~~~ 679 (741)
T PRK11033 636 DGINDAPAMKA----AS---IGIAMGSGTDVALET--ADAALTHNRLRGLAQM 679 (741)
T ss_pred CCHHhHHHHHh----CC---eeEEecCCCHHHHHh--CCEEEecCCHHHHHHH
Confidence 99999999998 55 899999877655443 3444444667776543
No 118
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=98.47 E-value=1.9e-07 Score=82.31 Aligned_cols=85 Identities=14% Similarity=0.114 Sum_probs=60.6
Q ss_pred hCCCcEEEEcCCchHHHH-HHHHHhcCCCCCCceEe---cCC----CCCcHHHHHHHHhcCCCCCCcE-EEEcCcH-hhH
Q 024375 150 LASSRIYIVTSNQSRFVE-TLLRELAGVTITPDRLY---GLG----TGPKVNVLKQLQKKPEHQGLRL-HFVEDRL-ATL 219 (268)
Q Consensus 150 ~~g~~l~IvTnK~~~~~~-~~L~~~~gl~~~f~~i~---g~~----~~pkp~~l~~~~~~l~~~~~~~-~~VGDs~-~Di 219 (268)
++|-...|+||++.-... .... +.|...+|+.+. |.. .||+|+++..++++++..++++ +||||+. +||
T Consensus 142 ~~~~~~~i~tN~d~~~~~~~g~~-~~~~g~~~~~i~~~~g~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di 220 (236)
T TIGR01460 142 AEGDVPFIAANRDDLVRLGDGRF-RPGAGAIAAGIKELSGREPTVVGKPSPAIYRAALNLLQARPERRDVMVGDNLRTDI 220 (236)
T ss_pred hCCCCeEEEECCCCCCCCCCCcE-eecchHHHHHHHHHhCceeeeecCCCHHHHHHHHHHhCCCCccceEEECCCcHHHH
Confidence 455357888997742111 1111 134443433333 322 2599999999999999998887 9999998 899
Q ss_pred HHhhccCccCCCcEEEEecC
Q 024375 220 KNVIKEPELDGWNLYLVDWG 239 (268)
Q Consensus 220 ~aa~~~~~~agi~~i~v~wG 239 (268)
.+|++ +|+++++|.||
T Consensus 221 ~~A~~----~G~~~i~v~~G 236 (236)
T TIGR01460 221 LGAKN----AGFDTLLVLTG 236 (236)
T ss_pred HHHHH----CCCcEEEEecC
Confidence 99998 89999999998
No 119
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=98.46 E-value=2.3e-07 Score=85.56 Aligned_cols=74 Identities=18% Similarity=0.147 Sum_probs=59.2
Q ss_pred CCcHHHHHHHHhcC--------CC-----CCCcEEEEcCcH-hhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCC
Q 024375 189 GPKVNVLKQLQKKP--------EH-----QGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPR 254 (268)
Q Consensus 189 ~pkp~~l~~~~~~l--------~~-----~~~~~~~VGDs~-~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~ 254 (268)
||+|.++..+++.+ +. ++++++||||+. +||.+|++ +|+.++.|.+|-.+.++. .....|+
T Consensus 233 KP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~----~G~~silV~tG~~~~~~~-~~~~~p~ 307 (321)
T TIGR01456 233 KPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQN----YGWFSCLVKTGVYNGGDD-LKECKPT 307 (321)
T ss_pred CCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHh----CCceEEEecccccCCCCC-CCCCCCC
Confidence 58999999887776 33 457999999998 99999998 899999999994444332 2245699
Q ss_pred eeecChhHHhhhc
Q 024375 255 IQLLQLSDFCTKL 267 (268)
Q Consensus 255 ~~~~~~~~~~~~~ 267 (268)
+++.++.++.+.+
T Consensus 308 ~vv~~l~e~~~~i 320 (321)
T TIGR01456 308 LIVNDVFDAVTKI 320 (321)
T ss_pred EEECCHHHHHHHh
Confidence 9999999997765
No 120
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=98.42 E-value=2.3e-06 Score=77.08 Aligned_cols=123 Identities=21% Similarity=0.202 Sum_probs=85.8
Q ss_pred CCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHH--hcCCCCCCceEe---cCC----CCCcHHHHHHHHhcCCCCCC
Q 024375 139 RLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRE--LAGVTITPDRLY---GLG----TGPKVNVLKQLQKKPEHQGL 207 (268)
Q Consensus 139 ~lypGv~e~L~--~~g~~l~IvTnK~~~~~~~~L~~--~~gl~~~f~~i~---g~~----~~pkp~~l~~~~~~l~~~~~ 207 (268)
--|+-...++. ++---+.|+||...-+- .... .-|-..+...|. |.+ .||.+.++..++++.++.|+
T Consensus 165 fsy~KL~kA~~yLqnP~clflatn~D~~~p--~~~~~~ipG~G~~v~av~~~t~R~P~v~GKP~~~m~~~l~~~~~i~ps 242 (306)
T KOG2882|consen 165 FSYPKLMKALNYLQNPGCLFLATNRDATTP--PTPGVEIPGAGSFVAAVKFATGRQPIVLGKPSTFMFEYLLEKFNIDPS 242 (306)
T ss_pred cCHHHHHHHHHHhCCCCcEEEeccCccccC--CCCCeeccCCccHHHHHHHHhcCCCeecCCCCHHHHHHHHHHcCCCcc
Confidence 34666666666 44455788888765321 0000 000001111111 112 14899999999999999999
Q ss_pred cEEEEcCcH-hhHHHhhccCccCCCcEEEEecCCCCHHHHHhc----CCCCCeeecChhHHhhhc
Q 024375 208 RLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEA----ASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 208 ~~~~VGDs~-~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~----~~~P~~~~~~~~~~~~~~ 267 (268)
+|+|||||. +||.-|++ +|..++.|..|-.+.++.+.. ...|||.++++.++...+
T Consensus 243 Rt~mvGDRL~TDIlFG~~----~G~~TLLvltGv~~led~~~~~~~~~~~PDyy~~~l~d~~~~~ 303 (306)
T KOG2882|consen 243 RTCMVGDRLDTDILFGKN----CGFKTLLVLSGVTTLEDILEAQGDNKMVPDYYADSLGDLLPLL 303 (306)
T ss_pred eEEEEcccchhhhhHhhc----cCcceEEEecCcCcHHHHHhcccccCCCCchHHhhHHHHhhhc
Confidence 999999997 69999998 899999999999988877665 457999999999986543
No 121
>PRK10976 putative hydrolase; Provisional
Probab=98.42 E-value=1.8e-06 Score=76.86 Aligned_cols=52 Identities=13% Similarity=0.038 Sum_probs=41.5
Q ss_pred CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhc
Q 024375 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEA 249 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~ 249 (268)
.|...+..+++.+|+++++++.|||+.||+.+-+. ||. .+++ |-. .+++++.
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~----ag~-~vAm--~NA-~~~vK~~ 241 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSM----AGK-GCIM--GNA-HQRLKDL 241 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHH----cCC-Ceee--cCC-cHHHHHh
Confidence 79999999999999999999999999999999998 554 2444 433 3445543
No 122
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=98.31 E-value=8.1e-06 Score=68.78 Aligned_cols=82 Identities=16% Similarity=0.289 Sum_probs=60.3
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcC----C---CCCCce----------EecCC-C--C-CcHH
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAG----V---TITPDR----------LYGLG-T--G-PKVN 193 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~g----l---~~~f~~----------i~g~~-~--~-pkp~ 193 (268)
.++=||..|+.+ +++++..|+|+-...++..++++ .+ + +.++.- |++.+ + + -|+.
T Consensus 72 i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~-ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~dK~~ 150 (220)
T COG4359 72 IKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEG-IVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGHDKSS 150 (220)
T ss_pred cccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHh-hccccceeeeEEeecCceEcCCCceeeecCCccccCCCcch
Confidence 577899999999 89999999999999999999996 65 1 112211 11111 1 1 4666
Q ss_pred HHHHHHhcCCCCCCcEEEEcCcHhhHHHhhc
Q 024375 194 VLKQLQKKPEHQGLRLHFVEDRLATLKNVIK 224 (268)
Q Consensus 194 ~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~ 224 (268)
.+.++. -+++.++|.||+..|+.||+.
T Consensus 151 vI~~l~----e~~e~~fy~GDsvsDlsaakl 177 (220)
T COG4359 151 VIHELS----EPNESIFYCGDSVSDLSAAKL 177 (220)
T ss_pred hHHHhh----cCCceEEEecCCcccccHhhh
Confidence 666654 345669999999999999997
No 123
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=98.31 E-value=4.5e-06 Score=74.33 Aligned_cols=52 Identities=15% Similarity=0.040 Sum_probs=42.3
Q ss_pred CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhc
Q 024375 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEA 249 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~ 249 (268)
.|...+..+++.+|+++++++.|||+.||+.+-+. ||. +|.-|-+ .+++++.
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~----ag~---~vAm~NA-~~~vK~~ 247 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEY----AGV---GVAMGNA-IPSVKEV 247 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHh----CCc---eEEecCc-cHHHHHh
Confidence 89999999999999999999999999999999998 553 4445533 3455553
No 124
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=98.27 E-value=7e-06 Score=73.41 Aligned_cols=35 Identities=11% Similarity=-0.078 Sum_probs=34.0
Q ss_pred CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhc
Q 024375 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIK 224 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~ 224 (268)
.|...++.+++.+|+++++++.|||+.||+.+=+.
T Consensus 188 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ 222 (272)
T PRK15126 188 NKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGS 222 (272)
T ss_pred ChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHH
Confidence 79999999999999999999999999999999998
No 125
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=98.27 E-value=9.3e-06 Score=71.90 Aligned_cols=59 Identities=14% Similarity=0.095 Sum_probs=44.8
Q ss_pred CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecC
Q 024375 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ 259 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~ 259 (268)
.|...+..+++.++++++++++|||+.+|+.+.+. +|+. +++ | +..++++.. .++++.+
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~----~~~~-~a~--~-na~~~~k~~---a~~~~~~ 246 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEA----AGYG-VAM--G-NADEELKAL---ADYVTDS 246 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHh----CCce-eEe--c-CchHHHHHh---CCEEecC
Confidence 79999999999999999999999999999999998 6653 333 4 334455543 2455544
No 126
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=98.26 E-value=2.1e-06 Score=71.27 Aligned_cols=82 Identities=13% Similarity=0.108 Sum_probs=62.7
Q ss_pred cCCCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhcCCC-CCC-ceEecCCC--CCcHHHHHHHHhcCCCCCCcE
Q 024375 136 GANRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVT-ITP-DRLYGLGT--GPKVNVLKQLQKKPEHQGLRL 209 (268)
Q Consensus 136 ~~~~lypGv~e~L~--~~g~~l~IvTnK~~~~~~~~L~~~~gl~-~~f-~~i~g~~~--~pkp~~l~~~~~~l~~~~~~~ 209 (268)
..+.++||+.++|+ ++++.++|+|||++.++..+++. ++.. .+| +.|+|.+. ++...-+.. -++.+.+.+
T Consensus 55 ~~v~~rPgv~efL~~l~~~yel~I~T~~~~~yA~~vl~~-ldp~~~~F~~ri~~rd~~~~~~~KdL~~---i~~~d~~~v 130 (156)
T TIGR02250 55 YLTKLRPFLHEFLKEASKLYEMHVYTMGTRAYAQAIAKL-IDPDGKYFGDRIISRDESGSPHTKSLLR---LFPADESMV 130 (156)
T ss_pred EEEEECCCHHHHHHHHHhhcEEEEEeCCcHHHHHHHHHH-hCcCCCeeccEEEEeccCCCCccccHHH---HcCCCcccE
Confidence 44689999999999 67799999999999999999995 9988 488 78888653 222222222 246677889
Q ss_pred EEEcCcHhhHHH
Q 024375 210 HFVEDRLATLKN 221 (268)
Q Consensus 210 ~~VGDs~~Di~a 221 (268)
++|+|++.=...
T Consensus 131 vivDd~~~~~~~ 142 (156)
T TIGR02250 131 VIIDDREDVWPW 142 (156)
T ss_pred EEEeCCHHHhhc
Confidence 999999754443
No 127
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=98.23 E-value=5.5e-06 Score=72.58 Aligned_cols=40 Identities=10% Similarity=-0.051 Sum_probs=33.9
Q ss_pred CcHHHHHHHHhcCCC--CCCcEEEEcCcHhhHHHhhccCccCCCcE
Q 024375 190 PKVNVLKQLQKKPEH--QGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (268)
Q Consensus 190 pkp~~l~~~~~~l~~--~~~~~~~VGDs~~Di~aa~~~~~~agi~~ 233 (268)
.|+..+..+++.+++ +++++++|||+.+|+.+-+. +|+++
T Consensus 181 sK~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~----ag~~v 222 (225)
T TIGR02461 181 DKGKAIKRLLDLYKLRPGAIESVGLGDSENDFPMFEV----VDLAF 222 (225)
T ss_pred CHHHHHHHHHHHhccccCcccEEEEcCCHHHHHHHHh----CCCcE
Confidence 788888988888865 67789999999999999998 66554
No 128
>PLN02645 phosphoglycolate phosphatase
Probab=98.21 E-value=5.9e-06 Score=75.80 Aligned_cols=88 Identities=15% Similarity=0.242 Sum_probs=67.9
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHH---HHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEE
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVET---LLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHF 211 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~---~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~ 211 (268)
..+|||+.++|+ ++|++++++||++...... -|++ +|+...++.|+++. ..+...++..+....+.+|
T Consensus 43 ~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~-lGi~~~~~~I~ts~-----~~~~~~l~~~~~~~~~~V~ 116 (311)
T PLN02645 43 DKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFES-LGLNVTEEEIFSSS-----FAAAAYLKSINFPKDKKVY 116 (311)
T ss_pred CccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHH-CCCCCChhhEeehH-----HHHHHHHHhhccCCCCEEE
Confidence 478999999998 7999999999998444433 4464 89988888888754 3555666665555455799
Q ss_pred EcCcHhhHHHhhccCccCCCcEEE
Q 024375 212 VEDRLATLKNVIKEPELDGWNLYL 235 (268)
Q Consensus 212 VGDs~~Di~aa~~~~~~agi~~i~ 235 (268)
|+++..+.+.+++ +|+.+++
T Consensus 117 viG~~~~~~~l~~----~Gi~~~~ 136 (311)
T PLN02645 117 VIGEEGILEELEL----AGFQYLG 136 (311)
T ss_pred EEcCHHHHHHHHH----CCCEEec
Confidence 9999999999998 7887765
No 129
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=98.21 E-value=5.9e-06 Score=73.49 Aligned_cols=52 Identities=19% Similarity=0.082 Sum_probs=41.0
Q ss_pred CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhc
Q 024375 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEA 249 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~ 249 (268)
.|...+..+++.+|+++++++.|||+.||+.+=+. +| .+|.=|=.. ++++++
T Consensus 189 ~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~----ag---~gvam~Na~-~~~k~~ 240 (264)
T COG0561 189 SKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEV----AG---LGVAMGNAD-EELKEL 240 (264)
T ss_pred chHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHh----cC---eeeeccCCC-HHHHhh
Confidence 78899999999999999999999999999999887 44 444445443 445543
No 130
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=98.21 E-value=3.2e-06 Score=70.28 Aligned_cols=88 Identities=22% Similarity=0.255 Sum_probs=61.1
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCC---ch-----------HHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHH
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSN---QS-----------RFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQ 197 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK---~~-----------~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~ 197 (268)
-++|+|.+.|+ +.|++++|+||- .. ...+.+++. +++. +...+... .||+|-|+..
T Consensus 29 ~~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~-l~ip--~~~~~a~~~d~~RKP~~GM~~~ 105 (159)
T PF08645_consen 29 FFPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKE-LGIP--IQVYAAPHKDPCRKPNPGMWEF 105 (159)
T ss_dssp EC-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHH-CTS---EEEEECGCSSTTSTTSSHHHHH
T ss_pred hcchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHH-cCCc--eEEEecCCCCCCCCCchhHHHH
Confidence 35679999999 899999999985 22 345566775 7664 33333322 3599999999
Q ss_pred HHhcCCC----CCCcEEEEcCc-----------HhhHHHhhccCccCCCcE
Q 024375 198 LQKKPEH----QGLRLHFVEDR-----------LATLKNVIKEPELDGWNL 233 (268)
Q Consensus 198 ~~~~l~~----~~~~~~~VGDs-----------~~Di~aa~~~~~~agi~~ 233 (268)
+++.++. +.++++||||+ ..|..-|.| +||++
T Consensus 106 ~~~~~~~~~~id~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N----~gi~f 152 (159)
T PF08645_consen 106 ALKDYNDGVEIDLANSFYVGDAAGRSKKKKDFSDSDRKFALN----CGIKF 152 (159)
T ss_dssp HCCCTSTT--S-CCC-EEEESSCHCTB-S--S--HHHHHHHH----HT--E
T ss_pred HHHhccccccccccceEEEeccCCCCCcccccChhHHHHHHH----cCCcc
Confidence 9998864 88899999996 688999998 67765
No 131
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.20 E-value=1.1e-05 Score=72.30 Aligned_cols=65 Identities=6% Similarity=-0.193 Sum_probs=47.6
Q ss_pred CcHHHHHHHHhcCCC---CCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCC-H-HHHHhcCCCCCeeecChh
Q 024375 190 PKVNVLKQLQKKPEH---QGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNT-P-KERAEAASMPRIQLLQLS 261 (268)
Q Consensus 190 pkp~~l~~~~~~l~~---~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~-~-~el~~~~~~P~~~~~~~~ 261 (268)
.|...+..+++.+|+ ++++++.|||+.||+.+=+. +|. +|.=|-.. . +.++...+.++++...+.
T Consensus 187 sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~----ag~---gvAM~~~~~~~~~l~~~~~~~~~~~~~~~ 256 (271)
T PRK03669 187 GKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDV----MDY---AVVVKGLNREGVHLQDDDPARVYRTQREG 256 (271)
T ss_pred CHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHh----CCE---EEEecCCCCCCcccccccCCceEeccCCC
Confidence 899999999999999 99999999999999999998 553 33333222 2 235444556777766544
No 132
>PLN02887 hydrolase family protein
Probab=98.11 E-value=4.7e-05 Score=75.50 Aligned_cols=52 Identities=12% Similarity=-0.007 Sum_probs=42.5
Q ss_pred CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhc
Q 024375 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEA 249 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~ 249 (268)
.|...+..+++.+|+++++++.|||+.||+++-+. || ++|.-|-+.. ++++.
T Consensus 507 SKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~----AG---~gVAMgNA~e-eVK~~ 558 (580)
T PLN02887 507 SKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQL----AS---LGVALSNGAE-KTKAV 558 (580)
T ss_pred CHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHH----CC---CEEEeCCCCH-HHHHh
Confidence 89999999999999999999999999999999998 55 3455564444 45543
No 133
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=98.06 E-value=2.4e-05 Score=81.60 Aligned_cols=114 Identities=17% Similarity=0.211 Sum_probs=79.1
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCc-----e---------------------EecCCC
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPD-----R---------------------LYGLGT 188 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~-----~---------------------i~g~~~ 188 (268)
.+|+||+.++++ ++|+++.++|+.....+..+.++ .|+...-. . ++.++.
T Consensus 536 Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~-~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~ 614 (917)
T TIGR01116 536 DPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRR-IGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRV 614 (917)
T ss_pred CCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHH-cCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEec
Confidence 468999999999 89999999999999999999996 99854111 1 111111
Q ss_pred CCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecC--hhHHhh
Q 024375 189 GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ--LSDFCT 265 (268)
Q Consensus 189 ~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~--~~~~~~ 265 (268)
.|+-=.++.+.++...+.+.|+||+.||+.+-++ |+ ||+.+|.++. ..++ .+|+++.+ ++.+..
T Consensus 615 --~P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~----Ad---VGia~g~g~~-~ak~---aAD~vl~dd~f~~i~~ 680 (917)
T TIGR01116 615 --EPSHKSELVELLQEQGEIVAMTGDGVNDAPALKK----AD---IGIAMGSGTE-VAKE---ASDMVLADDNFATIVA 680 (917)
T ss_pred --CHHHHHHHHHHHHhcCCeEEEecCCcchHHHHHh----CC---eeEECCCCcH-HHHH---hcCeEEccCCHHHHHH
Confidence 1221123333333445678999999999999998 66 4888996543 2222 36799887 666644
No 134
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=98.03 E-value=3.1e-05 Score=68.70 Aligned_cols=36 Identities=11% Similarity=0.015 Sum_probs=33.7
Q ss_pred CcHHHHHHHHhcCCCC--CCcEEEEcCcHhhHHHhhcc
Q 024375 190 PKVNVLKQLQKKPEHQ--GLRLHFVEDRLATLKNVIKE 225 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~--~~~~~~VGDs~~Di~aa~~~ 225 (268)
.|...+..+++.++++ .+++++|||+.+|+.+.+.+
T Consensus 176 ~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~a 213 (256)
T TIGR01486 176 DKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVV 213 (256)
T ss_pred CHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHC
Confidence 7888999999999998 99999999999999999983
No 135
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=97.96 E-value=5.5e-05 Score=63.45 Aligned_cols=92 Identities=20% Similarity=0.241 Sum_probs=66.1
Q ss_pred CCCCccHHHHHH---hCCC--cEEEEcCC-------chHHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCC--
Q 024375 138 NRLYPGVSDALK---LASS--RIYIVTSN-------QSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPE-- 203 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~--~l~IvTnK-------~~~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~-- 203 (268)
..+.|.+.+.++ +.+. ++.||||. ....++.+-+. +|+. ++.-...|| ....++++.++
T Consensus 58 ~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~-lgIp----vl~h~~kKP--~~~~~i~~~~~~~ 130 (168)
T PF09419_consen 58 DEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKA-LGIP----VLRHRAKKP--GCFREILKYFKCQ 130 (168)
T ss_pred CcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHh-hCCc----EEEeCCCCC--ccHHHHHHHHhhc
Confidence 467788888887 4444 59999997 47778888785 8863 332223334 44444444443
Q ss_pred ---CCCCcEEEEcCcH-hhHHHhhccCccCCCcEEEEecCC
Q 024375 204 ---HQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGY 240 (268)
Q Consensus 204 ---~~~~~~~~VGDs~-~Di~aa~~~~~~agi~~i~v~wGy 240 (268)
..|++++||||+. +||.+|+. .|+-+|+|+-|-
T Consensus 131 ~~~~~p~eiavIGDrl~TDVl~gN~----~G~~tilv~~gv 167 (168)
T PF09419_consen 131 KVVTSPSEIAVIGDRLFTDVLMGNR----MGSYTILVTDGV 167 (168)
T ss_pred cCCCCchhEEEEcchHHHHHHHhhc----cCceEEEEecCc
Confidence 3599999999997 79999998 899999998774
No 136
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=97.95 E-value=9.9e-06 Score=66.59 Aligned_cols=79 Identities=23% Similarity=0.312 Sum_probs=66.0
Q ss_pred HHHHHhCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhc
Q 024375 145 SDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIK 224 (268)
Q Consensus 145 ~e~L~~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~ 224 (268)
..+|.+.|++++|+|.+....+++-.+. +|+..+|. |.. .|-..+.++++++++.++++.||||-.+|+-.=.+
T Consensus 44 ik~l~~~Gi~vAIITGr~s~ive~Ra~~-LGI~~~~q---G~~--dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~ 117 (170)
T COG1778 44 IKLLLKSGIKVAIITGRDSPIVEKRAKD-LGIKHLYQ---GIS--DKLAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEK 117 (170)
T ss_pred HHHHHHcCCeEEEEeCCCCHHHHHHHHH-cCCceeee---chH--hHHHHHHHHHHHhCCCHHHhhhhcCccccHHHHHH
Confidence 3555689999999999999999999996 99975433 432 47789999999999999999999999999988777
Q ss_pred cCccCCCcE
Q 024375 225 EPELDGWNL 233 (268)
Q Consensus 225 ~~~~agi~~ 233 (268)
.|.++
T Consensus 118 ----vGls~ 122 (170)
T COG1778 118 ----VGLSV 122 (170)
T ss_pred ----cCCcc
Confidence 45544
No 137
>PTZ00445 p36-lilke protein; Provisional
Probab=97.95 E-value=2.6e-05 Score=67.39 Aligned_cols=93 Identities=22% Similarity=0.285 Sum_probs=72.4
Q ss_pred CCccHHHHHH---hCCCcEEEEcCCch---------------HHHHHHHHHhcCCCCCCceEecCC--------------
Q 024375 140 LYPGVSDALK---LASSRIYIVTSNQS---------------RFVETLLRELAGVTITPDRLYGLG-------------- 187 (268)
Q Consensus 140 lypGv~e~L~---~~g~~l~IvTnK~~---------------~~~~~~L~~~~gl~~~f~~i~g~~-------------- 187 (268)
+=|....+++ +.|++++|||=.++ +.++..|+. -+-+.-.+.+++.-
T Consensus 76 ~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~-s~~~~~i~~~~~yyp~~w~~p~~y~~~g 154 (219)
T PTZ00445 76 VTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAALKK-SKCDFKIKKVYAYYPKFWQEPSDYRPLG 154 (219)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechHHHHHHHHHh-cCccceeeeeeeeCCcccCChhhhhhhc
Confidence 4466666666 79999999996554 368888884 55554445555421
Q ss_pred -CCCcHHH--H--HHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEe
Q 024375 188 -TGPKVNV--L--KQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVD 237 (268)
Q Consensus 188 -~~pkp~~--l--~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~ 237 (268)
.||.|++ . ++++++.|+.|++++||.|+...+++|++ .|+.++-+.
T Consensus 155 l~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~NVeaA~~----lGi~ai~f~ 205 (219)
T PTZ00445 155 LDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNCKNALK----EGYIALHVT 205 (219)
T ss_pred ccCCCccchHHHHHHHHHHcCCCHHHeEeecCCHHHHHHHHH----CCCEEEEcC
Confidence 1378888 7 99999999999999999999999999999 788888876
No 138
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=97.93 E-value=0.00016 Score=60.01 Aligned_cols=87 Identities=16% Similarity=0.204 Sum_probs=54.8
Q ss_pred CccHHHHHH---hCCCcEEEEcCCchHHHH---HHHHHhc---CCCCCCceEecCC---C--------C--C---cHHHH
Q 024375 141 YPGVSDALK---LASSRIYIVTSNQSRFVE---TLLRELA---GVTITPDRLYGLG---T--------G--P---KVNVL 195 (268)
Q Consensus 141 ypGv~e~L~---~~g~~l~IvTnK~~~~~~---~~L~~~~---gl~~~f~~i~g~~---~--------~--p---kp~~l 195 (268)
.||+.++++ ++|+++.++|+.+...+. ..|+. + |.......+++.. . . | |.+.+
T Consensus 29 ~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~-~~~~~~~lp~g~li~~~g~~~~~~~~e~i~~~~~~~K~~~l 107 (157)
T smart00775 29 HPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQ-IKQDGHNLPHGPVLLSPDRLFAALHREVISKKPEVFKIACL 107 (157)
T ss_pred CHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHH-hhhccccCCCceEEEcCCcchhhhhcccccCCHHHHHHHHH
Confidence 478888887 689999999999988774 66663 2 2222223444322 0 1 2 45566
Q ss_pred HHHHhcCCCCCCcEE-EEcCcHhhHHHhhccCccCCCc
Q 024375 196 KQLQKKPEHQGLRLH-FVEDRLATLKNVIKEPELDGWN 232 (268)
Q Consensus 196 ~~~~~~l~~~~~~~~-~VGDs~~Di~aa~~~~~~agi~ 232 (268)
..+++.+.-.....+ -+|++.+|+++=++ +||+
T Consensus 108 ~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~----~gi~ 141 (157)
T smart00775 108 RDIKSLFPPQGNPFYAGFGNRITDVISYSA----VGIP 141 (157)
T ss_pred HHHHHhcCCCCCCEEEEeCCCchhHHHHHH----cCCC
Confidence 666654332222333 38899999999998 6665
No 139
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=97.84 E-value=0.0002 Score=60.46 Aligned_cols=104 Identities=17% Similarity=0.196 Sum_probs=74.4
Q ss_pred hhhccccccccCCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhc---CCC----CCCceEecCCCCCcHHHH
Q 024375 126 WMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELA---GVT----ITPDRLYGLGTGPKVNVL 195 (268)
Q Consensus 126 ~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~---gl~----~~f~~i~g~~~~pkp~~l 195 (268)
|..-|+.+-+ ..++||.+.+.|+ +.|++++|-|+-+-..-+-+.. |- .|. .|||.-+|. |......
T Consensus 91 Wa~Gy~sgel-kahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fg-hs~agdL~~lfsGyfDttiG~--KrE~~SY 166 (229)
T COG4229 91 WAHGYESGEL-KAHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFG-HSDAGDLNSLFSGYFDTTIGK--KRESQSY 166 (229)
T ss_pred HHhccccCcc-ccccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhc-ccccccHHhhhcceeeccccc--cccchhH
Confidence 4444544433 4689999999999 7999999999877654433333 21 223 344543332 2334567
Q ss_pred HHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEe
Q 024375 196 KQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVD 237 (268)
Q Consensus 196 ~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~ 237 (268)
.++....|++|.+++|+-|.+.-+.||+. +|+.++.+.
T Consensus 167 ~kIa~~iGl~p~eilFLSDn~~EL~AA~~----vGl~t~l~~ 204 (229)
T COG4229 167 AKIAGDIGLPPAEILFLSDNPEELKAAAG----VGLATGLAV 204 (229)
T ss_pred HHHHHhcCCCchheEEecCCHHHHHHHHh----cchheeeee
Confidence 88888899999999999999999999998 788887764
No 140
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=97.74 E-value=4.7e-05 Score=69.05 Aligned_cols=45 Identities=16% Similarity=0.172 Sum_probs=42.5
Q ss_pred ccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC
Q 024375 142 PGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG 187 (268)
Q Consensus 142 pGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~ 187 (268)
||+.|+|+ ++|++++|+||++++.+...|++ +|+..||+.|++++
T Consensus 149 PgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~-lGLd~YFdvIIs~G 196 (301)
T TIGR01684 149 PRIYDSLTELKKRGCILVLWSYGDRDHVVESMRK-VKLDRYFDIIISGG 196 (301)
T ss_pred HHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHH-cCCCcccCEEEECC
Confidence 99999999 78999999999999999999996 99999999999865
No 141
>COG4996 Predicted phosphatase [General function prediction only]
Probab=97.71 E-value=7.2e-05 Score=59.84 Aligned_cols=87 Identities=17% Similarity=0.146 Sum_probs=70.5
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcC------CCCCC
Q 024375 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKP------EHQGL 207 (268)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l------~~~~~ 207 (268)
.+++||.|.++|. ..|+-++.+|=+...-+.+.|+. +++..||+.++-....-|-.|+.++++.+ .++|.
T Consensus 39 ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLra-l~~~~yFhy~ViePhP~K~~ML~~llr~i~~er~~~ikP~ 117 (164)
T COG4996 39 EVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRA-LDLLQYFHYIVIEPHPYKFLMLSQLLREINTERNQKIKPS 117 (164)
T ss_pred EEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHH-hchhhhEEEEEecCCChhHHHHHHHHHHHHHhhccccCcc
Confidence 4689999999999 78999999998889999999996 99999999888644334556777776644 47899
Q ss_pred cEEEEcCcHhhHHHhhc
Q 024375 208 RLHFVEDRLATLKNVIK 224 (268)
Q Consensus 208 ~~~~VGDs~~Di~aa~~ 224 (268)
+++|+.|+..-+..-..
T Consensus 118 ~Ivy~DDR~iH~~~Iwe 134 (164)
T COG4996 118 EIVYLDDRRIHFGNIWE 134 (164)
T ss_pred eEEEEecccccHHHHHH
Confidence 99999999776654443
No 142
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=97.69 E-value=0.00017 Score=63.38 Aligned_cols=81 Identities=17% Similarity=0.096 Sum_probs=56.6
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHH---HHHHHHHhcCCCCCCceEecC--CCCC------cHHHHHHHHhc-
Q 024375 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRF---VETLLRELAGVTITPDRLYGL--GTGP------KVNVLKQLQKK- 201 (268)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~l~IvTnK~~~~---~~~~L~~~~gl~~~f~~i~g~--~~~p------kp~~l~~~~~~- 201 (268)
..++.||+.++++ ++|+++.++|+.+... +.+-|.+ .|+..+ +.++-. +... |.+...++.++
T Consensus 118 ~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~-~G~~~~-~~LiLR~~~d~~~~~~~yKs~~R~~l~~~G 195 (229)
T TIGR01675 118 AAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLIN-AGFTGW-KHLILRGLEDSNKTVVTYKSEVRKSLMEEG 195 (229)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHH-cCCCCc-CeeeecCCCCCCchHhHHHHHHHHHHHhCC
Confidence 3578999999999 7999999999999776 7788886 898765 555532 2222 44444444332
Q ss_pred CCCCCCcEEEEcCcHhhHHHhh
Q 024375 202 PEHQGLRLHFVEDRLATLKNVI 223 (268)
Q Consensus 202 l~~~~~~~~~VGDs~~Di~aa~ 223 (268)
+.+ +..|||..+|+.++.
T Consensus 196 YrI----v~~iGDq~sDl~G~~ 213 (229)
T TIGR01675 196 YRI----WGNIGDQWSDLLGSP 213 (229)
T ss_pred ceE----EEEECCChHHhcCCC
Confidence 222 368999999996543
No 143
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=97.68 E-value=0.0004 Score=55.60 Aligned_cols=115 Identities=12% Similarity=0.272 Sum_probs=79.2
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEe-cCCCCCcHHHHHHHHhcCCCCCCcEEEE
Q 024375 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLY-GLGTGPKVNVLKQLQKKPEHQGLRLHFV 212 (268)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~-g~~~~pkp~~l~~~~~~l~~~~~~~~~V 212 (268)
.-.+|+.|.++++ +. ++++|+|.-...+..++++ ..|+. .+.+. |++ |+.=.++++.|+-+-+.++||
T Consensus 28 gGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae-~~gi~--~~rv~a~a~----~e~K~~ii~eLkk~~~k~vmV 99 (152)
T COG4087 28 GGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAE-FVGIP--VERVFAGAD----PEMKAKIIRELKKRYEKVVMV 99 (152)
T ss_pred CcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHH-HcCCc--eeeeecccC----HHHHHHHHHHhcCCCcEEEEe
Confidence 3579999999999 56 9999999999999999999 48975 34554 333 343344444455455789999
Q ss_pred cCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 213 EDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 213 GDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
||..||+.+-++ |.+-.+-+.-+ +-++.+.. .-|+++..+.++-..+
T Consensus 100 GnGaND~laLr~----ADlGI~tiq~e-~v~~r~l~---~ADvvik~i~e~ldl~ 146 (152)
T COG4087 100 GNGANDILALRE----ADLGICTIQQE-GVPERLLL---TADVVLKEIAEILDLL 146 (152)
T ss_pred cCCcchHHHhhh----cccceEEeccC-CcchHHHh---hchhhhhhHHHHHHHh
Confidence 999999999998 44444444333 22222222 2368888777775554
No 144
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=97.63 E-value=4.8e-05 Score=66.95 Aligned_cols=80 Identities=16% Similarity=0.200 Sum_probs=55.9
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchH---HHHHHHHHhcCCCCCCceEe-cCCC-C------CcHHHHHHHHhc-CC
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSNQSR---FVETLLRELAGVTITPDRLY-GLGT-G------PKVNVLKQLQKK-PE 203 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK~~~---~~~~~L~~~~gl~~~f~~i~-g~~~-~------pkp~~l~~~~~~-l~ 203 (268)
++.||+.++++ ++|+++.++||.++. .+.+-|++ .|....-..+. +... . -|.+....+.++ +.
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~-~G~~~~~~l~lr~~~~~~~~~~~~yK~~~r~~i~~~Gy~ 193 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKK-AGFPGWDHLILRPDKDPSKKSAVEYKSERRKEIEKKGYR 193 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHH-HTTSTBSCGEEEEESSTSS------SHHHHHHHHHTTEE
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHH-cCCCccchhccccccccccccccccchHHHHHHHHcCCc
Confidence 67899999999 899999999986654 66777886 89765433343 2221 1 255555555555 34
Q ss_pred CCCCcEEEEcCcHhhHHHhh
Q 024375 204 HQGLRLHFVEDRLATLKNVI 223 (268)
Q Consensus 204 ~~~~~~~~VGDs~~Di~aa~ 223 (268)
+ +++|||...|+..++
T Consensus 194 I----i~~iGD~~~D~~~~~ 209 (229)
T PF03767_consen 194 I----IANIGDQLSDFSGAK 209 (229)
T ss_dssp E----EEEEESSGGGCHCTH
T ss_pred E----EEEeCCCHHHhhccc
Confidence 4 589999999998844
No 145
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=97.57 E-value=0.0027 Score=62.07 Aligned_cols=101 Identities=15% Similarity=0.148 Sum_probs=65.7
Q ss_pred CCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHHhCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC-
Q 024375 109 SENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG- 187 (268)
Q Consensus 109 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~- 187 (268)
|++.+++++...++...|.. ..++|.+.+.++++|.. +|||..++..++.+++.++|++ .|+|.+
T Consensus 89 G~~~~el~~~~r~~l~~f~~---------~~l~~~a~~~~~~~g~~-vvVSASp~~~Vepfa~~~LGid----~VIgTeL 154 (497)
T PLN02177 89 GLKIRDIELVSRSVLPKFYA---------EDVHPETWRVFNSFGKR-YIITASPRIMVEPFVKTFLGAD----KVLGTEL 154 (497)
T ss_pred CCCHHHHHHHHHHHHHHHHH---------HhcCHHHHHHHHhCCCE-EEEECCcHHHHHHHHHHcCCCC----EEEeccc
Confidence 77777776666555555432 13788888888877754 9999999999999997436864 444432
Q ss_pred ------------CCCc----HHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhc
Q 024375 188 ------------TGPK----VNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIK 224 (268)
Q Consensus 188 ------------~~pk----p~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~ 224 (268)
.+++ .+-+..+.+.++.+... +..|||.+|...-.-
T Consensus 155 ev~~~G~~TG~i~g~~~c~Ge~Kv~rl~~~~g~~~~~-~aYgDS~sD~plL~~ 206 (497)
T PLN02177 155 EVSKSGRATGFMKKPGVLVGDHKRDAVLKEFGDALPD-LGLGDRETDHDFMSI 206 (497)
T ss_pred EECcCCEEeeeecCCCCCccHHHHHHHHHHhCCCCce-EEEECCccHHHHHHh
Confidence 0121 12233333444533333 899999999987665
No 146
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=97.54 E-value=0.00013 Score=66.17 Aligned_cols=46 Identities=20% Similarity=0.105 Sum_probs=42.6
Q ss_pred CccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC
Q 024375 141 YPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG 187 (268)
Q Consensus 141 ypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~ 187 (268)
=|||.++|+ ++|++++|+||++++.+..+|++ +|+..+|+.|+|++
T Consensus 150 dp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~-lgL~~yFDvII~~g 198 (303)
T PHA03398 150 DPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKE-TKLEGYFDIIICGG 198 (303)
T ss_pred ChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHH-cCCCccccEEEECC
Confidence 399999999 79999999999999999999996 99999999998865
No 147
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=97.50 E-value=0.00016 Score=63.89 Aligned_cols=70 Identities=13% Similarity=0.126 Sum_probs=55.3
Q ss_pred CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccC---ccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhh
Q 024375 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEP---ELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTK 266 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~---~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~ 266 (268)
.|...+..++++++..+.+++||||+.+|+.+.+.+. ..-|..++.|.+|-. ....++.+.+++++...
T Consensus 167 ~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~~--------~~~A~~~~~~~~~v~~~ 238 (244)
T TIGR00685 167 NKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGSK--------KTVAKFHLTGPQQVLEF 238 (244)
T ss_pred CHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCCc--------CCCceEeCCCHHHHHHH
Confidence 5779999999999999999999999999999999730 011667788876621 23467999999998776
Q ss_pred c
Q 024375 267 L 267 (268)
Q Consensus 267 ~ 267 (268)
|
T Consensus 239 L 239 (244)
T TIGR00685 239 L 239 (244)
T ss_pred H
Confidence 5
No 148
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=97.50 E-value=8.4e-05 Score=63.97 Aligned_cols=71 Identities=14% Similarity=0.127 Sum_probs=58.7
Q ss_pred CCcHHHHHHHHhcCCCCCCcEEEEcCcHh-hHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHH
Q 024375 189 GPKVNVLKQLQKKPEHQGLRLHFVEDRLA-TLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDF 263 (268)
Q Consensus 189 ~pkp~~l~~~~~~l~~~~~~~~~VGDs~~-Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~ 263 (268)
||.|..++.+++.+|++|++++||||-.+ |+-+|++ .||+-|.|..|=..+.+.....+.|+..+++..+-
T Consensus 181 KP~~~fFe~al~~~gv~p~~aVMIGDD~~dDvgGAq~----~GMrgilVkTGK~rpsDe~k~~~~p~~~~d~f~~A 252 (262)
T KOG3040|consen 181 KPSPFFFESALQALGVDPEEAVMIGDDLNDDVGGAQA----CGMRGILVKTGKFRPSDEEKPPVPPDLTADNFADA 252 (262)
T ss_pred CCCHHHHHHHHHhcCCChHHheEEccccccchhhHhh----hcceeEEeeccccCCcccccCCCCcchhhhhHHHH
Confidence 48999999999999999999999999875 6777887 89999999999766644555677888888776653
No 149
>PLN02423 phosphomannomutase
Probab=97.31 E-value=0.0011 Score=58.84 Aligned_cols=39 Identities=18% Similarity=0.009 Sum_probs=34.0
Q ss_pred CcHHHHHHHHhcCCCCCCcEEEEcC----cHhhHHHhhccCccCCCcEEEEe
Q 024375 190 PKVNVLKQLQKKPEHQGLRLHFVED----RLATLKNVIKEPELDGWNLYLVD 237 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~~~~~~~VGD----s~~Di~aa~~~~~~agi~~i~v~ 237 (268)
.|...+..++ ++++++.+|| +.||+++-+. -|+.++.|+
T Consensus 189 nKg~al~~L~-----~~~e~~aFGD~~~~~~ND~eMl~~----~~~~~~~~~ 231 (245)
T PLN02423 189 DKTYCLQFLE-----DFDEIHFFGDKTYEGGNDHEIFES----ERTIGHTVT 231 (245)
T ss_pred CHHHHHHHhc-----CcCeEEEEeccCCCCCCcHHHHhC----CCcceEEeC
Confidence 7888888877 8899999999 7999999995 589999984
No 150
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=97.30 E-value=0.0021 Score=64.59 Aligned_cols=41 Identities=12% Similarity=-0.044 Sum_probs=35.3
Q ss_pred CcHHHHHHHHhcCCCCCCcEEEE--cCcHhhHHHhhccCccCCCcEE
Q 024375 190 PKVNVLKQLQKKPEHQGLRLHFV--EDRLATLKNVIKEPELDGWNLY 234 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~~~~~~~V--GDs~~Di~aa~~~~~~agi~~i 234 (268)
.|-..+..+++.+++..++++.| ||+.||+.+=+. ||..++
T Consensus 613 dKG~AL~~L~e~~gI~~~eViafalGDs~NDisMLe~----Ag~gVA 655 (694)
T PRK14502 613 DKGKAIKILNELFRLNFGNIHTFGLGDSENDYSMLET----VDSPIL 655 (694)
T ss_pred CHHHHHHHHHHHhCCCccceEEEEcCCcHhhHHHHHh----CCceEE
Confidence 78999999999999988888888 999999999987 665443
No 151
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=97.21 E-value=0.003 Score=56.14 Aligned_cols=48 Identities=19% Similarity=0.129 Sum_probs=36.1
Q ss_pred CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHH
Q 024375 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPK 244 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~ 244 (268)
.|-..+..+++++++++++++.+|||.||+.+=. .+.+.|.| |-..++
T Consensus 165 ~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~-----~~~~~vvV--~Na~~e 212 (247)
T PF05116_consen 165 SKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLE-----GGDHGVVV--GNAQPE 212 (247)
T ss_dssp SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHC-----CSSEEEE---TTS-HH
T ss_pred CHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHc-----CcCCEEEE--cCCCHH
Confidence 6889999999999999999999999999998875 45555555 544444
No 152
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=97.14 E-value=0.0023 Score=56.51 Aligned_cols=89 Identities=16% Similarity=0.194 Sum_probs=60.3
Q ss_pred hCCCcEEEEcCCch-----HHHHHHHHHhcCCCCCCceEecCC-------CC-CcHHHHHHHHhcCCCCCCcEEEEcCcH
Q 024375 150 LASSRIYIVTSNQS-----RFVETLLRELAGVTITPDRLYGLG-------TG-PKVNVLKQLQKKPEHQGLRLHFVEDRL 216 (268)
Q Consensus 150 ~~g~~l~IvTnK~~-----~~~~~~L~~~~gl~~~f~~i~g~~-------~~-pkp~~l~~~~~~l~~~~~~~~~VGDs~ 216 (268)
+.-+++.+.+.+.. ......+.+ +|+. +..++++. .+ +|...+..+++.++++++++++|||+.
T Consensus 117 ~~~~k~~~~~~~~~~~~~~~~l~~~l~~-~~~~--~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~~i~~~~~i~~GD~~ 193 (249)
T TIGR01485 117 QRPHKVSFFLDPEAAPEVIKQLTEMLKE-TGLD--VKLIYSSGKDLDILPQGSGKGQALQYLLQKLAMEPSQTLVCGDSG 193 (249)
T ss_pred cCCeeEEEEechhhhhHHHHHHHHHHHh-cCCC--EEEEEECCceEEEEeCCCChHHHHHHHHHHcCCCccCEEEEECCh
Confidence 34566677665432 223444553 5543 23444331 12 899999999999999999999999999
Q ss_pred hhHHHhhccCccCCCcEEEEecCCCCHHHHHh
Q 024375 217 ATLKNVIKEPELDGWNLYLVDWGYNTPKERAE 248 (268)
Q Consensus 217 ~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~ 248 (268)
||+.+.+. ++..+++|. +..+++++
T Consensus 194 ND~~ml~~----~~~~~va~~---na~~~~k~ 218 (249)
T TIGR01485 194 NDIELFEI----GSVRGVIVS---NAQEELLQ 218 (249)
T ss_pred hHHHHHHc----cCCcEEEEC---CCHHHHHH
Confidence 99999996 566678884 33445554
No 153
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=97.10 E-value=0.0007 Score=59.24 Aligned_cols=98 Identities=11% Similarity=-0.042 Sum_probs=63.5
Q ss_pred CCCcEEEEcCCc----hHHHHHHHHHhcCCCCCCceEecC----C---C-CCcHHHHHHHHhcCCCCCCcEEEEcCcHhh
Q 024375 151 ASSRIYIVTSNQ----SRFVETLLRELAGVTITPDRLYGL----G---T-GPKVNVLKQLQKKPEHQGLRLHFVEDRLAT 218 (268)
Q Consensus 151 ~g~~l~IvTnK~----~~~~~~~L~~~~gl~~~f~~i~g~----~---~-~pkp~~l~~~~~~l~~~~~~~~~VGDs~~D 218 (268)
..+++.+.+... ...+...+++ ++.. +..+++. + . .+|+..+..++++++++++++++|||+.+|
T Consensus 111 ~~~~i~~~~~~~~~~~~~~~~~~l~~-~~~~--~~~~~~~~~~~ei~~~~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD 187 (236)
T TIGR02471 111 GPFKISYLLDPEGEPILPQIRQRLRQ-QSQA--AKVILSCGWFLDVLPLRASKGLALRYLSYRWGLPLEQILVAGDSGND 187 (236)
T ss_pred CCeeEEEEECcccchHHHHHHHHHHh-ccCC--EEEEEECCceEEEeeCCCChHHHHHHHHHHhCCCHHHEEEEcCCccH
Confidence 346666665432 1234445553 5532 2344443 2 1 289999999999999999999999999999
Q ss_pred HHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCC-eeecC
Q 024375 219 LKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPR-IQLLQ 259 (268)
Q Consensus 219 i~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~-~~~~~ 259 (268)
+.+.+. +| +++.+|-.. +++++....|. ++..+
T Consensus 188 ~~ml~~----~~---~~iav~na~-~~~k~~a~~~~~~v~~~ 221 (236)
T TIGR02471 188 EEMLRG----LT---LGVVVGNHD-PELEGLRHQQRIYFANN 221 (236)
T ss_pred HHHHcC----CC---cEEEEcCCc-HHHHHhhcCCcEEEcCC
Confidence 999997 44 344456443 45666555565 45544
No 154
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.10 E-value=0.0039 Score=56.77 Aligned_cols=120 Identities=8% Similarity=-0.022 Sum_probs=66.6
Q ss_pred hhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHH---------HH-hCCCcE-EEEcCCchHHHHHHHHHhcC
Q 024375 107 EWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDA---------LK-LASSRI-YIVTSNQSRFVETLLRELAG 175 (268)
Q Consensus 107 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~---------L~-~~g~~l-~IvTnK~~~~~~~~L~~~~g 175 (268)
..|.+...+...+...++.+...+. .+.+.+ . ..|.++ +. ++-+.- .+-+...... ++.+++ .|
T Consensus 95 ~lg~~y~~ir~~L~~l~~~~~~~f~-gF~d~t-~-~ei~~~TGL~~~~A~~A~~Re~SEp~~w~~~~~~~-~~~~~~-~g 169 (302)
T PRK12702 95 ALGLPYPCLRHILQQVRQDSHLDLI-GFGDWT-A-SELAAATGIPLEEAERAQKREYSEIFSYSGDPARL-REAFAQ-QE 169 (302)
T ss_pred ecCCCHHHHHHHHHHHHHHhCCCce-ehhhCC-H-HHHHHHhCcCHHHHHHHHhccCCcceEecCCHHHH-HHHHHH-cC
Confidence 3466677777777777777532221 111110 0 111111 11 233333 3335555555 777775 77
Q ss_pred CC----CCCceEec------------------CCC-C-CcHHHHHHHHhcCCC--CCCcEEEEcCcHhhHHHhhccCccC
Q 024375 176 VT----ITPDRLYG------------------LGT-G-PKVNVLKQLQKKPEH--QGLRLHFVEDRLATLKNVIKEPELD 229 (268)
Q Consensus 176 l~----~~f~~i~g------------------~~~-~-pkp~~l~~~~~~l~~--~~~~~~~VGDs~~Di~aa~~~~~~a 229 (268)
+. ..|-.+.| .+. . +|-..+..+.+.+.- .+-.++-+|||+||+.+=.. +
T Consensus 170 ~~~~~GgRf~H~l~~~~~~~~~~~~~~~~~~~~~~~~~dKg~A~~~L~~~y~~~~~~~~tiaLGDspND~~mLe~----~ 245 (302)
T PRK12702 170 ANLTQHLLRLHQLHFSDLPQWYLTGWMQPTLAAEPNSLPGEQAVQLLLDCYQRHLGPIKALGIGCSPPDLAFLRW----S 245 (302)
T ss_pred CeEEecCceEEecccccccccccccccccccccccCCCCHHHHHHHHHHHHHhccCCceEEEecCChhhHHHHHh----C
Confidence 75 24556666 221 2 667766666665543 34479999999999999886 5
Q ss_pred CCcEEE
Q 024375 230 GWNLYL 235 (268)
Q Consensus 230 gi~~i~ 235 (268)
-+++|-
T Consensus 246 D~~vvi 251 (302)
T PRK12702 246 EQKVVL 251 (302)
T ss_pred CeeEEe
Confidence 555544
No 155
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=97.09 E-value=0.0027 Score=64.42 Aligned_cols=109 Identities=18% Similarity=0.288 Sum_probs=81.0
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEEEcC
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVED 214 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~VGD 214 (268)
-++-|+..+.++ ++|+++.++|.-.+..++.+-++ +|++.++.-+. ..-|.+.++++.++ | ..+.||||
T Consensus 536 D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~-lGId~v~Aell---PedK~~~V~~l~~~-g---~~VamVGD 607 (713)
T COG2217 536 DELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKE-LGIDEVRAELL---PEDKAEIVRELQAE-G---RKVAMVGD 607 (713)
T ss_pred CCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cChHhheccCC---cHHHHHHHHHHHhc-C---CEEEEEeC
Confidence 468899999998 89999999999999999999996 99965543322 12477788777643 2 56899999
Q ss_pred cHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecC--hhHHhh
Q 024375 215 RLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ--LSDFCT 265 (268)
Q Consensus 215 s~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~--~~~~~~ 265 (268)
..||.-+=.. | -||+.-|-|+.-..+.+ |+++.+ |.++..
T Consensus 608 GINDAPALA~----A---dVGiAmG~GtDvA~eaA----DvvL~~~dL~~v~~ 649 (713)
T COG2217 608 GINDAPALAA----A---DVGIAMGSGTDVAIEAA----DVVLMRDDLSAVPE 649 (713)
T ss_pred CchhHHHHhh----c---CeeEeecCCcHHHHHhC----CEEEecCCHHHHHH
Confidence 9999877665 3 38888887765555543 466655 666544
No 156
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=97.03 E-value=0.002 Score=62.13 Aligned_cols=94 Identities=17% Similarity=0.257 Sum_probs=65.7
Q ss_pred CccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcC--------CCCCCceEecCCCCCc------H-----------
Q 024375 141 YPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAG--------VTITPDRLYGLGTGPK------V----------- 192 (268)
Q Consensus 141 ypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~g--------l~~~f~~i~g~~~~pk------p----------- 192 (268)
=|.+..+|+ +.|.++.++||.+-.+++.+++..+| |..+||.||....||. |
T Consensus 185 ~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP~FF~~~~pfr~vd~~~g~l 264 (448)
T PF05761_consen 185 DPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKPGFFTEGRPFREVDTETGKL 264 (448)
T ss_dssp -CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CCHHHCT---EEEEETTTSSE
T ss_pred CchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCCCcccCCCCceEEEECCCCcc
Confidence 378888888 78999999999999999999995444 4579999996432211 0
Q ss_pred -----------------HHHHHHHhcCCCCCCcEEEEcCcH-hhHHHhhccCccCCCcEEEEe
Q 024375 193 -----------------NVLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVD 237 (268)
Q Consensus 193 -----------------~~l~~~~~~l~~~~~~~~~VGDs~-~Di~aa~~~~~~agi~~i~v~ 237 (268)
--+..+++.+|....+++||||.. .||...+.. .|.+|++|-
T Consensus 265 ~~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~~---~gWrT~~Ii 324 (448)
T PF05761_consen 265 KWGKYVGPLEKGKVYSGGNWDQLHKLLGWRGKEVLYFGDHIYGDILKSKKR---HGWRTAAII 324 (448)
T ss_dssp ECS---SS--TC-EEEE--HHHHHHHCT--GGGEEEEESSTTTTHHHHHHH---H-SEEEEE-
T ss_pred ccccccccccCCCEeecCCHHHHHHHHccCCCeEEEECCchhhhhhhhccc---cceEEEEEe
Confidence 124556666788888999999987 699999884 699999994
No 157
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=97.02 E-value=0.008 Score=54.14 Aligned_cols=80 Identities=15% Similarity=0.178 Sum_probs=51.7
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCch---HHHHHHHHHhcCCCCCCceEe--cCCC-CC------cHHHHHHHHhc
Q 024375 137 ANRLYPGVSDALK---LASSRIYIVTSNQS---RFVETLLRELAGVTITPDRLY--GLGT-GP------KVNVLKQLQKK 201 (268)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~l~IvTnK~~---~~~~~~L~~~~gl~~~f~~i~--g~~~-~p------kp~~l~~~~~~ 201 (268)
..++.||+.++.+ ++|+++.++||.++ +.+.+-|++ .|...+ +.++ +.+. .+ |.+.-.++.++
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~k-aGy~~~-~~LiLR~~~D~~~~~av~yKs~~R~~li~e 220 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKK-AGYHTW-EKLILKDPQDNSAENAVEYKTAARAKLIQE 220 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHH-cCCCCc-ceeeecCCCCCccchhHHHHHHHHHHHHHc
Confidence 3578899999999 79999999999886 446666775 787654 4343 2211 12 22333333322
Q ss_pred -CCCCCCcEEEEcCcHhhHHHh
Q 024375 202 -PEHQGLRLHFVEDRLATLKNV 222 (268)
Q Consensus 202 -l~~~~~~~~~VGDs~~Di~aa 222 (268)
+.+ +..|||..+|+.+.
T Consensus 221 GYrI----v~~iGDq~sDl~G~ 238 (275)
T TIGR01680 221 GYNI----VGIIGDQWNDLKGE 238 (275)
T ss_pred CceE----EEEECCCHHhccCC
Confidence 223 37899999999543
No 158
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=96.99 E-value=0.0036 Score=63.28 Aligned_cols=101 Identities=16% Similarity=0.171 Sum_probs=73.7
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCC-CCcHHHHHHHHhcCCCCCCcEEEEcC
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT-GPKVNVLKQLQKKPEHQGLRLHFVED 214 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~-~pkp~~l~~~~~~l~~~~~~~~~VGD 214 (268)
++-||+.+.++ +.|+++.++|.-....+..+.++ .|++.+ +..-. ..|-+.++.+.++ ...+.|+||
T Consensus 446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~-lGI~~v----~a~~~PedK~~~v~~lq~~----g~~VamvGD 516 (675)
T TIGR01497 446 IVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAE-AGVDDF----IAEATPEDKIALIRQEQAE----GKLVAMTGD 516 (675)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCEE----EcCCCHHHHHHHHHHHHHc----CCeEEEECC
Confidence 67799999999 79999999999999999999996 998643 32221 2466677776544 236899999
Q ss_pred cHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecC
Q 024375 215 RLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ 259 (268)
Q Consensus 215 s~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~ 259 (268)
..||.-+-+. |+ +++..|-++....+.+ ++++.+
T Consensus 517 G~NDapAL~~----Ad---vGiAm~~gt~~akeaa----divLld 550 (675)
T TIGR01497 517 GTNDAPALAQ----AD---VGVAMNSGTQAAKEAA----NMVDLD 550 (675)
T ss_pred CcchHHHHHh----CC---EeEEeCCCCHHHHHhC----CEEECC
Confidence 9999999887 44 6677775444323322 466643
No 159
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=96.89 E-value=0.0068 Score=61.31 Aligned_cols=101 Identities=17% Similarity=0.177 Sum_probs=72.7
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEEEcCc
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDR 215 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~VGDs 215 (268)
++-||+.+.++ +.|+++.++|.-....+..+-++ .|++.+|..+ ....|-++++.+.++ .+-+.|+||.
T Consensus 441 p~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~e-lGI~~v~A~~---~PedK~~iV~~lQ~~----G~~VaMtGDG 512 (673)
T PRK14010 441 VIKDGLVERFRELREMGIETVMCTGDNELTAATIAKE-AGVDRFVAEC---KPEDKINVIREEQAK----GHIVAMTGDG 512 (673)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCceEEcCC---CHHHHHHHHHHHHhC----CCEEEEECCC
Confidence 67899999999 78999999999999999999996 9997544322 111455666655433 2457899999
Q ss_pred HhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeec
Q 024375 216 LATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLL 258 (268)
Q Consensus 216 ~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~ 258 (268)
.||.-|=++ |. ||+.-|-++.-..+.+ |.++.
T Consensus 513 vNDAPALa~----AD---VGIAMgsGTdvAkeAA----DiVLl 544 (673)
T PRK14010 513 TNDAPALAE----AN---VGLAMNSGTMSAKEAA----NLIDL 544 (673)
T ss_pred hhhHHHHHh----CC---EEEEeCCCCHHHHHhC----CEEEc
Confidence 999988887 43 7888885544333322 36664
No 160
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=96.81 E-value=0.0065 Score=61.48 Aligned_cols=105 Identities=15% Similarity=0.191 Sum_probs=75.5
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCC-CCcHHHHHHHHhcCCCCCCcEEEEcC
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT-GPKVNVLKQLQKKPEHQGLRLHFVED 214 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~-~pkp~~l~~~~~~l~~~~~~~~~VGD 214 (268)
++-||+.+.++ +.|+++.++|.-....+..+-++ .|++.+ +..-. ..|-+.++.+.++ .+-+.|+||
T Consensus 445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~e-lGId~v----~A~~~PedK~~iV~~lQ~~----G~~VaMtGD 515 (679)
T PRK01122 445 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAE-AGVDDF----LAEATPEDKLALIRQEQAE----GRLVAMTGD 515 (679)
T ss_pred cCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCcEE----EccCCHHHHHHHHHHHHHc----CCeEEEECC
Confidence 67899999998 79999999999999999999996 999653 33221 1466666665543 244789999
Q ss_pred cHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeec--ChhHH
Q 024375 215 RLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLL--QLSDF 263 (268)
Q Consensus 215 s~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~--~~~~~ 263 (268)
..||.-|=++ |. ||+.-|-++.-..+.+ |+++. +++.+
T Consensus 516 GvNDAPALa~----AD---VGIAMgsGTdvAkeAA----DiVLldd~~s~I 555 (679)
T PRK01122 516 GTNDAPALAQ----AD---VGVAMNSGTQAAKEAG----NMVDLDSNPTKL 555 (679)
T ss_pred CcchHHHHHh----CC---EeEEeCCCCHHHHHhC----CEEEeCCCHHHH
Confidence 9999988887 43 7888885554333332 46665 35544
No 161
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=96.66 E-value=0.0095 Score=53.23 Aligned_cols=121 Identities=19% Similarity=0.269 Sum_probs=81.7
Q ss_pred ccHHHHHHhCCCcEEEEcCCchHHH---HHHHHHhcCCCCCCce-----Ee------c-CC------------CC-CcHH
Q 024375 142 PGVSDALKLASSRIYIVTSNQSRFV---ETLLRELAGVTITPDR-----LY------G-LG------------TG-PKVN 193 (268)
Q Consensus 142 pGv~e~L~~~g~~l~IvTnK~~~~~---~~~L~~~~gl~~~f~~-----i~------g-~~------------~~-pkp~ 193 (268)
|.+.+-|+++|+++..+|..+..+. .+-|++ +|++.--.. .+ . .. .+ +|-+
T Consensus 87 ~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~-~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft~~~~KG~ 165 (252)
T PF11019_consen 87 PNIINSLQNKGIPVIALTARGPNMEDWTLRELKS-LGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILFTGGQDKGE 165 (252)
T ss_pred HHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHH-CCCCccccccccCcceecccccCCCCCCceeecCeEEeCCCccHH
Confidence 4444444489999999998776654 445564 777532111 00 1 11 12 7889
Q ss_pred HHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhh
Q 024375 194 VLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTK 266 (268)
Q Consensus 194 ~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~ 266 (268)
++..++.+.+..|+.+|||.|+...+....++-...||.++|..|..... ... .+.|.+.-.+....++.
T Consensus 166 ~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Yt~~~~--~~~-~~~~~~~~~~~~~~~~~ 235 (252)
T PF11019_consen 166 VLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKKSGIDFIGFHYTGAEE--RPP-DPYPKIAEVQEQQQAKW 235 (252)
T ss_pred HHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEEcchhh--ccC-cccchHHHHHHHHHHHH
Confidence 99999999999999999999999998877666666999999999986432 111 44555554444444443
No 162
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=96.60 E-value=0.0022 Score=54.62 Aligned_cols=40 Identities=15% Similarity=0.028 Sum_probs=36.5
Q ss_pred CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcE
Q 024375 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~ 233 (268)
+|+..+..++++++++++++++|||+.+|+.+.+. +|+.+
T Consensus 163 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~----~~~~v 202 (204)
T TIGR01484 163 DKGSALQALLKELNGKRDEILAFGDSGNDEEMFEV----AGLAV 202 (204)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHH----cCCce
Confidence 89999999999999999999999999999999998 55543
No 163
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=96.14 E-value=0.012 Score=45.04 Aligned_cols=80 Identities=18% Similarity=0.255 Sum_probs=47.4
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHH---HHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEE
Q 024375 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRF---VETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLH 210 (268)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~l~IvTnK~~~~---~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~ 210 (268)
...++||+.|+|+ ++|+++.++||.+... ..+.|++ +|+..-.+.|+.+ .......+++. ....++.
T Consensus 12 g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~-~Gi~~~~~~i~ts-----~~~~~~~l~~~-~~~~~v~ 84 (101)
T PF13344_consen 12 GNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKK-LGIPVDEDEIITS-----GMAAAEYLKEH-KGGKKVY 84 (101)
T ss_dssp TTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHH-TTTT--GGGEEEH-----HHHHHHHHHHH-TTSSEEE
T ss_pred CCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHh-cCcCCCcCEEECh-----HHHHHHHHHhc-CCCCEEE
Confidence 3579999999999 7999999999977433 3344464 8887666667653 23444444442 2245677
Q ss_pred EEcCcHhhHHHhhc
Q 024375 211 FVEDRLATLKNVIK 224 (268)
Q Consensus 211 ~VGDs~~Di~aa~~ 224 (268)
+||-. ...+..+.
T Consensus 85 vlG~~-~l~~~l~~ 97 (101)
T PF13344_consen 85 VLGSD-GLREELRE 97 (101)
T ss_dssp EES-H-HHHHHHHH
T ss_pred EEcCH-HHHHHHHH
Confidence 77754 33333343
No 164
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=96.07 E-value=0.035 Score=49.94 Aligned_cols=72 Identities=17% Similarity=0.254 Sum_probs=50.5
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCc---hHHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEE
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQ---SRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHF 211 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~---~~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~ 211 (268)
..++||+.++|+ ++|++++++||.+ .......|++ +|+....+.|+.+ .......+++......++++
T Consensus 17 ~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~-~G~~~~~~~i~ts-----~~~~~~~l~~~~~~~~~v~~ 90 (279)
T TIGR01452 17 ERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFAR-LGFNGLAEQLFSS-----ALCAARLLRQPPDAPKAVYV 90 (279)
T ss_pred CeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH-cCCCCChhhEecH-----HHHHHHHHHhhCcCCCEEEE
Confidence 468999999998 7899999999954 4444456775 8887555666543 24555555554344567888
Q ss_pred EcCc
Q 024375 212 VEDR 215 (268)
Q Consensus 212 VGDs 215 (268)
||+.
T Consensus 91 iG~~ 94 (279)
T TIGR01452 91 IGEE 94 (279)
T ss_pred EcCH
Confidence 9985
No 165
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=96.04 E-value=0.033 Score=58.16 Aligned_cols=105 Identities=19% Similarity=0.252 Sum_probs=70.8
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC----------------------C-CCc
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----------------------T-GPK 191 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----------------------~-~pk 191 (268)
.++-|++.+.++ ++|+++.++|+-....+..+-++ .|+..- +.+.|.+ . ..|
T Consensus 514 Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~-lGI~~~-~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K 591 (867)
T TIGR01524 514 DPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQE-VGIDAN-DFLLGADIEELSDEELARELRKYHIFARLTPMQK 591 (867)
T ss_pred CCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCCC-CeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHH
Confidence 467899999999 79999999999999999999996 999621 2233322 0 123
Q ss_pred HHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecC
Q 024375 192 VNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ 259 (268)
Q Consensus 192 p~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~ 259 (268)
-+++..+. +. .+.+.|+||+.||.-|=++ |+ ||+.-|-++. ..... -|+++.+
T Consensus 592 ~~iV~~lq-~~---G~vVam~GDGvNDapALk~----Ad---VGIAmg~gtd--vAk~a--ADiVLld 644 (867)
T TIGR01524 592 SRIIGLLK-KA---GHTVGFLGDGINDAPALRK----AD---VGISVDTAAD--IAKEA--SDIILLE 644 (867)
T ss_pred HHHHHHHH-hC---CCEEEEECCCcccHHHHHh----CC---EEEEeCCccH--HHHHh--CCEEEec
Confidence 34444433 22 3468899999999999887 44 6666673332 32222 2477644
No 166
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=95.95 E-value=0.046 Score=57.58 Aligned_cols=113 Identities=17% Similarity=0.191 Sum_probs=76.1
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCc-----------------------eEecCCC-CC
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPD-----------------------RLYGLGT-GP 190 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~-----------------------~i~g~~~-~p 190 (268)
.++-|++.++++ ++|+++.++|+-....+..+-++ .|+...-. .|++.-. ..
T Consensus 578 Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~-~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~ 656 (941)
T TIGR01517 578 DPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARN-CGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLD 656 (941)
T ss_pred CCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHH-cCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHH
Confidence 378899999999 79999999999999999999996 99963211 1222111 13
Q ss_pred cHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeec--ChhHHhh
Q 024375 191 KVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLL--QLSDFCT 265 (268)
Q Consensus 191 kp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~--~~~~~~~ 265 (268)
|-+++..+.+ .| +-+.|+||+.||.-|=++ |. ||+.-|-...+ .... ..|+++. +++.+..
T Consensus 657 K~~iV~~lq~-~g---~vVam~GDGvNDapALk~----Ad---VGIAmg~~gtd-vAk~--aADivL~dd~f~~I~~ 719 (941)
T TIGR01517 657 KQLLVLMLKD-MG---EVVAVTGDGTNDAPALKL----AD---VGFSMGISGTE-VAKE--ASDIILLDDNFASIVR 719 (941)
T ss_pred HHHHHHHHHH-CC---CEEEEECCCCchHHHHHh----CC---cceecCCCccH-HHHH--hCCEEEecCCHHHHHH
Confidence 4455555443 23 458999999999999887 43 66766733222 2222 2468887 5665543
No 167
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=95.95 E-value=0.044 Score=58.37 Aligned_cols=112 Identities=13% Similarity=0.170 Sum_probs=74.7
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCC----------CceEe-cCC----------------
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTIT----------PDRLY-GLG---------------- 187 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~----------f~~i~-g~~---------------- 187 (268)
.++-|++.++++ ++|+++.++|+-....+..+-++ .|+... -..++ |.+
T Consensus 645 Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~-~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~ 723 (1053)
T TIGR01523 645 DPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQE-VGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALC 723 (1053)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH-cCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcC
Confidence 377899999999 89999999999999999999996 999532 11222 221
Q ss_pred ------C-CCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecC-
Q 024375 188 ------T-GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ- 259 (268)
Q Consensus 188 ------~-~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~- 259 (268)
. ..|-+++..+.+ . .+.+.|+||+.||.-|=+. |+ ||+.-|....+--+++ -|+++.+
T Consensus 724 ~V~ar~sP~~K~~iV~~lq~-~---g~~Vam~GDGvNDapaLk~----Ad---VGIAmg~~gt~vak~a---ADivl~dd 789 (1053)
T TIGR01523 724 LVIARCAPQTKVKMIEALHR-R---KAFCAMTGDGVNDSPSLKM----AN---VGIAMGINGSDVAKDA---SDIVLSDD 789 (1053)
T ss_pred eEEEecCHHHHHHHHHHHHh-c---CCeeEEeCCCcchHHHHHh----CC---ccEecCCCccHHHHHh---cCEEEecC
Confidence 0 023344444333 2 3458899999999999887 43 6666675443332322 3577755
Q ss_pred -hhHHh
Q 024375 260 -LSDFC 264 (268)
Q Consensus 260 -~~~~~ 264 (268)
.+.+.
T Consensus 790 ~f~~I~ 795 (1053)
T TIGR01523 790 NFASIL 795 (1053)
T ss_pred CHHHHH
Confidence 55553
No 168
>PTZ00174 phosphomannomutase; Provisional
Probab=95.93 E-value=0.0046 Score=54.69 Aligned_cols=40 Identities=18% Similarity=0.047 Sum_probs=32.9
Q ss_pred CcHHHHHHHHhcCCCCCCcEEEEcC----cHhhHHHhhccCccCCCcEEEEe
Q 024375 190 PKVNVLKQLQKKPEHQGLRLHFVED----RLATLKNVIKEPELDGWNLYLVD 237 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~~~~~~~VGD----s~~Di~aa~~~~~~agi~~i~v~ 237 (268)
.|...+..+++. +++++.||| +.||+.+=+. ++...++|.
T Consensus 188 sKg~al~~L~~~----~~eviafGD~~~~~~NDieMl~~----~~~~g~~v~ 231 (247)
T PTZ00174 188 DKTYCLRHLEND----FKEIHFFGDKTFEGGNDYEIYND----PRTIGHSVK 231 (247)
T ss_pred cHHHHHHHHHhh----hhhEEEEcccCCCCCCcHhhhhc----CCCceEEeC
Confidence 788999999887 589999999 8999999886 455455554
No 169
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=95.92 E-value=0.043 Score=56.42 Aligned_cols=106 Identities=16% Similarity=0.145 Sum_probs=69.7
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCC---ce-----------------------EecCCC
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITP---DR-----------------------LYGLGT 188 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f---~~-----------------------i~g~~~ 188 (268)
.++-|++.++++ +.|+++.++|+-....+..+-++ .|+.... +. +++.-.
T Consensus 441 Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~-lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~ 519 (755)
T TIGR01647 441 DPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARR-LGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVF 519 (755)
T ss_pred CCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecC
Confidence 478899999999 79999999999999999999996 9996410 00 121111
Q ss_pred C-CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecC
Q 024375 189 G-PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ 259 (268)
Q Consensus 189 ~-pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~ 259 (268)
. .|.++++.+. + ..+-+.|+||+.||.-|=++ |. ||+.-|-++. ..... -|+++.+
T Consensus 520 Pe~K~~iV~~lq-~---~G~~VamvGDGvNDapAL~~----Ad---VGIAm~~gtd--vAkea--ADivLl~ 576 (755)
T TIGR01647 520 PEHKYEIVEILQ-K---RGHLVGMTGDGVNDAPALKK----AD---VGIAVAGATD--AARSA--ADIVLTE 576 (755)
T ss_pred HHHHHHHHHHHH-h---cCCEEEEEcCCcccHHHHHh----CC---eeEEecCCcH--HHHHh--CCEEEEc
Confidence 1 3444444433 2 23458999999999988887 44 5555563332 32222 3466654
No 170
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=95.91 E-value=0.046 Score=57.33 Aligned_cols=105 Identities=20% Similarity=0.251 Sum_probs=70.5
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC----------------------CC-Cc
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----------------------TG-PK 191 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----------------------~~-pk 191 (268)
.++-|++.++++ ++|+++.++|+-....+..+-++ .|+..- ..+-|.+ .. .|
T Consensus 549 Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~-lGI~~~-~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K 626 (903)
T PRK15122 549 DPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICRE-VGLEPG-EPLLGTEIEAMDDAALAREVEERTVFAKLTPLQK 626 (903)
T ss_pred CccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCCC-CccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHH
Confidence 367899999999 79999999999999999999996 999521 2222222 10 23
Q ss_pred HHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecC
Q 024375 192 VNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ 259 (268)
Q Consensus 192 p~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~ 259 (268)
-.++..+.+ ..+-+.|+||+.||.-|=++ |. ||+.-|-++. .....+ |+++.+
T Consensus 627 ~~iV~~Lq~----~G~vVamtGDGvNDaPALk~----AD---VGIAmg~gtd--vAkeaA--DiVLld 679 (903)
T PRK15122 627 SRVLKALQA----NGHTVGFLGDGINDAPALRD----AD---VGISVDSGAD--IAKESA--DIILLE 679 (903)
T ss_pred HHHHHHHHh----CCCEEEEECCCchhHHHHHh----CC---EEEEeCcccH--HHHHhc--CEEEec
Confidence 344444432 23458999999999998887 43 6666673332 322222 477743
No 171
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=95.82 E-value=0.048 Score=57.15 Aligned_cols=105 Identities=19% Similarity=0.215 Sum_probs=70.7
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC----------------------CC-Cc
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----------------------TG-PK 191 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----------------------~~-pk 191 (268)
.++-|++.++++ ++|+++.++|+-....+..+-++ .|+..- ..+.|.+ .. .|
T Consensus 549 Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~-lGI~~~-~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K 626 (902)
T PRK10517 549 DPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHE-VGLDAG-EVLIGSDIETLSDDELANLAERTTLFARLTPMHK 626 (902)
T ss_pred CcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCcc-CceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHH
Confidence 367799999998 79999999999999999999996 999521 2222322 00 23
Q ss_pred HHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecC
Q 024375 192 VNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ 259 (268)
Q Consensus 192 p~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~ 259 (268)
-+++..+. +. .+-+.|+||+.||.-|=++ |. ||+.-|-++. .....+ |+++.+
T Consensus 627 ~~IV~~Lq-~~---G~vVam~GDGvNDaPALk~----AD---VGIAmg~gtd--vAkeaA--DiVLld 679 (902)
T PRK10517 627 ERIVTLLK-RE---GHVVGFMGDGINDAPALRA----AD---IGISVDGAVD--IAREAA--DIILLE 679 (902)
T ss_pred HHHHHHHH-HC---CCEEEEECCCcchHHHHHh----CC---EEEEeCCcCH--HHHHhC--CEEEec
Confidence 34444433 22 3458899999999998887 43 6777774432 332222 477754
No 172
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=95.58 E-value=0.033 Score=47.17 Aligned_cols=97 Identities=13% Similarity=0.097 Sum_probs=64.7
Q ss_pred cccccCCCCCccHHHHHH---hCCCcEEEEcCCchH---HHHHHHHHhcCCCCCCceEecCCCCCcHHHH--HHHHhcCC
Q 024375 132 TTWIGANRLYPGVSDALK---LASSRIYIVTSNQSR---FVETLLRELAGVTITPDRLYGLGTGPKVNVL--KQLQKKPE 203 (268)
Q Consensus 132 ~~~~~~~~lypGv~e~L~---~~g~~l~IvTnK~~~---~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l--~~~~~~l~ 203 (268)
.+|...+-|..=+++++. ++|-.++.+|+...- .+-+.|...|.|+..-.+++.++ +|||.-. ...+...+
T Consensus 107 ~g~D~~SIPKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~pv~f~Gd-k~k~~qy~Kt~~i~~~~ 185 (237)
T COG3700 107 NGWDEFSIPKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMNPVIFAGD-KPKPGQYTKTQWIQDKN 185 (237)
T ss_pred cCCccccchHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCcceeeccC-CCCcccccccHHHHhcC
Confidence 467777778787888888 799999999976543 33344444588887777777555 3343322 12334445
Q ss_pred CCCCcEEEEcCcHhhHHHhhccCccCCCcEE
Q 024375 204 HQGLRLHFVEDRLATLKNVIKEPELDGWNLY 234 (268)
Q Consensus 204 ~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i 234 (268)
+. ++-|||.+||.||+++|+. ||+..
T Consensus 186 ~~----IhYGDSD~Di~AAkeaG~R-gIRil 211 (237)
T COG3700 186 IR----IHYGDSDNDITAAKEAGAR-GIRIL 211 (237)
T ss_pred ce----EEecCCchhhhHHHhcCcc-ceeEE
Confidence 54 8999999999999995442 44433
No 173
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=95.44 E-value=0.061 Score=46.93 Aligned_cols=33 Identities=15% Similarity=0.149 Sum_probs=21.0
Q ss_pred CCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEec
Q 024375 151 ASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYG 185 (268)
Q Consensus 151 ~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g 185 (268)
+|++++|+|+++...+..+++. +++.. ++.++|
T Consensus 29 ~gi~~viaTGR~~~~v~~~~~~-l~l~~-~~~~I~ 61 (236)
T TIGR02471 29 DAVGFGIATGRSVESAKSRYAK-LNLPS-PDVLIA 61 (236)
T ss_pred CCceEEEEeCCCHHHHHHHHHh-CCCCC-CCEEEE
Confidence 5667777777777777777775 66642 344444
No 174
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=95.04 E-value=0.14 Score=52.90 Aligned_cols=102 Identities=16% Similarity=0.203 Sum_probs=75.2
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCCC-CcHHHHHHHHhcCCCCCCcEEEEcC
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVED 214 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~~-pkp~~l~~~~~~l~~~~~~~~~VGD 214 (268)
.+-|++..++. +.|++++++|+-....++.+-++ .| ++.|++.-.. .|.+.+.++.++- ..+.||||
T Consensus 723 ~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~-VG----i~~V~aev~P~~K~~~Ik~lq~~~----~~VaMVGD 793 (951)
T KOG0207|consen 723 QVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQ-VG----IDNVYAEVLPEQKAEKIKEIQKNG----GPVAMVGD 793 (951)
T ss_pred ccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHh-hC----cceEEeccCchhhHHHHHHHHhcC----CcEEEEeC
Confidence 56688777776 89999999999999999999997 88 5677764432 6788888877653 45799999
Q ss_pred cHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecCh
Q 024375 215 RLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQL 260 (268)
Q Consensus 215 s~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~ 260 (268)
..||--|=.. | .+|+.=|-++.-..+.+ |+++..-
T Consensus 794 GINDaPALA~----A---dVGIaig~gs~vAieaA----DIVLmrn 828 (951)
T KOG0207|consen 794 GINDAPALAQ----A---DVGIAIGAGSDVAIEAA----DIVLMRN 828 (951)
T ss_pred CCCccHHHHh----h---ccceeeccccHHHHhhC----CEEEEcc
Confidence 9999765443 2 37777787765444433 4666543
No 175
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=95.01 E-value=0.011 Score=48.42 Aligned_cols=80 Identities=16% Similarity=0.074 Sum_probs=56.3
Q ss_pred CCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhcCC-CCCCceEecCCCC---CcHHHHHHHHhcCCCCCCcEEEE
Q 024375 139 RLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGV-TITPDRLYGLGTG---PKVNVLKQLQKKPEHQGLRLHFV 212 (268)
Q Consensus 139 ~lypGv~e~L~--~~g~~l~IvTnK~~~~~~~~L~~~~gl-~~~f~~i~g~~~~---pkp~~l~~~~~~l~~~~~~~~~V 212 (268)
.+-||+.++|+ .+.+.++|.|+..+.+++.+++. +.- ..+|+.++..+.. .+.. .+-++.++-+.+++|+|
T Consensus 36 ~~RP~l~~FL~~l~~~~ev~i~T~~~~~ya~~v~~~-ldp~~~~~~~~~~r~~~~~~~~~~--~KdL~~l~~~~~~vviv 112 (159)
T PF03031_consen 36 KLRPGLDEFLEELSKHYEVVIWTSASEEYAEPVLDA-LDPNGKLFSRRLYRDDCTFDKGSY--IKDLSKLGRDLDNVVIV 112 (159)
T ss_dssp EE-TTHHHHHHHHHHHCEEEEE-SS-HHHHHHHHHH-HTTTTSSEEEEEEGGGSEEETTEE--E--GGGSSS-GGGEEEE
T ss_pred eeCchHHHHHHHHHHhceEEEEEeehhhhhhHHHHh-hhhhcccccccccccccccccccc--ccchHHHhhccccEEEE
Confidence 45699999999 78899999999999999999996 876 4678888865421 1111 14566677778899999
Q ss_pred cCcHhhHHH
Q 024375 213 EDRLATLKN 221 (268)
Q Consensus 213 GDs~~Di~a 221 (268)
.|++.-...
T Consensus 113 DD~~~~~~~ 121 (159)
T PF03031_consen 113 DDSPRKWAL 121 (159)
T ss_dssp ES-GGGGTT
T ss_pred eCCHHHeec
Confidence 999886543
No 176
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=94.91 E-value=0.41 Score=46.72 Aligned_cols=65 Identities=12% Similarity=0.120 Sum_probs=44.8
Q ss_pred CCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHHhCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC
Q 024375 109 SENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG 187 (268)
Q Consensus 109 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~ 187 (268)
|+..+++++...++...|... -+-|...+...++| +.+|+|..|+..++..++.++|. |.|+|.+
T Consensus 75 Gl~~~die~vaRavlpkf~~~---------dv~~e~~~~~~~~g-~~vVVTAsPrvmVEpFake~LG~----D~VvGTE 139 (498)
T PLN02499 75 GVHESEIESVARAVLPKFYMD---------DVDMEAWKVFSSCD-KRVVVTRMPRVMVERFAKEHLRA----DEVIGSE 139 (498)
T ss_pred CCCHHHHHHHHHHHhhHHHHh---------hCCHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHhcCC----ceEEeee
Confidence 677777766666666553221 12344555555677 99999999999999999965675 5666654
No 177
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=94.90 E-value=0.19 Score=53.31 Aligned_cols=112 Identities=14% Similarity=0.189 Sum_probs=72.9
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCC------------------------ceEe-cCC--
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITP------------------------DRLY-GLG-- 187 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f------------------------~~i~-g~~-- 187 (268)
.+|-|++.++++ ++|+++.++|+-....+..+.++ .|+..-- ..++ |.+
T Consensus 567 Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~-~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~ 645 (997)
T TIGR01106 567 DPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKG-VGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLK 645 (997)
T ss_pred CCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCCCCccchhhhhhhccccccccccccccceEEEhHHhh
Confidence 367899999999 79999999999999999999996 9984210 1222 221
Q ss_pred ----------------------CC-CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHH
Q 024375 188 ----------------------TG-PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPK 244 (268)
Q Consensus 188 ----------------------~~-pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~ 244 (268)
.. .|-.++.. +++.| +-+.|+||+.||+-|=+. |+ ||+.-|....+
T Consensus 646 ~l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~-lq~~g---~vv~~~GDG~ND~paLk~----Ad---VGiamg~~G~~ 714 (997)
T TIGR01106 646 DMTSEQLDEILKYHTEIVFARTSPQQKLIIVEG-CQRQG---AIVAVTGDGVNDSPALKK----AD---IGVAMGIAGSD 714 (997)
T ss_pred hCCHHHHHHHHHhcCCEEEEECCHHHHHHHHHH-HHHCC---CEEEEECCCcccHHHHhh----CC---cceecCCcccH
Confidence 00 12233333 33333 358899999999999887 43 66776754333
Q ss_pred HHHhcCCCCCeeecC--hhHHh
Q 024375 245 ERAEAASMPRIQLLQ--LSDFC 264 (268)
Q Consensus 245 el~~~~~~P~~~~~~--~~~~~ 264 (268)
-.+++ -|+++.+ .+.+.
T Consensus 715 vak~a---ADivL~dd~f~~Iv 733 (997)
T TIGR01106 715 VSKQA---ADMILLDDNFASIV 733 (997)
T ss_pred HHHHh---hceEEecCCHHHHH
Confidence 23332 2577766 44443
No 178
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=94.73 E-value=0.14 Score=54.61 Aligned_cols=39 Identities=15% Similarity=0.326 Sum_probs=34.3
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCC
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVT 177 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~ 177 (268)
.+|-|||.++++ ++|+++.++|+-..+.|..+-++ .|+-
T Consensus 630 D~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~-~~ii 671 (1057)
T TIGR01652 630 DKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYS-CRLL 671 (1057)
T ss_pred hhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHH-hCCC
Confidence 478899999999 89999999999999999999875 7764
No 179
>COG5663 Uncharacterized conserved protein [Function unknown]
Probab=94.64 E-value=0.089 Score=44.06 Aligned_cols=87 Identities=21% Similarity=0.220 Sum_probs=58.0
Q ss_pred ccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhcCC-CCCCceE--ecCCCCCcHHHHHHHHhcCCCCCCcEEEEcCcH
Q 024375 142 PGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGV-TITPDRL--YGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRL 216 (268)
Q Consensus 142 pGv~e~L~--~~g~~l~IvTnK~~~~~~~~L~~~~gl-~~~f~~i--~g~~~~pkp~~l~~~~~~l~~~~~~~~~VGDs~ 216 (268)
.+|...|. ++..+++-+|+....+.+..=.- +.. ...++.+ +|.. .|.+ +.+.++++ +|+.|+.
T Consensus 75 q~v~~~L~~~~e~~~L~~itar~~dl~~iT~~~-l~~q~ih~~~l~i~g~h--~KV~----~vrth~id----lf~ed~~ 143 (194)
T COG5663 75 QLVKQVLPSLKEEHRLIYITARKADLTRITYAW-LFIQNIHYDHLEIVGLH--HKVE----AVRTHNID----LFFEDSH 143 (194)
T ss_pred HHHHHHhHHHHhhceeeeeehhhHHHHHHHHHH-HHHhccchhhhhhhccc--ccch----hhHhhccC----ccccccC
Confidence 56778887 77888999999998887665442 222 1234443 3432 2322 45566777 9999997
Q ss_pred hh-HHHhhccCccCCCcEEEEecCCCCH
Q 024375 217 AT-LKNVIKEPELDGWNLYLVDWGYNTP 243 (268)
Q Consensus 217 ~D-i~aa~~~~~~agi~~i~v~wGy~~~ 243 (268)
-. ++.|++ +|+|++....-|+..
T Consensus 144 ~na~~iAk~----~~~~vilins~ynRk 167 (194)
T COG5663 144 DNAGQIAKN----AGIPVILINSPYNRK 167 (194)
T ss_pred chHHHHHHh----cCCcEEEecCccccc
Confidence 54 455565 899999998887653
No 180
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=94.63 E-value=0.033 Score=47.79 Aligned_cols=52 Identities=21% Similarity=0.134 Sum_probs=41.4
Q ss_pred CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhc
Q 024375 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEA 249 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~ 249 (268)
.|...+..+++.+|+++++++.|||+.+|+.+-+. +| .++.=|... +++++.
T Consensus 186 sK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~----~~---~~~am~na~-~~~k~~ 237 (254)
T PF08282_consen 186 SKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLEL----AG---YSVAMGNAT-PELKKA 237 (254)
T ss_dssp SHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHH----SS---EEEEETTS--HHHHHH
T ss_pred CHHHHHHHHhhhcccccceeEEeecccccHhHHhh----cC---eEEEEcCCC-HHHHHh
Confidence 89999999999999999999999999999999998 44 334445444 455554
No 181
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=94.37 E-value=0.024 Score=45.32 Aligned_cols=15 Identities=20% Similarity=0.268 Sum_probs=12.9
Q ss_pred CcEEEEecCcccccC
Q 024375 2 EDLYALDFDGVICDS 16 (268)
Q Consensus 2 ~~~vlFDlDGTLvDS 16 (268)
-|+|+||+||||+++
T Consensus 1 ~K~i~~DiDGTL~~~ 15 (126)
T TIGR01689 1 MKRLVMDLDNTITLT 15 (126)
T ss_pred CCEEEEeCCCCcccC
Confidence 079999999999975
No 182
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=94.31 E-value=0.2 Score=44.34 Aligned_cols=82 Identities=15% Similarity=0.217 Sum_probs=57.8
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHH----HHHHHHHhcCCCCCC-ceEe-cCCCCCcHHHHHHHHhcCCCCCC
Q 024375 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRF----VETLLRELAGVTITP-DRLY-GLGTGPKVNVLKQLQKKPEHQGL 207 (268)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~l~IvTnK~~~~----~~~~L~~~~gl~~~f-~~i~-g~~~~pkp~~l~~~~~~l~~~~~ 207 (268)
..++-||+.|+|. ++|.++.-+||..++. +..-|++ +|+...- +.++ =.+.++|..-...+-+.+.
T Consensus 120 ~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~-~g~~~~~~~~~llkk~~k~Ke~R~~~v~k~~~---- 194 (274)
T COG2503 120 KSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKS-EGLPQVLESHLLLKKDKKSKEVRRQAVEKDYK---- 194 (274)
T ss_pred ccccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHH-cCcccccccceEEeeCCCcHHHHHHHHhhccc----
Confidence 3678899999999 8999999999988776 6777886 8886432 2222 2233366655555544333
Q ss_pred cEEEEcCcHhhHHHhh
Q 024375 208 RLHFVEDRLATLKNVI 223 (268)
Q Consensus 208 ~~~~VGDs~~Di~aa~ 223 (268)
-+++|||...|.....
T Consensus 195 iVm~vGDNl~DF~d~~ 210 (274)
T COG2503 195 IVMLVGDNLDDFGDNA 210 (274)
T ss_pred eeeEecCchhhhcchh
Confidence 3689999999985543
No 183
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=94.30 E-value=0.15 Score=45.99 Aligned_cols=52 Identities=37% Similarity=0.562 Sum_probs=38.4
Q ss_pred cCCCCCccHHHHHH---hCCCcEEEEcCCchHHHH---HHHHHhcCCCCCCceEecCC
Q 024375 136 GANRLYPGVSDALK---LASSRIYIVTSNQSRFVE---TLLRELAGVTITPDRLYGLG 187 (268)
Q Consensus 136 ~~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~---~~L~~~~gl~~~f~~i~g~~ 187 (268)
....+|||+.+.|+ ++|+++.++||.+....+ +-|+.+.+++-..+.|+++.
T Consensus 21 ~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~~i~TS~ 78 (269)
T COG0647 21 RGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTPDDIVTSG 78 (269)
T ss_pred eCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHHHeecHH
Confidence 34689999999999 899999999998766444 33332256666677888653
No 184
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=94.13 E-value=0.19 Score=48.94 Aligned_cols=75 Identities=17% Similarity=0.268 Sum_probs=58.5
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC-CCCcHHHHHHHHhcCCCCCCcEEEEc
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-TGPKVNVLKQLQKKPEHQGLRLHFVE 213 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~-~~pkp~~l~~~~~~l~~~~~~~~~VG 213 (268)
..+.|++.++++ ++|+++.++|......+..+-++ .|+ ++.- ..-|.+.+..+.++ | ..+.|||
T Consensus 346 d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~-lgi-------~~~~~p~~K~~~v~~l~~~-g---~~v~~vG 413 (499)
T TIGR01494 346 DPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKE-LGI-------FARVTPEEKAALVEALQKK-G---RVVAMTG 413 (499)
T ss_pred CCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cCc-------eeccCHHHHHHHHHHHHHC-C---CEEEEEC
Confidence 478999999999 79999999999999999999996 886 2211 11455666665332 2 5689999
Q ss_pred CcHhhHHHhhc
Q 024375 214 DRLATLKNVIK 224 (268)
Q Consensus 214 Ds~~Di~aa~~ 224 (268)
|..+|.-+-+.
T Consensus 414 Dg~nD~~al~~ 424 (499)
T TIGR01494 414 DGVNDAPALKK 424 (499)
T ss_pred CChhhHHHHHh
Confidence 99999988876
No 185
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=93.79 E-value=0.07 Score=42.38 Aligned_cols=14 Identities=14% Similarity=0.422 Sum_probs=13.1
Q ss_pred cEEEEecCcccccC
Q 024375 3 DLYALDFDGVICDS 16 (268)
Q Consensus 3 ~~vlFDlDGTLvDS 16 (268)
|+++|||||||.+.
T Consensus 1 kli~~DlD~Tl~~~ 14 (128)
T TIGR01681 1 KVIVFDLDNTLWTG 14 (128)
T ss_pred CEEEEeCCCCCCCC
Confidence 68999999999998
No 186
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=93.72 E-value=0.034 Score=47.71 Aligned_cols=27 Identities=19% Similarity=0.235 Sum_probs=19.6
Q ss_pred EEEecCcccccChhHHHHHHHHHHHHh
Q 024375 5 YALDFDGVICDSCEETALSAVKAARVR 31 (268)
Q Consensus 5 vlFDlDGTLvDS~~~i~~s~~~a~~~~ 31 (268)
|+|||||||+++-..+-.....+++.+
T Consensus 1 i~~DlDGTLl~~~~~i~~~~~~al~~l 27 (254)
T PF08282_consen 1 IFSDLDGTLLNSDGKISPETIEALKEL 27 (254)
T ss_dssp EEEECCTTTCSTTSSSCHHHHHHHHHH
T ss_pred cEEEECCceecCCCeeCHHHHHHHHhh
Confidence 689999999998765555555555554
No 187
>KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism]
Probab=93.53 E-value=0.46 Score=41.78 Aligned_cols=103 Identities=18% Similarity=0.194 Sum_probs=73.3
Q ss_pred hhhccccccccCCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcC-------CCCCCceEecCCCCCcHHHH
Q 024375 126 WMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAG-------VTITPDRLYGLGTGPKVNVL 195 (268)
Q Consensus 126 ~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~g-------l~~~f~~i~g~~~~pkp~~l 195 (268)
|.+-|..+-+. ...||.|...++ .+|++++|-|+-+...-+.+.. |-+ ++.|||.-+|. |..-..+
T Consensus 111 w~~gy~sg~lk-~~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllfg-~s~~gdl~~y~~gyfDt~iG~--K~e~~sy 186 (254)
T KOG2630|consen 111 WAAGYESGELK-AHVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLFG-YSDAGDLRKYISGYFDTTIGL--KVESQSY 186 (254)
T ss_pred HHhhccccccc-ccccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHHc-ccCcchHHHHhhhhhhccccc--eehhHHH
Confidence 44555544443 489999999999 7999999988777665444443 222 23466665542 2334678
Q ss_pred HHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEE
Q 024375 196 KQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLV 236 (268)
Q Consensus 196 ~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v 236 (268)
.++.+.+|.++.+.+|.=|-..-..+|+. +|+.+..+
T Consensus 187 ~~I~~~Ig~s~~eiLfLTd~~~Ea~aa~~----aGl~a~l~ 223 (254)
T KOG2630|consen 187 KKIGHLIGKSPREILFLTDVPREAAAARK----AGLQAGLV 223 (254)
T ss_pred HHHHHHhCCChhheEEeccChHHHHHHHh----cccceeee
Confidence 88999999999999999999999999998 55554444
No 188
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=93.34 E-value=0.045 Score=46.42 Aligned_cols=28 Identities=25% Similarity=0.362 Sum_probs=18.8
Q ss_pred EEEEecCcccccCh-hHHHHHHHHHHHHh
Q 024375 4 LYALDFDGVICDSC-EETALSAVKAARVR 31 (268)
Q Consensus 4 ~vlFDlDGTLvDS~-~~i~~s~~~a~~~~ 31 (268)
+|+||+||||+++- ..+...+..+++++
T Consensus 1 li~~D~DgTL~~~~~~~~~~~~~~~l~~l 29 (204)
T TIGR01484 1 LLFFDLDGTLLDPNAHELSPETIEALERL 29 (204)
T ss_pred CEEEeCcCCCcCCCCCcCCHHHHHHHHHH
Confidence 58999999999875 33444444555554
No 189
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=93.06 E-value=0.07 Score=49.17 Aligned_cols=27 Identities=30% Similarity=0.341 Sum_probs=22.2
Q ss_pred EEEEecCcccccChhHHHHHHHHHHHHh
Q 024375 4 LYALDFDGVICDSCEETALSAVKAARVR 31 (268)
Q Consensus 4 ~vlFDlDGTLvDS~~~i~~s~~~a~~~~ 31 (268)
+++||+||||+++..- +..+..+++.+
T Consensus 2 ~~ifD~DGvL~~g~~~-i~ga~eal~~L 28 (321)
T TIGR01456 2 GFAFDIDGVLFRGKKP-IAGASDALRRL 28 (321)
T ss_pred EEEEeCcCceECCccc-cHHHHHHHHHH
Confidence 6899999999999886 56666677777
No 190
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=92.70 E-value=0.048 Score=41.78 Aligned_cols=15 Identities=33% Similarity=0.472 Sum_probs=13.4
Q ss_pred EEEEecCcccccChh
Q 024375 4 LYALDFDGVICDSCE 18 (268)
Q Consensus 4 ~vlFDlDGTLvDS~~ 18 (268)
+++||+||||+.+-+
T Consensus 1 ~~vfD~D~tl~~~~~ 15 (139)
T cd01427 1 AVLFDLDGTLLDSEP 15 (139)
T ss_pred CeEEccCCceEccCc
Confidence 489999999999986
No 191
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).
Probab=92.56 E-value=1.8 Score=38.47 Aligned_cols=96 Identities=15% Similarity=0.186 Sum_probs=72.5
Q ss_pred CCCCCccHHHHHH------hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCc--eEecCCCC-CcHHHHHHHHhcCCCCCC
Q 024375 137 ANRLYPGVSDALK------LASSRIYIVTSNQSRFVETLLRELAGVTITPD--RLYGLGTG-PKVNVLKQLQKKPEHQGL 207 (268)
Q Consensus 137 ~~~lypGv~e~L~------~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~--~i~g~~~~-pkp~~l~~~~~~l~~~~~ 207 (268)
.-.|+|.+.++++ ++|+.+.-+++.....++++.+ +|-+...- .-||+..+ .+|+.+..+.+..+++
T Consensus 102 ~~~Llpd~~~tv~aa~~L~~~Gf~vlpyc~dd~~~ar~l~~--~G~~~vmPlg~pIGsg~Gi~~~~~I~~I~e~~~vp-- 177 (248)
T cd04728 102 DKTLLPDPIETLKAAEILVKEGFTVLPYCTDDPVLAKRLED--AGCAAVMPLGSPIGSGQGLLNPYNLRIIIERADVP-- 177 (248)
T ss_pred ccccccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHH--cCCCEeCCCCcCCCCCCCCCCHHHHHHHHHhCCCc--
Confidence 3468999999999 5799888677777788888877 67653322 45565544 5799999888765554
Q ss_pred cEEEEcC---cHhhHHHhhccCccCCCcEEEEecCCCC
Q 024375 208 RLHFVED---RLATLKNVIKEPELDGWNLYLVDWGYNT 242 (268)
Q Consensus 208 ~~~~VGD---s~~Di~aa~~~~~~agi~~i~v~wGy~~ 242 (268)
|++|= ++.|+..|.+ .|+..+.|.++...
T Consensus 178 --VI~egGI~tpeda~~Ame----lGAdgVlV~SAIt~ 209 (248)
T cd04728 178 --VIVDAGIGTPSDAAQAME----LGADAVLLNTAIAK 209 (248)
T ss_pred --EEEeCCCCCHHHHHHHHH----cCCCEEEEChHhcC
Confidence 77764 5788888887 79999999999875
No 192
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=92.54 E-value=0.24 Score=44.35 Aligned_cols=67 Identities=18% Similarity=0.131 Sum_probs=47.7
Q ss_pred CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
.|-..+.++++.+++..++++++||..+|+.+=+.+.. -+-.+|+| |-.. ..-++.+.+|+++...|
T Consensus 174 ~Kg~al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~~~-~~g~~vav--g~a~--------~~A~~~l~~~~~v~~~L 240 (266)
T PRK10187 174 NKGEAIAAFMQEAPFAGRTPVFVGDDLTDEAGFAVVNR-LGGISVKV--GTGA--------TQASWRLAGVPDVWSWL 240 (266)
T ss_pred CHHHHHHHHHHhcCCCCCeEEEEcCCccHHHHHHHHHh-cCCeEEEE--CCCC--------CcCeEeCCCHHHHHHHH
Confidence 78899999999999999999999999999887664200 12234555 4222 12357888888886655
No 193
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=92.48 E-value=0.093 Score=47.88 Aligned_cols=29 Identities=10% Similarity=0.102 Sum_probs=21.9
Q ss_pred cEEEEecCcccccChhHH---HHHHHHHHHHh
Q 024375 3 DLYALDFDGVICDSCEET---ALSAVKAARVR 31 (268)
Q Consensus 3 ~~vlFDlDGTLvDS~~~i---~~s~~~a~~~~ 31 (268)
++|+|||||||++.-..+ -..+..+++++
T Consensus 127 kvIvFDLDgTLi~~~~~v~irdPgV~EaL~~L 158 (301)
T TIGR01684 127 HVVVFDLDSTLITDEEPVRIRDPRIYDSLTEL 158 (301)
T ss_pred eEEEEecCCCCcCCCCccccCCHHHHHHHHHH
Confidence 799999999999996543 25565666666
No 194
>PLN03190 aminophospholipid translocase; Provisional
Probab=92.42 E-value=0.45 Score=51.39 Aligned_cols=34 Identities=18% Similarity=0.408 Sum_probs=28.7
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHH
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLR 171 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~ 171 (268)
.+|=||+.++++ ++|+++.++|+-..+.+..+-.
T Consensus 725 D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~ 761 (1178)
T PLN03190 725 DKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGY 761 (1178)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHH
Confidence 478899999999 7999999999977777776654
No 195
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=92.34 E-value=0.26 Score=44.08 Aligned_cols=47 Identities=26% Similarity=0.126 Sum_probs=39.1
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecC
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGL 186 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~ 186 (268)
..+|++.++|+ ++|++++|+|+++...+..++++ +|+..++-...|+
T Consensus 21 ~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~-l~l~~~~i~~nGa 70 (273)
T PRK00192 21 YSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKE-LGLEDPFIVENGA 70 (273)
T ss_pred cCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCCCEEEEcCc
Confidence 56788899988 79999999999999999999996 9988765444443
No 196
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=91.96 E-value=0.066 Score=43.75 Aligned_cols=16 Identities=31% Similarity=0.563 Sum_probs=13.6
Q ss_pred cEEEEecCcccccChh
Q 024375 3 DLYALDFDGVICDSCE 18 (268)
Q Consensus 3 ~~vlFDlDGTLvDS~~ 18 (268)
|+++|||||||+++..
T Consensus 1 k~LVlDLD~TLv~~~~ 16 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSS 16 (159)
T ss_dssp EEEEEE-CTTTEEEES
T ss_pred CEEEEeCCCcEEEEee
Confidence 6899999999999876
No 197
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=91.96 E-value=0.9 Score=40.11 Aligned_cols=59 Identities=12% Similarity=0.262 Sum_probs=42.6
Q ss_pred HHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhcCC
Q 024375 102 PVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGV 176 (268)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~--~~g~~l~IvTnK~~~~~~~~L~~~~gl 176 (268)
..|+-..|++.+++.+.-+ ...++-||+.++++ ++-.+=.|+|+.-+.+++++.. +.|+
T Consensus 61 vPFL~ahGVt~~dlrr~sE---------------~sa~lvPgA~etm~~l~~~~tp~v~STSY~qy~~r~a~-~ig~ 121 (315)
T COG4030 61 VPFLAAHGVTNRDLRRISE---------------LSAKLVPGAEETMATLQERWTPVVISTSYTQYLRRTAS-MIGV 121 (315)
T ss_pred HHHHHHhcCcHHHHHHHHH---------------hhcccCCChHHHHHHHhccCCceEEeccHHHHHHHHHH-hcCC
Confidence 3455556777666433311 12478899999999 6667788999999999999988 5777
No 198
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=91.93 E-value=0.08 Score=44.68 Aligned_cols=15 Identities=40% Similarity=0.543 Sum_probs=13.7
Q ss_pred CcEEEEecCcccccC
Q 024375 2 EDLYALDFDGVICDS 16 (268)
Q Consensus 2 ~~~vlFDlDGTLvDS 16 (268)
.++|+||+||||+|+
T Consensus 21 ikli~~D~Dgtl~~~ 35 (183)
T PRK09484 21 IRLLICDVDGVFSDG 35 (183)
T ss_pred ceEEEEcCCeeeecC
Confidence 479999999999996
No 199
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=91.73 E-value=0.12 Score=47.18 Aligned_cols=30 Identities=10% Similarity=0.078 Sum_probs=21.4
Q ss_pred CcEEEEecCcccccChhHH---HHHHHHHHHHh
Q 024375 2 EDLYALDFDGVICDSCEET---ALSAVKAARVR 31 (268)
Q Consensus 2 ~~~vlFDlDGTLvDS~~~i---~~s~~~a~~~~ 31 (268)
.++|+||+||||+++-..+ -..+-.+++++
T Consensus 128 ~~~i~~D~D~TL~~~~~~v~irdp~V~EtL~eL 160 (303)
T PHA03398 128 PHVIVFDLDSTLITDEEPVRIRDPFVYDSLDEL 160 (303)
T ss_pred ccEEEEecCCCccCCCCccccCChhHHHHHHHH
Confidence 3799999999999996654 34444455555
No 200
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=91.61 E-value=0.33 Score=42.99 Aligned_cols=48 Identities=13% Similarity=0.163 Sum_probs=40.7
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcC---CchHHHHHHHHHhcCCCCCCceEecC
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTS---NQSRFVETLLRELAGVTITPDRLYGL 186 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTn---K~~~~~~~~L~~~~gl~~~f~~i~g~ 186 (268)
..++||+.++|+ ++|+++.++|| ++...+...|++ +|++...+.|+++
T Consensus 16 ~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~-~g~~~~~~~iit~ 69 (249)
T TIGR01457 16 KERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLAS-FDIPATLETVFTA 69 (249)
T ss_pred CeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH-cCCCCChhhEeeH
Confidence 457899999998 79999999998 667888888996 9998777788865
No 201
>PLN02382 probable sucrose-phosphatase
Probab=91.60 E-value=0.29 Score=46.87 Aligned_cols=52 Identities=15% Similarity=-0.031 Sum_probs=41.9
Q ss_pred CcHHHHHHHHhcC---CCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHh
Q 024375 190 PKVNVLKQLQKKP---EHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAE 248 (268)
Q Consensus 190 pkp~~l~~~~~~l---~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~ 248 (268)
.|-..+..+++.+ |+++++++.+||+.||+++=+. +|+..|+| |-. .+++++
T Consensus 175 sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~----ag~~gvam--~NA-~~elk~ 229 (413)
T PLN02382 175 GKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSV----PDVYGVMV--SNA-QEELLQ 229 (413)
T ss_pred CHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhc----CCCCEEEE--cCC-cHHHHH
Confidence 7889999999999 9999999999999999999887 66556666 433 344554
No 202
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=91.16 E-value=0.12 Score=43.15 Aligned_cols=17 Identities=24% Similarity=0.470 Sum_probs=14.5
Q ss_pred CcEEEEecCcccccChh
Q 024375 2 EDLYALDFDGVICDSCE 18 (268)
Q Consensus 2 ~~~vlFDlDGTLvDS~~ 18 (268)
.++++||+||||+++-.
T Consensus 13 ~k~~~~D~Dgtl~~~~~ 29 (166)
T TIGR01664 13 SKVAAFDLDGTLITTRS 29 (166)
T ss_pred CcEEEEeCCCceEecCC
Confidence 58999999999998653
No 203
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=91.08 E-value=1 Score=47.52 Aligned_cols=91 Identities=12% Similarity=0.217 Sum_probs=65.6
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCc--eEe-cCC-CC---------------------
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPD--RLY-GLG-TG--------------------- 189 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~--~i~-g~~-~~--------------------- 189 (268)
.+|-|++.++++ ++|+++.++|+-....|..+-++ .|+..--. .++ |.+ ..
T Consensus 546 Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~-~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP 624 (917)
T COG0474 546 DPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKE-CGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSP 624 (917)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHH-cCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCH
Confidence 478899999999 89999999999999999999996 99865432 243 543 10
Q ss_pred -CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCC
Q 024375 190 -PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGY 240 (268)
Q Consensus 190 -pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy 240 (268)
.|-.+++ ++++.| .-+.|+||..||+-|=|. |. |||.-|-
T Consensus 625 ~qK~~IV~-~lq~~g---~vVamtGDGvNDapALk~----AD---VGIamg~ 665 (917)
T COG0474 625 EQKARIVE-ALQKSG---HVVAMTGDGVNDAPALKA----AD---VGIAMGG 665 (917)
T ss_pred HHHHHHHH-HHHhCC---CEEEEeCCCchhHHHHHh----cC---ccEEecc
Confidence 1223333 333333 458999999999999888 44 5665554
No 204
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=90.56 E-value=0.12 Score=42.24 Aligned_cols=14 Identities=50% Similarity=0.805 Sum_probs=12.9
Q ss_pred cEEEEecCcccccC
Q 024375 3 DLYALDFDGVICDS 16 (268)
Q Consensus 3 ~~vlFDlDGTLvDS 16 (268)
++|+||+||||+|.
T Consensus 2 ~~~~~D~Dgtl~~~ 15 (154)
T TIGR01670 2 RLLILDVDGVLTDG 15 (154)
T ss_pred eEEEEeCceeEEcC
Confidence 78999999999985
No 205
>PRK00208 thiG thiazole synthase; Reviewed
Probab=90.55 E-value=10 Score=33.83 Aligned_cols=95 Identities=15% Similarity=0.175 Sum_probs=71.1
Q ss_pred CCCCccHHHHHH------hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCc--eEecCCCC-CcHHHHHHHHhcCCCCCCc
Q 024375 138 NRLYPGVSDALK------LASSRIYIVTSNQSRFVETLLRELAGVTITPD--RLYGLGTG-PKVNVLKQLQKKPEHQGLR 208 (268)
Q Consensus 138 ~~lypGv~e~L~------~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~--~i~g~~~~-pkp~~l~~~~~~l~~~~~~ 208 (268)
-.++|.+.++++ +.|+.+.-+++.....++++.+ +|-+...- .-||+..+ .+|+.+..+.+..+++
T Consensus 103 ~~llpd~~~tv~aa~~L~~~Gf~vlpyc~~d~~~ak~l~~--~G~~~vmPlg~pIGsg~gi~~~~~i~~i~e~~~vp--- 177 (250)
T PRK00208 103 KTLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLAKRLEE--AGCAAVMPLGAPIGSGLGLLNPYNLRIIIEQADVP--- 177 (250)
T ss_pred CCCCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHH--cCCCEeCCCCcCCCCCCCCCCHHHHHHHHHhcCCe---
Confidence 468999999999 5699888566666777877776 67654322 55665544 5799988888765554
Q ss_pred EEEEcC---cHhhHHHhhccCccCCCcEEEEecCCCC
Q 024375 209 LHFVED---RLATLKNVIKEPELDGWNLYLVDWGYNT 242 (268)
Q Consensus 209 ~~~VGD---s~~Di~aa~~~~~~agi~~i~v~wGy~~ 242 (268)
|++|= ++.|+..|.+ .|+..+.|.+|...
T Consensus 178 -VIveaGI~tpeda~~Ame----lGAdgVlV~SAItk 209 (250)
T PRK00208 178 -VIVDAGIGTPSDAAQAME----LGADAVLLNTAIAV 209 (250)
T ss_pred -EEEeCCCCCHHHHHHHHH----cCCCEEEEChHhhC
Confidence 77774 4678888887 79999999999875
No 206
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=90.54 E-value=0.17 Score=45.43 Aligned_cols=46 Identities=9% Similarity=-0.021 Sum_probs=25.9
Q ss_pred HHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEEEcCc
Q 024375 164 RFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDR 215 (268)
Q Consensus 164 ~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~VGDs 215 (268)
..+++++++ +|+..-.-..+| |...+-+++..+-+-.+ -.+-||.+
T Consensus 177 ~al~~ll~~-~~~~~~~v~~~G-D~~nD~~mf~~~~~~~g----~~vavg~a 222 (266)
T PRK10187 177 EAIAAFMQE-APFAGRTPVFVG-DDLTDEAGFAVVNRLGG----ISVKVGTG 222 (266)
T ss_pred HHHHHHHHh-cCCCCCeEEEEc-CCccHHHHHHHHHhcCC----eEEEECCC
Confidence 456778884 887643333334 44466777776632112 33677755
No 207
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=90.44 E-value=1.3 Score=47.35 Aligned_cols=38 Identities=16% Similarity=0.341 Sum_probs=31.2
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCC
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGV 176 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl 176 (268)
-+|=.||.|+++ ++|+|+.|.|+-..+.|..+.-. .++
T Consensus 650 DkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~s-C~L 690 (1151)
T KOG0206|consen 650 DKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYS-CRL 690 (1151)
T ss_pred chhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHh-hcC
Confidence 478899999998 89999999999888888777654 444
No 208
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=89.76 E-value=0.33 Score=43.25 Aligned_cols=47 Identities=26% Similarity=0.357 Sum_probs=36.4
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHH---HHHHHHHhcCCCCCCceEecC
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSNQSRF---VETLLRELAGVTITPDRLYGL 186 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK~~~~---~~~~L~~~~gl~~~f~~i~g~ 186 (268)
.++||+.+.|+ ++|++++++||.+... ....|+. +|++.-.+.|+++
T Consensus 21 ~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~-~g~~~~~~~i~ts 73 (257)
T TIGR01458 21 VAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQR-LGFDISEDEVFTP 73 (257)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHH-cCCCCCHHHeEcH
Confidence 37999999998 7999999999966654 6666775 8887555666653
No 209
>PRK10444 UMP phosphatase; Provisional
Probab=89.71 E-value=0.84 Score=40.53 Aligned_cols=47 Identities=21% Similarity=0.302 Sum_probs=36.0
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHH---HHHhcCCCCCCceEecC
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETL---LRELAGVTITPDRLYGL 186 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~---L~~~~gl~~~f~~i~g~ 186 (268)
.++||+.++|+ ++|+++.++||.+......+ |+. +|++.-.+.|+++
T Consensus 17 ~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~-~G~~~~~~~i~ts 69 (248)
T PRK10444 17 VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFAT-AGVDVPDSVFYTS 69 (248)
T ss_pred eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH-cCCCCCHhhEecH
Confidence 78999999998 79999999999887655444 443 6776555666654
No 210
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=88.47 E-value=2.4 Score=45.48 Aligned_cols=39 Identities=28% Similarity=0.423 Sum_probs=35.9
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCC
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVT 177 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~ 177 (268)
.++-|++.++++ ++|+++.++|+-....+..+-++ .|+-
T Consensus 655 d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~-~gii 696 (1054)
T TIGR01657 655 NPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARE-CGIV 696 (1054)
T ss_pred cCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCC
Confidence 478899999999 79999999999999999999996 9984
No 211
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=88.32 E-value=0.24 Score=43.63 Aligned_cols=33 Identities=12% Similarity=0.101 Sum_probs=21.4
Q ss_pred HHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHH
Q 024375 164 RFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQL 198 (268)
Q Consensus 164 ~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~ 198 (268)
..++.++++ +++..-.-..+| |...+.+++..+
T Consensus 170 ~a~~~~~~~-~~~~~~~~i~iG-D~~~D~~~~~~~ 202 (244)
T TIGR00685 170 EIVKRLLWH-QPGSGISPVYLG-DDITDEDAFRVV 202 (244)
T ss_pred HHHHHHHHh-cccCCCceEEEc-CCCcHHHHHHHH
Confidence 567788885 887654344444 445677777766
No 212
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=88.25 E-value=0.24 Score=41.07 Aligned_cols=16 Identities=19% Similarity=0.416 Sum_probs=12.0
Q ss_pred cEEEEecCcccccChh
Q 024375 3 DLYALDFDGVICDSCE 18 (268)
Q Consensus 3 ~~vlFDlDGTLvDS~~ 18 (268)
|.+.||+||||+-+-.
T Consensus 1 Kia~fD~DgTLi~~~s 16 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKS 16 (159)
T ss_dssp SEEEE-SCTTTEE-ST
T ss_pred CEEEEeCCCCccCCCC
Confidence 5789999999998864
No 213
>TIGR01658 EYA-cons_domain eyes absent protein conserved domain. This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.
Probab=87.91 E-value=2.9 Score=37.30 Aligned_cols=81 Identities=11% Similarity=0.148 Sum_probs=61.2
Q ss_pred CcEEEEcCCchHHHHHHHHHhcCCCCCC--ceEecCCCCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCC
Q 024375 153 SRIYIVTSNQSRFVETLLRELAGVTITP--DRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDG 230 (268)
Q Consensus 153 ~~l~IvTnK~~~~~~~~L~~~~gl~~~f--~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~ag 230 (268)
+.+.|-|+.--+.+-++|- +||+.+| +-|+.+..-.|...++.+.+++|-+...-+.|||+.---++|+. -+
T Consensus 177 vNvLVTs~qLVPaLaKcLL--y~L~~~f~ieNIYSa~kvGK~~cFe~I~~Rfg~p~~~f~~IGDG~eEe~aAk~----l~ 250 (274)
T TIGR01658 177 INVLVTSGQLIPSLAKCLL--FRLDTIFRIENVYSSIKVGKLQCFKWIKERFGHPKVRFCAIGDGWEECTAAQA----MN 250 (274)
T ss_pred eEEEEEcCccHHHHHHHHH--hccCCccccccccchhhcchHHHHHHHHHHhCCCCceEEEeCCChhHHHHHHh----cC
Confidence 4444444555556666664 7888776 56666554488999999999999988899999999998899998 78
Q ss_pred CcEEEEecC
Q 024375 231 WNLYLVDWG 239 (268)
Q Consensus 231 i~~i~v~wG 239 (268)
+|++=+.-.
T Consensus 251 wPFw~I~~h 259 (274)
T TIGR01658 251 WPFVKIDLH 259 (274)
T ss_pred CCeEEeecC
Confidence 888777543
No 214
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=87.87 E-value=2.3 Score=37.26 Aligned_cols=49 Identities=24% Similarity=0.432 Sum_probs=35.0
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCc---hHHHHHHHHHhcCCCCCCceEecC
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQ---SRFVETLLRELAGVTITPDRLYGL 186 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~---~~~~~~~L~~~~gl~~~f~~i~g~ 186 (268)
..+|||+.+.|. ++|+++.++||.+ .....+.|.+++|+..-++.|+.+
T Consensus 13 ~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~~~~iits 67 (236)
T TIGR01460 13 HKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVSPDQIITS 67 (236)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCHHHeeeH
Confidence 468999999998 6899999999644 444444444347877666767654
No 215
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=86.79 E-value=1.7 Score=42.67 Aligned_cols=107 Identities=14% Similarity=0.166 Sum_probs=68.7
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEEEcCc
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDR 215 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~VGDs 215 (268)
...||++|-.. +-|++...+|.-.+-.+..+-++ -|++.|... .+|+-=.++.++-+....=+.|.||.
T Consensus 447 ivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~E-AGVDdfiAe-------atPEdK~~~I~~eQ~~grlVAMtGDG 518 (681)
T COG2216 447 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAE-AGVDDFIAE-------ATPEDKLALIRQEQAEGRLVAMTGDG 518 (681)
T ss_pred hcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHH-hCchhhhhc-------CChHHHHHHHHHHHhcCcEEEEcCCC
Confidence 46799999887 79999999999999999999996 999865432 13432223333333333447899999
Q ss_pred HhhHHHhhccCccCCCcEEEEecCCCCHHHH---HhcCCCCCeeec
Q 024375 216 LATLKNVIKEPELDGWNLYLVDWGYNTPKER---AEAASMPRIQLL 258 (268)
Q Consensus 216 ~~Di~aa~~~~~~agi~~i~v~wGy~~~~el---~~~~~~P~~~~~ 258 (268)
.||.-+-.++ .+- ++..-|-....|- -+...+|.-+++
T Consensus 519 TNDAPALAqA----dVg-~AMNsGTqAAkEAaNMVDLDS~PTKlie 559 (681)
T COG2216 519 TNDAPALAQA----DVG-VAMNSGTQAAKEAANMVDLDSNPTKLIE 559 (681)
T ss_pred CCcchhhhhc----chh-hhhccccHHHHHhhcccccCCCccceeh
Confidence 9998765552 211 3444554333332 234556765554
No 216
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=86.53 E-value=0.41 Score=38.86 Aligned_cols=17 Identities=24% Similarity=0.401 Sum_probs=14.8
Q ss_pred CcEEEEecCcccccChh
Q 024375 2 EDLYALDFDGVICDSCE 18 (268)
Q Consensus 2 ~~~vlFDlDGTLvDS~~ 18 (268)
+.++++||||||++|..
T Consensus 2 k~~lvldld~tl~~~~~ 18 (148)
T smart00577 2 KKTLVLDLDETLVHSTH 18 (148)
T ss_pred CcEEEEeCCCCeECCCC
Confidence 36899999999999965
No 217
>KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=86.53 E-value=0.68 Score=43.26 Aligned_cols=69 Identities=19% Similarity=0.250 Sum_probs=48.6
Q ss_pred hCCCcEEEEcCCchHHHHHHHHHhcC--CCCCCceEecCCCC-------CcH---------------------------H
Q 024375 150 LASSRIYIVTSNQSRFVETLLRELAG--VTITPDRLYGLGTG-------PKV---------------------------N 193 (268)
Q Consensus 150 ~~g~~l~IvTnK~~~~~~~~L~~~~g--l~~~f~~i~g~~~~-------pkp---------------------------~ 193 (268)
+.|.+|.++||.|-.++..-+....| |..+||+||-.-.| .+| -
T Consensus 254 ~~GKklFLiTNSPysFVd~GM~flvG~~WRdlFDVVIvqA~KP~Fftde~rPfR~~dek~~sl~wdkv~klekgkiYy~G 333 (510)
T KOG2470|consen 254 DHGKKLFLITNSPYSFVDKGMRFLVGDDWRDLFDVVIVQANKPEFFTDERRPFRKYDEKRGSLLWDKVDKLEKGKIYYQG 333 (510)
T ss_pred HhcCcEEEEeCCchhhhhcCceeeeCccHHhhhheeEEecCCCcccccccCcchhhcccccchhhhhhhhcccCceeeec
Confidence 68999999999999999988873123 45789998853211 112 1
Q ss_pred HHHHHHhcCCCCCCcEEEEcCcHhh
Q 024375 194 VLKQLQKKPEHQGLRLHFVEDRLAT 218 (268)
Q Consensus 194 ~l~~~~~~l~~~~~~~~~VGDs~~D 218 (268)
-+...++-.|....+++|+||..+-
T Consensus 334 ~l~~flelt~WrG~~VlYFGDHlyS 358 (510)
T KOG2470|consen 334 NLKSFLELTGWRGPRVLYFGDHLYS 358 (510)
T ss_pred cHHHHHHHhccCCCeeEEecCcchh
Confidence 2445555556777899999999753
No 218
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=86.34 E-value=1.5 Score=39.30 Aligned_cols=76 Identities=26% Similarity=0.257 Sum_probs=50.4
Q ss_pred CCCcEEEEcCCchHHHHHH---HHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCc
Q 024375 151 ASSRIYIVTSNQSRFVETL---LRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPE 227 (268)
Q Consensus 151 ~g~~l~IvTnK~~~~~~~~---L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~ 227 (268)
.-++++|||..+...-+++ |+. .|+..--....|+- +|..++..+ + |+ +|+.|....++.|..
T Consensus 185 ~piRtalVTAR~apah~RvI~TLr~-Wgv~vDEafFLgG~--~K~~vL~~~----~--ph--IFFDDQ~~H~~~a~~--- 250 (264)
T PF06189_consen 185 SPIRTALVTARSAPAHERVIRTLRS-WGVRVDEAFFLGGL--PKGPVLKAF----R--PH--IFFDDQDGHLESASK--- 250 (264)
T ss_pred CceEEEEEEcCCCchhHHHHHHHHH-cCCcHhHHHHhCCC--chhHHHHhh----C--CC--EeecCchhhhhHhhc---
Confidence 5688999997766554444 553 56542211222322 565555443 2 33 999999999999984
Q ss_pred cCCCcEEEEecCCCC
Q 024375 228 LDGWNLYLVDWGYNT 242 (268)
Q Consensus 228 ~agi~~i~v~wGy~~ 242 (268)
++|++-|.||-.+
T Consensus 251 --~vps~hVP~gv~n 263 (264)
T PF06189_consen 251 --VVPSGHVPYGVAN 263 (264)
T ss_pred --CCCEEeccCCcCC
Confidence 8999999999653
No 219
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=85.90 E-value=0.4 Score=36.51 Aligned_cols=19 Identities=26% Similarity=0.525 Sum_probs=14.4
Q ss_pred EEEecCcccccChhHHHHH
Q 024375 5 YALDFDGVICDSCEETALS 23 (268)
Q Consensus 5 vlFDlDGTLvDS~~~i~~s 23 (268)
++||+||||.+.-..+-.|
T Consensus 1 ~l~D~dGvl~~g~~~ipga 19 (101)
T PF13344_consen 1 FLFDLDGVLYNGNEPIPGA 19 (101)
T ss_dssp EEEESTTTSEETTEE-TTH
T ss_pred CEEeCccEeEeCCCcCcCH
Confidence 6899999999977654444
No 220
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=85.65 E-value=3.1 Score=35.75 Aligned_cols=91 Identities=15% Similarity=0.137 Sum_probs=58.8
Q ss_pred ccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhcCCCCC----CceEecCC---------CCCc-HHHHHHHHhcCCC-
Q 024375 142 PGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTIT----PDRLYGLG---------TGPK-VNVLKQLQKKPEH- 204 (268)
Q Consensus 142 pGv~e~L~--~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~----f~~i~g~~---------~~pk-p~~l~~~~~~l~~- 204 (268)
||+.++|+ .+.+.++|-|+.....++.++.. +|+... ...+.... .++. -..+..+.++++.
T Consensus 48 P~l~eFL~~~~~~feIvVwTAa~~~ya~~~l~~-l~~~~~~~~~i~~~ld~~~~~~~~~~~~g~~~vKdL~~lw~~l~~~ 126 (195)
T TIGR02245 48 PYLHEFLTSAYEDYDIVIWSATSMKWIEIKMTE-LGVLTNPNYKITFLLDSTAMITVHTPRRGKFDVKPLGVIWALLPEF 126 (195)
T ss_pred CCHHHHHHHHHhCCEEEEEecCCHHHHHHHHHH-hcccCCccceEEEEeccccceeeEeeccCcEEEeecHHhhhhcccC
Confidence 89999999 78999999999999999999995 876321 11122111 1110 1123334344542
Q ss_pred -CCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecC
Q 024375 205 -QGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWG 239 (268)
Q Consensus 205 -~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wG 239 (268)
+.+++++|.|++.-...-=. +|+++- .|-
T Consensus 127 ~~~~ntiiVDd~p~~~~~~P~----N~i~I~--~f~ 156 (195)
T TIGR02245 127 YSMKNTIMFDDLRRNFLMNPQ----NGLKIR--PFK 156 (195)
T ss_pred CCcccEEEEeCCHHHHhcCCC----CccccC--Ccc
Confidence 67899999999887653222 466664 453
No 221
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=85.51 E-value=2.8 Score=43.41 Aligned_cols=99 Identities=20% Similarity=0.289 Sum_probs=69.0
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCc----eEe-cCCC-------------------C--
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPD----RLY-GLGT-------------------G-- 189 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~----~i~-g~~~-------------------~-- 189 (268)
+|=|+|.+.++ +.|+++-++|+-....++.+.++ .|+-..-+ ..+ |.+- +
T Consensus 584 PPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~-iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~ 662 (972)
T KOG0202|consen 584 PPRPEVADAIELCRQAGIRVIMITGDNKETAEAIARE-IGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARAE 662 (972)
T ss_pred CCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH-hCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEecC
Confidence 67789999888 89999999999999999999996 99865444 222 2220 0
Q ss_pred --CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhc
Q 024375 190 --PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEA 249 (268)
Q Consensus 190 --pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~ 249 (268)
+|-++++.+ + -..+=+.|-||..||.-|-|.| . ||+.-|-...+--+++
T Consensus 663 P~HK~kIVeaL-q---~~geivAMTGDGVNDApALK~A----d---IGIAMG~~GTdVaKeA 713 (972)
T KOG0202|consen 663 PQHKLKIVEAL-Q---SRGEVVAMTGDGVNDAPALKKA----D---IGIAMGISGTDVAKEA 713 (972)
T ss_pred chhHHHHHHHH-H---hcCCEEEecCCCccchhhhhhc----c---cceeecCCccHhhHhh
Confidence 223334333 3 2334478999999999998883 2 8888895544444443
No 222
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=85.43 E-value=0.47 Score=39.85 Aligned_cols=16 Identities=19% Similarity=0.270 Sum_probs=11.4
Q ss_pred CcEEEEecCcccccCh
Q 024375 2 EDLYALDFDGVICDSC 17 (268)
Q Consensus 2 ~~~vlFDlDGTLvDS~ 17 (268)
.++|+||||+||-+--
T Consensus 3 PklvvFDLD~TlW~~~ 18 (169)
T PF12689_consen 3 PKLVVFDLDYTLWPPW 18 (169)
T ss_dssp -SEEEE-STTTSSSS-
T ss_pred CcEEEEcCcCCCCchh
Confidence 3799999999997643
No 223
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=85.09 E-value=0.44 Score=39.96 Aligned_cols=15 Identities=47% Similarity=0.689 Sum_probs=13.7
Q ss_pred cEEEEecCcccccCh
Q 024375 3 DLYALDFDGVICDSC 17 (268)
Q Consensus 3 ~~vlFDlDGTLvDS~ 17 (268)
++++||+||||-|..
T Consensus 8 ~~~v~d~dGv~tdg~ 22 (169)
T TIGR02726 8 KLVILDVDGVMTDGR 22 (169)
T ss_pred eEEEEeCceeeECCe
Confidence 699999999999974
No 224
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=83.10 E-value=11 Score=33.60 Aligned_cols=151 Identities=19% Similarity=0.195 Sum_probs=79.0
Q ss_pred hhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHH
Q 024375 95 ENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLR 171 (268)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~ 171 (268)
..|-.....++-..+++.+++.+.+... ...+=+|+.++++ ++++|+.|.|.--...++.+|+
T Consensus 60 ~EWw~kah~llv~~~l~k~~i~~~V~~s--------------~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~ 125 (246)
T PF05822_consen 60 EEWWTKAHELLVEQGLTKSEIEEAVKES--------------DIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLR 125 (246)
T ss_dssp HHHHHHHHHHHHHHT-BGGGHHHHHHCS-----------------B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCcCHHHHHHHHHhc--------------chhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHH
Confidence 3343444555566677766666665521 2456688998888 8999999999999999999999
Q ss_pred HhcCCCCC----------C---ceEecC-CC----CCcHHHHHH---HHhcCCCCCCcEEEEcCcHhhHHHhhccCccCC
Q 024375 172 ELAGVTIT----------P---DRLYGL-GT----GPKVNVLKQ---LQKKPEHQGLRLHFVEDRLATLKNVIKEPELDG 230 (268)
Q Consensus 172 ~~~gl~~~----------f---~~i~g~-~~----~pkp~~l~~---~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~ag 230 (268)
+ .|.... | ..+.|- +. -.|-+.... ..+++ -...+++..|||..|+.+|.... ..
T Consensus 126 q-~~~~~~Nv~VvSN~M~Fd~~g~l~gF~~~lIH~~NKn~~~l~~~~~~~~~-~~R~NvlLlGDslgD~~Ma~G~~--~~ 201 (246)
T PF05822_consen 126 Q-AGVFHPNVKVVSNFMDFDEDGVLVGFKGPLIHTFNKNESALEDSPYFKQL-KKRTNVLLLGDSLGDLHMADGVP--DE 201 (246)
T ss_dssp H-TT--BTTEEEEEE-EEE-TTSBEEEE-SS---TT-HHHHHHTTHHHHHCT-TT--EEEEEESSSGGGGTTTT-S----
T ss_pred H-cCCCCCCeEEEeeeEEECCcceEeecCCCceEEeeCCcccccCchHHHHh-ccCCcEEEecCccCChHhhcCCC--cc
Confidence 7 665321 1 123331 10 033332221 12222 23568999999999999987531 11
Q ss_pred CcEEEEecCCCCHHH-HHhcCCCCCeeecChhHH
Q 024375 231 WNLYLVDWGYNTPKE-RAEAASMPRIQLLQLSDF 263 (268)
Q Consensus 231 i~~i~v~wGy~~~~e-l~~~~~~P~~~~~~~~~~ 263 (268)
-.++-+.+=....++ +..+...=|+++.+=+.+
T Consensus 202 ~~~lkIGFLn~~ve~~l~~Y~~~yDIVlv~D~tm 235 (246)
T PF05822_consen 202 ENVLKIGFLNDKVEENLEKYLEAYDIVLVDDQTM 235 (246)
T ss_dssp SEEEEEEEE-SSHHHHHHHHHCCSSEEEET--B-
T ss_pred ccEEEEEecccCHHHHHHHHHhcCCEEEECCCCc
Confidence 122223222234443 555554557777665544
No 225
>PLN03017 trehalose-phosphatase
Probab=82.66 E-value=0.84 Score=43.01 Aligned_cols=70 Identities=13% Similarity=-0.038 Sum_probs=42.7
Q ss_pred CcHHHHHHHHhcCCCCC---CcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhh
Q 024375 190 PKVNVLKQLQKKPEHQG---LRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTK 266 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~~---~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~ 266 (268)
.|-..++.+++.++... .-.+||||-.+|-.+=+.......--.|.| |-...+ ..-+|.+.+++++...
T Consensus 283 dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~V--G~~~k~------T~A~y~L~dp~eV~~f 354 (366)
T PLN03017 283 DKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILV--SKFPKD------TDASYSLQDPSEVMDF 354 (366)
T ss_pred CHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEE--CCCCCC------CcceEeCCCHHHHHHH
Confidence 57789999999887653 247999999999666443210010122334 422111 1234888999988766
Q ss_pred c
Q 024375 267 L 267 (268)
Q Consensus 267 ~ 267 (268)
|
T Consensus 355 L 355 (366)
T PLN03017 355 L 355 (366)
T ss_pred H
Confidence 5
No 226
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=82.47 E-value=0.73 Score=39.62 Aligned_cols=15 Identities=33% Similarity=0.430 Sum_probs=13.5
Q ss_pred cEEEEecCcccccCh
Q 024375 3 DLYALDFDGVICDSC 17 (268)
Q Consensus 3 ~~vlFDlDGTLvDS~ 17 (268)
++++.||||||+|+.
T Consensus 22 klLVLDLDeTLvh~~ 36 (195)
T TIGR02245 22 KLLVLDIDYTLFDHR 36 (195)
T ss_pred cEEEEeCCCceEccc
Confidence 699999999999864
No 227
>PLN02151 trehalose-phosphatase
Probab=82.01 E-value=0.9 Score=42.62 Aligned_cols=69 Identities=13% Similarity=0.013 Sum_probs=42.0
Q ss_pred CcHHHHHHHHhcCCCCCC---cEEEEcCcHhhHHHhhccCc-cCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhh
Q 024375 190 PKVNVLKQLQKKPEHQGL---RLHFVEDRLATLKNVIKEPE-LDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCT 265 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~~~---~~~~VGDs~~Di~aa~~~~~-~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~ 265 (268)
.|-..+..+++.++.... -.+||||-.+|-.+=+.... ..|+ .|.| |.+.. ...-+|.+.+++++..
T Consensus 269 dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~-gI~V--g~~~k------~T~A~y~L~dp~eV~~ 339 (354)
T PLN02151 269 DKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGL-GILV--SKYAK------ETNASYSLQEPDEVME 339 (354)
T ss_pred CHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCc-cEEe--ccCCC------CCcceEeCCCHHHHHH
Confidence 577889999998875432 27999999999666443110 0132 2233 32211 1123588999998876
Q ss_pred hc
Q 024375 266 KL 267 (268)
Q Consensus 266 ~~ 267 (268)
.|
T Consensus 340 ~L 341 (354)
T PLN02151 340 FL 341 (354)
T ss_pred HH
Confidence 55
No 228
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=81.93 E-value=0.79 Score=38.10 Aligned_cols=18 Identities=39% Similarity=0.447 Sum_probs=15.4
Q ss_pred CCcEEEEecCcccccChh
Q 024375 1 MEDLYALDFDGVICDSCE 18 (268)
Q Consensus 1 m~~~vlFDlDGTLvDS~~ 18 (268)
|.++++||.||||.|..-
T Consensus 7 ~IkLli~DVDGvLTDG~l 24 (170)
T COG1778 7 NIKLLILDVDGVLTDGKL 24 (170)
T ss_pred hceEEEEeccceeecCeE
Confidence 458999999999999863
No 229
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=81.40 E-value=0.79 Score=38.12 Aligned_cols=14 Identities=36% Similarity=0.287 Sum_probs=12.1
Q ss_pred cEEEEecCcccccC
Q 024375 3 DLYALDFDGVICDS 16 (268)
Q Consensus 3 ~~vlFDlDGTLvDS 16 (268)
++++||.||||+..
T Consensus 2 ~~~~~D~Dgtl~~~ 15 (176)
T TIGR00213 2 KAIFLDRDGTINID 15 (176)
T ss_pred CEEEEeCCCCEeCC
Confidence 68999999999953
No 230
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=81.36 E-value=0.81 Score=41.27 Aligned_cols=99 Identities=15% Similarity=0.081 Sum_probs=53.9
Q ss_pred CCCccHHHHHHhCCCcEEEEcCC--chHHHHHHHHH-hcCCCCC-CceEecCC------CC-CcHHHHHHHHhcCCCCCC
Q 024375 139 RLYPGVSDALKLASSRIYIVTSN--QSRFVETLLRE-LAGVTIT-PDRLYGLG------TG-PKVNVLKQLQKKPEHQGL 207 (268)
Q Consensus 139 ~lypGv~e~L~~~g~~l~IvTnK--~~~~~~~~L~~-~~gl~~~-f~~i~g~~------~~-pkp~~l~~~~~~l~~~~~ 207 (268)
.-+||+. ++.+|.-+++-+-+ +.+.....+.. ...+... .....|.. .+ .|-..+..+++++.....
T Consensus 122 ~r~pGs~--iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~~~~~~~~v~~gk~vVEvrp~~~~KG~a~~~i~~~~~~~~~ 199 (266)
T COG1877 122 ERTPGSY--IERKGFAVALHYRNAEDDEGAALALAEAATLINELKLRVTPGKMVVELRPPGVSKGAAIKYIMDELPFDGR 199 (266)
T ss_pred hcCCCeE--EEEcCcEEEEeeccCCchhhHHHHHHHHHhccccccEEEEeCceEEEEeeCCcchHHHHHHHHhcCCCCCC
Confidence 4467643 23577777776632 22222222221 1233323 23333543 12 688889999988776665
Q ss_pred cEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCC
Q 024375 208 RLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNT 242 (268)
Q Consensus 208 ~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~ 242 (268)
-.++.||-..|=.+=... .+...+.|.=|.++
T Consensus 200 ~~~~aGDD~TDE~~F~~v---~~~~~~~v~v~~~~ 231 (266)
T COG1877 200 FPIFAGDDLTDEDAFAAV---NKLDSITVKVGVGS 231 (266)
T ss_pred cceecCCCCccHHHHHhh---ccCCCceEEecCCc
Confidence 689999999986543331 33334555555553
No 231
>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=81.10 E-value=3.2 Score=39.50 Aligned_cols=84 Identities=14% Similarity=0.163 Sum_probs=58.5
Q ss_pred hCCCcEEEEcCCchHHHHHHHHHhcC--CCCCCceEecCCCC----------------------------------CcHH
Q 024375 150 LASSRIYIVTSNQSRFVETLLRELAG--VTITPDRLYGLGTG----------------------------------PKVN 193 (268)
Q Consensus 150 ~~g~~l~IvTnK~~~~~~~~L~~~~g--l~~~f~~i~g~~~~----------------------------------pkp~ 193 (268)
+.|.++.++||..-.++...+..++| +..||+.|+....| +.+-
T Consensus 212 ~sGKk~fl~Tns~~~ytd~~mt~~~~~dW~~yfd~v~~~a~Kp~ff~e~~vlreV~t~~g~l~~g~~~~p~e~~~~ySgg 291 (424)
T KOG2469|consen 212 DSGKKTFLHTNSDWDYTDIFMAFHYGFDWETYFDLVETRAAKPGFFHEGTVLREVEPQEGLLKNGDNTGPLEQGGVYSGG 291 (424)
T ss_pred hhccceEEeeccccchhhHHHHHHhCCCcceeEEEEEEeccCCccccccceeeeeccccccccccccCCcchhcccCCcc
Confidence 89999999999999999999997665 66789887743111 1123
Q ss_pred HHHHHHhcCCCCCCcEEEEcCcHh-hHHHhhccCccCCCcEEEE
Q 024375 194 VLKQLQKKPEHQGLRLHFVEDRLA-TLKNVIKEPELDGWNLYLV 236 (268)
Q Consensus 194 ~l~~~~~~l~~~~~~~~~VGDs~~-Di~aa~~~~~~agi~~i~v 236 (268)
....+++.++....+++||||... ||.-.++ .-|-+++.|
T Consensus 292 s~~~~~~~l~~~g~diLy~gdHi~~dvl~skk---~~~wrt~lv 332 (424)
T KOG2469|consen 292 SLKTVETSMKVKGKDILYGGDHIWGDVLVSKK---RRGWRTVLV 332 (424)
T ss_pred hHHHHHHHhcccccceeecccceeeeEEecce---ecceEEEEE
Confidence 455556666666688999999864 5555443 245555555
No 232
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=80.74 E-value=6.6 Score=38.35 Aligned_cols=69 Identities=17% Similarity=0.253 Sum_probs=59.2
Q ss_pred hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC------C--CCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHH
Q 024375 150 LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG------T--GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKN 221 (268)
Q Consensus 150 ~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~------~--~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~a 221 (268)
++|+-++|+|-....-++.+.++ + .+.|.-.+ . .||.+-++++++++++..+..+||.|++.-.+-
T Consensus 269 kqGVlLav~SKN~~~da~evF~k-h-----p~MiLkeedfa~~~iNW~~K~eNirkIAkklNlg~dSmvFiDD~p~ErE~ 342 (574)
T COG3882 269 KQGVLLAVCSKNTEKDAKEVFRK-H-----PDMILKEEDFAVFQINWDPKAENIRKIAKKLNLGLDSMVFIDDNPAEREL 342 (574)
T ss_pred hccEEEEEecCCchhhHHHHHhh-C-----CCeEeeHhhhhhheecCCcchhhHHHHHHHhCCCccceEEecCCHHHHHH
Confidence 79999999999999999998886 2 34555543 1 299999999999999999999999999999999
Q ss_pred hhc
Q 024375 222 VIK 224 (268)
Q Consensus 222 a~~ 224 (268)
-++
T Consensus 343 vk~ 345 (574)
T COG3882 343 VKR 345 (574)
T ss_pred HHh
Confidence 997
No 233
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=80.62 E-value=0.97 Score=46.34 Aligned_cols=64 Identities=14% Similarity=-0.029 Sum_probs=45.0
Q ss_pred CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
.|-..+..+++ +.+++.++++||+.+|+.+-+. ++-..++|.=|-. ...-++.+.+++++...|
T Consensus 657 nKG~al~~ll~--~~~~d~vl~~GD~~nDe~Mf~~----~~~~~~~v~vG~~--------~s~A~~~l~~~~eV~~~L 720 (726)
T PRK14501 657 NKGRAVRRLLE--AGPYDFVLAIGDDTTDEDMFRA----LPETAITVKVGPG--------ESRARYRLPSQREVRELL 720 (726)
T ss_pred CHHHHHHHHHh--cCCCCEEEEECCCCChHHHHHh----cccCceEEEECCC--------CCcceEeCCCHHHHHHHH
Confidence 78889999988 6788899999999999999886 2211233433431 123358888888876655
No 234
>PRK11840 bifunctional sulfur carrier protein/thiazole synthase protein; Provisional
Probab=80.38 E-value=20 Score=33.24 Aligned_cols=121 Identities=15% Similarity=0.141 Sum_probs=82.9
Q ss_pred CHHHHHHHHHHHHHHhhhccc--cccccCCCCCccHHHHHH------hCCCcEEEEcCCchHHHHHHHHHhcCCCC--CC
Q 024375 111 NREALIELSGKVRDEWMDTDF--TTWIGANRLYPGVSDALK------LASSRIYIVTSNQSRFVETLLRELAGVTI--TP 180 (268)
Q Consensus 111 ~~~~~~~~~~~~r~~~~~~~~--~~~~~~~~lypGv~e~L~------~~g~~l~IvTnK~~~~~~~~L~~~~gl~~--~f 180 (268)
+.++.-....--|+.....+. +-.-+.-.++|.+.++++ ++|+.+.++++.....++++.+ +|-.- ..
T Consensus 148 ta~eAv~~a~lare~~~~~~iKlEvi~e~~~llpd~~~~v~aa~~L~~~Gf~v~~yc~~d~~~a~~l~~--~g~~avmPl 225 (326)
T PRK11840 148 TAEEAVRTLRLAREAGGWDLVKLEVLGDAKTLYPDMVETLKATEILVKEGFQVMVYCSDDPIAAKRLED--AGAVAVMPL 225 (326)
T ss_pred CHHHHHHHHHHHHHhcCCCeEEEEEcCCCCCcccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHh--cCCEEEeec
Confidence 445555555555554322111 111223468999999999 5799997888888888888877 56520 12
Q ss_pred ceEecCCCC-CcHHHHHHHHhcCCCCCCcEEEEcC---cHhhHHHhhccCccCCCcEEEEecCCC
Q 024375 181 DRLYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVED---RLATLKNVIKEPELDGWNLYLVDWGYN 241 (268)
Q Consensus 181 ~~i~g~~~~-pkp~~l~~~~~~l~~~~~~~~~VGD---s~~Di~aa~~~~~~agi~~i~v~wGy~ 241 (268)
..-||+..+ .+|+.++.+.+...++ ++||= +..|+..|.+ .|.+-+++..|.-
T Consensus 226 ~~pIGsg~gv~~p~~i~~~~e~~~vp----VivdAGIg~~sda~~Ame----lGadgVL~nSaIa 282 (326)
T PRK11840 226 GAPIGSGLGIQNPYTIRLIVEGATVP----VLVDAGVGTASDAAVAME----LGCDGVLMNTAIA 282 (326)
T ss_pred cccccCCCCCCCHHHHHHHHHcCCCc----EEEeCCCCCHHHHHHHHH----cCCCEEEEcceec
Confidence 445665544 7999999999986655 77774 5688888888 7888899998874
No 235
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=79.38 E-value=1.1 Score=37.15 Aligned_cols=16 Identities=19% Similarity=0.368 Sum_probs=14.1
Q ss_pred cEEEEecCcccccChh
Q 024375 3 DLYALDFDGVICDSCE 18 (268)
Q Consensus 3 ~~vlFDlDGTLvDS~~ 18 (268)
++++||.||||.++.+
T Consensus 2 ~~~~~d~dg~l~~~~~ 17 (161)
T TIGR01261 2 KILFIDRDGTLIEEPP 17 (161)
T ss_pred CEEEEeCCCCccccCC
Confidence 6899999999999765
No 236
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=79.25 E-value=1.5 Score=38.18 Aligned_cols=35 Identities=9% Similarity=0.038 Sum_probs=24.5
Q ss_pred CcHHHHHHHHhcCCCC---CCcEEEEcCcHhhHHHhhc
Q 024375 190 PKVNVLKQLQKKPEHQ---GLRLHFVEDRLATLKNVIK 224 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~---~~~~~~VGDs~~Di~aa~~ 224 (268)
.|-..+..+++.++.. +.-++|+||..+|-.+=+.
T Consensus 165 ~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~ 202 (235)
T PF02358_consen 165 NKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRA 202 (235)
T ss_dssp -HHHHHHHHHTTS---------EEEEESSHHHHHHHHT
T ss_pred ChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHH
Confidence 5888999999998765 6789999999999776554
No 237
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=79.24 E-value=1.9 Score=45.21 Aligned_cols=70 Identities=13% Similarity=0.033 Sum_probs=45.6
Q ss_pred CcHHHHHHHHh---cCCCCCCcEEEEcCcHhhHHHhhccCcc-CC--C----cEEEEecCCCCHHHHHhcCCCCCeeecC
Q 024375 190 PKVNVLKQLQK---KPEHQGLRLHFVEDRLATLKNVIKEPEL-DG--W----NLYLVDWGYNTPKERAEAASMPRIQLLQ 259 (268)
Q Consensus 190 pkp~~l~~~~~---~l~~~~~~~~~VGDs~~Di~aa~~~~~~-ag--i----~~i~v~wGy~~~~el~~~~~~P~~~~~~ 259 (268)
.|-..+..+++ .+|..++.+++|||..+|..+=+.++.. .| + ..++|+=|-+. ..-.|.+.+
T Consensus 762 nKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~~~~~g~~~~~~~~~~~v~VG~~~--------S~A~y~L~d 833 (854)
T PLN02205 762 SKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTVGQKP--------SKAKYYLDD 833 (854)
T ss_pred CHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhhhhccCCcccccccceeEEECCCC--------ccCeEecCC
Confidence 67788888764 4688899999999999998886654311 11 1 12344435321 123478888
Q ss_pred hhHHhhhc
Q 024375 260 LSDFCTKL 267 (268)
Q Consensus 260 ~~~~~~~~ 267 (268)
++++...|
T Consensus 834 ~~eV~~lL 841 (854)
T PLN02205 834 TAEIVRLM 841 (854)
T ss_pred HHHHHHHH
Confidence 88886665
No 238
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=79.04 E-value=1.2 Score=36.90 Aligned_cols=16 Identities=25% Similarity=0.312 Sum_probs=14.0
Q ss_pred cEEEEecCcccccChh
Q 024375 3 DLYALDFDGVICDSCE 18 (268)
Q Consensus 3 ~~vlFDlDGTLvDS~~ 18 (268)
+++++|||+|||-|-.
T Consensus 2 ~~lvlDLDeTLi~~~~ 17 (162)
T TIGR02251 2 KTLVLDLDETLVHSTF 17 (162)
T ss_pred cEEEEcCCCCcCCCCC
Confidence 6899999999999943
No 239
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=79.03 E-value=3.9 Score=34.94 Aligned_cols=35 Identities=26% Similarity=0.228 Sum_probs=30.1
Q ss_pred ccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCC
Q 024375 142 PGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVT 177 (268)
Q Consensus 142 pGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~ 177 (268)
|...++|+ ++|++++|+|+++...+..+++. +++.
T Consensus 19 ~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~-l~~~ 56 (221)
T TIGR02463 19 QPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKA-LGLT 56 (221)
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cCCC
Confidence 33667776 79999999999999999999996 9986
No 240
>PLN02580 trehalose-phosphatase
Probab=77.77 E-value=1.2 Score=42.27 Aligned_cols=69 Identities=14% Similarity=0.005 Sum_probs=45.6
Q ss_pred CcHHHHHHHHhcCCCCCCc---EEEEcCcHhhHHHhhccCcc-CCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhh
Q 024375 190 PKVNVLKQLQKKPEHQGLR---LHFVEDRLATLKNVIKEPEL-DGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCT 265 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~~~~---~~~VGDs~~Di~aa~~~~~~-agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~ 265 (268)
.|-..+..+++.++....+ .+||||..+|..+=+..... .|+ .|.|.-| ..+ . .-+|.+.+++++..
T Consensus 301 ~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~-~I~Vgn~--~~~----t--~A~y~L~dp~eV~~ 371 (384)
T PLN02580 301 NKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGY-GILVSSV--PKE----S--NAFYSLRDPSEVME 371 (384)
T ss_pred CHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCce-EEEEecC--CCC----c--cceEEcCCHHHHHH
Confidence 6788999999999987653 38999999999886642110 232 2444322 111 1 22588999999876
Q ss_pred hc
Q 024375 266 KL 267 (268)
Q Consensus 266 ~~ 267 (268)
.|
T Consensus 372 ~L 373 (384)
T PLN02580 372 FL 373 (384)
T ss_pred HH
Confidence 65
No 241
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=76.26 E-value=5.4 Score=34.68 Aligned_cols=40 Identities=23% Similarity=0.053 Sum_probs=34.3
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCC
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTIT 179 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~ 179 (268)
...|+..++|+ ++|+++.++|+++...+..++++ +|+..+
T Consensus 15 ~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~-lg~~~~ 57 (225)
T TIGR02461 15 YEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREE-LGVEPP 57 (225)
T ss_pred CCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCCCCc
Confidence 45678889988 78999999999999999999996 998643
No 242
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=75.73 E-value=1.4 Score=41.61 Aligned_cols=19 Identities=21% Similarity=0.522 Sum_probs=16.2
Q ss_pred cEEEEecCcccccChhHHH
Q 024375 3 DLYALDFDGVICDSCEETA 21 (268)
Q Consensus 3 ~~vlFDlDGTLvDS~~~i~ 21 (268)
|.+.||+||||+||....+
T Consensus 76 K~i~FD~dgtlI~t~sg~v 94 (422)
T KOG2134|consen 76 KIIMFDYDGTLIDTKSGKV 94 (422)
T ss_pred ceEEEecCCceeecCCcce
Confidence 6899999999999987433
No 243
>CHL00162 thiG thiamin biosynthesis protein G; Validated
Probab=75.09 E-value=35 Score=30.66 Aligned_cols=95 Identities=13% Similarity=0.137 Sum_probs=73.8
Q ss_pred CCCCCccHHHHHH------hCCCcEEEEcCCchHHHHHHHHHhcCCCC--CCceEecCCCC-CcHHHHHHHHhcCCCCCC
Q 024375 137 ANRLYPGVSDALK------LASSRIYIVTSNQSRFVETLLRELAGVTI--TPDRLYGLGTG-PKVNVLKQLQKKPEHQGL 207 (268)
Q Consensus 137 ~~~lypGv~e~L~------~~g~~l~IvTnK~~~~~~~~L~~~~gl~~--~f~~i~g~~~~-pkp~~l~~~~~~l~~~~~ 207 (268)
.-.|+|...|+|+ +.|+.+.--||-....++++.+ .|-.- ....=||+..+ .+|..|+.+.+...++
T Consensus 116 ~~~LlPD~~etl~Aae~Lv~eGF~VlPY~~~D~v~a~rLed--~Gc~aVMPlgsPIGSg~Gl~n~~~l~~i~e~~~vp-- 191 (267)
T CHL00162 116 PKYLLPDPIGTLKAAEFLVKKGFTVLPYINADPMLAKHLED--IGCATVMPLGSPIGSGQGLQNLLNLQIIIENAKIP-- 191 (267)
T ss_pred CcccCCChHHHHHHHHHHHHCCCEEeecCCCCHHHHHHHHH--cCCeEEeeccCcccCCCCCCCHHHHHHHHHcCCCc--
Confidence 3579999999999 7999999999999999988877 56421 11223344445 8999999999887766
Q ss_pred cEEEEcC---cHhhHHHhhccCccCCCcEEEEecCCC
Q 024375 208 RLHFVED---RLATLKNVIKEPELDGWNLYLVDWGYN 241 (268)
Q Consensus 208 ~~~~VGD---s~~Di~aa~~~~~~agi~~i~v~wGy~ 241 (268)
++||= +..|+..|.+ .|.+-+++..|.-
T Consensus 192 --VivdAGIgt~sDa~~AmE----lGaDgVL~nSaIa 222 (267)
T CHL00162 192 --VIIDAGIGTPSEASQAME----LGASGVLLNTAVA 222 (267)
T ss_pred --EEEeCCcCCHHHHHHHHH----cCCCEEeecceee
Confidence 77764 5688888888 7888999998874
No 244
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=74.92 E-value=5.4 Score=40.94 Aligned_cols=13 Identities=38% Similarity=0.761 Sum_probs=12.2
Q ss_pred cEEEEecCccccc
Q 024375 3 DLYALDFDGVICD 15 (268)
Q Consensus 3 ~~vlFDlDGTLvD 15 (268)
++|+||+||||++
T Consensus 493 rLi~~D~DGTL~~ 505 (726)
T PRK14501 493 RLLLLDYDGTLVP 505 (726)
T ss_pred eEEEEecCccccC
Confidence 6899999999998
No 245
>PTZ00174 phosphomannomutase; Provisional
Probab=74.74 E-value=4.7 Score=35.43 Aligned_cols=29 Identities=10% Similarity=0.148 Sum_probs=24.5
Q ss_pred cEEEEecCcccccChhHHHHHHHHHHHHh
Q 024375 3 DLYALDFDGVICDSCEETALSAVKAARVR 31 (268)
Q Consensus 3 ~~vlFDlDGTLvDS~~~i~~s~~~a~~~~ 31 (268)
|+|+|||||||+++-..+......+++++
T Consensus 6 klia~DlDGTLL~~~~~is~~~~~ai~~l 34 (247)
T PTZ00174 6 TILLFDVDGTLTKPRNPITQEMKDTLAKL 34 (247)
T ss_pred eEEEEECcCCCcCCCCCCCHHHHHHHHHH
Confidence 89999999999999877777776777776
No 246
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=73.23 E-value=7.1 Score=35.85 Aligned_cols=41 Identities=17% Similarity=0.135 Sum_probs=35.1
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCC
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTIT 179 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~ 179 (268)
...++-+.+.|+ ++|++++++|+|....+..+++. +++..+
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~-Lgl~~p 60 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQ-LRLEHP 60 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-hCCCCe
Confidence 346777888887 79999999999999999999996 998754
No 247
>COG4996 Predicted phosphatase [General function prediction only]
Probab=72.75 E-value=1.9 Score=34.85 Aligned_cols=16 Identities=19% Similarity=0.247 Sum_probs=13.7
Q ss_pred cEEEEecCcccccChh
Q 024375 3 DLYALDFDGVICDSCE 18 (268)
Q Consensus 3 ~~vlFDlDGTLvDS~~ 18 (268)
.+|+||+||||-|-..
T Consensus 1 ~~i~~d~d~t~wdhh~ 16 (164)
T COG4996 1 RAIVFDADKTLWDHHN 16 (164)
T ss_pred CcEEEeCCCccccccc
Confidence 3799999999999764
No 248
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=72.73 E-value=10 Score=33.33 Aligned_cols=40 Identities=18% Similarity=0.228 Sum_probs=33.6
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCC
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTIT 179 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~ 179 (268)
.+-|...+.|+ ++|++++|+|+.+...+..+++. +++...
T Consensus 20 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~-l~~~~~ 62 (270)
T PRK10513 20 TISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKE-LHMEQP 62 (270)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHH-hCCCCC
Confidence 35566778887 79999999999999999999996 888643
No 249
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=70.73 E-value=19 Score=33.58 Aligned_cols=81 Identities=16% Similarity=0.208 Sum_probs=54.0
Q ss_pred CCCCccHHHHHH---hCC-CcEEEEcCCchHHHHHHHHHhcCC-------------CCCCceEecCCCCCcHHHHHHHHh
Q 024375 138 NRLYPGVSDALK---LAS-SRIYIVTSNQSRFVETLLRELAGV-------------TITPDRLYGLGTGPKVNVLKQLQK 200 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g-~~l~IvTnK~~~~~~~~L~~~~gl-------------~~~f~~i~g~~~~pkp~~l~~~~~ 200 (268)
..++|||....+ +.| .++.-+||.+..+-..+-+ +++- ..+|+.++++....|-..+..+++
T Consensus 195 r~~ipGV~~~yr~l~~~~~apvfYvSnSPw~~f~~L~e-fi~~~~~P~GPl~L~~~g~~~~~i~~sga~rK~~~l~nil~ 273 (373)
T COG4850 195 RQVIPGVSAWYRALTNLGDAPVFYVSNSPWQLFPTLQE-FITNRNFPYGPLLLRRWGGVLDNIIESGAARKGQSLRNILR 273 (373)
T ss_pred cCCCCCHHHHHHHHHhcCCCCeEEecCChhHhHHHHHH-HHhcCCCCCCchhHhhcCCcccccccchhhhcccHHHHHHH
Confidence 579999999998 455 8999999999875433322 2221 134566666554467777777777
Q ss_pred cCCCCCCcEEEEcCc-HhhHHH
Q 024375 201 KPEHQGLRLHFVEDR-LATLKN 221 (268)
Q Consensus 201 ~l~~~~~~~~~VGDs-~~Di~a 221 (268)
++. ..+.+.|||+ .+|.+.
T Consensus 274 ~~p--~~kfvLVGDsGE~DpeI 293 (373)
T COG4850 274 RYP--DRKFVLVGDSGEHDPEI 293 (373)
T ss_pred hCC--CceEEEecCCCCcCHHH
Confidence 653 3467999997 466543
No 250
>PRK06769 hypothetical protein; Validated
Probab=70.43 E-value=2.5 Score=35.12 Aligned_cols=13 Identities=31% Similarity=0.299 Sum_probs=11.7
Q ss_pred CcEEEEecCcccc
Q 024375 2 EDLYALDFDGVIC 14 (268)
Q Consensus 2 ~~~vlFDlDGTLv 14 (268)
+++++||.||||.
T Consensus 4 ~~~~~~d~d~~~~ 16 (173)
T PRK06769 4 IQAIFIDRDGTIG 16 (173)
T ss_pred CcEEEEeCCCccc
Confidence 5899999999994
No 251
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=69.00 E-value=11 Score=34.35 Aligned_cols=47 Identities=19% Similarity=0.150 Sum_probs=41.5
Q ss_pred CCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC
Q 024375 140 LYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG 187 (268)
Q Consensus 140 lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~ 187 (268)
.-|.|.+-|. +.|.-|.+=|.-.++.+...|+. .+|..||+.|++++
T Consensus 143 r~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~-~~L~~~Fd~ii~~G 192 (297)
T PF05152_consen 143 RDPAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKE-LKLEGYFDIIICGG 192 (297)
T ss_pred CChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHH-hCCccccEEEEeCC
Confidence 4478888887 78999999999999999999997 99999999999654
No 252
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=68.07 E-value=9.5 Score=32.42 Aligned_cols=40 Identities=18% Similarity=0.194 Sum_probs=34.6
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCC
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTIT 179 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~ 179 (268)
.+-|...+.|+ ++|++++|+|+.+...++.+++. ++++.+
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~-l~~~~~ 60 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVL-IGTSGP 60 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHH-hCCCCc
Confidence 46688888888 79999999999999999999996 887644
No 253
>PLN02580 trehalose-phosphatase
Probab=67.93 E-value=13 Score=35.33 Aligned_cols=38 Identities=24% Similarity=0.311 Sum_probs=22.4
Q ss_pred CCchHHHHHHHHHhcCCCCCCc---eEecCCCCCcHHHHHHHHh
Q 024375 160 SNQSRFVETLLRELAGVTITPD---RLYGLGTGPKVNVLKQLQK 200 (268)
Q Consensus 160 nK~~~~~~~~L~~~~gl~~~f~---~i~g~~~~pkp~~l~~~~~ 200 (268)
||.. .++.+|++ +|+...-+ ..+| |...+-+++..+-+
T Consensus 301 ~KG~-Av~~Ll~~-~g~~~~d~~~pi~iG-DD~TDedmF~~L~~ 341 (384)
T PLN02580 301 NKGK-AVEFLLES-LGLSNCDDVLPIYIG-DDRTDEDAFKVLRE 341 (384)
T ss_pred CHHH-HHHHHHHh-cCCCcccceeEEEEC-CCchHHHHHHhhhc
Confidence 4543 45778885 99875412 3344 44567777776543
No 254
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=66.47 E-value=8.1 Score=32.39 Aligned_cols=27 Identities=15% Similarity=-0.013 Sum_probs=17.8
Q ss_pred CcEEEEecCccccc----Ch-hHHHHHHHHHH
Q 024375 2 EDLYALDFDGVICD----SC-EETALSAVKAA 28 (268)
Q Consensus 2 ~~~vlFDlDGTLvD----S~-~~i~~s~~~a~ 28 (268)
.++++||+|.||+- .+ +++...++...
T Consensus 41 ik~li~DkDNTL~~~~~~~i~~~~~~~~~~l~ 72 (168)
T PF09419_consen 41 IKALIFDKDNTLTPPYEDEIPPEYAEWLNELK 72 (168)
T ss_pred ceEEEEcCCCCCCCCCcCcCCHHHHHHHHHHH
Confidence 37999999999982 22 44444544433
No 255
>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB. The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).
Probab=65.39 E-value=53 Score=29.34 Aligned_cols=74 Identities=9% Similarity=0.014 Sum_probs=46.5
Q ss_pred hCCCcEEEEcC---CchHHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccC
Q 024375 150 LASSRIYIVTS---NQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEP 226 (268)
Q Consensus 150 ~~g~~l~IvTn---K~~~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~ 226 (268)
+.|.++.+++. .....++.+.+. +. .. ..|+ ....|+-+...+.... ++||.+.|-+..|..
T Consensus 203 ~~g~~v~~i~~~~~~D~~~~~~l~~~-~~--~~-~~i~---~~~~~~e~~~~i~~~~------~vI~~RlH~~I~A~~-- 267 (298)
T TIGR03609 203 DTGAFVLFLPFQQPQDLPLARALRDQ-LL--GP-AEVL---SPLDPEELLGLFASAR------LVIGMRLHALILAAA-- 267 (298)
T ss_pred hhCCeEEEEeCCcchhHHHHHHHHHh-cC--CC-cEEE---ecCCHHHHHHHHhhCC------EEEEechHHHHHHHH--
Confidence 34887766663 444455555543 32 11 2333 1234554555554433 999999999999998
Q ss_pred ccCCCcEEEEecCC
Q 024375 227 ELDGWNLYLVDWGY 240 (268)
Q Consensus 227 ~~agi~~i~v~wGy 240 (268)
+|+|++++.|.-
T Consensus 268 --~gvP~i~i~y~~ 279 (298)
T TIGR03609 268 --AGVPFVALSYDP 279 (298)
T ss_pred --cCCCEEEeeccH
Confidence 899999997654
No 256
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=64.72 E-value=4 Score=33.61 Aligned_cols=19 Identities=16% Similarity=0.288 Sum_probs=15.9
Q ss_pred cEEEEecCcccccChhHHH
Q 024375 3 DLYALDFDGVICDSCEETA 21 (268)
Q Consensus 3 ~~vlFDlDGTLvDS~~~i~ 21 (268)
..+++|||.||+.|...-.
T Consensus 7 l~LVLDLDeTLihs~~~~~ 25 (156)
T TIGR02250 7 LHLVLDLDQTLIHTTKDPT 25 (156)
T ss_pred eEEEEeCCCCcccccccCc
Confidence 4789999999999987543
No 257
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=64.31 E-value=4.9 Score=33.27 Aligned_cols=14 Identities=21% Similarity=0.145 Sum_probs=12.4
Q ss_pred cEEEEecCcccccC
Q 024375 3 DLYALDFDGVICDS 16 (268)
Q Consensus 3 ~~vlFDlDGTLvDS 16 (268)
++|+||+||||.+.
T Consensus 26 ~~vv~D~Dgtl~~~ 39 (170)
T TIGR01668 26 KGVVLDKDNTLVYP 39 (170)
T ss_pred CEEEEecCCccccC
Confidence 68999999999954
No 258
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=63.98 E-value=14 Score=31.41 Aligned_cols=40 Identities=18% Similarity=0.187 Sum_probs=33.8
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCC
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTIT 179 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~ 179 (268)
.+-|...+.|. ++|++++|+|+++...+..+++. +|+..+
T Consensus 20 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~-l~~~~~ 62 (230)
T PRK01158 20 RLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKL-IGTSGP 62 (230)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHH-hCCCCc
Confidence 34577888888 69999999999999999999996 998754
No 259
>PF06014 DUF910: Bacterial protein of unknown function (DUF910); InterPro: IPR009256 This family consists of several short bacterial proteins of unknown function.; PDB: 2NN4_A.
Probab=63.52 E-value=5 Score=28.00 Aligned_cols=25 Identities=32% Similarity=0.286 Sum_probs=15.5
Q ss_pred HHHHHhcCCCCCCcEEEEcCcHhhHHHhh
Q 024375 195 LKQLQKKPEHQGLRLHFVEDRLATLKNVI 223 (268)
Q Consensus 195 l~~~~~~l~~~~~~~~~VGDs~~Di~aa~ 223 (268)
+.++++++|+= +|+||+..|++...
T Consensus 7 VqQLLK~fG~~----IY~gdr~~DielM~ 31 (62)
T PF06014_consen 7 VQQLLKKFGII----IYVGDRLWDIELME 31 (62)
T ss_dssp HHHHHHTTS---------S-HHHHHHHHH
T ss_pred HHHHHHHCCEE----EEeCChHHHHHHHH
Confidence 46788888874 99999999998654
No 260
>COG0761 lytB 4-Hydroxy-3-methylbut-2-enyl diphosphate reductase IspH [Lipid metabolism]
Probab=61.97 E-value=45 Score=30.47 Aligned_cols=81 Identities=20% Similarity=0.178 Sum_probs=60.3
Q ss_pred cEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcE
Q 024375 154 RIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (268)
Q Consensus 154 ~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~ 233 (268)
.++-+|.+.++.++.+... ..+ -.|+|+..-.+..-|.++.++.|. .+..| |+..||....= .|+.+
T Consensus 194 ~ICyAT~nRQ~Avk~la~~-~Dl----~iVVG~~nSSNs~rL~eiA~~~g~---~aylI-d~~~ei~~~w~----~~~~~ 260 (294)
T COG0761 194 DICYATQNRQDAVKELAPE-VDL----VIVVGSKNSSNSNRLAEIAKRHGK---PAYLI-DDAEEIDPEWL----KGVKT 260 (294)
T ss_pred ccchhhhhHHHHHHHHhhc-CCE----EEEECCCCCccHHHHHHHHHHhCC---CeEEe-CChHhCCHHHh----cCccE
Confidence 3788999999999888875 432 356776544666778888888886 34666 66688876554 78999
Q ss_pred EEEecCCCCHHHHH
Q 024375 234 YLVDWGYNTPKERA 247 (268)
Q Consensus 234 i~v~wGy~~~~el~ 247 (268)
||++=|...++.+-
T Consensus 261 VGvTAGAStPd~lV 274 (294)
T COG0761 261 VGVTAGASTPDWLV 274 (294)
T ss_pred EEEecCCCCCHHHH
Confidence 99999998877653
No 261
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=61.63 E-value=15 Score=32.00 Aligned_cols=42 Identities=14% Similarity=0.101 Sum_probs=31.8
Q ss_pred ccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEec
Q 024375 142 PGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYG 185 (268)
Q Consensus 142 pGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g 185 (268)
|...++++ ++|++++++|+++...++++++. +++.. .+.+++
T Consensus 24 ~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~-~~~~~-p~~~I~ 68 (249)
T TIGR01485 24 LRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQ-KPLLT-PDIWVT 68 (249)
T ss_pred HHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhc-CCCCC-CCEEEE
Confidence 44445554 78999999999999999999996 88754 444554
No 262
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=61.37 E-value=4.8 Score=35.49 Aligned_cols=71 Identities=13% Similarity=-0.002 Sum_probs=39.2
Q ss_pred hCCCcEEEEcCCchH---HHHHHHHHhcCCC----CCCceEecCCC-C-CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHH
Q 024375 150 LASSRIYIVTSNQSR---FVETLLRELAGVT----ITPDRLYGLGT-G-PKVNVLKQLQKKPEHQGLRLHFVEDRLATLK 220 (268)
Q Consensus 150 ~~g~~l~IvTnK~~~---~~~~~L~~~~gl~----~~f~~i~g~~~-~-pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~ 220 (268)
.+-+-..|..-.... .-...|.. .|+. ..|-.+++... | ...+.+.+.-++++... -++-+||+.||+=
T Consensus 146 ~rEyseti~~rs~d~~~~~~~~~L~e-~glt~v~garf~~v~~as~gKg~Aa~~ll~~y~rl~~~r-~t~~~GDg~nD~P 223 (274)
T COG3769 146 LREYSETIIWRSSDERMAQFTARLNE-RGLTFVHGARFWHVLDASAGKGQAANWLLETYRRLGGAR-TTLGLGDGPNDAP 223 (274)
T ss_pred HHHhhhheeecccchHHHHHHHHHHh-cCceEEeccceEEEeccccCccHHHHHHHHHHHhcCcee-EEEecCCCCCccc
Confidence 344444444433333 12334442 5664 24556666443 3 44556666666665543 4899999999975
Q ss_pred Hh
Q 024375 221 NV 222 (268)
Q Consensus 221 aa 222 (268)
.-
T Consensus 224 l~ 225 (274)
T COG3769 224 LL 225 (274)
T ss_pred HH
Confidence 43
No 263
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=60.98 E-value=18 Score=31.58 Aligned_cols=40 Identities=20% Similarity=0.379 Sum_probs=33.7
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCC
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTIT 179 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~ 179 (268)
.+-|...+.|+ ++|++++|+|+.+...+..++++ +++..+
T Consensus 16 ~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~-~~~~~~ 58 (256)
T TIGR00099 16 TISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKE-LGLDTP 58 (256)
T ss_pred ccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-cCCCCC
Confidence 35577888887 79999999999999999999996 887643
No 264
>COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=60.68 E-value=35 Score=33.40 Aligned_cols=96 Identities=16% Similarity=0.186 Sum_probs=72.8
Q ss_pred cCCCCCccHH--HHHH---hCCCcEEEEcC--CchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCC
Q 024375 136 GANRLYPGVS--DALK---LASSRIYIVTS--NQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEH 204 (268)
Q Consensus 136 ~~~~lypGv~--e~L~---~~g~~l~IvTn--K~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~ 204 (268)
....|||... |+.+ +.|.++.++|- =|.+..+.+|.. +|.+.+---|+-+. .|..-..+..+++.-++
T Consensus 94 EKevLypn~~~~eL~e~ai~n~krVIlISDMYlps~Il~~~L~s-~g~d~~nipiY~S~e~rl~KnSg~LFk~Vlk~EnV 172 (635)
T COG5610 94 EKEVLYPNKKNIELVEEAIKNEKRVILISDMYLPSSILRTFLNS-FGPDFNNIPIYMSSEFRLKKNSGNLFKAVLKLENV 172 (635)
T ss_pred ceeEeeccccchHHHHHHHhCCCeEEEEecccCcHHHHHHHHHh-cCCCccCceeeecceeehhcccchHHHHHHhhcCC
Confidence 4457898754 5555 78999999995 678889999997 99886644466443 23556778888887899
Q ss_pred CCCcEEEEcCcH-hhHHHhhccCccCCCcEEEE
Q 024375 205 QGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLV 236 (268)
Q Consensus 205 ~~~~~~~VGDs~-~Di~aa~~~~~~agi~~i~v 236 (268)
++...+-|||.. .|...+++ -||.+...
T Consensus 173 d~~~w~H~GDN~~aD~l~pk~----LgI~Tlf~ 201 (635)
T COG5610 173 DPKKWIHCGDNWVADYLKPKN----LGISTLFY 201 (635)
T ss_pred ChhheEEecCchhhhhcCccc----cchhHHHH
Confidence 999999999975 68888887 67766554
No 265
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=60.31 E-value=17 Score=32.10 Aligned_cols=40 Identities=10% Similarity=0.028 Sum_probs=34.6
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCC
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTIT 179 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~ 179 (268)
.+-|...+.|+ ++|++++++|+.+...+..+++. +++..+
T Consensus 19 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~-l~~~~~ 61 (272)
T PRK15126 19 HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGA-LSLDAY 61 (272)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH-cCCCCc
Confidence 46677888888 79999999999999999999996 998654
No 266
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=59.85 E-value=13 Score=34.12 Aligned_cols=43 Identities=26% Similarity=0.536 Sum_probs=33.8
Q ss_pred cccCCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHH--hcCCC
Q 024375 134 WIGANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRE--LAGVT 177 (268)
Q Consensus 134 ~~~~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~--~~gl~ 177 (268)
|. ...+-||+.|+|+ +.|..+.+|||++..+-+..+++ .+|+.
T Consensus 34 W~-g~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~ 81 (306)
T KOG2882|consen 34 WL-GEKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFN 81 (306)
T ss_pred ee-cCCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCcc
Confidence 44 5688999999999 79999999999988877777663 14554
No 267
>KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only]
Probab=59.64 E-value=41 Score=32.03 Aligned_cols=79 Identities=11% Similarity=0.125 Sum_probs=54.4
Q ss_pred CCcEEEEcCCch-HHHHHHHHHhcCCCCCC--ceEecCCCCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCcc
Q 024375 152 SSRIYIVTSNQS-RFVETLLRELAGVTITP--DRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPEL 228 (268)
Q Consensus 152 g~~l~IvTnK~~-~~~~~~L~~~~gl~~~f--~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~ 228 (268)
++-=.+|||..- ..+-++|- +||...| +-|+....--|-..++++..+.|. +-.-+.|||..---.+||+
T Consensus 370 ncvnVlvTttqLipalaKvLL--~gLg~~fpiENIYSa~kiGKescFerI~~RFg~-K~~yvvIgdG~eee~aAK~---- 442 (468)
T KOG3107|consen 370 NCVNVLVTTTQLIPALAKVLL--YGLGSSFPIENIYSATKIGKESCFERIQSRFGR-KVVYVVIGDGVEEEQAAKA---- 442 (468)
T ss_pred ceeEEEEeccchhHHHHHHHH--HhcCCcccchhhhhhhhccHHHHHHHHHHHhCC-ceEEEEecCcHHHHHHHHh----
Confidence 333456666544 33444443 6776554 566654433777889999999987 5667889999888889998
Q ss_pred CCCcEEEEe
Q 024375 229 DGWNLYLVD 237 (268)
Q Consensus 229 agi~~i~v~ 237 (268)
-++|++=+.
T Consensus 443 ln~PfwrI~ 451 (468)
T KOG3107|consen 443 LNMPFWRIS 451 (468)
T ss_pred hCCceEeec
Confidence 789986553
No 268
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=59.52 E-value=18 Score=31.78 Aligned_cols=40 Identities=20% Similarity=0.262 Sum_probs=35.2
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCC
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTIT 179 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~ 179 (268)
..-|-..+.|+ ++|++++|+|+.+-..+..+++. +++..+
T Consensus 20 ~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~-l~~~~~ 62 (264)
T COG0561 20 TISPETKEALARLREKGVKVVLATGRPLPDVLSILEE-LGLDGP 62 (264)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHH-cCCCcc
Confidence 36677888888 89999999999999999999996 998763
No 269
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=59.12 E-value=44 Score=27.69 Aligned_cols=88 Identities=13% Similarity=0.094 Sum_probs=51.6
Q ss_pred CCccHHHHHH---hCCCcEEEEcCCchH---HHHHHHHHhc---CCCCCCceEecC----------CC-CCcHHH-----
Q 024375 140 LYPGVSDALK---LASSRIYIVTSNQSR---FVETLLRELA---GVTITPDRLYGL----------GT-GPKVNV----- 194 (268)
Q Consensus 140 lypGv~e~L~---~~g~~l~IvTnK~~~---~~~~~L~~~~---gl~~~f~~i~g~----------~~-~pkp~~----- 194 (268)
..|||.++.. ++|+++.-+|+.+.- .++.-|.+ . |.....-.++.+ +. .++|+.
T Consensus 28 ~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~-~~q~~~~lP~Gpv~~sP~~l~~al~rEvi~~~p~~fK~~~ 106 (157)
T PF08235_consen 28 THPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQ-HQQQGHNLPDGPVLLSPDSLFSALHREVISKDPEEFKIAC 106 (157)
T ss_pred hhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHH-HHhCCccCCCCCEEECCcchhhhhhccccccChHHHHHHH
Confidence 3589999998 899999999999854 44445554 3 222222233332 11 145553
Q ss_pred HHHHHhcCCCCCCc-EEEEcCcHhhHHHhhccCccCCCc
Q 024375 195 LKQLQKKPEHQGLR-LHFVEDRLATLKNVIKEPELDGWN 232 (268)
Q Consensus 195 l~~~~~~l~~~~~~-~~~VGDs~~Di~aa~~~~~~agi~ 232 (268)
|..+...+...... ..-.|.+.+|+.+-++ +|++
T Consensus 107 L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~----vGip 141 (157)
T PF08235_consen 107 LRDLRALFPPDGNPFYAGFGNRSTDVIAYKA----VGIP 141 (157)
T ss_pred HHHHHHhcCCCCCeEEEecCCcHHHHHHHHH----cCCC
Confidence 33333322211111 3347999999999988 6665
No 270
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=59.10 E-value=17 Score=31.85 Aligned_cols=36 Identities=22% Similarity=0.160 Sum_probs=30.6
Q ss_pred ccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCC
Q 024375 142 PGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTI 178 (268)
Q Consensus 142 pGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~ 178 (268)
+...+.|+ ++|++++++|+++...+..+++. +|+..
T Consensus 19 ~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~-~~~~~ 57 (256)
T TIGR01486 19 GPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKE-LGLED 57 (256)
T ss_pred hHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cCCCC
Confidence 44677777 78999999999999999999996 88753
No 271
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=58.87 E-value=20 Score=31.29 Aligned_cols=40 Identities=18% Similarity=0.278 Sum_probs=34.2
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCC
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTIT 179 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~ 179 (268)
.+-|...+.|+ ++|++++|+|+.+...+..+++. +++..+
T Consensus 20 ~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~-l~~~~~ 62 (272)
T PRK10530 20 TILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQA-LALDTP 62 (272)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHh-cCCCCC
Confidence 46677888887 79999999999999999999996 888643
No 272
>KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=58.83 E-value=18 Score=36.58 Aligned_cols=51 Identities=18% Similarity=0.133 Sum_probs=42.5
Q ss_pred CCCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhcCCC-CCC-ceEecCCC
Q 024375 137 ANRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVT-ITP-DRLYGLGT 188 (268)
Q Consensus 137 ~~~lypGv~e~L~--~~g~~l~IvTnK~~~~~~~~L~~~~gl~-~~f-~~i~g~~~ 188 (268)
.+++=|++.++|+ .+=+.|.|.|--.+.+|..+++ ...-. .|| +.|++.+.
T Consensus 199 ~vKlRP~~~efL~~~sklfemhVyTmg~R~YA~~i~~-liDP~~~lF~dRIisrde 253 (635)
T KOG0323|consen 199 LVKLRPFVHEFLKEANKLFEMHVYTMGTRDYALEIAK-LIDPEGKYFGDRIISRDE 253 (635)
T ss_pred EEEeCccHHHHHHHHHhhceeEEEeccchHHHHHHHH-HhCCCCccccceEEEecC
Confidence 4678899999999 7889999999999999999999 46554 355 78888764
No 273
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=58.74 E-value=5 Score=42.39 Aligned_cols=15 Identities=20% Similarity=0.492 Sum_probs=12.4
Q ss_pred cEEEEecCcccccCh
Q 024375 3 DLYALDFDGVICDSC 17 (268)
Q Consensus 3 ~~vlFDlDGTLvDS~ 17 (268)
.+++|||||||+.-.
T Consensus 592 RLlfLDyDGTLap~~ 606 (934)
T PLN03064 592 RLLILGFNATLTEPV 606 (934)
T ss_pred eEEEEecCceeccCC
Confidence 488999999999743
No 274
>PLN02382 probable sucrose-phosphatase
Probab=58.45 E-value=5.4 Score=38.18 Aligned_cols=48 Identities=15% Similarity=0.133 Sum_probs=27.8
Q ss_pred HHHHHHHHhc---CCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHH
Q 024375 165 FVETLLRELA---GVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKN 221 (268)
Q Consensus 165 ~~~~~L~~~~---gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~a 221 (268)
.++.++++ + |+..- +.+.-+|...+-+++..+ +. -.+.+|.+...+..
T Consensus 179 Al~~L~~~-~~~~gi~~~-~~iafGDs~NDleMl~~a----g~---~gvam~NA~~elk~ 229 (413)
T PLN02382 179 ALAYLLKK-LKAEGKAPV-NTLVCGDSGNDAELFSVP----DV---YGVMVSNAQEELLQ 229 (413)
T ss_pred HHHHHHHH-hhhcCCChh-cEEEEeCCHHHHHHHhcC----CC---CEEEEcCCcHHHHH
Confidence 34556664 7 76543 334435555666665542 21 13888998888875
No 275
>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=58.38 E-value=10 Score=31.55 Aligned_cols=48 Identities=15% Similarity=0.048 Sum_probs=31.9
Q ss_pred cHHHHHHHHhcC-CCCCCcEEEEcCcH-hhHHHhhccCccCCCcEEEEecCCCC
Q 024375 191 KVNVLKQLQKKP-EHQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNT 242 (268)
Q Consensus 191 kp~~l~~~~~~l-~~~~~~~~~VGDs~-~Di~aa~~~~~~agi~~i~v~wGy~~ 242 (268)
..|.+.+.-..- =..++|++||||+. .||..|.. .|-=.|+..=|-+.
T Consensus 123 t~E~~~y~~~Nshv~~~se~~~vGDRlfTDI~~aN~----mGs~gVw~~~gv~~ 172 (190)
T KOG2961|consen 123 TAEEVEYHFGNSHVCTSSELIMVGDRLFTDIVYANR----MGSLGVWTEPGVRA 172 (190)
T ss_pred cHHHHHHHhCCcccCChhHeEEEccchhhhHhhhhh----ccceeEEecccccc
Confidence 345555543321 26788999999997 69999998 45555666666544
No 276
>PF06117 DUF957: Enterobacterial protein of unknown function (DUF957); InterPro: IPR009301 This family consists of several hypothetical proteins from Escherichia coli, Salmonella typhi, Shigella flexneri and Proteus vulgaris. The function of this family is unknown.
Probab=58.23 E-value=14 Score=25.82 Aligned_cols=30 Identities=20% Similarity=-0.014 Sum_probs=23.0
Q ss_pred CCcEEEEecCcccccChhHHHHHHHHHHHHh
Q 024375 1 MEDLYALDFDGVICDSCEETALSAVKAARVR 31 (268)
Q Consensus 1 m~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~ 31 (268)
|+.-|+||=|+.-+||+. +..++..+.+.+
T Consensus 23 ~es~iiFDNded~tdSa~-llp~ie~a~~~~ 52 (65)
T PF06117_consen 23 CESDIIFDNDEDKTDSAA-LLPAIEQARADV 52 (65)
T ss_pred CCCCeeecCCCcccchHH-HHHHHHHHHHHH
Confidence 456799999999999987 556666655555
No 277
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=57.94 E-value=5 Score=41.75 Aligned_cols=70 Identities=13% Similarity=0.018 Sum_probs=41.2
Q ss_pred CcHHHHHHHHhcC------CCCCCcEEEEcCc---HhhHHHhhccCc------------------------cCCCcEEEE
Q 024375 190 PKVNVLKQLQKKP------EHQGLRLHFVEDR---LATLKNVIKEPE------------------------LDGWNLYLV 236 (268)
Q Consensus 190 pkp~~l~~~~~~l------~~~~~~~~~VGDs---~~Di~aa~~~~~------------------------~agi~~i~v 236 (268)
.|-..+..+++++ +..++=++.|||- .=|+-.+..... ..+-.+++|
T Consensus 678 nKG~Av~~ll~~~~~~~~~~~~~dfvl~~Gdd~~~DEdmF~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 757 (797)
T PLN03063 678 TKGAAIGRILGEIVHNKSMTTPIDFVFCSGYFLEKDEDVYTFFEPEILSKKKSSSSNYSDSDKKVSSNLVDLKGENYFSC 757 (797)
T ss_pred ChHHHHHHHHHHhhhccccCCCCCEEEEeCCCCCCcHHHHHhccccccccccccccccccccccccccccccccCceEEE
Confidence 6778888888765 2245567888984 345655443110 011234677
Q ss_pred ecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 237 DWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 237 ~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
+-|-.. ..-.|.+.++.++...|
T Consensus 758 ~VG~~~--------s~A~y~l~~~~eV~~lL 780 (797)
T PLN03063 758 AIGQAR--------TKARYVLDSSNDVVSLL 780 (797)
T ss_pred EECCCC--------ccCeecCCCHHHHHHHH
Confidence 778532 12347788888876655
No 278
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=56.75 E-value=23 Score=29.96 Aligned_cols=39 Identities=18% Similarity=0.288 Sum_probs=32.7
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCC
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTI 178 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~ 178 (268)
.+-|...+.|+ ++|++++++|+.+...+..+++. +|+..
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~-l~~~~ 56 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKL-IGTPD 56 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHH-hCCCC
Confidence 35577778887 69999999999999999999996 88643
No 279
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=56.04 E-value=6.8 Score=35.92 Aligned_cols=16 Identities=19% Similarity=0.370 Sum_probs=14.3
Q ss_pred CcEEEEecCcccccCh
Q 024375 2 EDLYALDFDGVICDSC 17 (268)
Q Consensus 2 ~~~vlFDlDGTLvDS~ 17 (268)
.|+|+||||.||....
T Consensus 3 ~k~~v~DlDnTlw~gv 18 (320)
T TIGR01686 3 LKVLVLDLDNTLWGGV 18 (320)
T ss_pred eEEEEEcCCCCCCCCE
Confidence 5899999999998875
No 280
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=54.50 E-value=46 Score=34.91 Aligned_cols=102 Identities=15% Similarity=0.164 Sum_probs=65.1
Q ss_pred CCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCC---------------CCc----------eEecCCCC-C
Q 024375 140 LYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTI---------------TPD----------RLYGLGTG-P 190 (268)
Q Consensus 140 lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~---------------~f~----------~i~g~~~~-p 190 (268)
|=+.+.+... +.|+++.+||.-....++.+.++ -||-. ..+ +|.|.+-+ -
T Consensus 591 PR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~-vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~~~ 669 (1019)
T KOG0203|consen 591 PRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKS-VGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELPDM 669 (1019)
T ss_pred CcccCchhhhhhhhhCceEEEEecCccchhhhhhhh-eeeecCCchhhhhhHHhcCCcccccCccccceEEEeccccccc
Confidence 3445555555 79999999999888888888775 66421 011 13344422 3
Q ss_pred cHHHHHHHHhcCC------CCCCc--------------EEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhc
Q 024375 191 KVNVLKQLQKKPE------HQGLR--------------LHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEA 249 (268)
Q Consensus 191 kp~~l~~~~~~l~------~~~~~--------------~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~ 249 (268)
.++-+.++++... .+|++ +-..||+.||-=|-|+ |. |||.-|+.+.+--+++
T Consensus 670 ~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKK----AD---IGVAMGiaGSDvsKqA 741 (1019)
T KOG0203|consen 670 SSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKK----AD---IGVAMGIAGSDVSKQA 741 (1019)
T ss_pred CHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcc----cc---cceeeccccchHHHhh
Confidence 4555555555432 23333 2356999999999888 43 8899999887755554
No 281
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=53.56 E-value=26 Score=36.92 Aligned_cols=17 Identities=24% Similarity=0.450 Sum_probs=14.1
Q ss_pred CCcEEEEecCcccccCh
Q 024375 1 MEDLYALDFDGVICDSC 17 (268)
Q Consensus 1 m~~~vlFDlDGTLvDS~ 17 (268)
|.++|+||+||||++..
T Consensus 595 ~~rlI~LDyDGTLlp~~ 611 (854)
T PLN02205 595 TTRAILLDYDGTLMPQA 611 (854)
T ss_pred cCeEEEEecCCcccCCc
Confidence 34789999999999665
No 282
>PRK10976 putative hydrolase; Provisional
Probab=53.42 E-value=24 Score=30.92 Aligned_cols=40 Identities=15% Similarity=0.115 Sum_probs=33.5
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCC
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTIT 179 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~ 179 (268)
.+-|...+.|+ ++|++++|+|+.+...+..+++. +|++.+
T Consensus 19 ~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~-l~~~~~ 61 (266)
T PRK10976 19 TLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDN-LEIKSY 61 (266)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHh-cCCCCe
Confidence 35566778887 79999999999999999999996 888643
No 283
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=53.19 E-value=29 Score=30.73 Aligned_cols=38 Identities=13% Similarity=0.104 Sum_probs=32.3
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCC
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVT 177 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~ 177 (268)
.+.+-..+.|+ ++|++++|+|+++...+..+++. +|++
T Consensus 24 ~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~-l~~~ 64 (271)
T PRK03669 24 YDWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQT-LGLQ 64 (271)
T ss_pred cCcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHH-hCCC
Confidence 34566777777 79999999999999999999996 9985
No 284
>PF05690 ThiG: Thiazole biosynthesis protein ThiG; InterPro: IPR008867 This family consists of several bacterial thiazole biosynthesis protein G sequences. ThiG, together with ThiF and ThiH, is proposed to be involved in the synthesis of 4-methyl-5-(b-hydroxyethyl)thiazole (THZ) which is an intermediate in the thiazole production pathway [].; GO: 0009228 thiamine biosynthetic process; PDB: 1WV2_B 1TYG_C 1XM3_B 2HTM_C 2YZR_C.
Probab=52.60 E-value=69 Score=28.50 Aligned_cols=93 Identities=16% Similarity=0.205 Sum_probs=61.9
Q ss_pred CCCCCccHHHHHH------hCCCcEEEEcCCchHHHHHHHHHhcCCCCC--CceEecCCCC-CcHHHHHHHHhcCCCCCC
Q 024375 137 ANRLYPGVSDALK------LASSRIYIVTSNQSRFVETLLRELAGVTIT--PDRLYGLGTG-PKVNVLKQLQKKPEHQGL 207 (268)
Q Consensus 137 ~~~lypGv~e~L~------~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~--f~~i~g~~~~-pkp~~l~~~~~~l~~~~~ 207 (268)
.-.|+|...|+|+ +.|+.+.--+|-....++++.+ .|-.-. ...=||+..+ .+|..++.++++.+++
T Consensus 102 ~~~L~PD~~etl~Aae~Lv~eGF~VlPY~~~D~v~akrL~d--~GcaavMPlgsPIGSg~Gi~n~~~l~~i~~~~~vP-- 177 (247)
T PF05690_consen 102 DKTLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLAKRLED--AGCAAVMPLGSPIGSGRGIQNPYNLRIIIERADVP-- 177 (247)
T ss_dssp TTT--B-HHHHHHHHHHHHHTT-EEEEEE-S-HHHHHHHHH--TT-SEBEEBSSSTTT---SSTHHHHHHHHHHGSSS--
T ss_pred CCCcCCChhHHHHHHHHHHHCCCEEeecCCCCHHHHHHHHH--CCCCEEEecccccccCcCCCCHHHHHHHHHhcCCc--
Confidence 3568999999999 7999999999999999988887 574210 1112233334 7899999999998887
Q ss_pred cEEEEcC---cHhhHHHhhccCccCCCcEEEEecC
Q 024375 208 RLHFVED---RLATLKNVIKEPELDGWNLYLVDWG 239 (268)
Q Consensus 208 ~~~~VGD---s~~Di~aa~~~~~~agi~~i~v~wG 239 (268)
+.|+= ++.|..-|.+ .|.+-|.|...
T Consensus 178 --vIvDAGiG~pSdaa~AME----lG~daVLvNTA 206 (247)
T PF05690_consen 178 --VIVDAGIGTPSDAAQAME----LGADAVLVNTA 206 (247)
T ss_dssp --BEEES---SHHHHHHHHH----TT-SEEEESHH
T ss_pred --EEEeCCCCCHHHHHHHHH----cCCceeehhhH
Confidence 66642 5788888888 78888888654
No 285
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=52.19 E-value=34 Score=28.88 Aligned_cols=78 Identities=15% Similarity=0.098 Sum_probs=34.5
Q ss_pred cccCCCCCccHHHHHHhCCCcEEEEcCCchHHHHH-------HHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCC
Q 024375 134 WIGANRLYPGVSDALKLASSRIYIVTSNQSRFVET-------LLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQG 206 (268)
Q Consensus 134 ~~~~~~lypGv~e~L~~~g~~l~IvTnK~~~~~~~-------~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~ 206 (268)
..-++.+.|+....+.++|++++++...-.+..-+ +.+. +-..|+.|+..+ +.-.+-+.++|.++
T Consensus 100 i~~EtElWPnll~~a~~~~ip~~LvNarls~~s~~~~~~~~~~~r~---~l~~f~~i~aqs-----~~da~r~~~lG~~~ 171 (186)
T PF04413_consen 100 IWVETELWPNLLREAKRRGIPVVLVNARLSERSFRRYRRFPFLFRP---LLSRFDRILAQS-----EADAERFRKLGAPP 171 (186)
T ss_dssp EEES----HHHHHH-----S-EEEEEE--------------HHHHH---HGGG-SEEEESS-----HHHHHHHHTTT-S-
T ss_pred EEEccccCHHHHHHHhhcCCCEEEEeeeeccccchhhhhhHHHHHH---HHHhCCEEEECC-----HHHHHHHHHcCCCc
Confidence 35567899999888889999999998655443211 1221 113478887654 23344567899999
Q ss_pred CcEEEEcCcHhhH
Q 024375 207 LRLHFVEDRLATL 219 (268)
Q Consensus 207 ~~~~~VGDs~~Di 219 (268)
+++...|+-..|+
T Consensus 172 ~~v~v~GnlKfd~ 184 (186)
T PF04413_consen 172 ERVHVTGNLKFDQ 184 (186)
T ss_dssp -SEEE---GGG--
T ss_pred ceEEEeCcchhcc
Confidence 9999999998886
No 286
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=52.11 E-value=1e+02 Score=32.60 Aligned_cols=107 Identities=21% Similarity=0.221 Sum_probs=71.7
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCC---CceEecCCCC-----------CcH---------
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTIT---PDRLYGLGTG-----------PKV--------- 192 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~---f~~i~g~~~~-----------pkp--------- 192 (268)
+.=|||++.++ .+|+++-.||.-.--.++++-.+ .||... |-.+-|.+-. ||-
T Consensus 647 PvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~e-CGILt~~~d~~~lEG~eFr~~s~ee~~~i~pkl~VlARSSP~ 725 (1034)
T KOG0204|consen 647 PVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARE-CGILTPGGDFLALEGKEFRELSQEERDKIWPKLRVLARSSPN 725 (1034)
T ss_pred CCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHH-cccccCCCccceecchhhhhcCHHHHHhhhhhheeeecCCCc
Confidence 45699999999 79999999999999999999996 998643 2333355411 221
Q ss_pred --HHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecC
Q 024375 193 --NVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ 259 (268)
Q Consensus 193 --~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~ 259 (268)
..+-+.+++.| +=+..-||..||--|-++ |. ||..-|....+--+++ -|+++.+
T Consensus 726 DK~lLVk~L~~~g---~VVAVTGDGTNDaPALke----AD---VGlAMGIaGTeVAKEa---SDIIi~D 781 (1034)
T KOG0204|consen 726 DKHLLVKGLIKQG---EVVAVTGDGTNDAPALKE----AD---VGLAMGIAGTEVAKEA---SDIIILD 781 (1034)
T ss_pred hHHHHHHHHHhcC---cEEEEecCCCCCchhhhh----cc---cchhccccchhhhhhh---CCeEEEc
Confidence 22333333322 224567999999999998 43 6677787666544443 3566643
No 287
>PRK00994 F420-dependent methylenetetrahydromethanopterin dehydrogenase; Provisional
Probab=51.36 E-value=86 Score=28.01 Aligned_cols=65 Identities=11% Similarity=0.066 Sum_probs=41.0
Q ss_pred hCCCcEEEEcCCc---hHHHHHHHHHhc-CCCCCCceEecCCCC-CcHHHHHHHHhcCCCCCCcEEEEcCcHh
Q 024375 150 LASSRIYIVTSNQ---SRFVETLLRELA-GVTITPDRLYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVEDRLA 217 (268)
Q Consensus 150 ~~g~~l~IvTnK~---~~~~~~~L~~~~-gl~~~f~~i~g~~~~-pkp~~l~~~~~~l~~~~~~~~~VGDs~~ 217 (268)
..++.+-++|+-. .+.+.......+ .++.-|-.+++.... |-|..-+++++..|++ |+.|||.+.
T Consensus 29 RedI~vrv~gsGaKm~pe~~~~~~~~~~~~~~pDf~i~isPN~a~PGP~~ARE~l~~~~iP---~IvI~D~p~ 98 (277)
T PRK00994 29 REDIDVRVVGSGAKMGPEEVEEVVKKMLEEWKPDFVIVISPNPAAPGPKKAREILKAAGIP---CIVIGDAPG 98 (277)
T ss_pred ccCceEEEeccCCCCCHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCchHHHHHHHhcCCC---EEEEcCCCc
Confidence 4588888888632 223332222101 344445566666543 7777778888888875 899999875
No 288
>KOG3128 consensus Uncharacterized conserved protein [Function unknown]
Probab=49.88 E-value=2e+02 Score=26.07 Aligned_cols=134 Identities=10% Similarity=0.089 Sum_probs=75.0
Q ss_pred hCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEe
Q 024375 108 WSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLY 184 (268)
Q Consensus 108 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~ 184 (268)
.+++...+++.+..+.-.+ -.|..++.+ ++++++.|.|.--...++.++++..++.. +..++
T Consensus 121 ~~f~k~~I~~~Va~s~i~l--------------Reg~~~ff~~L~~~~IP~~iFSAGigdiiEev~~q~~~~~p-n~k~v 185 (298)
T KOG3128|consen 121 GGFSKNAIDDIVAESNIAL--------------REGYEEFFEALQAHEIPLLIFSAGIGDIIEEVTRQKLVLHP-NVKFV 185 (298)
T ss_pred CCcCHHHHHHHHHHhhHHH--------------HHHHHHHHHHHHhCCCceEEEecchHHHHHHHHHHHhccCc-cHHhh
Confidence 3455555555555444333 244555444 89999999999999999998886334332 33333
Q ss_pred cCC-----C----C----------CcHHHHHHHHhcCC--CCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCH
Q 024375 185 GLG-----T----G----------PKVNVLKQLQKKPE--HQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTP 243 (268)
Q Consensus 185 g~~-----~----~----------pkp~~l~~~~~~l~--~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~ 243 (268)
+.- . + .....+....+.+. ....++++-|||..|+.+|--+. .--+..-+.|+....
T Consensus 186 SN~~~F~edg~l~gF~~~Lihtfnkn~~v~~~~s~yf~~~~~~~nVillGdsigdl~ma~gv~--~~~~iLkig~l~d~v 263 (298)
T KOG3128|consen 186 SNYMDFDEDGNLCGFSQPLIHTFNKNSSVLQNESEYFHQLAGRVNVILLGDSIGDLHMADGVP--RVGHILKIGYLNDSV 263 (298)
T ss_pred hhhhhhcccchhhhhhHHHHHHHccchHHHHhhhHHHhhccCCceEEEeccccccchhhcCCc--ccccceeeecccchH
Confidence 210 0 0 11123333233322 34568999999999999876432 223345566676665
Q ss_pred HH-HHhcCCCCCeeec
Q 024375 244 KE-RAEAASMPRIQLL 258 (268)
Q Consensus 244 ~e-l~~~~~~P~~~~~ 258 (268)
++ ++...-.=|+++.
T Consensus 264 ee~~~~ymd~ydIvL~ 279 (298)
T KOG3128|consen 264 EEALEKYMDSYDIVLV 279 (298)
T ss_pred HHHHHHHHhhcceEEe
Confidence 54 3333323345543
No 289
>TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR. At least five distinct pathways exists for the catabolism of propionate by way of propionyl-CoA. Members of this family represent the transcriptional regulatory protein PrpR, whose gene is found in most cases divergently transcribed from an operon for the methylcitric acid cycle of propionate catabolism. 2-methylcitric acid, a catabolite by this pathway, is a coactivator of PrpR.
Probab=48.18 E-value=75 Score=31.50 Aligned_cols=83 Identities=13% Similarity=0.017 Sum_probs=48.2
Q ss_pred HHHHHH---hCCCcEEEEcCCchH-HHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhH
Q 024375 144 VSDALK---LASSRIYIVTSNQSR-FVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATL 219 (268)
Q Consensus 144 v~e~L~---~~g~~l~IvTnK~~~-~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di 219 (268)
|...|. ..+-+++||+-...- .++.+-. .++++...-.+... -+.+....-+++.|+. ++|||... .
T Consensus 86 il~al~~a~~~~~~ia~vg~~~~~~~~~~~~~-ll~~~i~~~~~~~~---~e~~~~~~~l~~~G~~----~viG~~~~-~ 156 (526)
T TIGR02329 86 VMQALARARRIASSIGVVTHQDTPPALRRFQA-AFNLDIVQRSYVTE---EDARSCVNDLRARGIG----AVVGAGLI-T 156 (526)
T ss_pred HHHHHHHHHhcCCcEEEEecCcccHHHHHHHH-HhCCceEEEEecCH---HHHHHHHHHHHHCCCC----EEECChHH-H
Confidence 555555 456689999865443 3444444 46665322222111 1233333334455776 99999966 5
Q ss_pred HHhhccCccCCCcEEEEecC
Q 024375 220 KNVIKEPELDGWNLYLVDWG 239 (268)
Q Consensus 220 ~aa~~~~~~agi~~i~v~wG 239 (268)
..|++ .|++.|.+.-|
T Consensus 157 ~~A~~----~gl~~ili~s~ 172 (526)
T TIGR02329 157 DLAEQ----AGLHGVFLYSA 172 (526)
T ss_pred HHHHH----cCCceEEEecH
Confidence 66776 79999998654
No 290
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=46.72 E-value=1e+02 Score=30.77 Aligned_cols=81 Identities=15% Similarity=0.033 Sum_probs=46.8
Q ss_pred HHHHHH---hCCCcEEEEcCCchH-HHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhH
Q 024375 144 VSDALK---LASSRIYIVTSNQSR-FVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATL 219 (268)
Q Consensus 144 v~e~L~---~~g~~l~IvTnK~~~-~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di 219 (268)
|...|. ..+-+++||+-...- .++.+-+ .++++.-.-.+... -+.+....-+++.|+. ++|||... .
T Consensus 96 il~al~~a~~~~~~iavv~~~~~~~~~~~~~~-~l~~~i~~~~~~~~---~e~~~~v~~lk~~G~~----~vvG~~~~-~ 166 (538)
T PRK15424 96 VMQALARARKLTSSIGVVTYQETIPALVAFQK-TFNLRIEQRSYVTE---EDARGQINELKANGIE----AVVGAGLI-T 166 (538)
T ss_pred HHHHHHHHHhcCCcEEEEecCcccHHHHHHHH-HhCCceEEEEecCH---HHHHHHHHHHHHCCCC----EEEcCchH-H
Confidence 555554 456688999865443 3444444 46665322222221 1233333445556777 89999876 6
Q ss_pred HHhhccCccCCCcEEEEe
Q 024375 220 KNVIKEPELDGWNLYLVD 237 (268)
Q Consensus 220 ~aa~~~~~~agi~~i~v~ 237 (268)
..|++ +|++.+...
T Consensus 167 ~~A~~----~g~~g~~~~ 180 (538)
T PRK15424 167 DLAEE----AGMTGIFIY 180 (538)
T ss_pred HHHHH----hCCceEEec
Confidence 77777 788888774
No 291
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=45.96 E-value=56 Score=25.97 Aligned_cols=47 Identities=19% Similarity=0.136 Sum_probs=34.0
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHH---------------HHHHHHHhcCCCCCCceEecC
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRF---------------VETLLRELAGVTITPDRLYGL 186 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~---------------~~~~L~~~~gl~~~f~~i~g~ 186 (268)
..+.+++.+.|+ ++|+.+.++|+.+... +...|++ +++. |-+.+.|.
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k-~~ip-Yd~l~~~k 87 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQ-HNVP-YDEIYVGK 87 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchhhHHHHHHHHHH-cCCC-CceEEeCC
Confidence 457789999997 7899999999998764 4566675 6763 32344454
No 292
>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]
Probab=45.74 E-value=8.4 Score=31.61 Aligned_cols=69 Identities=19% Similarity=0.197 Sum_probs=43.2
Q ss_pred CCCCccHHHHHH--hCCCcEEEEcCC--chHHH----HHHHHHhcCCCCCCceEecCCCC-CcHHHHHHHHhcCCCCCCc
Q 024375 138 NRLYPGVSDALK--LASSRIYIVTSN--QSRFV----ETLLRELAGVTITPDRLYGLGTG-PKVNVLKQLQKKPEHQGLR 208 (268)
Q Consensus 138 ~~lypGv~e~L~--~~g~~l~IvTnK--~~~~~----~~~L~~~~gl~~~f~~i~g~~~~-pkp~~l~~~~~~l~~~~~~ 208 (268)
...-|++.++++ -.-+.++|||.. ...++ +=+++. |-.-.|--.|+|+... -|.+
T Consensus 67 L~V~p~aq~v~keLt~~y~vYivtaamdhp~s~~dK~eWl~E~-FPFi~~qn~vfCgnKnivkaD--------------- 130 (180)
T COG4502 67 LGVQPFAQTVLKELTSIYNVYIVTAAMDHPKSCEDKGEWLKEK-FPFISYQNIVFCGNKNIVKAD--------------- 130 (180)
T ss_pred cCccccHHHHHHHHHhhheEEEEEeccCCchhHHHHHHHHHHH-CCCCChhhEEEecCCCeEEee---------------
Confidence 456799999998 577889999976 22222 334553 6555565667766522 1111
Q ss_pred EEEEcCcHhhHHHhh
Q 024375 209 LHFVEDRLATLKNVI 223 (268)
Q Consensus 209 ~~~VGDs~~Di~aa~ 223 (268)
++|.|.+..++.=+
T Consensus 131 -ilIDDnp~nLE~F~ 144 (180)
T COG4502 131 -ILIDDNPLNLENFK 144 (180)
T ss_pred -EEecCCchhhhhcc
Confidence 77778877776543
No 293
>COG0731 Fe-S oxidoreductases [Energy production and conversion]
Probab=44.88 E-value=52 Score=30.19 Aligned_cols=42 Identities=29% Similarity=0.592 Sum_probs=31.3
Q ss_pred cCCCCCccHHHHHH---hCC-CcEEEEcCCchHHHHHHHHHhcCCCCCCceEe
Q 024375 136 GANRLYPGVSDALK---LAS-SRIYIVTSNQSRFVETLLRELAGVTITPDRLY 184 (268)
Q Consensus 136 ~~~~lypGv~e~L~---~~g-~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~ 184 (268)
.+-+|||...|+++ +.| ++++||||-.. ..+++. +. .+|.++
T Consensus 89 GEPTLy~~L~elI~~~k~~g~~~tflvTNgsl---pdv~~~-L~---~~dql~ 134 (296)
T COG0731 89 GEPTLYPNLGELIEEIKKRGKKTTFLVTNGSL---PDVLEE-LK---LPDQLY 134 (296)
T ss_pred CCcccccCHHHHHHHHHhcCCceEEEEeCCCh---HHHHHH-hc---cCCEEE
Confidence 34689999999999 788 79999999998 445553 33 345555
No 294
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=43.84 E-value=44 Score=27.70 Aligned_cols=51 Identities=16% Similarity=0.302 Sum_probs=26.8
Q ss_pred HHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCcc--CCCcEEEEecCCCC
Q 024375 192 VNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPEL--DGWNLYLVDWGYNT 242 (268)
Q Consensus 192 p~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~--agi~~i~v~wGy~~ 242 (268)
++.+..+++...-...++.++|.+.-.++.+.+.=.. -|+.++++.-||.+
T Consensus 34 ~dl~~~l~~~~~~~~~~ifllG~~~~~~~~~~~~l~~~yP~l~ivg~~~g~f~ 86 (172)
T PF03808_consen 34 SDLFPDLLRRAEQRGKRIFLLGGSEEVLEKAAANLRRRYPGLRIVGYHHGYFD 86 (172)
T ss_pred HHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHHHCCCeEEEEecCCCCC
Confidence 4455555554444444666667666665543321111 15666666666654
No 295
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=43.69 E-value=12 Score=30.96 Aligned_cols=55 Identities=15% Similarity=0.234 Sum_probs=28.9
Q ss_pred EEcCCchHHHHHHHHHhcCCC---CCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEEEcCc
Q 024375 157 IVTSNQSRFVETLLRELAGVT---ITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDR 215 (268)
Q Consensus 157 IvTnK~~~~~~~~L~~~~gl~---~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~VGDs 215 (268)
+++-++.++=...|+. +--. .....+.|-.. ..-++.. -++.|++++++..||-.
T Consensus 94 vi~~~p~~fK~~~L~~-l~~~f~~~~~pf~agfGN-~~tDv~a--Y~~vGip~~rIF~I~~~ 151 (157)
T PF08235_consen 94 VISKDPEEFKIACLRD-LRALFPPDGNPFYAGFGN-RSTDVIA--YKAVGIPKSRIFIINPK 151 (157)
T ss_pred ccccChHHHHHHHHHH-HHHhcCCCCCeEEEecCC-cHHHHHH--HHHcCCChhhEEEECCC
Confidence 3456788877777774 3111 11122222221 1233332 23569999999998753
No 296
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=43.64 E-value=1e+02 Score=24.87 Aligned_cols=78 Identities=13% Similarity=0.104 Sum_probs=50.6
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCc-hHHHHHHHHHhcCCCCCC---------ceEe-cCCCCCcHHHHHHHHhcC
Q 024375 137 ANRLYPGVSDALK---LASSRIYIVTSNQ-SRFVETLLRELAGVTITP---------DRLY-GLGTGPKVNVLKQLQKKP 202 (268)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~l~IvTnK~-~~~~~~~L~~~~gl~~~f---------~~i~-g~~~~pkp~~l~~~~~~l 202 (268)
+...||.+...|. ++|+.++++|+.. ...+.+.|+. +.+..-+ +.+. |. +.|-..+.++-...
T Consensus 42 e~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~q~L~~-fkvk~~Gvlkps~e~ft~~~~g~--gsklghfke~~n~s 118 (144)
T KOG4549|consen 42 EMIFYDDIRRILVDLKKLGVTLIHASRTMAPQIASQGLET-FKVKQTGVLKPSLEEFTFEAVGD--GSKLGHFKEFTNNS 118 (144)
T ss_pred eeeeccchhHHHHHHHhcCcEEEEecCCCCHHHHHHHHHH-hccCcccccchhhhcCceeeecC--cccchhHHHHhhcc
Confidence 3568988888887 8999999999755 4678899995 8775422 2221 11 24445556665555
Q ss_pred CCCCCcEEEEcCcHh
Q 024375 203 EHQGLRLHFVEDRLA 217 (268)
Q Consensus 203 ~~~~~~~~~VGDs~~ 217 (268)
+..-.+..+..|-..
T Consensus 119 ~~~~k~~~~fdDesr 133 (144)
T KOG4549|consen 119 NSIEKNKQVFDDESR 133 (144)
T ss_pred Ccchhceeeeccccc
Confidence 665556666666543
No 297
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=42.85 E-value=1.1e+02 Score=27.96 Aligned_cols=85 Identities=16% Similarity=0.054 Sum_probs=50.4
Q ss_pred EEEEcCCchHHHHHHHHHhcCCCCCCceEecCCCCCc----HHHHHHHHhcC-CCCCCcEEEEcCcHhhHHHhhccCccC
Q 024375 155 IYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPK----VNVLKQLQKKP-EHQGLRLHFVEDRLATLKNVIKEPELD 229 (268)
Q Consensus 155 l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~~pk----p~~l~~~~~~l-~~~~~~~~~VGDs~~Di~aa~~~~~~a 229 (268)
..|+|+-.......+++. |++..-++..++...... ...+..+.+.+ ...|+=++..||+..-+.++.. +...
T Consensus 32 ~~~~tg~h~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDiv~~~gd~~~~la~a~a-a~~~ 109 (365)
T TIGR00236 32 YVIVTAQHREMLDQVLDL-FHLPPDYDLNIMSPGQTLGEITSNMLEGLEELLLEEKPDIVLVQGDTTTTLAGALA-AFYL 109 (365)
T ss_pred EEEEeCCCHHHHHHHHHh-cCCCCCeeeecCCCCCCHHHHHHHHHHHHHHHHHHcCCCEEEEeCCchHHHHHHHH-HHHh
Confidence 578888888889999986 998743444455421121 22222222222 2446667788998655443332 2337
Q ss_pred CCcEEEEecCCC
Q 024375 230 GWNLYLVDWGYN 241 (268)
Q Consensus 230 gi~~i~v~wGy~ 241 (268)
|+|++-+..|-.
T Consensus 110 ~ipv~h~~~g~~ 121 (365)
T TIGR00236 110 QIPVGHVEAGLR 121 (365)
T ss_pred CCCEEEEeCCCC
Confidence 999988766643
No 298
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=42.56 E-value=77 Score=27.91 Aligned_cols=45 Identities=20% Similarity=0.393 Sum_probs=32.6
Q ss_pred CCccHHHHHH---hCCCcEEEEcCCchHH---HHHHHHHhcCCCCCCceEec
Q 024375 140 LYPGVSDALK---LASSRIYIVTSNQSRF---VETLLRELAGVTITPDRLYG 185 (268)
Q Consensus 140 lypGv~e~L~---~~g~~l~IvTnK~~~~---~~~~L~~~~gl~~~f~~i~g 185 (268)
.-||..|.|+ .++.++-.|||...++ +..-|.+ +|++.--+-|++
T Consensus 24 avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~r-lgf~v~eeei~t 74 (262)
T KOG3040|consen 24 AVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQR-LGFDVSEEEIFT 74 (262)
T ss_pred cCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHH-hCCCccHHHhcC
Confidence 6799999999 5999999999966554 4445554 777655555554
No 299
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=40.10 E-value=15 Score=31.18 Aligned_cols=19 Identities=26% Similarity=0.177 Sum_probs=16.1
Q ss_pred cEEEEecCcccccChhHHH
Q 024375 3 DLYALDFDGVICDSCEETA 21 (268)
Q Consensus 3 ~~vlFDlDGTLvDS~~~i~ 21 (268)
++++||-||||..-.++++
T Consensus 6 k~lflDRDGtin~d~~~yv 24 (181)
T COG0241 6 KALFLDRDGTINIDKGDYV 24 (181)
T ss_pred cEEEEcCCCceecCCCccc
Confidence 6999999999998888633
No 300
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=39.90 E-value=48 Score=31.64 Aligned_cols=77 Identities=19% Similarity=0.288 Sum_probs=46.7
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchH------------HHHHHHHHhcCCCC-CCceEecCC-CCCcHHHHHHHHh
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSR------------FVETLLRELAGVTI-TPDRLYGLG-TGPKVNVLKQLQK 200 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~------------~~~~~L~~~~gl~~-~f~~i~g~~-~~pkp~~l~~~~~ 200 (268)
..+||-+..=|. +.||+++|.||+... -++.++.. +|+.. .+..++... .+|-.-+.....+
T Consensus 103 ~~l~~~vp~Klktl~~~g~~l~iftnq~~i~r~~~~~~~f~~Ki~~i~an-l~vPi~~~~A~~~~~yRKP~tGMwe~~~~ 181 (422)
T KOG2134|consen 103 RILFPEVPSKLKTLYQDGIKLFIFTNQNGIARGKLELEEFKKKIKAIVAN-LGVPIQLLAAIIKGKYRKPSTGMWEFLKR 181 (422)
T ss_pred eeeccccchhhhhhccCCeEEEEEecccccccCcchHHHHHHHHHHHHHh-cCCceEEeeeccCCcccCcchhHHHHHHH
Confidence 368888888887 899999999987543 34455664 55531 111222111 2366667776665
Q ss_pred cCC----CCCCcEEEEcCc
Q 024375 201 KPE----HQGLRLHFVEDR 215 (268)
Q Consensus 201 ~l~----~~~~~~~~VGDs 215 (268)
.++ +.-..+.||||.
T Consensus 182 ~~nd~~~Isek~s~fvgda 200 (422)
T KOG2134|consen 182 LENDSVEISEKASIFVGDA 200 (422)
T ss_pred Hhhccceeeechhhhhhhh
Confidence 443 344456799884
No 301
>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=39.77 E-value=18 Score=32.61 Aligned_cols=93 Identities=11% Similarity=0.006 Sum_probs=54.5
Q ss_pred CCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhcCC-CCCCceEecCCCC-CcHHHHHHHHhcCCCCCCcEEEEc
Q 024375 138 NRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGV-TITPDRLYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVE 213 (268)
Q Consensus 138 ~~lypGv~e~L~--~~g~~l~IvTnK~~~~~~~~L~~~~gl-~~~f~~i~g~~~~-pkp~~l~~~~~~l~~~~~~~~~VG 213 (268)
+.-.||+.++|+ .+-+.+.|-|.--+.++.+++.. +.- ...+..-+=.+.- -+.-..-+-+..+|.+-.++++|.
T Consensus 130 V~kRP~vdeFL~~~s~~~e~v~FTAs~~~Ya~~v~D~-LD~~~~i~~~RlyR~~C~~~~g~yvKdls~~~~dL~~viIiD 208 (262)
T KOG1605|consen 130 VRKRPHVDEFLSRVSKWYELVLFTASLEVYADPLLDI-LDPDRKIISHRLYRDSCTLKDGNYVKDLSVLGRDLSKVIIVD 208 (262)
T ss_pred EEcCCCHHHHHHHhHHHHHHHHHHhhhHHHHHHHHHH-ccCCCCeeeeeecccceEeECCcEEEEcceeccCcccEEEEc
Confidence 456788999998 56688888888888888888884 543 1112111111100 000001111234556667899999
Q ss_pred CcHhhHHHhhccCccCCCcEEE
Q 024375 214 DRLATLKNVIKEPELDGWNLYL 235 (268)
Q Consensus 214 Ds~~Di~aa~~~~~~agi~~i~ 235 (268)
|++.--..=-+ +|||+-.
T Consensus 209 NsP~sy~~~p~----NgIpI~s 226 (262)
T KOG1605|consen 209 NSPQSYRLQPE----NGIPIKS 226 (262)
T ss_pred CChHHhccCcc----CCCcccc
Confidence 99877654333 6777643
No 302
>PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis. CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ].
Probab=39.04 E-value=52 Score=27.81 Aligned_cols=40 Identities=13% Similarity=0.130 Sum_probs=31.0
Q ss_pred CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecC
Q 024375 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWG 239 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wG 239 (268)
..|+-+..++.... ++||.+.|-...|.. .|+|++++.|.
T Consensus 246 ~~~~~~~~~~~~~~------~~Is~RlH~~I~a~~----~g~P~i~i~y~ 285 (286)
T PF04230_consen 246 LSPDELLELISQAD------LVISMRLHGAILALS----LGVPVIAISYD 285 (286)
T ss_pred CCHHHHHHHHhcCC------EEEecCCHHHHHHHH----cCCCEEEEecC
Confidence 34555555555433 999999999999998 89999999885
No 303
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=39.00 E-value=24 Score=30.76 Aligned_cols=28 Identities=14% Similarity=0.216 Sum_probs=20.5
Q ss_pred EEEEecCcccccChhHHHHHHHHHHHHh
Q 024375 4 LYALDFDGVICDSCEETALSAVKAARVR 31 (268)
Q Consensus 4 ~vlFDlDGTLvDS~~~i~~s~~~a~~~~ 31 (268)
+++||-||||.-....+..-+...++++
T Consensus 13 l~lfdvdgtLt~~r~~~~~e~~~~l~~l 40 (252)
T KOG3189|consen 13 LCLFDVDGTLTPPRQKVTPEMLEFLQKL 40 (252)
T ss_pred EEEEecCCccccccccCCHHHHHHHHHH
Confidence 8999999999887765555555555554
No 304
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=38.78 E-value=21 Score=32.64 Aligned_cols=16 Identities=13% Similarity=0.295 Sum_probs=13.4
Q ss_pred CcEEEEecCcccccCh
Q 024375 2 EDLYALDFDGVICDSC 17 (268)
Q Consensus 2 ~~~vlFDlDGTLvDS~ 17 (268)
...|+||||-||+.+.
T Consensus 122 phVIVfDlD~TLItd~ 137 (297)
T PF05152_consen 122 PHVIVFDLDSTLITDE 137 (297)
T ss_pred CcEEEEECCCcccccC
Confidence 3689999999999664
No 305
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=38.69 E-value=20 Score=32.11 Aligned_cols=16 Identities=19% Similarity=0.335 Sum_probs=13.8
Q ss_pred cEEEEecCcccccChh
Q 024375 3 DLYALDFDGVICDSCE 18 (268)
Q Consensus 3 ~~vlFDlDGTLvDS~~ 18 (268)
++++||+||||.+...
T Consensus 159 ~~~~~D~dgtl~~~~~ 174 (300)
T PHA02530 159 KAVIFDIDGTLAKMGG 174 (300)
T ss_pred CEEEEECCCcCcCCCC
Confidence 5899999999999754
No 306
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=38.34 E-value=96 Score=28.89 Aligned_cols=89 Identities=13% Similarity=0.120 Sum_probs=53.5
Q ss_pred CCCCCccHHHHHHhCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCCCC---cH----H---HHHHHHhcCCCCC
Q 024375 137 ANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGP---KV----N---VLKQLQKKPEHQG 206 (268)
Q Consensus 137 ~~~lypGv~e~L~~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~~p---kp----~---~l~~~~~~l~~~~ 206 (268)
++.+|-++..-|+++|+.+ ++|......+..+|+. +|++. .++|..... |- . -+.++.+ ...|
T Consensus 12 hvhfFk~~I~eL~~~GheV-~it~R~~~~~~~LL~~-yg~~y---~~iG~~g~~~~~Kl~~~~~R~~~l~~~~~--~~~p 84 (335)
T PF04007_consen 12 HVHFFKNIIRELEKRGHEV-LITARDKDETEELLDL-YGIDY---IVIGKHGDSLYGKLLESIERQYKLLKLIK--KFKP 84 (335)
T ss_pred HHHHHHHHHHHHHhCCCEE-EEEEeccchHHHHHHH-cCCCe---EEEcCCCCCHHHHHHHHHHHHHHHHHHHH--hhCC
Confidence 3567888999999889875 5566666888999996 99752 356654221 11 1 1122222 2344
Q ss_pred CcEEEEcCcHhhH-HHhhccCccCCCcEEEEec
Q 024375 207 LRLHFVEDRLATL-KNVIKEPELDGWNLYLVDW 238 (268)
Q Consensus 207 ~~~~~VGDs~~Di-~aa~~~~~~agi~~i~v~w 238 (268)
+ ++|+=...+. ..|.- .|+|+|.+.=
T Consensus 85 D--v~is~~s~~a~~va~~----lgiP~I~f~D 111 (335)
T PF04007_consen 85 D--VAISFGSPEAARVAFG----LGIPSIVFND 111 (335)
T ss_pred C--EEEecCcHHHHHHHHH----hCCCeEEEec
Confidence 4 5554333333 35554 7999998854
No 307
>PF08620 RPAP1_C: RPAP1-like, C-terminal; InterPro: IPR013929 Inhibition of RNA polymerase II-associated protein 1 (RPAP1) synthesis in Saccharomyces cerevisiae (Baker's yeast) results in changes in global gene expression that are similar to those caused by the loss of the RNAPII subunit Rpb11 []. This entry represents the C-terminal region that contains the motif GLHHH. This region is conserved from yeast to humans.
Probab=37.28 E-value=12 Score=26.99 Aligned_cols=10 Identities=40% Similarity=0.783 Sum_probs=8.7
Q ss_pred EEEecCcccc
Q 024375 5 YALDFDGVIC 14 (268)
Q Consensus 5 vlFDlDGTLv 14 (268)
+=|||+|.|+
T Consensus 3 ~RFdf~G~l~ 12 (73)
T PF08620_consen 3 LRFDFDGNLL 12 (73)
T ss_pred ccccCCCCEe
Confidence 3499999999
No 308
>TIGR01286 nifK nitrogenase molybdenum-iron protein beta chain. This model represents the majority of known sequences of the nitrogenase molybdenum-iron protein beta subunit. A distinct clade in a phylogenetic tree contains molybdenum-iron, vanadium-iron, and iron-iron forms of nitrogenase beta subunit and is excluded from this model. Nitrogenase, also called dinitrogenase, is responsible for nitrogen fixation. Note: the trusted cutoff score has recently been lowered to include an additional family in which the beta subunit is shorter by about 50 amino acids at the N-terminus. In species with the shorter form of the beta subunit, the alpha subunit has a novel insert of similar length.
Probab=36.80 E-value=3.4e+02 Score=26.88 Aligned_cols=37 Identities=8% Similarity=-0.057 Sum_probs=25.3
Q ss_pred cHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEE
Q 024375 191 KVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLV 236 (268)
Q Consensus 191 kp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v 236 (268)
+..-++.++.+.+.+ ++||.|.. -..|++ .|+|++-+
T Consensus 425 Dl~~l~~~l~~~~~D----lliG~s~~-k~~a~~----~giPlir~ 461 (515)
T TIGR01286 425 DLWHLRSLVFTEPVD----FLIGNSYG-KYIQRD----TLVPLIRI 461 (515)
T ss_pred CHHHHHHHHhhcCCC----EEEECchH-HHHHHH----cCCCEEEe
Confidence 455566666665544 99999954 555666 79998755
No 309
>PRK13762 tRNA-modifying enzyme; Provisional
Probab=36.21 E-value=87 Score=28.90 Aligned_cols=29 Identities=21% Similarity=0.423 Sum_probs=23.9
Q ss_pred cCCCCCccHHHHHH---hCCCcEEEEcCCchH
Q 024375 136 GANRLYPGVSDALK---LASSRIYIVTSNQSR 164 (268)
Q Consensus 136 ~~~~lypGv~e~L~---~~g~~l~IvTnK~~~ 164 (268)
.+..+||.+.++++ ++|+.++|.||-...
T Consensus 139 GEPlL~p~l~eli~~~k~~Gi~~~L~TNG~~~ 170 (322)
T PRK13762 139 GEPTLYPYLPELIEEFHKRGFTTFLVTNGTRP 170 (322)
T ss_pred ccccchhhHHHHHHHHHHcCCCEEEECCCCCH
Confidence 34558899999998 789999999998653
No 310
>COG1058 CinA Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA [General function prediction only]
Probab=35.79 E-value=65 Score=28.91 Aligned_cols=53 Identities=11% Similarity=0.103 Sum_probs=45.6
Q ss_pred CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCH
Q 024375 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTP 243 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~ 243 (268)
.+..-|.+-|..+|++-.+...|||...+|..+.+..... .++|-++-|-|..
T Consensus 21 tNa~~la~~L~~~G~~v~~~~~VgD~~~~I~~~l~~a~~r-~D~vI~tGGLGPT 73 (255)
T COG1058 21 TNAAFLADELTELGVDLARITTVGDNPDRIVEALREASER-ADVVITTGGLGPT 73 (255)
T ss_pred chHHHHHHHHHhcCceEEEEEecCCCHHHHHHHHHHHHhC-CCEEEECCCcCCC
Confidence 7788888888899999999999999999999988776654 8999999998754
No 311
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=35.72 E-value=3.7e+02 Score=25.86 Aligned_cols=93 Identities=8% Similarity=-0.008 Sum_probs=56.8
Q ss_pred hCCCcEEEEcCC---------chHHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHH
Q 024375 150 LASSRIYIVTSN---------QSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLK 220 (268)
Q Consensus 150 ~~g~~l~IvTnK---------~~~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~ 220 (268)
++|+++..++-. ....+..+.+. +.-.... .|+..+ .+ +.-+..++..+. ++||=+.|-..
T Consensus 271 ~~g~~Vv~lp~~~~~~~~~~dD~~~~~~l~~~-~~~~~~~-~vi~~~-~~-~~e~~~iIs~~d------l~ig~RlHa~I 340 (426)
T PRK10017 271 DEGYQVIALSTCTGIDSYNKDDRMVALNLRQH-VSDPARY-HVVMDE-LN-DLEMGKILGACE------LTVGTRLHSAI 340 (426)
T ss_pred HCCCeEEEEecccCccCCCCchHHHHHHHHHh-cccccce-eEecCC-CC-hHHHHHHHhhCC------EEEEecchHHH
Confidence 679988877732 23345666664 4411111 233322 12 333445555433 89999999999
Q ss_pred HhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeee
Q 024375 221 NVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQL 257 (268)
Q Consensus 221 aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~ 257 (268)
.|.. +|+|++++.|..-...-+...+ -|++++
T Consensus 341 ~a~~----~gvP~i~i~Y~~K~~~~~~~lg-~~~~~~ 372 (426)
T PRK10017 341 ISMN----FGTPAIAINYEHKSAGIMQQLG-LPEMAI 372 (426)
T ss_pred HHHH----cCCCEEEeeehHHHHHHHHHcC-CccEEe
Confidence 9987 8999999999765555555555 355543
No 312
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=35.43 E-value=2.1e+02 Score=27.86 Aligned_cols=85 Identities=16% Similarity=0.125 Sum_probs=59.0
Q ss_pred CCCCC-ccHHHHHH----hCCCcEEEE-cC-CchHHHHHHHHHhcCCCCCCceEecCCCC---CcHHHHHHHHhcC-CCC
Q 024375 137 ANRLY-PGVSDALK----LASSRIYIV-TS-NQSRFVETLLRELAGVTITPDRLYGLGTG---PKVNVLKQLQKKP-EHQ 205 (268)
Q Consensus 137 ~~~ly-pGv~e~L~----~~g~~l~Iv-Tn-K~~~~~~~~L~~~~gl~~~f~~i~g~~~~---pkp~~l~~~~~~l-~~~ 205 (268)
-+..| |++.|-|+ +-|++.+=. ++ +|-+.+++-|++ +.... +|.|+-...+ -+.+.+.++.+-- -+.
T Consensus 135 aaD~~RpAA~eQL~~La~q~~v~~f~~~~~~~Pv~Iak~al~~-ak~~~-~DvvIvDTAGRl~ide~Lm~El~~Ik~~~~ 212 (451)
T COG0541 135 AADTYRPAAIEQLKQLAEQVGVPFFGSGTEKDPVEIAKAALEK-AKEEG-YDVVIVDTAGRLHIDEELMDELKEIKEVIN 212 (451)
T ss_pred ecccCChHHHHHHHHHHHHcCCceecCCCCCCHHHHHHHHHHH-HHHcC-CCEEEEeCCCcccccHHHHHHHHHHHhhcC
Confidence 34555 99999998 577776654 44 477788999985 76544 6877754333 5667777765533 368
Q ss_pred CCcEEEEcCcHhhHHHhh
Q 024375 206 GLRLHFVEDRLATLKNVI 223 (268)
Q Consensus 206 ~~~~~~VGDs~~Di~aa~ 223 (268)
|+|++||=|+...-.|+.
T Consensus 213 P~E~llVvDam~GQdA~~ 230 (451)
T COG0541 213 PDETLLVVDAMIGQDAVN 230 (451)
T ss_pred CCeEEEEEecccchHHHH
Confidence 999999999887665544
No 313
>PTZ00445 p36-lilke protein; Provisional
Probab=35.18 E-value=17 Score=31.84 Aligned_cols=14 Identities=29% Similarity=0.301 Sum_probs=12.8
Q ss_pred CcEEEEecCccccc
Q 024375 2 EDLYALDFDGVICD 15 (268)
Q Consensus 2 ~~~vlFDlDGTLvD 15 (268)
.++|++|||=||++
T Consensus 43 Ik~Va~D~DnTlI~ 56 (219)
T PTZ00445 43 IKVIASDFDLTMIT 56 (219)
T ss_pred CeEEEecchhhhhh
Confidence 37999999999999
No 314
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=35.14 E-value=21 Score=30.00 Aligned_cols=12 Identities=25% Similarity=0.357 Sum_probs=11.3
Q ss_pred cEEEEecCcccc
Q 024375 3 DLYALDFDGVIC 14 (268)
Q Consensus 3 ~~vlFDlDGTLv 14 (268)
+.|++|||-|||
T Consensus 29 kgvi~DlDNTLv 40 (175)
T COG2179 29 KGVILDLDNTLV 40 (175)
T ss_pred cEEEEeccCcee
Confidence 789999999998
No 315
>cd08199 EEVS 2-epi-5-epi-valiolone synthase (EEVS). 2-epi-5-epi-valiolone synthases catalyze the cyclization of sedoheptulose 7-phosphate to 2-epi-5-epi-valiolone in the biosynthesis of C(7)N-aminocyclitol-containing products. The cyclization product, 2-epi-5-epi-valiolone ((2S,3S,4S,5R)-5-(hydroxymethyl)cyclohexanon-2,3,4,5-tetrol), is a precursor of the valienamine moiety. The valienamine unit is responsible for their biological activities as various glycosidic hydrolases inhibitors. Two important microbial secondary metabolites, i.e., validamycin and acarbose, are used in agricultural and biomedical applications. Validamycine A is an antifungal antibiotic which has a strong trehalase inhibitory activity and has been used to control sheath blight disease in rice caused by Rhizoctonia solani. Acarbose is an alpha-glucosidase inhibitor used for the treatment of type II insulin-independent diabetes. Salbostatin produced by Streptomyces albus also belongs to this family. It exhibits s
Probab=35.06 E-value=2.2e+02 Score=26.58 Aligned_cols=97 Identities=7% Similarity=0.014 Sum_probs=51.8
Q ss_pred CCccHHHHHH-h---CCCcEEEEcCCchH-----HHHHHHHHhcCCCCCCceEe-cCCCCCcHHHHHHHHh---cCCCCC
Q 024375 140 LYPGVSDALK-L---ASSRIYIVTSNQSR-----FVETLLRELAGVTITPDRLY-GLGTGPKVNVLKQLQK---KPEHQG 206 (268)
Q Consensus 140 lypGv~e~L~-~---~g~~l~IvTnK~~~-----~~~~~L~~~~gl~~~f~~i~-g~~~~pkp~~l~~~~~---~l~~~~ 206 (268)
+|....+.+. . ...+..|+|.+.-. .+...|+. .|+. +...++ +.+..|.-+.+.++++ +.+.+.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~lvVtd~~v~~~~~~~v~~~l~~-~g~~-~~~~v~~~~e~~~s~~~v~~~~~~l~~~~~~r 87 (354)
T cd08199 10 LLDPSNPLLLDVYLEGSGRRFVVVDQNVDKLYGKKLREYFAH-HNIP-LTILVLRAGEAAKTMDTVLKIVDALDAFGISR 87 (354)
T ss_pred ccccchHHHHHhhccCCCeEEEEECccHHHHHHHHHHHHHHh-cCCc-eEEEEeCCCCCCCCHHHHHHHHHHHHHcCCCC
Confidence 3444445555 2 34678888876432 23344443 4543 112233 3333355566665554 345554
Q ss_pred C-cEE-EEcC-cHhhHHHhhccCccCCCcEEEEec
Q 024375 207 L-RLH-FVED-RLATLKNVIKEPELDGWNLYLVDW 238 (268)
Q Consensus 207 ~-~~~-~VGD-s~~Di~aa~~~~~~agi~~i~v~w 238 (268)
+ .++ -||. +..|+-.+.++-...|+|+|.|..
T Consensus 88 ~~d~IVaiGGG~v~D~ak~~A~~~~rg~p~i~VPT 122 (354)
T cd08199 88 RREPVLAIGGGVLTDVAGLAASLYRRGTPYVRIPT 122 (354)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHhcCCCCEEEEcC
Confidence 4 444 4877 788887665422235888777765
No 316
>PRK10076 pyruvate formate lyase II activase; Provisional
Probab=34.89 E-value=1.2e+02 Score=26.13 Aligned_cols=62 Identities=16% Similarity=-0.047 Sum_probs=39.0
Q ss_pred CCHHHHHHHHHHHHHHhhhccc--cccccCCCCCcc-HHHHHH---hCCCcEEEEcCC--chHHHHHHHH
Q 024375 110 ENREALIELSGKVRDEWMDTDF--TTWIGANRLYPG-VSDALK---LASSRIYIVTSN--QSRFVETLLR 171 (268)
Q Consensus 110 ~~~~~~~~~~~~~r~~~~~~~~--~~~~~~~~lypG-v~e~L~---~~g~~l~IvTnK--~~~~~~~~L~ 171 (268)
++.+++.+.+.+.+.+|..... -.--.+..+++. +.++++ ++|+.++|.||- +.+..+.++.
T Consensus 19 ~t~eel~~~~~~~~~f~~~sggGVt~SGGEPllq~~fl~~l~~~~k~~gi~~~leTnG~~~~~~~~~l~~ 88 (213)
T PRK10076 19 ITLDALEREVMKDDIFFRTSGGGVTLSGGEVLMQAEFATRFLQRLRLWGVSCAIETAGDAPASKLLPLAK 88 (213)
T ss_pred cCHHHHHHHHHhhhHhhcCCCCEEEEeCchHHcCHHHHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHHH
Confidence 4566666666667766643200 000122346666 678888 799999999997 5556666666
No 317
>TIGR03278 methan_mark_10 putative methanogenesis marker protein 10. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The presence of motifs with seven invariant Cys residues in the N-terminal 50 residues, including three instances of CXXC, would be consistent with function as an oxidoreductase with FeS clusters. The exact function is unknown, but likely is linked to methanogenesis. In most genomes, the member of this family is encoded by a gene next to, and divergently transcribed from, the methyl coenzyme M reductase operon.
Probab=34.14 E-value=2.2e+02 Score=27.25 Aligned_cols=66 Identities=20% Similarity=0.133 Sum_probs=41.3
Q ss_pred CHHHHHHHHHHHHHHhhhcc-cccc--ccCCCCCccHHHHHH---hCCCcEEEE-cCC----chHHHHHHHHHhcCCCC
Q 024375 111 NREALIELSGKVRDEWMDTD-FTTW--IGANRLYPGVSDALK---LASSRIYIV-TSN----QSRFVETLLRELAGVTI 178 (268)
Q Consensus 111 ~~~~~~~~~~~~r~~~~~~~-~~~~--~~~~~lypGv~e~L~---~~g~~l~Iv-TnK----~~~~~~~~L~~~~gl~~ 178 (268)
+.+++.+.+.+...+|.... .-.. -.....||.+.++|+ +.|++++|. ||- ..+.++++++ +|++.
T Consensus 55 t~~evl~ev~~d~~~~~~~~ggVtisGGGepl~~~~l~eLl~~lk~~gi~taI~~TnG~~l~~~e~~~~L~~--~gld~ 131 (404)
T TIGR03278 55 PPQVVLGEVQTSLGFRTGRDTKVTISGGGDVSCYPELEELTKGLSDLGLPIHLGYTSGKGFDDPEIAEFLID--NGVRE 131 (404)
T ss_pred CHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCHHHHHHHHHHHhCCCCEEEeCCCCcccCCHHHHHHHHH--cCCCE
Confidence 55666666666666653221 0011 112457899999999 679999996 883 4556777766 57764
No 318
>PF04028 DUF374: Domain of unknown function (DUF374); InterPro: IPR007172 This is a bacterial domain of unknown function.
Probab=33.45 E-value=1.8e+02 Score=20.81 Aligned_cols=55 Identities=13% Similarity=0.295 Sum_probs=38.6
Q ss_pred EEEcCCchHHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEEEcCcH
Q 024375 156 YIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRL 216 (268)
Q Consensus 156 ~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~VGDs~ 216 (268)
.|--++.-+.+-.+++. +|+ ..|-|+..+--...+.++++.+. +...+.+.=|.+
T Consensus 15 lvS~s~DGe~ia~~~~~-~G~----~~iRGSs~rgg~~Alr~~~~~lk-~G~~~~itpDGP 69 (74)
T PF04028_consen 15 LVSRSRDGELIARVLER-FGF----RTIRGSSSRGGARALREMLRALK-EGYSIAITPDGP 69 (74)
T ss_pred EEccCcCHHHHHHHHHH-cCC----CeEEeCCCCcHHHHHHHHHHHHH-CCCeEEEeCCCC
Confidence 33337888999999995 995 68889877666667777777665 334566666654
No 319
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=32.95 E-value=3.2e+02 Score=24.69 Aligned_cols=89 Identities=16% Similarity=0.126 Sum_probs=57.5
Q ss_pred cccCCCCCccHHHHHH------h--CCCcEEEEcCCchHHHHHH---HHHhcCCCCCCceEecCCCCCcHHHHHHHHhcC
Q 024375 134 WIGANRLYPGVSDALK------L--ASSRIYIVTSNQSRFVETL---LRELAGVTITPDRLYGLGTGPKVNVLKQLQKKP 202 (268)
Q Consensus 134 ~~~~~~lypGv~e~L~------~--~g~~l~IvTnK~~~~~~~~---L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l 202 (268)
.+..-.-||=|..+|. + .-+-+.|.|..+.+.-.++ ++ |+||+.- -.++++.. .|-. -++.+
T Consensus 10 ~L~~G~aFp~vk~Ll~lN~~~~~e~~~VEVVllSRNspdTGlRv~nSI~-hygL~It-R~~ft~G~--~~~~---Yl~af 82 (264)
T PF06189_consen 10 PLKPGVAFPFVKALLALNDLLPEEDPLVEVVLLSRNSPDTGLRVFNSIR-HYGLDIT-RAAFTGGE--SPYP---YLKAF 82 (264)
T ss_pred CCCCCCchHHHHHHHHhhccccccCCceEEEEEecCCHHHHHHHHHhHH-HhCCcce-eeeecCCC--CHHH---HHHHh
Confidence 3455577888888888 1 3466888998877766665 45 4788643 22332221 2222 34455
Q ss_pred CCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEe
Q 024375 203 EHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVD 237 (268)
Q Consensus 203 ~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~ 237 (268)
+++ +|.==...|++.|.+ +|++...|.
T Consensus 83 ~v~----LFLSan~~DV~~Ai~----~G~~Aa~v~ 109 (264)
T PF06189_consen 83 NVD----LFLSANEDDVQEAID----AGIPAATVL 109 (264)
T ss_pred CCc----eEeeCCHHHHHHHHH----cCCCcEEee
Confidence 666 888888899999998 666666553
No 320
>COG1927 Mtd Coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase [Energy production and conversion]
Probab=32.84 E-value=2.6e+02 Score=24.60 Aligned_cols=61 Identities=11% Similarity=0.080 Sum_probs=38.1
Q ss_pred hCCCcEEEEcCCc-------hHHHHHHHHHhcCCCCCCceEecCCCC-CcHHHHHHHHhcCCCCCCcEEEEcCcH
Q 024375 150 LASSRIYIVTSNQ-------SRFVETLLRELAGVTITPDRLYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVEDRL 216 (268)
Q Consensus 150 ~~g~~l~IvTnK~-------~~~~~~~L~~~~gl~~~f~~i~g~~~~-pkp~~l~~~~~~l~~~~~~~~~VGDs~ 216 (268)
..++.+-|+++-. +..+..+++. +.-+ |-..+|.... |-|.--+++++.-+.+ ++.|||.+
T Consensus 29 Redi~vrVvgsgaKM~Pe~veaav~~~~e~-~~pD--fvi~isPNpaaPGP~kARE~l~~s~~P---aiiigDaP 97 (277)
T COG1927 29 REDIEVRVVGSGAKMDPECVEAAVTEMLEE-FNPD--FVIYISPNPAAPGPKKAREILSDSDVP---AIIIGDAP 97 (277)
T ss_pred cCCceEEEeccccccChHHHHHHHHHHHHh-cCCC--EEEEeCCCCCCCCchHHHHHHhhcCCC---EEEecCCc
Confidence 5788888888632 2334455664 4322 3333344433 7777778888776665 79999997
No 321
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=31.85 E-value=26 Score=34.02 Aligned_cols=16 Identities=31% Similarity=0.447 Sum_probs=13.3
Q ss_pred CcEEEEecCcccccCh
Q 024375 2 EDLYALDFDGVICDSC 17 (268)
Q Consensus 2 ~~~vlFDlDGTLvDS~ 17 (268)
.+.|+||+||||.-|-
T Consensus 375 ~kiVVsDiDGTITkSD 390 (580)
T COG5083 375 KKIVVSDIDGTITKSD 390 (580)
T ss_pred CcEEEEecCCcEEehh
Confidence 3789999999997663
No 322
>COG4483 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=31.55 E-value=41 Score=23.69 Aligned_cols=25 Identities=24% Similarity=0.228 Sum_probs=19.0
Q ss_pred HHHHHhcCCCCCCcEEEEcCcHhhHHHhh
Q 024375 195 LKQLQKKPEHQGLRLHFVEDRLATLKNVI 223 (268)
Q Consensus 195 l~~~~~~l~~~~~~~~~VGDs~~Di~aa~ 223 (268)
+.+++++.|+- +|+||+..||+.-+
T Consensus 7 VqQlLK~~G~i----vyfg~r~~~iemm~ 31 (68)
T COG4483 7 VQQLLKKFGII----VYFGKRLYDIEMMQ 31 (68)
T ss_pred HHHHHHHCCee----eecCCHHHHHHHHH
Confidence 45677777764 89999999988654
No 323
>cd08175 G1PDH Glycerol-1-phosphate dehydrogenase (G1PDH) catalyzes the reversible reduction of dihydroxyacetone phosphate (DHAP) to glycerol-1-phosphate (G1P) in an NADH-dependent manner. Glycerol-1-phosphate dehydrogenase (G1PDH) plays a role in the synthesis of phosphoglycerolipids in Gram-positive bacterial species. It catalyzes the reversibly reduction of dihydroxyacetone phosphate (DHAP) to glycerol-1-phosphate (G1P) in a NADH-dependent manner. Its activity requires a Ni++ ion. In Bacillus subtilis, it has been described as AraM gene in L-arabinose (ara) operon. AraM protein forms homodimer. This family is bacteria specific.
Probab=31.45 E-value=2.5e+02 Score=25.89 Aligned_cols=88 Identities=18% Similarity=0.143 Sum_probs=48.7
Q ss_pred HHHHhCC-CcEEEEcCCchH-----HHHHHHHHhcCCCCCCceEecC--CCCCcHHHHHHHHhcCCCCCCcEEEEcC-cH
Q 024375 146 DALKLAS-SRIYIVTSNQSR-----FVETLLRELAGVTITPDRLYGL--GTGPKVNVLKQLQKKPEHQGLRLHFVED-RL 216 (268)
Q Consensus 146 e~L~~~g-~~l~IvTnK~~~-----~~~~~L~~~~gl~~~f~~i~g~--~~~pkp~~l~~~~~~l~~~~~~~~~VGD-s~ 216 (268)
+.+.+.| .+..|+|.+... .+...|++ .|+.. ..+... +..|..+.+.++.+.+.-..+-+|-||= |.
T Consensus 16 ~~~~~~~~~~~livtd~~~~~~~~~~v~~~l~~-~~i~~--~~~~~~~~~~~pt~~~v~~~~~~~~~~~d~IIaIGGGs~ 92 (348)
T cd08175 16 EILKEFGYKKALIVADENTYAAAGKKVEALLKR-AGVVV--LLIVLPAGDLIADEKAVGRVLKELERDTDLIIAVGSGTI 92 (348)
T ss_pred HHHHhcCCCcEEEEECCcHHHHHHHHHHHHHHH-CCCee--EEeecCCCcccCCHHHHHHHHHHhhccCCEEEEECCcHH
Confidence 3344344 568888876432 23445554 56632 111122 2236777777777665334555666765 66
Q ss_pred hhHHHhhccCccCCCcEEEEec
Q 024375 217 ATLKNVIKEPELDGWNLYLVDW 238 (268)
Q Consensus 217 ~Di~aa~~~~~~agi~~i~v~w 238 (268)
.|+-.+.+ ...|+|+|.|..
T Consensus 93 ~D~aK~vA--~~~~~p~i~IPT 112 (348)
T cd08175 93 NDITKYVS--YKTGIPYISVPT 112 (348)
T ss_pred HHHHHHHH--HhcCCCEEEecC
Confidence 77654443 335788888764
No 324
>cd06533 Glyco_transf_WecG_TagA The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins. E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common antigen (eca) synthesis. B. subtilis TagA plays a key role in the Wall Teichoic Acid (WTA) biosynthetic pathway, catalyzing the transfer of N-acetylmannosamine to the C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid to make ManNAc-beta-(1,4)-GlcNAc-pp-undecaprenyl. This is the first committed step in this pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.
Probab=31.06 E-value=1.4e+02 Score=24.62 Aligned_cols=53 Identities=17% Similarity=0.350 Sum_probs=28.7
Q ss_pred HHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccC--ccCCCcEEEEecCCCCHH
Q 024375 192 VNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEP--ELDGWNLYLVDWGYNTPK 244 (268)
Q Consensus 192 p~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~--~~agi~~i~v~wGy~~~~ 244 (268)
++.+..+++...-...++.++|.+.--+..+.+.- .--|+.+++..-||...+
T Consensus 32 ~dl~~~ll~~~~~~~~~v~llG~~~~~~~~~~~~l~~~yp~l~i~g~~~g~~~~~ 86 (171)
T cd06533 32 SDLMPALLELAAQKGLRVFLLGAKPEVLEKAAERLRARYPGLKIVGYHHGYFGPE 86 (171)
T ss_pred HHHHHHHHHHHHHcCCeEEEECCCHHHHHHHHHHHHHHCCCcEEEEecCCCCChh
Confidence 45566666555544556667777766666543100 002566666666665543
No 325
>PF02593 dTMP_synthase: Thymidylate synthase; InterPro: IPR003745 This entry describes proteins of unknown function.
Probab=30.20 E-value=60 Score=28.42 Aligned_cols=82 Identities=13% Similarity=0.178 Sum_probs=55.0
Q ss_pred CCCccHHHHH-H---hCCCcEEEEcCCchH-----HHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcE
Q 024375 139 RLYPGVSDAL-K---LASSRIYIVTSNQSR-----FVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRL 209 (268)
Q Consensus 139 ~lypGv~e~L-~---~~g~~l~IvTnK~~~-----~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~ 209 (268)
.+.|.+.-.| + +.|++-.|+.+.... ..++.++. +|+...|..+.|+-.+.+-..+.+.++..|-+.=++
T Consensus 59 ~lHPDl~~~l~~~~~e~g~kavIvp~~~~~~g~~~~lk~~~e~-~gi~~~~P~~~CsL~~~~~p~i~~F~~~fGkP~~ei 137 (217)
T PF02593_consen 59 GLHPDLTYELPEIAKEAGVKAVIVPSESPKPGLRRQLKKQLEE-FGIEVEFPKPFCSLEENGNPQIDEFAEYFGKPKVEI 137 (217)
T ss_pred ccCchhHHHHHHHHHHcCCCEEEEecCCCccchHHHHHHHHHh-cCceeecCccccccCCCCChhHHHHHHHhCCceEEE
Confidence 5677776333 3 589999999987777 88899996 999888888887643333344566666677554444
Q ss_pred EEEcCcHhhHHH
Q 024375 210 HFVEDRLATLKN 221 (268)
Q Consensus 210 ~~VGDs~~Di~a 221 (268)
.+=+|...|++-
T Consensus 138 ~v~~~~I~~V~V 149 (217)
T PF02593_consen 138 EVENGKIKDVKV 149 (217)
T ss_pred EecCCcEEEEEE
Confidence 444445555443
No 326
>PLN02887 hydrolase family protein
Probab=30.10 E-value=1.1e+02 Score=30.83 Aligned_cols=38 Identities=18% Similarity=0.232 Sum_probs=32.9
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCC
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVT 177 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~ 177 (268)
.+-|...+.|+ ++|++++|+|+.+...+..+++. +++.
T Consensus 325 ~Is~~t~eAI~kl~ekGi~~vIATGR~~~~i~~~l~~-L~l~ 365 (580)
T PLN02887 325 QISETNAKALKEALSRGVKVVIATGKARPAVIDILKM-VDLA 365 (580)
T ss_pred ccCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-hCcc
Confidence 45677788887 79999999999999999999996 8875
No 327
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=29.98 E-value=60 Score=28.02 Aligned_cols=26 Identities=19% Similarity=0.270 Sum_probs=13.3
Q ss_pred EEecCcccccChh-----HHHHHHHHHHHHh
Q 024375 6 ALDFDGVICDSCE-----ETALSAVKAARVR 31 (268)
Q Consensus 6 lFDlDGTLvDS~~-----~i~~s~~~a~~~~ 31 (268)
+|||||||++-.+ -....+..+|+++
T Consensus 1 ~lDyDGTL~p~~~~p~~~~~~~~~~~~L~~L 31 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDPDAAVPPPELRELLRAL 31 (235)
T ss_dssp EEE-TTTSS---S-GGG----HHHHHHHHHH
T ss_pred CcccCCccCCCCCCccccCCCHHHHHHHHHH
Confidence 6899999998775 2233445555555
No 328
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=29.45 E-value=2e+02 Score=31.24 Aligned_cols=82 Identities=15% Similarity=0.136 Sum_probs=54.7
Q ss_pred hCCCcEEEEcC-----CchHHHHHHHHHhcCCCCCCceEecCC-C-------C-CcHHHHHHHHhcCCCCCCcE-EEEcC
Q 024375 150 LASSRIYIVTS-----NQSRFVETLLRELAGVTITPDRLYGLG-T-------G-PKVNVLKQLQKKPEHQGLRL-HFVED 214 (268)
Q Consensus 150 ~~g~~l~IvTn-----K~~~~~~~~L~~~~gl~~~f~~i~g~~-~-------~-pkp~~l~~~~~~l~~~~~~~-~~VGD 214 (268)
+.-+++.-... .+-..+++.|+. .|+.- ..|++.+ . . .|...|+.+..++|++.+++ ||+||
T Consensus 905 q~~~k~SY~v~d~~~~~~v~elr~~Lr~-~gLr~--~~iys~~~~~LDVlP~~ASKgqAlRyL~~rwgi~l~~v~VfaGd 981 (1050)
T TIGR02468 905 STDHCYAFKVKDPSKVPPVKELRKLLRI-QGLRC--HAVYCRNGTRLNVIPLLASRSQALRYLFVRWGIELANMAVFVGE 981 (1050)
T ss_pred CCCceEEEEecCcccCccHHHHHHHHHh-CCCce--EEEeecCCcEeeeeeCCCCHHHHHHHHHHHcCCChHHeEEEecc
Confidence 34566666422 234678888885 78753 3455543 1 1 68999999999999999998 67999
Q ss_pred cHh-hHHHhhccCccCCCcEEEEecC
Q 024375 215 RLA-TLKNVIKEPELDGWNLYLVDWG 239 (268)
Q Consensus 215 s~~-Di~aa~~~~~~agi~~i~v~wG 239 (268)
|-+ |.+.=. .|+.---|.=|
T Consensus 982 SGntD~e~Ll-----~G~~~tvi~~g 1002 (1050)
T TIGR02468 982 SGDTDYEGLL-----GGLHKTVILKG 1002 (1050)
T ss_pred CCCCCHHHHh-----CCceeEEEEec
Confidence 999 954333 34444445555
No 329
>COG2121 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=29.12 E-value=3.4e+02 Score=23.72 Aligned_cols=77 Identities=19% Similarity=0.256 Sum_probs=48.8
Q ss_pred EEEEc-CCchHHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEEEcCcHh---------hHHHhhc
Q 024375 155 IYIVT-SNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLA---------TLKNVIK 224 (268)
Q Consensus 155 l~IvT-nK~~~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~---------Di~aa~~ 224 (268)
.+++| ++.-+.+.+++++ ||+ ..|-|+..|.-...+..+++.|. +-.+++|.=|.+. =+.-|+.
T Consensus 71 ~amvS~s~DGEliA~~l~k-fG~----~~IRGSs~Kgg~~Alr~l~k~Lk-~G~~i~itpDgPkGp~~~~~~Gii~LA~~ 144 (214)
T COG2121 71 YAMVSPSRDGELIARLLEK-FGL----RVIRGSSNKGGISALRALLKALK-QGKSIAITPDGPKGPVHKIGDGIIALAQK 144 (214)
T ss_pred EEEEcCCcCHHHHHHHHHH-cCc----eEEeccCCcchHHHHHHHHHHHh-CCCcEEEcCCCCCCCceeccchhhHhhHh
Confidence 45555 6888999999997 995 68889876544444555555442 1233555555544 1344565
Q ss_pred cCccCCCcEEEEecCCC
Q 024375 225 EPELDGWNLYLVDWGYN 241 (268)
Q Consensus 225 ~~~~agi~~i~v~wGy~ 241 (268)
.|+|.+-|.+-+.
T Consensus 145 ----sg~pi~pv~~~~s 157 (214)
T COG2121 145 ----SGVPIIPVGVATS 157 (214)
T ss_pred ----cCCCeEEEEEeee
Confidence 7888888766654
No 330
>PF06901 FrpC: RTX iron-regulated protein FrpC; InterPro: IPR010692 This family consists of several RTX iron-regulated FrpC proteins which appear to be found exclusively in Neisseria meningitidis. FrpC has been shown to be related to the RTX family of bacterial cytotoxins. FrpC is found in the meningococcal outer membrane. The function of this family is unknown although it is thought to be a virulence factor [].
Probab=28.99 E-value=29 Score=29.97 Aligned_cols=20 Identities=20% Similarity=0.102 Sum_probs=14.4
Q ss_pred CcEEEEecCcccccChhHHH
Q 024375 2 EDLYALDFDGVICDSCEETA 21 (268)
Q Consensus 2 ~~~vlFDlDGTLvDS~~~i~ 21 (268)
+..|-||||||+.----.+.
T Consensus 58 E~~v~~D~~GT~m~iPYGYL 77 (271)
T PF06901_consen 58 EHTVTFDFQGTKMVIPYGYL 77 (271)
T ss_pred eeeEEEeccceEEEeechhh
Confidence 46899999999975444433
No 331
>PF09269 DUF1967: Domain of unknown function (DUF1967); InterPro: IPR015349 The Obg family comprises a group of ancient P-loop small G proteins (GTPases) belonging to the TRAFAC (for translation factors) class and can be subdivided into several distinct protein subfamilies []. OBG GTPases have been found in both prokaryotes and eukaryotes []. The structure of the OBG GTPase from Thermus thermophilus has been determined []. This entry represents a C-terminal domain found in certain OBG GTPases. This domain contains a four-stranded beta sheet and three alpha helices flanked by an additional beta strand. It is predominantly found in the bacterial GTP-binding protein Obg, and is functionally uncharacterised. ; GO: 0000166 nucleotide binding; PDB: 1UDX_A.
Probab=28.90 E-value=59 Score=22.89 Aligned_cols=23 Identities=9% Similarity=-0.071 Sum_probs=16.1
Q ss_pred HHHHHHhcCCCCCCcEEEEcCcH
Q 024375 194 VLKQLQKKPEHQGLRLHFVEDRL 216 (268)
Q Consensus 194 ~l~~~~~~l~~~~~~~~~VGDs~ 216 (268)
.+.++|++.|+.+.++|.|||-.
T Consensus 44 Gv~~~L~~~G~~~GD~V~Ig~~e 66 (69)
T PF09269_consen 44 GVEKALRKAGAKEGDTVRIGDYE 66 (69)
T ss_dssp THHHHHHTTT--TT-EEEETTEE
T ss_pred CHHHHHHHcCCCCCCEEEEcCEE
Confidence 35677888899999999999854
No 332
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=28.53 E-value=93 Score=31.99 Aligned_cols=39 Identities=15% Similarity=0.122 Sum_probs=32.3
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCC
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTI 178 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~ 178 (268)
..++-..+.|+ ++|++++++|+++...+..+++. +|+..
T Consensus 433 ~i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~-Lgl~~ 474 (694)
T PRK14502 433 YSYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNE-LGIKD 474 (694)
T ss_pred ccCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHH-cCCCC
Confidence 35566677777 79999999999999999999996 88753
No 333
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=28.13 E-value=84 Score=27.91 Aligned_cols=15 Identities=33% Similarity=0.403 Sum_probs=11.7
Q ss_pred CCcEEEEecCccccc
Q 024375 1 MEDLYALDFDGVICD 15 (268)
Q Consensus 1 m~~~vlFDlDGTLvD 15 (268)
|..+|+-|+||||++
T Consensus 6 ~~~lIFtDlD~TLl~ 20 (274)
T COG3769 6 MPLLIFTDLDGTLLP 20 (274)
T ss_pred cceEEEEcccCcccC
Confidence 334666699999999
No 334
>TIGR01357 aroB 3-dehydroquinate synthase. This model represents 3-dehydroquinate synthase, the enzyme catalyzing the second of seven steps in the shikimate pathway of chorismate biosynthesis. Chorismate is the last common intermediate in the biosynthesis of all three aromatic amino acids.
Probab=27.72 E-value=2.4e+02 Score=25.92 Aligned_cols=85 Identities=11% Similarity=0.117 Sum_probs=44.7
Q ss_pred CCcEEEEcCCchH-----HHHHHHHHhcCCCCCCceEec-CCCCCcHHHHHHHHhc---CCCCC-CcEEEEcC-cHhhHH
Q 024375 152 SSRIYIVTSNQSR-----FVETLLRELAGVTITPDRLYG-LGTGPKVNVLKQLQKK---PEHQG-LRLHFVED-RLATLK 220 (268)
Q Consensus 152 g~~l~IvTnK~~~-----~~~~~L~~~~gl~~~f~~i~g-~~~~pkp~~l~~~~~~---l~~~~-~~~~~VGD-s~~Di~ 220 (268)
+.+..|+|++... .+...|++ .|+... -.++. .+..|.-+.+.++++. .+.+. +-++-||- +..|+-
T Consensus 20 ~~~~livtd~~~~~~~~~~v~~~L~~-~g~~~~-~~~~~~~e~~~~~~~v~~~~~~~~~~~~~r~d~IIavGGGsv~D~a 97 (344)
T TIGR01357 20 PSKLVIITDETVADLYADKLLEALQA-LGYNVL-KLTVPDGEESKSLETVQRLYDQLLEAGLDRSSTIIALGGGVVGDLA 97 (344)
T ss_pred CCeEEEEECCchHHHHHHHHHHHHHh-cCCcee-EEEeCCCCCCCCHHHHHHHHHHHHHcCCCCCCEEEEEcChHHHHHH
Confidence 5678888876442 23334553 455321 12343 3333555556555443 34432 44666766 667776
Q ss_pred HhhccCccCCCcEEEEec
Q 024375 221 NVIKEPELDGWNLYLVDW 238 (268)
Q Consensus 221 aa~~~~~~agi~~i~v~w 238 (268)
.+.+.....|+|++.|..
T Consensus 98 K~iA~~~~~~~p~i~VPT 115 (344)
T TIGR01357 98 GFVAATYMRGIRFIQVPT 115 (344)
T ss_pred HHHHHHHccCCCEEEecC
Confidence 544321234788887765
No 335
>cd01615 CIDE_N CIDE_N domain, found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins, as well as CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD(DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of ICAD/DFF45, and the CAD/DFF40 and CIDE nucleases during apoptosis. The CIDE-N domain is also found in the FSP27/CIDE-C protein.
Probab=27.62 E-value=34 Score=24.97 Aligned_cols=15 Identities=33% Similarity=0.357 Sum_probs=12.7
Q ss_pred EEEEecCcccccChh
Q 024375 4 LYALDFDGVICDSCE 18 (268)
Q Consensus 4 ~vlFDlDGTLvDS~~ 18 (268)
.++++=|||.||+-.
T Consensus 42 ~lvL~eDGTeVddEe 56 (78)
T cd01615 42 TLVLEEDGTEVDDEE 56 (78)
T ss_pred EEEEeCCCcEEccHH
Confidence 478899999999854
No 336
>smart00266 CAD Domains present in proteins implicated in post-mortem DNA fragmentation.
Probab=26.93 E-value=36 Score=24.60 Aligned_cols=15 Identities=40% Similarity=0.505 Sum_probs=12.5
Q ss_pred EEEEecCcccccChh
Q 024375 4 LYALDFDGVICDSCE 18 (268)
Q Consensus 4 ~vlFDlDGTLvDS~~ 18 (268)
.++++=|||.||+-.
T Consensus 40 ~l~L~eDGT~VddEe 54 (74)
T smart00266 40 TLVLEEDGTIVDDEE 54 (74)
T ss_pred EEEEecCCcEEccHH
Confidence 577899999999854
No 337
>PRK00994 F420-dependent methylenetetrahydromethanopterin dehydrogenase; Provisional
Probab=26.65 E-value=2.9e+02 Score=24.77 Aligned_cols=75 Identities=23% Similarity=0.333 Sum_probs=47.1
Q ss_pred CCHHHHHHHHHHHHHHhhhccccccccCCCCCcc---HHHHHHhCCCcEEEEcCCchHHHHHHHHHhcCCCC---CCceE
Q 024375 110 ENREALIELSGKVRDEWMDTDFTTWIGANRLYPG---VSDALKLASSRIYIVTSNQSRFVETLLRELAGVTI---TPDRL 183 (268)
Q Consensus 110 ~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypG---v~e~L~~~g~~l~IvTnK~~~~~~~~L~~~~gl~~---~f~~i 183 (268)
+.++++++......+.|.-.+. -+...+.--|| ++|+|++.|++..|+|--+..-.+.-|+. .|+.. --|..
T Consensus 43 m~pe~~~~~~~~~~~~~~pDf~-i~isPN~a~PGP~~ARE~l~~~~iP~IvI~D~p~~K~~d~l~~-~g~GYIivk~DpM 120 (277)
T PRK00994 43 MGPEEVEEVVKKMLEEWKPDFV-IVISPNPAAPGPKKAREILKAAGIPCIVIGDAPGKKVKDAMEE-QGLGYIIVKADPM 120 (277)
T ss_pred CCHHHHHHHHHHHHHhhCCCEE-EEECCCCCCCCchHHHHHHHhcCCCEEEEcCCCccchHHHHHh-cCCcEEEEecCcc
Confidence 3456666666555555532111 11222233455 88999999999999999888888888986 88742 12445
Q ss_pred ecC
Q 024375 184 YGL 186 (268)
Q Consensus 184 ~g~ 186 (268)
||.
T Consensus 121 IGA 123 (277)
T PRK00994 121 IGA 123 (277)
T ss_pred ccc
Confidence 554
No 338
>COG0052 RpsB Ribosomal protein S2 [Translation, ribosomal structure and biogenesis]
Probab=26.45 E-value=4e+02 Score=23.88 Aligned_cols=31 Identities=16% Similarity=-0.011 Sum_probs=25.1
Q ss_pred cEEEEcCcHhhHHHhhccCccCCCcEEEEecC
Q 024375 208 RLHFVEDRLATLKNVIKEPELDGWNLYLVDWG 239 (268)
Q Consensus 208 ~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wG 239 (268)
++++|=|...|-.|-++|.. .|||+||+.=-
T Consensus 158 d~l~ViDp~~e~iAv~EA~k-lgIPVvAlvDT 188 (252)
T COG0052 158 DVLFVIDPRKEKIAVKEANK-LGIPVVALVDT 188 (252)
T ss_pred CEEEEeCCcHhHHHHHHHHH-cCCCEEEEecC
Confidence 58999999999888777554 69999998543
No 339
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=26.29 E-value=64 Score=26.73 Aligned_cols=75 Identities=19% Similarity=0.125 Sum_probs=42.0
Q ss_pred hCCCcEEEEcCCchHH-HHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHh---cCCCCCCcEEEEcCcHhhHHHhhcc
Q 024375 150 LASSRIYIVTSNQSRF-VETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQK---KPEHQGLRLHFVEDRLATLKNVIKE 225 (268)
Q Consensus 150 ~~g~~l~IvTnK~~~~-~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~---~l~~~~~~~~~VGDs~~Di~aa~~~ 225 (268)
..+-++++++....-. +..+-+ .+|++..+ ..+ . .++-+..+++ .-|++ ++||+... ...|++
T Consensus 75 ~~~~~Iavv~~~~~~~~~~~~~~-ll~~~i~~-~~~--~---~~~e~~~~i~~~~~~G~~----viVGg~~~-~~~A~~- 141 (176)
T PF06506_consen 75 KYGPKIAVVGYPNIIPGLESIEE-LLGVDIKI-YPY--D---SEEEIEAAIKQAKAEGVD----VIVGGGVV-CRLARK- 141 (176)
T ss_dssp CCTSEEEEEEESS-SCCHHHHHH-HHT-EEEE-EEE--S---SHHHHHHHHHHHHHTT------EEEESHHH-HHHHHH-
T ss_pred hcCCcEEEEecccccHHHHHHHH-HhCCceEE-EEE--C---CHHHHHHHHHHHHHcCCc----EEECCHHH-HHHHHH-
Confidence 4677899999765544 445555 36663211 111 1 2333333333 34666 99999975 677777
Q ss_pred CccCCCcEEEEecCC
Q 024375 226 PELDGWNLYLVDWGY 240 (268)
Q Consensus 226 ~~~agi~~i~v~wGy 240 (268)
.|++++.+.-|.
T Consensus 142 ---~gl~~v~i~sg~ 153 (176)
T PF06506_consen 142 ---LGLPGVLIESGE 153 (176)
T ss_dssp ---TTSEEEESS--H
T ss_pred ---cCCcEEEEEecH
Confidence 799998886554
No 340
>PF10113 Fibrillarin_2: Fibrillarin-like archaeal protein; InterPro: IPR016760 Members of this protein family are HmdC, whose gene regularly occurs in the context of genes for HmdA (5,10-methenyltetrahydromethanopterin hydrogenase) and the radical SAM protein HmdB involved in biosynthesis of the HmdA cofactor. Bioinformatics suggests this protein, a homologue of eukaryotic fibrillarin, may be involved in biosynthesis of the guanylyl pyridinol cofactor in HmdA.
Probab=26.28 E-value=1e+02 Score=29.84 Aligned_cols=51 Identities=20% Similarity=0.120 Sum_probs=42.1
Q ss_pred HHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCH
Q 024375 193 NVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTP 243 (268)
Q Consensus 193 ~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~ 243 (268)
+.+.++.+++|---+-+++|||..-|+..+..++..-|+++.-|--|--+.
T Consensus 209 ~~Va~~Akk~gkGveaI~~vGDGyddLI~G~~a~id~~vDvfVvEGgPFN~ 259 (505)
T PF10113_consen 209 EEVAELAKKYGKGVEAIMHVGDGYDDLITGLKACIDMGVDVFVVEGGPFNR 259 (505)
T ss_pred HHHHHHHHHhCCCceEEEEecCChHHHHHHHHHHHhcCCcEEEEeCCCccc
Confidence 456667778887778899999999999999998888999998888775443
No 341
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=25.93 E-value=35 Score=31.98 Aligned_cols=16 Identities=13% Similarity=0.356 Sum_probs=13.5
Q ss_pred cEEEEecCcccccChh
Q 024375 3 DLYALDFDGVICDSCE 18 (268)
Q Consensus 3 ~~vlFDlDGTLvDS~~ 18 (268)
++|-||+|.||+-=-.
T Consensus 13 ~~~GFDmDyTLa~Y~~ 28 (343)
T TIGR02244 13 QVFGFDMDYTLAQYKS 28 (343)
T ss_pred CEEEECccccccccCh
Confidence 7899999999996544
No 342
>PF01993 MTD: methylene-5,6,7,8-tetrahydromethanopterin dehydrogenase; InterPro: IPR002844 This archaeal enzyme family is involved in formation of methane from carbon dioxide 1.5.99.9 from EC. The enzyme requires coenzyme F420 [].; GO: 0008901 ferredoxin hydrogenase activity, 0015948 methanogenesis, 0055114 oxidation-reduction process; PDB: 1U6I_D 3IQF_G 1QV9_C 3IQE_F 1U6J_G 3IQZ_D 1U6K_B.
Probab=25.79 E-value=83 Score=28.14 Aligned_cols=68 Identities=15% Similarity=0.109 Sum_probs=0.0
Q ss_pred HHHHHH-----hCCCcEEEEcCCc-------hHHHHHHHHHhcCCCCCCceEecCCCC-CcHHHHHHHHhcCCCCCCcEE
Q 024375 144 VSDALK-----LASSRIYIVTSNQ-------SRFVETLLRELAGVTITPDRLYGLGTG-PKVNVLKQLQKKPEHQGLRLH 210 (268)
Q Consensus 144 v~e~L~-----~~g~~l~IvTnK~-------~~~~~~~L~~~~gl~~~f~~i~g~~~~-pkp~~l~~~~~~l~~~~~~~~ 210 (268)
+.|+|. ..++.+-++|+-. ++.+..+++. ++-+ |-.+++.... |-|...++++...+++ |+
T Consensus 17 ~idl~LDErAdRedI~vrv~gsGaKm~pe~~e~~~~~~~~~-~~pd--f~I~isPN~~~PGP~~ARE~l~~~~iP---~I 90 (276)
T PF01993_consen 17 VIDLLLDERADREDIDVRVVGSGAKMGPEDVEEVVTKMLKE-WDPD--FVIVISPNAAAPGPTKAREMLSAKGIP---CI 90 (276)
T ss_dssp HTTGGGSTTS--SSEEEEEEEEET--SHHHHHHHHHHHHHH-H--S--EEEEE-S-TTSHHHHHHHHHHHHSSS----EE
T ss_pred HHHHHHHhhhccCCceEEEeccCCCCCHHHHHHHHHHHHHh-hCCC--EEEEECCCCCCCCcHHHHHHHHhCCCC---EE
Q ss_pred EEcCcHh
Q 024375 211 FVEDRLA 217 (268)
Q Consensus 211 ~VGDs~~ 217 (268)
.|||.+.
T Consensus 91 vI~D~p~ 97 (276)
T PF01993_consen 91 VISDAPT 97 (276)
T ss_dssp EEEEGGG
T ss_pred EEcCCCc
No 343
>cd06537 CIDE_N_B CIDE_N domain of CIDE-B proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45 and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=25.46 E-value=40 Score=24.80 Aligned_cols=15 Identities=33% Similarity=0.417 Sum_probs=12.8
Q ss_pred EEEEecCcccccChh
Q 024375 4 LYALDFDGVICDSCE 18 (268)
Q Consensus 4 ~vlFDlDGTLvDS~~ 18 (268)
.++.+=|||.|||-.
T Consensus 41 ~lvLeeDGT~Vd~Ee 55 (81)
T cd06537 41 TLVLEEDGTAVDSED 55 (81)
T ss_pred EEEEecCCCEEccHH
Confidence 578899999999865
No 344
>cd08197 DOIS 2-deoxy-scyllo-inosose synthase (DOIS) catalyzes carbocycle formation from D-glucose-6-phosphate to 2-deoxy-scyllo-inosose through a multistep reaction in the biosynthesis of aminoglycoside antibiotics. 2-deoxy-scyllo-inosose synthase (DOIS) catalyzes carbocycle formation from D-glucose-6-phosphate to 2-deoxy-scyllo-inosose through a multistep reaction in the biosynthesis of aminoglycoside antibiotics. 2-Deoxystreptamine (DOS)-containing aminoglycoside antibiotics includes neomycin, kanamycin, gentamicin, and ribostamycin. They are important antibacterial agents. DOIS is a homologue of the dehydroquinate synthase which catalyzes the cyclization of 3-deoxy-D-arabino-heputulosonate-7-phosphate to dehydroquinate (DHQ) in the shikimate pathway.
Probab=25.42 E-value=3.5e+02 Score=25.26 Aligned_cols=94 Identities=14% Similarity=0.092 Sum_probs=50.2
Q ss_pred HHHHHHhCC-CcEEEEcCCchH-----HHHHHHHHhcCCCCCCceEec-CCCCCcHHHHHHHHh---cCCCCCCc-EEEE
Q 024375 144 VSDALKLAS-SRIYIVTSNQSR-----FVETLLRELAGVTITPDRLYG-LGTGPKVNVLKQLQK---KPEHQGLR-LHFV 212 (268)
Q Consensus 144 v~e~L~~~g-~~l~IvTnK~~~-----~~~~~L~~~~gl~~~f~~i~g-~~~~pkp~~l~~~~~---~l~~~~~~-~~~V 212 (268)
+.+.|...| .++.|+|.+... .+...|+. .|+.. .-.++. .+..|.-+.+.++.+ +.+.+... ++-|
T Consensus 14 l~~~l~~~g~~rvlvVtd~~v~~~~~~~l~~~L~~-~g~~~-~~~~~~~~e~~k~~~~v~~~~~~~~~~~~dr~~~IIAv 91 (355)
T cd08197 14 VLGYLPELNADKYLLVTDSNVEDLYGHRLLEYLRE-AGAPV-ELLSVPSGEEHKTLSTLSDLVERALALGATRRSVIVAL 91 (355)
T ss_pred HHHHHHhcCCCeEEEEECccHHHHHHHHHHHHHHh-cCCce-EEEEeCCCCCCCCHHHHHHHHHHHHHcCCCCCcEEEEE
Confidence 334444444 578888877542 23444553 45532 112343 333355555555444 44665544 5568
Q ss_pred cC-cHhhHHHhhccCccCCCcEEEEecC
Q 024375 213 ED-RLATLKNVIKEPELDGWNLYLVDWG 239 (268)
Q Consensus 213 GD-s~~Di~aa~~~~~~agi~~i~v~wG 239 (268)
|. +..|+-.+.++-..-|+|+|.|...
T Consensus 92 GGGsv~D~ak~~A~~~~rgip~I~IPTT 119 (355)
T cd08197 92 GGGVVGNIAGLLAALLFRGIRLVHIPTT 119 (355)
T ss_pred CCcHHHHHHHHHHHHhccCCCEEEecCc
Confidence 77 6778765543211137888888774
No 345
>cd06536 CIDE_N_ICAD CIDE_N domain of ICAD. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD (DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40 and ICAD/DFF45 during apoptosis. In normal cells, DFF exists in the nucleus as a heterodimer composed of CAD/DFF40 as a latent nuclease and its chaperone and inhibitor subunit ICAD/DFF45. Apoptotic activation of caspase-3 results in the cleavage of DFF45/ICAD and release of active DFF40/CAD nuclease.
Probab=25.01 E-value=41 Score=24.71 Aligned_cols=15 Identities=27% Similarity=0.375 Sum_probs=12.6
Q ss_pred EEEEecCcccccChh
Q 024375 4 LYALDFDGVICDSCE 18 (268)
Q Consensus 4 ~vlFDlDGTLvDS~~ 18 (268)
.|+++=|||.||+-.
T Consensus 44 ~lvL~eDGT~VddEe 58 (80)
T cd06536 44 TLVLAEDGTIVEDED 58 (80)
T ss_pred EEEEecCCcEEccHH
Confidence 577899999999854
No 346
>PF07279 DUF1442: Protein of unknown function (DUF1442); InterPro: IPR009902 This family consists of several hypothetical Arabidopsis thaliana proteins of around 225 residues in length. The function of this family is unknown.
Probab=24.63 E-value=4.8e+02 Score=22.87 Aligned_cols=93 Identities=12% Similarity=0.144 Sum_probs=53.1
Q ss_pred ccHHHHHH--h--CCCcEEEEc-CCc----hHHHHHHHHHhcCCCCCCceEecCC-CCCcHHHHHHHHhcCCCCCCcEEE
Q 024375 142 PGVSDALK--L--ASSRIYIVT-SNQ----SRFVETLLRELAGVTITPDRLYGLG-TGPKVNVLKQLQKKPEHQGLRLHF 211 (268)
Q Consensus 142 pGv~e~L~--~--~g~~l~IvT-nK~----~~~~~~~L~~~~gl~~~f~~i~g~~-~~pkp~~l~~~~~~l~~~~~~~~~ 211 (268)
||+.|+|. + .+-++.|.+ +.. ...+..+-.++.| ..+++-- ...+..-..+++..++...--=++
T Consensus 27 p~~aEfISAlAAG~nAkliVe~~s~g~~~~ttiaLaaAAr~Tg-----GR~vCIvp~~~~~~~~~~~l~~~~~~~~vEfv 101 (218)
T PF07279_consen 27 PGVAEFISALAAGWNAKLIVEAWSSGGAISTTIALAAAARQTG-----GRHVCIVPDEQSLSEYKKALGEAGLSDVVEFV 101 (218)
T ss_pred CCHHHHHHHHhccccceEEEEEecCCCchHhHHHHHHHHHhcC-----CeEEEEcCChhhHHHHHHHHhhccccccceEE
Confidence 89999999 3 445555544 332 1222223332233 1223311 112334455666656654221267
Q ss_pred EcCcHhhHHHhhccCccCCCcEEEEecCCCCHH
Q 024375 212 VEDRLATLKNVIKEPELDGWNLYLVDWGYNTPK 244 (268)
Q Consensus 212 VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~ 244 (268)
|||...++..-. .|++|+.|.+-..+..
T Consensus 102 vg~~~e~~~~~~-----~~iDF~vVDc~~~d~~ 129 (218)
T PF07279_consen 102 VGEAPEEVMPGL-----KGIDFVVVDCKREDFA 129 (218)
T ss_pred ecCCHHHHHhhc-----cCCCEEEEeCCchhHH
Confidence 899999887655 5999999999876554
No 347
>cd06539 CIDE_N_A CIDE_N domain of CIDE-A proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45, and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, the CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=24.50 E-value=43 Score=24.45 Aligned_cols=15 Identities=33% Similarity=0.507 Sum_probs=12.7
Q ss_pred EEEEecCcccccChh
Q 024375 4 LYALDFDGVICDSCE 18 (268)
Q Consensus 4 ~vlFDlDGTLvDS~~ 18 (268)
.++.+=|||.|||-.
T Consensus 42 ~lvL~eDGT~Vd~Ee 56 (78)
T cd06539 42 TLVLEEDGTVVDTEE 56 (78)
T ss_pred EEEEeCCCCEEccHH
Confidence 578899999999854
No 348
>KOG3147 consensus 6-phosphogluconolactonase - like protein [Carbohydrate transport and metabolism]
Probab=24.47 E-value=1.2e+02 Score=27.10 Aligned_cols=60 Identities=13% Similarity=0.203 Sum_probs=40.2
Q ss_pred CCCCCccHHHHHHhCCCcEEEEcCCchH------HHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCC
Q 024375 137 ANRLYPGVSDALKLASSRIYIVTSNQSR------FVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPE 203 (268)
Q Consensus 137 ~~~lypGv~e~L~~~g~~l~IvTnK~~~------~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~ 203 (268)
.+.|||| ...|.+..-.+..+|+.|.. ++..++.+ ..+...++++. .|.+++..+++..+
T Consensus 156 taSLFP~-~~~l~e~~~wV~~itdSPkpPp~RITlTLPvIn~----A~~v~fvv~G~--~Ka~iv~~i~~~~~ 221 (252)
T KOG3147|consen 156 TASLFPG-HPLLNEKLKWVVPITDSPKPPPKRITLTLPVINH----AKNVAFVVCGA--SKAEIVKAILEDKE 221 (252)
T ss_pred eeecCCC-chhhhcccCEEEEeCCCCCCCCccEEEehHHhhh----hhceEEEEeCc--chhHhHHHHHhccc
Confidence 3689999 77777777789999987765 34444543 23444555433 47788888887663
No 349
>PRK01045 ispH 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed
Probab=24.35 E-value=2.7e+02 Score=25.58 Aligned_cols=80 Identities=16% Similarity=0.165 Sum_probs=55.0
Q ss_pred cEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcE
Q 024375 154 RIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (268)
Q Consensus 154 ~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~ 233 (268)
.++-+|...++.++.+.+. ..+ -.|+|+..-++..-|.+++++.+. ++.+|+ +..|+....= .|...
T Consensus 192 TIC~aT~~RQ~a~~~La~~-vD~----miVVGg~~SsNT~kL~~i~~~~~~---~t~~Ie-~~~el~~~~l----~~~~~ 258 (298)
T PRK01045 192 DICYATQNRQEAVKELAPQ-ADL----VIVVGSKNSSNSNRLREVAEEAGA---PAYLID-DASEIDPEWF----KGVKT 258 (298)
T ss_pred CcchhhHHHHHHHHHHHhh-CCE----EEEECCCCCccHHHHHHHHHHHCC---CEEEEC-ChHHCcHHHh----cCCCE
Confidence 4566778888888877764 332 356676544667778888887763 257775 4577765443 67889
Q ss_pred EEEecCCCCHHHH
Q 024375 234 YLVDWGYNTPKER 246 (268)
Q Consensus 234 i~v~wGy~~~~el 246 (268)
||++=|..+++.+
T Consensus 259 VGitaGASTP~~l 271 (298)
T PRK01045 259 VGVTAGASAPEWL 271 (298)
T ss_pred EEEEecCCCCHHH
Confidence 9999999888765
No 350
>TIGR00216 ispH_lytB (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming). Escherichia coli LytB protein had been found to regulate the activity of RelA (guanosine 3',5'-bispyrophosphate synthetase I), which in turn controls the level of a regulatory metabolite. It is involved in penicillin tolerance and the stringent response.
Probab=23.72 E-value=2.2e+02 Score=25.91 Aligned_cols=80 Identities=18% Similarity=0.144 Sum_probs=55.6
Q ss_pred cEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcE
Q 024375 154 RIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (268)
Q Consensus 154 ~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~ 233 (268)
.++-+|...++.+..+.++ ..+ -.|+|+..-++..-|.+++++.+. ++.+|+ +..|+....= .|...
T Consensus 190 TIC~AT~~RQ~a~~~la~~-vD~----miVVGg~nSsNT~rL~ei~~~~~~---~t~~Ie-~~~el~~~~l----~~~~~ 256 (280)
T TIGR00216 190 TICYATQNRQDAVKELAPE-VDL----MIVIGGKNSSNTTRLYEIAEEHGP---PSYLIE-TAEELPEEWL----KGVKV 256 (280)
T ss_pred CcccccHHHHHHHHHHHhh-CCE----EEEECCCCCchHHHHHHHHHHhCC---CEEEEC-ChHHCCHHHh----CCCCE
Confidence 4677888888888888774 332 245675544667778888887763 367774 5577765443 57788
Q ss_pred EEEecCCCCHHHH
Q 024375 234 YLVDWGYNTPKER 246 (268)
Q Consensus 234 i~v~wGy~~~~el 246 (268)
||++=|..+++.+
T Consensus 257 VGiTAGASTP~~l 269 (280)
T TIGR00216 257 VGITAGASTPDWI 269 (280)
T ss_pred EEEEecCCCCHHH
Confidence 9999998877655
No 351
>PLN02151 trehalose-phosphatase
Probab=23.34 E-value=1.8e+02 Score=27.48 Aligned_cols=49 Identities=18% Similarity=0.147 Sum_probs=27.1
Q ss_pred cCCchHHHHHHHHHhcCCCCC---CceEecCCCCCcHHHHHHHHhc-CCCCCCcEEEEcC
Q 024375 159 TSNQSRFVETLLRELAGVTIT---PDRLYGLGTGPKVNVLKQLQKK-PEHQGLRLHFVED 214 (268)
Q Consensus 159 TnK~~~~~~~~L~~~~gl~~~---f~~i~g~~~~pkp~~l~~~~~~-l~~~~~~~~~VGD 214 (268)
.||... ++.+|++ +++... |-..+| |...+-+++..+-+. -|+. +-||.
T Consensus 268 ~dKG~A-v~~Ll~~-~~~~~~~~~~pvyiG-DD~TDEDaF~~L~~~~~G~g----I~Vg~ 320 (354)
T PLN02151 268 WDKGKA-LEFLLES-LGYANCTDVFPIYIG-DDRTDEDAFKILRDKKQGLG----ILVSK 320 (354)
T ss_pred CCHHHH-HHHHHHh-cccccCCCCeEEEEc-CCCcHHHHHHHHhhcCCCcc----EEecc
Confidence 466654 5678885 776533 333445 445677777755432 1332 66764
No 352
>TIGR03595 Obg_CgtA_exten Obg family GTPase CgtA, C-terminal extension. CgtA (see model TIGR02729) is a broadly conserved member of the obg family of GTPases associated with ribosome maturation. This model represents a unique C-terminal domain found in some but not all sequences of CgtA. This region is preceded, and may be followed, by a region of low-complexity sequence.
Probab=23.27 E-value=90 Score=21.97 Aligned_cols=24 Identities=8% Similarity=-0.115 Sum_probs=19.3
Q ss_pred HHHHHHhcCCCCCCcEEEEcCcHh
Q 024375 194 VLKQLQKKPEHQGLRLHFVEDRLA 217 (268)
Q Consensus 194 ~l~~~~~~l~~~~~~~~~VGDs~~ 217 (268)
.+.++|++.|+.+..+|.|||-..
T Consensus 44 Gv~~~L~~~G~~~GD~V~Ig~~eF 67 (69)
T TIGR03595 44 GVEDALRKAGAKDGDTVRIGDFEF 67 (69)
T ss_pred CHHHHHHHcCCCCCCEEEEccEEE
Confidence 366778888999999999998543
No 353
>PF02017 CIDE-N: CIDE-N domain; InterPro: IPR003508 This domain consists of caspase-activated (CAD) nucleases, which induce DNA fragmentation and chromatin condensation during apoptosis, and the cell death activator proteins CIDE-A and CIDE-B, which are inhibitors of CAD nuclease. The two proteins interact through the region defined by the method signatures.; GO: 0006915 apoptosis, 0005622 intracellular; PDB: 1IBX_A 2EEL_A 1F2R_I 1C9F_A 1D4B_A.
Probab=23.23 E-value=44 Score=24.41 Aligned_cols=15 Identities=33% Similarity=0.337 Sum_probs=12.1
Q ss_pred EEEEecCcccccChh
Q 024375 4 LYALDFDGVICDSCE 18 (268)
Q Consensus 4 ~vlFDlDGTLvDS~~ 18 (268)
.++++=|||.||+-.
T Consensus 42 ~lvL~eDGT~VddEe 56 (78)
T PF02017_consen 42 RLVLEEDGTEVDDEE 56 (78)
T ss_dssp EEEETTTTCBESSCH
T ss_pred EEEEeCCCcEEccHH
Confidence 467789999999754
No 354
>KOG2832 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=23.03 E-value=1.6e+02 Score=27.91 Aligned_cols=71 Identities=21% Similarity=0.138 Sum_probs=46.5
Q ss_pred CccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCc-eEecCCCC-CcHHHHHHHHhcCCCCCCcEEEEc
Q 024375 141 YPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTITPD-RLYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVE 213 (268)
Q Consensus 141 ypGv~e~L~--~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~-~i~g~~~~-pkp~~l~~~~~~l~~~~~~~~~VG 213 (268)
=|||.-+|. .+.+.+.|.|+-..-++..++++ +.-..|.. .+++...+ -.+.-+.. +..++-++.++++|.
T Consensus 216 RPgvD~FL~~~a~~yEIVi~sse~gmt~~pl~d~-lDP~g~IsYkLfr~~t~y~~G~HvKd-ls~LNRdl~kVivVd 290 (393)
T KOG2832|consen 216 RPGVDYFLGHLAKYYEIVVYSSEQGMTVFPLLDA-LDPKGYISYKLFRGATKYEEGHHVKD-LSKLNRDLQKVIVVD 290 (393)
T ss_pred CchHHHHHHhhcccceEEEEecCCccchhhhHhh-cCCcceEEEEEecCcccccCccchhh-hhhhccccceeEEEE
Confidence 488888888 67889999999999999999986 65544432 33443322 11111222 445677788888884
No 355
>COG4018 Uncharacterized protein conserved in archaea [Function unknown]
Probab=22.90 E-value=1.4e+02 Score=28.18 Aligned_cols=51 Identities=14% Similarity=0.119 Sum_probs=40.9
Q ss_pred HHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCH
Q 024375 193 NVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTP 243 (268)
Q Consensus 193 ~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~ 243 (268)
+.+.+..++.|-.-+-+++|||..-|+..+.++++.-++++..|--|--+.
T Consensus 209 k~VaEtArk~GkGveaI~hvgDGyDdli~G~kA~ve~~vDvfvvEGgPFNr 259 (505)
T COG4018 209 KRVAETARKSGKGVEAILHVGDGYDDLIDGLKAAVEEVVDVFVVEGGPFNR 259 (505)
T ss_pred HHHHHHHHHhCCCceeEEEecCCcHHHHHHHHHHHHhcCcEEEEcCCCcch
Confidence 345566677777778899999999999999988888888888888776554
No 356
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=22.81 E-value=42 Score=31.33 Aligned_cols=50 Identities=22% Similarity=0.270 Sum_probs=32.0
Q ss_pred HHHHHHHhcC-CC-CCCcEEEEcCcH-hhHHHhh---------cc--CccCCCcEEEEecCCCC
Q 024375 193 NVLKQLQKKP-EH-QGLRLHFVEDRL-ATLKNVI---------KE--PELDGWNLYLVDWGYNT 242 (268)
Q Consensus 193 ~~l~~~~~~l-~~-~~~~~~~VGDs~-~Di~aa~---------~~--~~~agi~~i~v~wGy~~ 242 (268)
++|.+..+.. +. ++....||||.+ .|+..|. .+ .++-|.-+|.|..|-..
T Consensus 282 ~vl~~~ak~~~~~~~~k~lymvGDNP~sDv~GA~lf~~yap~~~~g~~~~~~w~SILV~TGV~~ 345 (389)
T KOG1618|consen 282 DVLRRQAKRRGGAAPIKKLYMVGDNPMSDVRGANLFHQYAPELGAGGSANYGWISILVRTGVYN 345 (389)
T ss_pred HHHHHHHHhhcccCCcceeeeecCCCcccccccccccccccccccccccCCCceEEEEeeeeec
Confidence 3444444333 33 356788999997 6888885 00 11267778999998755
No 357
>PF07085 DRTGG: DRTGG domain; InterPro: IPR010766 This presumed domain is about 120 amino acids in length. It is found associated with CBS domains IPR000644 from INTERPRO, as well as the CbiA domain IPR002586 from INTERPRO. The function of this domain is unknown. It is named the DRTGG domain after some of the most conserved residues. This domain may be very distantly related to a pair of CBS domains. There are no significant sequence similarities, but its length and association with CBS domains supports this idea. ; PDB: 3L31_B 3L2B_A 2IOJ_A.
Probab=22.58 E-value=1.6e+02 Score=21.89 Aligned_cols=38 Identities=18% Similarity=0.135 Sum_probs=24.8
Q ss_pred CCcEEEE-cCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHH
Q 024375 206 GLRLHFV-EDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERA 247 (268)
Q Consensus 206 ~~~~~~V-GDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~ 247 (268)
+..++.+ ||+..=+.+|.. +|+.++-++.|+.-.++..
T Consensus 40 ~~~lvIt~gdR~di~~~a~~----~~i~~iIltg~~~~~~~v~ 78 (105)
T PF07085_consen 40 PGDLVITPGDREDIQLAAIE----AGIACIILTGGLEPSEEVL 78 (105)
T ss_dssp TTEEEEEETT-HHHHHHHCC----TTECEEEEETT----HHHH
T ss_pred CCeEEEEeCCcHHHHHHHHH----hCCCEEEEeCCCCCCHHHH
Confidence 3667888 999666666666 8899999999887665543
No 358
>COG2022 ThiG Uncharacterized enzyme of thiazole biosynthesis [Nucleotide transport and metabolism]
Probab=21.72 E-value=5.9e+02 Score=22.81 Aligned_cols=92 Identities=16% Similarity=0.195 Sum_probs=68.3
Q ss_pred CCCCCccHHHHHH------hCCCcEEEEcCCchHHHHHHHHHhcCCCC--CCceEecCCCC-CcHHHHHHHHhcCCCCCC
Q 024375 137 ANRLYPGVSDALK------LASSRIYIVTSNQSRFVETLLRELAGVTI--TPDRLYGLGTG-PKVNVLKQLQKKPEHQGL 207 (268)
Q Consensus 137 ~~~lypGv~e~L~------~~g~~l~IvTnK~~~~~~~~L~~~~gl~~--~f~~i~g~~~~-pkp~~l~~~~~~l~~~~~ 207 (268)
.-.|+|.+.|+|+ +.|+.+.--||-.--.++++.+ -|-.- ....=||+..+ -.|..++-+.++..++
T Consensus 109 ~~tLlPD~~etl~Aae~Lv~eGF~VlPY~~dD~v~arrLee--~GcaavMPl~aPIGSg~G~~n~~~l~iiie~a~VP-- 184 (262)
T COG2022 109 EKTLLPDPIETLKAAEQLVKEGFVVLPYTTDDPVLARRLEE--AGCAAVMPLGAPIGSGLGLQNPYNLEIIIEEADVP-- 184 (262)
T ss_pred CcccCCChHHHHHHHHHHHhCCCEEeeccCCCHHHHHHHHh--cCceEeccccccccCCcCcCCHHHHHHHHHhCCCC--
Confidence 3579999999999 6999999999999999999887 46421 12333455555 7889999999988777
Q ss_pred cEEEEcC---cHhhHHHhhccCccCCCcEEEEec
Q 024375 208 RLHFVED---RLATLKNVIKEPELDGWNLYLVDW 238 (268)
Q Consensus 208 ~~~~VGD---s~~Di~aa~~~~~~agi~~i~v~w 238 (268)
+.|.= ++.|...|.+ -|++-|.+..
T Consensus 185 --viVDAGiG~pSdAa~aME----lG~DaVL~NT 212 (262)
T COG2022 185 --VIVDAGIGTPSDAAQAME----LGADAVLLNT 212 (262)
T ss_pred --EEEeCCCCChhHHHHHHh----cccceeehhh
Confidence 66642 5678777777 5666676654
No 359
>PRK03692 putative UDP-N-acetyl-D-mannosaminuronic acid transferase; Provisional
Probab=21.59 E-value=2.8e+02 Score=24.53 Aligned_cols=62 Identities=21% Similarity=0.277 Sum_probs=0.0
Q ss_pred HHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccC-----CCcEEEEecCCCCHHHHHh-----cCCCCCeee
Q 024375 192 VNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELD-----GWNLYLVDWGYNTPKERAE-----AASMPRIQL 257 (268)
Q Consensus 192 p~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~a-----gi~~i~v~wGy~~~~el~~-----~~~~P~~~~ 257 (268)
++.+..+++...-..-.+.++|-++.-++.+.+ . |+.+++..-||.++++.+. ....||+++
T Consensus 91 ~dl~~~ll~~~~~~~~~v~llG~~~~v~~~a~~----~l~~~y~l~i~g~~~Gyf~~~e~~~i~~~I~~s~~dil~ 162 (243)
T PRK03692 91 ADLWEALMARAGKEGTPVFLVGGKPEVLAQTEA----KLRTQWNVNIVGSQDGYFTPEQRQALFERIHASGAKIVT 162 (243)
T ss_pred HHHHHHHHHHHHhcCCeEEEECCCHHHHHHHHH----HHHHHhCCEEEEEeCCCCCHHHHHHHHHHHHhcCCCEEE
No 360
>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=21.32 E-value=21 Score=32.08 Aligned_cols=17 Identities=24% Similarity=0.335 Sum_probs=13.3
Q ss_pred CcEEEEecCcccccChh
Q 024375 2 EDLYALDFDGVICDSCE 18 (268)
Q Consensus 2 ~~~vlFDlDGTLvDS~~ 18 (268)
.|+++.|||.||+-|.-
T Consensus 89 kk~lVLDLDeTLvHss~ 105 (262)
T KOG1605|consen 89 RKTLVLDLDETLVHSSL 105 (262)
T ss_pred CceEEEeCCCccccccc
Confidence 47888999999877664
No 361
>PRK12360 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Provisional
Probab=20.99 E-value=2.8e+02 Score=25.24 Aligned_cols=80 Identities=16% Similarity=0.142 Sum_probs=54.4
Q ss_pred cEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcE
Q 024375 154 RIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (268)
Q Consensus 154 ~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~ 233 (268)
.++-+|...++.+..+-++ ..+ -.|+|+..-++..-|.+++++.+. ++.+|. +..|+....= .|..+
T Consensus 191 TIC~aT~~RQ~a~~~La~~-vD~----miVVGg~~SsNT~rL~eia~~~~~---~t~~Ie-~~~el~~~~~----~~~~~ 257 (281)
T PRK12360 191 TICSATKKRQESAKELSKE-VDV----MIVIGGKHSSNTQKLVKICEKNCP---NTFHIE-TADELDLEML----KDYKI 257 (281)
T ss_pred CcchhhhhHHHHHHHHHHh-CCE----EEEecCCCCccHHHHHHHHHHHCC---CEEEEC-ChHHCCHHHh----CCCCE
Confidence 4677788888888777664 322 245676544666778888877653 367774 4577765443 67889
Q ss_pred EEEecCCCCHHHH
Q 024375 234 YLVDWGYNTPKER 246 (268)
Q Consensus 234 i~v~wGy~~~~el 246 (268)
||++=|..+++.+
T Consensus 258 VGitaGASTP~~l 270 (281)
T PRK12360 258 IGITAGASTPDWI 270 (281)
T ss_pred EEEEccCCCCHHH
Confidence 9999998877655
No 362
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=20.63 E-value=54 Score=32.28 Aligned_cols=15 Identities=20% Similarity=0.417 Sum_probs=12.3
Q ss_pred CcEEEEecCcccccC
Q 024375 2 EDLYALDFDGVICDS 16 (268)
Q Consensus 2 ~~~vlFDlDGTLvDS 16 (268)
.|+++.|||+||.-.
T Consensus 222 kK~LVLDLDNTLWGG 236 (574)
T COG3882 222 KKALVLDLDNTLWGG 236 (574)
T ss_pred cceEEEecCCccccc
Confidence 379999999999643
Done!