Query 024387
Match_columns 268
No_of_seqs 198 out of 1325
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 07:22:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024387.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024387hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2haq_A Cyclophilin; rotamase, 100.0 1.5E-53 5E-58 364.6 19.7 167 96-264 6-172 (172)
2 3ich_A Peptidyl-prolyl CIS-tra 100.0 4.5E-53 1.5E-57 366.3 20.0 170 96-266 10-179 (188)
3 2cmt_A Peptidyl-prolyl CIS-tra 100.0 1.1E-52 3.8E-57 359.2 21.8 166 98-265 7-172 (172)
4 2z6w_A Peptidyl-prolyl CIS-tra 100.0 1.4E-52 5E-57 356.3 21.7 164 100-265 2-165 (165)
5 3pmp_A Cyclophilin A; peptidyl 100.0 1.6E-52 5.4E-57 355.7 21.6 163 101-265 2-164 (164)
6 2wfi_A Peptidyl-prolyl CIS-tra 100.0 1.6E-52 5.3E-57 360.4 21.8 163 100-264 8-179 (179)
7 4fru_A Cyclophilin B, peptidyl 100.0 9.1E-53 3.1E-57 363.5 20.3 169 97-266 8-176 (185)
8 2he9_A NK-tumor recognition pr 100.0 2.1E-52 7.1E-57 363.2 21.7 169 96-266 14-191 (192)
9 1a58_A Cyclophilin; isomerase, 100.0 3.9E-52 1.3E-56 357.3 21.9 165 100-265 5-177 (177)
10 2r99_A Peptidyl-prolyl CIS-tra 100.0 4.3E-52 1.5E-56 355.8 22.0 165 99-265 9-173 (173)
11 2igv_A Peptidyl-prolyl CIS-tra 100.0 3.6E-52 1.2E-56 356.3 20.9 164 100-265 2-172 (173)
12 3rdd_A Peptidyl-prolyl CIS-tra 100.0 5.2E-52 1.8E-56 358.5 20.7 171 93-265 14-184 (184)
13 1qng_A Peptidyl-prolyl CIS-tra 100.0 4.1E-52 1.4E-56 355.1 19.7 162 100-264 2-170 (170)
14 1mzw_A Cyclophilin H, U-snRNP- 100.0 3.7E-52 1.3E-56 357.4 19.0 165 100-264 9-177 (177)
15 2poy_A Peptidyl-prolyl CIS-tra 100.0 1.4E-51 5E-56 356.2 19.9 164 98-263 16-186 (186)
16 3k2c_A Peptidyl-prolyl CIS-tra 100.0 4.8E-51 1.6E-55 354.9 21.6 166 99-266 25-192 (193)
17 2c3b_A Ppiase, cyclophilin; is 100.0 2.4E-51 8.2E-56 350.9 14.5 163 100-264 2-172 (172)
18 1z81_A Cyclophilin; structural 100.0 1E-49 3.5E-54 354.3 18.8 164 100-264 58-229 (229)
19 2ose_A Probable peptidyl-proly 100.0 5.9E-49 2E-53 350.8 17.5 164 100-266 13-208 (234)
20 2poe_A Cyclophilin-like protei 100.0 2.6E-47 8.7E-52 329.4 16.7 155 105-265 16-175 (185)
21 1ihg_A Cyclophilin 40; ppiase 100.0 9.1E-47 3.1E-51 353.5 20.8 164 101-266 15-186 (370)
22 2ok3_A Peptidyl-prolyl CIS-tra 100.0 6.4E-47 2.2E-51 320.3 17.1 149 113-266 7-157 (161)
23 2fu0_A Cyclophilin, putative; 100.0 6.3E-47 2.1E-51 320.1 16.6 149 112-265 11-160 (160)
24 2x7k_A Peptidyl-prolyl CIS-tra 100.0 1.9E-46 6.4E-51 319.0 17.3 154 101-264 11-165 (166)
25 2b71_A Cyclophilin-like protei 100.0 3.9E-46 1.3E-50 324.5 18.4 156 101-266 38-194 (196)
26 1zkc_A Peptidyl-prolyl CIS-tra 100.0 4.1E-46 1.4E-50 324.5 18.4 149 113-266 26-176 (197)
27 2a2n_A Peptidylprolyl isomeras 100.0 2.7E-46 9.2E-51 320.7 15.1 150 109-263 24-175 (176)
28 3bo7_A Peptidyl-prolyl CIS-tra 100.0 1.1E-45 3.7E-50 323.0 17.1 149 113-266 13-174 (201)
29 2k7n_A Peptidyl-prolyl CIS-tra 100.0 1.3E-45 4.6E-50 322.5 16.0 156 101-266 11-167 (203)
30 1w74_A Peptidyl-prolyl CIS-tra 100.0 5.9E-45 2E-49 316.0 16.8 147 112-264 29-191 (191)
31 2hq6_A Serologically defined c 100.0 9.6E-45 3.3E-49 313.3 16.9 161 95-266 18-181 (185)
32 1v9t_A Cyclophilin B; beta bar 100.0 2.7E-44 9.3E-49 305.5 16.0 154 100-265 3-166 (166)
33 1lop_A Cyclophilin A; rotamase 100.0 3.7E-44 1.3E-48 304.2 13.0 146 112-265 5-164 (164)
34 3bkp_A Cyclophilin; malaria, i 100.0 1.5E-43 5.1E-48 315.5 16.5 162 94-266 14-194 (232)
35 3s6m_A Peptidyl-prolyl CIS-tra 100.0 3.5E-43 1.2E-47 298.9 14.5 145 112-264 9-167 (167)
36 3rfy_A Peptidyl-prolyl CIS-tra 100.0 1.1E-36 3.8E-41 286.3 9.4 141 98-244 165-345 (369)
37 3kop_A Uncharacterized protein 94.5 0.17 5.9E-06 42.8 8.7 33 105-139 23-56 (188)
38 2nnz_A Hypothetical protein; b 91.0 0.24 8.2E-06 40.8 4.5 105 107-242 33-143 (153)
39 1zx8_A Hypothetical protein TM 52.4 29 0.001 27.6 5.9 95 116-242 22-124 (136)
No 1
>2haq_A Cyclophilin; rotamase, proline, isomerase, CIS-trans, protozoa, KAla-AZAR.; 1.97A {Leishmania donovani} PDB: 3eov_A* 3bt8_A
Probab=100.00 E-value=1.5e-53 Score=364.57 Aligned_cols=167 Identities=63% Similarity=1.075 Sum_probs=160.6
Q ss_pred ccccccceEEEEEEECCeeeeeEEEEEcCCCChHHHHHHHHHHhcCCCCcccCCCEEEEEEcCceeeeCCCcCCCCCCCc
Q 024387 96 LQAKVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTAGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGI 175 (268)
Q Consensus 96 ~~~~~~~~v~fDi~i~~t~~GrIvIeL~~d~aP~tv~nF~~Lc~~G~kg~gY~g~~f~Rvi~~f~iqgGd~~~~~g~gg~ 175 (268)
..|.++++|||||.++++++|+|+||||++.||+||+||++||+ |.++|+|+|+.|||++|+|||||||+..++|+|+.
T Consensus 6 ~~~~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~-g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~ 84 (172)
T 2haq_A 6 HEPEVTAKVYFDVMIDSEPLGRITIGLFGKDAPLTTENFRQLCT-GEHGFGYKDSIFHRVIQNFMIQGGDFTNFDGTGGK 84 (172)
T ss_dssp -CCCCCEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHH-TTTSCCSTTCBCCEEETTTEEEECCTTTSSSSCCC
T ss_pred CCCCCCCeEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHhc-cCCCcccCCCEEEEEECCCEEecCCccCCCCCCCc
Confidence 35778999999999999999999999999999999999999997 66788999999999999999999998888999999
Q ss_pred cccCCCCCCCccccccCCCeEEEEecCCCCCCCccceEEecCCCCCCCCceEEEEEEcCHHHHHHhhcCCCCCCCCCCCC
Q 024387 176 SIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVP 255 (268)
Q Consensus 176 s~~g~~~~de~~~l~h~~~G~lsma~~gp~s~gSqFfItl~~~~~LDg~~~VFG~VveGmdvL~~I~~~~td~~~~P~~~ 255 (268)
++||+.|++|++.++|. +|+|+||+.+|++++|||||++.++++||++|+|||+|++|||||++|++++++.+++|.++
T Consensus 85 si~g~~f~dE~~~l~h~-~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~vFG~Vv~G~dvv~~I~~~~t~~~~~P~~~ 163 (172)
T 2haq_A 85 SIYGEKFADENLNVKHF-VGALSMANAGPNTNGSQFFITTAPTPWLDGRHVVFGKVLDGMDVVLRIEKTKTNSHDRPVKP 163 (172)
T ss_dssp CSSSSCBCCCCCCSCCC-TTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCGGGCBSSC
T ss_pred cccCCcccCcCCCcccC-ceEEEEccCCCCCcccEEEEECCCCCccCCCEeEEEEEeCCHHHHHHHHhCCcCCCCcCCCC
Confidence 99999999999999998 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEeeeEe
Q 024387 256 CRIINSGEL 264 (268)
Q Consensus 256 I~I~~cGvL 264 (268)
|+|.+||+|
T Consensus 164 v~I~~~g~l 172 (172)
T 2haq_A 164 VKIVASGEL 172 (172)
T ss_dssp EEEEEEEEC
T ss_pred eEEEEeEEC
Confidence 999999987
No 2
>3ich_A Peptidyl-prolyl CIS-trans isomerase B; beta sandwich, cyclosporin, endoplasmic reticulum, glycoprot isomerase, rotamase; 1.20A {Homo sapiens} PDB: 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=4.5e-53 Score=366.29 Aligned_cols=170 Identities=62% Similarity=1.065 Sum_probs=163.1
Q ss_pred ccccccceEEEEEEECCeeeeeEEEEEcCCCChHHHHHHHHHHhcCCCCcccCCCEEEEEEcCceeeeCCCcCCCCCCCc
Q 024387 96 LQAKVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTAGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGI 175 (268)
Q Consensus 96 ~~~~~~~~v~fDi~i~~t~~GrIvIeL~~d~aP~tv~nF~~Lc~~G~kg~gY~g~~f~Rvi~~f~iqgGd~~~~~g~gg~ 175 (268)
..|.++++|||||.++++++|+|+||||.+.||+||+||++||+ |.+|++|+|+.||||+|+|||||||+..++|+|+.
T Consensus 10 ~~p~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~-g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~ 88 (188)
T 3ich_A 10 KGPKVTVKVYFDLRIGDEDVGRVIFGLFGKTVPKTVDNFVALAT-GEKGFGYKNSKFHRVIKDFMIQGGDFTRGDGTGGK 88 (188)
T ss_dssp CSCEEEEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHH-TTTSCSSTTCBCCEEETTTEEEECCTTTSSSSCCC
T ss_pred CCCCcCCeEEEEEEECCEeceeEEEEEcCCCCcHHHHHHHHHhc-ccCCccccCCEEEEEECCCEEEcCCccCCCCCCCc
Confidence 45778999999999999999999999999999999999999998 66788899999999999999999998889999999
Q ss_pred cccCCCCCCCccccccCCCeEEEEecCCCCCCCccceEEecCCCCCCCCceEEEEEEcCHHHHHHhhcCCCCCCCCCCCC
Q 024387 176 SIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVP 255 (268)
Q Consensus 176 s~~g~~~~de~~~l~h~~~G~lsma~~gp~s~gSqFfItl~~~~~LDg~~~VFG~VveGmdvL~~I~~~~td~~~~P~~~ 255 (268)
++||..|++|++.++|.++|+|+|||.+|++++|||||++.+.+|||++|+|||+|++|||||++|++++++.+++|.++
T Consensus 89 si~g~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~~~~~P~~~ 168 (188)
T 3ich_A 89 SIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVESTKTDSRDKPLKD 168 (188)
T ss_dssp BTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSC
T ss_pred cccCCcccccccCcccCCCeEEEEccCCCCCcccEEEEECCCCcccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCeECCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEeeeEecC
Q 024387 256 CRIINSGELPL 266 (268)
Q Consensus 256 I~I~~cGvL~~ 266 (268)
|+|.+||+|+.
T Consensus 169 v~I~~~~~l~~ 179 (188)
T 3ich_A 169 VIIADCGKIEV 179 (188)
T ss_dssp EEEEEEEEEEE
T ss_pred EEEEEeEEEec
Confidence 99999999953
No 3
>2cmt_A Peptidyl-prolyl CIS-trans isomerase E; rotamase activity, rotamase, RNA-binding, cyclosporin, cyclophilin, beta-barrel; 1.50A {Schistosoma mansoni} PDB: 2ck1_A
Probab=100.00 E-value=1.1e-52 Score=359.16 Aligned_cols=166 Identities=63% Similarity=1.102 Sum_probs=157.4
Q ss_pred ccccceEEEEEEECCeeeeeEEEEEcCCCChHHHHHHHHHHhcCCCCcccCCCEEEEEEcCceeeeCCCcCCCCCCCccc
Q 024387 98 AKVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTAGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISI 177 (268)
Q Consensus 98 ~~~~~~v~fDi~i~~t~~GrIvIeL~~d~aP~tv~nF~~Lc~~G~kg~gY~g~~f~Rvi~~f~iqgGd~~~~~g~gg~s~ 177 (268)
+..+++|||||.+++|+.|+|+||||++.||+||+||++||+ +.+|++|+|+.||||+|+|||||||++.++|+|+.++
T Consensus 7 ~~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~-~~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~G~gg~si 85 (172)
T 2cmt_A 7 KRNLPRVFFDIRIGNGDAGRIVMELRSDIVPRTAENFRALCT-GERGFGYHNCCFHRVIPQFMCQGGDFVKGDGTGGKSI 85 (172)
T ss_dssp --CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHH-TTTSCSSTTCBEEEEETTTEEEECCTTTSSSSCCCBT
T ss_pred CCCCCEEEEEEEECCeecceEEEEEcCCCCCHHHHHHHHHhc-cCCCceECCCEEEEEECCCEEEcCCccCCCCCCCCcc
Confidence 456899999999999999999999999999999999999999 5568889999999999999999999988899999999
Q ss_pred cCCCCCCCccccccCCCeEEEEecCCCCCCCccceEEecCCCCCCCCceEEEEEEcCHHHHHHhhcCCCCCCCCCCCCeE
Q 024387 178 YGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCR 257 (268)
Q Consensus 178 ~g~~~~de~~~l~h~~~G~lsma~~gp~s~gSqFfItl~~~~~LDg~~~VFG~VveGmdvL~~I~~~~td~~~~P~~~I~ 257 (268)
|+..|++|++.++|.++|+|+||+.+|++++|||||++.+.+|||++|+|||+|++|||||++|+++++ .+++|.++|+
T Consensus 86 ~g~~f~dE~~~l~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tvFG~Vv~G~dvv~~I~~~~~-~~~~P~~~v~ 164 (172)
T 2cmt_A 86 YGRKFDDENFQLRHEGFGVLSMANSGPNTNGSQFFICTTKCDWLDGKHVVFGRVVDGQNVVKKMESVGS-KSGKVKEPVI 164 (172)
T ss_dssp TBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHGGGGCC-TTCCCSSCEE
T ss_pred CCCcccccccCcccCCceEEEEeeCCCCCcccEEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHhCCC-CCCCCCCCEE
Confidence 999999999999999999999999999999999999999999999999999999999999999999987 4689999999
Q ss_pred EEeeeEec
Q 024387 258 IINSGELP 265 (268)
Q Consensus 258 I~~cGvL~ 265 (268)
|.+||+|+
T Consensus 165 I~~~g~l~ 172 (172)
T 2cmt_A 165 ISRCGELI 172 (172)
T ss_dssp EEEEEEEC
T ss_pred EEEeEeEC
Confidence 99999984
No 4
>2z6w_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin D; HET: BMT MLE CIT; 0.96A {Homo sapiens} SCOP: b.62.1.1 PDB: 3rcg_A* 3r49_A* 3r54_A 3r56_A* 3r57_A* 3r59_A* 3rcf_A* 3r4g_A* 3rci_X* 3rck_X* 3rcl_A* 3rd9_X* 3rda_X* 3rdb_A* 3rdc_A* 2bit_X 2biu_X 3qyu_A 3k0m_A 1ak4_A* ...
Probab=100.00 E-value=1.4e-52 Score=356.27 Aligned_cols=164 Identities=66% Similarity=1.130 Sum_probs=157.4
Q ss_pred ccceEEEEEEECCeeeeeEEEEEcCCCChHHHHHHHHHHhcCCCCcccCCCEEEEEEcCceeeeCCCcCCCCCCCccccC
Q 024387 100 VTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTAGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYG 179 (268)
Q Consensus 100 ~~~~v~fDi~i~~t~~GrIvIeL~~d~aP~tv~nF~~Lc~~G~kg~gY~g~~f~Rvi~~f~iqgGd~~~~~g~gg~s~~g 179 (268)
.+++|||||+++++++|+|+||||++.||+||+||++||+ |.++|+|+|+.|||++|+|||||||++.++|+|+.++|+
T Consensus 2 ~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~-g~~g~~Y~g~~fhRvi~~f~iQgGd~~~~~g~gg~si~g 80 (165)
T 2z6w_A 2 GNPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCT-GEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYG 80 (165)
T ss_dssp CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHH-TTTSCCSTTCBEEEEETTTEEEECCTTTSSSSCCCBTTB
T ss_pred CCCEEEEEEEECCEeeeEEEEEEeCCCCcHHHHHHHHHhc-cCCCccCcCCEEEEEECCCEEEeCCccCCCCCCCCcccC
Confidence 3789999999999999999999999999999999999999 777889999999999999999999998889999999999
Q ss_pred CCCCCCccccccCCCeEEEEecCCCCCCCccceEEecCCCCCCCCceEEEEEEcCHHHHHHhhcCCCCCCCCCCCCeEEE
Q 024387 180 SSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRII 259 (268)
Q Consensus 180 ~~~~de~~~l~h~~~G~lsma~~gp~s~gSqFfItl~~~~~LDg~~~VFG~VveGmdvL~~I~~~~td~~~~P~~~I~I~ 259 (268)
..|++|++.++|.++|+|+||+.+|++++|||||++.+.++||++|+|||+|++|||||++|+++++ .+++|.++|+|.
T Consensus 81 ~~f~dE~~~l~h~~~G~lsmA~~gp~s~~SQFfI~~~~~~~Ldg~~~vFG~Vv~G~dvv~~I~~~~~-~~~~P~~~v~I~ 159 (165)
T 2z6w_A 81 SRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIEGMDVVKKIESFGS-KSGRTSKKIVIT 159 (165)
T ss_dssp SCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHTCC-TTSCCSSCEEEE
T ss_pred CcccCcccccccCCCCEEEEeeCCCCCcccEEEEEcCCCcccCCCeeEEEEEEcCHHHHHHHHhCCC-CCCCCCCcEEEE
Confidence 9999999999999999999999999999999999999999999999999999999999999999875 789999999999
Q ss_pred eeeEec
Q 024387 260 NSGELP 265 (268)
Q Consensus 260 ~cGvL~ 265 (268)
+||+|.
T Consensus 160 ~~g~l~ 165 (165)
T 2z6w_A 160 DCGQLS 165 (165)
T ss_dssp EEEECC
T ss_pred EeEEEC
Confidence 999984
No 5
>3pmp_A Cyclophilin A; peptidyl prolyl isomerase, isomerase-immunosuppressant compl; HET: BMT; 1.47A {Moniliophthora perniciosa} SCOP: b.62.1.1 PDB: 3o7t_A
Probab=100.00 E-value=1.6e-52 Score=355.65 Aligned_cols=163 Identities=56% Similarity=1.014 Sum_probs=156.9
Q ss_pred cceEEEEEEECCeeeeeEEEEEcCCCChHHHHHHHHHHhcCCCCcccCCCEEEEEEcCceeeeCCCcCCCCCCCccccCC
Q 024387 101 TTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTAGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGS 180 (268)
Q Consensus 101 ~~~v~fDi~i~~t~~GrIvIeL~~d~aP~tv~nF~~Lc~~G~kg~gY~g~~f~Rvi~~f~iqgGd~~~~~g~gg~s~~g~ 180 (268)
+++|||||.+++|+.|+|+||||++.||+||+||++||+ |.++++|+|+.|||++|+|||||||++.+++.|+.++|+.
T Consensus 2 ~p~vf~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~L~~-g~~g~~Y~g~~fhRvi~~f~iQgGd~~~~~g~gg~si~g~ 80 (164)
T 3pmp_A 2 MANVFFNISINDKPEGRIVFKLYDEAVPKTAKNFRELAT-GQHGFGYKDSIFHRVIPQFMLQGGDFTRHNGTGGKSIYGE 80 (164)
T ss_dssp CCCEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHH-TTTSCSSTTCBEEEEETTTEEEECCTTTSSSSCCCBTTBS
T ss_pred CCEEEEEEEECCEEeeEEEEEEeCCCCcHHHHHHHHHhc-ccCCCcccCCEEEEEECCCeEEeCCCCCCCCCCCcccCCc
Confidence 689999999999999999999999999999999999999 6678899999999999999999999888999999999999
Q ss_pred CCCCCccccccCCCeEEEEecCCCCCCCccceEEecCCCCCCCCceEEEEEEcCHHHHHHhhcCCCCCCCCCCCCeEEEe
Q 024387 181 SFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRIIN 260 (268)
Q Consensus 181 ~~~de~~~l~h~~~G~lsma~~gp~s~gSqFfItl~~~~~LDg~~~VFG~VveGmdvL~~I~~~~td~~~~P~~~I~I~~ 260 (268)
.|++|++.++|.++|+|+|||.+|++++|||||++.+.++||++|+|||+|++|||||++|++++++ +++|.++|+|.+
T Consensus 81 ~~~dE~~~l~h~~~G~lsma~~g~~t~~SQFfIt~~~~~~Ld~~~~vFG~Vv~G~~vv~~I~~~~~~-~~~P~~~v~I~~ 159 (164)
T 3pmp_A 81 KFADENFQVKHTKPGLLSMANAGANTNGSQFFITTVPTSWLDGKHVVFGEVIEGLDIVRKVEGKGSA-SGKTNATIKITD 159 (164)
T ss_dssp CBCCCCCCSCCCSTTEEEECBSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCT-TCCCSSCEEEEE
T ss_pred cccccccccCcCCCcEEEEeeCCCCCcccEEEEECCCChhhCCCccEEEEEeCCHHHHHHHHhCCCC-CCCcccCEEEEe
Confidence 9999999999999999999999999999999999999999999999999999999999999999886 789999999999
Q ss_pred eeEec
Q 024387 261 SGELP 265 (268)
Q Consensus 261 cGvL~ 265 (268)
||+|.
T Consensus 160 cg~l~ 164 (164)
T 3pmp_A 160 CGTVA 164 (164)
T ss_dssp EEEC-
T ss_pred CeEEC
Confidence 99984
No 6
>2wfi_A Peptidyl-prolyl CIS-trans isomerase G; phosphoprotein, PRE-mRNA splicing, alternative splicing, nucleus, rotamase, cyclosporin; HET: OCS; 0.75A {Homo sapiens} PDB: 2wfj_A* 2gw2_A
Probab=100.00 E-value=1.6e-52 Score=360.37 Aligned_cols=163 Identities=60% Similarity=1.014 Sum_probs=156.3
Q ss_pred ccceEEEEEEECCeeeeeEEEEEcCCCChHHHHHHHHHHhcCCCC---------cccCCCEEEEEEcCceeeeCCCcCCC
Q 024387 100 VTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTAGEKG---------YGYKGCSFHRIIKDFMIQGGDFTEGD 170 (268)
Q Consensus 100 ~~~~v~fDi~i~~t~~GrIvIeL~~d~aP~tv~nF~~Lc~~G~kg---------~gY~g~~f~Rvi~~f~iqgGd~~~~~ 170 (268)
.+++|||||++++++.|+|+||||++.||+||+||++||+ |.++ + |+|+.||||+|+|||||||++.++
T Consensus 8 ~~~~vf~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~-g~~g~~~~~~~~~~-Y~g~~FhRvi~~f~iQgGd~~~~~ 85 (179)
T 2wfi_A 8 QRPRCFFDIAINNQPAGRVVFELFSDVCPKTCENFRCLCT-GEKGTGKSTQKPLH-YKSCLFHRVVKDFMVQGGDFSEGN 85 (179)
T ss_dssp CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHH-CTTCBCTTTCSBSC-CTTCBEEEEETTTEEEECCTTTSS
T ss_pred CCCeEEEEEEECCccceEEEEEEcCCCCChHHHHHHHHhc-CCcCcccccccCCe-ECCCEEEEEECCCEEEcccccCCC
Confidence 4889999999999999999999999999999999999998 3332 3 999999999999999999998889
Q ss_pred CCCCccccCCCCCCCccccccCCCeEEEEecCCCCCCCccceEEecCCCCCCCCceEEEEEEcCHHHHHHhhcCCCCCCC
Q 024387 171 GTGGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTD 250 (268)
Q Consensus 171 g~gg~s~~g~~~~de~~~l~h~~~G~lsma~~gp~s~gSqFfItl~~~~~LDg~~~VFG~VveGmdvL~~I~~~~td~~~ 250 (268)
|+|+.++|+..|++|++.++|.++|+|+|||.+|++++||||||+.+++|||++|+|||+|++|||||++|++++++.++
T Consensus 86 g~gg~si~g~~f~dE~~~~~h~~~G~lsMAn~gp~tngSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~t~~~~ 165 (179)
T 2wfi_A 86 GRGGESIYGGFFEDESFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIENQKTDAAS 165 (179)
T ss_dssp SSCCCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTCCBCTTS
T ss_pred CCCCCcccCCcccccccCcCcCCCeEEEEEeCCCCCcceEEEEEcCCCcccCCCeeEEEEEeCCHHHHHHHHcCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCeEEEeeeEe
Q 024387 251 YPKVPCRIINSGEL 264 (268)
Q Consensus 251 ~P~~~I~I~~cGvL 264 (268)
+|.++|+|.+||+|
T Consensus 166 ~P~~~v~I~~~G~l 179 (179)
T 2wfi_A 166 KPFAEVRILSCGEL 179 (179)
T ss_dssp CBSSCEEEEEEEEC
T ss_pred CCCCCeEEEeCeeC
Confidence 99999999999987
No 7
>4fru_A Cyclophilin B, peptidyl-prolyl CIS-trans isomerase; cyclophilin-type ppiase, peptidyl-prolyl CIS-trans isomerase chaperone, foldase; HET: ME2 PEG; 1.10A {Equus caballus} PDB: 4frv_A* 3ich_A 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=9.1e-53 Score=363.49 Aligned_cols=169 Identities=63% Similarity=1.077 Sum_probs=162.2
Q ss_pred cccccceEEEEEEECCeeeeeEEEEEcCCCChHHHHHHHHHHhcCCCCcccCCCEEEEEEcCceeeeCCCcCCCCCCCcc
Q 024387 97 QAKVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTAGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGIS 176 (268)
Q Consensus 97 ~~~~~~~v~fDi~i~~t~~GrIvIeL~~d~aP~tv~nF~~Lc~~G~kg~gY~g~~f~Rvi~~f~iqgGd~~~~~g~gg~s 176 (268)
.|.++++|||||+++++++|+|+||||++.||+||+||++||+ +.+|+.|+|+.|||++|+|||||||++.+++.|+.+
T Consensus 8 ~p~~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~-~~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~s 86 (185)
T 4fru_A 8 GPKVTVKVYFDLRIGDEDIGRVVIGLFGKTVPKTVDNFVALAT-GEKGFGYKDSKFHRVIKDFMIQGGDFTRGDGTGGKS 86 (185)
T ss_dssp EEEEEEEEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHH-TTTSCCSTTCBCCEEETTTEEEECCTTTSSSSCCCB
T ss_pred CCCcCcEEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHHh-cCCCCeEcCCEEEEeeCCCeEEECCCCCCCCCCCcc
Confidence 4778999999999999999999999999999999999999999 445645999999999999999999999899999999
Q ss_pred ccCCCCCCCccccccCCCeEEEEecCCCCCCCccceEEecCCCCCCCCceEEEEEEcCHHHHHHhhcCCCCCCCCCCCCe
Q 024387 177 IYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPC 256 (268)
Q Consensus 177 ~~g~~~~de~~~l~h~~~G~lsma~~gp~s~gSqFfItl~~~~~LDg~~~VFG~VveGmdvL~~I~~~~td~~~~P~~~I 256 (268)
+|+..|++|++.++|.++|+|+|||.+|++++|||||++.+.+|||++|+|||+|++|||||++|++++++.+++|.++|
T Consensus 87 i~g~~f~de~~~~~h~~~G~lsma~~gp~t~~SQFfI~~~~~~~Ld~~~~vFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v 166 (185)
T 4fru_A 87 IYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVETTKTDGRDKPLKDV 166 (185)
T ss_dssp TTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCE
T ss_pred ccCCccCccccccCcCCCeEEEEeeCCCCCcceEEEEEeCCCcccCCCccEEEEEeCCHHHHHHHHhCCCCCCCcCCCCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeeeEecC
Q 024387 257 RIINSGELPL 266 (268)
Q Consensus 257 ~I~~cGvL~~ 266 (268)
+|.+||+|++
T Consensus 167 ~I~~~g~l~~ 176 (185)
T 4fru_A 167 TIADCGKIEV 176 (185)
T ss_dssp EEEEEEEEEE
T ss_pred EEEEceEEec
Confidence 9999999965
No 8
>2he9_A NK-tumor recognition protein; cyclosporin, isomerase, membrane, repeat, rotamase, peptidylprolyl isomerase, structural genomics; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.1e-52 Score=363.16 Aligned_cols=169 Identities=51% Similarity=0.907 Sum_probs=156.9
Q ss_pred ccccccceEEEEEEECCeeeeeEEEEEcCCCChHHHHHHHHHHhcCCC---------CcccCCCEEEEEEcCceeeeCCC
Q 024387 96 LQAKVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTAGEK---------GYGYKGCSFHRIIKDFMIQGGDF 166 (268)
Q Consensus 96 ~~~~~~~~v~fDi~i~~t~~GrIvIeL~~d~aP~tv~nF~~Lc~~G~k---------g~gY~g~~f~Rvi~~f~iqgGd~ 166 (268)
+....+++|||||+++++++|+|+||||++.||+||+||++||+ |.+ ++ |+|+.||||+|+|||||||+
T Consensus 14 ~~~~~~~~vf~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~-g~~g~~~~~~k~~~-Y~g~~FhRVi~~fmiQgGd~ 91 (192)
T 2he9_A 14 LVPRGSPQCHFDIEINREPVGRIMFQLFSDICPKTCKNFLCLCS-GEKGLGKTTGKKLC-YKGSTFHRVVKNFMIQGGDF 91 (192)
T ss_dssp -----CCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHH-CTTCBCTTTCSBSC-CTTCBEEEEETTTEEEECCT
T ss_pred ccccCCCeEEEEEEECCEecceEEEEEcCCCCchHHHHHHHHhc-CCCCcccccccCCe-ECCCEEEEEECCCEEEcCcc
Confidence 34567999999999999999999999999999999999999997 333 23 99999999999999999999
Q ss_pred cCCCCCCCccccCCCCCCCccccccCCCeEEEEecCCCCCCCccceEEecCCCCCCCCceEEEEEEcCHHHHHHhhcCCC
Q 024387 167 TEGDGTGGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVET 246 (268)
Q Consensus 167 ~~~~g~gg~s~~g~~~~de~~~l~h~~~G~lsma~~gp~s~gSqFfItl~~~~~LDg~~~VFG~VveGmdvL~~I~~~~t 246 (268)
+.++|+|+.++||..|++|++.++|.++|+|+|||.+|++++||||||+.+++|||++|+|||+|++|||||++|+++++
T Consensus 92 ~~~~G~gg~siyg~~f~dE~~~l~h~~~G~lsMAn~gp~tngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t 171 (192)
T 2he9_A 92 SEGNGKGGESIYGGYFKDENFILKHDRAFLLSMANRGKHTNGSQFFITTKPAPHLDGVHVVFGLVISGFEVIEQIENLKT 171 (192)
T ss_dssp TTSSSSCCCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCB
T ss_pred cCCCCCCCCcccCCcccCccccCCCCCCeEEEEEeCCCCCcceEEEEEcCCCcccCCCccEEEEEEeCHHHHHHHHcCCc
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCeEEEeeeEecC
Q 024387 247 SRTDYPKVPCRIINSGELPL 266 (268)
Q Consensus 247 d~~~~P~~~I~I~~cGvL~~ 266 (268)
+++++|.++|+|.+||+|..
T Consensus 172 ~~~~~P~~~v~I~~~g~l~~ 191 (192)
T 2he9_A 172 DAASRPYADVRVIDCGVLAT 191 (192)
T ss_dssp CTTSCBSSCEEEEEEEECC-
T ss_pred CCCCCCcCCeEEEEeEEEcc
Confidence 99999999999999999863
No 9
>1a58_A Cyclophilin; isomerase, ppiase; 1.95A {Brugia malayi} SCOP: b.62.1.1 PDB: 1a33_A 1c5f_A*
Probab=100.00 E-value=3.9e-52 Score=357.27 Aligned_cols=165 Identities=58% Similarity=0.972 Sum_probs=156.7
Q ss_pred ccceEEEEEEECCeeeeeEEEEEcCCCChHHHHHHHHHHhcCCCCc--------ccCCCEEEEEEcCceeeeCCCcCCCC
Q 024387 100 VTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTAGEKGY--------GYKGCSFHRIIKDFMIQGGDFTEGDG 171 (268)
Q Consensus 100 ~~~~v~fDi~i~~t~~GrIvIeL~~d~aP~tv~nF~~Lc~~G~kg~--------gY~g~~f~Rvi~~f~iqgGd~~~~~g 171 (268)
.+++|||||++++++.|+|+||||++.||+||+||++||+ +.++. .|+|+.||||+|+|||||||++.++|
T Consensus 5 ~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~-~~~g~~~~~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g 83 (177)
T 1a58_A 5 DRRRVFLDVTIDGNLAGRIVMELYNDIAPRTCNNFLMLCT-GMAGTGKISGKPLHYKGSTFHRVIKNFMIQGGDFTKGDG 83 (177)
T ss_dssp GCEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHH-CTTCBCTTTCSBCCCTTCBEEEEETTTEEEECCCSSSSS
T ss_pred CCcEEEEEEEECCEeceeEEEEEcCCCCchHHHHHHHHhc-CCcCcccccCCcceeCCCEEEEEECCCEEEeCCccCCCC
Confidence 5789999999999999999999999999999999999999 32221 29999999999999999999988999
Q ss_pred CCCccccCCCCCCCccccccCCCeEEEEecCCCCCCCccceEEecCCCCCCCCceEEEEEEcCHHHHHHhhcCCCCCCCC
Q 024387 172 TGGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDY 251 (268)
Q Consensus 172 ~gg~s~~g~~~~de~~~l~h~~~G~lsma~~gp~s~gSqFfItl~~~~~LDg~~~VFG~VveGmdvL~~I~~~~td~~~~ 251 (268)
+|+.++|+..|++|++.++|.++|+|+|||.+|++++||||||+.+.+|||++|+|||+|++|||||++|++++++.+++
T Consensus 84 ~gg~si~g~~f~dE~~~~~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~~I~~~~~~~~~~ 163 (177)
T 1a58_A 84 TGGESIYGGMFDDEEFVMKHDEPFVVSMANKGPNTNGSQFFITTTPAPHLNNIHVVFGKVVSGQEVVTKIEYLKTNSKNR 163 (177)
T ss_dssp SCCCCTTSSCBCCCCCCSCCCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSC
T ss_pred CCCCcccCCcccCcccCcccCCCeEEEEeeCCCCCceeEEEEECCCCCccCCCEEEEEEEEcCHHHHHHHHhCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCeEEEeeeEec
Q 024387 252 PKVPCRIINSGELP 265 (268)
Q Consensus 252 P~~~I~I~~cGvL~ 265 (268)
|.++|+|.+||+|.
T Consensus 164 P~~~v~I~~~G~l~ 177 (177)
T 1a58_A 164 PLADVVILNCGELV 177 (177)
T ss_dssp BSSCEEEEEEEEEC
T ss_pred CCCCeEEEEeEEEC
Confidence 99999999999983
No 10
>2r99_A Peptidyl-prolyl CIS-trans isomerase E; CIS-trans isomerization, structural genomics consortium, SGC, alternative splicing, mRNA processing; 1.61A {Homo sapiens} SCOP: b.62.1.1 PDB: 3uch_A 1zmf_A
Probab=100.00 E-value=4.3e-52 Score=355.84 Aligned_cols=165 Identities=60% Similarity=1.042 Sum_probs=157.1
Q ss_pred cccceEEEEEEECCeeeeeEEEEEcCCCChHHHHHHHHHHhcCCCCcccCCCEEEEEEcCceeeeCCCcCCCCCCCcccc
Q 024387 99 KVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTAGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIY 178 (268)
Q Consensus 99 ~~~~~v~fDi~i~~t~~GrIvIeL~~d~aP~tv~nF~~Lc~~G~kg~gY~g~~f~Rvi~~f~iqgGd~~~~~g~gg~s~~ 178 (268)
..+++|||||.+++|+.|+|+||||++.||+||+||++||+ |.+|++|+|+.||||+|+|||||||++.++|+|+.++|
T Consensus 9 ~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~-g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~ 87 (173)
T 2r99_A 9 RSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCT-HEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIY 87 (173)
T ss_dssp -CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHH-TTTSCCSTTCBEEEEETTTEEEECCTTTSSSSCCCBTT
T ss_pred cCCCEEEEEEEECCccceeEEEEECCCCCcHHHHHHHHHhc-ccCCceecCCEEEEeeCCCEEEeCCcCCCCCCCCCccC
Confidence 35789999999999999999999999999999999999998 56787899999999999999999999988999999999
Q ss_pred CCCCCCCccccccCCCeEEEEecCCCCCCCccceEEecCCCCCCCCceEEEEEEcCHHHHHHhhcCCCCCCCCCCCCeEE
Q 024387 179 GSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRI 258 (268)
Q Consensus 179 g~~~~de~~~l~h~~~G~lsma~~gp~s~gSqFfItl~~~~~LDg~~~VFG~VveGmdvL~~I~~~~td~~~~P~~~I~I 258 (268)
+..|++|++.++|.++|+|+|||.+|++++|||||++.+.+|||++|+|||+|++|||||++|++++++ +++|.++|+|
T Consensus 88 g~~f~dE~~~l~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~-~~~P~~~v~I 166 (173)
T 2r99_A 88 GKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEAQGSK-DGKPKQKVII 166 (173)
T ss_dssp BSCBCCCCCCSCCCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCT-TCCCSSCEEE
T ss_pred CCcccCcccCcccCCCcEEEEccCCCCCcccEEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHhCCCC-CCCCCCCeEE
Confidence 999999999999999999999999999999999999999999999999999999999999999999775 5899999999
Q ss_pred EeeeEec
Q 024387 259 INSGELP 265 (268)
Q Consensus 259 ~~cGvL~ 265 (268)
.+||+|.
T Consensus 167 ~~cG~l~ 173 (173)
T 2r99_A 167 ADCGEYV 173 (173)
T ss_dssp EEEEECC
T ss_pred EEeeeEC
Confidence 9999984
No 11
>2igv_A Peptidyl-prolyl CIS-trans isomerase 3; rotamase; 1.67A {Caenorhabditis elegans} SCOP: b.62.1.1 PDB: 1e3b_A 1e8k_A 1dyw_A 2igw_A 2hqj_A
Probab=100.00 E-value=3.6e-52 Score=356.28 Aligned_cols=164 Identities=66% Similarity=1.165 Sum_probs=155.5
Q ss_pred ccceEEEEEEECCeeeeeEEEEEcCCCChHHHHHHHHHHhcCCCCcc-------cCCCEEEEEEcCceeeeCCCcCCCCC
Q 024387 100 VTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTAGEKGYG-------YKGCSFHRIIKDFMIQGGDFTEGDGT 172 (268)
Q Consensus 100 ~~~~v~fDi~i~~t~~GrIvIeL~~d~aP~tv~nF~~Lc~~G~kg~g-------Y~g~~f~Rvi~~f~iqgGd~~~~~g~ 172 (268)
.+++|||||++++++.|+|+||||++.||+||+||++||+ +.+|++ |+|+.||||+|+|||||||++.++|+
T Consensus 2 ~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~-~~~g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G~ 80 (173)
T 2igv_A 2 SRSKVFFDITIGGKASGRIVMELYDDVVPKTAGNFRALCT-GENGIGKSGKPLHFKGSKFHRIIPNFMIQGGDFTRGNGT 80 (173)
T ss_dssp CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHH-TTTCBCTTSSBSCCTTCBCCEEETTTEEEECCTTTSSSS
T ss_pred CCCEEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHhc-CCCCCCccCccceECCCEEEEEECCCEEEcCCCCCCCCC
Confidence 4789999999999999999999999999999999999999 444532 99999999999999999999888999
Q ss_pred CCccccCCCCCCCccccccCCCeEEEEecCCCCCCCccceEEecCCCCCCCCceEEEEEEcCHHHHHHhhcCCCCCCCCC
Q 024387 173 GGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYP 252 (268)
Q Consensus 173 gg~s~~g~~~~de~~~l~h~~~G~lsma~~gp~s~gSqFfItl~~~~~LDg~~~VFG~VveGmdvL~~I~~~~td~~~~P 252 (268)
|+.++|+..|++|++.++|.++|+|+|||.+|++++|||||++.+.+|||++|+|||+|++|||||++|+++++ .+++|
T Consensus 81 gg~siyg~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~vFG~Vv~G~dvv~~I~~~~t-~~~~P 159 (173)
T 2igv_A 81 GGESIYGEKFPDENFKEKHTGPGVLSMANAGPNTNGSQFFLCTVKTEWLDGKHVVFGRVVEGLDVVKAVESNGS-QSGKP 159 (173)
T ss_dssp CCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCC-TTSCC
T ss_pred CCCccCCCcccCcccccCCCCCeEEEEeeCCCCCcceEEEEEcCCccccCCCeeEEEEEecCHHHHHHHHhCCC-CCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988 56899
Q ss_pred CCCeEEEeeeEec
Q 024387 253 KVPCRIINSGELP 265 (268)
Q Consensus 253 ~~~I~I~~cGvL~ 265 (268)
.++|+|.+||+|+
T Consensus 160 ~~~v~I~~~g~l~ 172 (173)
T 2igv_A 160 VKDCMIADCGQLK 172 (173)
T ss_dssp SSCEEEEEEEEEC
T ss_pred CCCEEEEEeEEEc
Confidence 9999999999996
No 12
>3rdd_A Peptidyl-prolyl CIS-trans isomerase A; beta barrel, cytosolic, inhibito isomerase-isomerase inhibitor complex; HET: EA4; 2.14A {Homo sapiens}
Probab=100.00 E-value=5.2e-52 Score=358.52 Aligned_cols=171 Identities=60% Similarity=1.061 Sum_probs=158.0
Q ss_pred cccccccccceEEEEEEECCeeeeeEEEEEcCCCChHHHHHHHHHHhcCCCCcccCCCEEEEEEcCceeeeCCCcCCCCC
Q 024387 93 DVELQAKVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTAGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGT 172 (268)
Q Consensus 93 ~~~~~~~~~~~v~fDi~i~~t~~GrIvIeL~~d~aP~tv~nF~~Lc~~G~kg~gY~g~~f~Rvi~~f~iqgGd~~~~~g~ 172 (268)
....++..+++||||++++++++|+|+||||++.||+||+||++||+ +.+|++|+|+.||||+|+|||||||++.+++.
T Consensus 14 ~~~~~~~~~p~v~~di~i~~~~~G~I~ieL~~~~aP~t~~NF~~L~~-~~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~ 92 (184)
T 3rdd_A 14 NLYFQGMVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALST-GEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGT 92 (184)
T ss_dssp -------CCCEEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHH-TTTSCSSTTCBCCEEETTTEEEECCTTTSSSS
T ss_pred CCCcccCCCCEEEEEEeECCEeeeEEEEEEeCCCCcHHHHHHHHHhc-cCcCcccCCCEEEEccCCcEEEeCCCCCCCCC
Confidence 33456677999999999999999999999999999999999999999 55688899999999999999999999889999
Q ss_pred CCccccCCCCCCCccccccCCCeEEEEecCCCCCCCccceEEecCCCCCCCCceEEEEEEcCHHHHHHhhcCCCCCCCCC
Q 024387 173 GGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYP 252 (268)
Q Consensus 173 gg~s~~g~~~~de~~~l~h~~~G~lsma~~gp~s~gSqFfItl~~~~~LDg~~~VFG~VveGmdvL~~I~~~~td~~~~P 252 (268)
|+.++|+..|++|++.++|.++|+|+||+.+|++++|||||++.+.++||++|+|||+|++|||||++|+++++ ++++|
T Consensus 93 gg~si~g~~~~de~~~l~h~~~G~lsmA~~gp~s~gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~-~~g~P 171 (184)
T 3rdd_A 93 GGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGS-RNGKT 171 (184)
T ss_dssp CCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCC-TTSCC
T ss_pred CCcccCCCcccCcccccccCCCcEEEEEeCCCCCcccEEEEEeCCchhhCCCceEEEEEecCHHHHHHHHhcCC-CCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999876 57899
Q ss_pred CCCeEEEeeeEec
Q 024387 253 KVPCRIINSGELP 265 (268)
Q Consensus 253 ~~~I~I~~cGvL~ 265 (268)
.++|+|.+||+|+
T Consensus 172 ~~~v~I~~cG~l~ 184 (184)
T 3rdd_A 172 SKKITIADCGQLE 184 (184)
T ss_dssp SSCEEEEEEEECC
T ss_pred cCCeEEEeCeEEC
Confidence 9999999999985
No 13
>1qng_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, cyclophilin-cyclosporin complex, immunosuppressant, cyclophilin; HET: BMT; 2.1A {Plasmodium falciparum} SCOP: b.62.1.1 PDB: 1qnh_A*
Probab=100.00 E-value=4.1e-52 Score=355.06 Aligned_cols=162 Identities=60% Similarity=1.037 Sum_probs=154.8
Q ss_pred ccceEEEEEEECCeeeeeEEEEEcCCCChHHHHHHHHHHhcCCCCcc-------cCCCEEEEEEcCceeeeCCCcCCCCC
Q 024387 100 VTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTAGEKGYG-------YKGCSFHRIIKDFMIQGGDFTEGDGT 172 (268)
Q Consensus 100 ~~~~v~fDi~i~~t~~GrIvIeL~~d~aP~tv~nF~~Lc~~G~kg~g-------Y~g~~f~Rvi~~f~iqgGd~~~~~g~ 172 (268)
.+++|||||++++++.|+|+||||++.||+||+||++||+ +. +++ |+|+.||||+|+|||||||++.++|+
T Consensus 2 ~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~-~~-g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~ 79 (170)
T 1qng_A 2 KRSKVFFDISIDNSNAGRIIFELFSDITPRTCENFRALCT-GE-KIGSRGKNLHYKNSIFHRIIPQFMCQGGDITNGNGS 79 (170)
T ss_dssp CSCEEEEEEEESSSEEEEEEEEECTTTCHHHHHHHHHHHH-TC-EECTTSSEECCTTCBCCEEETTTEEEECCTTTSSSS
T ss_pred CCCEEEEEEeECCEeceeEEEEEcCCCCCHHHHHHHHHhc-cC-CcCccCccceECCCEEEEEECCCEEEcCCccCCCCC
Confidence 4789999999999999999999999999999999999998 32 444 99999999999999999999888999
Q ss_pred CCccccCCCCCCCccccccCCCeEEEEecCCCCCCCccceEEecCCCCCCCCceEEEEEEcCHHHHHHhhcCCCCCCCCC
Q 024387 173 GGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYP 252 (268)
Q Consensus 173 gg~s~~g~~~~de~~~l~h~~~G~lsma~~gp~s~gSqFfItl~~~~~LDg~~~VFG~VveGmdvL~~I~~~~td~~~~P 252 (268)
|+.++|++.|++|++.++|.++|+|+||+.+|++++||||||+.+.+|||++|+|||+|++|||||++|+++++ ++++|
T Consensus 80 gg~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~Ldg~~~vFG~Vv~G~dvv~~I~~~~t-~~~~P 158 (170)
T 1qng_A 80 GGESIYGRSFTDENFNMKHDQPGLLSMANAGPNTNSSQFFITLVPCPWLDGKHVVFGKVIEGMNVVREMEKEGA-KSGYV 158 (170)
T ss_dssp CCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCC-TTCCC
T ss_pred CCccccCCcccccccccccCCCCEEEEeecCCCCcccEEEEECCCCcccCCCeeEEEEEECCHHHHHHHHhCCC-CCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999 78999
Q ss_pred CCCeEEEeeeEe
Q 024387 253 KVPCRIINSGEL 264 (268)
Q Consensus 253 ~~~I~I~~cGvL 264 (268)
.++|+|.+||+|
T Consensus 159 ~~~v~I~~cG~l 170 (170)
T 1qng_A 159 KRSVVITDCGEL 170 (170)
T ss_dssp SSCEEEEEEEEC
T ss_pred CCCeEEEeceeC
Confidence 999999999997
No 14
>1mzw_A Cyclophilin H, U-snRNP-ASSOCIATED cyclophilin; cyclophilin, peptidyl-prolyl-CIS/trans isomerase, spliceosome, U4/U6-60K protein, WD protein; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1qoi_A
Probab=100.00 E-value=3.7e-52 Score=357.43 Aligned_cols=165 Identities=59% Similarity=1.032 Sum_probs=156.8
Q ss_pred ccceEEEEEEECCeeeeeEEEEEcCCCChHHHHHHHHHHhcCC----CCcccCCCEEEEEEcCceeeeCCCcCCCCCCCc
Q 024387 100 VTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTAGE----KGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGI 175 (268)
Q Consensus 100 ~~~~v~fDi~i~~t~~GrIvIeL~~d~aP~tv~nF~~Lc~~G~----kg~gY~g~~f~Rvi~~f~iqgGd~~~~~g~gg~ 175 (268)
.+++|||||.+++++.|+|+||||++.||+||+||++||+.++ +.++|+|+.||||+|+|||||||++.++|+|+.
T Consensus 9 ~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G~gg~ 88 (177)
T 1mzw_A 9 VNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEFRKDGVPIGYKGSTFHRVIKDFMIQGGDFVNGDGTGVA 88 (177)
T ss_dssp CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCEETTEECSSTTCBCCEEETTTEEEECCTTTSSSCCCC
T ss_pred CCCEEEEEEEECCeeceeEEEEEcCCCCcHHHHHHHHHHhcccCCcCccceECCCEEEEEECCCEEEcCCcccCCCCCCC
Confidence 4789999999999999999999999999999999999999543 113499999999999999999999888999999
Q ss_pred cccCCCCCCCccccccCCCeEEEEecCCCCCCCccceEEecCCCCCCCCceEEEEEEcCHHHHHHhhcCCCCCCCCCCCC
Q 024387 176 SIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVP 255 (268)
Q Consensus 176 s~~g~~~~de~~~l~h~~~G~lsma~~gp~s~gSqFfItl~~~~~LDg~~~VFG~VveGmdvL~~I~~~~td~~~~P~~~ 255 (268)
++|++.|++|++.++|+++|+||||+.+|++++|||||++.+.++||++|+|||+|++|||||++|++++++++++|.++
T Consensus 89 si~g~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~~I~~~~t~~~~~P~~~ 168 (177)
T 1mzw_A 89 SIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGPNNKPKLP 168 (177)
T ss_dssp CTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCGGGCBSSC
T ss_pred ccCCCcccCcccccccCCCCEEEEccCCCCCcceEEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEeeeEe
Q 024387 256 CRIINSGEL 264 (268)
Q Consensus 256 I~I~~cGvL 264 (268)
|+|.+||+|
T Consensus 169 v~I~~cG~l 177 (177)
T 1mzw_A 169 VVISQCGEM 177 (177)
T ss_dssp EEEEEEEEC
T ss_pred EEEEeceeC
Confidence 999999997
No 15
>2poy_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, isomerase, S genomics, structural genomics consortium; HET: BMT; 1.80A {Cryptosporidium parvum iowa II} PDB: 2plu_A*
Probab=100.00 E-value=1.4e-51 Score=356.23 Aligned_cols=164 Identities=63% Similarity=1.046 Sum_probs=154.5
Q ss_pred ccccceEEEEEEECCeeeeeEEEEEcCCCChHHHHHHHHHHhcCCCCcc-------cCCCEEEEEEcCceeeeCCCcCCC
Q 024387 98 AKVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTAGEKGYG-------YKGCSFHRIIKDFMIQGGDFTEGD 170 (268)
Q Consensus 98 ~~~~~~v~fDi~i~~t~~GrIvIeL~~d~aP~tv~nF~~Lc~~G~kg~g-------Y~g~~f~Rvi~~f~iqgGd~~~~~ 170 (268)
...+++|||||.+++++.|+|+||||++.||+||+||++||+ +.+|++ |+|+.||||+|+|||||||++.++
T Consensus 16 ~~~~~~v~~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~-g~~g~~~~~~~~~Y~g~~FhRVi~~f~iQgGd~~~~~ 94 (186)
T 2poy_A 16 FQGNPVVYFDISIGQTPAGRITMELFADKVPITAENFRALCT-GEKGMGQSGKPLCYTGSFFHRIIPQFMIQGGDFTRGD 94 (186)
T ss_dssp --CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHH-TTTCBCTTSSBSCCTTCBCCEEETTTEEEECCTTTSS
T ss_pred cCCCCEEEEEEeECCEecccEEEEEeCCCCcHHHHHHHHHhc-ccCCccccCccceECCCEEEEEeCCCEEEeCCCCCCC
Confidence 456899999999999999999999999999999999999998 556665 999999999999999999998889
Q ss_pred CCCCccccCCCCCCCccccccCCCeEEEEecCCCCCCCccceEEecCCCCCCCCceEEEEEEcCHHHHHHhhcCCCCCCC
Q 024387 171 GTGGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTD 250 (268)
Q Consensus 171 g~gg~s~~g~~~~de~~~l~h~~~G~lsma~~gp~s~gSqFfItl~~~~~LDg~~~VFG~VveGmdvL~~I~~~~td~~~ 250 (268)
|+|+.++|++.|++|++.++|.++|+|+||+.+||+++|||||++.+.++||++|+|||+|++|||||++|+++++ .++
T Consensus 95 G~gg~si~g~~f~dE~~~l~h~~~G~lsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t-~~~ 173 (186)
T 2poy_A 95 GTGGESIYGSKFRDENFVYTHDAPFLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGKVLEGMEVVKSIEKCGS-QNG 173 (186)
T ss_dssp SSCCCCTTC-CBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHTCC-TTS
T ss_pred CCCCCccCCCcccCcccccccCCCcEEEEeeCCCCCcccEEEEECCCCcccCCCeeEEEEEecCHHHHHHHHhCCC-CCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999988 678
Q ss_pred CCCCCeEEEeeeE
Q 024387 251 YPKVPCRIINSGE 263 (268)
Q Consensus 251 ~P~~~I~I~~cGv 263 (268)
+|.++|+|.+||+
T Consensus 174 ~P~~~v~I~~cG~ 186 (186)
T 2poy_A 174 KPTKSVCITASGV 186 (186)
T ss_dssp CCSSCEEEEEEEC
T ss_pred CCCCCEEEEeCCC
Confidence 9999999999996
No 16
>3k2c_A Peptidyl-prolyl CIS-trans isomerase; ssgcid, NIH, niaid, SBRI, UW, decode, cytoplasm, rotamase, structural genomics; HET: PG5; 1.95A {Encephalitozoon cuniculi}
Probab=100.00 E-value=4.8e-51 Score=354.86 Aligned_cols=166 Identities=54% Similarity=0.898 Sum_probs=158.1
Q ss_pred cccceEEEEEEECCeeeeeEEEEEcCCCChHHHHHHHHHHhcCCCCcccCCCEEEEEEcCceeeeCCCcCCCCCCCcccc
Q 024387 99 KVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTAGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIY 178 (268)
Q Consensus 99 ~~~~~v~fDi~i~~t~~GrIvIeL~~d~aP~tv~nF~~Lc~~G~kg~gY~g~~f~Rvi~~f~iqgGd~~~~~g~gg~s~~ 178 (268)
+.+++|||||.+++++.|+|+||||++.||+||+||++||+ +.++++|+|+.||||+|+|||||||++.+++.|+.++|
T Consensus 25 ~~~p~v~~di~i~~t~~G~I~ieL~~~~aP~tv~NF~~L~~-g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~ 103 (193)
T 3k2c_A 25 EASGNVYFDVYANEESLGRIVMKLEDDIVPKTAKNFRTLCE-RPKGEGYKGSTFHRIIPGFMVQGGDYTAHNGTGGRSIY 103 (193)
T ss_dssp -CTTCEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHH-SCTTSSSTTCBEEEEETTTEEEECCTTTSSSSCCCCTT
T ss_pred cCCCEEEEEEeECCEEeeEEEEEEcCCCChHHHHHHHHHhc-cccCCcccCCEEEEEeCCCEEEeCCCCCCCCcCCcccC
Confidence 45789999999999999999999999999999999999999 56788899999999999999999999889999999999
Q ss_pred CCCCCCCccccccCCCeEEEEecCCCCCCCccceEEecCCCCCCCCceEEEEEEcCHHHHHHhhcCCCCCCCCCC--CCe
Q 024387 179 GSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPK--VPC 256 (268)
Q Consensus 179 g~~~~de~~~l~h~~~G~lsma~~gp~s~gSqFfItl~~~~~LDg~~~VFG~VveGmdvL~~I~~~~td~~~~P~--~~I 256 (268)
+..|++|++.++|.++|+|+||+.+|++++|||||++.+.++||++|+|||+|++|||||++|++++++ +++|. ++|
T Consensus 104 g~~f~dE~~~l~h~~~G~lsmAn~gp~t~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~-~g~P~~~~~v 182 (193)
T 3k2c_A 104 GEKFPDENFELKHTKEGILSMANCGAHTNGSQFFITLGKTQWLDEKHVVFGEVVEGMDVVHKIAKYGSE-SGQVKKGYRI 182 (193)
T ss_dssp SSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCT-TCCCCTTCCE
T ss_pred CCcccccccccccCCCcEEEEEeCCCCCCccEEEEECCCCcccCCCccEEEEEeCCHHHHHHHHhcCCC-CCcCccCccE
Confidence 999999999999999999999999999999999999999999999999999999999999999999887 67999 999
Q ss_pred EEEeeeEecC
Q 024387 257 RIINSGELPL 266 (268)
Q Consensus 257 ~I~~cGvL~~ 266 (268)
+|.+||+|+.
T Consensus 183 ~I~~cG~l~~ 192 (193)
T 3k2c_A 183 EIRDCGVLGS 192 (193)
T ss_dssp EEEEEEECC-
T ss_pred EEEEceEeCC
Confidence 9999999974
No 17
>2c3b_A Ppiase, cyclophilin; isomerase, 3D domain swapping, misfolding, Asp F 11, allergen, rotamase; 1.85A {Aspergillus fumigatus} SCOP: b.62.1.1
Probab=100.00 E-value=2.4e-51 Score=350.92 Aligned_cols=163 Identities=57% Similarity=0.979 Sum_probs=125.0
Q ss_pred ccceEEEEEEEC--Ce---eeeeEEEEEcCCCChHHHHHHHHHHhcCCCCcccCCCEEEEEEcCceeeeCCCcCCCCCCC
Q 024387 100 VTTKVFFDVDIG--GK---PAGRIVMGLFGDVVPKTAENFRALCTAGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGG 174 (268)
Q Consensus 100 ~~~~v~fDi~i~--~t---~~GrIvIeL~~d~aP~tv~nF~~Lc~~G~kg~gY~g~~f~Rvi~~f~iqgGd~~~~~g~gg 174 (268)
+| +|||||+++ ++ ++|+|+||||++.||+||+||++||+ |.+|++|+|+.||||+|+|||||||+..++|+|+
T Consensus 2 it-~vf~di~i~~~~~~~T~~G~i~ieL~~~~aP~t~~NF~~L~~-g~~g~~Y~g~~fhRvi~~f~iQgGd~~~~~g~gg 79 (172)
T 2c3b_A 2 MS-QVFFDVEYAPVGTAETKVGRIVFNLFDKDVPKTAKNFRELCK-RPAGEGYRESTFHRIIPNFMIQGGDFTRGNGTGG 79 (172)
T ss_dssp CC-CEEEEEEECCTTCSCCEEEEEEEEECTTTSHHHHHHHHHHHH-SCTTTSSTTCBCCEEETTTEEEECC---------
T ss_pred ce-EEEEEEEeCCCCceecccccEEEEEcCCCCcHHHHHHHHHhc-cCCCcccCCCEEEEEeCCCEEEeCCcCCCCCCCC
Confidence 46 999999998 64 45999999999999999999999999 6678889999999999999999999877899999
Q ss_pred ccccCCCCCCCccccccCCCeEEEEecCCCCCCCccceEEecCCCCCCCCceEEEEEEc--CHHHHHHhhcCCCCCCC-C
Q 024387 175 ISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVID--GMDVVRKLESVETSRTD-Y 251 (268)
Q Consensus 175 ~s~~g~~~~de~~~l~h~~~G~lsma~~gp~s~gSqFfItl~~~~~LDg~~~VFG~Vve--GmdvL~~I~~~~td~~~-~ 251 (268)
.++|++.|++|+..++|.++|+|+|||.+|++++|||||++.+.++||++|+|||+|++ |||||++|++++++..+ +
T Consensus 80 ~si~g~~f~dE~~~~~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tvFG~Vv~~~G~dvv~~I~~~~t~~~~~~ 159 (172)
T 2c3b_A 80 RSIYGDKFADENFSRKHDKKGILSMANAGPNTNGSQFFITTAVTSWLDGKHVVFGEVADEKSYSVVKEIEALGSSSGSVR 159 (172)
T ss_dssp -------------CHHHHHTCEEEEC---------CEEEECSCCTTCCSCCEEEEEECSHHHHHHHHHHHTTCCTTSCCC
T ss_pred cccCCCcccCcccccccCCCeEEEEeeCCCCCcccEEEEECCCCCccCCCeeEEEEEEecCCHHHHHHHHhCCCCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999 99999999999998765 9
Q ss_pred CCCCeEEEeeeEe
Q 024387 252 PKVPCRIINSGEL 264 (268)
Q Consensus 252 P~~~I~I~~cGvL 264 (268)
|.++|+|.+||+|
T Consensus 160 P~~~v~I~~cG~l 172 (172)
T 2c3b_A 160 SNTRPKIVNCGEL 172 (172)
T ss_dssp SSSCCEEEEEEEC
T ss_pred CCCCeEEEeCeeC
Confidence 9999999999997
No 18
>1z81_A Cyclophilin; structural genomics, structural genomics consortium, SGC, isomerase; 2.80A {Plasmodium yoelii yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=1e-49 Score=354.27 Aligned_cols=164 Identities=49% Similarity=0.921 Sum_probs=156.1
Q ss_pred ccceEEEEEEECCeeeeeEEEEEcCCCChHHHHHHHHHHhcCCCC-----cccCCCEEEEEEcCceeeeCCCcCCCCCCC
Q 024387 100 VTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTAGEKG-----YGYKGCSFHRIIKDFMIQGGDFTEGDGTGG 174 (268)
Q Consensus 100 ~~~~v~fDi~i~~t~~GrIvIeL~~d~aP~tv~nF~~Lc~~G~kg-----~gY~g~~f~Rvi~~f~iqgGd~~~~~g~gg 174 (268)
.+++||||+.+++++.|+|+||||.+.||+||+||++||+.++ + +.|+|+.||||+|+|||||||++.++|+|+
T Consensus 58 ~~~~V~~disi~~t~~G~I~ieL~~d~aP~tv~NF~~L~~~~~-g~~g~~~~Y~gt~FHRVi~~FmiQgGD~~~g~G~Gg 136 (229)
T 1z81_A 58 SNPVVFMDINLGNNFLGKFKFELFQNIVPKTSENFRQFCTGEY-KVNNLPVGYKNTIFHRVIKEFMIQGGDFINHNGSGS 136 (229)
T ss_dssp TCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCC-BSSSSBCSSTTEECCEEETTTEEEECCTTTSSSCCC
T ss_pred CCcEEEEEEeECCeecccEEEEEcCCCCCHHHHHHHHHhhCCC-CCcCCCceECCCEEEEEeCCCEEEcCCCcCCCCCCC
Confidence 4789999999999999999999999999999999999999542 2 239999999999999999999988999999
Q ss_pred ccccCCCCCCCccccccCCCeEEEEecCCCCCCCccceEEecCCCCCCCCceEEEEEE--cCHHHHHHhhcCCCCCC-CC
Q 024387 175 ISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVI--DGMDVVRKLESVETSRT-DY 251 (268)
Q Consensus 175 ~s~~g~~~~de~~~l~h~~~G~lsma~~gp~s~gSqFfItl~~~~~LDg~~~VFG~Vv--eGmdvL~~I~~~~td~~-~~ 251 (268)
.++|+..|++|++.++|.++|+|+|||.+|++++||||||+.+.++||++|+|||+|+ +|||||++|++++++.+ ++
T Consensus 137 ~siyg~~f~dE~~~l~h~~~G~LsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~~eGmdVv~~I~~~~t~~~~~~ 216 (229)
T 1z81_A 137 LSIYGEKFDDENFDIKHDKEGLLSMANSGPNTNGCQFFITTKKCEWLDGKNVVFGRIIDNDSLLLLKKIENVSVTPYIYK 216 (229)
T ss_dssp CBTTBSCCCCCCCCSCCCSTTEEEECCSSSSCCCSCEEEESSCCGGGBTTBCEEEEECSHHHHHHHHHHHHSCBCTTTCC
T ss_pred CccCCCcccccccccccCCCcEEEeccCCCCCcccEEEEECCCCcccCCCeeEEEEEEecCcHHHHHHHHhCCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999 99999999999999987 99
Q ss_pred CCCCeEEEeeeEe
Q 024387 252 PKVPCRIINSGEL 264 (268)
Q Consensus 252 P~~~I~I~~cGvL 264 (268)
|.++|+|.+||+|
T Consensus 217 P~~~V~I~~cG~l 229 (229)
T 1z81_A 217 PKIPINVVECGEL 229 (229)
T ss_dssp BSSCEEEEEEEEC
T ss_pred CCCCeEEEeCeeC
Confidence 9999999999997
No 19
>2ose_A Probable peptidyl-prolyl CIS-trans isomerase; cyclophilin; 2.04A {Mimivirus}
Probab=100.00 E-value=5.9e-49 Score=350.77 Aligned_cols=164 Identities=27% Similarity=0.483 Sum_probs=149.9
Q ss_pred ccceEEEEEEECCeeeeeEEEEEcCCCChHHHHHHHHHHhcCC-----------C----C--cccCCCEEEEEEcCceee
Q 024387 100 VTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTAGE-----------K----G--YGYKGCSFHRIIKDFMIQ 162 (268)
Q Consensus 100 ~~~~v~fDi~i~~t~~GrIvIeL~~d~aP~tv~nF~~Lc~~G~-----------k----g--~gY~g~~f~Rvi~~f~iq 162 (268)
.+++|||||.+++|+.|+|+||||.+.||+||+||++||+ |. + | |+|+|+.||||+++||||
T Consensus 13 ~~p~v~~di~i~~t~~G~I~ieL~~d~aP~tv~NF~~L~~-g~~~~~~p~~~~~~~~~~G~~~~Y~gt~FHRVi~~FmiQ 91 (234)
T 2ose_A 13 KNPRVYMDIVLNNEIIGRLQIKLFRDAFPAGVENFVQLTN-GKTYRVNSNGTGKYKYNRHINRTYEGCKFHNVLHNNYIV 91 (234)
T ss_dssp SSCEEEEEEEETTEEEEEEEEEECGGGCHHHHHHHHHHHH-TCCCC---------------CCCSTTCBCCEEETTTEEE
T ss_pred CCCEEEEEEEECCcccceEEEEEcCCCCcHHHHHHHHHhc-CCccccccccccccccccCCceEECCcEEEEEECCCEEE
Confidence 5889999999999999999999999999999999999999 33 2 4 779999999999999999
Q ss_pred eCCCcCCCCCCCccccCCC-----CCCCccccccCCCeEEEEec----CCCCCCCccceEEecC------CCCCCCCceE
Q 024387 163 GGDFTEGDGTGGISIYGSS-----FEDESFVLKHVGPGVLSMAN----AGPNTNGSQFFICTVK------TPWLDNRHVV 227 (268)
Q Consensus 163 gGd~~~~~g~gg~s~~g~~-----~~de~~~l~h~~~G~lsma~----~gp~s~gSqFfItl~~------~~~LDg~~~V 227 (268)
|||+..++|+|+.++||.. |+ ++.++|.++|+||||| .+|++++||||||+.+ .+|||++|+|
T Consensus 92 gGd~~~g~G~Gg~siyg~~~~p~~f~--~~~l~h~~~G~lsMAn~~~~~gpntngSQFFIt~~~~~~~~g~p~LDg~~tV 169 (234)
T 2ose_A 92 SGDIYNSNGSSAGTVYCDEPIPPVFG--DYFYPHESKGLLSLVPYTDESGNRYYDSTFMITLDDIRPSNVLDELDRDQVV 169 (234)
T ss_dssp ECCCC----CCCCCTTTTCCBCCCCC--SCCCCSCSTTEEEECCEECTTSCEEBCSCEEEESSCCCTTSSGGGSCTTSEE
T ss_pred cCCccCCCCCCCccccCCccCccccc--CcCccCCCCCEEEEecccccCCCCCccceEEEEecCccccCCCcccCCCeeE
Confidence 9998889999999999987 66 5689999999999999 8999999999999999 9999999999
Q ss_pred EEEEEcCHHHHHHhhcCCCCCCCCCCCCeEEEeeeEecC
Q 024387 228 FGHVIDGMDVVRKLESVETSRTDYPKVPCRIINSGELPL 266 (268)
Q Consensus 228 FG~VveGmdvL~~I~~~~td~~~~P~~~I~I~~cGvL~~ 266 (268)
||+|++|||||++|++++++.+++|.++|+|.+||+|+.
T Consensus 170 FG~Vv~GmdVv~~I~~~~t~~~~~P~~~V~I~~~~~l~~ 208 (234)
T 2ose_A 170 IGQVYGGLDVLDKINSMIKPYAGRKYPTFSIGKCGAYLD 208 (234)
T ss_dssp EEEEEECHHHHHHHHHHTCCCTTCCCCCEEEEEEEECCC
T ss_pred EEEEeCCHHHHHHHHhCCcCCCCCccCCEEEEEEEEecC
Confidence 999999999999999999999999999999999999964
No 20
>2poe_A Cyclophilin-like protein, putative; cryptosporidium parvum cyclophilin isomerase, structural genomics; 2.01A {Cryptosporidium parvum iowa II} PDB: 2qer_A
Probab=100.00 E-value=2.6e-47 Score=329.43 Aligned_cols=155 Identities=43% Similarity=0.648 Sum_probs=146.6
Q ss_pred EEEEEECCeeeeeEEEEEcCCCChHHHHHHHHHHhcCCCCcccCCCEEEEEEcCceeeeCCCcCCCCCCCccccCCCCCC
Q 024387 105 FFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTAGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGSSFED 184 (268)
Q Consensus 105 ~fDi~i~~t~~GrIvIeL~~d~aP~tv~nF~~Lc~~G~kg~gY~g~~f~Rvi~~f~iqgGd~~~~~g~gg~s~~g~~~~d 184 (268)
++++.+. |++|+|+||||+++||+||+||++||+.|+ |+|+.||||+|+|||||||++ ++|+|+.++||..|++
T Consensus 16 ~~~v~i~-t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~----Y~g~~FhRvi~~f~iQgGd~~-~~g~gg~si~g~~~~d 89 (185)
T 2poe_A 16 FQGVRII-TNYGDLKFELFCSQCPKACKNFLALSASGY----YKNTIFHKNIKGFIIQGGDPT-GTGKGGESIYGRYFDD 89 (185)
T ss_dssp CCEEEEE-ETTEEEEEEECTTTCHHHHHHHHHHHHTTT----TTTEEEEEECTTSEEEEEETT-SSSSCCCBTTBSCBCC
T ss_pred ceEEEEE-ecCccEEEEEeCCCCcHHHHHHHHHhccCC----CCCCEEEEEECCCEEEcCCCC-CCCCCCCccCCCcccc
Confidence 4556665 889999999999999999999999999666 999999999999999999987 7889999999999999
Q ss_pred Cc-cccccCCCeEEEEecCC----CCCCCccceEEecCCCCCCCCceEEEEEEcCHHHHHHhhcCCCCCCCCCCCCeEEE
Q 024387 185 ES-FVLKHVGPGVLSMANAG----PNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRII 259 (268)
Q Consensus 185 e~-~~l~h~~~G~lsma~~g----p~s~gSqFfItl~~~~~LDg~~~VFG~VveGmdvL~~I~~~~td~~~~P~~~I~I~ 259 (268)
|. ..++|.++|+|+||+.+ |++++|||||++.++++||++|+|||+|++|||||++|++++++.+++|.++|+|.
T Consensus 90 E~~~~l~h~~~G~lsmA~~g~~~~p~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~~~v~I~ 169 (185)
T 2poe_A 90 EIYPELKYDRRGILSMASKGASKKPNTNGSQFFITYSSLPQLNGEYVIFGKLIDGFETLNTLENCPSDKSHKPIDEIIIK 169 (185)
T ss_dssp CCCTTSCCCSTTEEEECCSCC-CCCSCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHSCBCTTSCBSSCCEEE
T ss_pred cccCCCccCCCeEEEEecCCCCCCCCCccceEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCCcCCCeEEE
Confidence 98 78899999999999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred eeeEec
Q 024387 260 NSGELP 265 (268)
Q Consensus 260 ~cGvL~ 265 (268)
+|+++.
T Consensus 170 ~~~i~~ 175 (185)
T 2poe_A 170 DIVIHS 175 (185)
T ss_dssp EEEEEC
T ss_pred EEEEEC
Confidence 999995
No 21
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=100.00 E-value=9.1e-47 Score=353.49 Aligned_cols=164 Identities=66% Similarity=1.084 Sum_probs=156.0
Q ss_pred cceEEEEEEECCeeeeeEEEEEcCCCChHHHHHHHHHHhcCCCCc--------ccCCCEEEEEEcCceeeeCCCcCCCCC
Q 024387 101 TTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTAGEKGY--------GYKGCSFHRIIKDFMIQGGDFTEGDGT 172 (268)
Q Consensus 101 ~~~v~fDi~i~~t~~GrIvIeL~~d~aP~tv~nF~~Lc~~G~kg~--------gY~g~~f~Rvi~~f~iqgGd~~~~~g~ 172 (268)
+++||||+.+++++.|+|+||||++.||+||+||++||+ +.+|+ .|+|+.||||+|+|||||||++.++|+
T Consensus 15 ~~~v~~~~~~~~~~~G~i~~~l~~~~~P~t~~nf~~l~~-~~~~~~~~~g~~~~y~~~~fhrv~~~f~~q~Gd~~~~~g~ 93 (370)
T 1ihg_A 15 NPRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCT-GEKGIGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGT 93 (370)
T ss_dssp SCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHH-CTTCBCTTTSSBSCCTTCBEEEEETTTEEEECCTTTSSSS
T ss_pred CCeEEEEEEECCEecccEEEEEcCCCCchHHHHHHHHcC-CCcCcCccCCCcceeCCcEeEEEECCcEEECCCCCCCCCC
Confidence 789999999999999999999999999999999999999 43332 399999999999999999999989999
Q ss_pred CCccccCCCCCCCccccccCCCeEEEEecCCCCCCCccceEEecCCCCCCCCceEEEEEEcCHHHHHHhhcCCCCCCCCC
Q 024387 173 GGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYP 252 (268)
Q Consensus 173 gg~s~~g~~~~de~~~l~h~~~G~lsma~~gp~s~gSqFfItl~~~~~LDg~~~VFG~VveGmdvL~~I~~~~td~~~~P 252 (268)
||.++||..|++|++.++|+++|+|+||+.||+++|||||||+.+.+|||++|+|||+|++||+||++|++.+++. ++|
T Consensus 94 g~~~~~~~~~~~e~~~~~~~~~g~l~ma~~~~~~~~sqffi~~~~~~~ld~~~~vfG~v~~g~~v~~~i~~~~~~~-~~P 172 (370)
T 1ihg_A 94 GGESIYGEKFEDENFHYKHDKEGLLSMANAGSNTNGSQFFITTVPTPHLDGKHVVFGQVIKGMGVAKILENVEVKG-EKP 172 (370)
T ss_dssp CCCBTTBSCBCCCCCCBCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCEET-TEE
T ss_pred CCCCCCCCCcCCCcCCcCCCCCeEEEEeeCCCCCCCceEEEeCCCCcccCCCceEEEEEecCHHHHHHHHcCCCCC-Ccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999998877 999
Q ss_pred CCCeEEEeeeEecC
Q 024387 253 KVPCRIINSGELPL 266 (268)
Q Consensus 253 ~~~I~I~~cGvL~~ 266 (268)
.++|+|.+||++..
T Consensus 173 ~~~v~I~~~g~l~~ 186 (370)
T 1ihg_A 173 AKLCVIAECGELKE 186 (370)
T ss_dssp SSCEEEEEEEEECT
T ss_pred ceeEEEEEEEEecc
Confidence 99999999999954
No 22
>2ok3_A Peptidyl-prolyl CIS-trans isomerase-like 3; beta-barrel, helix, disulfide bridge; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1xyh_A 2oju_A*
Probab=100.00 E-value=6.4e-47 Score=320.32 Aligned_cols=149 Identities=48% Similarity=0.740 Sum_probs=142.3
Q ss_pred eeeeeEEEEEcCCCChHHHHHHHHHHhcCCCCcccCCCEEEEEEcCceeeeCCCcCCCCCCCccccCCCCCCCcc-cccc
Q 024387 113 KPAGRIVMGLFGDVVPKTAENFRALCTAGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGSSFEDESF-VLKH 191 (268)
Q Consensus 113 t~~GrIvIeL~~d~aP~tv~nF~~Lc~~G~kg~gY~g~~f~Rvi~~f~iqgGd~~~~~g~gg~s~~g~~~~de~~-~l~h 191 (268)
|+.|+|+||||+++||+||+||++||+.|+ |+|+.|||++|+|||||||+. +++.|+.++|+..|++|.. .++|
T Consensus 7 T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~----Y~g~~fhRvi~~f~iQgGd~~-~~g~gg~si~g~~~~dE~~~~l~h 81 (161)
T 2ok3_A 7 TDVGDIKIEVFCERTPKTCENFLALCASNY----YNGCIFHRNIKGFMVQTGDPT-GTGRGGNSIWGKKFEDEYSEYLKH 81 (161)
T ss_dssp ETTEEEEEEECTTTCHHHHHHHHHHHHTTT----TTTCBCCEEETTTEEEECCTT-SSSSCCCCTTSSCBCCCCCTTCCS
T ss_pred eCCccEEEEEcCCCCcHHHHHHHHHhhhcc----cCCCEEEEEECCCEEecCCCC-CCCCCCCcccCCccccccCcCcCc
Confidence 789999999999999999999999999766 999999999999999999987 7889999999999999975 7899
Q ss_pred CCCeEEEEecCCCCCCCccceEEecCCCCCCCCceEEEEEEcCHHHHHHhhcCCCCCC-CCCCCCeEEEeeeEecC
Q 024387 192 VGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRT-DYPKVPCRIINSGELPL 266 (268)
Q Consensus 192 ~~~G~lsma~~gp~s~gSqFfItl~~~~~LDg~~~VFG~VveGmdvL~~I~~~~td~~-~~P~~~I~I~~cGvL~~ 266 (268)
+++|+|+||+.+|++++|||||++.+.++||++|+|||+|++|||||++|++++++.+ ++|.++|+|.+|.++..
T Consensus 82 ~~~G~lsma~~gp~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~~~~~~~~P~~~v~I~~~~i~~~ 157 (161)
T 2ok3_A 82 NVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIHAN 157 (161)
T ss_dssp CSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTCCBCTTTCCBSSCCBEEEEEEECC
T ss_pred CCCeEEEEecCCCCCcceEEEEEcCCCCccCCCEeEEEEEeCCHHHHHHHHhCCccCCCCCcCCCeEEEEEEEecC
Confidence 8999999999999999999999999999999999999999999999999999999987 99999999999999863
No 23
>2fu0_A Cyclophilin, putative; PFE0505W, cyclosporin-binding domain, structura genomics, structural genomics consortium, SGC, unknown FUNC; 1.80A {Plasmodium falciparum} SCOP: b.62.1.1
Probab=100.00 E-value=6.3e-47 Score=320.12 Aligned_cols=149 Identities=49% Similarity=0.785 Sum_probs=141.5
Q ss_pred CeeeeeEEEEEcCCCChHHHHHHHHHHhcCCCCcccCCCEEEEEEcCceeeeCCCcCCCCCCCccccCCCCCCCcc-ccc
Q 024387 112 GKPAGRIVMGLFGDVVPKTAENFRALCTAGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGSSFEDESF-VLK 190 (268)
Q Consensus 112 ~t~~GrIvIeL~~d~aP~tv~nF~~Lc~~G~kg~gY~g~~f~Rvi~~f~iqgGd~~~~~g~gg~s~~g~~~~de~~-~l~ 190 (268)
.|+.|+|+||||+++||+||+||++||+.|+ |+|+.|||++|+|||||||+. ++|.|+.++||..|++|.. .++
T Consensus 11 ~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~----Y~g~~fhRvi~~f~iQgGd~~-~~g~gg~si~g~~~~dE~~~~l~ 85 (160)
T 2fu0_A 11 YTTMGDIHISLFYKECKKTVQNFSVHSINGY----YNNCIFHRVIKHFMVQTGDPS-GDGTGGESIWGNEFEDEFFDHLN 85 (160)
T ss_dssp EETTEEEEEEECTTTCHHHHHHHHHHHHTTT----TTTCBCCEEETTTEEEECCTT-SSSSCCCCTTSSCBCCCCBTTBC
T ss_pred EecCccEEEEEeCCCChHHHHHHHHHhccCc----cCCCEEEEEECCCEEEeCCcC-CCCCCCCcccCCCccccccCCcc
Confidence 4678999999999999999999999999666 999999999999999999986 7889999999999999987 689
Q ss_pred cCCCeEEEEecCCCCCCCccceEEecCCCCCCCCceEEEEEEcCHHHHHHhhcCCCCCCCCCCCCeEEEeeeEec
Q 024387 191 HVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRIINSGELP 265 (268)
Q Consensus 191 h~~~G~lsma~~gp~s~gSqFfItl~~~~~LDg~~~VFG~VveGmdvL~~I~~~~td~~~~P~~~I~I~~cGvL~ 265 (268)
|.++|+|+||+.+|++++|||||++.++++||++|+|||+|++|||||++|++++++++++|.++|+|.+|.+++
T Consensus 86 h~~~G~lsmA~~gp~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v~I~~~~v~~ 160 (160)
T 2fu0_A 86 HSKPFMVSMANCGPNTNGSQFFITTVPCPWLDFKHTVFGKVTQGSKIVLDIEKVRTDKRDKPLEDIKILNIKINN 160 (160)
T ss_dssp SSSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCCBEEEEEEC-
T ss_pred cCCceEEEEecCCCCCcccEEEEECCCCCccCCCcEEEEEEEcCHHHHHHHHhCCcCCCCCcCCCeEEEEEEEeC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999863
No 24
>2x7k_A Peptidyl-prolyl CIS-trans isomerase-like 1; isomerase-immunosuppressant complex, immunosuppressant; HET: MLE MVA BMT ABA SAR; 1.15A {Homo sapiens} PDB: 1xwn_A
Probab=100.00 E-value=1.9e-46 Score=318.95 Aligned_cols=154 Identities=49% Similarity=0.838 Sum_probs=144.5
Q ss_pred cceEEEEEEECCeeeeeEEEEEcCCCChHHHHHHHHHHhcCCCCcccCCCEEEEEEcCceeeeCCCcCCCCCCCccccCC
Q 024387 101 TTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTAGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGS 180 (268)
Q Consensus 101 ~~~v~fDi~i~~t~~GrIvIeL~~d~aP~tv~nF~~Lc~~G~kg~gY~g~~f~Rvi~~f~iqgGd~~~~~g~gg~s~~g~ 180 (268)
+++|.|+ |++|+|+||||++.||+||+||++||+.|+ |+|+.||||+|+|||||||+. +++.|+.++|+.
T Consensus 11 ~~~v~l~-----t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~----Y~g~~fhRvi~~f~iQgGd~~-~~g~gg~si~g~ 80 (166)
T 2x7k_A 11 PPNVYLE-----TSMGIIVLELYWKHAPKTCKNFAELARRGY----YNGTKFHRIIKDFMIQGGDPT-GTGRGGASIYGK 80 (166)
T ss_dssp CSEEEEE-----ETTEEEEEEECTTTCHHHHHHHHHHHHHTT----TTTEECCEEETTTEEEECCTT-SSSSCCCCTTSS
T ss_pred CCEEEEE-----eCCCcEEEEEccCCCCHHHHHHHHHHhcCC----CCCCEEEEEECCCEEEcCCCC-CCCCCCCccCCC
Confidence 4566654 457999999999999999999999999766 999999999999999999987 788999999999
Q ss_pred CCCCCc-cccccCCCeEEEEecCCCCCCCccceEEecCCCCCCCCceEEEEEEcCHHHHHHhhcCCCCCCCCCCCCeEEE
Q 024387 181 SFEDES-FVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRII 259 (268)
Q Consensus 181 ~~~de~-~~l~h~~~G~lsma~~gp~s~gSqFfItl~~~~~LDg~~~VFG~VveGmdvL~~I~~~~td~~~~P~~~I~I~ 259 (268)
.|++|. ..++|.++|+|+|||.+|++++|||||++.+.++||++|+|||+|++|||||++|++++++.+++|.++|+|.
T Consensus 81 ~~~dE~~~~l~h~~~G~lsmAn~gp~s~gSQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~t~~~~~P~~~i~I~ 160 (166)
T 2x7k_A 81 QFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQDRPVDDVKII 160 (166)
T ss_dssp CBCCCCCTTSCCCSTTEEEECBSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHTTSCBCTTSCBSSCCEEE
T ss_pred ccccccccccCCCCCeEEEEeeCCCCCccceEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHcCCcCCCCCcCCCeEEE
Confidence 999998 5889988999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeEe
Q 024387 260 NSGEL 264 (268)
Q Consensus 260 ~cGvL 264 (268)
+|.++
T Consensus 161 ~~~i~ 165 (166)
T 2x7k_A 161 KAYPS 165 (166)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 99986
No 25
>2b71_A Cyclophilin-like protein; structural genomics, structural genomics consortium, SGC, isomerase; 2.50A {Plasmodium yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=3.9e-46 Score=324.53 Aligned_cols=156 Identities=42% Similarity=0.680 Sum_probs=144.2
Q ss_pred cceEEEEEEECCeeeeeEEEEEcCCCChHHHHHHHHHHhcCCCCcccCCCEEEEEEcCceeeeCCCcCCCCCCCccccCC
Q 024387 101 TTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTAGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGS 180 (268)
Q Consensus 101 ~~~v~fDi~i~~t~~GrIvIeL~~d~aP~tv~nF~~Lc~~G~kg~gY~g~~f~Rvi~~f~iqgGd~~~~~g~gg~s~~g~ 180 (268)
+.+|.|+ |+.|+|+||||++.||+||+||++||+.|+ |+|+.||||+|+|||||||++ ++|.|+.++||.
T Consensus 38 ~~~V~l~-----T~~G~I~ieL~~~~aP~tv~NF~~L~~~g~----Y~g~~FhRVi~~f~iQgGd~~-~~g~gg~si~g~ 107 (196)
T 2b71_A 38 RGYITIY-----TNLGDFEVELYWYHSPKTCLNFYTLCEMGF----YDNTIFHRVIPNFVIQGGDPT-GTGKGGKSIYGE 107 (196)
T ss_dssp SCEEEEE-----ETTEEEEEEECTTTSHHHHHHHHHHHHTTT----TTTEEEEEEETTTEEEEEETT-SSSSCCCBTTBS
T ss_pred CcEEEEE-----eCCCCEEEEEeCCCCcHHHHHHHHHhhcCC----cCCCEEEEEeCCcEEEcCCCC-CCCCCCCccCCC
Confidence 4566665 567999999999999999999999999666 999999999999999999987 788999999999
Q ss_pred CCCCCc-cccccCCCeEEEEecCCCCCCCccceEEecCCCCCCCCceEEEEEEcCHHHHHHhhcCCCCCCCCCCCCeEEE
Q 024387 181 SFEDES-FVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRII 259 (268)
Q Consensus 181 ~~~de~-~~l~h~~~G~lsma~~gp~s~gSqFfItl~~~~~LDg~~~VFG~VveGmdvL~~I~~~~td~~~~P~~~I~I~ 259 (268)
.|++|. ..++|.++|+|+||+.+|++++|||||++.+.++||++|+|||+|++|||||++|++++++.+++|.++|+|.
T Consensus 108 ~~~dE~~~~l~h~~~G~lsMAn~gpns~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~~~i~I~ 187 (196)
T 2b71_A 108 YFEDEINKELKHTGAGILSMSNNGPNTNSSQFFITLAPLPHLDGKHTIFARVSKNMTCIENIASVQTTATNKPIFDLKIL 187 (196)
T ss_dssp CBCCCCCTTCCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTCCBSSCCEEE
T ss_pred cccccccCCcCcCCCeEEEEccCCCCCcccEEEEECCCCCccCCCEeEEEEEecCHHHHHHHHhCCcCCCCCCCCCeEEE
Confidence 999995 6789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeEecC
Q 024387 260 NSGELPL 266 (268)
Q Consensus 260 ~cGvL~~ 266 (268)
+|+++..
T Consensus 188 ~~~i~~d 194 (196)
T 2b71_A 188 RTSTAVN 194 (196)
T ss_dssp EEEC---
T ss_pred EEEEecC
Confidence 9999853
No 26
>1zkc_A Peptidyl-prolyl CIS-trans isomerase like 2; CIS-trans isomerization, peptidylprolyl isomerase, protein- folding, structural genomics consortium; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=4.1e-46 Score=324.52 Aligned_cols=149 Identities=46% Similarity=0.768 Sum_probs=142.1
Q ss_pred eeeeeEEEEEcCCCChHHHHHHHHHHhcCCCCcccCCCEEEEEEcCceeeeCCCcCCCCCCCccccCCCCCCC-cccccc
Q 024387 113 KPAGRIVMGLFGDVVPKTAENFRALCTAGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGSSFEDE-SFVLKH 191 (268)
Q Consensus 113 t~~GrIvIeL~~d~aP~tv~nF~~Lc~~G~kg~gY~g~~f~Rvi~~f~iqgGd~~~~~g~gg~s~~g~~~~de-~~~l~h 191 (268)
|+.|+|+||||++.||+||+||++||+.|+ |+|+.||||+|+|||||||++ ++|.|+.++||..|++| +..++|
T Consensus 26 T~~G~I~ieL~~~~aP~tv~NF~~L~~~g~----Ydg~~FhRVi~~f~iQgGd~~-~~g~Gg~si~g~~f~dE~~~~l~h 100 (197)
T 1zkc_A 26 TNKGDLNLELHCDLTPKTCENFIRLCKKHY----YDGTIFHRSIRNFVIQGGDPT-GTGTGGESYWGKPFKDEFRPNLSH 100 (197)
T ss_dssp ETTEEEEEEECTTTSHHHHHHHHHHHHTTT----TTTEEEEEEETTTEEEECCTT-SSSSCCCBTTBSCBCCCCCTTCCS
T ss_pred eCCccEEEEEcCCCCcHHHHHHHHHHhcCC----CCCCEEEEEeCCCEEEcCCCC-CCCCCCCccCCCccccccCcCcCC
Confidence 568999999999999999999999999666 999999999999999999987 78899999999999999 478899
Q ss_pred CCCeEEEEecCCCCCCCccceEEecCCCCCCCCceEEEEEEcCHHHHHHhhcCCCCCC-CCCCCCeEEEeeeEecC
Q 024387 192 VGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRT-DYPKVPCRIINSGELPL 266 (268)
Q Consensus 192 ~~~G~lsma~~gp~s~gSqFfItl~~~~~LDg~~~VFG~VveGmdvL~~I~~~~td~~-~~P~~~I~I~~cGvL~~ 266 (268)
+++|+|+|||.+|++++|||||++.++++||++|+|||+|++|||||++|++++++.+ ++|.++|+|.+|+++..
T Consensus 101 ~~~G~lsMAn~gp~sngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~~P~~~i~I~~~~v~~d 176 (197)
T 1zkc_A 101 TGRGILSMANSGPNSNRSQFFITFRSCAYLDKKHTIFGRVVGGFDVLTAMENVESDPKTDRPKEEIRIDATTVFVD 176 (197)
T ss_dssp CSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHSCBCTTTCCBSSCCEEEEEEEEEC
T ss_pred CCceEEEEecCCCCCcccEEEEEcCCCCccCCCccEEEEEEcCHHHHHHHHcCCCCCCCCCcCCCeEEEEEEEEcC
Confidence 9999999999999999999999999999999999999999999999999999999987 99999999999999964
No 27
>2a2n_A Peptidylprolyl isomerase domain and WD repeat CON; CIS-trans isomerization, protein-folding, peptidylprolyl ISO structural genomics; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=2.7e-46 Score=320.72 Aligned_cols=150 Identities=53% Similarity=0.805 Sum_probs=141.5
Q ss_pred EECCeeeeeEEEEEcCCCChHHHHHHHHHHhcCCCCcccCCCEEEEEEcCceeeeCCCcCCCCCCCccccCCCCCCCcc-
Q 024387 109 DIGGKPAGRIVMGLFGDVVPKTAENFRALCTAGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGSSFEDESF- 187 (268)
Q Consensus 109 ~i~~t~~GrIvIeL~~d~aP~tv~nF~~Lc~~G~kg~gY~g~~f~Rvi~~f~iqgGd~~~~~g~gg~s~~g~~~~de~~- 187 (268)
.+.+|++|+|+||||+++||++|+||++||+.|+ |+|+.||||+|+|||||||+. ++|.|+.++||..|++|..
T Consensus 24 v~~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~----Y~g~~FhRvi~~f~iQgGd~~-~~g~gg~si~g~~~~dE~~~ 98 (176)
T 2a2n_A 24 AIIHTSMGDIHTKLFPVECPKTVENFCVHSRNGY----YNGHTFHRIIKGFMIQTGDPT-GTGMGGESIWGGEFEDEFHS 98 (176)
T ss_dssp EEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTT----TTTCBCCEEETTTEEEECCTT-SSSSCCCCTTSSCBCCCCCT
T ss_pred EEEEecCccEEEEEeCCCChHHHHHHHHHhhcCc----cCCCEEEEEECCcEEEccCCC-CCCCCCCcccCCcccccccc
Confidence 3446788999999999999999999999999666 999999999999999999986 7889999999999999987
Q ss_pred ccccCCCeEEEEecCCCCCCCccceEEecCCCCCCCCceEEEEEEcCHHHHHHhhcCCCC-CCCCCCCCeEEEeeeE
Q 024387 188 VLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETS-RTDYPKVPCRIINSGE 263 (268)
Q Consensus 188 ~l~h~~~G~lsma~~gp~s~gSqFfItl~~~~~LDg~~~VFG~VveGmdvL~~I~~~~td-~~~~P~~~I~I~~cGv 263 (268)
.++|.++|+|+||+.+|++++|||||++.+++|||++|+|||+|++|||||++|++++++ .+++|.++|+|.+|.+
T Consensus 99 ~l~h~~~G~lsmA~~gp~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~~P~~~v~I~~v~v 175 (176)
T 2a2n_A 99 TLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQRISNVKVNPKTDKPYEDVSIINITV 175 (176)
T ss_dssp TCCSCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTTCCBSSCCBEEEEEE
T ss_pred ccccCCceEEEEEeCCCCCcccEEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHcCCccCCCCccCCCeEEEEEEE
Confidence 689999999999999999999999999999999999999999999999999999999998 7899999999999875
No 28
>3bo7_A Peptidyl-prolyl CIS-trans isomerase cyclophilin-T; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, structural G structural genomics consortium, SGC; HET: BMT; 2.35A {Toxoplasma gondii}
Probab=100.00 E-value=1.1e-45 Score=323.04 Aligned_cols=149 Identities=37% Similarity=0.606 Sum_probs=136.0
Q ss_pred eeeeeEEEEEcCCCChHHHHHHHHHHhcCCCCcccCCCEEEEEEcCceeeeC-----CCcCCCCCCCcccc-------CC
Q 024387 113 KPAGRIVMGLFGDVVPKTAENFRALCTAGEKGYGYKGCSFHRIIKDFMIQGG-----DFTEGDGTGGISIY-------GS 180 (268)
Q Consensus 113 t~~GrIvIeL~~d~aP~tv~nF~~Lc~~G~kg~gY~g~~f~Rvi~~f~iqgG-----d~~~~~g~gg~s~~-------g~ 180 (268)
|+.|+|+||||++.||+||+||++||+.|+ |+|+.||||+++|||||| |++ ++|.|+.++| +.
T Consensus 13 T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~----Ydg~~FhRvi~~f~iQgG~~~~~Dp~-~~g~gg~si~~~~~~~~g~ 87 (201)
T 3bo7_A 13 TTQGSLNIELHADMAPRACDSFLRLCAVKY----FDDTIFHRCIRNFMIQGGRAELRQPS-KKKEVQQSPRSISGFPGGA 87 (201)
T ss_dssp ETTEEEEEEECTTTCHHHHHHHHHHHHTTT----TTTCBEEEEETTTEEEECCGGGCCC--------CCSSCCCSSTTCC
T ss_pred eCCCCEEEEEcCCCCcHHHHHHHHHHhcCc----cCCCEEEEeeCCCEEEcCcccccCCC-CCCCCCccccccccccCCC
Confidence 668999999999999999999999999666 999999999999999999 986 7888999999 88
Q ss_pred CCCCC-ccccccCCCeEEEEecCCCCCCCccceEEecCCCCCCCCceEEEEEEcCHHHHHHhhcCCCCCCCCCCCCeEEE
Q 024387 181 SFEDE-SFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRII 259 (268)
Q Consensus 181 ~~~de-~~~l~h~~~G~lsma~~gp~s~gSqFfItl~~~~~LDg~~~VFG~VveGmdvL~~I~~~~td~~~~P~~~I~I~ 259 (268)
.|++| +..++|+.+|+|+||+.+|++++|||||++.++++||++|+|||+|++|||||++|++++++.+++|.++|+|.
T Consensus 88 ~f~dE~~~~l~h~~~G~lsmA~~gp~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~~~i~I~ 167 (201)
T 3bo7_A 88 PFEDEFDNRLVHQGIGVLSMANDGKHSNLSEFFITFKSCEHLNNKHTIFGRVVGGLDVLRQWEKLETDKKDKPLKPPKVE 167 (201)
T ss_dssp CBCCCCCTTCCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHTTCCBCTTSCBSSCCBEE
T ss_pred cccCcccCCCCcCCCcEEEEeeCCCCCcccEEEEECCCCcccCCCceEEEEEecCHHHHHHHHhCCcCCCCCcCCCeEEE
Confidence 99999 47889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeEecC
Q 024387 260 NSGELPL 266 (268)
Q Consensus 260 ~cGvL~~ 266 (268)
+|++|..
T Consensus 168 ~~~v~~d 174 (201)
T 3bo7_A 168 EIIVFKN 174 (201)
T ss_dssp EEEEEEC
T ss_pred EEEEEcC
Confidence 9999964
No 29
>2k7n_A Peptidyl-prolyl CIS-trans isomerase-like 1; beta barrel, disorder-order transition, HOOK-like, mRNA processing, mRNA splicing, rotamase; NMR {Homo sapiens}
Probab=100.00 E-value=1.3e-45 Score=322.55 Aligned_cols=156 Identities=49% Similarity=0.814 Sum_probs=146.0
Q ss_pred cceEEEEEEECCeeeeeEEEEEcCCCChHHHHHHHHHHhcCCCCcccCCCEEEEEEcCceeeeCCCcCCCCCCCccccCC
Q 024387 101 TTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTAGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGS 180 (268)
Q Consensus 101 ~~~v~fDi~i~~t~~GrIvIeL~~d~aP~tv~nF~~Lc~~G~kg~gY~g~~f~Rvi~~f~iqgGd~~~~~g~gg~s~~g~ 180 (268)
+++|.|+ |++|+|+||||+++||++|+||++||+.|+ |+|+.||||+|+|||||||+. +++.++.++|+.
T Consensus 11 ~~~V~l~-----T~~G~I~ieL~~d~aP~tv~NF~~L~~~g~----Ydg~~FhRVi~~F~iQgGd~~-~~g~gg~si~g~ 80 (203)
T 2k7n_A 11 PPNVYLE-----TSMGIIVLELYWKHAPKTCKNFAELARRGY----YNGTKFHRIIKDFMIQGGDPT-GTGRGGASIYGK 80 (203)
T ss_dssp CSEEEEE-----ESSCEEEEEECTTTCTTHHHHHHHHHHHTC----GGGCEEEEEETTTEEEEECSS-SSSSCCCTTSCS
T ss_pred CCEEEEE-----eCCCcEEEEEccCCCcHHHHHHHHHHhcCc----cCCCEEEEEeCCcEEEcCCCC-CCCCCCCccCCC
Confidence 4566664 457999999999999999999999999766 999999999999999999987 788899999999
Q ss_pred CCCCCc-cccccCCCeEEEEecCCCCCCCccceEEecCCCCCCCCceEEEEEEcCHHHHHHhhcCCCCCCCCCCCCeEEE
Q 024387 181 SFEDES-FVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRII 259 (268)
Q Consensus 181 ~~~de~-~~l~h~~~G~lsma~~gp~s~gSqFfItl~~~~~LDg~~~VFG~VveGmdvL~~I~~~~td~~~~P~~~I~I~ 259 (268)
.|++|. ..++|.++|+|+|||.+||+++|||||++.++++||++|+|||+|++|||||++|++++++++++|.++|+|.
T Consensus 81 ~f~dE~~~~l~h~~~G~lsMAn~gpnsngSQFFIt~~~~~~LDg~~tVFG~VveGmdvv~kI~~~~t~~~~~P~~~V~I~ 160 (203)
T 2k7n_A 81 QFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQDRPVDDVKII 160 (203)
T ss_dssp CBCCCCCCSSCCCSSCEEEEEESSTTCEEEEEEEESSCCCSSTTTSCEEEEEESCHHHHHHHHSCCEEETTEECCCCBEE
T ss_pred cccccccccccCCCCeEEEEeeCCCCCcccEEEEEcCCCCccCCCeeEEEEEEcCHHHHHHHHcCCcCCCCCcCCCeEEE
Confidence 999998 5899988999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeEecC
Q 024387 260 NSGELPL 266 (268)
Q Consensus 260 ~cGvL~~ 266 (268)
+|++++.
T Consensus 161 ~~~v~~~ 167 (203)
T 2k7n_A 161 KAYPSGG 167 (203)
T ss_dssp EEEECCC
T ss_pred EEEEEec
Confidence 9999864
No 30
>1w74_A Peptidyl-prolyl CIS-trans isomerase A; cyclophilin, ppiase, RV0009, rotamase, structural proteomics in europe, spine; 2.6A {Mycobacterium tuberculosis} SCOP: b.62.1.1
Probab=100.00 E-value=5.9e-45 Score=316.01 Aligned_cols=147 Identities=48% Similarity=0.747 Sum_probs=135.9
Q ss_pred CeeeeeEEEEEcCCCChHHHHHHHHHHhcCCC-------------CcccCCCEEEEEEcCceeeeCCCcCCCCCCCcccc
Q 024387 112 GKPAGRIVMGLFGDVVPKTAENFRALCTAGEK-------------GYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIY 178 (268)
Q Consensus 112 ~t~~GrIvIeL~~d~aP~tv~nF~~Lc~~G~k-------------g~gY~g~~f~Rvi~~f~iqgGd~~~~~g~gg~s~~ 178 (268)
.|+.|+|+||||++.||+||+||++||+ |.+ ++ |+|+.||||+|+|||||||+. ++|+|+ +
T Consensus 29 ~t~~G~I~ieL~~~~aP~tv~NF~~L~t-G~~~~~~~~~g~~~~~~~-Y~g~~FhRVi~~fmiQgGd~~-g~G~gg---~ 102 (191)
T 1w74_A 29 HTNRGDIKIALFGNHAPKTVANFVGLAQ-GTKDYSTQNASGGPSGPF-YDGAVFHRVIQGFMIQGGDPT-GTGRGG---P 102 (191)
T ss_dssp EETTEEEEEEECTTTSHHHHHHHHHHHH-TCSCCSSCCTTBSSSSCS-STTEEEEEEETTTEEEECCTT-SSSSCC---S
T ss_pred EecceeEEEEEcCCCChHHHHHHHHHhc-CCcccccccccccccCCc-cCCCEEEEEeCCCEEecCCCC-CCCCCC---C
Confidence 3678999999999999999999999996 322 34 999999999999999999975 677777 4
Q ss_pred CCCCCCC-ccccccCCCeEEEEecCCCCCCCccceEEecCCCCCCCCceEEEEEEc--CHHHHHHhhcCCCCCCCCCCCC
Q 024387 179 GSSFEDE-SFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVID--GMDVVRKLESVETSRTDYPKVP 255 (268)
Q Consensus 179 g~~~~de-~~~l~h~~~G~lsma~~gp~s~gSqFfItl~~~~~LDg~~~VFG~Vve--GmdvL~~I~~~~td~~~~P~~~ 255 (268)
|..|++| ++.++|.++|+|+|||.+|++++||||||+.+.+|||++|+|||+|++ |||||++|++++++.+++|.++
T Consensus 103 g~~f~dE~~~~l~h~~~G~lsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~~~Gmdvv~~I~~~~t~~~~~P~~~ 182 (191)
T 1w74_A 103 GYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDP 182 (191)
T ss_dssp SCCBCCCCCTTCCSCSSSEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEECSHHHHHHHHHHHTSCBCTTSCBSSC
T ss_pred CCccccccccCCCcCCCcEEEEeeCCCCCccceEEEEcCCCcccCCCeeEEEEEEECCCHHHHHHHHcCCcCCCCCcCCC
Confidence 8889999 478999999999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred eEEEeeeEe
Q 024387 256 CRIINSGEL 264 (268)
Q Consensus 256 I~I~~cGvL 264 (268)
|+|.+|+++
T Consensus 183 v~I~~~~i~ 191 (191)
T 1w74_A 183 VVIESITIS 191 (191)
T ss_dssp CEEEEEEEC
T ss_pred eEEEEEEEC
Confidence 999999985
No 31
>2hq6_A Serologically defined colon cancer antigen 10; protein folding, peptidyl-prolyl CIS-trans isomerase, struct genomics; 1.75A {Homo sapiens}
Probab=100.00 E-value=9.6e-45 Score=313.30 Aligned_cols=161 Identities=37% Similarity=0.642 Sum_probs=147.4
Q ss_pred cccccccceEEEEEEECCeeeeeEEEEEcCCCChHHHHHHHHHHhcCCCCcccCCCEEEEEEcCceeeeCCCcCCCCCCC
Q 024387 95 ELQAKVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTAGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGG 174 (268)
Q Consensus 95 ~~~~~~~~~v~fDi~i~~t~~GrIvIeL~~d~aP~tv~nF~~Lc~~G~kg~gY~g~~f~Rvi~~f~iqgGd~~~~~g~gg 174 (268)
...+..+.+|+|++ ++|+|+||||+++||++|+||++||+.|+ |+|+.||||+|+|||||||+. ++|.|+
T Consensus 18 ~~~~~~~~~V~l~T-----~~G~I~ieL~~~~aP~tv~NF~~L~~~g~----Y~g~~FhRvi~~f~iQgGd~~-~~g~gg 87 (185)
T 2hq6_A 18 GSEPPTNGKVLLKT-----TAGDIDIELWSKEAPKACRNFIQLCLEAY----YDNTIFHRVVPGFIVQGGDPT-GTGSGG 87 (185)
T ss_dssp TCCCCCBCEEEEEE-----TTEEEEEEEBTTTCHHHHHHHHHHHHTTT----TTTEECCEEETTTEEEECCTT-SSSSCC
T ss_pred ccCCCCCCEEEEEe-----CCccEEEEEeCCCCcHHHHHHHHHhhcCc----cCCCEEEEEECCCEEEcCCCC-CCCCCC
Confidence 34455677888865 46999999999999999999999999666 999999999999999999986 788999
Q ss_pred ccccCCCCCCCcc-ccccCCCeEEEEecCCCCCCCccceEEecCCCCCCCCceEEEEEEcCHHH--HHHhhcCCCCCCCC
Q 024387 175 ISIYGSSFEDESF-VLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDV--VRKLESVETSRTDY 251 (268)
Q Consensus 175 ~s~~g~~~~de~~-~l~h~~~G~lsma~~gp~s~gSqFfItl~~~~~LDg~~~VFG~VveGmdv--L~~I~~~~td~~~~ 251 (268)
.++||..|++|.. .++|+++|+|+|||.++++++|||||++.++++||++|+|||+|+ ||++ +++|++++++++++
T Consensus 88 ~si~g~~~~dE~~~~l~h~~~G~lsMA~~g~~s~gSQFFIt~~~~~~LDg~~tVFG~V~-G~~v~~~~~i~~~~~~~~~~ 166 (185)
T 2hq6_A 88 ESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKVT-GDTVYNMLRLSEVDIDDDER 166 (185)
T ss_dssp CCTTSSCBCCCCBTTBCSCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEC-GGGHHHHHHTTCSCBCTTSC
T ss_pred CcccCCccccccccCcccCCCeEEEEccCCCCCccceEEEECCCCCccCCCceEEEEEE-eCeeehhhHHhhCCcCCCCC
Confidence 9999999999985 688989999999999999999999999999999999999999999 8876 47899999999999
Q ss_pred CCCCeEEEeeeEecC
Q 024387 252 PKVPCRIINSGELPL 266 (268)
Q Consensus 252 P~~~I~I~~cGvL~~ 266 (268)
|.++|+|.+|++|+.
T Consensus 167 P~~~v~I~~~~v~~~ 181 (185)
T 2hq6_A 167 PHNPHKIKSCEVLFN 181 (185)
T ss_dssp BSSCCEEEEEEEEEC
T ss_pred CCCCeEEEEEEEeCC
Confidence 999999999999964
No 32
>1v9t_A Cyclophilin B; beta barrel, isomerase-isomerase inhibitor complex; HET: NIT; 1.70A {Escherichia coli} SCOP: b.62.1.1 PDB: 1j2a_A* 1vai_A* 1clh_A
Probab=100.00 E-value=2.7e-44 Score=305.53 Aligned_cols=154 Identities=32% Similarity=0.512 Sum_probs=136.4
Q ss_pred ccceEEEEEEECCeeeeeEEEEEcCCCChHHHHHHHHHHhcCCCCcccCCCEEEEEEcCceeeeCCCcCCCCCCCccccC
Q 024387 100 VTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTAGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYG 179 (268)
Q Consensus 100 ~~~~v~fDi~i~~t~~GrIvIeL~~d~aP~tv~nF~~Lc~~G~kg~gY~g~~f~Rvi~~f~iqgGd~~~~~g~gg~s~~g 179 (268)
-+++|+|+ |++|+|+||||+++||+||+||++||+.|+ |+|+.||||+|+|||||||++...+ ...++
T Consensus 3 ~~~~v~~~-----t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~----Y~g~~FhRvi~~f~iQgGd~~~~~~---~~~~g 70 (166)
T 1v9t_A 3 GDPHVLLT-----TSAGNIELELDKQKAPVSVQNFVDYVNSGF----YNNTTFHRVIPGFMIQGGGFTEQMQ---QKKPN 70 (166)
T ss_dssp CSCEEEEE-----ETTEEEEEEECTTTCHHHHHHHHHHHHTTT----TTTCBEEEEETTTEEEESSBCTTCC---BCCCC
T ss_pred CCeEEEEE-----eCCccEEEEEcCCCCcHHHHHHHHHhccCC----CCCCEEEEEECCcEEEcCCcCcCCC---CCCCC
Confidence 35677776 678999999999999999999999999666 9999999999999999999875432 23357
Q ss_pred CCCCCCccccccCCCeEEEEecC-CCCCCCccceEEecCCCCCCCC-----ceEEEEEEcCHHHHHHhhcCCCCC----C
Q 024387 180 SSFEDESFVLKHVGPGVLSMANA-GPNTNGSQFFICTVKTPWLDNR-----HVVFGHVIDGMDVVRKLESVETSR----T 249 (268)
Q Consensus 180 ~~~~de~~~l~h~~~G~lsma~~-gp~s~gSqFfItl~~~~~LDg~-----~~VFG~VveGmdvL~~I~~~~td~----~ 249 (268)
.+|++|.....|+.+|+|+|||. +|++++|||||++.+.+|||++ |+|||+|++|||||++|++++++. +
T Consensus 71 ~~~~dE~~~~l~~~~G~lsmA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~tvFG~Vv~G~dvv~~I~~~~~~~~~~~~ 150 (166)
T 1v9t_A 71 PPIKNEADNGLRNTRGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVADKISQVPTHDVGPYQ 150 (166)
T ss_dssp CCBCCCGGGSCCCCTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSCCCCCEEEEEEECHHHHHHHHTSCEEEETTEE
T ss_pred CcccccccccccCCceEEEEeecCCCCCccceEEEEeCCccccCCccCcCCeeEEEEEecCHHHHHHHHhCCCCCCCccC
Confidence 78999986655557999999996 6999999999999999999998 999999999999999999999986 5
Q ss_pred CCCCCCeEEEeeeEec
Q 024387 250 DYPKVPCRIINSGELP 265 (268)
Q Consensus 250 ~~P~~~I~I~~cGvL~ 265 (268)
++|.++|+|.+|++++
T Consensus 151 ~~P~~~v~I~~~~v~~ 166 (166)
T 1v9t_A 151 NVPSKPVVILSATVLP 166 (166)
T ss_dssp EEESSCCBEEEEEECC
T ss_pred CCcCCCeEEEEEEEeC
Confidence 7999999999999974
No 33
>1lop_A Cyclophilin A; rotamase, isomerase-isomerase inhibitor complex; HET: NIT; 1.80A {Escherichia coli} SCOP: b.62.1.1 PDB: 2nul_A 2rs4_A
Probab=100.00 E-value=3.7e-44 Score=304.17 Aligned_cols=146 Identities=37% Similarity=0.579 Sum_probs=133.0
Q ss_pred CeeeeeEEEEEcCCCChHHHHHHHHHHhcCCCCcccCCCEEEEEEcCceeeeCCCcCCCCCCCccccCCCCCCCccc-cc
Q 024387 112 GKPAGRIVMGLFGDVVPKTAENFRALCTAGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGSSFEDESFV-LK 190 (268)
Q Consensus 112 ~t~~GrIvIeL~~d~aP~tv~nF~~Lc~~G~kg~gY~g~~f~Rvi~~f~iqgGd~~~~~g~gg~s~~g~~~~de~~~-l~ 190 (268)
.|++|+|+||||+++||+||+||++||+.|+ |+|+.||||+|+|||||||++.+. +.++++..|++|... ++
T Consensus 5 ~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~----Y~g~~FhRvi~~f~iQgGd~~~~~---g~~~~g~~~~dE~~~~l~ 77 (164)
T 1lop_A 5 HTNHGDIVIKTFDDKAPETVKNFLDYCREGF----YNNTIFHRVINGFMIQGGGFEPGM---KQKATKEPIKNEANNGLK 77 (164)
T ss_dssp EETTEEEEEEECTTTSHHHHHHHHHHHHTTT----TTTEECCEEETTTEEEESSEETTT---EECCCCCCBCCCCCSSCC
T ss_pred EeCCCCEEEEEeCCCCcHHHHHHHHHHhcCC----CCCCEEEEEeCCceEecCCcccCC---CcCCCCCccccccccccc
Confidence 4778999999999999999999999999666 999999999999999999997543 355678999999864 66
Q ss_pred cCCCeEEEEecC-CCCCCCccceEEecCCCCCCCC--------ceEEEEEEcCHHHHHHhhcCCCCC----CCCCCCCeE
Q 024387 191 HVGPGVLSMANA-GPNTNGSQFFICTVKTPWLDNR--------HVVFGHVIDGMDVVRKLESVETSR----TDYPKVPCR 257 (268)
Q Consensus 191 h~~~G~lsma~~-gp~s~gSqFfItl~~~~~LDg~--------~~VFG~VveGmdvL~~I~~~~td~----~~~P~~~I~ 257 (268)
| .+|+|+||+. +|++++|||||++.+.++||++ |+|||+|++|||||++|++++++. +++|.++|+
T Consensus 78 ~-~~G~lsmA~~~~p~s~gSQFfI~~~~~~~Ld~~~~~~~~~~~tvFG~Vv~G~dvv~~I~~~~t~~~~~~~~~P~~~v~ 156 (164)
T 1lop_A 78 N-TRGTLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGYCVFAEVVDGMDEVDKIKGVATGRSGMHQDVPKEDVI 156 (164)
T ss_dssp C-CTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTSCCCEEEEEEECHHHHHHHHTSCEEEETTEEEEESSCCE
T ss_pred c-CccEEEEeecCCCCCccceEEEEcCCccccCCccccccCCceEEEEEEecCHHHHHHHHhCCcCCccccCCCcCCCeE
Confidence 6 6999999974 8999999999999999999998 999999999999999999999875 589999999
Q ss_pred EEeeeEec
Q 024387 258 IINSGELP 265 (268)
Q Consensus 258 I~~cGvL~ 265 (268)
|.+|++++
T Consensus 157 I~~~~v~~ 164 (164)
T 1lop_A 157 IESVTVSE 164 (164)
T ss_dssp EEEEEECC
T ss_pred EEEEEEeC
Confidence 99999985
No 34
>3bkp_A Cyclophilin; malaria, isomerase, structural GENO structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=1.5e-43 Score=315.47 Aligned_cols=162 Identities=35% Similarity=0.571 Sum_probs=145.6
Q ss_pred ccccccccceEEEEEEECCeeeeeEEEEEcCCCChHHHHHHHHHHhcCCCCcccCCCEEEEEEcCceeeeCCCcCCCCCC
Q 024387 94 VELQAKVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTAGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTG 173 (268)
Q Consensus 94 ~~~~~~~~~~v~fDi~i~~t~~GrIvIeL~~d~aP~tv~nF~~Lc~~G~kg~gY~g~~f~Rvi~~f~iqgGd~~~~~g~g 173 (268)
....+..+.+|+|+. ++|+|+||||++.||+||+||++||+.|+ |+|+.||||+++|||||||++ ++|+|
T Consensus 14 ~~~~p~~~~~V~l~T-----~~G~I~ieL~~d~aP~tv~NF~~L~~~g~----Ydgt~FhRVi~~FmiQgGdp~-~~G~G 83 (232)
T 3bkp_A 14 LYFQGSTRGKVVLHT-----SLGDLDVELWARECPLACRNFVQLCLEGY----YVNTIFHRVVKDFIVQGGDPT-GTGRG 83 (232)
T ss_dssp GGCCCSCBCEEEEEE-----TTEEEEEEEBTTTCHHHHHHHHHHHHHTT----TTTCBEEEEETTTEEEECCTT-SSSSC
T ss_pred ccccCCCCCEEEEEE-----CCCcEEEEEcCCCCcHHHHHHHHHhhcCc----cCCCEEEEEeCCCEEEcCCCC-CCCCC
Confidence 344555677887754 56999999999999999999999999776 999999999999999999987 78999
Q ss_pred Ccccc--CCCCCCCcc-ccccCCCeEEEEecCCC--------------CCCCccceEEecCCCCCCCCceEEEEEEcCHH
Q 024387 174 GISIY--GSSFEDESF-VLKHVGPGVLSMANAGP--------------NTNGSQFFICTVKTPWLDNRHVVFGHVIDGMD 236 (268)
Q Consensus 174 g~s~~--g~~~~de~~-~l~h~~~G~lsma~~gp--------------~s~gSqFfItl~~~~~LDg~~~VFG~VveGmd 236 (268)
+.++| |..|++|.. .++|+.+|+|+||+.++ ++++||||||+.+.++||++|+|||+|+ ||+
T Consensus 84 g~si~~~g~~f~dE~~~~l~h~~~G~lsMA~~g~~~~~~~n~e~g~~~~sngSQFFIt~~~~p~LDg~~tVFG~Vv-g~~ 162 (232)
T 3bkp_A 84 GADTTFDGKPFDVETHPRLKFRYRGLVGVANLGRSSKDAENDERGRSLGTNGNQFFITLARADVLNNAYTLFGKVT-GHT 162 (232)
T ss_dssp CCCCTTTTCCBCCCCCTTCCCCSTTEEEECCCC----------------CBCSCEEEESSCCGGGTTTSCEEEEEC-GGG
T ss_pred CCccccCCCccCCccccCcCcCCCeEEEEeccCCcccccccccccccCCCcCCEEEEECCCCcccCCCccEEEEEE-eCc
Confidence 99999 899999985 78899999999999987 6999999999999999999999999999 776
Q ss_pred H--HHHhhcCCCCCCCCCCCCeEEEeeeEecC
Q 024387 237 V--VRKLESVETSRTDYPKVPCRIINSGELPL 266 (268)
Q Consensus 237 v--L~~I~~~~td~~~~P~~~I~I~~cGvL~~ 266 (268)
| |++|++++++.+++|.++|+|.+|++|..
T Consensus 163 v~~v~kI~~~~t~~~~~P~~~i~I~~~~vl~d 194 (232)
T 3bkp_A 163 LYNLMKFNDLEVGKEDRPMTPPFIKSVDVLWN 194 (232)
T ss_dssp HHHHHHHTTSCBCGGGCBSSCCBEEEEEEEEC
T ss_pred hHHHHHHHcCCcCCCCCcCCCeEEEEEEEEcC
Confidence 5 89999999999999999999999999963
No 35
>3s6m_A Peptidyl-prolyl CIS-trans isomerase; seattle structural genomics center for infectious disease; 1.65A {Burkholderia pseudomallei} SCOP: b.62.1.1 PDB: 3t1u_A*
Probab=100.00 E-value=3.5e-43 Score=298.86 Aligned_cols=145 Identities=33% Similarity=0.519 Sum_probs=130.7
Q ss_pred CeeeeeEEEEEcCCCChHHHHHHHHHHhcCCCCcccCCCEEEEEEcCceeeeCCCcCCCCCCCccccCCCCCCCcc-ccc
Q 024387 112 GKPAGRIVMGLFGDVVPKTAENFRALCTAGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGSSFEDESF-VLK 190 (268)
Q Consensus 112 ~t~~GrIvIeL~~d~aP~tv~nF~~Lc~~G~kg~gY~g~~f~Rvi~~f~iqgGd~~~~~g~gg~s~~g~~~~de~~-~l~ 190 (268)
.|++|+|+||||++.||+||+||++||+.|+ |+|+.|||++++|||||||++...+ ...++..+++|.. .++
T Consensus 9 ~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~----Y~g~~FhRvi~~f~iQgGd~~~~~~---~~~~~~~~~~E~~~~l~ 81 (167)
T 3s6m_A 9 HTNHGVIKLELDEAKAPKTVENFLNYVKKGH----YDGTIFHRVINGFMIQGGGFEPGLK---QKPTDAPIANEANNGLK 81 (167)
T ss_dssp EETTEEEEEEECTTTCHHHHHHHHHHHHHTT----TTTEECCEEETTTEEEESSEETTTE---ECCCCCCBCCCGGGCCC
T ss_pred EeCCceEEEEEeCCCCcHHHHHHHHHhhhcc----cCCCEeEEecCCcEEEeccccCCCC---CCCCCCccCCccccccc
Confidence 3788999999999999999999999999776 9999999999999999999875432 2345777888864 455
Q ss_pred cCCCeEEEEec-CCCCCCCccceEEecCCCCCCCC--------ceEEEEEEcCHHHHHHhhcCCCCC----CCCCCCCeE
Q 024387 191 HVGPGVLSMAN-AGPNTNGSQFFICTVKTPWLDNR--------HVVFGHVIDGMDVVRKLESVETSR----TDYPKVPCR 257 (268)
Q Consensus 191 h~~~G~lsma~-~gp~s~gSqFfItl~~~~~LDg~--------~~VFG~VveGmdvL~~I~~~~td~----~~~P~~~I~ 257 (268)
| .+|+|+||| .+|++++|||||++.+.+|||++ |+|||+|++|||||++|++++++. +++|.++|+
T Consensus 82 ~-~~G~lsmA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~~~~~VFG~Vv~G~dvv~~I~~~~t~~~~~~~~~P~~~v~ 160 (167)
T 3s6m_A 82 N-DTYTIAMARTNDPHSATAQFFINVNDNEFLNHSSPTPQGWGYAVFGKVVEGQDIVDKIKAVKTGSKGFHQDVPNDDVV 160 (167)
T ss_dssp C-CTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTCCCCEEEEEEECHHHHHHHTTSCBBC---CBTCBSSCCE
T ss_pred C-CccEEEEecCCCCCCccceEEEEcCCchhcCCcccccCCCCceEEEEEEcCHHHHHHHHcCCcCCCcccCCCcCCCeE
Confidence 5 799999999 68999999999999999999998 999999999999999999999987 689999999
Q ss_pred EEeeeEe
Q 024387 258 IINSGEL 264 (268)
Q Consensus 258 I~~cGvL 264 (268)
|.+|.+|
T Consensus 161 I~~~~il 167 (167)
T 3s6m_A 161 IEKAVVV 167 (167)
T ss_dssp EEEEEEC
T ss_pred EEEEEEC
Confidence 9999886
No 36
>3rfy_A Peptidyl-prolyl CIS-trans isomerase CYP38, chloro; cyclophilin, peptidyl prolyl isomerase, ppiase, TLP,; 2.39A {Arabidopsis thaliana}
Probab=100.00 E-value=1.1e-36 Score=286.33 Aligned_cols=141 Identities=28% Similarity=0.383 Sum_probs=120.5
Q ss_pred ccccceEEEEEEEC--C---eeeeeEEEEEcCCCChHHHHHHHHHHhcCCCCcccCCCEEEEEEcCceeeeCCCcCCCCC
Q 024387 98 AKVTTKVFFDVDIG--G---KPAGRIVMGLFGDVVPKTAENFRALCTAGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGT 172 (268)
Q Consensus 98 ~~~~~~v~fDi~i~--~---t~~GrIvIeL~~d~aP~tv~nF~~Lc~~G~kg~gY~g~~f~Rvi~~f~iqgGd~~~~~g~ 172 (268)
|..+.++++++.+. + +..|+|+||||++.||+||+||++||+.|+ |+|+.|||+ ++|||||||++ ++|+
T Consensus 165 P~l~gra~V~m~t~~~~~~~~~~G~I~IeL~~d~AP~Tv~NFl~L~~~Gf----YdGt~FHRV-~gFmIQgGDp~-g~G~ 238 (369)
T 3rfy_A 165 PLLKGRASVDMKVKIKDNPNIEDCVFRIVLDGYNAPVTAGNFVDLVERHF----YDGMEIQRS-DGFVVQTGDPE-GPAE 238 (369)
T ss_dssp CEECSEEEEEEEEECCSCSSCSEEEEEEEEETTTCHHHHHHHHHHHHTTT----TTTEECEEE-EEEEECCCCCC-CCCS
T ss_pred ccCCCCeEEEEEEeccCCCcccceEEEEEEeCCCCcHHHHHHHHHhhcCC----cCCCeeeee-CCeeEecCCCC-CCCC
Confidence 34455555555553 2 468999999999999999999999999666 999999999 99999999997 5555
Q ss_pred C---------------------CccccCCCCCCCcc-----ccccCCCeEEEEecC--CCCCCCccceEEec-------C
Q 024387 173 G---------------------GISIYGSSFEDESF-----VLKHVGPGVLSMANA--GPNTNGSQFFICTV-------K 217 (268)
Q Consensus 173 g---------------------g~s~~g~~~~de~~-----~l~h~~~G~lsma~~--gp~s~gSqFfItl~-------~ 217 (268)
| +.++|+..|++|++ .++|+.+|+|+|||. +||+++|||||++. +
T Consensus 239 G~~~~~~g~~~~iP~E~~~~G~g~piyg~~fedegf~~~~~~L~h~~~G~LsMAns~~gPnSngSQFFItl~d~~L~~~~ 318 (369)
T 3rfy_A 239 GFIDPSTEKTRTVPLEIMVTGEKTPFYGSTLEELGLYKAQVVIPFNAFGTMAMAREEFENDSGSSQVFWLLKESELTPSN 318 (369)
T ss_dssp CCCSCCCCCCCSSSSSSCSSSSCCSCCCSSTGGGTEEEEEEEECCCCCCCCCCSSCCCCCCCSSCCCCCCCEEEEECSCC
T ss_pred CccCcccCcCcccCccccccCCCCCcCCCccccccccccccccccCCCceEEEeecCCCCCCccceEEEEecccccCCCC
Confidence 5 35677878888754 678889999999997 89999999999994 6
Q ss_pred CCCCCCCceEEEEEEcCHHHHHHhhcC
Q 024387 218 TPWLDNRHVVFGHVIDGMDVVRKLESV 244 (268)
Q Consensus 218 ~~~LDg~~~VFG~VveGmdvL~~I~~~ 244 (268)
.+|||++|+|||+|++|||||++|++.
T Consensus 319 ~~~LDgkytVFG~VveGmdVVdkI~~G 345 (369)
T 3rfy_A 319 SNILDGRYAVFGYVTDNEDFLADLKVG 345 (369)
T ss_dssp CSSSCSCEEEEEEEEESTTGGGGCCTT
T ss_pred CcccCCCeeEEEEEecCHHHHHHHhCC
Confidence 899999999999999999999999884
No 37
>3kop_A Uncharacterized protein; protein with A cyclophilin-like fold, structural genomics, J center for structural genomics, JCSG; 1.90A {Arthrobacter SP}
Probab=94.50 E-value=0.17 Score=42.82 Aligned_cols=33 Identities=18% Similarity=0.354 Sum_probs=26.0
Q ss_pred EEEEEECCeeee-eEEEEEcCCCChHHHHHHHHHHh
Q 024387 105 FFDVDIGGKPAG-RIVMGLFGDVVPKTAENFRALCT 139 (268)
Q Consensus 105 ~fDi~i~~t~~G-rIvIeL~~d~aP~tv~nF~~Lc~ 139 (268)
|+.|++.. .| .++.+|..+.||+||+.|+++--
T Consensus 23 ~i~itl~~--~g~~~~A~Lldd~APkTcaA~~~~LP 56 (188)
T 3kop_A 23 YINITLEK--RGVTCKALLLDDVAPRTSKAVWDALP 56 (188)
T ss_dssp EEEEEETT--TTEEEEEEECTTTSHHHHHHHHHHCC
T ss_pred EEEEEEec--CCeEEEEEEccccChHHHHHHHHhCC
Confidence 56677642 34 38899999999999999999754
No 38
>2nnz_A Hypothetical protein; beta-barrel, structural genomics, ontario centre for structu proteomics, OCSP, unknown function; NMR {Archaeoglobus fulgidus}
Probab=90.95 E-value=0.24 Score=40.80 Aligned_cols=105 Identities=18% Similarity=0.187 Sum_probs=59.4
Q ss_pred EEEECCeeeeeEEEEEcCCCChHHHHHHHHHHhcCCCCcccCCCEEEEEEcCceeeeCCCcCCCCCCCccccCCCCCCCc
Q 024387 107 DVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTAGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGSSFEDES 186 (268)
Q Consensus 107 Di~i~~t~~GrIvIeL~~d~aP~tv~nF~~Lc~~G~kg~gY~g~~f~Rvi~~f~iqgGd~~~~~g~gg~s~~g~~~~de~ 186 (268)
.|.+++ ..++++|+.+.||+||+.|+++.= +... +.+. .+- +-+ +... .-..+ |+
T Consensus 33 ~i~~~~---~~~~a~L~D~~aP~Ta~~f~~~LP-------l~~~-~~~~-g~E-~y~-~lp~----------~l~~~-en 87 (153)
T 2nnz_A 33 RIRFES---AECEVELYEEWAPETVRAIADALP-------IKST-ANRW-GDE-IYF-TTQV----------AVEKE-EN 87 (153)
T ss_dssp EEEETT---EEEEECCCTTSCHHHHHHHHHTCS-------EEEE-EEEE-TTE-EEE-CCSC----------CCCCS-SC
T ss_pred EEEECC---EEEEEEEcCCCCHHHHHHHHHhCC-------cEEE-HHhh-CCc-EEE-ECCC----------CCCCC-CC
Confidence 455665 669999999999999999999754 2221 1121 110 000 1110 00111 22
Q ss_pred cccccCCCeEEEEecCCCCCCCccceEEecCCCCCCC------CceEEEEEEcCHHHHHHhh
Q 024387 187 FVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDN------RHVVFGHVIDGMDVVRKLE 242 (268)
Q Consensus 187 ~~l~h~~~G~lsma~~gp~s~gSqFfItl~~~~~LDg------~~~VFG~VveGmdvL~~I~ 242 (268)
. .....+|-|++-..+. .+.|-.++.+...+ .-.+||+|++|++.|.++.
T Consensus 88 ~-~~~~~~GDI~Yy~pg~-----~LaIFYg~~p~s~~e~~~as~~~~lG~I~~gle~L~~~~ 143 (153)
T 2nnz_A 88 S-KDVVELGDVAYWIPGK-----AICLFFGKTPISDDKIRPASAVNVIGRIVNSMEGLKGVA 143 (153)
T ss_dssp C-BCCCCTTEEEEETTTT-----EEEEESSCCTTCTTSCCCCSSEEEEEECCSCCCCGGGCC
T ss_pred C-cccCCCCeEEEeCCCC-----EEEEEECCccccccccccccccEEEEEEccCHHHHhhCC
Confidence 2 2334678888765432 26666666543222 2588999999988776653
No 39
>1zx8_A Hypothetical protein TM1367; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: 1PE; 1.90A {Thermotoga maritima} SCOP: b.62.1.3 PDB: 2ka0_A
Probab=52.43 E-value=29 Score=27.64 Aligned_cols=95 Identities=16% Similarity=0.180 Sum_probs=52.0
Q ss_pred eeEEEEEcCCCChHHHHHHHHHHhc-CCCCcccCCCEEEEEEcCceeeeCCCcCCCCCCCccccCCCCC-CCccccccCC
Q 024387 116 GRIVMGLFGDVVPKTAENFRALCTA-GEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGSSFE-DESFVLKHVG 193 (268)
Q Consensus 116 GrIvIeL~~d~aP~tv~nF~~Lc~~-G~kg~gY~g~~f~Rvi~~f~iqgGd~~~~~g~gg~s~~g~~~~-de~~~l~h~~ 193 (268)
..+..+|+.. |.|++.|+++.-- +.-. .|. .-++-..|.. .+ +|+. ..-..
T Consensus 22 ~~v~a~L~Dn--p~Ta~~~~~~LPl~~~~~-~~g-~E~y~~~p~~----------------------l~~~e~~-~~~~~ 74 (136)
T 1zx8_A 22 GKCVIDLNEE--YEVVKLLKEKIPFESVVN-TWG-EEIYFSTPVN----------------------VQKMENP-REVVE 74 (136)
T ss_dssp CEEEEEEETT--SHHHHHHHHHCSEEEECE-ESS-SEEEEECSCC----------------------CCCCSSE-ESSBC
T ss_pred cEEEEEEcCC--HHHHHHHHHHCCcEEEHH-HhC-CcEEEECCcc----------------------CCCCCCC-CccCC
Confidence 5688999755 7899999998541 0000 132 2222222211 11 1111 12235
Q ss_pred CeEEEEecCCCCCCCccceEEecCCCCCCC------CceEEEEEEcCHHHHHHhh
Q 024387 194 PGVLSMANAGPNTNGSQFFICTVKTPWLDN------RHVVFGHVIDGMDVVRKLE 242 (268)
Q Consensus 194 ~G~lsma~~gp~s~gSqFfItl~~~~~LDg------~~~VFG~VveGmdvL~~I~ 242 (268)
.|-|++-..+. -|-|-.++.|...+ .-.+||+|.+|++.|..+.
T Consensus 75 ~GDIaYw~pgg-----~LaIFyg~~p~s~~e~~~a~~v~~lGrI~~~l~~l~~v~ 124 (136)
T 1zx8_A 75 IGDVGYWPPGK-----ALCLFFGKTPMSDDKIQPASAVNVIGKIVEGLEDLKKIK 124 (136)
T ss_dssp TTEEEEEGGGT-----EEEEESSCCTTCSSSBCCSSCEEEEEEEEECGGGGGGCC
T ss_pred CCcEEEeCCCC-----EEEEEeCCCccccCccccCcCcEEEEEEccCHHHHhhCC
Confidence 77777765443 25555566543332 3689999999987776553
Done!