BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024381
(268 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P44439|PCNB_HAEIN Probable poly(A) polymerase OS=Haemophilus influenzae (strain ATCC
51907 / DSM 11121 / KW20 / Rd) GN=pcnB PE=3 SV=1
Length = 452
Score = 119 bits (298), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 114/213 (53%), Gaps = 3/213 (1%)
Query: 1 MLNRIPKDFDIITSAELKEVVRVFS-QCEIVGKRFPICHVHFENTIVEVSSF--STSGRR 57
+L + PKDFD+ T+A +++ +F QC +VG+RF + H+ F I+EV++F + S R
Sbjct: 61 LLGKKPKDFDVATNARPEQIQNIFQRQCRLVGRRFRLAHIMFGRDIIEVATFRANHSDAR 120
Query: 58 FSRDFKYEFERPIGCDEKDFIRWRNCLQRDFTINGLMFDPYAKIIYDYIGGIEDIRKAKV 117
K E + D ++ +RDFT+N L ++P + DY GI+D++ K+
Sbjct: 121 NENQAKQSNEGMLLRDNVYGTIEQDAARRDFTVNALYYNPQDNTLRDYFEGIKDLKAGKL 180
Query: 118 QTVIPASTSFQEDCARILRAIRIAARLGFRFSRETAHFVKHLSPSILKLDRGRLLMEMNY 177
+ + T +QED R+LR+IR A+L + + ++ L+P + + RL E
Sbjct: 181 RLIGDPVTRYQEDPVRMLRSIRFMAKLDMFLEKPSEQPIRELAPLLKNIPPARLFDESLK 240
Query: 178 MLAYGSAEASLRLLWKFGLLEVLLPIQAAYLVK 210
+L G + RLL ++GL E L P +AY +
Sbjct: 241 LLQAGQGVKTYRLLRQYGLFEQLFPALSAYFTE 273
>sp|P0ABF1|PCNB_ECOLI Poly(A) polymerase OS=Escherichia coli (strain K12) GN=pcnB PE=1
SV=2
Length = 465
Score = 116 bits (290), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 117/221 (52%), Gaps = 15/221 (6%)
Query: 1 MLNRIPKDFDIITSAELKEVVRVFSQCEIVGKRFPICHVHFENTIVEVSSF------STS 54
+L + PKDFD+ T+A ++V ++F C +VG+RF + HV F I+EV++F + S
Sbjct: 73 LLGKKPKDFDVTTNATPEQVRKLFRNCRLVGRRFRLAHVMFGPEIIEVATFRGHHEGNVS 132
Query: 55 GRRFSRDFKYEF---ERPIGCDEKDFIRWRNCLQRDFTINGLMFDPYAKIIYDYIGGIED 111
R S+ + + G E+D R RDFTIN L + + DY+GG++D
Sbjct: 133 DRTTSQRGQNGMLLRDNIFGSIEEDAQR------RDFTINSLYYSVADFTVRDYVGGMKD 186
Query: 112 IRKAKVQTVIPASTSFQEDCARILRAIRIAARLGFRFSRETAHFVKHLSPSILKLDRGRL 171
++ ++ + T ++ED R+LRA+R AA+LG R S ETA + L+ + + RL
Sbjct: 187 LKDGVIRLIGNPETRYREDPVRMLRAVRFAAKLGMRISPETAEPIPRLATLLNDIPPARL 246
Query: 172 LMEMNYMLAYGSAEASLRLLWKFGLLEVLLPIQAAYLVKHG 212
E +L G + +LL ++ L + L P Y ++G
Sbjct: 247 FEESLKLLQAGYGYETYKLLCEYHLFQPLFPTITRYFTENG 287
>sp|P0ABF2|PCNB_ECOL6 Poly(A) polymerase OS=Escherichia coli O6:H1 (strain CFT073 / ATCC
700928 / UPEC) GN=pcnB PE=3 SV=2
Length = 465
Score = 116 bits (290), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 117/221 (52%), Gaps = 15/221 (6%)
Query: 1 MLNRIPKDFDIITSAELKEVVRVFSQCEIVGKRFPICHVHFENTIVEVSSF------STS 54
+L + PKDFD+ T+A ++V ++F C +VG+RF + HV F I+EV++F + S
Sbjct: 73 LLGKKPKDFDVTTNATPEQVRKLFRNCRLVGRRFRLAHVMFGPEIIEVATFRGHHEGNVS 132
Query: 55 GRRFSRDFKYEF---ERPIGCDEKDFIRWRNCLQRDFTINGLMFDPYAKIIYDYIGGIED 111
R S+ + + G E+D R RDFTIN L + + DY+GG++D
Sbjct: 133 DRTTSQRGQNGMLLRDNIFGSIEEDAQR------RDFTINSLYYSVADFTVRDYVGGMKD 186
Query: 112 IRKAKVQTVIPASTSFQEDCARILRAIRIAARLGFRFSRETAHFVKHLSPSILKLDRGRL 171
++ ++ + T ++ED R+LRA+R AA+LG R S ETA + L+ + + RL
Sbjct: 187 LKDGVIRLIGNPETRYREDPVRMLRAVRFAAKLGMRISPETAEPIPRLATLLNDIPPARL 246
Query: 172 LMEMNYMLAYGSAEASLRLLWKFGLLEVLLPIQAAYLVKHG 212
E +L G + +LL ++ L + L P Y ++G
Sbjct: 247 FEESLKLLQAGYGYETYKLLCEYHLFQPLFPTITRYFTENG 287
>sp|P0ABF3|PCNB_ECO57 Poly(A) polymerase OS=Escherichia coli O157:H7 GN=pcnB PE=3 SV=2
Length = 465
Score = 116 bits (290), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 117/221 (52%), Gaps = 15/221 (6%)
Query: 1 MLNRIPKDFDIITSAELKEVVRVFSQCEIVGKRFPICHVHFENTIVEVSSF------STS 54
+L + PKDFD+ T+A ++V ++F C +VG+RF + HV F I+EV++F + S
Sbjct: 73 LLGKKPKDFDVTTNATPEQVRKLFRNCRLVGRRFRLAHVMFGPEIIEVATFRGHHEGNVS 132
Query: 55 GRRFSRDFKYEF---ERPIGCDEKDFIRWRNCLQRDFTINGLMFDPYAKIIYDYIGGIED 111
R S+ + + G E+D R RDFTIN L + + DY+GG++D
Sbjct: 133 DRTTSQRGQNGMLLRDNIFGSIEEDAQR------RDFTINSLYYSVADFTVRDYVGGMKD 186
Query: 112 IRKAKVQTVIPASTSFQEDCARILRAIRIAARLGFRFSRETAHFVKHLSPSILKLDRGRL 171
++ ++ + T ++ED R+LRA+R AA+LG R S ETA + L+ + + RL
Sbjct: 187 LKDGVIRLIGNPETRYREDPVRMLRAVRFAAKLGMRISPETAEPIPRLATLLNDIPPARL 246
Query: 172 LMEMNYMLAYGSAEASLRLLWKFGLLEVLLPIQAAYLVKHG 212
E +L G + +LL ++ L + L P Y ++G
Sbjct: 247 FEESLKLLQAGYGYETYKLLCEYHLFQPLFPTITRYFTENG 287
>sp|Q8Z9C3|PCNB_SALTI Poly(A) polymerase OS=Salmonella typhi GN=pcnB PE=3 SV=2
Length = 465
Score = 113 bits (282), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 116/221 (52%), Gaps = 15/221 (6%)
Query: 1 MLNRIPKDFDIITSAELKEVVRVFSQCEIVGKRFPICHVHFENTIVEVSSF------STS 54
+L + PKDFD+ T+A +V ++F C +VG+RF + HV F I+EV++F S S
Sbjct: 73 LLGKKPKDFDVTTNATPDQVRKLFRNCRLVGRRFRLAHVMFGPEIIEVATFRGHNEGSES 132
Query: 55 GRRFSRDFKYEF---ERPIGCDEKDFIRWRNCLQRDFTINGLMFDPYAKIIYDYIGGIED 111
R S+ + + G E+D R RDFTIN L + + DY+GG++D
Sbjct: 133 DRTTSQRGQNGMLLRDNIFGSIEEDAQR------RDFTINSLYYSVADFTVRDYVGGMQD 186
Query: 112 IRKAKVQTVIPASTSFQEDCARILRAIRIAARLGFRFSRETAHFVKHLSPSILKLDRGRL 171
+++ ++ + T ++ED R+LRA+R AA+L R S ETA + L+ + + RL
Sbjct: 187 LQEGVIRLIGNPETRYREDPVRMLRAVRFAAKLNMRISPETAEPIPRLATLLNDIPPARL 246
Query: 172 LMEMNYMLAYGSAEASLRLLWKFGLLEVLLPIQAAYLVKHG 212
E +L G+ + + L ++ L + L P Y ++G
Sbjct: 247 FEESLKLLQAGNGFETYQQLREYHLFQPLFPTITRYFTENG 287
>sp|Q8ZRQ8|PCNB_SALTY Poly(A) polymerase OS=Salmonella typhimurium (strain LT2 / SGSC1412
/ ATCC 700720) GN=pcnB PE=3 SV=2
Length = 465
Score = 112 bits (279), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 115/221 (52%), Gaps = 15/221 (6%)
Query: 1 MLNRIPKDFDIITSAELKEVVRVFSQCEIVGKRFPICHVHFENTIVEVSSF------STS 54
+L + PKDFD+ T+A +V ++F C +VG+RF + HV F I+EV++F S S
Sbjct: 73 LLGKKPKDFDVTTNATPDQVRKLFRNCRLVGRRFRLAHVMFGPEIIEVATFRGHHEGSES 132
Query: 55 GRRFSRDFKYEF---ERPIGCDEKDFIRWRNCLQRDFTINGLMFDPYAKIIYDYIGGIED 111
R S+ + + G E+D R RDFTIN L + + DY+GG++D
Sbjct: 133 DRTTSQRGQNGMLLRDNIFGSIEEDAQR------RDFTINSLYYSVADFTVRDYVGGMQD 186
Query: 112 IRKAKVQTVIPASTSFQEDCARILRAIRIAARLGFRFSRETAHFVKHLSPSILKLDRGRL 171
+++ ++ + T ++ED R+LRA+R AA+L S ETA + L+ + + RL
Sbjct: 187 LQEGVIRLIGNPETRYREDPVRMLRAVRFAAKLNMHISPETAEPIPRLATLLNDIPPARL 246
Query: 172 LMEMNYMLAYGSAEASLRLLWKFGLLEVLLPIQAAYLVKHG 212
E +L G+ + + L ++ L + L P Y ++G
Sbjct: 247 FEESLKLLQAGNGYETYQQLREYHLFQPLFPTITRYFTENG 287
>sp|A4IQ63|CCA_GEOTN CCA-adding enzyme OS=Geobacillus thermodenitrificans (strain
NG80-2) GN=cca PE=3 SV=1
Length = 404
Score = 90.1 bits (222), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 102/198 (51%), Gaps = 12/198 (6%)
Query: 1 MLNRIPKDFDIITSAELKEVVRVFSQCEIVGKRFPICHVHFENTIVEVSSFSTSGRRFSR 60
+L R D DI TSA EV+ +F + VG + V E T EV++F T G
Sbjct: 33 LLGRPIGDVDIATSALPDEVMAIFPKTIDVGSKHGTVVVVHEGTAYEVTTFRTDG----- 87
Query: 61 DFKYEFERPIGCDEKDFIR--WRNCLQRDFTINGLMFDPYAKIIYDYIGGIEDIRKAKVQ 118
D++ + RP + F+R + +RDFT+N + D + II D GG E I K ++
Sbjct: 88 DYE-DHRRP---ESVTFVRSLEEDLKRRDFTMNAIAMDEHGTII-DPFGGQEAIEKRLIR 142
Query: 119 TVIPASTSFQEDCARILRAIRIAARLGFRFSRETAHFVKHLSPSILKLDRGRLLMEMNYM 178
TV A F+ED R++RA+R ++LGF + +T + +P + + R+ MEM +
Sbjct: 143 TVGEADARFREDALRMMRAVRFVSQLGFSLAIDTKKAIIANAPLLAHISVERMTMEMEKL 202
Query: 179 LAYGSAEASLRLLWKFGL 196
LA A +L LL + GL
Sbjct: 203 LAGPFAAEALPLLAETGL 220
>sp|Q5KXX0|CCA_GEOKA CCA-adding enzyme OS=Geobacillus kaustophilus (strain HTA426)
GN=cca PE=3 SV=1
Length = 404
Score = 88.2 bits (217), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 103/207 (49%), Gaps = 12/207 (5%)
Query: 1 MLNRIPKDFDIITSAELKEVVRVFSQCEIVGKRFPICHVHFENTIVEVSSFSTSGRRFSR 60
++ R D DI TSA +EV+R+F + VG + V E T EV++F T G
Sbjct: 33 LIGRAIGDVDIATSALPEEVMRLFPKTIDVGSKHGTVVVVHEGTAYEVTTFRTDG----- 87
Query: 61 DFKYEFERPIGCDEKDFIR--WRNCLQRDFTINGLMFDPYAKIIYDYIGGIEDIRKAKVQ 118
D++ + RP + F+R + +RDFT+N + D II D GG E I + +
Sbjct: 88 DYE-DHRRP---ESVTFVRSLEEDLKRRDFTMNAIAMDERGTII-DPFGGQEAIERRLIC 142
Query: 119 TVIPASTSFQEDCARILRAIRIAARLGFRFSRETAHFVKHLSPSILKLDRGRLLMEMNYM 178
TV A F+ED R++RA+R ++LGF S +T + +P + + R+ MEM +
Sbjct: 143 TVGAADERFREDALRMMRAVRFVSQLGFALSEDTKSAIVQNAPLMAHISVERMTMEMEKL 202
Query: 179 LAYGSAEASLRLLWKFGLLEVLLPIQA 205
LA +L LL GL L + A
Sbjct: 203 LAGPFVAEALPLLADTGLFAYLPGLAA 229
>sp|A8FEH9|CCA_BACP2 CCA-adding enzyme OS=Bacillus pumilus (strain SAFR-032) GN=cca PE=3
SV=1
Length = 400
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 93/180 (51%), Gaps = 18/180 (10%)
Query: 1 MLNRIPKDFDIITSAELKEVVRVFSQCEIVGKRFPICHVHFENTIVEVSSFSTSGRRFSR 60
+L R D DI T A V +F + VGK V + EV++F T
Sbjct: 33 LLGREIGDIDIATDATPDTVESLFEKTVDVGKEHGTVIVLHDGMSYEVTTFRTES----- 87
Query: 61 DFKYE-FERPIGCDEKDFIRW--RNCLQRDFTINGLMFDPYAKIIYDYIGGIEDIRKAKV 117
+YE F RP E FI + L+RD TIN + D +II D++GG +DI + ++
Sbjct: 88 --EYEDFRRP---KEVAFITSLKEDLLRRDLTINAMAMDINGEII-DHVGGKQDIERKRI 141
Query: 118 QTVIPASTSFQEDCARILRAIRIAARLGFRFSRETAHFV---KHLSPSILKLDRGRLLME 174
QTV + FQED R++RAIR ++LGF + ETA + KHL +I ++R ++ ME
Sbjct: 142 QTVGDPACRFQEDALRMMRAIRFLSQLGFELAAETAEAMEKDKHLLANI-SVERKKIEME 200
>sp|Q7SIB1|CCA_GEOSE CCA-adding enzyme OS=Geobacillus stearothermophilus GN=cca PE=1
SV=1
Length = 404
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 102/198 (51%), Gaps = 12/198 (6%)
Query: 1 MLNRIPKDFDIITSAELKEVVRVFSQCEIVGKRFPICHVHFENTIVEVSSFSTSGRRFSR 60
+L R D DI TSA ++V+ +F + VG + V + EV++F T G
Sbjct: 33 LLGRPIGDVDIATSALPEDVMAIFPKTIDVGSKHGTVVVVHKGKAYEVTTFKTDG----- 87
Query: 61 DFKYEFERPIGCDEKDFIR--WRNCLQRDFTINGLMFDPYAKIIYDYIGGIEDIRKAKVQ 118
D++ ++ RP + F+R + +RDFT+N + D Y II D GG E IR+ ++
Sbjct: 88 DYE-DYRRP---ESVTFVRSLEEDLKRRDFTMNAIAMDEYGTII-DPFGGREAIRRRIIR 142
Query: 119 TVIPASTSFQEDCARILRAIRIAARLGFRFSRETAHFVKHLSPSILKLDRGRLLMEMNYM 178
TV A F+ED R++RA+R + LGF + +T + +P + + R+ MEM +
Sbjct: 143 TVGEAEKRFREDALRMMRAVRFVSELGFALAPDTEQAIVQNAPLLAHISVERMTMEMEKL 202
Query: 179 LAYGSAEASLRLLWKFGL 196
L A +L LL + GL
Sbjct: 203 LGGPFAARALPLLAETGL 220
>sp|Q65I54|CCA_BACLD CCA-adding enzyme OS=Bacillus licheniformis (strain DSM 13 / ATCC
14580) GN=cca PE=3 SV=1
Length = 397
Score = 81.3 bits (199), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 87/182 (47%), Gaps = 14/182 (7%)
Query: 1 MLNRIPKDFDIITSAELKEVVRVFSQCEIVGKRFPICHVHFENTIVEVSSFSTSGRRFSR 60
+NR D DI T A +E+ +F + VGK V FE EV++F
Sbjct: 33 QMNRDVGDIDIATDASPEEIEAIFPKTVDVGKEHGTIIVLFEGESYEVTTFRA------- 85
Query: 61 DFKYE-FERPIGCDEKDFIRW--RNCLQRDFTINGLMFDPYAKIIYDYIGGIEDIRKAKV 117
+ +YE + RP G FI+ + +RD TIN + D ++I DY GG+ DIR+ +
Sbjct: 86 ELEYEDYRRPSGVQ---FIKSLKEDLKRRDLTINAMAMDEEGRLI-DYFGGLRDIRERLI 141
Query: 118 QTVIPASTSFQEDCARILRAIRIAARLGFRFSRETAHFVKHLSPSILKLDRGRLLMEMNY 177
QTV + F ED R+LRA+R ++L F S T + P + + R +E
Sbjct: 142 QTVGDPAERFHEDALRMLRALRFMSQLEFELSPNTKKAICENRPLLAHISTERKTVEFEK 201
Query: 178 ML 179
+L
Sbjct: 202 LL 203
>sp|Q2YY49|CCA_STAAB CCA-adding enzyme OS=Staphylococcus aureus (strain bovine RF122 /
ET3-1) GN=cca PE=3 SV=1
Length = 400
Score = 81.3 bits (199), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 95/193 (49%), Gaps = 12/193 (6%)
Query: 1 MLNRIPKDFDIITSAELKEVVRVFSQCEIVGKRFPICHVHFENTIVEVSSFSTSGRRFSR 60
++ R D DI TSA E+ +FS VGK +V F N EV++F R
Sbjct: 34 VMGRNIHDIDITTSATPDEIESIFSHTIPVGKEHGTINVVFNNENYEVTTF-----RAEE 88
Query: 61 DFKYEFERPIGCDEKDFIR--WRNCLQRDFTINGLMFDPYAKIIYDYIGGIEDIRKAKVQ 118
D+ + RP G F+R + + +RDFT+N + D K+ YDY G +DI ++
Sbjct: 89 DY-VDHRRPSGVT---FVRDLYEDLQRRDFTMNAIAMDTAYKL-YDYFDGQQDINNRIIR 143
Query: 119 TVIPASTSFQEDCARILRAIRIAARLGFRFSRETAHFVKHLSPSILKLDRGRLLMEMNYM 178
TV A+ FQED R++R +R ++L F + ET ++ I L R+++E+ +
Sbjct: 144 TVGIAAERFQEDALRMIRCLRFQSQLSFEIATETFEAMRTQMADIKFLSIERIVIELTKL 203
Query: 179 LAYGSAEASLRLL 191
+ + E S L
Sbjct: 204 MRGINVEKSFNHL 216
>sp|Q834S5|CCA_ENTFA CCA-adding enzyme OS=Enterococcus faecalis (strain ATCC 700802 /
V583) GN=cca PE=3 SV=1
Length = 406
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 87/181 (48%), Gaps = 12/181 (6%)
Query: 1 MLNRIPKDFDIITSAELKEVVRVFSQCEIVGKRFPICHVHFENTIVEVSSFSTSGRRFSR 60
+LN+ D DI TSA +E+ ++F + VG V E+ EV++F T
Sbjct: 38 LLNKPIHDVDIATSAYPEEIKQIFKRTVDVGIEHGTVLVLMEDQQYEVTTFRTESTY--- 94
Query: 61 DFKYEFERPIGCDEKDFIRW--RNCLQRDFTINGLMFDPYAKIIYDYIGGIEDIRKAKVQ 118
+F RP DE F+R + +RDFTIN L D +II D GIED+ ++
Sbjct: 95 ---QDFRRP---DEVTFVRSLKEDLKRRDFTINALALDSTGEII-DLFDGIEDLTNQTIR 147
Query: 119 TVIPASTSFQEDCARILRAIRIAARLGFRFSRETAHFVKHLSPSILKLDRGRLLMEMNYM 178
V F ED R++R +R A++L F+ +T + P + K+ R+ +E M
Sbjct: 148 AVGNPHERFHEDALRMMRGLRFASQLDFKIEEKTLAAIAEFHPLLEKISVERITIEFVKM 207
Query: 179 L 179
L
Sbjct: 208 L 208
>sp|Q8CP70|CCA_STAES CCA-adding enzyme OS=Staphylococcus epidermidis (strain ATCC 12228)
GN=cca PE=3 SV=1
Length = 400
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 95/193 (49%), Gaps = 12/193 (6%)
Query: 1 MLNRIPKDFDIITSAELKEVVRVFSQCEIVGKRFPICHVHFENTIVEVSSFSTSGRRFSR 60
++ R D DI TSA E+ +F + VGK +V F+N E+++F S
Sbjct: 34 IMQRPIHDVDITTSATPDEIESIFDKTIPVGKEHGTINVVFQNDNYEITTFR------SE 87
Query: 61 DFKYEFERPIGCDEKDFIR--WRNCLQRDFTINGLMFDPYAKIIYDYIGGIEDIRKAKVQ 118
D + RP E F+R +++ +RDFT+N + D ++ YDY G +DI ++
Sbjct: 88 DEYIDHRRP---SEVYFVRDLYQDVQRRDFTMNAIAMDLNYRL-YDYFNGQQDINNRVIR 143
Query: 119 TVIPASTSFQEDCARILRAIRIAARLGFRFSRETAHFVKHLSPSILKLDRGRLLMEMNYM 178
TV S F ED RI+R +R ++L F+ +T H + I L R+++E+ +
Sbjct: 144 TVGVPSERFSEDALRIIRGLRFQSQLNFQIDSDTLHAMSSQISDIQYLSVERVVVELKKL 203
Query: 179 LAYGSAEASLRLL 191
+ + + S ++
Sbjct: 204 IMGNNVKQSFEVM 216
>sp|Q5HP86|CCA_STAEQ CCA-adding enzyme OS=Staphylococcus epidermidis (strain ATCC 35984
/ RP62A) GN=cca PE=3 SV=1
Length = 400
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 95/193 (49%), Gaps = 12/193 (6%)
Query: 1 MLNRIPKDFDIITSAELKEVVRVFSQCEIVGKRFPICHVHFENTIVEVSSFSTSGRRFSR 60
++ R D DI TSA E+ +F + VGK +V F+N E+++F S
Sbjct: 34 IMQRPIHDVDITTSATPDEIESIFDKTIPVGKEHGTINVVFQNDNYEITTFR------SE 87
Query: 61 DFKYEFERPIGCDEKDFIR--WRNCLQRDFTINGLMFDPYAKIIYDYIGGIEDIRKAKVQ 118
D + RP E F+R +++ +RDFT+N + D ++ YDY G +DI ++
Sbjct: 88 DEYIDHRRP---SEVYFVRDLYQDVQRRDFTMNAIAMDLNYRL-YDYFNGQQDINNRVIR 143
Query: 119 TVIPASTSFQEDCARILRAIRIAARLGFRFSRETAHFVKHLSPSILKLDRGRLLMEMNYM 178
TV S F ED RI+R +R ++L F+ +T H + I L R+++E+ +
Sbjct: 144 TVGVPSERFSEDALRIIRGLRFQSQLNFQIDSDTLHAMSSQISDIQYLSVERVVVELKKL 203
Query: 179 LAYGSAEASLRLL 191
+ + + S ++
Sbjct: 204 IMGNNVKQSFEVM 216
>sp|P42977|CCA_BACSU CCA-adding enzyme OS=Bacillus subtilis (strain 168) GN=cca PE=3
SV=2
Length = 397
Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 95/204 (46%), Gaps = 18/204 (8%)
Query: 2 LNRIPKDFDIITSAELKEVVRVFSQCEIVGKRFPICHVHFENTIVEVSSFSTSGRRFSRD 61
+ R D DI T A +V R+F + VGK V +E+ EV++F T D
Sbjct: 34 MKRTIGDVDIATDAAPDQVERLFQRTVDVGKEHGTIIVLWEDETYEVTTFRTES-----D 88
Query: 62 FKYEFERP-----IGCDEKDFIRWRNCLQRDFTINGLMFDPYAKIIYDYIGGIEDIRKAK 116
+ +F RP I E+D R RD TIN + K++ DY GG +DI +
Sbjct: 89 Y-VDFRRPSEVQFISSLEEDLKR------RDLTINAMAMTADGKVL-DYFGGKKDIDQKV 140
Query: 117 VQTVIPASTSFQEDCARILRAIRIAARLGFRFSRETAHFVKHLSPSILKLDRGRLLMEMN 176
++TV FQED R+LRA+R ++LGF S ET + + + R +E
Sbjct: 141 IRTVGKPEDRFQEDALRMLRAVRFMSQLGFTLSPETEEAIAKEKSLLSHVSVERKTIEFE 200
Query: 177 YMLAYGSAEASLRLLWKFGLLEVL 200
+L ++ +L+ L + L E L
Sbjct: 201 KLLQGRASRQALQTLIQTRLYEEL 224
>sp|Q6GGV2|CCA_STAAR CCA-adding enzyme OS=Staphylococcus aureus (strain MRSA252) GN=cca
PE=3 SV=1
Length = 400
Score = 78.6 bits (192), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 94/193 (48%), Gaps = 12/193 (6%)
Query: 1 MLNRIPKDFDIITSAELKEVVRVFSQCEIVGKRFPICHVHFENTIVEVSSFSTSGRRFSR 60
++ R D DI TSA E+ +FS VGK +V F + EV++F R
Sbjct: 34 VMGRNIHDIDITTSATPDEIESIFSHTIPVGKEHGTINVVFNDENYEVTTF-----RAEE 88
Query: 61 DFKYEFERPIGCDEKDFIR--WRNCLQRDFTINGLMFDPYAKIIYDYIGGIEDIRKAKVQ 118
D+ + RP G F+R + + +RDFT+N + D K+ YDY G +DI ++
Sbjct: 89 DY-VDHRRPSGVT---FVRDLYEDLQRRDFTMNAIAMDTANKL-YDYFDGQQDINNRIIR 143
Query: 119 TVIPASTSFQEDCARILRAIRIAARLGFRFSRETAHFVKHLSPSILKLDRGRLLMEMNYM 178
TV A FQED R++R +R ++L F + ET ++ I L R+++E+ +
Sbjct: 144 TVGIAEERFQEDALRMIRCLRFQSQLSFDIATETFEAMRTQMADIKFLSIERIVIELTKL 203
Query: 179 LAYGSAEASLRLL 191
+ + E S L
Sbjct: 204 MRGINVEKSFNHL 216
>sp|Q7A5K2|CCA_STAAN CCA-adding enzyme OS=Staphylococcus aureus (strain N315) GN=cca
PE=3 SV=1
Length = 400
Score = 77.8 bits (190), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 94/193 (48%), Gaps = 12/193 (6%)
Query: 1 MLNRIPKDFDIITSAELKEVVRVFSQCEIVGKRFPICHVHFENTIVEVSSFSTSGRRFSR 60
++ R D DI TSA E+ +FS VGK +V F + EV++F R
Sbjct: 34 VMGRNIHDIDITTSATPDEIESIFSHTIPVGKEHGTINVVFNDENYEVTTF-----RAEE 88
Query: 61 DFKYEFERPIGCDEKDFIR--WRNCLQRDFTINGLMFDPYAKIIYDYIGGIEDIRKAKVQ 118
D+ + RP G F+R + + +RDFT+N + D K+ YDY G +DI ++
Sbjct: 89 DY-VDHRRPSGVT---FVRDLYEDLQRRDFTMNAIAMDTAYKL-YDYFDGQQDINNRIIR 143
Query: 119 TVIPASTSFQEDCARILRAIRIAARLGFRFSRETAHFVKHLSPSILKLDRGRLLMEMNYM 178
TV A FQED R++R +R ++L F + ET ++ I L R+++E+ +
Sbjct: 144 TVGIAEERFQEDALRMIRCLRFQSQLSFDIAMETFEAMRTQMADIKFLSIERIVIELTKL 203
Query: 179 LAYGSAEASLRLL 191
+ + E S L
Sbjct: 204 MRGINVEESFNHL 216
>sp|Q99U32|CCA_STAAM CCA-adding enzyme OS=Staphylococcus aureus (strain Mu50 / ATCC
700699) GN=cca PE=3 SV=1
Length = 400
Score = 77.8 bits (190), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 94/193 (48%), Gaps = 12/193 (6%)
Query: 1 MLNRIPKDFDIITSAELKEVVRVFSQCEIVGKRFPICHVHFENTIVEVSSFSTSGRRFSR 60
++ R D DI TSA E+ +FS VGK +V F + EV++F R
Sbjct: 34 VMGRNIHDIDITTSATPDEIESIFSHTIPVGKEHGTINVVFNDENYEVTTF-----RAEE 88
Query: 61 DFKYEFERPIGCDEKDFIR--WRNCLQRDFTINGLMFDPYAKIIYDYIGGIEDIRKAKVQ 118
D+ + RP G F+R + + +RDFT+N + D K+ YDY G +DI ++
Sbjct: 89 DY-VDHRRPSGVT---FVRDLYEDLQRRDFTMNAIAMDTAYKL-YDYFDGQQDINNRIIR 143
Query: 119 TVIPASTSFQEDCARILRAIRIAARLGFRFSRETAHFVKHLSPSILKLDRGRLLMEMNYM 178
TV A FQED R++R +R ++L F + ET ++ I L R+++E+ +
Sbjct: 144 TVGIAEERFQEDALRMIRCLRFQSQLSFDIAMETFEAMRTQMADIKFLSIERIVIELTKL 203
Query: 179 LAYGSAEASLRLL 191
+ + E S L
Sbjct: 204 MRGINVEESFNHL 216
>sp|A7X2F4|CCA_STAA1 CCA-adding enzyme OS=Staphylococcus aureus (strain Mu3 / ATCC
700698) GN=cca PE=3 SV=1
Length = 400
Score = 77.8 bits (190), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 94/193 (48%), Gaps = 12/193 (6%)
Query: 1 MLNRIPKDFDIITSAELKEVVRVFSQCEIVGKRFPICHVHFENTIVEVSSFSTSGRRFSR 60
++ R D DI TSA E+ +FS VGK +V F + EV++F R
Sbjct: 34 VMGRNIHDIDITTSATPDEIESIFSHTIPVGKEHGTINVVFNDENYEVTTF-----RAEE 88
Query: 61 DFKYEFERPIGCDEKDFIR--WRNCLQRDFTINGLMFDPYAKIIYDYIGGIEDIRKAKVQ 118
D+ + RP G F+R + + +RDFT+N + D K+ YDY G +DI ++
Sbjct: 89 DY-VDHRRPSGVT---FVRDLYEDLQRRDFTMNAIAMDTAYKL-YDYFDGQQDINNRIIR 143
Query: 119 TVIPASTSFQEDCARILRAIRIAARLGFRFSRETAHFVKHLSPSILKLDRGRLLMEMNYM 178
TV A FQED R++R +R ++L F + ET ++ I L R+++E+ +
Sbjct: 144 TVGIAEERFQEDALRMIRCLRFQSQLSFDIAMETFEAMRTQMADIKFLSIERIVIELTKL 203
Query: 179 LAYGSAEASLRLL 191
+ + E S L
Sbjct: 204 MRGINVEESFNHL 216
>sp|B7GHS8|CCA_ANOFW CCA-adding enzyme OS=Anoxybacillus flavithermus (strain DSM 21510 /
WK1) GN=cca PE=3 SV=1
Length = 397
Score = 77.8 bits (190), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 93/183 (50%), Gaps = 21/183 (11%)
Query: 1 MLNRIPKDFDIITSAELKEVVRVFSQCEIVGKRFPICHVHFENTIVEVSSFSTSGRRFSR 60
+L R D DI TSA +EV+ +F + VG V EV++F GR
Sbjct: 33 LLQRPIGDIDIATSAHPQEVMAIFPRTVPVGIAHGTVMVIERGISYEVTTFRKEGR---- 88
Query: 61 DFKYE-FERPIGCDEKDFIRWRN--CLQRDFTINGLMFDPYAKIIYDYIGGIEDIRKAKV 117
YE + RP + F+R N +RDFT+N + + Y +II D GG+E +++ +
Sbjct: 89 ---YEDYRRP---KDVTFVRSLNEDLQRRDFTMNAIAMNEYGEII-DPFGGVEALKQRII 141
Query: 118 QTVIPASTSFQEDCARILRAIRIAARLGFRFSRET-------AHFVKHLSPSILKLDRGR 170
+TV + F ED R++RA+R ++LGF S ET H ++H++ + ++ +
Sbjct: 142 ETVGDPAERFNEDALRMMRALRFVSQLGFSLSTETKQAIIRYGHLLQHIAVERIAVEFEK 201
Query: 171 LLM 173
LL+
Sbjct: 202 LLL 204
>sp|A8Z437|CCA_STAAT CCA-adding enzyme OS=Staphylococcus aureus (strain USA300 /
TCH1516) GN=cca PE=3 SV=1
Length = 400
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 94/193 (48%), Gaps = 12/193 (6%)
Query: 1 MLNRIPKDFDIITSAELKEVVRVFSQCEIVGKRFPICHVHFENTIVEVSSFSTSGRRFSR 60
++ R D DI TSA E+ +FS VGK +V F + EV++F R
Sbjct: 34 VMGRNIHDIDITTSATPDEIESIFSHTIPVGKEHGTINVVFNDENYEVTTF-----RAEE 88
Query: 61 DFKYEFERPIGCDEKDFIR--WRNCLQRDFTINGLMFDPYAKIIYDYIGGIEDIRKAKVQ 118
D+ + RP G F+R + + +RDFT+N + D K+ YDY G +DI ++
Sbjct: 89 DY-VDHRRPSGVT---FVRDLYEDLQRRDFTMNAIAMDTAYKL-YDYFDGQQDINNRIIR 143
Query: 119 TVIPASTSFQEDCARILRAIRIAARLGFRFSRETAHFVKHLSPSILKLDRGRLLMEMNYM 178
TV A FQED R++R +R ++L F + ET ++ I L R+++E+ +
Sbjct: 144 TVGIAEERFQEDALRMIRCLRFQSQLSFDIATETFEAMRIQMADIKFLSIERIVIELTKL 203
Query: 179 LAYGSAEASLRLL 191
+ + E S L
Sbjct: 204 MRGINVEKSFNHL 216
>sp|A6QH08|CCA_STAAE CCA-adding enzyme OS=Staphylococcus aureus (strain Newman) GN=cca
PE=3 SV=1
Length = 400
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 94/193 (48%), Gaps = 12/193 (6%)
Query: 1 MLNRIPKDFDIITSAELKEVVRVFSQCEIVGKRFPICHVHFENTIVEVSSFSTSGRRFSR 60
++ R D DI TSA E+ +FS VGK +V F + EV++F R
Sbjct: 34 VMGRNIHDIDITTSATPDEIESIFSHTIPVGKEHGTINVVFNDENYEVTTF-----RAEE 88
Query: 61 DFKYEFERPIGCDEKDFIR--WRNCLQRDFTINGLMFDPYAKIIYDYIGGIEDIRKAKVQ 118
D+ + RP G F+R + + +RDFT+N + D K+ YDY G +DI ++
Sbjct: 89 DY-VDHRRPSGVT---FVRDLYEDLQRRDFTMNAIAMDTAYKL-YDYFDGQQDINNRIIR 143
Query: 119 TVIPASTSFQEDCARILRAIRIAARLGFRFSRETAHFVKHLSPSILKLDRGRLLMEMNYM 178
TV A FQED R++R +R ++L F + ET ++ I L R+++E+ +
Sbjct: 144 TVGIAEERFQEDALRMIRCLRFQSQLSFDIATETFEAMRIQMADIKFLSIERIVIELTKL 203
Query: 179 LAYGSAEASLRLL 191
+ + E S L
Sbjct: 204 MRGINVEKSFNHL 216
>sp|Q5HFW6|CCA_STAAC CCA-adding enzyme OS=Staphylococcus aureus (strain COL) GN=cca PE=3
SV=1
Length = 400
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 94/193 (48%), Gaps = 12/193 (6%)
Query: 1 MLNRIPKDFDIITSAELKEVVRVFSQCEIVGKRFPICHVHFENTIVEVSSFSTSGRRFSR 60
++ R D DI TSA E+ +FS VGK +V F + EV++F R
Sbjct: 34 VMGRNIHDIDITTSATPDEIESIFSHTIPVGKEHGTINVVFNDENYEVTTF-----RAEE 88
Query: 61 DFKYEFERPIGCDEKDFIR--WRNCLQRDFTINGLMFDPYAKIIYDYIGGIEDIRKAKVQ 118
D+ + RP G F+R + + +RDFT+N + D K+ YDY G +DI ++
Sbjct: 89 DY-VDHRRPSGVT---FVRDLYEDLQRRDFTMNAIAMDTAYKL-YDYFDGQQDINNRIIR 143
Query: 119 TVIPASTSFQEDCARILRAIRIAARLGFRFSRETAHFVKHLSPSILKLDRGRLLMEMNYM 178
TV A FQED R++R +R ++L F + ET ++ I L R+++E+ +
Sbjct: 144 TVGIAEERFQEDALRMIRCLRFQSQLSFDIATETFEAMRIQMADIKFLSIERIVIELTKL 203
Query: 179 LAYGSAEASLRLL 191
+ + E S L
Sbjct: 204 MRGINVEKSFNHL 216
>sp|Q8NWP0|CCA_STAAW CCA-adding enzyme OS=Staphylococcus aureus (strain MW2) GN=cca PE=3
SV=1
Length = 400
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 94/193 (48%), Gaps = 12/193 (6%)
Query: 1 MLNRIPKDFDIITSAELKEVVRVFSQCEIVGKRFPICHVHFENTIVEVSSFSTSGRRFSR 60
++ R D DI TSA E+ +FS VGK +V F + EV++F R
Sbjct: 34 VMGRNIHDIDITTSATPDEIESIFSHTIPVGKEHGTINVVFNDENYEVTTF-----RAEE 88
Query: 61 DFKYEFERPIGCDEKDFIR--WRNCLQRDFTINGLMFDPYAKIIYDYIGGIEDIRKAKVQ 118
D+ + RP G F+R + + +RDFT+N + D K+ YDY G +DI ++
Sbjct: 89 DY-VDHRRPSGVT---FVRDLYEDLQRRDFTMNAIAMDTAYKL-YDYFDGQQDINNRIIR 143
Query: 119 TVIPASTSFQEDCARILRAIRIAARLGFRFSRETAHFVKHLSPSILKLDRGRLLMEMNYM 178
TV A FQED R++R +R ++L F + ET ++ I L R+++E+ +
Sbjct: 144 TVGIAEERFQEDALRMIRCLRFQSQLSFDIATETFEAMRIQMADIKFLSIERIVIELTKL 203
Query: 179 LAYGSAEASLRLL 191
+ + E S L
Sbjct: 204 MRGINVEKSFNHL 216
>sp|Q6G9A5|CCA_STAAS CCA-adding enzyme OS=Staphylococcus aureus (strain MSSA476) GN=cca
PE=3 SV=1
Length = 400
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 94/193 (48%), Gaps = 12/193 (6%)
Query: 1 MLNRIPKDFDIITSAELKEVVRVFSQCEIVGKRFPICHVHFENTIVEVSSFSTSGRRFSR 60
++ R D DI TSA E+ +FS VGK +V F + EV++F R
Sbjct: 34 VMGRNIHDIDITTSATPDEIESIFSHTIPVGKEHGTINVVFNDENYEVTTF-----RAEE 88
Query: 61 DFKYEFERPIGCDEKDFIR--WRNCLQRDFTINGLMFDPYAKIIYDYIGGIEDIRKAKVQ 118
D+ + RP G F+R + + +RDFT+N + D K+ YDY G +DI ++
Sbjct: 89 DY-VDHRRPSGVT---FVRDLYEDLQRRDFTMNAIAMDTAYKL-YDYFDGQQDINNRIIR 143
Query: 119 TVIPASTSFQEDCARILRAIRIAARLGFRFSRETAHFVKHLSPSILKLDRGRLLMEMNYM 178
TV A FQED R++R +R ++L F + ET ++ I L R+++E+ +
Sbjct: 144 TVGIAEERFQEDALRMIRCLRFQSQLSFDIATETFEAMRIQMADIKFLSIERIVIELTKL 203
Query: 179 LAYGSAEASLRLL 191
+ + E S L
Sbjct: 204 MRGINVEKSFNHL 216
>sp|A7Z5Z6|CCA_BACA2 CCA-adding enzyme OS=Bacillus amyloliquefaciens (strain FZB42)
GN=cca PE=3 SV=1
Length = 396
Score = 76.6 bits (187), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 100/204 (49%), Gaps = 18/204 (8%)
Query: 2 LNRIPKDFDIITSAELKEVVRVFSQCEIVGKRFPICHVHFENTIVEVSSFSTSGRRFSRD 61
+ R D DI TSA EV R+F + VGK V +E+ EV++F R +
Sbjct: 34 MKRKIGDVDIATSASPNEVERLFKRTVDVGKEHGTVIVLWEDETYEVTTF-----RAESE 88
Query: 62 FKYEFERPIGCDEKDFIRWRNCL-----QRDFTINGLMFDPYAKIIYDYIGGIEDIRKAK 116
+K ++ RP + +R+ L +RD TIN + +++ DY GG DI +
Sbjct: 89 YK-DYRRP------EAVRFITSLSEDLKRRDLTINAMAMSAEGELL-DYFGGAHDIGQKL 140
Query: 117 VQTVIPASTSFQEDCARILRAIRIAARLGFRFSRETAHFVKHLSPSILKLDRGRLLMEMN 176
++TV F+ED R++RA+R ++LGF +ET V + + R +E
Sbjct: 141 IRTVGNPEDRFREDALRMMRAVRFMSQLGFLLEKETREAVIKDRELLAHVSVERKTVEFE 200
Query: 177 YMLAYGSAEASLRLLWKFGLLEVL 200
+L S++ +++ + + GL++ L
Sbjct: 201 KLLQGASSQEAIQTMVQTGLIQEL 224
>sp|C5D3B5|CCA_GEOSW CCA-adding enzyme OS=Geobacillus sp. (strain WCH70) GN=cca PE=3
SV=1
Length = 404
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 1 MLNRIPKDFDIITSAELKEVVRVFSQCEIVGKRFPICHVHFENTIVEVSSFSTSGRRFSR 60
+LNR D DI TSA EV+++F + +G + V EV++F T
Sbjct: 33 LLNREIGDIDIATSALPDEVMQLFPKTIDIGSQHGTVVVVHNGISYEVTTFRTES----- 87
Query: 61 DFKYE-FERPIGCDEKDFIR--WRNCLQRDFTINGLMFDPYAKIIYDYIGGIEDIRKAKV 117
+YE + RP F+R + + +RDFT+N + D K+I D GG E I +
Sbjct: 88 --EYEDYRRPGAVT---FVRSLYEDLQRRDFTMNAIAMDAEGKLI-DPFGGQEAIANRII 141
Query: 118 QTVIPASTSFQEDCARILRAIRIAARLGFRFSRETAHFVKHLSPSILKLDRGRLLMEMNY 177
TV F ED R++RAIR +LGF ET + + + + R+ ME
Sbjct: 142 CTVGDPKARFSEDALRMMRAIRFVGQLGFSLDEETKQAIIENAALLAHISVERMTMEFEK 201
Query: 178 MLAYGSAEASLRLLWKFGLLEVLLPI 203
+L A +L LL + GL + LP+
Sbjct: 202 LLEGPFASRALSLLVETGLF-LYLPM 226
>sp|Q03Y57|CCA_LEUMM CCA-adding enzyme OS=Leuconostoc mesenteroides subsp. mesenteroides
(strain ATCC 8293 / NCDO 523) GN=cca PE=3 SV=1
Length = 401
Score = 75.5 bits (184), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 93/192 (48%), Gaps = 12/192 (6%)
Query: 1 MLNRIPKDFDIITSAELKEVVRVFSQCEIVGKRFPICHVHFENTIVEVSSFSTSGRRFSR 60
ML + D DI +SA +EV +F G + V T E+++F R
Sbjct: 38 MLGKTIHDVDIASSAFPEEVKSLFHNTVDTGIQHGTVMVLDHGTGYEITTF-----RVES 92
Query: 61 DFKYEFERPIGCDEKDFIR--WRNCLQRDFTINGLMFDPYAKIIYDYIGGIEDIRKAKVQ 118
+ +F RP D F+R + +RDFTIN L +++ D G+ED++K ++
Sbjct: 93 TYT-DFRRP---DHVTFVRSLEEDLKRRDFTINALAMRHDGEVL-DLFDGLEDMKKGVIR 147
Query: 119 TVIPASTSFQEDCARILRAIRIAARLGFRFSRETAHFVKHLSPSILKLDRGRLLMEMNYM 178
V A F ED R++RA+R +A+LGF +T + L+P++ K+ R+ +E +
Sbjct: 148 AVGDAEKRFTEDALRMMRALRFSAQLGFNIEADTQKALVDLAPNLAKIAVERVRVEFEKL 207
Query: 179 LAYGSAEASLRL 190
L A SL L
Sbjct: 208 LLGSQASQSLEL 219
>sp|B9DRX9|CCA_STRU0 CCA-adding enzyme OS=Streptococcus uberis (strain ATCC BAA-854 /
0140J) GN=cca PE=3 SV=1
Length = 403
Score = 74.3 bits (181), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 93/191 (48%), Gaps = 23/191 (12%)
Query: 1 MLNRIPKDFDIITSAELKEVVRVFSQCEIVGKRFPICHVHFENTIVEVSSFSTSGRRFSR 60
+L+R D DI TS+ +E +FS+ +G V + E+++F T
Sbjct: 38 LLDRPIHDVDIATSSYPEETKAIFSRTVDIGIEHGTVLVLENDAEYEITTFRTE------ 91
Query: 61 DFKYEFERPIGCDEKDFIR--WRNCLQRDFTINGLMFDPYAKIIYDYIGGIEDIRKAKVQ 118
D ++ RP F+R + +RDFT+N L D ++I D G++D+++ +++
Sbjct: 92 DIYVDYRRPSNVS---FVRSLEEDLKRRDFTVNALALDETGQVI-DKFHGLQDLKRKELR 147
Query: 119 TVIPASTSFQEDCARILRAIRIAARLGFRFSRET-------AHFVKHLSP--SILKLDRG 169
V A FQED RI+R R AA L F+ ET AH ++ +S S ++LD
Sbjct: 148 AVGKAEERFQEDALRIMRGFRFAASLDFKIEDETFEAMKTHAHLLQKISVERSFIELD-- 205
Query: 170 RLLMEMNYMLA 180
+L M N+ L
Sbjct: 206 KLFMAPNWKLG 216
>sp|Q4L6G1|CCA_STAHJ CCA-adding enzyme OS=Staphylococcus haemolyticus (strain JCSC1435)
GN=cca PE=3 SV=1
Length = 400
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 28/197 (14%)
Query: 1 MLNRIPKDFDIITSAELKEVVRVFSQCEIVGKRFPICHVHFENTIVEVSSFSTSG----- 55
++NR D DI TSA E+ +F + +G+ +V ++ T EV++F
Sbjct: 34 LMNRHIHDIDITTSATPDEIESIFEKTIPIGREHGTINVVYQGTNYEVTTFRAEAEYVDH 93
Query: 56 RR-----FSRDFKYEFERPIGCDEKDFIRWRNCLQRDFTINGLMFDPYAKIIYDYIGGIE 110
RR F RD K + +R RDFTIN + D I YDY G
Sbjct: 94 RRPSEVYFVRDLKEDLQR-----------------RDFTINAIAMDKNFNI-YDYFEGDV 135
Query: 111 DIRKAKVQTVIPASTSFQEDCARILRAIRIAARLGFRFSRETAHFVKHLSPSILKLDRGR 170
+ + ++TV A F+ED RILR +R ++L F +T +KH + L R
Sbjct: 136 ALNQHIIKTVGDAKERFKEDALRILRGLRFQSQLNFTIEGDTFEAMKHQIADVEHLSIER 195
Query: 171 LLMEMNYMLAYGSAEAS 187
+++E+ ++ + S
Sbjct: 196 IVVELKKLIKGQNVSQS 212
>sp|Q8CWQ3|CCA_STRR6 CCA-adding enzyme OS=Streptococcus pneumoniae (strain ATCC BAA-255
/ R6) GN=cca PE=3 SV=1
Length = 399
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 87/191 (45%), Gaps = 20/191 (10%)
Query: 8 DFDIITSAELKEVVRVFSQCEIVGKRFPICHVHFENTIVEVSSFSTSGRRFSRDFKYEFE 67
D DI TS+ +E ++F + +G V + EV++F T D ++
Sbjct: 45 DVDIATSSYPEETKQIFPRTADIGIEHGTVLVLDGDEEYEVTTFRTE------DVYVDYR 98
Query: 68 RPIGCDEKDFIR--WRNCLQRDFTINGLMFDPYAKIIYDYIGGIEDIRKAKVQTVIPAST 125
RP F+R + +RDFT+N D +I+ D G+ED+ K ++ V AS
Sbjct: 99 RPSAVS---FVRSLEEDLKRRDFTVNAFALDETGEIV-DLFHGLEDLEKQVLRAVGVASE 154
Query: 126 SFQEDCARILRAIRIAARLGFRFSRETAHFVKHLSPSILKLDRGRLLMEMNYMLAYGSAE 185
F ED RI+R R A LGF ET +K L+P + K+ R +E + +L
Sbjct: 155 RFNEDALRIMRGFRFQASLGFALEPETFKAMKTLTPLLEKISVERTFVEFDKLL------ 208
Query: 186 ASLRLLWKFGL 196
L W+ GL
Sbjct: 209 --LAPFWRRGL 217
>sp|Q97PP9|CCA_STRPN CCA-adding enzyme OS=Streptococcus pneumoniae serotype 4 (strain
ATCC BAA-334 / TIGR4) GN=cca PE=3 SV=2
Length = 399
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 87/191 (45%), Gaps = 20/191 (10%)
Query: 8 DFDIITSAELKEVVRVFSQCEIVGKRFPICHVHFENTIVEVSSFSTSGRRFSRDFKYEFE 67
D DI TS+ +E ++F + +G V + EV++F T D ++
Sbjct: 45 DVDIATSSYPEETKQIFPRTADIGIEHGTVLVLDGDEEYEVTTFRTE------DVYVDYR 98
Query: 68 RPIGCDEKDFIR--WRNCLQRDFTINGLMFDPYAKIIYDYIGGIEDIRKAKVQTVIPAST 125
RP F+R + +RDFT+N D +I+ D G+ED+ K ++ V AS
Sbjct: 99 RPSAVS---FVRSLEEDLKRRDFTVNAFALDETGEIV-DLFHGLEDLEKQVLRAVGVASE 154
Query: 126 SFQEDCARILRAIRIAARLGFRFSRETAHFVKHLSPSILKLDRGRLLMEMNYMLAYGSAE 185
F ED RI+R R A LGF ET +K L+P + K+ R +E + +L
Sbjct: 155 RFNEDALRIMRGFRFQASLGFALEPETFKAMKTLTPLLEKISVERTFVEFDKLL------ 208
Query: 186 ASLRLLWKFGL 196
L W+ GL
Sbjct: 209 --LAPFWRRGL 217
>sp|B2IR74|CCA_STRPS CCA-adding enzyme OS=Streptococcus pneumoniae (strain CGSP14)
GN=cca PE=3 SV=1
Length = 399
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 87/191 (45%), Gaps = 20/191 (10%)
Query: 8 DFDIITSAELKEVVRVFSQCEIVGKRFPICHVHFENTIVEVSSFSTSGRRFSRDFKYEFE 67
D DI TS+ +E ++F + +G V + EV++F T D ++
Sbjct: 45 DVDIATSSYPEETKQIFPRTADIGIEHGTVLVLDGDEEYEVTTFRTE------DVYVDYR 98
Query: 68 RPIGCDEKDFIR--WRNCLQRDFTINGLMFDPYAKIIYDYIGGIEDIRKAKVQTVIPAST 125
RP F+R + +RDFT+N D +I+ D G+ED+ K ++ V AS
Sbjct: 99 RPSAVS---FVRSLEEDLKRRDFTVNAFALDETGEIV-DLFHGLEDLEKQVLRAVGVASE 154
Query: 126 SFQEDCARILRAIRIAARLGFRFSRETAHFVKHLSPSILKLDRGRLLMEMNYMLAYGSAE 185
F ED RI+R R A LGF ET +K L+P + K+ R +E + +L
Sbjct: 155 RFNEDALRIMRGFRFQASLGFALEPETFKAMKTLTPLLEKISVERTFVEFDKLL------ 208
Query: 186 ASLRLLWKFGL 196
L W+ GL
Sbjct: 209 --LAPFWRRGL 217
>sp|Q5FKF0|CCA_LACAC CCA-adding enzyme OS=Lactobacillus acidophilus (strain ATCC 700396
/ NCK56 / N2 / NCFM) GN=cca PE=3 SV=1
Length = 399
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 82/160 (51%), Gaps = 14/160 (8%)
Query: 1 MLNRIPKDFDIITSAELKEVVRVFSQCEIVGKRFPICHVHFENTIVEVSSFST-SGRRFS 59
+L+R D DI TSA +EV +F + G + V +E E+++F T SG +
Sbjct: 39 LLDRHVHDIDITTSAYPEEVKELFEKSIDTGIKHGTVTVLYEGESYEITTFRTESGYQ-- 96
Query: 60 RDFKYEFERPIGCDEKDFIRW--RNCLQRDFTINGLMFDPYAKIIYDYIGGIEDIRKAKV 117
+F RP D F++ + +RDFTIN L D +II D G+ED++K +
Sbjct: 97 -----DFRRP---DHVTFVQNLDEDLKRRDFTINALAMDIRGQII-DLFNGVEDLKKRVI 147
Query: 118 QTVIPASTSFQEDCARILRAIRIAARLGFRFSRETAHFVK 157
+ V T F ED R++RA+R ++L F+ +T +K
Sbjct: 148 RAVGNPETRFHEDALRMMRAVRFMSQLEFKLEEKTERAIK 187
>sp|B8DC21|CCA_LISMH CCA-adding enzyme OS=Listeria monocytogenes serotype 4a (strain
HCC23) GN=cca PE=3 SV=1
Length = 393
Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 95/205 (46%), Gaps = 15/205 (7%)
Query: 1 MLNRIPKDFDIITSAELKEVVRVFSQCEIVGKRFPICHVHFENTIVEVSSFSTSGRRFSR 60
+LNR D DI TSA +EV +F G V N EV++F T G
Sbjct: 33 LLNRTISDVDIATSAFPEEVKEIFQTSYDTGIAHGTVTVRENNEFYEVTTFRTEG----- 87
Query: 61 DFKYE-FERPIGCDEKDFIR--WRNCLQRDFTINGLMFDPYAKIIYDYIGGIEDIRKAKV 117
YE F RP E FIR + +RDFT+N + D + ++D G I+ ++
Sbjct: 88 --TYEDFRRP---SEVTFIRSLEEDLKRRDFTMNAIAMDEHF-ALHDPFSGQLAIQNKEI 141
Query: 118 QTVIPASTSFQEDCARILRAIRIAARLGFRFSRETAHFVKHLSPSILKLDRGRLLMEMNY 177
+ V AS F ED R++RA+R ++L F +ET ++ + R+ +E
Sbjct: 142 KAVGKASERFHEDALRMMRAVRFLSQLDFELDKETEKALESQIELLQHTSVERMTVEWIK 201
Query: 178 MLAYGSAEASLRLLWKFGLLEVLLP 202
M+ +A+ ++ LL K +E LP
Sbjct: 202 MMKGKAAKRAIELLLKVK-METYLP 225
>sp|A3CMU4|CCA_STRSV CCA-adding enzyme OS=Streptococcus sanguinis (strain SK36) GN=cca
PE=3 SV=1
Length = 399
Score = 72.0 bits (175), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 12/208 (5%)
Query: 1 MLNRIPKDFDIITSAELKEVVRVFSQCEIVGKRFPICHVHFENTIVEVSSFSTSGRRFSR 60
+L R D DI +S+ +E R+F + VG V N EV++F T
Sbjct: 38 LLQRPIHDVDIASSSYPEETKRIFDRTVDVGIEHGTVLVLENNREYEVTTFRTE------ 91
Query: 61 DFKYEFERPIGCDEKDFIR--WRNCLQRDFTINGLMFDPYAKIIYDYIGGIEDIRKAKVQ 118
D ++ RP F+R + +RDFTIN L D ++I D G++D+ ++
Sbjct: 92 DVYVDYRRPSKVS---FVRSLEEDLKRRDFTINALALDENGQVI-DLFQGLDDLENQILR 147
Query: 119 TVIPASTSFQEDCARILRAIRIAARLGFRFSRETAHFVKHLSPSILKLDRGRLLMEMNYM 178
V A+ F ED RI+R R A L F ++T +K +P + K+ R+ +E + +
Sbjct: 148 AVGTAAERFNEDALRIMRGFRFQAALDFDLEQDTFAAMKDCAPLLEKISVERIFIEFDKL 207
Query: 179 LAYGSAEASLRLLWKFGLLEVLLPIQAA 206
L L L G +E L ++ +
Sbjct: 208 LLAPFWRKGLEALLTSGAIEFLPDLKGS 235
>sp|B5E6J9|CCA_STRP4 CCA-adding enzyme OS=Streptococcus pneumoniae serotype 19F (strain
G54) GN=cca PE=3 SV=1
Length = 399
Score = 71.6 bits (174), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 89/198 (44%), Gaps = 20/198 (10%)
Query: 1 MLNRIPKDFDIITSAELKEVVRVFSQCEIVGKRFPICHVHFENTIVEVSSFSTSGRRFSR 60
+L+ D DI TS+ +E ++F + +G V + EV++F T
Sbjct: 38 LLHNPIHDVDIATSSYPEETKQIFPRTADIGIEHGTVLVLDGDEEYEVTTFRTE------ 91
Query: 61 DFKYEFERPIGCDEKDFIR--WRNCLQRDFTINGLMFDPYAKIIYDYIGGIEDIRKAKVQ 118
D ++ RP F+R + +RDFT+N D +I+ D G+ED+ K ++
Sbjct: 92 DVYVDYRRPSAVS---FVRSLEEDLKRRDFTVNAFALDETGEIV-DLFHGLEDLEKQVLR 147
Query: 119 TVIPASTSFQEDCARILRAIRIAARLGFRFSRETAHFVKHLSPSILKLDRGRLLMEMNYM 178
V AS F ED RI+R R A LGF ET +K L+P + + R +E + +
Sbjct: 148 AVGVASERFNEDALRIMRGFRFQASLGFALEPETFKAMKTLTPLLENISVERTFVEFDKL 207
Query: 179 LAYGSAEASLRLLWKFGL 196
L L W+ GL
Sbjct: 208 L--------LAPFWRRGL 217
>sp|Q74JK7|CCA_LACJO CCA-adding enzyme OS=Lactobacillus johnsonii (strain CNCM I-12250 /
La1 / NCC 533) GN=cca PE=3 SV=1
Length = 398
Score = 71.2 bits (173), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 93/201 (46%), Gaps = 14/201 (6%)
Query: 1 MLNRIPKDFDIITSAELKEVVRVFSQCEIVGKRFPICHVHFENTIVEVSSFST-SGRRFS 59
+LNR D DI TSA E+ ++F + G + V +E E+++F T SG +
Sbjct: 38 LLNRHIHDVDIATSAYPMEIKQIFKKTIDTGIKHGTVTVLYEGESYEITTFRTESGYQ-- 95
Query: 60 RDFKYEFERPIGCDEKDFIR--WRNCLQRDFTINGLMFDPYAKIIYDYIGGIEDIRKAKV 117
+F RP D F++ + +RDFTIN L D II D+ G+ D+ K +
Sbjct: 96 -----DFRRP---DHVTFVQNLSEDLKRRDFTINALAMDVDGNII-DHFDGLGDLEKHLI 146
Query: 118 QTVIPASTSFQEDCARILRAIRIAARLGFRFSRETAHFVKHLSPSILKLDRGRLLMEMNY 177
+ V A F ED R++RA+R ++L F ET + + K+ R+ E
Sbjct: 147 RAVGKAENRFHEDALRMMRAVRFMSQLQFTLEPETEQAISDNHELLSKISVERIRDEFVK 206
Query: 178 MLAYGSAEASLRLLWKFGLLE 198
M ++ + ++ GL E
Sbjct: 207 MGIAPGSQKAFQIFLDTGLSE 227
>sp|C1KWK5|CCA_LISMC CCA-adding enzyme OS=Listeria monocytogenes serotype 4b (strain
CLIP80459) GN=cca PE=3 SV=1
Length = 393
Score = 70.9 bits (172), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 94/205 (45%), Gaps = 15/205 (7%)
Query: 1 MLNRIPKDFDIITSAELKEVVRVFSQCEIVGKRFPICHVHFENTIVEVSSFSTSGRRFSR 60
+LNR D DI TSA +EV +F G V N EV++F T G
Sbjct: 33 LLNRTISDVDIATSAFPEEVKEIFQTSYDTGIAHGTVTVRENNEFYEVTTFRTEG----- 87
Query: 61 DFKYE-FERPIGCDEKDFIR--WRNCLQRDFTINGLMFDPYAKIIYDYIGGIEDIRKAKV 117
YE F RP E FIR + +RDFT+N + D + + D G I+ ++
Sbjct: 88 --TYEDFRRP---SEVTFIRSLEEDLKRRDFTMNAIAMDEHF-ALQDPFSGQLAIQNKEI 141
Query: 118 QTVIPASTSFQEDCARILRAIRIAARLGFRFSRETAHFVKHLSPSILKLDRGRLLMEMNY 177
+ V AS F ED R++RA+R ++L F +ET ++ + R+ +E
Sbjct: 142 KAVGKASERFHEDALRMMRAVRFLSQLDFELDKETEKALESQIELLQHTSVERITVEWLK 201
Query: 178 MLAYGSAEASLRLLWKFGLLEVLLP 202
M+ +A+ ++ LL K +E LP
Sbjct: 202 MMKGKAAKRAIELLLKVK-METYLP 225
>sp|Q71YB0|CCA_LISMF CCA-adding enzyme OS=Listeria monocytogenes serotype 4b (strain
F2365) GN=cca PE=3 SV=1
Length = 393
Score = 70.9 bits (172), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 94/205 (45%), Gaps = 15/205 (7%)
Query: 1 MLNRIPKDFDIITSAELKEVVRVFSQCEIVGKRFPICHVHFENTIVEVSSFSTSGRRFSR 60
+LNR D DI TSA +EV +F G V N EV++F T G
Sbjct: 33 LLNRTISDVDIATSAFPEEVKEIFQTSYDTGIAHGTVTVRENNEFYEVTTFRTEGT---- 88
Query: 61 DFKYE-FERPIGCDEKDFIR--WRNCLQRDFTINGLMFDPYAKIIYDYIGGIEDIRKAKV 117
YE F RP E FIR + +RDFT+N + D + + D G I+ ++
Sbjct: 89 ---YEDFRRP---SEVTFIRSLEEDLKRRDFTMNAIAMDEHF-ALQDPFSGQLAIQNKEI 141
Query: 118 QTVIPASTSFQEDCARILRAIRIAARLGFRFSRETAHFVKHLSPSILKLDRGRLLMEMNY 177
+ V AS F ED R++RA+R ++L F +ET ++ + R+ +E
Sbjct: 142 KAVGKASERFHEDALRMMRAVRFLSQLDFELDKETEKALESQIELLQHTSVERITVEWLK 201
Query: 178 MLAYGSAEASLRLLWKFGLLEVLLP 202
M+ +A+ ++ LL K +E LP
Sbjct: 202 MMKGKAAKRAIELLLKVK-METYLP 225
>sp|B1MYC1|CCA_LEUCK CCA-adding enzyme OS=Leuconostoc citreum (strain KM20) GN=cca PE=3
SV=1
Length = 403
Score = 70.9 bits (172), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 94/202 (46%), Gaps = 12/202 (5%)
Query: 1 MLNRIPKDFDIITSAELKEVVRVFSQCEIVGKRFPICHVHFENTIVEVSSFSTSGR--RF 58
+LN+ D DI TSA +E+ +F++ G + V E+++F T F
Sbjct: 38 LLNKPIHDVDIATSAFPEEIKALFTKTVDTGIQHGTVMVLDHGDGYEITTFRTESTYTDF 97
Query: 59 SRDFKYEFERPIGCDEKDFIRWRNCLQRDFTINGLMFDPYAKIIYDYIGGIEDIRKAKVQ 118
R K F R + D K +RDFTIN + II D G+ D+ + +++
Sbjct: 98 RRPDKVTFVRSLAEDLK---------RRDFTINAIAMTKDGDII-DLFDGLTDMAQKRIR 147
Query: 119 TVIPASTSFQEDCARILRAIRIAARLGFRFSRETAHFVKHLSPSILKLDRGRLLMEMNYM 178
V A F ED RI+RA+R +A+LGF + T +K + ++ K+ R+ +E +
Sbjct: 148 AVGDAEVRFNEDALRIMRALRFSAQLGFDIAPHTKAALKQIGRNLEKIAVERIRVEFEKL 207
Query: 179 LAYGSAEASLRLLWKFGLLEVL 200
L A SL + + L+ L
Sbjct: 208 LMGQYASNSLSVAIEADLIRYL 229
>sp|A7GN74|CCA_BACCN CCA-adding enzyme OS=Bacillus cereus subsp. cytotoxis (strain NVH
391-98) GN=cca PE=3 SV=1
Length = 397
Score = 70.9 bits (172), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 90/181 (49%), Gaps = 19/181 (10%)
Query: 1 MLNRIPKDFDIITSAELKEVVRVFSQCEIVGKRFPICHVHFENTIVEVSSFSTSG--RRF 58
+++R D DI TSA +EV+++F + VG V + EV++F T F
Sbjct: 32 IIDRPIGDIDIATSALPEEVMKLFPKHVPVGLEHGTVIVLQDGEPYEVTTFRTESDYEDF 91
Query: 59 SRDFKYEFERPIGCDEKDFIRWRNCLQRDFTINGLMFDPYAKIIYDYIGGIEDIRKAKVQ 118
R +F R + E+D R RDFT+N + + +II D GG E I+K ++
Sbjct: 92 RRPSSVQFVRSL---EEDLKR------RDFTMNAIAMNEDGEII-DLFGGQEAIQKREIV 141
Query: 119 TVIPASTSFQEDCARILRAIRIAARLGFRFSRET-------AHFVKHLSPSILKLDRGRL 171
TV A+ FQED R++R IR + LGF +T H ++H++ + ++ +L
Sbjct: 142 TVGNAAERFQEDALRMMRGIRFVSTLGFSLEEKTECAIKRYGHLLEHIAIERITVEFEKL 201
Query: 172 L 172
L
Sbjct: 202 L 202
>sp|Q8Y5Z8|CCA_LISMO CCA-adding enzyme OS=Listeria monocytogenes serovar 1/2a (strain
ATCC BAA-679 / EGD-e) GN=cca PE=3 SV=1
Length = 393
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 73/154 (47%), Gaps = 12/154 (7%)
Query: 1 MLNRIPKDFDIITSAELKEVVRVFSQCEIVGKRFPICHVHFENTIVEVSSFSTSG--RRF 58
+LNR D DI TSA +EV +F G V N EV++F T G F
Sbjct: 33 LLNRTISDVDIATSAFPEEVKEIFQSTYDTGIAHGTVTVRENNEFYEVTTFRTEGTYEDF 92
Query: 59 SRDFKYEFERPIGCDEKDFIRWRNCLQRDFTINGLMFDPYAKIIYDYIGGIEDIRKAKVQ 118
R + +F R + E+D R RDFT+N + D + ++D G E I+ ++
Sbjct: 93 RRPSEVKFIRSL---EEDLQR------RDFTMNAIAMDEHF-ALHDPFSGQEAIKNKAIK 142
Query: 119 TVIPASTSFQEDCARILRAIRIAARLGFRFSRET 152
V AS F ED R++R +R ++L F+ ET
Sbjct: 143 AVGKASERFHEDALRMMRGVRFLSQLDFQLDSET 176
>sp|B9DNX1|CCA_STACT CCA-adding enzyme OS=Staphylococcus carnosus (strain TM300) GN=cca
PE=3 SV=1
Length = 400
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 87/193 (45%), Gaps = 12/193 (6%)
Query: 1 MLNRIPKDFDIITSAELKEVVRVFSQCEIVGKRFPICHVHFENTIVEVSSFSTSGRRFSR 60
+++R D DI TSA E+ +F+ +GK +V + + EV++F G
Sbjct: 34 LMDRPIHDIDITTSASPDEIEGIFTNTIPIGKEHGTINVVYNHENYEVTTFRAEG----- 88
Query: 61 DFKYEFERPIGCDEKDFIR--WRNCLQRDFTINGLMFDPYAKIIYDYIGGIEDIRKAKVQ 118
E+E E F+R +++ +RDFTIN + D I DY G DI+ ++
Sbjct: 89 ----EYEDHRRPSEVIFVRDLYKDVERRDFTINAIAMDNQFNI-KDYFNGYSDIQNKLIK 143
Query: 119 TVIPASTSFQEDCARILRAIRIAARLGFRFSRETAHFVKHLSPSILKLDRGRLLMEMNYM 178
TV F ED RILR +R ++L F +T ++ L R+++E+ +
Sbjct: 144 TVGNPYERFNEDALRILRGLRFKSQLRFEIDSDTYKAMQEKIADTEYLSIERIIIELRKL 203
Query: 179 LAYGSAEASLRLL 191
L A LL
Sbjct: 204 LEGTDASIVYPLL 216
>sp|Q49XR3|CCA_STAS1 CCA-adding enzyme OS=Staphylococcus saprophyticus subsp.
saprophyticus (strain ATCC 15305 / DSM 20229) GN=cca
PE=3 SV=1
Length = 399
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 78/154 (50%), Gaps = 12/154 (7%)
Query: 1 MLNRIPKDFDIITSAELKEVVRVFSQCEIVGKRFPICHVHFENTIVEVSSFSTSGRRFSR 60
++NR D DI TSA E+ VF + +G+ +V ++ EV++F + G
Sbjct: 34 LMNRPIHDIDITTSATPDEIETVFDKTIPIGREHGTINVIYKGEQYEVTTFRSEG----- 88
Query: 61 DFKYEFERPIGCDEKDFIR--WRNCLQRDFTINGLMFDPYAKIIYDYIGGIEDIRKAKVQ 118
D+ + RP +E F+R + + +RDFT+N + D +I +DY G +DI+ ++
Sbjct: 89 DYD-DHRRP---NEVFFVRNLYDDVQRRDFTMNAIAMDINYQI-FDYFEGQQDIKHQLIR 143
Query: 119 TVIPASTSFQEDCARILRAIRIAARLGFRFSRET 152
TV F ED RI+R +R ++ GF T
Sbjct: 144 TVGNPDERFDEDALRIIRGLRFQSQFGFHLEEAT 177
>sp|Q92AA3|CCA_LISIN CCA-adding enzyme OS=Listeria innocua serovar 6a (strain CLIP
11262) GN=cca PE=3 SV=1
Length = 393
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 95/205 (46%), Gaps = 15/205 (7%)
Query: 1 MLNRIPKDFDIITSAELKEVVRVFSQCEIVGKRFPICHVHFENTIVEVSSFSTSGRRFSR 60
+LNR D DI TSA +EV +F G V EV++F T G
Sbjct: 33 LLNRPISDVDIATSAFPEEVKEIFQSTYDTGIAHGTVTVRENKECYEVTTFRTEG----- 87
Query: 61 DFKYE-FERPIGCDEKDFIR--WRNCLQRDFTINGLMFDPYAKIIYDYIGGIEDIRKAKV 117
YE F RP E FIR + L+RDFT+N + D K+ +D G I+ ++
Sbjct: 88 --TYEDFRRP---SEVTFIRSLEEDLLRRDFTMNAIAMDENFKL-HDPFSGQLAIQNKEI 141
Query: 118 QTVIPASTSFQEDCARILRAIRIAARLGFRFSRETAHFVKHLSPSILKLDRGRLLMEMNY 177
+ V AS F ED R++RA+R ++L F+ +ET + + + R+ +E
Sbjct: 142 KAVGKASERFHEDALRMMRAVRFLSQLDFQLDKETETALTNQIALLQHTSVERITVEWIK 201
Query: 178 MLAYGSAEASLRLLWKFGLLEVLLP 202
M+ + + ++ LL K +E LP
Sbjct: 202 MIKGQAVKRAIDLLLKVE-METYLP 225
>sp|A8YV39|CCA_LACH4 CCA-adding enzyme OS=Lactobacillus helveticus (strain DPC 4571)
GN=cca PE=3 SV=1
Length = 399
Score = 68.6 bits (166), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 80/160 (50%), Gaps = 14/160 (8%)
Query: 1 MLNRIPKDFDIITSAELKEVVRVFSQCEIVGKRFPICHVHFENTIVEVSSFST-SGRRFS 59
+L+R D DI TSA +EV +F++ G R V + E+++F T SG +
Sbjct: 39 LLDRHVHDVDITTSAYPEEVKELFAKSIDTGIRHGTVTVLYGGESYEITTFRTESGYQ-- 96
Query: 60 RDFKYEFERPIGCDEKDFIRW--RNCLQRDFTINGLMFDPYAKIIYDYIGGIEDIRKAKV 117
++ RP D F++ + +RDFTIN L D + +I+ D G+ED++ +
Sbjct: 97 -----DYRRP---DHVTFVQNLDEDLKRRDFTINALAMDLHGQIV-DLFNGVEDLKNHII 147
Query: 118 QTVIPASTSFQEDCARILRAIRIAARLGFRFSRETAHFVK 157
+ V F ED R++RA+R ++L F +T +K
Sbjct: 148 RAVGDPEKRFHEDALRMMRAVRFTSQLKFNLEEKTEQAIK 187
>sp|A8AX96|CCA_STRGC CCA-adding enzyme OS=Streptococcus gordonii (strain Challis / ATCC
35105 / CH1 / DL1 / V288) GN=cca PE=3 SV=1
Length = 399
Score = 68.6 bits (166), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 12/208 (5%)
Query: 1 MLNRIPKDFDIITSAELKEVVRVFSQCEIVGKRFPICHVHFENTIVEVSSFSTSGRRFSR 60
+L R D DI +S+ +E R+F + VG V N EV++F T
Sbjct: 38 LLQRPIHDVDIASSSYPEETKRIFDRTVDVGIEHGTVLVLENNREYEVTTFRTE------ 91
Query: 61 DFKYEFERPIGCDEKDFIR--WRNCLQRDFTINGLMFDPYAKIIYDYIGGIEDIRKAKVQ 118
D ++ RP F+R + +RDFTIN L D ++I D G++D+ ++
Sbjct: 92 DVYVDYRRPSKVS---FVRSLEEDLKRRDFTINALALDENGQLI-DLFQGLDDLENRILR 147
Query: 119 TVIPASTSFQEDCARILRAIRIAARLGFRFSRETAHFVKHLSPSILKLDRGRLLMEMNYM 178
V + F ED RI+R R A L F ++T + +P + K+ R+ +E + +
Sbjct: 148 AVGTPAERFNEDALRIMRGFRFQATLNFDLEQDTLSAMTDCAPLLEKISVERIFIEFDKL 207
Query: 179 LAYGSAEASLRLLWKFGLLEVLLPIQAA 206
L L L G +E L ++ +
Sbjct: 208 LLAPFWRKGLEALLTSGAIEFLPDLKGS 235
>sp|Q9CP21|CCA_PASMU Multifunctional CCA protein OS=Pasteurella multocida (strain Pm70)
GN=cca PE=3 SV=1
Length = 420
Score = 68.2 bits (165), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 99/213 (46%), Gaps = 21/213 (9%)
Query: 1 MLNRIPKDFDIITSAELKEVVRVFSQC-EIVGKRFPI-CHVHFENTIVEVSSFSTSGRRF 58
+LN + KD D + + + SQ + VGK FP+ H + + +G +
Sbjct: 14 LLNLVVKDRDWVVVGATPD--DLLSQGYQQVGKDFPVFLHPQTKEEYALARTERKAGSGY 71
Query: 59 SRDFKYEFERPIGCDEKDFIRWRNCLQRDFTINGLMFDPYAKIIYDYIGGIEDIRKAKVQ 118
+ F +F I E+D R RD TIN L D KI YD+ GG+ D+++ ++
Sbjct: 72 T-GFICDFSPTISL-EQDLSR------RDLTINALAQDLDGKI-YDFYGGLTDLKQRLLR 122
Query: 119 TVIPASTSFQEDCARILRAIRIAAR---LGFRFSRETAHFVKHLSPS--ILKLDRGRLLM 173
V PA F ED R+LR R AAR LGF + ET ++ LS S + L R+ +
Sbjct: 123 HVSPA---FAEDPLRVLRVARFAARYHALGFTIASETRELMQQLSQSGELSNLTAERVWL 179
Query: 174 EMNYMLAYGSAEASLRLLWKFGLLEVLLPIQAA 206
E L E + L + G L+VL P AA
Sbjct: 180 ETEKALLEPHPEVYFQTLQEVGALQVLFPELAA 212
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.330 0.144 0.433
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,667,876
Number of Sequences: 539616
Number of extensions: 3519572
Number of successful extensions: 9180
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 133
Number of HSP's successfully gapped in prelim test: 191
Number of HSP's that attempted gapping in prelim test: 8754
Number of HSP's gapped (non-prelim): 325
length of query: 268
length of database: 191,569,459
effective HSP length: 115
effective length of query: 153
effective length of database: 129,513,619
effective search space: 19815583707
effective search space used: 19815583707
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 60 (27.7 bits)