BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024390
(268 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1AK2|A Chain A, Adenylate Kinase Isoenzyme-2
pdb|2AK2|A Chain A, Adenylate Kinase Isoenzyme-2
Length = 233
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 71/135 (52%), Gaps = 7/135 (5%)
Query: 74 ERRRGVHWAFIGSPRAKKHVYAEMLSKLLEVPRISMSSIVRQDLSPRSSLHKQIANAVNR 133
E +GV +G P A K A L+K V ++ ++R ++ S L K++ ++
Sbjct: 12 ESPKGVRAVLLGPPGAGKGTQAPKLAKNFCVCHLATGDMLRAMVASGSELGKKLKATMDA 71
Query: 134 GEVVSEDIIFGLLSKRLEDGYYRGEIGFILDGLPRSRIQAEILDQLAE-----IDLVVNF 188
G++VS++++ L+ K LE + GF+LDG PR+ QAE+LD L E +D V+ F
Sbjct: 72 GKLVSDEMVLELIEKNLETPPCKN--GFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEF 129
Query: 189 KCADNFIVTNRGGSL 203
D+ ++ G L
Sbjct: 130 SIPDSLLIRRITGRL 144
>pdb|2C9Y|A Chain A, Structure Of Human Adenylate Kinase 2
Length = 242
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 71/135 (52%), Gaps = 7/135 (5%)
Query: 74 ERRRGVHWAFIGSPRAKKHVYAEMLSKLLEVPRISMSSIVRQDLSPRSSLHKQIANAVNR 133
E +G+ +G P A K A L++ V ++ ++R ++ S L K++ ++
Sbjct: 12 EYPKGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDA 71
Query: 134 GEVVSEDIIFGLLSKRLEDGYYRGEIGFILDGLPRSRIQAEILDQLAE-----IDLVVNF 188
G++VS++++ L+ K LE + GF+LDG PR+ QAE+LD L E +D V+ F
Sbjct: 72 GKLVSDEMVVELIEKNLETPLCKN--GFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEF 129
Query: 189 KCADNFIVTNRGGSL 203
D+ ++ G L
Sbjct: 130 SIPDSLLIRRITGRL 144
>pdb|2RGX|A Chain A, Crystal Structure Of Adenylate Kinase From Aquifex
Aeolicus In Complex With Ap5a
pdb|2RH5|A Chain A, Structure Of Apo Adenylate Kinase From Aquifex Aeolicus
pdb|2RH5|C Chain C, Structure Of Apo Adenylate Kinase From Aquifex Aeolicus
pdb|2RH5|B Chain B, Structure Of Apo Adenylate Kinase From Aquifex Aeolicus
pdb|3SR0|A Chain A, Crystal Structure Of The Phosphoryl Transfer Transition
State Mimic In The Adenylate Kinase: AdpALF4AMP IN THE
ACTIVE SITE
pdb|3SR0|B Chain B, Crystal Structure Of The Phosphoryl Transfer Transition
State Mimic In The Adenylate Kinase: AdpALF4AMP IN THE
ACTIVE SITE
Length = 206
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 83/196 (42%), Gaps = 44/196 (22%)
Query: 81 WAFIGSPRAKKHVYAEMLSKLLEVPRISMSSIVRQDLSPRSSLHKQIANAVNRGEVVSED 140
F+G P A K A+ L+K IS I+R+ + + L K+ + RGE+V +D
Sbjct: 3 LVFLGPPGAGKGTQAKRLAKEKGFVHISTGDILREAVQKGTPLGKKAKEYMERGELVPDD 62
Query: 141 IIFGLLSKRLEDGYYRGEIGFILDGLPRSRIQAEILDQLAE-----IDLVVNFKCADNFI 195
+I L+ + + I DG PR+ QAE LD++ E +D V+ F+ D +
Sbjct: 63 LIIALIEE-----VFPKHGNVIFDGFPRTVKQAEALDEMLEKKGLKVDHVLLFEVPDEVV 117
Query: 196 VTNRGGS---------------------------------LKEKLEAYAELSKPLEDYYQ 222
+ G +K++LE Y E + PL +YY
Sbjct: 118 IERLSGRRINPETGEVYHVKYNPPPPGVKVIQREDDKPEVIKKRLEVYREQTAPLIEYY- 176
Query: 223 KQKKLLEFQVGSAPVE 238
K+K +L S PVE
Sbjct: 177 KKKGILRIIDASKPVE 192
>pdb|3HPR|A Chain A, Crystal Structure Of V148g Adenylate Kinase From E. Coli,
In Complex With Ap5a
pdb|3HPR|B Chain B, Crystal Structure Of V148g Adenylate Kinase From E. Coli,
In Complex With Ap5a
Length = 214
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 63/115 (54%), Gaps = 3/115 (2%)
Query: 83 FIGSPRAKKHVYAEMLSKLLEVPRISMSSIVRQDLSPRSSLHKQIANAVNRGEVVSEDII 142
+G+P A K A+ + + +P+IS ++R + S L KQ + ++ G++V+++++
Sbjct: 5 LLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSELGKQAKDIMDAGKLVTDELV 64
Query: 143 FGLLSKRLEDGYYRGEIGFILDGLPRSRIQAEILDQLA-EIDLVVNFKCADNFIV 196
L+ +R+ R GF+LDG PR+ QA+ + + +D V+ F D IV
Sbjct: 65 IALVKERIAQEDCRN--GFLLDGFPRTIPQADAMKEAGINVDYVLEFDVPDELIV 117
>pdb|1AKE|A Chain A, Structure Of The Complex Between Adenylate Kinase From
Escherichia Coli And The Inhibitor Ap5a Refined At 1.9
Angstroms Resolution: A Model For A Catalytic Transition
State
pdb|1AKE|B Chain B, Structure Of The Complex Between Adenylate Kinase From
Escherichia Coli And The Inhibitor Ap5a Refined At 1.9
Angstroms Resolution: A Model For A Catalytic Transition
State
pdb|1ANK|A Chain A, The Closed Conformation Of A Highly Flexible Protein: The
Structure Of E. Cloi Adenylate Kinase With Bound Amp And
Amppnp
pdb|1ANK|B Chain B, The Closed Conformation Of A Highly Flexible Protein: The
Structure Of E. Cloi Adenylate Kinase With Bound Amp And
Amppnp
pdb|4AKE|A Chain A, Adenylate Kinase
pdb|4AKE|B Chain B, Adenylate Kinase
pdb|2ECK|A Chain A, Structure Of Phosphotransferase
pdb|2ECK|B Chain B, Structure Of Phosphotransferase
pdb|3HPQ|A Chain A, Crystal Structure Of Wild-Type Adenylate Kinase From E.
Coli, In Complex With Ap5a
pdb|3HPQ|B Chain B, Crystal Structure Of Wild-Type Adenylate Kinase From E.
Coli, In Complex With Ap5a
Length = 214
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 63/115 (54%), Gaps = 3/115 (2%)
Query: 83 FIGSPRAKKHVYAEMLSKLLEVPRISMSSIVRQDLSPRSSLHKQIANAVNRGEVVSEDII 142
+G+P A K A+ + + +P+IS ++R + S L KQ + ++ G++V+++++
Sbjct: 5 LLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSELGKQAKDIMDAGKLVTDELV 64
Query: 143 FGLLSKRLEDGYYRGEIGFILDGLPRSRIQAEILDQLA-EIDLVVNFKCADNFIV 196
L+ +R+ R GF+LDG PR+ QA+ + + +D V+ F D IV
Sbjct: 65 IALVKERIAQEDCRN--GFLLDGFPRTIPQADAMKEAGINVDYVLEFDVPDELIV 117
>pdb|1E4V|A Chain A, Mutant G10v Of Adenylate Kinase From E. Coli, Modified In
The Gly-Loop
pdb|1E4V|B Chain B, Mutant G10v Of Adenylate Kinase From E. Coli, Modified In
The Gly-Loop
Length = 214
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 63/115 (54%), Gaps = 3/115 (2%)
Query: 83 FIGSPRAKKHVYAEMLSKLLEVPRISMSSIVRQDLSPRSSLHKQIANAVNRGEVVSEDII 142
+G+P A K A+ + + +P+IS ++R + S L KQ + ++ G++V+++++
Sbjct: 5 LLGAPVAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSELGKQAKDIMDAGKLVTDELV 64
Query: 143 FGLLSKRLEDGYYRGEIGFILDGLPRSRIQAEILDQLA-EIDLVVNFKCADNFIV 196
L+ +R+ R GF+LDG PR+ QA+ + + +D V+ F D IV
Sbjct: 65 IALVKERIAQEDCRN--GFLLDGFPRTIPQADAMKEAGINVDYVLEFDVPDELIV 117
>pdb|2CDN|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Adenylate
Kinase Complexed With Two Molecules Of Adp And Mg
Length = 201
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 83/169 (49%), Gaps = 18/169 (10%)
Query: 77 RGVHW--AFIGSPRAKKHVYAEMLSKLLEVPRISMSSIVRQDLSPRSSLHKQIANAVNRG 134
RG H +G P A K A L++ L +P+IS + R+++ + L + ++ G
Sbjct: 17 RGSHMRVLLLGPPGAGKGTQAVKLAEKLGIPQISTGELFRRNIEEGTKLGVEAKRYLDAG 76
Query: 135 EVVSEDIIFGLLSKRLEDGYYRGEIGFILDGLPRSRIQAEILDQLAE-----IDLVVNFK 189
++V D+ L+ RL + GFILDG PRS QA+ L ++ E ID V+ F+
Sbjct: 77 DLVPSDLTNELVDDRLNN--PDAANGFILDGYPRSVEQAKALHEMLERRGTDIDAVLEFR 134
Query: 190 CADNFIVTNRGGS---------LKEKLEAYAELSKPLEDYYQKQKKLLE 229
++ ++ G + +++ Y + + PL +YY+ Q K ++
Sbjct: 135 VSEEVLLERLKGRGRADDTDDVILNRMKVYRDETAPLLEYYRDQLKTVD 183
>pdb|1P4S|A Chain A, Solution Structure Of Mycobacterium Tuberculosis Adenylate
Kinase
Length = 181
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 80/161 (49%), Gaps = 16/161 (9%)
Query: 83 FIGSPRAKKHVYAEMLSKLLEVPRISMSSIVRQDLSPRSSLHKQIANAVNRGEVVSEDII 142
+G P A K A L++ L +P+IS + R+++ + L + ++ G++V D+
Sbjct: 5 LLGPPGAGKGTQAVKLAEKLGIPQISTGELFRRNIEEGTKLGVEAKRYLDAGDLVPSDLT 64
Query: 143 FGLLSKRLEDGYYRGEIGFILDGLPRSRIQAEILDQLAE-----IDLVVNFKCADNFIVT 197
L+ RL + GFILDG PRS QA+ L ++ E ID V+ F+ ++ ++
Sbjct: 65 NELVDDRLNN--PDAANGFILDGYPRSVEQAKALHEMLERRGTDIDAVLEFRVSEEVLLE 122
Query: 198 NRGGS---------LKEKLEAYAELSKPLEDYYQKQKKLLE 229
G + +++ Y + + PL +YY+ Q K ++
Sbjct: 123 RLKGRGRADDTDDVILNRMKVYRDETAPLLEYYRDQLKTVD 163
>pdb|1AKY|A Chain A, High-Resolution Structures Of Adenylate Kinase From Yeast
Ligated With Inhibitor Ap5a, Showing The Pathway Of
Phosphoryl Transfer
pdb|2AKY|A Chain A, High-Resolution Structures Of Adenylate Kinase From Yeast
Ligated With Inhibitor Ap5a, Showing The Pathway Of
Phosphoryl Transfer
Length = 220
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 81/214 (37%), Gaps = 46/214 (21%)
Query: 79 VHWAFIGSPRAKKHVYAEMLSKLLEVPRISMSSIVRQDLSPRSSLHKQIANAVNRGEVVS 138
+ IG P A K A L + ++ ++R ++ + L + +++G +VS
Sbjct: 5 IRMVLIGPPGAGKGTQAPNLQERFHAAHLATGDMLRSQIAKGTQLGLEAKKIMDQGGLVS 64
Query: 139 EDIIFGLLSKRLEDGYYRGEIGFILDGLPRSRIQAEILDQL-----AEIDLVVNFKCADN 193
+DI+ ++ L + + GFILDG PR+ QAE LDQ+ ++ + K D
Sbjct: 65 DDIMVNMIKDELTNNPA-CKNGFILDGFPRTIPQAEKLDQMLKEQGTPLEKAIELKVDDE 123
Query: 194 FIVTNRGG----------------------------------------SLKEKLEAYAEL 213
+V G +LK++L AY
Sbjct: 124 LLVARITGRLIHPASGRSYHKIFNPPKEDMKDDVTGEALVQRSDDNADALKKRLAAYHAQ 183
Query: 214 SKPLEDYYQKQKKLLEFQVGSAPVETWQGLLTAL 247
++P+ D+Y+K P W +L L
Sbjct: 184 TEPIVDFYKKTGIWAGVDASQPPATVWADILNKL 217
>pdb|3AKY|A Chain A, Stability, Activity And Structure Of Adenylate Kinase
Mutants
Length = 220
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 80/214 (37%), Gaps = 46/214 (21%)
Query: 79 VHWAFIGSPRAKKHVYAEMLSKLLEVPRISMSSIVRQDLSPRSSLHKQIANAVNRGEVVS 138
+ IG P A K A L + ++ ++R ++ + L + +++G +VS
Sbjct: 5 IRMVLIGPPGAGKGTQAPNLQERFHAAHLATGDMLRSQIAKGTQLGLEAKKIMDQGGLVS 64
Query: 139 EDIIFGLLSKRLEDGYYRGEIGFILDGLPRSRIQAEILDQL-----AEIDLVVNFKCADN 193
+DI+ ++ L + + GFILDG PR+ QAE LDQ+ ++ + K D
Sbjct: 65 DDIMVNMIKDELTNNPA-CKNGFILDGFPRTIPQAEKLDQMLKEQGTPLEKAIELKVDDE 123
Query: 194 FIVTNRGG----------------------------------------SLKEKLEAYAEL 213
+V G +LK++L AY
Sbjct: 124 LLVARITGRLIHPASGRSYHKIFNPPKEDMKDDVTGEALVQRSDDNADALKKRLAAYHAQ 183
Query: 214 SKPLEDYYQKQKKLLEFQVGSAPVETWQGLLTAL 247
++P+ D+Y+K P W L L
Sbjct: 184 TEPIVDFYKKTGIWAGVDASQPPATVWADFLNKL 217
>pdb|1E4Y|A Chain A, Mutant P9l Of Adenylate Kinase From E. Coli, Modified In
The Gly-Loop
pdb|1E4Y|B Chain B, Mutant P9l Of Adenylate Kinase From E. Coli, Modified In
The Gly-Loop
Length = 214
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 83 FIGSPRAKKHVYAEMLSKLLEVPRISMSSIVRQDLSPRSSLHKQIANAVNRGEVVSEDII 142
+G+ A K A+ + + +P+IS ++R + S L KQ + ++ G++V+++++
Sbjct: 5 LLGALVAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSELGKQAKDIMDAGKLVTDELV 64
Query: 143 FGLLSKRLEDGYYRGEIGFILDGLPRSRIQAEILDQLA-EIDLVVNFKCADNFIV 196
L+ +R+ R GF+LDG PR+ QA+ + + +D V+ F D IV
Sbjct: 65 IALVKERIAQEDCRN--GFLLDGFPRTIPQADAMKEAGINVDYVLEFDVPDELIV 117
>pdb|2BWJ|A Chain A, Structure Of Adenylate Kinase 5
pdb|2BWJ|B Chain B, Structure Of Adenylate Kinase 5
pdb|2BWJ|C Chain C, Structure Of Adenylate Kinase 5
pdb|2BWJ|D Chain D, Structure Of Adenylate Kinase 5
pdb|2BWJ|E Chain E, Structure Of Adenylate Kinase 5
pdb|2BWJ|F Chain F, Structure Of Adenylate Kinase 5
Length = 199
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 83/182 (45%), Gaps = 21/182 (11%)
Query: 83 FIGSPRAKKHVYAEMLSKLLEVPRISMSSIVRQDLSPRSSLHKQIANAVNRGEVVSEDII 142
IG P + K E L + +S ++R++L+ S K I + + RG++V I+
Sbjct: 17 IIGGPGSGKGTQCEKLVEKYGFTHLSTGELLREELASESERSKLIRDIMERGDLVPSGIV 76
Query: 143 FGLLSKRLED--GYYRGEIGFILDGLPRSRIQAEILDQ-LAEIDLVVNFKCADNFIVTNR 199
LL + + G RG F++DG PR Q E + + + LV+ C+ + +TNR
Sbjct: 77 LELLKEAMVASLGDTRG---FLIDGYPREVKQGEEFGRRIGDPQLVICMDCSAD-TMTNR 132
Query: 200 --------------GGSLKEKLEAYAELSKPLEDYYQKQKKLLEFQVGSAPVETWQGLLT 245
++ ++LEAY S P+ YY+ + +L + P + + L T
Sbjct: 133 LLQMSRSSLPVDDTTKTIAKRLEAYYRASIPVIAYYETKTQLHKINAEGTPEDVFLQLCT 192
Query: 246 AL 247
A+
Sbjct: 193 AI 194
>pdb|3TLX|A Chain A, Crystal Structure Of Pf10_0086, Adenylate Kinase From
Plasmodium Falciparum
pdb|3TLX|B Chain B, Crystal Structure Of Pf10_0086, Adenylate Kinase From
Plasmodium Falciparum
pdb|3TLX|C Chain C, Crystal Structure Of Pf10_0086, Adenylate Kinase From
Plasmodium Falciparum
pdb|3TLX|D Chain D, Crystal Structure Of Pf10_0086, Adenylate Kinase From
Plasmodium Falciparum
Length = 243
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 66/131 (50%), Gaps = 7/131 (5%)
Query: 81 WAFIGSPRAKKHVYAEMLSKLLEVPRISMSSIVRQDLSPRSSLHKQIANAVNRGEVVSED 140
+ F+G+P + K + L K +S ++R+ ++ L +I N +N G++V +
Sbjct: 32 YIFLGAPGSGKGTQSLNLKKSHCYCHLSTGDLLREAAEKKTELGLKIKNIINEGKLVDDQ 91
Query: 141 IIFGLLSKRLEDGYYRGEIGFILDGLPRSRIQAEILDQL-----AEIDLVVNFKCADNFI 195
++ L+ ++L+ + GFILDG PR+ QAE L++L ++D V F D +
Sbjct: 92 MVLSLVDEKLKTPQCKK--GFILDGYPRNVKQAEDLNKLLQKNQTKLDGVFYFNVPDEVL 149
Query: 196 VTNRGGSLKEK 206
V G L K
Sbjct: 150 VNRISGRLIHK 160
>pdb|3FB4|A Chain A, Crystal Structure Of Adenylate Kinase From Marinibacillus
Marinus
Length = 216
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 63/117 (53%), Gaps = 9/117 (7%)
Query: 79 VHWAFIGSPRAKKHVYAEMLSKLLEVPRISMSSIVRQDLSPRSSLHKQIANAVNRGEVVS 138
++ +G P A K AE + + E+P IS + R + + L + + +++G +V
Sbjct: 1 MNIVLMGLPGAGKGTQAEQIIEKYEIPHISTGDMFRAAIKNGTELGLKAKSFMDQGNLVP 60
Query: 139 EDIIFGLLSKRL-EDGYYRGEIGFILDGLPRSRIQAEILDQL-----AEIDLVVNFK 189
+++ G++ +RL +D + GF+LDG PR+ QA+ LD L ++D V+N K
Sbjct: 61 DEVTIGIVHERLSKDDCQK---GFLLDGFPRTVAQADALDSLLTDLGKKLDYVLNIK 114
>pdb|1ZIN|A Chain A, Adenylate Kinase With Bound Ap5a
pdb|1ZIO|A Chain A, Phosphotransferase
pdb|1ZIP|A Chain A, Bacillus Stearothermophilus Adenylate Kinase
Length = 217
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 3/105 (2%)
Query: 79 VHWAFIGSPRAKKHVYAEMLSKLLEVPRISMSSIVRQDLSPRSSLHKQIANAVNRGEVVS 138
++ +G P A K AE + +P IS + R + + L Q ++RG++V
Sbjct: 1 MNLVLMGLPGAGKGTQAEKIVAAYGIPHISTGDMFRAAMKEGTPLGLQAKQYMDRGDLVP 60
Query: 139 EDIIFGLLSKRLEDGYYRGEIGFILDGLPRSRIQAEILD-QLAEI 182
+++ G++ +RL + GF+LDG PR+ QAE L+ LA+I
Sbjct: 61 DEVTIGIVRERLSKDDCQN--GFLLDGFPRTVAQAEALETMLADI 103
>pdb|1UKY|A Chain A, Substrate Specificity And Assembly Of Catalytic Center
Derived From Two Structures Of Ligated Uridylate Kinase
pdb|1UKZ|A Chain A, Substrate Specificity And Assembly Of Catalytic Center
Derived From Two Structures Of Ligated Uridylate Kinase
Length = 203
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 81/180 (45%), Gaps = 15/180 (8%)
Query: 84 IGSPRAKKHVYAEMLSKLLEVPRISMSSIVRQDLSPRSSLHKQ-IANAVNRGEVVSEDII 142
+G P A K E L K +S ++R + S + + I N + G++V ++I
Sbjct: 21 LGGPGAGKGTQCEKLVKDYSFVHLSAGDLLRAEQGRAGSQYGELIKNCIKEGQIVPQEIT 80
Query: 143 FGLLSKRLEDGYYRGEIGFILDGLPRSRIQAEILDQ-LAEIDLVVNFKCADNFIVT---N 198
LL + D + F++DG PR QA ++ + E ++ F C ++ ++
Sbjct: 81 LALLRNAISDNVKANKHKFLIDGFPRKMDQAISFERDIVESKFILFFDCPEDIMLERLLE 140
Query: 199 RGG----------SLKEKLEAYAELSKPLEDYYQKQKKLLEFQVGSAPVETWQGLLTALH 248
RG S+K++ + E S P+ +Y++ + K++ + + + ++ + A+
Sbjct: 141 RGKTSGRSDDNIESIKKRFNTFKETSMPVIEYFETKSKVVRVRCDRSVEDVYKDVQDAIR 200
>pdb|1DVR|A Chain A, Structure Of A Mutant Adenylate Kinase Ligated With An
Atp- Analogue Showing Domain Closure Over Atp
pdb|1DVR|B Chain B, Structure Of A Mutant Adenylate Kinase Ligated With An
Atp- Analogue Showing Domain Closure Over Atp
Length = 220
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 80/214 (37%), Gaps = 46/214 (21%)
Query: 79 VHWAFIGSPRAKKHVYAEMLSKLLEVPRISMSSIVRQDLSPRSSLHKQIANAVNRGEVVS 138
+ IG P A K A L + ++ ++R ++ + L + +++G +VS
Sbjct: 5 IRMVLIGPPGAGKGTQAPNLQERFHAAHLATGDMLRSQIAKGTQLGLEAKKIMDQGGLVS 64
Query: 139 EDIIFGLLSKRLEDGYYRGEIGFILDGLPRSRIQAEILDQL-----AEIDLVVNFKCADN 193
+DI+ ++ L + + GFIL G PR+ QAE LDQ+ ++ + K D
Sbjct: 65 DDIMVNMIKDELTNNPA-CKNGFILVGFPRTIPQAEKLDQMLKEQGTPLEKAIELKVDDE 123
Query: 194 FIVTNRGG----------------------------------------SLKEKLEAYAEL 213
+V G +LK++L AY
Sbjct: 124 LLVARITGRLIHPASGRSYHKIFNPPKEDMKDDVTGEALVQISDDNADALKKRLAAYHAQ 183
Query: 214 SKPLEDYYQKQKKLLEFQVGSAPVETWQGLLTAL 247
++P+ D+Y+K P W +L L
Sbjct: 184 TEPIVDFYKKTGIWAGVDASQPPATVWADILNKL 217
>pdb|3CM0|A Chain A, Crystal Structure Of Adenylate Kinase From Thermus
Thermophilus Hb8
Length = 186
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 82/200 (41%), Gaps = 45/200 (22%)
Query: 78 GVHWAFIGSPRAKKHVYAEMLSKLLEVPRISMSSIVRQDLSPRSSLHKQIANAVNRGEVV 137
G F+G P A K A L++ L ++S I+R ++ + L +++ + RG++V
Sbjct: 4 GQAVIFLGPPGAGKGTQASRLAQELGFKKLSTGDILRDHVARGTPLGERVRPIMERGDLV 63
Query: 138 SEDIIFGLLSKRLEDGYYRGEIGFILDGLPRSRIQAEILDQL------------------ 179
+D+I L+ + L + I DG PR+ QAE LD+L
Sbjct: 64 PDDLILELIREELAE-------RVIFDGFPRTLAQAEALDRLLSETGTRLLGVVLVEVPE 116
Query: 180 ----------AEIDLVVNFKCADNFIVTNRGGSLKEKLEAYAELSKPLEDYYQKQKKLLE 229
AE++ + DN R +LE Y E ++PL YY+ + L
Sbjct: 117 EELVRRILRRAELE----GRSDDNEETVRR------RLEVYREKTEPLVGYYEARGVLKR 166
Query: 230 FQVGSAPVETWQGLLTALHL 249
P E + + AL +
Sbjct: 167 VDGLGTPDEVYARIRAALGI 186
>pdb|1S3G|A Chain A, Crystal Structure Of Adenylate Kinase From Bacillus
Globisporus
Length = 217
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 2/101 (1%)
Query: 79 VHWAFIGSPRAKKHVYAEMLSKLLEVPRISMSSIVRQDLSPRSSLHKQIANAVNRGEVVS 138
++ +G P A K A+ + + P IS + R + + L + + +++G +V
Sbjct: 1 MNIVLMGLPGAGKGTQADRIVEKYGTPHISTGDMFRAAIQEGTELGVKAKSFMDQGALVP 60
Query: 139 EDIIFGLLSKRLEDGYYRGEIGFILDGLPRSRIQAEILDQL 179
+++ G++ +RL + GF+LDG PR+ QAE LDQL
Sbjct: 61 DEVTIGIVRERLSKSDC--DNGFLLDGFPRTVPQAEALDQL 99
>pdb|3DL0|A Chain A, Crystal Structure Of Adenylate Kinase Variant Aklse3
pdb|3DL0|B Chain B, Crystal Structure Of Adenylate Kinase Variant Aklse3
Length = 216
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Query: 79 VHWAFIGSPRAKKHVYAEMLSKLLEVPRISMSSIVRQDLSPRSSLHKQIANAVNRGEVVS 138
++ +G P A K E + + +P IS + R + + L + + +++GE+V
Sbjct: 1 MNLVLMGLPGAGKGTQGERIVEKYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVP 60
Query: 139 EDIIFGLLSKRLEDGYYRGEIGFILDGLPRSRIQ 172
+++ G++ +RL G E GF+LDG PR+ Q
Sbjct: 61 DEVTIGIVKERL--GKDDCERGFLLDGFPRTVAQ 92
>pdb|2OSB|A Chain A, Crystal Structure Of A Thermostable Mutant Of Bacillus
Subtilis Adenylate Kinase (q16l/q199r/)
pdb|2OSB|B Chain B, Crystal Structure Of A Thermostable Mutant Of Bacillus
Subtilis Adenylate Kinase (q16l/q199r/)
Length = 216
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Query: 79 VHWAFIGSPRAKKHVYAEMLSKLLEVPRISMSSIVRQDLSPRSSLHKQIANAVNRGEVVS 138
++ +G P A K E + + +P IS + R + + L + + +++GE+V
Sbjct: 1 MNLVLMGLPGAGKGTLGERIVEDYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVP 60
Query: 139 EDIIFGLLSKRLEDGYYRGEIGFILDGLPRSRIQ 172
+++ G++ +RL G E GF+LDG PR+ Q
Sbjct: 61 DEVTIGIVKERL--GKDDCERGFLLDGFPRTVAQ 92
>pdb|1P3J|A Chain A, Adenylate Kinase From Bacillus Subtilis
Length = 217
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Query: 79 VHWAFIGSPRAKKHVYAEMLSKLLEVPRISMSSIVRQDLSPRSSLHKQIANAVNRGEVVS 138
++ +G P A K E + + +P IS + R + + L + + +++GE+V
Sbjct: 1 MNLVLMGLPGAGKGTQGERIVEDYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVP 60
Query: 139 EDIIFGLLSKRLEDGYYRGEIGFILDGLPRSRIQ 172
+++ G++ +RL G E GF+LDG PR+ Q
Sbjct: 61 DEVTIGIVKERL--GKDDCERGFLLDGFPRTVAQ 92
>pdb|2QAJ|A Chain A, Crystal Structure Of A Thermostable Mutant Of Bacillus
Subtilis Adenylate Kinase (Q199rG213E)
pdb|2QAJ|B Chain B, Crystal Structure Of A Thermostable Mutant Of Bacillus
Subtilis Adenylate Kinase (Q199rG213E)
Length = 217
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Query: 79 VHWAFIGSPRAKKHVYAEMLSKLLEVPRISMSSIVRQDLSPRSSLHKQIANAVNRGEVVS 138
++ +G P A K E + + +P IS + R + + L + + +++GE+V
Sbjct: 1 MNLVLMGLPGAGKGTQGERIVEDYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVP 60
Query: 139 EDIIFGLLSKRLEDGYYRGEIGFILDGLPRSRIQ 172
+++ G++ +RL G E GF+LDG PR+ Q
Sbjct: 61 DEVTIGIVKERL--GKDDCERGFLLDGFPRTVAQ 92
>pdb|2EU8|A Chain A, Crystal Structure Of A Thermostable Mutant Of Bacillus
Subtilis Adenylate Kinase (Q199r)
pdb|2EU8|B Chain B, Crystal Structure Of A Thermostable Mutant Of Bacillus
Subtilis Adenylate Kinase (Q199r)
Length = 216
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Query: 79 VHWAFIGSPRAKKHVYAEMLSKLLEVPRISMSSIVRQDLSPRSSLHKQIANAVNRGEVVS 138
++ +G P A K E + + +P IS + R + + L + + +++GE+V
Sbjct: 1 MNLVLMGLPGAGKGTQGERIVEDYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVP 60
Query: 139 EDIIFGLLSKRLEDGYYRGEIGFILDGLPRSRIQ 172
+++ G++ +RL G E GF+LDG PR+ Q
Sbjct: 61 DEVTIGIVKERL--GKDDCERGFLLDGFPRTVAQ 92
>pdb|2ORI|A Chain A, Crystal Structure Of A Thermostable Mutant Of Bacillus
Subtilis Adenylate Kinase (A193vQ199R)
pdb|2ORI|B Chain B, Crystal Structure Of A Thermostable Mutant Of Bacillus
Subtilis Adenylate Kinase (A193vQ199R)
Length = 216
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Query: 79 VHWAFIGSPRAKKHVYAEMLSKLLEVPRISMSSIVRQDLSPRSSLHKQIANAVNRGEVVS 138
++ +G P A K E + + +P IS + R + + L + + +++GE+V
Sbjct: 1 MNLVLMGLPGAGKGTQGERIVEDYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVP 60
Query: 139 EDIIFGLLSKRLEDGYYRGEIGFILDGLPRSRIQ 172
+++ G++ +RL G E GF+LDG PR+ Q
Sbjct: 61 DEVTIGIVKERL--GKDDCERGFLLDGFPRTVAQ 92
>pdb|2P3S|A Chain A, Crystal Structure Of A Thermostable Mutant Of Bacillus
Subtilis Adenylate Kinase (G214rQ199R)
Length = 217
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Query: 79 VHWAFIGSPRAKKHVYAEMLSKLLEVPRISMSSIVRQDLSPRSSLHKQIANAVNRGEVVS 138
++ +G P A K E + + +P IS + R + + L + + +++GE+V
Sbjct: 1 MNLVLMGLPGAGKGTQGERIVEDYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVP 60
Query: 139 EDIIFGLLSKRLEDGYYRGEIGFILDGLPRSRIQ 172
+++ G++ +RL G E GF+LDG PR+ Q
Sbjct: 61 DEVTIGIVKERL--GKDDCERGFLLDGFPRTVAQ 92
>pdb|2OO7|A Chain A, Crystal Structure Of A Thermostable Mutant Of Bacillus
Subtilis Adenylate Kinase (T179iQ199R)
pdb|2OO7|B Chain B, Crystal Structure Of A Thermostable Mutant Of Bacillus
Subtilis Adenylate Kinase (T179iQ199R)
Length = 217
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Query: 79 VHWAFIGSPRAKKHVYAEMLSKLLEVPRISMSSIVRQDLSPRSSLHKQIANAVNRGEVVS 138
++ +G P A K E + + +P IS + R + + L + + +++GE+V
Sbjct: 1 MNLVLMGLPGAGKGTQGERIVEDYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVP 60
Query: 139 EDIIFGLLSKRLEDGYYRGEIGFILDGLPRSRIQ 172
+++ G++ +RL G E GF+LDG PR+ Q
Sbjct: 61 DEVTIGIVKERL--GKDDCERGFLLDGFPRTVAQ 92
>pdb|2AK3|A Chain A, The Three-Dimensional Structure Of The Complex Between
Mitochondrial Matrix Adenylate Kinase And Its Substrate
Amp At 1.85 Angstroms Resolution
pdb|2AK3|B Chain B, The Three-Dimensional Structure Of The Complex Between
Mitochondrial Matrix Adenylate Kinase And Its Substrate
Amp At 1.85 Angstroms Resolution
Length = 226
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 82 AFIGSPRAKKHVYAEMLSKLLEVPRISMSSIVRQDLSPRSSLHKQIANAVNRGEVVSEDI 141
A +G+P + K + ++K E+ +S ++R ++ + + +++G+++ +D+
Sbjct: 10 AIMGAPGSGKGTVSSRITKHFELKHLSSGDLLRDNMLRGTEIGVLAKTFIDQGKLIPDDV 69
Query: 142 IFGLLSKRLEDGYYRGEIGFILDGLPRSRIQAEILDQLAEIDLVVNFKC 190
+ L+ L++ + ++LDG PR+ QAE LD+ +ID V+N
Sbjct: 70 MTRLVLHELKN---LTQYNWLLDGFPRTLPQAEALDRAYQIDTVINLNV 115
>pdb|3DKV|A Chain A, Crystal Structure Of Adenylate Kinase Variant Aklse1
Length = 217
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Query: 79 VHWAFIGSPRAKKHVYAEMLSKLLEVPRISMSSIVRQDLSPRSSLHKQIANAVNRGEVVS 138
++ +G P A K AE + + +P IS + R + + L + + +++GE+V
Sbjct: 1 MNIVLMGLPGAGKGTQAERIVEKYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVP 60
Query: 139 EDIIFGLLSKRLEDGYYRGEIGFILDGLPRSRIQ 172
+++ G++ +RL E GF+LDG PR+ Q
Sbjct: 61 DEVTIGIVRERLSKSDC--ERGFLLDGFPRTVAQ 92
>pdb|3BE4|A Chain A, Crystal Structure Of Cryptosporidium Parvum Adenylate
Kinase Cgd5_3360
Length = 217
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 61/119 (51%), Gaps = 7/119 (5%)
Query: 83 FIGSPRAKKHVYAEMLSKLLEVPRISMSSIVRQDLSPRSSLHKQIANAVNRGEVVSEDII 142
IG+P + K E + K + +S ++R+ + + + + + + G V ++I+
Sbjct: 10 LIGAPGSGKGTQCEFIKKEYGLAHLSTGDMLREAIKNGTKIGLEAKSIIESGNFVGDEIV 69
Query: 143 FGLLSKRLEDGYYRGEIGFILDGLPRSRIQAE----ILDQLAE-IDLVVNFKCADNFIV 196
GL+ ++ + G GF+LDG PR+ QAE IL ++ + + V+ F+ D+ I+
Sbjct: 70 LGLVKEKFDLGVCVN--GFVLDGFPRTIPQAEGLAKILSEIGDSLTSVIYFEIDDSEII 126
>pdb|3L0P|A Chain A, Crystal Structures Of Iron Containing Adenylate Kinase
From Desulfovibrio Gigas
pdb|3L0S|A Chain A, Crystal Structures Of Zinc, Cobalt And Iron Containing
Adenylate Kinase From Gram-Negative Bacteria
Desulfovibrio Gigas
pdb|3L0S|C Chain C, Crystal Structures Of Zinc, Cobalt And Iron Containing
Adenylate Kinase From Gram-Negative Bacteria
Desulfovibrio Gigas
Length = 223
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 54/107 (50%), Gaps = 4/107 (3%)
Query: 83 FIGSPRAKKHVYAEMLSKLLEVPRISMSSIVRQDLSPRSSLHKQIANAVNRGEVVSEDII 142
G + K ++ + I I R+ + + L K+ ++RG++V +DI
Sbjct: 5 IFGPNGSGKGTQGNLVKDKYSLAHIESGGIFREHIGGGTELGKKAKEFIDRGDLVPDDIT 64
Query: 143 FGLLSKRLEDGYYRGEIGFILDGLPRSRIQAE-ILDQLAEIDLVVNF 188
++ + LE +G+ G++LDG PR+ +QA+ + + L E + +NF
Sbjct: 65 IPMVLETLES---KGKDGWLLDGFPRNTVQAQKLFEALQEKGMKINF 108
>pdb|2XB4|A Chain A, Crystal Structures Of Zinc Containing Adenylate Kinase
From Desulfovibrio Gigas
Length = 223
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 54/107 (50%), Gaps = 4/107 (3%)
Query: 83 FIGSPRAKKHVYAEMLSKLLEVPRISMSSIVRQDLSPRSSLHKQIANAVNRGEVVSEDII 142
G + K ++ + I I R+ + + L K+ ++RG++V +DI
Sbjct: 5 IFGPNGSGKGTQGNLVKDKYSLAHIESGGIFREHIGGGTELGKKAKEFIDRGDLVPDDIT 64
Query: 143 FGLLSKRLEDGYYRGEIGFILDGLPRSRIQAE-ILDQLAEIDLVVNF 188
++ + LE +G+ G++LDG PR+ +QA+ + + L E + +NF
Sbjct: 65 IPMVLETLES---KGKDGWLLDGFPRNTVQAQKLFEALQEKGMKINF 108
>pdb|2AR7|A Chain A, Crystal Structure Of Human Adenylate Kinase 4, Ak4
pdb|2AR7|B Chain B, Crystal Structure Of Human Adenylate Kinase 4, Ak4
pdb|2BBW|A Chain A, Crystal Structure Of Human Adenylate Kinase 4 (Ak4) In
Complex With Diguanosine Pentaphosphate
pdb|2BBW|B Chain B, Crystal Structure Of Human Adenylate Kinase 4 (Ak4) In
Complex With Diguanosine Pentaphosphate
Length = 246
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 57/108 (52%), Gaps = 3/108 (2%)
Query: 82 AFIGSPRAKKHVYAEMLSKLLEVPRISMSSIVRQDLSPRSSLHKQIANAVNRGEVVSEDI 141
+G P + K + +++ + +S +R+++ + + + + + +V + +
Sbjct: 31 VILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKASTEVGEMAKQYIEKSLLVPDHV 90
Query: 142 IFGLLSKRLEDGYYRGEIGFILDGLPRSRIQAEILDQLAEIDLVVNFK 189
I L+ LE+ RG+ ++LDG PR+ QAE LD++ E+DLV++
Sbjct: 91 ITRLMMSELEN--RRGQ-HWLLDGFPRTLGQAEALDKICEVDLVISLN 135
Score = 28.9 bits (63), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Query: 74 ERRRGVHWAFIGSPRAKKHVYAEMLSKLLEVPRISMSSIVRQDLSPRSS 122
E RRG HW G PR AE L K+ EV + +I + L R S
Sbjct: 100 ENRRGQHWLLDGFPRTLGQ--AEALDKICEVDLVISLNIPFETLKDRLS 146
>pdb|3NDP|A Chain A, Crystal Structure Of Human Ak4(L171p)
pdb|3NDP|B Chain B, Crystal Structure Of Human Ak4(L171p)
Length = 231
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 57/107 (53%), Gaps = 3/107 (2%)
Query: 82 AFIGSPRAKKHVYAEMLSKLLEVPRISMSSIVRQDLSPRSSLHKQIANAVNRGEVVSEDI 141
+G P + K + +++ + +S +R+++ + + + + + +V + +
Sbjct: 9 VILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKASTEVGEMAKQYIEKSLLVPDHV 68
Query: 142 IFGLLSKRLEDGYYRGEIGFILDGLPRSRIQAEILDQLAEIDLVVNF 188
I L+ LE+ RG+ ++LDG PR+ QAE LD++ E+DLV++
Sbjct: 69 ITRLMMSELEN--RRGQ-HWLLDGFPRTLGQAEALDKICEVDLVISL 112
Score = 28.5 bits (62), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Query: 74 ERRRGVHWAFIGSPRAKKHVYAEMLSKLLEVPRISMSSIVRQDLSPRSS 122
E RRG HW G PR AE L K+ EV + +I + L R S
Sbjct: 78 ENRRGQHWLLDGFPRTLGQ--AEALDKICEVDLVISLNIPFETLKDRLS 124
>pdb|3GMT|A Chain A, Crystal Structure Of Adenylate Kinase From Burkholderia
Pseu
pdb|3GMT|B Chain B, Crystal Structure Of Adenylate Kinase From Burkholderia
Pseu
Length = 230
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 54/109 (49%), Gaps = 9/109 (8%)
Query: 83 FIGSPRAKKHVYAEMLSKLLEVPRISMSSIVRQDLSPRSSLHKQIANAVNRGEVVSEDII 142
+G+P A K A + + +P+IS +R + + L + + G++V + +I
Sbjct: 13 LLGAPGAGKGTQANFIKEKFGIPQISTGDXLRAAVKAGTPLGVEAKTYXDEGKLVPDSLI 72
Query: 143 FGLLSKRLEDGYYRGEIGFILDGLPRSRIQAE-------ILDQLAEIDL 184
GL+ +RL++ G++ DG PR+ QA+ +D + EID+
Sbjct: 73 IGLVKERLKEADCAN--GYLFDGFPRTIAQADAXKEAGVAIDYVLEIDV 119
>pdb|1ZD8|A Chain A, Structure Of Human Adenylate Kinase 3 Like 1
Length = 227
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/199 (19%), Positives = 85/199 (42%), Gaps = 44/199 (22%)
Query: 82 AFIGSPRAKKHVYAEMLSKLLEVPRISMSSIVRQDLSPRSSLHKQIANAVNRGEVVSEDI 141
+G+P + K + ++ E+ +S ++R ++ + + +++G+++ +D+
Sbjct: 11 VIMGAPGSGKGTVSSRITTHFELKHLSSGDLLRDNMLRGTEIGVLAKAFIDQGKLIPDDV 70
Query: 142 IFGLLSKRLEDGYYRGEIGFILDGLPRSRIQAEILDQLAEIDLVVNFKCADNFIVT---- 197
+ L L++ + ++LDG PR+ QAE LD+ +ID V+N I
Sbjct: 71 MTRLALHELKN---LTQYSWLLDGFPRTLPQAEALDRAYQIDTVINLNVPFEVIKQRLTA 127
Query: 198 ------------------------------------NRGGSLKEKLEAYAELSKPLEDYY 221
++ ++ ++L+AY + +KP+ +YY
Sbjct: 128 RWIHPASGRVYNIEFNPPKTVGIDDLTGEPLIQREDDKPETVIKRLKAYEDQTKPVLEYY 187
Query: 222 QKQKKLLEFQVGSAPVETW 240
QK K +LE G+ + W
Sbjct: 188 QK-KGVLETFSGTETNKIW 205
>pdb|1ZAK|A Chain A, Adenylate Kinase From Maize In Complex With The Inhibitor
P1,P5-Bis(Adenosine-5'-)pentaphosphate (Ap5a)
pdb|1ZAK|B Chain B, Adenylate Kinase From Maize In Complex With The Inhibitor
P1,P5-Bis(Adenosine-5'-)pentaphosphate (Ap5a)
Length = 222
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 59/114 (51%), Gaps = 4/114 (3%)
Query: 85 GSPRAKKHVYAEMLSKLLEVPRISMSSIVRQDLSPRSSLHKQIANAVNRGEVVSEDIIFG 144
G+P + K E++ ++ IS ++R +++ S K+ + +G++V ++I+
Sbjct: 12 GAPASGKGTQCELIKTKYQLAHISAGDLLRAEIAAGSENGKRAKEFMEKGQLVPDEIVVN 71
Query: 145 LLSKRLEDGYYRGEIGFILDGLPRSRIQAEILDQLAEI--DLVVNFKCADNFIV 196
++ +RL + E G++LDG PRS QA L+ L EI D + D +V
Sbjct: 72 MVKERLRQPDAQ-ENGWLLDGYPRSYSQAMALETL-EIRPDTFILLDVPDELLV 123
>pdb|3UMF|A Chain A, Schistosoma Mansoni Adenylate Kinase
Length = 217
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 74/162 (45%), Gaps = 21/162 (12%)
Query: 84 IGSPRAKKHVYAEMLSKLLEVPRISMSSIVRQDLSPRSSLHKQIANAVNRGEVVSEDIIF 143
+G P + K E L + +S ++R ++ S K++ + RGE+V +++
Sbjct: 35 LGGPGSGKGTQCEKLVQKFHFNHLSSGDLLRAEVQSGSPKGKELKAMMERGELVPLEVVL 94
Query: 144 GLLSK---RLEDGYYRGEIGFILDGLPRSRIQA-EILDQLAEIDLVVNFKCADNFI---- 195
LL + +L D F++DG PR Q + ++ V+NF ++ +
Sbjct: 95 ALLKEAMIKLVDKNCH----FLIDGYPRELDQGIKFEKEVCPCLCVINFDVSEEVMRKRL 150
Query: 196 ---------VTNRGGSLKEKLEAYAELSKPLEDYYQKQKKLL 228
V + ++ ++ + EL+KP+ ++Y++Q K++
Sbjct: 151 LKRAETSNRVDDNEETIVKRFRTFNELTKPVIEHYKQQNKVI 192
>pdb|1TEV|A Chain A, Crystal Structure Of The Human UmpCMP KINASE IN OPEN
Conformation
Length = 196
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 75/164 (45%), Gaps = 20/164 (12%)
Query: 84 IGSPRAKKHVYAEMLSKLLEVPRISMSSIVRQD-LSPRSSLHKQIANAVNRGEVVSEDII 142
+G P A K + + +S ++R + +P S + I + G++V +I
Sbjct: 9 LGGPGAGKGTQCARIVEKYGYTHLSAGELLRDERKNPDSQYGELIEKYIKEGKIVPVEIT 68
Query: 143 FGLLSKRLEDGYYRG--EIGFILDGLPRSR--IQA--EILDQLAEIDLVVNFKCADNFIV 196
LL + ++ + F++DG PR++ +Q + +D A++ V+ F C + +
Sbjct: 69 ISLLKREMDQTMAANAQKNKFLIDGFPRNQDNLQGWNKTMDGKADVSFVLFFDCNNEICI 128
Query: 197 T---NRGGS----------LKEKLEAYAELSKPLEDYYQKQKKL 227
RG S L+++++ Y + +KP+ D Y++ K+
Sbjct: 129 ERCLERGKSSGRSDDNRESLEKRIQTYLQSTKPIIDLYEEMGKV 172
>pdb|1Z83|A Chain A, Crystal Structure Of Human Ak1a In Complex With Ap5a
pdb|1Z83|B Chain B, Crystal Structure Of Human Ak1a In Complex With Ap5a
pdb|1Z83|C Chain C, Crystal Structure Of Human Ak1a In Complex With Ap5a
pdb|2C95|A Chain A, Structure Of Adenylate Kinase 1 In Complex With P1,P4-Di
(Adenosine)tetraphosphate
pdb|2C95|B Chain B, Structure Of Adenylate Kinase 1 In Complex With P1,P4-Di
(Adenosine)tetraphosphate
Length = 196
Score = 35.4 bits (80), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/155 (18%), Positives = 72/155 (46%), Gaps = 15/155 (9%)
Query: 84 IGSPRAKKHVYAEMLSKLLEVPRISMSSIVRQDLSPRSSLHKQIANAVNRGEVVSEDIIF 143
+G P + K E + + +S ++R ++S S+ K+++ + +G++V + +
Sbjct: 15 VGGPGSGKGTQCEKIVQKYGYTHLSTGDLLRSEVSSGSARGKKLSEIMEKGQLVPLETVL 74
Query: 144 GLLSKRLEDGYYRGEIGFILDGLPRSRIQAEILDQ-LAEIDLVVNFKCADNFI------- 195
+L + + GF++DG PR Q E ++ + + L++ +
Sbjct: 75 DMLRDAMVAKVNTSK-GFLIDGYPREVQQGEEFERRIGQPTLLLYVDAGPETMTQRLLKR 133
Query: 196 ------VTNRGGSLKEKLEAYAELSKPLEDYYQKQ 224
V + ++K++LE Y + ++P+ +Y+K+
Sbjct: 134 GETSGRVDDNEETIKKRLETYYKATEPVIAFYEKR 168
>pdb|3ADK|A Chain A, Refined Structure Of Porcine Cytosolic Adenylate Kinase At
2.1 Angstroms Resolution
Length = 195
Score = 34.3 bits (77), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 29/155 (18%), Positives = 71/155 (45%), Gaps = 15/155 (9%)
Query: 84 IGSPRAKKHVYAEMLSKLLEVPRISMSSIVRQDLSPRSSLHKQIANAVNRGEVVSEDIIF 143
+G P + K E + + +S ++R ++S S+ K ++ + +G++V + +
Sbjct: 15 VGGPGSGKGTQCEKIVQKYGYTHLSTGDLLRAEVSSGSARGKMLSEIMEKGQLVPLETVL 74
Query: 144 GLLSKRLEDGYYRGEIGFILDGLPRSRIQAEILD-QLAEIDLVVNFKCADNFI------- 195
+L + + GF++DG PR Q E + ++ + L++ +
Sbjct: 75 DMLRDAMVAKVDTSK-GFLIDGYPREVKQGEEFERKIGQPTLLLYVDAGPETMTKRLLKR 133
Query: 196 ------VTNRGGSLKEKLEAYAELSKPLEDYYQKQ 224
V + ++K++LE Y + ++P+ +Y+K+
Sbjct: 134 GETSGRVDDNEETIKKRLETYYKATEPVIAFYEKR 168
>pdb|1DLJ|A Chain A, The First Structure Of Udp-Glucose Dehydrogenase (Udpgdh)
Reveals The Catalytic Residues Necessary For The
Two-Fold Oxidation
Length = 402
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 11/115 (9%)
Query: 96 EMLSKLLEVPRISMSSIVRQDLSPRSSLHKQIANAVNRGEVVSEDI-IFGLLSKRLEDGY 154
++L+ +P+ + +IV + +S + KQI N + E + + ++ L+ K D +
Sbjct: 267 QLLANYNNIPQTLIEAIVSSNNVRKSYIAKQIINVLKEQESPVKVVGVYRLIMKSNSDNF 326
Query: 155 YRGEIGFILDGLPRSRIQAEIL----------DQLAEIDLVVNFKCADNFIVTNR 199
I ++D L I+ I DQ ++ + NFK N IVTNR
Sbjct: 327 RESAIKDVIDILKSKDIKIIIYEPMLNKLESEDQSVLVNDLENFKKQANIIVTNR 381
>pdb|1DLI|A Chain A, The First Structure Of Udp-Glucose Dehydrogenase (Udpgdh)
Reveals The Catalytic Residues Necessary For The
Two-Fold Oxidation
Length = 402
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 11/115 (9%)
Query: 96 EMLSKLLEVPRISMSSIVRQDLSPRSSLHKQIANAVNRGEVVSEDI-IFGLLSKRLEDGY 154
++L+ +P+ + +IV + +S + KQI N + E + + ++ L+ K D +
Sbjct: 267 QLLANYNNIPQTLIEAIVSSNNVRKSYIAKQIINVLKEQESPVKVVGVYRLIMKSNSDNF 326
Query: 155 YRGEIGFILDGLPRSRIQAEIL----------DQLAEIDLVVNFKCADNFIVTNR 199
I ++D L I+ I DQ ++ + NFK N IVTNR
Sbjct: 327 RESAIKDVIDILKSKDIKIIIYEPMLNKLESEDQSVLVNDLENFKKQANIIVTNR 381
>pdb|2P8T|A Chain A, Hypothetical Protein Ph0730 From Pyrococcus Horikoshii Ot3
Length = 200
Score = 31.6 bits (70), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 14/103 (13%)
Query: 159 IGFILDGLPRSRIQAEILDQLAEIDL---VVNFKCADNFIVTNRGGSLKEKLEAYAELSK 215
IG +DG P I + + I+L + F I+T + + + E +
Sbjct: 88 IGVSVDGYPGIAIVVKNPPEFKSIELRDEAIKFDAKGAMILTVKDNEI-----VFPEDFR 142
Query: 216 PLEDYY-QKQKKLLEFQVGSAPVETW-----QGLLTALHLQHI 252
PL++ Y + KK+++++ G A + TW + L +A+H+ +I
Sbjct: 143 PLKEMYPEVAKKIVDYEDGDAVIITWAETPAKALKSAIHVAYI 185
>pdb|4ENR|A Chain A, Structure Of E530i Variant E. Coli Kate
pdb|4ENR|B Chain B, Structure Of E530i Variant E. Coli Kate
pdb|4ENR|C Chain C, Structure Of E530i Variant E. Coli Kate
pdb|4ENR|D Chain D, Structure Of E530i Variant E. Coli Kate
Length = 753
Score = 30.8 bits (68), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 28/63 (44%)
Query: 134 GEVVSEDIIFGLLSKRLEDGYYRGEIGFILDGLPRSRIQAEILDQLAEIDLVVNFKCADN 193
GE S +F L E + FIL + R I+ ++DQLA IDL + A N
Sbjct: 502 GEYYSHPRLFWLSQTPFEQRHIVDGFSFILSKVVRPYIRERVVDQLAHIDLTLAQAVAKN 561
Query: 194 FIV 196
+
Sbjct: 562 LGI 564
>pdb|1QF9|A Chain A, Ph Influences Fluoride Coordination Number Of The Alfx
Phosphoryl Transfer Transition State Analog In UmpCMP
Kinase
pdb|5UKD|A Chain A, Ph Influences Fluoride Coordination Number Of The Alfx
Phosphoryl Transfer Transition State Analog
pdb|1UKE|A Chain A, UmpCMP KINASE FROM SLIME MOLD
pdb|2UKD|A Chain A, UmpCMP KINASE FROM SLIME MOLD COMPLEXED WITH ADP, CMP
pdb|3UKD|A Chain A, UmpCMP KINASE FROM SLIME MOLD COMPLEXED WITH ADP, CMP, AND
Alf3
pdb|4UKD|A Chain A, UmpCMP KINASE FROM SLIME MOLD COMPLEXED WITH ADP, UDP,
Beryllium Fluoride
Length = 194
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/161 (19%), Positives = 64/161 (39%), Gaps = 20/161 (12%)
Query: 84 IGSPRAKKHVYAEMLSKLLEVPRISMSSIVRQDLSPRSSLHKQIANAVNRGEVVSEDIIF 143
+G P + K + + +S ++RQ+ S + IA + GE+V +
Sbjct: 12 LGGPGSGKGTQCANIVRDFGWVHLSAGDLLRQEQQSGSKDGEMIATMIKNGEIVPSIVTV 71
Query: 144 GLLSKRLEDGYYRGEIGFILDGLPR----SRIQAEILDQLAEIDLVVNFKCADNFI---V 196
LL ++ + F++DG PR + E + + V+ F C + + +
Sbjct: 72 KLLKNAIDANQGK---NFLVDGFPRNEENNNSWEENMKDFVDTKFVLFFDCPEEVMTQRL 128
Query: 197 TNRG----------GSLKEKLEAYAELSKPLEDYYQKQKKL 227
RG S+K++ + +K + D+Y K K+
Sbjct: 129 LKRGESSGRSDDNIESIKKRFNTFNVQTKLVIDHYNKFDKV 169
>pdb|4ENP|A Chain A, Structure Of E530a Variant E. Coli Kate
pdb|4ENP|B Chain B, Structure Of E530a Variant E. Coli Kate
pdb|4ENP|C Chain C, Structure Of E530a Variant E. Coli Kate
pdb|4ENP|D Chain D, Structure Of E530a Variant E. Coli Kate
Length = 753
Score = 28.5 bits (62), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 27/63 (42%)
Query: 134 GEVVSEDIIFGLLSKRLEDGYYRGEIGFILDGLPRSRIQAEILDQLAEIDLVVNFKCADN 193
GE S +F L E + F L + R I+ ++DQLA IDL + A N
Sbjct: 502 GEYYSHPRLFWLSQTPFEQRHIVDGFSFALSKVVRPYIRERVVDQLAHIDLTLAQAVAKN 561
Query: 194 FIV 196
+
Sbjct: 562 LGI 564
>pdb|1ZKO|A Chain A, Crystal Structure Of Glycine Cleavage System H Protein
(Tm0212) From Thermotoga Maritima At 1.65 A Resolution
pdb|1ZKO|B Chain B, Crystal Structure Of Glycine Cleavage System H Protein
(Tm0212) From Thermotoga Maritima At 1.65 A Resolution
Length = 136
Score = 28.5 bits (62), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 65 VTLPDTEGRERRRGVHWAFIGSPRAKKHVYAEMLSKLLEV 104
V LP+ GRE ++G A I S +A VYA + K++EV
Sbjct: 50 VDLPEV-GREVKKGEVVASIESVKAAADVYAPLSGKIVEV 88
>pdb|3L9F|A Chain A, The Crystal Structure Of Smu.1604c From Streptococcus
Mutans Ua159
pdb|3L9F|B Chain B, The Crystal Structure Of Smu.1604c From Streptococcus
Mutans Ua159
pdb|3L9F|C Chain C, The Crystal Structure Of Smu.1604c From Streptococcus
Mutans Ua159
pdb|3L9F|D Chain D, The Crystal Structure Of Smu.1604c From Streptococcus
Mutans Ua159
Length = 204
Score = 28.5 bits (62), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 117 LSPRSSLHKQIANA--VNRGEVVSEDIIFGLLSKRLEDGY 154
L PR S + + RG + +DII G+LSK+ GY
Sbjct: 14 LVPRGSHMASMTGGQQMGRGSMQGKDIILGILSKKERSGY 53
>pdb|3SWO|A Chain A, Crystal Structure Of A Glutaryl-Coa Dehydrogenase From
Mycobacterium Smegmatis In Complex With Fadh2
pdb|3SWO|B Chain B, Crystal Structure Of A Glutaryl-Coa Dehydrogenase From
Mycobacterium Smegmatis In Complex With Fadh2
pdb|3SWO|C Chain C, Crystal Structure Of A Glutaryl-Coa Dehydrogenase From
Mycobacterium Smegmatis In Complex With Fadh2
pdb|3SWO|D Chain D, Crystal Structure Of A Glutaryl-Coa Dehydrogenase From
Mycobacterium Smegmatis In Complex With Fadh2
Length = 399
Score = 28.1 bits (61), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 12/68 (17%)
Query: 195 IVTNRGGSLKEKLE---AYAE----LSKPLEDYYQKQKKLLEFQVGSAPVETWQGLLTAL 247
IV G+ ++ LE AY + KPL +Y Q+KL V E +G+L A+
Sbjct: 260 IVFGALGAARDSLETTIAYTQSREVFDKPLSNYQLTQEKLANMTV-----ELGKGMLLAI 314
Query: 248 HLQHINAA 255
HL I A
Sbjct: 315 HLGRIKDA 322
>pdb|2KA7|A Chain A, Nmr Solution Structure Of Tm0212 At 40 C
Length = 124
Score = 28.1 bits (61), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 65 VTLPDTEGRERRRGVHWAFIGSPRAKKHVYAEMLSKLLEV 104
V LP+ GRE ++G A I S +A VYA + K++EV
Sbjct: 38 VDLPEV-GREVKKGEVVASIESVKAAADVYAPLSGKIVEV 76
>pdb|4ENS|A Chain A, Structure Of E530q Variant Of E. Coli Kate
pdb|4ENS|B Chain B, Structure Of E530q Variant Of E. Coli Kate
pdb|4ENS|C Chain C, Structure Of E530q Variant Of E. Coli Kate
pdb|4ENS|D Chain D, Structure Of E530q Variant Of E. Coli Kate
Length = 753
Score = 28.1 bits (61), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 27/63 (42%)
Query: 134 GEVVSEDIIFGLLSKRLEDGYYRGEIGFILDGLPRSRIQAEILDQLAEIDLVVNFKCADN 193
GE S +F L E + F L + R I+ ++DQLA IDL + A N
Sbjct: 502 GEYYSHPRLFWLSQTPFEQRHIVDGFSFQLSKVVRPYIRERVVDQLAHIDLTLAQAVAKN 561
Query: 194 FIV 196
+
Sbjct: 562 LGI 564
>pdb|4ENQ|A Chain A, Structure Of E530d Variant E. Coli Kate
pdb|4ENQ|B Chain B, Structure Of E530d Variant E. Coli Kate
pdb|4ENQ|C Chain C, Structure Of E530d Variant E. Coli Kate
pdb|4ENQ|D Chain D, Structure Of E530d Variant E. Coli Kate
Length = 753
Score = 27.7 bits (60), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 27/63 (42%)
Query: 134 GEVVSEDIIFGLLSKRLEDGYYRGEIGFILDGLPRSRIQAEILDQLAEIDLVVNFKCADN 193
GE S +F L E + F L + R I+ ++DQLA IDL + A N
Sbjct: 502 GEYYSHPRLFWLSQTPFEQRHIVDGFSFDLSKVVRPYIRERVVDQLAHIDLTLAQAVAKN 561
Query: 194 FIV 196
+
Sbjct: 562 LGI 564
>pdb|3TTX|A Chain A, Structure Of The F413k Variant Of E. Coli Kate
pdb|3TTX|B Chain B, Structure Of The F413k Variant Of E. Coli Kate
pdb|3TTX|C Chain C, Structure Of The F413k Variant Of E. Coli Kate
pdb|3TTX|D Chain D, Structure Of The F413k Variant Of E. Coli Kate
Length = 753
Score = 27.7 bits (60), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 27/63 (42%)
Query: 134 GEVVSEDIIFGLLSKRLEDGYYRGEIGFILDGLPRSRIQAEILDQLAEIDLVVNFKCADN 193
GE S +F L E + F L + R I+ ++DQLA IDL + A N
Sbjct: 502 GEYYSHPRLFWLSQTPFEQRHIVDGFSFELSKVVRPYIRERVVDQLAHIDLTLAQAVAKN 561
Query: 194 FIV 196
+
Sbjct: 562 LGI 564
>pdb|3P9P|A Chain A, Structure Of I274v Variant Of E. Coli Kate
pdb|3P9P|B Chain B, Structure Of I274v Variant Of E. Coli Kate
pdb|3P9P|C Chain C, Structure Of I274v Variant Of E. Coli Kate
pdb|3P9P|D Chain D, Structure Of I274v Variant Of E. Coli Kate
Length = 753
Score = 27.7 bits (60), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 27/63 (42%)
Query: 134 GEVVSEDIIFGLLSKRLEDGYYRGEIGFILDGLPRSRIQAEILDQLAEIDLVVNFKCADN 193
GE S +F L E + F L + R I+ ++DQLA IDL + A N
Sbjct: 502 GEYYSHPRLFWLSQTPFEQRHIVDGFSFELSKVVRPYIRERVVDQLAHIDLTLAQAVAKN 561
Query: 194 FIV 196
+
Sbjct: 562 LGI 564
>pdb|3P9Q|A Chain A, Structure Of I274c Variant Of E. Coli Kate
pdb|3P9Q|B Chain B, Structure Of I274c Variant Of E. Coli Kate
pdb|3P9Q|C Chain C, Structure Of I274c Variant Of E. Coli Kate
pdb|3P9Q|D Chain D, Structure Of I274c Variant Of E. Coli Kate
pdb|3PQ2|A Chain A, Structure Of I274c Variant Of E. Coli Kate[] - Images 1-6
pdb|3PQ2|B Chain B, Structure Of I274c Variant Of E. Coli Kate[] - Images 1-6
pdb|3PQ2|C Chain C, Structure Of I274c Variant Of E. Coli Kate[] - Images 1-6
pdb|3PQ2|D Chain D, Structure Of I274c Variant Of E. Coli Kate[] - Images 1-6
pdb|3PQ3|A Chain A, Structure Of I274c Variant Of E. Coli Kate[] - Images 7-12
pdb|3PQ3|B Chain B, Structure Of I274c Variant Of E. Coli Kate[] - Images 7-12
pdb|3PQ3|C Chain C, Structure Of I274c Variant Of E. Coli Kate[] - Images 7-12
pdb|3PQ3|D Chain D, Structure Of I274c Variant Of E. Coli Kate[] - Images 7-12
pdb|3PQ4|A Chain A, Structure Of I274c Variant Of E. Coli Kate[] - Images
13-18
pdb|3PQ4|B Chain B, Structure Of I274c Variant Of E. Coli Kate[] - Images
13-18
pdb|3PQ4|C Chain C, Structure Of I274c Variant Of E. Coli Kate[] - Images
13-18
pdb|3PQ4|D Chain D, Structure Of I274c Variant Of E. Coli Kate[] - Images
13-18
pdb|3PQ5|A Chain A, Structure Of I274c Variant Of E. Coli Kate[] - Images
19-24
pdb|3PQ5|B Chain B, Structure Of I274c Variant Of E. Coli Kate[] - Images
19-24
pdb|3PQ5|C Chain C, Structure Of I274c Variant Of E. Coli Kate[] - Images
19-24
pdb|3PQ5|D Chain D, Structure Of I274c Variant Of E. Coli Kate[] - Images
19-24
pdb|3PQ6|A Chain A, Structure Of I274c Variant Of E. Coli Kate[] - Images
25-30
pdb|3PQ6|B Chain B, Structure Of I274c Variant Of E. Coli Kate[] - Images
25-30
pdb|3PQ6|C Chain C, Structure Of I274c Variant Of E. Coli Kate[] - Images
25-30
pdb|3PQ6|D Chain D, Structure Of I274c Variant Of E. Coli Kate[] - Images
25-30
pdb|3PQ7|A Chain A, Structure Of I274c Variant Of E. Coli Kate[] - Images
31-36
pdb|3PQ7|B Chain B, Structure Of I274c Variant Of E. Coli Kate[] - Images
31-36
pdb|3PQ7|C Chain C, Structure Of I274c Variant Of E. Coli Kate[] - Images
31-36
pdb|3PQ7|D Chain D, Structure Of I274c Variant Of E. Coli Kate[] - Images
31-36
pdb|3PQ8|A Chain A, Structure Of I274c Variant Of E. Coli Kate[] - Images
37-42
pdb|3PQ8|B Chain B, Structure Of I274c Variant Of E. Coli Kate[] - Images
37-42
pdb|3PQ8|C Chain C, Structure Of I274c Variant Of E. Coli Kate[] - Images
37-42
pdb|3PQ8|D Chain D, Structure Of I274c Variant Of E. Coli Kate[] - Images
37-42
Length = 753
Score = 27.7 bits (60), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 27/63 (42%)
Query: 134 GEVVSEDIIFGLLSKRLEDGYYRGEIGFILDGLPRSRIQAEILDQLAEIDLVVNFKCADN 193
GE S +F L E + F L + R I+ ++DQLA IDL + A N
Sbjct: 502 GEYYSHPRLFWLSQTPFEQRHIVDGFSFELSKVVRPYIRERVVDQLAHIDLTLAQAVAKN 561
Query: 194 FIV 196
+
Sbjct: 562 LGI 564
>pdb|1GGK|A Chain A, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Asn201his Variant.
pdb|1GGK|B Chain B, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Asn201his Variant.
pdb|1GGK|C Chain C, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Asn201his Variant.
pdb|1GGK|D Chain D, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Asn201his Variant
Length = 753
Score = 27.7 bits (60), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 27/63 (42%)
Query: 134 GEVVSEDIIFGLLSKRLEDGYYRGEIGFILDGLPRSRIQAEILDQLAEIDLVVNFKCADN 193
GE S +F L E + F L + R I+ ++DQLA IDL + A N
Sbjct: 502 GEYYSHPRLFWLSQTPFEQRHIVDGFSFELSKVVRPYIRERVVDQLAHIDLTLAQAVAKN 561
Query: 194 FIV 196
+
Sbjct: 562 LGI 564
>pdb|1P7Z|A Chain A, Crystal Structure Of The D181s Variant Of Catalase Hpii
From E. Coli
pdb|1P7Z|B Chain B, Crystal Structure Of The D181s Variant Of Catalase Hpii
From E. Coli
pdb|1P7Z|C Chain C, Crystal Structure Of The D181s Variant Of Catalase Hpii
From E. Coli
pdb|1P7Z|D Chain D, Crystal Structure Of The D181s Variant Of Catalase Hpii
From E. Coli
Length = 753
Score = 27.7 bits (60), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 27/63 (42%)
Query: 134 GEVVSEDIIFGLLSKRLEDGYYRGEIGFILDGLPRSRIQAEILDQLAEIDLVVNFKCADN 193
GE S +F L E + F L + R I+ ++DQLA IDL + A N
Sbjct: 502 GEYYSHPRLFWLSQTPFEQRHIVDGFSFELSKVVRPYIRERVVDQLAHIDLTLAQAVAKN 561
Query: 194 FIV 196
+
Sbjct: 562 LGI 564
>pdb|1P81|A Chain A, Crystal Structure Of The D181e Variant Of Catalase Hpii
From E. Coli
pdb|1P81|B Chain B, Crystal Structure Of The D181e Variant Of Catalase Hpii
From E. Coli
pdb|1P81|C Chain C, Crystal Structure Of The D181e Variant Of Catalase Hpii
From E. Coli
pdb|1P81|D Chain D, Crystal Structure Of The D181e Variant Of Catalase Hpii
From E. Coli
Length = 753
Score = 27.7 bits (60), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 27/63 (42%)
Query: 134 GEVVSEDIIFGLLSKRLEDGYYRGEIGFILDGLPRSRIQAEILDQLAEIDLVVNFKCADN 193
GE S +F L E + F L + R I+ ++DQLA IDL + A N
Sbjct: 502 GEYYSHPRLFWLSQTPFEQRHIVDGFSFELSKVVRPYIRERVVDQLAHIDLTLAQAVAKN 561
Query: 194 FIV 196
+
Sbjct: 562 LGI 564
>pdb|1CF9|A Chain A, Structure Of The Mutant Val169cys Of Catalase Hpii From
Escherichia Coli
pdb|1CF9|B Chain B, Structure Of The Mutant Val169cys Of Catalase Hpii From
Escherichia Coli
pdb|1CF9|C Chain C, Structure Of The Mutant Val169cys Of Catalase Hpii From
Escherichia Coli
pdb|1CF9|D Chain D, Structure Of The Mutant Val169cys Of Catalase Hpii From
Escherichia Coli
Length = 753
Score = 27.7 bits (60), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 27/63 (42%)
Query: 134 GEVVSEDIIFGLLSKRLEDGYYRGEIGFILDGLPRSRIQAEILDQLAEIDLVVNFKCADN 193
GE S +F L E + F L + R I+ ++DQLA IDL + A N
Sbjct: 502 GEYYSHPRLFWLSQTPFEQRHIVDGFSFELSKVVRPYIRERVVDQLAHIDLTLAQAVAKN 561
Query: 194 FIV 196
+
Sbjct: 562 LGI 564
>pdb|1P80|A Chain A, Crystal Structure Of The D181q Variant Of Catalase Hpii
From E. Coli
pdb|1P80|B Chain B, Crystal Structure Of The D181q Variant Of Catalase Hpii
From E. Coli
pdb|1P80|C Chain C, Crystal Structure Of The D181q Variant Of Catalase Hpii
From E. Coli
pdb|1P80|D Chain D, Crystal Structure Of The D181q Variant Of Catalase Hpii
From E. Coli
Length = 753
Score = 27.7 bits (60), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 27/63 (42%)
Query: 134 GEVVSEDIIFGLLSKRLEDGYYRGEIGFILDGLPRSRIQAEILDQLAEIDLVVNFKCADN 193
GE S +F L E + F L + R I+ ++DQLA IDL + A N
Sbjct: 502 GEYYSHPRLFWLSQTPFEQRHIVDGFSFELSKVVRPYIRERVVDQLAHIDLTLAQAVAKN 561
Query: 194 FIV 196
+
Sbjct: 562 LGI 564
>pdb|1IPH|A Chain A, Structure Of Catalase Hpii From Escherichia Coli
pdb|1IPH|B Chain B, Structure Of Catalase Hpii From Escherichia Coli
pdb|1IPH|C Chain C, Structure Of Catalase Hpii From Escherichia Coli
pdb|1IPH|D Chain D, Structure Of Catalase Hpii From Escherichia Coli
pdb|1GGE|A Chain A, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Native Structure At 1.9 A Resolution.
pdb|1GGE|B Chain B, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Native Structure At 1.9 A Resolution.
pdb|1GGE|C Chain C, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Native Structure At 1.9 A Resolution.
pdb|1GGE|D Chain D, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Native Structure At 1.9 A Resolution
Length = 753
Score = 27.7 bits (60), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 27/63 (42%)
Query: 134 GEVVSEDIIFGLLSKRLEDGYYRGEIGFILDGLPRSRIQAEILDQLAEIDLVVNFKCADN 193
GE S +F L E + F L + R I+ ++DQLA IDL + A N
Sbjct: 502 GEYYSHPRLFWLSQTPFEQRHIVDGFSFELSKVVRPYIRERVVDQLAHIDLTLAQAVAKN 561
Query: 194 FIV 196
+
Sbjct: 562 LGI 564
>pdb|4ENW|A Chain A, Structure Of The S234n Variant Of E. Coli Kate
pdb|4ENW|B Chain B, Structure Of The S234n Variant Of E. Coli Kate
pdb|4ENW|C Chain C, Structure Of The S234n Variant Of E. Coli Kate
pdb|4ENW|D Chain D, Structure Of The S234n Variant Of E. Coli Kate
Length = 753
Score = 27.7 bits (60), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 27/63 (42%)
Query: 134 GEVVSEDIIFGLLSKRLEDGYYRGEIGFILDGLPRSRIQAEILDQLAEIDLVVNFKCADN 193
GE S +F L E + F L + R I+ ++DQLA IDL + A N
Sbjct: 502 GEYYSHPRLFWLSQTPFEQRHIVDGFSFELSKVVRPYIRERVVDQLAHIDLTLAQAVAKN 561
Query: 194 FIV 196
+
Sbjct: 562 LGI 564
>pdb|3TTW|A Chain A, Structure Of The F413e Variant Of E. Coli Kate
pdb|3TTW|B Chain B, Structure Of The F413e Variant Of E. Coli Kate
pdb|3TTW|C Chain C, Structure Of The F413e Variant Of E. Coli Kate
pdb|3TTW|D Chain D, Structure Of The F413e Variant Of E. Coli Kate
Length = 753
Score = 27.7 bits (60), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 27/63 (42%)
Query: 134 GEVVSEDIIFGLLSKRLEDGYYRGEIGFILDGLPRSRIQAEILDQLAEIDLVVNFKCADN 193
GE S +F L E + F L + R I+ ++DQLA IDL + A N
Sbjct: 502 GEYYSHPRLFWLSQTPFEQRHIVDGFSFELSKVVRPYIRERVVDQLAHIDLTLAQAVAKN 561
Query: 194 FIV 196
+
Sbjct: 562 LGI 564
>pdb|3P9S|A Chain A, Structure Of I274a Variant Of E. Coli Kate
pdb|3P9S|B Chain B, Structure Of I274a Variant Of E. Coli Kate
pdb|3P9S|C Chain C, Structure Of I274a Variant Of E. Coli Kate
pdb|3P9S|D Chain D, Structure Of I274a Variant Of E. Coli Kate
Length = 753
Score = 27.7 bits (60), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 27/63 (42%)
Query: 134 GEVVSEDIIFGLLSKRLEDGYYRGEIGFILDGLPRSRIQAEILDQLAEIDLVVNFKCADN 193
GE S +F L E + F L + R I+ ++DQLA IDL + A N
Sbjct: 502 GEYYSHPRLFWLSQTPFEQRHIVDGFSFELSKVVRPYIRERVVDQLAHIDLTLAQAVAKN 561
Query: 194 FIV 196
+
Sbjct: 562 LGI 564
>pdb|1P7Y|A Chain A, Crystal Structure Of The D181a Variant Of Catalase Hpii
From E. Coli
pdb|1P7Y|B Chain B, Crystal Structure Of The D181a Variant Of Catalase Hpii
From E. Coli
pdb|1P7Y|C Chain C, Crystal Structure Of The D181a Variant Of Catalase Hpii
From E. Coli
pdb|1P7Y|D Chain D, Crystal Structure Of The D181a Variant Of Catalase Hpii
From E. Coli
Length = 753
Score = 27.7 bits (60), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 27/63 (42%)
Query: 134 GEVVSEDIIFGLLSKRLEDGYYRGEIGFILDGLPRSRIQAEILDQLAEIDLVVNFKCADN 193
GE S +F L E + F L + R I+ ++DQLA IDL + A N
Sbjct: 502 GEYYSHPRLFWLSQTPFEQRHIVDGFSFELSKVVRPYIRERVVDQLAHIDLTLAQAVAKN 561
Query: 194 FIV 196
+
Sbjct: 562 LGI 564
>pdb|1GGJ|A Chain A, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Asn201ala Variant.
pdb|1GGJ|B Chain B, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Asn201ala Variant.
pdb|1GGJ|C Chain C, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Asn201ala Variant.
pdb|1GGJ|D Chain D, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Asn201ala Variant
Length = 753
Score = 27.7 bits (60), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 27/63 (42%)
Query: 134 GEVVSEDIIFGLLSKRLEDGYYRGEIGFILDGLPRSRIQAEILDQLAEIDLVVNFKCADN 193
GE S +F L E + F L + R I+ ++DQLA IDL + A N
Sbjct: 502 GEYYSHPRLFWLSQTPFEQRHIVDGFSFELSKVVRPYIRERVVDQLAHIDLTLAQAVAKN 561
Query: 194 FIV 196
+
Sbjct: 562 LGI 564
>pdb|4ENT|A Chain A, Structure Of The S234a Variant Of E. Coli Kate
pdb|4ENT|B Chain B, Structure Of The S234a Variant Of E. Coli Kate
pdb|4ENT|C Chain C, Structure Of The S234a Variant Of E. Coli Kate
pdb|4ENT|D Chain D, Structure Of The S234a Variant Of E. Coli Kate
Length = 753
Score = 27.7 bits (60), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 27/63 (42%)
Query: 134 GEVVSEDIIFGLLSKRLEDGYYRGEIGFILDGLPRSRIQAEILDQLAEIDLVVNFKCADN 193
GE S +F L E + F L + R I+ ++DQLA IDL + A N
Sbjct: 502 GEYYSHPRLFWLSQTPFEQRHIVDGFSFELSKVVRPYIRERVVDQLAHIDLTLAQAVAKN 561
Query: 194 FIV 196
+
Sbjct: 562 LGI 564
>pdb|3TTT|A Chain A, Structure Of F413y Variant Of E. Coli Kate
pdb|3TTT|B Chain B, Structure Of F413y Variant Of E. Coli Kate
pdb|3TTT|C Chain C, Structure Of F413y Variant Of E. Coli Kate
pdb|3TTT|D Chain D, Structure Of F413y Variant Of E. Coli Kate
Length = 753
Score = 27.7 bits (60), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 27/63 (42%)
Query: 134 GEVVSEDIIFGLLSKRLEDGYYRGEIGFILDGLPRSRIQAEILDQLAEIDLVVNFKCADN 193
GE S +F L E + F L + R I+ ++DQLA IDL + A N
Sbjct: 502 GEYYSHPRLFWLSQTPFEQRHIVDGFSFELSKVVRPYIRERVVDQLAHIDLTLAQAVAKN 561
Query: 194 FIV 196
+
Sbjct: 562 LGI 564
>pdb|1QF7|A Chain A, Structure Of The Mutant His392gln Of Catalase Hpii From E.
Coli
pdb|1QF7|B Chain B, Structure Of The Mutant His392gln Of Catalase Hpii From E.
Coli
pdb|1QF7|C Chain C, Structure Of The Mutant His392gln Of Catalase Hpii From E.
Coli
pdb|1QF7|D Chain D, Structure Of The Mutant His392gln Of Catalase Hpii From E.
Coli
Length = 753
Score = 27.7 bits (60), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 27/63 (42%)
Query: 134 GEVVSEDIIFGLLSKRLEDGYYRGEIGFILDGLPRSRIQAEILDQLAEIDLVVNFKCADN 193
GE S +F L E + F L + R I+ ++DQLA IDL + A N
Sbjct: 502 GEYYSHPRLFWLSQTPFEQRHIVDGFSFELSKVVRPYIRERVVDQLAHIDLTLAQAVAKN 561
Query: 194 FIV 196
+
Sbjct: 562 LGI 564
>pdb|1QWS|A Chain A, Structure Of The D181n Variant Of Catalase Hpii From E.
Coli
pdb|1QWS|B Chain B, Structure Of The D181n Variant Of Catalase Hpii From E.
Coli
pdb|1QWS|C Chain C, Structure Of The D181n Variant Of Catalase Hpii From E.
Coli
pdb|1QWS|D Chain D, Structure Of The D181n Variant Of Catalase Hpii From E.
Coli
Length = 753
Score = 27.7 bits (60), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 27/63 (42%)
Query: 134 GEVVSEDIIFGLLSKRLEDGYYRGEIGFILDGLPRSRIQAEILDQLAEIDLVVNFKCADN 193
GE S +F L E + F L + R I+ ++DQLA IDL + A N
Sbjct: 502 GEYYSHPRLFWLSQTPFEQRHIVDGFSFELSKVVRPYIRERVVDQLAHIDLTLAQAVAKN 561
Query: 194 FIV 196
+
Sbjct: 562 LGI 564
>pdb|3TTV|A Chain A, Structure Of The F413e Variant Of E. Coli Kate
pdb|3TTV|B Chain B, Structure Of The F413e Variant Of E. Coli Kate
pdb|3TTV|C Chain C, Structure Of The F413e Variant Of E. Coli Kate
pdb|3TTV|D Chain D, Structure Of The F413e Variant Of E. Coli Kate
Length = 753
Score = 27.7 bits (60), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 27/63 (42%)
Query: 134 GEVVSEDIIFGLLSKRLEDGYYRGEIGFILDGLPRSRIQAEILDQLAEIDLVVNFKCADN 193
GE S +F L E + F L + R I+ ++DQLA IDL + A N
Sbjct: 502 GEYYSHPRLFWLSQTPFEQRHIVDGFSFELSKVVRPYIRERVVDQLAHIDLTLAQAVAKN 561
Query: 194 FIV 196
+
Sbjct: 562 LGI 564
>pdb|3P9R|A Chain A, Structure Of I274g Variant Of E. Coli Kate
pdb|3P9R|B Chain B, Structure Of I274g Variant Of E. Coli Kate
pdb|3P9R|C Chain C, Structure Of I274g Variant Of E. Coli Kate
pdb|3P9R|D Chain D, Structure Of I274g Variant Of E. Coli Kate
Length = 753
Score = 27.7 bits (60), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 27/63 (42%)
Query: 134 GEVVSEDIIFGLLSKRLEDGYYRGEIGFILDGLPRSRIQAEILDQLAEIDLVVNFKCADN 193
GE S +F L E + F L + R I+ ++DQLA IDL + A N
Sbjct: 502 GEYYSHPRLFWLSQTPFEQRHIVDGFSFELSKVVRPYIRERVVDQLAHIDLTLAQAVAKN 561
Query: 194 FIV 196
+
Sbjct: 562 LGI 564
>pdb|1GG9|A Chain A, Crystal Structure Of Catalase Hpii From Escherichia Coli,
His128asn Variant.
pdb|1GG9|B Chain B, Crystal Structure Of Catalase Hpii From Escherichia Coli,
His128asn Variant.
pdb|1GG9|C Chain C, Crystal Structure Of Catalase Hpii From Escherichia Coli,
His128asn Variant.
pdb|1GG9|D Chain D, Crystal Structure Of Catalase Hpii From Escherichia Coli,
His128asn Variant.
pdb|1GGF|A Chain A, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Variant His128asn, Complex With Hydrogen Peroxide.
pdb|1GGF|B Chain B, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Variant His128asn, Complex With Hydrogen Peroxide.
pdb|1GGF|C Chain C, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Variant His128asn, Complex With Hydrogen Peroxide.
pdb|1GGF|D Chain D, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Variant His128asn, Complex With Hydrogen Peroxide
Length = 753
Score = 27.7 bits (60), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 27/63 (42%)
Query: 134 GEVVSEDIIFGLLSKRLEDGYYRGEIGFILDGLPRSRIQAEILDQLAEIDLVVNFKCADN 193
GE S +F L E + F L + R I+ ++DQLA IDL + A N
Sbjct: 502 GEYYSHPRLFWLSQTPFEQRHIVDGFSFELSKVVRPYIRERVVDQLAHIDLTLAQAVAKN 561
Query: 194 FIV 196
+
Sbjct: 562 LGI 564
>pdb|4ENV|A Chain A, Structure Of The S234i Variant Of E. Coli Kate
pdb|4ENV|B Chain B, Structure Of The S234i Variant Of E. Coli Kate
pdb|4ENV|C Chain C, Structure Of The S234i Variant Of E. Coli Kate
pdb|4ENV|D Chain D, Structure Of The S234i Variant Of E. Coli Kate
Length = 753
Score = 27.7 bits (60), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 27/63 (42%)
Query: 134 GEVVSEDIIFGLLSKRLEDGYYRGEIGFILDGLPRSRIQAEILDQLAEIDLVVNFKCADN 193
GE S +F L E + F L + R I+ ++DQLA IDL + A N
Sbjct: 502 GEYYSHPRLFWLSQTPFEQRHIVDGFSFELSKVVRPYIRERVVDQLAHIDLTLAQAVAKN 561
Query: 194 FIV 196
+
Sbjct: 562 LGI 564
>pdb|3TTU|A Chain A, Structure Of F413y/h128n Double Variant Of E. Coli Kate
pdb|3TTU|B Chain B, Structure Of F413y/h128n Double Variant Of E. Coli Kate
pdb|3TTU|C Chain C, Structure Of F413y/h128n Double Variant Of E. Coli Kate
pdb|3TTU|D Chain D, Structure Of F413y/h128n Double Variant Of E. Coli Kate
Length = 753
Score = 27.7 bits (60), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 27/63 (42%)
Query: 134 GEVVSEDIIFGLLSKRLEDGYYRGEIGFILDGLPRSRIQAEILDQLAEIDLVVNFKCADN 193
GE S +F L E + F L + R I+ ++DQLA IDL + A N
Sbjct: 502 GEYYSHPRLFWLSQTPFEQRHIVDGFSFELSKVVRPYIRERVVDQLAHIDLTLAQAVAKN 561
Query: 194 FIV 196
+
Sbjct: 562 LGI 564
>pdb|1GGH|A Chain A, Crystal Structure Of Catalase Hpii From Escherichia Coli,
His128ala Variant.
pdb|1GGH|B Chain B, Crystal Structure Of Catalase Hpii From Escherichia Coli,
His128ala Variant.
pdb|1GGH|C Chain C, Crystal Structure Of Catalase Hpii From Escherichia Coli,
His128ala Variant.
pdb|1GGH|D Chain D, Crystal Structure Of Catalase Hpii From Escherichia Coli,
His128ala Variant
Length = 753
Score = 27.7 bits (60), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 27/63 (42%)
Query: 134 GEVVSEDIIFGLLSKRLEDGYYRGEIGFILDGLPRSRIQAEILDQLAEIDLVVNFKCADN 193
GE S +F L E + F L + R I+ ++DQLA IDL + A N
Sbjct: 502 GEYYSHPRLFWLSQTPFEQRHIVDGFSFELSKVVRPYIRERVVDQLAHIDLTLAQAVAKN 561
Query: 194 FIV 196
+
Sbjct: 562 LGI 564
>pdb|4ENU|A Chain A, Structure Of The S234d Variant Of E. Coli Kate
pdb|4ENU|B Chain B, Structure Of The S234d Variant Of E. Coli Kate
pdb|4ENU|C Chain C, Structure Of The S234d Variant Of E. Coli Kate
pdb|4ENU|D Chain D, Structure Of The S234d Variant Of E. Coli Kate
Length = 753
Score = 27.7 bits (60), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 27/63 (42%)
Query: 134 GEVVSEDIIFGLLSKRLEDGYYRGEIGFILDGLPRSRIQAEILDQLAEIDLVVNFKCADN 193
GE S +F L E + F L + R I+ ++DQLA IDL + A N
Sbjct: 502 GEYYSHPRLFWLSQTPFEQRHIVDGFSFELSKVVRPYIRERVVDQLAHIDLTLAQAVAKN 561
Query: 194 FIV 196
+
Sbjct: 562 LGI 564
>pdb|1YE9|E Chain E, Crystal Structure Of Proteolytically Truncated Catalase
Hpii From E. Coli
pdb|1YE9|F Chain F, Crystal Structure Of Proteolytically Truncated Catalase
Hpii From E. Coli
pdb|1YE9|G Chain G, Crystal Structure Of Proteolytically Truncated Catalase
Hpii From E. Coli
pdb|1YE9|H Chain H, Crystal Structure Of Proteolytically Truncated Catalase
Hpii From E. Coli
pdb|1YE9|M Chain M, Crystal Structure Of Proteolytically Truncated Catalase
Hpii From E. Coli
pdb|1YE9|N Chain N, Crystal Structure Of Proteolytically Truncated Catalase
Hpii From E. Coli
pdb|1YE9|O Chain O, Crystal Structure Of Proteolytically Truncated Catalase
Hpii From E. Coli
pdb|1YE9|P Chain P, Crystal Structure Of Proteolytically Truncated Catalase
Hpii From E. Coli
Length = 259
Score = 27.3 bits (59), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 26/60 (43%)
Query: 134 GEVVSEDIIFGLLSKRLEDGYYRGEIGFILDGLPRSRIQAEILDQLAEIDLVVNFKCADN 193
GE S +F L E + F L + R I+ ++DQLA IDL + A N
Sbjct: 194 GEYYSHPRLFWLSQTPFEQRHIVDGFSFELSKVVRPYIRERVVDQLAHIDLTLAQAVAKN 253
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.134 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,588,266
Number of Sequences: 62578
Number of extensions: 303127
Number of successful extensions: 1065
Number of sequences better than 100.0: 83
Number of HSP's better than 100.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 960
Number of HSP's gapped (non-prelim): 94
length of query: 268
length of database: 14,973,337
effective HSP length: 97
effective length of query: 171
effective length of database: 8,903,271
effective search space: 1522459341
effective search space used: 1522459341
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 50 (23.9 bits)