BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 024379
         (268 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|1FJ2|A Chain A, Crystal Structure Of The Human Acyl Protein Thioesterase 1
           At 1.5 A Resolution
 pdb|1FJ2|B Chain B, Crystal Structure Of The Human Acyl Protein Thioesterase 1
           At 1.5 A Resolution
          Length = 232

 Score =  114 bits (286), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 75/238 (31%), Positives = 115/238 (48%), Gaps = 26/238 (10%)

Query: 26  VVRPKGKHQATVVWLHGLGDNGSSWSQLLETLPLPNIKWICPTAPTRPMTIFGGFPSTAW 85
           +V    K  A V++LHGLGD G  W++    +   +IK+ICP AP RP+T+       +W
Sbjct: 15  IVPAARKATAAVIFLHGLGDTGHGWAEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSW 74

Query: 86  FDVGDLSEDVPDDLEGLDAAAAHVVNLLSTEPTDTFEHFDSQLLQVKLGVGGFSMGAATA 145
           FD+  LS D  +D  G+  AA ++  L+  E         + +   ++ +GGFS G A +
Sbjct: 75  FDIIGLSPDSQEDESGIKQAAENIKALIDQE-------VKNGIPSNRIILGGFSQGGALS 127

Query: 146 LYSATCFAHGKYGNGNPYPAKLSAVVGLSGWLPCSKTL-KNKLGGENEARRRAASLPILL 204
           LY+A                KL+ V  LS WLP   +  +  +GG N        + IL 
Sbjct: 128 LYTALTTQQ-----------KLAGVTALSCWLPLRASFPQGPIGGANR------DISILQ 170

Query: 205 CHGKGDDVVQYKFGEKSSQALTSNAF-QDVIFKAYSGLGHYTCPEEMDEVCAWLTTKL 261
           CHG  D +V   FG  + + L +     +V FK Y G+ H +C +EM +V  ++   L
Sbjct: 171 CHGDCDPLVPLMFGSLTVEKLKTLVNPANVTFKTYEGMMHSSCQQEMMDVKQFIDKLL 228


>pdb|1AUO|A Chain A, Carboxylesterase From Pseudomonas Fluorescens
 pdb|1AUO|B Chain B, Carboxylesterase From Pseudomonas Fluorescens
 pdb|1AUR|A Chain A, Pmsf-Inhibited Carboxylesterase From Pseudomonas
           Fluorescens
 pdb|1AUR|B Chain B, Pmsf-Inhibited Carboxylesterase From Pseudomonas
           Fluorescens
          Length = 218

 Score =  100 bits (250), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 110/239 (46%), Gaps = 28/239 (11%)

Query: 26  VVRPKGKHQATVVWLHGLGDNGSSWSQLLETLP--LPNIKWICPTAPTRPMTIFGGFPST 83
           +++P     A V+WLHGLG +   +  + E L   L   +++ P APTRP+TI GG+   
Sbjct: 6   ILQPAKPADACVIWLHGLGADRYDFMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMP 65

Query: 84  AWFDVGDLSEDVPDDLEGLDAAAAHVVNLLSTEPTDTFEHFDSQLLQVKLGVGGFSMGAA 143
           +W+D+  +S      LE L+ +A  V +L+  +     +         ++ + GFS G A
Sbjct: 66  SWYDIKAMSPARSISLEELEVSAKMVTDLIEAQKRTGID-------ASRIFLAGFSQGGA 118

Query: 144 TALYSATCFAHGKYGNGNPYPAKLSAVVGLSGWLPCSKTLKNKLGGENEARRRAASLPIL 203
              ++A     G  G           V+ LS + P         G E E       +P L
Sbjct: 119 VVFHTAFINWQGPLGG----------VIALSTYAPT-------FGDELELSASQQRIPAL 161

Query: 204 LCHGKGDDVVQYKFGEKSSQALTSNAFQDVIFKAYSGLGHYTCPEEMDEVCAWLTTKLG 262
             HG+ DDVVQ   G  + + L S     V ++ Y  +GH   P+E+ ++ AWL  +LG
Sbjct: 162 CLHGQYDDVVQNAMGRSAFEHLKSRGV-TVTWQEYP-MGHEVLPQEIHDIGAWLAARLG 218


>pdb|3U0V|A Chain A, Crystal Structure Analysis Of Human Lyplal1
          Length = 239

 Score = 97.8 bits (242), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 76/263 (28%), Positives = 122/263 (46%), Gaps = 38/263 (14%)

Query: 5   GPSMSSGGNTVRRAIEFGRTYVVRPKGKHQATVVWLHGLGDNGSS---WSQ--LLETLPL 59
           GP  ++ G+ ++R I       V P G+H A++++LHG GD+G     W +  L + L  
Sbjct: 1   GPMAAASGSVLQRCI-------VSPAGRHSASLIFLHGSGDSGQGLRMWIKQVLNQDLTF 53

Query: 60  PNIKWICPTAPTRPMTIFGGFPSTAWFDVGDLSEDVPDDLEGLDAAAAHVVNLLSTEPTD 119
            +IK I PTAP R  T   G  S  WFD   ++ D P+ LE +D     + +L+      
Sbjct: 54  QHIKIIYPTAPPRSYTPMKGGISNVWFDRFKITNDCPEHLESIDVMCQVLTDLID----- 108

Query: 120 TFEHFDSQLLQVKLGVGGFSMGAATALYSATCFAHGKYGNGNPYPAKLSAVVGLSGWLPC 179
             E   S + + ++ +GGFSMG   A++ A       Y N       ++ V  LS +L  
Sbjct: 109 --EEVKSGIKKNRILIGGFSMGGCMAMHLA-------YRNHQ----DVAGVFALSSFLNK 155

Query: 180 SKTLKNKLGGENEARRRAASLPILL-CHGKGDDVVQYKFGEKSSQALTSNAFQDVIFKAY 238
           +  +   L   N        LP L  CHG  D++V + + E+++  L S       F ++
Sbjct: 156 ASAVYQALQKSN------GVLPELFQCHGTADELVLHSWAEETNSMLKSLGV-TTKFHSF 208

Query: 239 SGLGHYTCPEEMDEVCAWLTTKL 261
             + H     E+D +  W+ TKL
Sbjct: 209 PNVYHELSKTELDILKLWILTKL 231


>pdb|4F21|A Chain A, Crystal Structure Of CarboxylesterasePHOSPHOLIPASE FAMILY
           PROTEIN From Francisella Tularensis
 pdb|4F21|B Chain B, Crystal Structure Of CarboxylesterasePHOSPHOLIPASE FAMILY
           PROTEIN From Francisella Tularensis
 pdb|4F21|C Chain C, Crystal Structure Of CarboxylesterasePHOSPHOLIPASE FAMILY
           PROTEIN From Francisella Tularensis
 pdb|4F21|D Chain D, Crystal Structure Of CarboxylesterasePHOSPHOLIPASE FAMILY
           PROTEIN From Francisella Tularensis
 pdb|4F21|E Chain E, Crystal Structure Of CarboxylesterasePHOSPHOLIPASE FAMILY
           PROTEIN From Francisella Tularensis
 pdb|4F21|F Chain F, Crystal Structure Of CarboxylesterasePHOSPHOLIPASE FAMILY
           PROTEIN From Francisella Tularensis
 pdb|4F21|G Chain G, Crystal Structure Of CarboxylesterasePHOSPHOLIPASE FAMILY
           PROTEIN From Francisella Tularensis
 pdb|4F21|H Chain H, Crystal Structure Of CarboxylesterasePHOSPHOLIPASE FAMILY
           PROTEIN From Francisella Tularensis
          Length = 246

 Score = 95.5 bits (236), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 110/237 (46%), Gaps = 30/237 (12%)

Query: 26  VVRPKGKHQATVVWLHGLGDNGSSWSQLLE--TLPLPNIKWICPTAPTRPMTIFGGFPST 83
           ++ P  + +  V+WLHGLG +G  +  ++    + L  I++I P A   P+TI  G    
Sbjct: 29  LMEPAKQARFCVIWLHGLGADGHDFVDIVNYFDVSLDEIRFIFPHADIIPVTINMGMQMR 88

Query: 84  AWFDVGDLSEDVPD---DLEGLDAAAAHVVNLLSTEPTDTFEHFDSQLLQVKLGVGGFSM 140
           AW+D+  L  +  +   D+EG++++ A V  L+ ++        +  +    + + GFS 
Sbjct: 89  AWYDIKSLDANSLNRVVDVEGINSSIAKVNKLIDSQ-------VNQGIASENIILAGFSQ 141

Query: 141 GAATALYSATCFAHGKYGNGNPYPAKLSAVVGLSGWLPCSKTLKNKLGGENEARRRAASL 200
           G   A Y+A                KL  ++ LS +LP     K K+   N+       L
Sbjct: 142 GGIIATYTAIT-----------SQRKLGGIMALSTYLPAWDNFKGKITSINKG------L 184

Query: 201 PILLCHGKGDDVVQYKFGEKSSQALTSNAFQDVIFKAYSGLGHYTCPEEMDEVCAWL 257
           PIL+CHG  D V+    G   S  L  + F +  +K Y G+ H  C EE+ ++  ++
Sbjct: 185 PILVCHGTDDQVLPEVLGHDLSDKLKVSGFANE-YKHYVGMQHSVCMEEIKDISNFI 240


>pdb|3CN7|A Chain A, Crystal Structure Analysis Of The Carboxylesterase Pa3859
           From Pseudomonas Aeruginosa Pao1- Monoclinic Crystal
           Form
 pdb|3CN7|B Chain B, Crystal Structure Analysis Of The Carboxylesterase Pa3859
           From Pseudomonas Aeruginosa Pao1- Monoclinic Crystal
           Form
 pdb|3CN7|C Chain C, Crystal Structure Analysis Of The Carboxylesterase Pa3859
           From Pseudomonas Aeruginosa Pao1- Monoclinic Crystal
           Form
 pdb|3CN7|D Chain D, Crystal Structure Analysis Of The Carboxylesterase Pa3859
           From Pseudomonas Aeruginosa Pao1- Monoclinic Crystal
           Form
 pdb|3CN9|A Chain A, Crystal Structure Analysis Of The Carboxylesterase Pa3859
           From Pseudomonas Aeruginosa Pao1- Orthorhombic Crystal
           Form
 pdb|3CN9|B Chain B, Crystal Structure Analysis Of The Carboxylesterase Pa3859
           From Pseudomonas Aeruginosa Pao1- Orthorhombic Crystal
           Form
          Length = 226

 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 108/229 (47%), Gaps = 29/229 (12%)

Query: 35  ATVVWLHGLGDNGSSWSQLLETLP--LPNIKWICPTAPTRPMTIFGGFPSTAWFDVGDLS 92
           A ++WLHGLG + + +  + E L   LP+ ++I P AP++ +T+ GG+   +W+D+   S
Sbjct: 25  ACIIWLHGLGADRTDFKPVAEALQMVLPSTRFILPQAPSQAVTVNGGWVMPSWYDILAFS 84

Query: 93  EDVPDDLEGLDAAAAHVVNLLSTEPTDTFEHFDSQLLQVKLGVGGFSMGAATALYSATCF 152
                D + L+A+A  V+ L+        E     +   ++ + GFS G A  L++A   
Sbjct: 85  PARAIDEDQLNASADQVIALID-------EQRAKGIAAERIILAGFSQGGAVVLHTAF-- 135

Query: 153 AHGKYGNGNPYPAKLSAVVGLSGWLPCSKTLKNKLGGENEARRRAASLPILLCHGKGDDV 212
                     Y   L  V+ LS + P    L       +E  +R   +P+L  HG  DDV
Sbjct: 136 --------RRYAQPLGGVLALSTYAPTFDDL-----ALDERHKR---IPVLHLHGSQDDV 179

Query: 213 VQYKFGEKSSQALTSNAFQDVIFKAYSGLGHYTCPEEMDEVCAWLTTKL 261
           V    G  +  AL +   + V +  Y  +GH    EE+ ++ AWL  +L
Sbjct: 180 VDPALGRAAHDALQAQGVE-VGWHDYP-MGHEVSLEEIHDIGAWLRKRL 226


>pdb|4FHZ|A Chain A, Crystal Structure Of A Carboxyl Esterase At 2.0 Angstrom
           Resolution
          Length = 285

 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 101/260 (38%), Gaps = 51/260 (19%)

Query: 13  NTVRRAIEFGRTYVVRPKGKHQATVVWLHGLGDNGSSWSQLLETLP--LPNIKWICPTAP 70
           + + R + FGR       G+  + VV+LHG G +G+    L E L   LP   ++ P AP
Sbjct: 47  DIMTRKLTFGRRGAA--PGEATSLVVFLHGYGADGADLLGLAEPLAPHLPGTAFVAPDAP 104

Query: 71  TRPMTIFGGFPSTAWFDVGDLSEDVPDDLEGLDAAAAHVVNLLSTEPTDTFEHFDSQLLQ 130
                   GF    WF +          L+G    AA      +    D F   D +L +
Sbjct: 105 EPCRANGFGF---QWFPI--------PWLDGSSETAAAEGMAAAARDLDAF--LDERLAE 151

Query: 131 V-----KLGVGGFSMGAATALYSATCFAHGKYGNGNPYPAKLSAVVGLSGWLPCSKTLKN 185
                  L + GFS G   AL+ A   A            +++ +VG SG L   + L  
Sbjct: 152 EGLPPEALALVGFSQGTMMALHVAPRRAE-----------EIAGIVGFSGRLLAPERLAE 200

Query: 186 KLGGENEARRRAASLPILLCHGKGDDVVQYKFGEKSSQALTSNAFQDVIFKAY----SGL 241
                 EAR +    P+LL HG  D VV +     +  +L   A  +  F  Y     G 
Sbjct: 201 ------EARSKP---PVLLVHGDADPVVPF-----ADMSLAGEALAEAGFTTYGHVMKGT 246

Query: 242 GHYTCPEEMDEVCAWLTTKL 261
           GH   P+ +    A+L  +L
Sbjct: 247 GHGIAPDGLSVALAFLKERL 266


>pdb|4FTW|A Chain A, Crystal Structure Of A Carboxyl Esterase N110cL145H AT 2.3
           ANGSTROM Resolution
          Length = 285

 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 101/260 (38%), Gaps = 51/260 (19%)

Query: 13  NTVRRAIEFGRTYVVRPKGKHQATVVWLHGLGDNGSSWSQLLETLP--LPNIKWICPTAP 70
           + + R + FGR       G+  + VV+LHG G +G+    L E L   LP   ++ P AP
Sbjct: 47  DIMTRKLTFGRRGAA--PGEATSLVVFLHGYGADGADLLGLAEPLAPHLPGTAFVAPDAP 104

Query: 71  TRPMTIFGGFPSTAWFDVGDLSEDVPDDLEGLDAAAAHVVNLLSTEPTDTFEHFDSQLLQ 130
                   GF    WF +          L+G    AA      +    D F   D +L +
Sbjct: 105 EPCRACGFGF---QWFPI--------PWLDGSSETAAAEGMAAAARDLDAFH--DERLAE 151

Query: 131 V-----KLGVGGFSMGAATALYSATCFAHGKYGNGNPYPAKLSAVVGLSGWLPCSKTLKN 185
                  L + GFS G   AL+ A   A            +++ +VG SG L   + L  
Sbjct: 152 EGLPPEALALVGFSQGTMMALHVAPRRAE-----------EIAGIVGFSGRLLAPERLAE 200

Query: 186 KLGGENEARRRAASLPILLCHGKGDDVVQYKFGEKSSQALTSNAFQDVIFKAY----SGL 241
                 EAR +    P+LL HG  D VV +     +  +L   A  +  F  Y     G 
Sbjct: 201 ------EARSKP---PVLLVHGDADPVVPF-----ADMSLAGEALAEAGFTTYGHVMKGT 246

Query: 242 GHYTCPEEMDEVCAWLTTKL 261
           GH   P+ +    A+L  +L
Sbjct: 247 GHGIAPDGLSVALAFLKERL 266


>pdb|1A88|A Chain A, Chloroperoxidase L
 pdb|1A88|B Chain B, Chloroperoxidase L
 pdb|1A88|C Chain C, Chloroperoxidase L
          Length = 275

 Score = 32.3 bits (72), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 7/56 (12%)

Query: 199 SLPILLCHGKGDDVVQYKFGEKSSQALTSNAFQDVIFKAYSGLGH---YTCPEEMD 251
            +P+L+ HG  D VV Y      S  L +NA      K+Y GL H    T PE ++
Sbjct: 215 DVPVLVAHGTDDQVVPYADAAPKSAELLANA----TLKSYEGLPHGMLSTHPEVLN 266


>pdb|2AJT|A Chain A, Crystal Structure Of L-Arabinose Isomerase From E.Coli
 pdb|2AJT|B Chain B, Crystal Structure Of L-Arabinose Isomerase From E.Coli
 pdb|2AJT|C Chain C, Crystal Structure Of L-Arabinose Isomerase From E.Coli
 pdb|2HXG|A Chain A, Crystal Structure Of Mn2+ Bound Ecai
 pdb|2HXG|B Chain B, Crystal Structure Of Mn2+ Bound Ecai
 pdb|2HXG|C Chain C, Crystal Structure Of Mn2+ Bound Ecai
          Length = 500

 Score = 30.0 bits (66), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)

Query: 74  MTIFGGFPSTAWFDVGDLSEDVPDDLEGLDAAAAHVVNLLSTE 116
           MTIF  +    WF +G      P+ L  +   A HVVN L+TE
Sbjct: 1   MTIFDNYE--VWFVIGSQHLYGPETLRQVTQHAEHVVNALNTE 41


>pdb|3W04|A Chain A, Crystal Structure Of Oryza Sativa Dwarf14 (d14)
 pdb|3W04|B Chain B, Crystal Structure Of Oryza Sativa Dwarf14 (d14)
 pdb|3W05|A Chain A, Crystal Structure Of Oryza Sativa Dwarf14 (d14) In
          Complex With Pmsf
 pdb|3W05|B Chain B, Crystal Structure Of Oryza Sativa Dwarf14 (d14) In
          Complex With Pmsf
          Length = 266

 Score = 27.7 bits (60), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 13/31 (41%), Positives = 18/31 (58%)

Query: 27 VRPKGKHQATVVWLHGLGDNGSSWSQLLETL 57
          VR  G  +  VV  HG G + S+WS++L  L
Sbjct: 10 VRVVGSGERVVVLSHGFGTDQSAWSRVLPYL 40


>pdb|4IHA|A Chain A, Crystal Structure Of Rice Dwarf14 (d14) In Complex With
          A Gr24 Hydrolysis Intermediate
 pdb|4IHA|B Chain B, Crystal Structure Of Rice Dwarf14 (d14) In Complex With
          A Gr24 Hydrolysis Intermediate
 pdb|4IH9|A Chain A, Crystal Structure Of Rice Dwarf14 (d14)
 pdb|4IH9|B Chain B, Crystal Structure Of Rice Dwarf14 (d14)
          Length = 268

 Score = 27.7 bits (60), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 13/31 (41%), Positives = 18/31 (58%)

Query: 27 VRPKGKHQATVVWLHGLGDNGSSWSQLLETL 57
          VR  G  +  VV  HG G + S+WS++L  L
Sbjct: 12 VRVVGSGERVVVLSHGFGTDQSAWSRVLPYL 42


>pdb|4F2D|A Chain A, Crystal Structure Of Escherichia Coli L-Arabinose
           Isomerase (Ecai) Complexed With Ribitol
 pdb|4F2D|B Chain B, Crystal Structure Of Escherichia Coli L-Arabinose
           Isomerase (Ecai) Complexed With Ribitol
 pdb|4F2D|C Chain C, Crystal Structure Of Escherichia Coli L-Arabinose
           Isomerase (Ecai) Complexed With Ribitol
          Length = 500

 Score = 27.3 bits (59), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 2/42 (4%)

Query: 75  TIFGGFPSTAWFDVGDLSEDVPDDLEGLDAAAAHVVNLLSTE 116
           TIF  +    WF +G      P+ L  +   A HVVN L+TE
Sbjct: 2   TIFDNYE--VWFVIGSQHLYGPETLRQVTQHAEHVVNALNTE 41


>pdb|3OG2|A Chain A, Native Crystal Structure Of Trichoderma Reesei
           Beta-Galactosidase
 pdb|3OGR|A Chain A, Complex Structure Of Beta-Galactosidase From Trichoderma
           Reesei With Galactose
 pdb|3OGS|A Chain A, Complex Structure Of Beta-Galactosidase From Trichoderma
           Reesei With Iptg
 pdb|3OGV|A Chain A, Complex Structure Of Beta-Galactosidase From Trichoderma
           Reesei With Petg
          Length = 1003

 Score = 27.3 bits (59), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 13/37 (35%), Positives = 18/37 (48%)

Query: 78  GGFPSTAWFDVGDLSEDVPDDLEGLDAAAAHVVNLLS 114
           GGFP       G L  D PD L   D   AH+ ++++
Sbjct: 126 GGFPGWLQRVKGKLRTDAPDYLHATDNYVAHIASIIA 162


>pdb|1UPS|A Chain A, Glcnac[alpha]1-4gal Releasing Endo-[beta]-Galactosidase
           From Clostridium Perfringens
 pdb|1UPS|B Chain B, Glcnac[alpha]1-4gal Releasing Endo-[beta]-Galactosidase
           From Clostridium Perfringens
          Length = 420

 Score = 27.3 bits (59), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 28/122 (22%), Positives = 52/122 (42%), Gaps = 14/122 (11%)

Query: 31  GKHQATVVWLHGLGDNGSSWSQLLETLPLPNIKWICPTAPTRPMTIFGGFP---STAWFD 87
           G HQA   W+ G+ D+ + W    +T  +  ++       T  +  +G       T+W  
Sbjct: 143 GGHQA--WWMVGMQDDTNDWFNSKQTGEIDILETFFSKKDTWRIAAYGWNDPNFQTSW-- 198

Query: 88  VGDLSED-VPDDLEGLDAAAAHVVNLLSTEPTDTFEHFDSQLLQVKLGVGGFSMGAATAL 146
              +SED VP      D  + + +  +   PT    ++D++L +V  G   + MG    +
Sbjct: 199 --TISEDKVPSG----DPTSEYHIYAMEWTPTALKFYYDNELFKVIYGSPDYEMGTILNI 252

Query: 147 YS 148
           Y+
Sbjct: 253 YT 254


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.317    0.135    0.423 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,982,342
Number of Sequences: 62578
Number of extensions: 390213
Number of successful extensions: 1061
Number of sequences better than 100.0: 16
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1036
Number of HSP's gapped (non-prelim): 16
length of query: 268
length of database: 14,973,337
effective HSP length: 97
effective length of query: 171
effective length of database: 8,903,271
effective search space: 1522459341
effective search space used: 1522459341
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 50 (23.9 bits)