Query 024392
Match_columns 268
No_of_seqs 323 out of 2906
Neff 9.2
Searched_HMMs 46136
Date Fri Mar 29 04:13:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024392.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024392hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02578 hydrolase 100.0 1.1E-29 2.4E-34 225.6 24.4 187 15-202 4-190 (354)
2 PLN02824 hydrolase, alpha/beta 99.9 5.5E-24 1.2E-28 184.1 21.5 121 79-199 9-137 (294)
3 PRK03592 haloalkane dehalogena 99.9 4.1E-24 9E-29 185.0 20.4 120 80-199 9-128 (295)
4 PRK06489 hypothetical protein; 99.9 3.3E-23 7.1E-28 184.5 20.1 116 84-199 46-189 (360)
5 PRK00870 haloalkane dehalogena 99.9 6.7E-23 1.4E-27 178.1 21.0 120 79-198 20-149 (302)
6 PLN02679 hydrolase, alpha/beta 99.9 2.3E-22 4.9E-27 179.1 20.2 122 79-200 62-192 (360)
7 PRK10349 carboxylesterase BioH 99.9 3.2E-22 6.9E-27 169.6 17.5 108 89-201 3-111 (256)
8 TIGR02240 PHA_depoly_arom poly 99.9 1E-22 2.3E-27 174.7 14.4 120 81-200 5-127 (276)
9 TIGR03343 biphenyl_bphD 2-hydr 99.9 2.9E-21 6.2E-26 165.7 19.8 113 87-199 19-136 (282)
10 PRK03204 haloalkane dehalogena 99.9 2.8E-21 6E-26 166.9 15.6 120 80-199 16-136 (286)
11 KOG4178 Soluble epoxide hydrol 99.9 5.3E-21 1.1E-25 162.3 15.3 124 77-200 21-149 (322)
12 TIGR03056 bchO_mg_che_rel puta 99.9 8E-21 1.7E-25 162.0 16.1 123 78-200 6-131 (278)
13 PRK11126 2-succinyl-6-hydroxy- 99.9 1.1E-20 2.4E-25 158.5 15.8 101 98-200 2-103 (242)
14 TIGR03611 RutD pyrimidine util 99.9 9.2E-21 2E-25 159.1 12.9 110 91-200 2-116 (257)
15 PRK10749 lysophospholipase L2; 99.8 8.5E-20 1.8E-24 160.7 19.3 122 79-200 32-167 (330)
16 PLN02385 hydrolase; alpha/beta 99.8 3.8E-20 8.3E-25 164.1 17.1 122 80-201 64-199 (349)
17 TIGR02427 protocat_pcaD 3-oxoa 99.8 4E-20 8.7E-25 154.0 15.1 111 90-200 2-115 (251)
18 PF12697 Abhydrolase_6: Alpha/ 99.8 1.1E-20 2.4E-25 154.7 11.4 100 101-200 1-102 (228)
19 PLN03084 alpha/beta hydrolase 99.8 5.1E-20 1.1E-24 164.4 15.7 118 82-199 109-232 (383)
20 TIGR01738 bioH putative pimelo 99.8 1E-19 2.2E-24 151.1 15.2 101 97-202 2-103 (245)
21 PLN02298 hydrolase, alpha/beta 99.8 3.7E-19 7.9E-24 156.6 18.8 125 77-201 32-171 (330)
22 PHA02857 monoglyceride lipase; 99.8 4.3E-19 9.4E-24 152.0 18.5 119 82-200 5-133 (276)
23 PRK10673 acyl-CoA esterase; Pr 99.8 1E-19 2.2E-24 153.7 14.1 102 97-199 15-116 (255)
24 PRK14875 acetoin dehydrogenase 99.8 7.6E-19 1.7E-23 156.6 19.7 119 82-200 113-233 (371)
25 PLN02965 Probable pheophorbida 99.8 8.8E-20 1.9E-24 154.8 12.0 100 100-199 5-107 (255)
26 PLN03087 BODYGUARD 1 domain co 99.8 4.1E-19 8.9E-24 162.0 16.7 119 82-200 180-310 (481)
27 PRK07581 hypothetical protein; 99.8 3.9E-19 8.4E-24 157.0 14.6 117 84-200 22-160 (339)
28 PLN02211 methyl indole-3-aceta 99.8 2.3E-19 4.9E-24 153.9 12.6 116 84-199 3-122 (273)
29 TIGR01250 pro_imino_pep_2 prol 99.8 2.7E-18 5.8E-23 146.2 18.8 118 82-199 6-131 (288)
30 PRK08775 homoserine O-acetyltr 99.8 1.2E-19 2.6E-24 160.6 10.7 116 83-200 41-174 (343)
31 TIGR03695 menH_SHCHC 2-succiny 99.8 1.5E-18 3.2E-23 144.2 14.1 105 98-202 1-108 (251)
32 COG1647 Esterase/lipase [Gener 99.8 3.8E-18 8.2E-23 136.7 15.0 167 98-267 15-187 (243)
33 TIGR01249 pro_imino_pep_1 prol 99.8 2.8E-18 6E-23 149.5 13.6 119 81-200 8-131 (306)
34 KOG4409 Predicted hydrolase/ac 99.8 3.2E-18 6.9E-23 146.0 13.0 106 97-202 89-198 (365)
35 TIGR01392 homoserO_Ac_trn homo 99.8 1.7E-18 3.7E-23 153.7 12.0 118 84-201 12-164 (351)
36 PLN02980 2-oxoglutarate decarb 99.8 1E-17 2.2E-22 172.6 19.1 112 90-201 1360-1482(1655)
37 PRK00175 metX homoserine O-ace 99.8 6E-18 1.3E-22 151.7 12.6 118 84-201 29-184 (379)
38 PLN02894 hydrolase, alpha/beta 99.7 2.2E-17 4.7E-22 149.0 14.7 106 97-202 104-214 (402)
39 COG2267 PldB Lysophospholipase 99.7 4.1E-17 8.9E-22 141.3 15.6 126 77-202 9-145 (298)
40 PLN02511 hydrolase 99.7 1.8E-17 4E-22 148.9 13.3 119 82-200 76-211 (388)
41 TIGR03101 hydr2_PEP hydrolase, 99.7 9.8E-17 2.1E-21 136.3 15.6 102 98-199 25-134 (266)
42 PRK10985 putative hydrolase; P 99.7 2.5E-16 5.4E-21 138.4 14.3 119 82-201 36-170 (324)
43 PRK05855 short chain dehydroge 99.7 1.8E-16 4E-21 149.1 14.0 117 81-197 6-129 (582)
44 KOG2984 Predicted hydrolase [G 99.7 1.4E-16 3E-21 125.9 8.9 122 83-204 26-154 (277)
45 TIGR03100 hydr1_PEP hydrolase, 99.7 5.6E-15 1.2E-19 126.8 18.8 100 97-199 25-134 (274)
46 PRK05077 frsA fermentation/res 99.7 2.5E-15 5.4E-20 135.9 17.0 119 81-199 172-300 (414)
47 KOG1455 Lysophospholipase [Lip 99.7 1.7E-15 3.7E-20 127.1 14.4 126 81-206 31-171 (313)
48 PLN02652 hydrolase; alpha/beta 99.7 1.4E-15 3E-20 136.6 14.7 115 85-200 118-246 (395)
49 KOG1454 Predicted hydrolase/ac 99.6 1.3E-15 2.8E-20 133.3 10.2 104 97-200 57-167 (326)
50 TIGR03230 lipo_lipase lipoprot 99.6 2E-14 4.4E-19 129.2 14.4 105 97-201 40-156 (442)
51 PRK13604 luxD acyl transferase 99.6 3.1E-14 6.8E-19 122.1 14.5 118 81-200 13-142 (307)
52 TIGR01607 PST-A Plasmodium sub 99.6 2E-14 4.4E-19 126.6 11.8 117 84-200 4-186 (332)
53 cd00707 Pancreat_lipase_like P 99.6 2.8E-14 6E-19 122.4 11.6 116 87-202 24-150 (275)
54 KOG2564 Predicted acetyltransf 99.5 5.3E-14 1.2E-18 116.5 10.5 101 97-198 73-181 (343)
55 TIGR01836 PHA_synth_III_C poly 99.5 4.5E-13 9.8E-18 118.9 16.5 119 82-203 42-175 (350)
56 PRK06765 homoserine O-acetyltr 99.5 9.1E-14 2E-18 124.6 11.9 118 84-201 37-198 (389)
57 PRK11071 esterase YqiA; Provis 99.5 1.2E-13 2.5E-18 112.2 11.4 88 99-200 2-94 (190)
58 COG0596 MhpC Predicted hydrola 99.5 5.9E-13 1.3E-17 110.2 13.9 114 85-200 7-124 (282)
59 TIGR01838 PHA_synth_I poly(R)- 99.5 5.5E-13 1.2E-17 123.2 13.5 115 90-204 177-307 (532)
60 PRK10566 esterase; Provisional 99.5 6.4E-13 1.4E-17 112.1 12.7 107 90-196 15-139 (249)
61 PF12695 Abhydrolase_5: Alpha/ 99.5 5E-13 1.1E-17 103.0 10.6 91 100-198 1-94 (145)
62 COG0429 Predicted hydrolase of 99.5 5.2E-13 1.1E-17 113.7 11.2 106 97-202 74-188 (345)
63 KOG2382 Predicted alpha/beta h 99.5 1.1E-12 2.3E-17 111.9 12.2 103 97-200 51-160 (315)
64 PF06342 DUF1057: Alpha/beta h 99.4 1.3E-11 2.8E-16 103.2 18.2 103 100-204 37-142 (297)
65 KOG1552 Predicted alpha/beta h 99.4 9.5E-13 2.1E-17 108.6 9.7 101 98-200 60-164 (258)
66 PLN02872 triacylglycerol lipas 99.4 4.8E-13 1E-17 120.0 8.7 127 75-202 42-200 (395)
67 PF00561 Abhydrolase_1: alpha/ 99.4 6.5E-13 1.4E-17 109.6 8.8 74 125-198 1-78 (230)
68 TIGR03502 lipase_Pla1_cef extr 99.4 5.8E-12 1.3E-16 120.1 14.5 122 79-200 419-602 (792)
69 PLN00021 chlorophyllase 99.4 2.8E-12 6.1E-17 111.7 10.3 100 96-199 50-166 (313)
70 TIGR01840 esterase_phb esteras 99.4 5.7E-12 1.2E-16 104.0 11.0 104 97-200 12-131 (212)
71 PRK07868 acyl-CoA synthetase; 99.4 5.4E-11 1.2E-15 118.9 19.7 103 97-202 66-180 (994)
72 TIGR00976 /NonD putative hydro 99.4 4.6E-12 9.9E-17 119.0 10.9 118 84-202 3-135 (550)
73 TIGR02821 fghA_ester_D S-formy 99.3 5E-11 1.1E-15 102.4 12.8 105 97-201 41-175 (275)
74 PF00975 Thioesterase: Thioest 99.3 8.4E-11 1.8E-15 97.8 13.0 100 99-200 1-105 (229)
75 PLN02442 S-formylglutathione h 99.2 1.7E-10 3.6E-15 99.6 13.1 105 97-201 46-180 (283)
76 KOG4391 Predicted alpha/beta h 99.2 1.8E-11 4E-16 98.1 6.5 125 77-201 54-186 (300)
77 KOG1838 Alpha/beta hydrolase [ 99.2 1.2E-10 2.6E-15 102.6 12.2 102 97-198 124-235 (409)
78 COG2021 MET2 Homoserine acetyl 99.2 1.8E-10 3.9E-15 99.8 9.8 118 84-201 32-184 (368)
79 PF12146 Hydrolase_4: Putative 99.2 2.1E-10 4.6E-15 79.3 8.2 73 87-159 1-79 (79)
80 PRK11460 putative hydrolase; P 99.1 5.4E-10 1.2E-14 93.6 11.5 102 97-198 15-137 (232)
81 PF03096 Ndr: Ndr family; Int 99.1 5.6E-09 1.2E-13 88.4 16.7 117 84-200 5-135 (283)
82 KOG2931 Differentiation-relate 99.1 3.8E-09 8.2E-14 88.6 14.9 115 88-202 32-160 (326)
83 PF07819 PGAP1: PGAP1-like pro 99.1 1.2E-09 2.7E-14 90.8 11.5 104 97-200 3-124 (225)
84 KOG2565 Predicted hydrolases o 99.1 7.1E-10 1.5E-14 95.5 9.8 114 84-197 130-262 (469)
85 PF05448 AXE1: Acetyl xylan es 99.1 3.5E-09 7.6E-14 92.6 13.6 118 81-199 60-209 (320)
86 COG1506 DAP2 Dipeptidyl aminop 99.0 2E-09 4.3E-14 102.5 12.1 124 75-200 363-508 (620)
87 PRK10162 acetyl esterase; Prov 99.0 2.5E-09 5.5E-14 93.7 11.9 102 97-201 80-197 (318)
88 COG3208 GrsT Predicted thioest 99.0 1E-08 2.2E-13 84.3 13.3 104 97-200 6-113 (244)
89 PRK10252 entF enterobactin syn 99.0 4.2E-09 9E-14 108.3 12.7 102 96-199 1066-1171(1296)
90 TIGR01839 PHA_synth_II poly(R) 99.0 2.9E-08 6.3E-13 91.5 16.5 104 98-204 215-333 (560)
91 PF06500 DUF1100: Alpha/beta h 99.0 3.2E-09 6.9E-14 94.3 9.4 101 99-199 191-296 (411)
92 COG3319 Thioesterase domains o 99.0 9.1E-09 2E-13 86.7 11.4 100 99-200 1-104 (257)
93 COG3509 LpqC Poly(3-hydroxybut 98.9 4E-08 8.8E-13 82.8 14.3 117 83-199 40-179 (312)
94 KOG4667 Predicted esterase [Li 98.9 1.7E-08 3.6E-13 81.2 10.7 107 95-202 30-142 (269)
95 PF12740 Chlorophyllase2: Chlo 98.9 8.4E-09 1.8E-13 86.5 9.2 100 96-199 15-131 (259)
96 PF01674 Lipase_2: Lipase (cla 98.9 5E-09 1.1E-13 86.3 6.5 99 99-198 2-122 (219)
97 PF02230 Abhydrolase_2: Phosph 98.8 2.1E-08 4.6E-13 83.0 10.0 105 97-201 13-142 (216)
98 PF06821 Ser_hydrolase: Serine 98.8 1.4E-08 3E-13 80.9 8.4 89 101-200 1-92 (171)
99 PF10230 DUF2305: Uncharacteri 98.8 5.4E-08 1.2E-12 83.1 12.5 103 99-201 3-124 (266)
100 PF10503 Esterase_phd: Esteras 98.8 6.2E-08 1.3E-12 80.0 11.5 104 97-200 15-133 (220)
101 COG3458 Acetyl esterase (deace 98.8 1.3E-08 2.8E-13 84.6 7.2 117 82-199 61-210 (321)
102 PRK10115 protease 2; Provision 98.8 4.8E-08 1E-12 93.9 12.0 126 77-202 416-562 (686)
103 TIGR01849 PHB_depoly_PhaZ poly 98.8 5E-07 1.1E-11 80.9 17.5 104 99-203 103-212 (406)
104 PF00151 Lipase: Lipase; Inte 98.8 1.9E-08 4.1E-13 88.3 7.2 107 97-203 70-191 (331)
105 PF02129 Peptidase_S15: X-Pro 98.8 8.4E-08 1.8E-12 82.2 11.0 105 98-203 20-140 (272)
106 PF05728 UPF0227: Uncharacteri 98.8 9E-08 1.9E-12 77.2 10.4 87 101-201 2-93 (187)
107 PF00326 Peptidase_S9: Prolyl 98.7 2.7E-08 5.8E-13 82.0 7.2 89 114-202 3-102 (213)
108 COG0400 Predicted esterase [Ge 98.7 7.7E-08 1.7E-12 78.7 8.9 106 98-203 18-138 (207)
109 PLN02733 phosphatidylcholine-s 98.7 1.2E-07 2.7E-12 86.1 10.6 91 109-199 105-201 (440)
110 PF07224 Chlorophyllase: Chlor 98.7 1.5E-07 3.2E-12 78.1 9.1 103 96-202 44-160 (307)
111 PF01738 DLH: Dienelactone hyd 98.6 2.2E-07 4.9E-12 76.8 9.6 100 97-197 13-130 (218)
112 PF06028 DUF915: Alpha/beta hy 98.6 3.1E-07 6.6E-12 77.6 9.6 107 97-203 10-147 (255)
113 COG0412 Dienelactone hydrolase 98.6 2.3E-06 4.9E-11 71.8 14.6 102 99-201 28-148 (236)
114 COG4757 Predicted alpha/beta h 98.6 1.9E-07 4.2E-12 76.0 7.5 116 84-201 12-140 (281)
115 PRK05371 x-prolyl-dipeptidyl a 98.6 7.3E-07 1.6E-11 86.6 12.1 83 117-200 271-374 (767)
116 PF07859 Abhydrolase_3: alpha/ 98.5 2.2E-07 4.8E-12 76.2 6.6 94 101-201 1-112 (211)
117 COG2945 Predicted hydrolase of 98.5 1.5E-06 3.3E-11 68.9 10.6 101 97-200 27-138 (210)
118 COG3571 Predicted hydrolase of 98.5 2.7E-06 5.7E-11 65.6 10.5 102 100-201 16-126 (213)
119 PF05990 DUF900: Alpha/beta hy 98.5 1.3E-06 2.7E-11 73.2 9.6 104 97-200 17-138 (233)
120 PF03403 PAF-AH_p_II: Platelet 98.5 5.4E-07 1.2E-11 80.7 7.8 104 96-200 98-263 (379)
121 PF05057 DUF676: Putative seri 98.4 6E-07 1.3E-11 74.4 7.3 84 99-183 5-97 (217)
122 COG1075 LipA Predicted acetylt 98.4 7.2E-07 1.6E-11 78.7 8.2 101 98-200 59-165 (336)
123 KOG2624 Triglyceride lipase-ch 98.4 6.1E-07 1.3E-11 80.3 7.7 127 75-201 46-201 (403)
124 smart00824 PKS_TE Thioesterase 98.4 3.8E-06 8.3E-11 68.0 11.8 95 103-199 2-102 (212)
125 COG3545 Predicted esterase of 98.4 2.6E-06 5.6E-11 66.7 9.9 90 99-199 3-94 (181)
126 PF05677 DUF818: Chlamydia CHL 98.4 2.2E-06 4.7E-11 74.0 9.6 101 83-186 117-237 (365)
127 PTZ00472 serine carboxypeptida 98.4 6.3E-06 1.4E-10 75.8 12.4 115 87-201 60-218 (462)
128 PF12715 Abhydrolase_7: Abhydr 98.4 7.5E-07 1.6E-11 78.3 6.0 100 98-198 115-259 (390)
129 COG4814 Uncharacterized protei 98.3 6.4E-06 1.4E-10 68.1 10.9 102 99-200 46-177 (288)
130 PF02273 Acyl_transf_2: Acyl t 98.3 1.1E-05 2.3E-10 66.6 11.1 113 85-199 10-134 (294)
131 KOG1553 Predicted alpha/beta h 98.3 5.1E-06 1.1E-10 71.5 9.2 98 100-199 245-345 (517)
132 COG0657 Aes Esterase/lipase [L 98.3 6.4E-06 1.4E-10 72.0 10.0 104 97-203 78-195 (312)
133 COG2936 Predicted acyl esteras 98.2 3.1E-06 6.7E-11 78.1 7.7 128 80-208 22-168 (563)
134 COG3243 PhaC Poly(3-hydroxyalk 98.2 1.4E-05 3.1E-10 70.7 10.1 106 98-206 107-224 (445)
135 PF06057 VirJ: Bacterial virul 98.2 7.1E-06 1.5E-10 65.5 7.4 96 99-199 3-107 (192)
136 PRK04940 hypothetical protein; 98.1 1.8E-05 3.9E-10 63.0 9.0 86 101-201 2-94 (180)
137 PRK10439 enterobactin/ferric e 98.1 5.3E-05 1.2E-09 68.7 12.7 102 98-199 209-323 (411)
138 PF12048 DUF3530: Protein of u 98.1 0.0006 1.3E-08 59.6 18.6 101 100-200 89-230 (310)
139 PF00756 Esterase: Putative es 98.1 1.4E-05 3E-10 67.4 8.0 52 150-201 98-152 (251)
140 COG4099 Predicted peptidase [G 98.0 2.8E-05 6.1E-10 65.8 8.8 38 163-200 268-305 (387)
141 PF08538 DUF1749: Protein of u 98.0 6.7E-05 1.5E-09 64.4 11.1 97 98-201 33-150 (303)
142 COG4188 Predicted dienelactone 98.0 2.2E-05 4.8E-10 68.7 7.5 90 97-186 70-181 (365)
143 COG4782 Uncharacterized protei 98.0 6.1E-05 1.3E-09 65.6 9.7 104 97-200 115-235 (377)
144 PF05577 Peptidase_S28: Serine 97.9 0.00021 4.5E-09 65.5 13.6 102 98-200 29-149 (434)
145 KOG1515 Arylacetamide deacetyl 97.9 0.00011 2.3E-09 64.6 10.6 103 97-202 89-210 (336)
146 PF00450 Peptidase_S10: Serine 97.9 0.00018 3.9E-09 65.2 12.4 114 87-200 23-182 (415)
147 KOG2100 Dipeptidyl aminopeptid 97.8 0.00018 4E-09 70.0 11.8 119 82-202 502-647 (755)
148 COG3150 Predicted esterase [Ge 97.8 0.00012 2.7E-09 56.9 8.4 90 101-201 2-93 (191)
149 KOG2281 Dipeptidyl aminopeptid 97.8 0.00012 2.5E-09 67.9 9.3 102 98-199 642-762 (867)
150 KOG3975 Uncharacterized conser 97.8 0.00053 1.1E-08 56.9 12.1 103 97-199 28-147 (301)
151 PLN02606 palmitoyl-protein thi 97.8 0.00031 6.6E-09 60.3 11.2 98 98-199 26-132 (306)
152 KOG3724 Negative regulator of 97.8 0.0006 1.3E-08 64.8 13.5 99 97-198 88-219 (973)
153 PF09752 DUF2048: Uncharacteri 97.8 0.00018 4E-09 62.8 9.2 102 97-198 91-209 (348)
154 PLN02633 palmitoyl protein thi 97.7 0.00052 1.1E-08 59.0 11.1 98 98-199 25-131 (314)
155 PF03959 FSH1: Serine hydrolas 97.7 0.00048 1.1E-08 56.8 10.5 103 97-200 3-146 (212)
156 KOG2112 Lysophospholipase [Lip 97.7 0.00021 4.6E-09 57.6 7.5 102 99-200 4-129 (206)
157 KOG3847 Phospholipase A2 (plat 97.6 7.5E-05 1.6E-09 63.7 4.7 102 97-199 117-275 (399)
158 PF10340 DUF2424: Protein of u 97.6 0.00072 1.6E-08 59.9 10.9 104 98-202 122-238 (374)
159 cd00312 Esterase_lipase Estera 97.6 0.00028 6.1E-09 65.6 8.2 103 97-201 94-215 (493)
160 PF02450 LCAT: Lecithin:choles 97.5 0.00071 1.5E-08 61.1 10.2 79 113-199 66-160 (389)
161 KOG2541 Palmitoyl protein thio 97.5 0.0015 3.2E-08 54.8 10.3 97 99-198 24-127 (296)
162 PF02089 Palm_thioest: Palmito 97.5 0.00042 9.1E-09 59.0 7.2 101 98-199 5-116 (279)
163 KOG4627 Kynurenine formamidase 97.4 0.00071 1.5E-08 54.6 7.3 98 97-200 66-173 (270)
164 KOG2183 Prolylcarboxypeptidase 97.4 0.0033 7.2E-08 55.8 12.0 100 99-198 81-201 (492)
165 PF04301 DUF452: Protein of un 97.3 0.014 3.1E-07 47.8 13.8 83 98-203 11-94 (213)
166 COG0627 Predicted esterase [Ge 97.3 0.00085 1.8E-08 58.6 7.0 58 145-202 127-190 (316)
167 PF11339 DUF3141: Protein of u 97.1 0.017 3.6E-07 53.0 13.8 82 117-203 93-179 (581)
168 cd00741 Lipase Lipase. Lipase 97.1 0.0017 3.6E-08 50.5 6.4 50 151-200 11-68 (153)
169 PF03583 LIP: Secretory lipase 97.0 0.0031 6.6E-08 54.6 7.8 84 117-201 19-115 (290)
170 KOG3101 Esterase D [General fu 97.0 0.00073 1.6E-08 54.7 3.4 105 98-202 44-179 (283)
171 PF00135 COesterase: Carboxyle 96.9 0.0035 7.6E-08 58.6 8.3 102 98-200 125-246 (535)
172 KOG4840 Predicted hydrolases o 96.9 0.0023 4.9E-08 52.3 5.5 99 99-200 37-145 (299)
173 COG2382 Fes Enterochelin ester 96.9 0.0053 1.2E-07 52.5 7.9 103 97-202 97-215 (299)
174 PF01764 Lipase_3: Lipase (cla 96.8 0.003 6.4E-08 48.1 5.4 35 150-184 50-84 (140)
175 PF11144 DUF2920: Protein of u 96.7 0.019 4.2E-07 51.3 10.6 36 165-200 185-220 (403)
176 COG2272 PnbA Carboxylesterase 96.6 0.0063 1.4E-07 55.4 7.0 114 86-200 78-218 (491)
177 PLN02209 serine carboxypeptida 96.6 0.054 1.2E-06 49.6 13.1 114 87-200 51-213 (437)
178 PF11187 DUF2974: Protein of u 96.6 0.0063 1.4E-07 50.6 6.3 47 154-201 75-125 (224)
179 PF08840 BAAT_C: BAAT / Acyl-C 96.5 0.007 1.5E-07 49.9 6.4 52 151-203 6-60 (213)
180 COG3946 VirJ Type IV secretory 96.5 0.011 2.4E-07 52.4 7.6 83 99-186 261-348 (456)
181 KOG3043 Predicted hydrolase re 96.4 0.013 2.8E-07 48.0 6.8 120 79-199 19-154 (242)
182 KOG2182 Hydrolytic enzymes of 96.2 0.022 4.9E-07 51.8 8.0 103 97-199 85-207 (514)
183 PLN03016 sinapoylglucose-malat 96.2 0.068 1.5E-06 48.9 11.2 113 87-199 49-210 (433)
184 PF06259 Abhydrolase_8: Alpha/ 96.1 0.025 5.4E-07 45.2 7.1 54 148-201 88-146 (177)
185 COG2819 Predicted hydrolase of 96.1 0.013 2.8E-07 49.5 5.5 38 162-199 135-172 (264)
186 KOG3967 Uncharacterized conser 96.1 0.068 1.5E-06 43.6 9.3 101 98-198 101-226 (297)
187 PF07082 DUF1350: Protein of u 96.1 0.054 1.2E-06 45.3 9.1 90 100-198 19-124 (250)
188 PF05576 Peptidase_S37: PS-10 96.0 0.066 1.4E-06 47.9 9.9 104 97-201 62-171 (448)
189 PLN02517 phosphatidylcholine-s 96.0 0.02 4.3E-07 53.6 6.6 82 113-199 157-263 (642)
190 cd00519 Lipase_3 Lipase (class 95.9 0.013 2.9E-07 48.7 5.0 23 162-184 126-148 (229)
191 PF01083 Cutinase: Cutinase; 95.9 0.026 5.7E-07 45.2 6.2 75 125-201 40-124 (179)
192 PLN02162 triacylglycerol lipas 95.7 0.031 6.8E-07 50.9 6.8 33 151-183 265-297 (475)
193 COG2939 Carboxypeptidase C (ca 95.7 0.042 9.2E-07 50.3 7.5 104 97-200 100-237 (498)
194 KOG2551 Phospholipase/carboxyh 95.7 0.11 2.5E-06 42.5 9.1 101 98-200 5-148 (230)
195 PLN00413 triacylglycerol lipas 95.6 0.04 8.7E-07 50.3 6.8 35 149-183 269-303 (479)
196 KOG2369 Lecithin:cholesterol a 95.5 0.026 5.6E-07 51.2 5.5 85 113-198 125-224 (473)
197 KOG1282 Serine carboxypeptidas 95.2 0.48 1E-05 43.5 12.7 119 82-201 48-215 (454)
198 PF06441 EHN: Epoxide hydrolas 95.1 0.04 8.6E-07 40.6 4.5 37 81-117 71-111 (112)
199 PLN02454 triacylglycerol lipas 95.1 0.04 8.6E-07 49.6 5.3 20 165-184 229-248 (414)
200 PLN02571 triacylglycerol lipas 95.1 0.036 7.8E-07 50.0 5.0 37 148-184 208-246 (413)
201 COG1505 Serine proteases of th 95.0 0.016 3.4E-07 53.9 2.6 122 78-199 395-535 (648)
202 KOG1202 Animal-type fatty acid 95.0 0.16 3.5E-06 51.2 9.3 96 97-201 2122-2221(2376)
203 PF11288 DUF3089: Protein of u 94.9 0.065 1.4E-06 43.8 5.5 66 120-185 41-116 (207)
204 KOG4372 Predicted alpha/beta h 94.9 0.036 7.7E-07 49.4 4.2 84 99-182 81-168 (405)
205 PLN02408 phospholipase A1 94.7 0.057 1.2E-06 48.0 5.0 34 151-184 185-220 (365)
206 COG1770 PtrB Protease II [Amin 94.5 0.2 4.3E-06 47.4 8.4 118 85-202 427-565 (682)
207 KOG2237 Predicted serine prote 94.5 0.038 8.2E-07 51.9 3.7 104 96-199 468-584 (712)
208 COG4947 Uncharacterized protei 94.4 0.12 2.5E-06 40.8 5.5 111 88-200 15-137 (227)
209 KOG1551 Uncharacterized conser 94.3 0.42 9.2E-06 40.4 9.1 101 97-197 112-228 (371)
210 PLN02934 triacylglycerol lipas 94.1 0.083 1.8E-06 48.7 5.0 34 150-183 307-340 (515)
211 PF04083 Abhydro_lipase: Parti 93.9 0.061 1.3E-06 35.2 2.7 38 77-114 12-59 (63)
212 PLN02310 triacylglycerol lipas 93.8 0.19 4.1E-06 45.3 6.5 36 149-184 190-229 (405)
213 PLN02324 triacylglycerol lipas 93.8 0.11 2.4E-06 46.9 5.0 34 151-184 200-235 (415)
214 PF05277 DUF726: Protein of un 93.7 0.22 4.8E-06 44.0 6.7 39 162-200 218-261 (345)
215 PLN02802 triacylglycerol lipas 93.6 0.11 2.5E-06 47.8 4.8 35 150-184 314-350 (509)
216 PLN02753 triacylglycerol lipas 93.2 0.15 3.2E-06 47.3 4.8 34 150-183 293-331 (531)
217 PF07519 Tannase: Tannase and 93.0 0.43 9.3E-06 44.3 7.8 84 117-201 52-152 (474)
218 KOG1516 Carboxylesterase and r 92.9 0.4 8.6E-06 45.2 7.6 104 98-201 112-234 (545)
219 PLN03037 lipase class 3 family 92.8 0.17 3.8E-06 46.7 4.8 36 149-184 299-338 (525)
220 PLN02719 triacylglycerol lipas 92.6 0.19 4.2E-06 46.4 4.8 34 151-184 280-318 (518)
221 PLN02761 lipase class 3 family 92.5 0.21 4.6E-06 46.2 4.9 34 150-183 274-313 (527)
222 KOG4569 Predicted lipase [Lipi 92.4 0.2 4.4E-06 44.3 4.6 37 148-184 155-191 (336)
223 KOG3253 Predicted alpha/beta h 91.8 0.2 4.2E-06 47.0 3.8 101 98-204 176-291 (784)
224 PLN02213 sinapoylglucose-malat 91.2 0.94 2E-05 39.8 7.5 76 125-200 2-97 (319)
225 PLN02847 triacylglycerol lipas 90.2 0.52 1.1E-05 44.4 5.0 21 164-184 251-271 (633)
226 TIGR03712 acc_sec_asp2 accesso 90.1 2.7 5.7E-05 38.8 9.3 119 77-200 265-391 (511)
227 KOG4540 Putative lipase essent 88.4 1 2.2E-05 38.5 5.1 25 162-186 274-298 (425)
228 COG5153 CVT17 Putative lipase 88.4 1 2.2E-05 38.5 5.1 25 162-186 274-298 (425)
229 COG2830 Uncharacterized protei 86.9 3.4 7.5E-05 32.4 6.8 79 100-201 13-92 (214)
230 PF05705 DUF829: Eukaryotic pr 86.7 10 0.00022 31.5 10.4 98 100-200 1-113 (240)
231 COG4553 DepA Poly-beta-hydroxy 85.2 11 0.00024 32.6 9.6 101 99-200 104-210 (415)
232 PF08237 PE-PPE: PE-PPE domain 85.1 4.3 9.2E-05 33.8 7.1 41 144-184 26-68 (225)
233 KOG4388 Hormone-sensitive lipa 79.4 7.5 0.00016 36.8 6.9 99 100-201 398-510 (880)
234 PF09949 DUF2183: Uncharacteri 79.2 21 0.00045 25.6 9.5 82 113-194 12-97 (100)
235 KOG2029 Uncharacterized conser 77.9 7.9 0.00017 36.7 6.7 36 163-198 525-571 (697)
236 PRK12467 peptide synthase; Pro 75.4 25 0.00054 41.6 11.2 98 99-198 3693-3794(3956)
237 COG1448 TyrB Aspartate/tyrosin 73.9 21 0.00046 32.0 8.0 86 99-198 172-264 (396)
238 PF10518 TAT_signal: TAT (twin 73.7 5.6 0.00012 20.9 2.8 20 40-59 2-21 (26)
239 KOG1283 Serine carboxypeptidas 69.9 33 0.00072 30.2 8.1 103 97-199 30-166 (414)
240 KOG2385 Uncharacterized conser 69.0 13 0.00027 34.7 5.7 41 161-201 444-489 (633)
241 TIGR01626 ytfJ_HI0045 conserve 68.4 22 0.00049 28.5 6.5 105 84-201 41-159 (184)
242 PF10081 Abhydrolase_9: Alpha/ 65.9 41 0.00089 29.0 7.8 47 153-199 95-147 (289)
243 smart00827 PKS_AT Acyl transfe 63.5 9.4 0.0002 32.7 3.8 29 155-183 73-101 (298)
244 PRK13728 conjugal transfer pro 62.7 57 0.0012 26.2 7.7 54 79-135 55-110 (181)
245 TIGR03131 malonate_mdcH malona 60.4 12 0.00026 32.2 3.9 30 154-183 66-95 (295)
246 PF00698 Acyl_transf_1: Acyl t 59.2 7 0.00015 34.1 2.2 30 154-183 74-103 (318)
247 cd01714 ETF_beta The electron 56.9 59 0.0013 26.4 7.2 63 125-195 78-145 (202)
248 TIGR00128 fabD malonyl CoA-acy 55.7 15 0.00032 31.3 3.7 28 156-183 74-102 (290)
249 COG3673 Uncharacterized conser 54.0 1E+02 0.0022 27.4 8.2 86 99-184 32-142 (423)
250 PF09994 DUF2235: Uncharacteri 51.0 1.1E+02 0.0023 26.3 8.1 23 163-185 91-113 (277)
251 PF05984 Cytomega_UL20A: Cytom 50.9 23 0.0005 24.3 3.1 11 124-134 68-78 (100)
252 cd07198 Patatin Patatin-like p 50.5 30 0.00065 27.1 4.4 34 153-186 15-48 (172)
253 PF10142 PhoPQ_related: PhoPQ- 49.9 61 0.0013 29.1 6.6 35 162-197 170-204 (367)
254 PRK03147 thiol-disulfide oxido 48.4 86 0.0019 24.1 6.8 54 79-132 43-102 (173)
255 COG1752 RssA Predicted esteras 47.7 28 0.0006 30.3 4.1 35 152-186 27-61 (306)
256 PRK10279 hypothetical protein; 47.4 29 0.00064 30.2 4.2 34 153-186 22-55 (300)
257 cd07225 Pat_PNPLA6_PNPLA7 Pata 47.2 32 0.00069 30.0 4.4 62 113-185 3-64 (306)
258 PF07172 GRP: Glycine rich pro 44.9 22 0.00048 25.2 2.5 16 43-58 4-19 (95)
259 cd07207 Pat_ExoU_VipD_like Exo 43.5 41 0.00089 26.7 4.2 33 153-185 16-48 (194)
260 cd07227 Pat_Fungal_NTE1 Fungal 43.0 40 0.00087 28.8 4.3 33 153-185 27-59 (269)
261 PF03283 PAE: Pectinacetyleste 42.3 1.2E+02 0.0026 27.2 7.3 37 163-199 155-195 (361)
262 COG3933 Transcriptional antite 41.5 1.8E+02 0.0038 27.0 8.1 71 99-179 110-180 (470)
263 COG1073 Hydrolases of the alph 41.1 22 0.00048 29.6 2.4 35 98-132 49-84 (299)
264 COG1073 Hydrolases of the alph 41.0 1 2.2E-05 37.9 -5.8 100 98-197 88-197 (299)
265 cd07210 Pat_hypo_W_succinogene 40.9 50 0.0011 27.2 4.5 32 154-185 18-49 (221)
266 TIGR02816 pfaB_fam PfaB family 40.2 35 0.00077 32.3 3.8 31 155-185 255-286 (538)
267 cd07209 Pat_hypo_Ecoli_Z1214_l 38.3 54 0.0012 26.8 4.2 34 153-186 15-48 (215)
268 PRK15488 thiosulfate reductase 37.8 2.4E+02 0.0052 28.0 9.3 20 39-58 2-21 (759)
269 KOG0781 Signal recognition par 35.7 1.2E+02 0.0025 28.5 6.1 86 102-195 442-538 (587)
270 PF00448 SRP54: SRP54-type pro 35.5 2.4E+02 0.0051 22.7 7.6 74 114-195 72-148 (196)
271 PRK06215 hypothetical protein; 35.0 83 0.0018 26.4 4.7 14 83-96 47-60 (238)
272 cd07228 Pat_NTE_like_bacteria 35.0 59 0.0013 25.5 3.9 33 154-186 18-50 (175)
273 PRK14018 trifunctional thiored 34.2 4.1E+02 0.009 25.2 10.9 94 40-135 1-100 (521)
274 COG0218 Predicted GTPase [Gene 33.0 60 0.0013 26.5 3.5 12 153-164 126-137 (200)
275 PRK15412 thiol:disulfide inter 32.8 1.7E+02 0.0036 23.2 6.2 34 99-132 70-105 (185)
276 PF00326 Peptidase_S9: Prolyl 32.1 1.3E+02 0.0027 24.1 5.5 59 98-160 144-208 (213)
277 PF01738 DLH: Dienelactone hyd 32.0 2.5E+02 0.0054 22.5 7.3 63 99-161 146-214 (218)
278 cd07205 Pat_PNPLA6_PNPLA7_NTE1 30.7 93 0.002 24.2 4.4 32 154-185 18-49 (175)
279 COG0541 Ffh Signal recognition 30.3 2.6E+02 0.0057 25.8 7.4 69 119-195 176-247 (451)
280 cd07208 Pat_hypo_Ecoli_yjju_li 30.2 90 0.0019 26.3 4.4 35 153-187 15-50 (266)
281 PF06309 Torsin: Torsin; Inte 28.8 47 0.001 24.9 2.1 19 97-115 51-69 (127)
282 PRK15367 type III secretion sy 28.6 4E+02 0.0088 24.2 8.2 56 101-168 165-220 (395)
283 PF11191 DUF2782: Protein of u 28.4 2.2E+02 0.0048 20.3 6.6 23 82-104 43-66 (105)
284 COG3946 VirJ Type IV secretory 28.3 4.7E+02 0.01 24.0 9.0 100 100-199 50-157 (456)
285 PF08484 Methyltransf_14: C-me 28.2 2.1E+02 0.0045 22.3 5.8 50 148-197 51-102 (160)
286 PF11713 Peptidase_C80: Peptid 27.8 30 0.00066 27.0 1.0 45 132-176 61-116 (157)
287 COG0279 GmhA Phosphoheptose is 27.3 1.2E+02 0.0027 24.0 4.3 72 102-176 44-121 (176)
288 cd07230 Pat_TGL4-5_like Triacy 27.1 66 0.0014 29.5 3.2 37 153-189 90-126 (421)
289 COG4822 CbiK Cobalamin biosynt 26.5 3.8E+02 0.0081 22.4 7.0 57 100-169 140-199 (265)
290 TIGR01425 SRP54_euk signal rec 26.4 5.2E+02 0.011 23.9 9.0 69 118-194 175-246 (429)
291 PF07521 RMMBL: RNA-metabolisi 26.1 1.5E+02 0.0032 17.4 3.8 32 125-169 7-38 (43)
292 cd07224 Pat_like Patatin-like 25.8 1.2E+02 0.0026 25.1 4.4 34 153-186 16-51 (233)
293 COG0331 FabD (acyl-carrier-pro 25.0 85 0.0018 27.5 3.4 22 162-183 83-104 (310)
294 cd07229 Pat_TGL3_like Triacylg 24.4 82 0.0018 28.6 3.2 40 153-192 100-139 (391)
295 cd07231 Pat_SDP1-like Sugar-De 24.0 55 0.0012 28.8 2.0 33 153-185 85-117 (323)
296 PRK14582 pgaB outer membrane N 23.1 2.7E+02 0.0059 27.3 6.7 74 97-170 47-141 (671)
297 PF10399 UCR_Fe-S_N: Ubiquitin 22.8 1.2E+02 0.0026 17.8 2.7 8 41-48 10-17 (41)
298 PF02590 SPOUT_MTase: Predicte 22.7 1.2E+02 0.0026 23.6 3.5 46 120-174 63-109 (155)
299 cd07232 Pat_PLPL Patain-like p 22.7 85 0.0018 28.6 3.1 40 153-192 84-123 (407)
300 PF08802 CytB6-F_Fe-S: Cytochr 22.6 1.5E+02 0.0033 17.2 3.0 9 40-48 6-14 (39)
301 TIGR00391 hydA hydrogenase (Ni 22.4 1.5E+02 0.0032 26.7 4.3 18 38-55 13-30 (365)
302 KOG2872 Uroporphyrinogen decar 22.2 4.4E+02 0.0095 23.1 6.9 67 99-172 253-336 (359)
303 KOG1252 Cystathionine beta-syn 22.0 5.8E+02 0.012 22.8 8.7 37 160-196 299-336 (362)
304 PRK14974 cell division protein 22.0 5.6E+02 0.012 22.7 8.6 64 124-195 222-287 (336)
305 KOG2214 Predicted esterase of 21.7 1.7E+02 0.0037 27.5 4.7 42 153-194 191-232 (543)
306 COG3887 Predicted signaling pr 21.5 2.7E+02 0.0059 26.8 6.0 43 153-198 329-377 (655)
307 PF14253 AbiH: Bacteriophage a 21.3 48 0.001 27.9 1.1 15 162-176 233-247 (270)
308 PRK10081 entericidin B membran 21.3 1.4E+02 0.003 18.3 2.8 8 39-46 1-8 (48)
309 COG1506 DAP2 Dipeptidyl aminop 21.0 3.6E+02 0.0078 26.1 7.1 42 98-139 551-598 (620)
310 COG0813 DeoD Purine-nucleoside 20.7 2E+02 0.0043 24.0 4.4 38 163-202 55-96 (236)
311 cd06292 PBP1_LacI_like_10 Liga 20.5 4.8E+02 0.01 21.3 7.6 55 117-171 75-130 (273)
312 cd07204 Pat_PNPLA_like Patatin 20.4 1.8E+02 0.0038 24.4 4.4 33 154-186 17-53 (243)
313 TIGR02811 formate_TAT formate 20.3 2E+02 0.0044 18.8 3.7 9 40-48 9-17 (66)
314 cd07206 Pat_TGL3-4-5_SDP1 Tria 20.2 1.4E+02 0.003 26.0 3.7 32 154-185 87-118 (298)
No 1
>PLN02578 hydrolase
Probab=99.97 E-value=1.1e-29 Score=225.62 Aligned_cols=187 Identities=71% Similarity=1.202 Sum_probs=154.4
Q ss_pred ccCCCCCccceecCCcccCCcchhhhhhHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCceEEeeCCeEEEEEE
Q 024392 15 FLNPVCGSSRFISPGRIYQPRSKCEISRRTFVFRGIVASGASVIGSSLITEPSPGMERLPFKPEGYNFWTWRGHKIHYVV 94 (268)
Q Consensus 15 ~~~~~~~~~~~~~p~~~~~~~~~~~m~rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 94 (268)
.+++. +.-..+++++....+...||+||.+.+.+++++++.++.+.....+....+..+..+.+..+++.+|..++|..
T Consensus 4 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~Y~~ 82 (354)
T PLN02578 4 LFSSG-SNLFAIARWRSSIDRPLLGINRRIFIFGGIVASGVSVMGSSSASQSVQGLERLPFKKEGYNFWTWRGHKIHYVV 82 (354)
T ss_pred eecCC-CcceecchhhhhhhhhhhhhhhhhhhhcchhhhhchhccchhhcccccccccccccCCCceEEEECCEEEEEEE
Confidence 34443 33445667777778888888888777666665555555444443344444445666667788899999999999
Q ss_pred ccCCCcEEEECCCCCChhhHHHhHHHHHhcCeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHHhcCCCeEEEEeChH
Q 024392 95 QGEGSPVVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVKEPAVLVGNSLG 174 (268)
Q Consensus 95 ~g~~~~vv~lHG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~lvG~S~G 174 (268)
.|++++||++||++++...|..+++.|+++|+|+++|++|||.|+.+...++...+++++.+++++++.++++++|||+|
T Consensus 83 ~g~g~~vvliHG~~~~~~~w~~~~~~l~~~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~l~~~i~~~~~~~~~lvG~S~G 162 (354)
T PLN02578 83 QGEGLPIVLIHGFGASAFHWRYNIPELAKKYKVYALDLLGFGWSDKALIEYDAMVWRDQVADFVKEVVKEPAVLVGNSLG 162 (354)
T ss_pred cCCCCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCcccccCHHHHHHHHHHHHHHhccCCeEEEEECHH
Confidence 99999999999999999999999999998899999999999999988778899999999999999999899999999999
Q ss_pred HHHHHHHHHhCCCccCeEEEecCCCCCC
Q 024392 175 GFAALVAAVGLPDQVTGVALLNSAGQFG 202 (268)
Q Consensus 175 g~~a~~~a~~~p~~v~~lvl~~~~~~~~ 202 (268)
|.+++.+|.++|++++++|++++++.+.
T Consensus 163 g~ia~~~A~~~p~~v~~lvLv~~~~~~~ 190 (354)
T PLN02578 163 GFTALSTAVGYPELVAGVALLNSAGQFG 190 (354)
T ss_pred HHHHHHHHHhChHhcceEEEECCCcccc
Confidence 9999999999999999999999876554
No 2
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.93 E-value=5.5e-24 Score=184.14 Aligned_cols=121 Identities=45% Similarity=0.826 Sum_probs=111.9
Q ss_pred CceEEeeCCeEEEEEEcc-CCCcEEEECCCCCChhhHHHhHHHHHhcCeEEEEcCCCCCCCCccc-------ccCCHHHH
Q 024392 79 GYNFWTWRGHKIHYVVQG-EGSPVVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGWSEKAI-------IEYDAMVW 150 (268)
Q Consensus 79 ~~~~~~~~g~~~~~~~~g-~~~~vv~lHG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~-------~~~~~~~~ 150 (268)
..++++.+|.+++|...| ++++|||+||++++...|..+++.|+++|+|+++|+||||.|+.+. ..++++++
T Consensus 9 ~~~~~~~~~~~i~y~~~G~~~~~vlllHG~~~~~~~w~~~~~~L~~~~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~ 88 (294)
T PLN02824 9 ETRTWRWKGYNIRYQRAGTSGPALVLVHGFGGNADHWRKNTPVLAKSHRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETW 88 (294)
T ss_pred CCceEEEcCeEEEEEEcCCCCCeEEEECCCCCChhHHHHHHHHHHhCCeEEEEcCCCCCCCCCCccccccccccCCHHHH
Confidence 356789999999999988 5799999999999999999999999988999999999999998653 35789999
Q ss_pred HHHHHHHHHHhcCCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCC
Q 024392 151 KDQIVDFLKEIVKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAG 199 (268)
Q Consensus 151 ~~~~~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 199 (268)
++|+.+++++++.++++++||||||.+++.++.++|++|+++|++++..
T Consensus 89 a~~l~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~ 137 (294)
T PLN02824 89 GEQLNDFCSDVVGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISL 137 (294)
T ss_pred HHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCc
Confidence 9999999999999999999999999999999999999999999999865
No 3
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.93 E-value=4.1e-24 Score=185.02 Aligned_cols=120 Identities=30% Similarity=0.492 Sum_probs=112.9
Q ss_pred ceEEeeCCeEEEEEEccCCCcEEEECCCCCChhhHHHhHHHHHhcCeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHH
Q 024392 80 YNFWTWRGHKIHYVVQGEGSPVVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLK 159 (268)
Q Consensus 80 ~~~~~~~g~~~~~~~~g~~~~vv~lHG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~ 159 (268)
.++++.+|.+++|...|++++|||+||++++...|..+++.|+++++|+++|+||||.|+.+...++..++++|+.++++
T Consensus 9 ~~~~~~~g~~i~y~~~G~g~~vvllHG~~~~~~~w~~~~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~~a~dl~~ll~ 88 (295)
T PRK03592 9 MRRVEVLGSRMAYIETGEGDPIVFLHGNPTSSYLWRNIIPHLAGLGRCLAPDLIGMGASDKPDIDYTFADHARYLDAWFD 88 (295)
T ss_pred ceEEEECCEEEEEEEeCCCCEEEEECCCCCCHHHHHHHHHHHhhCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 34668899999999999999999999999999999999999999999999999999999887667899999999999999
Q ss_pred HhcCCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCC
Q 024392 160 EIVKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAG 199 (268)
Q Consensus 160 ~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 199 (268)
+++.++++++||||||.+++.++.++|++|+++|++++..
T Consensus 89 ~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~ 128 (295)
T PRK03592 89 ALGLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIV 128 (295)
T ss_pred HhCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCC
Confidence 9999999999999999999999999999999999999843
No 4
>PRK06489 hypothetical protein; Provisional
Probab=99.91 E-value=3.3e-23 Score=184.52 Aligned_cols=116 Identities=24% Similarity=0.333 Sum_probs=99.3
Q ss_pred eeCCeEEEEEEccC---------CCcEEEECCCCCChhhHH--HhHHHH--------HhcCeEEEEcCCCCCCCCcccc-
Q 024392 84 TWRGHKIHYVVQGE---------GSPVVLIHGFGASAFHWR--YNIPEL--------AKRYKVYAVDLLGFGWSEKAII- 143 (268)
Q Consensus 84 ~~~g~~~~~~~~g~---------~~~vv~lHG~~~~~~~~~--~~~~~l--------~~~~~v~~~d~~G~G~s~~~~~- 143 (268)
+.+|.+++|...|+ +|+|||+||++++...|. .+.+.| +++|+|+++|+||||.|+.+..
T Consensus 46 ~~~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~ 125 (360)
T PRK06489 46 TLPELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDG 125 (360)
T ss_pred CcCCceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcC
Confidence 57899999999986 789999999999988875 444444 5569999999999999976532
Q ss_pred ------cCCHHHHHHHHHHHH-HHhcCCCeE-EEEeChHHHHHHHHHHhCCCccCeEEEecCCC
Q 024392 144 ------EYDAMVWKDQIVDFL-KEIVKEPAV-LVGNSLGGFAALVAAVGLPDQVTGVALLNSAG 199 (268)
Q Consensus 144 ------~~~~~~~~~~~~~~l-~~~~~~~~~-lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 199 (268)
.++++++++++.+++ +++++++++ ++||||||++++.++.++|++|+++|++++.+
T Consensus 126 ~~~~~~~~~~~~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~ 189 (360)
T PRK06489 126 LRAAFPRYDYDDMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQP 189 (360)
T ss_pred CCCCCCcccHHHHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCc
Confidence 478899999988855 889999985 89999999999999999999999999998864
No 5
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.91 E-value=6.7e-23 Score=178.14 Aligned_cols=120 Identities=28% Similarity=0.474 Sum_probs=109.2
Q ss_pred CceEEeeCC-----eEEEEEEccC--CCcEEEECCCCCChhhHHHhHHHHHhc-CeEEEEcCCCCCCCCccc--ccCCHH
Q 024392 79 GYNFWTWRG-----HKIHYVVQGE--GSPVVLIHGFGASAFHWRYNIPELAKR-YKVYAVDLLGFGWSEKAI--IEYDAM 148 (268)
Q Consensus 79 ~~~~~~~~g-----~~~~~~~~g~--~~~vv~lHG~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~--~~~~~~ 148 (268)
...++++++ .+++|...|+ +|+|||+||++++...|..+++.|++. |+|+++|+||||.|+.+. ..++.+
T Consensus 20 ~~~~~~~~~~~~~~~~i~y~~~G~~~~~~lvliHG~~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~~~~ 99 (302)
T PRK00870 20 APHYVDVDDGDGGPLRMHYVDEGPADGPPVLLLHGEPSWSYLYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRREDYTYA 99 (302)
T ss_pred CceeEeecCCCCceEEEEEEecCCCCCCEEEEECCCCCchhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCcccCCHH
Confidence 556778888 8899999884 789999999999999999999999876 999999999999997653 357899
Q ss_pred HHHHHHHHHHHHhcCCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCC
Q 024392 149 VWKDQIVDFLKEIVKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSA 198 (268)
Q Consensus 149 ~~~~~~~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~ 198 (268)
++++|+.+++++++.++++++||||||.+++.++.++|++|+++|++++.
T Consensus 100 ~~a~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 149 (302)
T PRK00870 100 RHVEWMRSWFEQLDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTG 149 (302)
T ss_pred HHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCC
Confidence 99999999999999999999999999999999999999999999999875
No 6
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.90 E-value=2.3e-22 Score=179.09 Aligned_cols=122 Identities=51% Similarity=0.945 Sum_probs=109.6
Q ss_pred CceEEeeCCe-EEEEEEccCC------CcEEEECCCCCChhhHHHhHHHHHhcCeEEEEcCCCCCCCCccc-ccCCHHHH
Q 024392 79 GYNFWTWRGH-KIHYVVQGEG------SPVVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGWSEKAI-IEYDAMVW 150 (268)
Q Consensus 79 ~~~~~~~~g~-~~~~~~~g~~------~~vv~lHG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~-~~~~~~~~ 150 (268)
...++..+|. +++|...|++ |+|||+||++++...|..+++.|+++|+|+++|+||||.|+.+. ..++.+++
T Consensus 62 ~~~~~~~~g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~w~~~~~~L~~~~~via~Dl~G~G~S~~~~~~~~~~~~~ 141 (360)
T PLN02679 62 RCKKWKWKGEYSINYLVKGSPEVTSSGPPVLLVHGFGASIPHWRRNIGVLAKNYTVYAIDLLGFGASDKPPGFSYTMETW 141 (360)
T ss_pred cCceEEECCceeEEEEEecCcccCCCCCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCCCCccccHHHH
Confidence 4456677887 9999998866 89999999999999999999999888999999999999998753 46789999
Q ss_pred HHHHHHHHHHhcCCCeEEEEeChHHHHHHHHHH-hCCCccCeEEEecCCCC
Q 024392 151 KDQIVDFLKEIVKEPAVLVGNSLGGFAALVAAV-GLPDQVTGVALLNSAGQ 200 (268)
Q Consensus 151 ~~~~~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~-~~p~~v~~lvl~~~~~~ 200 (268)
++++.+++++++.++++|+||||||.+++.++. .+|++|+++|++++.+.
T Consensus 142 a~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~ 192 (360)
T PLN02679 142 AELILDFLEEVVQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGG 192 (360)
T ss_pred HHHHHHHHHHhcCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccc
Confidence 999999999999999999999999999999887 47999999999998754
No 7
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.89 E-value=3.2e-22 Score=169.61 Aligned_cols=108 Identities=30% Similarity=0.491 Sum_probs=93.2
Q ss_pred EEEEEEccCCC-cEEEECCCCCChhhHHHhHHHHHhcCeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHHhcCCCeE
Q 024392 89 KIHYVVQGEGS-PVVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVKEPAV 167 (268)
Q Consensus 89 ~~~~~~~g~~~-~vv~lHG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 167 (268)
.++|...|+++ +|||+||++++...|..+++.|.++|+|+++|+||||.|+.. ..++.+++++++. +++.++++
T Consensus 3 ~~~y~~~G~g~~~ivllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~-~~~~~~~~~~~l~----~~~~~~~~ 77 (256)
T PRK10349 3 NIWWQTKGQGNVHLVLLHGWGLNAEVWRCIDEELSSHFTLHLVDLPGFGRSRGF-GALSLADMAEAVL----QQAPDKAI 77 (256)
T ss_pred ccchhhcCCCCCeEEEECCCCCChhHHHHHHHHHhcCCEEEEecCCCCCCCCCC-CCCCHHHHHHHHH----hcCCCCeE
Confidence 46788888886 599999999999999999999998899999999999999764 3567766666554 35678999
Q ss_pred EEEeChHHHHHHHHHHhCCCccCeEEEecCCCCC
Q 024392 168 LVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQF 201 (268)
Q Consensus 168 lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 201 (268)
++||||||.+++.++.++|++|+++|++++++..
T Consensus 78 lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~ 111 (256)
T PRK10349 78 WLGWSLGGLVASQIALTHPERVQALVTVASSPCF 111 (256)
T ss_pred EEEECHHHHHHHHHHHhChHhhheEEEecCccce
Confidence 9999999999999999999999999999986544
No 8
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.89 E-value=1e-22 Score=174.67 Aligned_cols=120 Identities=23% Similarity=0.244 Sum_probs=109.3
Q ss_pred eEEeeCCeEEEEEEc--cCC-CcEEEECCCCCChhhHHHhHHHHHhcCeEEEEcCCCCCCCCcccccCCHHHHHHHHHHH
Q 024392 81 NFWTWRGHKIHYVVQ--GEG-SPVVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDF 157 (268)
Q Consensus 81 ~~~~~~g~~~~~~~~--g~~-~~vv~lHG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~ 157 (268)
++.+.+|.+++|... +++ ++|||+||++++...|..+++.|.++|+|+++|+||||.|+.+...++.+++++|+.++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~plvllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~ 84 (276)
T TIGR02240 5 RTIDLDGQSIRTAVRPGKEGLTPLLIFNGIGANLELVFPFIEALDPDLEVIAFDVPGVGGSSTPRHPYRFPGLAKLAARM 84 (276)
T ss_pred EEeccCCcEEEEEEecCCCCCCcEEEEeCCCcchHHHHHHHHHhccCceEEEECCCCCCCCCCCCCcCcHHHHHHHHHHH
Confidence 456789999999774 333 79999999999999999999999888999999999999998766667899999999999
Q ss_pred HHHhcCCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCCC
Q 024392 158 LKEIVKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQ 200 (268)
Q Consensus 158 l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 200 (268)
+++++.++++|+||||||.+++.+|.++|++|+++|+++++..
T Consensus 85 i~~l~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~ 127 (276)
T TIGR02240 85 LDYLDYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAG 127 (276)
T ss_pred HHHhCcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCc
Confidence 9999999999999999999999999999999999999999764
No 9
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.88 E-value=2.9e-21 Score=165.70 Aligned_cols=113 Identities=31% Similarity=0.532 Sum_probs=95.4
Q ss_pred CeEEEEEEccCCCcEEEECCCCCChhhHHHh---HHHHHhc-CeEEEEcCCCCCCCCcccccC-CHHHHHHHHHHHHHHh
Q 024392 87 GHKIHYVVQGEGSPVVLIHGFGASAFHWRYN---IPELAKR-YKVYAVDLLGFGWSEKAIIEY-DAMVWKDQIVDFLKEI 161 (268)
Q Consensus 87 g~~~~~~~~g~~~~vv~lHG~~~~~~~~~~~---~~~l~~~-~~v~~~d~~G~G~s~~~~~~~-~~~~~~~~~~~~l~~~ 161 (268)
|.+++|...|++|+||++||++.+...|..+ +..+.+. |+|+++|+||||.|+...... .....++|+.++++++
T Consensus 19 ~~~~~y~~~g~~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l 98 (282)
T TIGR03343 19 NFRIHYNEAGNGEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDAL 98 (282)
T ss_pred ceeEEEEecCCCCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccchhHHHHHHHHHHc
Confidence 5779999999999999999999888777643 4455555 999999999999998653221 2224678999999999
Q ss_pred cCCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCC
Q 024392 162 VKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAG 199 (268)
Q Consensus 162 ~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 199 (268)
+.++++++||||||.+++.++.++|++++++|++++..
T Consensus 99 ~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 136 (282)
T TIGR03343 99 DIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGG 136 (282)
T ss_pred CCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCC
Confidence 99999999999999999999999999999999999864
No 10
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.87 E-value=2.8e-21 Score=166.87 Aligned_cols=120 Identities=30% Similarity=0.470 Sum_probs=109.9
Q ss_pred ceEEeeCCeEEEEEEccCCCcEEEECCCCCChhhHHHhHHHHHhcCeEEEEcCCCCCCCCccc-ccCCHHHHHHHHHHHH
Q 024392 80 YNFWTWRGHKIHYVVQGEGSPVVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGWSEKAI-IEYDAMVWKDQIVDFL 158 (268)
Q Consensus 80 ~~~~~~~g~~~~~~~~g~~~~vv~lHG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~-~~~~~~~~~~~~~~~l 158 (268)
..+++++|.+++|...|++++|||+||++.+...|..+.+.|.++|+|+++|+||||.|+.+. ..++.+++++++.+++
T Consensus 16 ~~~~~~~~~~i~y~~~G~~~~iv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~ 95 (286)
T PRK03204 16 SRWFDSSRGRIHYIDEGTGPPILLCHGNPTWSFLYRDIIVALRDRFRCVAPDYLGFGLSERPSGFGYQIDEHARVIGEFV 95 (286)
T ss_pred ceEEEcCCcEEEEEECCCCCEEEEECCCCccHHHHHHHHHHHhCCcEEEEECCCCCCCCCCCCccccCHHHHHHHHHHHH
Confidence 356788999999999999999999999999889999999999988999999999999998753 3578899999999999
Q ss_pred HHhcCCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCC
Q 024392 159 KEIVKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAG 199 (268)
Q Consensus 159 ~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 199 (268)
++++.++++++||||||.+++.++..+|++|+++|++++..
T Consensus 96 ~~~~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~ 136 (286)
T PRK03204 96 DHLGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWF 136 (286)
T ss_pred HHhCCCCEEEEEECccHHHHHHHHHhChhheeEEEEECccc
Confidence 99999999999999999999999999999999999987753
No 11
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.86 E-value=5.3e-21 Score=162.26 Aligned_cols=124 Identities=37% Similarity=0.611 Sum_probs=116.1
Q ss_pred CCCceEEeeCCeEEEEEEcc--CCCcEEEECCCCCChhhHHHhHHHHHhc-CeEEEEcCCCCCCCCccc--ccCCHHHHH
Q 024392 77 PEGYNFWTWRGHKIHYVVQG--EGSPVVLIHGFGASAFHWRYNIPELAKR-YKVYAVDLLGFGWSEKAI--IEYDAMVWK 151 (268)
Q Consensus 77 ~~~~~~~~~~g~~~~~~~~g--~~~~vv~lHG~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~--~~~~~~~~~ 151 (268)
.....+++.+|.++||...| ++|.|+++||++.+..+|+.++..|+.+ |+|+++|+||+|.|+.+. ..|+...++
T Consensus 21 ~~~hk~~~~~gI~~h~~e~g~~~gP~illlHGfPe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l~ 100 (322)
T KOG4178|consen 21 AISHKFVTYKGIRLHYVEGGPGDGPIVLLLHGFPESWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTIDELV 100 (322)
T ss_pred hcceeeEEEccEEEEEEeecCCCCCEEEEEccCCccchhhhhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeHHHHH
Confidence 34567889999999999887 6799999999999999999999999999 999999999999999874 578999999
Q ss_pred HHHHHHHHHhcCCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCCC
Q 024392 152 DQIVDFLKEIVKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQ 200 (268)
Q Consensus 152 ~~~~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 200 (268)
.|+.+++++++.++++++||+||+.+|.+++..+|++|+++|.++.+..
T Consensus 101 ~di~~lld~Lg~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~ 149 (322)
T KOG4178|consen 101 GDIVALLDHLGLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFP 149 (322)
T ss_pred HHHHHHHHHhccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCC
Confidence 9999999999999999999999999999999999999999999999876
No 12
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.86 E-value=8e-21 Score=162.02 Aligned_cols=123 Identities=26% Similarity=0.333 Sum_probs=111.9
Q ss_pred CCceEEeeCCeEEEEEEccC--CCcEEEECCCCCChhhHHHhHHHHHhcCeEEEEcCCCCCCCCcccc-cCCHHHHHHHH
Q 024392 78 EGYNFWTWRGHKIHYVVQGE--GSPVVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGWSEKAII-EYDAMVWKDQI 154 (268)
Q Consensus 78 ~~~~~~~~~g~~~~~~~~g~--~~~vv~lHG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~~ 154 (268)
...++++.+|.+++|...|+ +|+|||+||++++...|..+.+.|+++|+|+++|+||||.|+.+.. .++.+++++|+
T Consensus 6 ~~~~~~~~~~~~~~~~~~g~~~~~~vv~~hG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l 85 (278)
T TIGR03056 6 DCSRRVTVGPFHWHVQDMGPTAGPLLLLLHGTGASTHSWRDLMPPLARSFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDL 85 (278)
T ss_pred CccceeeECCEEEEEEecCCCCCCeEEEEcCCCCCHHHHHHHHHHHhhCcEEEeecCCCCCCCCCccccCCCHHHHHHHH
Confidence 34567799999999999884 7899999999999999999999999889999999999999987654 67999999999
Q ss_pred HHHHHHhcCCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCCC
Q 024392 155 VDFLKEIVKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQ 200 (268)
Q Consensus 155 ~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 200 (268)
.+++++++.++++++||||||.+++.++.++|++++++|++++...
T Consensus 86 ~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~ 131 (278)
T TIGR03056 86 SALCAAEGLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALM 131 (278)
T ss_pred HHHHHHcCCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCccc
Confidence 9999999989999999999999999999999999999999988653
No 13
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.86 E-value=1.1e-20 Score=158.52 Aligned_cols=101 Identities=24% Similarity=0.193 Sum_probs=91.4
Q ss_pred CCcEEEECCCCCChhhHHHhHHHHHhcCeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHHhcCCCeEEEEeChHHHH
Q 024392 98 GSPVVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVKEPAVLVGNSLGGFA 177 (268)
Q Consensus 98 ~~~vv~lHG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~lvG~S~Gg~~ 177 (268)
+|+|||+||++++...|..+++.|. +|+|+++|+||||.|+.+. ..+.+++++|+.+++++++.++++++||||||.+
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l~-~~~vi~~D~~G~G~S~~~~-~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~v 79 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEALP-DYPRLYIDLPGHGGSAAIS-VDGFADVSRLLSQTLQSYNILPYWLVGYSLGGRI 79 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHcC-CCCEEEecCCCCCCCCCcc-ccCHHHHHHHHHHHHHHcCCCCeEEEEECHHHHH
Confidence 5789999999999999999999884 5999999999999998754 3488999999999999999999999999999999
Q ss_pred HHHHHHhCCCc-cCeEEEecCCCC
Q 024392 178 ALVAAVGLPDQ-VTGVALLNSAGQ 200 (268)
Q Consensus 178 a~~~a~~~p~~-v~~lvl~~~~~~ 200 (268)
++.++.++|++ |++++++++.+.
T Consensus 80 a~~~a~~~~~~~v~~lvl~~~~~~ 103 (242)
T PRK11126 80 AMYYACQGLAGGLCGLIVEGGNPG 103 (242)
T ss_pred HHHHHHhCCcccccEEEEeCCCCC
Confidence 99999999764 999999987653
No 14
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.85 E-value=9.2e-21 Score=159.12 Aligned_cols=110 Identities=28% Similarity=0.487 Sum_probs=98.6
Q ss_pred EEEEcc----CCCcEEEECCCCCChhhHHHhHHHHHhcCeEEEEcCCCCCCCCcc-cccCCHHHHHHHHHHHHHHhcCCC
Q 024392 91 HYVVQG----EGSPVVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGWSEKA-IIEYDAMVWKDQIVDFLKEIVKEP 165 (268)
Q Consensus 91 ~~~~~g----~~~~vv~lHG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~-~~~~~~~~~~~~~~~~l~~~~~~~ 165 (268)
+|...| ++|+||++||++++...|..+++.|.++|+|+++|+||||.|... ...++.+++++++.+++++++.++
T Consensus 2 ~~~~~~~~~~~~~~iv~lhG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 81 (257)
T TIGR03611 2 HYELHGPPDADAPVVVLSSGLGGSGSYWAPQLDVLTQRFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDALNIER 81 (257)
T ss_pred EEEEecCCCCCCCEEEEEcCCCcchhHHHHHHHHHHhccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHhCCCc
Confidence 455555 367899999999999999999999988899999999999999764 356789999999999999999999
Q ss_pred eEEEEeChHHHHHHHHHHhCCCccCeEEEecCCCC
Q 024392 166 AVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQ 200 (268)
Q Consensus 166 ~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 200 (268)
++++||||||.+++.++.++|++++++|++++...
T Consensus 82 ~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~ 116 (257)
T TIGR03611 82 FHFVGHALGGLIGLQLALRYPERLLSLVLINAWSR 116 (257)
T ss_pred EEEEEechhHHHHHHHHHHChHHhHHheeecCCCC
Confidence 99999999999999999999999999999998654
No 15
>PRK10749 lysophospholipase L2; Provisional
Probab=99.85 E-value=8.5e-20 Score=160.74 Aligned_cols=122 Identities=18% Similarity=0.128 Sum_probs=104.5
Q ss_pred CceEEeeCCeEEEEEEcc---CCCcEEEECCCCCChhhHHHhHHHHHhc-CeEEEEcCCCCCCCCcccc------cCCHH
Q 024392 79 GYNFWTWRGHKIHYVVQG---EGSPVVLIHGFGASAFHWRYNIPELAKR-YKVYAVDLLGFGWSEKAII------EYDAM 148 (268)
Q Consensus 79 ~~~~~~~~g~~~~~~~~g---~~~~vv~lHG~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~------~~~~~ 148 (268)
...+...+|.+++|...+ .+++||++||++++...|..++..+.+. |+|+++|+||||.|+.... ..+++
T Consensus 32 ~~~~~~~~g~~l~~~~~~~~~~~~~vll~HG~~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~ 111 (330)
T PRK10749 32 EAEFTGVDDIPIRFVRFRAPHHDRVVVICPGRIESYVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFN 111 (330)
T ss_pred ceEEEcCCCCEEEEEEccCCCCCcEEEEECCccchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccccHH
Confidence 345667899999999875 3468999999999988999999887766 9999999999999975421 24788
Q ss_pred HHHHHHHHHHHHh----cCCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCCC
Q 024392 149 VWKDQIVDFLKEI----VKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQ 200 (268)
Q Consensus 149 ~~~~~~~~~l~~~----~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 200 (268)
++++|+.++++++ +..+++++||||||.+++.++.++|++++++|+++|...
T Consensus 112 ~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~ 167 (330)
T PRK10749 112 DYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFG 167 (330)
T ss_pred HHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhc
Confidence 9999999999876 567999999999999999999999999999999998654
No 16
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.85 E-value=3.8e-20 Score=164.12 Aligned_cols=122 Identities=25% Similarity=0.322 Sum_probs=102.0
Q ss_pred ceEEeeCCeEEEEEEccC-----CCcEEEECCCCCChh-hHHHhHHHHHhc-CeEEEEcCCCCCCCCccc-ccCCHHHHH
Q 024392 80 YNFWTWRGHKIHYVVQGE-----GSPVVLIHGFGASAF-HWRYNIPELAKR-YKVYAVDLLGFGWSEKAI-IEYDAMVWK 151 (268)
Q Consensus 80 ~~~~~~~g~~~~~~~~g~-----~~~vv~lHG~~~~~~-~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~-~~~~~~~~~ 151 (268)
..+.+.+|.+++|..++. .++|||+||++++.. .|..+++.|++. |+|+++|+||||.|++.. ...++++++
T Consensus 64 ~~~~~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~ 143 (349)
T PLN02385 64 SYEVNSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHGYIPSFDDLV 143 (349)
T ss_pred eeEEcCCCCEEEEEEEecCCCCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCcCCHHHHH
Confidence 345567899999887642 357999999998875 467888999876 999999999999998653 235888999
Q ss_pred HHHHHHHHHhcC------CCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCCCC
Q 024392 152 DQIVDFLKEIVK------EPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQF 201 (268)
Q Consensus 152 ~~~~~~l~~~~~------~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 201 (268)
+|+.++++.+.. .+++|+||||||.+++.++.++|++++++|+++|....
T Consensus 144 ~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~ 199 (349)
T PLN02385 144 DDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKI 199 (349)
T ss_pred HHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccc
Confidence 999999987753 27999999999999999999999999999999987654
No 17
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.84 E-value=4e-20 Score=153.98 Aligned_cols=111 Identities=30% Similarity=0.479 Sum_probs=99.5
Q ss_pred EEEEEccC---CCcEEEECCCCCChhhHHHhHHHHHhcCeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHHhcCCCe
Q 024392 90 IHYVVQGE---GSPVVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVKEPA 166 (268)
Q Consensus 90 ~~~~~~g~---~~~vv~lHG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 166 (268)
++|...|+ .|+||++||++.+...|..+++.|.++|+|+++|+||||.|+.....++.+++++|+.++++.++.+++
T Consensus 2 ~~~~~~g~~~~~~~li~~hg~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~~v 81 (251)
T TIGR02427 2 LHYRLDGAADGAPVLVFINSLGTDLRMWDPVLPALTPDFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLALLDHLGIERA 81 (251)
T ss_pred ceEEeecCCCCCCeEEEEcCcccchhhHHHHHHHhhcccEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCce
Confidence 45665553 468999999999999999999999878999999999999998766678999999999999999998999
Q ss_pred EEEEeChHHHHHHHHHHhCCCccCeEEEecCCCC
Q 024392 167 VLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQ 200 (268)
Q Consensus 167 ~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 200 (268)
+++|||+||.+++.++.++|++++++|++++...
T Consensus 82 ~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~ 115 (251)
T TIGR02427 82 VFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAK 115 (251)
T ss_pred EEEEeCchHHHHHHHHHHCHHHhHHHhhccCccc
Confidence 9999999999999999999999999999987654
No 18
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.84 E-value=1.1e-20 Score=154.74 Aligned_cols=100 Identities=35% Similarity=0.604 Sum_probs=92.7
Q ss_pred EEEECCCCCChhhHHHhHHHHHhcCeEEEEcCCCCCCCCccc--ccCCHHHHHHHHHHHHHHhcCCCeEEEEeChHHHHH
Q 024392 101 VVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGWSEKAI--IEYDAMVWKDQIVDFLKEIVKEPAVLVGNSLGGFAA 178 (268)
Q Consensus 101 vv~lHG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~lvG~S~Gg~~a 178 (268)
|||+||++++...|..+++.|+++|+|+++|+||+|.|+... ..++.+++++|+.+++++++.++++++|||+||.++
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~~a 80 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALARGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALGIKKVILVGHSMGGMIA 80 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHHTTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTTSSEEEEEETHHHHHH
T ss_pred eEEECCCCCCHHHHHHHHHHHhCCCEEEEEecCCccccccccccCCcchhhhhhhhhhcccccccccccccccccccccc
Confidence 799999999999999999999766999999999999998765 467899999999999999999999999999999999
Q ss_pred HHHHHhCCCccCeEEEecCCCC
Q 024392 179 LVAAVGLPDQVTGVALLNSAGQ 200 (268)
Q Consensus 179 ~~~a~~~p~~v~~lvl~~~~~~ 200 (268)
+.++.++|++|+++|++++...
T Consensus 81 ~~~a~~~p~~v~~~vl~~~~~~ 102 (228)
T PF12697_consen 81 LRLAARYPDRVKGLVLLSPPPP 102 (228)
T ss_dssp HHHHHHSGGGEEEEEEESESSS
T ss_pred cccccccccccccceeeccccc
Confidence 9999999999999999999864
No 19
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.84 E-value=5.1e-20 Score=164.39 Aligned_cols=118 Identities=28% Similarity=0.425 Sum_probs=108.8
Q ss_pred EEeeCCeEEEEEEccC--CCcEEEECCCCCChhhHHHhHHHHHhcCeEEEEcCCCCCCCCcccc----cCCHHHHHHHHH
Q 024392 82 FWTWRGHKIHYVVQGE--GSPVVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGWSEKAII----EYDAMVWKDQIV 155 (268)
Q Consensus 82 ~~~~~g~~~~~~~~g~--~~~vv~lHG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~----~~~~~~~~~~~~ 155 (268)
..+.+|.+++|...|+ +++|||+||++.+...|..+++.|+++|+|+++|+||||.|+.+.. .++.+++++++.
T Consensus 109 ~~~~~~~~~~y~~~G~~~~~~ivllHG~~~~~~~w~~~~~~L~~~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~ 188 (383)
T PLN03084 109 QASSDLFRWFCVESGSNNNPPVLLIHGFPSQAYSYRKVLPVLSKNYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLE 188 (383)
T ss_pred EEcCCceEEEEEecCCCCCCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHH
Confidence 4478899999998884 6899999999999999999999999889999999999999987643 579999999999
Q ss_pred HHHHHhcCCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCC
Q 024392 156 DFLKEIVKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAG 199 (268)
Q Consensus 156 ~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 199 (268)
+++++++.++++++|||+||.+++.++.++|++|+++|+++++.
T Consensus 189 ~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~ 232 (383)
T PLN03084 189 SLIDELKSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPL 232 (383)
T ss_pred HHHHHhCCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCC
Confidence 99999999999999999999999999999999999999999874
No 20
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.83 E-value=1e-19 Score=151.14 Aligned_cols=101 Identities=33% Similarity=0.436 Sum_probs=86.4
Q ss_pred CC-CcEEEECCCCCChhhHHHhHHHHHhcCeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHHhcCCCeEEEEeChHH
Q 024392 97 EG-SPVVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVKEPAVLVGNSLGG 175 (268)
Q Consensus 97 ~~-~~vv~lHG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~lvG~S~Gg 175 (268)
++ |+|||+||++++...|..+++.|.++|+|+++|+||+|.|... ..++.+++++++.+.+ .++++++||||||
T Consensus 2 ~g~~~iv~~HG~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~-~~~~~~~~~~~~~~~~----~~~~~lvG~S~Gg 76 (245)
T TIGR01738 2 QGNVHLVLIHGWGMNAEVFRCLDEELSAHFTLHLVDLPGHGRSRGF-GPLSLADAAEAIAAQA----PDPAIWLGWSLGG 76 (245)
T ss_pred CCCceEEEEcCCCCchhhHHHHHHhhccCeEEEEecCCcCccCCCC-CCcCHHHHHHHHHHhC----CCCeEEEEEcHHH
Confidence 45 7899999999999999999999988899999999999998754 3456766666655433 3799999999999
Q ss_pred HHHHHHHHhCCCccCeEEEecCCCCCC
Q 024392 176 FAALVAAVGLPDQVTGVALLNSAGQFG 202 (268)
Q Consensus 176 ~~a~~~a~~~p~~v~~lvl~~~~~~~~ 202 (268)
.+++.++.++|++++++|++++.+.+.
T Consensus 77 ~~a~~~a~~~p~~v~~~il~~~~~~~~ 103 (245)
T TIGR01738 77 LVALHIAATHPDRVRALVTVASSPCFS 103 (245)
T ss_pred HHHHHHHHHCHHhhheeeEecCCcccc
Confidence 999999999999999999999876543
No 21
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.83 E-value=3.7e-19 Score=156.58 Aligned_cols=125 Identities=21% Similarity=0.320 Sum_probs=100.8
Q ss_pred CCCceEEeeCCeEEEEEEcc------CCCcEEEECCCCCChh-hHHHhHHHHHhc-CeEEEEcCCCCCCCCccc-ccCCH
Q 024392 77 PEGYNFWTWRGHKIHYVVQG------EGSPVVLIHGFGASAF-HWRYNIPELAKR-YKVYAVDLLGFGWSEKAI-IEYDA 147 (268)
Q Consensus 77 ~~~~~~~~~~g~~~~~~~~g------~~~~vv~lHG~~~~~~-~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~-~~~~~ 147 (268)
.+...+...||..++|..++ ..++|||+||++.+.. .|..+...|+++ |+|+++|+||||.|++.. ...+.
T Consensus 32 ~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~ 111 (330)
T PLN02298 32 GSKSFFTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRAYVPNV 111 (330)
T ss_pred cccceEEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCccccCCCH
Confidence 34456677899999987653 1345999999987653 456667788876 999999999999997542 23578
Q ss_pred HHHHHHHHHHHHHhcC------CCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCCCC
Q 024392 148 MVWKDQIVDFLKEIVK------EPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQF 201 (268)
Q Consensus 148 ~~~~~~~~~~l~~~~~------~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 201 (268)
+.+++|+.++++.+.. .+++|+||||||.+++.++.++|++|+++|++++....
T Consensus 112 ~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~ 171 (330)
T PLN02298 112 DLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKI 171 (330)
T ss_pred HHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccC
Confidence 8889999999988743 37999999999999999999999999999999987644
No 22
>PHA02857 monoglyceride lipase; Provisional
Probab=99.83 E-value=4.3e-19 Score=152.03 Aligned_cols=119 Identities=20% Similarity=0.271 Sum_probs=97.5
Q ss_pred EEeeCCeEEEEEEccC----CCcEEEECCCCCChhhHHHhHHHHHhc-CeEEEEcCCCCCCCCcccc-cCCHHHHHHHHH
Q 024392 82 FWTWRGHKIHYVVQGE----GSPVVLIHGFGASAFHWRYNIPELAKR-YKVYAVDLLGFGWSEKAII-EYDAMVWKDQIV 155 (268)
Q Consensus 82 ~~~~~g~~~~~~~~g~----~~~vv~lHG~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~~~ 155 (268)
++..||.+++|..+.+ .+.|+++||++++...|..+++.|++. |+|+++|+||||.|++... ..+..++.+|+.
T Consensus 5 ~~~~~g~~l~~~~~~~~~~~~~~v~llHG~~~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~~~d~~ 84 (276)
T PHA02857 5 MFNLDNDYIYCKYWKPITYPKALVFISHGAGEHSGRYEELAENISSLGILVFSHDHIGHGRSNGEKMMIDDFGVYVRDVV 84 (276)
T ss_pred eecCCCCEEEEEeccCCCCCCEEEEEeCCCccccchHHHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCHHHHHHHHH
Confidence 5567899999876432 345677799999999999999999887 9999999999999976432 236666777777
Q ss_pred HHHHHh----cCCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCCC
Q 024392 156 DFLKEI----VKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQ 200 (268)
Q Consensus 156 ~~l~~~----~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 200 (268)
+.++.+ ..++++++||||||.+++.++.++|++++++|+++|...
T Consensus 85 ~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~ 133 (276)
T PHA02857 85 QHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVN 133 (276)
T ss_pred HHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccc
Confidence 777654 345899999999999999999999999999999998654
No 23
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.83 E-value=1e-19 Score=153.71 Aligned_cols=102 Identities=24% Similarity=0.357 Sum_probs=94.9
Q ss_pred CCCcEEEECCCCCChhhHHHhHHHHHhcCeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHHhcCCCeEEEEeChHHH
Q 024392 97 EGSPVVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVKEPAVLVGNSLGGF 176 (268)
Q Consensus 97 ~~~~vv~lHG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~lvG~S~Gg~ 176 (268)
++|+||++||++++...|..+...|+++|+|+.+|+||||.|... ..++.+++++|+.+++++++.++++++||||||.
T Consensus 15 ~~~~iv~lhG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~s~~~-~~~~~~~~~~d~~~~l~~l~~~~~~lvGhS~Gg~ 93 (255)
T PRK10673 15 NNSPIVLVHGLFGSLDNLGVLARDLVNDHDIIQVDMRNHGLSPRD-PVMNYPAMAQDLLDTLDALQIEKATFIGHSMGGK 93 (255)
T ss_pred CCCCEEEECCCCCchhHHHHHHHHHhhCCeEEEECCCCCCCCCCC-CCCCHHHHHHHHHHHHHHcCCCceEEEEECHHHH
Confidence 568999999999999999999999998899999999999999864 4578999999999999999999999999999999
Q ss_pred HHHHHHHhCCCccCeEEEecCCC
Q 024392 177 AALVAAVGLPDQVTGVALLNSAG 199 (268)
Q Consensus 177 ~a~~~a~~~p~~v~~lvl~~~~~ 199 (268)
+++.++.++|++|+++|++++.+
T Consensus 94 va~~~a~~~~~~v~~lvli~~~~ 116 (255)
T PRK10673 94 AVMALTALAPDRIDKLVAIDIAP 116 (255)
T ss_pred HHHHHHHhCHhhcceEEEEecCC
Confidence 99999999999999999998654
No 24
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.82 E-value=7.6e-19 Score=156.56 Aligned_cols=119 Identities=38% Similarity=0.544 Sum_probs=107.3
Q ss_pred EEeeCCeEEEEEEccC--CCcEEEECCCCCChhhHHHhHHHHHhcCeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHH
Q 024392 82 FWTWRGHKIHYVVQGE--GSPVVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLK 159 (268)
Q Consensus 82 ~~~~~g~~~~~~~~g~--~~~vv~lHG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~ 159 (268)
....++.+++|...|+ +++|||+||++++...|..+...|.+.|+|+++|+||||.|.......+..++++++.++++
T Consensus 113 ~~~~~~~~i~~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~ 192 (371)
T PRK14875 113 KARIGGRTVRYLRLGEGDGTPVVLIHGFGGDLNNWLFNHAALAAGRPVIALDLPGHGASSKAVGAGSLDELAAAVLAFLD 192 (371)
T ss_pred cceEcCcEEEEecccCCCCCeEEEECCCCCccchHHHHHHHHhcCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 3466788899988763 68999999999999999999999988899999999999999766567889999999999999
Q ss_pred HhcCCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCCC
Q 024392 160 EIVKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQ 200 (268)
Q Consensus 160 ~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 200 (268)
+++.++++++|||+||.+++.++.++|++++++|++++...
T Consensus 193 ~~~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~ 233 (371)
T PRK14875 193 ALGIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGL 233 (371)
T ss_pred hcCCccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCc
Confidence 99989999999999999999999999999999999988643
No 25
>PLN02965 Probable pheophorbidase
Probab=99.82 E-value=8.8e-20 Score=154.80 Aligned_cols=100 Identities=23% Similarity=0.337 Sum_probs=91.4
Q ss_pred cEEEECCCCCChhhHHHhHHHHHhc-CeEEEEcCCCCCCCCccc-ccCCHHHHHHHHHHHHHHhcC-CCeEEEEeChHHH
Q 024392 100 PVVLIHGFGASAFHWRYNIPELAKR-YKVYAVDLLGFGWSEKAI-IEYDAMVWKDQIVDFLKEIVK-EPAVLVGNSLGGF 176 (268)
Q Consensus 100 ~vv~lHG~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~-~~~~~~~~~~~~~~~l~~~~~-~~~~lvG~S~Gg~ 176 (268)
.|||+||++.+...|..+++.|.+. |+|+++|+||||.|+... ..++.+++++|+.++++.++. ++++++||||||.
T Consensus 5 ~vvllHG~~~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmGG~ 84 (255)
T PLN02965 5 HFVFVHGASHGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLPPDHKVILVGHSIGGG 84 (255)
T ss_pred EEEEECCCCCCcCcHHHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcCCCCCEEEEecCcchH
Confidence 5999999999999999999999655 999999999999997653 357899999999999999987 5999999999999
Q ss_pred HHHHHHHhCCCccCeEEEecCCC
Q 024392 177 AALVAAVGLPDQVTGVALLNSAG 199 (268)
Q Consensus 177 ~a~~~a~~~p~~v~~lvl~~~~~ 199 (268)
+++.++.++|++|+++|++++..
T Consensus 85 ia~~~a~~~p~~v~~lvl~~~~~ 107 (255)
T PLN02965 85 SVTEALCKFTDKISMAIYVAAAM 107 (255)
T ss_pred HHHHHHHhCchheeEEEEEcccc
Confidence 99999999999999999999863
No 26
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.82 E-value=4.1e-19 Score=161.96 Aligned_cols=119 Identities=30% Similarity=0.433 Sum_probs=102.5
Q ss_pred EEeeCCeEEEEEEccC-----CCcEEEECCCCCChhhHHH-hHHHHH----hcCeEEEEcCCCCCCCCccc-ccCCHHHH
Q 024392 82 FWTWRGHKIHYVVQGE-----GSPVVLIHGFGASAFHWRY-NIPELA----KRYKVYAVDLLGFGWSEKAI-IEYDAMVW 150 (268)
Q Consensus 82 ~~~~~g~~~~~~~~g~-----~~~vv~lHG~~~~~~~~~~-~~~~l~----~~~~v~~~d~~G~G~s~~~~-~~~~~~~~ 150 (268)
+.+.+|..++|...++ +++|||+||++++...|.. +++.|. ++|+|+++|+||||.|+.+. ..++.+++
T Consensus 180 ~~~~~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~ytl~~~ 259 (481)
T PLN03087 180 WLSSSNESLFVHVQQPKDNKAKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYTLREH 259 (481)
T ss_pred eEeeCCeEEEEEEecCCCCCCCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCCHHHH
Confidence 4567788999998763 3699999999999999985 446665 35999999999999998653 45789999
Q ss_pred HHHHH-HHHHHhcCCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCCC
Q 024392 151 KDQIV-DFLKEIVKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQ 200 (268)
Q Consensus 151 ~~~~~-~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 200 (268)
++++. .++++++.++++++||||||.+++.++.++|++|+++|+++++..
T Consensus 260 a~~l~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~ 310 (481)
T PLN03087 260 LEMIERSVLERYKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYY 310 (481)
T ss_pred HHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCcc
Confidence 99995 889999999999999999999999999999999999999998654
No 27
>PRK07581 hypothetical protein; Validated
Probab=99.81 E-value=3.9e-19 Score=157.03 Aligned_cols=117 Identities=19% Similarity=0.268 Sum_probs=89.8
Q ss_pred eeCCeEEEEEEccC----C-CcEEEECCCCCChhhHHHhH---HHHHh-cCeEEEEcCCCCCCCCcccc---cCCHH---
Q 024392 84 TWRGHKIHYVVQGE----G-SPVVLIHGFGASAFHWRYNI---PELAK-RYKVYAVDLLGFGWSEKAII---EYDAM--- 148 (268)
Q Consensus 84 ~~~g~~~~~~~~g~----~-~~vv~lHG~~~~~~~~~~~~---~~l~~-~~~v~~~d~~G~G~s~~~~~---~~~~~--- 148 (268)
+.+|.+++|...|+ + |+||++||++++...|..++ +.|.. +|+|+++|+||||.|+.+.. .++.+
T Consensus 22 ~~~~~~l~y~~~G~~~~~~~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 101 (339)
T PRK07581 22 TLPDARLAYKTYGTLNAAKDNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFP 101 (339)
T ss_pred CcCCceEEEEecCccCCCCCCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCC
Confidence 66889999998874 2 35666777776766666543 35654 59999999999999976432 23332
Q ss_pred --HHHHHHHH----HHHHhcCCCe-EEEEeChHHHHHHHHHHhCCCccCeEEEecCCCC
Q 024392 149 --VWKDQIVD----FLKEIVKEPA-VLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQ 200 (268)
Q Consensus 149 --~~~~~~~~----~l~~~~~~~~-~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 200 (268)
.+++|+.+ ++++++++++ +|+||||||++++.++.+||++|+++|++++...
T Consensus 102 ~~~~~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~ 160 (339)
T PRK07581 102 HVTIYDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAK 160 (339)
T ss_pred ceeHHHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCC
Confidence 24555554 6678999995 7999999999999999999999999999988654
No 28
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.81 E-value=2.3e-19 Score=153.92 Aligned_cols=116 Identities=22% Similarity=0.351 Sum_probs=102.0
Q ss_pred eeCCeEEEEEEc-cCCCcEEEECCCCCChhhHHHhHHHHHhc-CeEEEEcCCCCCCCCccc-ccCCHHHHHHHHHHHHHH
Q 024392 84 TWRGHKIHYVVQ-GEGSPVVLIHGFGASAFHWRYNIPELAKR-YKVYAVDLLGFGWSEKAI-IEYDAMVWKDQIVDFLKE 160 (268)
Q Consensus 84 ~~~g~~~~~~~~-g~~~~vv~lHG~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~-~~~~~~~~~~~~~~~l~~ 160 (268)
+-||.+++|... +++|+|||+||++.+...|..+...|.+. |+|+++|+||||.|.... ..++.+++++++.+++++
T Consensus 3 ~~~~~~~~~~~~~~~~p~vvliHG~~~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~~ 82 (273)
T PLN02211 3 EENGEEVTDMKPNRQPPHFVLIHGISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFLSS 82 (273)
T ss_pred cccccccccccccCCCCeEEEECCCCCCcCcHHHHHHHHHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHHHh
Confidence 457888888876 56789999999999999999999999875 999999999999875443 237899999999999998
Q ss_pred hc-CCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCC
Q 024392 161 IV-KEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAG 199 (268)
Q Consensus 161 ~~-~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 199 (268)
++ .++++++||||||.++..++.++|++|+++|++++..
T Consensus 83 l~~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~ 122 (273)
T PLN02211 83 LPENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATM 122 (273)
T ss_pred cCCCCCEEEEEECchHHHHHHHHHhChhheeEEEEecccc
Confidence 85 5799999999999999999999999999999998753
No 29
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.81 E-value=2.7e-18 Score=146.20 Aligned_cols=118 Identities=19% Similarity=0.230 Sum_probs=98.9
Q ss_pred EEeeCCeEEEEEEcc---CCCcEEEECCCCCChh-hHHHhHHHHHh-cCeEEEEcCCCCCCCCcccc---cCCHHHHHHH
Q 024392 82 FWTWRGHKIHYVVQG---EGSPVVLIHGFGASAF-HWRYNIPELAK-RYKVYAVDLLGFGWSEKAII---EYDAMVWKDQ 153 (268)
Q Consensus 82 ~~~~~g~~~~~~~~g---~~~~vv~lHG~~~~~~-~~~~~~~~l~~-~~~v~~~d~~G~G~s~~~~~---~~~~~~~~~~ 153 (268)
+++.++..+.|...+ .+++||++||++++.. .|..+...+.+ +|+|+.+|+||+|.|..+.. .++.+++++|
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~ 85 (288)
T TIGR01250 6 IITVDGGYHLFTKTGGEGEKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDE 85 (288)
T ss_pred eecCCCCeEEEEeccCCCCCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHH
Confidence 457778888887765 3579999999866654 45556666676 39999999999999986532 2688999999
Q ss_pred HHHHHHHhcCCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCC
Q 024392 154 IVDFLKEIVKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAG 199 (268)
Q Consensus 154 ~~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 199 (268)
+.+++++++.++++++||||||.+++.++..+|++++++|++++..
T Consensus 86 ~~~~~~~~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 131 (288)
T TIGR01250 86 LEEVREKLGLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLD 131 (288)
T ss_pred HHHHHHHcCCCcEEEEEeehHHHHHHHHHHhCccccceeeEecccc
Confidence 9999999999999999999999999999999999999999998754
No 30
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.81 E-value=1.2e-19 Score=160.59 Aligned_cols=116 Identities=23% Similarity=0.346 Sum_probs=98.4
Q ss_pred EeeCCeEEEEEEccC-CCcEEEECCCCCChh------------hHHHhHH---HH-HhcCeEEEEcCCCCCCCCcccccC
Q 024392 83 WTWRGHKIHYVVQGE-GSPVVLIHGFGASAF------------HWRYNIP---EL-AKRYKVYAVDLLGFGWSEKAIIEY 145 (268)
Q Consensus 83 ~~~~g~~~~~~~~g~-~~~vv~lHG~~~~~~------------~~~~~~~---~l-~~~~~v~~~d~~G~G~s~~~~~~~ 145 (268)
.+.+|.+++|...|+ ++++||+||+.++.. .|..++. .| +++|+|+++|+||||.|.. ..+
T Consensus 41 ~~~~~~~l~y~~~G~~~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~--~~~ 118 (343)
T PRK08775 41 AGLEDLRLRYELIGPAGAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLD--VPI 118 (343)
T ss_pred CCCCCceEEEEEeccCCCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCC--CCC
Confidence 355889999999984 667888887777665 5787875 56 4569999999999998853 356
Q ss_pred CHHHHHHHHHHHHHHhcCCCe-EEEEeChHHHHHHHHHHhCCCccCeEEEecCCCC
Q 024392 146 DAMVWKDQIVDFLKEIVKEPA-VLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQ 200 (268)
Q Consensus 146 ~~~~~~~~~~~~l~~~~~~~~-~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 200 (268)
+..++++|+.+++++++.++. +++||||||++++.++.++|++|+++|++++...
T Consensus 119 ~~~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~ 174 (343)
T PRK08775 119 DTADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHR 174 (343)
T ss_pred CHHHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECcccc
Confidence 788999999999999999775 7999999999999999999999999999998754
No 31
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.79 E-value=1.5e-18 Score=144.19 Aligned_cols=105 Identities=30% Similarity=0.472 Sum_probs=92.8
Q ss_pred CCcEEEECCCCCChhhHHHhHHHHHhcCeEEEEcCCCCCCCCccc--ccCCHHHHHHH-HHHHHHHhcCCCeEEEEeChH
Q 024392 98 GSPVVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGWSEKAI--IEYDAMVWKDQ-IVDFLKEIVKEPAVLVGNSLG 174 (268)
Q Consensus 98 ~~~vv~lHG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~--~~~~~~~~~~~-~~~~l~~~~~~~~~lvG~S~G 174 (268)
+|+||++||++++...|..+.+.|+++|+|+++|+||+|.|+.+. ...+.++.+++ +..+++.++.++++++|||+|
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~~~L~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~G 80 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALIELLGPHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQLGIEPFFLVGYSMG 80 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHHHHhcccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHcCCCeEEEEEeccH
Confidence 478999999999999999999999966999999999999997643 35678888888 777888888889999999999
Q ss_pred HHHHHHHHHhCCCccCeEEEecCCCCCC
Q 024392 175 GFAALVAAVGLPDQVTGVALLNSAGQFG 202 (268)
Q Consensus 175 g~~a~~~a~~~p~~v~~lvl~~~~~~~~ 202 (268)
|.+++.++.++|+++++++++++.+...
T Consensus 81 g~ia~~~a~~~~~~v~~lil~~~~~~~~ 108 (251)
T TIGR03695 81 GRIALYYALQYPERVQGLILESGSPGLA 108 (251)
T ss_pred HHHHHHHHHhCchheeeeEEecCCCCcC
Confidence 9999999999999999999999875443
No 32
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.79 E-value=3.8e-18 Score=136.67 Aligned_cols=167 Identities=19% Similarity=0.212 Sum_probs=125.6
Q ss_pred CCcEEEECCCCCChhhHHHhHHHHHhc-CeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHHh---cCCCeEEEEeCh
Q 024392 98 GSPVVLIHGFGASAFHWRYNIPELAKR-YKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEI---VKEPAVLVGNSL 173 (268)
Q Consensus 98 ~~~vv~lHG~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~lvG~S~ 173 (268)
+..||++||+.|+....+.+.+.|.++ |.|+++.+||||.....-...++++|-+|+.+..+++ +.+.|.++|.||
T Consensus 15 ~~AVLllHGFTGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~gy~eI~v~GlSm 94 (243)
T COG1647 15 NRAVLLLHGFTGTPRDVRMLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEAGYDEIAVVGLSM 94 (243)
T ss_pred CEEEEEEeccCCCcHHHHHHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHcCCCeEEEEeecc
Confidence 478999999999999999999999999 9999999999998876556778888888888777665 578999999999
Q ss_pred HHHHHHHHHHhCCCccCeEEEecCCCCCCCCCCCCCchh--hhHHHHHhhccHHHHHHHHHHHHHhhhhcChhHHHHHHH
Q 024392 174 GGFAALVAAVGLPDQVTGVALLNSAGQFGDGRKGSNQSE--ESTLQKVFLKPLKEIFQRIVLGFLFWQAKQPARIVSVLK 251 (268)
Q Consensus 174 Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (268)
||.+++.+|.++| ++++|.++++...........+.. .+++.+ +...-.+...+....+..-..........+++
T Consensus 95 GGv~alkla~~~p--~K~iv~m~a~~~~k~~~~iie~~l~y~~~~kk-~e~k~~e~~~~e~~~~~~~~~~~~~~~~~~i~ 171 (243)
T COG1647 95 GGVFALKLAYHYP--PKKIVPMCAPVNVKSWRIIIEGLLEYFRNAKK-YEGKDQEQIDKEMKSYKDTPMTTTAQLKKLIK 171 (243)
T ss_pred hhHHHHHHHhhCC--ccceeeecCCcccccchhhhHHHHHHHHHhhh-ccCCCHHHHHHHHHHhhcchHHHHHHHHHHHH
Confidence 9999999999999 899999999876544433332211 122322 22333344444444443222334556667777
Q ss_pred HHHHhhcccCCCCccc
Q 024392 252 SVSHLLSYFTKPSAFE 267 (268)
Q Consensus 252 ~~~~~L~~i~~P~Lv~ 267 (268)
.+...+.+|..|++|.
T Consensus 172 ~~~~~~~~I~~pt~vv 187 (243)
T COG1647 172 DARRSLDKIYSPTLVV 187 (243)
T ss_pred HHHhhhhhcccchhhe
Confidence 7778999999999984
No 33
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.78 E-value=2.8e-18 Score=149.53 Aligned_cols=119 Identities=24% Similarity=0.219 Sum_probs=98.2
Q ss_pred eEEeeCCeEEEEEEccC--CCcEEEECCCCCChhhHHHhHHHHHh-cCeEEEEcCCCCCCCCccc--ccCCHHHHHHHHH
Q 024392 81 NFWTWRGHKIHYVVQGE--GSPVVLIHGFGASAFHWRYNIPELAK-RYKVYAVDLLGFGWSEKAI--IEYDAMVWKDQIV 155 (268)
Q Consensus 81 ~~~~~~g~~~~~~~~g~--~~~vv~lHG~~~~~~~~~~~~~~l~~-~~~v~~~d~~G~G~s~~~~--~~~~~~~~~~~~~ 155 (268)
.+...+|.+++|...|+ +++||++||++++...+ .+...+.. .|+|+++|+||||.|+... ..++.+++++|+.
T Consensus 8 ~~~~~~~~~l~y~~~g~~~~~~lvllHG~~~~~~~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~ 86 (306)
T TIGR01249 8 YLNVSDNHQLYYEQSGNPDGKPVVFLHGGPGSGTDP-GCRRFFDPETYRIVLFDQRGCGKSTPHACLEENTTWDLVADIE 86 (306)
T ss_pred eEEcCCCcEEEEEECcCCCCCEEEEECCCCCCCCCH-HHHhccCccCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHH
Confidence 34455689999999885 78899999988776543 33344443 4999999999999998653 2457788999999
Q ss_pred HHHHHhcCCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCCC
Q 024392 156 DFLKEIVKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQ 200 (268)
Q Consensus 156 ~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 200 (268)
.++++++.++++++||||||.+++.++.++|++++++|++++...
T Consensus 87 ~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~ 131 (306)
T TIGR01249 87 KLREKLGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLL 131 (306)
T ss_pred HHHHHcCCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccC
Confidence 999999999999999999999999999999999999999988643
No 34
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.78 E-value=3.2e-18 Score=146.00 Aligned_cols=106 Identities=35% Similarity=0.537 Sum_probs=95.6
Q ss_pred CCCcEEEECCCCCChhhHHHhHHHHHhcCeEEEEcCCCCCCCCccccc----CCHHHHHHHHHHHHHHhcCCCeEEEEeC
Q 024392 97 EGSPVVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGWSEKAIIE----YDAMVWKDQIVDFLKEIVKEPAVLVGNS 172 (268)
Q Consensus 97 ~~~~vv~lHG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~lvG~S 172 (268)
+++++|++||++.+...|..-++.|++.++|+++|++|+|+|+++... .....+++-++++....++++.+|+|||
T Consensus 89 ~~~plVliHGyGAg~g~f~~Nf~~La~~~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE~WR~~~~L~KmilvGHS 168 (365)
T KOG4409|consen 89 NKTPLVLIHGYGAGLGLFFRNFDDLAKIRNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIEQWRKKMGLEKMILVGHS 168 (365)
T ss_pred CCCcEEEEeccchhHHHHHHhhhhhhhcCceEEecccCCCCCCCCCCCCCcccchHHHHHHHHHHHHHcCCcceeEeecc
Confidence 567999999999999999999999999999999999999999987533 2345678888899999999999999999
Q ss_pred hHHHHHHHHHHhCCCccCeEEEecCCCCCC
Q 024392 173 LGGFAALVAAVGLPDQVTGVALLNSAGQFG 202 (268)
Q Consensus 173 ~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~ 202 (268)
+||+++..||.+||++|+.|||++|.+...
T Consensus 169 fGGYLaa~YAlKyPerV~kLiLvsP~Gf~~ 198 (365)
T KOG4409|consen 169 FGGYLAAKYALKYPERVEKLILVSPWGFPE 198 (365)
T ss_pred chHHHHHHHHHhChHhhceEEEeccccccc
Confidence 999999999999999999999999987554
No 35
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.78 E-value=1.7e-18 Score=153.71 Aligned_cols=118 Identities=23% Similarity=0.377 Sum_probs=98.7
Q ss_pred eeCCeEEEEEEccC-----CCcEEEECCCCCChh-----------hHHHhH---HHH-HhcCeEEEEcCCC--CCCCCcc
Q 024392 84 TWRGHKIHYVVQGE-----GSPVVLIHGFGASAF-----------HWRYNI---PEL-AKRYKVYAVDLLG--FGWSEKA 141 (268)
Q Consensus 84 ~~~g~~~~~~~~g~-----~~~vv~lHG~~~~~~-----------~~~~~~---~~l-~~~~~v~~~d~~G--~G~s~~~ 141 (268)
+.+|.+++|..+|. +++||++||++++.. .|..++ ..| .++|+|+++|+|| ||.|...
T Consensus 12 ~~~~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~ 91 (351)
T TIGR01392 12 VLSDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPS 91 (351)
T ss_pred ccCCceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCC
Confidence 67889999999873 578999999999774 367665 234 5559999999999 5665431
Q ss_pred ------------cccCCHHHHHHHHHHHHHHhcCCC-eEEEEeChHHHHHHHHHHhCCCccCeEEEecCCCCC
Q 024392 142 ------------IIEYDAMVWKDQIVDFLKEIVKEP-AVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQF 201 (268)
Q Consensus 142 ------------~~~~~~~~~~~~~~~~l~~~~~~~-~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 201 (268)
...++.+++++|+.+++++++.++ ++++||||||++++.++.++|++|+++|++++....
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 164 (351)
T TIGR01392 92 SINPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARH 164 (351)
T ss_pred CCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcC
Confidence 114788999999999999999998 999999999999999999999999999999997653
No 36
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.78 E-value=1e-17 Score=172.61 Aligned_cols=112 Identities=23% Similarity=0.384 Sum_probs=98.4
Q ss_pred EEEEEccC---CCcEEEECCCCCChhhHHHhHHHHHhcCeEEEEcCCCCCCCCccc--------ccCCHHHHHHHHHHHH
Q 024392 90 IHYVVQGE---GSPVVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGWSEKAI--------IEYDAMVWKDQIVDFL 158 (268)
Q Consensus 90 ~~~~~~g~---~~~vv~lHG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~--------~~~~~~~~~~~~~~~l 158 (268)
++|...|+ +++|||+||++++...|.++++.|.++|+|+++|+||||.|+... ..++.+++++++.+++
T Consensus 1360 i~~~~~G~~~~~~~vVllHG~~~s~~~w~~~~~~L~~~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll 1439 (1655)
T PLN02980 1360 IKVHEVGQNAEGSVVLFLHGFLGTGEDWIPIMKAISGSARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLI 1439 (1655)
T ss_pred EEEEecCCCCCCCeEEEECCCCCCHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHH
Confidence 34555553 579999999999999999999999888999999999999997532 2467899999999999
Q ss_pred HHhcCCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCCCC
Q 024392 159 KEIVKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQF 201 (268)
Q Consensus 159 ~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 201 (268)
++++.++++++||||||.+++.++.++|++|+++|++++.+..
T Consensus 1440 ~~l~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~ 1482 (1655)
T PLN02980 1440 EHITPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGL 1482 (1655)
T ss_pred HHhCCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCcc
Confidence 9999999999999999999999999999999999999886543
No 37
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.76 E-value=6e-18 Score=151.70 Aligned_cols=118 Identities=23% Similarity=0.352 Sum_probs=97.8
Q ss_pred eeCCeEEEEEEccC-----CCcEEEECCCCCChhh-------------HHHhH----HHHHhcCeEEEEcCCCC-CCCCc
Q 024392 84 TWRGHKIHYVVQGE-----GSPVVLIHGFGASAFH-------------WRYNI----PELAKRYKVYAVDLLGF-GWSEK 140 (268)
Q Consensus 84 ~~~g~~~~~~~~g~-----~~~vv~lHG~~~~~~~-------------~~~~~----~~l~~~~~v~~~d~~G~-G~s~~ 140 (268)
+.+|.+++|...|+ +|+||++||++++... |..++ ..+.++|+|+++|++|+ |.|..
T Consensus 29 ~~~~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~ 108 (379)
T PRK00175 29 VLPPVELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTG 108 (379)
T ss_pred CcCCceEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCC
Confidence 56788999999874 5789999999999975 55554 23356699999999983 44432
Q ss_pred cc--------------ccCCHHHHHHHHHHHHHHhcCCC-eEEEEeChHHHHHHHHHHhCCCccCeEEEecCCCCC
Q 024392 141 AI--------------IEYDAMVWKDQIVDFLKEIVKEP-AVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQF 201 (268)
Q Consensus 141 ~~--------------~~~~~~~~~~~~~~~l~~~~~~~-~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 201 (268)
+. ..++.+++++++.+++++++.++ ++++||||||.+++.++.++|++|+++|++++.+..
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 184 (379)
T PRK00175 109 PSSINPDTGKPYGSDFPVITIRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARL 184 (379)
T ss_pred CCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCccc
Confidence 11 15789999999999999999999 489999999999999999999999999999987643
No 38
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.75 E-value=2.2e-17 Score=149.00 Aligned_cols=106 Identities=29% Similarity=0.485 Sum_probs=90.2
Q ss_pred CCCcEEEECCCCCChhhHHHhHHHHHhcCeEEEEcCCCCCCCCcccccC-CH----HHHHHHHHHHHHHhcCCCeEEEEe
Q 024392 97 EGSPVVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGWSEKAIIEY-DA----MVWKDQIVDFLKEIVKEPAVLVGN 171 (268)
Q Consensus 97 ~~~~vv~lHG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~-~~----~~~~~~~~~~l~~~~~~~~~lvG~ 171 (268)
++|+|||+||++++...|...+..|+++|+|+++|+||||.|+.+...+ +. +.+++++.++++.++.++++++||
T Consensus 104 ~~p~vvllHG~~~~~~~~~~~~~~L~~~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~lvGh 183 (402)
T PLN02894 104 DAPTLVMVHGYGASQGFFFRNFDALASRFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAKNLSNFILLGH 183 (402)
T ss_pred CCCEEEEECCCCcchhHHHHHHHHHHhCCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHcCCCCeEEEEE
Confidence 5689999999999999998888999888999999999999997654222 11 234667778888888899999999
Q ss_pred ChHHHHHHHHHHhCCCccCeEEEecCCCCCC
Q 024392 172 SLGGFAALVAAVGLPDQVTGVALLNSAGQFG 202 (268)
Q Consensus 172 S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~ 202 (268)
||||.+++.++.++|++|+++|++++.+...
T Consensus 184 S~GG~la~~~a~~~p~~v~~lvl~~p~~~~~ 214 (402)
T PLN02894 184 SFGGYVAAKYALKHPEHVQHLILVGPAGFSS 214 (402)
T ss_pred CHHHHHHHHHHHhCchhhcEEEEECCccccC
Confidence 9999999999999999999999999876443
No 39
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.75 E-value=4.1e-17 Score=141.27 Aligned_cols=126 Identities=29% Similarity=0.424 Sum_probs=107.7
Q ss_pred CCCceEEeeCCeEEEEEEccC---C-CcEEEECCCCCChhhHHHhHHHHHhc-CeEEEEcCCCCCCCC-c-ccccCCHHH
Q 024392 77 PEGYNFWTWRGHKIHYVVQGE---G-SPVVLIHGFGASAFHWRYNIPELAKR-YKVYAVDLLGFGWSE-K-AIIEYDAMV 149 (268)
Q Consensus 77 ~~~~~~~~~~g~~~~~~~~g~---~-~~vv~lHG~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~-~-~~~~~~~~~ 149 (268)
.....+...+|..+.|..+.. . .+||++||.+++...|..++..|..+ |.|+++|+||||.|. + .....++.+
T Consensus 9 ~~~~~~~~~d~~~~~~~~~~~~~~~~g~Vvl~HG~~Eh~~ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~~f~~ 88 (298)
T COG2267 9 RTEGYFTGADGTRLRYRTWAAPEPPKGVVVLVHGLGEHSGRYEELADDLAARGFDVYALDLRGHGRSPRGQRGHVDSFAD 88 (298)
T ss_pred cccceeecCCCceEEEEeecCCCCCCcEEEEecCchHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCchhHHH
Confidence 345567788999999987642 2 57999999999999999999999988 999999999999997 3 333345888
Q ss_pred HHHHHHHHHHHhc----CCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCCCCC
Q 024392 150 WKDQIVDFLKEIV----KEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQFG 202 (268)
Q Consensus 150 ~~~~~~~~l~~~~----~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~ 202 (268)
+.+|+.++++... ..+++++||||||.+++.++.+++.+++++|+.+|.....
T Consensus 89 ~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~ 145 (298)
T COG2267 89 YVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLG 145 (298)
T ss_pred HHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCC
Confidence 8999999998774 3599999999999999999999999999999999987654
No 40
>PLN02511 hydrolase
Probab=99.74 E-value=1.8e-17 Score=148.86 Aligned_cols=119 Identities=13% Similarity=0.160 Sum_probs=88.1
Q ss_pred EEeeCCeEEEE--EE------ccCCCcEEEECCCCCChh-hH-HHhHHHHHhc-CeEEEEcCCCCCCCCcccccCCHHHH
Q 024392 82 FWTWRGHKIHY--VV------QGEGSPVVLIHGFGASAF-HW-RYNIPELAKR-YKVYAVDLLGFGWSEKAIIEYDAMVW 150 (268)
Q Consensus 82 ~~~~~g~~~~~--~~------~g~~~~vv~lHG~~~~~~-~~-~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~ 150 (268)
+.+.||..+.+ .. ..++|+||++||++++.. .| ..++..+.++ |+|+++|+||||.|...........+
T Consensus 76 l~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~~~~~~~~ 155 (388)
T PLN02511 76 LRTPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTTPQFYSASF 155 (388)
T ss_pred EECCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCCcCEEcCCc
Confidence 44556766653 21 124678999999987764 34 4555555444 99999999999999764333333455
Q ss_pred HHHHHHHHHHhcC----CCeEEEEeChHHHHHHHHHHhCCCc--cCeEEEecCCCC
Q 024392 151 KDQIVDFLKEIVK----EPAVLVGNSLGGFAALVAAVGLPDQ--VTGVALLNSAGQ 200 (268)
Q Consensus 151 ~~~~~~~l~~~~~----~~~~lvG~S~Gg~~a~~~a~~~p~~--v~~lvl~~~~~~ 200 (268)
.+|+.++++++.. .+++++||||||.+++.++.+++++ |.++++++++.+
T Consensus 156 ~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~ 211 (388)
T PLN02511 156 TGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFD 211 (388)
T ss_pred hHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcC
Confidence 7788888877754 5899999999999999999999987 889888877654
No 41
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.73 E-value=9.8e-17 Score=136.28 Aligned_cols=102 Identities=23% Similarity=0.260 Sum_probs=85.7
Q ss_pred CCcEEEECCCCCCh----hhHHHhHHHHHhc-CeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHH---hcCCCeEEE
Q 024392 98 GSPVVLIHGFGASA----FHWRYNIPELAKR-YKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKE---IVKEPAVLV 169 (268)
Q Consensus 98 ~~~vv~lHG~~~~~----~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~lv 169 (268)
.++|||+||++++. ..|..+++.|+++ |+|+.+|+||||.|.+.....++..+.+|+.++++. .+.++++++
T Consensus 25 ~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~~~~~~~~~Dv~~ai~~L~~~~~~~v~Lv 104 (266)
T TIGR03101 25 RGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAAARWDVWKEDVAAAYRWLIEQGHPPVTLW 104 (266)
T ss_pred ceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccccCCHHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 35799999998642 4567778889877 999999999999998765566788888887775544 466799999
Q ss_pred EeChHHHHHHHHHHhCCCccCeEEEecCCC
Q 024392 170 GNSLGGFAALVAAVGLPDQVTGVALLNSAG 199 (268)
Q Consensus 170 G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 199 (268)
||||||.+++.++.++|++++++|+++|..
T Consensus 105 G~SmGG~vAl~~A~~~p~~v~~lVL~~P~~ 134 (266)
T TIGR03101 105 GLRLGALLALDAANPLAAKCNRLVLWQPVV 134 (266)
T ss_pred EECHHHHHHHHHHHhCccccceEEEecccc
Confidence 999999999999999999999999999864
No 42
>PRK10985 putative hydrolase; Provisional
Probab=99.70 E-value=2.5e-16 Score=138.37 Aligned_cols=119 Identities=18% Similarity=0.170 Sum_probs=81.2
Q ss_pred EEeeCCeEEE--EEEc----cCCCcEEEECCCCCChh--hHHHhHHHHHhc-CeEEEEcCCCCCCCCccc-ccCCHHHHH
Q 024392 82 FWTWRGHKIH--YVVQ----GEGSPVVLIHGFGASAF--HWRYNIPELAKR-YKVYAVDLLGFGWSEKAI-IEYDAMVWK 151 (268)
Q Consensus 82 ~~~~~g~~~~--~~~~----g~~~~vv~lHG~~~~~~--~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~-~~~~~~~~~ 151 (268)
+...||..+. |... .++|+||++||++++.. .+..+++.|.++ |+|+++|+||||.+.... ..+.. ...
T Consensus 36 ~~~~dg~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~~~-~~~ 114 (324)
T PRK10985 36 LELPDGDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHRIYHS-GET 114 (324)
T ss_pred EECCCCCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcceECC-Cch
Confidence 4455665543 3221 23578999999988754 345678888887 999999999999775431 11111 113
Q ss_pred HHHHHHH----HHhcCCCeEEEEeChHHHHHHHHHHhCCCc--cCeEEEecCCCCC
Q 024392 152 DQIVDFL----KEIVKEPAVLVGNSLGGFAALVAAVGLPDQ--VTGVALLNSAGQF 201 (268)
Q Consensus 152 ~~~~~~l----~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~--v~~lvl~~~~~~~ 201 (268)
+|+.+++ ++++.++++++||||||.++..++.++++. ++++|+++++...
T Consensus 115 ~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~ 170 (324)
T PRK10985 115 EDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLML 170 (324)
T ss_pred HHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCH
Confidence 4444333 334667899999999999988888876544 8999999987643
No 43
>PRK05855 short chain dehydrogenase; Validated
Probab=99.70 E-value=1.8e-16 Score=149.15 Aligned_cols=117 Identities=20% Similarity=0.323 Sum_probs=98.7
Q ss_pred eEEeeCCeEEEEEEccC--CCcEEEECCCCCChhhHHHhHHHHHhcCeEEEEcCCCCCCCCccc--ccCCHHHHHHHHHH
Q 024392 81 NFWTWRGHKIHYVVQGE--GSPVVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGWSEKAI--IEYDAMVWKDQIVD 156 (268)
Q Consensus 81 ~~~~~~g~~~~~~~~g~--~~~vv~lHG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~--~~~~~~~~~~~~~~ 156 (268)
.++..+|.+++|...|+ +|+|||+||++++...|.++.+.|.++|+|+++|+||||.|+... ..++.+++++|+.+
T Consensus 6 ~~~~~~g~~l~~~~~g~~~~~~ivllHG~~~~~~~w~~~~~~L~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~dl~~ 85 (582)
T PRK05855 6 TVVSSDGVRLAVYEWGDPDRPTVVLVHGYPDNHEVWDGVAPLLADRFRVVAYDVRGAGRSSAPKRTAAYTLARLADDFAA 85 (582)
T ss_pred EEEeeCCEEEEEEEcCCCCCCeEEEEcCCCchHHHHHHHHHHhhcceEEEEecCCCCCCCCCCCcccccCHHHHHHHHHH
Confidence 45678999999998873 689999999999999999999999777999999999999998643 46789999999999
Q ss_pred HHHHhcCCC-eEEEEeChHHHHHHHHHHhC--CCccCeEEEecC
Q 024392 157 FLKEIVKEP-AVLVGNSLGGFAALVAAVGL--PDQVTGVALLNS 197 (268)
Q Consensus 157 ~l~~~~~~~-~~lvG~S~Gg~~a~~~a~~~--p~~v~~lvl~~~ 197 (268)
++++++.++ ++++||||||.+++.++.+. ++++..++.+++
T Consensus 86 ~i~~l~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~ 129 (582)
T PRK05855 86 VIDAVSPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSG 129 (582)
T ss_pred HHHHhCCCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccC
Confidence 999998765 99999999999998887762 445555555444
No 44
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.68 E-value=1.4e-16 Score=125.87 Aligned_cols=122 Identities=23% Similarity=0.292 Sum_probs=102.8
Q ss_pred EeeCCeEEEEEEccCCC-cEEEECCCCCCh-hhHHHhHHHHHhc--CeEEEEcCCCCCCCCcccccCCHHH---HHHHHH
Q 024392 83 WTWRGHKIHYVVQGEGS-PVVLIHGFGASA-FHWRYNIPELAKR--YKVYAVDLLGFGWSEKAIIEYDAMV---WKDQIV 155 (268)
Q Consensus 83 ~~~~g~~~~~~~~g~~~-~vv~lHG~~~~~-~~~~~~~~~l~~~--~~v~~~d~~G~G~s~~~~~~~~~~~---~~~~~~ 155 (268)
+.++|..++|...|.|+ .|+++.|.-++. .+|.+++..+... +.++++|.||||.|..+...+..+- .+++..
T Consensus 26 v~vng~ql~y~~~G~G~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~~Da~~av 105 (277)
T KOG2984|consen 26 VHVNGTQLGYCKYGHGPNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFMKDAEYAV 105 (277)
T ss_pred eeecCceeeeeecCCCCceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHHHHhHHHHH
Confidence 47899999999999887 688899977766 4888888776554 8999999999999988765554443 456677
Q ss_pred HHHHHhcCCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCCCCCCC
Q 024392 156 DFLKEIVKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQFGDG 204 (268)
Q Consensus 156 ~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~ 204 (268)
++++.+..+++.++|||-||..++..|+++++.|.++|++++.......
T Consensus 106 dLM~aLk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~ 154 (277)
T KOG2984|consen 106 DLMEALKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHL 154 (277)
T ss_pred HHHHHhCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecch
Confidence 7888899999999999999999999999999999999999998765433
No 45
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.67 E-value=5.6e-15 Score=126.79 Aligned_cols=100 Identities=23% Similarity=0.158 Sum_probs=79.8
Q ss_pred CCCcEEEECCCCC----ChhhHHHhHHHHHhc-CeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHHh-----cCCCe
Q 024392 97 EGSPVVLIHGFGA----SAFHWRYNIPELAKR-YKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEI-----VKEPA 166 (268)
Q Consensus 97 ~~~~vv~lHG~~~----~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~-----~~~~~ 166 (268)
++++||++||+.+ +...|..+++.|+++ |.|+++|++|||.|.+.. .+..++.+|+.++++.+ +.+++
T Consensus 25 ~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~--~~~~~~~~d~~~~~~~l~~~~~g~~~i 102 (274)
T TIGR03100 25 HTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGEN--LGFEGIDADIAAAIDAFREAAPHLRRI 102 (274)
T ss_pred CCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC--CCHHHHHHHHHHHHHHHHhhCCCCCcE
Confidence 3567888887653 334566778889887 999999999999987542 46677788888888776 45789
Q ss_pred EEEEeChHHHHHHHHHHhCCCccCeEEEecCCC
Q 024392 167 VLVGNSLGGFAALVAAVGLPDQVTGVALLNSAG 199 (268)
Q Consensus 167 ~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 199 (268)
+++|||+||.+++.++.. +++|+++|++++..
T Consensus 103 ~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~ 134 (274)
T TIGR03100 103 VAWGLCDAASAALLYAPA-DLRVAGLVLLNPWV 134 (274)
T ss_pred EEEEECHHHHHHHHHhhh-CCCccEEEEECCcc
Confidence 999999999999999765 45899999999864
No 46
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.67 E-value=2.5e-15 Score=135.92 Aligned_cols=119 Identities=20% Similarity=0.216 Sum_probs=86.9
Q ss_pred eEEeeCCeEEEEEE--c---cCCCcEEEECCCCCCh-hhHHHhHHHHHhc-CeEEEEcCCCCCCCCcccccCCHHHHHHH
Q 024392 81 NFWTWRGHKIHYVV--Q---GEGSPVVLIHGFGASA-FHWRYNIPELAKR-YKVYAVDLLGFGWSEKAIIEYDAMVWKDQ 153 (268)
Q Consensus 81 ~~~~~~g~~~~~~~--~---g~~~~vv~lHG~~~~~-~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~ 153 (268)
.+...+|..+.... . ++.|.||+.||+.+.. +.|..+.+.|+++ |+|+++|+||+|.|.......+.....++
T Consensus 172 ~i~~~~g~~l~g~l~~P~~~~~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~~~d~~~~~~a 251 (414)
T PRK05077 172 EFPIPGGGPITGFLHLPKGDGPFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKLTQDSSLLHQA 251 (414)
T ss_pred EEEcCCCcEEEEEEEECCCCCCccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCccccHHHHHHH
Confidence 33344564665322 1 2345666666666654 5687888888887 99999999999999764333444444556
Q ss_pred HHHHHHHh---cCCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCC
Q 024392 154 IVDFLKEI---VKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAG 199 (268)
Q Consensus 154 ~~~~l~~~---~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 199 (268)
+.+.+... +.+++.++|||+||.+++.++..+|++++++|++++..
T Consensus 252 vld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~ 300 (414)
T PRK05077 252 VLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVV 300 (414)
T ss_pred HHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCcc
Confidence 66666554 56799999999999999999999999999999998875
No 47
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.67 E-value=1.7e-15 Score=127.13 Aligned_cols=126 Identities=28% Similarity=0.404 Sum_probs=102.3
Q ss_pred eEEeeCCeEEEEEEccC----CC--cEEEECCCCCCh-hhHHHhHHHHHhc-CeEEEEcCCCCCCCCccc-ccCCHHHHH
Q 024392 81 NFWTWRGHKIHYVVQGE----GS--PVVLIHGFGASA-FHWRYNIPELAKR-YKVYAVDLLGFGWSEKAI-IEYDAMVWK 151 (268)
Q Consensus 81 ~~~~~~g~~~~~~~~g~----~~--~vv~lHG~~~~~-~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~-~~~~~~~~~ 151 (268)
.+...+|..+.+..+-. .| .|+++||+++.. ..|...+..|+.. |.|+++|++|||.|++.. .-.+.+..+
T Consensus 31 ~~~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~yi~~~d~~v 110 (313)
T KOG1455|consen 31 FFTNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHAYVPSFDLVV 110 (313)
T ss_pred eEEcCCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcccCCcHHHHH
Confidence 34566788888765531 22 689999999887 5777888999888 999999999999999853 345788889
Q ss_pred HHHHHHHHHhc------CCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCCCCCCCCC
Q 024392 152 DQIVDFLKEIV------KEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQFGDGRK 206 (268)
Q Consensus 152 ~~~~~~l~~~~------~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 206 (268)
+|+.+..+... ..+.+|+||||||.+++.++.++|+..+|+|+++|-....+...
T Consensus 111 ~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~k 171 (313)
T KOG1455|consen 111 DDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTK 171 (313)
T ss_pred HHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccC
Confidence 99988887532 23899999999999999999999999999999999877665543
No 48
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.67 E-value=1.4e-15 Score=136.65 Aligned_cols=115 Identities=25% Similarity=0.341 Sum_probs=92.5
Q ss_pred eCCeEEEEEEcc-----CCCcEEEECCCCCChhhHHHhHHHHHhc-CeEEEEcCCCCCCCCccc-ccCCHHHHHHHHHHH
Q 024392 85 WRGHKIHYVVQG-----EGSPVVLIHGFGASAFHWRYNIPELAKR-YKVYAVDLLGFGWSEKAI-IEYDAMVWKDQIVDF 157 (268)
Q Consensus 85 ~~g~~~~~~~~g-----~~~~vv~lHG~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~-~~~~~~~~~~~~~~~ 157 (268)
.++..++|..+. ..++||++||++++...|..+++.|+++ |+|+++|++|||.|++.. ...+.+.+.+|+.++
T Consensus 118 ~~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~Dl~~~ 197 (395)
T PLN02652 118 ARRNALFCRSWAPAAGEMRGILIIIHGLNEHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHGYVPSLDYVVEDTEAF 197 (395)
T ss_pred CCCCEEEEEEecCCCCCCceEEEEECCchHHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCcCHHHHHHHHHHH
Confidence 345666666543 2358999999999988999999999876 999999999999998753 234777888999998
Q ss_pred HHHhcC----CCeEEEEeChHHHHHHHHHHhCC---CccCeEEEecCCCC
Q 024392 158 LKEIVK----EPAVLVGNSLGGFAALVAAVGLP---DQVTGVALLNSAGQ 200 (268)
Q Consensus 158 l~~~~~----~~~~lvG~S~Gg~~a~~~a~~~p---~~v~~lvl~~~~~~ 200 (268)
++.+.. .+++++||||||.+++.++. +| ++++++|+.+|...
T Consensus 198 l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~ 246 (395)
T PLN02652 198 LEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALR 246 (395)
T ss_pred HHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccc
Confidence 888752 37999999999999998764 55 47999999988754
No 49
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.63 E-value=1.3e-15 Score=133.32 Aligned_cols=104 Identities=42% Similarity=0.676 Sum_probs=91.8
Q ss_pred CCCcEEEECCCCCChhhHHHhHHHHHhc--CeEEEEcCCCCCCCC-ccc-ccCCHHHHHHHHHHHHHHhcCCCeEEEEeC
Q 024392 97 EGSPVVLIHGFGASAFHWRYNIPELAKR--YKVYAVDLLGFGWSE-KAI-IEYDAMVWKDQIVDFLKEIVKEPAVLVGNS 172 (268)
Q Consensus 97 ~~~~vv~lHG~~~~~~~~~~~~~~l~~~--~~v~~~d~~G~G~s~-~~~-~~~~~~~~~~~~~~~l~~~~~~~~~lvG~S 172 (268)
++++||++||++++...|+..+..|.+. +.|+++|++|+|.++ .+. ..|+..++++.+...+.+.+.++++++|||
T Consensus 57 ~~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~~~~~~~lvghS 136 (326)
T KOG1454|consen 57 DKPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEVFVEPVSLVGHS 136 (326)
T ss_pred CCCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhhcCcceEEEEeC
Confidence 5789999999999999999999999998 999999999999443 332 448999999999999999998899999999
Q ss_pred hHHHHHHHHHHhCCCccCeEE---EecCCCC
Q 024392 173 LGGFAALVAAVGLPDQVTGVA---LLNSAGQ 200 (268)
Q Consensus 173 ~Gg~~a~~~a~~~p~~v~~lv---l~~~~~~ 200 (268)
+||.+++.+|+.+|+.|+++| ++++...
T Consensus 137 ~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~ 167 (326)
T KOG1454|consen 137 LGGIVALKAAAYYPETVDSLVLLDLLGPPVY 167 (326)
T ss_pred cHHHHHHHHHHhCcccccceeeecccccccc
Confidence 999999999999999999999 5555443
No 50
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.60 E-value=2e-14 Score=129.22 Aligned_cols=105 Identities=21% Similarity=0.254 Sum_probs=83.3
Q ss_pred CCCcEEEECCCCCCh--hhHHH-hHHHHH--h-cCeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHHh------cCC
Q 024392 97 EGSPVVLIHGFGASA--FHWRY-NIPELA--K-RYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEI------VKE 164 (268)
Q Consensus 97 ~~~~vv~lHG~~~~~--~~~~~-~~~~l~--~-~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~------~~~ 164 (268)
++|++|++||+.++. +.|.. +.+.|. + +++|+++|++|+|.+..+.........++++.++++.+ +.+
T Consensus 40 ~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~gl~l~ 119 (442)
T TIGR03230 40 ETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFNYPWD 119 (442)
T ss_pred CCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhhCCCCC
Confidence 578999999998754 45765 455543 2 39999999999998876543334456667777777754 367
Q ss_pred CeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCCCC
Q 024392 165 PAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQF 201 (268)
Q Consensus 165 ~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 201 (268)
+++|+||||||++|..++..+|++|.++++++|++..
T Consensus 120 ~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP~ 156 (442)
T TIGR03230 120 NVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGPT 156 (442)
T ss_pred cEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCCc
Confidence 9999999999999999999999999999999998654
No 51
>PRK13604 luxD acyl transferase; Provisional
Probab=99.59 E-value=3.1e-14 Score=122.14 Aligned_cols=118 Identities=15% Similarity=0.131 Sum_probs=90.9
Q ss_pred eEEeeCCeEEEEEEcc-------CCCcEEEECCCCCChhhHHHhHHHHHhc-CeEEEEcCCCC-CCCCcccccCCHHHHH
Q 024392 81 NFWTWRGHKIHYVVQG-------EGSPVVLIHGFGASAFHWRYNIPELAKR-YKVYAVDLLGF-GWSEKAIIEYDAMVWK 151 (268)
Q Consensus 81 ~~~~~~g~~~~~~~~g-------~~~~vv~lHG~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~-G~s~~~~~~~~~~~~~ 151 (268)
.+...+|.++.-+... +.++||+.||++++...+..+++.|+++ |.|+.+|.+|+ |.|++.....+.....
T Consensus 13 ~~~~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~~t~s~g~ 92 (307)
T PRK13604 13 VICLENGQSIRVWETLPKENSPKKNNTILIASGFARRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDEFTMSIGK 92 (307)
T ss_pred eEEcCCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCccccCcccccH
Confidence 3446678888744322 2257999999999988889999999998 99999999987 9998765444444446
Q ss_pred HHHHHHHHHh---cCCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCCC
Q 024392 152 DQIVDFLKEI---VKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQ 200 (268)
Q Consensus 152 ~~~~~~l~~~---~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 200 (268)
+|+.++++++ +.+++.|+||||||.+++..|... .++++|+.+|..+
T Consensus 93 ~Dl~aaid~lk~~~~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~ 142 (307)
T PRK13604 93 NSLLTVVDWLNTRGINNLGLIAASLSARIAYEVINEI--DLSFLITAVGVVN 142 (307)
T ss_pred HHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHhcCC--CCCEEEEcCCccc
Confidence 7776666554 567999999999999997776644 3999999999865
No 52
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.57 E-value=2e-14 Score=126.62 Aligned_cols=117 Identities=23% Similarity=0.250 Sum_probs=91.2
Q ss_pred eeCCeEEEEEEcc---CCCcEEEECCCCCChh-hH-------------------------HHhHHHHHhc-CeEEEEcCC
Q 024392 84 TWRGHKIHYVVQG---EGSPVVLIHGFGASAF-HW-------------------------RYNIPELAKR-YKVYAVDLL 133 (268)
Q Consensus 84 ~~~g~~~~~~~~g---~~~~vv~lHG~~~~~~-~~-------------------------~~~~~~l~~~-~~v~~~d~~ 133 (268)
..||..+++..+. .+.+|+++||++++.. .+ ..+++.|.++ |.|+++|+|
T Consensus 4 ~~~g~~l~~~~~~~~~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D~r 83 (332)
T TIGR01607 4 NKDGLLLKTYSWIVKNAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLDLQ 83 (332)
T ss_pred CCCCCeEEEeeeeccCCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEeccc
Confidence 4578888877653 3348999999999885 21 3578889887 999999999
Q ss_pred CCCCCCcccc----cCCHHHHHHHHHHHHHHhc------------------------CCCeEEEEeChHHHHHHHHHHhC
Q 024392 134 GFGWSEKAII----EYDAMVWKDQIVDFLKEIV------------------------KEPAVLVGNSLGGFAALVAAVGL 185 (268)
Q Consensus 134 G~G~s~~~~~----~~~~~~~~~~~~~~l~~~~------------------------~~~~~lvG~S~Gg~~a~~~a~~~ 185 (268)
|||.|++... -.+++++++|+.++++... ..+++++||||||.+++.++.++
T Consensus 84 GHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~~ 163 (332)
T TIGR01607 84 GHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLELL 163 (332)
T ss_pred ccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHHh
Confidence 9999986421 1378888999998887642 24799999999999999998765
Q ss_pred CC--------ccCeEEEecCCCC
Q 024392 186 PD--------QVTGVALLNSAGQ 200 (268)
Q Consensus 186 p~--------~v~~lvl~~~~~~ 200 (268)
++ .++|+|+++|...
T Consensus 164 ~~~~~~~~~~~i~g~i~~s~~~~ 186 (332)
T TIGR01607 164 GKSNENNDKLNIKGCISLSGMIS 186 (332)
T ss_pred ccccccccccccceEEEeccceE
Confidence 42 5899999998753
No 53
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.56 E-value=2.8e-14 Score=122.41 Aligned_cols=116 Identities=22% Similarity=0.246 Sum_probs=84.3
Q ss_pred CeEEEEEEcc-CCCcEEEECCCCCCh-hhHHHh-HHH-HHhc-CeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHHh
Q 024392 87 GHKIHYVVQG-EGSPVVLIHGFGASA-FHWRYN-IPE-LAKR-YKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEI 161 (268)
Q Consensus 87 g~~~~~~~~g-~~~~vv~lHG~~~~~-~~~~~~-~~~-l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~ 161 (268)
+..+.+.... ++|++|++||+.++. ..|... .+. +.+. ++|+++|+++++.+.......+.....+++.++++.+
T Consensus 24 ~~~~~~~~f~~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~a~~~~~~v~~~la~~l~~L 103 (275)
T cd00707 24 PSSLKNSNFNPSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQAVNNTRVVGAELAKFLDFL 103 (275)
T ss_pred hhhhhhcCCCCCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHHHHHhHHHHHHHHHHHHHHH
Confidence 3344444333 578999999999988 577654 333 4444 9999999998854433323334455556666666554
Q ss_pred ------cCCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCCCCC
Q 024392 162 ------VKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQFG 202 (268)
Q Consensus 162 ------~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~ 202 (268)
+.++++++||||||+++..++.++|++|++++.++|+....
T Consensus 104 ~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p~f 150 (275)
T cd00707 104 VDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGPLF 150 (275)
T ss_pred HHhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCcccc
Confidence 34689999999999999999999999999999999987543
No 54
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.54 E-value=5.3e-14 Score=116.52 Aligned_cols=101 Identities=28% Similarity=0.467 Sum_probs=87.1
Q ss_pred CCCcEEEECCCCCChhhHHHhHHHHHhc--CeEEEEcCCCCCCCCcc-cccCCHHHHHHHHHHHHHHhc---CCCeEEEE
Q 024392 97 EGSPVVLIHGFGASAFHWRYNIPELAKR--YKVYAVDLLGFGWSEKA-IIEYDAMVWKDQIVDFLKEIV---KEPAVLVG 170 (268)
Q Consensus 97 ~~~~vv~lHG~~~~~~~~~~~~~~l~~~--~~v~~~d~~G~G~s~~~-~~~~~~~~~~~~~~~~l~~~~---~~~~~lvG 170 (268)
.+|.++++||.+.+.-.|..+...+... .+++++|+||||++.-. ..+.+.+.++.|+.++++.+- ..+|+|||
T Consensus 73 ~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~~fge~~~~iilVG 152 (343)
T KOG2564|consen 73 EGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKVENEDDLSLETMSKDFGAVIKELFGELPPQIILVG 152 (343)
T ss_pred CccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCccccCChhhcCHHHHHHHHHHHHHHHhccCCCceEEEe
Confidence 6789999999999999999999998877 78899999999999764 456789999999999998873 45899999
Q ss_pred eChHHHHHHHHHHh--CCCccCeEEEecCC
Q 024392 171 NSLGGFAALVAAVG--LPDQVTGVALLNSA 198 (268)
Q Consensus 171 ~S~Gg~~a~~~a~~--~p~~v~~lvl~~~~ 198 (268)
|||||.++.+.+.. -|. +.|++.++-.
T Consensus 153 HSmGGaIav~~a~~k~lps-l~Gl~viDVV 181 (343)
T KOG2564|consen 153 HSMGGAIAVHTAASKTLPS-LAGLVVIDVV 181 (343)
T ss_pred ccccchhhhhhhhhhhchh-hhceEEEEEe
Confidence 99999999887754 464 8999988874
No 55
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.53 E-value=4.5e-13 Score=118.95 Aligned_cols=119 Identities=14% Similarity=0.167 Sum_probs=88.1
Q ss_pred EEeeCCeEEEEEEc----cCCCcEEEECCCCCChhhH-----HHhHHHHHhc-CeEEEEcCCCCCCCCcccccCCHHHHH
Q 024392 82 FWTWRGHKIHYVVQ----GEGSPVVLIHGFGASAFHW-----RYNIPELAKR-YKVYAVDLLGFGWSEKAIIEYDAMVWK 151 (268)
Q Consensus 82 ~~~~~g~~~~~~~~----g~~~~vv~lHG~~~~~~~~-----~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~ 151 (268)
..+.++..++.... ..++|||++||+..+...+ ..+++.|.++ |+|+++|++|+|.++.. .+.+++.
T Consensus 42 v~~~~~~~l~~~~~~~~~~~~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~---~~~~d~~ 118 (350)
T TIGR01836 42 VYREDKVVLYRYTPVKDNTHKTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRY---LTLDDYI 118 (350)
T ss_pred EEEcCcEEEEEecCCCCcCCCCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhc---CCHHHHH
Confidence 34555556553332 1245899999986555443 5788999887 99999999999987543 3555554
Q ss_pred HH-HH----HHHHHhcCCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCCCCCC
Q 024392 152 DQ-IV----DFLKEIVKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQFGD 203 (268)
Q Consensus 152 ~~-~~----~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~ 203 (268)
.+ +. .+.+..+.++++++||||||.+++.++..+|++++++|+++++..+..
T Consensus 119 ~~~~~~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~ 175 (350)
T TIGR01836 119 NGYIDKCVDYICRTSKLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFET 175 (350)
T ss_pred HHHHHHHHHHHHHHhCCCcccEEEECHHHHHHHHHHHhCchheeeEEEeccccccCC
Confidence 32 43 344455778999999999999999999999999999999999876543
No 56
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.52 E-value=9.1e-14 Score=124.55 Aligned_cols=118 Identities=19% Similarity=0.222 Sum_probs=94.4
Q ss_pred eeCCeEEEEEEccC-----CCcEEEECCCCCChhh-------------HHHhHH---HHHh-cCeEEEEcCCCCCCCCcc
Q 024392 84 TWRGHKIHYVVQGE-----GSPVVLIHGFGASAFH-------------WRYNIP---ELAK-RYKVYAVDLLGFGWSEKA 141 (268)
Q Consensus 84 ~~~g~~~~~~~~g~-----~~~vv~lHG~~~~~~~-------------~~~~~~---~l~~-~~~v~~~d~~G~G~s~~~ 141 (268)
+....++.|..+|. .++||+.|+++++... |..++- .|.- +|.||++|..|.|.|..+
T Consensus 37 ~l~~~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p 116 (389)
T PRK06765 37 TIPDVQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDP 116 (389)
T ss_pred CcCCceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCC
Confidence 45678899999983 4689999999986532 555542 2433 499999999987653211
Q ss_pred ---------------------cccCCHHHHHHHHHHHHHHhcCCCeE-EEEeChHHHHHHHHHHhCCCccCeEEEecCCC
Q 024392 142 ---------------------IIEYDAMVWKDQIVDFLKEIVKEPAV-LVGNSLGGFAALVAAVGLPDQVTGVALLNSAG 199 (268)
Q Consensus 142 ---------------------~~~~~~~~~~~~~~~~l~~~~~~~~~-lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 199 (268)
-..++..++++++.+++++++++++. ++||||||+++++++.++|++|+++|++++..
T Consensus 117 ~~g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~ 196 (389)
T PRK06765 117 NVITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNP 196 (389)
T ss_pred CCCCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEecCC
Confidence 12368999999999999999999986 99999999999999999999999999998875
Q ss_pred CC
Q 024392 200 QF 201 (268)
Q Consensus 200 ~~ 201 (268)
..
T Consensus 197 ~~ 198 (389)
T PRK06765 197 QN 198 (389)
T ss_pred CC
Confidence 43
No 57
>PRK11071 esterase YqiA; Provisional
Probab=99.52 E-value=1.2e-13 Score=112.20 Aligned_cols=88 Identities=23% Similarity=0.234 Sum_probs=74.6
Q ss_pred CcEEEECCCCCChhhHHH--hHHHHHh---cCeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHHhcCCCeEEEEeCh
Q 024392 99 SPVVLIHGFGASAFHWRY--NIPELAK---RYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVKEPAVLVGNSL 173 (268)
Q Consensus 99 ~~vv~lHG~~~~~~~~~~--~~~~l~~---~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~lvG~S~ 173 (268)
|+||++||++++...|.. +.+.+.+ +|+|+++|+||++ ++.++++.+++++++.++++++||||
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~-----------~~~~~~l~~l~~~~~~~~~~lvG~S~ 70 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP-----------ADAAELLESLVLEHGGDPLGLVGSSL 70 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH-----------HHHHHHHHHHHHHcCCCCeEEEEECH
Confidence 679999999999999874 3455655 4999999999984 35678899999999999999999999
Q ss_pred HHHHHHHHHHhCCCccCeEEEecCCCC
Q 024392 174 GGFAALVAAVGLPDQVTGVALLNSAGQ 200 (268)
Q Consensus 174 Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 200 (268)
||.+++.++.++|. .+|+++|+..
T Consensus 71 Gg~~a~~~a~~~~~---~~vl~~~~~~ 94 (190)
T PRK11071 71 GGYYATWLSQCFML---PAVVVNPAVR 94 (190)
T ss_pred HHHHHHHHHHHcCC---CEEEECCCCC
Confidence 99999999999983 4688888654
No 58
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.50 E-value=5.9e-13 Score=110.17 Aligned_cols=114 Identities=37% Similarity=0.607 Sum_probs=92.2
Q ss_pred eCCeEEEEEEccC-CCcEEEECCCCCChhhHHHhHHHHHhc---CeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 024392 85 WRGHKIHYVVQGE-GSPVVLIHGFGASAFHWRYNIPELAKR---YKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKE 160 (268)
Q Consensus 85 ~~g~~~~~~~~g~-~~~vv~lHG~~~~~~~~~~~~~~l~~~---~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~ 160 (268)
..+..+.|...+. +|+++++||++++...|......+... |+++.+|+||||.|. .. .+.....++++..++++
T Consensus 7 ~~~~~~~~~~~~~~~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~~-~~~~~~~~~~~~~~~~~ 84 (282)
T COG0596 7 ADGVRLAYREAGGGGPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSD-PA-GYSLSAYADDLAALLDA 84 (282)
T ss_pred CCCeEEEEeecCCCCCeEEEeCCCCCchhhhHHHHHHhhccccceEEEEecccCCCCCC-cc-cccHHHHHHHHHHHHHH
Confidence 3455566665553 568999999999999888743333332 899999999999997 11 33445558999999999
Q ss_pred hcCCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCCC
Q 024392 161 IVKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQ 200 (268)
Q Consensus 161 ~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 200 (268)
++.+++.++|||+||.++..++.++|++++++|++++...
T Consensus 85 ~~~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~ 124 (282)
T COG0596 85 LGLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPP 124 (282)
T ss_pred hCCCceEEEEecccHHHHHHHHHhcchhhheeeEecCCCC
Confidence 9988899999999999999999999999999999998754
No 59
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.48 E-value=5.5e-13 Score=123.17 Aligned_cols=115 Identities=12% Similarity=0.092 Sum_probs=87.5
Q ss_pred EEEEEcc---CCCcEEEECCCCCChhhHH-----HhHHHHHhc-CeEEEEcCCCCCCCCccc--ccCCHHHHHHHHHHHH
Q 024392 90 IHYVVQG---EGSPVVLIHGFGASAFHWR-----YNIPELAKR-YKVYAVDLLGFGWSEKAI--IEYDAMVWKDQIVDFL 158 (268)
Q Consensus 90 ~~~~~~g---~~~~vv~lHG~~~~~~~~~-----~~~~~l~~~-~~v~~~d~~G~G~s~~~~--~~~~~~~~~~~~~~~l 158 (268)
++|.... .++|||++||+......|+ .+++.|.++ |+|+++|++|+|.+.... .+|..+.+.+++..++
T Consensus 177 i~Y~P~t~~~~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al~~v~ 256 (532)
T TIGR01838 177 IQYEPTTETVHKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKTFDDYIRDGVIAALEVVE 256 (532)
T ss_pred EEeCCCCCcCCCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCChhhhHHHHHHHHHHHHH
Confidence 4565432 3579999999987776664 688998887 999999999999886532 2333344555677777
Q ss_pred HHhcCCCeEEEEeChHHHHHH----HHHHhC-CCccCeEEEecCCCCCCCC
Q 024392 159 KEIVKEPAVLVGNSLGGFAAL----VAAVGL-PDQVTGVALLNSAGQFGDG 204 (268)
Q Consensus 159 ~~~~~~~~~lvG~S~Gg~~a~----~~a~~~-p~~v~~lvl~~~~~~~~~~ 204 (268)
+.++.++++++||||||.++. .++..+ +++|++++++++..++...
T Consensus 257 ~~~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~ 307 (532)
T TIGR01838 257 AITGEKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDP 307 (532)
T ss_pred HhcCCCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCc
Confidence 777889999999999999852 345555 7889999999999887654
No 60
>PRK10566 esterase; Provisional
Probab=99.47 E-value=6.4e-13 Score=112.07 Aligned_cols=107 Identities=21% Similarity=0.232 Sum_probs=75.3
Q ss_pred EEEEEcc----CCCcEEEECCCCCChhhHHHhHHHHHhc-CeEEEEcCCCCCCCCcccccCCH-------HHHHHHHHHH
Q 024392 90 IHYVVQG----EGSPVVLIHGFGASAFHWRYNIPELAKR-YKVYAVDLLGFGWSEKAIIEYDA-------MVWKDQIVDF 157 (268)
Q Consensus 90 ~~~~~~g----~~~~vv~lHG~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~-------~~~~~~~~~~ 157 (268)
++|...+ +.|+||++||++++...|..+.+.|+++ |.|+++|+||||.+......... ....+|+.++
T Consensus 15 ~~~~p~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (249)
T PRK10566 15 LHAFPAGQRDTPLPTVFFYHGFTSSKLVYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTL 94 (249)
T ss_pred EEEcCCCCCCCCCCEEEEeCCCCcccchHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHH
Confidence 5555543 3478999999999998899999999887 99999999999976322111111 1223444444
Q ss_pred HHHh------cCCCeEEEEeChHHHHHHHHHHhCCCccCeEEEec
Q 024392 158 LKEI------VKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLN 196 (268)
Q Consensus 158 l~~~------~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~ 196 (268)
++.+ +.++++++|||+||.+++.++.++|+....+++++
T Consensus 95 ~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~ 139 (249)
T PRK10566 95 RAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMG 139 (249)
T ss_pred HHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeC
Confidence 4432 35689999999999999999999886333444433
No 61
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.47 E-value=5e-13 Score=102.96 Aligned_cols=91 Identities=31% Similarity=0.396 Sum_probs=74.5
Q ss_pred cEEEECCCCCChhhHHHhHHHHHhc-CeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHH-H-HhcCCCeEEEEeChHHH
Q 024392 100 PVVLIHGFGASAFHWRYNIPELAKR-YKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFL-K-EIVKEPAVLVGNSLGGF 176 (268)
Q Consensus 100 ~vv~lHG~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l-~-~~~~~~~~lvG~S~Gg~ 176 (268)
+||++||++++...|..+.+.|+++ |.|+.+|+|++|.+.... . .+++.+.+ + ..+.++++++|||+||.
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~---~----~~~~~~~~~~~~~~~~~i~l~G~S~Gg~ 73 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQGYAVVAFDYPGHGDSDGAD---A----VERVLADIRAGYPDPDRIILIGHSMGGA 73 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHTTEEEEEESCTTSTTSHHSH---H----HHHHHHHHHHHHCTCCEEEEEEETHHHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCCccchhH---H----HHHHHHHHHhhcCCCCcEEEEEEccCcH
Confidence 5899999999999999999999998 999999999999874331 1 22222222 1 13668999999999999
Q ss_pred HHHHHHHhCCCccCeEEEecCC
Q 024392 177 AALVAAVGLPDQVTGVALLNSA 198 (268)
Q Consensus 177 ~a~~~a~~~p~~v~~lvl~~~~ 198 (268)
+++.++.++ ++++++|++++.
T Consensus 74 ~a~~~~~~~-~~v~~~v~~~~~ 94 (145)
T PF12695_consen 74 IAANLAARN-PRVKAVVLLSPY 94 (145)
T ss_dssp HHHHHHHHS-TTESEEEEESES
T ss_pred HHHHHhhhc-cceeEEEEecCc
Confidence 999999998 689999999993
No 62
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.46 E-value=5.2e-13 Score=113.72 Aligned_cols=106 Identities=22% Similarity=0.187 Sum_probs=73.9
Q ss_pred CCCcEEEECCCCCChh--hHHHhHHHHHhc-CeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHHh----cCCCeEEE
Q 024392 97 EGSPVVLIHGFGASAF--HWRYNIPELAKR-YKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEI----VKEPAVLV 169 (268)
Q Consensus 97 ~~~~vv~lHG~~~~~~--~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~lv 169 (268)
..|.||++||+.|++. ....+++.+.++ |.|+++|.|||+.+...........+.+|+..+++++ ...+++.|
T Consensus 74 ~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~yh~G~t~D~~~~l~~l~~~~~~r~~~av 153 (345)
T COG0429 74 KKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLYHSGETEDIRFFLDWLKARFPPRPLYAV 153 (345)
T ss_pred CCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCcceecccchhHHHHHHHHHHHhCCCCceEEE
Confidence 4579999999988775 335567888887 9999999999999877443332223335665555544 45799999
Q ss_pred EeChHH-HHHHHHHHhCCC-ccCeEEEecCCCCCC
Q 024392 170 GNSLGG-FAALVAAVGLPD-QVTGVALLNSAGQFG 202 (268)
Q Consensus 170 G~S~Gg-~~a~~~a~~~p~-~v~~lvl~~~~~~~~ 202 (268)
|.|+|| +++.+++.+..+ .+++.+.++.+.++.
T Consensus 154 G~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~ 188 (345)
T COG0429 154 GFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLE 188 (345)
T ss_pred EecccHHHHHHHHHhhccCcccceeeeeeCHHHHH
Confidence 999999 555555554322 466777777766553
No 63
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.45 E-value=1.1e-12 Score=111.94 Aligned_cols=103 Identities=25% Similarity=0.450 Sum_probs=92.6
Q ss_pred CCCcEEEECCCCCChhhHHHhHHHHHhc--CeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHHhc----CCCeEEEE
Q 024392 97 EGSPVVLIHGFGASAFHWRYNIPELAKR--YKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIV----KEPAVLVG 170 (268)
Q Consensus 97 ~~~~vv~lHG~~~~~~~~~~~~~~l~~~--~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~lvG 170 (268)
+.|+++++||+.+++..|..+...|++. ..|+.+|.|-||.|.... ..+...+++|+..+++..+ ..+++++|
T Consensus 51 ~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~-~h~~~~ma~dv~~Fi~~v~~~~~~~~~~l~G 129 (315)
T KOG2382|consen 51 RAPPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKIT-VHNYEAMAEDVKLFIDGVGGSTRLDPVVLLG 129 (315)
T ss_pred CCCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCcccc-ccCHHHHHHHHHHHHHHcccccccCCceecc
Confidence 6799999999999999999999999988 899999999999998753 4568889999999999874 56999999
Q ss_pred eChHH-HHHHHHHHhCCCccCeEEEecCCCC
Q 024392 171 NSLGG-FAALVAAVGLPDQVTGVALLNSAGQ 200 (268)
Q Consensus 171 ~S~Gg-~~a~~~a~~~p~~v~~lvl~~~~~~ 200 (268)
||||| .+++..+...|+.+..+|+++-++.
T Consensus 130 HsmGG~~~~m~~t~~~p~~~~rliv~D~sP~ 160 (315)
T KOG2382|consen 130 HSMGGVKVAMAETLKKPDLIERLIVEDISPG 160 (315)
T ss_pred cCcchHHHHHHHHHhcCcccceeEEEecCCc
Confidence 99999 8888888899999999999998774
No 64
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.45 E-value=1.3e-11 Score=103.24 Aligned_cols=103 Identities=25% Similarity=0.381 Sum_probs=91.8
Q ss_pred cEEEECCCCCChhhHHHhHHHHHhc-CeEEEEcCCCCCCCCcc-cccCCHHHHHHHHHHHHHHhcCC-CeEEEEeChHHH
Q 024392 100 PVVLIHGFGASAFHWRYNIPELAKR-YKVYAVDLLGFGWSEKA-IIEYDAMVWKDQIVDFLKEIVKE-PAVLVGNSLGGF 176 (268)
Q Consensus 100 ~vv~lHG~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~-~~~~~~~~~~~~~~~~l~~~~~~-~~~lvG~S~Gg~ 176 (268)
+||-+||.+|+..++..+...|.+. .++|.+++||+|.+.+. ...++..+-..-+.++++.++++ ++..+|||.|+-
T Consensus 37 TVv~~hGsPGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l~i~~~~i~~gHSrGce 116 (297)
T PF06342_consen 37 TVVAFHGSPGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDELGIKGKLIFLGHSRGCE 116 (297)
T ss_pred eEEEecCCCCCccchhhhhhHHHHcCeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHHcCCCCceEEEEeccchH
Confidence 7999999999999999999999998 99999999999999875 46678888888999999999875 789999999999
Q ss_pred HHHHHHHhCCCccCeEEEecCCCCCCCC
Q 024392 177 AALVAAVGLPDQVTGVALLNSAGQFGDG 204 (268)
Q Consensus 177 ~a~~~a~~~p~~v~~lvl~~~~~~~~~~ 204 (268)
.|+.++..+| ..|+++++|.+-....
T Consensus 117 nal~la~~~~--~~g~~lin~~G~r~Hk 142 (297)
T PF06342_consen 117 NALQLAVTHP--LHGLVLINPPGLRPHK 142 (297)
T ss_pred HHHHHHhcCc--cceEEEecCCcccccc
Confidence 9999999996 6799999998754433
No 65
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.42 E-value=9.5e-13 Score=108.58 Aligned_cols=101 Identities=21% Similarity=0.228 Sum_probs=83.1
Q ss_pred CCcEEEECCCCCChhhHHHhHHHHHhc--CeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHHhc--CCCeEEEEeCh
Q 024392 98 GSPVVLIHGFGASAFHWRYNIPELAKR--YKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIV--KEPAVLVGNSL 173 (268)
Q Consensus 98 ~~~vv~lHG~~~~~~~~~~~~~~l~~~--~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~lvG~S~ 173 (268)
.+++++.||...+......+...|..+ ++++.+|+.|+|.|.+.+.+.+..+..+.+.+.+++-. .++++|+|+|+
T Consensus 60 ~~~lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~n~y~Di~avye~Lr~~~g~~~~Iil~G~Si 139 (258)
T KOG1552|consen 60 HPTLLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSERNLYADIKAVYEWLRNRYGSPERIILYGQSI 139 (258)
T ss_pred ceEEEEcCCcccchHHHHHHHHHHhhcccceEEEEecccccccCCCcccccchhhHHHHHHHHHhhcCCCceEEEEEecC
Confidence 378999999987777666777777774 99999999999999998777666555555555555543 57999999999
Q ss_pred HHHHHHHHHHhCCCccCeEEEecCCCC
Q 024392 174 GGFAALVAAVGLPDQVTGVALLNSAGQ 200 (268)
Q Consensus 174 Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 200 (268)
|...++.+|.+.| ++++|+.+|...
T Consensus 140 Gt~~tv~Lasr~~--~~alVL~SPf~S 164 (258)
T KOG1552|consen 140 GTVPTVDLASRYP--LAAVVLHSPFTS 164 (258)
T ss_pred CchhhhhHhhcCC--cceEEEeccchh
Confidence 9999999999999 999999999643
No 66
>PLN02872 triacylglycerol lipase
Probab=99.42 E-value=4.8e-13 Score=120.00 Aligned_cols=127 Identities=20% Similarity=0.274 Sum_probs=95.5
Q ss_pred CCCCCceEEeeCCeEEEEEEcc---------CCCcEEEECCCCCChhhHH------HhHHHHHhc-CeEEEEcCCCCCCC
Q 024392 75 FKPEGYNFWTWRGHKIHYVVQG---------EGSPVVLIHGFGASAFHWR------YNIPELAKR-YKVYAVDLLGFGWS 138 (268)
Q Consensus 75 ~~~~~~~~~~~~g~~~~~~~~g---------~~~~vv~lHG~~~~~~~~~------~~~~~l~~~-~~v~~~d~~G~G~s 138 (268)
++.+...+.+.||+.+...... ++|+|+++||+..+++.|. .+...|+++ |+|+.+|.||++.|
T Consensus 42 y~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~~s 121 (395)
T PLN02872 42 YSCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTRWS 121 (395)
T ss_pred CCceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCcccccccccccc
Confidence 4455556678899888866531 2579999999999888873 344567776 99999999998865
Q ss_pred Cc----c--c---ccCCHHHHH-HHHHHHHHHh---cCCCeEEEEeChHHHHHHHHHHhCCC---ccCeEEEecCCCCCC
Q 024392 139 EK----A--I---IEYDAMVWK-DQIVDFLKEI---VKEPAVLVGNSLGGFAALVAAVGLPD---QVTGVALLNSAGQFG 202 (268)
Q Consensus 139 ~~----~--~---~~~~~~~~~-~~~~~~l~~~---~~~~~~lvG~S~Gg~~a~~~a~~~p~---~v~~lvl~~~~~~~~ 202 (268)
.+ . . ..+++++++ .|+.++++++ ..++++++||||||.+++.++ .+|+ +|+.+++++|.....
T Consensus 122 ~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~~~~ 200 (395)
T PLN02872 122 YGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITNSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPISYLD 200 (395)
T ss_pred cCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccCCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchhhhc
Confidence 32 1 1 145777777 7999999876 347999999999999998554 5676 688889999976543
No 67
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.42 E-value=6.5e-13 Score=109.64 Aligned_cols=74 Identities=27% Similarity=0.457 Sum_probs=69.5
Q ss_pred CeEEEEcCCCCCCCCc----ccccCCHHHHHHHHHHHHHHhcCCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCC
Q 024392 125 YKVYAVDLLGFGWSEK----AIIEYDAMVWKDQIVDFLKEIVKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSA 198 (268)
Q Consensus 125 ~~v~~~d~~G~G~s~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~ 198 (268)
|+|+++|+||+|.|+. ....++.+++++++..+++.++.++++++||||||.+++.++.++|++|+++|++++.
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~ 78 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPERVKKLVLISPP 78 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESES
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEeee
Confidence 6899999999999995 3467789999999999999999999999999999999999999999999999999996
No 68
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.39 E-value=5.8e-12 Score=120.07 Aligned_cols=122 Identities=18% Similarity=0.122 Sum_probs=92.9
Q ss_pred CceEEeeCCeEEEEEEccCC-----------CcEEEECCCCCChhhHHHhHHHHHhc-CeEEEEcCCCCCCCCcc-----
Q 024392 79 GYNFWTWRGHKIHYVVQGEG-----------SPVVLIHGFGASAFHWRYNIPELAKR-YKVYAVDLLGFGWSEKA----- 141 (268)
Q Consensus 79 ~~~~~~~~g~~~~~~~~g~~-----------~~vv~lHG~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~----- 141 (268)
..++...++.++.|...+.+ |+||++||++++.+.|..+++.|+++ |+|+++|+||||.|...
T Consensus 419 p~~~~~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~ 498 (792)
T TIGR03502 419 PVLLTTPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDANASG 498 (792)
T ss_pred ceEEEecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEeCCCCCCcccccccccc
Confidence 34566778877777654322 47999999999999999999999876 99999999999998332
Q ss_pred -------cc-----------cCCHHHHHHHHHHHHHHhc----------------CCCeEEEEeChHHHHHHHHHHhCCC
Q 024392 142 -------II-----------EYDAMVWKDQIVDFLKEIV----------------KEPAVLVGNSLGGFAALVAAVGLPD 187 (268)
Q Consensus 142 -------~~-----------~~~~~~~~~~~~~~l~~~~----------------~~~~~lvG~S~Gg~~a~~~a~~~p~ 187 (268)
.. ..++.+.+.|+..+...+. ..+++++||||||.++..++.....
T Consensus 499 ~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~an~ 578 (792)
T TIGR03502 499 VNATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYANT 578 (792)
T ss_pred ccccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHhcCc
Confidence 01 1367888899888877765 2489999999999999999875322
Q ss_pred -----------ccCeEEEecCCCC
Q 024392 188 -----------QVTGVALLNSAGQ 200 (268)
Q Consensus 188 -----------~v~~lvl~~~~~~ 200 (268)
.+....+..|.+.
T Consensus 579 ~~~~~~~~~l~~~~~a~l~~pgGg 602 (792)
T TIGR03502 579 PLGSPTADALYAVNAASLQNPGGG 602 (792)
T ss_pred cccCCccccccccceeeeecCCcc
Confidence 3456666666543
No 69
>PLN00021 chlorophyllase
Probab=99.38 E-value=2.8e-12 Score=111.75 Aligned_cols=100 Identities=17% Similarity=0.258 Sum_probs=74.8
Q ss_pred cCCCcEEEECCCCCChhhHHHhHHHHHhc-CeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHH----H-------hcC
Q 024392 96 GEGSPVVLIHGFGASAFHWRYNIPELAKR-YKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLK----E-------IVK 163 (268)
Q Consensus 96 g~~~~vv~lHG~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~----~-------~~~ 163 (268)
++.|+|||+||++.+...|..+++.|+++ |.|+++|++|++.+.. ....++ ++++.+++. . .+.
T Consensus 50 g~~PvVv~lHG~~~~~~~y~~l~~~Las~G~~VvapD~~g~~~~~~---~~~i~d-~~~~~~~l~~~l~~~l~~~~~~d~ 125 (313)
T PLN00021 50 GTYPVLLFLHGYLLYNSFYSQLLQHIASHGFIVVAPQLYTLAGPDG---TDEIKD-AAAVINWLSSGLAAVLPEGVRPDL 125 (313)
T ss_pred CCCCEEEEECCCCCCcccHHHHHHHHHhCCCEEEEecCCCcCCCCc---hhhHHH-HHHHHHHHHhhhhhhcccccccCh
Confidence 35689999999999998999999999988 9999999998753321 111221 222222222 1 234
Q ss_pred CCeEEEEeChHHHHHHHHHHhCCC-----ccCeEEEecCCC
Q 024392 164 EPAVLVGNSLGGFAALVAAVGLPD-----QVTGVALLNSAG 199 (268)
Q Consensus 164 ~~~~lvG~S~Gg~~a~~~a~~~p~-----~v~~lvl~~~~~ 199 (268)
++++++|||+||.+++.++.++++ +++++|+++|..
T Consensus 126 ~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~ 166 (313)
T PLN00021 126 SKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVD 166 (313)
T ss_pred hheEEEEECcchHHHHHHHhhccccccccceeeEEeecccc
Confidence 689999999999999999998874 689999999854
No 70
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.36 E-value=5.7e-12 Score=104.04 Aligned_cols=104 Identities=15% Similarity=0.133 Sum_probs=72.3
Q ss_pred CCCcEEEECCCCCChhhHH---HhHHHHHhc-CeEEEEcCCCCCCCCcccccC------CHHHHHHHHHHHHHH----hc
Q 024392 97 EGSPVVLIHGFGASAFHWR---YNIPELAKR-YKVYAVDLLGFGWSEKAIIEY------DAMVWKDQIVDFLKE----IV 162 (268)
Q Consensus 97 ~~~~vv~lHG~~~~~~~~~---~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~------~~~~~~~~~~~~l~~----~~ 162 (268)
+.|.||++||.+++...+. .+...+.+. |.|+++|++|++.+......+ .......++.+++++ .+
T Consensus 12 ~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 91 (212)
T TIGR01840 12 PRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANYS 91 (212)
T ss_pred CCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhcC
Confidence 5689999999999887665 244444444 999999999987543211000 001112333333333 22
Q ss_pred --CCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCCC
Q 024392 163 --KEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQ 200 (268)
Q Consensus 163 --~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 200 (268)
.++++++|||+||.+++.++.++|+.+++++.+++...
T Consensus 92 id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~ 131 (212)
T TIGR01840 92 IDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPY 131 (212)
T ss_pred cChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCcc
Confidence 35899999999999999999999999999999988653
No 71
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.36 E-value=5.4e-11 Score=118.86 Aligned_cols=103 Identities=20% Similarity=0.270 Sum_probs=80.2
Q ss_pred CCCcEEEECCCCCChhhHHHh-----HHHHHhc-CeEEEEcCCCCCCCCcccc--cCCHHHHHHHHHHHHHH---hcCCC
Q 024392 97 EGSPVVLIHGFGASAFHWRYN-----IPELAKR-YKVYAVDLLGFGWSEKAII--EYDAMVWKDQIVDFLKE---IVKEP 165 (268)
Q Consensus 97 ~~~~vv~lHG~~~~~~~~~~~-----~~~l~~~-~~v~~~d~~G~G~s~~~~~--~~~~~~~~~~~~~~l~~---~~~~~ 165 (268)
.++|||++||+..+...|+.. ++.|.++ |+|+++|+ |.++.... ..+..+++..+.+.++. +..++
T Consensus 66 ~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~~~~~~~l~~~i~~l~~~l~~v~~~~~~~ 142 (994)
T PRK07868 66 VGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVIDF---GSPDKVEGGMERNLADHVVALSEAIDTVKDVTGRD 142 (994)
T ss_pred CCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEcC---CCCChhHcCccCCHHHHHHHHHHHHHHHHHhhCCc
Confidence 468999999999999999865 7889877 99999994 56654322 34666666666666554 34578
Q ss_pred eEEEEeChHHHHHHHHHHhC-CCccCeEEEecCCCCCC
Q 024392 166 AVLVGNSLGGFAALVAAVGL-PDQVTGVALLNSAGQFG 202 (268)
Q Consensus 166 ~~lvG~S~Gg~~a~~~a~~~-p~~v~~lvl~~~~~~~~ 202 (268)
++++||||||.+++.++..+ +++|+++|+++++.++.
T Consensus 143 v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~ 180 (994)
T PRK07868 143 VHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTL 180 (994)
T ss_pred eEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccC
Confidence 99999999999999988755 56899999999986653
No 72
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.35 E-value=4.6e-12 Score=118.97 Aligned_cols=118 Identities=19% Similarity=0.112 Sum_probs=89.5
Q ss_pred eeCCeEEEEEEc-----cCCCcEEEECCCCCChh---hH-HHhHHHHHhc-CeEEEEcCCCCCCCCcccccCCHHHHHHH
Q 024392 84 TWRGHKIHYVVQ-----GEGSPVVLIHGFGASAF---HW-RYNIPELAKR-YKVYAVDLLGFGWSEKAIIEYDAMVWKDQ 153 (268)
Q Consensus 84 ~~~g~~~~~~~~-----g~~~~vv~lHG~~~~~~---~~-~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~ 153 (268)
..||.++++... ++.|+||++||++.+.. .+ ......|.++ |.|+.+|+||+|.|++...... ...++|
T Consensus 3 ~~DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~~-~~~~~D 81 (550)
T TIGR00976 3 MRDGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLLG-SDEAAD 81 (550)
T ss_pred CCCCCEEEEEEEecCCCCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEecC-cccchH
Confidence 347778874332 24578999999997653 12 2234566666 9999999999999987643343 456778
Q ss_pred HHHHHHHhc-----CCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCCCCC
Q 024392 154 IVDFLKEIV-----KEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQFG 202 (268)
Q Consensus 154 ~~~~l~~~~-----~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~ 202 (268)
+.++++++. ..++.++|||+||.+++.++..+|++++++|..++..+..
T Consensus 82 ~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d~~ 135 (550)
T TIGR00976 82 GYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWDLY 135 (550)
T ss_pred HHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccchh
Confidence 888887763 2489999999999999999999999999999988876543
No 73
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.29 E-value=5e-11 Score=102.39 Aligned_cols=105 Identities=18% Similarity=0.239 Sum_probs=76.8
Q ss_pred CCCcEEEECCCCCChhhHHHh--HHHHHh-c-CeEEEEcC--CCCCCCCcc--------------------cccCCHHH-
Q 024392 97 EGSPVVLIHGFGASAFHWRYN--IPELAK-R-YKVYAVDL--LGFGWSEKA--------------------IIEYDAMV- 149 (268)
Q Consensus 97 ~~~~vv~lHG~~~~~~~~~~~--~~~l~~-~-~~v~~~d~--~G~G~s~~~--------------------~~~~~~~~- 149 (268)
+.|+|+++||++++.+.|... +..+++ . +.|+++|. +|+|.+... ...++..+
T Consensus 41 ~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~ 120 (275)
T TIGR02821 41 PVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYSY 120 (275)
T ss_pred CCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccchHHHH
Confidence 357899999999998877543 344543 4 99999998 555432210 00122333
Q ss_pred HHHHHHHHHHH---hcCCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCCCC
Q 024392 150 WKDQIVDFLKE---IVKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQF 201 (268)
Q Consensus 150 ~~~~~~~~l~~---~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 201 (268)
..+++..+++. ++.+++.++||||||.+++.++.++|+.+++++++++....
T Consensus 121 ~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~ 175 (275)
T TIGR02821 121 IVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIVAP 175 (275)
T ss_pred HHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCccCc
Confidence 35677777776 35578999999999999999999999999999999987553
No 74
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.27 E-value=8.4e-11 Score=97.83 Aligned_cols=100 Identities=24% Similarity=0.311 Sum_probs=85.6
Q ss_pred CcEEEECCCCCChhhHHHhHHHHHhc-CeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHHhcCC-CeEEEEeChHHH
Q 024392 99 SPVVLIHGFGASAFHWRYNIPELAKR-YKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVKE-PAVLVGNSLGGF 176 (268)
Q Consensus 99 ~~vv~lHG~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~lvG~S~Gg~ 176 (268)
++|+++|+.+++...|.++++.+... +.|+.++.+|.+ .......+.++++++..+.+.....+ ++.|+|||+||.
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l~~~~~~v~~i~~~~~~--~~~~~~~si~~la~~y~~~I~~~~~~gp~~L~G~S~Gg~ 78 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARALPDDVIGVYGIEYPGRG--DDEPPPDSIEELASRYAEAIRARQPEGPYVLAGWSFGGI 78 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHHTTTEEEEEEECSTTSC--TTSHEESSHHHHHHHHHHHHHHHTSSSSEEEEEETHHHH
T ss_pred CeEEEEcCCccCHHHHHHHHHhCCCCeEEEEEEecCCCC--CCCCCCCCHHHHHHHHHHHhhhhCCCCCeeehccCccHH
Confidence 47999999999999999999999998 999999999998 33344678999999999888887766 999999999999
Q ss_pred HHHHHHHhC---CCccCeEEEecCCCC
Q 024392 177 AALVAAVGL---PDQVTGVALLNSAGQ 200 (268)
Q Consensus 177 ~a~~~a~~~---p~~v~~lvl~~~~~~ 200 (268)
+|.++|.+. -..+..++++++.+.
T Consensus 79 lA~E~A~~Le~~G~~v~~l~liD~~~p 105 (229)
T PF00975_consen 79 LAFEMARQLEEAGEEVSRLILIDSPPP 105 (229)
T ss_dssp HHHHHHHHHHHTT-SESEEEEESCSST
T ss_pred HHHHHHHHHHHhhhccCceEEecCCCC
Confidence 999999753 445999999998643
No 75
>PLN02442 S-formylglutathione hydrolase
Probab=99.23 E-value=1.7e-10 Score=99.57 Aligned_cols=105 Identities=16% Similarity=0.204 Sum_probs=73.2
Q ss_pred CCCcEEEECCCCCChhhHHH---hHHHHHhc-CeEEEEcCCCCCC-----CCc-------------ccc---cCCH-HHH
Q 024392 97 EGSPVVLIHGFGASAFHWRY---NIPELAKR-YKVYAVDLLGFGW-----SEK-------------AII---EYDA-MVW 150 (268)
Q Consensus 97 ~~~~vv~lHG~~~~~~~~~~---~~~~l~~~-~~v~~~d~~G~G~-----s~~-------------~~~---~~~~-~~~ 150 (268)
+.|+|+++||++++.+.|.. +.+.+... +.|+.+|..++|. +.. ... .... ...
T Consensus 46 ~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (283)
T PLN02442 46 KVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDYV 125 (283)
T ss_pred CCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccchhhhH
Confidence 35789999999998877744 33555655 9999999876651 100 000 0011 112
Q ss_pred HHHHHHHH----HHhcCCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCCCC
Q 024392 151 KDQIVDFL----KEIVKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQF 201 (268)
Q Consensus 151 ~~~~~~~l----~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 201 (268)
.+++..++ +.++.++++++||||||..++.++.++|+++++++.+++..++
T Consensus 126 ~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~ 180 (283)
T PLN02442 126 VKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIANP 180 (283)
T ss_pred HHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccCc
Confidence 33343333 4456789999999999999999999999999999999997653
No 76
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.23 E-value=1.8e-11 Score=98.09 Aligned_cols=125 Identities=20% Similarity=0.208 Sum_probs=94.5
Q ss_pred CCCceEEeeCCeEEEEE-E--ccCCCcEEEECCCCCChhhHHHhHHHHHhc--CeEEEEcCCCCCCCCcccccCCHHHHH
Q 024392 77 PEGYNFWTWRGHKIHYV-V--QGEGSPVVLIHGFGASAFHWRYNIPELAKR--YKVYAVDLLGFGWSEKAIIEYDAMVWK 151 (268)
Q Consensus 77 ~~~~~~~~~~g~~~~~~-~--~g~~~~vv~lHG~~~~~~~~~~~~~~l~~~--~~v~~~d~~G~G~s~~~~~~~~~~~~~ 151 (268)
.+..++.+.|..+++-+ . ..+.|+++++|+..++-...-+.+.-+-.+ .+|+.+++||||.|.+.+.+....-.+
T Consensus 54 ye~i~l~T~D~vtL~a~~~~~E~S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~GspsE~GL~lDs 133 (300)
T KOG4391|consen 54 YERIELRTRDKVTLDAYLMLSESSRPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSPSEEGLKLDS 133 (300)
T ss_pred ceEEEEEcCcceeEeeeeecccCCCceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccccCCCCccccceeccH
Confidence 34556678888888733 2 236799999999999987666666655444 899999999999999977555443333
Q ss_pred HHHHHHHHH---hcCCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCCCC
Q 024392 152 DQIVDFLKE---IVKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQF 201 (268)
Q Consensus 152 ~~~~~~l~~---~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 201 (268)
+.+.+.+.. ++..++++.|.|+||.+|..+|+++.+++.++|+-++....
T Consensus 134 ~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SI 186 (300)
T KOG4391|consen 134 EAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSI 186 (300)
T ss_pred HHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccc
Confidence 433333322 23458999999999999999999999999999999987655
No 77
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.23 E-value=1.2e-10 Score=102.63 Aligned_cols=102 Identities=22% Similarity=0.297 Sum_probs=72.5
Q ss_pred CCCcEEEECCCCCChh-h-HHHhHHHHHhc-CeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHHh----cCCCeEEE
Q 024392 97 EGSPVVLIHGFGASAF-H-WRYNIPELAKR-YKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEI----VKEPAVLV 169 (268)
Q Consensus 97 ~~~~vv~lHG~~~~~~-~-~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~lv 169 (268)
..|.||++||+.+++. . ...++..+.++ |++++++.||+|.+.-.....-...+.+|+.++++++ ...+++.+
T Consensus 124 ~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtTpr~f~ag~t~Dl~~~v~~i~~~~P~a~l~av 203 (409)
T KOG1838|consen 124 TDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTTPRLFTAGWTEDLREVVNHIKKRYPQAPLFAV 203 (409)
T ss_pred CCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccCCCceeecCCHHHHHHHHHHHHHhCCCCceEEE
Confidence 4589999999888774 3 35566666666 9999999999998877543333333456666666555 34589999
Q ss_pred EeChHHHHHHHHHHhCCC---ccCeEEEecCC
Q 024392 170 GNSLGGFAALVAAVGLPD---QVTGVALLNSA 198 (268)
Q Consensus 170 G~S~Gg~~a~~~a~~~p~---~v~~lvl~~~~ 198 (268)
|.||||++...|..+..+ .+.++.+.+|.
T Consensus 204 G~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pw 235 (409)
T KOG1838|consen 204 GFSMGGNILTNYLGEEGDNTPLIAAVAVCNPW 235 (409)
T ss_pred EecchHHHHHHHhhhccCCCCceeEEEEeccc
Confidence 999999999999876533 34455555543
No 78
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.16 E-value=1.8e-10 Score=99.80 Aligned_cols=118 Identities=20% Similarity=0.282 Sum_probs=91.0
Q ss_pred eeCCeEEEEEEccC-----CCcEEEECCCCCChhh-----------HHHhH---HHHHh-cCeEEEEcCCCCC-CCCccc
Q 024392 84 TWRGHKIHYVVQGE-----GSPVVLIHGFGASAFH-----------WRYNI---PELAK-RYKVYAVDLLGFG-WSEKAI 142 (268)
Q Consensus 84 ~~~g~~~~~~~~g~-----~~~vv~lHG~~~~~~~-----------~~~~~---~~l~~-~~~v~~~d~~G~G-~s~~~~ 142 (268)
..++..+.|+.+|. ...|+++||+.++... |..++ +.+.- +|.||+.|..|.. .|+++.
T Consensus 32 ~l~~~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~ 111 (368)
T COG2021 32 VLSDARVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPS 111 (368)
T ss_pred cccCcEEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCC
Confidence 45677888999882 3579999999997643 33332 12333 3999999999875 333321
Q ss_pred -------------ccCCHHHHHHHHHHHHHHhcCCCeE-EEEeChHHHHHHHHHHhCCCccCeEEEecCCCCC
Q 024392 143 -------------IEYDAMVWKDQIVDFLKEIVKEPAV-LVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQF 201 (268)
Q Consensus 143 -------------~~~~~~~~~~~~~~~l~~~~~~~~~-lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 201 (268)
...++.|+++.-..+++++|++++. ++|-||||+.+++++..+|++|+.+|.++++...
T Consensus 112 s~~p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~ 184 (368)
T COG2021 112 SINPGGKPYGSDFPVITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARL 184 (368)
T ss_pred CcCCCCCccccCCCcccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccC
Confidence 2357788888888889999999986 9999999999999999999999999999997643
No 79
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.16 E-value=2.1e-10 Score=79.31 Aligned_cols=73 Identities=29% Similarity=0.385 Sum_probs=60.4
Q ss_pred CeEEEEEEcc---C-CCcEEEECCCCCChhhHHHhHHHHHhc-CeEEEEcCCCCCCCCccc-ccCCHHHHHHHHHHHHH
Q 024392 87 GHKIHYVVQG---E-GSPVVLIHGFGASAFHWRYNIPELAKR-YKVYAVDLLGFGWSEKAI-IEYDAMVWKDQIVDFLK 159 (268)
Q Consensus 87 g~~~~~~~~g---~-~~~vv~lHG~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~-~~~~~~~~~~~~~~~l~ 159 (268)
|.+++|..+. + +.+|+++||++++...|..+++.|+++ |.|+++|+||||+|++.. ...+++++++|+..+++
T Consensus 1 G~~L~~~~w~p~~~~k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 1 GTKLFYRRWKPENPPKAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred CcEEEEEEecCCCCCCEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHHhC
Confidence 4567766653 2 448999999999999999999999999 999999999999998743 34578889999988763
No 80
>PRK11460 putative hydrolase; Provisional
Probab=99.14 E-value=5.4e-10 Score=93.60 Aligned_cols=102 Identities=17% Similarity=0.120 Sum_probs=69.5
Q ss_pred CCCcEEEECCCCCChhhHHHhHHHHHhc-CeEEEEcCCCCCCCCcc-----------cccCC---HHHHHHHHHHHHHH-
Q 024392 97 EGSPVVLIHGFGASAFHWRYNIPELAKR-YKVYAVDLLGFGWSEKA-----------IIEYD---AMVWKDQIVDFLKE- 160 (268)
Q Consensus 97 ~~~~vv~lHG~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~-----------~~~~~---~~~~~~~~~~~l~~- 160 (268)
..+.||++||++++...|..+.+.|.+. +.+..++.+|...+... ..... ..+..+.+.+.++.
T Consensus 15 ~~~~vIlLHG~G~~~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~~~ 94 (232)
T PRK11460 15 AQQLLLLFHGVGDNPVAMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVRYW 94 (232)
T ss_pred CCcEEEEEeCCCCChHHHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHHHH
Confidence 3578999999999999999999999876 55555555554322100 00111 12222333333332
Q ss_pred ---hc--CCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCC
Q 024392 161 ---IV--KEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSA 198 (268)
Q Consensus 161 ---~~--~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~ 198 (268)
.+ .++++++|||+||.+++.++.++|+.+.+++.+++.
T Consensus 95 ~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~ 137 (232)
T PRK11460 95 QQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGR 137 (232)
T ss_pred HHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccc
Confidence 23 358999999999999999999999888888888764
No 81
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.12 E-value=5.6e-09 Score=88.38 Aligned_cols=117 Identities=16% Similarity=0.195 Sum_probs=82.4
Q ss_pred eeCCeEEEEEEcc----CCCcEEEECCCCCChhh-HHHh-----HHHHHhcCeEEEEcCCCCCCCCcc-c---ccCCHHH
Q 024392 84 TWRGHKIHYVVQG----EGSPVVLIHGFGASAFH-WRYN-----IPELAKRYKVYAVDLLGFGWSEKA-I---IEYDAMV 149 (268)
Q Consensus 84 ~~~g~~~~~~~~g----~~~~vv~lHG~~~~~~~-~~~~-----~~~l~~~~~v~~~d~~G~G~s~~~-~---~~~~~~~ 149 (268)
+..-..+++...| ++|++|-.|-.+.|... |..+ +..+.+++.++=+|.||+..-... + .-.++++
T Consensus 5 ~t~~G~v~V~v~G~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~f~i~Hi~aPGqe~ga~~~p~~y~yPsmd~ 84 (283)
T PF03096_consen 5 ETPYGSVHVTVQGDPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQNFCIYHIDAPGQEEGAATLPEGYQYPSMDQ 84 (283)
T ss_dssp EETTEEEEEEEESS--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTTSEEEEEE-TTTSTT-----TT-----HHH
T ss_pred ccCceEEEEEEEecCCCCCceEEEeccccccchHHHHHHhcchhHHHHhhceEEEEEeCCCCCCCcccccccccccCHHH
Confidence 3344466666665 37899999999988865 5544 466788899999999999755432 2 2348899
Q ss_pred HHHHHHHHHHHhcCCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCCC
Q 024392 150 WKDQIVDFLKEIVKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQ 200 (268)
Q Consensus 150 ~~~~~~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 200 (268)
+++++..++++++.+.++-+|--.|+++-.++|..||++|.|+|++++.+.
T Consensus 85 LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~ 135 (283)
T PF03096_consen 85 LAEMLPEVLDHFGLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCT 135 (283)
T ss_dssp HHCTHHHHHHHHT---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S
T ss_pred HHHHHHHHHHhCCccEEEEEeeccchhhhhhccccCccceeEEEEEecCCC
Confidence 999999999999999999999999999999999999999999999999764
No 82
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.11 E-value=3.8e-09 Score=88.62 Aligned_cols=115 Identities=18% Similarity=0.234 Sum_probs=93.3
Q ss_pred eEEEEEEcc----CCCcEEEECCCCCChhh-HHHh-----HHHHHhcCeEEEEcCCCCCCCCcc-c---ccCCHHHHHHH
Q 024392 88 HKIHYVVQG----EGSPVVLIHGFGASAFH-WRYN-----IPELAKRYKVYAVDLLGFGWSEKA-I---IEYDAMVWKDQ 153 (268)
Q Consensus 88 ~~~~~~~~g----~~~~vv~lHG~~~~~~~-~~~~-----~~~l~~~~~v~~~d~~G~G~s~~~-~---~~~~~~~~~~~ 153 (268)
..+++...| ++|.+|-.|..+-+..+ |..+ +..+.++|.++-+|.||+-..... + .-.+.++++++
T Consensus 32 G~v~V~V~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~fcv~HV~~PGqe~gAp~~p~~y~yPsmd~LAd~ 111 (326)
T KOG2931|consen 32 GVVHVTVYGDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEHFCVYHVDAPGQEDGAPSFPEGYPYPSMDDLADM 111 (326)
T ss_pred ccEEEEEecCCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHhheEEEecCCCccccCCccCCCCCCCCCHHHHHHH
Confidence 345555554 36788999999988865 5544 456777799999999998544332 1 23489999999
Q ss_pred HHHHHHHhcCCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCCCCC
Q 024392 154 IVDFLKEIVKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQFG 202 (268)
Q Consensus 154 ~~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~ 202 (268)
+..++++++.+.++-+|.--|+++..++|..||++|.|||++++.+.-.
T Consensus 112 l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~ 160 (326)
T KOG2931|consen 112 LPEVLDHFGLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAK 160 (326)
T ss_pred HHHHHHhcCcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCc
Confidence 9999999999999999999999999999999999999999999976533
No 83
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.09 E-value=1.2e-09 Score=90.84 Aligned_cols=104 Identities=25% Similarity=0.305 Sum_probs=68.5
Q ss_pred CCCcEEEECCCCCChhhHHHhHHHHHh---------cCeEEEEcCCCCCCCCcc-cccCCHHHHHHHHHHHHHHh-----
Q 024392 97 EGSPVVLIHGFGASAFHWRYNIPELAK---------RYKVYAVDLLGFGWSEKA-IIEYDAMVWKDQIVDFLKEI----- 161 (268)
Q Consensus 97 ~~~~vv~lHG~~~~~~~~~~~~~~l~~---------~~~v~~~d~~G~G~s~~~-~~~~~~~~~~~~~~~~l~~~----- 161 (268)
++.+|||+||..++...++.+...+.+ .++++.+|+......-.. ......+...+.+..+++..
T Consensus 3 ~g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~~l~~q~~~~~~~i~~i~~~~~~~~~ 82 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHGRTLQRQAEFLAEAIKYILELYKSNRP 82 (225)
T ss_pred CCCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCccccccccccHHHHHHHHHHHHHHHHHhhhhccC
Confidence 468999999999998887777654421 277888888754221111 11111122223334444444
Q ss_pred cCCCeEEEEeChHHHHHHHHHHhCC---CccCeEEEecCCCC
Q 024392 162 VKEPAVLVGNSLGGFAALVAAVGLP---DQVTGVALLNSAGQ 200 (268)
Q Consensus 162 ~~~~~~lvG~S~Gg~~a~~~a~~~p---~~v~~lvl~~~~~~ 200 (268)
+.++++++||||||.++..+..... +.|+.+|.++++-.
T Consensus 83 ~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~ 124 (225)
T PF07819_consen 83 PPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHR 124 (225)
T ss_pred CCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCC
Confidence 4679999999999999988876543 47999999998643
No 84
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.08 E-value=7.1e-10 Score=95.55 Aligned_cols=114 Identities=24% Similarity=0.395 Sum_probs=96.1
Q ss_pred eeCCeEEEEEEcc-------C-CCcEEEECCCCCChhhHHHhHHHHHhc----------CeEEEEcCCCCCCCCccc-cc
Q 024392 84 TWRGHKIHYVVQG-------E-GSPVVLIHGFGASAFHWRYNIPELAKR----------YKVYAVDLLGFGWSEKAI-IE 144 (268)
Q Consensus 84 ~~~g~~~~~~~~g-------~-~~~vv~lHG~~~~~~~~~~~~~~l~~~----------~~v~~~d~~G~G~s~~~~-~~ 144 (268)
+++|.++||.... + -.|++++|||+|+-..+..+++.|.+. |.||++.+||||+|+.+. ..
T Consensus 130 eIeGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk~G 209 (469)
T KOG2565|consen 130 EIEGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSKTG 209 (469)
T ss_pred hhcceeEEEEEecCCccccCCcccceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCccCC
Confidence 6789999987542 1 138999999999999888888776432 789999999999999864 56
Q ss_pred CCHHHHHHHHHHHHHHhcCCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecC
Q 024392 145 YDAMVWKDQIVDFLKEIVKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNS 197 (268)
Q Consensus 145 ~~~~~~~~~~~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~ 197 (268)
.+..+.+.-+..++=.+|.++.++-|-.+|+.++..+|..+|++|.|+-+-.+
T Consensus 210 Fn~~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPenV~GlHlnm~ 262 (469)
T KOG2565|consen 210 FNAAATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPENVLGLHLNMC 262 (469)
T ss_pred ccHHHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcchhhhHhhhccc
Confidence 78888888888899899999999999999999999999999999988754444
No 85
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.06 E-value=3.5e-09 Score=92.57 Aligned_cols=118 Identities=25% Similarity=0.182 Sum_probs=73.1
Q ss_pred eEEeeCCeEEEEE---Ec---cCCCcEEEECCCCCChhhHHHhHHHHHhcCeEEEEcCCCCCC-CCccc-----------
Q 024392 81 NFWTWRGHKIHYV---VQ---GEGSPVVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGW-SEKAI----------- 142 (268)
Q Consensus 81 ~~~~~~g~~~~~~---~~---g~~~~vv~lHG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~-s~~~~----------- 142 (268)
.|...+|..++-+ .. ++-|.||.+||.++....|..........|.|+.+|.||.|. +....
T Consensus 60 ~f~s~~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~~~~~~~~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~ 139 (320)
T PF05448_consen 60 SFESFDGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSGDPFDLLPWAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHI 139 (320)
T ss_dssp EEEEGGGEEEEEEEEEES-SSSSEEEEEEE--TT--GGGHHHHHHHHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSST
T ss_pred EEEccCCCEEEEEEEecCCCCCCcCEEEEecCCCCCCCCcccccccccCCeEEEEecCCCCCCCCCCccccCCCCCccHH
Confidence 3445677777632 22 233689999999999877877666555559999999999983 21110
Q ss_pred --------ccCCHHHHHHHHHHHHHHh------cCCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCC
Q 024392 143 --------IEYDAMVWKDQIVDFLKEI------VKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAG 199 (268)
Q Consensus 143 --------~~~~~~~~~~~~~~~l~~~------~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 199 (268)
..+-......|....++.+ +.++|.+.|.|+||.+++.+|+.++ +|++++..-|..
T Consensus 140 ~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l 209 (320)
T PF05448_consen 140 TRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPFL 209 (320)
T ss_dssp TTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESESS
T ss_pred hcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCCCc
Confidence 0011223345555555543 3459999999999999999999887 699999888754
No 86
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.04 E-value=2e-09 Score=102.49 Aligned_cols=124 Identities=22% Similarity=0.211 Sum_probs=85.1
Q ss_pred CCCCCceEEeeCCeEEEEEEcc---C-----CCcEEEECCCCCChhh--HHHhHHHHHhc-CeEEEEcCCCCCCCCc---
Q 024392 75 FKPEGYNFWTWRGHKIHYVVQG---E-----GSPVVLIHGFGASAFH--WRYNIPELAKR-YKVYAVDLLGFGWSEK--- 140 (268)
Q Consensus 75 ~~~~~~~~~~~~g~~~~~~~~g---~-----~~~vv~lHG~~~~~~~--~~~~~~~l~~~-~~v~~~d~~G~G~s~~--- 140 (268)
..++.+.+...||.+++.+... . -|.||++||.+..... +....+.|+.. |.|+.+|+||.+.-..
T Consensus 363 ~~~e~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~ 442 (620)
T COG1506 363 AEPEPVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFA 442 (620)
T ss_pred CCceEEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHH
Confidence 3445566667789899866542 1 1689999999865543 55667778887 9999999997643211
Q ss_pred -----ccccCCHHHHHHHHHHHHHHhc---CCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCCC
Q 024392 141 -----AIIEYDAMVWKDQIVDFLKEIV---KEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQ 200 (268)
Q Consensus 141 -----~~~~~~~~~~~~~~~~~l~~~~---~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 200 (268)
.......++..+.+. ++...+ .+|+.++|||+||.+++..+.+.| ++++.+...+..+
T Consensus 443 ~~~~~~~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~ 508 (620)
T COG1506 443 DAIRGDWGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVD 508 (620)
T ss_pred HhhhhccCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcch
Confidence 112234444444444 443333 359999999999999999999988 6777776666543
No 87
>PRK10162 acetyl esterase; Provisional
Probab=99.04 E-value=2.5e-09 Score=93.72 Aligned_cols=102 Identities=18% Similarity=0.077 Sum_probs=71.1
Q ss_pred CCCcEEEECCCC---CChhhHHHhHHHHHhc--CeEEEEcCCCCCCCCcccccCCHHHH---HHHHHHHHHHhcC--CCe
Q 024392 97 EGSPVVLIHGFG---ASAFHWRYNIPELAKR--YKVYAVDLLGFGWSEKAIIEYDAMVW---KDQIVDFLKEIVK--EPA 166 (268)
Q Consensus 97 ~~~~vv~lHG~~---~~~~~~~~~~~~l~~~--~~v~~~d~~G~G~s~~~~~~~~~~~~---~~~~~~~l~~~~~--~~~ 166 (268)
..|+||++||.+ ++.+.|..+.+.|++. +.|+.+|+|.......+ ...++. .+.+.+..+.++. +++
T Consensus 80 ~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~~p---~~~~D~~~a~~~l~~~~~~~~~d~~~i 156 (318)
T PRK10162 80 SQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEARFP---QAIEEIVAVCCYFHQHAEDYGINMSRI 156 (318)
T ss_pred CCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCCCC---CcHHHHHHHHHHHHHhHHHhCCChhHE
Confidence 357899999977 5566788888888774 99999999965433222 122222 2222233334443 589
Q ss_pred EEEEeChHHHHHHHHHHhC------CCccCeEEEecCCCCC
Q 024392 167 VLVGNSLGGFAALVAAVGL------PDQVTGVALLNSAGQF 201 (268)
Q Consensus 167 ~lvG~S~Gg~~a~~~a~~~------p~~v~~lvl~~~~~~~ 201 (268)
+++|+|+||.+++.++... +.++++++++.|..+.
T Consensus 157 ~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~ 197 (318)
T PRK10162 157 GFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGL 197 (318)
T ss_pred EEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCC
Confidence 9999999999999988642 3578999999987654
No 88
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.01 E-value=1e-08 Score=84.31 Aligned_cols=104 Identities=20% Similarity=0.173 Sum_probs=86.0
Q ss_pred CCCcEEEECCCCCChhhHHHhHHHHHhcCeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHH-HhcCCCeEEEEeChHH
Q 024392 97 EGSPVVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLK-EIVKEPAVLVGNSLGG 175 (268)
Q Consensus 97 ~~~~vv~lHG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~lvG~S~Gg 175 (268)
...-++++|=.|++...|.+|...|...+.++.+++||+|.--..+...+++++++.+...+. ....+++.+.||||||
T Consensus 6 ~~~~L~cfP~AGGsa~~fr~W~~~lp~~iel~avqlPGR~~r~~ep~~~di~~Lad~la~el~~~~~d~P~alfGHSmGa 85 (244)
T COG3208 6 ARLRLFCFPHAGGSASLFRSWSRRLPADIELLAVQLPGRGDRFGEPLLTDIESLADELANELLPPLLDAPFALFGHSMGA 85 (244)
T ss_pred CCceEEEecCCCCCHHHHHHHHhhCCchhheeeecCCCcccccCCcccccHHHHHHHHHHHhccccCCCCeeecccchhH
Confidence 345789999999999999999999888899999999999987776777889999999888887 4445689999999999
Q ss_pred HHHHHHHHhCC---CccCeEEEecCCCC
Q 024392 176 FAALVAAVGLP---DQVTGVALLNSAGQ 200 (268)
Q Consensus 176 ~~a~~~a~~~p---~~v~~lvl~~~~~~ 200 (268)
++|.++|.+.. ..+.++.+.++...
T Consensus 86 ~lAfEvArrl~~~g~~p~~lfisg~~aP 113 (244)
T COG3208 86 MLAFEVARRLERAGLPPRALFISGCRAP 113 (244)
T ss_pred HHHHHHHHHHHHcCCCcceEEEecCCCC
Confidence 99999997632 12677777776554
No 89
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=98.98 E-value=4.2e-09 Score=108.26 Aligned_cols=102 Identities=20% Similarity=0.166 Sum_probs=89.0
Q ss_pred cCCCcEEEECCCCCChhhHHHhHHHHHhcCeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHHhcC-CCeEEEEeChH
Q 024392 96 GEGSPVVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVK-EPAVLVGNSLG 174 (268)
Q Consensus 96 g~~~~vv~lHG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~lvG~S~G 174 (268)
+++++++++||++++...|..+.+.|..++.|+.+|.+|+|.+. ...++.+++++++.+.++.+.. .+++++|||+|
T Consensus 1066 ~~~~~l~~lh~~~g~~~~~~~l~~~l~~~~~v~~~~~~g~~~~~--~~~~~l~~la~~~~~~i~~~~~~~p~~l~G~S~G 1143 (1296)
T PRK10252 1066 GDGPTLFCFHPASGFAWQFSVLSRYLDPQWSIYGIQSPRPDGPM--QTATSLDEVCEAHLATLLEQQPHGPYHLLGYSLG 1143 (1296)
T ss_pred CCCCCeEEecCCCCchHHHHHHHHhcCCCCcEEEEECCCCCCCC--CCCCCHHHHHHHHHHHHHhhCCCCCEEEEEechh
Confidence 45689999999999999999999999888999999999998653 3457999999999999988764 48999999999
Q ss_pred HHHHHHHHHh---CCCccCeEEEecCCC
Q 024392 175 GFAALVAAVG---LPDQVTGVALLNSAG 199 (268)
Q Consensus 175 g~~a~~~a~~---~p~~v~~lvl~~~~~ 199 (268)
|.++.++|.+ .++++..++++++..
T Consensus 1144 g~vA~e~A~~l~~~~~~v~~l~l~~~~~ 1171 (1296)
T PRK10252 1144 GTLAQGIAARLRARGEEVAFLGLLDTWP 1171 (1296)
T ss_pred hHHHHHHHHHHHHcCCceeEEEEecCCC
Confidence 9999999985 578899999998754
No 90
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.98 E-value=2.9e-08 Score=91.53 Aligned_cols=104 Identities=12% Similarity=0.115 Sum_probs=83.1
Q ss_pred CCcEEEECCCCCChhhH-----HHhHHHHHhc-CeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHHh----cCCCeE
Q 024392 98 GSPVVLIHGFGASAFHW-----RYNIPELAKR-YKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEI----VKEPAV 167 (268)
Q Consensus 98 ~~~vv~lHG~~~~~~~~-----~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~ 167 (268)
++|||+++.+-...+.+ ..++++|.++ |.|+.+|++.-+..+ ...+++++++.+.+.++.+ |.+++.
T Consensus 215 ~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~---r~~~ldDYv~~i~~Ald~V~~~tG~~~vn 291 (560)
T TIGR01839 215 ARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAH---REWGLSTYVDALKEAVDAVRAITGSRDLN 291 (560)
T ss_pred CCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhh---cCCCHHHHHHHHHHHHHHHHHhcCCCCee
Confidence 46999999988555544 4678888888 999999999766553 3467788877766666554 678999
Q ss_pred EEEeChHHHHHHH----HHHhCCC-ccCeEEEecCCCCCCCC
Q 024392 168 LVGNSLGGFAALV----AAVGLPD-QVTGVALLNSAGQFGDG 204 (268)
Q Consensus 168 lvG~S~Gg~~a~~----~a~~~p~-~v~~lvl~~~~~~~~~~ 204 (268)
++|||+||.++.. +++++++ +|+.++++.+..++...
T Consensus 292 l~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~~~ 333 (560)
T TIGR01839 292 LLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDSTME 333 (560)
T ss_pred EEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccCCC
Confidence 9999999999986 7888886 79999999998887653
No 91
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=98.96 E-value=3.2e-09 Score=94.31 Aligned_cols=101 Identities=22% Similarity=0.199 Sum_probs=68.1
Q ss_pred CcEEEECCCCCChhhHHHh-HHHHHhc-CeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHHh---cCCCeEEEEeCh
Q 024392 99 SPVVLIHGFGASAFHWRYN-IPELAKR-YKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEI---VKEPAVLVGNSL 173 (268)
Q Consensus 99 ~~vv~lHG~~~~~~~~~~~-~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~lvG~S~ 173 (268)
|+||++-|+-+-.+++..+ .+.+..+ +.++++|.||.|.|...+...+.+...+.+.+.+... +.++|.++|.|+
T Consensus 191 P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~~D~~~l~~aVLd~L~~~p~VD~~RV~~~G~Sf 270 (411)
T PF06500_consen 191 PTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLTQDSSRLHQAVLDYLASRPWVDHTRVGAWGFSF 270 (411)
T ss_dssp EEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S-S-CCHHHHHHHHHHHHSTTEEEEEEEEEEETH
T ss_pred CEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCCcCHHHHHHHHHHHHhcCCccChhheEEEEecc
Confidence 5677777777777665444 4567766 9999999999999865443344444556666666554 346999999999
Q ss_pred HHHHHHHHHHhCCCccCeEEEecCCC
Q 024392 174 GGFAALVAAVGLPDQVTGVALLNSAG 199 (268)
Q Consensus 174 Gg~~a~~~a~~~p~~v~~lvl~~~~~ 199 (268)
||++|.++|..+++|++++|.+++..
T Consensus 271 GGy~AvRlA~le~~RlkavV~~Ga~v 296 (411)
T PF06500_consen 271 GGYYAVRLAALEDPRLKAVVALGAPV 296 (411)
T ss_dssp HHHHHHHHHHHTTTT-SEEEEES---
T ss_pred chHHHHHHHHhcccceeeEeeeCchH
Confidence 99999999999999999999999974
No 92
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.95 E-value=9.1e-09 Score=86.66 Aligned_cols=100 Identities=24% Similarity=0.300 Sum_probs=86.7
Q ss_pred CcEEEECCCCCChhhHHHhHHHHHhcCeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHHhcC-CCeEEEEeChHHHH
Q 024392 99 SPVVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVK-EPAVLVGNSLGGFA 177 (268)
Q Consensus 99 ~~vv~lHG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~lvG~S~Gg~~ 177 (268)
|+++++|+.+|....|..+...+.+...|+.++.+|+|.- .....+.+++++...+.|..... .+++|.|||+||.+
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~~~v~~l~a~g~~~~--~~~~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~S~GG~v 78 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPLLPVYGLQAPGYGAG--EQPFASLDDMAAAYVAAIRRVQPEGPYVLLGWSLGGAV 78 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccCceeeccccCccccc--ccccCCHHHHHHHHHHHHHHhCCCCCEEEEeeccccHH
Confidence 5899999999999999999999999999999999999752 23356889999998888888765 49999999999999
Q ss_pred HHHHHHhC---CCccCeEEEecCCCC
Q 024392 178 ALVAAVGL---PDQVTGVALLNSAGQ 200 (268)
Q Consensus 178 a~~~a~~~---p~~v~~lvl~~~~~~ 200 (268)
|+..|.+. .+.|.-++++++.+.
T Consensus 79 A~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 79 AFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred HHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 99999763 457999999999876
No 93
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.93 E-value=4e-08 Score=82.78 Aligned_cols=117 Identities=22% Similarity=0.177 Sum_probs=78.6
Q ss_pred EeeCCeEEEEEEc---c---CCCcEEEECCCCCChhhHHHhH--HHHHhc--CeEEEEcCCCCCC-------CCcccccC
Q 024392 83 WTWRGHKIHYVVQ---G---EGSPVVLIHGFGASAFHWRYNI--PELAKR--YKVYAVDLLGFGW-------SEKAIIEY 145 (268)
Q Consensus 83 ~~~~g~~~~~~~~---g---~~~~vv~lHG~~~~~~~~~~~~--~~l~~~--~~v~~~d~~G~G~-------s~~~~~~~ 145 (268)
+..+|.+.+|+.+ + +.|.||++||..++...+.... +.|+++ |-|+.+|....-+ +..+....
T Consensus 40 ~~~~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~~ 119 (312)
T COG3509 40 FDVNGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPADRR 119 (312)
T ss_pred cccCCCccceEEEcCCCCCCCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCccccccCCCcccccCCccccc
Confidence 3667777776543 2 3468999999999998776653 667666 8999996433222 11111101
Q ss_pred CHHHHHHHHHHH----HHHhcCC--CeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCC
Q 024392 146 DAMVWKDQIVDF----LKEIVKE--PAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAG 199 (268)
Q Consensus 146 ~~~~~~~~~~~~----l~~~~~~--~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 199 (268)
.-.+.+..+.++ +.+.+++ +|++.|.|-||.++..++..+|+.+.++..+++..
T Consensus 120 ~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 120 RGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred CCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 111123334444 4444555 99999999999999999999999999999888865
No 94
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=98.90 E-value=1.7e-08 Score=81.20 Aligned_cols=107 Identities=22% Similarity=0.250 Sum_probs=84.5
Q ss_pred ccCCCcEEEECCCCCChh--hHHHhHHHHHhc-CeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHHhcC-CCe--EE
Q 024392 95 QGEGSPVVLIHGFGASAF--HWRYNIPELAKR-YKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVK-EPA--VL 168 (268)
Q Consensus 95 ~g~~~~vv~lHG~~~~~~--~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~~~-~~~--~l 168 (268)
.|+...+|++||+-.++. ....++..|.+. +.++.+|++|.|.|.+.-..-.....++|+..+++++.. .++ ++
T Consensus 30 tgs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~Gn~~~eadDL~sV~q~~s~~nr~v~vi 109 (269)
T KOG4667|consen 30 TGSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYGNYNTEADDLHSVIQYFSNSNRVVPVI 109 (269)
T ss_pred cCCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccccCcccchHHHHHHHHHHhccCceEEEEE
Confidence 456678999999998875 345667888888 999999999999998864333444456999999998743 332 68
Q ss_pred EEeChHHHHHHHHHHhCCCccCeEEEecCCCCCC
Q 024392 169 VGNSLGGFAALVAAVGLPDQVTGVALLNSAGQFG 202 (268)
Q Consensus 169 vG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~ 202 (268)
+|||-||.+++.++.++++ +.-+|-+++-.+..
T Consensus 110 ~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~ 142 (269)
T KOG4667|consen 110 LGHSKGGDVVLLYASKYHD-IRNVINCSGRYDLK 142 (269)
T ss_pred EeecCccHHHHHHHHhhcC-chheEEcccccchh
Confidence 9999999999999999987 78888777765443
No 95
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.90 E-value=8.4e-09 Score=86.51 Aligned_cols=100 Identities=25% Similarity=0.383 Sum_probs=73.0
Q ss_pred cCCCcEEEECCCCCChhhHHHhHHHHHhc-CeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHH-----h------cC
Q 024392 96 GEGSPVVLIHGFGASAFHWRYNIPELAKR-YKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKE-----I------VK 163 (268)
Q Consensus 96 g~~~~vv~lHG~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~-----~------~~ 163 (268)
|.-|+|||+||+......|..+.+.++.. |.|+.+|+...+..... ..-+...++.+++.. + +.
T Consensus 15 g~yPVv~f~~G~~~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~~~~~----~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~ 90 (259)
T PF12740_consen 15 GTYPVVLFLHGFLLINSWYSQLLEHVASHGYIVVAPDLYSIGGPDDT----DEVASAAEVIDWLAKGLESKLPLGVKPDF 90 (259)
T ss_pred CCcCEEEEeCCcCCCHHHHHHHHHHHHhCceEEEEecccccCCCCcc----hhHHHHHHHHHHHHhcchhhccccccccc
Confidence 45589999999997777888999999999 99999997654332111 111112222222211 1 34
Q ss_pred CCeEEEEeChHHHHHHHHHHhC-----CCccCeEEEecCCC
Q 024392 164 EPAVLVGNSLGGFAALVAAVGL-----PDQVTGVALLNSAG 199 (268)
Q Consensus 164 ~~~~lvG~S~Gg~~a~~~a~~~-----p~~v~~lvl~~~~~ 199 (268)
+++.|.|||-||-++..++..+ +.+++++++++|.-
T Consensus 91 s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 91 SKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred cceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 5899999999999999999887 56899999999976
No 96
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.86 E-value=5e-09 Score=86.34 Aligned_cols=99 Identities=28% Similarity=0.257 Sum_probs=59.7
Q ss_pred CcEEEECCCCCC-hhhHHHhHHHHHhc-Ce---EEEEcCCCCCCCCccc-c---cCCHHHHHHHHHHHHHHhcCCCeEEE
Q 024392 99 SPVVLIHGFGAS-AFHWRYNIPELAKR-YK---VYAVDLLGFGWSEKAI-I---EYDAMVWKDQIVDFLKEIVKEPAVLV 169 (268)
Q Consensus 99 ~~vv~lHG~~~~-~~~~~~~~~~l~~~-~~---v~~~d~~G~G~s~~~~-~---~~~~~~~~~~~~~~l~~~~~~~~~lv 169 (268)
.||||+||..++ ...|..+.+.|.++ |. ++++++-......... . ..+..++.+.+.++++..|. +|.||
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa-kVDIV 80 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA-KVDIV 80 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT---EEEE
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC-EEEEE
Confidence 489999999994 46899999999888 88 8999985433212111 1 11224455566666677788 99999
Q ss_pred EeChHHHHHHHHHHhCC-------------CccCeEEEecCC
Q 024392 170 GNSLGGFAALVAAVGLP-------------DQVTGVALLNSA 198 (268)
Q Consensus 170 G~S~Gg~~a~~~a~~~p-------------~~v~~lvl~~~~ 198 (268)
||||||.++..+..... .++..+|.++++
T Consensus 81 gHS~G~~iaR~yi~~~~~~d~~~~lg~~~~~~v~t~v~lag~ 122 (219)
T PF01674_consen 81 GHSMGGTIARYYIKGGGGADKVVNLGPPLTSKVGTFVGLAGA 122 (219)
T ss_dssp EETCHHHHHHHHHHHCTGGGTEEE----GGG-EEEEEEES--
T ss_pred EcCCcCHHHHHHHHHcCCCCcccCcccccccccccccccccc
Confidence 99999999999886432 346666666643
No 97
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=98.85 E-value=2.1e-08 Score=82.97 Aligned_cols=105 Identities=21% Similarity=0.185 Sum_probs=61.2
Q ss_pred CCCcEEEECCCCCChhhHHHhHHH-HHhc-CeEEEEcCCC------CCC---C--Ccc---c-ccCCH---HHHHHHHHH
Q 024392 97 EGSPVVLIHGFGASAFHWRYNIPE-LAKR-YKVYAVDLLG------FGW---S--EKA---I-IEYDA---MVWKDQIVD 156 (268)
Q Consensus 97 ~~~~vv~lHG~~~~~~~~~~~~~~-l~~~-~~v~~~d~~G------~G~---s--~~~---~-~~~~~---~~~~~~~~~ 156 (268)
..+.||++||+|++.+.|...... +... ..++.++-+. .|. + +.. . ...+. .+..+.+.+
T Consensus 13 ~~~lvi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~l~~ 92 (216)
T PF02230_consen 13 AKPLVILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAERLDE 92 (216)
T ss_dssp -SEEEEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHHHHH
T ss_pred CceEEEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHHHHH
Confidence 457899999999999777665552 2222 6666665431 122 1 110 0 11122 223334445
Q ss_pred HHHHh-----cCCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCCCC
Q 024392 157 FLKEI-----VKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQF 201 (268)
Q Consensus 157 ~l~~~-----~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 201 (268)
+++.. ..+++++.|+|+||++++.++.++|+.++++|.+++....
T Consensus 93 li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~ 142 (216)
T PF02230_consen 93 LIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPP 142 (216)
T ss_dssp HHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TT
T ss_pred HHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccc
Confidence 55432 3458999999999999999999999999999999997644
No 98
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=98.84 E-value=1.4e-08 Score=80.87 Aligned_cols=89 Identities=28% Similarity=0.443 Sum_probs=63.0
Q ss_pred EEEECCCCCChh-hHHHhHH-HHHhcCeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHHhcCCCeEEEEeChHHHHH
Q 024392 101 VVLIHGFGASAF-HWRYNIP-ELAKRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVKEPAVLVGNSLGGFAA 178 (268)
Q Consensus 101 vv~lHG~~~~~~-~~~~~~~-~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~lvG~S~Gg~~a 178 (268)
|+++||++++.. .|..+.+ .+.+.++|-.+|+ ...+.++|.+.+.+.+.... +++++||||+|+..+
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~~~V~~~~~----------~~P~~~~W~~~l~~~i~~~~-~~~ilVaHSLGc~~~ 69 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENSVRVEQPDW----------DNPDLDEWVQALDQAIDAID-EPTILVAHSLGCLTA 69 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTSEEEEEC------------TS--HHHHHHHHHHCCHC-T-TTEEEEEETHHHHHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCCeEEecccc----------CCCCHHHHHHHHHHHHhhcC-CCeEEEEeCHHHHHH
Confidence 689999999874 6776654 4555567776665 13367778888887777653 579999999999999
Q ss_pred HHHH-HhCCCccCeEEEecCCCC
Q 024392 179 LVAA-VGLPDQVTGVALLNSAGQ 200 (268)
Q Consensus 179 ~~~a-~~~p~~v~~lvl~~~~~~ 200 (268)
++++ .....+|+|+++++|+-.
T Consensus 70 l~~l~~~~~~~v~g~lLVAp~~~ 92 (171)
T PF06821_consen 70 LRWLAEQSQKKVAGALLVAPFDP 92 (171)
T ss_dssp HHHHHHTCCSSEEEEEEES--SC
T ss_pred HHHHhhcccccccEEEEEcCCCc
Confidence 9999 778889999999999753
No 99
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=98.84 E-value=5.4e-08 Score=83.10 Aligned_cols=103 Identities=21% Similarity=0.293 Sum_probs=85.1
Q ss_pred CcEEEECCCCCChhhHHHhHHHHHh----cCeEEEEcCCCCCCCCcc------cccCCHHHHHHHHHHHHHHhc------
Q 024392 99 SPVVLIHGFGASAFHWRYNIPELAK----RYKVYAVDLLGFGWSEKA------IIEYDAMVWKDQIVDFLKEIV------ 162 (268)
Q Consensus 99 ~~vv~lHG~~~~~~~~~~~~~~l~~----~~~v~~~d~~G~G~s~~~------~~~~~~~~~~~~~~~~l~~~~------ 162 (268)
..+|+++|.+|-.+.|..+.+.|.+ ++.|+++.+.||-.++.. ...++.++.++-..++++++-
T Consensus 3 ~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~~ 82 (266)
T PF10230_consen 3 PLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNKP 82 (266)
T ss_pred EEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcCC
Confidence 4689999999999999998887763 399999999999766553 246788888887777776542
Q ss_pred CCCeEEEEeChHHHHHHHHHHhCC---CccCeEEEecCCCCC
Q 024392 163 KEPAVLVGNSLGGFAALVAAVGLP---DQVTGVALLNSAGQF 201 (268)
Q Consensus 163 ~~~~~lvG~S~Gg~~a~~~a~~~p---~~v~~lvl~~~~~~~ 201 (268)
..+++++|||.|++++++...+.+ .+|.+++++-|....
T Consensus 83 ~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~ 124 (266)
T PF10230_consen 83 NVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIED 124 (266)
T ss_pred CCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcccc
Confidence 348999999999999999999999 789999999997643
No 100
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=98.81 E-value=6.2e-08 Score=80.01 Aligned_cols=104 Identities=22% Similarity=0.167 Sum_probs=68.9
Q ss_pred CCCcEEEECCCCCChhhHHHh--HHHHHhc--CeEEEEcCCCCCCCCcc--------c-ccCCHHHHHHHHHHHHHHh--
Q 024392 97 EGSPVVLIHGFGASAFHWRYN--IPELAKR--YKVYAVDLLGFGWSEKA--------I-IEYDAMVWKDQIVDFLKEI-- 161 (268)
Q Consensus 97 ~~~~vv~lHG~~~~~~~~~~~--~~~l~~~--~~v~~~d~~G~G~s~~~--------~-~~~~~~~~~~~~~~~l~~~-- 161 (268)
+.|.||++||.+++.+.+... +..++++ |-|+.++.......... . ...+...+.+-+..+.++.
T Consensus 15 ~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~~i 94 (220)
T PF10503_consen 15 PVPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARYNI 94 (220)
T ss_pred CCCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhccc
Confidence 347899999999999876543 4557766 77888886432111110 0 0111111222233333333
Q ss_pred cCCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCCC
Q 024392 162 VKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQ 200 (268)
Q Consensus 162 ~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 200 (268)
+.+||++.|+|.||+++..++..+|+.++++...++.+.
T Consensus 95 D~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~ 133 (220)
T PF10503_consen 95 DPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPY 133 (220)
T ss_pred CCCceeeEEECHHHHHHHHHHHhCCccceEEEeeccccc
Confidence 356999999999999999999999999999998888653
No 101
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.81 E-value=1.3e-08 Score=84.60 Aligned_cols=117 Identities=26% Similarity=0.261 Sum_probs=82.9
Q ss_pred EEeeCCeEEEEEEc------cCCCcEEEECCCCCChhhHHHhHHHHHhcCeEEEEcCCCCCCCCc----cccc-------
Q 024392 82 FWTWRGHKIHYVVQ------GEGSPVVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGWSEK----AIIE------- 144 (268)
Q Consensus 82 ~~~~~g~~~~~~~~------g~~~~vv~lHG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~----~~~~------- 144 (268)
|...+|.+|+-+.. ++-|.||-.||.+++...|..+...-...|.|+..|.||.|.|.. .+..
T Consensus 61 f~g~~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g~~~~~l~wa~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~m 140 (321)
T COG3458 61 FTGYGGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGGEWHDMLHWAVAGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFM 140 (321)
T ss_pred EeccCCceEEEEEEeecccCCccceEEEEeeccCCCCCccccccccccceeEEEEecccCCCccccCCCCCCCCcCCcee
Confidence 44556777764421 345789999999999988887777666679999999999987732 1111
Q ss_pred ----------CCHHHHHHHHHHHHH------HhcCCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCC
Q 024392 145 ----------YDAMVWKDQIVDFLK------EIVKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAG 199 (268)
Q Consensus 145 ----------~~~~~~~~~~~~~l~------~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 199 (268)
+-......|+..+++ +.+.++|.+.|.|+||.+++..+...| ++++++..-|..
T Consensus 141 trGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~Pfl 210 (321)
T COG3458 141 TRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVADYPFL 210 (321)
T ss_pred EeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhccccccccc
Confidence 001122334444433 335679999999999999999988887 799988777753
No 102
>PRK10115 protease 2; Provisional
Probab=98.80 E-value=4.8e-08 Score=93.90 Aligned_cols=126 Identities=18% Similarity=0.103 Sum_probs=88.7
Q ss_pred CCCceEEeeCCeEEEEE-E-------ccCCCcEEEECCCCCChh--hHHHhHHHHHhc-CeEEEEcCCCCCCCCcc----
Q 024392 77 PEGYNFWTWRGHKIHYV-V-------QGEGSPVVLIHGFGASAF--HWRYNIPELAKR-YKVYAVDLLGFGWSEKA---- 141 (268)
Q Consensus 77 ~~~~~~~~~~g~~~~~~-~-------~g~~~~vv~lHG~~~~~~--~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~---- 141 (268)
.+...+...||.++++. . .++.|.||++||..+... .|......|.++ |.|+.++.||-|.-...
T Consensus 416 ~e~v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~~ 495 (686)
T PRK10115 416 SEHLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYED 495 (686)
T ss_pred EEEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHHh
Confidence 33444567789998852 2 134588999999877664 455555566666 99999999997654432
Q ss_pred ----cccCCHHHHHHHHHHHHHH--hcCCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCCCCC
Q 024392 142 ----IIEYDAMVWKDQIVDFLKE--IVKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQFG 202 (268)
Q Consensus 142 ----~~~~~~~~~~~~~~~~l~~--~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~ 202 (268)
....+.+|+.+.+..++++ ...+++.++|.|.||.++...+.++|++++++|...|..+..
T Consensus 496 g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~~ 562 (686)
T PRK10115 496 GKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVV 562 (686)
T ss_pred hhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhHh
Confidence 1223454444444444433 135699999999999999999999999999999999876644
No 103
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=98.80 E-value=5e-07 Score=80.93 Aligned_cols=104 Identities=13% Similarity=0.179 Sum_probs=84.1
Q ss_pred CcEEEECCCCCChhhH-HHhHHHHHhcCeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHHhcCCCeEEEEeChHHHH
Q 024392 99 SPVVLIHGFGASAFHW-RYNIPELAKRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVKEPAVLVGNSLGGFA 177 (268)
Q Consensus 99 ~~vv~lHG~~~~~~~~-~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~lvG~S~Gg~~ 177 (268)
|+||++.-+.+..... +.+++.|-+.+.|+..|+.--+.........+.+++++-+.+.++++|.+ ++++|+|+||..
T Consensus 103 ~pvLiV~Pl~g~~~~L~RS~V~~Ll~g~dVYl~DW~~p~~vp~~~~~f~ldDYi~~l~~~i~~~G~~-v~l~GvCqgG~~ 181 (406)
T TIGR01849 103 PAVLIVAPMSGHYATLLRSTVEALLPDHDVYITDWVNARMVPLSAGKFDLEDYIDYLIEFIRFLGPD-IHVIAVCQPAVP 181 (406)
T ss_pred CcEEEEcCCchHHHHHHHHHHHHHhCCCcEEEEeCCCCCCCchhcCCCCHHHHHHHHHHHHHHhCCC-CcEEEEchhhHH
Confidence 6999999888666533 56777777799999999986665544446789999999899999999877 999999999999
Q ss_pred HHHHHHh-----CCCccCeEEEecCCCCCCC
Q 024392 178 ALVAAVG-----LPDQVTGVALLNSAGQFGD 203 (268)
Q Consensus 178 a~~~a~~-----~p~~v~~lvl~~~~~~~~~ 203 (268)
++.+++. +|++++.+++++++.++..
T Consensus 182 ~laa~Al~a~~~~p~~~~sltlm~~PID~~~ 212 (406)
T TIGR01849 182 VLAAVALMAENEPPAQPRSMTLMGGPIDARA 212 (406)
T ss_pred HHHHHHHHHhcCCCCCcceEEEEecCccCCC
Confidence 7766554 3678999999999888764
No 104
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.76 E-value=1.9e-08 Score=88.28 Aligned_cols=107 Identities=26% Similarity=0.312 Sum_probs=64.8
Q ss_pred CCCcEEEECCCCCCh--hhHHH-hHHH-HHh--c-CeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHH----h--cC
Q 024392 97 EGSPVVLIHGFGASA--FHWRY-NIPE-LAK--R-YKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKE----I--VK 163 (268)
Q Consensus 97 ~~~~vv~lHG~~~~~--~~~~~-~~~~-l~~--~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~----~--~~ 163 (268)
+.|++|++|||.++. +.|.. +.+. +.+ + ++|+++|+...................+.+..+++. . ..
T Consensus 70 ~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y~~a~~n~~~vg~~la~~l~~L~~~~g~~~ 149 (331)
T PF00151_consen 70 SKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNYPQAVANTRLVGRQLAKFLSFLINNFGVPP 149 (331)
T ss_dssp TSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHH---G
T ss_pred CCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccccccchhhhHHHHHHHHHHHHHHHHhhcCCCh
Confidence 468999999999988 35544 4443 455 4 999999996432211111111222223333333333 2 35
Q ss_pred CCeEEEEeChHHHHHHHHHHhCCC--ccCeEEEecCCCCCCC
Q 024392 164 EPAVLVGNSLGGFAALVAAVGLPD--QVTGVALLNSAGQFGD 203 (268)
Q Consensus 164 ~~~~lvG~S~Gg~~a~~~a~~~p~--~v~~lvl~~~~~~~~~ 203 (268)
++++|+|||+||++|-.++..... +|..++.++|++..-.
T Consensus 150 ~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~F~ 191 (331)
T PF00151_consen 150 ENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPLFE 191 (331)
T ss_dssp GGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TTTT
T ss_pred hHEEEEeeccchhhhhhhhhhccCcceeeEEEecCccccccc
Confidence 699999999999999999988877 8999999999886543
No 105
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=98.76 E-value=8.4e-08 Score=82.23 Aligned_cols=105 Identities=19% Similarity=0.160 Sum_probs=73.2
Q ss_pred CCcEEEECCCCCChh---hHHHh-H------HHHHhc-CeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHHhc----
Q 024392 98 GSPVVLIHGFGASAF---HWRYN-I------PELAKR-YKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIV---- 162 (268)
Q Consensus 98 ~~~vv~lHG~~~~~~---~~~~~-~------~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~~---- 162 (268)
-|+||..|+++.+.. ..... . ..+.++ |.|+..|.||.|.|.+..... .....+|..++|+++.
T Consensus 20 ~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~-~~~e~~D~~d~I~W~~~Qpw 98 (272)
T PF02129_consen 20 FPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPM-SPNEAQDGYDTIEWIAAQPW 98 (272)
T ss_dssp EEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TT-SHHHHHHHHHHHHHHHHCTT
T ss_pred ccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccC-ChhHHHHHHHHHHHHHhCCC
Confidence 367888999886531 11111 1 126666 999999999999999875333 4445777777777763
Q ss_pred -CCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCCCCCC
Q 024392 163 -KEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQFGD 203 (268)
Q Consensus 163 -~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~ 203 (268)
..+|.++|.|++|..++.+|...|..+++++...+..+...
T Consensus 99 s~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 99 SNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDLYR 140 (272)
T ss_dssp EEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBTCC
T ss_pred CCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcccc
Confidence 23899999999999999999988889999999988776655
No 106
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=98.75 E-value=9e-08 Score=77.20 Aligned_cols=87 Identities=26% Similarity=0.315 Sum_probs=66.3
Q ss_pred EEEECCCCCChhhHHH--hHHHHHhc---CeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHHhcCCCeEEEEeChHH
Q 024392 101 VVLIHGFGASAFHWRY--NIPELAKR---YKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVKEPAVLVGNSLGG 175 (268)
Q Consensus 101 vv~lHG~~~~~~~~~~--~~~~l~~~---~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~lvG~S~Gg 175 (268)
|+++||+.++..+... +.+.+++. ..+..+|++ ....+..+.+.+++++...+.+.|+|.||||
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~-----------~~p~~a~~~l~~~i~~~~~~~~~liGSSlGG 70 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLP-----------PFPEEAIAQLEQLIEELKPENVVLIGSSLGG 70 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCC-----------cCHHHHHHHHHHHHHhCCCCCeEEEEEChHH
Confidence 7999999998876543 34556554 456666655 3455666788888888877789999999999
Q ss_pred HHHHHHHHhCCCccCeEEEecCCCCC
Q 024392 176 FAALVAAVGLPDQVTGVALLNSAGQF 201 (268)
Q Consensus 176 ~~a~~~a~~~p~~v~~lvl~~~~~~~ 201 (268)
..|.+++.+++ +.+ |+++|+..+
T Consensus 71 ~~A~~La~~~~--~~a-vLiNPav~p 93 (187)
T PF05728_consen 71 FYATYLAERYG--LPA-VLINPAVRP 93 (187)
T ss_pred HHHHHHHHHhC--CCE-EEEcCCCCH
Confidence 99999999986 444 889998653
No 107
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=98.74 E-value=2.7e-08 Score=82.00 Aligned_cols=89 Identities=22% Similarity=0.268 Sum_probs=63.0
Q ss_pred HHHhHHHHHhc-CeEEEEcCCCCCCCCccc----ccCCHHHHHHHHHHHHHHh------cCCCeEEEEeChHHHHHHHHH
Q 024392 114 WRYNIPELAKR-YKVYAVDLLGFGWSEKAI----IEYDAMVWKDQIVDFLKEI------VKEPAVLVGNSLGGFAALVAA 182 (268)
Q Consensus 114 ~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~----~~~~~~~~~~~~~~~l~~~------~~~~~~lvG~S~Gg~~a~~~a 182 (268)
|......|+++ |.|+.+|+||.+...... ....-....+|+.+.++.+ +.+++.++|||+||.+++.++
T Consensus 3 f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~ 82 (213)
T PF00326_consen 3 FNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAA 82 (213)
T ss_dssp -SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHH
T ss_pred eeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhh
Confidence 34556778777 999999999987543321 1112233456666666655 346999999999999999999
Q ss_pred HhCCCccCeEEEecCCCCCC
Q 024392 183 VGLPDQVTGVALLNSAGQFG 202 (268)
Q Consensus 183 ~~~p~~v~~lvl~~~~~~~~ 202 (268)
.++|++++++|..++..+..
T Consensus 83 ~~~~~~f~a~v~~~g~~d~~ 102 (213)
T PF00326_consen 83 TQHPDRFKAAVAGAGVSDLF 102 (213)
T ss_dssp HHTCCGSSEEEEESE-SSTT
T ss_pred cccceeeeeeeccceecchh
Confidence 99999999999999876543
No 108
>COG0400 Predicted esterase [General function prediction only]
Probab=98.71 E-value=7.7e-08 Score=78.68 Aligned_cols=106 Identities=16% Similarity=0.176 Sum_probs=72.6
Q ss_pred CCcEEEECCCCCChhhHHHhHHHHHhcCeEEEEcCCCC--C----CCCcccccCCHHH-------HHHHHHHHHHHhcC-
Q 024392 98 GSPVVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGF--G----WSEKAIIEYDAMV-------WKDQIVDFLKEIVK- 163 (268)
Q Consensus 98 ~~~vv~lHG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~--G----~s~~~~~~~~~~~-------~~~~~~~~l~~~~~- 163 (268)
.|.||++||+|++..++.++.+.+..++.++.+.-+-- | .+......++.++ +++.+..+.++.+.
T Consensus 18 ~~~iilLHG~Ggde~~~~~~~~~~~P~~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~~~gi~ 97 (207)
T COG0400 18 APLLILLHGLGGDELDLVPLPELILPNATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAEEYGID 97 (207)
T ss_pred CcEEEEEecCCCChhhhhhhhhhcCCCCeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHHHhCCC
Confidence 45799999999999888886666665566665532210 1 0000111223333 33344444555565
Q ss_pred -CCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCCCCCC
Q 024392 164 -EPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQFGD 203 (268)
Q Consensus 164 -~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~ 203 (268)
++++++|+|.|+++++.+..++|+.++++|+.++...+..
T Consensus 98 ~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~ 138 (207)
T COG0400 98 SSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEP 138 (207)
T ss_pred hhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCC
Confidence 6999999999999999999999999999999999876554
No 109
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.70 E-value=1.2e-07 Score=86.05 Aligned_cols=91 Identities=15% Similarity=0.120 Sum_probs=67.5
Q ss_pred CChhhHHHhHHHHHhcCeEEEEcCCCCCCCCcccc--cCCHHHHHHHHHHHHHHhcCCCeEEEEeChHHHHHHHHHHhCC
Q 024392 109 ASAFHWRYNIPELAKRYKVYAVDLLGFGWSEKAII--EYDAMVWKDQIVDFLKEIVKEPAVLVGNSLGGFAALVAAVGLP 186 (268)
Q Consensus 109 ~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p 186 (268)
.....|..+++.|.+...+...|++|+|.+.+... ....+++.+.+.++.+..+.++++|+||||||.++..++..+|
T Consensus 105 ~~~~~~~~li~~L~~~GY~~~~dL~g~gYDwR~~~~~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~p 184 (440)
T PLN02733 105 DEVYYFHDMIEQLIKWGYKEGKTLFGFGYDFRQSNRLPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLHS 184 (440)
T ss_pred chHHHHHHHHHHHHHcCCccCCCcccCCCCccccccHHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHCC
Confidence 34578999999999984455889999998866431 1123333444444455557789999999999999999999888
Q ss_pred Cc----cCeEEEecCCC
Q 024392 187 DQ----VTGVALLNSAG 199 (268)
Q Consensus 187 ~~----v~~lvl~~~~~ 199 (268)
+. |+++|.++++.
T Consensus 185 ~~~~k~I~~~I~la~P~ 201 (440)
T PLN02733 185 DVFEKYVNSWIAIAAPF 201 (440)
T ss_pred HhHHhHhccEEEECCCC
Confidence 63 78999998864
No 110
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.66 E-value=1.5e-07 Score=78.09 Aligned_cols=103 Identities=17% Similarity=0.253 Sum_probs=73.3
Q ss_pred cCCCcEEEECCCCCChhhHHHhHHHHHhc-CeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHH----HHh-------cC
Q 024392 96 GEGSPVVLIHGFGASAFHWRYNIPELAKR-YKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFL----KEI-------VK 163 (268)
Q Consensus 96 g~~~~vv~lHG~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l----~~~-------~~ 163 (268)
|.-|+|+|+||+.-....|..+...++.+ |-|+++++-..-. +...+.-+.+..+.+++ .++ +.
T Consensus 44 G~yPVilF~HG~~l~ns~Ys~lL~HIASHGfIVVAPQl~~~~~----p~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl 119 (307)
T PF07224_consen 44 GTYPVILFLHGFNLYNSFYSQLLAHIASHGFIVVAPQLYTLFP----PDGQDEIKSAASVINWLPEGLQHVLPENVEANL 119 (307)
T ss_pred CCccEEEEeechhhhhHHHHHHHHHHhhcCeEEEechhhcccC----CCchHHHHHHHHHHHHHHhhhhhhCCCCccccc
Confidence 45689999999999988999999999999 9999999874321 11111112222222222 222 24
Q ss_pred CCeEEEEeChHHHHHHHHHHhCC--CccCeEEEecCCCCCC
Q 024392 164 EPAVLVGNSLGGFAALVAAVGLP--DQVTGVALLNSAGQFG 202 (268)
Q Consensus 164 ~~~~lvG~S~Gg~~a~~~a~~~p--~~v~~lvl~~~~~~~~ 202 (268)
+++.++|||.||-.|..+|..+. -++++||.++|.....
T Consensus 120 ~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~~ 160 (307)
T PF07224_consen 120 SKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGTS 160 (307)
T ss_pred ceEEEeecCCccHHHHHHHhcccccCchhheecccccCCCC
Confidence 58999999999999999988763 2588999999975443
No 111
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=98.63 E-value=2.2e-07 Score=76.82 Aligned_cols=100 Identities=21% Similarity=0.115 Sum_probs=69.7
Q ss_pred CCCcEEEECCCCCChhhHHHhHHHHHhc-CeEEEEcCCCCCC-CCccc-cc---------CCHHHHHHHHHHHHHHhc--
Q 024392 97 EGSPVVLIHGFGASAFHWRYNIPELAKR-YKVYAVDLLGFGW-SEKAI-IE---------YDAMVWKDQIVDFLKEIV-- 162 (268)
Q Consensus 97 ~~~~vv~lHG~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~-s~~~~-~~---------~~~~~~~~~~~~~l~~~~-- 162 (268)
+.|.||++|++.|-......+++.|++. |.|+++|+.+... ..... .. ...+...+++.+.++.+.
T Consensus 13 ~~~~Vvv~~d~~G~~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~ 92 (218)
T PF01738_consen 13 PRPAVVVIHDIFGLNPNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLRAQ 92 (218)
T ss_dssp SEEEEEEE-BTTBS-HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHHCT
T ss_pred CCCEEEEEcCCCCCchHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhc
Confidence 4578999999988777777889999998 9999999865433 11111 00 013345566766666552
Q ss_pred ----CCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecC
Q 024392 163 ----KEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNS 197 (268)
Q Consensus 163 ----~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~ 197 (268)
.++|.++|+|+||.+++.++.+. +.+++.|..-|
T Consensus 93 ~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg 130 (218)
T PF01738_consen 93 PEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYG 130 (218)
T ss_dssp TTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-
T ss_pred cccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcC
Confidence 35899999999999999999888 57999998888
No 112
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.60 E-value=3.1e-07 Score=77.62 Aligned_cols=107 Identities=21% Similarity=0.202 Sum_probs=67.9
Q ss_pred CCCcEEEECCCCCChhhHHHhHHHHH-hc---CeEEEE--cCCCC----CCC---Cccc-------cc--CCHHHHHHHH
Q 024392 97 EGSPVVLIHGFGASAFHWRYNIPELA-KR---YKVYAV--DLLGF----GWS---EKAI-------IE--YDAMVWKDQI 154 (268)
Q Consensus 97 ~~~~vv~lHG~~~~~~~~~~~~~~l~-~~---~~v~~~--d~~G~----G~s---~~~~-------~~--~~~~~~~~~~ 154 (268)
+..|.||+||++++...+..++..+. +. ..++.+ +--|. |.- ...+ .. .+....+..+
T Consensus 10 ~~tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~wl 89 (255)
T PF06028_consen 10 STTPTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKWL 89 (255)
T ss_dssp S-EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHHH
T ss_pred CCCcEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHHH
Confidence 34689999999999999999999987 43 334333 33332 211 1111 11 2455566666
Q ss_pred HHHHHHh----cCCCeEEEEeChHHHHHHHHHHhCCC-----ccCeEEEecCCCCCCC
Q 024392 155 VDFLKEI----VKEPAVLVGNSLGGFAALVAAVGLPD-----QVTGVALLNSAGQFGD 203 (268)
Q Consensus 155 ~~~l~~~----~~~~~~lvG~S~Gg~~a~~~a~~~p~-----~v~~lvl~~~~~~~~~ 203 (268)
..++..+ +.+++.+|||||||..+..|+..+.. ++.++|.++++.+...
T Consensus 90 ~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~ 147 (255)
T PF06028_consen 90 KKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGIL 147 (255)
T ss_dssp HHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTT
T ss_pred HHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccc
Confidence 6666655 57899999999999999999887422 5899999999876543
No 113
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.59 E-value=2.3e-06 Score=71.83 Aligned_cols=102 Identities=26% Similarity=0.224 Sum_probs=79.9
Q ss_pred CcEEEECCCCCChhhHHHhHHHHHhc-CeEEEEcCCCC-CCCCccc-------c----cCCHHHHHHHHHHHHHHhc---
Q 024392 99 SPVVLIHGFGASAFHWRYNIPELAKR-YKVYAVDLLGF-GWSEKAI-------I----EYDAMVWKDQIVDFLKEIV--- 162 (268)
Q Consensus 99 ~~vv~lHG~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~-G~s~~~~-------~----~~~~~~~~~~~~~~l~~~~--- 162 (268)
|.||++|++.+-....+...+.|++. |.|+++|+.+. |.+.... . ..+..+...|+.+.++.+.
T Consensus 28 P~VIv~hei~Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~ 107 (236)
T COG0412 28 PGVIVLHEIFGLNPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQP 107 (236)
T ss_pred CEEEEEecccCCchHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhCC
Confidence 78999999999888999999999999 99999998763 3222111 0 1233566778887777763
Q ss_pred ---CCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCCCC
Q 024392 163 ---KEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQF 201 (268)
Q Consensus 163 ---~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 201 (268)
.++|.++|+||||.+++.++.+.| ++++.+..-+....
T Consensus 108 ~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~ 148 (236)
T COG0412 108 QVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIA 148 (236)
T ss_pred CCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCC
Confidence 457999999999999999999988 68998888886653
No 114
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.58 E-value=1.9e-07 Score=75.98 Aligned_cols=116 Identities=22% Similarity=0.338 Sum_probs=79.5
Q ss_pred eeCCeEEEEEEc---cCCC-cEEEECCCCCChhhHHHhHHHHHhc-CeEEEEcCCCCCCCCcccc---cCCHHHHHH-HH
Q 024392 84 TWRGHKIHYVVQ---GEGS-PVVLIHGFGASAFHWRYNIPELAKR-YKVYAVDLLGFGWSEKAII---EYDAMVWKD-QI 154 (268)
Q Consensus 84 ~~~g~~~~~~~~---g~~~-~vv~lHG~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~---~~~~~~~~~-~~ 154 (268)
-.||+.+....+ ++.+ .++.-.+.+.....|++++..+++. |.|..+|+||.|.|..... .+...|++. |+
T Consensus 12 ~~DG~~l~~~~~pA~~~~~g~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA~~D~ 91 (281)
T COG4757 12 APDGYSLPGQRFPADGKASGRLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDWARLDF 91 (281)
T ss_pred cCCCccCccccccCCCCCCCcEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccccCccchhhhhhcch
Confidence 446666554433 3333 4555556666667888999998888 9999999999999987543 366667653 67
Q ss_pred HHHHHHhc----CCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCCCC
Q 024392 155 VDFLKEIV----KEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQF 201 (268)
Q Consensus 155 ~~~l~~~~----~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 201 (268)
.+.++.+. ..+.+.+|||+||++.-.+ .+++ ++.+....+....+
T Consensus 92 ~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~-~~~~-k~~a~~vfG~gagw 140 (281)
T COG4757 92 PAALAALKKALPGHPLYFVGHSFGGQALGLL-GQHP-KYAAFAVFGSGAGW 140 (281)
T ss_pred HHHHHHHHhhCCCCceEEeeccccceeeccc-ccCc-ccceeeEecccccc
Confidence 77766654 3589999999999876544 4455 56666655555443
No 115
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=98.55 E-value=7.3e-07 Score=86.58 Aligned_cols=83 Identities=12% Similarity=0.004 Sum_probs=66.0
Q ss_pred hHHHHHhc-CeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHHhc--------------------CCCeEEEEeChHH
Q 024392 117 NIPELAKR-YKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIV--------------------KEPAVLVGNSLGG 175 (268)
Q Consensus 117 ~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~~--------------------~~~~~lvG~S~Gg 175 (268)
+.+.+.++ |.|+..|.||+|.|++....... +..+|..++|+++. ..+|.++|.|+||
T Consensus 271 ~~~~~~~rGYaVV~~D~RGtg~SeG~~~~~~~-~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G 349 (767)
T PRK05371 271 LNDYFLPRGFAVVYVSGIGTRGSDGCPTTGDY-QEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLG 349 (767)
T ss_pred HHHHHHhCCeEEEEEcCCCCCCCCCcCccCCH-HHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHH
Confidence 34667777 99999999999999986433333 34567777776664 3599999999999
Q ss_pred HHHHHHHHhCCCccCeEEEecCCCC
Q 024392 176 FAALVAAVGLPDQVTGVALLNSAGQ 200 (268)
Q Consensus 176 ~~a~~~a~~~p~~v~~lvl~~~~~~ 200 (268)
.+++.+|...|+.++++|.+++...
T Consensus 350 ~~~~~aAa~~pp~LkAIVp~a~is~ 374 (767)
T PRK05371 350 TLPNAVATTGVEGLETIIPEAAISS 374 (767)
T ss_pred HHHHHHHhhCCCcceEEEeeCCCCc
Confidence 9999999998889999999887643
No 116
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=98.52 E-value=2.2e-07 Score=76.23 Aligned_cols=94 Identities=27% Similarity=0.255 Sum_probs=60.5
Q ss_pred EEEECCCCCC---hhhHHHhHHHHHh-c-CeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHHh---------cCCCe
Q 024392 101 VVLIHGFGAS---AFHWRYNIPELAK-R-YKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEI---------VKEPA 166 (268)
Q Consensus 101 vv~lHG~~~~---~~~~~~~~~~l~~-~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~---------~~~~~ 166 (268)
||++||.+.. .+....+...+++ . +.|+.+|+|=.. +....+..+|+.+.++++ +.+++
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p-------~~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i 73 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAP-------EAPFPAALEDVKAAYRWLLKNADKLGIDPERI 73 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TT-------TSSTTHHHHHHHHHHHHHHHTHHHHTEEEEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeeccccc-------cccccccccccccceeeeccccccccccccce
Confidence 7999997643 3344455666664 4 999999999432 223334445555444332 35699
Q ss_pred EEEEeChHHHHHHHHHHhCCC----ccCeEEEecCCCCC
Q 024392 167 VLVGNSLGGFAALVAAVGLPD----QVTGVALLNSAGQF 201 (268)
Q Consensus 167 ~lvG~S~Gg~~a~~~a~~~p~----~v~~lvl~~~~~~~ 201 (268)
+++|+|-||.+++.++....+ .++++++++|..++
T Consensus 74 ~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 74 VLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDL 112 (211)
T ss_dssp EEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSST
T ss_pred EEeecccccchhhhhhhhhhhhcccchhhhhcccccccc
Confidence 999999999999999875322 48999999997655
No 117
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=98.51 E-value=1.5e-06 Score=68.94 Aligned_cols=101 Identities=15% Similarity=0.149 Sum_probs=68.3
Q ss_pred CCCcEEEECC-----CCCChhhHHHhHHHHHhc-CeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHHh---cCC--C
Q 024392 97 EGSPVVLIHG-----FGASAFHWRYNIPELAKR-YKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEI---VKE--P 165 (268)
Q Consensus 97 ~~~~vv~lHG-----~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~---~~~--~ 165 (268)
..|..|++|- ...+...-..++..|.+. |.++.+|+||.|+|.+.- +....+ .+|..+.++++ ..+ -
T Consensus 27 ~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~f-D~GiGE-~~Da~aaldW~~~~hp~s~~ 104 (210)
T COG2945 27 AAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEF-DNGIGE-LEDAAAALDWLQARHPDSAS 104 (210)
T ss_pred CCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcc-cCCcch-HHHHHHHHHHHHhhCCCchh
Confidence 3466777874 333333445667778888 999999999999998863 222221 34555555544 332 3
Q ss_pred eEEEEeChHHHHHHHHHHhCCCccCeEEEecCCCC
Q 024392 166 AVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQ 200 (268)
Q Consensus 166 ~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 200 (268)
..+.|+|+|+.+++.++.+.|+ ....+.+.+...
T Consensus 105 ~~l~GfSFGa~Ia~~la~r~~e-~~~~is~~p~~~ 138 (210)
T COG2945 105 CWLAGFSFGAYIAMQLAMRRPE-ILVFISILPPIN 138 (210)
T ss_pred hhhcccchHHHHHHHHHHhccc-ccceeeccCCCC
Confidence 4689999999999999999885 566666666554
No 118
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.46 E-value=2.7e-06 Score=65.62 Aligned_cols=102 Identities=22% Similarity=0.234 Sum_probs=75.3
Q ss_pred cEEEECCCCCChh--hHHHhHHHHHhc-CeEEEEcCCCC-----CCCCccc-ccCCHHHHHHHHHHHHHHhcCCCeEEEE
Q 024392 100 PVVLIHGFGASAF--HWRYNIPELAKR-YKVYAVDLLGF-----GWSEKAI-IEYDAMVWKDQIVDFLKEIVKEPAVLVG 170 (268)
Q Consensus 100 ~vv~lHG~~~~~~--~~~~~~~~l~~~-~~v~~~d~~G~-----G~s~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~lvG 170 (268)
+||+-||.+.+.+ ........|+.+ +.|..++++.. |.-..++ ...-...+...+.++.+.+...+.++-|
T Consensus 16 tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~~gpLi~GG 95 (213)
T COG3571 16 TILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLAEGPLIIGG 95 (213)
T ss_pred EEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcccCCceeecc
Confidence 6899999887765 566778888888 99999998754 3222222 2223345566666777766667999999
Q ss_pred eChHHHHHHHHHHhCCCccCeEEEecCCCCC
Q 024392 171 NSLGGFAALVAAVGLPDQVTGVALLNSAGQF 201 (268)
Q Consensus 171 ~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 201 (268)
+||||-++..++......|+++++++-+...
T Consensus 96 kSmGGR~aSmvade~~A~i~~L~clgYPfhp 126 (213)
T COG3571 96 KSMGGRVASMVADELQAPIDGLVCLGYPFHP 126 (213)
T ss_pred ccccchHHHHHHHhhcCCcceEEEecCccCC
Confidence 9999999999988765569999999876543
No 119
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.46 E-value=1.3e-06 Score=73.23 Aligned_cols=104 Identities=16% Similarity=0.081 Sum_probs=67.8
Q ss_pred CCCcEEEECCCCCChhhHHHhHHHHHh----cCeEEEEcCCCCCCCCc-ccccCCHHHHHHHHHHHHHHh----cCCCeE
Q 024392 97 EGSPVVLIHGFGASAFHWRYNIPELAK----RYKVYAVDLLGFGWSEK-AIIEYDAMVWKDQIVDFLKEI----VKEPAV 167 (268)
Q Consensus 97 ~~~~vv~lHG~~~~~~~~~~~~~~l~~----~~~v~~~d~~G~G~s~~-~~~~~~~~~~~~~~~~~l~~~----~~~~~~ 167 (268)
++..+||+||+..+.+.-......+.. ...++.+.||+.|.-.. .....+...-..++.++++.+ +.++|+
T Consensus 17 ~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~~I~ 96 (233)
T PF05990_consen 17 DKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGIKRIH 96 (233)
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCceEE
Confidence 467899999999987643222222222 25799999998875322 111123333344555555554 567999
Q ss_pred EEEeChHHHHHHHHHHh----CC-----CccCeEEEecCCCC
Q 024392 168 LVGNSLGGFAALVAAVG----LP-----DQVTGVALLNSAGQ 200 (268)
Q Consensus 168 lvG~S~Gg~~a~~~a~~----~p-----~~v~~lvl~~~~~~ 200 (268)
+++||||+.+.+..... .. .+++.+|+.+|-.+
T Consensus 97 ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid 138 (233)
T PF05990_consen 97 ILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDID 138 (233)
T ss_pred EEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCC
Confidence 99999999999887654 22 36889999988543
No 120
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.45 E-value=5.4e-07 Score=80.69 Aligned_cols=104 Identities=23% Similarity=0.219 Sum_probs=59.3
Q ss_pred cCCCcEEEECCCCCChhhHHHhHHHHHhc-CeEEEEcCCCCCCC------Ccc---cc---------------cC---C-
Q 024392 96 GEGSPVVLIHGFGASAFHWRYNIPELAKR-YKVYAVDLLGFGWS------EKA---II---------------EY---D- 146 (268)
Q Consensus 96 g~~~~vv~lHG~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s------~~~---~~---------------~~---~- 146 (268)
++-|+|||-||++++...|..+...|+.+ |-|+++|+|..-.. +.. .. .. .
T Consensus 98 ~~~PvvIFSHGlgg~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEE 177 (379)
T ss_dssp S-EEEEEEE--TT--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGH
T ss_pred CCCCEEEEeCCCCcchhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhH
Confidence 34589999999999999999999999999 99999999954211 000 00 00 0
Q ss_pred -------HHHHHHHHHHHHHHh--------------------------cCCCeEEEEeChHHHHHHHHHHhCCCccCeEE
Q 024392 147 -------AMVWKDQIVDFLKEI--------------------------VKEPAVLVGNSLGGFAALVAAVGLPDQVTGVA 193 (268)
Q Consensus 147 -------~~~~~~~~~~~l~~~--------------------------~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lv 193 (268)
.+.-++++..+++.+ +.+++.++|||+||..++..+.+. .++++.|
T Consensus 178 ~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~~I 256 (379)
T PF03403_consen 178 FELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFKAGI 256 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--EEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcceEE
Confidence 001122333333222 134789999999999999888776 5799999
Q ss_pred EecCCCC
Q 024392 194 LLNSAGQ 200 (268)
Q Consensus 194 l~~~~~~ 200 (268)
++++...
T Consensus 257 ~LD~W~~ 263 (379)
T PF03403_consen 257 LLDPWMF 263 (379)
T ss_dssp EES---T
T ss_pred EeCCccc
Confidence 9999764
No 121
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.44 E-value=6e-07 Score=74.38 Aligned_cols=84 Identities=25% Similarity=0.316 Sum_probs=49.4
Q ss_pred CcEEEECCCCCChhhHHHhHHHHHh---cCeEEEEcCCCCCCCCcccccCCHHH----HHHHHHHHHHHhcC--CCeEEE
Q 024392 99 SPVVLIHGFGASAFHWRYNIPELAK---RYKVYAVDLLGFGWSEKAIIEYDAMV----WKDQIVDFLKEIVK--EPAVLV 169 (268)
Q Consensus 99 ~~vv~lHG~~~~~~~~~~~~~~l~~---~~~v~~~d~~G~G~s~~~~~~~~~~~----~~~~~~~~l~~~~~--~~~~lv 169 (268)
-.||++||+.++..+|..+...+.. .+.-..+...++..... ....+.+. .++++.+.++.... .++.+|
T Consensus 5 hLvV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~~-~T~~gI~~~g~rL~~eI~~~~~~~~~~~~~IsfI 83 (217)
T PF05057_consen 5 HLVVFVHGLWGNPADMRYLKNHLEKIPEDLPNARIVVLGYSNNEF-KTFDGIDVCGERLAEEILEHIKDYESKIRKISFI 83 (217)
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHHhhhhcchhhhhhhccccccc-ccchhhHHHHHHHHHHHHHhccccccccccceEE
Confidence 3699999999999999877666655 22211222222211111 11122333 34444444444433 489999
Q ss_pred EeChHHHHHHHHHH
Q 024392 170 GNSLGGFAALVAAV 183 (268)
Q Consensus 170 G~S~Gg~~a~~~a~ 183 (268)
||||||.++..+..
T Consensus 84 gHSLGGli~r~al~ 97 (217)
T PF05057_consen 84 GHSLGGLIARYALG 97 (217)
T ss_pred EecccHHHHHHHHH
Confidence 99999999876654
No 122
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.44 E-value=7.2e-07 Score=78.74 Aligned_cols=101 Identities=23% Similarity=0.267 Sum_probs=78.7
Q ss_pred CCcEEEECCCCCChhhHHHhHHHHHhc-Ce---EEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHHhcCCCeEEEEeCh
Q 024392 98 GSPVVLIHGFGASAFHWRYNIPELAKR-YK---VYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVKEPAVLVGNSL 173 (268)
Q Consensus 98 ~~~vv~lHG~~~~~~~~~~~~~~l~~~-~~---v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~lvG~S~ 173 (268)
.-+++++||+..+...|..+...+.+. +. ++.++.++. ..........++..+-+.+.+.+.+.+++.++||||
T Consensus 59 ~~pivlVhG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~~~~~ql~~~V~~~l~~~ga~~v~LigHS~ 136 (336)
T COG1075 59 KEPIVLVHGLGGGYGNFLPLDYRLAILGWLTNGVYAFELSGG--DGTYSLAVRGEQLFAYVDEVLAKTGAKKVNLIGHSM 136 (336)
T ss_pred CceEEEEccCcCCcchhhhhhhhhcchHHHhccccccccccc--CCCccccccHHHHHHHHHHHHhhcCCCceEEEeecc
Confidence 348999999988888888776666655 55 888888755 211223445666677777888888889999999999
Q ss_pred HHHHHHHHHHhCC--CccCeEEEecCCCC
Q 024392 174 GGFAALVAAVGLP--DQVTGVALLNSAGQ 200 (268)
Q Consensus 174 Gg~~a~~~a~~~p--~~v~~lvl~~~~~~ 200 (268)
||....++....+ .+|+.++.++++-.
T Consensus 137 GG~~~ry~~~~~~~~~~V~~~~tl~tp~~ 165 (336)
T COG1075 137 GGLDSRYYLGVLGGANRVASVVTLGTPHH 165 (336)
T ss_pred cchhhHHHHhhcCccceEEEEEEeccCCC
Confidence 9999999999887 78999999999643
No 123
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=98.44 E-value=6.1e-07 Score=80.26 Aligned_cols=127 Identities=20% Similarity=0.177 Sum_probs=93.0
Q ss_pred CCCCCceEEeeCCeEEEEEEc----cCCCcEEEECCCCCChhhHHH------hHHHHHhc-CeEEEEcCCCCCCCCcc--
Q 024392 75 FKPEGYNFWTWRGHKIHYVVQ----GEGSPVVLIHGFGASAFHWRY------NIPELAKR-YKVYAVDLLGFGWSEKA-- 141 (268)
Q Consensus 75 ~~~~~~~~~~~~g~~~~~~~~----g~~~~vv~lHG~~~~~~~~~~------~~~~l~~~-~~v~~~d~~G~G~s~~~-- 141 (268)
.+.+.....|.||+-+..... +++|+|++.||+-.++..|-. +.=.|+++ |.|+.-+.||.-.|.+.
T Consensus 46 y~~E~h~V~T~DgYiL~lhRIp~~~~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h~~ 125 (403)
T KOG2624|consen 46 YPVEEHEVTTEDGYILTLHRIPRGKKKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKHKK 125 (403)
T ss_pred CceEEEEEEccCCeEEEEeeecCCCCCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhhcc
Confidence 334555667888886654432 467999999999999998843 33447777 99999999997766431
Q ss_pred --c------ccCCHHHHHH-HHHHHHHH----hcCCCeEEEEeChHHHHHHHHHHhCCC---ccCeEEEecCCCCC
Q 024392 142 --I------IEYDAMVWKD-QIVDFLKE----IVKEPAVLVGNSLGGFAALVAAVGLPD---QVTGVALLNSAGQF 201 (268)
Q Consensus 142 --~------~~~~~~~~~~-~~~~~l~~----~~~~~~~lvG~S~Gg~~a~~~a~~~p~---~v~~lvl~~~~~~~ 201 (268)
+ -++++.+++. |+-+.++. .+.++++.+|||+|+..........|+ +|+..++++|+...
T Consensus 126 l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~~ 201 (403)
T KOG2624|consen 126 LSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAFP 201 (403)
T ss_pred cCCcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchhhh
Confidence 1 1245555433 56655554 467899999999999999888888765 79999999998743
No 124
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.43 E-value=3.8e-06 Score=68.02 Aligned_cols=95 Identities=24% Similarity=0.218 Sum_probs=71.3
Q ss_pred EECCCC--CChhhHHHhHHHHHhcCeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHH-hcCCCeEEEEeChHHHHHH
Q 024392 103 LIHGFG--ASAFHWRYNIPELAKRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKE-IVKEPAVLVGNSLGGFAAL 179 (268)
Q Consensus 103 ~lHG~~--~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~lvG~S~Gg~~a~ 179 (268)
++|+.+ ++...|..+...+...+.|+.+|.+|++.+... ..+.+.+++++...+.. .+..+++++|||+||.++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~~~~g~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~a~ 79 (212)
T smart00824 2 CFPSTAAPSGPHEYARLAAALRGRRDVSALPLPGFGPGEPL--PASADALVEAQAEAVLRAAGGRPFVLVGHSSGGLLAH 79 (212)
T ss_pred ccCCCCCCCcHHHHHHHHHhcCCCccEEEecCCCCCCCCCC--CCCHHHHHHHHHHHHHHhcCCCCeEEEEECHHHHHHH
Confidence 345433 566789999999988899999999999865543 34566666665554443 3456899999999999999
Q ss_pred HHHHh---CCCccCeEEEecCCC
Q 024392 180 VAAVG---LPDQVTGVALLNSAG 199 (268)
Q Consensus 180 ~~a~~---~p~~v~~lvl~~~~~ 199 (268)
..+.+ .++.+.+++++++..
T Consensus 80 ~~a~~l~~~~~~~~~l~~~~~~~ 102 (212)
T smart00824 80 AVAARLEARGIPPAAVVLLDTYP 102 (212)
T ss_pred HHHHHHHhCCCCCcEEEEEccCC
Confidence 88875 456789999888754
No 125
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.43 E-value=2.6e-06 Score=66.74 Aligned_cols=90 Identities=22% Similarity=0.295 Sum_probs=66.8
Q ss_pred CcEEEECCCCCChh-hHHHhHHHHHhc-CeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHHhcCCCeEEEEeChHHH
Q 024392 99 SPVVLIHGFGASAF-HWRYNIPELAKR-YKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVKEPAVLVGNSLGGF 176 (268)
Q Consensus 99 ~~vv~lHG~~~~~~-~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~lvG~S~Gg~ 176 (268)
+.+|++||+.+++. .|....+ ++ -.+-.+++. .......++|.+.+...+... .++++||+||+|+.
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we---~~l~~a~rveq~-------~w~~P~~~dWi~~l~~~v~a~-~~~~vlVAHSLGc~ 71 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWE---SALPNARRVEQD-------DWEAPVLDDWIARLEKEVNAA-EGPVVLVAHSLGCA 71 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHH---hhCccchhcccC-------CCCCCCHHHHHHHHHHHHhcc-CCCeEEEEecccHH
Confidence 56899999998874 4544332 22 233334433 223457888888888888776 46699999999999
Q ss_pred HHHHHHHhCCCccCeEEEecCCC
Q 024392 177 AALVAAVGLPDQVTGVALLNSAG 199 (268)
Q Consensus 177 ~a~~~a~~~p~~v~~lvl~~~~~ 199 (268)
.++.++.+....|+|+++++|+-
T Consensus 72 ~v~h~~~~~~~~V~GalLVAppd 94 (181)
T COG3545 72 TVAHWAEHIQRQVAGALLVAPPD 94 (181)
T ss_pred HHHHHHHhhhhccceEEEecCCC
Confidence 99999988777899999999964
No 126
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.39 E-value=2.2e-06 Score=73.99 Aligned_cols=101 Identities=19% Similarity=0.135 Sum_probs=72.3
Q ss_pred EeeCCeEEEEEEcc-----CCCcEEEECCCCCChhhH------HHhHHHHHhc--CeEEEEcCCCCCCCCcccccCCHHH
Q 024392 83 WTWRGHKIHYVVQG-----EGSPVVLIHGFGASAFHW------RYNIPELAKR--YKVYAVDLLGFGWSEKAIIEYDAMV 149 (268)
Q Consensus 83 ~~~~g~~~~~~~~g-----~~~~vv~lHG~~~~~~~~------~~~~~~l~~~--~~v~~~d~~G~G~s~~~~~~~~~~~ 149 (268)
+..|+..+.-.... ++.-+|+.-|.++.-+.. +..+..+++. .+|+.+++||.|.|.+.. +.++
T Consensus 117 Iq~D~~~IDt~~I~~~~a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~---s~~d 193 (365)
T PF05677_consen 117 IQYDGVKIDTMAIHQPEAKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPP---SRKD 193 (365)
T ss_pred EeeCCEEEEEEEeeCCCCCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCC---CHHH
Confidence 46677777643322 345799999988766551 1234444444 899999999999998875 3577
Q ss_pred HHHHHHHHHHHh-----c--CCCeEEEEeChHHHHHHHHHHhCC
Q 024392 150 WKDQIVDFLKEI-----V--KEPAVLVGNSLGGFAALVAAVGLP 186 (268)
Q Consensus 150 ~~~~~~~~l~~~-----~--~~~~~lvG~S~Gg~~a~~~a~~~p 186 (268)
++.|..+.++.+ | .+++.+.|||+||.++..++.++.
T Consensus 194 Lv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~ 237 (365)
T PF05677_consen 194 LVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKEV 237 (365)
T ss_pred HHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhcc
Confidence 777766666554 2 368999999999999998777654
No 127
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=98.35 E-value=6.3e-06 Score=75.80 Aligned_cols=115 Identities=19% Similarity=0.219 Sum_probs=80.4
Q ss_pred CeEEEEEEcc------CCCcEEEECCCCCChhhHHHhHH------------------HHHhcCeEEEEcCC-CCCCCCcc
Q 024392 87 GHKIHYVVQG------EGSPVVLIHGFGASAFHWRYNIP------------------ELAKRYKVYAVDLL-GFGWSEKA 141 (268)
Q Consensus 87 g~~~~~~~~g------~~~~vv~lHG~~~~~~~~~~~~~------------------~l~~~~~v~~~d~~-G~G~s~~~ 141 (268)
+..++|+... +.|.||+++|.+|.+..+..+.+ .+.+..+++.+|+| |+|.|...
T Consensus 60 ~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~~~~l~iDqP~G~G~S~~~ 139 (462)
T PTZ00472 60 DKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNEAYVIYVDQPAGVGFSYAD 139 (462)
T ss_pred CceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccccccCeEEEeCCCCcCcccCC
Confidence 4677777543 45889999999998865522210 13444789999985 88887553
Q ss_pred c--ccCCHHHHHHHHHHHHHHh-------cCCCeEEEEeChHHHHHHHHHHhC----------CCccCeEEEecCCCCC
Q 024392 142 I--IEYDAMVWKDQIVDFLKEI-------VKEPAVLVGNSLGGFAALVAAVGL----------PDQVTGVALLNSAGQF 201 (268)
Q Consensus 142 ~--~~~~~~~~~~~~~~~l~~~-------~~~~~~lvG~S~Gg~~a~~~a~~~----------p~~v~~lvl~~~~~~~ 201 (268)
. ...+.++.++|+.++++.. ...+++|+|||+||..+..+|.+- .-.++|+++-++..+.
T Consensus 140 ~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~dp 218 (462)
T PTZ00472 140 KADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLTDP 218 (462)
T ss_pred CCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEeccccCh
Confidence 2 2345577788888888743 346899999999999888777641 1247899988886543
No 128
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.35 E-value=7.5e-07 Score=78.28 Aligned_cols=100 Identities=25% Similarity=0.234 Sum_probs=58.5
Q ss_pred CCcEEEECCCCCChhhH------------------HHhHHHHHhc-CeEEEEcCCCCCCCCccc-----ccCCHHHHH--
Q 024392 98 GSPVVLIHGFGASAFHW------------------RYNIPELAKR-YKVYAVDLLGFGWSEKAI-----IEYDAMVWK-- 151 (268)
Q Consensus 98 ~~~vv~lHG~~~~~~~~------------------~~~~~~l~~~-~~v~~~d~~G~G~s~~~~-----~~~~~~~~~-- 151 (268)
-|.||++||-++.++.. ..+...|+++ |.|+++|.+|+|+..... ..++...++
T Consensus 115 ~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~ 194 (390)
T PF12715_consen 115 FPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALARN 194 (390)
T ss_dssp EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHH
T ss_pred CCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEccccccccccccccccccchhHHHHHHH
Confidence 36899999987766431 1235678888 999999999999764421 111111111
Q ss_pred -------------HHHHHHHHHh------cCCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCC
Q 024392 152 -------------DQIVDFLKEI------VKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSA 198 (268)
Q Consensus 152 -------------~~~~~~l~~~------~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~ 198 (268)
-|....++.+ +.++|.++|+||||..++.+++..+ +|++.|..+-.
T Consensus 195 ~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALDd-RIka~v~~~~l 259 (390)
T PF12715_consen 195 LLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALDD-RIKATVANGYL 259 (390)
T ss_dssp HHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH-T-T--EEEEES-B
T ss_pred HHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcch-hhHhHhhhhhh
Confidence 1222344443 3569999999999999999999876 78888766553
No 129
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.35 E-value=6.4e-06 Score=68.08 Aligned_cols=102 Identities=22% Similarity=0.241 Sum_probs=71.0
Q ss_pred CcEEEECCCCCChhhHHHhHHHHHhcCe------EEEEcCCCC----CCCCc----cc-------ccCCHHHHHHHHHHH
Q 024392 99 SPVVLIHGFGASAFHWRYNIPELAKRYK------VYAVDLLGF----GWSEK----AI-------IEYDAMVWKDQIVDF 157 (268)
Q Consensus 99 ~~vv~lHG~~~~~~~~~~~~~~l~~~~~------v~~~d~~G~----G~s~~----~~-------~~~~~~~~~~~~~~~ 157 (268)
-|.||+||.+|+..+...++..|.+.++ ++.+|--|. |.-+. +. ...+..++...+..+
T Consensus 46 iPTIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~~ 125 (288)
T COG4814 46 IPTIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKKA 125 (288)
T ss_pred cceEEEecCCCChhHHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHHH
Confidence 3889999999999999999988877652 555665552 11111 10 112334444444444
Q ss_pred HHH----hcCCCeEEEEeChHHHHHHHHHHhCCC-----ccCeEEEecCCCC
Q 024392 158 LKE----IVKEPAVLVGNSLGGFAALVAAVGLPD-----QVTGVALLNSAGQ 200 (268)
Q Consensus 158 l~~----~~~~~~~lvG~S~Gg~~a~~~a~~~p~-----~v~~lvl~~~~~~ 200 (268)
+.. .+++++.+|||||||.-..+|...+.. .++.+|.++++.+
T Consensus 126 msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 126 MSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 444 468899999999999999888876421 4899999999876
No 130
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=98.30 E-value=1.1e-05 Score=66.55 Aligned_cols=113 Identities=17% Similarity=0.169 Sum_probs=71.2
Q ss_pred eCCeEEEEEEcc-------CCCcEEEECCCCCChhhHHHhHHHHHhc-CeEEEEcCCCC-CCCCcccccCCHHHHHHHHH
Q 024392 85 WRGHKIHYVVQG-------EGSPVVLIHGFGASAFHWRYNIPELAKR-YKVYAVDLLGF-GWSEKAIIEYDAMVWKDQIV 155 (268)
Q Consensus 85 ~~g~~~~~~~~g-------~~~~vv~lHG~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~-G~s~~~~~~~~~~~~~~~~~ 155 (268)
-+|..++.+... +.++||+..|++...+.+..++.+|+.+ |+|+.+|.--| |.|++...++++....+++.
T Consensus 10 ~~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSsG~I~eftms~g~~sL~ 89 (294)
T PF02273_consen 10 EDGRQIRVWETRPKNNEPKRNNTILIAPGFARRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSSGDINEFTMSIGKASLL 89 (294)
T ss_dssp TTTEEEEEEEE---TTS---S-EEEEE-TT-GGGGGGHHHHHHHHTTT--EEEE---B-------------HHHHHHHHH
T ss_pred CCCCEEEEeccCCCCCCcccCCeEEEecchhHHHHHHHHHHHHHhhCCeEEEeccccccccCCCCChhhcchHHhHHHHH
Confidence 367888877643 2368999999999999999999999998 99999998876 99999888889988888888
Q ss_pred HHHHHh---cCCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCC
Q 024392 156 DFLKEI---VKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAG 199 (268)
Q Consensus 156 ~~l~~~---~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 199 (268)
.+++++ |..++.|+.-|+.|-+|+..+.+- .+.-+|..-+..
T Consensus 90 ~V~dwl~~~g~~~~GLIAaSLSaRIAy~Va~~i--~lsfLitaVGVV 134 (294)
T PF02273_consen 90 TVIDWLATRGIRRIGLIAASLSARIAYEVAADI--NLSFLITAVGVV 134 (294)
T ss_dssp HHHHHHHHTT---EEEEEETTHHHHHHHHTTTS----SEEEEES--S
T ss_pred HHHHHHHhcCCCcchhhhhhhhHHHHHHHhhcc--CcceEEEEeeee
Confidence 777665 678999999999999999998854 477777666643
No 131
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.28 E-value=5.1e-06 Score=71.52 Aligned_cols=98 Identities=24% Similarity=0.258 Sum_probs=69.8
Q ss_pred cEEEECCCCCChhhHHHhHHHHHhcCeEEEEcCCCCCCCCcccccCCHHHHHHHHHHH-HHHhc--CCCeEEEEeChHHH
Q 024392 100 PVVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDF-LKEIV--KEPAVLVGNSLGGF 176 (268)
Q Consensus 100 ~vv~lHG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~-l~~~~--~~~~~lvG~S~Gg~ 176 (268)
.||+..|..+--+. .-+..-+.-.|.|+.+++||++.|.+.+...+....++.+.++ ++.++ .+.|++.|||.||.
T Consensus 245 LvIC~EGNAGFYEv-G~m~tP~~lgYsvLGwNhPGFagSTG~P~p~n~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF 323 (517)
T KOG1553|consen 245 LVICFEGNAGFYEV-GVMNTPAQLGYSVLGWNHPGFAGSTGLPYPVNTLNAADAVVQFAIQVLGFRQEDIILYGWSIGGF 323 (517)
T ss_pred EEEEecCCccceEe-eeecChHHhCceeeccCCCCccccCCCCCcccchHHHHHHHHHHHHHcCCCccceEEEEeecCCc
Confidence 57778786653221 1112234445999999999999999876555444444444443 44555 46899999999999
Q ss_pred HHHHHHHhCCCccCeEEEecCCC
Q 024392 177 AALVAAVGLPDQVTGVALLNSAG 199 (268)
Q Consensus 177 ~a~~~a~~~p~~v~~lvl~~~~~ 199 (268)
.+.++|..+|+ |+++|+-++.-
T Consensus 324 ~~~waAs~YPd-VkavvLDAtFD 345 (517)
T KOG1553|consen 324 PVAWAASNYPD-VKAVVLDATFD 345 (517)
T ss_pred hHHHHhhcCCC-ceEEEeecchh
Confidence 99999999996 99999777643
No 132
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=98.27 E-value=6.4e-06 Score=71.97 Aligned_cols=104 Identities=16% Similarity=0.035 Sum_probs=66.8
Q ss_pred CCCcEEEECCCCCC---hhhHHHhH-HHHHhc-CeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHH---hc--CCCe
Q 024392 97 EGSPVVLIHGFGAS---AFHWRYNI-PELAKR-YKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKE---IV--KEPA 166 (268)
Q Consensus 97 ~~~~vv~lHG~~~~---~~~~~~~~-~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~---~~--~~~~ 166 (268)
..|+||++||.+.. .+...... ..+... +.|+.+|+|-.-+-. .....++..+.+.-+.++ ++ .++|
T Consensus 78 ~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~~---~p~~~~d~~~a~~~l~~~~~~~g~dp~~i 154 (312)
T COG0657 78 TAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEHP---FPAALEDAYAAYRWLRANAAELGIDPSRI 154 (312)
T ss_pred CCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCCC---CCchHHHHHHHHHHHHhhhHhhCCCccce
Confidence 36899999997643 33443444 444444 999999999543321 222333322222222222 23 5689
Q ss_pred EEEEeChHHHHHHHHHHhCCC----ccCeEEEecCCCCCCC
Q 024392 167 VLVGNSLGGFAALVAAVGLPD----QVTGVALLNSAGQFGD 203 (268)
Q Consensus 167 ~lvG~S~Gg~~a~~~a~~~p~----~v~~lvl~~~~~~~~~ 203 (268)
.++|+|-||++++.++..-.+ ...+.+++.|..+...
T Consensus 155 ~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~ 195 (312)
T COG0657 155 AVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTS 195 (312)
T ss_pred EEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcc
Confidence 999999999999998876433 4789999999876654
No 133
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.24 E-value=3.1e-06 Score=78.11 Aligned_cols=128 Identities=16% Similarity=0.074 Sum_probs=84.2
Q ss_pred ceEEeeCCeEEEEE---Ec--cCCCcEEEECCCCCChhh-----HHHhHH---HHHhc-CeEEEEcCCCCCCCCcccccC
Q 024392 80 YNFWTWRGHKIHYV---VQ--GEGSPVVLIHGFGASAFH-----WRYNIP---ELAKR-YKVYAVDLLGFGWSEKAIIEY 145 (268)
Q Consensus 80 ~~~~~~~g~~~~~~---~~--g~~~~vv~lHG~~~~~~~-----~~~~~~---~l~~~-~~v~~~d~~G~G~s~~~~~~~ 145 (268)
..+..-||.+|+.. .. |+.|+++..+-++-.... -....+ .++.+ |.|+..|.||.|.|++....+
T Consensus 22 v~V~MRDGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~~~~~ 101 (563)
T COG2936 22 VMVPMRDGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGVFDPE 101 (563)
T ss_pred eeEEecCCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCccccee
Confidence 34556789998744 33 355777777732222221 111223 35555 999999999999999864332
Q ss_pred CHHHHHH---HHHHHHHHhc--CCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCCCCCCCCCCC
Q 024392 146 DAMVWKD---QIVDFLKEIV--KEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQFGDGRKGS 208 (268)
Q Consensus 146 ~~~~~~~---~~~~~l~~~~--~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 208 (268)
.. +.++ |+++++.... ..+|..+|.|++|...+.+|+..|..+++++...+..+......+.
T Consensus 102 ~~-~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D~y~d~~~~ 168 (563)
T COG2936 102 SS-REAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVDRYRDDAFY 168 (563)
T ss_pred cc-ccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeecccccccccccccccc
Confidence 22 2234 4444444432 3489999999999999999999988999999988876644333333
No 134
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=98.18 E-value=1.4e-05 Score=70.73 Aligned_cols=106 Identities=13% Similarity=0.162 Sum_probs=79.5
Q ss_pred CCcEEEECCCCCChhhH-----HHhHHHHHhc-CeEEEEcCCCCCCCCcccccCCHHHHH-H----HHHHHHHHhcCCCe
Q 024392 98 GSPVVLIHGFGASAFHW-----RYNIPELAKR-YKVYAVDLLGFGWSEKAIIEYDAMVWK-D----QIVDFLKEIVKEPA 166 (268)
Q Consensus 98 ~~~vv~lHG~~~~~~~~-----~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~-~----~~~~~l~~~~~~~~ 166 (268)
++|++++|-+-..-+.| ..++..+.++ +.|+.+|+++=..+.. ..+++++. + .+..+.+..+.++|
T Consensus 107 ~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~---~~~~edYi~e~l~~aid~v~~itg~~~I 183 (445)
T COG3243 107 KRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLA---AKNLEDYILEGLSEAIDTVKDITGQKDI 183 (445)
T ss_pred CCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhh---hccHHHHHHHHHHHHHHHHHHHhCcccc
Confidence 45899999876655443 3567777777 9999999986554443 34555555 3 34444455678999
Q ss_pred EEEEeChHHHHHHHHHHhCCCc-cCeEEEecCCCCCCCCCC
Q 024392 167 VLVGNSLGGFAALVAAVGLPDQ-VTGVALLNSAGQFGDGRK 206 (268)
Q Consensus 167 ~lvG~S~Gg~~a~~~a~~~p~~-v~~lvl~~~~~~~~~~~~ 206 (268)
.++||+.||.+...+++.++.+ |+.++++.+..++.....
T Consensus 184 nliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~~g~ 224 (445)
T COG3243 184 NLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSHAGD 224 (445)
T ss_pred ceeeEecchHHHHHHHHhhhhcccccceeeecchhhccccc
Confidence 9999999999999999988887 999999999888776543
No 135
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.17 E-value=7.1e-06 Score=65.54 Aligned_cols=96 Identities=25% Similarity=0.288 Sum_probs=75.4
Q ss_pred CcEEEECCCCCChhhHHHhHHHHHhc-CeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHH----hcCCCeEEEEeCh
Q 024392 99 SPVVLIHGFGASAFHWRYNIPELAKR-YKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKE----IVKEPAVLVGNSL 173 (268)
Q Consensus 99 ~~vv~lHG~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~lvG~S~ 173 (268)
..+||+-|=++....=..+.+.|+++ +.|+.+|-+-|=++.+ +.++.++|+.+++++ .+.++++|+|+|+
T Consensus 3 t~~v~~SGDgGw~~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~r-----tP~~~a~Dl~~~i~~y~~~w~~~~vvLiGYSF 77 (192)
T PF06057_consen 3 TLAVFFSGDGGWRDLDKQIAEALAKQGVPVVGVDSLRYFWSER-----TPEQTAADLARIIRHYRARWGRKRVVLIGYSF 77 (192)
T ss_pred EEEEEEeCCCCchhhhHHHHHHHHHCCCeEEEechHHHHhhhC-----CHHHHHHHHHHHHHHHHHHhCCceEEEEeecC
Confidence 35788888887765545678889998 9999999887766544 456667777777755 4678999999999
Q ss_pred HHHHHHHHHHhCCC----ccCeEEEecCCC
Q 024392 174 GGFAALVAAVGLPD----QVTGVALLNSAG 199 (268)
Q Consensus 174 Gg~~a~~~a~~~p~----~v~~lvl~~~~~ 199 (268)
|+-+.-....+.|+ +|+.++++++..
T Consensus 78 GADvlP~~~nrLp~~~r~~v~~v~Ll~p~~ 107 (192)
T PF06057_consen 78 GADVLPFIYNRLPAALRARVAQVVLLSPST 107 (192)
T ss_pred CchhHHHHHhhCCHHHHhheeEEEEeccCC
Confidence 99888887777764 699999999965
No 136
>PRK04940 hypothetical protein; Provisional
Probab=98.14 E-value=1.8e-05 Score=62.97 Aligned_cols=86 Identities=12% Similarity=0.162 Sum_probs=53.1
Q ss_pred EEEECCCCCChhh--HHHh-HHHHHhcCeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHHh-c---CCCeEEEEeCh
Q 024392 101 VVLIHGFGASAFH--WRYN-IPELAKRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEI-V---KEPAVLVGNSL 173 (268)
Q Consensus 101 vv~lHG~~~~~~~--~~~~-~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~-~---~~~~~lvG~S~ 173 (268)
||++||+.++..+ .... ...+....+++ +++ .....+..+.+.+.+..+ . .+++.++|.|+
T Consensus 2 IlYlHGF~SS~~S~~~Ka~~l~~~~p~~~~~--~l~----------~~~P~~a~~~l~~~i~~~~~~~~~~~~~liGSSL 69 (180)
T PRK04940 2 IIYLHGFDSTSPGNHEKVLQLQFIDPDVRLI--SYS----------TLHPKHDMQHLLKEVDKMLQLSDDERPLICGVGL 69 (180)
T ss_pred EEEeCCCCCCCCccHHHHHhheeeCCCCeEE--ECC----------CCCHHHHHHHHHHHHHHhhhccCCCCcEEEEeCh
Confidence 7999999998876 4321 11221112222 221 123333344444555432 1 25799999999
Q ss_pred HHHHHHHHHHhCCCccCeEEEecCCCCC
Q 024392 174 GGFAALVAAVGLPDQVTGVALLNSAGQF 201 (268)
Q Consensus 174 Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 201 (268)
||+.|.+++.++. + ..|+++|+..+
T Consensus 70 GGyyA~~La~~~g--~-~aVLiNPAv~P 94 (180)
T PRK04940 70 GGYWAERIGFLCG--I-RQVIFNPNLFP 94 (180)
T ss_pred HHHHHHHHHHHHC--C-CEEEECCCCCh
Confidence 9999999999986 4 55779998754
No 137
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.11 E-value=5.3e-05 Score=68.69 Aligned_cols=102 Identities=18% Similarity=0.191 Sum_probs=62.0
Q ss_pred CCcEEEECCCCCChh-hHHHhHHHH-Hhc----CeEEEEcCCCC-CCCCcccccCC-HHHHHHHHHHHHHHh-----cCC
Q 024392 98 GSPVVLIHGFGASAF-HWRYNIPEL-AKR----YKVYAVDLLGF-GWSEKAIIEYD-AMVWKDQIVDFLKEI-----VKE 164 (268)
Q Consensus 98 ~~~vv~lHG~~~~~~-~~~~~~~~l-~~~----~~v~~~d~~G~-G~s~~~~~~~~-~~~~~~~~~~~l~~~-----~~~ 164 (268)
.|+|+++||...... .....+..| +++ ..++.+|..+. .++........ ...+.+++...+++. +.+
T Consensus 209 ~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~~~~~f~~~l~~eLlP~I~~~y~~~~d~~ 288 (411)
T PRK10439 209 RPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQELPCNADFWLAVQQELLPQVRAIAPFSDDAD 288 (411)
T ss_pred CCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcccccccCCchHHHHHHHHHHHHHHHHHhCCCCCCcc
Confidence 478888999432111 112223333 333 34677775321 11111111111 223446666666653 345
Q ss_pred CeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCC
Q 024392 165 PAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAG 199 (268)
Q Consensus 165 ~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 199 (268)
+.+|.|+||||..++.++.++|+++.+++.+++..
T Consensus 289 ~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 289 RTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSF 323 (411)
T ss_pred ceEEEEEChHHHHHHHHHHhCcccccEEEEeccce
Confidence 78999999999999999999999999999999874
No 138
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.10 E-value=0.0006 Score=59.56 Aligned_cols=101 Identities=15% Similarity=0.091 Sum_probs=66.6
Q ss_pred cEEEECCCCCChh---hHHHhHHHHHhc-CeEEEEcCCCC--CCCCc--------------cccc-------------CC
Q 024392 100 PVVLIHGFGASAF---HWRYNIPELAKR-YKVYAVDLLGF--GWSEK--------------AIIE-------------YD 146 (268)
Q Consensus 100 ~vv~lHG~~~~~~---~~~~~~~~l~~~-~~v~~~d~~G~--G~s~~--------------~~~~-------------~~ 146 (268)
.||++||.+.+.+ ....+-..|.+. |+++.+..|.- ..... .... ..
T Consensus 89 ~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 168 (310)
T PF12048_consen 89 AVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPASAQEAEA 168 (310)
T ss_pred EEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCccccccHhHH
Confidence 7999999998764 445667778888 99999888861 10000 0000 00
Q ss_pred H----HHHHHHHHHHH---HHhcCCCeEEEEeChHHHHHHHHHHhCCC-ccCeEEEecCCCC
Q 024392 147 A----MVWKDQIVDFL---KEIVKEPAVLVGNSLGGFAALVAAVGLPD-QVTGVALLNSAGQ 200 (268)
Q Consensus 147 ~----~~~~~~~~~~l---~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~-~v~~lvl~~~~~~ 200 (268)
. ..+.+-+.+++ ...+..+++|+||+.|+..+..+..+.+. .++++|++++...
T Consensus 169 ~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~~p 230 (310)
T PF12048_consen 169 REAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAYWP 230 (310)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCCCC
Confidence 1 11222233333 33355569999999999999999887764 5899999999653
No 139
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.08 E-value=1.4e-05 Score=67.37 Aligned_cols=52 Identities=21% Similarity=0.411 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHh-c--CCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCCCC
Q 024392 150 WKDQIVDFLKEI-V--KEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQF 201 (268)
Q Consensus 150 ~~~~~~~~l~~~-~--~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 201 (268)
+.+++...++.. . .++..+.|+||||..|+.++.+||+.+.+++.++|....
T Consensus 98 l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~ 152 (251)
T PF00756_consen 98 LTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALDP 152 (251)
T ss_dssp HHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESET
T ss_pred hhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCccccc
Confidence 345666666653 2 234899999999999999999999999999999986443
No 140
>COG4099 Predicted peptidase [General function prediction only]
Probab=98.04 E-value=2.8e-05 Score=65.82 Aligned_cols=38 Identities=24% Similarity=0.433 Sum_probs=35.6
Q ss_pred CCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCCC
Q 024392 163 KEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQ 200 (268)
Q Consensus 163 ~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 200 (268)
..||+++|.|+||+.++.++.++|+.+++.+++++..+
T Consensus 268 ~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~d 305 (387)
T COG4099 268 RSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGGD 305 (387)
T ss_pred cceEEEEeecCcchhhHHHHHhCchhhheeeeecCCCc
Confidence 45999999999999999999999999999999999876
No 141
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=98.03 E-value=6.7e-05 Score=64.44 Aligned_cols=97 Identities=20% Similarity=0.242 Sum_probs=60.5
Q ss_pred CCcEEEECCCCCChh---hHHHhHHHHHhc-CeEEEEcCC----CCCCCCcccccCCHHHHHHHHHHHHHHh--------
Q 024392 98 GSPVVLIHGFGASAF---HWRYNIPELAKR-YKVYAVDLL----GFGWSEKAIIEYDAMVWKDQIVDFLKEI-------- 161 (268)
Q Consensus 98 ~~~vv~lHG~~~~~~---~~~~~~~~l~~~-~~v~~~d~~----G~G~s~~~~~~~~~~~~~~~~~~~l~~~-------- 161 (268)
...||||.|++.... ....+++.|.+. |.++-+.++ |+|.+ +.++.++|+.++++.+
T Consensus 33 ~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~-------SL~~D~~eI~~~v~ylr~~~~g~~ 105 (303)
T PF08538_consen 33 PNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTS-------SLDRDVEEIAQLVEYLRSEKGGHF 105 (303)
T ss_dssp SSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S---------HHHHHHHHHHHHHHHHHHS----
T ss_pred CcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcc-------hhhhHHHHHHHHHHHHHHhhcccc
Confidence 347999999887653 456678888765 999998764 44433 4555567776666543
Q ss_pred cCCCeEEEEeChHHHHHHHHHHhCC-----CccCeEEEecCCCCC
Q 024392 162 VKEPAVLVGNSLGGFAALVAAVGLP-----DQVTGVALLNSAGQF 201 (268)
Q Consensus 162 ~~~~~~lvG~S~Gg~~a~~~a~~~p-----~~v~~lvl~~~~~~~ 201 (268)
+.++|+|+|||.|.+-+++|+.... ..|++.|+-+|..+.
T Consensus 106 ~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDR 150 (303)
T PF08538_consen 106 GREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDR 150 (303)
T ss_dssp --S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---T
T ss_pred CCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCCh
Confidence 3569999999999999999987642 579999999997654
No 142
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=97.99 E-value=2.2e-05 Score=68.69 Aligned_cols=90 Identities=26% Similarity=0.243 Sum_probs=63.3
Q ss_pred CCCcEEEECCCCCChhhHHHhHHHHHhc-CeEEEEcCCCC--CCCCccccc---CC---HHHHHHHHHHHHHH-------
Q 024392 97 EGSPVVLIHGFGASAFHWRYNIPELAKR-YKVYAVDLLGF--GWSEKAIIE---YD---AMVWKDQIVDFLKE------- 160 (268)
Q Consensus 97 ~~~~vv~lHG~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~--G~s~~~~~~---~~---~~~~~~~~~~~l~~------- 160 (268)
.-|.|++-||.+.+.+.+.++.+.+++. |.|..+|.+|. |........ +. +.+-..|+..+++.
T Consensus 70 ~~PlvvlshG~Gs~~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~s 149 (365)
T COG4188 70 LLPLVVLSHGSGSYVTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTAS 149 (365)
T ss_pred cCCeEEecCCCCCCccchhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhcC
Confidence 3478999999999999999999999999 99999999984 333222111 22 11222343333332
Q ss_pred ------hcCCCeEEEEeChHHHHHHHHHHhCC
Q 024392 161 ------IVKEPAVLVGNSLGGFAALVAAVGLP 186 (268)
Q Consensus 161 ------~~~~~~~lvG~S~Gg~~a~~~a~~~p 186 (268)
++..+|.++|||+||..+++++.-+.
T Consensus 150 P~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~ 181 (365)
T COG4188 150 PALAGRLDPQRVGVLGHSFGGYTAMELAGAEL 181 (365)
T ss_pred cccccccCccceEEEecccccHHHHHhccccc
Confidence 23458999999999999999876543
No 143
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.97 E-value=6.1e-05 Score=65.61 Aligned_cols=104 Identities=13% Similarity=0.100 Sum_probs=65.6
Q ss_pred CCCcEEEECCCCCChhh-HHHhHHHH--Hhc-CeEEEEcCCCCCCCCc-ccccCCHHHHHHHHHHHHHHh----cCCCeE
Q 024392 97 EGSPVVLIHGFGASAFH-WRYNIPEL--AKR-YKVYAVDLLGFGWSEK-AIIEYDAMVWKDQIVDFLKEI----VKEPAV 167 (268)
Q Consensus 97 ~~~~vv~lHG~~~~~~~-~~~~~~~l--~~~-~~v~~~d~~G~G~s~~-~~~~~~~~~~~~~~~~~l~~~----~~~~~~ 167 (268)
.+..+||+||+..+-+. -...++-. .+. ...+.+.||..|.--+ .....+.+.-..+++.+++.+ ..++|+
T Consensus 115 ~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~I~ 194 (377)
T COG4782 115 AKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKRIY 194 (377)
T ss_pred CCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCceEE
Confidence 34689999999877642 22333222 222 7788889987764321 111112222334555555554 467899
Q ss_pred EEEeChHHHHHHHHHHh--------CCCccCeEEEecCCCC
Q 024392 168 LVGNSLGGFAALVAAVG--------LPDQVTGVALLNSAGQ 200 (268)
Q Consensus 168 lvG~S~Gg~~a~~~a~~--------~p~~v~~lvl~~~~~~ 200 (268)
|++||||..+.++...+ .+.+++-+|+.+|-.+
T Consensus 195 ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD 235 (377)
T COG4782 195 LLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDID 235 (377)
T ss_pred EEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCC
Confidence 99999999999887764 2446888888888543
No 144
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.95 E-value=0.00021 Score=65.45 Aligned_cols=102 Identities=22% Similarity=0.191 Sum_probs=66.8
Q ss_pred CCcEEEECCCCCChhh-H--HHhHHHHHhc--CeEEEEcCCCCCCCCccc-------ccCCHHHHHHHHHHHHHHhc---
Q 024392 98 GSPVVLIHGFGASAFH-W--RYNIPELAKR--YKVYAVDLLGFGWSEKAI-------IEYDAMVWKDQIVDFLKEIV--- 162 (268)
Q Consensus 98 ~~~vv~lHG~~~~~~~-~--~~~~~~l~~~--~~v~~~d~~G~G~s~~~~-------~~~~~~~~~~~~~~~l~~~~--- 162 (268)
+|.+|++ |.-++.+. + ..++..|+++ -.++.+++|-||+|.+.. .-.+.++..+|+..+++++.
T Consensus 29 gpifl~~-ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~ 107 (434)
T PF05577_consen 29 GPIFLYI-GGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKY 107 (434)
T ss_dssp SEEEEEE---SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEE-CCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhh
Confidence 4544555 55555442 2 2355667777 679999999999997531 22478888899888887653
Q ss_pred ----CCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCCC
Q 024392 163 ----KEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQ 200 (268)
Q Consensus 163 ----~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 200 (268)
..|++++|-|+||+++.++-.++|+.+.|.+.-+++..
T Consensus 108 ~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 108 NTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQ 149 (434)
T ss_dssp TTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CC
T ss_pred cCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceee
Confidence 23899999999999999999999999999988777653
No 145
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=97.92 E-value=0.00011 Score=64.63 Aligned_cols=103 Identities=21% Similarity=0.063 Sum_probs=70.3
Q ss_pred CCCcEEEECCCCC-----ChhhHHHhHHHHHhc--CeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHH------hcC
Q 024392 97 EGSPVVLIHGFGA-----SAFHWRYNIPELAKR--YKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKE------IVK 163 (268)
Q Consensus 97 ~~~~vv~lHG~~~-----~~~~~~~~~~~l~~~--~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~------~~~ 163 (268)
..|.||++||.|. +...|+.+...++.. ..|+.+|+|=--+.. .....+|-.+.+.-+.++ .+.
T Consensus 89 ~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~---~Pa~y~D~~~Al~w~~~~~~~~~~~D~ 165 (336)
T KOG1515|consen 89 KLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHP---FPAAYDDGWAALKWVLKNSWLKLGADP 165 (336)
T ss_pred CceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCC---CCccchHHHHHHHHHHHhHHHHhCCCc
Confidence 3478999999763 234677777777666 889999998433222 223344433444333332 246
Q ss_pred CCeEEEEeChHHHHHHHHHHhC------CCccCeEEEecCCCCCC
Q 024392 164 EPAVLVGNSLGGFAALVAAVGL------PDQVTGVALLNSAGQFG 202 (268)
Q Consensus 164 ~~~~lvG~S~Gg~~a~~~a~~~------p~~v~~lvl~~~~~~~~ 202 (268)
++++|+|-|-||.+|..++.+. +.++++.|++-|.....
T Consensus 166 ~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~ 210 (336)
T KOG1515|consen 166 SRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGT 210 (336)
T ss_pred ccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCC
Confidence 7999999999999998887642 45799999999976543
No 146
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=97.91 E-value=0.00018 Score=65.18 Aligned_cols=114 Identities=17% Similarity=0.214 Sum_probs=75.9
Q ss_pred CeEEEEEEcc------CCCcEEEECCCCCChhhHHHhHH-------------------HHHhcCeEEEEcCC-CCCCCCc
Q 024392 87 GHKIHYVVQG------EGSPVVLIHGFGASAFHWRYNIP-------------------ELAKRYKVYAVDLL-GFGWSEK 140 (268)
Q Consensus 87 g~~~~~~~~g------~~~~vv~lHG~~~~~~~~~~~~~-------------------~l~~~~~v~~~d~~-G~G~s~~ 140 (268)
+..++|+... +.|.||.+.|.+|.+..+..+.+ .+.+..+++.+|+| |.|.|..
T Consensus 23 ~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~an~l~iD~PvGtGfS~~ 102 (415)
T PF00450_consen 23 NAHLFYWFFESRNDPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNKFANLLFIDQPVGTGFSYG 102 (415)
T ss_dssp TEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGGTSEEEEE--STTSTT-EE
T ss_pred CcEEEEEEEEeCCCCCCccEEEEecCCceeccccccccccCceEEeecccccccccccccccccceEEEeecCceEEeec
Confidence 6788887543 45789999999998877643321 13344789999965 8999866
Q ss_pred cccc---CCHHHHHHHHHHHHHHh-------cCCCeEEEEeChHHHHHHHHHH----hC------CCccCeEEEecCCCC
Q 024392 141 AIIE---YDAMVWKDQIVDFLKEI-------VKEPAVLVGNSLGGFAALVAAV----GL------PDQVTGVALLNSAGQ 200 (268)
Q Consensus 141 ~~~~---~~~~~~~~~~~~~l~~~-------~~~~~~lvG~S~Gg~~a~~~a~----~~------p~~v~~lvl~~~~~~ 200 (268)
.... .+.++.++|+.++|+.. ...+++|.|.|+||..+-.+|. .. +-.++|+++.++..+
T Consensus 103 ~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~~d 182 (415)
T PF00450_consen 103 NDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGWID 182 (415)
T ss_dssp SSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-SB
T ss_pred cccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccceecCcccc
Confidence 5433 36777888888877654 2348999999999997666654 33 345889999998754
No 147
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=97.84 E-value=0.00018 Score=69.98 Aligned_cols=119 Identities=17% Similarity=0.122 Sum_probs=81.3
Q ss_pred EEeeCCeEEEEEEcc--------CCCcEEEECCCCCChh-------hHHHhHHHHHhc-CeEEEEcCCCCCCCCcc----
Q 024392 82 FWTWRGHKIHYVVQG--------EGSPVVLIHGFGASAF-------HWRYNIPELAKR-YKVYAVDLLGFGWSEKA---- 141 (268)
Q Consensus 82 ~~~~~g~~~~~~~~g--------~~~~vv~lHG~~~~~~-------~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~---- 141 (268)
.+..+|...++...- +-|.+|.+||.+++.. .|... ..... +.|+.+|.||.|.....
T Consensus 502 ~i~~~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~--~~s~~g~~v~~vd~RGs~~~G~~~~~~ 579 (755)
T KOG2100|consen 502 KIEIDGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEV--VVSSRGFAVLQVDGRGSGGYGWDFRSA 579 (755)
T ss_pred EEEeccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHH--hhccCCeEEEEEcCCCcCCcchhHHHH
Confidence 345578888776432 2367888999987432 33332 23444 99999999998765432
Q ss_pred ----cccCCHHHHHHHHHHHHHHh--cCCCeEEEEeChHHHHHHHHHHhCCCccC-eEEEecCCCCCC
Q 024392 142 ----IIEYDAMVWKDQIVDFLKEI--VKEPAVLVGNSLGGFAALVAAVGLPDQVT-GVALLNSAGQFG 202 (268)
Q Consensus 142 ----~~~~~~~~~~~~~~~~l~~~--~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~-~lvl~~~~~~~~ 202 (268)
......+|....+..+++.. +.+++.++|||+||.+++..+..+++.+- ..+.++|..++.
T Consensus 580 ~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~ 647 (755)
T KOG2100|consen 580 LPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWL 647 (755)
T ss_pred hhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeee
Confidence 12345555555555555543 44599999999999999999999986554 449999987665
No 148
>COG3150 Predicted esterase [General function prediction only]
Probab=97.84 E-value=0.00012 Score=56.89 Aligned_cols=90 Identities=19% Similarity=0.252 Sum_probs=64.3
Q ss_pred EEEECCCCCChhhHHHh--HHHHHhcCeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHHhcCCCeEEEEeChHHHHH
Q 024392 101 VVLIHGFGASAFHWRYN--IPELAKRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVKEPAVLVGNSLGGFAA 178 (268)
Q Consensus 101 vv~lHG~~~~~~~~~~~--~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~lvG~S~Gg~~a 178 (268)
||++||+.++..+.+.. .+++.+...-+.+ +.. ....++...++.+..++.+.+.+...++|-|+||+.|
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~~~~~i~y-------~~p-~l~h~p~~a~~ele~~i~~~~~~~p~ivGssLGGY~A 73 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDEDVRDIEY-------STP-HLPHDPQQALKELEKAVQELGDESPLIVGSSLGGYYA 73 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhccccceee-------ecC-CCCCCHHHHHHHHHHHHHHcCCCCceEEeecchHHHH
Confidence 79999999988776543 3444444322222 211 1234677788999999999987889999999999999
Q ss_pred HHHHHhCCCccCeEEEecCCCCC
Q 024392 179 LVAAVGLPDQVTGVALLNSAGQF 201 (268)
Q Consensus 179 ~~~a~~~p~~v~~lvl~~~~~~~ 201 (268)
.+++.++. +++ |+++|+..+
T Consensus 74 t~l~~~~G--ira-v~~NPav~P 93 (191)
T COG3150 74 TWLGFLCG--IRA-VVFNPAVRP 93 (191)
T ss_pred HHHHHHhC--Chh-hhcCCCcCc
Confidence 99999985 555 447776543
No 149
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=97.82 E-value=0.00012 Score=67.93 Aligned_cols=102 Identities=14% Similarity=0.088 Sum_probs=72.0
Q ss_pred CCcEEEECCCCCChh---hHHH--h--HHHHHhc-CeEEEEcCCCCCCCCc--------ccccCCHHHHHHHHHHHHHHh
Q 024392 98 GSPVVLIHGFGASAF---HWRY--N--IPELAKR-YKVYAVDLLGFGWSEK--------AIIEYDAMVWKDQIVDFLKEI 161 (268)
Q Consensus 98 ~~~vv~lHG~~~~~~---~~~~--~--~~~l~~~-~~v~~~d~~G~G~s~~--------~~~~~~~~~~~~~~~~~l~~~ 161 (268)
-|+++++-|.++-.- .|.. . ...|+.. |.|+.+|-||.-.-.. .......+|.++.+.-+.++.
T Consensus 642 Yptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~ 721 (867)
T KOG2281|consen 642 YPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQT 721 (867)
T ss_pred CceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHHhc
Confidence 478999999876442 2322 2 2346666 9999999998643321 122345667777777777766
Q ss_pred c---CCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCC
Q 024392 162 V---KEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAG 199 (268)
Q Consensus 162 ~---~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 199 (268)
| .++|.+-|||+||++++....++|+-++..|.-+|..
T Consensus 722 gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT 762 (867)
T KOG2281|consen 722 GFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVT 762 (867)
T ss_pred CcccchheeEeccccccHHHHHHhhcCcceeeEEeccCcce
Confidence 4 5799999999999999999999998777666555543
No 150
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.81 E-value=0.00053 Score=56.86 Aligned_cols=103 Identities=17% Similarity=0.184 Sum_probs=77.0
Q ss_pred CCCcEEEECCCCCChhhHHHhHHHHHhc----CeEEEEcCCCCCCCC---c------ccccCCHHHHHHHHHHHHHHhcC
Q 024392 97 EGSPVVLIHGFGASAFHWRYNIPELAKR----YKVYAVDLLGFGWSE---K------AIIEYDAMVWKDQIVDFLKEIVK 163 (268)
Q Consensus 97 ~~~~vv~lHG~~~~~~~~~~~~~~l~~~----~~v~~~d~~G~G~s~---~------~~~~~~~~~~~~~~~~~l~~~~~ 163 (268)
+.+.++++.|.+|....|.++...|.+. ..++.+...||-.-. . ....++.++.++.-.+++++.-+
T Consensus 28 ~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~~~P 107 (301)
T KOG3975|consen 28 DKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKEYVP 107 (301)
T ss_pred CceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHHhCC
Confidence 4567899999999999998888776655 458998888885433 1 12346777788888888877643
Q ss_pred --CCeEEEEeChHHHHHHHHHHhCC--CccCeEEEecCCC
Q 024392 164 --EPAVLVGNSLGGFAALVAAVGLP--DQVTGVALLNSAG 199 (268)
Q Consensus 164 --~~~~lvG~S~Gg~~a~~~a~~~p--~~v~~lvl~~~~~ 199 (268)
.+++++|||-|+++.+....... -.|.+.+++-|..
T Consensus 108 k~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTI 147 (301)
T KOG3975|consen 108 KDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTI 147 (301)
T ss_pred CCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchH
Confidence 48999999999999999876422 2477888777754
No 151
>PLN02606 palmitoyl-protein thioesterase
Probab=97.81 E-value=0.00031 Score=60.34 Aligned_cols=98 Identities=20% Similarity=0.169 Sum_probs=62.0
Q ss_pred CCcEEEECCCCCC--hhhHHHhHHHHHh--cCeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHH---hcCCCeEEEE
Q 024392 98 GSPVVLIHGFGAS--AFHWRYNIPELAK--RYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKE---IVKEPAVLVG 170 (268)
Q Consensus 98 ~~~vv~lHG~~~~--~~~~~~~~~~l~~--~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~lvG 170 (268)
..|||++||++.+ ...+..+.+.+.+ .+.+..+. -|-+.. ...-.+..+.++.+-+.+.. +. +-+.++|
T Consensus 26 ~~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~~--~s~~~~~~~Qv~~vce~l~~~~~L~-~G~naIG 101 (306)
T PLN02606 26 SVPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGVQ--DSLFMPLRQQASIACEKIKQMKELS-EGYNIVA 101 (306)
T ss_pred CCCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCcc--cccccCHHHHHHHHHHHHhcchhhc-CceEEEE
Confidence 3589999999944 4466677777652 33333333 222221 11112344444444444433 32 4699999
Q ss_pred eChHHHHHHHHHHhCCC--ccCeEEEecCCC
Q 024392 171 NSLGGFAALVAAVGLPD--QVTGVALLNSAG 199 (268)
Q Consensus 171 ~S~Gg~~a~~~a~~~p~--~v~~lvl~~~~~ 199 (268)
+|.||.++..++.+.|+ .|+.+|.++++-
T Consensus 102 fSQGglflRa~ierc~~~p~V~nlISlggph 132 (306)
T PLN02606 102 ESQGNLVARGLIEFCDNAPPVINYVSLGGPH 132 (306)
T ss_pred EcchhHHHHHHHHHCCCCCCcceEEEecCCc
Confidence 99999999999999876 599999999853
No 152
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.78 E-value=0.0006 Score=64.77 Aligned_cols=99 Identities=24% Similarity=0.280 Sum_probs=56.1
Q ss_pred CCCcEEEECCCCCChhhHHHhHHHHH-----------------hcCeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHH
Q 024392 97 EGSPVVLIHGFGASAFHWRYNIPELA-----------------KRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLK 159 (268)
Q Consensus 97 ~~~~vv~lHG~~~~~~~~~~~~~~l~-----------------~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~ 159 (268)
+|-||+|++|..|+...-+.++.... .+++.+++|+-+- .+ ...+....+.++-+.+.++
T Consensus 88 sGIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe-~t--Am~G~~l~dQtEYV~dAIk 164 (973)
T KOG3724|consen 88 SGIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEE-FT--AMHGHILLDQTEYVNDAIK 164 (973)
T ss_pred CCceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccch-hh--hhccHhHHHHHHHHHHHHH
Confidence 45699999999998866555443322 1255666665420 00 0112233444444444333
Q ss_pred Hh-----c--------CCCeEEEEeChHHHHHHHHHHh---CCCccCeEEEecCC
Q 024392 160 EI-----V--------KEPAVLVGNSLGGFAALVAAVG---LPDQVTGVALLNSA 198 (268)
Q Consensus 160 ~~-----~--------~~~~~lvG~S~Gg~~a~~~a~~---~p~~v~~lvl~~~~ 198 (268)
.. + ++.++++||||||.+|...+.. .++.|.-++..+++
T Consensus 165 ~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssP 219 (973)
T KOG3724|consen 165 YILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSP 219 (973)
T ss_pred HHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCc
Confidence 21 2 2359999999999999776542 23456666666664
No 153
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=97.76 E-value=0.00018 Score=62.76 Aligned_cols=102 Identities=21% Similarity=0.193 Sum_probs=70.5
Q ss_pred CCCcEEEECCCCCChhhHHH-h-HHHHHhc-CeEEEEcCCCCCCCCcccccC----CHHHH-------H---HHHHHHHH
Q 024392 97 EGSPVVLIHGFGASAFHWRY-N-IPELAKR-YKVYAVDLLGFGWSEKAIIEY----DAMVW-------K---DQIVDFLK 159 (268)
Q Consensus 97 ~~~~vv~lHG~~~~~~~~~~-~-~~~l~~~-~~v~~~d~~G~G~s~~~~~~~----~~~~~-------~---~~~~~~l~ 159 (268)
.+|.+|.++|.++.....+. + +..|.++ +..+.+..|-||.-.+..+.. +..|+ + ..+..+++
T Consensus 91 ~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~Wl~ 170 (348)
T PF09752_consen 91 YRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHWLE 170 (348)
T ss_pred CCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHHHH
Confidence 36788899999886643322 3 5556555 999999999999765432111 11111 2 23334444
Q ss_pred HhcCCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCC
Q 024392 160 EIVKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSA 198 (268)
Q Consensus 160 ~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~ 198 (268)
+.|..++.+.|.||||.+|...+..+|..+..+-.+++.
T Consensus 171 ~~G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~ 209 (348)
T PF09752_consen 171 REGYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWS 209 (348)
T ss_pred hcCCCceEEEEechhHhhHHhhhhcCCCceeEEEeeccc
Confidence 457889999999999999999999999877766666664
No 154
>PLN02633 palmitoyl protein thioesterase family protein
Probab=97.71 E-value=0.00052 Score=59.04 Aligned_cols=98 Identities=14% Similarity=0.109 Sum_probs=62.9
Q ss_pred CCcEEEECCCCCChh--hHHHhHHHHHhc--CeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHH---hcCCCeEEEE
Q 024392 98 GSPVVLIHGFGASAF--HWRYNIPELAKR--YKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKE---IVKEPAVLVG 170 (268)
Q Consensus 98 ~~~vv~lHG~~~~~~--~~~~~~~~l~~~--~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~lvG 170 (268)
..|+|+.||+|.+.. ....+.+.+.+. ..+..+.. |.+.....-.+..+.++.+-+.+.. +. +-++++|
T Consensus 25 ~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i---g~~~~~s~~~~~~~Qve~vce~l~~~~~l~-~G~naIG 100 (314)
T PLN02633 25 SVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI---GNGVGDSWLMPLTQQAEIACEKVKQMKELS-QGYNIVG 100 (314)
T ss_pred CCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE---CCCccccceeCHHHHHHHHHHHHhhchhhh-CcEEEEE
Confidence 358999999998764 344444444332 44444443 3322222223444445554444433 32 4699999
Q ss_pred eChHHHHHHHHHHhCCC--ccCeEEEecCCC
Q 024392 171 NSLGGFAALVAAVGLPD--QVTGVALLNSAG 199 (268)
Q Consensus 171 ~S~Gg~~a~~~a~~~p~--~v~~lvl~~~~~ 199 (268)
+|.||.++..++.+.|+ .|+.+|.++++-
T Consensus 101 fSQGGlflRa~ierc~~~p~V~nlISlggph 131 (314)
T PLN02633 101 RSQGNLVARGLIEFCDGGPPVYNYISLAGPH 131 (314)
T ss_pred EccchHHHHHHHHHCCCCCCcceEEEecCCC
Confidence 99999999999999876 599999999863
No 155
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=97.69 E-value=0.00048 Score=56.78 Aligned_cols=103 Identities=17% Similarity=0.088 Sum_probs=53.5
Q ss_pred CCCcEEEECCCCCChhhHHHh----HHHHHh-cCeEEEEcCCCC-----CCCC------------cc-----------cc
Q 024392 97 EGSPVVLIHGFGASAFHWRYN----IPELAK-RYKVYAVDLLGF-----GWSE------------KA-----------II 143 (268)
Q Consensus 97 ~~~~vv~lHG~~~~~~~~~~~----~~~l~~-~~~v~~~d~~G~-----G~s~------------~~-----------~~ 143 (268)
+++-||+|||++.|.+.++.. .+.|.+ .+..+.+|-|-- |-.. .+ ..
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 82 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHE 82 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGG
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCccc
Confidence 356799999999999877654 455676 588888775421 1110 00 01
Q ss_pred cCCHHHHHHHHHHHHHHhcCCCeEEEEeChHHHHHHHHHHhC--------CCccCeEEEecCCCC
Q 024392 144 EYDAMVWKDQIVDFLKEIVKEPAVLVGNSLGGFAALVAAVGL--------PDQVTGVALLNSAGQ 200 (268)
Q Consensus 144 ~~~~~~~~~~~~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~--------p~~v~~lvl~~~~~~ 200 (268)
....++..+.+.+.+++.|. -..++|+|+||.+|..++... ...++-+|++++...
T Consensus 83 ~~~~~~sl~~l~~~i~~~GP-fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p 146 (212)
T PF03959_consen 83 YEGLDESLDYLRDYIEENGP-FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPP 146 (212)
T ss_dssp G---HHHHHHHHHHHHHH----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----
T ss_pred ccCHHHHHHHHHHHHHhcCC-eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCC
Confidence 12345555666677776653 357999999999999887532 224788899988764
No 156
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=97.65 E-value=0.00021 Score=57.63 Aligned_cols=102 Identities=20% Similarity=0.215 Sum_probs=69.8
Q ss_pred CcEEEECCCCCChhhHHHhHHHHHhc-CeEEEEcCCCCCCC-----------Cc-------ccccCCHHHHHHHHHHHHH
Q 024392 99 SPVVLIHGFGASAFHWRYNIPELAKR-YKVYAVDLLGFGWS-----------EK-------AIIEYDAMVWKDQIVDFLK 159 (268)
Q Consensus 99 ~~vv~lHG~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s-----------~~-------~~~~~~~~~~~~~~~~~l~ 159 (268)
..||++||.+.++..|..+++.+.-. ..-+++..|-.-.+ +. ..........++.+..+++
T Consensus 4 atIi~LHglGDsg~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~Li~ 83 (206)
T KOG2112|consen 4 ATIIFLHGLGDSGSGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANLID 83 (206)
T ss_pred EEEEEEecCCCCCccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHHHH
Confidence 47999999999999998888776655 66666644322111 00 0011223333445556665
Q ss_pred Hh---c--CCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCCC
Q 024392 160 EI---V--KEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQ 200 (268)
Q Consensus 160 ~~---~--~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 200 (268)
+. + ..+|.+-|.|+||.++++.+..+|..+.+++...+...
T Consensus 84 ~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p 129 (206)
T KOG2112|consen 84 NEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLP 129 (206)
T ss_pred HHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccc
Confidence 43 3 45899999999999999999999888888887777544
No 157
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=97.63 E-value=7.5e-05 Score=63.71 Aligned_cols=102 Identities=20% Similarity=0.214 Sum_probs=69.5
Q ss_pred CCCcEEEECCCCCChhhHHHhHHHHHhc-CeEEEEcCCCCCCCC------c---cc------------cc--------CC
Q 024392 97 EGSPVVLIHGFGASAFHWRYNIPELAKR-YKVYAVDLLGFGWSE------K---AI------------IE--------YD 146 (268)
Q Consensus 97 ~~~~vv~lHG~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~------~---~~------------~~--------~~ 146 (268)
+-|.|||-||++++...|..+...|+.+ |.|.+++.|.+..+. . .+ .+ ..
T Consensus 117 k~PvvvFSHGLggsRt~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~irNeq 196 (399)
T KOG3847|consen 117 KYPVVVFSHGLGGSRTLYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIRNEQ 196 (399)
T ss_pred CccEEEEecccccchhhHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEeeCHH
Confidence 4589999999999999999999999999 999999998764321 0 00 00 00
Q ss_pred HHHHHHH---HHHHHHHhc------------------------CCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCC
Q 024392 147 AMVWKDQ---IVDFLKEIV------------------------KEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAG 199 (268)
Q Consensus 147 ~~~~~~~---~~~~l~~~~------------------------~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 199 (268)
...-+++ ...++++++ -.++.++|||+||..+......+. +++..|++++.-
T Consensus 197 v~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t-~FrcaI~lD~WM 275 (399)
T KOG3847|consen 197 VGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHT-DFRCAIALDAWM 275 (399)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhcccc-ceeeeeeeeeee
Confidence 1111122 222233221 236889999999998887777665 588888888864
No 158
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=97.61 E-value=0.00072 Score=59.94 Aligned_cols=104 Identities=13% Similarity=0.030 Sum_probs=69.8
Q ss_pred CCcEEEECCCCCChh----hHH---HhHHHHHhcCeEEEEcCCCCCCC-CcccccCCHHHHHHHHHHHHHHhcCCCeEEE
Q 024392 98 GSPVVLIHGFGASAF----HWR---YNIPELAKRYKVYAVDLLGFGWS-EKAIIEYDAMVWKDQIVDFLKEIVKEPAVLV 169 (268)
Q Consensus 98 ~~~vv~lHG~~~~~~----~~~---~~~~~l~~~~~v~~~d~~G~G~s-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~lv 169 (268)
.|+||++||.|---. ... .+...+. ...+++.|+.-...- .+........+.++-...+++..|.++++|+
T Consensus 122 DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~-~~SILvLDYsLt~~~~~~~~yPtQL~qlv~~Y~~Lv~~~G~~nI~Lm 200 (374)
T PF10340_consen 122 DPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP-EVSILVLDYSLTSSDEHGHKYPTQLRQLVATYDYLVESEGNKNIILM 200 (374)
T ss_pred CcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC-CCeEEEEeccccccccCCCcCchHHHHHHHHHHHHHhccCCCeEEEE
Confidence 588999999774432 222 2223333 468888898644300 1122334566666677777767788999999
Q ss_pred EeChHHHHHHHHHHh--CC---CccCeEEEecCCCCCC
Q 024392 170 GNSLGGFAALVAAVG--LP---DQVTGVALLNSAGQFG 202 (268)
Q Consensus 170 G~S~Gg~~a~~~a~~--~p---~~v~~lvl~~~~~~~~ 202 (268)
|-|-||.+++.+.+. ++ ...+++|+++|.....
T Consensus 201 GDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 201 GDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred ecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 999999999987653 11 2368999999988776
No 159
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=97.56 E-value=0.00028 Score=65.56 Aligned_cols=103 Identities=16% Similarity=0.103 Sum_probs=60.3
Q ss_pred CCCcEEEECCCCCC---hhhHHHhHHHHHh--c-CeEEEEcCC-C---CCCCCcc--cccCCHHHH---HHHHHHHHHHh
Q 024392 97 EGSPVVLIHGFGAS---AFHWRYNIPELAK--R-YKVYAVDLL-G---FGWSEKA--IIEYDAMVW---KDQIVDFLKEI 161 (268)
Q Consensus 97 ~~~~vv~lHG~~~~---~~~~~~~~~~l~~--~-~~v~~~d~~-G---~G~s~~~--~~~~~~~~~---~~~~~~~l~~~ 161 (268)
+.|++|++||.+.. ...+ ....+.. . +.|+.+++| | +...... .......|. .+.+.+-++..
T Consensus 94 ~~pv~v~ihGG~~~~g~~~~~--~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~f 171 (493)
T cd00312 94 SLPVMVWIHGGGFMFGSGSLY--PGDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAAF 171 (493)
T ss_pred CCCEEEEEcCCccccCCCCCC--ChHHHHhcCCCEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHh
Confidence 35789999996432 2221 1222332 2 789999998 3 3222211 111222222 12223333344
Q ss_pred c--CCCeEEEEeChHHHHHHHHHHh--CCCccCeEEEecCCCCC
Q 024392 162 V--KEPAVLVGNSLGGFAALVAAVG--LPDQVTGVALLNSAGQF 201 (268)
Q Consensus 162 ~--~~~~~lvG~S~Gg~~a~~~a~~--~p~~v~~lvl~~~~~~~ 201 (268)
| .++|.++|+|.||..+..++.. .+..++++|+.++....
T Consensus 172 ggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~~ 215 (493)
T cd00312 172 GGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSALS 215 (493)
T ss_pred CCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCccC
Confidence 4 4599999999999999887765 34568999999886543
No 160
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.54 E-value=0.00071 Score=61.06 Aligned_cols=79 Identities=16% Similarity=0.172 Sum_probs=54.8
Q ss_pred hHHHhHHHHHhc-Ce------EEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHHh---cCCCeEEEEeChHHHHHHHHH
Q 024392 113 HWRYNIPELAKR-YK------VYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEI---VKEPAVLVGNSLGGFAALVAA 182 (268)
Q Consensus 113 ~~~~~~~~l~~~-~~------v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~lvG~S~Gg~~a~~~a 182 (268)
.|..+++.|.+. |. ..-+|+|--- ...+++...+...+++. ..++++|+||||||.++..+.
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~~~--------~~~~~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~fl 137 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRLSP--------AERDEYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVARYFL 137 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhhch--------hhHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHHHHHH
Confidence 788899998774 32 2236777211 12334445555555443 357999999999999999998
Q ss_pred HhCCC------ccCeEEEecCCC
Q 024392 183 VGLPD------QVTGVALLNSAG 199 (268)
Q Consensus 183 ~~~p~------~v~~lvl~~~~~ 199 (268)
...+. .|+++|.++++.
T Consensus 138 ~~~~~~~W~~~~i~~~i~i~~p~ 160 (389)
T PF02450_consen 138 QWMPQEEWKDKYIKRFISIGTPF 160 (389)
T ss_pred HhccchhhHHhhhhEEEEeCCCC
Confidence 87643 599999999864
No 161
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=97.48 E-value=0.0015 Score=54.82 Aligned_cols=97 Identities=23% Similarity=0.227 Sum_probs=64.7
Q ss_pred CcEEEECCCCCChhh--HHHhHHHHHhc--CeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHHhc--CCCeEEEEeC
Q 024392 99 SPVVLIHGFGASAFH--WRYNIPELAKR--YKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIV--KEPAVLVGNS 172 (268)
Q Consensus 99 ~~vv~lHG~~~~~~~--~~~~~~~l~~~--~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~lvG~S 172 (268)
.|+|++||++....+ ...+.+.+.+. ..|++.|. |-| .....-....+.++.+-+.+.... .+-++++|.|
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g--~~~s~l~pl~~Qv~~~ce~v~~m~~lsqGynivg~S 100 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDG--IKDSSLMPLWEQVDVACEKVKQMPELSQGYNIVGYS 100 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCC--cchhhhccHHHHHHHHHHHHhcchhccCceEEEEEc
Confidence 589999999998876 66677777766 77888886 334 111111233333443333333211 3468999999
Q ss_pred hHHHHHHHHHHhCCC-ccCeEEEecCC
Q 024392 173 LGGFAALVAAVGLPD-QVTGVALLNSA 198 (268)
Q Consensus 173 ~Gg~~a~~~a~~~p~-~v~~lvl~~~~ 198 (268)
.||.++..++..-++ .|..+|.++++
T Consensus 101 QGglv~Raliq~cd~ppV~n~ISL~gP 127 (296)
T KOG2541|consen 101 QGGLVARALIQFCDNPPVKNFISLGGP 127 (296)
T ss_pred cccHHHHHHHHhCCCCCcceeEeccCC
Confidence 999999988876433 58999999885
No 162
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=97.46 E-value=0.00042 Score=58.98 Aligned_cols=101 Identities=20% Similarity=0.142 Sum_probs=52.9
Q ss_pred CCcEEEECCCCCCh---hhHHHhHHHHHhc---CeEEEEcCCCCCCCCcc--cccCCHHHHHHHHHHHHHHhc--CCCeE
Q 024392 98 GSPVVLIHGFGASA---FHWRYNIPELAKR---YKVYAVDLLGFGWSEKA--IIEYDAMVWKDQIVDFLKEIV--KEPAV 167 (268)
Q Consensus 98 ~~~vv~lHG~~~~~---~~~~~~~~~l~~~---~~v~~~d~~G~G~s~~~--~~~~~~~~~~~~~~~~l~~~~--~~~~~ 167 (268)
..|||+.||++.+. ..+..+.+.+.+. .-|..++. |-+.++.. ..-.+..+.++.+-+.++... .+-++
T Consensus 5 ~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~i-g~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~L~~G~~ 83 (279)
T PF02089_consen 5 PLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEI-GNDPSEDVENSFFGNVNDQVEQVCEQLANDPELANGFN 83 (279)
T ss_dssp S--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--S-SSSHHHHHHHHHHSHHHHHHHHHHHHHHH-GGGTT-EE
T ss_pred CCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEE-CCCcchhhhhhHHHHHHHHHHHHHHHHhhChhhhccee
Confidence 35899999999754 2455554444443 45566655 22211111 111234444455555554321 25699
Q ss_pred EEEeChHHHHHHHHHHhCCC-ccCeEEEecCCC
Q 024392 168 LVGNSLGGFAALVAAVGLPD-QVTGVALLNSAG 199 (268)
Q Consensus 168 lvG~S~Gg~~a~~~a~~~p~-~v~~lvl~~~~~ 199 (268)
++|+|.||.+...++.+.++ .|+.+|.++++-
T Consensus 84 ~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph 116 (279)
T PF02089_consen 84 AIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPH 116 (279)
T ss_dssp EEEETCHHHHHHHHHHH-TSS-EEEEEEES--T
T ss_pred eeeeccccHHHHHHHHHCCCCCceeEEEecCcc
Confidence 99999999999999999764 699999999963
No 163
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=97.41 E-value=0.00071 Score=54.60 Aligned_cols=98 Identities=18% Similarity=0.120 Sum_probs=60.3
Q ss_pred CCCcEEEECCCCC---Chh-hHHHhHHHHHhcCeEEEEcCCCCCCCCcccccCCHHHHHHHHHHH----HHHh-cCCCeE
Q 024392 97 EGSPVVLIHGFGA---SAF-HWRYNIPELAKRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDF----LKEI-VKEPAV 167 (268)
Q Consensus 97 ~~~~vv~lHG~~~---~~~-~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~----l~~~-~~~~~~ 167 (268)
+.+..||+||.-. +.. .....-..+...|+|..+++ +.+.. ..+..+...+...- ++.. ..+.+.
T Consensus 66 ~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY---~l~~q---~htL~qt~~~~~~gv~filk~~~n~k~l~ 139 (270)
T KOG4627|consen 66 QAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGY---NLCPQ---VHTLEQTMTQFTHGVNFILKYTENTKVLT 139 (270)
T ss_pred CccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEecc---CcCcc---cccHHHHHHHHHHHHHHHHHhcccceeEE
Confidence 5678999999532 221 22222333444499988865 34332 22344333443333 3333 345788
Q ss_pred EEEeChHHHHHHHHHHh-CCCccCeEEEecCCCC
Q 024392 168 LVGNSLGGFAALVAAVG-LPDQVTGVALLNSAGQ 200 (268)
Q Consensus 168 lvG~S~Gg~~a~~~a~~-~p~~v~~lvl~~~~~~ 200 (268)
+-|||-|+.++..+..+ +..+|.|+++.++...
T Consensus 140 ~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~ 173 (270)
T KOG4627|consen 140 FGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYD 173 (270)
T ss_pred EcccchHHHHHHHHHHHhcCchHHHHHHHhhHhh
Confidence 89999999999987654 5568999999988653
No 164
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.40 E-value=0.0033 Score=55.82 Aligned_cols=100 Identities=16% Similarity=0.121 Sum_probs=74.4
Q ss_pred CcEEEECCCCCChhhHH---HhHHHHHhc--CeEEEEcCCCCCCCCccc----------ccCCHHHHHHHHHHHHHHhc-
Q 024392 99 SPVVLIHGFGASAFHWR---YNIPELAKR--YKVYAVDLLGFGWSEKAI----------IEYDAMVWKDQIVDFLKEIV- 162 (268)
Q Consensus 99 ~~vv~lHG~~~~~~~~~---~~~~~l~~~--~~v~~~d~~G~G~s~~~~----------~~~~~~~~~~~~~~~l~~~~- 162 (268)
.||+|.-|.-++-+.+. .++-.++.+ --++.+++|-||+|.+-. .-.+.++-.+|...++.++.
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~ 160 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKR 160 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhh
Confidence 68999999988887654 345555555 568889999999985421 11256666777777777763
Q ss_pred -----CCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCC
Q 024392 163 -----KEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSA 198 (268)
Q Consensus 163 -----~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~ 198 (268)
..+++.+|-|+||+++.++=.++|+.+.|...-+.+
T Consensus 161 ~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAP 201 (492)
T KOG2183|consen 161 DLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAP 201 (492)
T ss_pred ccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCc
Confidence 348999999999999999999999988776544443
No 165
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=97.27 E-value=0.014 Score=47.84 Aligned_cols=83 Identities=20% Similarity=0.247 Sum_probs=56.4
Q ss_pred CCcEEEECCCCCChhhHHHhHHHHHhcC-eEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHHhcCCCeEEEEeChHHH
Q 024392 98 GSPVVLIHGFGASAFHWRYNIPELAKRY-KVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVKEPAVLVGNSLGGF 176 (268)
Q Consensus 98 ~~~vv~lHG~~~~~~~~~~~~~~l~~~~-~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~lvG~S~Gg~ 176 (268)
...|||..||+.+...+.++. +.+.+ -++++|++.-- .+. | .-+.+++.|++||||-.
T Consensus 11 ~~LilfF~GWg~d~~~f~hL~--~~~~~D~l~~yDYr~l~--------~d~-----~------~~~y~~i~lvAWSmGVw 69 (213)
T PF04301_consen 11 KELILFFAGWGMDPSPFSHLI--LPENYDVLICYDYRDLD--------FDF-----D------LSGYREIYLVAWSMGVW 69 (213)
T ss_pred CeEEEEEecCCCChHHhhhcc--CCCCccEEEEecCcccc--------ccc-----c------cccCceEEEEEEeHHHH
Confidence 468999999999998776653 23343 35677887321 110 1 12457999999999998
Q ss_pred HHHHHHHhCCCccCeEEEecCCCCCCC
Q 024392 177 AALVAAVGLPDQVTGVALLNSAGQFGD 203 (268)
Q Consensus 177 ~a~~~a~~~p~~v~~lvl~~~~~~~~~ 203 (268)
+|..+....| ++.-|.+++.+.+..
T Consensus 70 ~A~~~l~~~~--~~~aiAINGT~~Pid 94 (213)
T PF04301_consen 70 AANRVLQGIP--FKRAIAINGTPYPID 94 (213)
T ss_pred HHHHHhccCC--cceeEEEECCCCCcC
Confidence 8888766543 677777888765544
No 166
>COG0627 Predicted esterase [General function prediction only]
Probab=97.27 E-value=0.00085 Score=58.57 Aligned_cols=58 Identities=17% Similarity=0.343 Sum_probs=44.3
Q ss_pred CCHHHH-HHHHHHHHHHhcC-----CCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCCCCC
Q 024392 145 YDAMVW-KDQIVDFLKEIVK-----EPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQFG 202 (268)
Q Consensus 145 ~~~~~~-~~~~~~~l~~~~~-----~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~ 202 (268)
+.++++ .+++.+.+++... ++..++||||||.-|+.+|.+||++++.+...++.....
T Consensus 127 ~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s 190 (316)
T COG0627 127 YQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPS 190 (316)
T ss_pred cchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceecccccccccc
Confidence 555554 4566655554432 278999999999999999999999999999888876544
No 167
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=97.13 E-value=0.017 Score=53.04 Aligned_cols=82 Identities=22% Similarity=0.194 Sum_probs=58.7
Q ss_pred hHHHHHhcCeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHHh-----cCCCeEEEEeChHHHHHHHHHHhCCCccCe
Q 024392 117 NIPELAKRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEI-----VKEPAVLVGNSLGGFAALVAAVGLPDQVTG 191 (268)
Q Consensus 117 ~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~-----~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~ 191 (268)
+-..|...+.||.+.+.- .+....+..+......++++++ +..|.+|+|.++||..++.+|+.+|+.+.-
T Consensus 93 vG~AL~~GHPvYFV~F~p-----~P~pgQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~gp 167 (581)
T PF11339_consen 93 VGVALRAGHPVYFVGFFP-----EPEPGQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDLVGP 167 (581)
T ss_pred HHHHHHcCCCeEEEEecC-----CCCCCCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCccCc
Confidence 344566667777776541 2334557777666555555544 234899999999999999999999999999
Q ss_pred EEEecCCCCCCC
Q 024392 192 VALLNSAGQFGD 203 (268)
Q Consensus 192 lvl~~~~~~~~~ 203 (268)
+|+-+++..+..
T Consensus 168 lvlaGaPlsywa 179 (581)
T PF11339_consen 168 LVLAGAPLSYWA 179 (581)
T ss_pred eeecCCCccccc
Confidence 998888766554
No 168
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.09 E-value=0.0017 Score=50.55 Aligned_cols=50 Identities=22% Similarity=0.280 Sum_probs=36.2
Q ss_pred HHHHHHHHHHh----cCCCeEEEEeChHHHHHHHHHHhCCC----ccCeEEEecCCCC
Q 024392 151 KDQIVDFLKEI----VKEPAVLVGNSLGGFAALVAAVGLPD----QVTGVALLNSAGQ 200 (268)
Q Consensus 151 ~~~~~~~l~~~----~~~~~~lvG~S~Gg~~a~~~a~~~p~----~v~~lvl~~~~~~ 200 (268)
.+.+...+++. ...+++++|||+||.+|..++..... ++..++..+++..
T Consensus 11 ~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~ 68 (153)
T cd00741 11 ANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRV 68 (153)
T ss_pred HHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCcc
Confidence 34444444443 45799999999999999998877644 5677888887654
No 169
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=97.00 E-value=0.0031 Score=54.64 Aligned_cols=84 Identities=27% Similarity=0.216 Sum_probs=48.6
Q ss_pred hHHHHHhcCeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHH---hc---CCCeEEEEeChHHHHHHHHHHh---C-C
Q 024392 117 NIPELAKRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKE---IV---KEPAVLVGNSLGGFAALVAAVG---L-P 186 (268)
Q Consensus 117 ~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~---~~---~~~~~lvG~S~Gg~~a~~~a~~---~-p 186 (268)
+...|.+.|.|+++|+.|.|.. .......-....+.+.+..+. .+ ..++.++|||.||.-+...+.. + |
T Consensus 19 l~~~L~~GyaVv~pDY~Glg~~-y~~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l~~~YAp 97 (290)
T PF03583_consen 19 LAAWLARGYAVVAPDYEGLGTP-YLNGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAELAPSYAP 97 (290)
T ss_pred HHHHHHCCCEEEecCCCCCCCc-ccCcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHHHhHHhCc
Confidence 3455666699999999999871 111111111222222222221 22 2489999999999988766643 2 4
Q ss_pred C-c--cCeEEEecCCCCC
Q 024392 187 D-Q--VTGVALLNSAGQF 201 (268)
Q Consensus 187 ~-~--v~~lvl~~~~~~~ 201 (268)
| . +.+.+..+++.+.
T Consensus 98 eL~~~l~Gaa~gg~~~dl 115 (290)
T PF03583_consen 98 ELNRDLVGAAAGGPPADL 115 (290)
T ss_pred ccccceeEEeccCCccCH
Confidence 4 2 6677766665543
No 170
>KOG3101 consensus Esterase D [General function prediction only]
Probab=96.97 E-value=0.00073 Score=54.72 Aligned_cols=105 Identities=16% Similarity=0.155 Sum_probs=66.9
Q ss_pred CCcEEEECCCCCChhhHHH---hHHHHHhc-CeEEEEcCCCCCC-----CCccc-----------------ccCCHHHH-
Q 024392 98 GSPVVLIHGFGASAFHWRY---NIPELAKR-YKVYAVDLLGFGW-----SEKAI-----------------IEYDAMVW- 150 (268)
Q Consensus 98 ~~~vv~lHG~~~~~~~~~~---~~~~l~~~-~~v~~~d~~G~G~-----s~~~~-----------------~~~~~~~~- 150 (268)
-|++.++.|+.-+.+.+.. +...-+++ ..|+.+|---.|- .+... ..+.+-++
T Consensus 44 ~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrMYdYv 123 (283)
T KOG3101|consen 44 CPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYRMYDYV 123 (283)
T ss_pred CceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhhHHHHH
Confidence 4688889999988876532 23334444 7888888543331 11100 11222222
Q ss_pred HHHHHHHHHH----hcCCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCCCCC
Q 024392 151 KDQIVDFLKE----IVKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQFG 202 (268)
Q Consensus 151 ~~~~~~~l~~----~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~ 202 (268)
.+++.+++.. ++..++.+.||||||.-|+..+.++|.+.+.+-..+|-.++.
T Consensus 124 ~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP~ 179 (283)
T KOG3101|consen 124 VKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNPI 179 (283)
T ss_pred HHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccCcc
Confidence 3344444442 234589999999999999999999999988888777765543
No 171
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=96.94 E-value=0.0035 Score=58.59 Aligned_cols=102 Identities=16% Similarity=0.122 Sum_probs=53.1
Q ss_pred CCcEEEECCCCCC---h--hhHHHhHHHHHhc-CeEEEEcCC----CCCCCCcc--c-ccCCHHHHH---HHHHHHHHHh
Q 024392 98 GSPVVLIHGFGAS---A--FHWRYNIPELAKR-YKVYAVDLL----GFGWSEKA--I-IEYDAMVWK---DQIVDFLKEI 161 (268)
Q Consensus 98 ~~~vv~lHG~~~~---~--~~~~~~~~~l~~~-~~v~~~d~~----G~G~s~~~--~-~~~~~~~~~---~~~~~~l~~~ 161 (268)
-|++|+|||.+.. . ..+. -...++++ .-||.+++| |+-.+... . ..+...|.. +.+.+-|...
T Consensus 125 lPV~v~ihGG~f~~G~~~~~~~~-~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~F 203 (535)
T PF00135_consen 125 LPVMVWIHGGGFMFGSGSFPPYD-GASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGLLDQRLALKWVQDNIAAF 203 (535)
T ss_dssp EEEEEEE--STTTSSCTTSGGGH-THHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHHHHHHHHHHHHHHHHGGGG
T ss_pred cceEEEeecccccCCCccccccc-ccccccCCCEEEEEecccccccccccccccccCchhhhhhhhHHHHHHHHhhhhhc
Confidence 3889999995532 2 2222 22334444 999999998 22222111 1 122222211 1222333334
Q ss_pred c--CCCeEEEEeChHHHHHHHHHHh--CCCccCeEEEecCCCC
Q 024392 162 V--KEPAVLVGNSLGGFAALVAAVG--LPDQVTGVALLNSAGQ 200 (268)
Q Consensus 162 ~--~~~~~lvG~S~Gg~~a~~~a~~--~p~~v~~lvl~~~~~~ 200 (268)
| .++|.|+|||-||..+..+... ....+.+.|+.++...
T Consensus 204 GGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~~ 246 (535)
T PF00135_consen 204 GGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSAL 246 (535)
T ss_dssp TEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--TT
T ss_pred ccCCcceeeeeecccccccceeeeccccccccccccccccccc
Confidence 4 4589999999999887776654 2357999999999653
No 172
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=96.88 E-value=0.0023 Score=52.31 Aligned_cols=99 Identities=16% Similarity=0.126 Sum_probs=70.0
Q ss_pred CcEEEECCCCCChh---hHHHhHHHHHhc-CeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHHhcC----CCeEEEE
Q 024392 99 SPVVLIHGFGASAF---HWRYNIPELAKR-YKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVK----EPAVLVG 170 (268)
Q Consensus 99 ~~vv~lHG~~~~~~---~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~lvG 170 (268)
--|||+-|++...- .-..+...|-+. |..+.+-.+.+- ......+..+.++|+..++++++. ++|+|+|
T Consensus 37 ~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy---~G~Gt~slk~D~edl~~l~~Hi~~~~fSt~vVL~G 113 (299)
T KOG4840|consen 37 VKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSY---NGYGTFSLKDDVEDLKCLLEHIQLCGFSTDVVLVG 113 (299)
T ss_pred EEEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccccc---cccccccccccHHHHHHHHHHhhccCcccceEEEe
Confidence 46888988876542 335566777777 999888766321 011234566668999999998752 3899999
Q ss_pred eChHHHHHHHHHHh--CCCccCeEEEecCCCC
Q 024392 171 NSLGGFAALVAAVG--LPDQVTGVALLNSAGQ 200 (268)
Q Consensus 171 ~S~Gg~~a~~~a~~--~p~~v~~lvl~~~~~~ 200 (268)
||.|..=.++|..+ .+..+.+.|+.+|..+
T Consensus 114 hSTGcQdi~yYlTnt~~~r~iraaIlqApVSD 145 (299)
T KOG4840|consen 114 HSTGCQDIMYYLTNTTKDRKIRAAILQAPVSD 145 (299)
T ss_pred cCccchHHHHHHHhccchHHHHHHHHhCccch
Confidence 99999988888733 3556788888888654
No 173
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=96.86 E-value=0.0053 Score=52.49 Aligned_cols=103 Identities=19% Similarity=0.161 Sum_probs=60.6
Q ss_pred CCCcEEEECCCCC--ChhhHHHhHHHHHhc----CeEEEEcCCCCCCCCcc-c----ccCCHHHHHHHHHHHHHHh----
Q 024392 97 EGSPVVLIHGFGA--SAFHWRYNIPELAKR----YKVYAVDLLGFGWSEKA-I----IEYDAMVWKDQIVDFLKEI---- 161 (268)
Q Consensus 97 ~~~~vv~lHG~~~--~~~~~~~~~~~l~~~----~~v~~~d~~G~G~s~~~-~----~~~~~~~~~~~~~~~l~~~---- 161 (268)
+-|++++.||-.. +...+..+-..+++. -.++.+|.-- .... . .......+++++.-.+++.
T Consensus 97 k~pvl~~~DG~~~~~~g~i~~~~dsli~~g~i~pai~vgid~~d---~~~R~~~~~~n~~~~~~L~~eLlP~v~~~yp~~ 173 (299)
T COG2382 97 KYPVLYLQDGQDWFRSGRIPRILDSLIAAGEIPPAILVGIDYID---VKKRREELHCNEAYWRFLAQELLPYVEERYPTS 173 (299)
T ss_pred cccEEEEeccHHHHhcCChHHHHHHHHHcCCCCCceEEecCCCC---HHHHHHHhcccHHHHHHHHHHhhhhhhccCccc
Confidence 3468899997321 222233333334443 3455555431 1111 1 1112233344444444432
Q ss_pred -cCCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCCCCC
Q 024392 162 -VKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQFG 202 (268)
Q Consensus 162 -~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~ 202 (268)
..+.-+|.|.|+||.+++..+..||+++..++..+|.....
T Consensus 174 ~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~~~ 215 (299)
T COG2382 174 ADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFWWT 215 (299)
T ss_pred ccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCccccC
Confidence 13467899999999999999999999999999999876443
No 174
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=96.78 E-value=0.003 Score=48.08 Aligned_cols=35 Identities=29% Similarity=0.406 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHhcCCCeEEEEeChHHHHHHHHHHh
Q 024392 150 WKDQIVDFLKEIVKEPAVLVGNSLGGFAALVAAVG 184 (268)
Q Consensus 150 ~~~~~~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~ 184 (268)
..+++..++++....++++.|||+||.+|..++..
T Consensus 50 ~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 50 ILDALKELVEKYPDYSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcccCccchhhccchHHHHHHHHHHh
Confidence 34445555554455689999999999999888765
No 175
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=96.72 E-value=0.019 Score=51.31 Aligned_cols=36 Identities=31% Similarity=0.362 Sum_probs=32.5
Q ss_pred CeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCCC
Q 024392 165 PAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQ 200 (268)
Q Consensus 165 ~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 200 (268)
|++++|+|.||+++...+.--|..+++++--++...
T Consensus 185 p~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~ 220 (403)
T PF11144_consen 185 PKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYAL 220 (403)
T ss_pred cEEEEecCcHHHHHHHHHhhCccceeEEEecCcccc
Confidence 899999999999999999999999999987777654
No 176
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=96.63 E-value=0.0063 Score=55.43 Aligned_cols=114 Identities=17% Similarity=0.077 Sum_probs=64.5
Q ss_pred CCeEEEEEEcc----CCCcEEEECCCCCC---h-hhHHHhHHHHHhc--CeEEEEcCCC--CCCCCc--------ccccC
Q 024392 86 RGHKIHYVVQG----EGSPVVLIHGFGAS---A-FHWRYNIPELAKR--YKVYAVDLLG--FGWSEK--------AIIEY 145 (268)
Q Consensus 86 ~g~~~~~~~~g----~~~~vv~lHG~~~~---~-~~~~~~~~~l~~~--~~v~~~d~~G--~G~s~~--------~~~~~ 145 (268)
|-..+..+... +.|++|+|||.+-. . +.+.. -..|+++ +-|+.+|+|= .|.-+. .....
T Consensus 78 DCL~LNIwaP~~~a~~~PVmV~IHGG~y~~Gs~s~~~yd-gs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~ 156 (491)
T COG2272 78 DCLYLNIWAPEVPAEKLPVMVYIHGGGYIMGSGSEPLYD-GSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNL 156 (491)
T ss_pred cceeEEeeccCCCCCCCcEEEEEeccccccCCCcccccC-hHHHHhcCCEEEEEeCcccccceeeehhhccccccccccc
Confidence 34455544332 34899999995532 2 22222 2344444 7888888872 121111 11112
Q ss_pred CHHHHH---HHHHHHHHHhc--CCCeEEEEeChHHHHHHHHHHh--CCCccCeEEEecCCCC
Q 024392 146 DAMVWK---DQIVDFLKEIV--KEPAVLVGNSLGGFAALVAAVG--LPDQVTGVALLNSAGQ 200 (268)
Q Consensus 146 ~~~~~~---~~~~~~l~~~~--~~~~~lvG~S~Gg~~a~~~a~~--~p~~v~~lvl~~~~~~ 200 (268)
...|.+ +.+.+-|++.| .++|.|+|+|-|++.++.+.+. ....+.++|+.++...
T Consensus 157 Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 157 GLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred cHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCCC
Confidence 222221 23334455555 4589999999999988877654 2235778888888765
No 177
>PLN02209 serine carboxypeptidase
Probab=96.61 E-value=0.054 Score=49.65 Aligned_cols=114 Identities=18% Similarity=0.215 Sum_probs=70.8
Q ss_pred CeEEEEEEcc------CCCcEEEECCCCCChhhHHHhHH-----------------------HHHhcCeEEEEcC-CCCC
Q 024392 87 GHKIHYVVQG------EGSPVVLIHGFGASAFHWRYNIP-----------------------ELAKRYKVYAVDL-LGFG 136 (268)
Q Consensus 87 g~~~~~~~~g------~~~~vv~lHG~~~~~~~~~~~~~-----------------------~l~~~~~v~~~d~-~G~G 136 (268)
+..+.|+-.. +.|.|+.+.|.+|.+..+..+.+ .+.+..+++.+|+ -|.|
T Consensus 51 ~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtG 130 (437)
T PLN02209 51 NVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTANIIFLDQPVGSG 130 (437)
T ss_pred CeEEEEEEEecCCCCCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhhcCcEEEecCCCCCC
Confidence 4667766543 35789999999988865432210 1223367999994 5788
Q ss_pred CCCccc--ccCCHHHHHHHHHHHHHHh-------cCCCeEEEEeChHHHHHHHHHHh----C------CCccCeEEEecC
Q 024392 137 WSEKAI--IEYDAMVWKDQIVDFLKEI-------VKEPAVLVGNSLGGFAALVAAVG----L------PDQVTGVALLNS 197 (268)
Q Consensus 137 ~s~~~~--~~~~~~~~~~~~~~~l~~~-------~~~~~~lvG~S~Gg~~a~~~a~~----~------p~~v~~lvl~~~ 197 (268)
.|-... ...+.++.++|+..++... ...++++.|.|+||..+-.+|.. . +-.++|+++.++
T Consensus 131 fSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng 210 (437)
T PLN02209 131 FSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNP 210 (437)
T ss_pred ccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCc
Confidence 874322 1122223456666666543 23489999999999866665542 2 124789998888
Q ss_pred CCC
Q 024392 198 AGQ 200 (268)
Q Consensus 198 ~~~ 200 (268)
..+
T Consensus 211 ~td 213 (437)
T PLN02209 211 ITH 213 (437)
T ss_pred ccC
Confidence 544
No 178
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=96.57 E-value=0.0063 Score=50.57 Aligned_cols=47 Identities=23% Similarity=0.263 Sum_probs=35.3
Q ss_pred HHHHHHHhcCCCeEEEEeChHHHHHHHHHHhC----CCccCeEEEecCCCCC
Q 024392 154 IVDFLKEIVKEPAVLVGNSLGGFAALVAAVGL----PDQVTGVALLNSAGQF 201 (268)
Q Consensus 154 ~~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~----p~~v~~lvl~~~~~~~ 201 (268)
+..+++..+ +++++.|||.||.+|...+... .++|..+...++++..
T Consensus 75 l~~~~~~~~-~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf~ 125 (224)
T PF11187_consen 75 LKKIAKKYP-GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGFS 125 (224)
T ss_pred HHHHHHhCC-CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCCC
Confidence 334444433 4699999999999999988773 4578999999997643
No 179
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=96.54 E-value=0.007 Score=49.95 Aligned_cols=52 Identities=23% Similarity=0.323 Sum_probs=38.2
Q ss_pred HHHHHHHHHHh---cCCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCCCCCC
Q 024392 151 KDQIVDFLKEI---VKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQFGD 203 (268)
Q Consensus 151 ~~~~~~~l~~~---~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~ 203 (268)
.++..+++... ..++|.|+|.|.||-+|+.+|..+| .|+++|.++|+.....
T Consensus 6 fe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~~~ 60 (213)
T PF08840_consen 6 FEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVVFQ 60 (213)
T ss_dssp HHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB--S
T ss_pred HHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeEec
Confidence 44555555544 2469999999999999999999999 7999999999875543
No 180
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=96.51 E-value=0.011 Score=52.41 Aligned_cols=83 Identities=23% Similarity=0.235 Sum_probs=62.8
Q ss_pred CcEEEECCCCCChhhHHHhHHHHHhc-CeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHHh----cCCCeEEEEeCh
Q 024392 99 SPVVLIHGFGASAFHWRYNIPELAKR-YKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEI----VKEPAVLVGNSL 173 (268)
Q Consensus 99 ~~vv~lHG~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~lvG~S~ 173 (268)
..-||+.|=++..+.=+...+.|.++ +.|+.+|-.-|=+|.+ +.++.++|+..+++.. +.+++.|+|+|+
T Consensus 261 ~~av~~SGDGGWr~lDk~v~~~l~~~gvpVvGvdsLRYfW~~r-----tPe~~a~Dl~r~i~~y~~~w~~~~~~liGySf 335 (456)
T COG3946 261 TVAVFYSGDGGWRDLDKEVAEALQKQGVPVVGVDSLRYFWSER-----TPEQIAADLSRLIRFYARRWGAKRVLLIGYSF 335 (456)
T ss_pred eEEEEEecCCchhhhhHHHHHHHHHCCCceeeeehhhhhhccC-----CHHHHHHHHHHHHHHHHHhhCcceEEEEeecc
Confidence 35688888887666556678889888 9999999877766654 5577788888888654 567999999999
Q ss_pred HHHHHHHHHHhCC
Q 024392 174 GGFAALVAAVGLP 186 (268)
Q Consensus 174 Gg~~a~~~a~~~p 186 (268)
|+-+--..-.+.|
T Consensus 336 GADvlP~~~n~L~ 348 (456)
T COG3946 336 GADVLPFAYNRLP 348 (456)
T ss_pred cchhhHHHHHhCC
Confidence 9876655544443
No 181
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=96.38 E-value=0.013 Score=48.02 Aligned_cols=120 Identities=16% Similarity=0.106 Sum_probs=75.0
Q ss_pred CceEEeeCCeEEEEEEccCCC-cEEEECCCCCChh-hHHHhHHHHHhc-CeEEEEcCC-CCCCCCc-cc-------ccCC
Q 024392 79 GYNFWTWRGHKIHYVVQGEGS-PVVLIHGFGASAF-HWRYNIPELAKR-YKVYAVDLL-GFGWSEK-AI-------IEYD 146 (268)
Q Consensus 79 ~~~~~~~~g~~~~~~~~g~~~-~vv~lHG~~~~~~-~~~~~~~~l~~~-~~v~~~d~~-G~G~s~~-~~-------~~~~ 146 (268)
+.+...++|..-++....+.+ .||++--+.+... .-+..+..++.+ |.|+++|+. |--++.. .. ...+
T Consensus 19 ~g~~~~v~gldaYv~gs~~~~~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~ 98 (242)
T KOG3043|consen 19 GGREEEVGGLDAYVVGSTSSKKVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHS 98 (242)
T ss_pred CCceEeecCeeEEEecCCCCCeEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCC
Confidence 445556666665554443333 6666666555443 466777888887 999999985 3112221 11 1122
Q ss_pred HHHHHHHHHHHHHHh---c-CCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCC
Q 024392 147 AMVWKDQIVDFLKEI---V-KEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAG 199 (268)
Q Consensus 147 ~~~~~~~~~~~l~~~---~-~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 199 (268)
....-.++..+++.+ + .++|.++|..|||-++..+....| .+.+.+..-|..
T Consensus 99 ~~~~~~~i~~v~k~lk~~g~~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~ 154 (242)
T KOG3043|consen 99 PPKIWKDITAVVKWLKNHGDSKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSF 154 (242)
T ss_pred cccchhHHHHHHHHHHHcCCcceeeEEEEeecceEEEEeeccch-hheeeeEecCCc
Confidence 223334555555444 4 568999999999999998888887 577777766654
No 182
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=96.21 E-value=0.022 Score=51.85 Aligned_cols=103 Identities=17% Similarity=0.205 Sum_probs=75.2
Q ss_pred CCCcEEEECCCCCChhhHHH----hHHHHHhc--CeEEEEcCCCCCCCCccc-------ccCCHHHHHHHHHHHHHHhc-
Q 024392 97 EGSPVVLIHGFGASAFHWRY----NIPELAKR--YKVYAVDLLGFGWSEKAI-------IEYDAMVWKDQIVDFLKEIV- 162 (268)
Q Consensus 97 ~~~~vv~lHG~~~~~~~~~~----~~~~l~~~--~~v~~~d~~G~G~s~~~~-------~~~~~~~~~~~~~~~l~~~~- 162 (268)
.+|.-|+|-|=+...+.|.. ....++++ -.|+..++|-||.|.+.. .-.+..+...|+..+|+++.
T Consensus 85 ~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n~ 164 (514)
T KOG2182|consen 85 GGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMNA 164 (514)
T ss_pred CCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHh
Confidence 56777777775554444521 23334444 789999999999885532 12356777888888888764
Q ss_pred ------CCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCC
Q 024392 163 ------KEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAG 199 (268)
Q Consensus 163 ------~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 199 (268)
..+++..|-|+-|.++.++=.++|+.+.|-|.-+++.
T Consensus 165 k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv 207 (514)
T KOG2182|consen 165 KFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPV 207 (514)
T ss_pred hcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccce
Confidence 1289999999999999999999999998888666654
No 183
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=96.19 E-value=0.068 Score=48.93 Aligned_cols=113 Identities=18% Similarity=0.225 Sum_probs=68.6
Q ss_pred CeEEEEEEcc------CCCcEEEECCCCCChhhHHHhH---H-------------H-------HHhcCeEEEEc-CCCCC
Q 024392 87 GHKIHYVVQG------EGSPVVLIHGFGASAFHWRYNI---P-------------E-------LAKRYKVYAVD-LLGFG 136 (268)
Q Consensus 87 g~~~~~~~~g------~~~~vv~lHG~~~~~~~~~~~~---~-------------~-------l~~~~~v~~~d-~~G~G 136 (268)
+..++|+-.. +.|.|+.+.|.+|.+..+..+. + . +.+..+++.+| .-|.|
T Consensus 49 ~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtG 128 (433)
T PLN03016 49 NVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKMANIIFLDQPVGSG 128 (433)
T ss_pred CeEEEEEEEecCCCcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhcCcEEEecCCCCCC
Confidence 4667776532 4578999999998776432111 0 1 22336799999 55888
Q ss_pred CCCcccc-cC-CHHHHHHHHHHHHHHh-------cCCCeEEEEeChHHHHHHHHHHh----C------CCccCeEEEecC
Q 024392 137 WSEKAII-EY-DAMVWKDQIVDFLKEI-------VKEPAVLVGNSLGGFAALVAAVG----L------PDQVTGVALLNS 197 (268)
Q Consensus 137 ~s~~~~~-~~-~~~~~~~~~~~~l~~~-------~~~~~~lvG~S~Gg~~a~~~a~~----~------p~~v~~lvl~~~ 197 (268)
.|..... .. +-.+.++++..++... ...++++.|.|+||..+-.+|.. . +-.++|+++-+|
T Consensus 129 fSy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg 208 (433)
T PLN03016 129 FSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNP 208 (433)
T ss_pred ccCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEecCC
Confidence 8854321 11 1112234555544432 24589999999999866666543 2 125789998887
Q ss_pred CC
Q 024392 198 AG 199 (268)
Q Consensus 198 ~~ 199 (268)
..
T Consensus 209 ~t 210 (433)
T PLN03016 209 VT 210 (433)
T ss_pred Cc
Confidence 54
No 184
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=96.12 E-value=0.025 Score=45.16 Aligned_cols=54 Identities=24% Similarity=0.215 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHHhc-----CCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCCCC
Q 024392 148 MVWKDQIVDFLKEIV-----KEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQF 201 (268)
Q Consensus 148 ~~~~~~~~~~l~~~~-----~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 201 (268)
+.-+.++.++++.+. ..++.++|||+|+.++-..+.+.+..++.+|++++++..
T Consensus 88 ~~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~g 146 (177)
T PF06259_consen 88 RAGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGMG 146 (177)
T ss_pred HHHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCCC
Confidence 344556666665542 348999999999999998888867789999999987643
No 185
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=96.10 E-value=0.013 Score=49.49 Aligned_cols=38 Identities=29% Similarity=0.460 Sum_probs=34.7
Q ss_pred cCCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCC
Q 024392 162 VKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAG 199 (268)
Q Consensus 162 ~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 199 (268)
+.++..++|||+||.+++.....+|+.+....+++|+.
T Consensus 135 ~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSl 172 (264)
T COG2819 135 NSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSL 172 (264)
T ss_pred CcccceeeeecchhHHHHHHHhcCcchhceeeeecchh
Confidence 34579999999999999999999999999999999974
No 186
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.09 E-value=0.068 Score=43.59 Aligned_cols=101 Identities=26% Similarity=0.332 Sum_probs=61.3
Q ss_pred CCcEEEECCCCCChh-hHH---------------HhHHH-HHhcCeEEEEcCCC---CCCCCcccccC--CHHHHHHH-H
Q 024392 98 GSPVVLIHGFGASAF-HWR---------------YNIPE-LAKRYKVYAVDLLG---FGWSEKAIIEY--DAMVWKDQ-I 154 (268)
Q Consensus 98 ~~~vv~lHG~~~~~~-~~~---------------~~~~~-l~~~~~v~~~d~~G---~G~s~~~~~~~--~~~~~~~~-~ 154 (268)
...+|++||.|.-.. .|. ++++. .+..|.|++.+.-. +-.+...+..+ +..+.+.- .
T Consensus 101 ~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~yvw 180 (297)
T KOG3967|consen 101 QKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKYVW 180 (297)
T ss_pred cceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHHHHH
Confidence 457999999775432 453 22333 34449999887541 11111111111 22222222 2
Q ss_pred HHHHHHhcCCCeEEEEeChHHHHHHHHHHhCCC--ccCeEEEecCC
Q 024392 155 VDFLKEIVKEPAVLVGNSLGGFAALVAAVGLPD--QVTGVALLNSA 198 (268)
Q Consensus 155 ~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~--~v~~lvl~~~~ 198 (268)
..++.....+.++++.||+||...+.+..++|+ +|-++.+.+++
T Consensus 181 ~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~ 226 (297)
T KOG3967|consen 181 KNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSA 226 (297)
T ss_pred HHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeeccc
Confidence 233333456789999999999999999999875 67788888876
No 187
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=96.07 E-value=0.054 Score=45.29 Aligned_cols=90 Identities=24% Similarity=0.299 Sum_probs=55.9
Q ss_pred cEEEECCCC--CCh-hhHHHhHHHHHhc-CeEEEEcCCCCCCCCcccccCCHHHHHHHH----HHHHHHh----cC----
Q 024392 100 PVVLIHGFG--ASA-FHWRYNIPELAKR-YKVYAVDLLGFGWSEKAIIEYDAMVWKDQI----VDFLKEI----VK---- 163 (268)
Q Consensus 100 ~vv~lHG~~--~~~-~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~----~~~l~~~----~~---- 163 (268)
+|=|+-|.. ... -.|+.+.+.|+++ |.|++.-+.- ..+....++++ ...++.+ +.
T Consensus 19 vihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~---------tfDH~~~A~~~~~~f~~~~~~L~~~~~~~~~~ 89 (250)
T PF07082_consen 19 VIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVV---------TFDHQAIAREVWERFERCLRALQKRGGLDPAY 89 (250)
T ss_pred EEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCC---------CCcHHHHHHHHHHHHHHHHHHHHHhcCCCccc
Confidence 455555532 222 3788899999988 9999987741 12222222222 2222222 21
Q ss_pred CCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCC
Q 024392 164 EPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSA 198 (268)
Q Consensus 164 ~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~ 198 (268)
-+++-+|||+|+-+-+.+...++..-++-|+++-.
T Consensus 90 lP~~~vGHSlGcklhlLi~s~~~~~r~gniliSFN 124 (250)
T PF07082_consen 90 LPVYGVGHSLGCKLHLLIGSLFDVERAGNILISFN 124 (250)
T ss_pred CCeeeeecccchHHHHHHhhhccCcccceEEEecC
Confidence 26888999999998888887776555777777764
No 188
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=96.03 E-value=0.066 Score=47.92 Aligned_cols=104 Identities=17% Similarity=0.152 Sum_probs=77.9
Q ss_pred CCCcEEEECCCCCChhhHHHhHHHHHhcCeEEEEcCCCCCCCCccc---ccCCHHHHHHHHHHHHHHhc---CCCeEEEE
Q 024392 97 EGSPVVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGWSEKAI---IEYDAMVWKDQIVDFLKEIV---KEPAVLVG 170 (268)
Q Consensus 97 ~~~~vv~lHG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~---~~~~~~~~~~~~~~~l~~~~---~~~~~lvG 170 (268)
+.|+|+..-|.+.+......-...|-+ -+-+.+++|-+|.|...+ ...++.+-++|..++++.+. .++++-.|
T Consensus 62 drPtV~~T~GY~~~~~p~r~Ept~Lld-~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY~~kWISTG 140 (448)
T PF05576_consen 62 DRPTVLYTEGYNVSTSPRRSEPTQLLD-GNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIYPGKWISTG 140 (448)
T ss_pred CCCeEEEecCcccccCccccchhHhhc-cceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhccCCceecC
Confidence 678999999988754322221122222 578899999999997754 34578888889887776653 56899999
Q ss_pred eChHHHHHHHHHHhCCCccCeEEEecCCCCC
Q 024392 171 NSLGGFAALVAAVGLPDQVTGVALLNSAGQF 201 (268)
Q Consensus 171 ~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 201 (268)
.|-||+.++.+=.-+|+.|++.|..-.+-+.
T Consensus 141 ~SKGGmTa~y~rrFyP~DVD~tVaYVAP~~~ 171 (448)
T PF05576_consen 141 GSKGGMTAVYYRRFYPDDVDGTVAYVAPNDV 171 (448)
T ss_pred cCCCceeEEEEeeeCCCCCCeeeeeeccccc
Confidence 9999999999888899999999877665543
No 189
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=95.97 E-value=0.02 Score=53.63 Aligned_cols=82 Identities=17% Similarity=0.106 Sum_probs=50.8
Q ss_pred hHHHhHHHHHhc-Ce-----EEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHHh----cCCCeEEEEeChHHHHHHHHH
Q 024392 113 HWRYNIPELAKR-YK-----VYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEI----VKEPAVLVGNSLGGFAALVAA 182 (268)
Q Consensus 113 ~~~~~~~~l~~~-~~-----v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~lvG~S~Gg~~a~~~a 182 (268)
.|..+++.|.+. |. ...+|+|-. ... ....+++-..+...++.. +.++++|+||||||.+++++.
T Consensus 157 vw~kLIe~L~~iGY~~~nL~gAPYDWRls---~~~--le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL 231 (642)
T PLN02517 157 VWAVLIANLARIGYEEKNMYMAAYDWRLS---FQN--TEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFM 231 (642)
T ss_pred eHHHHHHHHHHcCCCCCceeecccccccC---ccc--hhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHH
Confidence 467888888876 64 333455411 100 111233334455554432 357999999999999999987
Q ss_pred HhC-----------C----CccCeEEEecCCC
Q 024392 183 VGL-----------P----DQVTGVALLNSAG 199 (268)
Q Consensus 183 ~~~-----------p----~~v~~lvl~~~~~ 199 (268)
..- + +.|+++|.++++.
T Consensus 232 ~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~ 263 (642)
T PLN02517 232 KWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPF 263 (642)
T ss_pred HhccccccccCCcchHHHHHHHHHheeccccc
Confidence 632 1 2478999999863
No 190
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=95.92 E-value=0.013 Score=48.68 Aligned_cols=23 Identities=30% Similarity=0.413 Sum_probs=19.6
Q ss_pred cCCCeEEEEeChHHHHHHHHHHh
Q 024392 162 VKEPAVLVGNSLGGFAALVAAVG 184 (268)
Q Consensus 162 ~~~~~~lvG~S~Gg~~a~~~a~~ 184 (268)
...+++++|||+||.+|..++..
T Consensus 126 p~~~i~vtGHSLGGaiA~l~a~~ 148 (229)
T cd00519 126 PDYKIIVTGHSLGGALASLLALD 148 (229)
T ss_pred CCceEEEEccCHHHHHHHHHHHH
Confidence 34589999999999999988765
No 191
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=95.86 E-value=0.026 Score=45.19 Aligned_cols=75 Identities=20% Similarity=0.171 Sum_probs=43.2
Q ss_pred CeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHH----hcCCCeEEEEeChHHHHHHHHHHh--C----CCccCeEEE
Q 024392 125 YKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKE----IVKEPAVLVGNSLGGFAALVAAVG--L----PDQVTGVAL 194 (268)
Q Consensus 125 ~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~lvG~S~Gg~~a~~~a~~--~----p~~v~~lvl 194 (268)
..+..+++|-..... ....+...-++++...++. -...+++|+|+|+|+.++..++.. . .++|.++++
T Consensus 40 ~~~~~V~YpA~~~~~--~y~~S~~~G~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvl 117 (179)
T PF01083_consen 40 VAVQGVEYPASLGPN--SYGDSVAAGVANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVL 117 (179)
T ss_dssp EEEEE--S---SCGG--SCHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEE
T ss_pred eEEEecCCCCCCCcc--cccccHHHHHHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEE
Confidence 556667776432211 1111233334444444443 234589999999999999999877 2 357899999
Q ss_pred ecCCCCC
Q 024392 195 LNSAGQF 201 (268)
Q Consensus 195 ~~~~~~~ 201 (268)
++-+...
T Consensus 118 fGdP~~~ 124 (179)
T PF01083_consen 118 FGDPRRG 124 (179)
T ss_dssp ES-TTTB
T ss_pred ecCCccc
Confidence 8886653
No 192
>PLN02162 triacylglycerol lipase
Probab=95.75 E-value=0.031 Score=50.87 Aligned_cols=33 Identities=27% Similarity=0.319 Sum_probs=24.3
Q ss_pred HHHHHHHHHHhcCCCeEEEEeChHHHHHHHHHH
Q 024392 151 KDQIVDFLKEIVKEPAVLVGNSLGGFAALVAAV 183 (268)
Q Consensus 151 ~~~~~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~ 183 (268)
.+.+.+.+++....++++.|||+||.+|..++.
T Consensus 265 ~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 265 RQMLRDKLARNKNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHhCCCceEEEEecChHHHHHHHHHH
Confidence 344455555544558999999999999988764
No 193
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=95.69 E-value=0.042 Score=50.26 Aligned_cols=104 Identities=19% Similarity=0.135 Sum_probs=68.6
Q ss_pred CCCcEEEECCCCCChhhHHHhHHH-------------------HHhcCeEEEEc-CCCCCCCCc--ccccCCHHHHHHHH
Q 024392 97 EGSPVVLIHGFGASAFHWRYNIPE-------------------LAKRYKVYAVD-LLGFGWSEK--AIIEYDAMVWKDQI 154 (268)
Q Consensus 97 ~~~~vv~lHG~~~~~~~~~~~~~~-------------------l~~~~~v~~~d-~~G~G~s~~--~~~~~~~~~~~~~~ 154 (268)
++|.++.+.|.+|.+..|-.+.+. +-+.-.++-+| .-|.|.|.. .....+.....+|+
T Consensus 100 ~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~~e~~~d~~~~~~D~ 179 (498)
T COG2939 100 NRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALGDEKKKDFEGAGKDV 179 (498)
T ss_pred CCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCcccccccccccchhccchhH
Confidence 357899999999998877655321 11223689999 558888863 33334455555565
Q ss_pred HHHHHHh-------c--CCCeEEEEeChHHHHHHHHHHhCCC---ccCeEEEecCCCC
Q 024392 155 VDFLKEI-------V--KEPAVLVGNSLGGFAALVAAVGLPD---QVTGVALLNSAGQ 200 (268)
Q Consensus 155 ~~~l~~~-------~--~~~~~lvG~S~Gg~~a~~~a~~~p~---~v~~lvl~~~~~~ 200 (268)
..+.+.+ . ..+.+|+|.|+||+-+..+|..--+ ..++++.+++...
T Consensus 180 ~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvli 237 (498)
T COG2939 180 YSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVLI 237 (498)
T ss_pred HHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeeee
Confidence 5554432 2 2489999999999988888765333 4677777777544
No 194
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=95.66 E-value=0.11 Score=42.52 Aligned_cols=101 Identities=20% Similarity=0.127 Sum_probs=62.1
Q ss_pred CCcEEEECCCCCChhhHHH----hHHHHHhcCeEEEEcCCC--------------------------CCCCCccc----c
Q 024392 98 GSPVVLIHGFGASAFHWRY----NIPELAKRYKVYAVDLLG--------------------------FGWSEKAI----I 143 (268)
Q Consensus 98 ~~~vv~lHG~~~~~~~~~~----~~~~l~~~~~v~~~d~~G--------------------------~G~s~~~~----~ 143 (268)
.+-||++||+-.+.+.+.. +.+.+.+.+..+.+|-|- +||-.... .
T Consensus 5 k~rvLcLHGfrQsg~~F~~Ktg~~rK~l~k~~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~~~~ 84 (230)
T KOG2551|consen 5 KLRVLCLHGFRQSGKVFSEKTGSLRKLLKKLAELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEASFTE 84 (230)
T ss_pred CceEEEecchhhccHHHHHHhhhHHHHHHhhheEEecCCCccCCcccCCcccccccccCCcccccchhhhhccccccccc
Confidence 4679999999999887653 344455557777777652 01000000 0
Q ss_pred cCCHHHHHHHHHHHHHHhcCCCeEEEEeChHHHHHHHHHHh---------CCCccCeEEEecCCCC
Q 024392 144 EYDAMVWKDQIVDFLKEIVKEPAVLVGNSLGGFAALVAAVG---------LPDQVTGVALLNSAGQ 200 (268)
Q Consensus 144 ~~~~~~~~~~~~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~---------~p~~v~~lvl~~~~~~ 200 (268)
-...+.-.+.+.+.+.+.|+ =-.|+|+|.|+.++..++.. +| .++=+|++++...
T Consensus 85 ~~~~eesl~yl~~~i~enGP-FDGllGFSQGA~laa~l~~~~~~~~~~~~~P-~~kF~v~~SGf~~ 148 (230)
T KOG2551|consen 85 YFGFEESLEYLEDYIKENGP-FDGLLGFSQGAALAALLAGLGQKGLPYVKQP-PFKFAVFISGFKF 148 (230)
T ss_pred ccChHHHHHHHHHHHHHhCC-CccccccchhHHHHHHhhcccccCCcccCCC-CeEEEEEEecCCC
Confidence 11233345556666666652 12699999999999888872 22 3577788888643
No 195
>PLN00413 triacylglycerol lipase
Probab=95.58 E-value=0.04 Score=50.30 Aligned_cols=35 Identities=20% Similarity=0.325 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHhcCCCeEEEEeChHHHHHHHHHH
Q 024392 149 VWKDQIVDFLKEIVKEPAVLVGNSLGGFAALVAAV 183 (268)
Q Consensus 149 ~~~~~~~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~ 183 (268)
+..+.+.++++.....++++.|||+||++|..++.
T Consensus 269 ~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 269 TILRHLKEIFDQNPTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHH
Confidence 34556666666666668999999999999998874
No 196
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=95.54 E-value=0.026 Score=51.19 Aligned_cols=85 Identities=16% Similarity=0.102 Sum_probs=50.0
Q ss_pred hHHHhHHHHHhc-Ce------EEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHHhcCCCeEEEEeChHHHHHHHHHHhC
Q 024392 113 HWRYNIPELAKR-YK------VYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVKEPAVLVGNSLGGFAALVAAVGL 185 (268)
Q Consensus 113 ~~~~~~~~l~~~-~~------v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~ 185 (268)
.|..+++.|..- |. -..+|+|-.= ......+....++..-++...+.-|.+|++|++||||+.+.+++...+
T Consensus 125 ~w~~~i~~lv~~GYe~~~~l~ga~YDwRls~-~~~e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl~w~ 203 (473)
T KOG2369|consen 125 YWHELIENLVGIGYERGKTLFGAPYDWRLSY-HNSEERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFLKWV 203 (473)
T ss_pred HHHHHHHHHHhhCcccCceeeccccchhhcc-CChhHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHHhcc
Confidence 677788887654 33 3445666210 000011112222233333333334668999999999999999999888
Q ss_pred CC--------ccCeEEEecCC
Q 024392 186 PD--------QVTGVALLNSA 198 (268)
Q Consensus 186 p~--------~v~~lvl~~~~ 198 (268)
++ .+++.+-++++
T Consensus 204 ~~~~~~W~~k~I~sfvnig~p 224 (473)
T KOG2369|consen 204 EAEGPAWCDKYIKSFVNIGAP 224 (473)
T ss_pred cccchhHHHHHHHHHHccCch
Confidence 76 35666666654
No 197
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=95.23 E-value=0.48 Score=43.52 Aligned_cols=119 Identities=18% Similarity=0.148 Sum_probs=72.8
Q ss_pred EEeeC---CeEEEEEEcc------CCCcEEEECCCCCChhhHHHhHHH-------------------HHhcCeEEEEcCC
Q 024392 82 FWTWR---GHKIHYVVQG------EGSPVVLIHGFGASAFHWRYNIPE-------------------LAKRYKVYAVDLL 133 (268)
Q Consensus 82 ~~~~~---g~~~~~~~~g------~~~~vv~lHG~~~~~~~~~~~~~~-------------------l~~~~~v~~~d~~ 133 (268)
+++++ +..++|+-.. ..|.||.+.|.+|-+..- .+..+ +.+..+++.+|.|
T Consensus 48 Yv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~-G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfLd~P 126 (454)
T KOG1282|consen 48 YVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLG-GLFEENGPFRVKYNGKTLYLNPYSWNKEANILFLDQP 126 (454)
T ss_pred eEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchh-hhhhhcCCeEEcCCCCcceeCCccccccccEEEEecC
Confidence 45555 7889887543 357899999999877432 22111 1222468888887
Q ss_pred -CCCCCCccc-c--cCCHHHHHHHHHHHHHH----h---cCCCeEEEEeChHHHHHHHHHH----hCC------CccCeE
Q 024392 134 -GFGWSEKAI-I--EYDAMVWKDQIVDFLKE----I---VKEPAVLVGNSLGGFAALVAAV----GLP------DQVTGV 192 (268)
Q Consensus 134 -G~G~s~~~~-~--~~~~~~~~~~~~~~l~~----~---~~~~~~lvG~S~Gg~~a~~~a~----~~p------~~v~~l 192 (268)
|.|.|-... . ..+-+..++|...++.. . ..+++++.|.|++|...-.+|. .+. -.++|+
T Consensus 127 vGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~ 206 (454)
T KOG1282|consen 127 VGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGY 206 (454)
T ss_pred CcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceEE
Confidence 677774322 1 12334445555544432 2 2458999999999976655554 221 247898
Q ss_pred EEecCCCCC
Q 024392 193 ALLNSAGQF 201 (268)
Q Consensus 193 vl~~~~~~~ 201 (268)
++-+|..+.
T Consensus 207 ~IGNg~td~ 215 (454)
T KOG1282|consen 207 AIGNGLTDP 215 (454)
T ss_pred EecCcccCc
Confidence 887776543
No 198
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=95.14 E-value=0.04 Score=40.55 Aligned_cols=37 Identities=22% Similarity=0.352 Sum_probs=23.6
Q ss_pred eEEeeCCeEEEEEEcc----CCCcEEEECCCCCChhhHHHh
Q 024392 81 NFWTWRGHKIHYVVQG----EGSPVVLIHGFGASAFHWRYN 117 (268)
Q Consensus 81 ~~~~~~g~~~~~~~~g----~~~~vv~lHG~~~~~~~~~~~ 117 (268)
...+++|..+|+.... +..|||++||++++-..|..+
T Consensus 71 f~t~I~g~~iHFih~rs~~~~aiPLll~HGWPgSf~Ef~~v 111 (112)
T PF06441_consen 71 FKTEIDGLDIHFIHVRSKRPNAIPLLLLHGWPGSFLEFLKV 111 (112)
T ss_dssp EEEEETTEEEEEEEE--S-TT-EEEEEE--SS--GGGGHHH
T ss_pred eeEEEeeEEEEEEEeeCCCCCCeEEEEECCCCccHHhHHhh
Confidence 3458899999987653 335899999999987766543
No 199
>PLN02454 triacylglycerol lipase
Probab=95.11 E-value=0.04 Score=49.64 Aligned_cols=20 Identities=45% Similarity=0.534 Sum_probs=17.7
Q ss_pred CeEEEEeChHHHHHHHHHHh
Q 024392 165 PAVLVGNSLGGFAALVAAVG 184 (268)
Q Consensus 165 ~~~lvG~S~Gg~~a~~~a~~ 184 (268)
+|+++|||+||.+|...|..
T Consensus 229 sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 229 SIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred eEEEEecCHHHHHHHHHHHH
Confidence 39999999999999998854
No 200
>PLN02571 triacylglycerol lipase
Probab=95.10 E-value=0.036 Score=49.96 Aligned_cols=37 Identities=22% Similarity=0.277 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHhcCC--CeEEEEeChHHHHHHHHHHh
Q 024392 148 MVWKDQIVDFLKEIVKE--PAVLVGNSLGGFAALVAAVG 184 (268)
Q Consensus 148 ~~~~~~~~~~l~~~~~~--~~~lvG~S~Gg~~a~~~a~~ 184 (268)
++..+++..+++....+ +++++|||+||.+|...|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 34455666666655433 68999999999999988764
No 201
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=95.03 E-value=0.016 Score=53.95 Aligned_cols=122 Identities=14% Similarity=0.079 Sum_probs=79.5
Q ss_pred CCceEEeeCCeEEEEEEcc------CCCcEEEECCCCCChh--hHHHhHHH-HHhcCeEEEEcCCCCCCCCccc----cc
Q 024392 78 EGYNFWTWRGHKIHYVVQG------EGSPVVLIHGFGASAF--HWRYNIPE-LAKRYKVYAVDLLGFGWSEKAI----IE 144 (268)
Q Consensus 78 ~~~~~~~~~g~~~~~~~~g------~~~~vv~lHG~~~~~~--~~~~~~~~-l~~~~~v~~~d~~G~G~s~~~~----~~ 144 (268)
++.....-||.+++|...+ +.|++|+--|...-+. .|.+.... |.+....+..+.||-|.-.... ..
T Consensus 395 eQ~~atSkDGT~IPYFiv~K~~~~d~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~k 474 (648)
T COG1505 395 EQFFATSKDGTRIPYFIVRKGAKKDENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEWHQAGMK 474 (648)
T ss_pred EEEEEEcCCCccccEEEEecCCcCCCCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHHHHHHhh
Confidence 3444456799999987663 2456666555333222 44454444 4555888889999988665432 11
Q ss_pred CCHHHHHHHHHHHHHHh---c---CCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCC
Q 024392 145 YDAMVWKDQIVDFLKEI---V---KEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAG 199 (268)
Q Consensus 145 ~~~~~~~~~~~~~l~~~---~---~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 199 (268)
.+-....+|..++.+.+ + ++++.+.|-|.||.+.-....+.|+.+.++|+--|..
T Consensus 475 ~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPll 535 (648)
T COG1505 475 ENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLL 535 (648)
T ss_pred hcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccchh
Confidence 22233345555555554 3 3588999999999999888899999999888766643
No 202
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=95.01 E-value=0.16 Score=51.16 Aligned_cols=96 Identities=17% Similarity=0.236 Sum_probs=67.7
Q ss_pred CCCcEEEECCCCCChhhHHHhHHHHHhcCeEEEEcCCCCCCC-CcccccCCHHHHHHHHHHHHHHhcC-CCeEEEEeChH
Q 024392 97 EGSPVVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGWS-EKAIIEYDAMVWKDQIVDFLKEIVK-EPAVLVGNSLG 174 (268)
Q Consensus 97 ~~~~vv~lHG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s-~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~lvG~S~G 174 (268)
++|+++|+|-+-+.....+.++..|. .|-||.. .......++++.+.-..+-++++.+ .+..++|+|+|
T Consensus 2122 e~~~~Ffv~pIEG~tt~l~~la~rle---------~PaYglQ~T~~vP~dSies~A~~yirqirkvQP~GPYrl~GYSyG 2192 (2376)
T KOG1202|consen 2122 EEPPLFFVHPIEGFTTALESLASRLE---------IPAYGLQCTEAVPLDSIESLAAYYIRQIRKVQPEGPYRLAGYSYG 2192 (2376)
T ss_pred cCCceEEEeccccchHHHHHHHhhcC---------CcchhhhccccCCcchHHHHHHHHHHHHHhcCCCCCeeeeccchh
Confidence 57899999998887766665554432 2344422 2223345677777777777777765 48999999999
Q ss_pred HHHHHHHHHhC--CCccCeEEEecCCCCC
Q 024392 175 GFAALVAAVGL--PDQVTGVALLNSAGQF 201 (268)
Q Consensus 175 g~~a~~~a~~~--p~~v~~lvl~~~~~~~ 201 (268)
+.++..++... .+..+.+|++++++.+
T Consensus 2193 ~~l~f~ma~~Lqe~~~~~~lillDGspty 2221 (2376)
T KOG1202|consen 2193 ACLAFEMASQLQEQQSPAPLILLDGSPTY 2221 (2376)
T ss_pred HHHHHHHHHHHHhhcCCCcEEEecCchHH
Confidence 99999988653 3346779999998643
No 203
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=94.88 E-value=0.065 Score=43.80 Aligned_cols=66 Identities=14% Similarity=0.077 Sum_probs=41.7
Q ss_pred HHHhcCeEEEEcCCCCCCCCcc---------cccCCHHHHHHHHHHHHHHhcC-CCeEEEEeChHHHHHHHHHHhC
Q 024392 120 ELAKRYKVYAVDLLGFGWSEKA---------IIEYDAMVWKDQIVDFLKEIVK-EPAVLVGNSLGGFAALVAAVGL 185 (268)
Q Consensus 120 ~l~~~~~v~~~d~~G~G~s~~~---------~~~~~~~~~~~~~~~~l~~~~~-~~~~lvG~S~Gg~~a~~~a~~~ 185 (268)
.+.+..+|+++-+|-....... .......|..+....++++.+. ++++|+|||+|+.+..++..+.
T Consensus 41 ~F~~~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 41 AFNGVCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred hhhcCCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 3444478888877743211111 1122334444555566666644 5899999999999999998864
No 204
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=94.86 E-value=0.036 Score=49.39 Aligned_cols=84 Identities=23% Similarity=0.269 Sum_probs=49.1
Q ss_pred CcEEEECCCCC-ChhhHHHhHHHHHhcCeEEEEcCCCCCCC-Ccccc--cCCHHHHHHHHHHHHHHhcCCCeEEEEeChH
Q 024392 99 SPVVLIHGFGA-SAFHWRYNIPELAKRYKVYAVDLLGFGWS-EKAII--EYDAMVWKDQIVDFLKEIVKEPAVLVGNSLG 174 (268)
Q Consensus 99 ~~vv~lHG~~~-~~~~~~~~~~~l~~~~~v~~~d~~G~G~s-~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~lvG~S~G 174 (268)
-.||+.||+-+ +...|...+......+.=..+..+|+-.. ..+.. ..=-...++++.+.+....++++..+|||+|
T Consensus 81 HLvVlthGi~~~~~~~~~~~~~~~~kk~p~~~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~~si~kISfvghSLG 160 (405)
T KOG4372|consen 81 HLVVLTHGLHGADMEYWKEKIEQMTKKMPDKLIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYDYSIEKISFVGHSLG 160 (405)
T ss_pred eEEEeccccccccHHHHHHHHHhhhcCCCcceEeeeccccchhhccccceeeecccHHHHhhhhhccccceeeeeeeecC
Confidence 36999999888 56677777776666633224444443211 11110 1111223445555555455789999999999
Q ss_pred HHHHHHHH
Q 024392 175 GFAALVAA 182 (268)
Q Consensus 175 g~~a~~~a 182 (268)
|.++..+.
T Consensus 161 GLvar~AI 168 (405)
T KOG4372|consen 161 GLVARYAI 168 (405)
T ss_pred CeeeeEEE
Confidence 98876543
No 205
>PLN02408 phospholipase A1
Probab=94.68 E-value=0.057 Score=47.97 Aligned_cols=34 Identities=26% Similarity=0.425 Sum_probs=24.9
Q ss_pred HHHHHHHHHHhcCC--CeEEEEeChHHHHHHHHHHh
Q 024392 151 KDQIVDFLKEIVKE--PAVLVGNSLGGFAALVAAVG 184 (268)
Q Consensus 151 ~~~~~~~l~~~~~~--~~~lvG~S~Gg~~a~~~a~~ 184 (268)
.+++..+++....+ +|++.|||+||.+|...|..
T Consensus 185 l~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 185 REEIARLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 44555556554433 59999999999999988764
No 206
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=94.54 E-value=0.2 Score=47.41 Aligned_cols=118 Identities=17% Similarity=0.115 Sum_probs=74.3
Q ss_pred eCCeEEE----EEE----ccCCCcEEEECCCCCChh--hHHHhHHHHHhc-CeEEEEcCCCCCCCCcc--------cccC
Q 024392 85 WRGHKIH----YVV----QGEGSPVVLIHGFGASAF--HWRYNIPELAKR-YKVYAVDLLGFGWSEKA--------IIEY 145 (268)
Q Consensus 85 ~~g~~~~----~~~----~g~~~~vv~lHG~~~~~~--~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~--------~~~~ 145 (268)
.||..+. |.. .|+.|.+|+--|.-+... .+....-.|.++ +---....||-|.-... ....
T Consensus 427 ~dgv~VPVSLvyrkd~~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK~l~K~N 506 (682)
T COG1770 427 DDGVQVPVSLVYRKDTKLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYEDGKLLNKKN 506 (682)
T ss_pred CCCcEeeEEEEEecccCCCCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHHHHhhhhhhccc
Confidence 4676554 332 245566777666544432 222222224444 44444556776544322 2345
Q ss_pred CHHHHHHHHHHHHHHh--cCCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCCCCC
Q 024392 146 DAMVWKDQIVDFLKEI--VKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQFG 202 (268)
Q Consensus 146 ~~~~~~~~~~~~l~~~--~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~ 202 (268)
++.|+.+....++++= ..++++++|-|-||++.-..+.+.|+.++++|.--|..+.-
T Consensus 507 Tf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDvl 565 (682)
T COG1770 507 TFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDVL 565 (682)
T ss_pred cHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccchh
Confidence 6766666666666542 24589999999999999999999999999999888866543
No 207
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=94.52 E-value=0.038 Score=51.87 Aligned_cols=104 Identities=13% Similarity=0.030 Sum_probs=66.1
Q ss_pred cCCCcEEEECCCCCCh-h-hHHHhHHHHHhc-CeEEEEcCCCCCCCCcc--------cccCCHHHHHHHHHHHHHH--hc
Q 024392 96 GEGSPVVLIHGFGASA-F-HWRYNIPELAKR-YKVYAVDLLGFGWSEKA--------IIEYDAMVWKDQIVDFLKE--IV 162 (268)
Q Consensus 96 g~~~~vv~lHG~~~~~-~-~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~--------~~~~~~~~~~~~~~~~l~~--~~ 162 (268)
|+.|.+|+.+|.-+-+ . .|..--.-|.++ +.....|.||-|.-... .....++++.....-+++. ..
T Consensus 468 g~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~gyt~ 547 (712)
T KOG2237|consen 468 GSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENGYTQ 547 (712)
T ss_pred CCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHHHcCCCC
Confidence 4567666666644322 1 333222223334 77778899997754332 1233455555555444443 13
Q ss_pred CCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCC
Q 024392 163 KEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAG 199 (268)
Q Consensus 163 ~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 199 (268)
.++..+.|.|.||.++..+..++|+.+.++|+--|..
T Consensus 548 ~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~Vpfm 584 (712)
T KOG2237|consen 548 PSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFM 584 (712)
T ss_pred ccceeEecccCccchhHHHhccCchHhhhhhhcCcce
Confidence 5689999999999999999999999999888766643
No 208
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=94.39 E-value=0.12 Score=40.82 Aligned_cols=111 Identities=15% Similarity=0.182 Sum_probs=64.5
Q ss_pred eEEEEEEcc-CCCcEEEECCCCCChhhHHH------hHHHHHhc-CeEEEEcCCCCCCCCcccccCCHHH---HHHHHHH
Q 024392 88 HKIHYVVQG-EGSPVVLIHGFGASAFHWRY------NIPELAKR-YKVYAVDLLGFGWSEKAIIEYDAMV---WKDQIVD 156 (268)
Q Consensus 88 ~~~~~~~~g-~~~~vv~lHG~~~~~~~~~~------~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~---~~~~~~~ 156 (268)
..+.+...| .+.+||+.+--++.-..|.. +...+.+. ...+++|-- ...+--....+..+ ..+...+
T Consensus 15 RdMel~ryGHaG~pVvvFpts~Grf~eyed~G~v~ala~fie~G~vQlft~~gl--dsESf~a~h~~~adr~~rH~Ayer 92 (227)
T COG4947 15 RDMELNRYGHAGIPVVVFPTSGGRFNEYEDFGMVDALASFIEEGLVQLFTLSGL--DSESFLATHKNAADRAERHRAYER 92 (227)
T ss_pred chhhhhhccCCCCcEEEEecCCCcchhhhhcccHHHHHHHHhcCcEEEEEeccc--chHhHhhhcCCHHHHHHHHHHHHH
Confidence 445566666 45567777766665555443 23344444 555555532 11110001111111 1233333
Q ss_pred HH-HHhcCCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCCC
Q 024392 157 FL-KEIVKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQ 200 (268)
Q Consensus 157 ~l-~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 200 (268)
.+ ++.-+.+..+-|.||||..|..+.-+||+.+.++|.+++..+
T Consensus 93 Yv~eEalpgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYd 137 (227)
T COG4947 93 YVIEEALPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYD 137 (227)
T ss_pred HHHHhhcCCCccccccchhhhhhhhhheeChhHhhhheeecceee
Confidence 33 333345678899999999999999999999999999998653
No 209
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=94.34 E-value=0.42 Score=40.40 Aligned_cols=101 Identities=16% Similarity=0.073 Sum_probs=62.0
Q ss_pred CCCcEEEECCCCCChhhHH-HhHHHHHhc-CeEEEEcCCCCCCCCcccccCCHHHHHHHHH----HHHH----------H
Q 024392 97 EGSPVVLIHGFGASAFHWR-YNIPELAKR-YKVYAVDLLGFGWSEKAIIEYDAMVWKDQIV----DFLK----------E 160 (268)
Q Consensus 97 ~~~~vv~lHG~~~~~~~~~-~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~----~~l~----------~ 160 (268)
.++..|.+-|.+.+...-. .+.+.+..+ ...+.++-|-||+......-...-+.+.|+. +.|+ .
T Consensus 112 ~~~KOG~~a~tgdh~y~rr~~L~~p~~k~~i~tmvle~pfYgqr~p~~q~~~~Le~vtDlf~mG~A~I~E~~~lf~Ws~~ 191 (371)
T KOG1551|consen 112 MADLCLSWALTGDHVYTRRLVLSKPINKREIATMVLEKPFYGQRVPEEQIIHMLEYVTDLFKMGRATIQEFVKLFTWSSA 191 (371)
T ss_pred cCCeeEEEeecCCceeEeeeeecCchhhhcchheeeecccccccCCHHHHHHHHHHHHHHHHhhHHHHHHHHHhcccccc
Confidence 4556677777776654322 233444444 8888999999998765432222222223321 1111 1
Q ss_pred hcCCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecC
Q 024392 161 IVKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNS 197 (268)
Q Consensus 161 ~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~ 197 (268)
.|..+..++|-||||.+|......|+.-|+-+=++++
T Consensus 192 ~g~g~~~~~g~Smgg~~a~~vgS~~q~Pva~~p~l~~ 228 (371)
T KOG1551|consen 192 DGLGNLNLVGRSMGGDIANQVGSLHQKPVATAPCLNS 228 (371)
T ss_pred cCcccceeeeeecccHHHHhhcccCCCCccccccccc
Confidence 2456999999999999999999988766655544444
No 210
>PLN02934 triacylglycerol lipase
Probab=94.13 E-value=0.083 Score=48.68 Aligned_cols=34 Identities=29% Similarity=0.436 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHhcCCCeEEEEeChHHHHHHHHHH
Q 024392 150 WKDQIVDFLKEIVKEPAVLVGNSLGGFAALVAAV 183 (268)
Q Consensus 150 ~~~~~~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~ 183 (268)
..+.+.+++++....++++.|||+||.+|..++.
T Consensus 307 v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 307 VRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 3445556666555568999999999999998874
No 211
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=93.90 E-value=0.061 Score=35.16 Aligned_cols=38 Identities=29% Similarity=0.328 Sum_probs=22.1
Q ss_pred CCCceEEeeCCeEEEEEEc--c--------CCCcEEEECCCCCChhhH
Q 024392 77 PEGYNFWTWRGHKIHYVVQ--G--------EGSPVVLIHGFGASAFHW 114 (268)
Q Consensus 77 ~~~~~~~~~~g~~~~~~~~--g--------~~~~vv~lHG~~~~~~~~ 114 (268)
.+.....|-||+-+..... + ++|+|++.||+.++++.|
T Consensus 12 ~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~w 59 (63)
T PF04083_consen 12 CEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDW 59 (63)
T ss_dssp -EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGG
T ss_pred cEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHH
Confidence 3445567889988876542 1 357999999999999887
No 212
>PLN02310 triacylglycerol lipase
Probab=93.80 E-value=0.19 Score=45.27 Aligned_cols=36 Identities=22% Similarity=0.266 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHhc---C-CCeEEEEeChHHHHHHHHHHh
Q 024392 149 VWKDQIVDFLKEIV---K-EPAVLVGNSLGGFAALVAAVG 184 (268)
Q Consensus 149 ~~~~~~~~~l~~~~---~-~~~~lvG~S~Gg~~a~~~a~~ 184 (268)
+..+++..+++... . -++.++|||+||.+|...|..
T Consensus 190 qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 190 QVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 34455666665542 2 379999999999999988753
No 213
>PLN02324 triacylglycerol lipase
Probab=93.78 E-value=0.11 Score=46.88 Aligned_cols=34 Identities=18% Similarity=0.342 Sum_probs=24.2
Q ss_pred HHHHHHHHHHhcC--CCeEEEEeChHHHHHHHHHHh
Q 024392 151 KDQIVDFLKEIVK--EPAVLVGNSLGGFAALVAAVG 184 (268)
Q Consensus 151 ~~~~~~~l~~~~~--~~~~lvG~S~Gg~~a~~~a~~ 184 (268)
.+++..+++.... -+|.++|||+||.+|...|..
T Consensus 200 l~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 200 QGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 3445555554433 269999999999999988753
No 214
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=93.73 E-value=0.22 Score=44.03 Aligned_cols=39 Identities=28% Similarity=0.407 Sum_probs=30.9
Q ss_pred cCCCeEEEEeChHHHHHHHHHHhCCC-----ccCeEEEecCCCC
Q 024392 162 VKEPAVLVGNSLGGFAALVAAVGLPD-----QVTGVALLNSAGQ 200 (268)
Q Consensus 162 ~~~~~~lvG~S~Gg~~a~~~a~~~p~-----~v~~lvl~~~~~~ 200 (268)
+.+++.|+|||+|+.+.........+ .|+.+++++++..
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~ 261 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVP 261 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCC
Confidence 56689999999999998887765443 3899999987653
No 215
>PLN02802 triacylglycerol lipase
Probab=93.58 E-value=0.11 Score=47.78 Aligned_cols=35 Identities=20% Similarity=0.242 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHhcC--CCeEEEEeChHHHHHHHHHHh
Q 024392 150 WKDQIVDFLKEIVK--EPAVLVGNSLGGFAALVAAVG 184 (268)
Q Consensus 150 ~~~~~~~~l~~~~~--~~~~lvG~S~Gg~~a~~~a~~ 184 (268)
..+++..+++.... .+|++.|||+||.+|...|..
T Consensus 314 Vl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 314 VVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 34445555554432 268999999999999987764
No 216
>PLN02753 triacylglycerol lipase
Probab=93.16 E-value=0.15 Score=47.29 Aligned_cols=34 Identities=24% Similarity=0.337 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHhcC-----CCeEEEEeChHHHHHHHHHH
Q 024392 150 WKDQIVDFLKEIVK-----EPAVLVGNSLGGFAALVAAV 183 (268)
Q Consensus 150 ~~~~~~~~l~~~~~-----~~~~lvG~S~Gg~~a~~~a~ 183 (268)
..+.+..+++.... -+|.++|||+||.+|...|.
T Consensus 293 Vl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 293 ILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred HHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHH
Confidence 34445555554432 38999999999999998875
No 217
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=93.00 E-value=0.43 Score=44.31 Aligned_cols=84 Identities=21% Similarity=0.241 Sum_probs=57.2
Q ss_pred hHHHHHhcCeEEEEcCCCCCCCCc---ccccCCHHHHHH-----------HHHHHHHHh---cCCCeEEEEeChHHHHHH
Q 024392 117 NIPELAKRYKVYAVDLLGFGWSEK---AIIEYDAMVWKD-----------QIVDFLKEI---VKEPAVLVGNSLGGFAAL 179 (268)
Q Consensus 117 ~~~~l~~~~~v~~~d~~G~G~s~~---~~~~~~~~~~~~-----------~~~~~l~~~---~~~~~~lvG~S~Gg~~a~ 179 (268)
+...+++.|.++.-|- ||..+.. .....+.+.+.+ --.++++.. ..++-+..|.|.||.-++
T Consensus 52 ~~~~~~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl 130 (474)
T PF07519_consen 52 MATALARGYATASTDS-GHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGL 130 (474)
T ss_pred cchhhhcCeEEEEecC-CCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHH
Confidence 4566777799999996 6654432 111223322221 122333332 356789999999999999
Q ss_pred HHHHhCCCccCeEEEecCCCCC
Q 024392 180 VAAVGLPDQVTGVALLNSAGQF 201 (268)
Q Consensus 180 ~~a~~~p~~v~~lvl~~~~~~~ 201 (268)
..|+++|+.++|++.-+|+.++
T Consensus 131 ~~AQryP~dfDGIlAgaPA~~~ 152 (474)
T PF07519_consen 131 MAAQRYPEDFDGILAGAPAINW 152 (474)
T ss_pred HHHHhChhhcCeEEeCCchHHH
Confidence 9999999999999998887654
No 218
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=92.85 E-value=0.4 Score=45.22 Aligned_cols=104 Identities=14% Similarity=0.036 Sum_probs=57.4
Q ss_pred CCcEEEECCCCCChh---hH--HHhHHHHHhc-CeEEEEcCC----CCCCCCc--ccccCCHHHHHH---HHHHHHHHhc
Q 024392 98 GSPVVLIHGFGASAF---HW--RYNIPELAKR-YKVYAVDLL----GFGWSEK--AIIEYDAMVWKD---QIVDFLKEIV 162 (268)
Q Consensus 98 ~~~vv~lHG~~~~~~---~~--~~~~~~l~~~-~~v~~~d~~----G~G~s~~--~~~~~~~~~~~~---~~~~~l~~~~ 162 (268)
-|++|++||.+-... .+ ......+..+ .-|+.+.+| |+..... .+..+...|+.. .+.+-|...|
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~gl~Dq~~AL~wv~~~I~~FG 191 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLGLFDQLLALRWVKDNIPSFG 191 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCcccHHHHHHHHHHHHHHHHhcC
Confidence 588999999764322 22 1112223333 667777766 2222211 123334433322 2333444444
Q ss_pred --CCCeEEEEeChHHHHHHHHHHh--CCCccCeEEEecCCCCC
Q 024392 163 --KEPAVLVGNSLGGFAALVAAVG--LPDQVTGVALLNSAGQF 201 (268)
Q Consensus 163 --~~~~~lvG~S~Gg~~a~~~a~~--~p~~v~~lvl~~~~~~~ 201 (268)
.++|.++|||.||..+..+... ....+.+.|..++....
T Consensus 192 Gdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~~~ 234 (545)
T KOG1516|consen 192 GDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNALS 234 (545)
T ss_pred CCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhcccccc
Confidence 5689999999999988766542 12456777777776543
No 219
>PLN03037 lipase class 3 family protein; Provisional
Probab=92.78 E-value=0.17 Score=46.72 Aligned_cols=36 Identities=22% Similarity=0.311 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHhc---C-CCeEEEEeChHHHHHHHHHHh
Q 024392 149 VWKDQIVDFLKEIV---K-EPAVLVGNSLGGFAALVAAVG 184 (268)
Q Consensus 149 ~~~~~~~~~l~~~~---~-~~~~lvG~S~Gg~~a~~~a~~ 184 (268)
+..+++..+++... . .++.+.|||+||.+|...|..
T Consensus 299 QVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 299 QVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 34456666665543 2 269999999999999988753
No 220
>PLN02719 triacylglycerol lipase
Probab=92.56 E-value=0.19 Score=46.35 Aligned_cols=34 Identities=21% Similarity=0.329 Sum_probs=23.7
Q ss_pred HHHHHHHHHHhcC-----CCeEEEEeChHHHHHHHHHHh
Q 024392 151 KDQIVDFLKEIVK-----EPAVLVGNSLGGFAALVAAVG 184 (268)
Q Consensus 151 ~~~~~~~l~~~~~-----~~~~lvG~S~Gg~~a~~~a~~ 184 (268)
.+++..+++.... .+|.++|||+||.+|...|..
T Consensus 280 l~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 280 LTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 3444555544321 279999999999999987753
No 221
>PLN02761 lipase class 3 family protein
Probab=92.47 E-value=0.21 Score=46.23 Aligned_cols=34 Identities=24% Similarity=0.244 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHhc-----C-CCeEEEEeChHHHHHHHHHH
Q 024392 150 WKDQIVDFLKEIV-----K-EPAVLVGNSLGGFAALVAAV 183 (268)
Q Consensus 150 ~~~~~~~~l~~~~-----~-~~~~lvG~S~Gg~~a~~~a~ 183 (268)
..+++..+++..+ . -+|.++|||+||.+|...|.
T Consensus 274 Vl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 274 VLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 3445555555442 1 27999999999999998774
No 222
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=92.38 E-value=0.2 Score=44.30 Aligned_cols=37 Identities=22% Similarity=0.246 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEEeChHHHHHHHHHHh
Q 024392 148 MVWKDQIVDFLKEIVKEPAVLVGNSLGGFAALVAAVG 184 (268)
Q Consensus 148 ~~~~~~~~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~ 184 (268)
..+.+++..+++....-++.+.|||+||.+|...|..
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHH
Confidence 5666777777777776689999999999999888764
No 223
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=91.75 E-value=0.2 Score=47.01 Aligned_cols=101 Identities=20% Similarity=0.157 Sum_probs=60.3
Q ss_pred CCcEEEECCCC-C---Chhh--HHHhHHHHHhcCeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHH--------HhcC
Q 024392 98 GSPVVLIHGFG-A---SAFH--WRYNIPELAKRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLK--------EIVK 163 (268)
Q Consensus 98 ~~~vv~lHG~~-~---~~~~--~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~--------~~~~ 163 (268)
.|.++++||.+ . +... |........+...|..+|++.-- ...+...-++.+..+.+ ++..
T Consensus 176 spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~i------gG~nI~h~ae~~vSf~r~kvlei~gefph 249 (784)
T KOG3253|consen 176 SPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPI------GGANIKHAAEYSVSFDRYKVLEITGEFPH 249 (784)
T ss_pred CceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCC------CCcchHHHHHHHHHHhhhhhhhhhccCCC
Confidence 36789999988 1 1122 33333334444778888876321 11233333343333332 2234
Q ss_pred CCeEEEEeChHHHHHHHHHHhCC-CccCeEEEecCCCCCCCC
Q 024392 164 EPAVLVGNSLGGFAALVAAVGLP-DQVTGVALLNSAGQFGDG 204 (268)
Q Consensus 164 ~~~~lvG~S~Gg~~a~~~a~~~p-~~v~~lvl~~~~~~~~~~ 204 (268)
.+|+|+|+|||+.++.+....+- ..|+++|.++-+..-...
T Consensus 250 a~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vdg 291 (784)
T KOG3253|consen 250 APIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVDG 291 (784)
T ss_pred CceEEEecccCceeeEEeccccCCceEEEEEEecccccCCCc
Confidence 68999999999888877765443 358999999887654443
No 224
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=91.23 E-value=0.94 Score=39.77 Aligned_cols=76 Identities=20% Similarity=0.244 Sum_probs=48.6
Q ss_pred CeEEEEcCC-CCCCCCcccc-cC-CHHHHHHHHHHHHHHh-------cCCCeEEEEeChHHHHHHHHHHh----C-----
Q 024392 125 YKVYAVDLL-GFGWSEKAII-EY-DAMVWKDQIVDFLKEI-------VKEPAVLVGNSLGGFAALVAAVG----L----- 185 (268)
Q Consensus 125 ~~v~~~d~~-G~G~s~~~~~-~~-~~~~~~~~~~~~l~~~-------~~~~~~lvG~S~Gg~~a~~~a~~----~----- 185 (268)
.+++.+|.| |.|.|-.... .. +-+..++|+..++... ...+++|.|.|+||...-.+|.. .
T Consensus 2 aNvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~ 81 (319)
T PLN02213 2 ANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCE 81 (319)
T ss_pred ccEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccC
Confidence 368999998 8888854321 11 2223346666555442 24589999999999976666653 2
Q ss_pred -CCccCeEEEecCCCC
Q 024392 186 -PDQVTGVALLNSAGQ 200 (268)
Q Consensus 186 -p~~v~~lvl~~~~~~ 200 (268)
+-.++|+++-+|...
T Consensus 82 ~~inLkGi~IGNg~t~ 97 (319)
T PLN02213 82 PPINLQGYMLGNPVTY 97 (319)
T ss_pred CceeeeEEEeCCCCCC
Confidence 124789888887543
No 225
>PLN02847 triacylglycerol lipase
Probab=90.19 E-value=0.52 Score=44.42 Aligned_cols=21 Identities=33% Similarity=0.297 Sum_probs=18.2
Q ss_pred CCeEEEEeChHHHHHHHHHHh
Q 024392 164 EPAVLVGNSLGGFAALVAAVG 184 (268)
Q Consensus 164 ~~~~lvG~S~Gg~~a~~~a~~ 184 (268)
-+++++|||+||.+|..++..
T Consensus 251 YkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CeEEEeccChHHHHHHHHHHH
Confidence 389999999999999888754
No 226
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=90.13 E-value=2.7 Score=38.78 Aligned_cols=119 Identities=18% Similarity=0.124 Sum_probs=72.1
Q ss_pred CCCceEEeeCCeEEE-EEEcc--CCCcEEEECCCCCChhhHH--HhHHHHHhcCeEEEEcCCCCCCCCcc-cccCCHHHH
Q 024392 77 PEGYNFWTWRGHKIH-YVVQG--EGSPVVLIHGFGASAFHWR--YNIPELAKRYKVYAVDLLGFGWSEKA-IIEYDAMVW 150 (268)
Q Consensus 77 ~~~~~~~~~~g~~~~-~~~~g--~~~~vv~lHG~~~~~~~~~--~~~~~l~~~~~v~~~d~~G~G~s~~~-~~~~~~~~~ 150 (268)
..+.++++..+..+. |...| +.|..|+.-|+-. .+-++ .+++.|.. =-.+.-|.|=-|.+=.. ..++ ....
T Consensus 265 ~GG~r~~D~~reEi~yYFnPGD~KPPL~VYFSGyR~-aEGFEgy~MMk~Lg~-PfLL~~DpRleGGaFYlGs~ey-E~~I 341 (511)
T TIGR03712 265 LGGQRLVDSKRQEFIYYFNPGDFKPPLNVYFSGYRP-AEGFEGYFMMKRLGA-PFLLIGDPRLEGGAFYLGSDEY-EQGI 341 (511)
T ss_pred cCCceEecCCCCeeEEecCCcCCCCCeEEeeccCcc-cCcchhHHHHHhcCC-CeEEeeccccccceeeeCcHHH-HHHH
Confidence 344555555555554 44455 3456788999776 33333 34454433 23455577755544221 1112 3445
Q ss_pred HHHHHHHHHHhcCC--CeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCCC
Q 024392 151 KDQIVDFLKEIVKE--PAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQ 200 (268)
Q Consensus 151 ~~~~~~~l~~~~~~--~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 200 (268)
.+-+.+.++.+|.+ .++|-|-|||..-|++++++.. ..++|+--|-.+
T Consensus 342 ~~~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l~--P~AIiVgKPL~N 391 (511)
T TIGR03712 342 INVIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKLS--PHAIIVGKPLVN 391 (511)
T ss_pred HHHHHHHHHHhCCCHHHeeeccccccchhhhhhcccCC--CceEEEcCcccc
Confidence 56677788888865 7999999999999999998863 356665555443
No 227
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=88.37 E-value=1 Score=38.53 Aligned_cols=25 Identities=28% Similarity=0.353 Sum_probs=21.2
Q ss_pred cCCCeEEEEeChHHHHHHHHHHhCC
Q 024392 162 VKEPAVLVGNSLGGFAALVAAVGLP 186 (268)
Q Consensus 162 ~~~~~~lvG~S~Gg~~a~~~a~~~p 186 (268)
...++.+.|||+||.+|..+..++.
T Consensus 274 pda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T KOG4540|consen 274 PDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred CCceEEEeccccchHHHHHhccccC
Confidence 3458999999999999998887763
No 228
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=88.37 E-value=1 Score=38.53 Aligned_cols=25 Identities=28% Similarity=0.353 Sum_probs=21.2
Q ss_pred cCCCeEEEEeChHHHHHHHHHHhCC
Q 024392 162 VKEPAVLVGNSLGGFAALVAAVGLP 186 (268)
Q Consensus 162 ~~~~~~lvG~S~Gg~~a~~~a~~~p 186 (268)
...++.+.|||+||.+|..+..++.
T Consensus 274 pda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T COG5153 274 PDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred CCceEEEeccccchHHHHHhccccC
Confidence 3458999999999999998887763
No 229
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=86.94 E-value=3.4 Score=32.37 Aligned_cols=79 Identities=19% Similarity=0.254 Sum_probs=53.7
Q ss_pred cEEEECCCCCChhhHHHhHHHHHhcC-eEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHHhcCCCeEEEEeChHHHHH
Q 024392 100 PVVLIHGFGASAFHWRYNIPELAKRY-KVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVKEPAVLVGNSLGGFAA 178 (268)
Q Consensus 100 ~vv~lHG~~~~~~~~~~~~~~l~~~~-~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~lvG~S~Gg~~a 178 (268)
.||+.-|++..++...+++ +.+++ -++.+|+.... .+.+. -..+.+.+|.||||-.+|
T Consensus 13 LIvyFaGwgtpps~v~HLi--lpeN~dl~lcYDY~dl~------ldfDf-------------sAy~hirlvAwSMGVwvA 71 (214)
T COG2830 13 LIVYFAGWGTPPSAVNHLI--LPENHDLLLCYDYQDLN------LDFDF-------------SAYRHIRLVAWSMGVWVA 71 (214)
T ss_pred EEEEEecCCCCHHHHhhcc--CCCCCcEEEEeehhhcC------cccch-------------hhhhhhhhhhhhHHHHHH
Confidence 7888999999888776654 34444 46678886431 11111 113467899999999999
Q ss_pred HHHHHhCCCccCeEEEecCCCCC
Q 024392 179 LVAAVGLPDQVTGVALLNSAGQF 201 (268)
Q Consensus 179 ~~~a~~~p~~v~~lvl~~~~~~~ 201 (268)
-++.+..+ ++..+.+++.+-.
T Consensus 72 eR~lqg~~--lksatAiNGTgLp 92 (214)
T COG2830 72 ERVLQGIR--LKSATAINGTGLP 92 (214)
T ss_pred HHHHhhcc--ccceeeecCCCCC
Confidence 99888775 6666777776543
No 230
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=86.75 E-value=10 Score=31.52 Aligned_cols=98 Identities=13% Similarity=0.158 Sum_probs=55.3
Q ss_pred cEEEECCCCCChh-hHHHhHHHHHhc-CeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHHhcCC---CeEEEEeChH
Q 024392 100 PVVLIHGFGASAF-HWRYNIPELAKR-YKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVKE---PAVLVGNSLG 174 (268)
Q Consensus 100 ~vv~lHG~~~~~~-~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~lvG~S~G 174 (268)
|+|++=||.+... ......+...+. +.++.+-.+-...... .......++.+.+.+.....+ ++.+-.+|.|
T Consensus 1 plvvl~gW~gA~~~hl~KY~~~Y~~~g~~il~~~~~~~~~~~~---~~~~~~~~~~l~~~l~~~~~~~~~~il~H~FSnG 77 (240)
T PF05705_consen 1 PLVVLLGWMGAKPKHLAKYSDLYQDPGFDILLVTSPPADFFWP---SKRLAPAADKLLELLSDSQSASPPPILFHSFSNG 77 (240)
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEeCCHHHHeee---ccchHHHHHHHHHHhhhhccCCCCCEEEEEEECc
Confidence 4666677776553 444444444334 8888876553211111 123444455555655554332 8999999998
Q ss_pred HHHHHHHHHh-----C-----CCccCeEEEecCCCC
Q 024392 175 GFAALVAAVG-----L-----PDQVTGVALLNSAGQ 200 (268)
Q Consensus 175 g~~a~~~a~~-----~-----p~~v~~lvl~~~~~~ 200 (268)
|...+..... . -++++|+|+=++++.
T Consensus 78 G~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~ 113 (240)
T PF05705_consen 78 GSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGI 113 (240)
T ss_pred hHHHHHHHHHHHHhcccccccccccceeEEeCCCCc
Confidence 8766654331 1 124888886666543
No 231
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=85.16 E-value=11 Score=32.58 Aligned_cols=101 Identities=13% Similarity=0.159 Sum_probs=71.7
Q ss_pred CcEEEECCCCCChh-hHHHhHHHHHhcCeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHHhcCCCeEEEEeChHHH-
Q 024392 99 SPVVLIHGFGASAF-HWRYNIPELAKRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVKEPAVLVGNSLGGF- 176 (268)
Q Consensus 99 ~~vv~lHG~~~~~~-~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~lvG~S~Gg~- 176 (268)
|.|+++--+.++.. ..+.-.+.|-....|+..|+-.--.-.-....++.+++.+-+.+.+..+|.+ +++++-+.-+.
T Consensus 104 PkvLivapmsGH~aTLLR~TV~alLp~~~vyitDW~dAr~Vp~~~G~FdldDYIdyvie~~~~~Gp~-~hv~aVCQP~vP 182 (415)
T COG4553 104 PKVLIVAPMSGHYATLLRGTVEALLPYHDVYITDWVDARMVPLEAGHFDLDDYIDYVIEMINFLGPD-AHVMAVCQPTVP 182 (415)
T ss_pred CeEEEEecccccHHHHHHHHHHHhccccceeEeeccccceeecccCCccHHHHHHHHHHHHHHhCCC-CcEEEEecCCch
Confidence 46777766666554 4556677777778899999864332222345678999999999999999976 77777776644
Q ss_pred ----HHHHHHHhCCCccCeEEEecCCCC
Q 024392 177 ----AALVAAVGLPDQVTGVALLNSAGQ 200 (268)
Q Consensus 177 ----~a~~~a~~~p~~v~~lvl~~~~~~ 200 (268)
+++.-+..+|.....+++++++.+
T Consensus 183 vLAAisLM~~~~~p~~PssMtlmGgPID 210 (415)
T COG4553 183 VLAAISLMEEDGDPNVPSSMTLMGGPID 210 (415)
T ss_pred HHHHHHHHHhcCCCCCCceeeeecCccc
Confidence 444444567777889999998764
No 232
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=85.07 E-value=4.3 Score=33.78 Aligned_cols=41 Identities=15% Similarity=0.108 Sum_probs=29.2
Q ss_pred cCCHHHHHHHHHHHHHHh--cCCCeEEEEeChHHHHHHHHHHh
Q 024392 144 EYDAMVWKDQIVDFLKEI--VKEPAVLVGNSLGGFAALVAAVG 184 (268)
Q Consensus 144 ~~~~~~~~~~~~~~l~~~--~~~~~~lvG~S~Gg~~a~~~a~~ 184 (268)
+.+..+-++.+.+.++.. ..++++++|+|+|+.++.....+
T Consensus 26 ~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~ 68 (225)
T PF08237_consen 26 DESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRR 68 (225)
T ss_pred chHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHH
Confidence 344555556666666552 34689999999999999887665
No 233
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=79.37 E-value=7.5 Score=36.81 Aligned_cols=99 Identities=20% Similarity=0.041 Sum_probs=54.5
Q ss_pred cEEEECCCCC---ChhhHHHhHHHHHhc--CeEEEEcCCCCCCCCcccccCCHHHHHH---HHHHHHHHhc--CCCeEEE
Q 024392 100 PVVLIHGFGA---SAFHWRYNIPELAKR--YKVYAVDLLGFGWSEKAIIEYDAMVWKD---QIVDFLKEIV--KEPAVLV 169 (268)
Q Consensus 100 ~vv~lHG~~~---~~~~~~~~~~~l~~~--~~v~~~d~~G~G~s~~~~~~~~~~~~~~---~~~~~l~~~~--~~~~~lv 169 (268)
.|+-.||.+. ++.+-+...+.+++. ..|+.+|+-=--.. +.....++..- .+..-...+| .+||+++
T Consensus 398 li~HcHGGGfVAqsSkSHE~YLr~Wa~aL~cPiiSVdYSLAPEa---PFPRaleEv~fAYcW~inn~allG~TgEriv~a 474 (880)
T KOG4388|consen 398 LIVHCHGGGFVAQSSKSHEPYLRSWAQALGCPIISVDYSLAPEA---PFPRALEEVFFAYCWAINNCALLGSTGERIVLA 474 (880)
T ss_pred EEEEecCCceeeeccccccHHHHHHHHHhCCCeEEeeeccCCCC---CCCcHHHHHHHHHHHHhcCHHHhCcccceEEEe
Confidence 4677888763 333444555666665 88999997422111 11111111100 1111112334 3699999
Q ss_pred EeChHHHH----HHHHHHhCCCccCeEEEecCCCCC
Q 024392 170 GNSLGGFA----ALVAAVGLPDQVTGVALLNSAGQF 201 (268)
Q Consensus 170 G~S~Gg~~----a~~~a~~~p~~v~~lvl~~~~~~~ 201 (268)
|-|.||.+ ++++.+..-...+|+++.-++.-+
T Consensus 475 GDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~ptl~ 510 (880)
T KOG4388|consen 475 GDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPPTLL 510 (880)
T ss_pred ccCCCcceeehhHHHHHHhCCCCCCceEEecChhhc
Confidence 99999985 444444443334788887776543
No 234
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=79.18 E-value=21 Score=25.61 Aligned_cols=82 Identities=16% Similarity=0.189 Sum_probs=51.4
Q ss_pred hHHHhHHHHHhc-CeEEEEcCCCCCCCCcccccCCH-HHHHHHHHHHHHHhcCCCeEEEEeChHHH--HHHHHHHhCCCc
Q 024392 113 HWRYNIPELAKR-YKVYAVDLLGFGWSEKAIIEYDA-MVWKDQIVDFLKEIVKEPAVLVGNSLGGF--AALVAAVGLPDQ 188 (268)
Q Consensus 113 ~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~lvG~S~Gg~--~a~~~a~~~p~~ 188 (268)
.|..+.+.+..+ +..-.+.++.+|.+-........ +.-...+..+++.....+++++|=|--.= +-..++.++|++
T Consensus 12 ly~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~~~~~~K~~~i~~i~~~fP~~kfiLIGDsgq~DpeiY~~ia~~~P~~ 91 (100)
T PF09949_consen 12 LYPFLRDFLRRNGFPAGPLLLRDYGPSLSGLFKSGAEEHKRDNIERILRDFPERKFILIGDSGQHDPEIYAEIARRFPGR 91 (100)
T ss_pred HHHHHHHHHHhcCCCCCceEcccCCccccccccCCchhHHHHHHHHHHHHCCCCcEEEEeeCCCcCHHHHHHHHHHCCCC
Confidence 344455666665 65555666666544322111111 23346677888888888999999885533 444577899999
Q ss_pred cCeEEE
Q 024392 189 VTGVAL 194 (268)
Q Consensus 189 v~~lvl 194 (268)
|.++.+
T Consensus 92 i~ai~I 97 (100)
T PF09949_consen 92 ILAIYI 97 (100)
T ss_pred EEEEEE
Confidence 998754
No 235
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=77.93 E-value=7.9 Score=36.66 Aligned_cols=36 Identities=31% Similarity=0.595 Sum_probs=26.2
Q ss_pred CCCeEEEEeChHHHHHHHHHHh-----CCC------ccCeEEEecCC
Q 024392 163 KEPAVLVGNSLGGFAALVAAVG-----LPD------QVTGVALLNSA 198 (268)
Q Consensus 163 ~~~~~lvG~S~Gg~~a~~~a~~-----~p~------~v~~lvl~~~~ 198 (268)
.++|+.+||||||.++-.+... .|+ .-.|+|+++.+
T Consensus 525 ~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~P 571 (697)
T KOG2029|consen 525 DRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVP 571 (697)
T ss_pred CCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecC
Confidence 4589999999999887665533 232 35688888886
No 236
>PRK12467 peptide synthase; Provisional
Probab=75.41 E-value=25 Score=41.63 Aligned_cols=98 Identities=16% Similarity=0.065 Sum_probs=67.5
Q ss_pred CcEEEECCCCCChhhHHHhHHHHHhcCeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHHhcC-CCeEEEEeChHHHH
Q 024392 99 SPVVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVK-EPAVLVGNSLGGFA 177 (268)
Q Consensus 99 ~~vv~lHG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~lvG~S~Gg~~ 177 (268)
+.++..|...++...+..+...+.....++.+..++.-. + .....++...+....+.+.+... .+..+.|+|+||.+
T Consensus 3693 ~~l~~~h~~~r~~~~~~~l~~~l~~~~~~~~l~~~~~~~-d-~~~~~~~~~~~~~y~~~~~~~~~~~p~~l~g~s~g~~~ 3770 (3956)
T PRK12467 3693 PALFCRHEGLGTVFDYEPLAVILEGDRHVLGLTCRHLLD-D-GWQDTSLQAMAVQYADYILWQQAKGPYGLLGWSLGGTL 3770 (3956)
T ss_pred cceeeechhhcchhhhHHHHHHhCCCCcEEEEecccccc-c-cCCccchHHHHHHHHHHHHHhccCCCeeeeeeecchHH
Confidence 459999998888777777777787667788877665421 1 11234566666777777766543 47899999999999
Q ss_pred HHHHHHh---CCCccCeEEEecCC
Q 024392 178 ALVAAVG---LPDQVTGVALLNSA 198 (268)
Q Consensus 178 a~~~a~~---~p~~v~~lvl~~~~ 198 (268)
+..++.. ..+.++-+.+++..
T Consensus 3771 a~~~~~~l~~~g~~~~~~~~~~~~ 3794 (3956)
T PRK12467 3771 ARLVAELLEREGESEAFLGLFDNT 3794 (3956)
T ss_pred HHHHHHHHHHcCCceeEEEEEecc
Confidence 9888764 34456656555443
No 237
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=73.90 E-value=21 Score=31.99 Aligned_cols=86 Identities=19% Similarity=0.224 Sum_probs=55.8
Q ss_pred CcEEEECCCCCCh-------hhHHHhHHHHHhcCeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHHhcCCCeEEEEe
Q 024392 99 SPVVLIHGFGASA-------FHWRYNIPELAKRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVKEPAVLVGN 171 (268)
Q Consensus 99 ~~vv~lHG~~~~~-------~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~lvG~ 171 (268)
..||++||-..|. +.|..+++.+.++--+-.+|....|.-++ .++.+..+..++.. + +-.++..
T Consensus 172 ~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~G------leeDa~~lR~~a~~-~--~~~lva~ 242 (396)
T COG1448 172 GSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADG------LEEDAYALRLFAEV-G--PELLVAS 242 (396)
T ss_pred CCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccc------hHHHHHHHHHHHHh-C--CcEEEEe
Confidence 3699999866554 58999999988886666677655554333 22222333333322 2 3388888
Q ss_pred ChHHHHHHHHHHhCCCccCeEEEecCC
Q 024392 172 SLGGFAALVAAVGLPDQVTGVALLNSA 198 (268)
Q Consensus 172 S~Gg~~a~~~a~~~p~~v~~lvl~~~~ 198 (268)
|+.-.+++ |.+||.++.+++..
T Consensus 243 S~SKnfgL-----YgERVGa~~vva~~ 264 (396)
T COG1448 243 SFSKNFGL-----YGERVGALSVVAED 264 (396)
T ss_pred hhhhhhhh-----hhhccceeEEEeCC
Confidence 88766654 57889999888663
No 238
>PF10518 TAT_signal: TAT (twin-arginine translocation) pathway signal sequence; InterPro: IPR019546 The twin-arginine translocation (Tat) pathway serves the role of transporting folded proteins across energy-transducing membranes []. Homologues of the genes that encode the transport apparatus occur in archaea, bacteria, chloroplasts, and plant mitochondria []. In bacteria, the Tat pathway catalyses the export of proteins from the cytoplasm across the inner/cytoplasmic membrane. In chloroplasts, the Tat components are found in the thylakoid membrane and direct the import of proteins from the stroma. The Tat pathway acts separately from the general secretory (Sec) pathway, which transports proteins in an unfolded state []. It is generally accepted that the primary role of the Tat system is to translocate fully folded proteins across membranes. An example of proteins that need to be exported in their 3D conformation are redox proteins that have acquired complex multi-atom cofactors in the bacterial cytoplasm (or the chloroplast stroma or mitochondrial matrix). They include hydrogenases, formate dehydrogenases, nitrate reductases, trimethylamine N-oxide (TMAO) reductases and dimethyl sulphoxide (DMSO) reductases [, ]. The Tat system can also export whole heteroligomeric complexes in which some proteins have no Tat signal. This is the case of the DMSO reductase or formate dehydrogenase complexes. But there are also other cases where the physiological rationale for targeting a protein to the Tat signal is less obvious. Indeed, there are examples of homologous proteins that are in some cases targeted to the Tat pathway and in other cases to the Sec apparatus. Some examples are: copper nitrite reductases, flavin domains of flavocytochrome c and N-acetylmuramoyl-L-alanine amidases []. In halophilic archaea such as Halobacterium almost all secreted proteins appear to be Tat targeted. It has been proposed to be a response to the difficulties these organisms would otherwise face in successfully folding proteins extracellularly at high ionic strength []. The Tat signal peptide consists of three motifs: the positively charged N-terminal motif, the hydrophobic region and the C-terminal region that generally ends with a consensus short motif (A-x-A) specifying cleavage by signal peptidase. Sequence analysis revealed that signal peptides capable of targeting the Tat protein contain the consensus sequence [ST]-R-R-x-F-L-K. The nearly invariant twin-arginine gave rise to the pathway's name. In addition the h-region of Tat signal peptides is typically less hydrophobic than that of Sec-specific signal peptides [, ].
Probab=73.72 E-value=5.6 Score=20.86 Aligned_cols=20 Identities=40% Similarity=0.697 Sum_probs=13.7
Q ss_pred hhhHHHHHHHHHHHHHHHHh
Q 024392 40 ISRRTFVFRGIVASGASVIG 59 (268)
Q Consensus 40 m~rr~~~~~~~~~~~~~~~~ 59 (268)
++||.|+..++++.++...+
T Consensus 2 ~sRR~fLk~~~a~~a~~~~~ 21 (26)
T PF10518_consen 2 LSRRQFLKGGAAAAAAAALG 21 (26)
T ss_pred CcHHHHHHHHHHHHHHHHhc
Confidence 57899888777666555543
No 239
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=69.93 E-value=33 Score=30.20 Aligned_cols=103 Identities=23% Similarity=0.175 Sum_probs=66.1
Q ss_pred CCCcEEEECCCCCChh----hHHHhHH----------HHHhcCeEEEEcCC-CCCCCCcc---cccCCHHHHHHHHHHHH
Q 024392 97 EGSPVVLIHGFGASAF----HWRYNIP----------ELAKRYKVYAVDLL-GFGWSEKA---IIEYDAMVWKDQIVDFL 158 (268)
Q Consensus 97 ~~~~vv~lHG~~~~~~----~~~~~~~----------~l~~~~~v~~~d~~-G~G~s~~~---~~~~~~~~~~~~~~~~l 158 (268)
..|..+.+.|.++.+. .|+.+-+ .+-+...++.+|-| |.|.|--. ....+..+.+.|+.+++
T Consensus 30 ~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~adllfvDnPVGaGfSyVdg~~~Y~~~~~qia~Dl~~ll 109 (414)
T KOG1283|consen 30 ERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKDADLLFVDNPVGAGFSYVDGSSAYTTNNKQIALDLVELL 109 (414)
T ss_pred CCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhhccEEEecCCCcCceeeecCcccccccHHHHHHHHHHHH
Confidence 3466788888776653 3332211 12223467777765 66766332 23346778899999999
Q ss_pred HHh-------cCCCeEEEEeChHHHHHHHHHHhCC---------CccCeEEEecCCC
Q 024392 159 KEI-------VKEPAVLVGNSLGGFAALVAAVGLP---------DQVTGVALLNSAG 199 (268)
Q Consensus 159 ~~~-------~~~~~~lvG~S~Gg~~a~~~a~~~p---------~~v~~lvl~~~~~ 199 (268)
+.+ ...+++++..|+||-++..++...- ..+.++++=++..
T Consensus 110 k~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWI 166 (414)
T KOG1283|consen 110 KGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWI 166 (414)
T ss_pred HHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCccc
Confidence 875 2348999999999999998876532 1355677666643
No 240
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=68.99 E-value=13 Score=34.74 Aligned_cols=41 Identities=22% Similarity=0.214 Sum_probs=31.6
Q ss_pred hcCCCeEEEEeChHHHHHHHHHHh-----CCCccCeEEEecCCCCC
Q 024392 161 IVKEPAVLVGNSLGGFAALVAAVG-----LPDQVTGVALLNSAGQF 201 (268)
Q Consensus 161 ~~~~~~~lvG~S~Gg~~a~~~a~~-----~p~~v~~lvl~~~~~~~ 201 (268)
.|.+||.|+|+|+|+-+....... .-..|+.+++++++...
T Consensus 444 qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~ 489 (633)
T KOG2385|consen 444 QGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPT 489 (633)
T ss_pred cCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccC
Confidence 477899999999999988866543 23358899999887543
No 241
>TIGR01626 ytfJ_HI0045 conserved hypothetical protein YtfJ-family, TIGR01626. This model represents sequences from gamma proteobacteria that are related to the E. coli protein, YtfJ.
Probab=68.35 E-value=22 Score=28.53 Aligned_cols=105 Identities=15% Similarity=0.046 Sum_probs=58.7
Q ss_pred eeCCeEEEEEEcc----CCCc--EEEECCCCCChhhHHHhHHHHHhc-CeE------EEEcCCCCCCCCcccccCCHHHH
Q 024392 84 TWRGHKIHYVVQG----EGSP--VVLIHGFGASAFHWRYNIPELAKR-YKV------YAVDLLGFGWSEKAIIEYDAMVW 150 (268)
Q Consensus 84 ~~~g~~~~~~~~g----~~~~--vv~lHG~~~~~~~~~~~~~~l~~~-~~v------~~~d~~G~G~s~~~~~~~~~~~~ 150 (268)
..+|..+.|..+. .|.+ |-++-|+....+.-.+++..|.++ +.+ +.++.. .+....
T Consensus 41 ~~~~~~~~y~~~~~~~l~GKV~lvn~~Aswc~~c~~e~P~l~~l~~~~~~~~~y~~t~~IN~d-----------d~~~~~ 109 (184)
T TIGR01626 41 VLSGKDTVYQPWGSAELAGKVRVVHHIAGRTSAKEXNASLIDAIKAAKFPPVKYQTTTIINAD-----------DAIVGT 109 (184)
T ss_pred EEcCCcccceeccHHHcCCCEEEEEEEecCCChhhccchHHHHHHHcCCCcccccceEEEECc-----------cchhhH
Confidence 4577888888775 3443 455668888888888999999876 776 777632 112222
Q ss_pred HHHHHHHHHHhcCC-CeEEEEeChHHHHHHHHHHhCCCccCeEEEecCCCCC
Q 024392 151 KDQIVDFLKEIVKE-PAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQF 201 (268)
Q Consensus 151 ~~~~~~~l~~~~~~-~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 201 (268)
...+.+.++..+.+ ++..+...-.|.++..+.... .-..+++++.-+..
T Consensus 110 ~~fVk~fie~~~~~~P~~~vllD~~g~v~~~~gv~~--~P~T~fVIDk~GkV 159 (184)
T TIGR01626 110 GMFVKSSAKKGKKENPWSQVVLDDKGAVKNAWQLNS--EDSAIIVLDKTGKV 159 (184)
T ss_pred HHHHHHHHHHhcccCCcceEEECCcchHHHhcCCCC--CCceEEEECCCCcE
Confidence 34455566655433 322333333444444332211 11344677776653
No 242
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=65.92 E-value=41 Score=28.99 Aligned_cols=47 Identities=21% Similarity=0.257 Sum_probs=30.8
Q ss_pred HHHHHHHHhcC---CCeEEEEeChHHHHHHHHH---HhCCCccCeEEEecCCC
Q 024392 153 QIVDFLKEIVK---EPAVLVGNSLGGFAALVAA---VGLPDQVTGVALLNSAG 199 (268)
Q Consensus 153 ~~~~~l~~~~~---~~~~lvG~S~Gg~~a~~~a---~~~p~~v~~lvl~~~~~ 199 (268)
.+.+.++.+.. .|++|.|.|+|+.-+...- ...-+++++.+..+++.
T Consensus 95 aV~~~~~~lP~~~RPkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~ 147 (289)
T PF10081_consen 95 AVYARWSTLPEDRRPKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPF 147 (289)
T ss_pred HHHHHHHhCCcccCCeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCC
Confidence 33344444432 3799999999977655432 23345799999888865
No 243
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=63.50 E-value=9.4 Score=32.74 Aligned_cols=29 Identities=31% Similarity=0.377 Sum_probs=23.2
Q ss_pred HHHHHHhcCCCeEEEEeChHHHHHHHHHH
Q 024392 155 VDFLKEIVKEPAVLVGNSLGGFAALVAAV 183 (268)
Q Consensus 155 ~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~ 183 (268)
.++++..|.++-.++|||+|-..|+.++.
T Consensus 73 ~~~l~~~Gi~p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 73 ARLWRSWGVRPDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred HHHHHHcCCcccEEEecCHHHHHHHHHhC
Confidence 34556778889999999999988877654
No 244
>PRK13728 conjugal transfer protein TrbB; Provisional
Probab=62.69 E-value=57 Score=26.16 Aligned_cols=54 Identities=17% Similarity=0.263 Sum_probs=36.0
Q ss_pred CceEEeeCCeEEEEEEccCCCcEEEECCCCCChhhHHHhHHHHHhc--CeEEEEcCCCC
Q 024392 79 GYNFWTWRGHKIHYVVQGEGSPVVLIHGFGASAFHWRYNIPELAKR--YKVYAVDLLGF 135 (268)
Q Consensus 79 ~~~~~~~~g~~~~~~~~g~~~~vv~lHG~~~~~~~~~~~~~~l~~~--~~v~~~d~~G~ 135 (268)
...|...+|..+.....+ .|+|...+........+.+..+.++ +.|+.++.-+.
T Consensus 55 ~~~f~l~dG~~v~lsd~~---lV~FwaswCp~C~~e~P~L~~l~~~~g~~Vi~Vs~D~~ 110 (181)
T PRK13728 55 PRWFRLSNGRQVNLADWK---VVLFMQGHCPYCHQFDPVLKQLAQQYGFSVFPYTLDGQ 110 (181)
T ss_pred CCccCCCCCCEeehhHce---EEEEECCCCHhHHHHHHHHHHHHHHcCCEEEEEEeCCC
Confidence 334444577666544443 7788888877777777777777666 78888876544
No 245
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=60.38 E-value=12 Score=32.20 Aligned_cols=30 Identities=30% Similarity=0.416 Sum_probs=23.2
Q ss_pred HHHHHHHhcCCCeEEEEeChHHHHHHHHHH
Q 024392 154 IVDFLKEIVKEPAVLVGNSLGGFAALVAAV 183 (268)
Q Consensus 154 ~~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~ 183 (268)
+.+.+++.|.++..++|||+|=..|+.++.
T Consensus 66 l~~~l~~~g~~P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 66 AWRALLALLPRPSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred HHHHHHhcCCCCcEEeecCHHHHHHHHHhC
Confidence 344556678889999999999888777653
No 246
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=59.19 E-value=7 Score=34.13 Aligned_cols=30 Identities=40% Similarity=0.627 Sum_probs=23.3
Q ss_pred HHHHHHHhcCCCeEEEEeChHHHHHHHHHH
Q 024392 154 IVDFLKEIVKEPAVLVGNSLGGFAALVAAV 183 (268)
Q Consensus 154 ~~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~ 183 (268)
+.++++..|.++-.++|||+|=..|+.++.
T Consensus 74 l~~~l~~~Gi~P~~v~GhSlGE~aA~~aaG 103 (318)
T PF00698_consen 74 LARLLRSWGIKPDAVIGHSLGEYAALVAAG 103 (318)
T ss_dssp HHHHHHHTTHCESEEEESTTHHHHHHHHTT
T ss_pred hhhhhcccccccceeeccchhhHHHHHHCC
Confidence 445567778889999999999887776643
No 247
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=56.92 E-value=59 Score=26.37 Aligned_cols=63 Identities=21% Similarity=0.144 Sum_probs=45.9
Q ss_pred CeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHHhcCCCeEEEEeCh----HHHHHHHHHHhC-CCccCeEEEe
Q 024392 125 YKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVKEPAVLVGNSL----GGFAALVAAVGL-PDQVTGVALL 195 (268)
Q Consensus 125 ~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~lvG~S~----Gg~~a~~~a~~~-p~~v~~lvl~ 195 (268)
-.|+..|.++. ..++.+.+++.+.+++++.+ -.++++|+|. |..++.++|.+. -..+..++-+
T Consensus 78 d~V~~~~~~~~-------~~~~~e~~a~al~~~i~~~~-p~lVL~~~t~~~~~grdlaprlAarLga~lvsdv~~l 145 (202)
T cd01714 78 DRAILVSDRAF-------AGADTLATAKALAAAIKKIG-VDLILTGKQSIDGDTGQVGPLLAELLGWPQITYVSKI 145 (202)
T ss_pred CEEEEEecccc-------cCCChHHHHHHHHHHHHHhC-CCEEEEcCCcccCCcCcHHHHHHHHhCCCccceEEEE
Confidence 57887776543 24677888899999888877 5789999998 888888888764 2345555544
No 248
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=55.65 E-value=15 Score=31.33 Aligned_cols=28 Identities=46% Similarity=0.489 Sum_probs=21.7
Q ss_pred HHHHHhc-CCCeEEEEeChHHHHHHHHHH
Q 024392 156 DFLKEIV-KEPAVLVGNSLGGFAALVAAV 183 (268)
Q Consensus 156 ~~l~~~~-~~~~~lvG~S~Gg~~a~~~a~ 183 (268)
+.+++.+ .++..++|||+|=..|+.++.
T Consensus 74 ~~l~~~g~i~p~~v~GhS~GE~aAa~~aG 102 (290)
T TIGR00128 74 LKLKEQGGLKPDFAAGHSLGEYSALVAAG 102 (290)
T ss_pred HHHHHcCCCCCCEEeecCHHHHHHHHHhC
Confidence 4445566 889999999999988777664
No 249
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=53.96 E-value=1e+02 Score=27.35 Aligned_cols=86 Identities=16% Similarity=0.003 Sum_probs=47.3
Q ss_pred CcEEEECCCCCC----h-hhHHHhHHHHHhc--CeEEEEcCCCCCCCCccc----------------ccCCHHHHHHHHH
Q 024392 99 SPVVLIHGFGAS----A-FHWRYNIPELAKR--YKVYAVDLLGFGWSEKAI----------------IEYDAMVWKDQIV 155 (268)
Q Consensus 99 ~~vv~lHG~~~~----~-~~~~~~~~~l~~~--~~v~~~d~~G~G~s~~~~----------------~~~~~~~~~~~~~ 155 (268)
..|+++-|.... . .+--.+...|.+. -.++++-.+|.|.-.-.. ......+.+....
T Consensus 32 ~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~~AY 111 (423)
T COG3673 32 RLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIREAY 111 (423)
T ss_pred eEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHHHHH
Confidence 467777774322 1 3344455666663 666666667877442110 0111122222222
Q ss_pred HHH-HHh-cCCCeEEEEeChHHHHHHHHHHh
Q 024392 156 DFL-KEI-VKEPAVLVGNSLGGFAALVAAVG 184 (268)
Q Consensus 156 ~~l-~~~-~~~~~~lvG~S~Gg~~a~~~a~~ 184 (268)
.++ .+. ..++|++.|+|-|+..+-.+|..
T Consensus 112 rFL~~~yepGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 112 RFLIFNYEPGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHHhcCCCCeEEEeeccchhHHHHHHHHH
Confidence 222 222 24799999999999999888764
No 250
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=50.97 E-value=1.1e+02 Score=26.27 Aligned_cols=23 Identities=26% Similarity=0.244 Sum_probs=19.7
Q ss_pred CCCeEEEEeChHHHHHHHHHHhC
Q 024392 163 KEPAVLVGNSLGGFAALVAAVGL 185 (268)
Q Consensus 163 ~~~~~lvG~S~Gg~~a~~~a~~~ 185 (268)
.++|+++|.|-|+..|-.++..-
T Consensus 91 gd~I~lfGFSRGA~~AR~~a~~i 113 (277)
T PF09994_consen 91 GDRIYLFGFSRGAYTARAFANMI 113 (277)
T ss_pred cceEEEEecCccHHHHHHHHHHH
Confidence 46899999999999999888653
No 251
>PF05984 Cytomega_UL20A: Cytomegalovirus UL20A protein; InterPro: IPR009245 This family consists of several Cytomegalovirus UL20A proteins. UL20A is thought to be a glycoprotein [].
Probab=50.86 E-value=23 Score=24.25 Aligned_cols=11 Identities=36% Similarity=0.410 Sum_probs=7.8
Q ss_pred cCeEEEEcCCC
Q 024392 124 RYKVYAVDLLG 134 (268)
Q Consensus 124 ~~~v~~~d~~G 134 (268)
.|.|++-|--|
T Consensus 68 dYDVLItd~dG 78 (100)
T PF05984_consen 68 DYDVLITDGDG 78 (100)
T ss_pred cccEEEecCCC
Confidence 48888887554
No 252
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=50.46 E-value=30 Score=27.07 Aligned_cols=34 Identities=24% Similarity=0.275 Sum_probs=27.1
Q ss_pred HHHHHHHHhcCCCeEEEEeChHHHHHHHHHHhCC
Q 024392 153 QIVDFLKEIVKEPAVLVGNSLGGFAALVAAVGLP 186 (268)
Q Consensus 153 ~~~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p 186 (268)
-+.+.+++.+...-.+.|-|.|+.++..++...+
T Consensus 15 Gvl~aL~e~gi~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 15 GVAKALRERGPLIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCC
Confidence 4455566667777899999999999999998654
No 253
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=49.91 E-value=61 Score=29.13 Aligned_cols=35 Identities=20% Similarity=0.270 Sum_probs=28.9
Q ss_pred cCCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecC
Q 024392 162 VKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNS 197 (268)
Q Consensus 162 ~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~ 197 (268)
.++++++.|.|==|..+...|. ..+||++++-+.-
T Consensus 170 ~i~~FvV~GaSKRGWTtWltaa-~D~RV~aivP~Vi 204 (367)
T PF10142_consen 170 NIEKFVVTGASKRGWTTWLTAA-VDPRVKAIVPIVI 204 (367)
T ss_pred CccEEEEeCCchHhHHHHHhhc-cCcceeEEeeEEE
Confidence 4779999999999999988888 4568999886554
No 254
>PRK03147 thiol-disulfide oxidoreductase; Provisional
Probab=48.43 E-value=86 Score=24.10 Aligned_cols=54 Identities=11% Similarity=0.122 Sum_probs=27.8
Q ss_pred CceEEeeCCeEEEEEEccCCCcEEEE-CCCCCChhh----HHHhHHHHHhc-CeEEEEcC
Q 024392 79 GYNFWTWRGHKIHYVVQGEGSPVVLI-HGFGASAFH----WRYNIPELAKR-YKVYAVDL 132 (268)
Q Consensus 79 ~~~~~~~~g~~~~~~~~g~~~~vv~l-HG~~~~~~~----~~~~~~~l~~~-~~v~~~d~ 132 (268)
...+...+|..+......+++.+|++ ..+...... +..+.+.+.+. ..++.++.
T Consensus 43 ~~~~~~~~g~~~~l~~~~~k~~~l~f~a~~C~~C~~~~~~l~~~~~~~~~~~~~vi~i~~ 102 (173)
T PRK03147 43 NFVLTDLEGKKIELKDLKGKGVFLNFWGTWCKPCEKEMPYMNELYPKYKEKGVEIIAVNV 102 (173)
T ss_pred CcEeecCCCCEEeHHHcCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEEc
Confidence 45566778877665444444554444 333333222 23334444444 67788765
No 255
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=47.67 E-value=28 Score=30.28 Aligned_cols=35 Identities=26% Similarity=0.307 Sum_probs=29.0
Q ss_pred HHHHHHHHHhcCCCeEEEEeChHHHHHHHHHHhCC
Q 024392 152 DQIVDFLKEIVKEPAVLVGNSLGGFAALVAAVGLP 186 (268)
Q Consensus 152 ~~~~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p 186 (268)
--+.+.+++.+++.-.+.|-|+|+.++..+|..+.
T Consensus 27 iGVl~aL~e~gi~~~~iaGtS~GAiva~l~A~g~~ 61 (306)
T COG1752 27 IGVLKALEEAGIPIDVIAGTSAGAIVAALYAAGMD 61 (306)
T ss_pred HHHHHHHHHcCCCccEEEecCHHHHHHHHHHcCCC
Confidence 34667777788888899999999999999998643
No 256
>PRK10279 hypothetical protein; Provisional
Probab=47.41 E-value=29 Score=30.18 Aligned_cols=34 Identities=21% Similarity=0.305 Sum_probs=27.7
Q ss_pred HHHHHHHHhcCCCeEEEEeChHHHHHHHHHHhCC
Q 024392 153 QIVDFLKEIVKEPAVLVGNSLGGFAALVAAVGLP 186 (268)
Q Consensus 153 ~~~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p 186 (268)
-+.+.+++.++..-.+.|-|+|+.++..||....
T Consensus 22 GVL~aL~E~gi~~d~i~GtS~GAlvga~yA~g~~ 55 (300)
T PRK10279 22 GVINALKKVGIEIDIVAGCSIGSLVGAAYACDRL 55 (300)
T ss_pred HHHHHHHHcCCCcCEEEEEcHHHHHHHHHHcCCh
Confidence 3556666778888899999999999999987654
No 257
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=47.17 E-value=32 Score=30.04 Aligned_cols=62 Identities=15% Similarity=0.041 Sum_probs=40.7
Q ss_pred hHHHhHHHHHhcCeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHHhcCCCeEEEEeChHHHHHHHHHHhC
Q 024392 113 HWRYNIPELAKRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVKEPAVLVGNSLGGFAALVAAVGL 185 (268)
Q Consensus 113 ~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~ 185 (268)
+|..+++.+...-..++++-=|. -.-...-+.+.+++.++..-.++|-|+|+.++..++...
T Consensus 3 d~~rl~r~l~~~~~gLvL~GGG~-----------RG~ahiGvL~aLee~gi~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 3 DFSRLARVLTGNSIALVLGGGGA-----------RGCAHIGVIKALEEAGIPVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred hHHHHHHHhcCCCEEEEECChHH-----------HHHHHHHHHHHHHHcCCCCCEEEEECHHHHHHHHHHcCC
Confidence 46667777776644444442110 011123456666777887778999999999999998874
No 258
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=44.87 E-value=22 Score=25.21 Aligned_cols=16 Identities=19% Similarity=0.542 Sum_probs=6.9
Q ss_pred HHHHHHHHHHHHHHHH
Q 024392 43 RTFVFRGIVASGASVI 58 (268)
Q Consensus 43 r~~~~~~~~~~~~~~~ 58 (268)
+.++++++++++++++
T Consensus 4 K~~llL~l~LA~lLli 19 (95)
T PF07172_consen 4 KAFLLLGLLLAALLLI 19 (95)
T ss_pred hHHHHHHHHHHHHHHH
Confidence 3444444444443333
No 259
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=43.50 E-value=41 Score=26.69 Aligned_cols=33 Identities=24% Similarity=0.267 Sum_probs=25.1
Q ss_pred HHHHHHHHhcCCCeEEEEeChHHHHHHHHHHhC
Q 024392 153 QIVDFLKEIVKEPAVLVGNSLGGFAALVAAVGL 185 (268)
Q Consensus 153 ~~~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~ 185 (268)
-+.+.+++.+...-.+.|-|.|+.++..++...
T Consensus 16 Gvl~~L~e~~~~~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 16 GALKALEEAGILKKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred HHHHHHHHcCCCcceEEEECHHHHHHHHHHcCC
Confidence 344455555666678999999999999998754
No 260
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=43.01 E-value=40 Score=28.82 Aligned_cols=33 Identities=24% Similarity=0.229 Sum_probs=26.8
Q ss_pred HHHHHHHHhcCCCeEEEEeChHHHHHHHHHHhC
Q 024392 153 QIVDFLKEIVKEPAVLVGNSLGGFAALVAAVGL 185 (268)
Q Consensus 153 ~~~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~ 185 (268)
-+.+.+++.++..-.+.|-|+|+.++..++...
T Consensus 27 GVL~aLeE~gi~~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 27 GILQALEEAGIPIDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHHHHHHcCCCccEEEEECHHHHHHHHHHcCC
Confidence 455666777887778999999999999998764
No 261
>PF03283 PAE: Pectinacetylesterase
Probab=42.28 E-value=1.2e+02 Score=27.22 Aligned_cols=37 Identities=32% Similarity=0.412 Sum_probs=24.9
Q ss_pred CCCeEEEEeChHHHHHHHHHH----hCCCccCeEEEecCCC
Q 024392 163 KEPAVLVGNSLGGFAALVAAV----GLPDQVTGVALLNSAG 199 (268)
Q Consensus 163 ~~~~~lvG~S~Gg~~a~~~a~----~~p~~v~~lvl~~~~~ 199 (268)
.++++|.|.|-||.-++..+. ..|..++-..+.++..
T Consensus 155 a~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~DsG~ 195 (361)
T PF03283_consen 155 AKQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDSGF 195 (361)
T ss_pred cceEEEeccChHHHHHHHHHHHHHHHhccCceEEEeccccc
Confidence 468999999999998776543 4565444444445543
No 262
>COG3933 Transcriptional antiterminator [Transcription]
Probab=41.46 E-value=1.8e+02 Score=26.96 Aligned_cols=71 Identities=14% Similarity=0.255 Sum_probs=53.2
Q ss_pred CcEEEECCCCCChhhHHHhHHHHHhcCeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHHhcCCCeEEEEeChHHHHH
Q 024392 99 SPVVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVKEPAVLVGNSLGGFAA 178 (268)
Q Consensus 99 ~~vv~lHG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~lvG~S~Gg~~a 178 (268)
..||+.||...- .+....+..|-..--+.++|.| .+.+..+..+.+.+.+++.+..+=+++=-.||....
T Consensus 110 ~vIiiAHG~sTA-SSmaevanrLL~~~~~~aiDMP---------Ldvsp~~vle~l~e~~k~~~~~~GlllLVDMGSL~~ 179 (470)
T COG3933 110 KVIIIAHGYSTA-SSMAEVANRLLGEEIFIAIDMP---------LDVSPSDVLEKLKEYLKERDYRSGLLLLVDMGSLTS 179 (470)
T ss_pred eEEEEecCcchH-HHHHHHHHHHhhccceeeecCC---------CcCCHHHHHHHHHHHHHhcCccCceEEEEecchHHH
Confidence 478999998753 4555667676666778899987 467788888999999998887775566668887644
Q ss_pred H
Q 024392 179 L 179 (268)
Q Consensus 179 ~ 179 (268)
.
T Consensus 180 f 180 (470)
T COG3933 180 F 180 (470)
T ss_pred H
Confidence 4
No 263
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=41.07 E-value=22 Score=29.62 Aligned_cols=35 Identities=37% Similarity=0.428 Sum_probs=24.4
Q ss_pred CCcEEEECCCCCChhhHHHhHHHHHhc-CeEEEEcC
Q 024392 98 GSPVVLIHGFGASAFHWRYNIPELAKR-YKVYAVDL 132 (268)
Q Consensus 98 ~~~vv~lHG~~~~~~~~~~~~~~l~~~-~~v~~~d~ 132 (268)
-|.+++.||+++..+........++.. +.++..+.
T Consensus 49 ~p~v~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 84 (299)
T COG1073 49 LPAVVFLHGFGSSKEQSLGYAVLLAEKGYRVLAGDA 84 (299)
T ss_pred CceEEeccCccccccCcchHHHHhhhceeEEeeecc
Confidence 467999999998887654455566666 66666654
No 264
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=41.02 E-value=1 Score=37.90 Aligned_cols=100 Identities=18% Similarity=-0.002 Sum_probs=55.8
Q ss_pred CCcEEEECCCCCChhhHHHhH-HHHHhc-CeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHH----HhcCCCeEEEEe
Q 024392 98 GSPVVLIHGFGASAFHWRYNI-PELAKR-YKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLK----EIVKEPAVLVGN 171 (268)
Q Consensus 98 ~~~vv~lHG~~~~~~~~~~~~-~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~lvG~ 171 (268)
+..++..||...+......+. ..+... +.++..|+++++.+.+............++.+++. .....++.+.|.
T Consensus 88 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 167 (299)
T COG1073 88 GESGGDPRGLADSEGYAEDFSAAVLLLLSEGVLDKDYRLLGASLGPRILAGLSLGGPSAGALLAWGPTRLDASRIVVWGE 167 (299)
T ss_pred cccccccccccCccccccccchhheeeeccccccHHHHHHhhhcCcceEEEEEeeccchHHHhhcchhHHHhhcccceee
Confidence 446778888755544333332 333333 88999999999988654321111100111222222 223458899999
Q ss_pred ChHHHHHHHHHHh----CCCccCeEEEecC
Q 024392 172 SLGGFAALVAAVG----LPDQVTGVALLNS 197 (268)
Q Consensus 172 S~Gg~~a~~~a~~----~p~~v~~lvl~~~ 197 (268)
|+||..++..... .++.++.++.-.+
T Consensus 168 s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (299)
T COG1073 168 SLGGALALLLLGANPELARELIDYLITPGG 197 (299)
T ss_pred ccCceeeccccccchHHHHhhhhhhccCCC
Confidence 9999988886554 2334444444444
No 265
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=40.92 E-value=50 Score=27.20 Aligned_cols=32 Identities=28% Similarity=0.425 Sum_probs=24.7
Q ss_pred HHHHHHHhcCCCeEEEEeChHHHHHHHHHHhC
Q 024392 154 IVDFLKEIVKEPAVLVGNSLGGFAALVAAVGL 185 (268)
Q Consensus 154 ~~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~ 185 (268)
+.+.+++.+.+.-.+.|-|.|+.++..++...
T Consensus 18 vL~aL~e~gi~~~~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 18 FLAALLEMGLEPSAISGTSAGALVGGLFASGI 49 (221)
T ss_pred HHHHHHHcCCCceEEEEeCHHHHHHHHHHcCC
Confidence 44455555777678999999999999998754
No 266
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=40.19 E-value=35 Score=32.32 Aligned_cols=31 Identities=19% Similarity=0.221 Sum_probs=24.1
Q ss_pred HHHH-HHhcCCCeEEEEeChHHHHHHHHHHhC
Q 024392 155 VDFL-KEIVKEPAVLVGNSLGGFAALVAAVGL 185 (268)
Q Consensus 155 ~~~l-~~~~~~~~~lvG~S~Gg~~a~~~a~~~ 185 (268)
.+++ +..|+++-.++|||+|=+.|+..+.-.
T Consensus 255 a~ll~~~~GI~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 255 TQLLCDEFAIKPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred HHHHHHhcCCCCCEEeecCHHHHHHHHHhCCC
Confidence 3445 467899999999999988888777644
No 267
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=38.29 E-value=54 Score=26.81 Aligned_cols=34 Identities=29% Similarity=0.475 Sum_probs=26.8
Q ss_pred HHHHHHHHhcCCCeEEEEeChHHHHHHHHHHhCC
Q 024392 153 QIVDFLKEIVKEPAVLVGNSLGGFAALVAAVGLP 186 (268)
Q Consensus 153 ~~~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p 186 (268)
-+.+.+.+.+...-.+.|-|.|+.++..++...+
T Consensus 15 Gvl~aL~e~g~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 15 GVLKALAEAGIEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCc
Confidence 3455566667766689999999999999998775
No 268
>PRK15488 thiosulfate reductase PhsA; Provisional
Probab=37.79 E-value=2.4e+02 Score=27.98 Aligned_cols=20 Identities=25% Similarity=0.363 Sum_probs=12.6
Q ss_pred hhhhHHHHHHHHHHHHHHHH
Q 024392 39 EISRRTFVFRGIVASGASVI 58 (268)
Q Consensus 39 ~m~rr~~~~~~~~~~~~~~~ 58 (268)
.|+||.|+..+.+++++.++
T Consensus 2 ~~sRR~Flk~~~~~~~~~~~ 21 (759)
T PRK15488 2 SLSRRDFLKGAGAGCAACAL 21 (759)
T ss_pred CccHHHHHHHHHHHHHHHHh
Confidence 36899998765555444443
No 269
>KOG0781 consensus Signal recognition particle receptor, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=35.69 E-value=1.2e+02 Score=28.48 Aligned_cols=86 Identities=19% Similarity=0.270 Sum_probs=52.8
Q ss_pred EEECCCCCChhhHHHh-HHHHHhc-CeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHHhcCCCeEEEEeChHHHHHH
Q 024392 102 VLIHGFGASAFHWRYN-IPELAKR-YKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVKEPAVLVGNSLGGFAAL 179 (268)
Q Consensus 102 v~lHG~~~~~~~~~~~-~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~lvG~S~Gg~~a~ 179 (268)
+|--|++.+...-... +++-.++ |.|+.+|-.|.-.... .+...+..+++.-.++.|..||.-+=|.=++
T Consensus 442 lfekGYgkd~a~vak~AI~~a~~~gfDVvLiDTAGR~~~~~--------~lm~~l~k~~~~~~pd~i~~vgealvg~dsv 513 (587)
T KOG0781|consen 442 LFEKGYGKDAAGVAKEAIQEARNQGFDVVLIDTAGRMHNNA--------PLMTSLAKLIKVNKPDLILFVGEALVGNDSV 513 (587)
T ss_pred HHhhhcCCChHHHHHHHHHHHHhcCCCEEEEeccccccCCh--------hHHHHHHHHHhcCCCceEEEehhhhhCcHHH
Confidence 4445666665443333 3333334 9999999887643322 2345666677666778899999888777665
Q ss_pred HHHHh---------CCCccCeEEEe
Q 024392 180 VAAVG---------LPDQVTGVALL 195 (268)
Q Consensus 180 ~~a~~---------~p~~v~~lvl~ 195 (268)
.-+.. .|..++++++.
T Consensus 514 ~q~~~fn~al~~~~~~r~id~~~lt 538 (587)
T KOG0781|consen 514 DQLKKFNRALADHSTPRLIDGILLT 538 (587)
T ss_pred HHHHHHHHHHhcCCCccccceEEEE
Confidence 54432 24457777764
No 270
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=35.51 E-value=2.4e+02 Score=22.74 Aligned_cols=74 Identities=18% Similarity=0.201 Sum_probs=44.7
Q ss_pred HHHhHHHHHhc-CeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHHhcCCCeEEEEeChHHHHHHHHHHhCC--CccC
Q 024392 114 WRYNIPELAKR-YKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVKEPAVLVGNSLGGFAALVAAVGLP--DQVT 190 (268)
Q Consensus 114 ~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p--~~v~ 190 (268)
.....+.+.++ +.++.+|-+|... ...+..+++..+++......++++=-+..+.-.+..+..+- -.++
T Consensus 72 ~~~~l~~~~~~~~D~vlIDT~Gr~~--------~d~~~~~el~~~~~~~~~~~~~LVlsa~~~~~~~~~~~~~~~~~~~~ 143 (196)
T PF00448_consen 72 AREALEKFRKKGYDLVLIDTAGRSP--------RDEELLEELKKLLEALNPDEVHLVLSATMGQEDLEQALAFYEAFGID 143 (196)
T ss_dssp HHHHHHHHHHTTSSEEEEEE-SSSS--------THHHHHHHHHHHHHHHSSSEEEEEEEGGGGGHHHHHHHHHHHHSSTC
T ss_pred HHHHHHHHhhcCCCEEEEecCCcch--------hhHHHHHHHHHHhhhcCCccceEEEecccChHHHHHHHHHhhcccCc
Confidence 33445555555 9999999997742 22344677777777776666666655555555554443321 2478
Q ss_pred eEEEe
Q 024392 191 GVALL 195 (268)
Q Consensus 191 ~lvl~ 195 (268)
++|+.
T Consensus 144 ~lIlT 148 (196)
T PF00448_consen 144 GLILT 148 (196)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 88854
No 271
>PRK06215 hypothetical protein; Provisional
Probab=35.04 E-value=83 Score=26.37 Aligned_cols=14 Identities=29% Similarity=0.458 Sum_probs=8.5
Q ss_pred EeeCCeEEEEEEcc
Q 024392 83 WTWRGHKIHYVVQG 96 (268)
Q Consensus 83 ~~~~g~~~~~~~~g 96 (268)
.+.+++.+.=..+|
T Consensus 47 ~~~g~Ytv~NN~WG 60 (238)
T PRK06215 47 WSNGGYTLYNDVWG 60 (238)
T ss_pred eeeCCEEEEccccC
Confidence 45566666655555
No 272
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=35.04 E-value=59 Score=25.49 Aligned_cols=33 Identities=24% Similarity=0.357 Sum_probs=24.9
Q ss_pred HHHHHHHhcCCCeEEEEeChHHHHHHHHHHhCC
Q 024392 154 IVDFLKEIVKEPAVLVGNSLGGFAALVAAVGLP 186 (268)
Q Consensus 154 ~~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p 186 (268)
+.+.+++.+...-.+.|-|.|+.++..++....
T Consensus 18 vl~~L~e~g~~~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 18 VLRALEEEGIEIDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred HHHHHHHCCCCeeEEEEeCHHHHHHHHHHcCCC
Confidence 344445556666689999999999999987654
No 273
>PRK14018 trifunctional thioredoxin/methionine sulfoxide reductase A/B protein; Provisional
Probab=34.22 E-value=4.1e+02 Score=25.20 Aligned_cols=94 Identities=12% Similarity=0.075 Sum_probs=43.4
Q ss_pred hhhHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCceEEeeCCeEEEEEEccCCCcEEEECC-CCCChhhHHHhH
Q 024392 40 ISRRTFVFRGIVASGASVIGSSLITEPSPGMERLPFKPEGYNFWTWRGHKIHYVVQGEGSPVVLIHG-FGASAFHWRYNI 118 (268)
Q Consensus 40 m~rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~vv~lHG-~~~~~~~~~~~~ 118 (268)
|+.+.+++.+.+.++++.+.+.............+...+...+...+|..+.-. ..+++||.+.. |......-.+.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~s~c~~~~~~~~~~~~~~~lP~f~l~D~dG~~v~ls--kGKpVvV~FWATWCppCk~emP~L 78 (521)
T PRK14018 1 MKHRTFFSLCAKFGCLLALGACSPKILDAGTATVPHTLSTLKTADNRPASVYLK--KDKPTLIKFWASWCPLCLSELGET 78 (521)
T ss_pred CcchHHHHHHHHHHHHHhhcccccccCccccccccCCCCCeEeecCCCceeecc--CCCEEEEEEEcCCCHHHHHHHHHH
Confidence 344555555555555444443433332222222222233455566777665443 33455555554 333333333333
Q ss_pred HHHHh----c-CeEEEEcCCCC
Q 024392 119 PELAK----R-YKVYAVDLLGF 135 (268)
Q Consensus 119 ~~l~~----~-~~v~~~d~~G~ 135 (268)
..+.+ . ..|+.+...+.
T Consensus 79 ~eL~~e~k~~~v~VI~Vs~~~~ 100 (521)
T PRK14018 79 EKWAQDAKFSSANLITVASPGF 100 (521)
T ss_pred HHHHHHhccCCeEEEEEecccc
Confidence 33433 2 56777765443
No 274
>COG0218 Predicted GTPase [General function prediction only]
Probab=32.97 E-value=60 Score=26.46 Aligned_cols=12 Identities=25% Similarity=0.540 Sum_probs=6.3
Q ss_pred HHHHHHHHhcCC
Q 024392 153 QIVDFLKEIVKE 164 (268)
Q Consensus 153 ~~~~~l~~~~~~ 164 (268)
++.+++.+.+..
T Consensus 126 em~~~l~~~~i~ 137 (200)
T COG0218 126 EMIEFLLELGIP 137 (200)
T ss_pred HHHHHHHHcCCC
Confidence 455555555543
No 275
>PRK15412 thiol:disulfide interchange protein DsbE; Provisional
Probab=32.76 E-value=1.7e+02 Score=23.16 Aligned_cols=34 Identities=6% Similarity=0.118 Sum_probs=18.9
Q ss_pred CcEE-EECCCCCChhhHHHhHHHHHhc-CeEEEEcC
Q 024392 99 SPVV-LIHGFGASAFHWRYNIPELAKR-YKVYAVDL 132 (268)
Q Consensus 99 ~~vv-~lHG~~~~~~~~~~~~~~l~~~-~~v~~~d~ 132 (268)
++|| |..-|........+....+.+. +.|+.++.
T Consensus 70 ~vvv~FwatwC~~C~~e~p~l~~l~~~~~~vi~v~~ 105 (185)
T PRK15412 70 PVLLNVWATWCPTCRAEHQYLNQLSAQGIRVVGMNY 105 (185)
T ss_pred EEEEEEECCCCHHHHHHHHHHHHHHHcCCEEEEEEC
Confidence 4444 3433444444444555666665 78888874
No 276
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=32.08 E-value=1.3e+02 Score=24.09 Aligned_cols=59 Identities=22% Similarity=0.370 Sum_probs=33.3
Q ss_pred CCcEEEECCCCCCh---hhHHHhHHHHHhc---CeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 024392 98 GSPVVLIHGFGASA---FHWRYNIPELAKR---YKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKE 160 (268)
Q Consensus 98 ~~~vv~lHG~~~~~---~~~~~~~~~l~~~---~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~ 160 (268)
.+|++++||..... ..-..+.+.|.+. ...+.+.--|||..... ...++.+.+.+++++
T Consensus 144 ~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~----~~~~~~~~~~~f~~~ 208 (213)
T PF00326_consen 144 KPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPE----NRRDWYERILDFFDK 208 (213)
T ss_dssp GSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHH----HHHHHHHHHHHHHHH
T ss_pred CCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCch----hHHHHHHHHHHHHHH
Confidence 57999999977653 2334455666654 45555555667544332 222445556666554
No 277
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=31.99 E-value=2.5e+02 Score=22.49 Aligned_cols=63 Identities=17% Similarity=0.138 Sum_probs=37.2
Q ss_pred CcEEEECCCCCCh---hhHHHhHHHHHhc---CeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHHh
Q 024392 99 SPVVLIHGFGASA---FHWRYNIPELAKR---YKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEI 161 (268)
Q Consensus 99 ~~vv~lHG~~~~~---~~~~~~~~~l~~~---~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~ 161 (268)
.|++++||-.... +....+.+.+.+. +.+..++--+||........++.....+....+++.+
T Consensus 146 ~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff 214 (218)
T PF01738_consen 146 APVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFF 214 (218)
T ss_dssp S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHH
T ss_pred CCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHH
Confidence 4788888866543 2344556666333 7888888888998877655666665555566666554
No 278
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=30.73 E-value=93 Score=24.21 Aligned_cols=32 Identities=22% Similarity=0.319 Sum_probs=23.9
Q ss_pred HHHHHHHhcCCCeEEEEeChHHHHHHHHHHhC
Q 024392 154 IVDFLKEIVKEPAVLVGNSLGGFAALVAAVGL 185 (268)
Q Consensus 154 ~~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~ 185 (268)
+.+.+++.+...-.+.|-|.|+.++..++...
T Consensus 18 vl~~L~~~~~~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 18 VLKALEEAGIPIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHHHHHcCCCeeEEEEECHHHHHHHHHHcCC
Confidence 34444555665668999999999999998654
No 279
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=30.29 E-value=2.6e+02 Score=25.80 Aligned_cols=69 Identities=23% Similarity=0.256 Sum_probs=47.9
Q ss_pred HHHHhc-CeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHHhcCCCeEEEEeChHHHHHHHHHHhCCCc--cCeEEEe
Q 024392 119 PELAKR-YKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVKEPAVLVGNSLGGFAALVAAVGLPDQ--VTGVALL 195 (268)
Q Consensus 119 ~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~--v~~lvl~ 195 (268)
+.+... |.|+.+|-.|.=. --+++.+.+.++-+.+.++.+.+|=-++=|.-|...|..+.+. +.|+|+.
T Consensus 176 ~~ak~~~~DvvIvDTAGRl~--------ide~Lm~El~~Ik~~~~P~E~llVvDam~GQdA~~~A~aF~e~l~itGvIlT 247 (451)
T COG0541 176 EKAKEEGYDVVIVDTAGRLH--------IDEELMDELKEIKEVINPDETLLVVDAMIGQDAVNTAKAFNEALGITGVILT 247 (451)
T ss_pred HHHHHcCCCEEEEeCCCccc--------ccHHHHHHHHHHHhhcCCCeEEEEEecccchHHHHHHHHHhhhcCCceEEEE
Confidence 334444 6777777665411 1244566777777777888899999999999999998877654 6777764
No 280
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=30.21 E-value=90 Score=26.31 Aligned_cols=35 Identities=20% Similarity=0.200 Sum_probs=25.6
Q ss_pred HHHHHHHHhcCC-CeEEEEeChHHHHHHHHHHhCCC
Q 024392 153 QIVDFLKEIVKE-PAVLVGNSLGGFAALVAAVGLPD 187 (268)
Q Consensus 153 ~~~~~l~~~~~~-~~~lvG~S~Gg~~a~~~a~~~p~ 187 (268)
-+.+.+.+.+.. .=.++|-|.|+.++..++.....
T Consensus 15 Gvl~al~e~~~~~fd~i~GtSaGAi~a~~~~~g~~~ 50 (266)
T cd07208 15 GVLDAFLEAGIRPFDLVIGVSAGALNAASYLSGQRG 50 (266)
T ss_pred HHHHHHHHcCCCCCCEEEEECHHHHhHHHHHhCCcc
Confidence 344445555665 44899999999999999887654
No 281
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=28.78 E-value=47 Score=24.95 Aligned_cols=19 Identities=16% Similarity=0.328 Sum_probs=15.9
Q ss_pred CCCcEEEECCCCCChhhHH
Q 024392 97 EGSPVVLIHGFGASAFHWR 115 (268)
Q Consensus 97 ~~~~vv~lHG~~~~~~~~~ 115 (268)
++|.|+-+||+.|.+.+|-
T Consensus 51 ~KpLVlSfHG~tGtGKn~v 69 (127)
T PF06309_consen 51 RKPLVLSFHGWTGTGKNFV 69 (127)
T ss_pred CCCEEEEeecCCCCcHHHH
Confidence 5678889999999998764
No 282
>PRK15367 type III secretion system protein SsaD; Provisional
Probab=28.56 E-value=4e+02 Score=24.23 Aligned_cols=56 Identities=13% Similarity=0.076 Sum_probs=37.4
Q ss_pred EEEECCCCCChhhHHHhHHHHHhcCeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHHhcCCCeEE
Q 024392 101 VVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVKEPAVL 168 (268)
Q Consensus 101 vv~lHG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l 168 (268)
.|.+-|...++.....+..+|..+--.|.-+. .+.++..+.+.+++.+.|.+.+-+
T Consensus 165 ~l~LsGyC~~s~~~~~Lq~~L~~~gi~yr~~l------------vc~D~L~~~V~~IL~~~GY~~i~V 220 (395)
T PRK15367 165 SLQLSGYCSSSEQMQKVRATLESWGVMYRDGV------------ICDDLLIREVQDVLIKMGYPHAEV 220 (395)
T ss_pred cEEEEEEECChHHHHHHHHHHHhcCceeeecc------------eeHHHHHHHHHHHHHHcCcCceEE
Confidence 35899999999888888888877533332222 255666777777777776655444
No 283
>PF11191 DUF2782: Protein of unknown function (DUF2782); InterPro: IPR021357 This is a bacterial family of proteins whose function is unknown.
Probab=28.45 E-value=2.2e+02 Score=20.31 Aligned_cols=23 Identities=22% Similarity=0.213 Sum_probs=10.3
Q ss_pred EEeeCCeEEE-EEEccCCCcEEEE
Q 024392 82 FWTWRGHKIH-YVVQGEGSPVVLI 104 (268)
Q Consensus 82 ~~~~~g~~~~-~~~~g~~~~vv~l 104 (268)
+..-++.++. |...|+-..|-+.
T Consensus 43 i~~~~~~~ieEyRv~G~l~~IkV~ 66 (105)
T PF11191_consen 43 IIEDGGSTIEEYRVNGQLYMIKVQ 66 (105)
T ss_pred EEecCCcEEEEEEECCeEeeEEEE
Confidence 3344444443 5555543334333
No 284
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=28.34 E-value=4.7e+02 Score=24.04 Aligned_cols=100 Identities=22% Similarity=0.170 Sum_probs=57.6
Q ss_pred cEEEECCCCCChhhHHHhHHHHHhc-CeEEEEcCCCCCCC----Cc--ccccCCHHHHHHHHHHHHHHhcCCCeEEEEeC
Q 024392 100 PVVLIHGFGASAFHWRYNIPELAKR-YKVYAVDLLGFGWS----EK--AIIEYDAMVWKDQIVDFLKEIVKEPAVLVGNS 172 (268)
Q Consensus 100 ~vv~lHG~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s----~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~lvG~S 172 (268)
+|+++--..+..+.-....+.+.+. .-|...|..++=.- ++ .....+++.+.+++......-....-+|.|--
T Consensus 50 ~villSd~~G~~d~~~s~a~al~~~~Alv~~vd~~~ylaaL~~dd~ecvylisd~Ealsr~~Qr~a~~g~yr~PVl~g~g 129 (456)
T COG3946 50 LVILLSDEAGIGDQERSRADALLARGALVAPVDLGAYLAALGADDNECVYLISDFEALSREAQRAADLGVYRLPVLTGPG 129 (456)
T ss_pred eeEEEEcccChhhhhcchhHHHhhcCCeeeccccchhhhccccCCCcceEEehhHHHHhHHHHHHhhccCcccceEeecC
Confidence 4555544344444333445555555 88888887765211 11 12334555555555554433223345788999
Q ss_pred hHHHHHHHHHHhCCC-ccCeEEEecCCC
Q 024392 173 LGGFAALVAAVGLPD-QVTGVALLNSAG 199 (268)
Q Consensus 173 ~Gg~~a~~~a~~~p~-~v~~lvl~~~~~ 199 (268)
.||.+++..+.+.|+ .+.+.+.+++..
T Consensus 130 ~Gg~~A~asaaqSp~atlag~Vsldp~~ 157 (456)
T COG3946 130 QGGTLAYASAAQSPDATLAGAVSLDPTP 157 (456)
T ss_pred CCcHHHHHHHhhChhhhhcCccCCCCCC
Confidence 999999998888775 355555555543
No 285
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=28.21 E-value=2.1e+02 Score=22.34 Aligned_cols=50 Identities=18% Similarity=0.019 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHh--cCCCeEEEEeChHHHHHHHHHHhCCCccCeEEEecC
Q 024392 148 MVWKDQIVDFLKEI--VKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNS 197 (268)
Q Consensus 148 ~~~~~~~~~~l~~~--~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~ 197 (268)
++..+++.++++.+ ..++|++.|-|..|..-+.+....++.++.++=.++
T Consensus 51 ~~~~~~l~~~L~~~~~~gk~I~~yGA~~kg~tlln~~g~~~~~I~~vvD~np 102 (160)
T PF08484_consen 51 EQSKAELREFLEKLKAEGKRIAGYGAGAKGNTLLNYFGLDNDLIDYVVDDNP 102 (160)
T ss_dssp HHHHHHHHHHHHHHHHTT--EEEE---SHHHHHHHHHT--TTTS--EEES-G
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEECcchHHHHHHHHhCCCcceeEEEEeCCh
Confidence 33444555555544 246899999999999988888777777888876665
No 286
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=27.85 E-value=30 Score=26.96 Aligned_cols=45 Identities=24% Similarity=0.338 Sum_probs=25.7
Q ss_pred CCCCCCCCc---ccccCCHHHHHHHH----HHHHHHh----cCCCeEEEEeChHHH
Q 024392 132 LLGFGWSEK---AIIEYDAMVWKDQI----VDFLKEI----VKEPAVLVGNSLGGF 176 (268)
Q Consensus 132 ~~G~G~s~~---~~~~~~~~~~~~~~----~~~l~~~----~~~~~~lvG~S~Gg~ 176 (268)
+-|||+... .-..++..++++-+ ..+.+.. .+++|.|+|.|++..
T Consensus 61 lVGHG~~~~~~~~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 61 LVGHGRDEFNNQTLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EE--EESSTSSSEETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred EEEeCCCcCCCceeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 347776622 12456777877777 3444444 256899999999876
No 287
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=27.32 E-value=1.2e+02 Score=23.95 Aligned_cols=72 Identities=24% Similarity=0.207 Sum_probs=46.2
Q ss_pred EEECCCCCChhhHHHhHHHHHhcCeEEEEcCCCCCCCCccc------ccCCHHHHHHHHHHHHHHhcCCCeEEEEeChHH
Q 024392 102 VLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGWSEKAI------IEYDAMVWKDQIVDFLKEIVKEPAVLVGNSLGG 175 (268)
Q Consensus 102 v~lHG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~------~~~~~~~~~~~~~~~l~~~~~~~~~lvG~S~Gg 175 (268)
|++-|.+++..+-.+++..|..+|.--.+-+|..-.|.... .+|..+. -....++.++..-=+|+|.|--|
T Consensus 44 vl~cGNGgSaadAqHfaael~gRf~~eR~~lpaIaLt~dsS~lTai~NDy~yd~---vFsRqveA~g~~GDvLigISTSG 120 (176)
T COG0279 44 VLACGNGGSAADAQHFAAELTGRFEKERPSLPAIALSTDSSVLTAIANDYGYDE---VFSRQVEALGQPGDVLIGISTSG 120 (176)
T ss_pred EEEECCCcchhhHHHHHHHHhhHHHhcCCCCCeeEeecccHHHhhhhccccHHH---HHHHHHHhcCCCCCEEEEEeCCC
Confidence 56678888888878888888877776666666555443221 2333332 23344556666666899999887
Q ss_pred H
Q 024392 176 F 176 (268)
Q Consensus 176 ~ 176 (268)
.
T Consensus 121 N 121 (176)
T COG0279 121 N 121 (176)
T ss_pred C
Confidence 6
No 288
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=27.05 E-value=66 Score=29.50 Aligned_cols=37 Identities=19% Similarity=0.314 Sum_probs=27.5
Q ss_pred HHHHHHHHhcCCCeEEEEeChHHHHHHHHHHhCCCcc
Q 024392 153 QIVDFLKEIVKEPAVLVGNSLGGFAALVAAVGLPDQV 189 (268)
Q Consensus 153 ~~~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v 189 (268)
-+.+.+.+.+..+-++.|-|.|+.+|..++...++++
T Consensus 90 GVLkaL~E~gl~p~vIsGTSaGAivAal~as~~~eel 126 (421)
T cd07230 90 GVLKALFEANLLPRIISGSSAGSIVAAILCTHTDEEI 126 (421)
T ss_pred HHHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCHHHH
Confidence 3444554556666689999999999999998766554
No 289
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=26.52 E-value=3.8e+02 Score=22.36 Aligned_cols=57 Identities=16% Similarity=0.290 Sum_probs=30.3
Q ss_pred cEEEECCCCCChhhHHHhHHH-HHhc-C-eEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHHhcCCCeEEE
Q 024392 100 PVVLIHGFGASAFHWRYNIPE-LAKR-Y-KVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVKEPAVLV 169 (268)
Q Consensus 100 ~vv~lHG~~~~~~~~~~~~~~-l~~~-~-~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~lv 169 (268)
.|++.||...++.......+. +.+. | +|+....-||-. .+++.+.++.-+.+.+.|+
T Consensus 140 ~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~ve~yP~-------------~d~vi~~l~~~~~~~v~L~ 199 (265)
T COG4822 140 LVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAVEGYPL-------------VDTVIEYLRKNGIKEVHLI 199 (265)
T ss_pred EEEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEecCCCc-------------HHHHHHHHHHcCCceEEEe
Confidence 567777776666543333333 3333 4 555555544411 3556666666666655444
No 290
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=26.44 E-value=5.2e+02 Score=23.86 Aligned_cols=69 Identities=19% Similarity=0.230 Sum_probs=41.3
Q ss_pred HHHHHh-cCeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHHhcCCCeEEEEeChHHHHHHHHHHhCCC--ccCeEEE
Q 024392 118 IPELAK-RYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVKEPAVLVGNSLGGFAALVAAVGLPD--QVTGVAL 194 (268)
Q Consensus 118 ~~~l~~-~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~--~v~~lvl 194 (268)
.+.+.+ .|.++.+|-+|.-.. -..+.+.+..+.+...++.+++|--++-|.-+...+..+.+ .+.++|+
T Consensus 175 l~~~~~~~~DvViIDTaGr~~~--------d~~lm~El~~i~~~~~p~e~lLVlda~~Gq~a~~~a~~F~~~~~~~g~Il 246 (429)
T TIGR01425 175 VEKFKKENFDIIIVDTSGRHKQ--------EDSLFEEMLQVAEAIQPDNIIFVMDGSIGQAAEAQAKAFKDSVDVGSVII 246 (429)
T ss_pred HHHHHhCCCCEEEEECCCCCcc--------hHHHHHHHHHHhhhcCCcEEEEEeccccChhHHHHHHHHHhccCCcEEEE
Confidence 344444 499999999985322 12334555555555566667777767666666655555432 3566664
No 291
>PF07521 RMMBL: RNA-metabolising metallo-beta-lactamase; InterPro: IPR011108 The metallo-beta-lactamase fold contains five sequence motifs. The first four motifs are found in IPR001279 from INTERPRO and are common to all metallo-beta-lactamases. The fifth motif appears to be specific to function. This entry represents the fifth motif from metallo-beta-lactamases involved in RNA metabolism [].; PDB: 3ZQ4_D 2I7T_A 2I7V_A 2YCB_B 3BK1_A 3T3N_A 3BK2_A 3T3O_A 3AF5_A 3AF6_A ....
Probab=26.06 E-value=1.5e+02 Score=17.36 Aligned_cols=32 Identities=19% Similarity=0.501 Sum_probs=21.4
Q ss_pred CeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHHhcCCCeEEE
Q 024392 125 YKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVKEPAVLV 169 (268)
Q Consensus 125 ~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~lv 169 (268)
..|..+|+-||+. .+++..+++.+.+++++++
T Consensus 7 a~v~~~~fSgHad-------------~~~L~~~i~~~~p~~vilV 38 (43)
T PF07521_consen 7 ARVEQIDFSGHAD-------------REELLEFIEQLNPRKVILV 38 (43)
T ss_dssp SEEEESGCSSS-B-------------HHHHHHHHHHHCSSEEEEE
T ss_pred EEEEEEeecCCCC-------------HHHHHHHHHhcCCCEEEEe
Confidence 4566677666642 3788888888877666655
No 292
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=25.83 E-value=1.2e+02 Score=25.12 Aligned_cols=34 Identities=32% Similarity=0.391 Sum_probs=25.1
Q ss_pred HHHHHHHHhcCC--CeEEEEeChHHHHHHHHHHhCC
Q 024392 153 QIVDFLKEIVKE--PAVLVGNSLGGFAALVAAVGLP 186 (268)
Q Consensus 153 ~~~~~l~~~~~~--~~~lvG~S~Gg~~a~~~a~~~p 186 (268)
-+.+.+.+.++. .-.+.|-|.|+.++..++...+
T Consensus 16 GVl~~L~e~gi~~~~~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 16 GVLSLLIEAGVINETTPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred HHHHHHHHcCCCCCCCEEEEEcHHHHHHHHHHcCCC
Confidence 344555555654 4489999999999999988654
No 293
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=24.98 E-value=85 Score=27.50 Aligned_cols=22 Identities=41% Similarity=0.599 Sum_probs=17.7
Q ss_pred cCCCeEEEEeChHHHHHHHHHH
Q 024392 162 VKEPAVLVGNSLGGFAALVAAV 183 (268)
Q Consensus 162 ~~~~~~lvG~S~Gg~~a~~~a~ 183 (268)
+.++.++.|||+|=+.|+..+.
T Consensus 83 ~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 83 GVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCCCceeecccHhHHHHHHHcc
Confidence 4678899999999887776654
No 294
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=24.38 E-value=82 Score=28.60 Aligned_cols=40 Identities=18% Similarity=0.223 Sum_probs=29.4
Q ss_pred HHHHHHHHhcCCCeEEEEeChHHHHHHHHHHhCCCccCeE
Q 024392 153 QIVDFLKEIVKEPAVLVGNSLGGFAALVAAVGLPDQVTGV 192 (268)
Q Consensus 153 ~~~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~l 192 (268)
-+...+.+.|..+-++.|-|.|+.+|..++...++.+..+
T Consensus 100 Gv~kaL~e~gl~p~~i~GtS~Gaivaa~~a~~~~~e~~~~ 139 (391)
T cd07229 100 GVVKALWLRGLLPRIITGTATGALIAALVGVHTDEELLRF 139 (391)
T ss_pred HHHHHHHHcCCCCceEEEecHHHHHHHHHHcCCHHHHHHH
Confidence 3445555667777789999999999999998655554443
No 295
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=23.99 E-value=55 Score=28.82 Aligned_cols=33 Identities=27% Similarity=0.354 Sum_probs=24.4
Q ss_pred HHHHHHHHhcCCCeEEEEeChHHHHHHHHHHhC
Q 024392 153 QIVDFLKEIVKEPAVLVGNSLGGFAALVAAVGL 185 (268)
Q Consensus 153 ~~~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~ 185 (268)
-+.+.+.+.+..+-++.|-|.|+.++..++...
T Consensus 85 GVlkaL~e~gl~p~~i~GsSaGAivaa~~~~~t 117 (323)
T cd07231 85 GVVRTLVEHQLLPRVIAGSSVGSIVCAIIATRT 117 (323)
T ss_pred HHHHHHHHcCCCCCEEEEECHHHHHHHHHHcCC
Confidence 344445555766778999999999999888653
No 296
>PRK14582 pgaB outer membrane N-deacetylase; Provisional
Probab=23.07 E-value=2.7e+02 Score=27.30 Aligned_cols=74 Identities=14% Similarity=0.084 Sum_probs=43.2
Q ss_pred CCCcEEEECCCCC----------ChhhHHHhHHHHHhc-CeEEEEcC-----CCCCCCCcc----cccCCHHHHHHHHHH
Q 024392 97 EGSPVVLIHGFGA----------SAFHWRYNIPELAKR-YKVYAVDL-----LGFGWSEKA----IIEYDAMVWKDQIVD 156 (268)
Q Consensus 97 ~~~~vv~lHG~~~----------~~~~~~~~~~~l~~~-~~v~~~d~-----~G~G~s~~~----~~~~~~~~~~~~~~~ 156 (268)
++-+||+.|.... +.+.++.+++.|.++ |+++.+|. .|....... ..+....+....+..
T Consensus 47 ~~~~VL~YH~V~d~~~~~~~~~Vspe~Fe~qL~~Lk~nGY~~ISl~el~~~~~g~~~LP~K~VaLTFDDGy~s~yt~A~P 126 (671)
T PRK14582 47 NGFVAIAYHDVEDEAADQRFMSVRTSALREQFAWLRENGYQPVSVAQILEAHRGGKPLPEKAVLLTFDDGYSSFYTRVFP 126 (671)
T ss_pred CceEEEEeCcccCCcccccccccCHHHHHHHHHHHHHCcCEEccHHHHHHHHhcCCCCCCCeEEEEEEcCCCchHHHHHH
Confidence 3457788887643 234678889999998 99998873 221111111 122222334456777
Q ss_pred HHHHhcCCC-eEEEE
Q 024392 157 FLKEIVKEP-AVLVG 170 (268)
Q Consensus 157 ~l~~~~~~~-~~lvG 170 (268)
++++.+..- ++++|
T Consensus 127 ILkkygvpATfFlvg 141 (671)
T PRK14582 127 ILQAFQWPAVWAPVG 141 (671)
T ss_pred HHHHcCCCEEEEEec
Confidence 888877653 34554
No 297
>PF10399 UCR_Fe-S_N: Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal; InterPro: IPR019470 This entry represents the TAT-signal region found in the iron-sulphur subunit of Ubiquinol-cytochrome C reductase (also known as the cytochrome bc1 complex). This enzymex is an oligomeric membrane protein complex that is a component of respiratory and photosynthetic electron transfer chains. It couples the transfer of electrons from ubiquinol to cytochrome c with the generation of a protein gradient across the membrane []. This entry is associated with IPR017941 from INTERPRO, IPR004192 from INTERPRO and IPR015248 from INTERPRO. ; GO: 0008121 ubiquinol-cytochrome-c reductase activity, 0055114 oxidation-reduction process; PDB: 1ZRT_R 2QJY_R 2FYN_L 2QJK_O 2QJP_I 2YIU_F.
Probab=22.77 E-value=1.2e+02 Score=17.84 Aligned_cols=8 Identities=38% Similarity=0.629 Sum_probs=4.6
Q ss_pred hhHHHHHH
Q 024392 41 SRRTFVFR 48 (268)
Q Consensus 41 ~rr~~~~~ 48 (268)
+||.|+..
T Consensus 10 ~RRdFL~~ 17 (41)
T PF10399_consen 10 TRRDFLTI 17 (41)
T ss_dssp HHHHHHHH
T ss_pred hHHHHHHH
Confidence 46666643
No 298
>PF02590 SPOUT_MTase: Predicted SPOUT methyltransferase; InterPro: IPR003742 This family of proteins are predicted to be SPOUT methyltransferases []. ; GO: 0008168 methyltransferase activity, 0006364 rRNA processing, 0005737 cytoplasm; PDB: 1VH0_E 4FAK_A 1TO0_G 1O6D_A 1NS5_B.
Probab=22.71 E-value=1.2e+02 Score=23.59 Aligned_cols=46 Identities=13% Similarity=0.265 Sum_probs=28.4
Q ss_pred HHHhcCeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHHhcC-CCeEEEEeChH
Q 024392 120 ELAKRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVK-EPAVLVGNSLG 174 (268)
Q Consensus 120 ~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~lvG~S~G 174 (268)
.+.++-.+++.|-.|. ..+..++++.+..+... |. +=++++|-+.|
T Consensus 63 ~i~~~~~~i~Ld~~Gk--------~~sS~~fA~~l~~~~~~-g~~~i~F~IGG~~G 109 (155)
T PF02590_consen 63 KIPPNDYVILLDERGK--------QLSSEEFAKKLERWMNQ-GKSDIVFIIGGADG 109 (155)
T ss_dssp TSHTTSEEEEE-TTSE--------E--HHHHHHHHHHHHHT-TS-EEEEEE-BTTB
T ss_pred hccCCCEEEEEcCCCc--------cCChHHHHHHHHHHHhc-CCceEEEEEecCCC
Confidence 3444567889998865 45666667777666654 33 34689999998
No 299
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=22.70 E-value=85 Score=28.64 Aligned_cols=40 Identities=20% Similarity=0.273 Sum_probs=29.4
Q ss_pred HHHHHHHHhcCCCeEEEEeChHHHHHHHHHHhCCCccCeE
Q 024392 153 QIVDFLKEIVKEPAVLVGNSLGGFAALVAAVGLPDQVTGV 192 (268)
Q Consensus 153 ~~~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~l 192 (268)
-+.+.+.+.+..+-++.|-|.|+.++..++...++++..+
T Consensus 84 GVlkaL~e~gllp~iI~GtSAGAivaalla~~t~~el~~~ 123 (407)
T cd07232 84 GVVKALLDADLLPNVISGTSGGSLVAALLCTRTDEELKQL 123 (407)
T ss_pred HHHHHHHhCCCCCCEEEEECHHHHHHHHHHcCCHHHHHHH
Confidence 3444455556667789999999999999998766655444
No 300
>PF08802 CytB6-F_Fe-S: Cytochrome B6-F complex Fe-S subunit ; InterPro: IPR014909 The cytochrome b6-f complex mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. The cytochrome b6-f complex has 4 large subunits, these are: cytochrome b6, subunit IV (17 kDa polypeptide, PetD), cytochrome f and the Rieske protein, while the 4 small subunits are: PetG, PetL, PetM and PetN. The complex functions as a dimer. This protein corresponds to the alpha helical transmembrane domain of the cytochrome b6-f complex Rieske iron-sulphur subunit. ; GO: 0009496 plastoquinol-plastocyanin reductase activity, 0051537 2 iron, 2 sulfur cluster binding, 0055114 oxidation-reduction process, 0042651 thylakoid membrane; PDB: 1Q90_R 1VF5_D 2E75_D 2E74_D 2E76_D 2D2C_Q 2ZT9_D.
Probab=22.62 E-value=1.5e+02 Score=17.24 Aligned_cols=9 Identities=33% Similarity=0.460 Sum_probs=5.6
Q ss_pred hhhHHHHHH
Q 024392 40 ISRRTFVFR 48 (268)
Q Consensus 40 m~rr~~~~~ 48 (268)
|+||.++-.
T Consensus 6 m~RR~lmN~ 14 (39)
T PF08802_consen 6 MSRRQLMNL 14 (39)
T ss_dssp HHHHHHHHH
T ss_pred hhHHHHHHH
Confidence 667776543
No 301
>TIGR00391 hydA hydrogenase (NiFe) small subunit (hydA). Called (hupA/hydA/hupS/hoxK/vhtG) Involved in hydrogenase reactions performing different specific functions in different species eg (EC 1.12.2.1) in Desulfovibrio gigas,(EC 1.12.99.3) in Wolinella succinogenes and (EC 1.18.99.1) in E.coli and a number of other species and (EC 1.12.99.-) in the archea.
Probab=22.36 E-value=1.5e+02 Score=26.70 Aligned_cols=18 Identities=22% Similarity=0.207 Sum_probs=11.6
Q ss_pred hhhhhHHHHHHHHHHHHH
Q 024392 38 CEISRRTFVFRGIVASGA 55 (268)
Q Consensus 38 ~~m~rr~~~~~~~~~~~~ 55 (268)
+.++||.|+..+..++++
T Consensus 13 ~g~sRR~FlK~~~~~~a~ 30 (365)
T TIGR00391 13 QGINRRDFLKLCAALATT 30 (365)
T ss_pred cCCCHHHHHHHHHHHHHH
Confidence 457789888766554443
No 302
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=22.17 E-value=4.4e+02 Score=23.06 Aligned_cols=67 Identities=18% Similarity=0.274 Sum_probs=39.4
Q ss_pred CcEEEECCCCCChhhHHHhHHHHHhc-CeEEEEcCCCC--------CCC-------CcccccCCHHHHHHHHHHHHHHhc
Q 024392 99 SPVVLIHGFGASAFHWRYNIPELAKR-YKVYAVDLLGF--------GWS-------EKAIIEYDAMVWKDQIVDFLKEIV 162 (268)
Q Consensus 99 ~~vv~lHG~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~--------G~s-------~~~~~~~~~~~~~~~~~~~l~~~~ 162 (268)
|.|+|.-|.++ ..+.+++. |.|+..|+--- |.. +....-.+.+.+.+.+.+.++..|
T Consensus 253 Pmi~fakG~g~-------~Le~l~~tG~DVvgLDWTvdp~ear~~~g~~VtlQGNlDP~~ly~s~e~it~~v~~mv~~fG 325 (359)
T KOG2872|consen 253 PMILFAKGSGG-------ALEELAQTGYDVVGLDWTVDPAEARRRVGNRVTLQGNLDPGVLYGSKEEITQLVKQMVKDFG 325 (359)
T ss_pred ceEEEEcCcch-------HHHHHHhcCCcEEeecccccHHHHHHhhCCceEEecCCChHHhcCCHHHHHHHHHHHHHHhC
Confidence 67888888653 34556666 99999997421 111 111111244555666777888888
Q ss_pred CCCeE-EEEeC
Q 024392 163 KEPAV-LVGNS 172 (268)
Q Consensus 163 ~~~~~-lvG~S 172 (268)
.++.+ =.||.
T Consensus 326 ~~ryI~NLGHG 336 (359)
T KOG2872|consen 326 KSRYIANLGHG 336 (359)
T ss_pred ccceEEecCCC
Confidence 66533 35664
No 303
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=22.01 E-value=5.8e+02 Score=22.83 Aligned_cols=37 Identities=22% Similarity=0.287 Sum_probs=22.1
Q ss_pred HhcCCCeEEEEeChHHHHHHHH-HHhCCCccCeEEEec
Q 024392 160 EIVKEPAVLVGNSLGGFAALVA-AVGLPDQVTGVALLN 196 (268)
Q Consensus 160 ~~~~~~~~lvG~S~Gg~~a~~~-a~~~p~~v~~lvl~~ 196 (268)
++..+.=.++|-|-|+.++..+ .++.|+.-..++.+-
T Consensus 299 ~La~eeGll~G~SSGan~~aAl~~a~~~en~~kliV~~ 336 (362)
T KOG1252|consen 299 RLALEEGLLVGISSGANVAAALKLAKRPENAGKLIVVT 336 (362)
T ss_pred HHHHhhCeeecccchHHHHHHHHHHhccccCCcEEEEE
Confidence 3334455899999998765432 234455555555544
No 304
>PRK14974 cell division protein FtsY; Provisional
Probab=21.98 E-value=5.6e+02 Score=22.69 Aligned_cols=64 Identities=20% Similarity=0.261 Sum_probs=42.1
Q ss_pred cCeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHHhcCCCeEEEEeChHHHHHHHHHHhCC--CccCeEEEe
Q 024392 124 RYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVKEPAVLVGNSLGGFAALVAAVGLP--DQVTGVALL 195 (268)
Q Consensus 124 ~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p--~~v~~lvl~ 195 (268)
++.++.+|-.|.... -....+.+..+.+....+.+++|.-+.-|.-+..-+..+. -.+.++|+.
T Consensus 222 ~~DvVLIDTaGr~~~--------~~~lm~eL~~i~~~~~pd~~iLVl~a~~g~d~~~~a~~f~~~~~~~giIlT 287 (336)
T PRK14974 222 GIDVVLIDTAGRMHT--------DANLMDELKKIVRVTKPDLVIFVGDALAGNDAVEQAREFNEAVGIDGVILT 287 (336)
T ss_pred CCCEEEEECCCccCC--------cHHHHHHHHHHHHhhCCceEEEeeccccchhHHHHHHHHHhcCCCCEEEEe
Confidence 389999999876432 2233456666666666777778877777776666665543 247787764
No 305
>KOG2214 consensus Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=21.68 E-value=1.7e+02 Score=27.50 Aligned_cols=42 Identities=19% Similarity=0.262 Sum_probs=29.6
Q ss_pred HHHHHHHHhcCCCeEEEEeChHHHHHHHHHHhCCCccCeEEE
Q 024392 153 QIVDFLKEIVKEPAVLVGNSLGGFAALVAAVGLPDQVTGVAL 194 (268)
Q Consensus 153 ~~~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl 194 (268)
-+...+-+.+.=+-++-|-|+|+.+|..++.+..+.++.+.-
T Consensus 191 GVlrtL~e~dLlP~IIsGsS~GaivAsl~~v~~~eEl~~Ll~ 232 (543)
T KOG2214|consen 191 GVLRTLLEQDLLPNIISGSSAGAIVASLVGVRSNEELKQLLT 232 (543)
T ss_pred HHHHHHHHccccchhhcCCchhHHHHHHHhhcchHHHHHHhc
Confidence 333333333444668999999999999999888777776653
No 306
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=21.52 E-value=2.7e+02 Score=26.81 Aligned_cols=43 Identities=19% Similarity=0.441 Sum_probs=30.5
Q ss_pred HHHHHHHHhcCCCeEEEEe------ChHHHHHHHHHHhCCCccCeEEEecCC
Q 024392 153 QIVDFLKEIVKEPAVLVGN------SLGGFAALVAAVGLPDQVTGVALLNSA 198 (268)
Q Consensus 153 ~~~~~l~~~~~~~~~lvG~------S~Gg~~a~~~a~~~p~~v~~lvl~~~~ 198 (268)
.+.+.+.+ .++++++|| +.|+.+++..-+..-++ ++.+.++|.
T Consensus 329 al~d~i~e--~d~VfImGHk~pDmDalGsAig~~~~A~~~~~-~a~~v~dp~ 377 (655)
T COG3887 329 ALSDIIKE--SDNVFIMGHKFPDMDALGSAIGMQKFASMNNK-EAFAVLDPE 377 (655)
T ss_pred HHHHHHhh--cCcEEEEccCCCChHHHHHHHHHHHHHHhccc-ccEEEECcc
Confidence 34444433 579999999 68999998766655444 778888874
No 307
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=21.30 E-value=48 Score=27.92 Aligned_cols=15 Identities=27% Similarity=0.470 Sum_probs=12.5
Q ss_pred cCCCeEEEEeChHHH
Q 024392 162 VKEPAVLVGNSLGGF 176 (268)
Q Consensus 162 ~~~~~~lvG~S~Gg~ 176 (268)
..+.|+++|||+|..
T Consensus 233 ~i~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 233 DIDEIIIYGHSLGEV 247 (270)
T ss_pred CCCEEEEEeCCCchh
Confidence 357899999999965
No 308
>PRK10081 entericidin B membrane lipoprotein; Provisional
Probab=21.26 E-value=1.4e+02 Score=18.28 Aligned_cols=8 Identities=0% Similarity=0.040 Sum_probs=4.2
Q ss_pred hhhhHHHH
Q 024392 39 EISRRTFV 46 (268)
Q Consensus 39 ~m~rr~~~ 46 (268)
||+|...+
T Consensus 1 MmKk~i~~ 8 (48)
T PRK10081 1 MVKKTIAA 8 (48)
T ss_pred ChHHHHHH
Confidence 35565544
No 309
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=21.03 E-value=3.6e+02 Score=26.08 Aligned_cols=42 Identities=21% Similarity=0.324 Sum_probs=26.6
Q ss_pred CCcEEEECCCCCCh---hhHHHhHHHHHhc---CeEEEEcCCCCCCCC
Q 024392 98 GSPVVLIHGFGASA---FHWRYNIPELAKR---YKVYAVDLLGFGWSE 139 (268)
Q Consensus 98 ~~~vv~lHG~~~~~---~~~~~~~~~l~~~---~~v~~~d~~G~G~s~ 139 (268)
..|++++||..... +.-..+...|.++ +..+.+.--||+-+.
T Consensus 551 ~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~ 598 (620)
T COG1506 551 KTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSR 598 (620)
T ss_pred CCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCC
Confidence 45899999987654 2344556667765 445555555666554
No 310
>COG0813 DeoD Purine-nucleoside phosphorylase [Nucleotide transport and metabolism]
Probab=20.69 E-value=2e+02 Score=23.95 Aligned_cols=38 Identities=11% Similarity=0.200 Sum_probs=24.9
Q ss_pred CCCeEEEEeChHH----HHHHHHHHhCCCccCeEEEecCCCCCC
Q 024392 163 KEPAVLVGNSLGG----FAALVAAVGLPDQVTGVALLNSAGQFG 202 (268)
Q Consensus 163 ~~~~~lvG~S~Gg----~~a~~~a~~~p~~v~~lvl~~~~~~~~ 202 (268)
.+++.++||.||= ..+.++...+ .|+.+|-+++.+.+.
T Consensus 55 Gk~iSvmg~GmGipS~sIY~~ELi~~y--~Vk~iIRvGt~Gal~ 96 (236)
T COG0813 55 GKKISVMGHGMGIPSISIYSRELITDY--GVKKIIRVGTCGALS 96 (236)
T ss_pred CcEEEEEEecCCCccHHHHHHHHHHHh--CcceEEEEEcccccc
Confidence 4688888888883 3344444444 478888777776544
No 311
>cd06292 PBP1_LacI_like_10 Ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. This group includes the ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type I periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor.
Probab=20.50 E-value=4.8e+02 Score=21.30 Aligned_cols=55 Identities=15% Similarity=0.007 Sum_probs=25.0
Q ss_pred hHHHHHhc-CeEEEEcCCCCCCCCcccccCCHHHHHHHHHHHHHHhcCCCeEEEEe
Q 024392 117 NIPELAKR-YKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVKEPAVLVGN 171 (268)
Q Consensus 117 ~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~lvG~ 171 (268)
.+..+.+. ..|+.+|....+....+.-..+.......+...+-..|.+++.+++.
T Consensus 75 ~i~~~~~~~ipvV~i~~~~~~~~~~~~V~~d~~~~~~~~~~~l~~~g~~~i~~i~~ 130 (273)
T cd06292 75 HYERLAERGLPVVLVNGRAPPPLKVPHVSTDDALAMRLAVRHLVALGHRRIGFASG 130 (273)
T ss_pred HHHHHHhCCCCEEEEcCCCCCCCCCCEEEECcHHHHHHHHHHHHHCCCceEEEEeC
Confidence 34444444 67777765322211112222233333444444444446666666654
No 312
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=20.41 E-value=1.8e+02 Score=24.36 Aligned_cols=33 Identities=24% Similarity=0.378 Sum_probs=23.9
Q ss_pred HHHHHHHhcCC--C--eEEEEeChHHHHHHHHHHhCC
Q 024392 154 IVDFLKEIVKE--P--AVLVGNSLGGFAALVAAVGLP 186 (268)
Q Consensus 154 ~~~~l~~~~~~--~--~~lvG~S~Gg~~a~~~a~~~p 186 (268)
+.+.+.+.++. + -.+.|-|.|+.++..++...+
T Consensus 17 Vl~~L~e~g~~l~~~~~~i~GtSAGAl~aa~~a~g~~ 53 (243)
T cd07204 17 VASALREHAPRLLQNARRIAGASAGAIVAAVVLCGVS 53 (243)
T ss_pred HHHHHHHcCcccccCCCEEEEEcHHHHHHHHHHhCCC
Confidence 44455555543 2 389999999999999998754
No 313
>TIGR02811 formate_TAT formate dehydrogenase region TAT target. Members of this uncharacterized protein family are all small, extending 70 or fewer residues from their respective likely start codons. All have the twin-arginine-dependent tranport (TAT) signal sequence at the N-terminus and a conserved 20-residue C-terminal region that includes the motif Y-[HRK]-X-[TS]-X-H-[IV]-X-X-[YF]-Y. The TAT signal sequence suggests a bound cofactor. All members are encoded near genes for subunits of formate dehydrogenase, and may themselves be a subunit or accessory protein.
Probab=20.31 E-value=2e+02 Score=18.81 Aligned_cols=9 Identities=33% Similarity=0.316 Sum_probs=6.1
Q ss_pred hhhHHHHHH
Q 024392 40 ISRRTFVFR 48 (268)
Q Consensus 40 m~rr~~~~~ 48 (268)
.+||.|+..
T Consensus 9 ~sRR~Flk~ 17 (66)
T TIGR02811 9 PSRRDLLKG 17 (66)
T ss_pred ccHHHHHHH
Confidence 467887764
No 314
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=20.20 E-value=1.4e+02 Score=26.04 Aligned_cols=32 Identities=28% Similarity=0.289 Sum_probs=23.2
Q ss_pred HHHHHHHhcCCCeEEEEeChHHHHHHHHHHhC
Q 024392 154 IVDFLKEIVKEPAVLVGNSLGGFAALVAAVGL 185 (268)
Q Consensus 154 ~~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~ 185 (268)
+.+.+.+.+..+-++.|-|.|+.++..++...
T Consensus 87 vl~aL~e~~l~~~~i~GtSaGAi~aa~~~~~~ 118 (298)
T cd07206 87 VVKALWEQDLLPRVISGSSAGAIVAALLGTHT 118 (298)
T ss_pred HHHHHHHcCCCCCEEEEEcHHHHHHHHHHcCC
Confidence 33444444556668999999999999988653
Done!