BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024385
(268 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q54XX1|SRPRB_DICDI Signal recognition particle receptor subunit beta OS=Dictyostelium
discoideum GN=srprb PE=3 SV=1
Length = 290
Score = 117 bits (294), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 113/211 (53%), Gaps = 16/211 (7%)
Query: 62 KKSTTIVLAGLSGSGKTVLFYQLRDGSTHQGTVTSMEPNEDTFVLHSESTKKGKIKPVHL 121
K+ I + GLS +GKT L L + T TS+ N ++ +E+ KK + +
Sbjct: 83 KRGVNIAILGLSNAGKTALLLNLTNVDKKISTHTSITTNNGVYI--TENKKK-----LPI 135
Query: 122 VDVPGHSRLRPKLDEFLPQAAGIVFVVDALEFLPNCSAASEYLYDILTNSTVVKKKIPVL 181
+DVPG+ + + L + L +A I++V+D F+ N + ++YLYDILTN +V +KKIPVL
Sbjct: 136 IDVPGNGKAKASLPKILSNSACIIYVIDGTTFIDNSTQEAQYLYDILTNESVYQKKIPVL 195
Query: 182 ICCNKTDKVTAHTKEFIRKQMEKEIDKLRASRSA----VSEADVTNDFTLGIPGQAFSFS 237
+ NK D + E ++ +E+E+D LR +R A + + + D LGI G F F
Sbjct: 196 VFNNKMDLDSTIDTEQVKNILERELDDLRRTRGATPIVLGQEEDKKDIYLGIEGTPFQFD 255
Query: 238 QCHNKV-----SVAEASGLTGEISQVEQFIR 263
N V S + ++G EI ++ FI+
Sbjct: 256 HLPNDVQFSNGSASPSNGELKEIDDIKNFIQ 286
>sp|P47758|SRPRB_MOUSE Signal recognition particle receptor subunit beta OS=Mus musculus
GN=Srprb PE=1 SV=1
Length = 269
Score = 107 bits (268), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 108/202 (53%), Gaps = 11/202 (5%)
Query: 58 VFRRKKSTTIVL-AGLSGSGKTVLFYQLRDGSTHQGTVTSMEPNEDTFVLHSESTKKGKI 116
++ RK S VL GL SGKT+LF +L G ++ T TS+ D+ ++ + +G
Sbjct: 55 IWSRKSSQRAVLFVGLCDSGKTLLFVRLLTGQ-YRDTQTSIT---DSSAIYKVNNNRGN- 109
Query: 117 KPVHLVDVPGHSRLRPKL-DEFLPQAAGIVFVVDALEFLPNCSAASEYLYDILTNSTVVK 175
+ L+D+PGH LR +L D F A +VFVVD+ F +E+LY +L +S +K
Sbjct: 110 -SLTLIDLPGHESLRFQLLDRFKSSARAVVFVVDSAAFQREVKDVAEFLYQVLIDSMALK 168
Query: 176 KKIPVLICCNKTDKVTAHTKEFIRKQMEKEIDKLRASRSAVS---EADVTNDFTLGIPGQ 232
+LI CNK D A + + I++Q+EKE++ LR +RSA ++ T LG G+
Sbjct: 169 NSPSLLIACNKQDIAMAKSAKLIQQQLEKELNTLRVTRSAAPSTLDSSSTAPAQLGKKGK 228
Query: 233 AFSFSQCHNKVSVAEASGLTGE 254
F FSQ KV E S G
Sbjct: 229 EFEFSQLPLKVEFLECSAKGGR 250
>sp|Q9Y5M8|SRPRB_HUMAN Signal recognition particle receptor subunit beta OS=Homo sapiens
GN=SRPRB PE=1 SV=3
Length = 271
Score = 106 bits (264), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 105/199 (52%), Gaps = 10/199 (5%)
Query: 60 RRKKSTTIVLAGLSGSGKTVLFYQLRDGSTHQGTVTSMEPNEDTFVLHSESTKKGKIKPV 119
RR ++L GL SGKT+LF +L G ++ T TS+ D+ ++ + +G +
Sbjct: 60 RRSSQRAVLLVGLCDSGKTLLFVRLLTG-LYRDTQTSIT---DSCAVYRVNNNRGN--SL 113
Query: 120 HLVDVPGHSRLRPK-LDEFLPQAAGIVFVVDALEFLPNCSAASEYLYDILTNSTVVKKKI 178
L+D+PGH LR + L+ F A IVFVVD+ F +E+LY +L +S +K
Sbjct: 114 TLIDLPGHESLRLQFLERFKSSARAIVFVVDSAAFQREVKDVAEFLYQVLIDSMGLKNTP 173
Query: 179 PVLICCNKTDKVTAHTKEFIRKQMEKEIDKLRASRSAVS---EADVTNDFTLGIPGQAFS 235
LI CNK D A + + I++Q+EKE++ LR +RSA ++ T LG G+ F
Sbjct: 174 SFLIACNKQDIAMAKSAKLIQQQLEKELNTLRVTRSAAPSTLDSSSTAPAQLGKKGKEFE 233
Query: 236 FSQCHNKVSVAEASGLTGE 254
FSQ KV E S G
Sbjct: 234 FSQLPLKVEFLECSAKGGR 252
>sp|Q4FZX7|SRPRB_RAT Signal recognition particle receptor subunit beta OS=Rattus
norvegicus GN=Srprb PE=2 SV=1
Length = 269
Score = 106 bits (264), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 107/202 (52%), Gaps = 11/202 (5%)
Query: 58 VFRRKKSTTIVL-AGLSGSGKTVLFYQLRDGSTHQGTVTSMEPNEDTFVLHSESTKKGKI 116
++ RK S VL GL SGKT+LF +L G ++ T TS+ D+ ++ + +G
Sbjct: 55 IWSRKSSQRAVLFVGLCDSGKTLLFVRLLTGQ-YRDTQTSIT---DSSAIYKVNNNRGN- 109
Query: 117 KPVHLVDVPGHSRLRPK-LDEFLPQAAGIVFVVDALEFLPNCSAASEYLYDILTNSTVVK 175
+ L+D+PGH LR + LD F A +VFVVD+ F +E+LY +L +S +K
Sbjct: 110 -SLTLIDLPGHESLRLQFLDRFKSSARAVVFVVDSATFQREVKDVAEFLYQVLIDSMALK 168
Query: 176 KKIPVLICCNKTDKVTAHTKEFIRKQMEKEIDKLRASRSAVS---EADVTNDFTLGIPGQ 232
L+ CNK D A + + I++Q+EKE++ LR +RSA ++ T LG G+
Sbjct: 169 NTPAFLVACNKQDIAMAKSAKLIQQQLEKELNTLRVTRSAAPSTLDSSSTAPAQLGKKGK 228
Query: 233 AFSFSQCHNKVSVAEASGLTGE 254
F FSQ KV E S G
Sbjct: 229 EFEFSQLPLKVEFLECSAKGGR 250
>sp|P36057|SRPB_YEAST Signal recognition particle receptor subunit beta OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=SRP102 PE=1
SV=1
Length = 244
Score = 72.0 bits (175), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 116/250 (46%), Gaps = 33/250 (13%)
Query: 39 LYIACAVLLLTTALLLLLQ-------VFRRKKSTTIVLAGLSGSGKTVLFYQLRDGSTHQ 91
L IAC +++ TT L+ +Q + ++ +I++AG SGKT L L S
Sbjct: 6 LIIACLLVIGTTIALIAVQKASSKTGIKQKSYQPSIIIAGPQNSGKTSLLTLLTTDSVRP 65
Query: 92 GTVTSMEPNEDTFVLHSESTKKGKIKPVHLVDVPGHSRLRPKLDEFLPQAA----GIVFV 147
TV S EP S + G V LVD PGH +LR KL ++L A G++F+
Sbjct: 66 -TVVSQEP-------LSAADYDGS--GVTLVDFPGHVKLRYKLSDYLKTRAKFVKGLIFM 115
Query: 148 VDALEFLPNCSAASEYLYDILT-NSTVVKKKIPVLICCNKTDKVTAHTKEFIRKQMEKEI 206
VD+ + +E+L DIL+ + + I +LI CNK++ TA I+ +E EI
Sbjct: 116 VDSTVDPKKLTTTAEFLVDILSITESSCENGIDILIACNKSELFTARPPSKIKDALESEI 175
Query: 207 DKLRASRS--------AVSEADVTNDFTLGI--PGQAFSFSQCHNKVSVAEASGLTGEIS 256
K+ R ++E D + TL + F F+ V E S +IS
Sbjct: 176 QKVIERRKKSLNEVERKINEEDYAEN-TLDVLQSTDGFKFANLEASVVAFEGSINKRKIS 234
Query: 257 QVEQFIREQV 266
Q ++I E++
Sbjct: 235 QWREWIDEKL 244
>sp|Q52NJ3|SAR1A_PIG GTP-binding protein SAR1a OS=Sus scrofa GN=SAR1A PE=2 SV=1
Length = 198
Score = 57.8 bits (138), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 66/139 (47%), Gaps = 12/139 (8%)
Query: 62 KKSTTIVLAGLSGSGKTVLFYQLRDGSTHQGTVTSMEPNEDTFVLHSESTKKGKIKPVHL 121
KKS +V GL +GKT L + L+D Q V ++ P + + +
Sbjct: 23 KKSGKLVFLGLDNAGKTTLLHMLKDDRLGQ-HVPTLHPTSEELTIAGMTFTT-------- 73
Query: 122 VDVPGHSRLRPKLDEFLPQAAGIVFVVDALEFLPNCSAASEYLYDILTNSTVVKKKIPVL 181
D+ GH + R +LP GIVF+VD + P + L ++T+ T+ +P+L
Sbjct: 74 FDLGGHEQARRVWKNYLPAINGIVFLVDCADH-PRLMESKVELNALMTDETI--SNVPIL 130
Query: 182 ICCNKTDKVTAHTKEFIRK 200
I NK D+ A ++E +R+
Sbjct: 131 ILGNKIDRTDAISEEKLRE 149
>sp|Q3T0D7|SAR1A_BOVIN GTP-binding protein SAR1a OS=Bos taurus GN=SAR1A PE=2 SV=1
Length = 198
Score = 57.8 bits (138), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 66/139 (47%), Gaps = 12/139 (8%)
Query: 62 KKSTTIVLAGLSGSGKTVLFYQLRDGSTHQGTVTSMEPNEDTFVLHSESTKKGKIKPVHL 121
KKS +V GL +GKT L + L+D Q V ++ P + + +
Sbjct: 23 KKSGKLVFLGLDNAGKTTLLHMLKDDRLGQ-HVPTLHPTSEELTIAGMTFTT-------- 73
Query: 122 VDVPGHSRLRPKLDEFLPQAAGIVFVVDALEFLPNCSAASEYLYDILTNSTVVKKKIPVL 181
D+ GH + R +LP GIVF+VD + P + L ++T+ T+ +P+L
Sbjct: 74 FDLGGHEQARRVWKNYLPAINGIVFLVDCADH-PRLMESKVELNALMTDETI--SNVPIL 130
Query: 182 ICCNKTDKVTAHTKEFIRK 200
I NK D+ A ++E +R+
Sbjct: 131 ILGNKIDRTDAISEEKLRE 149
>sp|Q9CQC9|SAR1B_MOUSE GTP-binding protein SAR1b OS=Mus musculus GN=Sar1b PE=1 SV=1
Length = 198
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 66/139 (47%), Gaps = 12/139 (8%)
Query: 62 KKSTTIVLAGLSGSGKTVLFYQLRDGSTHQGTVTSMEPNEDTFVLHSESTKKGKIKPVHL 121
KKS +V GL +GKT L + L+D Q V ++ P + + +
Sbjct: 23 KKSGKLVFLGLDNAGKTTLLHMLKDDRLGQ-HVPTLHPTSEELTIAGMTFTT-------- 73
Query: 122 VDVPGHSRLRPKLDEFLPQAAGIVFVVDALEFLPNCSAASEYLYDILTNSTVVKKKIPVL 181
D+ GH + R +LP GIVF+VD + + E L ++T+ T+ +P+L
Sbjct: 74 FDLGGHVQARRVWKNYLPAINGIVFLVDCADH-ERLLESKEELDSLMTDETIA--NVPIL 130
Query: 182 ICCNKTDKVTAHTKEFIRK 200
I NK D+ A ++E +R+
Sbjct: 131 ILGNKIDRPEAISEERLRE 149
>sp|Q5R548|SAR1A_PONAB GTP-binding protein SAR1a OS=Pongo abelii GN=SAR1A PE=2 SV=1
Length = 198
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 66/139 (47%), Gaps = 12/139 (8%)
Query: 62 KKSTTIVLAGLSGSGKTVLFYQLRDGSTHQGTVTSMEPNEDTFVLHSESTKKGKIKPVHL 121
KKS +V GL +GKT L + L+D Q V ++ P + + +
Sbjct: 23 KKSGKLVFLGLDNAGKTTLLHMLKDDRLGQ-HVPTLHPTSEELTIAGMTFTT-------- 73
Query: 122 VDVPGHSRLRPKLDEFLPQAAGIVFVVDALEFLPNCSAASEYLYDILTNSTVVKKKIPVL 181
D+ GH + R +LP GIVF+VD + + E L ++T+ T+ +P+L
Sbjct: 74 FDLGGHEQARRVWKNYLPAINGIVFLVDCADHSRLVESKVE-LNALMTDETI--SNVPIL 130
Query: 182 ICCNKTDKVTAHTKEFIRK 200
I NK D+ A ++E +R+
Sbjct: 131 ILGNKIDRTDAISEEKLRE 149
>sp|Q9NR31|SAR1A_HUMAN GTP-binding protein SAR1a OS=Homo sapiens GN=SAR1A PE=1 SV=1
Length = 198
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 66/139 (47%), Gaps = 12/139 (8%)
Query: 62 KKSTTIVLAGLSGSGKTVLFYQLRDGSTHQGTVTSMEPNEDTFVLHSESTKKGKIKPVHL 121
KKS +V GL +GKT L + L+D Q V ++ P + + +
Sbjct: 23 KKSGKLVFLGLDNAGKTTLLHMLKDDRLGQ-HVPTLHPTSEELTIAGMTFTT-------- 73
Query: 122 VDVPGHSRLRPKLDEFLPQAAGIVFVVDALEFLPNCSAASEYLYDILTNSTVVKKKIPVL 181
D+ GH + R +LP GIVF+VD + + E L ++T+ T+ +P+L
Sbjct: 74 FDLGGHEQARRVWKNYLPAINGIVFLVDCADHSRLVESKVE-LNALMTDETI--SNVPIL 130
Query: 182 ICCNKTDKVTAHTKEFIRK 200
I NK D+ A ++E +R+
Sbjct: 131 ILGNKIDRTDAISEEKLRE 149
>sp|Q5PYH3|SAR1B_PIG GTP-binding protein SAR1b OS=Sus scrofa GN=SAR1B PE=2 SV=1
Length = 198
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 66/139 (47%), Gaps = 12/139 (8%)
Query: 62 KKSTTIVLAGLSGSGKTVLFYQLRDGSTHQGTVTSMEPNEDTFVLHSESTKKGKIKPVHL 121
KK+ +V GL +GKT L + L+D Q V ++ P + + +
Sbjct: 23 KKTGKLVFLGLDNAGKTTLLHMLKDDRLGQ-HVPTLHPTSEELTIAGMTFTT-------- 73
Query: 122 VDVPGHSRLRPKLDEFLPQAAGIVFVVDALEFLPNCSAASEYLYDILTNSTVVKKKIPVL 181
D+ GH + R +LP GIVF+VD + + E L ++T+ TV +P+L
Sbjct: 74 FDLGGHVQARRVWKNYLPAINGIVFLVDCADH-ERLLESKEELDSLMTDETVA--NVPIL 130
Query: 182 ICCNKTDKVTAHTKEFIRK 200
I NK D+ A ++E +R+
Sbjct: 131 ILGNKIDRPEAISEERLRE 149
>sp|Q3T0T7|SAR1B_BOVIN GTP-binding protein SAR1b OS=Bos taurus GN=SAR1B PE=2 SV=1
Length = 198
Score = 55.1 bits (131), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 66/139 (47%), Gaps = 12/139 (8%)
Query: 62 KKSTTIVLAGLSGSGKTVLFYQLRDGSTHQGTVTSMEPNEDTFVLHSESTKKGKIKPVHL 121
KK+ +V GL +GKT L + L+D Q V ++ P + + +
Sbjct: 23 KKTGKLVFLGLDNAGKTTLLHMLKDDRLGQ-HVPTLHPTSEELTIAGMTFTT-------- 73
Query: 122 VDVPGHSRLRPKLDEFLPQAAGIVFVVDALEFLPNCSAASEYLYDILTNSTVVKKKIPVL 181
D+ GH + R +LP GIVF+VD + + E L ++T+ TV +P+L
Sbjct: 74 FDLGGHVQARRVWKNYLPAINGIVFLVDCADH-ERLLESKEELDSLMTDETVA--NVPIL 130
Query: 182 ICCNKTDKVTAHTKEFIRK 200
I NK D+ A ++E +R+
Sbjct: 131 ILGNKIDRPEAISEERLRE 149
>sp|Q9Y6B6|SAR1B_HUMAN GTP-binding protein SAR1b OS=Homo sapiens GN=SAR1B PE=1 SV=1
Length = 198
Score = 55.1 bits (131), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 66/139 (47%), Gaps = 12/139 (8%)
Query: 62 KKSTTIVLAGLSGSGKTVLFYQLRDGSTHQGTVTSMEPNEDTFVLHSESTKKGKIKPVHL 121
KK+ +V GL +GKT L + L+D Q V ++ P + + +
Sbjct: 23 KKTGKLVFLGLDNAGKTTLLHMLKDDRLGQ-HVPTLHPTSEELTIAGMTFTT-------- 73
Query: 122 VDVPGHSRLRPKLDEFLPQAAGIVFVVDALEFLPNCSAASEYLYDILTNSTVVKKKIPVL 181
D+ GH + R +LP GIVF+VD + + E L ++T+ T+ +P+L
Sbjct: 74 FDLGGHVQARRVWKNYLPAINGIVFLVDCADH-ERLLESKEELDSLMTDETIA--NVPIL 130
Query: 182 ICCNKTDKVTAHTKEFIRK 200
I NK D+ A ++E +R+
Sbjct: 131 ILGNKIDRPEAISEERLRE 149
>sp|Q9QVY3|SAR1B_CRIGR GTP-binding protein SAR1b OS=Cricetulus griseus GN=SAR1B PE=1 SV=1
Length = 198
Score = 54.7 bits (130), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 66/139 (47%), Gaps = 12/139 (8%)
Query: 62 KKSTTIVLAGLSGSGKTVLFYQLRDGSTHQGTVTSMEPNEDTFVLHSESTKKGKIKPVHL 121
KK+ +V GL +GKT L + L+D Q V ++ P + + +
Sbjct: 23 KKTGKLVFLGLDNAGKTTLLHMLKDDRLGQ-HVPTLHPTSEELTIAGMTFTT-------- 73
Query: 122 VDVPGHSRLRPKLDEFLPQAAGIVFVVDALEFLPNCSAASEYLYDILTNSTVVKKKIPVL 181
D+ GH + R +LP GIVF+VD + + E L ++T+ T+ +P+L
Sbjct: 74 FDLGGHIQARRVWKNYLPAINGIVFLVDCADH-ERLLESKEELDSLMTDETIA--NVPIL 130
Query: 182 ICCNKTDKVTAHTKEFIRK 200
I NK D+ A ++E +R+
Sbjct: 131 ILGNKIDRPEAISEERLRE 149
>sp|Q5HZY2|SAR1B_RAT GTP-binding protein SAR1b OS=Rattus norvegicus GN=Sar1b PE=2 SV=1
Length = 198
Score = 54.7 bits (130), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 66/139 (47%), Gaps = 12/139 (8%)
Query: 62 KKSTTIVLAGLSGSGKTVLFYQLRDGSTHQGTVTSMEPNEDTFVLHSESTKKGKIKPVHL 121
KK+ +V GL +GKT L + L+D Q V ++ P + + +
Sbjct: 23 KKTGKLVFLGLDNAGKTTLLHMLKDDRLGQ-HVPTLHPTSEELTIAGMTFTT-------- 73
Query: 122 VDVPGHSRLRPKLDEFLPQAAGIVFVVDALEFLPNCSAASEYLYDILTNSTVVKKKIPVL 181
D+ GH + R +LP GIVF+VD + + E L ++T+ T+ +P+L
Sbjct: 74 FDLGGHLQARRVWKNYLPAINGIVFLVDCADH-ERLLESKEELDSLMTDETIA--NVPIL 130
Query: 182 ICCNKTDKVTAHTKEFIRK 200
I NK D+ A ++E +R+
Sbjct: 131 ILGNKIDRPEAISEERLRE 149
>sp|P36536|SAR1A_MOUSE GTP-binding protein SAR1a OS=Mus musculus GN=Sar1a PE=2 SV=1
Length = 198
Score = 54.3 bits (129), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 65/139 (46%), Gaps = 12/139 (8%)
Query: 62 KKSTTIVLAGLSGSGKTVLFYQLRDGSTHQGTVTSMEPNEDTFVLHSESTKKGKIKPVHL 121
KKS +V GL +GKT L L+D Q V ++ P + + +
Sbjct: 23 KKSGKLVFLGLDNAGKTTLLQMLKDDRLGQ-HVPTLHPTSEELTIAGMTFTT-------- 73
Query: 122 VDVPGHSRLRPKLDEFLPQAAGIVFVVDALEFLPNCSAASEYLYDILTNSTVVKKKIPVL 181
D+ GH + R +LP GIVF+VD + + E L ++T+ T+ +P+L
Sbjct: 74 FDLGGHEQARRVWKNYLPAINGIVFLVDCADHSRLMESKVE-LNALMTDETI--SNVPIL 130
Query: 182 ICCNKTDKVTAHTKEFIRK 200
I NK D+ A ++E +R+
Sbjct: 131 ILGNKIDRTDAISEEKLRE 149
>sp|Q8SQH8|ARF_ENCCU ADP-ribosylation factor OS=Encephalitozoon cuniculi (strain GB-M1)
GN=ARF-1 PE=1 SV=3
Length = 207
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 69/153 (45%), Gaps = 13/153 (8%)
Query: 55 LLQVFRRKKSTTIVLAGLSGSGKTVLFYQLRDGSTHQGTVTSMEPNEDTFVLHSESTKKG 114
L +F + +I + GL G+GKT L L+ G HQ TV T + E+ G
Sbjct: 16 LRGLFSGQSERSITMIGLDGAGKTTLLLYLQTGEVHQ-TVP-------TLGFNCENVTLG 67
Query: 115 KIKPVHLVDVPGHSRLRPKLDEFLPQAAGIVFVVDALEFLPNCSAASEYLYDILTNSTVV 174
+K + D+ G + +++ + GI+++VD + + E L+ IL ++
Sbjct: 68 SMK-FQVWDIGGQNSFMRFWHQYINEGCGIIYMVDCAD-PQRFGKSGEELWRIL---NIL 122
Query: 175 KKKIPVLICCNKTDKVTAHTKEFIRKQMEKEID 207
P+L+ NK D + H + + K + E +
Sbjct: 123 NSPRPLLVLANKIDLIREHERSEVVKSIRNEFN 155
>sp|O13950|SRPB_SCHPO Signal recognition particle receptor subunit beta
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=srp102 PE=3 SV=1
Length = 227
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 18/168 (10%)
Query: 61 RKKSTTIVLAGLSGSGKTVLFYQLRDGSTHQGTVTSMEPNEDTFVLHSESTKKGKIKPVH 120
+KK + L G S SGKT LF +L + TV S+EPNE + K G
Sbjct: 34 QKKLPAVFLIGPSDSGKTSLFCELI-YKEKKTTVPSIEPNEAVW-------KYG----AW 81
Query: 121 LVDVPGHSRLRPKLDEFLP---QAAGIVFVVDALEFLPNCSAASEYLYDILTNSTVVKKK 177
LVD+PGH R + + +VFV+++ + L+D + K
Sbjct: 82 LVDLPGHPRAKRWITTKFSGNYNVKAVVFVLNSATIDRDVHEVGLMLFDTILKCR--KHH 139
Query: 178 IP-VLICCNKTDKVTAHTKEFIRKQMEKEIDKLRASRSAVSEADVTND 224
+P +LI CNK D TA E I++ ++ E+ + ++ E+ V+ D
Sbjct: 140 VPHLLIACNKFDLFTAQPAEKIQQLLKAELHNILEEKNLQLESIVSED 187
>sp|A5DR82|SAR1_PICGU Small COPII coat GTPase SAR1 OS=Meyerozyma guilliermondii (strain
ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 /
NRRL Y-324) GN=SAR1 PE=3 SV=3
Length = 190
Score = 51.6 bits (122), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 63/135 (46%), Gaps = 20/135 (14%)
Query: 62 KKSTTIVLAGLSGSGKTVLFYQLRDGSTHQGTVTSMEPNEDTFVLH--SESTKKGKIKPV 119
K ++ GL +GKT L + L++ + +++P LH SE G ++
Sbjct: 18 NKHAKLLFLGLDNAGKTTLLHMLKNDR-----LATLQPT-----LHPTSEELAIGSVRFT 67
Query: 120 HLVDVPGHSRLRPKLDEFLPQAAGIVFVVDAL--EFLPNCSAASEYLYDILTNSTVVKKK 177
D+ GH + R ++ P+ GIVF+VDA E L A E L+ I S +
Sbjct: 68 TF-DLGGHQQARRLWKDYFPEVNGIVFLVDAADTERLAESKAELESLFRIEELS-----Q 121
Query: 178 IPVLICCNKTDKVTA 192
+P LI NK DK TA
Sbjct: 122 VPFLILGNKIDKSTA 136
>sp|Q6FUZ9|SAR1_CANGA Small COPII coat GTPase SAR1 OS=Candida glabrata (strain ATCC 2001
/ CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=SAR1
PE=3 SV=1
Length = 189
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 67/141 (47%), Gaps = 12/141 (8%)
Query: 62 KKSTTIVLAGLSGSGKTVLFYQLRDGSTHQGTVTSMEPNEDTFVLHSESTKKGKIKPVHL 121
K ++ GL +GKT L + L++ + +++P T+ SE G IK
Sbjct: 20 NKHGKLLFLGLDNAGKTTLLHMLKNDR-----LATLQP---TWHPTSEELAIGNIKFTTF 71
Query: 122 VDVPGHSRLRPKLDEFLPQAAGIVFVVDALEFLPNCSAASEYLYDILTNSTVVKKKIPVL 181
D+ GH + R ++ P+ GIVF+VD+ + P+ + D L N T + K +P +
Sbjct: 72 -DLGGHVQARRLWKDYFPEVNGIVFLVDSAD--PDRFDEARVELDALFNITEL-KDVPFV 127
Query: 182 ICCNKTDKVTAHTKEFIRKQM 202
I NK D A ++ +R +
Sbjct: 128 ILGNKIDAANAVSEAELRSAL 148
>sp|Q3SXC5|ARL14_MOUSE ADP-ribosylation factor-like protein 14 OS=Mus musculus GN=Arl14
PE=2 SV=1
Length = 192
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 12/152 (7%)
Query: 63 KSTTIVLAGLSGSGKTVLFYQLRDGSTHQGTVTSMEPNEDTFVLHSESTKKGKIKPVHLV 122
K I+L GL +GK+ L Y+L+ T T+ ++ N + L S T + +
Sbjct: 12 KQAHILLLGLDSAGKSTLLYRLKFAET-LATIPTIGFNVEMVQLQSSLT-------LTVW 63
Query: 123 DVPGHSRLRPKLDEFLPQAAGIVFVVDALEFLPNCSAASEYLYDILTNSTVVKKKIPVLI 182
DV G ++R D + A G+++VVD E + + IL N + K PV+I
Sbjct: 64 DVGGQEKMRTVWDCYCENAQGLMYVVDCSEGKKRLEDSRKEFKHILKNEHI--KNTPVVI 121
Query: 183 CCNKTDKVTAHTKEFIRKQMEKEIDKLRASRS 214
NK D A + E I + ++ KL ++R+
Sbjct: 122 LANKQDLPGALSAEDITRMF--KVKKLCSNRN 151
>sp|P0CR30|SAR1_CRYNJ Small COPII coat GTPase SAR1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=SAR1 PE=3 SV=1
Length = 189
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 71/143 (49%), Gaps = 16/143 (11%)
Query: 62 KKSTTIVLAGLSGSGKTVLFYQLRDGSTHQGTVTSMEPNEDTFVLH--SESTKKGKIKPV 119
KS ++ GL +GKT L + L++ + +++P LH SE G +K
Sbjct: 18 NKSAKLLFLGLDNAGKTTLLHMLKNDR-----LATLQPT-----LHPTSEELAIGNVK-F 66
Query: 120 HLVDVPGHSRLRPKLDEFLPQAAGIVFVVDALEFLPNCSAASEYLYDILTNSTVVKKKIP 179
D+ GH + R ++ P+ GIVF+VD+ + + +E L +L+ ++ ++P
Sbjct: 67 TTYDLGGHIQARRLWRDYFPEVDGIVFLVDSADAERFAESKAE-LDSLLSIESLA--QVP 123
Query: 180 VLICCNKTDKVTAHTKEFIRKQM 202
LI NK D A ++E +R ++
Sbjct: 124 FLILGNKIDAYGAVSEEQLRHEL 146
>sp|P0CR31|SAR1_CRYNB Small COPII coat GTPase SAR1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=SAR1 PE=3 SV=1
Length = 189
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 71/143 (49%), Gaps = 16/143 (11%)
Query: 62 KKSTTIVLAGLSGSGKTVLFYQLRDGSTHQGTVTSMEPNEDTFVLH--SESTKKGKIKPV 119
KS ++ GL +GKT L + L++ + +++P LH SE G +K
Sbjct: 18 NKSAKLLFLGLDNAGKTTLLHMLKNDR-----LATLQPT-----LHPTSEELAIGNVK-F 66
Query: 120 HLVDVPGHSRLRPKLDEFLPQAAGIVFVVDALEFLPNCSAASEYLYDILTNSTVVKKKIP 179
D+ GH + R ++ P+ GIVF+VD+ + + +E L +L+ ++ ++P
Sbjct: 67 TTYDLGGHIQARRLWRDYFPEVDGIVFLVDSADAERFAESKAE-LDSLLSIESLA--QVP 123
Query: 180 VLICCNKTDKVTAHTKEFIRKQM 202
LI NK D A ++E +R ++
Sbjct: 124 FLILGNKIDAYGAVSEEQLRHEL 146
>sp|P0C950|SAR1_ASPNG Small COPII coat GTPase SAR1 OS=Aspergillus niger GN=sar1 PE=3 SV=1
Length = 189
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 65/141 (46%), Gaps = 12/141 (8%)
Query: 62 KKSTTIVLAGLSGSGKTVLFYQLRDGSTHQGTVTSMEPNEDTFVLHSESTKKGKIKPVHL 121
K ++ GL +GKT L + L++ T+ +E+ + ++ T
Sbjct: 18 NKHAKLLFLGLDNAGKTTLLHMLKNDRVAILQPTAHPTSEELAIGNNRFTT--------- 68
Query: 122 VDVPGHSRLRPKLDEFLPQAAGIVFVVDALEFLPNCSAASEYLYDILTNSTVVKKKIPVL 181
D+ GH + R ++ P+ +GIVF+VDA + C S+ D L + K+P L
Sbjct: 69 FDLGGHQQARRLWKDYFPEVSGIVFLVDAKDH--ECFPESKAELDALLAMEEL-AKVPFL 125
Query: 182 ICCNKTDKVTAHTKEFIRKQM 202
I NK D A +++ +R Q+
Sbjct: 126 ILGNKIDHPDAVSEDDVRHQL 146
>sp|A1CRG9|SAR1_ASPCL Small COPII coat GTPase sar1 OS=Aspergillus clavatus (strain ATCC
1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
GN=sar1 PE=3 SV=1
Length = 189
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 65/143 (45%), Gaps = 16/143 (11%)
Query: 62 KKSTTIVLAGLSGSGKTVLFYQLRDGSTHQGTVTSMEPNEDTFVLHSESTKKGKIKPVHL 121
K ++ GL +GKT L + L++ T+ +E+ + ++ T
Sbjct: 18 NKHAKLLFLGLDNAGKTTLLHMLKNDRVATLQPTAHPTSEELAIGNNRFTT--------- 68
Query: 122 VDVPGHSRLRPKLDEFLPQAAGIVFVVDA--LEFLPNCSAASEYLYDILTNSTVVKKKIP 179
D+ GH + R ++ P+ +GIVF+VDA E P A + L + S K+P
Sbjct: 69 FDLGGHQQARRLWKDYFPEVSGIVFLVDAKDHERFPESKAELDALLAMEELS-----KVP 123
Query: 180 VLICCNKTDKVTAHTKEFIRKQM 202
LI NK D A +++ +R Q+
Sbjct: 124 FLILGNKIDHPDAVSEDELRHQL 146
>sp|Q9P4C8|SAR1_PICPG Small COPII coat GTPase SAR1 OS=Komagataella pastoris (strain GS115
/ ATCC 20864) GN=SAR1 PE=3 SV=1
Length = 190
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 12/141 (8%)
Query: 62 KKSTTIVLAGLSGSGKTVLFYQLRDGSTHQGTVTSMEPNEDTFVLHSESTKKGKIKPVHL 121
K ++ GL +GKT L + L++ + +++P T+ SE G ++
Sbjct: 18 NKHAKLLFLGLDNAGKTTLLHMLKNDR-----LATLQP---TWHPTSEELSIGNVRFTTF 69
Query: 122 VDVPGHSRLRPKLDEFLPQAAGIVFVVDALEFLPNCSAASEYLYDILTNSTVVKKKIPVL 181
D+ GH + R ++ P+ GIV++VD + P S D L + K+PVL
Sbjct: 70 -DLGGHEQARRVWKDYFPEVDGIVYLVDIAD--PERFEESRVELDALLKIEEL-SKVPVL 125
Query: 182 ICCNKTDKVTAHTKEFIRKQM 202
+ NK DK TA ++ +R +
Sbjct: 126 VLGNKIDKSTAVSENELRHAL 146
>sp|Q5BGB9|SAR1_EMENI Small COPII coat GTPase sar1 OS=Emericella nidulans (strain FGSC A4
/ ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=sar1
PE=3 SV=1
Length = 189
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 66/143 (46%), Gaps = 16/143 (11%)
Query: 62 KKSTTIVLAGLSGSGKTVLFYQLRDGSTHQGTVTSMEPNEDTFVLHSESTKKGKIKPVHL 121
K ++ GL +GKT L + L++ + T+ +E+ + ++ T
Sbjct: 18 NKHAKLLFLGLDNAGKTTLLHMLKNDRVAILSPTAHPTSEELVIGNNRFTT--------- 68
Query: 122 VDVPGHSRLRPKLDEFLPQAAGIVFVVDA--LEFLPNCSAASEYLYDILTNSTVVKKKIP 179
D+ GH + R ++ P+ +GIVF+VDA E P A + L + S K+P
Sbjct: 69 FDLGGHQQARRLWKDYFPEVSGIVFLVDAKDHERFPESKAELDALLAMEELS-----KVP 123
Query: 180 VLICCNKTDKVTAHTKEFIRKQM 202
L+ NK D A +++ +R Q+
Sbjct: 124 FLVLGNKIDHPDAVSEDELRHQL 146
>sp|Q0CUN7|SAR1_ASPTN Small COPII coat GTPase sar1 OS=Aspergillus terreus (strain NIH
2624 / FGSC A1156) GN=sar1 PE=3 SV=1
Length = 189
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 66/143 (46%), Gaps = 16/143 (11%)
Query: 62 KKSTTIVLAGLSGSGKTVLFYQLRDGSTHQGTVTSMEPNEDTFVLHSESTKKGKIKPVHL 121
K ++ GL +GKT L + L++ T+ +E+ + ++ T
Sbjct: 18 NKHAKLLFLGLDNAGKTTLLHMLKNDRVAILQPTAHPTSEELAIGNNRFTT--------- 68
Query: 122 VDVPGHSRLRPKLDEFLPQAAGIVFVVDALEF--LPNCSAASEYLYDILTNSTVVKKKIP 179
D+ GH + R ++ P+ +GIVF+VDA ++ P A + L + + K+P
Sbjct: 69 FDLGGHQQARRLWKDYFPEVSGIVFLVDAKDYERFPESKAELDALLAMEELA-----KVP 123
Query: 180 VLICCNKTDKVTAHTKEFIRKQM 202
LI NK D A +++ +R Q+
Sbjct: 124 FLILGNKIDHPDAVSEDELRHQL 146
>sp|Q4P0I7|SAR1_USTMA Small COPII coat GTPase SAR1 OS=Ustilago maydis (strain 521 / FGSC
9021) GN=SAR1 PE=3 SV=1
Length = 189
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 73/151 (48%), Gaps = 16/151 (10%)
Query: 54 LLLQVFRRKKSTTIVLAGLSGSGKTVLFYQLRDGSTHQGTVTSMEPNEDTFVLH--SEST 111
+L Q+ K+ I+ GL +GKT L + L++ + +++P LH SE
Sbjct: 10 ILAQLGLAHKNAKILFLGLDNAGKTTLLHMLKNDR-----LATLQPT-----LHPTSEEL 59
Query: 112 KKGKIKPVHLVDVPGHSRLRPKLDEFLPQAAGIVFVVDALEFLPNCSAASEYLYDILTNS 171
G++K D+ GH + R ++ P+ GIVF+VD + A +E L +L+
Sbjct: 60 AIGQVK-FTTYDLGGHQQARRLWKDYFPEVDGIVFLVDTQDHERFAEARAE-LDALLSIE 117
Query: 172 TVVKKKIPVLICCNKTDKVTAHTKEFIRKQM 202
+ +P LI NK D A ++E +R+ +
Sbjct: 118 EL--SSVPFLILGNKIDAPGAVSEEELRQAI 146
>sp|P0C583|SAR1_NEUCR Small COPII coat GTPase sar-1 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=sar-1 PE=3 SV=1
Length = 189
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 20/145 (13%)
Query: 62 KKSTTIVLAGLSGSGKTVLFYQLRDGSTHQGTVTSMEPNEDTFVLH--SESTKKGKIKPV 119
K ++ GL +GKT L + L++ V ++P LH SE G +K
Sbjct: 18 NKHGKLLFLGLDNAGKTTLLHMLKNDR-----VAILQPT-----LHPTSEELSVGNVK-F 66
Query: 120 HLVDVPGHSRLRPKLDEFLPQAAGIVFVVDA--LEFLPNCSAASEYLYDILTNSTVVKKK 177
D+ GH + R ++ P+ GIVF+VDA E LP A + L S K
Sbjct: 67 TTFDLGGHQQARRLWKDYFPEVNGIVFLVDAKDHERLPEAKAEIDALL-----SMEELAK 121
Query: 178 IPVLICCNKTDKVTAHTKEFIRKQM 202
+P ++ NK D A +++ +R+++
Sbjct: 122 VPFVVLGNKIDHPEAVSEDELRQRL 146
>sp|Q18510|ARL6_CAEEL ADP-ribosylation factor-like protein 6 OS=Caenorhabditis elegans
GN=arl-6 PE=2 SV=1
Length = 190
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 57/127 (44%), Gaps = 8/127 (6%)
Query: 62 KKSTTIVLAGLSGSGKTVLFYQLRDGSTHQGTVTSMEPNEDTFVLHSESTKKGKIKPVHL 121
KK IV+ GL SGKT + QL+ T + P V H + + H
Sbjct: 15 KKDVNIVVVGLDNSGKTTILNQLKTPETRSQQIV---PT----VGHVVTNFSTQNLSFHA 67
Query: 122 VDVPGHSRLRPKLDEFLPQAAGIVFVVDALEFLPNCSAASEYLYDILTNSTVVKKKIPVL 181
D+ G + R + + + G++FV+D+ + L + L ++ + VV + IP++
Sbjct: 68 FDMAGQMKYRSTWESYFHSSQGVIFVLDSSDRL-RMELLKDELMMVMEHKDVVSRGIPIV 126
Query: 182 ICCNKTD 188
I NK D
Sbjct: 127 ILANKMD 133
>sp|Q5EMZ6|SAR1_MAGO7 Small COPII coat GTPase SAR1 OS=Magnaporthe oryzae (strain 70-15 /
ATCC MYA-4617 / FGSC 8958) GN=SAR1 PE=2 SV=1
Length = 189
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 65/145 (44%), Gaps = 20/145 (13%)
Query: 62 KKSTTIVLAGLSGSGKTVLFYQLRDGSTHQGTVTSMEPNEDTFVLH--SESTKKGKIKPV 119
K ++ GL +GKT L + L++ V ++P LH SE G ++
Sbjct: 18 NKHAKLLFLGLDNAGKTTLLHMLKNDR-----VAILQPT-----LHPTSEELAIGNVR-F 66
Query: 120 HLVDVPGHSRLRPKLDEFLPQAAGIVFVVDALEF--LPNCSAASEYLYDILTNSTVVKKK 177
D+ GH + R ++ P+ GIVF+VDA + P A + L S K
Sbjct: 67 TTFDLGGHQQARRLWKDYFPEVNGIVFLVDAKDHDRFPEAKAELDALL-----SMEELAK 121
Query: 178 IPVLICCNKTDKVTAHTKEFIRKQM 202
+P +I NK D A ++E +R Q+
Sbjct: 122 VPFVILGNKIDHPEAISEEELRHQL 146
>sp|P78976|SAR1_HYPJE Small COPII coat GTPase sar1 OS=Hypocrea jecorina GN=sar1 PE=3 SV=1
Length = 189
Score = 48.1 bits (113), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 66/145 (45%), Gaps = 20/145 (13%)
Query: 62 KKSTTIVLAGLSGSGKTVLFYQLRDGSTHQGTVTSMEPNEDTFVLH--SESTKKGKIKPV 119
K ++ GL +GKT L + L++ V ++P LH SE G ++
Sbjct: 18 NKHAKLLFLGLDNAGKTTLLHMLKNDR-----VAILQP-----TLHPTSEELAIGNVR-F 66
Query: 120 HLVDVPGHSRLRPKLDEFLPQAAGIVFVVDA--LEFLPNCSAASEYLYDILTNSTVVKKK 177
+ D+ GH + R ++ P G+VF+VDA E P A + L + S K
Sbjct: 67 NTFDLGGHQQARRIWRDYFPDVNGVVFLVDAKDHERFPEAKAELDALLSMEELS-----K 121
Query: 178 IPVLICCNKTDKVTAHTKEFIRKQM 202
+P +I NK D A +++ +R Q+
Sbjct: 122 VPFVILGNKIDHPDAVSEDELRHQL 146
>sp|Q4WJS7|SAR1_ASPFU Small COPII coat GTPase sar1 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=sar1 PE=3
SV=1
Length = 189
Score = 48.1 bits (113), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 65/143 (45%), Gaps = 16/143 (11%)
Query: 62 KKSTTIVLAGLSGSGKTVLFYQLRDGSTHQGTVTSMEPNEDTFVLHSESTKKGKIKPVHL 121
K ++ GL +GKT L + L++ T+ +E+ + ++ T
Sbjct: 18 NKHAKLLFLGLDNAGKTTLLHMLKNDRVATLQPTAHPTSEELAIGNNRFTT--------- 68
Query: 122 VDVPGHSRLRPKLDEFLPQAAGIVFVVDA--LEFLPNCSAASEYLYDILTNSTVVKKKIP 179
D+ GH + R ++ P+ +GIVF+VDA E P A + L + + K+P
Sbjct: 69 FDLGGHQQARRLWKDYFPEVSGIVFLVDAKDHERFPESKAELDALLAMEELA-----KVP 123
Query: 180 VLICCNKTDKVTAHTKEFIRKQM 202
LI NK D A +++ +R Q+
Sbjct: 124 FLILGNKIDHPDAVSEDELRHQL 146
>sp|A1D4D1|SAR1_NEOFI Small COPII coat GTPase sar1 OS=Neosartorya fischeri (strain ATCC
1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=sar1 PE=3
SV=1
Length = 189
Score = 48.1 bits (113), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 65/143 (45%), Gaps = 16/143 (11%)
Query: 62 KKSTTIVLAGLSGSGKTVLFYQLRDGSTHQGTVTSMEPNEDTFVLHSESTKKGKIKPVHL 121
K ++ GL +GKT L + L++ T+ +E+ + ++ T
Sbjct: 18 NKHAKLLFLGLDNAGKTTLLHMLKNDRVATLQPTAHPTSEELAIGNNRFTT--------- 68
Query: 122 VDVPGHSRLRPKLDEFLPQAAGIVFVVDA--LEFLPNCSAASEYLYDILTNSTVVKKKIP 179
D+ GH + R ++ P+ +GIVF+VDA E P A + L + + K+P
Sbjct: 69 FDLGGHQQARRLWKDYFPEVSGIVFLVDAKDHERFPESKAELDALLAMEELA-----KVP 123
Query: 180 VLICCNKTDKVTAHTKEFIRKQM 202
LI NK D A +++ +R Q+
Sbjct: 124 FLILGNKIDHPDAVSEDELRHQL 146
>sp|Q60Z38|ARL6_CAEBR ADP-ribosylation factor-like protein 6 OS=Caenorhabditis briggsae
GN=arl-6 PE=3 SV=1
Length = 190
Score = 47.8 bits (112), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 57/127 (44%), Gaps = 8/127 (6%)
Query: 62 KKSTTIVLAGLSGSGKTVLFYQLRDGSTHQGTVTSMEPNEDTFVLHSESTKKGKIKPVHL 121
KK IV+ GL SGKT + QL+ T + P V H + + H
Sbjct: 15 KKDVNIVVVGLDNSGKTTILNQLKTPETRSQQIV---PT----VGHVVTNFSTQNLSFHA 67
Query: 122 VDVPGHSRLRPKLDEFLPQAAGIVFVVDALEFLPNCSAASEYLYDILTNSTVVKKKIPVL 181
D+ G + R + + + G++FV+D+ + + + L+ +L + V + IPV+
Sbjct: 68 FDMAGQMKYRSTWESYFHSSQGVIFVLDSSDRV-RMELLKDELWLVLDHKDVASRGIPVV 126
Query: 182 ICCNKTD 188
I NK D
Sbjct: 127 ILANKMD 133
>sp|Q54R04|ARL8_DICDI ADP-ribosylation factor-like protein 8 OS=Dictyostelium discoideum
GN=arl8 PE=3 SV=1
Length = 185
Score = 47.8 bits (112), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 11/127 (8%)
Query: 62 KKSTTIVLAGLSGSGKTVLFYQLRDGSTHQGTVTSMEPNEDTFVLHSESTKKGKIKPVHL 121
K+ + L GL GSGKT L + +G + T+ T + + KG + + L
Sbjct: 17 KQEMELTLVGLQGSGKTTLVNVISNGGFIEDTIP-------TIGFNMKKVTKGNV-TIKL 68
Query: 122 VDVPGHSRLRPKLDEFLPQAAGIVFVVDALEFLPNCSAASEYLYDILTNSTVVKKKIPVL 181
D+ G R R + + IVFVVD+ + + + L D++ + KIP+L
Sbjct: 69 WDIGGQPRFRSMWERYCRGVNAIVFVVDSAD-REKFEQSKQALQDLINKPPLA--KIPLL 125
Query: 182 ICCNKTD 188
+ NK D
Sbjct: 126 VVANKND 132
>sp|P20606|SAR1_YEAST Small COPII coat GTPase SAR1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=SAR1 PE=1 SV=1
Length = 190
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 12/141 (8%)
Query: 62 KKSTTIVLAGLSGSGKTVLFYQLRDGSTHQGTVTSMEPNEDTFVLHSESTKKGKIKPVHL 121
K ++ GL +GKT L + L++ + +++P T+ SE G IK
Sbjct: 21 NKHGKLLFLGLDNAGKTTLLHMLKNDR-----LATLQP---TWHPTSEELAIGNIK-FTT 71
Query: 122 VDVPGHSRLRPKLDEFLPQAAGIVFVVDALEFLPNCSAASEYLYDILTNSTVVKKKIPVL 181
D+ GH + R ++ P+ GIVF+VDA + P + D L N + K +P +
Sbjct: 72 FDLGGHIQARRLWKDYFPEVNGIVFLVDAAD--PERFDEARVELDALFNIAEL-KDVPFV 128
Query: 182 ICCNKTDKVTAHTKEFIRKQM 202
I NK D A ++ +R +
Sbjct: 129 ILGNKIDAPNAVSEAELRSAL 149
>sp|Q877B9|SAR1_ASPOR Small COPII coat GTPase sar1 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=sar1 PE=3 SV=1
Length = 189
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 65/143 (45%), Gaps = 16/143 (11%)
Query: 62 KKSTTIVLAGLSGSGKTVLFYQLRDGSTHQGTVTSMEPNEDTFVLHSESTKKGKIKPVHL 121
K ++ GL +GKT L + L++ T+ +E+ + ++ T
Sbjct: 18 NKHAKLLFLGLDNAGKTTLLHMLKNDRVAVLQPTAHPTSEELAIGNNRFTT--------- 68
Query: 122 VDVPGHSRLRPKLDEFLPQAAGIVFVVDA--LEFLPNCSAASEYLYDILTNSTVVKKKIP 179
D+ GH + R ++ P+ +GIVF+VDA E P A + L + + K+P
Sbjct: 69 FDLGGHQQARRLWKDYFPEVSGIVFLVDAKDHERFPESKAELDALLAMEELA-----KVP 123
Query: 180 VLICCNKTDKVTAHTKEFIRKQM 202
LI NK D A +++ +R Q+
Sbjct: 124 FLILGNKIDHPDAVSEDELRHQL 146
>sp|Q8MQT8|SAR1_GIAIN GTP-binding protein Sar1 OS=Giardia intestinalis GN=SAR1 PE=3 SV=1
Length = 191
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 66/136 (48%), Gaps = 14/136 (10%)
Query: 62 KKSTTIVLAGLSGSGKTVLFYQLRDGSTHQGTVTSMEPNEDTFVLHSESTKKGKIKPVHL 121
KK TIV GL +GK+ L L++ +T T++ P + S+ G I+
Sbjct: 18 KKKATIVFVGLDNAGKSTLLAMLKNSAT-----TTVAPTQQP---TSQELVMGSIR-FKT 68
Query: 122 VDVPGHSRLRPKLDEFLPQAAGIVFVVDALEFLPN-CSAASEYLYDILTNSTVVKKKIPV 180
D+ GH R ++++ + GIVF+VD+ + P+ + L ++L N + P+
Sbjct: 69 FDLGGHEVARQLWEQYVTNSDGIVFLVDSAD--PSRFEESRRTLQELLDNHDLA--TTPI 124
Query: 181 LICCNKTDKVTAHTKE 196
LI NK D TA + E
Sbjct: 125 LILSNKVDIQTAVSME 140
>sp|P0C951|SAR1_ASPNC Small COPII coat GTPase SAR1 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=sar1 PE=3 SV=1
Length = 189
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 65/143 (45%), Gaps = 16/143 (11%)
Query: 62 KKSTTIVLAGLSGSGKTVLFYQLRDGSTHQGTVTSMEPNEDTFVLHSESTKKGKIKPVHL 121
K ++ GL +GKT L + L++ T+ +E+ + ++ T
Sbjct: 18 NKHAKLLFLGLDNAGKTTLLHMLKNDRVAILQPTAHPTSEELAIGNNRFTT--------- 68
Query: 122 VDVPGHSRLRPKLDEFLPQAAGIVFVVDA--LEFLPNCSAASEYLYDILTNSTVVKKKIP 179
D+ GH + R ++ P+ +GIVF+VDA E P A + L + + K+P
Sbjct: 69 FDLGGHQQARRLWKDYFPEVSGIVFLVDAKDHERFPESKAELDALLAMEELA-----KVP 123
Query: 180 VLICCNKTDKVTAHTKEFIRKQM 202
LI NK D A +++ +R Q+
Sbjct: 124 FLILGNKIDHPDAVSEDELRHQL 146
>sp|Q2HA55|SAR1_CHAGB Small COPII coat GTPase SAR1 OS=Chaetomium globosum (strain ATCC
6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970)
GN=SAR1 PE=3 SV=2
Length = 190
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 20/145 (13%)
Query: 62 KKSTTIVLAGLSGSGKTVLFYQLRDGSTHQGTVTSMEPNEDTFVLH--SESTKKGKIKPV 119
K ++ GL +GKT L + L++ V ++P LH SE G ++
Sbjct: 18 NKHAKLLFLGLDNAGKTTLLHMLKNDR-----VAILQP-----TLHPTSEELSIGNVR-F 66
Query: 120 HLVDVPGHSRLRPKLDEFLPQAAGIVFVVDA--LEFLPNCSAASEYLYDILTNSTVVKKK 177
D+ GH + R ++ P+ G+VF+VDA E P A + L + S K
Sbjct: 67 TTFDLGGHQQARRLWKDYFPEVNGVVFLVDAKDHERFPEAKAELDALLSMEELS-----K 121
Query: 178 IPVLICCNKTDKVTAHTKEFIRKQM 202
+P ++ NK D A +++ +R Q+
Sbjct: 122 VPFVVLGNKIDHPDAVSEDELRHQL 146
>sp|P40994|ARF3_YEAST ADP-ribosylation factor 3 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=ARF3 PE=1 SV=2
Length = 183
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 58/126 (46%), Gaps = 12/126 (9%)
Query: 63 KSTTIVLAGLSGSGKTVLFYQLRDGSTHQGTVTSMEPNEDTFVLHSESTKKGKIKPVHLV 122
K I++ GL +GKT + Y+L+ + ++ + T + E+ +K ++
Sbjct: 16 KEMKILMLGLDKAGKTTILYKLK--------LNKIKTSTPTVGFNVETVTYKNVK-FNMW 66
Query: 123 DVPGHSRLRPKLDEFLPQAAGIVFVVDALEFLPNCSAASEYLYDILTNSTVVKKKIPVLI 182
DV G RLRP + P ++FV+D+ A E LY I+ + + + +L+
Sbjct: 67 DVGGQQRLRPLWRHYFPATTALIFVIDS-SARNRMEEAKEELYSIIGEKEM--ENVVLLV 123
Query: 183 CCNKTD 188
NK D
Sbjct: 124 WANKQD 129
>sp|Q54V47|ARFJ_DICDI ADP-ribosylation factor J OS=Dictyostelium discoideum GN=arrJ PE=3
SV=1
Length = 188
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 68/146 (46%), Gaps = 13/146 (8%)
Query: 55 LLQVFRRKKSTTIVLAGLSGSGKTVLFYQLRDGSTHQGTVTSMEPNEDTFVLHSESTKKG 114
+ +F KK T I++ GL G+GK+ L Y+L+ G V S P T + E+ +
Sbjct: 16 IFSLFEGKKETRILMIGLDGAGKSTLLYKLK-----LGDVVSTIP---TIGFNVETIEYK 67
Query: 115 KIKPVHLVDVPGHSRLRPKLDEFLPQAAGIVFVVDALEFLPNCSAASEYLYDILTNSTVV 174
+ + + DV G ++RP + + ++FVVD+ + E + ++L +
Sbjct: 68 NL-SMTVWDVGGQHKIRPLWKHYYHGSNAVIFVVDSTD-RERMDEVKEEIDNLLIQDEL- 124
Query: 175 KKKIPVLICCNKTDKVTA-HTKEFIR 199
K +L+ NK D A +T E +
Sbjct: 125 -KGTQILVFANKQDMNNAMNTAEIVN 149
>sp|Q9D416|AR13A_MOUSE ADP-ribosylation factor-like protein 13A OS=Mus musculus GN=Arl13a
PE=2 SV=1
Length = 372
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 62/135 (45%), Gaps = 18/135 (13%)
Query: 61 RKKSTTIVLAGLSGSGKTVL---FYQLRDGSTHQGTVTSMEPNEDTFVLHSESTKKGKIK 117
++++ TI++ GL SGK+ L F +L H+ M P + T +L
Sbjct: 18 KQRNVTIIVIGLDNSGKSRLIEAFQRLIPSKMHK----EMRPTQTTLLLDDYQ------- 66
Query: 118 PVHLVDVPGHSRLRPKLDEFLPQAAGIVFVVDALEFLPNCSAASEYLYDILTNSTVVKKK 177
V + D+ G + R K + QA G++FVVD+ + + L I+ + V K
Sbjct: 67 -VSIYDLTGDVKGREKWSSYYAQAHGLIFVVDSSD-IARIQEVKIILTRIMFDKRVSGK- 123
Query: 178 IPVLICCNKTDKVTA 192
P+LI NK DK A
Sbjct: 124 -PILILANKQDKKNA 137
>sp|Q23445|SAR1_CAEEL GTP-binding protein SAR1 OS=Caenorhabditis elegans GN=ZK180.4 PE=3
SV=1
Length = 193
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 64/141 (45%), Gaps = 12/141 (8%)
Query: 62 KKSTTIVLAGLSGSGKTVLFYQLRDGSTHQGTVTSMEPNEDTFVLHSESTKKGKIKPVHL 121
K +V GL +GKT L + L+D Q V ++ P SE G I
Sbjct: 19 NKKGKLVFLGLDNAGKTTLLHMLKDDRIAQ-HVPTLHPT-------SEQMSLGGIS-FTT 69
Query: 122 VDVPGHSRLRPKLDEFLPQAAGIVFVVDALEFLPNCSAASEYLYDILTNSTVVKKKIPVL 181
D+ GH++ R ++ P +VF++D + + E L +L + + +PVL
Sbjct: 70 YDLGGHAQARRVWKDYFPAVDAVVFLIDVADAERMQESRVE-LESLLQDEQIA--SVPVL 126
Query: 182 ICCNKTDKVTAHTKEFIRKQM 202
I NK DK A +++ ++ Q+
Sbjct: 127 ILGNKIDKPGALSEDQLKWQL 147
>sp|P40940|ARF3_ARATH ADP-ribosylation factor 3 OS=Arabidopsis thaliana GN=ARF3 PE=1 SV=2
Length = 182
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 13/131 (9%)
Query: 58 VFRRKKSTTIVLAGLSGSGKTVLFYQLRDGSTHQGTVTSMEPNEDTFVLHSESTKKGKIK 117
VF K++ +VL GL +GKT + Y+L+ G V S P T + E+ + IK
Sbjct: 12 VFGNKEARILVL-GLDNAGKTTILYRLQ-----MGEVVSTIP---TIGFNVETVQYNNIK 62
Query: 118 PVHLVDVPGHSRLRPKLDEFLPQAAGIVFVVDALEFLPNCSAASEYLYDILTNSTVVKKK 177
+ D+ G + +RP + P +++VVD+ + A E + IL + K
Sbjct: 63 -FQVWDLGGQTSIRPYWRCYFPNTQAVIYVVDSSD-TDRIGVAKEEFHAILEEDEL--KG 118
Query: 178 IPVLICCNKTD 188
VLI NK D
Sbjct: 119 AVVLIFANKQD 129
>sp|Q6BVA7|SAR1_DEBHA Small COPII coat GTPase SAR1 OS=Debaryomyces hansenii (strain ATCC
36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=SAR1 PE=3 SV=1
Length = 190
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 61/135 (45%), Gaps = 20/135 (14%)
Query: 62 KKSTTIVLAGLSGSGKTVLFYQLRDGSTHQGTVTSMEPNEDTFVLH--SESTKKGKIKPV 119
K ++ GL +GKT L + L++ + +++P LH SE G ++
Sbjct: 18 NKHAKLLFLGLDNAGKTTLLHMLKNDR-----LATLQP-----TLHPTSEELAIGSVR-F 66
Query: 120 HLVDVPGHSRLRPKLDEFLPQAAGIVFVVDAL--EFLPNCSAASEYLYDILTNSTVVKKK 177
D+ GH + R ++ P+ GIVF+VDA E A E L+ I ++V
Sbjct: 67 TTFDLGGHQQARRLWKDYFPEVNGIVFLVDAADPERFAESKAELESLFKIEELASV---- 122
Query: 178 IPVLICCNKTDKVTA 192
P LI NK D +A
Sbjct: 123 -PFLILGNKIDASSA 136
>sp|Q96361|ARF1_BRARP ADP-ribosylation factor 1 OS=Brassica rapa subsp. pekinensis
GN=ARF1 PE=2 SV=3
Length = 182
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 13/131 (9%)
Query: 58 VFRRKKSTTIVLAGLSGSGKTVLFYQLRDGSTHQGTVTSMEPNEDTFVLHSESTKKGKIK 117
VF K++ +VL GL +GKT + Y+L+ G V S P T + E+ + IK
Sbjct: 12 VFGNKEARILVL-GLDNAGKTTILYRLQ-----MGEVVSTIP---TIGFNVETVQYNNIK 62
Query: 118 PVHLVDVPGHSRLRPKLDEFLPQAAGIVFVVDALEFLPNCSAASEYLYDILTNSTVVKKK 177
+ D+ G + +RP + P +++VVD+ + A E + IL + K
Sbjct: 63 -FQVWDLGGQTSIRPYWRCYFPNTQAVIYVVDSSD-TDRIGVAKEEFHAILEEEEL--KG 118
Query: 178 IPVLICCNKTD 188
VLI NK D
Sbjct: 119 AVVLIFANKQD 129
>sp|A3LTA2|SAR1_PICST Small COPII coat GTPase SAR1 OS=Scheffersomyces stipitis (strain
ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545)
GN=SAR1 PE=3 SV=1
Length = 190
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 60/135 (44%), Gaps = 20/135 (14%)
Query: 62 KKSTTIVLAGLSGSGKTVLFYQLRDGSTHQGTVTSMEPNEDTFVLH--SESTKKGKIKPV 119
K ++ GL +GKT L + L++ + +++P LH SE G ++
Sbjct: 18 NKHAKLLFLGLDNAGKTTLLHMLKNDR-----LATLQPT-----LHPTSEELAIGSVR-F 66
Query: 120 HLVDVPGHSRLRPKLDEFLPQAAGIVFVVDAL--EFLPNCSAASEYLYDILTNSTVVKKK 177
D+ GH + R ++ P+ GIVF+VDA E A E L+ I S V
Sbjct: 67 TTFDLGGHQQARRLWKDYFPEVNGIVFLVDAADPERFAESKAELESLFKIEELSHV---- 122
Query: 178 IPVLICCNKTDKVTA 192
P LI NK D TA
Sbjct: 123 -PFLILGNKIDVPTA 136
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,886,218
Number of Sequences: 539616
Number of extensions: 3675836
Number of successful extensions: 18202
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 186
Number of HSP's successfully gapped in prelim test: 705
Number of HSP's that attempted gapping in prelim test: 17799
Number of HSP's gapped (non-prelim): 902
length of query: 268
length of database: 191,569,459
effective HSP length: 115
effective length of query: 153
effective length of database: 129,513,619
effective search space: 19815583707
effective search space used: 19815583707
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)