Query 024393
Match_columns 268
No_of_seqs 124 out of 1234
Neff 10.0
Searched_HMMs 29240
Date Mon Mar 25 07:29:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024393.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024393hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2z3y_A Lysine-specific histone 100.0 2.8E-34 9.5E-39 263.7 25.7 237 1-240 396-659 (662)
2 2xag_A Lysine-specific histone 100.0 8.5E-34 2.9E-38 264.2 23.4 238 1-241 567-831 (852)
3 1s3e_A Amine oxidase [flavin-c 100.0 8.4E-33 2.9E-37 247.9 23.1 238 1-240 210-455 (520)
4 4gut_A Lysine-specific histone 100.0 1.5E-32 5.1E-37 254.3 25.1 237 1-237 529-775 (776)
5 1b37_A Protein (polyamine oxid 100.0 1.1E-31 3.7E-36 238.0 27.5 240 2-242 202-461 (472)
6 2yg5_A Putrescine oxidase; oxi 100.0 1.1E-32 3.9E-37 243.0 19.9 236 1-239 210-451 (453)
7 2iid_A L-amino-acid oxidase; f 100.0 1.9E-31 6.6E-36 237.9 19.8 238 1-241 236-486 (498)
8 2vvm_A Monoamine oxidase N; FA 100.0 3E-30 1E-34 230.1 21.3 231 2-241 251-487 (495)
9 1rsg_A FMS1 protein; FAD bindi 100.0 4.1E-29 1.4E-33 223.8 27.4 238 5-242 201-510 (516)
10 2jae_A L-amino acid oxidase; o 100.0 4.1E-30 1.4E-34 228.8 18.7 236 1-241 234-487 (489)
11 3qj4_A Renalase; FAD/NAD(P)-bi 100.0 2.4E-27 8.3E-32 201.7 21.2 224 2-238 108-341 (342)
12 3k7m_X 6-hydroxy-L-nicotine ox 100.0 2.7E-27 9.2E-32 207.3 21.8 222 2-238 203-425 (431)
13 3ayj_A Pro-enzyme of L-phenyla 99.9 5E-27 1.7E-31 213.8 14.4 239 1-241 342-681 (721)
14 3i6d_A Protoporphyrinogen oxid 99.9 1.3E-25 4.5E-30 198.5 18.2 223 2-239 231-468 (470)
15 2ivd_A PPO, PPOX, protoporphyr 99.9 1.7E-24 5.8E-29 192.0 17.0 227 1-241 233-475 (478)
16 3lov_A Protoporphyrinogen oxid 99.9 1.4E-24 4.6E-29 192.5 15.1 220 2-239 232-465 (475)
17 1sez_A Protoporphyrinogen oxid 99.9 2.4E-23 8.4E-28 185.7 15.2 228 1-240 238-494 (504)
18 3nks_A Protoporphyrinogen oxid 99.9 2.6E-22 8.8E-27 177.9 16.0 221 2-237 230-472 (477)
19 3ka7_A Oxidoreductase; structu 99.9 3.3E-21 1.1E-25 168.3 18.6 218 2-236 192-424 (425)
20 4dgk_A Phytoene dehydrogenase; 99.9 1.5E-21 5E-26 174.1 11.3 237 1-241 216-493 (501)
21 1yvv_A Amine oxidase, flavin-c 99.8 1E-18 3.5E-23 147.7 22.7 216 2-239 106-327 (336)
22 3nrn_A Uncharacterized protein 99.8 9.8E-18 3.3E-22 146.2 18.6 209 2-235 185-403 (421)
23 2e1m_C L-glutamate oxidase; L- 99.8 1E-18 3.5E-23 134.5 8.1 115 123-239 33-152 (181)
24 4dsg_A UDP-galactopyranose mut 99.8 5E-18 1.7E-22 150.6 13.6 222 2-236 212-452 (484)
25 4gde_A UDP-galactopyranose mut 99.7 2.3E-17 8E-22 147.2 11.2 220 2-237 218-477 (513)
26 2b9w_A Putative aminooxidase; 99.7 8.7E-16 3E-20 133.9 15.0 215 1-236 201-423 (424)
27 2e1m_B L-glutamate oxidase; L- 99.3 7.5E-14 2.6E-18 100.3 -2.2 107 42-163 4-111 (130)
28 1v0j_A UDP-galactopyranose mut 98.8 5.6E-10 1.9E-14 96.5 1.0 72 1-96 200-274 (399)
29 1i8t_A UDP-galactopyranose mut 98.6 1.5E-08 5.3E-13 86.4 3.8 71 1-96 190-260 (367)
30 2bi7_A UDP-galactopyranose mut 98.5 3.2E-07 1.1E-11 78.7 8.1 64 1-93 194-260 (384)
31 2bcg_G Secretory pathway GDP d 98.3 6.2E-06 2.1E-10 72.3 12.8 54 2-56 238-299 (453)
32 3kkj_A Amine oxidase, flavin-c 98.1 0.00037 1.3E-08 55.5 18.6 91 137-241 238-329 (336)
33 1d5t_A Guanine nucleotide diss 97.7 3.7E-05 1.3E-09 66.9 5.8 56 2-57 230-290 (433)
34 3p1w_A Rabgdi protein; GDI RAB 97.7 6.1E-05 2.1E-09 66.0 6.3 56 1-56 251-313 (475)
35 3hdq_A UDP-galactopyranose mut 97.6 0.00022 7.5E-09 61.2 8.6 69 2-97 219-289 (397)
36 1vg0_A RAB proteins geranylger 97.4 0.00023 7.8E-09 64.6 6.7 81 1-97 373-461 (650)
37 3ihg_A RDME; flavoenzyme, anth 97.1 0.0048 1.6E-07 55.0 11.6 43 15-57 134-183 (535)
38 2e1m_A L-glutamate oxidase; L- 96.5 0.0014 4.8E-08 55.7 3.2 55 1-55 315-371 (376)
39 3nix_A Flavoprotein/dehydrogen 96.4 0.079 2.7E-06 45.2 13.7 43 15-57 120-166 (421)
40 2qa1_A PGAE, polyketide oxygen 96.3 0.35 1.2E-05 42.6 17.7 43 15-57 120-165 (500)
41 3cgv_A Geranylgeranyl reductas 96.3 0.091 3.1E-06 44.3 13.4 43 15-57 116-162 (397)
42 3atr_A Conserved archaeal prot 96.1 0.072 2.5E-06 46.2 12.2 43 15-57 114-162 (453)
43 3i3l_A Alkylhalidase CMLS; fla 96.0 0.079 2.7E-06 47.8 12.2 43 15-57 142-188 (591)
44 3dje_A Fructosyl amine: oxygen 96.0 0.014 5E-07 50.3 7.2 43 15-57 175-221 (438)
45 3oz2_A Digeranylgeranylglycero 95.9 0.082 2.8E-06 44.4 11.1 38 204-241 277-317 (397)
46 3fmw_A Oxygenase; mithramycin, 95.8 0.3 1E-05 43.8 14.7 43 15-57 162-207 (570)
47 3e1t_A Halogenase; flavoprotei 95.7 0.066 2.2E-06 47.3 10.3 43 15-57 125-172 (512)
48 3nyc_A D-arginine dehydrogenas 95.7 0.016 5.4E-07 48.8 6.0 42 15-57 168-209 (381)
49 3ps9_A TRNA 5-methylaminomethy 95.7 0.022 7.6E-07 52.2 7.3 43 15-57 431-473 (676)
50 3pvc_A TRNA 5-methylaminomethy 95.4 0.03 1E-06 51.5 7.0 43 15-57 426-469 (689)
51 3dme_A Conserved exported prot 95.3 0.04 1.4E-06 45.9 7.2 43 15-57 164-209 (369)
52 3rp8_A Flavoprotein monooxygen 95.1 0.041 1.4E-06 46.9 6.7 42 16-57 140-181 (407)
53 2x3n_A Probable FAD-dependent 94.9 0.041 1.4E-06 46.8 6.1 50 8-57 113-166 (399)
54 3v76_A Flavoprotein; structura 94.9 0.052 1.8E-06 46.7 6.7 50 6-56 132-186 (417)
55 2uzz_A N-methyl-L-tryptophan o 94.8 0.063 2.2E-06 45.0 6.9 42 15-57 163-204 (372)
56 2v3a_A Rubredoxin reductase; a 94.7 0.089 3E-06 44.5 7.5 48 8-55 193-241 (384)
57 2ywl_A Thioredoxin reductase r 94.6 0.068 2.3E-06 39.8 6.0 39 15-55 70-108 (180)
58 2i0z_A NAD(FAD)-utilizing dehy 94.6 0.068 2.3E-06 46.3 6.7 51 6-56 134-190 (447)
59 1y56_B Sarcosine oxidase; dehy 94.6 0.074 2.5E-06 44.8 6.7 41 15-56 163-204 (382)
60 3o0h_A Glutathione reductase; 94.5 0.085 2.9E-06 46.2 7.2 42 15-56 246-287 (484)
61 2oln_A NIKD protein; flavoprot 94.5 0.082 2.8E-06 44.8 6.9 41 15-56 167-207 (397)
62 1ryi_A Glycine oxidase; flavop 94.4 0.058 2E-06 45.4 5.7 181 15-237 178-361 (382)
63 3iwa_A FAD-dependent pyridine 94.4 0.097 3.3E-06 45.7 7.2 41 15-55 216-256 (472)
64 2vou_A 2,6-dihydroxypyridine h 94.3 0.11 3.9E-06 44.0 7.4 51 7-57 100-153 (397)
65 2xdo_A TETX2 protein; tetracyc 94.3 0.093 3.2E-06 44.6 6.8 51 7-57 129-182 (398)
66 1xdi_A RV3303C-LPDA; reductase 94.2 0.099 3.4E-06 46.0 7.0 42 15-56 237-278 (499)
67 2gf3_A MSOX, monomeric sarcosi 94.1 0.098 3.4E-06 44.1 6.6 42 15-57 164-205 (389)
68 3lxd_A FAD-dependent pyridine 94.1 0.13 4.4E-06 44.0 7.3 41 15-55 208-249 (415)
69 3nlc_A Uncharacterized protein 94.0 0.11 3.7E-06 46.4 6.8 42 15-56 234-276 (549)
70 3fg2_P Putative rubredoxin red 93.9 0.13 4.6E-06 43.8 7.1 41 15-55 198-239 (404)
71 2yqu_A 2-oxoglutarate dehydrog 93.9 0.13 4.6E-06 44.5 7.2 42 15-56 222-263 (455)
72 1m6i_A Programmed cell death p 93.7 0.17 5.8E-06 44.5 7.4 42 15-56 240-281 (493)
73 3ef6_A Toluene 1,2-dioxygenase 93.4 0.16 5.5E-06 43.4 6.7 42 15-56 199-240 (410)
74 2gqf_A Hypothetical protein HI 93.2 0.19 6.6E-06 42.9 6.8 41 15-56 123-167 (401)
75 2r9z_A Glutathione amide reduc 93.0 0.22 7.7E-06 43.3 7.1 48 9-56 214-263 (463)
76 4hb9_A Similarities with proba 93.0 0.28 9.5E-06 41.4 7.5 51 7-57 113-166 (412)
77 3oc4_A Oxidoreductase, pyridin 93.0 0.23 8E-06 43.0 7.1 48 8-56 195-243 (452)
78 2zbw_A Thioredoxin reductase; 93.0 0.26 8.8E-06 40.5 7.1 42 15-56 79-120 (335)
79 3ic9_A Dihydrolipoamide dehydr 92.8 0.24 8.3E-06 43.5 7.1 49 8-56 221-273 (492)
80 1ges_A Glutathione reductase; 92.8 0.28 9.4E-06 42.5 7.4 47 9-55 215-263 (450)
81 1mo9_A ORF3; nucleotide bindin 92.8 0.18 6.1E-06 44.7 6.2 48 8-55 261-314 (523)
82 2wpf_A Trypanothione reductase 92.8 0.29 9.8E-06 43.0 7.4 48 8-55 241-290 (495)
83 2hqm_A GR, grase, glutathione 92.5 0.3 1E-05 42.6 7.2 47 9-55 233-283 (479)
84 1fec_A Trypanothione reductase 92.4 0.27 9.1E-06 43.2 6.8 42 15-56 245-287 (490)
85 2gag_B Heterotetrameric sarcos 92.3 0.25 8.6E-06 41.7 6.4 41 15-56 188-229 (405)
86 2cdu_A NADPH oxidase; flavoenz 92.3 0.36 1.2E-05 41.7 7.4 42 15-56 205-246 (452)
87 1w4x_A Phenylacetone monooxyge 92.1 0.25 8.6E-06 43.9 6.3 40 16-55 111-152 (542)
88 2qa2_A CABE, polyketide oxygen 92.1 0.3 1E-05 43.0 6.7 43 15-57 121-166 (499)
89 1q1r_A Putidaredoxin reductase 92.0 0.4 1.4E-05 41.3 7.3 41 15-55 205-248 (431)
90 2cul_A Glucose-inhibited divis 91.8 0.3 1E-05 38.1 5.8 41 15-56 83-124 (232)
91 4a9w_A Monooxygenase; baeyer-v 91.8 0.19 6.6E-06 41.5 4.9 41 15-56 90-131 (357)
92 3s5w_A L-ornithine 5-monooxyge 91.8 0.35 1.2E-05 41.9 6.7 42 15-56 330-376 (463)
93 2qae_A Lipoamide, dihydrolipoy 91.7 0.4 1.4E-05 41.7 7.0 50 7-56 220-275 (468)
94 2gv8_A Monooxygenase; FMO, FAD 91.5 0.34 1.2E-05 41.8 6.3 41 16-56 130-176 (447)
95 4ap3_A Steroid monooxygenase; 91.4 0.33 1.1E-05 43.3 6.2 39 17-55 117-157 (549)
96 3ab1_A Ferredoxin--NADP reduct 91.3 0.51 1.7E-05 39.2 7.1 60 199-258 286-346 (360)
97 1onf_A GR, grase, glutathione 91.3 0.5 1.7E-05 41.5 7.3 48 9-56 224-274 (500)
98 2eq6_A Pyruvate dehydrogenase 91.3 0.44 1.5E-05 41.4 6.8 41 15-55 224-269 (464)
99 4dna_A Probable glutathione re 91.3 0.41 1.4E-05 41.5 6.6 47 8-55 217-266 (463)
100 3axb_A Putative oxidoreductase 91.2 0.33 1.1E-05 41.8 5.9 41 15-56 195-253 (448)
101 3ntd_A FAD-dependent pyridine 91.1 0.57 2E-05 41.7 7.5 42 14-55 205-265 (565)
102 3gwf_A Cyclohexanone monooxyge 90.8 0.42 1.4E-05 42.6 6.3 39 17-55 105-145 (540)
103 3lad_A Dihydrolipoamide dehydr 90.8 0.51 1.7E-05 41.1 6.7 42 15-56 235-279 (476)
104 1y56_A Hypothetical protein PH 90.6 0.57 1.9E-05 41.1 6.9 53 4-56 259-312 (493)
105 1pj5_A N,N-dimethylglycine oxi 90.3 0.48 1.7E-05 44.5 6.6 42 15-57 165-207 (830)
106 4at0_A 3-ketosteroid-delta4-5a 90.3 0.49 1.7E-05 41.7 6.3 51 6-56 202-263 (510)
107 2a8x_A Dihydrolipoyl dehydroge 90.2 0.66 2.3E-05 40.2 7.0 42 15-56 226-270 (464)
108 1ojt_A Surface protein; redox- 90.2 0.38 1.3E-05 42.0 5.4 42 15-56 240-285 (482)
109 3f8d_A Thioredoxin reductase ( 90.1 0.77 2.6E-05 37.2 7.0 41 15-56 84-124 (323)
110 3fpz_A Thiazole biosynthetic e 89.8 0.22 7.7E-06 41.0 3.4 41 200-240 280-325 (326)
111 4b1b_A TRXR, thioredoxin reduc 89.7 0.79 2.7E-05 40.8 7.1 40 15-54 277-316 (542)
112 3d1c_A Flavin-containing putat 89.7 0.39 1.3E-05 39.9 5.0 41 15-56 102-142 (369)
113 3vrd_B FCCB subunit, flavocyto 89.6 0.31 1.1E-05 41.3 4.3 40 16-55 217-256 (401)
114 2e4g_A Tryptophan halogenase; 89.5 0.92 3.1E-05 40.4 7.5 42 15-57 209-252 (550)
115 1qo8_A Flavocytochrome C3 fuma 89.5 0.73 2.5E-05 41.1 6.8 42 15-56 264-311 (566)
116 1k0i_A P-hydroxybenzoate hydro 89.5 0.66 2.3E-05 39.1 6.3 43 15-57 117-163 (394)
117 1y0p_A Fumarate reductase flav 89.5 0.74 2.5E-05 41.2 6.9 41 15-55 269-315 (571)
118 1ebd_A E3BD, dihydrolipoamide 89.5 0.6 2E-05 40.4 6.1 42 15-56 225-269 (455)
119 3uox_A Otemo; baeyer-villiger 89.3 0.56 1.9E-05 41.8 5.9 39 17-55 105-145 (545)
120 1zk7_A HGII, reductase, mercur 89.3 0.83 2.8E-05 39.6 6.9 41 15-56 230-270 (467)
121 3itj_A Thioredoxin reductase 1 89.3 0.56 1.9E-05 38.3 5.5 50 6-55 212-269 (338)
122 3c96_A Flavin-containing monoo 89.2 0.57 1.9E-05 39.8 5.7 50 7-57 112-169 (410)
123 2gqw_A Ferredoxin reductase; f 89.1 0.87 3E-05 38.8 6.8 38 15-56 201-238 (408)
124 3lzw_A Ferredoxin--NADP reduct 89.1 0.75 2.6E-05 37.4 6.2 40 15-55 81-121 (332)
125 1zmd_A Dihydrolipoyl dehydroge 89.1 0.79 2.7E-05 39.8 6.6 42 15-56 234-281 (474)
126 2q0l_A TRXR, thioredoxin reduc 89.1 0.99 3.4E-05 36.5 6.8 40 15-55 73-112 (311)
127 3klj_A NAD(FAD)-dependent dehy 88.8 0.51 1.7E-05 40.0 5.0 39 15-55 76-114 (385)
128 1trb_A Thioredoxin reductase; 88.8 1.1 3.6E-05 36.4 6.9 43 14-56 197-246 (320)
129 3l8k_A Dihydrolipoyl dehydroge 88.6 0.78 2.7E-05 39.8 6.2 41 16-56 226-271 (466)
130 3alj_A 2-methyl-3-hydroxypyrid 88.6 0.83 2.8E-05 38.3 6.2 40 15-57 121-160 (379)
131 2zxi_A TRNA uridine 5-carboxym 88.5 0.86 2.9E-05 41.3 6.5 41 15-56 138-179 (637)
132 1dxl_A Dihydrolipoamide dehydr 88.5 0.78 2.7E-05 39.8 6.1 49 8-56 224-278 (470)
133 2r0c_A REBC; flavin adenine di 88.5 0.72 2.5E-05 41.1 6.0 40 18-57 152-196 (549)
134 1d4d_A Flavocytochrome C fumar 88.4 0.95 3.3E-05 40.5 6.8 41 15-55 269-315 (572)
135 4gcm_A TRXR, thioredoxin reduc 88.3 0.65 2.2E-05 37.7 5.3 44 198-242 265-308 (312)
136 3c4n_A Uncharacterized protein 88.3 0.23 8E-06 42.3 2.6 41 15-56 186-235 (405)
137 3r9u_A Thioredoxin reductase; 88.3 0.55 1.9E-05 37.9 4.8 44 198-242 271-314 (315)
138 1rp0_A ARA6, thiazole biosynth 88.3 0.95 3.3E-05 36.4 6.1 50 7-56 124-190 (284)
139 3urh_A Dihydrolipoyl dehydroge 88.2 0.94 3.2E-05 39.6 6.5 49 8-56 245-299 (491)
140 3fbs_A Oxidoreductase; structu 88.1 1.2 4.2E-05 35.5 6.7 36 21-56 76-111 (297)
141 2qcu_A Aerobic glycerol-3-phos 87.9 1.2 4E-05 39.2 6.9 43 15-57 163-210 (501)
142 2weu_A Tryptophan 5-halogenase 87.8 1.4 4.8E-05 38.6 7.4 42 15-57 187-230 (511)
143 1v59_A Dihydrolipoamide dehydr 87.7 0.85 2.9E-05 39.7 5.9 42 15-56 238-286 (478)
144 3itj_A Thioredoxin reductase 1 87.6 0.47 1.6E-05 38.8 4.0 40 15-55 98-140 (338)
145 3h8l_A NADH oxidase; membrane 87.6 0.76 2.6E-05 39.0 5.4 37 15-55 232-268 (409)
146 1fl2_A Alkyl hydroperoxide red 87.5 1.1 3.8E-05 36.1 6.2 42 15-56 70-114 (310)
147 2zbw_A Thioredoxin reductase; 86.9 1.6 5.6E-05 35.6 6.9 42 15-56 205-251 (335)
148 3kd9_A Coenzyme A disulfide re 86.9 1 3.4E-05 38.9 5.8 48 7-55 195-242 (449)
149 2xve_A Flavin-containing monoo 86.7 1.3 4.5E-05 38.4 6.5 42 15-56 115-165 (464)
150 3f8d_A Thioredoxin reductase ( 86.6 0.82 2.8E-05 37.0 4.9 44 200-243 276-320 (323)
151 3ces_A MNMG, tRNA uridine 5-ca 86.5 1.2 4.1E-05 40.5 6.1 41 15-56 139-180 (651)
152 3dgh_A TRXR-1, thioredoxin red 86.4 1.6 5.4E-05 38.0 6.9 48 8-55 233-287 (483)
153 3ab1_A Ferredoxin--NADP reduct 86.4 0.45 1.5E-05 39.6 3.3 42 15-56 88-130 (360)
154 3fbs_A Oxidoreductase; structu 86.0 0.88 3E-05 36.3 4.7 40 200-241 254-293 (297)
155 1vdc_A NTR, NADPH dependent th 85.9 1.2 4E-05 36.4 5.5 40 15-56 84-123 (333)
156 4a5l_A Thioredoxin reductase; 85.8 0.9 3.1E-05 36.7 4.7 43 198-241 271-313 (314)
157 2q0l_A TRXR, thioredoxin reduc 85.8 1.6 5.6E-05 35.1 6.3 49 7-55 183-239 (311)
158 1fl2_A Alkyl hydroperoxide red 85.7 0.98 3.3E-05 36.5 4.9 43 199-242 265-307 (310)
159 3s5w_A L-ornithine 5-monooxyge 85.6 1.5 5.2E-05 37.8 6.3 40 16-55 142-190 (463)
160 3ics_A Coenzyme A-disulfide re 85.5 1.4 4.9E-05 39.4 6.3 39 15-55 242-280 (588)
161 4fk1_A Putative thioredoxin re 85.1 0.7 2.4E-05 37.4 3.7 44 198-242 259-302 (304)
162 3cp8_A TRNA uridine 5-carboxym 85.0 1.5 5E-05 39.9 6.0 41 15-56 132-173 (641)
163 3cty_A Thioredoxin reductase; 84.9 0.83 2.8E-05 37.2 4.1 42 199-241 276-317 (319)
164 3da1_A Glycerol-3-phosphate de 84.8 1.5 5E-05 39.2 5.9 43 15-57 184-232 (561)
165 3d1c_A Flavin-containing putat 84.7 1.3 4.4E-05 36.7 5.3 49 7-55 219-270 (369)
166 3lzw_A Ferredoxin--NADP reduct 84.7 1.7 5.8E-05 35.3 5.9 47 9-55 196-248 (332)
167 2q7v_A Thioredoxin reductase; 84.6 2.1 7.3E-05 34.7 6.5 50 6-55 191-247 (325)
168 2pyx_A Tryptophan halogenase; 84.5 2.1 7.3E-05 37.7 6.8 42 15-57 190-233 (526)
169 2bc0_A NADH oxidase; flavoprot 84.5 1.6 5.6E-05 38.1 6.0 46 8-55 242-289 (490)
170 2cul_A Glucose-inhibited divis 84.4 0.71 2.4E-05 35.9 3.3 36 201-239 196-231 (232)
171 3r9u_A Thioredoxin reductase; 84.1 1.4 4.9E-05 35.4 5.2 49 8-56 188-243 (315)
172 2q7v_A Thioredoxin reductase; 83.9 1.3 4.6E-05 36.0 4.9 43 199-242 272-314 (325)
173 3dk9_A Grase, GR, glutathione 83.7 2.2 7.6E-05 37.0 6.5 49 8-56 234-292 (478)
174 3cty_A Thioredoxin reductase; 83.4 2.6 8.8E-05 34.1 6.5 48 8-55 196-250 (319)
175 1vdc_A NTR, NADPH dependent th 83.2 1.5 5E-05 35.8 4.9 42 200-242 284-325 (333)
176 1trb_A Thioredoxin reductase; 82.5 1.3 4.4E-05 35.9 4.3 41 200-241 275-315 (320)
177 2a87_A TRXR, TR, thioredoxin r 82.4 2 6.7E-05 35.2 5.4 43 200-243 277-319 (335)
178 2vdc_G Glutamate synthase [NAD 82.3 1.6 5.5E-05 37.8 5.0 42 199-242 405-446 (456)
179 2aqj_A Tryptophan halogenase, 82.3 3 0.0001 36.8 6.9 42 15-57 179-222 (538)
180 4a9w_A Monooxygenase; baeyer-v 81.9 1 3.5E-05 36.9 3.6 42 199-241 310-353 (357)
181 1hyu_A AHPF, alkyl hydroperoxi 81.9 2.5 8.6E-05 37.2 6.2 43 199-242 476-518 (521)
182 3nlc_A Uncharacterized protein 81.7 1.1 3.7E-05 40.0 3.7 39 202-242 507-545 (549)
183 1nhp_A NADH peroxidase; oxidor 81.3 2.3 8E-05 36.5 5.7 40 15-56 205-245 (447)
184 2a87_A TRXR, TR, thioredoxin r 80.8 3 0.0001 34.1 6.0 39 15-55 85-124 (335)
185 2gmh_A Electron transfer flavo 80.4 4.1 0.00014 36.5 7.1 37 204-240 347-386 (584)
186 1lvl_A Dihydrolipoamide dehydr 80.3 1.6 5.5E-05 37.7 4.3 40 15-56 226-267 (458)
187 3cgb_A Pyridine nucleotide-dis 80.1 4.4 0.00015 35.2 7.1 40 15-56 241-281 (480)
188 2wdq_A Succinate dehydrogenase 80.1 3.8 0.00013 36.7 6.8 42 15-56 157-205 (588)
189 2ywl_A Thioredoxin reductase r 79.8 2.3 8E-05 31.2 4.6 42 199-241 131-172 (180)
190 2bry_A NEDD9 interacting prote 79.7 1.5 5.1E-05 38.5 3.9 43 15-57 180-230 (497)
191 3dgz_A Thioredoxin reductase 2 79.6 3.9 0.00013 35.6 6.6 47 9-55 232-285 (488)
192 2h88_A Succinate dehydrogenase 79.0 4.1 0.00014 36.8 6.7 51 7-57 156-217 (621)
193 2rgh_A Alpha-glycerophosphate 78.5 4 0.00014 36.4 6.4 43 15-57 202-250 (571)
194 2bs2_A Quinol-fumarate reducta 78.3 4.8 0.00016 36.7 6.9 42 15-56 172-219 (660)
195 1n4w_A CHOD, cholesterol oxida 77.2 3.9 0.00013 35.9 5.8 47 11-57 231-288 (504)
196 3cgb_A Pyridine nucleotide-dis 77.2 3 0.0001 36.3 5.1 41 15-55 107-150 (480)
197 2dkh_A 3-hydroxybenzoate hydro 76.9 4.2 0.00015 36.8 6.2 50 8-57 147-211 (639)
198 2i0z_A NAD(FAD)-utilizing dehy 76.7 2.1 7.1E-05 36.9 3.9 42 200-241 401-445 (447)
199 4g6h_A Rotenone-insensitive NA 76.4 2.4 8.1E-05 37.3 4.2 41 15-55 286-330 (502)
200 3hyw_A Sulfide-quinone reducta 75.5 5.2 0.00018 34.2 6.1 39 15-55 214-254 (430)
201 3ef6_A Toluene 1,2-dioxygenase 75.5 3.7 0.00013 34.8 5.1 40 15-56 71-110 (410)
202 3h28_A Sulfide-quinone reducta 75.5 2.8 9.6E-05 35.8 4.4 46 8-55 206-254 (430)
203 4eqs_A Coenzyme A disulfide re 75.1 4.6 0.00016 34.6 5.7 45 7-55 193-238 (437)
204 1q1r_A Putidaredoxin reductase 75.1 3.1 0.0001 35.6 4.5 39 15-55 74-112 (431)
205 1coy_A Cholesterol oxidase; ox 75.1 4.5 0.00016 35.5 5.7 47 11-57 236-293 (507)
206 1hyu_A AHPF, alkyl hydroperoxi 74.5 4 0.00014 35.9 5.2 42 15-56 281-325 (521)
207 2gqw_A Ferredoxin reductase; f 73.5 4.5 0.00015 34.3 5.1 39 15-55 73-111 (408)
208 1m6i_A Programmed cell death p 73.4 2.7 9.3E-05 36.7 3.8 39 15-55 104-142 (493)
209 1kf6_A Fumarate reductase flav 72.6 6 0.00021 35.6 6.0 41 16-56 150-196 (602)
210 3ntd_A FAD-dependent pyridine 72.0 3.7 0.00013 36.4 4.4 41 15-55 72-115 (565)
211 1chu_A Protein (L-aspartate ox 71.9 4.6 0.00016 35.8 4.9 42 15-56 153-207 (540)
212 2bc0_A NADH oxidase; flavoprot 71.8 2.7 9.1E-05 36.7 3.4 41 15-55 106-147 (490)
213 3hyw_A Sulfide-quinone reducta 71.3 4.6 0.00016 34.5 4.7 38 16-56 71-108 (430)
214 1xhc_A NADH oxidase /nitrite r 71.0 3.6 0.00012 34.3 3.9 38 15-55 74-111 (367)
215 3k30_A Histamine dehydrogenase 70.3 2.9 9.8E-05 38.3 3.4 47 7-55 572-622 (690)
216 3iwa_A FAD-dependent pyridine 70.2 5.4 0.00019 34.4 5.0 41 15-55 80-123 (472)
217 1nhp_A NADH peroxidase; oxidor 70.1 5.9 0.0002 33.9 5.2 41 15-55 70-113 (447)
218 1jnr_A Adenylylsulfate reducta 69.4 11 0.00036 34.3 6.9 50 7-56 156-217 (643)
219 4b63_A L-ornithine N5 monooxyg 69.4 9.2 0.00032 33.4 6.3 38 17-54 161-211 (501)
220 3ics_A Coenzyme A-disulfide re 68.9 5.9 0.0002 35.3 5.1 41 15-55 107-150 (588)
221 4fk1_A Putative thioredoxin re 68.9 9.6 0.00033 30.5 6.0 38 18-55 77-115 (304)
222 1xhc_A NADH oxidase /nitrite r 67.8 5 0.00017 33.5 4.1 36 15-55 197-232 (367)
223 1kdg_A CDH, cellobiose dehydro 67.7 8.8 0.0003 33.9 5.9 49 8-56 201-260 (546)
224 3oc4_A Oxidoreductase, pyridin 65.9 3.7 0.00013 35.3 3.0 41 15-55 72-113 (452)
225 3h8l_A NADH oxidase; membrane 65.9 6.2 0.00021 33.3 4.4 38 202-239 298-335 (409)
226 3vrd_B FCCB subunit, flavocyto 65.7 7.5 0.00026 32.6 4.9 43 201-243 284-327 (401)
227 3h28_A Sulfide-quinone reducta 65.1 6.1 0.00021 33.7 4.2 45 198-242 280-335 (430)
228 2cdu_A NADPH oxidase; flavoenz 64.7 6.9 0.00023 33.6 4.5 41 15-55 72-115 (452)
229 1ps9_A 2,4-dienoyl-COA reducta 64.5 9.7 0.00033 34.7 5.6 44 10-56 581-627 (671)
230 2gjc_A Thiazole biosynthetic e 63.9 5.9 0.0002 32.6 3.7 38 203-240 283-325 (326)
231 2e5v_A L-aspartate oxidase; ar 63.8 9.9 0.00034 32.9 5.3 42 15-57 133-176 (472)
232 3lxd_A FAD-dependent pyridine 63.8 6.9 0.00024 33.1 4.3 39 15-55 79-117 (415)
233 4a5l_A Thioredoxin reductase; 62.2 21 0.00072 28.4 6.8 38 19-56 83-120 (314)
234 3sx6_A Sulfide-quinone reducta 61.3 9.2 0.00031 32.6 4.6 43 10-54 216-266 (437)
235 1gte_A Dihydropyrimidine dehyd 60.9 13 0.00046 35.7 6.1 44 199-244 469-512 (1025)
236 4eqs_A Coenzyme A disulfide re 59.3 12 0.00042 31.9 5.1 42 15-56 71-115 (437)
237 3sx6_A Sulfide-quinone reducta 58.7 7 0.00024 33.4 3.4 44 199-242 292-346 (437)
238 2jbv_A Choline oxidase; alcoho 57.9 13 0.00043 33.0 5.0 41 15-55 223-271 (546)
239 2gqf_A Hypothetical protein HI 57.7 6.5 0.00022 33.3 3.0 36 201-236 361-399 (401)
240 3gyx_A Adenylylsulfate reducta 57.2 16 0.00056 33.2 5.7 49 7-55 171-231 (662)
241 3ic9_A Dihydrolipoamide dehydr 56.5 10 0.00036 32.9 4.2 38 198-237 300-337 (492)
242 3l8k_A Dihydrolipoyl dehydroge 56.3 10 0.00035 32.7 4.1 38 198-237 295-332 (466)
243 1y56_A Hypothetical protein PH 56.0 7.5 0.00026 33.9 3.2 41 15-55 174-217 (493)
244 3qfa_A Thioredoxin reductase 1 55.7 26 0.00088 30.7 6.6 48 9-56 257-314 (519)
245 3dgh_A TRXR-1, thioredoxin red 55.3 11 0.00039 32.5 4.2 37 199-236 314-350 (483)
246 4dna_A Probable glutathione re 55.2 11 0.00037 32.5 4.0 38 198-237 293-330 (463)
247 3dk9_A Grase, GR, glutathione 54.4 11 0.00038 32.5 4.0 38 198-237 318-355 (478)
248 3dgz_A Thioredoxin reductase 2 54.4 12 0.00041 32.4 4.2 39 198-237 313-351 (488)
249 3fg2_P Putative rubredoxin red 54.4 13 0.00044 31.2 4.4 38 15-55 71-108 (404)
250 3kd9_A Coenzyme A disulfide re 53.6 15 0.00051 31.4 4.7 39 15-55 73-112 (449)
251 3qfa_A Thioredoxin reductase 1 53.1 13 0.00044 32.6 4.3 38 198-236 341-378 (519)
252 3jsk_A Cypbp37 protein; octame 53.1 9.4 0.00032 31.7 3.2 40 203-242 293-337 (344)
253 2a8x_A Dihydrolipoyl dehydroge 53.1 12 0.00042 32.1 4.1 36 199-236 297-332 (464)
254 3jsk_A Cypbp37 protein; octame 53.0 26 0.00088 29.0 5.8 50 7-56 165-250 (344)
255 1lqt_A FPRA; NADP+ derivative, 52.4 11 0.00037 32.5 3.6 41 201-242 349-389 (456)
256 3lad_A Dihydrolipoamide dehydr 52.4 13 0.00045 32.0 4.1 38 198-237 305-342 (476)
257 1v59_A Dihydrolipoamide dehydr 52.3 14 0.00048 31.8 4.3 38 198-237 312-349 (478)
258 2gjc_A Thiazole biosynthetic e 52.2 33 0.0011 28.1 6.3 50 7-56 151-238 (326)
259 3o0h_A Glutathione reductase; 51.9 13 0.00044 32.2 4.0 38 199-238 314-351 (484)
260 3cp8_A TRNA uridine 5-carboxym 51.9 14 0.00047 33.5 4.2 38 202-242 377-414 (641)
261 2hqm_A GR, grase, glutathione 51.7 13 0.00046 32.1 4.1 37 199-237 310-346 (479)
262 1ges_A Glutathione reductase; 51.3 14 0.00046 31.7 4.0 37 199-237 291-327 (450)
263 3urh_A Dihydrolipoyl dehydroge 51.1 13 0.00045 32.2 3.9 37 199-237 326-362 (491)
264 1pn0_A Phenol 2-monooxygenase; 50.5 26 0.0009 31.8 5.9 37 203-239 350-389 (665)
265 1cjc_A Protein (adrenodoxin re 50.3 11 0.00038 32.5 3.3 42 200-242 355-397 (460)
266 2v3a_A Rubredoxin reductase; a 50.3 15 0.00052 30.5 4.1 38 15-55 74-111 (384)
267 2x8g_A Thioredoxin glutathione 50.0 16 0.00055 32.6 4.4 38 199-237 421-458 (598)
268 2x8g_A Thioredoxin glutathione 50.0 40 0.0014 30.0 7.1 41 15-55 340-393 (598)
269 2gmh_A Electron transfer flavo 49.6 16 0.00056 32.5 4.4 43 15-57 158-217 (584)
270 3klj_A NAD(FAD)-dependent dehy 49.5 11 0.00036 31.7 3.0 40 198-237 252-293 (385)
271 3ces_A MNMG, tRNA uridine 5-ca 48.7 15 0.00052 33.3 4.0 35 203-240 384-418 (651)
272 1dxl_A Dihydrolipoamide dehydr 48.6 15 0.00052 31.5 3.9 37 199-237 305-341 (470)
273 1ebd_A E3BD, dihydrolipoamide 48.2 16 0.00053 31.3 3.9 36 199-236 296-331 (455)
274 1zmd_A Dihydrolipoyl dehydroge 48.0 16 0.00054 31.5 3.9 37 199-237 308-344 (474)
275 1fec_A Trypanothione reductase 47.4 17 0.00057 31.6 4.0 37 199-237 314-350 (490)
276 2wpf_A Trypanothione reductase 47.4 17 0.00057 31.7 4.0 36 199-236 318-353 (495)
277 3pl8_A Pyranose 2-oxidase; sub 47.2 17 0.00057 32.8 4.1 42 15-56 274-323 (623)
278 2r9z_A Glutathione amide reduc 46.5 18 0.00061 31.1 4.0 37 199-237 290-326 (463)
279 3v76_A Flavoprotein; structura 46.0 9.9 0.00034 32.4 2.3 34 201-234 380-416 (417)
280 2qae_A Lipoamide, dihydrolipoy 45.9 18 0.00061 31.1 4.0 38 199-237 302-339 (468)
281 1ojt_A Surface protein; redox- 45.4 18 0.00062 31.2 4.0 37 199-237 312-348 (482)
282 3g5s_A Methylenetetrahydrofola 45.4 13 0.00044 31.8 2.8 37 202-241 327-363 (443)
283 2yqu_A 2-oxoglutarate dehydrog 45.1 21 0.00073 30.4 4.3 37 199-237 290-326 (455)
284 2eq6_A Pyruvate dehydrogenase 44.8 19 0.00064 31.0 3.9 36 199-236 297-332 (464)
285 1rp0_A ARA6, thiazole biosynth 44.1 9.2 0.00032 30.4 1.7 40 202-241 232-276 (284)
286 1zk7_A HGII, reductase, mercur 44.0 20 0.00067 30.8 3.9 36 199-236 297-332 (467)
287 1qo8_A Flavocytochrome C3 fuma 43.9 11 0.00037 33.5 2.3 40 200-239 518-563 (566)
288 1xdi_A RV3303C-LPDA; reductase 43.8 19 0.00066 31.2 3.9 36 199-236 305-340 (499)
289 1mo9_A ORF3; nucleotide bindin 42.9 20 0.0007 31.3 3.9 36 199-236 341-376 (523)
290 1o94_A Tmadh, trimethylamine d 42.8 17 0.00058 33.5 3.4 47 7-55 576-644 (729)
291 1jnr_A Adenylylsulfate reducta 42.7 30 0.001 31.3 5.0 42 200-241 428-469 (643)
292 2zxi_A TRNA uridine 5-carboxym 42.5 20 0.00067 32.5 3.7 35 203-240 389-423 (637)
293 3gwf_A Cyclohexanone monooxyge 42.5 17 0.0006 32.0 3.4 33 21-57 352-384 (540)
294 1d4d_A Flavocytochrome C fumar 41.6 7.5 0.00026 34.6 0.9 37 201-237 525-567 (572)
295 1lvl_A Dihydrolipoamide dehydr 41.6 22 0.00076 30.4 3.9 36 199-236 293-328 (458)
296 3qvp_A Glucose oxidase; oxidor 40.5 32 0.0011 30.7 4.8 39 202-240 540-580 (583)
297 2gag_A Heterotetrameric sarcos 40.2 34 0.0012 32.6 5.2 42 14-55 329-381 (965)
298 1chu_A Protein (L-aspartate ox 40.1 17 0.00059 32.1 3.0 40 200-239 364-410 (540)
299 3uox_A Otemo; baeyer-villiger 39.9 34 0.0012 30.2 4.9 36 17-57 354-391 (545)
300 1y0p_A Fumarate reductase flav 39.8 12 0.00039 33.3 1.8 38 201-238 524-567 (571)
301 3t37_A Probable dehydrogenase; 39.8 30 0.001 30.1 4.5 42 15-56 225-270 (526)
302 2x3n_A Probable FAD-dependent 39.2 21 0.00072 29.7 3.3 36 204-239 286-324 (399)
303 1ju2_A HydroxynitrIle lyase; f 38.0 36 0.0012 29.9 4.7 42 15-56 208-260 (536)
304 3q9t_A Choline dehydrogenase a 36.6 39 0.0013 30.1 4.7 37 202-238 534-572 (577)
305 4g6h_A Rotenone-insensitive NA 35.3 33 0.0011 29.9 4.0 39 199-237 359-398 (502)
306 3rp8_A Flavoprotein monooxygen 35.2 24 0.00081 29.5 3.0 33 204-236 301-336 (407)
307 1lqt_A FPRA; NADP+ derivative, 34.4 42 0.0014 28.8 4.5 43 14-56 265-325 (456)
308 3c4a_A Probable tryptophan hyd 33.4 36 0.0012 28.1 3.8 34 204-237 262-298 (381)
309 3k30_A Histamine dehydrogenase 33.0 24 0.00083 32.1 2.9 35 201-238 639-673 (690)
310 4hb9_A Similarities with proba 32.8 38 0.0013 27.9 3.9 35 203-237 310-347 (412)
311 1gte_A Dihydropyrimidine dehyd 32.5 90 0.0031 30.0 6.8 42 13-54 382-439 (1025)
312 2vou_A 2,6-dihydroxypyridine h 32.4 28 0.00097 28.9 3.0 33 204-236 299-334 (397)
313 1cjc_A Protein (adrenodoxin re 31.5 40 0.0014 29.0 3.8 42 14-55 270-331 (460)
314 2qa2_A CABE, polyketide oxygen 31.1 43 0.0015 29.1 4.0 36 204-239 278-316 (499)
315 3c96_A Flavin-containing monoo 30.8 38 0.0013 28.3 3.6 34 204-237 303-339 (410)
316 1kf6_A Fumarate reductase flav 29.9 41 0.0014 30.1 3.7 41 199-239 368-415 (602)
317 4at0_A 3-ketosteroid-delta4-5a 29.9 31 0.0011 30.0 2.9 37 200-236 465-507 (510)
318 1gpe_A Protein (glucose oxidas 29.5 46 0.0016 29.7 4.0 39 202-240 544-584 (587)
319 2gv8_A Monooxygenase; FMO, FAD 29.2 41 0.0014 28.6 3.5 37 18-56 254-291 (447)
320 1onf_A GR, grase, glutathione 29.2 45 0.0015 28.9 3.8 39 199-237 300-370 (500)
321 1k0i_A P-hydroxybenzoate hydro 28.7 51 0.0017 27.2 4.0 36 204-239 279-317 (394)
322 3gyx_A Adenylylsulfate reducta 28.6 59 0.002 29.5 4.5 44 199-242 448-491 (662)
323 2r0c_A REBC; flavin adenine di 28.3 37 0.0013 29.9 3.1 37 203-239 308-347 (549)
324 1o94_A Tmadh, trimethylamine d 28.0 28 0.00097 32.0 2.4 35 201-238 664-698 (729)
325 2dkh_A 3-hydroxybenzoate hydro 27.3 40 0.0014 30.4 3.2 37 203-239 341-380 (639)
326 2gag_A Heterotetrameric sarcos 26.9 51 0.0017 31.5 4.0 37 201-240 408-444 (965)
327 2xdo_A TETX2 protein; tetracyc 26.0 47 0.0016 27.6 3.3 32 205-236 315-349 (398)
328 1pn0_A Phenol 2-monooxygenase; 25.1 59 0.002 29.5 3.9 16 16-31 137-152 (665)
329 3fim_B ARYL-alcohol oxidase; A 25.1 55 0.0019 29.1 3.6 36 202-237 527-564 (566)
330 1qey_A MNT-C, protein (regulat 24.8 46 0.0016 16.5 1.7 24 137-160 4-27 (31)
331 2bs2_A Quinol-fumarate reducta 24.5 75 0.0026 28.8 4.5 41 200-240 382-429 (660)
332 2vdc_G Glutamate synthase [NAD 24.2 75 0.0026 27.2 4.3 44 11-55 312-376 (456)
333 3alj_A 2-methyl-3-hydroxypyrid 23.3 34 0.0012 28.2 1.9 33 204-236 281-316 (379)
334 3f7w_A Putative fructosamine-3 22.8 71 0.0024 25.0 3.6 36 4-43 1-41 (288)
335 4ap3_A Steroid monooxygenase; 21.8 65 0.0022 28.4 3.4 32 21-57 365-396 (549)
336 3db7_A Putative calcium-regula 21.6 1.1E+02 0.0037 21.0 3.9 29 19-47 89-117 (127)
337 2wdq_A Succinate dehydrogenase 20.3 46 0.0016 29.7 2.2 40 202-241 379-425 (588)
No 1
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=100.00 E-value=2.8e-34 Score=263.68 Aligned_cols=237 Identities=36% Similarity=0.610 Sum_probs=200.4
Q ss_pred CCCChHHHHHHHhcCCceeeCcceeEEEEcCCceEEEEcC------CcEEEeCEEEEecChhhhhcC--cccccCCCcHH
Q 024393 1 MVRGYLPVINTLAKGLDIRLGHRVTKITRHYIGVKVTVEG------GKTFVADAVVVAVPLGVLKAR--TIKFEPRLPDW 72 (268)
Q Consensus 1 ~~gG~~~l~~~l~~~l~i~~~~~V~~I~~~~~~v~v~~~~------g~~~~ad~VI~a~p~~~l~~~--~~~~~p~l~~~ 72 (268)
++|||++|+++|+++++|++|++|++|+..+++|.|++.+ |++++||+||+|+|+..++++ .+.|.|+||+.
T Consensus 396 ~~gG~~~l~~~La~~l~I~l~~~V~~I~~~~~~v~V~~~~~~~~~~~~~~~Ad~VI~tvP~~vL~~l~~~i~f~P~LP~~ 475 (662)
T 2z3y_A 396 VRNGYSCVPVALAEGLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEW 475 (662)
T ss_dssp ETTCTTHHHHHHTTTCEEETTEEEEEEEEETTEEEEEEEESSCTTCEEEEEESEEEECCCHHHHHCSSCSSEEESCCCHH
T ss_pred ecCcHHHHHHHHHhcCceecCCeEEEEEECCCcEEEEEeecccCCCCeEEEeCEEEECCCHHHHhcccCceEEcCCCCHH
Confidence 3699999999999999999999999999999998888765 578999999999999999862 36789999999
Q ss_pred HHHHHhhcCCccccEEEEEeCCCCCCC-CccceeecCCC--C-ceeEEEeccccCCccEEEEEeccchHHHHhcCCHHHH
Q 024393 73 KEAAIDDLGVGIENKIIMHFDKVFWPN-VEFLGVVSDTS--Y-GCSYFLNLHKATGHCVLVYMPAGQLARDIEKMSDEAA 148 (268)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~--~-~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~e~ 148 (268)
+.++++++.|++..|+++.|+++||+. .+.+|.+.+.. . ....+++.. +.++|+.++.+..+..+..++++++
T Consensus 476 k~~Ai~~l~~g~~~KV~l~f~~~fW~~~~~~~G~l~~~~~~~~~~~~~~~~~---~~~vL~~~~~G~~a~~~~~lsdee~ 552 (662)
T 2z3y_A 476 KTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLY---KAPILLALVAGEAAGIMENISDDVI 552 (662)
T ss_dssp HHHHHHHSEECCCEEEEEECSSCCSCTTCSEEEECCSSSTTTTEEEEEECCS---SSSEEEEEECTHHHHHHTTSCHHHH
T ss_pred HHHHHHhCCccceeEEEEEcCcccccCCCCceeeecCCCCCCCceeEEEeCC---CCCEEEEEeccHhHHHHHhCCHHHH
Confidence 999999999999999999999999965 35677654321 1 123333322 4568888888988888999999999
Q ss_pred HHHHHHHHHHhcCC--CCCCcEEEEcccCCCcCCCcccCcCCCCCChHHHHHhcCCC-------------CCeeeeeccc
Q 024393 149 ANFAFTQLKKILPD--ASSPIQYLVSHWGTDANSLGSYSYDTVGKSHDLYERLRIPV-------------DNLFFAGEAT 213 (268)
Q Consensus 149 ~~~i~~~l~~~~p~--~~~~~~~~~~~w~~~~~~~g~~~~~~~~~~~~~~~~~~~p~-------------~~l~~aG~~~ 213 (268)
++.++++|+++||. ..+|..+.+++|.+++|+.|+|.++.+|.....++.+..|+ ++|||||+++
T Consensus 553 ~~~~l~~L~~~~g~~~~~~p~~~~v~~W~~dp~~~Gsys~~~pg~~~~~~~~l~~p~~~~~~~~~~~~~~grl~FAGe~t 632 (662)
T 2z3y_A 553 VGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAPQPIPRLFFAGEHT 632 (662)
T ss_dssp HHHHHHHHHHHHCTTSSCCCSEEEECCTTTCTTTSSSCEECBTTCCTHHHHHHHCCBCC---------CCCCEEECSGGG
T ss_pred HHHHHHHHHHHhCCcccCCCceeEEEEECCCCCCCcccccCCCCCchhhHHHHhCcCccccccccccCCCCcEEEEeccc
Confidence 99999999999986 35788999999999999999999888887655556565554 6899999999
Q ss_pred CCCCCccchhhHHHHHHHHHHHHHHHH
Q 024393 214 SMSYPGSVHGAFSTGLMAAEDCRMRVL 240 (268)
Q Consensus 214 ~~~~~g~~~gA~~Sg~~aa~~i~~~l~ 240 (268)
+..+.|+|+||+.||.+||++|++.+.
T Consensus 633 s~~~~g~v~GAi~SG~raA~~i~~~~~ 659 (662)
T 2z3y_A 633 IRNYPATVHGALLSGLREAGRIADQFL 659 (662)
T ss_dssp CTTSTTSHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCCcCHHHHHHHHHHHHHHHHHHcc
Confidence 987789999999999999999987653
No 2
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=100.00 E-value=8.5e-34 Score=264.23 Aligned_cols=238 Identities=36% Similarity=0.603 Sum_probs=201.0
Q ss_pred CCCChHHHHHHHhcCCceeeCcceeEEEEcCCceEEEEcC------CcEEEeCEEEEecChhhhhcC--cccccCCCcHH
Q 024393 1 MVRGYLPVINTLAKGLDIRLGHRVTKITRHYIGVKVTVEG------GKTFVADAVVVAVPLGVLKAR--TIKFEPRLPDW 72 (268)
Q Consensus 1 ~~gG~~~l~~~l~~~l~i~~~~~V~~I~~~~~~v~v~~~~------g~~~~ad~VI~a~p~~~l~~~--~~~~~p~l~~~ 72 (268)
++|||+.|+++|+++++|++|++|++|...+++|.|++.+ |++++||+||+|+|+..|..+ .+.|.|+||..
T Consensus 567 ~~gG~~~L~~aLa~~l~I~Lnt~V~~I~~~~~gV~V~~~~~~~~~~g~~i~AD~VIvTvPl~vLk~l~~~I~F~P~LP~~ 646 (852)
T 2xag_A 567 VRNGYSCVPVALAEGLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEW 646 (852)
T ss_dssp ETTCTTHHHHHHTTTCCEECSEEEEEEEEETTEEEEEEEESSSTTCEEEEEESEEEECCCHHHHHCSSCSSEEESCCCHH
T ss_pred ecCcHHHHHHHHHhCCCEEeCCeEEEEEEcCCcEEEEEeecccCCCCeEEECCEEEECCCHHHHHhhhcccccCCCCCHH
Confidence 3799999999999999999999999999999998888765 578999999999999999862 36789999999
Q ss_pred HHHHHhhcCCccccEEEEEeCCCCCCC-CccceeecCCC---CceeEEEeccccCCccEEEEEeccchHHHHhcCCHHHH
Q 024393 73 KEAAIDDLGVGIENKIIMHFDKVFWPN-VEFLGVVSDTS---YGCSYFLNLHKATGHCVLVYMPAGQLARDIEKMSDEAA 148 (268)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~---~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~e~ 148 (268)
+.++++++.|++..|+++.|+++||+. .+.+|.+.... .....+++.. +.++|++|+.+..+..+..++++++
T Consensus 647 k~~AI~~l~~g~v~KV~L~F~~~fW~~~~~~fG~l~~~~~~~~~l~~~~~~~---~~pvLl~~v~G~~a~~l~~lsdeel 723 (852)
T 2xag_A 647 KTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLY---KAPILLALVAGEAAGIMENISDDVI 723 (852)
T ss_dssp HHHHHHHSEECCCEEEEEECSSCCSCTTCCEEEECCSSSTTTTTTCEEEECS---SSSEEEEEECHHHHHHGGGSCHHHH
T ss_pred HHHHHHcCCccceEEEEEEcCCcccCCCCCeeeeeccccCCCCceEEEecCC---CCCEEEEEecCcCHHHHhcCCHHHH
Confidence 999999999999999999999999965 45677654321 1223333332 4468888888888888889999999
Q ss_pred HHHHHHHHHHhcCC--CCCCcEEEEcccCCCcCCCcccCcCCCCCChHHHHHhcCCC-------------CCeeeeeccc
Q 024393 149 ANFAFTQLKKILPD--ASSPIQYLVSHWGTDANSLGSYSYDTVGKSHDLYERLRIPV-------------DNLFFAGEAT 213 (268)
Q Consensus 149 ~~~i~~~l~~~~p~--~~~~~~~~~~~w~~~~~~~g~~~~~~~~~~~~~~~~~~~p~-------------~~l~~aG~~~ 213 (268)
++.++++|.++|+. ..+|..+.+++|.+++|+.|+|.++.+|.....++.+..|+ ++|||||+++
T Consensus 724 ~~~~l~~L~~ifG~~~~~~P~~~~vtrW~~dp~s~GsYs~~~pG~~~~~~~~L~~P~~~~~~~p~~~~~~grL~FAGE~T 803 (852)
T 2xag_A 724 VGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAPQPIPRLFFAGEHT 803 (852)
T ss_dssp HHHHHHHHHHHHCTTTCCCCSEEEECCTTTCTTTSSSCEECBTTCCTTHHHHTTSCBCCCCSSTTCCCCCCCEEECSGGG
T ss_pred HHHHHHHHHHHhCccccCCceEEEEEecCCCCCcCccccccCCCcchhhHHHHhCccccccccccccCCCCcEEEEehhH
Confidence 99999999999986 34788999999999999999999888887655556666554 6899999999
Q ss_pred CCCCCccchhhHHHHHHHHHHHHHHHHH
Q 024393 214 SMSYPGSVHGAFSTGLMAAEDCRMRVLE 241 (268)
Q Consensus 214 ~~~~~g~~~gA~~Sg~~aa~~i~~~l~~ 241 (268)
+..+.|+|+||+.||.+||++|+..+..
T Consensus 804 s~~~~gtveGAi~SG~RAA~~Il~~l~~ 831 (852)
T 2xag_A 804 IRNYPATVHGALLSGLREAGRIADQFLG 831 (852)
T ss_dssp CTTSTTSHHHHHHHHHHHHHHHHHHHHC
T ss_pred hCCCCcCHHHHHHHHHHHHHHHHHHhhC
Confidence 9877899999999999999999987654
No 3
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=100.00 E-value=8.4e-33 Score=247.94 Aligned_cols=238 Identities=23% Similarity=0.356 Sum_probs=196.6
Q ss_pred CCCChHHHHHHHhc--CCceeeCcceeEEEEcCCceEEEEcCCcEEEeCEEEEecChhhhhcCcccccCCCcHHHHHHHh
Q 024393 1 MVRGYLPVINTLAK--GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAID 78 (268)
Q Consensus 1 ~~gG~~~l~~~l~~--~l~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~l~~~~~~~~p~l~~~~~~~~~ 78 (268)
++|||+.|+++|++ +.+|++|++|++|+.+++++.|++.+|+++.||+||+|+|+..+.. +.+.|.||+.+.++++
T Consensus 210 ~~gG~~~l~~~l~~~lg~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~l~~--l~~~p~lp~~~~~~i~ 287 (520)
T 1s3e_A 210 FVGGSGQVSERIMDLLGDRVKLERPVIYIDQTRENVLVETLNHEMYEAKYVISAIPPTLGMK--IHFNPPLPMMRNQMIT 287 (520)
T ss_dssp ETTCTHHHHHHHHHHHGGGEESSCCEEEEECSSSSEEEEETTSCEEEESEEEECSCGGGGGG--SEEESCCCHHHHHHTT
T ss_pred EeCCHHHHHHHHHHHcCCcEEcCCeeEEEEECCCeEEEEECCCeEEEeCEEEECCCHHHHcc--eeeCCCCCHHHHHHHH
Confidence 36999999999998 4589999999999998888999998998999999999999999864 4578999999888999
Q ss_pred hcCCccccEEEEEeCCCCCCCCccceeec--CCCCceeE-EEeccccCCccEEEEEeccchHHHHhcCCHHHHHHHHHHH
Q 024393 79 DLGVGIENKIIMHFDKVFWPNVEFLGVVS--DTSYGCSY-FLNLHKATGHCVLVYMPAGQLARDIEKMSDEAAANFAFTQ 155 (268)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~-~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~e~~~~i~~~ 155 (268)
++.+++..|+++.|+++||++.++.|... ....+... ++....+++.++++.++.+..+..|.+++++++++.++++
T Consensus 288 ~~~~~~~~kv~l~~~~~~w~~~~~~g~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~a~~~~~~~~~e~~~~vl~~ 367 (520)
T 1s3e_A 288 RVPLGSVIKCIVYYKEPFWRKKDYCGTMIIDGEEAPVAYTLDDTKPEGNYAAIMGFILAHKARKLARLTKEERLKKLCEL 367 (520)
T ss_dssp SCCBCCEEEEEEECSSCGGGGGTEEEEEEECSTTCSCSEEEECCCTTSCSCEEEEEEETHHHHHHTTSCHHHHHHHHHHH
T ss_pred hCCCcceEEEEEEeCCCcccCCCCCceeeccCCCCceEEEeeCCCCCCCCCEEEEEccchhhhhhhcCCHHHHHHHHHHH
Confidence 99999999999999999996655545432 22233333 3332233344688888888778889899999999999999
Q ss_pred HHHhcCC--CCCCcEEEEcccCCCcCCCcccC-cCCCCCChHHHHHhcCCCCCeeeeecccCCCCCccchhhHHHHHHHH
Q 024393 156 LKKILPD--ASSPIQYLVSHWGTDANSLGSYS-YDTVGKSHDLYERLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAA 232 (268)
Q Consensus 156 l~~~~p~--~~~~~~~~~~~w~~~~~~~g~~~-~~~~~~~~~~~~~~~~p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa 232 (268)
|+++||. ..+|.++..++|.+++|+.|+|. ...++....+.+.+++|++||||||++++..++|+++||+.||.+||
T Consensus 368 L~~~~~~~~~~~p~~~~~~~W~~~~~~~G~~~~~~~~g~~~~~~~~l~~p~~~L~fAG~~t~~~~~g~v~GAi~SG~~aA 447 (520)
T 1s3e_A 368 YAKVLGSLEALEPVHYEEKNWCEEQYSGGCYTTYFPPGILTQYGRVLRQPVDRIYFAGTETATHWSGYMEGAVEAGERAA 447 (520)
T ss_dssp HHHHHTCGGGGCCSEEEEEEGGGCTTTCSSSCBCCCTTHHHHHGGGTTCCBTTEEECSGGGCSSSTTSHHHHHHHHHHHH
T ss_pred HHHHhCccccCCccEEEEEeeCCCCCCCCCCccccCCCccccchHHHhCCCCCEEEeehhhcCcCcEEhHHHHHHHHHHH
Confidence 9999986 35788999999999999999987 56666544444567889999999999998767789999999999999
Q ss_pred HHHHHHHH
Q 024393 233 EDCRMRVL 240 (268)
Q Consensus 233 ~~i~~~l~ 240 (268)
+.|++.+.
T Consensus 448 ~~i~~~l~ 455 (520)
T 1s3e_A 448 REILHAMG 455 (520)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHHh
Confidence 99988764
No 4
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=100.00 E-value=1.5e-32 Score=254.35 Aligned_cols=237 Identities=31% Similarity=0.558 Sum_probs=201.5
Q ss_pred CCCChHHHHHHHhcCCceeeCcceeEEEEcCCceEEEEcCCcEEEeCEEEEecChhhhhcCcccccCCCcHHHHHHHhhc
Q 024393 1 MVRGYLPVINTLAKGLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDDL 80 (268)
Q Consensus 1 ~~gG~~~l~~~l~~~l~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~l~~~~~~~~p~l~~~~~~~~~~~ 80 (268)
+.+|++.|.++|+++++|+++++|++|+.++++|.|++.+|+++.||+||+|+|+..+....+.|.|+||+.+.++++++
T Consensus 529 ~~~G~~~l~~aLa~gl~I~l~t~V~~I~~~~~~v~V~~~~G~~i~Ad~VIvA~P~~vL~~~~i~f~P~Lp~~~~~ai~~l 608 (776)
T 4gut_A 529 LTPGYSVIIEKLAEGLDIQLKSPVQCIDYSGDEVQVTTTDGTGYSAQKVLVTVPLALLQKGAIQFNPPLSEKKMKAINSL 608 (776)
T ss_dssp CTTCTHHHHHHHHTTSCEESSCCEEEEECSSSSEEEEETTCCEEEESEEEECCCHHHHHTTCSEEESCCCHHHHHHHHHE
T ss_pred ECChHHHHHHHHHhCCcEEcCCeeEEEEEcCCEEEEEECCCcEEEcCEEEECCCHHHHhhcccccCCCCCHHHHHHHHhC
Confidence 46899999999999999999999999999988999999999899999999999999997656789999999999999999
Q ss_pred CCccccEEEEEeCCCCCCC----CccceeecCCC---CceeEEEeccccCCccEEEEEeccchHHHHhcCCHHHHHHHHH
Q 024393 81 GVGIENKIIMHFDKVFWPN----VEFLGVVSDTS---YGCSYFLNLHKATGHCVLVYMPAGQLARDIEKMSDEAAANFAF 153 (268)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~----~~~~g~~~~~~---~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~e~~~~i~ 153 (268)
.+++..|+++.|+++||++ .+++|.+.... .....+.+..+.++..+|+.++.++.+..+..++++++++.++
T Consensus 609 ~~g~~~KV~l~f~~~FW~~~~~g~~~fG~l~~~~~~~~~~~~~~d~~p~g~~~vL~~~i~G~~a~~l~~lsdeel~~~~l 688 (776)
T 4gut_A 609 GAGIIEKIALQFPYRFWDSKVQGADFFGHVPPSASKRGLFAVFYDMDPQKKHSVLMSVIAGEAVASVRTLDDKQVLQQCM 688 (776)
T ss_dssp EEECCEEEEEECSSCTTHHHHTTCSEEEECCSSGGGTTEEEEEEESCTTSCSCEEEEEECTHHHHHHHTSCHHHHHHHHH
T ss_pred CCeeEEEEEEecCcccccccCCCCceEEeecCCcCCCceEEEEecCCCCCCceEEEEEecchhHHHHHcCCHHHHHHHHH
Confidence 9999999999999999953 24556554321 1223333333333456888888888888899999999999999
Q ss_pred HHHHHhcCC--CCCCcEEEEcccCCCcCCCcccCcCCCCCChHHHHHhcCCC-CCeeeeecccCCCCCccchhhHHHHHH
Q 024393 154 TQLKKILPD--ASSPIQYLVSHWGTDANSLGSYSYDTVGKSHDLYERLRIPV-DNLFFAGEATSMSYPGSVHGAFSTGLM 230 (268)
Q Consensus 154 ~~l~~~~p~--~~~~~~~~~~~w~~~~~~~g~~~~~~~~~~~~~~~~~~~p~-~~l~~aG~~~~~~~~g~~~gA~~Sg~~ 230 (268)
++|+++||. ...|..+.+++|.+++|+.|+|....++.....++.+..|. ++|||||++++..+.|+|+||+.||.+
T Consensus 689 ~~L~~ifg~~~~~~P~~~~vt~W~~dp~s~Gsys~~~~g~~~~~~~~L~~p~~grL~FAGE~Ts~~~~gtveGAi~SG~R 768 (776)
T 4gut_A 689 ATLRELFKEQEVPDPTKYFVTRWSTDPWIQMAYSFVKTGGSGEAYDIIAEDIQGTVFFAGEATNRHFPQTVTGAYLSGVR 768 (776)
T ss_dssp HHHHHHTTTSCCCCCSEEEECCGGGCTTTCCSEEEEBTTCCTHHHHHHHCCBTTTEEECSGGGCSSSCSSHHHHHHHHHH
T ss_pred HHHHHHhCcccccCcceEEEecCCCCCccCCCCCccCCCCchhHHHHHhCcCCCcEEEEehhhcCCCCcCHHHHHHHHHH
Confidence 999999986 45788999999999999999999877777655567777775 899999999998778999999999999
Q ss_pred HHHHHHH
Q 024393 231 AAEDCRM 237 (268)
Q Consensus 231 aa~~i~~ 237 (268)
+|++|++
T Consensus 769 aA~~Ila 775 (776)
T 4gut_A 769 EASKIAA 775 (776)
T ss_dssp HHHHHHC
T ss_pred HHHHHHh
Confidence 9999963
No 5
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=100.00 E-value=1.1e-31 Score=238.01 Aligned_cols=240 Identities=31% Similarity=0.508 Sum_probs=195.6
Q ss_pred CCChHHHHHHHhcCC-------------ceeeCcceeEEEEcCCceEEEEcCCcEEEeCEEEEecChhhhhcCcccccCC
Q 024393 2 VRGYLPVINTLAKGL-------------DIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPR 68 (268)
Q Consensus 2 ~gG~~~l~~~l~~~l-------------~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~l~~~~~~~~p~ 68 (268)
+|||+.|+++|++.+ +|+++++|++|+.+++++.|++.+|++++||+||+|+|+..+..+.+.|.|.
T Consensus 202 ~gG~~~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~~l~~~~~~~~p~ 281 (472)
T 1b37_A 202 QRGYEAVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSPGGVTVKTEDNSVYSADYVMVSASLGVLQSDLIQFKPK 281 (472)
T ss_dssp TTCTTHHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECSSCEEEEETTSCEEEESEEEECSCHHHHHTTSSEEESC
T ss_pred CCcHHHHHHHHHHhccccccccccccccEEEcCCEEEEEEEcCCcEEEEECCCCEEEcCEEEEecCHHHhccCCeeECCC
Confidence 689999999998764 6999999999999988999999999899999999999999998655668899
Q ss_pred CcHHHHHHHhhcCCccccEEEEEeCCCCCCCCccceee--cCCCCc-eeEEEec--cccCCccEEEEEeccchHHHHhcC
Q 024393 69 LPDWKEAAIDDLGVGIENKIIMHFDKVFWPNVEFLGVV--SDTSYG-CSYFLNL--HKATGHCVLVYMPAGQLARDIEKM 143 (268)
Q Consensus 69 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~-~~~~~~~--~~~~g~~~l~~~~~~~~~~~~~~~ 143 (268)
||+.++++++++.+++..|+++.|+++||+.....+.. .+.+.. ...+... ..| +..+++.++.++.+..|..+
T Consensus 282 Lp~~~~~ai~~~~~~~~~kv~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~l~~~~~~~~a~~~~~~ 360 (472)
T 1b37_A 282 LPTWKVRAIYQFDMAVYTKIFLKFPRKFWPEGKGREFFLYASSRRGYYGVWQEFEKQYP-DANVLLVTVTDEESRRIEQQ 360 (472)
T ss_dssp CCHHHHHHHHHSEEECEEEEEEECSSCCSCCSTTCSEEEECCSSTTSSCEEEECTTTST-TCCEEEEEEEHHHHHHHHTS
T ss_pred CCHHHHHHHHhcCCcceeEEEEECCCcCCCCCCCcceEEecccCCccceeeecccCCCC-CCCEEEEEechHHHHHHHhC
Confidence 99998899999999999999999999999653222221 111111 1122211 123 44567666666666678888
Q ss_pred CHHHHHHHHHHHHHHhcCC--CCCCcEEEEcccCCCcCCCcccCcCCCCCChHHHHHhcCCCCCeeeeecccCCCCCccc
Q 024393 144 SDEAAANFAFTQLKKILPD--ASSPIQYLVSHWGTDANSLGSYSYDTVGKSHDLYERLRIPVDNLFFAGEATSMSYPGSV 221 (268)
Q Consensus 144 ~~~e~~~~i~~~l~~~~p~--~~~~~~~~~~~w~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~l~~aG~~~~~~~~g~~ 221 (268)
+++++.+.++++|+++||. ..+++++.+++|..++++.|+|....+|.....++.+++|+++|||||+++++.++|+|
T Consensus 361 ~~~e~~~~~l~~L~~~~Pg~~~~~~~~~~~~~W~~~~~~~G~~~~~~~g~~~~~~~~l~~p~~~l~fAG~~t~~~~~g~v 440 (472)
T 1b37_A 361 SDEQTKAEIMQVLRKMFPGKDVPDATDILVPRWWSDRFYKGTFSNWPVGVNRYEYDQLRAPVGRVYFTGEHTSEHYNGYV 440 (472)
T ss_dssp CHHHHHHHHHHHHHHHCTTSCCCCCSEEECCCTTTCTTTSSSEEECBTTCCHHHHHHHHCCBTTEEECSGGGCTTTTTSH
T ss_pred CHHHHHHHHHHHHHHHcCCCCCCCCceEEecccCCCCCCCcccCCCCCCCChhHHHHHhccCCcEEEeecccCCCCCCch
Confidence 9999999999999999975 45778888899999999999998777887655567889999999999999998767899
Q ss_pred hhhHHHHHHHHHHHHHHHHHH
Q 024393 222 HGAFSTGLMAAEDCRMRVLER 242 (268)
Q Consensus 222 ~gA~~Sg~~aa~~i~~~l~~~ 242 (268)
+||+.||.+||+.|++.+...
T Consensus 441 ~GA~~SG~~aA~~i~~~l~~~ 461 (472)
T 1b37_A 441 HGAYLSGIDSAEILINCAQKK 461 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999887654
No 6
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=100.00 E-value=1.1e-32 Score=243.02 Aligned_cols=236 Identities=22% Similarity=0.315 Sum_probs=191.8
Q ss_pred CCCChHHHHHHHhcCC--ceeeCcceeEEEEcCCc-eEEEEcCCcEEEeCEEEEecChhhhhcCcccccCCCcHHHHHHH
Q 024393 1 MVRGYLPVINTLAKGL--DIRLGHRVTKITRHYIG-VKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAI 77 (268)
Q Consensus 1 ~~gG~~~l~~~l~~~l--~i~~~~~V~~I~~~~~~-v~v~~~~g~~~~ad~VI~a~p~~~l~~~~~~~~p~l~~~~~~~~ 77 (268)
++|||+.|+++|++.+ +|++|++|++|..++++ +.|++ +|+++.||+||+|+|+..+.. +.+.|.||+.+.+++
T Consensus 210 ~~gG~~~l~~~l~~~lg~~i~~~~~V~~i~~~~~~~v~v~~-~~~~~~ad~VI~a~p~~~~~~--l~~~p~lp~~~~~~i 286 (453)
T 2yg5_A 210 VIGGMQQVSIRMAEALGDDVFLNAPVRTVKWNESGATVLAD-GDIRVEASRVILAVPPNLYSR--ISYDPPLPRRQHQMH 286 (453)
T ss_dssp ETTCTHHHHHHHHHHHGGGEECSCCEEEEEEETTEEEEEET-TTEEEEEEEEEECSCGGGGGG--SEEESCCCHHHHHHG
T ss_pred EcCChHHHHHHHHHhcCCcEEcCCceEEEEEeCCceEEEEE-CCeEEEcCEEEEcCCHHHHhc--CEeCCCCCHHHHHHH
Confidence 3699999999999866 89999999999998888 88876 677899999999999998864 457789999888899
Q ss_pred hhcCCccccEEEEEeCCCCCCCCccceeecCCCCceeEEEeccccCC-ccEEEEEeccchHHHHhcCCHHHHHHHHHHHH
Q 024393 78 DDLGVGIENKIIMHFDKVFWPNVEFLGVVSDTSYGCSYFLNLHKATG-HCVLVYMPAGQLARDIEKMSDEAAANFAFTQL 156 (268)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g-~~~l~~~~~~~~~~~~~~~~~~e~~~~i~~~l 156 (268)
+++.+++..|+++.|++++|+..++.|.......+.....+...+++ ..+++.++.++.+..|.+++++++++.++++|
T Consensus 287 ~~~~~~~~~kv~l~~~~~~w~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~L 366 (453)
T 2yg5_A 287 QHQSLGLVIKVHAVYETPFWREDGLSGTGFGASEVVQEVYDNTNHEDDRGTLVAFVSDEKADAMFELSAEERKATILASL 366 (453)
T ss_dssp GGEEECCEEEEEEEESSCGGGGGTEEEEEECTTSSSCEEEECCCTTCSSEEEEEEEEHHHHHHHHHSCHHHHHHHHHHHH
T ss_pred hcCCCcceEEEEEEECCCCCCCCCCCceeecCCCCeEEEEeCCCCCCCCCEEEEEeccHHHHHHhcCCHHHHHHHHHHHH
Confidence 99999999999999999999655444554333333333322224444 46777888777778888899999999999999
Q ss_pred HHhcCC-CCCCcEEEEcccCCCcCCCcccC-cCCCCCChHHHHHhcCCCCCeeeeecccCCCCCccchhhHHHHHHHHHH
Q 024393 157 KKILPD-ASSPIQYLVSHWGTDANSLGSYS-YDTVGKSHDLYERLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAED 234 (268)
Q Consensus 157 ~~~~p~-~~~~~~~~~~~w~~~~~~~g~~~-~~~~~~~~~~~~~~~~p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~ 234 (268)
+++||. ..+|.++..++|.+++|+.|+|. ...++......+.+++|++||||||++++..++|+++||+.||.+||++
T Consensus 367 ~~~~~~~~~~p~~~~~~~W~~~~~~~G~~~~~~~~g~~~~~~~~~~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~ 446 (453)
T 2yg5_A 367 ARYLGPKAEEPVVYYESDWGSEEWTRGCYAASFDLGGLHRYGADSRTPVGPIHFSCSDIAAEGYQHVDGAVRMGQRTAAD 446 (453)
T ss_dssp HHHHCGGGGCCSEEEECCTTTCTTTCSSSCEEECTTHHHHHGGGTTCCBTTEEECCGGGCSTTTTSHHHHHHHHHHHHHH
T ss_pred HHHhCccCCCccEEEEeecCCCCCCCCCCcCcCCCCccccchHHHhCCcCceEEeecccccccccchHHHHHHHHHHHHH
Confidence 999986 45788999999999999999886 4456644334456788999999999999876678999999999999999
Q ss_pred HHHHH
Q 024393 235 CRMRV 239 (268)
Q Consensus 235 i~~~l 239 (268)
|++.+
T Consensus 447 i~~~l 451 (453)
T 2yg5_A 447 IIARS 451 (453)
T ss_dssp HHHHC
T ss_pred HHHHh
Confidence 98764
No 7
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=99.98 E-value=1.9e-31 Score=237.89 Aligned_cols=238 Identities=22% Similarity=0.307 Sum_probs=192.9
Q ss_pred CCCChHHHHHHHhcCC--ceeeCcceeEEEEcCCceEEEEcCCc----EEEeCEEEEecChhhhhcCcccccCCCcHHHH
Q 024393 1 MVRGYLPVINTLAKGL--DIRLGHRVTKITRHYIGVKVTVEGGK----TFVADAVVVAVPLGVLKARTIKFEPRLPDWKE 74 (268)
Q Consensus 1 ~~gG~~~l~~~l~~~l--~i~~~~~V~~I~~~~~~v~v~~~~g~----~~~ad~VI~a~p~~~l~~~~~~~~p~l~~~~~ 74 (268)
++|||++|+++|++.+ +|++|++|++|+.++++|.|++.+|+ +++||+||+|+|+..+. .+.|.|+||+.+.
T Consensus 236 ~~gG~~~l~~~l~~~l~~~i~~~~~V~~I~~~~~~v~v~~~~~~~~~~~~~ad~vI~t~p~~~~~--~i~f~p~Lp~~~~ 313 (498)
T 2iid_A 236 IVDGMDKLPTAMYRDIQDKVHFNAQVIKIQQNDQKVTVVYETLSKETPSVTADYVIVCTTSRAVR--LIKFNPPLLPKKA 313 (498)
T ss_dssp ETTCTTHHHHHHHHHTGGGEESSCEEEEEEECSSCEEEEEECSSSCCCEEEESEEEECSCHHHHT--TSEEESCCCHHHH
T ss_pred eCCcHHHHHHHHHHhcccccccCCEEEEEEECCCeEEEEEecCCcccceEEeCEEEECCChHHHh--heecCCCCCHHHH
Confidence 3699999999999988 79999999999999888998887764 58999999999999876 4667899999999
Q ss_pred HHHhhcCCccccEEEEEeCCCCCCCCccceeec--CCCCceeEEEeccccCCccEEEEEeccchHHHHhcCCHHHHHHHH
Q 024393 75 AAIDDLGVGIENKIIMHFDKVFWPNVEFLGVVS--DTSYGCSYFLNLHKATGHCVLVYMPAGQLARDIEKMSDEAAANFA 152 (268)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~e~~~~i 152 (268)
++++++.|++..|+++.|+++||++.++.|... ..+....++++...|++..+|+.++.++.+..|..++++++.+.+
T Consensus 314 ~ai~~l~~~~~~kv~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~s~~~p~g~~~L~~~~~g~~a~~~~~~~~~~~~~~~ 393 (498)
T 2iid_A 314 HALRSVHYRSGTKIFLTCTTKFWEDDGIHGGKSTTDLPSRFIYYPNHNFTNGVGVIIAYGIGDDANFFQALDFKDCADIV 393 (498)
T ss_dssp HHHHHCCEECEEEEEEEESSCGGGGGTCCSSEEEESSTTCEEECCSSCCTTSCEEEEEEEEHHHHHTTTTSCHHHHHHHH
T ss_pred HHHHhCCCcceeEEEEEeCCCCccCCCccCCcccCCCCcceEEECCCCCCCCCcEEEEEeCCccHhhhhcCCHHHHHHHH
Confidence 999999999999999999999996544433321 112223334443346677788888888777778889999999999
Q ss_pred HHHHHHhcCCCCC-----CcEEEEcccCCCcCCCcccCcCCCCCChHHHHHhcCCCCCeeeeecccCCCCCccchhhHHH
Q 024393 153 FTQLKKILPDASS-----PIQYLVSHWGTDANSLGSYSYDTVGKSHDLYERLRIPVDNLFFAGEATSMSYPGSVHGAFST 227 (268)
Q Consensus 153 ~~~l~~~~p~~~~-----~~~~~~~~w~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~l~~aG~~~~~~~~g~~~gA~~S 227 (268)
+++|+++++.... ...+.+++|.+++|+.|+|....++....+.+.+++|.++|||||++++.. .|+|+||+.|
T Consensus 394 l~~L~~~~g~~~~~~~~~~~~~~~~~W~~~p~~~G~~~~~~~~~~~~~~~~l~~p~~~l~fAGe~t~~~-~g~~~GAi~S 472 (498)
T 2iid_A 394 FNDLSLIHQLPKKDIQSFCYPSVIQKWSLDKYAMGGITTFTPYQFQHFSDPLTASQGRIYFAGEYTAQA-HGWIDSTIKS 472 (498)
T ss_dssp HHHHHHHHTCCHHHHHHHEEEEEEEEGGGCTTTCSSEECCCTTHHHHHHHHHHCCBTTEEECSGGGSSS-SSCHHHHHHH
T ss_pred HHHHHHHcCCChhhhhhhcCccEEEecCCCCCCCceeeecCCcchHHHHHHHhCCCCcEEEEEcccccC-CcCHHHHHHH
Confidence 9999999984111 123667899999999999987777765555677888999999999999765 3799999999
Q ss_pred HHHHHHHHHHHHHH
Q 024393 228 GLMAAEDCRMRVLE 241 (268)
Q Consensus 228 g~~aa~~i~~~l~~ 241 (268)
|.+||++|++.+..
T Consensus 473 G~raA~~i~~~l~~ 486 (498)
T 2iid_A 473 GLRAARDVNLASEN 486 (498)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhcC
Confidence 99999999988754
No 8
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.97 E-value=3e-30 Score=230.06 Aligned_cols=231 Identities=19% Similarity=0.270 Sum_probs=187.2
Q ss_pred CCChHHHHHHHhcC------CceeeCcceeEEEEcCCceEEEEcCCcEEEeCEEEEecChhhhhcCcccccCCCcHHHHH
Q 024393 2 VRGYLPVINTLAKG------LDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEA 75 (268)
Q Consensus 2 ~gG~~~l~~~l~~~------l~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~l~~~~~~~~p~l~~~~~~ 75 (268)
+||++.|+++|++. ++|+++++|++|+.+++++.|++.+|+++.||+||+|+|+..+.. +.|.|.||+.+.+
T Consensus 251 ~gG~~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~~l~~--i~~~p~lp~~~~~ 328 (495)
T 2vvm_A 251 KDGQSAFARRFWEEAAGTGRLGYVFGCPVRSVVNERDAARVTARDGREFVAKRVVCTIPLNVLST--IQFSPALSTERIS 328 (495)
T ss_dssp TTCHHHHHHHHHHHHHTTTCEEEESSCCEEEEEECSSSEEEEETTCCEEEEEEEEECCCGGGGGG--SEEESCCCHHHHH
T ss_pred CCCHHHHHHHHHHHhhhcCceEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCHHHHhh--eeeCCCCCHHHHH
Confidence 68999999999875 459999999999998888999998888899999999999999874 4578999999889
Q ss_pred HHhhcCCccccEEEEEeCCCCCCCCccceeecCCCCceeEEEeccccCCccEEEEEeccchHHHHhcCCHHHHHHHHHHH
Q 024393 76 AIDDLGVGIENKIIMHFDKVFWPNVEFLGVVSDTSYGCSYFLNLHKATGHCVLVYMPAGQLARDIEKMSDEAAANFAFTQ 155 (268)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~e~~~~i~~~ 155 (268)
+++.+.|.+..|+++.|++++|. ++.|...........+.+...|++..+++.+... .. .+++++..+.++++
T Consensus 329 ai~~~~~~~~~kv~l~~~~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~vl~~~~~~-~~----~~~~~e~~~~~~~~ 401 (495)
T 2vvm_A 329 AMQAGHVSMCTKVHAEVDNKDMR--SWTGIAYPFNKLCYAIGDGTTPAGNTHLVCFGNS-AN----HIQPDEDVRETLKA 401 (495)
T ss_dssp HHHHCCCCCCEEEEEEESCGGGG--GEEEEECSSCSSCEEEEEEECTTSCEEEEEEECS-TT----CCCTTTCHHHHHHH
T ss_pred HHHhcCCCceeEEEEEECCccCC--CceeEecCCCCcEEEecCCCCCCCCeEEEEEeCc-cc----cCCCHHHHHHHHHH
Confidence 99999999999999999999883 3444443322222223333346666777776532 22 14556778889999
Q ss_pred HHHhcCCCCCCcEEEEcccCCCcCCCcccCcCCCCCChHHHHHhcCCCCCeeeeecccCCCCCccchhhHHHHHHHHHHH
Q 024393 156 LKKILPDASSPIQYLVSHWGTDANSLGSYSYDTVGKSHDLYERLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDC 235 (268)
Q Consensus 156 l~~~~p~~~~~~~~~~~~w~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i 235 (268)
|++++|...+|..+..++|.+++|+.|+|....||.....++.+++|.++|||||++++..++|+|+||+.||.+||++|
T Consensus 402 L~~~~~~~~~~~~~~~~~W~~dp~~~g~y~~~~~g~~~~~~~~l~~p~~~l~fAGe~t~~~~~g~veGAi~SG~raA~~i 481 (495)
T 2vvm_A 402 VGQLAPGTFGVKRLVFHNWVKDEFAKGAWFFSRPGMVSECLQGLREKHGGVVFANSDWALGWRSFIDGAIEEGTRAARVV 481 (495)
T ss_dssp HHTTSTTSCCEEEEEECCTTTCTTTSSSSCCCCTTHHHHHHHHHHCCBTTEEECCGGGCSSSTTSHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCCCceEEEEeEcCCCCCCCCCccCcCCCcchhhHHHHhCcCCCEEEechhhhcCCceEEEhHHHHHHHHHHHH
Confidence 99999875678888999999999999999888887755557788899999999999999777899999999999999999
Q ss_pred HHHHHH
Q 024393 236 RMRVLE 241 (268)
Q Consensus 236 ~~~l~~ 241 (268)
++.+..
T Consensus 482 ~~~l~~ 487 (495)
T 2vvm_A 482 LEELGT 487 (495)
T ss_dssp HHHHCC
T ss_pred HHHhcc
Confidence 887643
No 9
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=99.97 E-value=4.1e-29 Score=223.79 Aligned_cols=238 Identities=27% Similarity=0.426 Sum_probs=185.1
Q ss_pred hHHHHHHHhcCC---ceeeCcceeEEEEc-CCceEEEEcCCcEEEeCEEEEecChhhhhcC---------cccccCCCcH
Q 024393 5 YLPVINTLAKGL---DIRLGHRVTKITRH-YIGVKVTVEGGKTFVADAVVVAVPLGVLKAR---------TIKFEPRLPD 71 (268)
Q Consensus 5 ~~~l~~~l~~~l---~i~~~~~V~~I~~~-~~~v~v~~~~g~~~~ad~VI~a~p~~~l~~~---------~~~~~p~l~~ 71 (268)
++.|+++|++.+ +|++|++|++|..+ ++++.|++.+|+++.||+||+|+|+..+... .+.|.|+||+
T Consensus 201 ~~~l~~~l~~~l~~~~i~~~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~p~~~l~~~~~~~~~~~~~i~f~P~Lp~ 280 (516)
T 1rsg_A 201 YDSVVQRIAQSFPQNWLKLSCEVKSITREPSKNVTVNCEDGTVYNADYVIITVPQSVLNLSVQPEKNLRGRIEFQPPLKP 280 (516)
T ss_dssp HHHHHHHHHTTSCGGGEETTCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCCHHHHHGGGSSCSCSTTCCEEESCCCH
T ss_pred HHHHHHHHHHhCCCCEEEECCEEEEEEEcCCCeEEEEECCCcEEECCEEEECCCHHHhhhccccccccccceEecCCCCH
Confidence 999999999988 49999999999986 5679999999989999999999999998642 3678899999
Q ss_pred HHHHHHhhcCCccccEEEEEeCCCCCCCC-ccceeecCCC-------------------------------Cce---eEE
Q 024393 72 WKEAAIDDLGVGIENKIIMHFDKVFWPNV-EFLGVVSDTS-------------------------------YGC---SYF 116 (268)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~-------------------------------~~~---~~~ 116 (268)
.+.++++++.|++..|+++.|+++||++. ..+....... ..+ ..+
T Consensus 281 ~~~~ai~~~~~~~~~Kv~l~f~~~fW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (516)
T 1rsg_A 281 VIQDAFDKIHFGALGKVIFEFEECCWSNESSKIVTLANSTNEFVEIVRNAENLDELDSMLEREDSQKHTSVTCWSQPLFF 360 (516)
T ss_dssp HHHHHTTSSCCCCCEEEEEEESSCCSCCSCSEEEECCCCCHHHHHHHHHCCSHHHHHHHC---------CCCTTSSCEEE
T ss_pred HHHHHHHhCCCCcceEEEEEeCCCCCCCCCCcEEEeCCCCccchhhcccCcccchhhhcccccccccccccccccCceeE
Confidence 99999999999999999999999999654 2222222110 000 112
Q ss_pred EeccccCCccEEEEEeccchHHHHhcC--CHHHHHH---HHHHHHHHhcC------CCC---------CCc--EEEEccc
Q 024393 117 LNLHKATGHCVLVYMPAGQLARDIEKM--SDEAAAN---FAFTQLKKILP------DAS---------SPI--QYLVSHW 174 (268)
Q Consensus 117 ~~~~~~~g~~~l~~~~~~~~~~~~~~~--~~~e~~~---~i~~~l~~~~p------~~~---------~~~--~~~~~~w 174 (268)
.+...+.+.++|+.|+.++.+..+..+ +++++.+ .+++++.++|+ +.. .|. .+..++|
T Consensus 361 ~~~~~~~~~~~L~~~~~g~~a~~~~~l~~~~~~~~~~~~~~l~~l~~~~g~~~~~~~~~~~~~~~~a~~p~~~~~~~~~W 440 (516)
T 1rsg_A 361 VNLSKSTGVASFMMLMQAPLTNHIESIREDKERLFSFFQPVLNKIMKCLDSEDVIDGMRPIENIANANKPVLRNIIVSNW 440 (516)
T ss_dssp EEHHHHTSCSEEEEEECBTHHHHHHHTTTCHHHHHHHHHHHHHHHHHHTTCCCCEECCC-------CCSCEEEEEEECCT
T ss_pred EEeeecCCCcEEEEEecchHHHHHHhcCCCHHHHHHHHHHHHHHHHhhccccccccCCCCcccccccCCCccceEEEecC
Confidence 233345567788899999888888888 8888765 47777777665 221 154 7888999
Q ss_pred CCCcCCCcccCcCCCCCCh-HHHHHhc-CCCCCeeeeecccCCCCCccchhhHHHHHHHHHHHHHHHHHH
Q 024393 175 GTDANSLGSYSYDTVGKSH-DLYERLR-IPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLER 242 (268)
Q Consensus 175 ~~~~~~~g~~~~~~~~~~~-~~~~~~~-~p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i~~~l~~~ 242 (268)
.+++|+.|+|....||... .....+. .+.++|||||++++..+.|+|+||+.||.+||++|++.+...
T Consensus 441 ~~dp~~~Gsys~~~~g~~~~~~~~~l~~~~~~rl~FAGe~ts~~~~g~v~GA~~SG~raA~~i~~~~~~~ 510 (516)
T 1rsg_A 441 TRDPYSRGAYSACFPGDDPVDMVVAMSNGQDSRIRFAGEHTIMDGAGCAYGAWESGRREATRISDLLKLE 510 (516)
T ss_dssp TTCTTTTTCCCCCBC----CHHHHHHHHCSSSSEEECSTTSCSTTBTSHHHHHHHHHHHHHHHHHHHHGG
T ss_pred CCCCCCCccCCCcCCCCCHHHHHHHhccCCCCcEEEeccccccCCCccchhHHHHHHHHHHHHHHHhhhh
Confidence 9999999999988787632 3344444 477899999999998778999999999999999999887664
No 10
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=99.97 E-value=4.1e-30 Score=228.78 Aligned_cols=236 Identities=21% Similarity=0.298 Sum_probs=186.1
Q ss_pred CCCChHHHHHHHhcCC---ceeeCcceeEEEEcCCceEEEEcCC---cEEEeCEEEEecChhhhhcCcccccCCCcHHHH
Q 024393 1 MVRGYLPVINTLAKGL---DIRLGHRVTKITRHYIGVKVTVEGG---KTFVADAVVVAVPLGVLKARTIKFEPRLPDWKE 74 (268)
Q Consensus 1 ~~gG~~~l~~~l~~~l---~i~~~~~V~~I~~~~~~v~v~~~~g---~~~~ad~VI~a~p~~~l~~~~~~~~p~l~~~~~ 74 (268)
++|||+.|+++|++.+ +|++|++|++|+.++++|.|++.+| +++.||+||+|+|+..+.. +.+ ++|+...
T Consensus 234 ~~gG~~~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~~~~ad~vI~a~p~~~l~~--l~~--~l~~~~~ 309 (489)
T 2jae_A 234 PVGGMDRIYYAFQDRIGTDNIVFGAEVTSMKNVSEGVTVEYTAGGSKKSITADYAICTIPPHLVGR--LQN--NLPGDVL 309 (489)
T ss_dssp ETTCTTHHHHHHHHHHCGGGEETTCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCHHHHTT--SEE--CCCHHHH
T ss_pred ecCCHHHHHHHHHHhcCCCeEEECCEEEEEEEcCCeEEEEEecCCeEEEEECCEEEECCCHHHHHh--Ccc--CCCHHHH
Confidence 4799999999999976 4999999999999999999888776 6899999999999998864 333 6888888
Q ss_pred HHHhhcCCccccEEEEEeCCCCCCCC-ccceeecCCCCc--eeEEEeccccCCccEEE-EEeccchHHHHhcCCHHHHHH
Q 024393 75 AAIDDLGVGIENKIIMHFDKVFWPNV-EFLGVVSDTSYG--CSYFLNLHKATGHCVLV-YMPAGQLARDIEKMSDEAAAN 150 (268)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~--~~~~~~~~~~~g~~~l~-~~~~~~~~~~~~~~~~~e~~~ 150 (268)
++++++.|.+..++++.|+++||++. ..+|.+...+.+ ..++++...+...++++ .|+.++.+..|..++++++++
T Consensus 310 ~~l~~~~~~~~~kv~l~~~~~~w~~~~~~~g~~~~~~~~~~~~~~~s~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~ 389 (489)
T 2jae_A 310 TALKAAKPSSSGKLGIEYSRRWWETEDRIYGGASNTDKDISQIMFPYDHYNSDRGVVVAYYSSGKRQEAFESLTHRQRLA 389 (489)
T ss_dssp HHHHTEECCCEEEEEEEESSCHHHHTTCCCSCEEEESSTTCEEECCSSSTTSSCEEEEEEEEETHHHHHHHTSCHHHHHH
T ss_pred HHHHhCCCccceEEEEEeCCCCccCCCCcccccccCCCCceEEEeCCCCCCCCCCEEEEEeeCCchhhhhhcCCHHHHHH
Confidence 89999999999999999999999543 555543222222 22233322222234554 577788888899999999999
Q ss_pred HHHHHHHHhcCC-C-CCCcEEEEcccCCCcCCCcccCcCC------CCCChHHHHHhcCCCCCeeeeecccCCCCCccch
Q 024393 151 FAFTQLKKILPD-A-SSPIQYLVSHWGTDANSLGSYSYDT------VGKSHDLYERLRIPVDNLFFAGEATSMSYPGSVH 222 (268)
Q Consensus 151 ~i~~~l~~~~p~-~-~~~~~~~~~~w~~~~~~~g~~~~~~------~~~~~~~~~~~~~p~~~l~~aG~~~~~~~~g~~~ 222 (268)
.++++|++++|. . ..+.....++|.+++|+.|+|.... ++.....++.+++|.+||||||++++. ++++++
T Consensus 390 ~~l~~L~~~~~~~~~~~~~~~~~~~W~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~faG~~~~~-~~~~v~ 468 (489)
T 2jae_A 390 KAIAEGSEIHGEKYTRDISSSFSGSWRRTKYSESAWANWAGSGGSHGGAATPEYEKLLEPVDKIYFAGDHLSN-AIAWQH 468 (489)
T ss_dssp HHHHHHHHHHCGGGGSSEEEEEEEEGGGSTTTSCSSCEETTC-------CCHHHHHHTSCBTTEEECSGGGBS-STTSHH
T ss_pred HHHHHHHHHcCcchhhhccccEEEEcCCCCCCCCcchhcccccCCCcccchhhHHHHhCCCCcEEEeEHHhcc-CccHHH
Confidence 999999999986 3 4566777889999999999987655 665555677788899999999999864 468999
Q ss_pred hhHHHHHHHHHHHHHHHHH
Q 024393 223 GAFSTGLMAAEDCRMRVLE 241 (268)
Q Consensus 223 gA~~Sg~~aa~~i~~~l~~ 241 (268)
||+.||.++|+.|+..+++
T Consensus 469 gAi~sg~~aA~~i~~~l~~ 487 (489)
T 2jae_A 469 GALTSARDVVTHIHERVAQ 487 (489)
T ss_dssp HHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHhh
Confidence 9999999999999987764
No 11
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.96 E-value=2.4e-27 Score=201.66 Aligned_cols=224 Identities=17% Similarity=0.213 Sum_probs=176.7
Q ss_pred CCChHHHHHHHhc--CCceeeCcceeEEEEcCCceEEEEcCCcEEEeCEEEEecChhhhhcCcccccCCCcHHHHHHHhh
Q 024393 2 VRGYLPVINTLAK--GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDD 79 (268)
Q Consensus 2 ~gG~~~l~~~l~~--~l~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~l~~~~~~~~p~l~~~~~~~~~~ 79 (268)
.+||+.+.++|++ +++|+++++|++|+.++++|.|++.+|+++.||.||+|+|++++.++...+.|.||+...+.+++
T Consensus 108 ~~g~~~l~~~l~~~~g~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vV~A~p~~~~~~ll~~~~~~l~~~~~~~l~~ 187 (342)
T 3qj4_A 108 PQGISSIIKHYLKESGAEVYFRHRVTQINLRDDKWEVSKQTGSPEQFDLIVLTMPVPEILQLQGDITTLISECQRQQLEA 187 (342)
T ss_dssp TTCTTHHHHHHHHHHTCEEESSCCEEEEEECSSSEEEEESSSCCEEESEEEECSCHHHHTTCBSTHHHHSCHHHHHHHHT
T ss_pred CCCHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCHHHHHHHhcccccccCHHHHHHHhc
Confidence 6899999999998 77999999999999998899999988877899999999999998765333455678788889999
Q ss_pred cCCccccEEEEEeCCCCCCCCccceeecCCCCceeEE-EeccccC-----CccEEEEEeccchHHHHhcCCHHHHHHHHH
Q 024393 80 LGVGIENKIIMHFDKVFWPNVEFLGVVSDTSYGCSYF-LNLHKAT-----GHCVLVYMPAGQLARDIEKMSDEAAANFAF 153 (268)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~-----g~~~l~~~~~~~~~~~~~~~~~~e~~~~i~ 153 (268)
+.|.++.++++.|++++|.+.+..|.+.+......+. .+..+++ +...+++++.+.++..+.+++++++.+.++
T Consensus 188 ~~~~~~~~v~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~k~~r~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 267 (342)
T 3qj4_A 188 VSYSSRYALGLFYEAGTKIDVPWAGQYITSNPCIRFVSIDNKKRNIESSEIGPSLVIHTTVPFGVTYLEHSIEDVQELVF 267 (342)
T ss_dssp CCBCCEEEEEEECSSCC--CCSCSEEECSSCSSEEEEEEHHHHTTCCCC-CCCEEEEEECHHHHHHTTTSCHHHHHHHHH
T ss_pred CCccccEEEEEEECCCCccCCceeeEEccCCcceEEEEccccCCCCCCCCCCceEEEECCHHHHHHhhcCCHHHHHHHHH
Confidence 9999999999999999887777788876544434443 3333332 234677788888888889999999999999
Q ss_pred HHHHHhcCCCCCCcEEEEcccCCCcCCCcccCcC-CCCCChHHHHHhc-CCCCCeeeeecccCCCCCccchhhHHHHHHH
Q 024393 154 TQLKKILPDASSPIQYLVSHWGTDANSLGSYSYD-TVGKSHDLYERLR-IPVDNLFFAGEATSMSYPGSVHGAFSTGLMA 231 (268)
Q Consensus 154 ~~l~~~~p~~~~~~~~~~~~w~~~~~~~g~~~~~-~~~~~~~~~~~~~-~p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~a 231 (268)
++|++++|...+|..+.+++|.. +...|... .++. +. .+.++|++||||+.+ +++|+|+.||..+
T Consensus 268 ~~l~~~~g~~~~p~~~~v~rW~~---a~p~~~~~~~~~~-------~~~~~~~~l~laGd~~~g---~~v~~ai~sg~~a 334 (342)
T 3qj4_A 268 QQLENILPGLPQPIATKCQKWRH---SQVTNAAANCPGQ-------MTLHHKPFLACGGDGFTQ---SNFDGCITSALCV 334 (342)
T ss_dssp HHHHHHSCSCCCCSEEEEEEETT---CSBSSCCSSSCSC-------EEEETTTEEEECSGGGSC---SSHHHHHHHHHHH
T ss_pred HHHHHhccCCCCCceeeeccccc---cccccccCCCcce-------eEecCCccEEEEccccCC---CCccHHHHHHHHH
Confidence 99999999767899999999954 33333220 1211 12 356799999999975 6999999999999
Q ss_pred HHHHHHH
Q 024393 232 AEDCRMR 238 (268)
Q Consensus 232 a~~i~~~ 238 (268)
|+.|+..
T Consensus 335 a~~i~~~ 341 (342)
T 3qj4_A 335 LEALKNY 341 (342)
T ss_dssp HHHHTTC
T ss_pred HHHHHhh
Confidence 9998753
No 12
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.96 E-value=2.7e-27 Score=207.35 Aligned_cols=222 Identities=22% Similarity=0.304 Sum_probs=177.3
Q ss_pred CCChHHHHHHHhcCC-ceeeCcceeEEEEcCCceEEEEcCCcEEEeCEEEEecChhhhhcCcccccCCCcHHHHHHHhhc
Q 024393 2 VRGYLPVINTLAKGL-DIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDDL 80 (268)
Q Consensus 2 ~gG~~~l~~~l~~~l-~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~l~~~~~~~~p~l~~~~~~~~~~~ 80 (268)
.+|++.+++++++.+ +|++|++|++|+.+++++.|++.+|++++||+||+|+|++.+. .+.+.|+++....++++..
T Consensus 203 ~~g~~~l~~~~~~~~g~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vi~a~~~~~l~--~i~~~p~l~~~~~~~~~~~ 280 (431)
T 3k7m_X 203 SNGSADLVDAMSQEIPEIRLQTVVTGIDQSGDVVNVTVKDGHAFQAHSVIVATPMNTWR--RIVFTPALPERRRSVIEEG 280 (431)
T ss_dssp TTCTHHHHHHHHTTCSCEESSCCEEEEECSSSSEEEEETTSCCEEEEEEEECSCGGGGG--GSEEESCCCHHHHHHHHHC
T ss_pred CCcHHHHHHHHHhhCCceEeCCEEEEEEEcCCeEEEEECCCCEEEeCEEEEecCcchHh--heeeCCCCCHHHHHHHHhC
Confidence 689999999998866 8999999999999888899999999889999999999999987 4568899999988899999
Q ss_pred CCccccEEEEEeCCCCCCCCccceeecCCCCceeEEEeccccCCccEEEEEeccchHHHHhcCCHHHHHHHHHHHHHHhc
Q 024393 81 GVGIENKIIMHFDKVFWPNVEFLGVVSDTSYGCSYFLNLHKATGHCVLVYMPAGQLARDIEKMSDEAAANFAFTQLKKIL 160 (268)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~e~~~~i~~~l~~~~ 160 (268)
.+....|+.+.|+++++ ++++ .........+.......+..+++.+..++. +...+. +.+.+.|++++
T Consensus 281 ~~~~~~kv~~~~~~~~~---~i~~--~~d~~~~~~~~~~~~~~~~~~l~~~~~g~~---~~~~~~----~~~~~~l~~~~ 348 (431)
T 3k7m_X 281 HGGQGLKILIHVRGAEA---GIEC--VGDGIFPTLYDYCEVSESERLLVAFTDSGS---FDPTDI----GAVKDAVLYYL 348 (431)
T ss_dssp CCCCEEEEEEEEESCCT---TEEE--EBSSSSSEEEEEEECSSSEEEEEEEEETTT---CCTTCH----HHHHHHHHHHC
T ss_pred CCcceEEEEEEECCCCc---CceE--cCCCCEEEEEeCcCCCCCCeEEEEEecccc---CCCCCH----HHHHHHHHHhc
Confidence 89889999999999874 2333 111111222332222245557777766554 322333 24667888889
Q ss_pred CCCCCCcEEEEcccCCCcCCCcccCcCCCCCChHHHHHhcCCCCCeeeeecccCCCCCccchhhHHHHHHHHHHHHHH
Q 024393 161 PDASSPIQYLVSHWGTDANSLGSYSYDTVGKSHDLYERLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMR 238 (268)
Q Consensus 161 p~~~~~~~~~~~~w~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i~~~ 238 (268)
|+.. +..+..++|..++|+.|+|..+.||+....++.+++|.++|||||+.++..+.|+|+||+.||.+||++|+..
T Consensus 349 ~~~~-~~~~~~~~W~~d~~~~G~~~~~~~g~~~~~~~~l~~p~g~~~fAGe~t~~~~~g~~~GA~~sg~raa~~i~~~ 425 (431)
T 3k7m_X 349 PEVE-VLGIDYHDWIADPLFEGPWVAPRVGQFSRVHKELGEPAGRIHFVGSDVSLEFPGYIEGALETAECAVNAILHS 425 (431)
T ss_dssp TTCE-EEEEECCCTTTCTTTSSSSCCCCTTTTTTSSGGGGSCBTTEEECSGGGCSSSTTSHHHHHHHHHHHHHHHHHC
T ss_pred CCCC-ccEeEecccCCCCCCCCCCCCcCCCCCcccHHHHhCCCCcEEEEehhhhccCCeEehHHHHHHHHHHHHHHhh
Confidence 8743 7788889999999999999988888866667888999999999999999878899999999999999999863
No 13
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=99.94 E-value=5e-27 Score=213.78 Aligned_cols=239 Identities=19% Similarity=0.210 Sum_probs=175.8
Q ss_pred CCCChHHHHHHHhcCC----ceeeCccee--EEEEcCCc-------eEEE-EcCCc--EEEeCEEEEecChhhhhc----
Q 024393 1 MVRGYLPVINTLAKGL----DIRLGHRVT--KITRHYIG-------VKVT-VEGGK--TFVADAVVVAVPLGVLKA---- 60 (268)
Q Consensus 1 ~~gG~~~l~~~l~~~l----~i~~~~~V~--~I~~~~~~-------v~v~-~~~g~--~~~ad~VI~a~p~~~l~~---- 60 (268)
+.|||+.|+++|++.+ .|+++++|+ +|..++++ |.|. +.+|+ +++||+||+|+|+..+..
T Consensus 342 i~GG~~~L~~aLa~~l~~g~~I~l~~~V~~~~I~~~~~g~~~~~~~V~V~~~~~G~~~~~~aD~VIvTvP~~~L~~~~~r 421 (721)
T 3ayj_A 342 PVTENVEFIRNLFLKAQNVGAGKLVVQVRQERVANACHSGTASARAQLLSYDSHNAVHSEAYDFVILAVPHDQLTPIVSR 421 (721)
T ss_dssp SSSSTHHHHHHHHHHHHHHTTTSEEEEEECEEEEEEEECSSSSCCEEEEEEETTCCEEEEEESEEEECSCHHHHHHHHSS
T ss_pred ECCcHHHHHHHHHHhcccCCceEeCCEEEeeeEEECCCCCccccceEEEEEecCCceEEEEcCEEEECCCHHHHhhcccc
Confidence 5799999999999876 499999999 99987544 8884 45676 789999999999999842
Q ss_pred Cccc----------------------ccCCC-c-------HHHHHHHhhcCCccccEEEEEe-----CCCCCCCC-c-cc
Q 024393 61 RTIK----------------------FEPRL-P-------DWKEAAIDDLGVGIENKIIMHF-----DKVFWPNV-E-FL 103 (268)
Q Consensus 61 ~~~~----------------------~~p~l-~-------~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~-~-~~ 103 (268)
..+. +.|.| | ..++++++++.|.+..|+++.| +++||+.. + ..
T Consensus 422 ~~i~~~~~~~~~~~~~~~~~~~~~~~~pplLlp~~~~~~~~~~~~Ai~~l~~~~s~Kv~l~~~~~~~~~~fW~~~~g~~i 501 (721)
T 3ayj_A 422 SGFEHAASQNLGDAGLGLETHTYNQVYPPLLLSDSSPAANARIVTAIGQLHMARSSKVFATVKTAALDQPWVPQWRGEPI 501 (721)
T ss_dssp SCSSCEEEEEESCGGGTCCCEEEEEEBCSSCCCSSCHHHHHHHHHHHHTCCEECEEEEEEEEEGGGGGSTTSCEETTEEC
T ss_pred ccccccccccccccccccccccccccCCcccCCcccccccHHHHHHHHhcCcccceEEEEEEccccCCCCcccccCCCCc
Confidence 1233 23435 8 7888999999999999999999 99999654 1 12
Q ss_pred eee-cCCCCceeEE-E--e--ccccCCcc-EEEEEeccchHHHH------hcCCHHHH-------HHHHHHHHH--HhcC
Q 024393 104 GVV-SDTSYGCSYF-L--N--LHKATGHC-VLVYMPAGQLARDI------EKMSDEAA-------ANFAFTQLK--KILP 161 (268)
Q Consensus 104 g~~-~~~~~~~~~~-~--~--~~~~~g~~-~l~~~~~~~~~~~~------~~~~~~e~-------~~~i~~~l~--~~~p 161 (268)
+.. .+.+....++ + + ...+.+.+ +|..|.+++.+..| ..+++++. .+.++++|+ +++|
T Consensus 502 ~~s~TD~~~r~~~~~p~p~~~d~~~~~~gvlL~sYtwg~dA~~~~~~~g~~~~~~~er~~~~~~~~~~~l~~la~~~~~p 581 (721)
T 3ayj_A 502 KAVVSDSGLAASYVVPSPIVEDGQAPEYSSLLASYTWEDDSTRLRHDFGLYPQNPATETGTADGMYRTMVNRAYRYVKYA 581 (721)
T ss_dssp CEEEETTTTEEEEEEECSCC----CCSEEEEEEEEEETHHHHHHHTTCCSSSEESSSSSCCCHHHHHHHHHHTCCEECCT
T ss_pred eeeecCCCcceEEEeccCcccccCCCCCcEEEEEEeCccchhhhhccccccCCChHHhhhhhhHHHHHHHHHHhhhccCc
Confidence 222 2222222332 2 1 11233444 55678899888888 55555555 999999999 8898
Q ss_pred CCC--------------CCcEEEEcccCCCcCCCcccCcCCCCCChH---HHHH-----hcCCCCCeeeeecccCCCCCc
Q 024393 162 DAS--------------SPIQYLVSHWGTDANSLGSYSYDTVGKSHD---LYER-----LRIPVDNLFFAGEATSMSYPG 219 (268)
Q Consensus 162 ~~~--------------~~~~~~~~~w~~~~~~~g~~~~~~~~~~~~---~~~~-----~~~p~~~l~~aG~~~~~~~~g 219 (268)
+.. .+.++..++|.+++ +.|+|..+.||+... +.+. +..|.++|||||++++. +.|
T Consensus 582 ~~~~~~~~~~~~l~~~~~~~~~~~~dW~~dp-s~Gaf~~~~pgq~~~~~l~~~~~~~~~~~~~~gri~fAGe~~S~-~~G 659 (721)
T 3ayj_A 582 GASNAQPWWFYQLLAEARTADRFVFDWTTNK-TAGGFKLDMTGDHHQSNLCFRYHTHALAASLDNRFFIASDSYSH-LGG 659 (721)
T ss_dssp TCSSCEECHHHHHHHTSCSTTCEEEEGGGST-TSSSEECCBTTTHHHHHHHHHGGGGGGCTTTCCCEEECSGGGSS-CTT
T ss_pred cccccccchhhhhhhhcccCceEEEeCCCCC-CCCccccCCCccchhhhhhhhhhhhccccCCCCCEEEeehhhcc-CCc
Confidence 633 13456788999999 999999888988321 1121 23457899999999985 578
Q ss_pred cchhhHHHHHHHHHHHHHHHHH
Q 024393 220 SVHGAFSTGLMAAEDCRMRVLE 241 (268)
Q Consensus 220 ~~~gA~~Sg~~aa~~i~~~l~~ 241 (268)
|+|||++||.+||..|+..+..
T Consensus 660 WieGAl~Sa~~Aa~~i~~~~~~ 681 (721)
T 3ayj_A 660 WLEGAFMSALNAVAGLIVRANR 681 (721)
T ss_dssp SHHHHHHHHHHHHHHHHHHHTT
T ss_pred eehHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999886654
No 14
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.94 E-value=1.3e-25 Score=198.45 Aligned_cols=223 Identities=18% Similarity=0.221 Sum_probs=171.5
Q ss_pred CCChHHHHHHHhcCC---ceeeCcceeEEEEcCCceEEEEcCCcEEEeCEEEEecChhhhhcCcccccCCCcHHHHHHHh
Q 024393 2 VRGYLPVINTLAKGL---DIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAID 78 (268)
Q Consensus 2 ~gG~~~l~~~l~~~l---~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~l~~~~~~~~p~l~~~~~~~~~ 78 (268)
+||++.|+++|++.+ +|+++++|++|+.+++++.|++.+|+++.||+||+|+|++.+.++ ...+++ .++++
T Consensus 231 ~~g~~~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vi~a~p~~~~~~l--~~~~~~----~~~~~ 304 (470)
T 3i6d_A 231 STGLQTLVEEIEKQLKLTKVYKGTKVTKLSHSGSCYSLELDNGVTLDADSVIVTAPHKAAAGM--LSELPA----ISHLK 304 (470)
T ss_dssp TTCTHHHHHHHHHTCCSEEEECSCCEEEEEECSSSEEEEESSSCEEEESEEEECSCHHHHHHH--TTTSTT----HHHHH
T ss_pred CChHHHHHHHHHHhcCCCEEEeCCceEEEEEcCCeEEEEECCCCEEECCEEEECCCHHHHHHH--cCCchh----hHHHh
Confidence 689999999999988 699999999999998899999999989999999999999998753 223322 46778
Q ss_pred hcCCccccEEEEEeCCCCCCC-CccceeecCCCCce----eEEE----eccccCCccEEEEEeccchHHHHhcCCHHHHH
Q 024393 79 DLGVGIENKIIMHFDKVFWPN-VEFLGVVSDTSYGC----SYFL----NLHKATGHCVLVYMPAGQLARDIEKMSDEAAA 149 (268)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~----~~~~----~~~~~~g~~~l~~~~~~~~~~~~~~~~~~e~~ 149 (268)
++.|.++.++++.|++++|+. ...+|.+.+..... ..++ ....|++..++.+++.+..+..+..+++++++
T Consensus 305 ~~~~~~~~~v~l~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~s~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~ 384 (470)
T 3i6d_A 305 NMHSTSVANVALGFPEGSVQMEHEGTGFVISRNSDFAITACTWTNKKWPHAAPEGKTLLRAYVGKAGDESIVDLSDNDII 384 (470)
T ss_dssp TCEEEEEEEEEEEESSTTCCCSSCSSEEEECSTTCCSEEEEEEHHHHCGGGSCTTCEEEEEEECCSSCCGGGTSCHHHHH
T ss_pred cCCCCceEEEEEEECchhcCCCCCCeEEEccCCCCCCceEEEEEcCcCCCcCCCCCEEEEEEECCCCCccccCCCHHHHH
Confidence 899999999999999999954 34556665432221 1111 22346677677777766666667889999999
Q ss_pred HHHHHHHHHhcCCCCCCcEEEEcccCCCcCCCcccCcCCCCCC---hHHHHHhcCCCCCeeeeecccCCCCCccchhhHH
Q 024393 150 NFAFTQLKKILPDASSPIQYLVSHWGTDANSLGSYSYDTVGKS---HDLYERLRIPVDNLFFAGEATSMSYPGSVHGAFS 226 (268)
Q Consensus 150 ~~i~~~l~~~~p~~~~~~~~~~~~w~~~~~~~g~~~~~~~~~~---~~~~~~~~~p~~~l~~aG~~~~~~~~g~~~gA~~ 226 (268)
+.++++|+++||...+|..+.+++|.+. +..+.+|.. ...++.+.++.+||||||+++.. .++++|+.
T Consensus 385 ~~~~~~l~~~~g~~~~p~~~~~~~w~~a------~p~~~~g~~~~~~~~~~~l~~~~~~l~~aG~~~~g---~gv~~a~~ 455 (470)
T 3i6d_A 385 NIVLEDLKKVMNINGEPEMTCVTRWHES------MPQYHVGHKQRIKELREALASAYPGVYMTGASFEG---VGIPDCID 455 (470)
T ss_dssp HHHHHHHGGGSCCCSCCSEEEEEEEEEE------EEECBTTHHHHHHHHHHHHHHHSTTEEECSTTTSC---CSHHHHHH
T ss_pred HHHHHHHHHHhCCCCCceEEEEEEcCCc------cCCCCCCHHHHHHHHHHHHHhhCCCEEEEeecCCC---CCHHHHHH
Confidence 9999999999997667888899999543 112233332 12334566678899999999864 46999999
Q ss_pred HHHHHHHHHHHHH
Q 024393 227 TGLMAAEDCRMRV 239 (268)
Q Consensus 227 Sg~~aa~~i~~~l 239 (268)
||.++|+.|++.|
T Consensus 456 sG~~aA~~i~~~l 468 (470)
T 3i6d_A 456 QGKAAVSDALTYL 468 (470)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998765
No 15
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.92 E-value=1.7e-24 Score=191.99 Aligned_cols=227 Identities=17% Similarity=0.183 Sum_probs=166.5
Q ss_pred CCCChHHHHHHHhcCC--ceeeCcceeEEEEcCCceEEEE---cCCcEEEeCEEEEecChhhhhcCcccccCCCcHHHHH
Q 024393 1 MVRGYLPVINTLAKGL--DIRLGHRVTKITRHYIGVKVTV---EGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEA 75 (268)
Q Consensus 1 ~~gG~~~l~~~l~~~l--~i~~~~~V~~I~~~~~~v~v~~---~~g~~~~ad~VI~a~p~~~l~~~~~~~~p~l~~~~~~ 75 (268)
++|||+.|+++|++.+ +|+++++|++|+.+++++.|++ .+|+++.||+||+|+|+..+..+ .|++++...+
T Consensus 233 ~~gG~~~l~~~l~~~lg~~i~~~~~V~~i~~~~~~~~v~~~~~~~g~~~~ad~vV~a~~~~~~~~l----l~~l~~~~~~ 308 (478)
T 2ivd_A 233 FDGGLQVLIDALAASLGDAAHVGARVEGLAREDGGWRLIIEEHGRRAELSVAQVVLAAPAHATAKL----LRPLDDALAA 308 (478)
T ss_dssp ETTCTHHHHHHHHHHHGGGEESSEEEEEEECC--CCEEEEEETTEEEEEECSEEEECSCHHHHHHH----HTTTCHHHHH
T ss_pred ECCCHHHHHHHHHHHhhhhEEcCCEEEEEEecCCeEEEEEeecCCCceEEcCEEEECCCHHHHHHH----hhccCHHHHH
Confidence 3689999999999977 8999999999999888888887 67788999999999999987642 2668888888
Q ss_pred HHhhcCCccccEEEEEeCCCCCCCCccceeecCC--CCc--eeEEEec----cccCCccEEEEEeccchHHHHhcCCHHH
Q 024393 76 AIDDLGVGIENKIIMHFDKVFWPNVEFLGVVSDT--SYG--CSYFLNL----HKATGHCVLVYMPAGQLARDIEKMSDEA 147 (268)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~--~~~~~~~----~~~~g~~~l~~~~~~~~~~~~~~~~~~e 147 (268)
+++++.+.+..++++.|++++|.....++.+.+. +.. ...+++. ..|++..++++++.+..+..+.++++++
T Consensus 309 ~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~g~~~l~~~~~~~~~~~~~~~~~~~ 388 (478)
T 2ivd_A 309 LVAGIAYAPIAVVHLGFDAGTLPAPDGFGFLVPAEEQRRMLGAIHASTTFPFRAEGGRVLYSCMVGGARQPGLVEQDEDA 388 (478)
T ss_dssp HHHTCCBCCEEEEEEEECTTSSCCCCSSEEECCGGGCCSCCEEEEHHHHCGGGBSTTCEEEEEEEECTTCGGGGGSCHHH
T ss_pred HHhcCCCCcEEEEEEEEccccCCCCCceEEEecCCCCCceEEEEEEcccCCCcCCCCCEEEEEEeCCcCCccccCCCHHH
Confidence 8999999999999999999998652334544321 111 1223221 1355666777777776666677889999
Q ss_pred HHHHHHHHHHHhcCCCCCCcEEEEcccCCCcCCCcccCcCCCCCChH---HHHHhcCCCCCeeeeecccCCCCCccchhh
Q 024393 148 AANFAFTQLKKILPDASSPIQYLVSHWGTDANSLGSYSYDTVGKSHD---LYERLRIPVDNLFFAGEATSMSYPGSVHGA 224 (268)
Q Consensus 148 ~~~~i~~~l~~~~p~~~~~~~~~~~~w~~~~~~~g~~~~~~~~~~~~---~~~~~~~p~~~l~~aG~~~~~~~~g~~~gA 224 (268)
+.+.++++|.+++|....|..+..++|... ++.+.++.... ..+...+ .+||||||+++. +++++||
T Consensus 389 ~~~~~~~~l~~~~~~~~~p~~~~~~~w~~~------~p~~~~g~~~~~~~~~~~~~~-~~~l~~aG~~~~---g~gv~gA 458 (478)
T 2ivd_A 389 LAALAREELKALAGVTARPSFTRVFRWPLG------IPQYNLGHLERVAAIDAALQR-LPGLHLIGNAYK---GVGLNDC 458 (478)
T ss_dssp HHHHHHHHHHHHHCCCSCCSEEEEEEESSC------CBCCBTTHHHHHHHHHHHHHT-STTEEECSTTTS---CCSHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEECCCc------ccCCCcCHHHHHHHHHHHHhh-CCCEEEEccCCC---CCCHHHH
Confidence 999999999999997557788788899553 22223443211 1222333 689999999984 2479999
Q ss_pred HHHHHHHHHHHHHHHHH
Q 024393 225 FSTGLMAAEDCRMRVLE 241 (268)
Q Consensus 225 ~~Sg~~aa~~i~~~l~~ 241 (268)
+.||+++|+.|+..+..
T Consensus 459 ~~SG~~aA~~i~~~l~~ 475 (478)
T 2ivd_A 459 IRNAAQLADALVAGNTS 475 (478)
T ss_dssp HHHHHHHHHHHCC----
T ss_pred HHHHHHHHHHHHHhhcc
Confidence 99999999999876543
No 16
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.92 E-value=1.4e-24 Score=192.51 Aligned_cols=220 Identities=19% Similarity=0.204 Sum_probs=166.5
Q ss_pred CCChHHHHHHHhcCC---ceeeCcceeEEEEcCCceEEEEcCCcEEEeCEEEEecChhhhhcCcccccCCCcHHHHHHHh
Q 024393 2 VRGYLPVINTLAKGL---DIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAID 78 (268)
Q Consensus 2 ~gG~~~l~~~l~~~l---~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~l~~~~~~~~p~l~~~~~~~~~ 78 (268)
+|||+.|+++|++.+ +|+++++|++|+.++++|.|++.+| ++.||+||+|+|++.+.++ ...+++ +.++
T Consensus 232 ~~G~~~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~ad~vV~a~p~~~~~~l--l~~~~~-----~~~~ 303 (475)
T 3lov_A 232 ETGLESLIERLEEVLERSEIRLETPLLAISREDGRYRLKTDHG-PEYADYVLLTIPHPQVVQL--LPDAHL-----PELE 303 (475)
T ss_dssp TTCHHHHHHHHHHHCSSCEEESSCCCCEEEEETTEEEEECTTC-CEEESEEEECSCHHHHHHH--CTTSCC-----HHHH
T ss_pred CChHHHHHHHHHhhccCCEEEcCCeeeEEEEeCCEEEEEECCC-eEECCEEEECCCHHHHHHH--cCccCH-----HHHh
Confidence 689999999999987 7999999999999998999999888 8999999999999998753 223333 5678
Q ss_pred hcCCccccEEEEEeCCCCCCCCccceeecCCCCce---e-EEEe----ccccCCccEEEEEeccchHHHHhcCCHHHHHH
Q 024393 79 DLGVGIENKIIMHFDKVFWPNVEFLGVVSDTSYGC---S-YFLN----LHKATGHCVLVYMPAGQLARDIEKMSDEAAAN 150 (268)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~---~-~~~~----~~~~~g~~~l~~~~~~~~~~~~~~~~~~e~~~ 150 (268)
++.|.++.++++.|+++++.+.+.+|.+.+..... . .+.+ ...|+ ..++..++.+..+..+.+++++++++
T Consensus 304 ~~~~~~~~~v~l~~~~~~~~~~~g~g~l~~~~~~~~~~~~~~~s~~~~~~~p~-~~~l~~~~~~~~~~~~~~~~~e~~~~ 382 (475)
T 3lov_A 304 QLTTHSTATVTMIFDQQQSLPIEGTGFVVNRRAPYSITACTAIDQKWNHSAPD-HTVLRAFVGRPGNDHLVHESDEVLQQ 382 (475)
T ss_dssp TCCEEEEEEEEEEEECCSSCSSSSSEEEECTTSSCSEEEEEEHHHHCTTTCTT-EEEEEEEECBTTBCGGGGSCHHHHHH
T ss_pred cCCCCeEEEEEEEECCcCCCCCCCEEEEecCCCCCceEEEEEEcccCCCCCCC-cEEEEEEeCCCCCCcccCCCHHHHHH
Confidence 89999999999999998854444566665433221 1 1211 12344 45666777666556677899999999
Q ss_pred HHHHHHHHhcCCCCCCcEEEEcccCCCcCCCcccCcCCCCCC---hHHHHHhcCCCCCeeeeecccCCCCCccchhhHHH
Q 024393 151 FAFTQLKKILPDASSPIQYLVSHWGTDANSLGSYSYDTVGKS---HDLYERLRIPVDNLFFAGEATSMSYPGSVHGAFST 227 (268)
Q Consensus 151 ~i~~~l~~~~p~~~~~~~~~~~~w~~~~~~~g~~~~~~~~~~---~~~~~~~~~p~~~l~~aG~~~~~~~~g~~~gA~~S 227 (268)
.++++|+++||...+|..+.+++|.++. +.+.+|.. ...++.+.++.+||||||+++.. .+|++|+.|
T Consensus 383 ~~~~~L~~~~g~~~~p~~~~v~~w~~a~------p~~~~g~~~~~~~~~~~l~~~~~~l~~aG~~~~g---~g~~~a~~s 453 (475)
T 3lov_A 383 AVLQDLEKICGRTLEPKQVIISRLMDGL------PAYTVGHADRIQRVREEVLAQYPGIYLAGLAYDG---VGLPDCVAS 453 (475)
T ss_dssp HHHHHHHHHHSSCCCCSEEEEEEEEEEE------ECCCTTHHHHHHHHHHHHHHHSTTEEECSTTTSC---SSHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCeEEEEEEcccCC------CCCCCChHHHHHHHHHHHHhhCCCEEEEccCCCC---CCHHHHHHH
Confidence 9999999999975678888999996641 11233332 12334556678899999999874 479999999
Q ss_pred HHHHHHHHHHHH
Q 024393 228 GLMAAEDCRMRV 239 (268)
Q Consensus 228 g~~aa~~i~~~l 239 (268)
|.++|+.|+..+
T Consensus 454 G~~aA~~i~~~l 465 (475)
T 3lov_A 454 AKTMIESIELEQ 465 (475)
T ss_dssp HHHHHHHHHHTC
T ss_pred HHHHHHHHHHHh
Confidence 999999998754
No 17
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=99.90 E-value=2.4e-23 Score=185.74 Aligned_cols=228 Identities=18% Similarity=0.205 Sum_probs=163.3
Q ss_pred CCCChHHHHHHHhcCC---ceeeCcceeEEEEcCCc------eEEEEc--CC---cEEEeCEEEEecChhhhhcCccc-c
Q 024393 1 MVRGYLPVINTLAKGL---DIRLGHRVTKITRHYIG------VKVTVE--GG---KTFVADAVVVAVPLGVLKARTIK-F 65 (268)
Q Consensus 1 ~~gG~~~l~~~l~~~l---~i~~~~~V~~I~~~~~~------v~v~~~--~g---~~~~ad~VI~a~p~~~l~~~~~~-~ 65 (268)
++|||++|+++|++.+ +|++|++|++|..++++ +.|++. +| +++.||+||+|+|++.+.++... .
T Consensus 238 ~~GG~~~l~~~l~~~l~~~~i~~~~~V~~I~~~~~~~~~~~~~~v~~~~~~g~~~~~~~ad~VI~a~p~~~l~~ll~~~~ 317 (504)
T 1sez_A 238 FLGGMQTLTDAICKDLREDELRLNSRVLELSCSCTEDSAIDSWSIISASPHKRQSEEESFDAVIMTAPLCDVKSMKIAKR 317 (504)
T ss_dssp ETTCTHHHHHHHHTTSCTTTEETTCCEEEEEEECSSSSSSCEEEEEEBCSSSSCBCCCEESEEEECSCHHHHHTSEEESS
T ss_pred eCcHHHHHHHHHHhhcccceEEcCCeEEEEEecCCCCcccceEEEEEcCCCCccceeEECCEEEECCCHHHHHHHhhccc
Confidence 3699999999999976 59999999999988777 677664 45 57899999999999998764310 0
Q ss_pred cCCCcHHHHHHHhhcCCccccEEEEEeCCCCCCC-CccceeecCCCC------cee-EEE----eccccCCccEEEEEec
Q 024393 66 EPRLPDWKEAAIDDLGVGIENKIIMHFDKVFWPN-VEFLGVVSDTSY------GCS-YFL----NLHKATGHCVLVYMPA 133 (268)
Q Consensus 66 ~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~------~~~-~~~----~~~~~~g~~~l~~~~~ 133 (268)
.+++++. .+.++.+.+..++++.|++++|.. .+.++.+.+... ... .+. ....|+|..++++|+.
T Consensus 318 ~~~~~~~---~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~s~~~~~~~p~g~~~l~~~~~ 394 (504)
T 1sez_A 318 GNPFLLN---FIPEVDYVPLSVVITTFKRENVKYPLEGFGVLVPSKEQQHGLKTLGTLFSSMMFPDRAPNNVYLYTTFVG 394 (504)
T ss_dssp SSBCCCT---TSCCCCEEEEEEEEEEEEGGGBSSCCCSSEEECCGGGGGGTCCSSEEEEHHHHCGGGSCTTEEEEEEEEE
T ss_pred CCcccHH---HHhcCCCCceEEEEEEEchhhcCCCCCceEEEcCCCCCCCCCccceEEeeccccCCcCCCCCEEEEEEeC
Confidence 1223332 256677888999999999999853 233454433211 111 111 1224667767778887
Q ss_pred cchHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCcEEEEcccCCCcCCCcccCcCCCCCChHH--HHHhcCCCCCeeeeec
Q 024393 134 GQLARDIEKMSDEAAANFAFTQLKKILPDASSPIQYLVSHWGTDANSLGSYSYDTVGKSHDL--YERLRIPVDNLFFAGE 211 (268)
Q Consensus 134 ~~~~~~~~~~~~~e~~~~i~~~l~~~~p~~~~~~~~~~~~w~~~~~~~g~~~~~~~~~~~~~--~~~~~~p~~~l~~aG~ 211 (268)
+..+..|..++++++++.++++|++++|...+|..+.+.+|.++ ++.+.+++.... .....+|++||||||+
T Consensus 395 g~~~~~~~~~~~ee~~~~v~~~L~~~~g~~~~p~~~~~~~w~~~------~p~~~~g~~~~~~~~~~~~~~~~~l~~aG~ 468 (504)
T 1sez_A 395 GSRNRELAKASRTELKEIVTSDLKQLLGAEGEPTYVNHLYWSKA------FPLYGHNYDSVLDAIDKMEKNLPGLFYAGN 468 (504)
T ss_dssp STTCGGGTTCCHHHHHHHHHHHHHHHHCBCSCCSSEEEEEEEEE------EECCCTTHHHHHHHHHHHHHHSTTEEECCS
T ss_pred CCCcccccCCCHHHHHHHHHHHHHHHhCCCCCCeEEEEeECCCC------CCccCcCHHHHHHHHHHHHHhCCCEEEEee
Confidence 77666788899999999999999999987556888888999653 222223321111 1234457889999999
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHHHHH
Q 024393 212 ATSMSYPGSVHGAFSTGLMAAEDCRMRVL 240 (268)
Q Consensus 212 ~~~~~~~g~~~gA~~Sg~~aa~~i~~~l~ 240 (268)
++++ +++++|+.||.+||+.|++.+.
T Consensus 469 ~~~g---~~v~gai~sG~~aA~~il~~l~ 494 (504)
T 1sez_A 469 HRGG---LSVGKALSSGCNAADLVISYLE 494 (504)
T ss_dssp SSSC---SSHHHHHHHHHHHHHHHHHHHS
T ss_pred cCCC---CCHHHHHHHHHHHHHHHHHHHh
Confidence 9863 5899999999999999998764
No 18
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.89 E-value=2.6e-22 Score=177.88 Aligned_cols=221 Identities=18% Similarity=0.135 Sum_probs=161.1
Q ss_pred CCChHHHHHHHhcCC-----ceeeCcceeEEEEcCCc-eEEEEcCCcEEEeCEEEEecChhhhhcCcccccCCCcHHHHH
Q 024393 2 VRGYLPVINTLAKGL-----DIRLGHRVTKITRHYIG-VKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEA 75 (268)
Q Consensus 2 ~gG~~~l~~~l~~~l-----~i~~~~~V~~I~~~~~~-v~v~~~~g~~~~ad~VI~a~p~~~l~~~~~~~~p~l~~~~~~ 75 (268)
+|||+.|+++|++.+ +|+++++|++|+.++++ +.|.+ +++++.||+||+|+|++.+..+. +++++...+
T Consensus 230 ~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~~~v~~-~~~~~~ad~vv~a~p~~~~~~ll----~~~~~~~~~ 304 (477)
T 3nks_A 230 RGGLEMLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSL-RDSSLEADHVISAIPASVLSELL----PAEAAPLAR 304 (477)
T ss_dssp TTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEECGGGCEEEEC-SSCEEEESEEEECSCHHHHHHHS----CGGGHHHHH
T ss_pred CCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCceEEEEE-CCeEEEcCEEEECCCHHHHHHhc----cccCHHHHH
Confidence 689999999998854 89999999999998777 77866 55589999999999999886532 334556667
Q ss_pred HHhhcCCccccEEEEEeCCCCCCCCccceeecCCCC---ceeE-EEecc-----ccCCccEEEEEeccchHHHHh----c
Q 024393 76 AIDDLGVGIENKIIMHFDKVFWPNVEFLGVVSDTSY---GCSY-FLNLH-----KATGHCVLVYMPAGQLARDIE----K 142 (268)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~---~~~~-~~~~~-----~~~g~~~l~~~~~~~~~~~~~----~ 142 (268)
.++++.|.++.++++.|++++|+.. .+|++.+... ...+ |++.. .+.+..++++++.+.+...+. .
T Consensus 305 ~l~~~~~~~~~~v~l~~~~~~~~~~-~~g~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~l~~~~gg~~~~~~~~~~~~ 383 (477)
T 3nks_A 305 ALSAITAVSVAVVNLQYQGAHLPVQ-GFGHLVPSSEDPGVLGIVYDSVAFPEQDGSPPGLRVTVMLGGSWLQTLEASGCV 383 (477)
T ss_dssp HHHTCCEEEEEEEEEEETTCCCSSC-SSEEECCTTTCSSEEEEECHHHHCGGGSTTTTCEEEEEEECHHHHHHHHHSSCC
T ss_pred HHhcCCCCcEEEEEEEECCCCCCCC-CceEEccCCCCCCceEEEEeccccCCCCCCCCceEEEEEECCccccccccccCC
Confidence 7888999999999999999999543 3576654321 1222 22211 122566777888777665553 4
Q ss_pred CCHHHHHHHHHHHHHHhcCCCCCCcEEEEcccCCCcCCCcccCcCCCCCChH---HHHHhcCCCCCeeeeecccCCCCCc
Q 024393 143 MSDEAAANFAFTQLKKILPDASSPIQYLVSHWGTDANSLGSYSYDTVGKSHD---LYERLRIPVDNLFFAGEATSMSYPG 219 (268)
Q Consensus 143 ~~~~e~~~~i~~~l~~~~p~~~~~~~~~~~~w~~~~~~~g~~~~~~~~~~~~---~~~~~~~p~~~l~~aG~~~~~~~~g 219 (268)
++++++++.++++|+++++...+|..+.+++|.+ +++.+.++.... ....+....++|++||+|+.+ .
T Consensus 384 ~~~~~~~~~~~~~L~~~~g~~~~~~~~~v~rw~~------a~p~~~~g~~~~~~~~~~~l~~~~~~l~l~G~~~~G---~ 454 (477)
T 3nks_A 384 LSQELFQQRAQEAAATQLGLKEMPSHCLVHLHKN------CIPQYTLGHWQKLESARQFLTAHRLPLTLAGASYEG---V 454 (477)
T ss_dssp CCHHHHHHHHHHHHHHHHCCCSCCSEEEEEEEEE------EEECCBTTHHHHHHHHHHHHHHTTCSEEECSTTTSC---C
T ss_pred CCHHHHHHHHHHHHHHHhCCCCCCcEEEEEEcCC------ccCCCCCCHHHHHHHHHHHHHhcCCCEEEEccCCCC---C
Confidence 6899999999999999998756788888899944 233333443211 112233234689999999754 4
Q ss_pred cchhhHHHHHHHHHHHHH
Q 024393 220 SVHGAFSTGLMAAEDCRM 237 (268)
Q Consensus 220 ~~~gA~~Sg~~aa~~i~~ 237 (268)
++++|+.||+++|+.|+.
T Consensus 455 gv~~a~~sg~~aA~~il~ 472 (477)
T 3nks_A 455 AVNDCIESGRQAAVSVLG 472 (477)
T ss_dssp SHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHh
Confidence 799999999999999975
No 19
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.87 E-value=3.3e-21 Score=168.26 Aligned_cols=218 Identities=14% Similarity=0.100 Sum_probs=151.6
Q ss_pred CCChHHHHHHHhcC-----CceeeCcceeEEEEcCCceE-EEEcCCcEEEeCEEEEecChhhhhcCcccccCCC--cHHH
Q 024393 2 VRGYLPVINTLAKG-----LDIRLGHRVTKITRHYIGVK-VTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRL--PDWK 73 (268)
Q Consensus 2 ~gG~~~l~~~l~~~-----l~i~~~~~V~~I~~~~~~v~-v~~~~g~~~~ad~VI~a~p~~~l~~~~~~~~p~l--~~~~ 73 (268)
+||++.|+++|++. ++|+++++|++|..+++++. |.+ +|+++.||.||+|+|+..+..+ +...+.+ +...
T Consensus 192 ~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~gv~~-~g~~~~ad~VV~a~~~~~~~~l-l~~~~~~~~~~~~ 269 (425)
T 3ka7_A 192 EGGCKGIIDALETVISANGGKIHTGQEVSKILIENGKAAGIIA-DDRIHDADLVISNLGHAATAVL-CSEALSKEADAAY 269 (425)
T ss_dssp TTSHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEE-TTEEEECSEEEECSCHHHHHHH-TTTTCCTTTTHHH
T ss_pred CCCHHHHHHHHHHHHHHcCCEEEECCceeEEEEECCEEEEEEE-CCEEEECCEEEECCCHHHHHHh-cCCcccccCCHHH
Confidence 68999999999874 57999999999999988876 655 5789999999999999988653 2222223 6666
Q ss_pred HHHHhhcCCccccEEEEEeCCCCCCCCccceee-cCCCCcee--EEEe----ccccCCccEEEEEeccchHHHHhcCCHH
Q 024393 74 EAAIDDLGVGIENKIIMHFDKVFWPNVEFLGVV-SDTSYGCS--YFLN----LHKATGHCVLVYMPAGQLARDIEKMSDE 146 (268)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~--~~~~----~~~~~g~~~l~~~~~~~~~~~~~~~~~~ 146 (268)
.+.++++.+.+..++++.|+++.+... +.+ ..+..... .+.+ ...|+|+.++.+++...+ +..+. .+
T Consensus 270 ~~~~~~~~~~~~~~v~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~s~~~p~~ap~G~~~l~~~~~~~~--~~~~~-~~ 343 (425)
T 3ka7_A 270 FKMVGTLQPSAGIKICLAADEPLVGHT---GVLLTPYTRRINGVNEVTQADPELAPPGKHLTMCHQYVAP--ENVKN-LE 343 (425)
T ss_dssp HHHHHHCCCBEEEEEEEEESSCSSCSS---SEEECCSSSSEEEEECGGGTCGGGSCTTCEEEEEEEEECG--GGGGG-HH
T ss_pred HHHhhCcCCCceEEEEeecCCCccCcC---EEEECCChhhcceEEeccCCCCCcCCCCCeEEEEEecccc--ccccc-hH
Confidence 778888999888899999999876322 222 11111111 1111 234677766665544322 11122 34
Q ss_pred HHHHHHHHHHHHhcCCCCCCcEEEEcccCCCcCCCcccCcCCCCCChHHHHHhcCCCCCeeeeecccCCCCCccchhhHH
Q 024393 147 AAANFAFTQLKKILPDASSPIQYLVSHWGTDANSLGSYSYDTVGKSHDLYERLRIPVDNLFFAGEATSMSYPGSVHGAFS 226 (268)
Q Consensus 147 e~~~~i~~~l~~~~p~~~~~~~~~~~~w~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~l~~aG~~~~~~~~g~~~gA~~ 226 (268)
+.++.++++|++++|. ..+....+.+|... ++.+.++. ..++..++|++|||+||||+.+.++.+|++|+.
T Consensus 344 ~~~~~~~~~l~~~~p~-~~~~~~~v~~~~~~------~P~~~~~~--~~~~~~~~p~~gL~laG~~~~~~gg~gv~~~~~ 414 (425)
T 3ka7_A 344 SEIEMGLEDLKEIFPG-KRYEVLLIQSYHDE------WPVNRAAS--GTDPGNETPFSGLYVVGDGAKGKGGIEVEGVAL 414 (425)
T ss_dssp HHHHHHHHHHHHHSTT-CCEEEEEEEEEBTT------BCSBSSCT--TCCCCSBCSSBTEEECSTTSCCTTCCHHHHHHH
T ss_pred HHHHHHHHHHHHhCCC-CceEEEEEEEECCC------cccccccc--CCCCCCCCCcCCeEEeCCccCCCCCCccHHHHH
Confidence 5679999999999987 34555567788543 22223332 223456778899999999999976779999999
Q ss_pred HHHHHHHHHH
Q 024393 227 TGLMAAEDCR 236 (268)
Q Consensus 227 Sg~~aa~~i~ 236 (268)
||++||+.|+
T Consensus 415 s~~~~~~~i~ 424 (425)
T 3ka7_A 415 GVMSVMEKVL 424 (425)
T ss_dssp HHHHHHHC--
T ss_pred HHHHHHHHhh
Confidence 9999999886
No 20
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.86 E-value=1.5e-21 Score=174.10 Aligned_cols=237 Identities=11% Similarity=0.045 Sum_probs=119.7
Q ss_pred CCCChHHHHHHHhcC-----CceeeCcceeEEEEcCCceE-EEEcCCcEEEeCEEEEecChhhhhcCcccccCCCcHHHH
Q 024393 1 MVRGYLPVINTLAKG-----LDIRLGHRVTKITRHYIGVK-VTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKE 74 (268)
Q Consensus 1 ~~gG~~~l~~~l~~~-----l~i~~~~~V~~I~~~~~~v~-v~~~~g~~~~ad~VI~a~p~~~l~~~~~~~~p~l~~~~~ 74 (268)
++|||+.|+++|++. .+|++|++|++|..+++++. |++.+|+++.||.||+|+++..+....+.. ..++....
T Consensus 216 p~GG~~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g~~~~ad~VV~~a~~~~~~~~Ll~~-~~~~~~~~ 294 (501)
T 4dgk_A 216 PRGGTGALVQGMIKLFQDLGGEVVLNARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVVHTYRDLLSQ-HPAAVKQS 294 (501)
T ss_dssp ETTHHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSCEEECCC--------------------
T ss_pred eCCCCcchHHHHHHHHHHhCCceeeecceeEEEeeCCeEEEEEecCCcEEEcCEEEECCCHHHHHHHhccc-cccchhhh
Confidence 379999999999874 47999999999999999876 889999999999999999988765422221 12333334
Q ss_pred HHHhhcCC-ccccEEEEEeCCCCCC-CCccc----------------eeecCCCCceeEEEe----ccccCCccEEEEEe
Q 024393 75 AAIDDLGV-GIENKIIMHFDKVFWP-NVEFL----------------GVVSDTSYGCSYFLN----LHKATGHCVLVYMP 132 (268)
Q Consensus 75 ~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~----------------g~~~~~~~~~~~~~~----~~~~~g~~~l~~~~ 132 (268)
+.+++..+ .+..++++.++.+... ..... +.+...+..+..+++ ..+|+|+..+.+++
T Consensus 295 ~~~~~~~~~~s~~~~~~~l~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~s~~dp~~ap~G~~~~~~~~ 374 (501)
T 4dgk_A 295 NKLQTKRMSNSLFVLYFGLNHHHDQLAHHTVCFGPRYRELIDEIFNHDGLAEDFSLYLHAPCVTDSSLAPEGCGSYYVLA 374 (501)
T ss_dssp --------CCEEEEEEEEESSCCTTSCSEEEEEECC-------------CCCEEEEEEECGGGTCGGGSSTTCEEEEEEE
T ss_pred hhhhccccCCceeEEEecccCCccccccceeccccchhhhccccccccccccCCceecccCCCCCCCcCCCCCceEEEEE
Confidence 45555555 3456678888765321 11000 000000000111111 23467777666554
Q ss_pred ccchH----HHHhcCCHHHHHHHHHHHHHHhc-CCCCCCcEE-EE---cccCCCcC-CCcccCcCC--CCCChHHHHHh-
Q 024393 133 AGQLA----RDIEKMSDEAAANFAFTQLKKIL-PDASSPIQY-LV---SHWGTDAN-SLGSYSYDT--VGKSHDLYERL- 199 (268)
Q Consensus 133 ~~~~~----~~~~~~~~~e~~~~i~~~l~~~~-p~~~~~~~~-~~---~~w~~~~~-~~g~~~~~~--~~~~~~~~~~~- 199 (268)
..+.. .+|. ..++++.+++++.|++.+ |++.+.+.. .+ .+|.+... ..|...... +.+....+|..
T Consensus 375 ~~p~~~~~~~~~~-~~~~~~~~~vl~~l~~~~~P~~~~~i~~~~~~tP~~~~~~~~~~~G~~~g~~~~~~q~~~~RP~~~ 453 (501)
T 4dgk_A 375 PVPHLGTANLDWT-VEGPKLRDRIFAYLEQHYMPGLRSQLVTHRMFTPFDFRDQLNAYHGSAFSVEPVLTQSAWFRPHNR 453 (501)
T ss_dssp EECCTTTSCCCHH-HHHHHHHHHHHHHHHHHTCTTHHHHEEEEEEECTTTTC----------------------------
T ss_pred ecCccccccccHH-HHHHHHHHHHHHHHHHhhCCChHHceEEEEECCHHHHHHHcCCCCccccChhcchhhccccCCCCC
Confidence 32211 1122 235788899999998764 764332222 11 13433211 233322221 12222234543
Q ss_pred cCCCCCeeeeecccCCCCCccchhhHHHHHHHHHHHHHHHHH
Q 024393 200 RIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLE 241 (268)
Q Consensus 200 ~~p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i~~~l~~ 241 (268)
.+|++||||||++++| +++++||+.||+.||+.|+++|..
T Consensus 454 ~t~i~gLyl~G~~t~p--G~Gv~ga~~SG~~aA~~il~dL~g 493 (501)
T 4dgk_A 454 DKTITNLYLVGAGTHP--GAGIPGVIGSAKATAGLMLEDLIG 493 (501)
T ss_dssp --CCTTEEECCCH--------HHHHHHHHHHHHHHHHHHHC-
T ss_pred CCCCCCEEEECCCCCC--cccHHHHHHHHHHHHHHHHHHhcC
Confidence 4789999999999998 478999999999999999988754
No 21
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.83 E-value=1e-18 Score=147.68 Aligned_cols=216 Identities=13% Similarity=0.135 Sum_probs=159.1
Q ss_pred CCChHHHHHHHhcCCceeeCcceeEEEEcCCceEEEEcCCcEEE-eCEEEEecChhhhhcCcccccCCCcHHHHHHHhhc
Q 024393 2 VRGYLPVINTLAKGLDIRLGHRVTKITRHYIGVKVTVEGGKTFV-ADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDDL 80 (268)
Q Consensus 2 ~gG~~~l~~~l~~~l~i~~~~~V~~I~~~~~~v~v~~~~g~~~~-ad~VI~a~p~~~l~~~~~~~~p~l~~~~~~~~~~~ 80 (268)
.+||..+.++|+++++|+++++|++|+.++++|.|++.+|+... ||.||+|+|++.+.++ + +.. +.....+..+
T Consensus 106 ~~~~~~l~~~l~~g~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~a~~vV~a~g~~~~~~~-~---~~~-~~l~~~~~~~ 180 (336)
T 1yvv_A 106 KPGMSAITRAMRGDMPVSFSCRITEVFRGEEHWNLLDAEGQNHGPFSHVIIATPAPQASTL-L---AAA-PKLASVVAGV 180 (336)
T ss_dssp SSCTHHHHHHHHTTCCEECSCCEEEEEECSSCEEEEETTSCEEEEESEEEECSCHHHHGGG-G---TTC-HHHHHHHTTC
T ss_pred CccHHHHHHHHHccCcEEecCEEEEEEEeCCEEEEEeCCCcCccccCEEEEcCCHHHHHHh-h---ccC-HHHHHHHhhc
Confidence 36899999999999999999999999999999999998887665 9999999999987653 2 222 3445677888
Q ss_pred CCccccEEEEEeCCCCCCCCccceeecCCCCceeEE-EeccccCCc---cEEEEEeccchHHHHhcCCHHHHHHHHHHHH
Q 024393 81 GVGIENKIIMHFDKVFWPNVEFLGVVSDTSYGCSYF-LNLHKATGH---CVLVYMPAGQLARDIEKMSDEAAANFAFTQL 156 (268)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~g~---~~l~~~~~~~~~~~~~~~~~~e~~~~i~~~l 156 (268)
.|.+..++++.|++++|.....+ ... ..+..++ .+...|... ..++.+..+.++..+.+++++++.+++++.+
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~l~~~~~~p~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~l 257 (336)
T 1yvv_A 181 KMDPTWAVALAFETPLQTPMQGC--FVQ-DSPLDWLARNRSKPERDDTLDTWILHATSQWSRQNLDASREQVIEHLHGAF 257 (336)
T ss_dssp CEEEEEEEEEEESSCCSCCCCEE--EEC-SSSEEEEEEGGGSTTCCCSSEEEEEEECHHHHHHTTTSCHHHHHHHHHHHH
T ss_pred CccceeEEEEEecCCCCCCCCeE--EeC-CCceeEEEecCcCCCCCCCCcEEEEEeCHHHHHHHHhCCHHHHHHHHHHHH
Confidence 99999999999999988543322 222 2233333 322223221 3566666667777888899999999999999
Q ss_pred HHhcCC-CCCCcEEEEcccCCCcCCCcccCcCCCCCChHHHHHhcCCCCCeeeeecccCCCCCccchhhHHHHHHHHHHH
Q 024393 157 KKILPD-ASSPIQYLVSHWGTDANSLGSYSYDTVGKSHDLYERLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDC 235 (268)
Q Consensus 157 ~~~~p~-~~~~~~~~~~~w~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i 235 (268)
.+.++. ...|.....++|. +..+.+. .+. .....+.++|+||||+++. +++++|+.||..+|+.|
T Consensus 258 ~~~lg~~~~~p~~~~~~rw~---~a~~~~~---~~~-----~~~~~~~~rl~laGDa~~g---~gv~~a~~sg~~lA~~l 323 (336)
T 1yvv_A 258 AELIDCTMPAPVFSLAHRWL---YARPAGA---HEW-----GALSDADLGIYVCGDWCLS---GRVEGAWLSGQEAARRL 323 (336)
T ss_dssp HTTCSSCCCCCSEEEEEEEE---EEEESSC---CCC-----SCEEETTTTEEECCGGGTT---SSHHHHHHHHHHHHHHH
T ss_pred HHHhCCCCCCCcEEEccccC---ccCCCCC---CCC-----CeeecCCCCEEEEecCCCC---CCHHHHHHHHHHHHHHH
Confidence 999985 3457777888894 3222221 111 0122455799999999975 59999999999999999
Q ss_pred HHHH
Q 024393 236 RMRV 239 (268)
Q Consensus 236 ~~~l 239 (268)
.+.+
T Consensus 324 ~~~~ 327 (336)
T 1yvv_A 324 LEHL 327 (336)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 8754
No 22
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.78 E-value=9.8e-18 Score=146.23 Aligned_cols=209 Identities=13% Similarity=0.005 Sum_probs=137.3
Q ss_pred CCChHHHHHHHhcC-----CceeeCcceeEEEEcCCceEEEEcCCcEEEeCEEEEecChhhhhcCcccccCCCcHHHHHH
Q 024393 2 VRGYLPVINTLAKG-----LDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAA 76 (268)
Q Consensus 2 ~gG~~~l~~~l~~~-----l~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~l~~~~~~~~p~l~~~~~~~ 76 (268)
+||++.|+++|++. ++|+++++|++|..+++++ | +.+|+++.||.||+|+|+..+.++ +. .+.+++...+.
T Consensus 185 ~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~v-V-~~~g~~~~ad~Vv~a~~~~~~~~l-l~-~~~~~~~~~~~ 260 (421)
T 3nrn_A 185 RGGCKAVIDELERIIMENKGKILTRKEVVEINIEEKKV-Y-TRDNEEYSFDVAISNVGVRETVKL-IG-RDYFDRDYLKQ 260 (421)
T ss_dssp TTCHHHHHHHHHHHHHTTTCEEESSCCEEEEETTTTEE-E-ETTCCEEECSEEEECSCHHHHHHH-HC-GGGSCHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEECCEE-E-EeCCcEEEeCEEEECCCHHHHHHh-cC-cccCCHHHHHH
Confidence 68999999999873 5799999999999988888 5 567789999999999999988652 21 13467767777
Q ss_pred HhhcCCccccEEEEEeCCCCCCCCccceeecCCCCc-eeEE----EeccccCCccEEEEEeccchHHHHhcCCHHHHHHH
Q 024393 77 IDDLGVGIENKIIMHFDKVFWPNVEFLGVVSDTSYG-CSYF----LNLHKATGHCVLVYMPAGQLARDIEKMSDEAAANF 151 (268)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~----~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~e~~~~ 151 (268)
++++.+.+..++++.++++......+ .+.++... ...+ +....|+|+.++.++.... ..+.++..+.
T Consensus 261 ~~~~~~~~~~~v~l~~~~~~~~~~~~--~~~~~~~~~~i~~~s~~~p~~ap~G~~~~~~~~~~~------~~~~~~~~~~ 332 (421)
T 3nrn_A 261 VDSIEPSEGIKFNLAVPGEPRIGNTI--VFTPGLMINGFNEPSALDKSLAREGYTLIMAHMALK------NGNVKKAIEK 332 (421)
T ss_dssp HHTCCCCCEEEEEEEEESSCSSCSSE--EECTTSSSCEEECGGGTCGGGSCTTEEEEEEEEECT------TCCHHHHHHH
T ss_pred HhCCCCCceEEEEEEEcCCcccCCeE--EEcCCcceeeEeccCCCCCCcCCCCceEEEEEEeec------cccHHHHHHH
Confidence 88899988889999998875322111 11111111 0111 1122456766665544322 1234466999
Q ss_pred HHHHHHHhcCCCCCCcEEEEcccCCCcCCCcccCcCCCCCChHHHHHhcCCCCCeeeeecccCCCCCccchhhHHHHHHH
Q 024393 152 AFTQLKKILPDASSPIQYLVSHWGTDANSLGSYSYDTVGKSHDLYERLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMA 231 (268)
Q Consensus 152 i~~~l~~~~p~~~~~~~~~~~~w~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~a 231 (268)
++++|++++| ......+.+|... ...|. ..++. . .. .+| +|||+|||++.+.++-.||||+.||++|
T Consensus 333 ~~~~L~~~~p---~~~~~~~~~~~~~---~p~~~-~~~~~--~--~~-~~~-~gl~laGd~~~~~~g~~~~ga~~sg~~a 399 (421)
T 3nrn_A 333 GWEELLEIFP---EGEPLLAQVYRDG---NPVNR-TRAGL--H--IE-WPL-NEVLVVGDGYRPPGGIEVDGIALGVMKA 399 (421)
T ss_dssp HHHHHHHHCT---TCEEEEEEEC-------------------C--CC-CCC-SSEEECSTTCCCTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHcC---CCeEEEeeeccCC---CCccc-ccCCC--C--CC-CCC-CcEEEECCcccCCCceeeehHHHHHHHH
Confidence 9999999999 2333445567432 11110 01111 1 11 567 9999999999974222459999999999
Q ss_pred HHHH
Q 024393 232 AEDC 235 (268)
Q Consensus 232 a~~i 235 (268)
|+.|
T Consensus 400 A~~l 403 (421)
T 3nrn_A 400 LEKL 403 (421)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 9998
No 23
>2e1m_C L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.76 E-value=1e-18 Score=134.54 Aligned_cols=115 Identities=19% Similarity=0.190 Sum_probs=99.0
Q ss_pred CCc-cEEEEEeccchHHHHhcCCHHHHHHHHHHHHHHhcC-CCCCCc-EE--EEcccCCCcCCCcccCcCCCCCChHHHH
Q 024393 123 TGH-CVLVYMPAGQLARDIEKMSDEAAANFAFTQLKKILP-DASSPI-QY--LVSHWGTDANSLGSYSYDTVGKSHDLYE 197 (268)
Q Consensus 123 ~g~-~~l~~~~~~~~~~~~~~~~~~e~~~~i~~~l~~~~p-~~~~~~-~~--~~~~w~~~~~~~g~~~~~~~~~~~~~~~ 197 (268)
++. .+|+.|+.++.+..+..++++++++.++++|+++|+ +. .+. .+ ..++|.+++|+.|+|....|+....+++
T Consensus 33 ~g~~~~L~~~~~g~~A~~~~~l~~~e~~~~~l~~L~~~~g~~~-~~~~~~~~~~~~W~~dp~~~Ga~s~~~pg~~~~~~~ 111 (181)
T 2e1m_C 33 TQGGVVLAAYSWSDDAARWDSFDDAERYGYALENLQSVHGRRI-EVFYTGAGQTQSWLRDPYACGEAAVYTPHQMTAFHL 111 (181)
T ss_dssp CSCEEEEEEEEEHHHHHHHTTSCTTTTHHHHHHHHHHHHCGGG-GGTEEEEEEEEESSSCTTTSSSEECCCTTHHHHHHH
T ss_pred CCCCEEEEEEcCChHHHHHHcCCHHHHHHHHHHHHHHHhCCCc-HhhccCcceecccCCCCCCCCcccCcCCCchHHHHH
Confidence 344 477788888888899899999999999999999995 44 454 57 8899999999999998878887656677
Q ss_pred HhcCCCCCeeeeecccCCCCCccchhhHHHHHHHHHHHHHHH
Q 024393 198 RLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRV 239 (268)
Q Consensus 198 ~~~~p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i~~~l 239 (268)
.+++|.++|||||++++. +.|+|+||+.||.++|+.|+..+
T Consensus 112 ~l~~p~grl~FAGe~ts~-~~g~~eGAl~SG~raA~~i~~~l 152 (181)
T 2e1m_C 112 DVVRPEGPVYFAGEHVSL-KHAWIEGAVETAVRAAIAVNEAP 152 (181)
T ss_dssp HHHSCBTTEEECSGGGTT-STTSHHHHHHHHHHHHHHHHTCC
T ss_pred HHhCCCCcEEEEEHHHcC-CccCHHHHHHHHHHHHHHHHHHh
Confidence 888999999999999996 78999999999999999998754
No 24
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=99.76 E-value=5e-18 Score=150.57 Aligned_cols=222 Identities=13% Similarity=0.081 Sum_probs=152.1
Q ss_pred CCChHHHHHHHhcCC---ceeeC--cceeEEEEcCCceEEEEcCCcEEEeCEEEEecChhhhhcCcccccCCCcHHHHHH
Q 024393 2 VRGYLPVINTLAKGL---DIRLG--HRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAA 76 (268)
Q Consensus 2 ~gG~~~l~~~l~~~l---~i~~~--~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~l~~~~~~~~p~l~~~~~~~ 76 (268)
.||+++|+++|++.+ +|+++ ++|++|+.++++|. +.+|+++.||+||+|+|++.+.++....++++++...+.
T Consensus 212 ~gG~~~l~~~la~~l~~~~i~~~~~~~V~~I~~~~~~v~--~~~G~~~~ad~VI~a~p~~~~~~ll~~~~~~~~~~~~~~ 289 (484)
T 4dsg_A 212 RGGTGIIYQAIKEKLPSEKLTFNSGFQAIAIDADAKTIT--FSNGEVVSYDYLISTVPFDNLLRMTKGTGFKGYDEWPAI 289 (484)
T ss_dssp SSCTHHHHHHHHHHSCGGGEEECGGGCEEEEETTTTEEE--ETTSCEEECSEEEECSCHHHHHHHEECSSCTTGGGHHHH
T ss_pred CCCHHHHHHHHHhhhhhCeEEECCCceeEEEEecCCEEE--ECCCCEEECCEEEECCCHHHHHHHhhccCCCCCHHHHHH
Confidence 599999999999988 69999 56999998877654 478889999999999999998753222234578888888
Q ss_pred HhhcCCccccEEEEEeCCCCCCC-CccceeecCCCC-ce---eEEEe---ccccCCccEEEEEeccchHHHHhcCCHHHH
Q 024393 77 IDDLGVGIENKIIMHFDKVFWPN-VEFLGVVSDTSY-GC---SYFLN---LHKATGHCVLVYMPAGQLARDIEKMSDEAA 148 (268)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~-~~---~~~~~---~~~~~g~~~l~~~~~~~~~~~~~~~~~~e~ 148 (268)
++.+.|.+..++.+.|+.+.-.+ .+.++.+.+... ++ ..+.+ ...|+|+.+++..+... ..+.++++++
T Consensus 290 l~~l~y~s~~~v~l~~~~~~~~~~~~~~~i~vp~~~~~~~ri~~~s~~~p~~ap~g~~~l~~e~~~~---~~~~~~d~~l 366 (484)
T 4dsg_A 290 ADKMVYSSTNVIGIGVKGTPPPHLKTACWLYFPEDTSPFYRATVFSNYSKYNVPEGHWSLMLEVSES---KYKPVNHSTL 366 (484)
T ss_dssp HHHCCEEEEEEEEEEEESCCCGGGTTCCEEECCSTTCSCSEEECGGGTCGGGSCTTEEEEEEEEEEB---TTBCCCTTSH
T ss_pred HhCCCcCceEEEEEEEcCCCcccCCCCeEEEEEcCCCeEEEEEeecCCCcccCCCCeEEEEEEEecC---cCCcCCHHHH
Confidence 89999999999999998763211 223444433221 11 11111 22356665665554332 3456889999
Q ss_pred HHHHHHHHHHhcCCC-CCCc-EEEEcccCCCcCCCcccCcCCCCCCh---HHHHHhcCCCCCeeeeecccCCCCC-ccch
Q 024393 149 ANFAFTQLKKILPDA-SSPI-QYLVSHWGTDANSLGSYSYDTVGKSH---DLYERLRIPVDNLFFAGEATSMSYP-GSVH 222 (268)
Q Consensus 149 ~~~i~~~l~~~~p~~-~~~~-~~~~~~w~~~~~~~g~~~~~~~~~~~---~~~~~~~~p~~~l~~aG~~~~~~~~-g~~~ 222 (268)
++.++++|.++.... .+++ ...+.+|. .+|+.+.++... .++..+.+ . ||+++|......|+ ++|+
T Consensus 367 ~~~a~~~L~~~~~~~~~~~~~~~~v~r~~------~~yP~y~~~~~~~~~~~~~~l~~-~-~l~~~Gr~g~~~y~v~~~d 438 (484)
T 4dsg_A 367 IEDCIVGCLASNLLLPEDLLVSKWHYRIE------KGYPTPFIGRNNLLEKAQPELMS-R-CIYSRGRFGAWRYEVGNQD 438 (484)
T ss_dssp HHHHHHHHHHTTSCCTTCCEEEEEEEEEE------EEEECCBTTHHHHHHHHHHHHHH-T-TEEECSTTTTCCGGGCSHH
T ss_pred HHHHHHHHHHcCCCCccceEEEEEEEEeC------ccccCCCccHHHHHHHHHHHHHh-C-CcEeecCCcccccCCCChH
Confidence 999999999986432 2333 34566773 344444454322 22333333 3 99999997655443 4799
Q ss_pred hhHHHHHHHHHHHH
Q 024393 223 GAFSTGLMAAEDCR 236 (268)
Q Consensus 223 gA~~Sg~~aa~~i~ 236 (268)
.|+.||+.||+.|+
T Consensus 439 ~~i~sg~~aa~~i~ 452 (484)
T 4dsg_A 439 HSFMQGVEAIDHVL 452 (484)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999997
No 25
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.72 E-value=2.3e-17 Score=147.18 Aligned_cols=220 Identities=12% Similarity=0.053 Sum_probs=142.6
Q ss_pred CCChHHHHHHHhcCC-----ceeeCcceeEEEEcCCceEEEEcCCcEEEeCEEEEecChhhhhcCcccccCCCcHHHHHH
Q 024393 2 VRGYLPVINTLAKGL-----DIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAA 76 (268)
Q Consensus 2 ~gG~~~l~~~l~~~l-----~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~l~~~~~~~~p~l~~~~~~~ 76 (268)
+||+++|+++|++.+ +|++|++|++|..+++++ ++.+|+++.||+||+|+|++.+..+. .+.....+
T Consensus 218 ~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~~v--~~~~G~~~~ad~vI~t~P~~~l~~~l------~~~~~~~~ 289 (513)
T 4gde_A 218 RGGTGGIWIAVANTLPKEKTRFGEKGKVTKVNANNKTV--TLQDGTTIGYKKLVSTMAVDFLAEAM------NDQELVGL 289 (513)
T ss_dssp SSHHHHHHHHHHHTSCGGGEEESGGGCEEEEETTTTEE--EETTSCEEEEEEEEECSCHHHHHHHT------TCHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhcCeeeecceEEEEEEccCCEE--EEcCCCEEECCEEEECCCHHHHHHhc------CchhhHhh
Confidence 699999999999977 599999999999877654 46789999999999999999986532 13344566
Q ss_pred HhhcCCccccEEEEEeCCCCCCC-Cccc-eeecCCCCce-----------------------eEEEecc----ccCCccE
Q 024393 77 IDDLGVGIENKIIMHFDKVFWPN-VEFL-GVVSDTSYGC-----------------------SYFLNLH----KATGHCV 127 (268)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~-g~~~~~~~~~-----------------------~~~~~~~----~~~g~~~ 127 (268)
.+.+.|.+...+.+.++...... .+.. .+..+...++ ..+.+.. .+.+...
T Consensus 290 ~~~l~y~~~~~v~l~~~~~~~~~~~~~~~~y~~~~~~~f~Ri~~~~n~sp~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (513)
T 4gde_A 290 TKQLFYSSTHVIGVGVRGSRPERIGDKCWLYFPEDNCPFYRATIFSNYSPYNQPEASAALPTMQLADGSRPQSTEAKEGP 369 (513)
T ss_dssp HTTCCEEEEEEEEEEEESSCCTTTTTCCEEECCSTTCSCSEEECGGGTCGGGSCCTTCCEECCEETTSCCCSCCSEECCC
T ss_pred hhcccCCceEEEEEEEeccccccccccceeeccCCCCceeEEEecCCCCcccCCCCCceEEEEEeccCCCcccccCCcce
Confidence 77888988888888887643211 1111 1111111000 0111110 1112223
Q ss_pred EEEEeccchHHHHhcCCHHHHHHHHHHHHHHhcCCCC--CCcEEEEcccCCCcCCCcccCcCCCCCCh---HHHHHhcCC
Q 024393 128 LVYMPAGQLARDIEKMSDEAAANFAFTQLKKILPDAS--SPIQYLVSHWGTDANSLGSYSYDTVGKSH---DLYERLRIP 202 (268)
Q Consensus 128 l~~~~~~~~~~~~~~~~~~e~~~~i~~~l~~~~p~~~--~~~~~~~~~w~~~~~~~g~~~~~~~~~~~---~~~~~~~~p 202 (268)
+..++.......++.++++++++.++++|.++.+... .++...+.+|.+ + |+.+..+... ..++.+..
T Consensus 370 ~~~~~~~~~~~~~~~~~de~l~~~~~~~L~~~~~i~~~~~i~~~~v~r~~~---a---yP~y~~~~~~~~~~~~~~l~~- 442 (513)
T 4gde_A 370 YWSIMLEVSESSMKPVNQETILADCIQGLVNTEMLKPTDEIVSTYHRRFDH---G---YPTPTLEREGTLTQILPKLQD- 442 (513)
T ss_dssp EEEEEEEEEEBTTBCCCTTTHHHHHHHHHHHTTSSCTTCEEEEEEEEEEEE---E---EECCBTTHHHHHHHHHHHHHH-
T ss_pred EEEEEecccchhccCCCHHHHHHHHHHHHHHhcCCCCccceEEEEEEECCC---e---ecccCHhHHHHHHHHHHHHhh-
Confidence 3333333333456778999999999999999987532 345667778843 2 3323333321 22344443
Q ss_pred CCCeeeeecccCCCCC-ccchhhHHHHHHHHHHHHH
Q 024393 203 VDNLFFAGEATSMSYP-GSVHGAFSTGLMAAEDCRM 237 (268)
Q Consensus 203 ~~~l~~aG~~~~~~~~-g~~~gA~~Sg~~aa~~i~~ 237 (268)
+|||++|......|. ++|++|+.||+.||+.|+.
T Consensus 443 -~~l~~~GR~g~~~Y~~~n~D~a~~~g~~aa~~I~~ 477 (513)
T 4gde_A 443 -KDIWSRGRFGSWRYEVGNQDHSFMLGVEAVDNIVN 477 (513)
T ss_dssp -TTEEECSTTTTCCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred -cCcEEecCCcccCcCCCCHHHHHHHHHHHHHHHHc
Confidence 599999976554443 6899999999999999985
No 26
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.67 E-value=8.7e-16 Score=133.93 Aligned_cols=215 Identities=14% Similarity=0.083 Sum_probs=131.2
Q ss_pred CCCChHHHHHHHhcCC--ceeeCcceeEEEEcCCceEEEEcCCcEEEeCEEEEecChhhhhcCcccccCCCcHHHHHHHh
Q 024393 1 MVRGYLPVINTLAKGL--DIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAID 78 (268)
Q Consensus 1 ~~gG~~~l~~~l~~~l--~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~l~~~~~~~~p~l~~~~~~~~~ 78 (268)
+.||++.++++|++.+ +|++|++|++|+.+++++.|++.+| ++.||+||+|+|+..+..+ .++++++. +.+.
T Consensus 201 ~~~g~~~l~~~l~~~l~~~v~~~~~V~~i~~~~~~v~v~~~~g-~~~ad~Vv~a~~~~~~~~~----l~~~~~~~-~~~~ 274 (424)
T 2b9w_A 201 WADGTQAMFEHLNATLEHPAERNVDITRITREDGKVHIHTTDW-DRESDVLVLTVPLEKFLDY----SDADDDER-EYFS 274 (424)
T ss_dssp CTTCHHHHHHHHHHHSSSCCBCSCCEEEEECCTTCEEEEESSC-EEEESEEEECSCHHHHTTS----BCCCHHHH-HHHT
T ss_pred eCChHHHHHHHHHHhhcceEEcCCEEEEEEEECCEEEEEECCC-eEEcCEEEECCCHHHHhhc----cCCCHHHH-HHHh
Confidence 4689999999999977 6999999999999888888888887 4899999999999987432 24444443 3456
Q ss_pred hcCCccccEEEEEeCCCCCCCCccceeecCC--C--C-ceeEEEeccccCCccEEEEEeccchHHHHhcCCHHHHHHHHH
Q 024393 79 DLGVGIENKIIMHFDKVFWPNVEFLGVVSDT--S--Y-GCSYFLNLHKATGHCVLVYMPAGQLARDIEKMSDEAAANFAF 153 (268)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~--~-~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~e~~~~i~ 153 (268)
++.+.+.. +.+.+...+. ...+..+.. . . ...+.....+.+....++.|+.+.. ..+...+++++++.++
T Consensus 275 ~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~v~ 349 (424)
T 2b9w_A 275 KIIHQQYM-VDACLVKEYP---TISGYVPDNMRPERLGHVMVYYHRWADDPHQIITTYLLRNH-PDYADKTQEECRQMVL 349 (424)
T ss_dssp TCEEEEEE-EEEEEESSCC---SSEEECGGGGSGGGTTSCCEEEECCTTCTTSCEEEEEECCB-TTBCCCCHHHHHHHHH
T ss_pred cCCcceeE-EEEEEeccCC---cccccccCCCCCcCCCcceEEeeecCCCCceEEEEEeccCC-CcccccChHHHHHHHH
Confidence 66665533 2223332222 112332211 0 0 0122222221222345666655432 4456778899999999
Q ss_pred HHHHHhcCCCCCCcEEEEcccCCCcCC-CcccCcCCCCCChHHHHHhcCCCCCeeeeecccCCCCCccchhhHHHHHHHH
Q 024393 154 TQLKKILPDASSPIQYLVSHWGTDANS-LGSYSYDTVGKSHDLYERLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAA 232 (268)
Q Consensus 154 ~~l~~~~p~~~~~~~~~~~~w~~~~~~-~g~~~~~~~~~~~~~~~~~~~p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa 232 (268)
++|+++.+. .+..+...+|...+.. ...| ..|. ..+....++.+|+||||+++.. |++|+|+.||.+||
T Consensus 350 ~~l~~l~~~--~~~~~~~~~w~~~p~~~~~~~---~~G~--~~~~~~~~~~~~l~~aG~~~~~---g~~e~a~~Sg~~aA 419 (424)
T 2b9w_A 350 DDMETFGHP--VEKIIEEQTWYYFPHVSSEDY---KAGW--YEKVEGMQGRRNTFYAGEIMSF---GNFDEVCHYSKDLV 419 (424)
T ss_dssp HHHHHTTCC--EEEEEEEEEEEEEEECCHHHH---HTTH--HHHHHHTTTGGGEEECSGGGSC---SSHHHHHHHHHHHH
T ss_pred HHHHHcCCc--ccccccccceeeeeccCHHHH---hccH--HHHHHHHhCCCCceEecccccc---ccHHHHHHHHHHHH
Confidence 999984332 1112223455321110 0000 1111 1112223456799999999874 68999999999999
Q ss_pred HHHH
Q 024393 233 EDCR 236 (268)
Q Consensus 233 ~~i~ 236 (268)
+.|+
T Consensus 420 ~~~l 423 (424)
T 2b9w_A 420 TRFF 423 (424)
T ss_dssp HHHT
T ss_pred HHhc
Confidence 9874
No 27
>2e1m_B L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.30 E-value=7.5e-14 Score=100.26 Aligned_cols=107 Identities=18% Similarity=0.225 Sum_probs=67.4
Q ss_pred cEEEeCEEEEecChhhhhcCcccccCCCcHHHHHHHhhcCCccccEEEEEeCCCCCCCCccceeecCCCCceeEEEeccc
Q 024393 42 KTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDDLGVGIENKIIMHFDKVFWPNVEFLGVVSDTSYGCSYFLNLHK 121 (268)
Q Consensus 42 ~~~~ad~VI~a~p~~~l~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 121 (268)
++++||+||+|+|+..+. .+.|.|+||..+.++++++.|+...|+++.|+++||++.+..|. +...
T Consensus 4 ~~~~Ad~VIvTvP~~vL~--~I~F~P~LP~~k~~Ai~~l~~g~~~Kv~l~f~~~FW~~~~~~gd------------~s~~ 69 (130)
T 2e1m_B 4 QTWTGDLAIVTIPFSSLR--FVKVTPPFSYKKRRAVIETHYDQATKVLLEFSRRWWEFTEADWK------------RELD 69 (130)
T ss_dssp EEEEESEEEECSCHHHHT--TSEEESCCCHHHHHHHHHCCEECEEEEEEEESSCGGGCCHHHHH------------HHHH
T ss_pred eEEEcCEEEEcCCHHHHh--cCcCCCCCCHHHHHHHHhCCCcceeEEEEEECCCCCCCCCcccc------------ccCC
Confidence 578999999999999997 57899999999999999999999999999999999976543221 1011
Q ss_pred cCCccEEEEEe-ccchHHHHhcCCHHHHHHHHHHHHHHhcCCC
Q 024393 122 ATGHCVLVYMP-AGQLARDIEKMSDEAAANFAFTQLKKILPDA 163 (268)
Q Consensus 122 ~~g~~~l~~~~-~~~~~~~~~~~~~~e~~~~i~~~l~~~~p~~ 163 (268)
+.+.++++.|. +++.+..|..+++ +..+.++..|.+++|+.
T Consensus 70 ~~~pg~l~~f~~wg~~A~~~~~l~~-~~r~~~~~~l~~~~p~~ 111 (130)
T 2e1m_B 70 AIAPGLYDYYQQWGEDDAEAALALP-QSVRNLPTGLLGAHPSV 111 (130)
T ss_dssp HHSTTHHHHHHHHCCCSCCCC----------------------
T ss_pred CCCCeEEEEecccCHHHHHHhcCCH-HHHHHHHHHHHHhCCCC
Confidence 22334666777 4777777877765 77888999999999973
No 28
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.82 E-value=5.6e-10 Score=96.46 Aligned_cols=72 Identities=18% Similarity=0.102 Sum_probs=55.4
Q ss_pred CCCChHHHHHHHhcCC--ceeeCcceeEEEEcCCceEEEEcCCcEE-EeCEEEEecChhhhhcCcccccCCCcHHHHHHH
Q 024393 1 MVRGYLPVINTLAKGL--DIRLGHRVTKITRHYIGVKVTVEGGKTF-VADAVVVAVPLGVLKARTIKFEPRLPDWKEAAI 77 (268)
Q Consensus 1 ~~gG~~~l~~~l~~~l--~i~~~~~V~~I~~~~~~v~v~~~~g~~~-~ad~VI~a~p~~~l~~~~~~~~p~l~~~~~~~~ 77 (268)
++||+++|+++|++.+ +|++|++|++|... | + ++ .||+||+|+|++.+..+ .+
T Consensus 200 p~gG~~~l~~~l~~~~g~~I~l~~~V~~I~~~---v-----~--~~~~aD~VI~t~p~~~l~~~--------------~l 255 (399)
T 1v0j_A 200 PTDGYTAWLQNMAADHRIEVRLNTDWFDVRGQ---L-----R--PGSPAAPVVYTGPLDRYFDY--------------AE 255 (399)
T ss_dssp BTTHHHHHHHHHTCSTTEEEECSCCHHHHHHH---H-----T--TTSTTCCEEECSCHHHHTTT--------------TT
T ss_pred ccccHHHHHHHHHhcCCeEEEECCchhhhhhh---h-----h--hcccCCEEEECCcHHHHHhh--------------hh
Confidence 4799999999999865 69999999999743 2 1 34 69999999999987532 13
Q ss_pred hhcCCccccEEEEEeCCCC
Q 024393 78 DDLGVGIENKIIMHFDKVF 96 (268)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~ 96 (268)
..+.|.+...+.+.++.+.
T Consensus 256 ~~l~y~s~~~~~~~~~~~~ 274 (399)
T 1v0j_A 256 GRLGWRTLDFEVEVLPIGD 274 (399)
T ss_dssp CCCCEEEEEEEEEEESSSC
T ss_pred CCCCcceEEEEEEEEcccc
Confidence 4677877777788887653
No 29
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=98.63 E-value=1.5e-08 Score=86.42 Aligned_cols=71 Identities=17% Similarity=0.178 Sum_probs=55.5
Q ss_pred CCCChHHHHHHHhcCCceeeCcceeEEEEcCCceEEEEcCCcEEEeCEEEEecChhhhhcCcccccCCCcHHHHHHHhhc
Q 024393 1 MVRGYLPVINTLAKGLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDDL 80 (268)
Q Consensus 1 ~~gG~~~l~~~l~~~l~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~l~~~~~~~~p~l~~~~~~~~~~~ 80 (268)
++||+++|+++|+++++|++|++|.+|.. +| .+.||+||+|+|++.+..+ .+.++
T Consensus 190 p~gG~~~l~~~l~~g~~i~l~~~V~~i~~---~v--------~~~~D~VV~a~p~~~~~~~--------------~l~~l 244 (367)
T 1i8t_A 190 PVGGYTKLIEKMLEGVDVKLGIDFLKDKD---SL--------ASKAHRIIYTGPIDQYFDY--------------RFGAL 244 (367)
T ss_dssp BTTCHHHHHHHHHTTSEEECSCCGGGSHH---HH--------HTTEEEEEECSCHHHHTTT--------------TTCCC
T ss_pred cCCCHHHHHHHHhcCCEEEeCCceeeech---hh--------hccCCEEEEeccHHHHHHH--------------hhCCC
Confidence 47999999999999999999999998863 12 1358999999999986421 23467
Q ss_pred CCccccEEEEEeCCCC
Q 024393 81 GVGIENKIIMHFDKVF 96 (268)
Q Consensus 81 ~~~~~~~~~~~~~~~~ 96 (268)
.|.+...+.+.++.+.
T Consensus 245 ~y~s~~~v~~~~d~~~ 260 (367)
T 1i8t_A 245 EYRSLKFETERHEFPN 260 (367)
T ss_dssp CEEEEEEEEEEESSSC
T ss_pred CCceEEEEEEEecccc
Confidence 7877777888888653
No 30
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=98.48 E-value=3.2e-07 Score=78.70 Aligned_cols=64 Identities=16% Similarity=0.208 Sum_probs=50.3
Q ss_pred CCCChHHHHHHHhcC--CceeeCccee-EEEEcCCceEEEEcCCcEEEeCEEEEecChhhhhcCcccccCCCcHHHHHHH
Q 024393 1 MVRGYLPVINTLAKG--LDIRLGHRVT-KITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAI 77 (268)
Q Consensus 1 ~~gG~~~l~~~l~~~--l~i~~~~~V~-~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~l~~~~~~~~p~l~~~~~~~~ 77 (268)
++||+++|+++|++. .+|++|++|. +|.. .||+||+|+|++.+..+ .+
T Consensus 194 p~gG~~~l~~~l~~~~g~~I~l~~~V~~~i~~---------------~~d~VI~a~p~~~~~~~--------------~l 244 (384)
T 2bi7_A 194 PKCGYTQMIKSILNHENIKVDLQREFIVEERT---------------HYDHVFYSGPLDAFYGY--------------QY 244 (384)
T ss_dssp ETTHHHHHHHHHHCSTTEEEEESCCCCGGGGG---------------GSSEEEECSCHHHHTTT--------------TT
T ss_pred ECcCHHHHHHHHHhcCCCEEEECCeeehhhhc---------------cCCEEEEcCCHHHHHHh--------------hc
Confidence 379999999999984 4799999998 7753 28999999999987532 13
Q ss_pred hhcCCccccEEEEEeC
Q 024393 78 DDLGVGIENKIIMHFD 93 (268)
Q Consensus 78 ~~~~~~~~~~~~~~~~ 93 (268)
..+.|.+...+.+.++
T Consensus 245 g~l~y~s~~~v~~~~d 260 (384)
T 2bi7_A 245 GRLGYRTLDFKKFTYQ 260 (384)
T ss_dssp CCCCEEEEEEEEEEEE
T ss_pred CCCCcceEEEEEEEeC
Confidence 4577877776777776
No 31
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.33 E-value=6.2e-06 Score=72.26 Aligned_cols=54 Identities=15% Similarity=0.017 Sum_probs=46.0
Q ss_pred CCChHHHHHHHhcC-----CceeeCcceeEEEEc--CCceE-EEEcCCcEEEeCEEEEecChh
Q 024393 2 VRGYLPVINTLAKG-----LDIRLGHRVTKITRH--YIGVK-VTVEGGKTFVADAVVVAVPLG 56 (268)
Q Consensus 2 ~gG~~~l~~~l~~~-----l~i~~~~~V~~I~~~--~~~v~-v~~~~g~~~~ad~VI~a~p~~ 56 (268)
+||++.|+++|++. .+|+++++|++|..+ ++++. |.+ +|+++.||.||+|+++.
T Consensus 238 ~gG~~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~ 299 (453)
T 2bcg_G 238 MYGLGELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYF 299 (453)
T ss_dssp TTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGC
T ss_pred CCCHHHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCcc
Confidence 69999999999864 479999999999988 77754 555 68889999999999875
No 32
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.14 E-value=0.00037 Score=55.53 Aligned_cols=91 Identities=16% Similarity=0.167 Sum_probs=61.2
Q ss_pred HHHHhcCCHHHHHHHHHHHHHHhcCC-CCCCcEEEEcccCCCcCCCcccCcCCCCCChHHHHHhcCCCCCeeeeecccCC
Q 024393 137 ARDIEKMSDEAAANFAFTQLKKILPD-ASSPIQYLVSHWGTDANSLGSYSYDTVGKSHDLYERLRIPVDNLFFAGEATSM 215 (268)
Q Consensus 137 ~~~~~~~~~~e~~~~i~~~l~~~~p~-~~~~~~~~~~~w~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~l~~aG~~~~~ 215 (268)
..........+..+.....+...++. ...+.....++| .|+.+.. .... +...++.++||+|||++.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w---~~a~~~~---~~~~-----~~~~~~~~~v~l~GDa~~g 306 (336)
T 3kkj_A 238 SRQNLDASREQVIEHLHGAFAELIDCTMPAPVFSLAHRW---LYARPAG---AHEW-----GALSDADLGIYVCGDWCLS 306 (336)
T ss_dssp HHHTTTSCHHHHHHHHHHHHHTTCSSCCCCCSEEEEEEE---EEEEESS---CCCC-----SSEEETTTTEEECCGGGTT
T ss_pred ccccccccchhhhhhhhhhhhhhccCCcCcchheeccce---eeccccc---ccCc-----cceeeCCCCEEEEecccCC
Confidence 34445556677777777877777664 456667777788 3322111 1100 1223456799999999865
Q ss_pred CCCccchhhHHHHHHHHHHHHHHHHH
Q 024393 216 SYPGSVHGAFSTGLMAAEDCRMRVLE 241 (268)
Q Consensus 216 ~~~g~~~gA~~Sg~~aa~~i~~~l~~ 241 (268)
+++++|+.||+.||+.|++.|+.
T Consensus 307 ---~gv~~A~~sG~~aA~~I~~~L~~ 329 (336)
T 3kkj_A 307 ---GRVEGAWLSGQEAARRLLEHLQL 329 (336)
T ss_dssp ---SSHHHHHHHHHHHHHHHHHHTTC
T ss_pred ---cCHHHHHHHHHHHHHHHHHHhhc
Confidence 57999999999999999987754
No 33
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.72 E-value=3.7e-05 Score=66.88 Aligned_cols=56 Identities=14% Similarity=0.056 Sum_probs=48.1
Q ss_pred CCChHHHHHHHhc-----CCceeeCcceeEEEEcCCceEEEEcCCcEEEeCEEEEecChhh
Q 024393 2 VRGYLPVINTLAK-----GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGV 57 (268)
Q Consensus 2 ~gG~~~l~~~l~~-----~l~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~ 57 (268)
+||++.|+++|++ +.+|+++++|++|..+++++.+...+|+++.||+||+|+++..
T Consensus 230 ~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~v~~v~~~g~~~~ad~VV~a~~~~~ 290 (433)
T 1d5t_A 230 LYGLGELPQGFARLSAIYGGTYMLNKPVDDIIMENGKVVGVKSEGEVARCKQLICDPSYVP 290 (433)
T ss_dssp TTCTTHHHHHHHHHHHHHTCCCBCSCCCCEEEEETTEEEEEEETTEEEECSEEEECGGGCG
T ss_pred CcCHHHHHHHHHHHHHHcCCEEECCCEEEEEEEeCCEEEEEEECCeEEECCEEEECCCCCc
Confidence 6899999999976 4579999999999998888774445888999999999998864
No 34
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=97.67 E-value=6.1e-05 Score=66.04 Aligned_cols=56 Identities=13% Similarity=0.109 Sum_probs=46.7
Q ss_pred CCCChHHHHHHHhc-----CCceeeCcceeEEEE-cCCc-eEEEEcCCcEEEeCEEEEecChh
Q 024393 1 MVRGYLPVINTLAK-----GLDIRLGHRVTKITR-HYIG-VKVTVEGGKTFVADAVVVAVPLG 56 (268)
Q Consensus 1 ~~gG~~~l~~~l~~-----~l~i~~~~~V~~I~~-~~~~-v~v~~~~g~~~~ad~VI~a~p~~ 56 (268)
++||++.|+++|++ +++|+++++|++|.. ++++ +.|++.+|+++.||.||+|+...
T Consensus 251 p~gG~~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 251 PLYGLGGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp ETTCTTHHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred ECCCHHHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCcc
Confidence 37999999999977 457999999999998 6666 45888888899999999998653
No 35
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.59 E-value=0.00022 Score=61.16 Aligned_cols=69 Identities=10% Similarity=0.102 Sum_probs=51.8
Q ss_pred CCChHHHHHHHhc--CCceeeCcceeEEEEcCCceEEEEcCCcEEEeCEEEEecChhhhhcCcccccCCCcHHHHHHHhh
Q 024393 2 VRGYLPVINTLAK--GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDD 79 (268)
Q Consensus 2 ~gG~~~l~~~l~~--~l~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~l~~~~~~~~p~l~~~~~~~~~~ 79 (268)
+||+++|.++|++ +++|++|++|.++ +.++.+|+||+|+|++.+... ....
T Consensus 219 ~gGy~~l~e~l~~~~g~~V~l~~~v~~~-------------~~~~~~d~vI~T~P~d~~~~~--------------~~g~ 271 (397)
T 3hdq_A 219 LHGYTRMFQNMLSSPNIKVMLNTDYREI-------------ADFIPFQHMIYTGPVDAFFDF--------------CYGK 271 (397)
T ss_dssp TTCHHHHHHHHTCSTTEEEEESCCGGGT-------------TTTSCEEEEEECSCHHHHTTT--------------TTCC
T ss_pred CCCHHHHHHHHHhccCCEEEECCeEEec-------------cccccCCEEEEcCCHHHHHHH--------------hcCC
Confidence 6999999999988 4589999999732 335678999999999876320 2345
Q ss_pred cCCccccEEEEEeCCCCC
Q 024393 80 LGVGIENKIIMHFDKVFW 97 (268)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~ 97 (268)
+.|.+...+.+.++.+.+
T Consensus 272 L~yrsl~~~~~~~~~~~~ 289 (397)
T 3hdq_A 272 LPYRSLEFRHETHDTEQL 289 (397)
T ss_dssp CCEEEEEEEEEEESSSCS
T ss_pred CCCceEEEEEEEeccccC
Confidence 677777777788876543
No 36
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.41 E-value=0.00023 Score=64.56 Aligned_cols=81 Identities=12% Similarity=0.082 Sum_probs=58.0
Q ss_pred CCCChHHHHHHHhc-----CCceeeCcceeEEEEcC--CceE-EEEcCCcEEEeCEEEEecChhhhhcCcccccCCCcHH
Q 024393 1 MVRGYLPVINTLAK-----GLDIRLGHRVTKITRHY--IGVK-VTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDW 72 (268)
Q Consensus 1 ~~gG~~~l~~~l~~-----~l~i~~~~~V~~I~~~~--~~v~-v~~~~g~~~~ad~VI~a~p~~~l~~~~~~~~p~l~~~ 72 (268)
++|||+.|+++|++ +.+|+++++|++|..++ +++. |.+.+|+++.||+||++ +..+.. .+
T Consensus 373 p~GG~g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~--~~~lp~-------~~--- 440 (650)
T 1vg0_A 373 PLYGQGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIE--DSYLSE-------NT--- 440 (650)
T ss_dssp ETTCTTHHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEE--GGGBCT-------TT---
T ss_pred eCCchhHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEEC--hhhcCH-------hH---
Confidence 36999999999977 34799999999999887 6655 55577999999999993 332211 11
Q ss_pred HHHHHhhcCCccccEEEEEeCCCCC
Q 024393 73 KEAAIDDLGVGIENKIIMHFDKVFW 97 (268)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (268)
..++.+..+.++.+.++.+.-
T Consensus 441 ----~~~~~~~~v~R~i~i~~~pi~ 461 (650)
T 1vg0_A 441 ----CSRVQYRQISRAVLITDGSVL 461 (650)
T ss_dssp ----TTTCCCEEEEEEEEEESSCSS
T ss_pred ----hccccccceEEEEEEecCCCC
Confidence 112245567778888887653
No 37
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=97.09 E-value=0.0048 Score=54.97 Aligned_cols=43 Identities=28% Similarity=0.278 Sum_probs=36.6
Q ss_pred CCceeeCcceeEEEEcCC----ceEEEEcCC---cEEEeCEEEEecChhh
Q 024393 15 GLDIRLGHRVTKITRHYI----GVKVTVEGG---KTFVADAVVVAVPLGV 57 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~----~v~v~~~~g---~~~~ad~VI~a~p~~~ 57 (268)
+++|+++++|++|+.+++ ++.+++.++ ++++||+||.|.-...
T Consensus 134 gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~~~~~~~i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 134 GGAIRFGTRLLSFRQHDDDAGAGVTARLAGPDGEYDLRAGYLVGADGNRS 183 (535)
T ss_dssp TCEEESSCEEEEEEEECGGGCSEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred CCEEEeCCEEEEEEECCCCccccEEEEEEcCCCeEEEEeCEEEECCCCcc
Confidence 578999999999999888 888877766 7899999999987653
No 38
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=96.50 E-value=0.0014 Score=55.70 Aligned_cols=55 Identities=22% Similarity=0.134 Sum_probs=35.9
Q ss_pred CCCChHHHHHHHhcCC--ceeeCcceeEEEEcCCceEEEEcCCcEEEeCEEEEecCh
Q 024393 1 MVRGYLPVINTLAKGL--DIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 55 (268)
Q Consensus 1 ~~gG~~~l~~~l~~~l--~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~ 55 (268)
++|||++|+++|++.+ +|++|++|++|...++++.+...+......-+|.+.+-+
T Consensus 315 i~GG~~~l~~~l~~~l~~~i~l~~~V~~I~~~~~gv~v~~~~~~~~~g~~~~~~~~~ 371 (376)
T 2e1m_A 315 IEGGSRMLPETLAKDLRDQIVMGQRMVRLEYYDPGRDGHHGELTGPGGPAVAIQTVP 371 (376)
T ss_dssp ETTCTTHHHHHHHHHGGGTEECSEEEEEEEECCCC-------------CCEEEEEEE
T ss_pred ECCcHHHHHHHHHHhcCCcEEecCeEEEEEECCCceEEEeCCCcCCCCCeeEEEecC
Confidence 4799999999999988 599999999999988887765544334455567666543
No 39
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=96.39 E-value=0.079 Score=45.25 Aligned_cols=43 Identities=21% Similarity=0.213 Sum_probs=35.5
Q ss_pred CCceeeCcceeEEEEcCCc--eEEEEcCCc--EEEeCEEEEecChhh
Q 024393 15 GLDIRLGHRVTKITRHYIG--VKVTVEGGK--TFVADAVVVAVPLGV 57 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~--v~v~~~~g~--~~~ad~VI~a~p~~~ 57 (268)
+++|+++++|++|+.++++ +.+.+.+|+ +++||.||.|.-...
T Consensus 120 gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~s 166 (421)
T 3nix_A 120 GVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGYGR 166 (421)
T ss_dssp TCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCGGGC
T ss_pred CCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCCCch
Confidence 6789999999999988776 456667887 699999999987653
No 40
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=96.31 E-value=0.35 Score=42.55 Aligned_cols=43 Identities=37% Similarity=0.387 Sum_probs=36.6
Q ss_pred CCceeeCcceeEEEEcCCceEEEEcCCc---EEEeCEEEEecChhh
Q 024393 15 GLDIRLGHRVTKITRHYIGVKVTVEGGK---TFVADAVVVAVPLGV 57 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~v~~~~g~---~~~ad~VI~a~p~~~ 57 (268)
+++|+++++|++|+.++++|.|++.++. +++||+||.|.-.+.
T Consensus 120 gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S 165 (500)
T 2qa1_A 120 GADIRRGHEVLSLTDDGAGVTVEVRGPEGKHTLRAAYLVGCDGGRS 165 (500)
T ss_dssp TCEEEETCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECCCTTC
T ss_pred CCEEECCcEEEEEEEcCCeEEEEEEcCCCCEEEEeCEEEECCCcch
Confidence 5789999999999999888888877664 789999999887654
No 41
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=96.27 E-value=0.091 Score=44.34 Aligned_cols=43 Identities=14% Similarity=0.097 Sum_probs=34.9
Q ss_pred CCceeeCcceeEEEEcCCceE-EEEc---CCcEEEeCEEEEecChhh
Q 024393 15 GLDIRLGHRVTKITRHYIGVK-VTVE---GGKTFVADAVVVAVPLGV 57 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~-v~~~---~g~~~~ad~VI~a~p~~~ 57 (268)
+++|+++++|++|+.+++++. |++. ++++++||.||.|.-...
T Consensus 116 gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s 162 (397)
T 3cgv_A 116 GADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp TCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred CCEEEECCEEEEEEEeCCEEEEEEEEECCeEEEEEcCEEEECCCcch
Confidence 678999999999999888776 6663 446899999999986543
No 42
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=96.13 E-value=0.072 Score=46.21 Aligned_cols=43 Identities=21% Similarity=0.021 Sum_probs=34.7
Q ss_pred CCceeeCcceeEEEEcCCceE-EEEc---CCc--EEEeCEEEEecChhh
Q 024393 15 GLDIRLGHRVTKITRHYIGVK-VTVE---GGK--TFVADAVVVAVPLGV 57 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~-v~~~---~g~--~~~ad~VI~a~p~~~ 57 (268)
+++|+++++|++|..+++++. |++. +|+ ++.||.||.|.-...
T Consensus 114 gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s 162 (453)
T 3atr_A 114 GVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKVVVEATGYSR 162 (453)
T ss_dssp TCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSEEEECCGGGC
T ss_pred CCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCEEEECcCCch
Confidence 578999999999998888754 4443 675 789999999997764
No 43
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=96.04 E-value=0.079 Score=47.80 Aligned_cols=43 Identities=30% Similarity=0.278 Sum_probs=34.6
Q ss_pred CCceeeCcceeEEEEcC-CceEEEEc-CC--cEEEeCEEEEecChhh
Q 024393 15 GLDIRLGHRVTKITRHY-IGVKVTVE-GG--KTFVADAVVVAVPLGV 57 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~-~~v~v~~~-~g--~~~~ad~VI~a~p~~~ 57 (268)
+++|+.+++|++|..++ +.+.|++. +| +++.||.||.|.-...
T Consensus 142 Gv~i~~g~~V~~v~~~~g~~~~V~~~~~G~~~~i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 142 GITVHEETPVTDVDLSDPDRVVLTVRRGGESVTVESDFVIDAGGSGG 188 (591)
T ss_dssp TCEEETTCCEEEEECCSTTCEEEEEEETTEEEEEEESEEEECCGGGC
T ss_pred CCEEEeCCEEEEEEEcCCCEEEEEEecCCceEEEEcCEEEECCCCcc
Confidence 67899999999999864 45677776 66 5799999999997653
No 44
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=96.02 E-value=0.014 Score=50.29 Aligned_cols=43 Identities=21% Similarity=0.302 Sum_probs=38.7
Q ss_pred CCceeeCc---ceeEEEEcCCceE-EEEcCCcEEEeCEEEEecChhh
Q 024393 15 GLDIRLGH---RVTKITRHYIGVK-VTVEGGKTFVADAVVVAVPLGV 57 (268)
Q Consensus 15 ~l~i~~~~---~V~~I~~~~~~v~-v~~~~g~~~~ad~VI~a~p~~~ 57 (268)
+++|++++ +|++|..+++++. |++.+|+++.||.||+|+-...
T Consensus 175 Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s 221 (438)
T 3dje_A 175 GVKFVTGTPQGRVVTLIFENNDVKGAVTADGKIWRAERTFLCAGASA 221 (438)
T ss_dssp TCEEEESTTTTCEEEEEEETTEEEEEEETTTEEEECSEEEECCGGGG
T ss_pred CCEEEeCCcCceEEEEEecCCeEEEEEECCCCEEECCEEEECCCCCh
Confidence 67899999 9999999888887 9998998899999999998764
No 45
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=95.87 E-value=0.082 Score=44.41 Aligned_cols=38 Identities=21% Similarity=0.383 Sum_probs=30.9
Q ss_pred CCeeeeecccCC---CCCccchhhHHHHHHHHHHHHHHHHH
Q 024393 204 DNLFFAGEATSM---SYPGSVHGAFSTGLMAAEDCRMRVLE 241 (268)
Q Consensus 204 ~~l~~aG~~~~~---~~~g~~~gA~~Sg~~aa~~i~~~l~~ 241 (268)
+|++++||..+. -.+.+++-|+.+|..+|+.|.+.+..
T Consensus 277 ~~v~lvGDAA~~~~P~~G~Gi~~A~~~g~~~A~~i~~~l~~ 317 (397)
T 3oz2_A 277 PGLMLVGDAARLIDPITGGGIANAIVSGMYAAQVTKEAIES 317 (397)
T ss_dssp TTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeEEEcccccccCCCCcchhHHHHHHHHHHHHHHHHHHHHc
Confidence 689999999753 34468999999999999999876554
No 46
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=95.75 E-value=0.3 Score=43.79 Aligned_cols=43 Identities=30% Similarity=0.261 Sum_probs=36.5
Q ss_pred CCceeeCcceeEEEEcCCceEEEE--cCC-cEEEeCEEEEecChhh
Q 024393 15 GLDIRLGHRVTKITRHYIGVKVTV--EGG-KTFVADAVVVAVPLGV 57 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~v~~--~~g-~~~~ad~VI~a~p~~~ 57 (268)
+++|+++++|++|+.+++++.|++ .+| ++++||.||.|.-...
T Consensus 162 gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~~~a~~vV~ADG~~S 207 (570)
T 3fmw_A 162 GAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYPVRARYGVGCDGGRS 207 (570)
T ss_dssp TEECCBSCEEEECCBCSSCEEEEEEETTEEEEEEESEEEECSCSSC
T ss_pred CCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEEEEeCEEEEcCCCCc
Confidence 568999999999999888888777 677 6899999999886653
No 47
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=95.73 E-value=0.066 Score=47.34 Aligned_cols=43 Identities=21% Similarity=0.124 Sum_probs=34.4
Q ss_pred CCceeeCcceeEEEEcCCce---EEEEcCCc--EEEeCEEEEecChhh
Q 024393 15 GLDIRLGHRVTKITRHYIGV---KVTVEGGK--TFVADAVVVAVPLGV 57 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v---~v~~~~g~--~~~ad~VI~a~p~~~ 57 (268)
+++|+++++|++|..+++++ .+.+.+|+ ++.||.||.|.-...
T Consensus 125 Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~S 172 (512)
T 3e1t_A 125 GVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHARFIVDASGNRT 172 (512)
T ss_dssp TCEEESSCEEEEEEEETTEEEEEEEECSSSCEEEEEEEEEEECCCTTC
T ss_pred CCEEEcCCEEEEEEEECCEEEEEEEEeCCCCEEEEEcCEEEECCCcch
Confidence 67899999999999988764 34445674 789999999997754
No 48
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=95.71 E-value=0.016 Score=48.77 Aligned_cols=42 Identities=19% Similarity=0.149 Sum_probs=37.2
Q ss_pred CCceeeCcceeEEEEcCCceEEEEcCCcEEEeCEEEEecChhh
Q 024393 15 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGV 57 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~ 57 (268)
+++|+++++|++|..+++++.|++.+| ++.||.||+|+-...
T Consensus 168 Gv~i~~~~~V~~i~~~~~~~~V~t~~g-~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 168 QGQVLCNHEALEIRRVDGAWEVRCDAG-SYRAAVLVNAAGAWC 209 (381)
T ss_dssp TCEEESSCCCCEEEEETTEEEEECSSE-EEEESEEEECCGGGH
T ss_pred CCEEEcCCEEEEEEEeCCeEEEEeCCC-EEEcCEEEECCChhH
Confidence 678999999999999888888888777 899999999997753
No 49
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=95.69 E-value=0.022 Score=52.25 Aligned_cols=43 Identities=19% Similarity=0.193 Sum_probs=38.9
Q ss_pred CCceeeCcceeEEEEcCCceEEEEcCCcEEEeCEEEEecChhh
Q 024393 15 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGV 57 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~ 57 (268)
+++|+++++|++|..++++|.|.+.+|+++.||.||+|+-...
T Consensus 431 Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~i~Ad~VVlAtG~~s 473 (676)
T 3ps9_A 431 GLQIYYQYQLQNFSRKDDCWLLNFAGDQQATHSVVVLANGHQI 473 (676)
T ss_dssp TCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCGGGG
T ss_pred CCEEEeCCeeeEEEEeCCeEEEEECCCCEEECCEEEECCCcch
Confidence 6789999999999999999999998888899999999998763
No 50
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=95.38 E-value=0.03 Score=51.53 Aligned_cols=43 Identities=14% Similarity=0.194 Sum_probs=37.8
Q ss_pred CCceeeCcceeEEEEcCCceEEEEcCCc-EEEeCEEEEecChhh
Q 024393 15 GLDIRLGHRVTKITRHYIGVKVTVEGGK-TFVADAVVVAVPLGV 57 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~v~~~~g~-~~~ad~VI~a~p~~~ 57 (268)
+++|+++++|++|..++++|.|.+.+|+ ++.||.||+|+....
T Consensus 426 Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~~i~Ad~VVlAtG~~s 469 (689)
T 3pvc_A 426 GMTCHYQHELQRLKRIDSQWQLTFGQSQAAKHHATVILATGHRL 469 (689)
T ss_dssp TCEEEESCCEEEEEECSSSEEEEEC-CCCCEEESEEEECCGGGT
T ss_pred CCEEEeCCeEeEEEEeCCeEEEEeCCCcEEEECCEEEECCCcch
Confidence 6789999999999999888999988887 899999999998763
No 51
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=95.33 E-value=0.04 Score=45.93 Aligned_cols=43 Identities=14% Similarity=0.159 Sum_probs=36.9
Q ss_pred CCceeeCcceeEEEEcCCc-eEEEEcCC--cEEEeCEEEEecChhh
Q 024393 15 GLDIRLGHRVTKITRHYIG-VKVTVEGG--KTFVADAVVVAVPLGV 57 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~-v~v~~~~g--~~~~ad~VI~a~p~~~ 57 (268)
+++|+++++|++|+.++++ +.|.+.+| .++.||.||+|+-...
T Consensus 164 Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~a~~VV~A~G~~s 209 (369)
T 3dme_A 164 GAQLVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGLHA 209 (369)
T ss_dssp TCEEECSCCEEEEEECTTSSEEEEECTTSCEEEEEEEEEECCGGGH
T ss_pred CCEEECCCEEEEEEEcCCceEEEEECCCceeEEEeCEEEECCCcch
Confidence 5789999999999998766 88888887 4899999999997753
No 52
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=95.14 E-value=0.041 Score=46.94 Aligned_cols=42 Identities=24% Similarity=0.276 Sum_probs=38.2
Q ss_pred CceeeCcceeEEEEcCCceEEEEcCCcEEEeCEEEEecChhh
Q 024393 16 LDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGV 57 (268)
Q Consensus 16 l~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~ 57 (268)
++|+++++|++|+.+++++.|++.+|++++||.||.|.-...
T Consensus 140 ~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~a~~vV~AdG~~S 181 (407)
T 3rp8_A 140 DSVQFGKRVTRCEEDADGVTVWFTDGSSASGDLLIAADGSHS 181 (407)
T ss_dssp GGEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCCTTC
T ss_pred CEEEECCEEEEEEecCCcEEEEEcCCCEEeeCEEEECCCcCh
Confidence 689999999999999999999999999999999999987653
No 53
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=94.95 E-value=0.041 Score=46.80 Aligned_cols=50 Identities=16% Similarity=0.288 Sum_probs=41.2
Q ss_pred HHHHHhc--CCceeeCcceeEEEEcCCce--EEEEcCCcEEEeCEEEEecChhh
Q 024393 8 VINTLAK--GLDIRLGHRVTKITRHYIGV--KVTVEGGKTFVADAVVVAVPLGV 57 (268)
Q Consensus 8 l~~~l~~--~l~i~~~~~V~~I~~~~~~v--~v~~~~g~~~~ad~VI~a~p~~~ 57 (268)
|.+.+.+ +++|+++++|++|+.+++++ .|++.+|++++||.||.|.-...
T Consensus 113 L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~vV~AdG~~s 166 (399)
T 2x3n_A 113 VLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVGADGIAS 166 (399)
T ss_dssp HHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECCCTTC
T ss_pred HHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECCEEEECCCCCh
Confidence 4444444 47899999999999988888 89888888999999999987654
No 54
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=94.90 E-value=0.052 Score=46.72 Aligned_cols=50 Identities=30% Similarity=0.411 Sum_probs=40.8
Q ss_pred HHHHHHHhc-----CCceeeCcceeEEEEcCCceEEEEcCCcEEEeCEEEEecChh
Q 024393 6 LPVINTLAK-----GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 56 (268)
Q Consensus 6 ~~l~~~l~~-----~l~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~ 56 (268)
..+.+.|.+ +++|+++++|++|..+++++.|.+.+| ++.||.||+|+-..
T Consensus 132 ~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~~g-~i~ad~VIlAtG~~ 186 (417)
T 3v76_A 132 KDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTTSAG-TVDAASLVVASGGK 186 (417)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTE-EEEESEEEECCCCS
T ss_pred HHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCc-EEEeeEEEECCCCc
Confidence 345555543 578999999999999888899988887 89999999998654
No 55
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=94.80 E-value=0.063 Score=44.98 Aligned_cols=42 Identities=24% Similarity=0.272 Sum_probs=36.7
Q ss_pred CCceeeCcceeEEEEcCCceEEEEcCCcEEEeCEEEEecChhh
Q 024393 15 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGV 57 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~ 57 (268)
+++|+++++|++|+.+++++.|++.+| ++.||.||+|+....
T Consensus 163 G~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s 204 (372)
T 2uzz_A 163 GCAQLFNCPVTAIRHDDDGVTIETADG-EYQAKKAIVCAGTWV 204 (372)
T ss_dssp TCEEECSCCEEEEEECSSSEEEEESSC-EEEEEEEEECCGGGG
T ss_pred CCEEEcCCEEEEEEEcCCEEEEEECCC-eEEcCEEEEcCCccH
Confidence 578999999999999888888888777 599999999998764
No 56
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=94.68 E-value=0.089 Score=44.53 Aligned_cols=48 Identities=27% Similarity=0.392 Sum_probs=39.6
Q ss_pred HHHHHh-cCCceeeCcceeEEEEcCCceEEEEcCCcEEEeCEEEEecCh
Q 024393 8 VINTLA-KGLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 55 (268)
Q Consensus 8 l~~~l~-~~l~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~ 55 (268)
+.+.|. .+++|+++++|.+|+.+++++.+.+.+|+++.+|.||+|+..
T Consensus 193 l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vv~a~G~ 241 (384)
T 2v3a_A 193 VQAGLEGLGVRFHLGPVLASLKKAGEGLEAHLSDGEVIPCDLVVSAVGL 241 (384)
T ss_dssp HHHHHHTTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECSCE
T ss_pred HHHHHHHcCCEEEeCCEEEEEEecCCEEEEEECCCCEEECCEEEECcCC
Confidence 344443 367899999999999887778888888989999999999875
No 57
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=94.62 E-value=0.068 Score=39.83 Aligned_cols=39 Identities=21% Similarity=0.221 Sum_probs=34.3
Q ss_pred CCceeeCcceeEEEEcCCceEEEEcCCcEEEeCEEEEecCh
Q 024393 15 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 55 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~ 55 (268)
+++++++ +|++|+.+++++.+++.+| ++.+|.||+|+-.
T Consensus 70 gv~v~~~-~v~~i~~~~~~~~v~~~~g-~i~ad~vI~A~G~ 108 (180)
T 2ywl_A 70 GAEVRPG-VVKGVRDMGGVFEVETEEG-VEKAERLLLCTHK 108 (180)
T ss_dssp TCEEEEC-CCCEEEECSSSEEEECSSC-EEEEEEEEECCTT
T ss_pred CCEEEeC-EEEEEEEcCCEEEEEECCC-EEEECEEEECCCC
Confidence 5789999 9999998888888888888 8999999999875
No 58
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=94.59 E-value=0.068 Score=46.34 Aligned_cols=51 Identities=25% Similarity=0.309 Sum_probs=40.3
Q ss_pred HHHHHHHhc-----CCceeeCcceeEEEEcCCc-eEEEEcCCcEEEeCEEEEecChh
Q 024393 6 LPVINTLAK-----GLDIRLGHRVTKITRHYIG-VKVTVEGGKTFVADAVVVAVPLG 56 (268)
Q Consensus 6 ~~l~~~l~~-----~l~i~~~~~V~~I~~~~~~-v~v~~~~g~~~~ad~VI~a~p~~ 56 (268)
..+.+.|.+ +++|+++++|++|..++++ +.|.+.+|+++.||.||+|+-..
T Consensus 134 ~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G~~i~Ad~VVlAtGg~ 190 (447)
T 2i0z_A 134 QSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTGEVLETNHVVIAVGGK 190 (447)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTCCEEECSCEEECCCCS
T ss_pred HHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCCCEEECCEEEECCCCC
Confidence 445555543 5689999999999988777 67888888789999999998543
No 59
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=94.57 E-value=0.074 Score=44.78 Aligned_cols=41 Identities=20% Similarity=0.088 Sum_probs=36.0
Q ss_pred CCceeeCcceeEEEEcCCceE-EEEcCCcEEEeCEEEEecChh
Q 024393 15 GLDIRLGHRVTKITRHYIGVK-VTVEGGKTFVADAVVVAVPLG 56 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~-v~~~~g~~~~ad~VI~a~p~~ 56 (268)
+++|+++++|++|+.+++++. |++.+| ++.||.||+|+-..
T Consensus 163 Gv~i~~~~~v~~i~~~~~~v~gv~~~~g-~i~a~~VV~A~G~~ 204 (382)
T 1y56_B 163 GAKLLEYTEVKGFLIENNEIKGVKTNKG-IIKTGIVVNATNAW 204 (382)
T ss_dssp TCEEECSCCEEEEEESSSBEEEEEETTE-EEECSEEEECCGGG
T ss_pred CCEEECCceEEEEEEECCEEEEEEECCc-EEECCEEEECcchh
Confidence 578999999999999888877 888777 89999999999765
No 60
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=94.53 E-value=0.085 Score=46.25 Aligned_cols=42 Identities=24% Similarity=0.292 Sum_probs=37.9
Q ss_pred CCceeeCcceeEEEEcCCceEEEEcCCcEEEeCEEEEecChh
Q 024393 15 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 56 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~ 56 (268)
+++|+++++|++|+.+++++.|.+.+|+++.+|.||+++...
T Consensus 246 Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vi~A~G~~ 287 (484)
T 3o0h_A 246 GISIIYEATVSQVQSTENCYNVVLTNGQTICADRVMLATGRV 287 (484)
T ss_dssp TCEEESSCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEE
T ss_pred CCEEEeCCEEEEEEeeCCEEEEEECCCcEEEcCEEEEeeCCC
Confidence 688999999999999888888989899899999999999753
No 61
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=94.48 E-value=0.082 Score=44.81 Aligned_cols=41 Identities=37% Similarity=0.464 Sum_probs=35.5
Q ss_pred CCceeeCcceeEEEEcCCceEEEEcCCcEEEeCEEEEecChh
Q 024393 15 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 56 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~ 56 (268)
+++|+++++|++|..+++++.|.+.+| ++.||.||+|+-..
T Consensus 167 Gv~i~~~~~V~~i~~~~~~v~v~t~~g-~i~a~~VV~A~G~~ 207 (397)
T 2oln_A 167 GATLRAGETVTELVPDADGVSVTTDRG-TYRAGKVVLACGPY 207 (397)
T ss_dssp TCEEEESCCEEEEEEETTEEEEEESSC-EEEEEEEEECCGGG
T ss_pred CCEEECCCEEEEEEEcCCeEEEEECCC-EEEcCEEEEcCCcC
Confidence 578999999999999888888877666 79999999999764
No 62
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=94.38 E-value=0.058 Score=45.40 Aligned_cols=181 Identities=15% Similarity=0.081 Sum_probs=93.5
Q ss_pred CCceeeCcceeEEEEcCCceEEEEcCCcEEEeCEEEEecChhhhhcCcccccCCCcHHHHHHHhhcCCccccEEEEEeCC
Q 024393 15 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDDLGVGIENKIIMHFDK 94 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~l~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (268)
+++|+++++|++|..+++++.|.+.+| ++.||.||+|+...... +...+.. .+...+.....+.++.
T Consensus 178 g~~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~s~~-l~~~~~~-----------~~~~~~~~g~~~~~~~ 244 (382)
T 1ryi_A 178 GAEIFEHTPVLHVERDGEALFIKTPSG-DVWANHVVVASGVWSGM-FFKQLGL-----------NNAFLPVKGECLSVWN 244 (382)
T ss_dssp TCEEETTCCCCEEECSSSSEEEEETTE-EEEEEEEEECCGGGTHH-HHHHTTC-----------CCCCEEEEEEEEEEEC
T ss_pred CCEEEcCCcEEEEEEECCEEEEEcCCc-eEEcCEEEECCChhHHH-HHHhcCC-----------CCceeccceEEEEECC
Confidence 578999999999998888888888777 89999999999874311 0000000 0112222223333332
Q ss_pred CC-CCCCccceeecCCCCceeEEEeccccCCccEEEEEeccchHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCcEEEEcc
Q 024393 95 VF-WPNVEFLGVVSDTSYGCSYFLNLHKATGHCVLVYMPAGQLARDIEKMSDEAAANFAFTQLKKILPDASSPIQYLVSH 173 (268)
Q Consensus 95 ~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~e~~~~i~~~l~~~~p~~~~~~~~~~~~ 173 (268)
+. +... .+.. + ..++.. .+++ .+++..... . ..+....+++..+.+++.+.+++|..... .+ ...
T Consensus 245 ~~~~~~~----~~~~-~--~~~~~p--~~~g-~~~vG~~~~-~-~~~~~~~~~~~~~~l~~~~~~~~p~l~~~-~~-~~~ 310 (382)
T 1ryi_A 245 DDIPLTK----TLYH-D--HCYIVP--RKSG-RLVVGATMK-P-GDWSETPDLGGLESVMKKAKTMLPAIQNM-KV-DRF 310 (382)
T ss_dssp CSSCCCS----EEEE-T--TEEEEE--CTTS-EEEEECCCE-E-TCCCCSCCHHHHHHHHHHHHHHCGGGGGS-EE-EEE
T ss_pred CCCCccc----eEEc-C--CEEEEE--cCCC-eEEEeeccc-c-cCCCCCCCHHHHHHHHHHHHHhCCCcCCC-ce-eeE
Confidence 21 1010 0111 1 112111 1222 233322111 1 11222344667888999999999973221 22 233
Q ss_pred cCCCcCCCcccCcCCCCCChHHHHHhc-CC-CCCeeeeecccCCCCCccchhhHHHHHHHHHHHHH
Q 024393 174 WGTDANSLGSYSYDTVGKSHDLYERLR-IP-VDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 237 (268)
Q Consensus 174 w~~~~~~~g~~~~~~~~~~~~~~~~~~-~p-~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i~~ 237 (268)
|. |.+.. .++.. +... .| .+|+|+++.... .++..|..+|..+|+.|..
T Consensus 311 w~------g~~~~-t~d~~----p~ig~~~~~~~l~~~~G~~g----~G~~~a~~~g~~la~~i~~ 361 (382)
T 1ryi_A 311 WA------GLRPG-TKDGK----PYIGRHPEDSRILFAAGHFR----NGILLAPATGALISDLIMN 361 (382)
T ss_dssp EE------EEEEE-CSSSC----CEEEEETTEEEEEEEECCSS----CTTTTHHHHHHHHHHHHTT
T ss_pred EE------Eeccc-CCCCC----cEeccCCCcCCEEEEEcCCc----chHHHhHHHHHHHHHHHhC
Confidence 41 11111 11110 1111 12 468998876543 3688899999999998864
No 63
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=94.37 E-value=0.097 Score=45.65 Aligned_cols=41 Identities=20% Similarity=0.298 Sum_probs=36.8
Q ss_pred CCceeeCcceeEEEEcCCceEEEEcCCcEEEeCEEEEecCh
Q 024393 15 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 55 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~ 55 (268)
+++|+++++|++|+.+++++.+.+.+|+++.+|.||+++..
T Consensus 216 GV~i~~~~~v~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~ 256 (472)
T 3iwa_A 216 DVVVHTGEKVVRLEGENGKVARVITDKRTLDADLVILAAGV 256 (472)
T ss_dssp TCEEECSCCEEEEEESSSBEEEEEESSCEEECSEEEECSCE
T ss_pred CCEEEeCCEEEEEEccCCeEEEEEeCCCEEEcCEEEECCCC
Confidence 67899999999999878888888888989999999999875
No 64
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=94.32 E-value=0.11 Score=44.04 Aligned_cols=51 Identities=12% Similarity=0.038 Sum_probs=42.2
Q ss_pred HHHHHHhc---CCceeeCcceeEEEEcCCceEEEEcCCcEEEeCEEEEecChhh
Q 024393 7 PVINTLAK---GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGV 57 (268)
Q Consensus 7 ~l~~~l~~---~l~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~ 57 (268)
.+.+.|.+ +++|+++++|++|+.+++++.|++.+|+++.||.||.|.-.+.
T Consensus 100 ~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S 153 (397)
T 2vou_A 100 SIYGGLYELFGPERYHTSKCLVGLSQDSETVQMRFSDGTKAEANWVIGADGGAS 153 (397)
T ss_dssp HHHHHHHHHHCSTTEETTCCEEEEEECSSCEEEEETTSCEEEESEEEECCCTTC
T ss_pred HHHHHHHHhCCCcEEEcCCEEEEEEecCCEEEEEECCCCEEECCEEEECCCcch
Confidence 34444433 6789999999999999888999999998999999999987654
No 65
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=94.30 E-value=0.093 Score=44.61 Aligned_cols=51 Identities=14% Similarity=0.018 Sum_probs=42.0
Q ss_pred HHHHHHhcC---CceeeCcceeEEEEcCCceEEEEcCCcEEEeCEEEEecChhh
Q 024393 7 PVINTLAKG---LDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGV 57 (268)
Q Consensus 7 ~l~~~l~~~---l~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~ 57 (268)
.|.+.|.+. .+|+++++|++|+.+++++.|++.+|++++||.||.|.-...
T Consensus 129 ~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S 182 (398)
T 2xdo_A 129 DLRAILLNSLENDTVIWDRKLVMLEPGKKKWTLTFENKPSETADLVILANGGMS 182 (398)
T ss_dssp HHHHHHHHTSCTTSEEESCCEEEEEECSSSEEEEETTSCCEEESEEEECSCTTC
T ss_pred HHHHHHHhhcCCCEEEECCEEEEEEECCCEEEEEECCCcEEecCEEEECCCcch
Confidence 344555544 479999999999998888999998998899999999987754
No 66
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=94.22 E-value=0.099 Score=46.00 Aligned_cols=42 Identities=24% Similarity=0.332 Sum_probs=36.8
Q ss_pred CCceeeCcceeEEEEcCCceEEEEcCCcEEEeCEEEEecChh
Q 024393 15 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 56 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~ 56 (268)
+++|+++++|++|+.+++++.+.+.+|+++.+|.||+++...
T Consensus 237 GV~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~ 278 (499)
T 1xdi_A 237 GVRLFKNARAASVTRTGAGVLVTMTDGRTVEGSHALMTIGSV 278 (499)
T ss_dssp TCEEETTCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEE
T ss_pred CCEEEeCCEEEEEEEeCCEEEEEECCCcEEEcCEEEECCCCC
Confidence 678999999999998877788888888899999999998653
No 67
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=94.14 E-value=0.098 Score=44.05 Aligned_cols=42 Identities=21% Similarity=0.288 Sum_probs=36.1
Q ss_pred CCceeeCcceeEEEEcCCceEEEEcCCcEEEeCEEEEecChhh
Q 024393 15 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGV 57 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~ 57 (268)
+++|+++++|++|+.+++++.|.+.+| ++.||.||+|+....
T Consensus 164 Gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~~ 205 (389)
T 2gf3_A 164 GAKVLTHTRVEDFDISPDSVKIETANG-SYTADKLIVSMGAWN 205 (389)
T ss_dssp TCEEECSCCEEEEEECSSCEEEEETTE-EEEEEEEEECCGGGH
T ss_pred CCEEEcCcEEEEEEecCCeEEEEeCCC-EEEeCEEEEecCccH
Confidence 578999999999999888888888666 799999999997653
No 68
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=94.08 E-value=0.13 Score=44.03 Aligned_cols=41 Identities=29% Similarity=0.462 Sum_probs=36.4
Q ss_pred CCceeeCcceeEEEEcCCce-EEEEcCCcEEEeCEEEEecCh
Q 024393 15 GLDIRLGHRVTKITRHYIGV-KVTVEGGKTFVADAVVVAVPL 55 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v-~v~~~~g~~~~ad~VI~a~p~ 55 (268)
+++|++++.|++|+.+++++ .|.+.+|+++.||.||+++..
T Consensus 208 GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv~a~G~ 249 (415)
T 3lxd_A 208 GVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIVGIGI 249 (415)
T ss_dssp TCEEEETCCEEEEEESSSBEEEEEESSSCEEECSEEEECSCC
T ss_pred CCEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECCCC
Confidence 67899999999999887776 588889999999999999875
No 69
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=93.99 E-value=0.11 Score=46.39 Aligned_cols=42 Identities=29% Similarity=0.374 Sum_probs=36.6
Q ss_pred CCceeeCcceeEEEEcCCceE-EEEcCCcEEEeCEEEEecChh
Q 024393 15 GLDIRLGHRVTKITRHYIGVK-VTVEGGKTFVADAVVVAVPLG 56 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~-v~~~~g~~~~ad~VI~a~p~~ 56 (268)
+++|+++++|++|..+++++. |.+.+|+++.||.||+|+-..
T Consensus 234 Gv~I~~~t~V~~I~~~~~~v~gV~l~~G~~i~Ad~VVlA~G~~ 276 (549)
T 3nlc_A 234 GGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSRHVVLAVGHS 276 (549)
T ss_dssp TCEEESSCCEEEEEESSSBEEEEEETTSCEEECSCEEECCCTT
T ss_pred CCEEEeCCEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCC
Confidence 578999999999999888755 888889899999999998654
No 70
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=93.94 E-value=0.13 Score=43.79 Aligned_cols=41 Identities=34% Similarity=0.475 Sum_probs=36.2
Q ss_pred CCceeeCcceeEEEEcCCceE-EEEcCCcEEEeCEEEEecCh
Q 024393 15 GLDIRLGHRVTKITRHYIGVK-VTVEGGKTFVADAVVVAVPL 55 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~-v~~~~g~~~~ad~VI~a~p~ 55 (268)
+++|+++++|++|+.+++++. |.+.+|+++.||.||+++..
T Consensus 198 GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~Vv~a~G~ 239 (404)
T 3fg2_P 198 GIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVVVGVGV 239 (404)
T ss_dssp TCEEECSCCEEEEEEETTEEEEEEETTSCEEECSEEEECCCE
T ss_pred CcEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECcCC
Confidence 678999999999998877754 88889999999999999875
No 71
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=93.92 E-value=0.13 Score=44.52 Aligned_cols=42 Identities=45% Similarity=0.634 Sum_probs=36.9
Q ss_pred CCceeeCcceeEEEEcCCceEEEEcCCcEEEeCEEEEecChh
Q 024393 15 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 56 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~ 56 (268)
+++|+++++|++|+.+++++.+.+.+|+++.+|.||+|+...
T Consensus 222 Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~~D~vv~A~G~~ 263 (455)
T 2yqu_A 222 GLTIRTGVRVTAVVPEAKGARVELEGGEVLEADRVLVAVGRR 263 (455)
T ss_dssp TCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEE
T ss_pred CCEEEECCEEEEEEEeCCEEEEEECCCeEEEcCEEEECcCCC
Confidence 678999999999998887788888788899999999998654
No 72
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=93.67 E-value=0.17 Score=44.46 Aligned_cols=42 Identities=19% Similarity=0.264 Sum_probs=36.9
Q ss_pred CCceeeCcceeEEEEcCCceEEEEcCCcEEEeCEEEEecChh
Q 024393 15 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 56 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~ 56 (268)
+++|++++.|++|+.+++++.|++.+|+++.||.||+++...
T Consensus 240 GV~v~~~~~V~~i~~~~~~~~v~l~dG~~i~aD~Vv~a~G~~ 281 (493)
T 1m6i_A 240 GVKVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGLE 281 (493)
T ss_dssp TCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECCCEE
T ss_pred CCEEEeCCEEEEEEecCCeEEEEECCCCEEECCEEEECCCCC
Confidence 578999999999998777778888899999999999998753
No 73
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=93.39 E-value=0.16 Score=43.40 Aligned_cols=42 Identities=26% Similarity=0.426 Sum_probs=36.1
Q ss_pred CCceeeCcceeEEEEcCCceEEEEcCCcEEEeCEEEEecChh
Q 024393 15 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 56 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~ 56 (268)
+++|++++.|++|+.+++...|.+.+|+++.||.||+++...
T Consensus 199 GV~i~~~~~v~~i~~~~~~~~v~~~dg~~i~aD~Vv~a~G~~ 240 (410)
T 3ef6_A 199 GVQVELGTGVVGFSGEGQLEQVMASDGRSFVADSALICVGAE 240 (410)
T ss_dssp TCEEECSCCEEEEECSSSCCEEEETTSCEEECSEEEECSCEE
T ss_pred CCEEEeCCEEEEEeccCcEEEEEECCCCEEEcCEEEEeeCCe
Confidence 678999999999997665457888899999999999998753
No 74
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=93.22 E-value=0.19 Score=42.88 Aligned_cols=41 Identities=20% Similarity=0.243 Sum_probs=34.3
Q ss_pred CCceeeCcceeEEEEc----CCceEEEEcCCcEEEeCEEEEecChh
Q 024393 15 GLDIRLGHRVTKITRH----YIGVKVTVEGGKTFVADAVVVAVPLG 56 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~----~~~v~v~~~~g~~~~ad~VI~a~p~~ 56 (268)
+++|+++++|++|..+ ++++.|.+.+| +++||.||+|+-..
T Consensus 123 Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~~g-~i~ad~VVlAtG~~ 167 (401)
T 2gqf_A 123 GAKILLRSEVSQVERIQNDEKVRFVLQVNST-QWQCKNLIVATGGL 167 (401)
T ss_dssp TCEEECSCCEEEEEECCSCSSCCEEEEETTE-EEEESEEEECCCCS
T ss_pred CCEEEeCCEEEEEEcccCcCCCeEEEEECCC-EEECCEEEECCCCc
Confidence 5789999999999977 56688887766 89999999998543
No 75
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=93.01 E-value=0.22 Score=43.28 Aligned_cols=48 Identities=21% Similarity=0.311 Sum_probs=38.9
Q ss_pred HHHHh-cCCceeeCcceeEEEEcCCceEEEEcCCc-EEEeCEEEEecChh
Q 024393 9 INTLA-KGLDIRLGHRVTKITRHYIGVKVTVEGGK-TFVADAVVVAVPLG 56 (268)
Q Consensus 9 ~~~l~-~~l~i~~~~~V~~I~~~~~~v~v~~~~g~-~~~ad~VI~a~p~~ 56 (268)
.+.|. .+++|+++++|++|+.+++++.|.+.+|+ ++.+|.||+++...
T Consensus 214 ~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~ 263 (463)
T 2r9z_A 214 AENMHAQGIETHLEFAVAALERDAQGTTLVAQDGTRLEGFDSVIWAVGRA 263 (463)
T ss_dssp HHHHHHTTCEEESSCCEEEEEEETTEEEEEETTCCEEEEESEEEECSCEE
T ss_pred HHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEeCCcEEEEcCEEEECCCCC
Confidence 34443 36789999999999987777888888898 89999999998653
No 76
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=92.97 E-value=0.28 Score=41.43 Aligned_cols=51 Identities=22% Similarity=0.223 Sum_probs=40.7
Q ss_pred HHHHHHhcCC--ceeeCcceeEEEEcCC-ceEEEEcCCcEEEeCEEEEecChhh
Q 024393 7 PVINTLAKGL--DIRLGHRVTKITRHYI-GVKVTVEGGKTFVADAVVVAVPLGV 57 (268)
Q Consensus 7 ~l~~~l~~~l--~i~~~~~V~~I~~~~~-~v~v~~~~g~~~~ad~VI~a~p~~~ 57 (268)
.|-+.|.+.+ +|+++++|++++..++ ++.|++.+|++++||.||-|--.+.
T Consensus 113 ~L~~~L~~~~~~~v~~~~~v~~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S 166 (412)
T 4hb9_A 113 ELKEILNKGLANTIQWNKTFVRYEHIENGGIKIFFADGSHENVDVLVGADGSNS 166 (412)
T ss_dssp HHHHHHHTTCTTTEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECCCTTC
T ss_pred HHHHHHHhhccceEEEEEEEEeeeEcCCCeEEEEECCCCEEEeeEEEECCCCCc
Confidence 3556666666 5999999999987654 6899999999999999988766553
No 77
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=92.96 E-value=0.23 Score=42.98 Aligned_cols=48 Identities=19% Similarity=0.228 Sum_probs=37.9
Q ss_pred HHHHHhc-CCceeeCcceeEEEEcCCceEEEEcCCcEEEeCEEEEecChh
Q 024393 8 VINTLAK-GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 56 (268)
Q Consensus 8 l~~~l~~-~l~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~ 56 (268)
+.+.|.+ +++|+++++|++|+..++++.|.+.+| ++.||.||+++...
T Consensus 195 l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g-~i~aD~Vv~A~G~~ 243 (452)
T 3oc4_A 195 VQKSLEKQAVIFHFEETVLGIEETANGIVLETSEQ-EISCDSGIFALNLH 243 (452)
T ss_dssp HHHHHHTTTEEEEETCCEEEEEECSSCEEEEESSC-EEEESEEEECSCCB
T ss_pred HHHHHHHcCCEEEeCCEEEEEEccCCeEEEEECCC-EEEeCEEEECcCCC
Confidence 3344433 578999999999998778887777766 89999999998754
No 78
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=92.95 E-value=0.26 Score=40.51 Aligned_cols=42 Identities=31% Similarity=0.409 Sum_probs=36.5
Q ss_pred CCceeeCcceeEEEEcCCceEEEEcCCcEEEeCEEEEecChh
Q 024393 15 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 56 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~ 56 (268)
++++++++.|.+|+.+++.+.|.+.+|+++.+|+||+|+-..
T Consensus 79 ~~~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 79 NPVYSLGERAETLEREGDLFKVTTSQGNAYTAKAVIIAAGVG 120 (335)
T ss_dssp CCEEEESCCEEEEEEETTEEEEEETTSCEEEEEEEEECCTTS
T ss_pred CCEEEeCCEEEEEEECCCEEEEEECCCCEEEeCEEEECCCCC
Confidence 457899999999998877888888888889999999999763
No 79
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=92.85 E-value=0.24 Score=43.46 Aligned_cols=49 Identities=18% Similarity=0.052 Sum_probs=39.2
Q ss_pred HHHHHhcCCceeeCcceeEEEEcCCceEEEEc--CC--cEEEeCEEEEecChh
Q 024393 8 VINTLAKGLDIRLGHRVTKITRHYIGVKVTVE--GG--KTFVADAVVVAVPLG 56 (268)
Q Consensus 8 l~~~l~~~l~i~~~~~V~~I~~~~~~v~v~~~--~g--~~~~ad~VI~a~p~~ 56 (268)
+.+.|.+.++|+++++|++|+.+++++.+.+. +| +++.+|.||+++...
T Consensus 221 l~~~l~~~V~i~~~~~v~~i~~~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~ 273 (492)
T 3ic9_A 221 AEKTFNEEFYFDAKARVISTIEKEDAVEVIYFDKSGQKTTESFQYVLAATGRK 273 (492)
T ss_dssp HHHHHHTTSEEETTCEEEEEEECSSSEEEEEECTTCCEEEEEESEEEECSCCE
T ss_pred HHHHHhhCcEEEECCEEEEEEEcCCEEEEEEEeCCCceEEEECCEEEEeeCCc
Confidence 44555555899999999999998888777764 67 678999999998653
No 80
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=92.83 E-value=0.28 Score=42.52 Aligned_cols=47 Identities=13% Similarity=0.309 Sum_probs=37.8
Q ss_pred HHHHh-cCCceeeCcceeEEEEcCCc-eEEEEcCCcEEEeCEEEEecCh
Q 024393 9 INTLA-KGLDIRLGHRVTKITRHYIG-VKVTVEGGKTFVADAVVVAVPL 55 (268)
Q Consensus 9 ~~~l~-~~l~i~~~~~V~~I~~~~~~-v~v~~~~g~~~~ad~VI~a~p~ 55 (268)
.+.|. .+++|+++++|.+|+.++++ +.+.+.+|+++.+|.||+++..
T Consensus 215 ~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~i~~D~vv~a~G~ 263 (450)
T 1ges_A 215 VEVMNAEGPQLHTNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAIGR 263 (450)
T ss_dssp HHHHHHHSCEEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCE
T ss_pred HHHHHHCCCEEEeCCEEEEEEEeCCcEEEEEECCCcEEEcCEEEECCCC
Confidence 34443 36789999999999987654 7788888888999999999864
No 81
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=92.80 E-value=0.18 Score=44.68 Aligned_cols=48 Identities=25% Similarity=0.413 Sum_probs=37.7
Q ss_pred HHHHHh-cCCceeeCcceeEEEEcCCc----eEEEEcCCc-EEEeCEEEEecCh
Q 024393 8 VINTLA-KGLDIRLGHRVTKITRHYIG----VKVTVEGGK-TFVADAVVVAVPL 55 (268)
Q Consensus 8 l~~~l~-~~l~i~~~~~V~~I~~~~~~----v~v~~~~g~-~~~ad~VI~a~p~ 55 (268)
+.+.|. .+++|+++++|++|+.++++ +.|.+.+|+ ++.||.||+|+..
T Consensus 261 l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~ 314 (523)
T 1mo9_A 261 VLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGE 314 (523)
T ss_dssp HHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCC
T ss_pred HHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCC
Confidence 344443 36789999999999986555 678888887 8999999999864
No 82
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=92.76 E-value=0.29 Score=43.05 Aligned_cols=48 Identities=29% Similarity=0.397 Sum_probs=38.2
Q ss_pred HHHHHh-cCCceeeCcceeEEEEcCC-ceEEEEcCCcEEEeCEEEEecCh
Q 024393 8 VINTLA-KGLDIRLGHRVTKITRHYI-GVKVTVEGGKTFVADAVVVAVPL 55 (268)
Q Consensus 8 l~~~l~-~~l~i~~~~~V~~I~~~~~-~v~v~~~~g~~~~ad~VI~a~p~ 55 (268)
+.+.|. ++++|+++++|++|+.+++ .+.|.+.+|+++.+|.||+++..
T Consensus 241 l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~ 290 (495)
T 2wpf_A 241 VTKQLTANGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGR 290 (495)
T ss_dssp HHHHHHHTTCEEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCE
T ss_pred HHHHHHhCCCEEEeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCC
Confidence 334443 3689999999999998764 47788888889999999999864
No 83
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=92.48 E-value=0.3 Score=42.62 Aligned_cols=47 Identities=9% Similarity=0.229 Sum_probs=36.9
Q ss_pred HHHHh-cCCceeeCcceeEEEEcCCc--eEEEEcCC-cEEEeCEEEEecCh
Q 024393 9 INTLA-KGLDIRLGHRVTKITRHYIG--VKVTVEGG-KTFVADAVVVAVPL 55 (268)
Q Consensus 9 ~~~l~-~~l~i~~~~~V~~I~~~~~~--v~v~~~~g-~~~~ad~VI~a~p~ 55 (268)
.+.|. .+++|+++++|++|+.++++ +.|.+.+| +++.+|.||+++..
T Consensus 233 ~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~ 283 (479)
T 2hqm_A 233 TDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGR 283 (479)
T ss_dssp HHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCE
T ss_pred HHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCC
Confidence 34443 36899999999999976554 67888888 78999999999864
No 84
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=92.41 E-value=0.27 Score=43.16 Aligned_cols=42 Identities=24% Similarity=0.292 Sum_probs=35.7
Q ss_pred CCceeeCcceeEEEEcCC-ceEEEEcCCcEEEeCEEEEecChh
Q 024393 15 GLDIRLGHRVTKITRHYI-GVKVTVEGGKTFVADAVVVAVPLG 56 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~-~v~v~~~~g~~~~ad~VI~a~p~~ 56 (268)
+++|+++++|.+|+.+++ .+.|.+.+|+++.+|.||+++...
T Consensus 245 GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~ 287 (490)
T 1fec_A 245 GINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRV 287 (490)
T ss_dssp TEEEEETCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEE
T ss_pred CCEEEeCCEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCCC
Confidence 578999999999998765 477888888889999999998653
No 85
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=92.35 E-value=0.25 Score=41.74 Aligned_cols=41 Identities=27% Similarity=0.193 Sum_probs=34.8
Q ss_pred CCceeeCcceeEEEEcCCc-eEEEEcCCcEEEeCEEEEecChh
Q 024393 15 GLDIRLGHRVTKITRHYIG-VKVTVEGGKTFVADAVVVAVPLG 56 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~-v~v~~~~g~~~~ad~VI~a~p~~ 56 (268)
+++|+++++|++|..++++ +.|.+.+| ++.||.||+|+-..
T Consensus 188 g~~i~~~~~v~~i~~~~~~~~~v~~~~g-~~~a~~vV~a~G~~ 229 (405)
T 2gag_B 188 GVDIIQNCEVTGFIKDGEKVTGVKTTRG-TIHAGKVALAGAGH 229 (405)
T ss_dssp TCEEECSCCEEEEEESSSBEEEEEETTC-CEEEEEEEECCGGG
T ss_pred CCEEEcCCeEEEEEEeCCEEEEEEeCCc-eEECCEEEECCchh
Confidence 5789999999999988776 45777777 79999999999764
No 86
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=92.29 E-value=0.36 Score=41.74 Aligned_cols=42 Identities=17% Similarity=0.322 Sum_probs=34.0
Q ss_pred CCceeeCcceeEEEEcCCceEEEEcCCcEEEeCEEEEecChh
Q 024393 15 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 56 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~ 56 (268)
+++|+++++|++|+.+++++.....+|+++.+|.||+++...
T Consensus 205 Gv~i~~~~~v~~i~~~~~~v~~v~~~g~~i~~D~vv~a~G~~ 246 (452)
T 2cdu_A 205 GVNLVLGSKVAAFEEVDDEIITKTLDGKEIKSDIAILCIGFR 246 (452)
T ss_dssp TCEEEESSCEEEEEEETTEEEEEETTSCEEEESEEEECCCEE
T ss_pred CCEEEcCCeeEEEEcCCCeEEEEEeCCCEEECCEEEECcCCC
Confidence 679999999999997666665334478889999999998654
No 87
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=92.09 E-value=0.25 Score=43.93 Aligned_cols=40 Identities=18% Similarity=0.091 Sum_probs=34.5
Q ss_pred CceeeCcceeEEEEcCC--ceEEEEcCCcEEEeCEEEEecCh
Q 024393 16 LDIRLGHRVTKITRHYI--GVKVTVEGGKTFVADAVVVAVPL 55 (268)
Q Consensus 16 l~i~~~~~V~~I~~~~~--~v~v~~~~g~~~~ad~VI~a~p~ 55 (268)
.+|+++++|.+++.+++ .|.|++.+|++++||.||+|+-.
T Consensus 111 ~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~ 152 (542)
T 1w4x_A 111 SGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQ 152 (542)
T ss_dssp GGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCS
T ss_pred ceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCC
Confidence 36999999999998653 58899988989999999999975
No 88
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=92.08 E-value=0.3 Score=42.96 Aligned_cols=43 Identities=28% Similarity=0.235 Sum_probs=36.9
Q ss_pred CCceeeCcceeEEEEcCCceEEEEcCCc---EEEeCEEEEecChhh
Q 024393 15 GLDIRLGHRVTKITRHYIGVKVTVEGGK---TFVADAVVVAVPLGV 57 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~v~~~~g~---~~~ad~VI~a~p~~~ 57 (268)
+++|+++++|++|+.++++|.|++.+++ +++||+||.|.-.+.
T Consensus 121 gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S 166 (499)
T 2qa2_A 121 GAELLRGHTVRALTDEGDHVVVEVEGPDGPRSLTTRYVVGCDGGRS 166 (499)
T ss_dssp TCEEEESCEEEEEEECSSCEEEEEECSSCEEEEEEEEEEECCCTTC
T ss_pred CCEEEcCCEEEEEEEeCCEEEEEEEcCCCcEEEEeCEEEEccCccc
Confidence 5789999999999999888888887764 789999999887654
No 89
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=91.99 E-value=0.4 Score=41.26 Aligned_cols=41 Identities=34% Similarity=0.481 Sum_probs=35.2
Q ss_pred CCceeeCcceeEEEE--cCCce-EEEEcCCcEEEeCEEEEecCh
Q 024393 15 GLDIRLGHRVTKITR--HYIGV-KVTVEGGKTFVADAVVVAVPL 55 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~--~~~~v-~v~~~~g~~~~ad~VI~a~p~ 55 (268)
+++|+++++|++|+. +++++ .|.+.+|+++.+|.||+++..
T Consensus 205 GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~ 248 (431)
T 1q1r_A 205 GVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGL 248 (431)
T ss_dssp TCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCE
T ss_pred CeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCC
Confidence 678999999999997 55665 578888989999999999875
No 90
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=91.81 E-value=0.3 Score=38.08 Aligned_cols=41 Identities=22% Similarity=0.037 Sum_probs=33.6
Q ss_pred CCceeeCcceeEEEEcCCce-EEEEcCCcEEEeCEEEEecChh
Q 024393 15 GLDIRLGHRVTKITRHYIGV-KVTVEGGKTFVADAVVVAVPLG 56 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v-~v~~~~g~~~~ad~VI~a~p~~ 56 (268)
+++++ +++|++|..+++++ .|.+.+|+++.||.||+|+-..
T Consensus 83 gv~i~-~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~ 124 (232)
T 2cul_A 83 PLHLF-QATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSF 124 (232)
T ss_dssp TEEEE-ECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTC
T ss_pred CcEEE-EeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCC
Confidence 45677 67999999888775 5778888889999999998764
No 91
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=91.80 E-value=0.19 Score=41.45 Aligned_cols=41 Identities=22% Similarity=0.267 Sum_probs=36.4
Q ss_pred CCceeeCcceeEEEEcCCceE-EEEcCCcEEEeCEEEEecChh
Q 024393 15 GLDIRLGHRVTKITRHYIGVK-VTVEGGKTFVADAVVVAVPLG 56 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~-v~~~~g~~~~ad~VI~a~p~~ 56 (268)
+++++++++|++|+.+++++. |.+.+| ++.+|+||+|+-..
T Consensus 90 ~~~~~~~~~v~~i~~~~~~~~~v~~~~g-~~~~d~vV~AtG~~ 131 (357)
T 4a9w_A 90 ALPVLRPIRVQRVSHFGERLRVVARDGR-QWLARAVISATGTW 131 (357)
T ss_dssp TCCEECSCCEEEEEEETTEEEEEETTSC-EEEEEEEEECCCSG
T ss_pred CCEEEcCCEEEEEEECCCcEEEEEeCCC-EEEeCEEEECCCCC
Confidence 568999999999999988888 888777 89999999999854
No 92
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=91.76 E-value=0.35 Score=41.86 Aligned_cols=42 Identities=21% Similarity=0.261 Sum_probs=35.0
Q ss_pred CCceeeCcceeEEEEcCCceEEEEc---CCc--EEEeCEEEEecChh
Q 024393 15 GLDIRLGHRVTKITRHYIGVKVTVE---GGK--TFVADAVVVAVPLG 56 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~v~~~---~g~--~~~ad~VI~a~p~~ 56 (268)
+++|++++.|++|+.+++++.+++. +|+ ++.+|.||+|+-..
T Consensus 330 ~v~i~~~~~v~~v~~~~~~~~v~~~~~~~g~~~~~~~D~Vv~AtG~~ 376 (463)
T 3s5w_A 330 RHAFRCMTTVERATATAQGIELALRDAGSGELSVETYDAVILATGYE 376 (463)
T ss_dssp CSEEETTEEEEEEEEETTEEEEEEEETTTCCEEEEEESEEEECCCEE
T ss_pred CeEEEeCCEEEEEEecCCEEEEEEEEcCCCCeEEEECCEEEEeeCCC
Confidence 6789999999999998888777765 665 48899999998753
No 93
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=91.74 E-value=0.4 Score=41.69 Aligned_cols=50 Identities=22% Similarity=0.293 Sum_probs=37.2
Q ss_pred HHHHHH-h-cCCceeeCcceeEEEEcCCceEEEEc--CC--cEEEeCEEEEecChh
Q 024393 7 PVINTL-A-KGLDIRLGHRVTKITRHYIGVKVTVE--GG--KTFVADAVVVAVPLG 56 (268)
Q Consensus 7 ~l~~~l-~-~~l~i~~~~~V~~I~~~~~~v~v~~~--~g--~~~~ad~VI~a~p~~ 56 (268)
.+.+.| . .+++|+++++|.+|+.+++++.+.+. +| +++.+|.||+++...
T Consensus 220 ~l~~~l~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~~ 275 (468)
T 2qae_A 220 ALVGALAKNEKMKFMTSTKVVGGTNNGDSVSLEVEGKNGKRETVTCEALLVSVGRR 275 (468)
T ss_dssp HHHHHHHHHTCCEEECSCEEEEEEECSSSEEEEEECC---EEEEEESEEEECSCEE
T ss_pred HHHHHHhhcCCcEEEeCCEEEEEEEcCCeEEEEEEcCCCceEEEECCEEEECCCcc
Confidence 344555 3 46899999999999987777777665 56 678999999998653
No 94
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=91.47 E-value=0.34 Score=41.81 Aligned_cols=41 Identities=27% Similarity=0.177 Sum_probs=34.6
Q ss_pred CceeeCcceeEEEEcCCceEEEEcC---Cc---EEEeCEEEEecChh
Q 024393 16 LDIRLGHRVTKITRHYIGVKVTVEG---GK---TFVADAVVVAVPLG 56 (268)
Q Consensus 16 l~i~~~~~V~~I~~~~~~v~v~~~~---g~---~~~ad~VI~a~p~~ 56 (268)
..|+++++|++|+..+++|.|++.+ |+ ++.||+||+|+-..
T Consensus 130 ~~i~~~t~V~~v~~~~~~~~V~~~~~~~G~~~~~~~~d~VVvAtG~~ 176 (447)
T 2gv8_A 130 PFIKLATDVLDIEKKDGSWVVTYKGTKAGSPISKDIFDAVSICNGHY 176 (447)
T ss_dssp GGEECSEEEEEEEEETTEEEEEEEESSTTCCEEEEEESEEEECCCSS
T ss_pred CeEEeCCEEEEEEeCCCeEEEEEeecCCCCeeEEEEeCEEEECCCCC
Confidence 3599999999999888888887765 66 78999999999764
No 95
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=91.36 E-value=0.33 Score=43.28 Aligned_cols=39 Identities=31% Similarity=0.279 Sum_probs=34.8
Q ss_pred ceeeCcceeEEEEcCC--ceEEEEcCCcEEEeCEEEEecCh
Q 024393 17 DIRLGHRVTKITRHYI--GVKVTVEGGKTFVADAVVVAVPL 55 (268)
Q Consensus 17 ~i~~~~~V~~I~~~~~--~v~v~~~~g~~~~ad~VI~a~p~ 55 (268)
.|+++++|++++.+++ .|.|++.+|+++.||+||+|+-.
T Consensus 117 ~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~ 157 (549)
T 4ap3_A 117 DIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGP 157 (549)
T ss_dssp GEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCS
T ss_pred cEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCC
Confidence 6999999999998765 68899999999999999999974
No 96
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=91.35 E-value=0.51 Score=39.21 Aligned_cols=60 Identities=17% Similarity=0.190 Sum_probs=34.0
Q ss_pred hcCCCCCeeeeecccCCC-CCccchhhHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCc
Q 024393 199 LRIPVDNLFFAGEATSMS-YPGSVHGAFSTGLMAAEDCRMRVLERYGELDLFQPVMGEETP 258 (268)
Q Consensus 199 ~~~p~~~l~~aG~~~~~~-~~g~~~gA~~Sg~~aa~~i~~~l~~~~~~~~~~~~~~~~~~~ 258 (268)
+++..++||.+||..... .......|+..|..||..|...+.........+...+|.+.+
T Consensus 286 ~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~~~~~~~~~~~~~~~~~ 346 (360)
T 3ab1_A 286 MKTSVDGLYAAGDIAYYPGKLKIIQTGLSEATMAVRHSLSYIKPGEKIRNVFSSVKMAKEK 346 (360)
T ss_dssp SBCSSTTEEECSTTEECTTCCCSHHHHHHHHHHHHHHHHHHHSCC----------------
T ss_pred CcCCCCCEEEecCccCCCCccceeehhHHHHHHHHHHHHhhcCCccccCceeccchhhhhh
Confidence 345678999999987531 234677899999999999998776655544445666665544
No 97
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=91.33 E-value=0.5 Score=41.49 Aligned_cols=48 Identities=17% Similarity=0.178 Sum_probs=37.6
Q ss_pred HHHHh-cCCceeeCcceeEEEEcCC-ceEEEEcCCcE-EEeCEEEEecChh
Q 024393 9 INTLA-KGLDIRLGHRVTKITRHYI-GVKVTVEGGKT-FVADAVVVAVPLG 56 (268)
Q Consensus 9 ~~~l~-~~l~i~~~~~V~~I~~~~~-~v~v~~~~g~~-~~ad~VI~a~p~~ 56 (268)
.+.|. .+++|+++++|++|+.+++ .+.+.+.+|++ +.+|.||+++...
T Consensus 224 ~~~l~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~~ 274 (500)
T 1onf_A 224 ENDMKKNNINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGRS 274 (500)
T ss_dssp HHHHHHTTCEEECSCCEEEEEESSTTCEEEEETTSCEEEEESEEEECCCBC
T ss_pred HHHHHhCCCEEEECCEEEEEEEcCCceEEEEECCCcEEEECCEEEECCCCC
Confidence 34443 3678999999999997654 47788888887 9999999998753
No 98
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=91.27 E-value=0.44 Score=41.42 Aligned_cols=41 Identities=29% Similarity=0.463 Sum_probs=34.6
Q ss_pred CCceeeCcceeEEEEcCCceEEEEc-C--Cc--EEEeCEEEEecCh
Q 024393 15 GLDIRLGHRVTKITRHYIGVKVTVE-G--GK--TFVADAVVVAVPL 55 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~v~~~-~--g~--~~~ad~VI~a~p~ 55 (268)
+++|+++++|++|+.+++++.+.+. + |+ ++.+|.||+++..
T Consensus 224 gV~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~ 269 (464)
T 2eq6_A 224 GIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGR 269 (464)
T ss_dssp TCEEECSEEEEEEEEETTEEEEEEEETTCCSCEEEEESEEEECSCE
T ss_pred CCEEEcCCEEEEEEEeCCEEEEEEeecCCCceeEEEcCEEEECCCc
Confidence 6789999999999988777777765 6 76 8999999999864
No 99
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=91.26 E-value=0.41 Score=41.54 Aligned_cols=47 Identities=21% Similarity=0.323 Sum_probs=37.2
Q ss_pred HHHHHhc-CCceeeCcceeEEEEcCCc-eEEE-EcCCcEEEeCEEEEecCh
Q 024393 8 VINTLAK-GLDIRLGHRVTKITRHYIG-VKVT-VEGGKTFVADAVVVAVPL 55 (268)
Q Consensus 8 l~~~l~~-~l~i~~~~~V~~I~~~~~~-v~v~-~~~g~~~~ad~VI~a~p~ 55 (268)
+.+.|.+ +++|+++++|.+|+.++++ +.|. +.+|+ +.+|.||+++..
T Consensus 217 l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g~-i~aD~Vv~a~G~ 266 (463)
T 4dna_A 217 LHAAMEEKGIRILCEDIIQSVSADADGRRVATTMKHGE-IVADQVMLALGR 266 (463)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEECTTSCEEEEESSSCE-EEESEEEECSCE
T ss_pred HHHHHHHCCCEEECCCEEEEEEEcCCCEEEEEEcCCCe-EEeCEEEEeeCc
Confidence 3344433 5799999999999987665 6788 78887 999999999865
No 100
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=91.19 E-value=0.33 Score=41.80 Aligned_cols=41 Identities=24% Similarity=0.365 Sum_probs=34.1
Q ss_pred CCceeeCcceeEEEE---------------cCCce-EEEEcCCcEE--EeCEEEEecChh
Q 024393 15 GLDIRLGHRVTKITR---------------HYIGV-KVTVEGGKTF--VADAVVVAVPLG 56 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~---------------~~~~v-~v~~~~g~~~--~ad~VI~a~p~~ 56 (268)
+++|+++++|++|.. +++++ .|.+.+| ++ .||.||+|+-..
T Consensus 195 Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~ 253 (448)
T 3axb_A 195 GVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVW 253 (448)
T ss_dssp TCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGG
T ss_pred CCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcC
Confidence 578999999999998 56664 5778777 68 999999999765
No 101
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=91.06 E-value=0.57 Score=41.70 Aligned_cols=42 Identities=21% Similarity=0.480 Sum_probs=35.5
Q ss_pred cCCceeeCcceeEEEE-------------------cCCceEEEEcCCcEEEeCEEEEecCh
Q 024393 14 KGLDIRLGHRVTKITR-------------------HYIGVKVTVEGGKTFVADAVVVAVPL 55 (268)
Q Consensus 14 ~~l~i~~~~~V~~I~~-------------------~~~~v~v~~~~g~~~~ad~VI~a~p~ 55 (268)
++++|++++.|.+|+. .++++.+...+|+++.+|.||+++..
T Consensus 205 ~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~ 265 (565)
T 3ntd_A 205 QGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIMAIGV 265 (565)
T ss_dssp TTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTSCEEEESEEEECSCE
T ss_pred CCCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCCCEEEcCEEEECcCC
Confidence 3678999999999997 45667788888889999999999853
No 102
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=90.79 E-value=0.42 Score=42.56 Aligned_cols=39 Identities=31% Similarity=0.277 Sum_probs=35.0
Q ss_pred ceeeCcceeEEEEcCC--ceEEEEcCCcEEEeCEEEEecCh
Q 024393 17 DIRLGHRVTKITRHYI--GVKVTVEGGKTFVADAVVVAVPL 55 (268)
Q Consensus 17 ~i~~~~~V~~I~~~~~--~v~v~~~~g~~~~ad~VI~a~p~ 55 (268)
.|+++++|++++.+++ +|.|++.+|+++.||.||+|+-.
T Consensus 105 ~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~ 145 (540)
T 3gwf_A 105 HFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGL 145 (540)
T ss_dssp GEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCS
T ss_pred eeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcc
Confidence 6999999999998765 68899999989999999999975
No 103
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=90.77 E-value=0.51 Score=41.08 Aligned_cols=42 Identities=36% Similarity=0.358 Sum_probs=34.9
Q ss_pred CCceeeCcceeEEEEcCCceEEEEcCC---cEEEeCEEEEecChh
Q 024393 15 GLDIRLGHRVTKITRHYIGVKVTVEGG---KTFVADAVVVAVPLG 56 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~v~~~~g---~~~~ad~VI~a~p~~ 56 (268)
+++|+++++|.+|+.+++++.+...++ +++.+|.||+++...
T Consensus 235 Gv~v~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~D~vi~a~G~~ 279 (476)
T 3lad_A 235 GLKILLGARVTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGRR 279 (476)
T ss_dssp TEEEEETCEEEEEEECSSCEEEEEESSSEEEEEEESEEEECSCEE
T ss_pred CCEEEECCEEEEEEEcCCEEEEEEEeCCCcEEEECCEEEEeeCCc
Confidence 578999999999998888877776654 678999999998753
No 104
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=90.58 E-value=0.57 Score=41.09 Aligned_cols=53 Identities=19% Similarity=0.106 Sum_probs=39.7
Q ss_pred ChHHHHHHHh-cCCceeeCcceeEEEEcCCceEEEEcCCcEEEeCEEEEecChh
Q 024393 4 GYLPVINTLA-KGLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 56 (268)
Q Consensus 4 G~~~l~~~l~-~~l~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~ 56 (268)
|...+-+.+. .+++|++++.|.+|+.+++...+.+.+|+++.+|.||+++...
T Consensus 259 G~~gle~~l~~~GV~v~~~~~v~~i~~~~~v~~v~~~~g~~i~aD~Vv~a~G~~ 312 (493)
T 1y56_A 259 KADEVIQELERWGIDYVHIPNVKRVEGNEKVERVIDMNNHEYKVDALIFADGRR 312 (493)
T ss_dssp THHHHHHHHHHHTCEEEECSSEEEEECSSSCCEEEETTCCEEECSEEEECCCEE
T ss_pred CHHHHHHHHHhCCcEEEeCCeeEEEecCCceEEEEeCCCeEEEeCEEEECCCcC
Confidence 4444444443 4789999999999986654445777888899999999998753
No 105
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=90.35 E-value=0.48 Score=44.47 Aligned_cols=42 Identities=29% Similarity=0.207 Sum_probs=35.5
Q ss_pred CCceeeCcceeEEEEcCCce-EEEEcCCcEEEeCEEEEecChhh
Q 024393 15 GLDIRLGHRVTKITRHYIGV-KVTVEGGKTFVADAVVVAVPLGV 57 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v-~v~~~~g~~~~ad~VI~a~p~~~ 57 (268)
+++|+++++|++|+.+++++ .|.+.+| ++.||.||+|+-...
T Consensus 165 Gv~i~~~t~V~~i~~~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 165 GVTYRGSTTVTGIEQSGGRVTGVQTADG-VIPADIVVSCAGFWG 207 (830)
T ss_dssp TCEEECSCCEEEEEEETTEEEEEEETTE-EEECSEEEECCGGGH
T ss_pred CCEEECCceEEEEEEeCCEEEEEEECCc-EEECCEEEECCccch
Confidence 57899999999999988875 4777777 899999999997754
No 106
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=90.34 E-value=0.49 Score=41.66 Aligned_cols=51 Identities=22% Similarity=0.222 Sum_probs=35.7
Q ss_pred HHHHHHHhc-----CCceeeCcceeEEEEc-CCceE-EEEc-CCc--EEEeC-EEEEecChh
Q 024393 6 LPVINTLAK-----GLDIRLGHRVTKITRH-YIGVK-VTVE-GGK--TFVAD-AVVVAVPLG 56 (268)
Q Consensus 6 ~~l~~~l~~-----~l~i~~~~~V~~I~~~-~~~v~-v~~~-~g~--~~~ad-~VI~a~p~~ 56 (268)
..+.+.|.+ +++|+++++|++|..+ ++++. |... +++ ++.|| .||+|+-..
T Consensus 202 ~~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~ 263 (510)
T 4at0_A 202 YMLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSF 263 (510)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCC
T ss_pred HHHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCCh
Confidence 355655544 5789999999999988 56544 4443 342 58896 999998653
No 107
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=90.23 E-value=0.66 Score=40.21 Aligned_cols=42 Identities=29% Similarity=0.376 Sum_probs=34.4
Q ss_pred CCceeeCcceeEEEEcCCceEEEEc-CC--cEEEeCEEEEecChh
Q 024393 15 GLDIRLGHRVTKITRHYIGVKVTVE-GG--KTFVADAVVVAVPLG 56 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~v~~~-~g--~~~~ad~VI~a~p~~ 56 (268)
+++|+++++|++|+.+++++.+.+. +| +++.+|.||+++...
T Consensus 226 gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~ 270 (464)
T 2a8x_A 226 GVTILTATKVESIADGGSQVTVTVTKDGVAQELKAEKVLQAIGFA 270 (464)
T ss_dssp TCEEECSCEEEEEEECSSCEEEEEESSSCEEEEEESEEEECSCEE
T ss_pred CCEEEeCcEEEEEEEcCCeEEEEEEcCCceEEEEcCEEEECCCCC
Confidence 6899999999999987777777664 56 678999999998643
No 108
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=90.15 E-value=0.38 Score=42.02 Aligned_cols=42 Identities=29% Similarity=0.225 Sum_probs=34.7
Q ss_pred CCceeeCcceeEEEEcCCceEEEEcC----CcEEEeCEEEEecChh
Q 024393 15 GLDIRLGHRVTKITRHYIGVKVTVEG----GKTFVADAVVVAVPLG 56 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~v~~~~----g~~~~ad~VI~a~p~~ 56 (268)
+++|+++++|.+|+.+++++.+.+.+ |+++.+|.||+++...
T Consensus 240 gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~~ 285 (482)
T 1ojt_A 240 FDNIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGRA 285 (482)
T ss_dssp EEEEECSCEEEEEEEETTEEEEEEESSSCCSSCEEESCEEECCCEE
T ss_pred CCEEEECCEEEEEEEcCCeEEEEEeccCCCceEEEcCEEEECcCCC
Confidence 56899999999999877777777665 7788999999998643
No 109
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=90.11 E-value=0.77 Score=37.16 Aligned_cols=41 Identities=22% Similarity=0.247 Sum_probs=34.2
Q ss_pred CCceeeCcceeEEEEcCCceEEEEcCCcEEEeCEEEEecChh
Q 024393 15 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 56 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~ 56 (268)
++++++ +.|.+|..+++.+.+.+.+|+++.+|+||+|+-..
T Consensus 84 ~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~d~lvlAtG~~ 124 (323)
T 3f8d_A 84 EVPVLL-DIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVK 124 (323)
T ss_dssp TCCEEE-SCEEEEEEC--CEEEEESSSCEEEEEEEEECCCCE
T ss_pred CCEEEE-EEEEEEEecCCEEEEEECCCCEEEcCEEEECcCCC
Confidence 468888 99999999888899999888899999999998654
No 110
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=89.75 E-value=0.22 Score=40.97 Aligned_cols=41 Identities=24% Similarity=0.273 Sum_probs=30.5
Q ss_pred cCCCCCeeeeecccCC-----CCCccchhhHHHHHHHHHHHHHHHH
Q 024393 200 RIPVDNLFFAGEATSM-----SYPGSVHGAFSTGLMAAEDCRMRVL 240 (268)
Q Consensus 200 ~~p~~~l~~aG~~~~~-----~~~g~~~gA~~Sg~~aa~~i~~~l~ 240 (268)
.+..++||.|||.... +-+..+-+++.||++||+.|++.|.
T Consensus 280 ~t~vpGv~aaGDaa~~v~g~~rmGp~~g~mi~SG~~AAe~I~~~la 325 (326)
T 3fpz_A 280 YAGVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp CTTSBTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred EECCCCEEEEchHhccccCCCcCchHHHHHHHHHHHHHHHHHHHhc
Confidence 4557899999997531 1112556778999999999998875
No 111
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=89.74 E-value=0.79 Score=40.77 Aligned_cols=40 Identities=20% Similarity=0.194 Sum_probs=36.6
Q ss_pred CCceeeCcceeEEEEcCCceEEEEcCCcEEEeCEEEEecC
Q 024393 15 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVP 54 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p 54 (268)
++++++++.|.+++..++++.|.+.+++++.+|.|++|+-
T Consensus 277 gi~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~D~vLvAvG 316 (542)
T 4b1b_A 277 GVMFKNGILPKKLTKMDDKILVEFSDKTSELYDTVLYAIG 316 (542)
T ss_dssp TCEEEETCCEEEEEEETTEEEEEETTSCEEEESEEEECSC
T ss_pred cceeecceEEEEEEecCCeEEEEEcCCCeEEEEEEEEccc
Confidence 5689999999999999999999998888999999999984
No 112
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=89.73 E-value=0.39 Score=39.93 Aligned_cols=41 Identities=24% Similarity=0.136 Sum_probs=35.4
Q ss_pred CCceeeCcceeEEEEcCCceEEEEcCCcEEEeCEEEEecChh
Q 024393 15 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 56 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~ 56 (268)
+++|+++++|.+|+.+++++.|.+.+| ++.+|+||+|+-..
T Consensus 102 gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~~d~vVlAtG~~ 142 (369)
T 3d1c_A 102 ELNIFENTVVTNISADDAYYTIATTTE-TYHADYIFVATGDY 142 (369)
T ss_dssp TCEEECSCCEEEEEECSSSEEEEESSC-CEEEEEEEECCCST
T ss_pred CCeEEeCCEEEEEEECCCeEEEEeCCC-EEEeCEEEECCCCC
Confidence 568999999999999887888888777 68999999999764
No 113
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=89.56 E-value=0.31 Score=41.26 Aligned_cols=40 Identities=18% Similarity=0.247 Sum_probs=35.7
Q ss_pred CceeeCcceeEEEEcCCceEEEEcCCcEEEeCEEEEecCh
Q 024393 16 LDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 55 (268)
Q Consensus 16 l~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~ 55 (268)
+++++++.|..++.+++...+.+.+|+++.+|.|+++.|.
T Consensus 217 i~v~~~~~v~~v~~~~~~~~v~~~~g~~i~~D~vi~~~g~ 256 (401)
T 3vrd_B 217 IEWHPGPDAAVVKTDTEAMTVETSFGETFKAAVINLIPPQ 256 (401)
T ss_dssp EEEECTTTTCEEEEETTTTEEEETTSCEEECSEEEECCCE
T ss_pred cEEEeCceEEEEEecccceEEEcCCCcEEEeeEEEEecCc
Confidence 4699999999999988888899999999999999998764
No 114
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=89.54 E-value=0.92 Score=40.36 Aligned_cols=42 Identities=26% Similarity=0.283 Sum_probs=35.2
Q ss_pred CCceeeCcceeEEEEcCCc--eEEEEcCCcEEEeCEEEEecChhh
Q 024393 15 GLDIRLGHRVTKITRHYIG--VKVTVEGGKTFVADAVVVAVPLGV 57 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~--v~v~~~~g~~~~ad~VI~a~p~~~ 57 (268)
+++|+++ +|++|..++++ +.|.+.+|+++.||.||.|.-...
T Consensus 209 Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S 252 (550)
T 2e4g_A 209 GVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRG 252 (550)
T ss_dssp CCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGC
T ss_pred CcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCch
Confidence 6789999 99999986554 568888888899999999997754
No 115
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=89.54 E-value=0.73 Score=41.15 Aligned_cols=42 Identities=31% Similarity=0.287 Sum_probs=32.8
Q ss_pred CCceeeCcceeEEEEcC-CceE-EEE--cCCc--EEEeCEEEEecChh
Q 024393 15 GLDIRLGHRVTKITRHY-IGVK-VTV--EGGK--TFVADAVVVAVPLG 56 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~-~~v~-v~~--~~g~--~~~ad~VI~a~p~~ 56 (268)
+++|+++++|++|..++ +++. |.. .+|+ ++.||.||+|+-..
T Consensus 264 gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~ 311 (566)
T 1qo8_A 264 GIDTRLNSRVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGY 311 (566)
T ss_dssp TCCEECSEEEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCC
T ss_pred CCEEEeCCEEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCc
Confidence 57899999999999887 6643 443 3675 68899999998654
No 116
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=89.53 E-value=0.66 Score=39.05 Aligned_cols=43 Identities=12% Similarity=0.015 Sum_probs=35.3
Q ss_pred CCceeeCcceeEEEEcC-CceEEEE-cCCc--EEEeCEEEEecChhh
Q 024393 15 GLDIRLGHRVTKITRHY-IGVKVTV-EGGK--TFVADAVVVAVPLGV 57 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~-~~v~v~~-~~g~--~~~ad~VI~a~p~~~ 57 (268)
+++|+++++|++|+.++ +++.|++ .+|+ ++.||.||.|.-.+.
T Consensus 117 g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~~~a~~vV~AdG~~S 163 (394)
T 1k0i_A 117 GATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIAGCDGFHG 163 (394)
T ss_dssp TCEEESSCEEEEEECTTSSSCEEEEEETTEEEEEECSEEEECCCTTC
T ss_pred CCeEEeceeEEEEEEecCCceEEEEecCCcEEEEEeCEEEECCCCCc
Confidence 57899999999999864 4577776 6886 789999999987654
No 117
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=89.52 E-value=0.74 Score=41.17 Aligned_cols=41 Identities=27% Similarity=0.242 Sum_probs=31.9
Q ss_pred CCceeeCcceeEEEEcC-CceE-EEE--cCCc--EEEeCEEEEecCh
Q 024393 15 GLDIRLGHRVTKITRHY-IGVK-VTV--EGGK--TFVADAVVVAVPL 55 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~-~~v~-v~~--~~g~--~~~ad~VI~a~p~ 55 (268)
+++|+++++|++|..++ +++. |.. .+|+ ++.||.||+|+-.
T Consensus 269 gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg 315 (571)
T 1y0p_A 269 NIDLRMNTRGIEVLKDDKGTVKGILVKGMYKGYYWVKADAVILATGG 315 (571)
T ss_dssp TCEEESSEEEEEEEECTTSCEEEEEEEETTTEEEEEECSEEEECCCC
T ss_pred CCEEEeCCEeeEeEEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCC
Confidence 57899999999999876 6543 443 3675 6889999999865
No 118
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=89.48 E-value=0.6 Score=40.38 Aligned_cols=42 Identities=31% Similarity=0.272 Sum_probs=34.0
Q ss_pred CCceeeCcceeEEEEcCCceEEEEc---CCcEEEeCEEEEecChh
Q 024393 15 GLDIRLGHRVTKITRHYIGVKVTVE---GGKTFVADAVVVAVPLG 56 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~v~~~---~g~~~~ad~VI~a~p~~ 56 (268)
+++|+++++|.+|+.+++++.+.+. +++++.+|.||+++...
T Consensus 225 gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~ 269 (455)
T 1ebd_A 225 GVEVVTNALAKGAEEREDGVTVTYEANGETKTIDADYVLVTVGRR 269 (455)
T ss_dssp TCEEEESEEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCEE
T ss_pred CCEEEeCCEEEEEEEeCCeEEEEEEeCCceeEEEcCEEEECcCCC
Confidence 6789999999999987777766654 34678999999998754
No 119
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=89.32 E-value=0.56 Score=41.77 Aligned_cols=39 Identities=18% Similarity=0.106 Sum_probs=34.3
Q ss_pred ceeeCcceeEEEEcCC--ceEEEEcCCcEEEeCEEEEecCh
Q 024393 17 DIRLGHRVTKITRHYI--GVKVTVEGGKTFVADAVVVAVPL 55 (268)
Q Consensus 17 ~i~~~~~V~~I~~~~~--~v~v~~~~g~~~~ad~VI~a~p~ 55 (268)
.|+++++|.+++.+++ .|.|++.+|++++||+||+|+-.
T Consensus 105 ~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~ 145 (545)
T 3uox_A 105 HYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGP 145 (545)
T ss_dssp GEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCS
T ss_pred cEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCC
Confidence 6999999999997654 58899999999999999999974
No 120
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=89.30 E-value=0.83 Score=39.61 Aligned_cols=41 Identities=15% Similarity=0.158 Sum_probs=33.9
Q ss_pred CCceeeCcceeEEEEcCCceEEEEcCCcEEEeCEEEEecChh
Q 024393 15 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 56 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~ 56 (268)
+++|+++++|.+|+.+++.+.+.+. ++++.+|.||+++...
T Consensus 230 Gv~i~~~~~v~~i~~~~~~~~v~~~-~~~i~aD~Vv~a~G~~ 270 (467)
T 1zk7_A 230 GIEVLEHTQASQVAHMDGEFVLTTT-HGELRADKLLVATGRT 270 (467)
T ss_dssp TCEEETTCCEEEEEEETTEEEEEET-TEEEEESEEEECSCEE
T ss_pred CCEEEcCCEEEEEEEeCCEEEEEEC-CcEEEcCEEEECCCCC
Confidence 6789999999999987766667665 5589999999998653
No 121
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=89.25 E-value=0.56 Score=38.31 Aligned_cols=50 Identities=4% Similarity=0.008 Sum_probs=37.3
Q ss_pred HHHHHHHh-c-CCceeeCcceeEEEEcCCceE-EEEcC-----CcEEEeCEEEEecCh
Q 024393 6 LPVINTLA-K-GLDIRLGHRVTKITRHYIGVK-VTVEG-----GKTFVADAVVVAVPL 55 (268)
Q Consensus 6 ~~l~~~l~-~-~l~i~~~~~V~~I~~~~~~v~-v~~~~-----g~~~~ad~VI~a~p~ 55 (268)
..+.+.+. + +++|+++++|.+|+.+++++. |.+.+ ++++.+|.||+++..
T Consensus 212 ~~~~~~l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~ 269 (338)
T 3itj_A 212 TIMQKRAEKNEKIEILYNTVALEAKGDGKLLNALRIKNTKKNEETDLPVSGLFYAIGH 269 (338)
T ss_dssp HHHHHHHHHCTTEEEECSEEEEEEEESSSSEEEEEEEETTTTEEEEEECSEEEECSCE
T ss_pred HHHHHHHHhcCCeEEeecceeEEEEcccCcEEEEEEEECCCCceEEEEeCEEEEEeCC
Confidence 34556664 3 689999999999998877543 55544 357899999998875
No 122
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=89.21 E-value=0.57 Score=39.83 Aligned_cols=50 Identities=22% Similarity=0.261 Sum_probs=38.1
Q ss_pred HHHHHHhc--C-CceeeCcceeEEEEcCCceEEEEcC---C--cEEEeCEEEEecChhh
Q 024393 7 PVINTLAK--G-LDIRLGHRVTKITRHYIGVKVTVEG---G--KTFVADAVVVAVPLGV 57 (268)
Q Consensus 7 ~l~~~l~~--~-l~i~~~~~V~~I~~~~~~v~v~~~~---g--~~~~ad~VI~a~p~~~ 57 (268)
.|.+++.+ + ++|+++++|++|+. ++++.|++.+ | +++.||.||.|.-...
T Consensus 112 ~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~v~v~~~~~~~g~~~~~~ad~vV~AdG~~S 169 (410)
T 3c96_A 112 ILLAAVRERLGQQAVRTGLGVERIEE-RDGRVLIGARDGHGKPQALGADVLVGADGIHS 169 (410)
T ss_dssp HHHHHHHHHHCTTSEEESEEEEEEEE-ETTEEEEEEEETTSCEEEEEESEEEECCCTTC
T ss_pred HHHHHHHhhCCCcEEEECCEEEEEec-CCccEEEEecCCCCCceEEecCEEEECCCccc
Confidence 34455543 3 58999999999998 7778777654 7 5789999999987654
No 123
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=89.14 E-value=0.87 Score=38.76 Aligned_cols=38 Identities=32% Similarity=0.437 Sum_probs=32.1
Q ss_pred CCceeeCcceeEEEEcCCceEEEEcCCcEEEeCEEEEecChh
Q 024393 15 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 56 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~ 56 (268)
+++|+++++|.+|+ + + .|++.+|+++.+|.||+++...
T Consensus 201 GV~i~~~~~v~~i~-~-~--~v~~~~g~~i~~D~vi~a~G~~ 238 (408)
T 2gqw_A 201 GVDLRFERSVTGSV-D-G--VVLLDDGTRIAADMVVVGIGVL 238 (408)
T ss_dssp TCEEEESCCEEEEE-T-T--EEEETTSCEEECSEEEECSCEE
T ss_pred CcEEEeCCEEEEEE-C-C--EEEECCCCEEEcCEEEECcCCC
Confidence 67999999999999 3 3 6667788899999999998753
No 124
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=89.10 E-value=0.75 Score=37.41 Aligned_cols=40 Identities=13% Similarity=0.138 Sum_probs=34.7
Q ss_pred CCceeeCcceeEEEEcCC-ceEEEEcCCcEEEeCEEEEecCh
Q 024393 15 GLDIRLGHRVTKITRHYI-GVKVTVEGGKTFVADAVVVAVPL 55 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~-~v~v~~~~g~~~~ad~VI~a~p~ 55 (268)
+++++++++|.+|+.+++ .+.|.+.+|+ +.+|+||+|+-.
T Consensus 81 ~~~~~~~~~v~~i~~~~~~~~~v~~~~g~-~~~d~vVlAtG~ 121 (332)
T 3lzw_A 81 DQTICLEQAVESVEKQADGVFKLVTNEET-HYSKTVIITAGN 121 (332)
T ss_dssp CCEEECSCCEEEEEECTTSCEEEEESSEE-EEEEEEEECCTT
T ss_pred CCcEEccCEEEEEEECCCCcEEEEECCCE-EEeCEEEECCCC
Confidence 457999999999998877 6888888875 999999999976
No 125
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=89.08 E-value=0.79 Score=39.85 Aligned_cols=42 Identities=21% Similarity=0.428 Sum_probs=34.2
Q ss_pred CCceeeCcceeEEEEcCCc-eEEEE-----cCCcEEEeCEEEEecChh
Q 024393 15 GLDIRLGHRVTKITRHYIG-VKVTV-----EGGKTFVADAVVVAVPLG 56 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~-v~v~~-----~~g~~~~ad~VI~a~p~~ 56 (268)
+++|+++++|.+|+.++++ +.+.. .+++++.+|.||+++...
T Consensus 234 Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~ 281 (474)
T 1zmd_A 234 GFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRR 281 (474)
T ss_dssp TCEEECSEEEEEEEECTTSCEEEEEEETTSCCCEEEEESEEEECSCEE
T ss_pred CCEEEeCceEEEEEEcCCceEEEEEEecCCCCceEEEcCEEEECcCCC
Confidence 6799999999999987766 66663 456789999999998653
No 126
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=89.06 E-value=0.99 Score=36.46 Aligned_cols=40 Identities=28% Similarity=0.423 Sum_probs=34.3
Q ss_pred CCceeeCcceeEEEEcCCceEEEEcCCcEEEeCEEEEecCh
Q 024393 15 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 55 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~ 55 (268)
++++++ ++|.+|+.+++++.+.+.+|+++.+|+||+|+-.
T Consensus 73 ~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~~~vv~AtG~ 112 (311)
T 2q0l_A 73 GLKHEM-TAVQRVSKKDSHFVILAEDGKTFEAKSVIIATGG 112 (311)
T ss_dssp SCEEEC-SCEEEEEEETTEEEEEETTSCEEEEEEEEECCCE
T ss_pred CCEEEE-EEEEEEEEcCCEEEEEEcCCCEEECCEEEECCCC
Confidence 467887 7999999888888888888889999999999974
No 127
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=88.83 E-value=0.51 Score=39.97 Aligned_cols=39 Identities=15% Similarity=0.210 Sum_probs=32.7
Q ss_pred CCceeeCcceeEEEEcCCceEEEEcCCcEEEeCEEEEecCh
Q 024393 15 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 55 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~ 55 (268)
+++++++++|++|+.+++ .|++.+|+++.+|++|+|+-.
T Consensus 76 ~i~~~~~~~V~~id~~~~--~v~~~~g~~~~yd~lvlAtG~ 114 (385)
T 3klj_A 76 NIKVITSEFATSIDPNNK--LVTLKSGEKIKYEKLIIASGS 114 (385)
T ss_dssp TCEEECSCCEEEEETTTT--EEEETTSCEEECSEEEECCCE
T ss_pred CCEEEeCCEEEEEECCCC--EEEECCCCEEECCEEEEecCC
Confidence 567999999999998766 456678889999999999865
No 128
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=88.77 E-value=1.1 Score=36.39 Aligned_cols=43 Identities=14% Similarity=0.276 Sum_probs=32.7
Q ss_pred cCCceeeCcceeEEEEcCCceE-EEEcC----C--cEEEeCEEEEecChh
Q 024393 14 KGLDIRLGHRVTKITRHYIGVK-VTVEG----G--KTFVADAVVVAVPLG 56 (268)
Q Consensus 14 ~~l~i~~~~~V~~I~~~~~~v~-v~~~~----g--~~~~ad~VI~a~p~~ 56 (268)
.+++|+++++|.+|..+++++. |.+.+ | +++.+|.||+++...
T Consensus 197 ~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~ 246 (320)
T 1trb_A 197 GNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHS 246 (320)
T ss_dssp SSEEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEEECSCEE
T ss_pred CCeEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEEEEeCCC
Confidence 3678999999999998775543 55443 4 578999999998753
No 129
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=88.64 E-value=0.78 Score=39.81 Aligned_cols=41 Identities=22% Similarity=0.326 Sum_probs=34.7
Q ss_pred CceeeCcceeEEEEcC-CceEEEEc--CCc--EEEeCEEEEecChh
Q 024393 16 LDIRLGHRVTKITRHY-IGVKVTVE--GGK--TFVADAVVVAVPLG 56 (268)
Q Consensus 16 l~i~~~~~V~~I~~~~-~~v~v~~~--~g~--~~~ad~VI~a~p~~ 56 (268)
++|+++++|++|+.++ +++.+.+. +|+ ++.+|.||+++...
T Consensus 226 v~i~~~~~v~~i~~~~~~~v~v~~~~~~G~~~~i~~D~vi~a~G~~ 271 (466)
T 3l8k_A 226 LNIKFNSPVTEVKKIKDDEYEVIYSTKDGSKKSIFTNSVVLAAGRR 271 (466)
T ss_dssp CCEECSCCEEEEEEEETTEEEEEECCTTSCCEEEEESCEEECCCEE
T ss_pred EEEEECCEEEEEEEcCCCcEEEEEEecCCceEEEEcCEEEECcCCC
Confidence 8899999999999877 77777776 565 78999999998753
No 130
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=88.60 E-value=0.83 Score=38.29 Aligned_cols=40 Identities=28% Similarity=0.455 Sum_probs=33.8
Q ss_pred CCceeeCcceeEEEEcCCceEEEEcCCcEEEeCEEEEecChhh
Q 024393 15 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGV 57 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~ 57 (268)
+++|+++++|++|+. + + .|++.+|++++||.||.|.-...
T Consensus 121 gv~i~~~~~v~~i~~-~-~-~v~~~~g~~~~ad~vV~AdG~~s 160 (379)
T 3alj_A 121 GVDISVNSEAVAADP-V-G-RLTLQTGEVLEADLIVGADGVGS 160 (379)
T ss_dssp TCEEESSCCEEEEET-T-T-EEEETTSCEEECSEEEECCCTTC
T ss_pred CCEEEeCCEEEEEEe-C-C-EEEECCCCEEEcCEEEECCCccH
Confidence 578999999999987 3 3 77788888999999999987653
No 131
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=88.53 E-value=0.86 Score=41.27 Aligned_cols=41 Identities=27% Similarity=0.163 Sum_probs=34.5
Q ss_pred CCceeeCcceeEEEEcCCceE-EEEcCCcEEEeCEEEEecChh
Q 024393 15 GLDIRLGHRVTKITRHYIGVK-VTVEGGKTFVADAVVVAVPLG 56 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~-v~~~~g~~~~ad~VI~a~p~~ 56 (268)
+++| +++.|+.|..+++++. |.+.+|+++.||.||+|+-..
T Consensus 138 GVeI-~~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLATG~~ 179 (637)
T 2zxi_A 138 NLYI-KQEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGTF 179 (637)
T ss_dssp TEEE-EESCEEEEEESSSBEEEEEETTSCEEECSEEEECCTTC
T ss_pred CCEE-EEeEEEEEEecCCEEEEEEECCCcEEEeCEEEEccCCC
Confidence 4677 6789999998888764 888889899999999999764
No 132
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=88.49 E-value=0.78 Score=39.79 Aligned_cols=49 Identities=35% Similarity=0.489 Sum_probs=36.4
Q ss_pred HHHHHhc-CCceeeCcceeEEEEcCCceEEEEc---CC--cEEEeCEEEEecChh
Q 024393 8 VINTLAK-GLDIRLGHRVTKITRHYIGVKVTVE---GG--KTFVADAVVVAVPLG 56 (268)
Q Consensus 8 l~~~l~~-~l~i~~~~~V~~I~~~~~~v~v~~~---~g--~~~~ad~VI~a~p~~ 56 (268)
+.+.|.+ +++|+++++|.+|+.+++++.+.+. +| +++.+|.||+++...
T Consensus 224 l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~ 278 (470)
T 1dxl_A 224 FQRSLEKQGMKFKLKTKVVGVDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGRT 278 (470)
T ss_dssp HHHHHHHSSCCEECSEEEEEEECSSSSEEEEEEESSSCCCEEEEESEEECCCCEE
T ss_pred HHHHHHHcCCEEEeCCEEEEEEEcCCeEEEEEEecCCCcceEEECCEEEECCCCC
Confidence 3344433 6899999999999987766666654 44 679999999998653
No 133
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=88.46 E-value=0.72 Score=41.05 Aligned_cols=40 Identities=18% Similarity=0.217 Sum_probs=33.7
Q ss_pred eeeCcceeEEEEcCCceEEEEcC---C--cEEEeCEEEEecChhh
Q 024393 18 IRLGHRVTKITRHYIGVKVTVEG---G--KTFVADAVVVAVPLGV 57 (268)
Q Consensus 18 i~~~~~V~~I~~~~~~v~v~~~~---g--~~~~ad~VI~a~p~~~ 57 (268)
|+++++|++|+.++++|.+++.+ | ++++||+||.|.-.+.
T Consensus 152 v~~~~~v~~~~~~~~~v~v~~~~~~~G~~~~i~a~~vVgADG~~S 196 (549)
T 2r0c_A 152 LRTRSRLDSFEQRDDHVRATITDLRTGATRAVHARYLVACDGASS 196 (549)
T ss_dssp EECSEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEEEECCCTTC
T ss_pred cccCcEEEEEEEeCCEEEEEEEECCCCCEEEEEeCEEEECCCCCc
Confidence 99999999999988888877654 6 4789999999887654
No 134
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=88.44 E-value=0.95 Score=40.51 Aligned_cols=41 Identities=44% Similarity=0.416 Sum_probs=30.9
Q ss_pred CCceeeCcceeEEEEcC-CceE-EEE--cCCc--EEEeCEEEEecCh
Q 024393 15 GLDIRLGHRVTKITRHY-IGVK-VTV--EGGK--TFVADAVVVAVPL 55 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~-~~v~-v~~--~~g~--~~~ad~VI~a~p~ 55 (268)
+++|+++++|++|..++ +++. |.. .+|+ ++.||.||+|+-.
T Consensus 269 gv~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg 315 (572)
T 1d4d_A 269 GTDIRLNSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGG 315 (572)
T ss_dssp TCEEESSEEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCC
T ss_pred CCeEEecCEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCC
Confidence 57899999999998877 6543 443 3664 6889999999864
No 135
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=88.32 E-value=0.65 Score=37.67 Aligned_cols=44 Identities=18% Similarity=0.228 Sum_probs=34.4
Q ss_pred HhcCCCCCeeeeecccCCCCCccchhhHHHHHHHHHHHHHHHHHH
Q 024393 198 RLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLER 242 (268)
Q Consensus 198 ~~~~p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i~~~l~~~ 242 (268)
.+++..++||-+||.+..+ ...+..|+..|+.||..|...|...
T Consensus 265 ~~~Ts~pgIyA~GDv~~~~-~~~~~~A~~~G~~AA~~i~~~L~~l 308 (312)
T 4gcm_A 265 DMTTSVPGIFAAGDVRDKG-LRQIVTATGDGSIAAQSAAEYIEHL 308 (312)
T ss_dssp TSBCSSTTEEECSTTBSCS-CCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccCCCCEEEEeecCCCc-chHHHHHHHHHHHHHHHHHHHHHhh
Confidence 4567789999999987642 2357789999999999998776543
No 136
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=88.31 E-value=0.23 Score=42.28 Aligned_cols=41 Identities=22% Similarity=0.229 Sum_probs=28.8
Q ss_pred CCceeeCccee---------EEEEcCCceEEEEcCCcEEEeCEEEEecChh
Q 024393 15 GLDIRLGHRVT---------KITRHYIGVKVTVEGGKTFVADAVVVAVPLG 56 (268)
Q Consensus 15 ~l~i~~~~~V~---------~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~ 56 (268)
+++|+++++|+ +|..+++++.|.+.+| ++.||.||+|+-..
T Consensus 186 Gv~i~~~~~v~~~~g~~~~~~i~~~~~~v~v~~~~g-~i~a~~VV~A~G~~ 235 (405)
T 3c4n_A 186 GAGLLLNTRAELVPGGVRLHRLTVTNTHQIVVHETR-QIRAGVIIVAAGAA 235 (405)
T ss_dssp TCEEECSCEEEEETTEEEEECBCC-------CBCCE-EEEEEEEEECCGGG
T ss_pred CCEEEcCCEEEeccccccccceEeeCCeEEEEECCc-EEECCEEEECCCcc
Confidence 56899999999 8887777777766666 89999999999765
No 137
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=88.27 E-value=0.55 Score=37.92 Aligned_cols=44 Identities=25% Similarity=0.289 Sum_probs=35.4
Q ss_pred HhcCCCCCeeeeecccCCCCCccchhhHHHHHHHHHHHHHHHHHH
Q 024393 198 RLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLER 242 (268)
Q Consensus 198 ~~~~p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i~~~l~~~ 242 (268)
.+++..++||.+||..... +..+..|+..|..||..|...+.++
T Consensus 271 ~~~t~~~~v~a~GD~~~~~-~~~~~~A~~~g~~aa~~i~~~l~~~ 314 (315)
T 3r9u_A 271 KMQTSVAGLFAAGDLRKDA-PKQVICAAGDGAVAALSAMAYIESL 314 (315)
T ss_dssp TCBCSSTTEEECGGGBTTC-CCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CcccCCCCEEEeecccCCc-hhhhhhHHhhHHHHHHHHHHHHHhc
Confidence 3455678999999997532 4578899999999999999887654
No 138
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=88.26 E-value=0.95 Score=36.39 Aligned_cols=50 Identities=12% Similarity=0.072 Sum_probs=35.5
Q ss_pred HHHHHHhc--CCceeeCcceeEEEEcCCceE-EEEc---------CC-----cEEEeCEEEEecChh
Q 024393 7 PVINTLAK--GLDIRLGHRVTKITRHYIGVK-VTVE---------GG-----KTFVADAVVVAVPLG 56 (268)
Q Consensus 7 ~l~~~l~~--~l~i~~~~~V~~I~~~~~~v~-v~~~---------~g-----~~~~ad~VI~a~p~~ 56 (268)
.+.+.+.+ +++|++++.|++|..+++++. |.+. +| .++.||.||+|+-..
T Consensus 124 ~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~ 190 (284)
T 1rp0_A 124 TIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHD 190 (284)
T ss_dssp HHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSS
T ss_pred HHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCc
Confidence 34555543 578999999999998877652 4332 22 578999999988653
No 139
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=88.21 E-value=0.94 Score=39.56 Aligned_cols=49 Identities=37% Similarity=0.502 Sum_probs=36.9
Q ss_pred HHHHHhc-CCceeeCcceeEEEEcCCceEEEEcC---C--cEEEeCEEEEecChh
Q 024393 8 VINTLAK-GLDIRLGHRVTKITRHYIGVKVTVEG---G--KTFVADAVVVAVPLG 56 (268)
Q Consensus 8 l~~~l~~-~l~i~~~~~V~~I~~~~~~v~v~~~~---g--~~~~ad~VI~a~p~~ 56 (268)
+.+.|.+ +++|+++++|.+|+.+++++.+.+.+ | +++.+|.||+++...
T Consensus 245 l~~~l~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~~ 299 (491)
T 3urh_A 245 LQRMLTKQGIDFKLGAKVTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLIATGRK 299 (491)
T ss_dssp HHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTSCCCEEEEESEEEECCCCE
T ss_pred HHHHHHhCCCEEEECCeEEEEEEeCCEEEEEEEecCCCceEEEEcCEEEEeeCCc
Confidence 3344433 67899999999999888876666542 5 578999999998753
No 140
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=88.07 E-value=1.2 Score=35.45 Aligned_cols=36 Identities=22% Similarity=0.348 Sum_probs=32.0
Q ss_pred CcceeEEEEcCCceEEEEcCCcEEEeCEEEEecChh
Q 024393 21 GHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 56 (268)
Q Consensus 21 ~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~ 56 (268)
+.+|++|+.+++++.|.+.+|+++.+|+||+|+-..
T Consensus 76 ~~~v~~i~~~~~~~~v~~~~g~~~~~d~vviAtG~~ 111 (297)
T 3fbs_A 76 EGRVTDAKGSFGEFIVEIDGGRRETAGRLILAMGVT 111 (297)
T ss_dssp ESCEEEEEEETTEEEEEETTSCEEEEEEEEECCCCE
T ss_pred EeEEEEEEEcCCeEEEEECCCCEEEcCEEEECCCCC
Confidence 569999999888899999899899999999998753
No 141
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=87.93 E-value=1.2 Score=39.17 Aligned_cols=43 Identities=26% Similarity=0.169 Sum_probs=34.8
Q ss_pred CCceeeCcceeEEEEcCCceEEEE---cCCc--EEEeCEEEEecChhh
Q 024393 15 GLDIRLGHRVTKITRHYIGVKVTV---EGGK--TFVADAVVVAVPLGV 57 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~v~~---~~g~--~~~ad~VI~a~p~~~ 57 (268)
+++|+++++|++|..+++.+.|.+ .+|+ ++.||.||.|+-+..
T Consensus 163 Gv~i~~~~~V~~l~~~~~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s 210 (501)
T 2qcu_A 163 GGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPWV 210 (501)
T ss_dssp TCEEECSEEEEEEEEETTEEEEEEEETTTCCEEEEEESCEEECCGGGH
T ss_pred CCEEEcCcEEEEEEEeCCEEEEEEEECCCCCEEEEECCEEEECCChhH
Confidence 578999999999998876566766 3565 789999999997764
No 142
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=87.82 E-value=1.4 Score=38.59 Aligned_cols=42 Identities=14% Similarity=0.119 Sum_probs=35.0
Q ss_pred CCceeeCcceeEEEEcCCc--eEEEEcCCcEEEeCEEEEecChhh
Q 024393 15 GLDIRLGHRVTKITRHYIG--VKVTVEGGKTFVADAVVVAVPLGV 57 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~--v~v~~~~g~~~~ad~VI~a~p~~~ 57 (268)
+++++.+ +|++|+.++++ +.|++.+|++++||.||.|.-...
T Consensus 187 gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S 230 (511)
T 2weu_A 187 GVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRG 230 (511)
T ss_dssp TCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGC
T ss_pred CCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcch
Confidence 6789999 99999986554 668888888899999999997754
No 143
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=87.75 E-value=0.85 Score=39.67 Aligned_cols=42 Identities=31% Similarity=0.418 Sum_probs=33.0
Q ss_pred CCceeeCcceeEEEE--cCCceEEEEc-----CCcEEEeCEEEEecChh
Q 024393 15 GLDIRLGHRVTKITR--HYIGVKVTVE-----GGKTFVADAVVVAVPLG 56 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~--~~~~v~v~~~-----~g~~~~ad~VI~a~p~~ 56 (268)
+++|+++++|++|+. +++.+.+.+. +++++.+|.||+++...
T Consensus 238 gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~ 286 (478)
T 1v59_A 238 GLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRR 286 (478)
T ss_dssp TCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCEE
T ss_pred CCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCCC
Confidence 678999999999997 5555666654 34678999999998643
No 144
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=87.63 E-value=0.47 Score=38.78 Aligned_cols=40 Identities=23% Similarity=0.276 Sum_probs=34.0
Q ss_pred CCceeeCcceeEEEEcCCceEEEEc---CCcEEEeCEEEEecCh
Q 024393 15 GLDIRLGHRVTKITRHYIGVKVTVE---GGKTFVADAVVVAVPL 55 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~v~~~---~g~~~~ad~VI~a~p~ 55 (268)
++++++++ |.+|+.+++.+.+.+. +++++.+|+||+|+-.
T Consensus 98 gv~i~~~~-v~~i~~~~~~~~v~~~~~~~~~~~~~d~vvlAtG~ 140 (338)
T 3itj_A 98 GTEIITET-VSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGA 140 (338)
T ss_dssp TCEEECSC-EEEEECSSSSEEEEETTCSSSCCEEEEEEEECCCE
T ss_pred CCEEEEeE-EEEEEEcCCEEEEEEEecCCCcEEEeCEEEECcCC
Confidence 56899998 9999998888888773 6678999999999865
No 145
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=87.55 E-value=0.76 Score=39.02 Aligned_cols=37 Identities=24% Similarity=0.480 Sum_probs=31.0
Q ss_pred CCceeeCcceeEEEEcCCceEEEEcCCcEEEeCEEEEecCh
Q 024393 15 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 55 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~ 55 (268)
+++++++++|++|+.+ + |.+.+|+++.+|.||++++.
T Consensus 232 gV~~~~~~~v~~i~~~--~--v~~~~g~~~~~D~vi~a~G~ 268 (409)
T 3h8l_A 232 GIKLVHNFKIKEIREH--E--IVDEKGNTIPADITILLPPY 268 (409)
T ss_dssp TCEEECSCCEEEECSS--E--EEETTSCEEECSEEEEECCE
T ss_pred CCEEEcCCceEEECCC--e--EEECCCCEEeeeEEEECCCC
Confidence 5889999999999743 2 66778889999999999874
No 146
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=87.54 E-value=1.1 Score=36.13 Aligned_cols=42 Identities=14% Similarity=0.158 Sum_probs=34.6
Q ss_pred CCceeeCcceeEEEEcC---CceEEEEcCCcEEEeCEEEEecChh
Q 024393 15 GLDIRLGHRVTKITRHY---IGVKVTVEGGKTFVADAVVVAVPLG 56 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~---~~v~v~~~~g~~~~ad~VI~a~p~~ 56 (268)
+++++++++|.+|..+. +.+.|.+.+|+++.+|+||+|+-..
T Consensus 70 ~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~ 114 (310)
T 1fl2_A 70 DVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAK 114 (310)
T ss_dssp CEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEE
T ss_pred CCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCC
Confidence 45799999999998653 3578888888889999999998753
No 147
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=86.91 E-value=1.6 Score=35.55 Aligned_cols=42 Identities=12% Similarity=-0.005 Sum_probs=31.7
Q ss_pred CCceeeCcceeEEEEcCCceEEEEc---CC--cEEEeCEEEEecChh
Q 024393 15 GLDIRLGHRVTKITRHYIGVKVTVE---GG--KTFVADAVVVAVPLG 56 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~v~~~---~g--~~~~ad~VI~a~p~~ 56 (268)
++++++++.|.+|+.+++...|.+. +| +++.+|.||+++...
T Consensus 205 gv~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 251 (335)
T 2zbw_A 205 RLEVLTPYELRRVEGDERVRWAVVFHNQTQEELALEVDAVLILAGYI 251 (335)
T ss_dssp SSEEETTEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred CeEEecCCcceeEccCCCeeEEEEEECCCCceEEEecCEEEEeecCC
Confidence 6899999999999985432235444 66 578999999998753
No 148
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=86.87 E-value=1 Score=38.87 Aligned_cols=48 Identities=23% Similarity=0.296 Sum_probs=36.0
Q ss_pred HHHHHHhcCCceeeCcceeEEEEcCCceEEEEcCCcEEEeCEEEEecCh
Q 024393 7 PVINTLAKGLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 55 (268)
Q Consensus 7 ~l~~~l~~~l~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~ 55 (268)
.+.+.|.+.+++++++.|.+|+.++ ++.....+|+++.+|.||+++..
T Consensus 195 ~l~~~l~~~v~i~~~~~v~~i~~~~-~v~~v~~~g~~i~~D~Vv~a~G~ 242 (449)
T 3kd9_A 195 ILEEKLKKHVNLRLQEITMKIEGEE-RVEKVVTDAGEYKAELVILATGI 242 (449)
T ss_dssp HHHHHHTTTSEEEESCCEEEEECSS-SCCEEEETTEEEECSEEEECSCE
T ss_pred HHHHHHHhCcEEEeCCeEEEEeccC-cEEEEEeCCCEEECCEEEEeeCC
Confidence 3445565568899999999998665 44433557788999999999864
No 149
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=86.74 E-value=1.3 Score=38.40 Aligned_cols=42 Identities=24% Similarity=0.155 Sum_probs=33.3
Q ss_pred CCc--eeeCcceeEEEEcCC--ceEEEEcC---C--cEEEeCEEEEecChh
Q 024393 15 GLD--IRLGHRVTKITRHYI--GVKVTVEG---G--KTFVADAVVVAVPLG 56 (268)
Q Consensus 15 ~l~--i~~~~~V~~I~~~~~--~v~v~~~~---g--~~~~ad~VI~a~p~~ 56 (268)
+++ |++++.|++|+..++ +|.|++.+ | +++.||+||+|+-..
T Consensus 115 gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvAtG~~ 165 (464)
T 2xve_A 115 GVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCCTGHF 165 (464)
T ss_dssp TCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECCCSS
T ss_pred CCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEECCCCC
Confidence 455 999999999998766 67776654 4 578999999999853
No 150
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=86.61 E-value=0.82 Score=36.97 Aligned_cols=44 Identities=32% Similarity=0.273 Sum_probs=34.8
Q ss_pred cCCCCCeeeeecccCCC-CCccchhhHHHHHHHHHHHHHHHHHHh
Q 024393 200 RIPVDNLFFAGEATSMS-YPGSVHGAFSTGLMAAEDCRMRVLERY 243 (268)
Q Consensus 200 ~~p~~~l~~aG~~~~~~-~~g~~~gA~~Sg~~aa~~i~~~l~~~~ 243 (268)
++..++||.+||..... .+..+..|+..|..||..|...+.++.
T Consensus 276 ~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~~ 320 (323)
T 3f8d_A 276 RTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTEKK 320 (323)
T ss_dssp BCSSTTEEECSTTBSTTTTCCCHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred eecCCCEEEcceecCCCCcccceeehhhHHHHHHHHHHHHHHHhh
Confidence 34568999999998631 135788999999999999999887653
No 151
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=86.47 E-value=1.2 Score=40.50 Aligned_cols=41 Identities=27% Similarity=0.207 Sum_probs=34.2
Q ss_pred CCceeeCcceeEEEEcCCce-EEEEcCCcEEEeCEEEEecChh
Q 024393 15 GLDIRLGHRVTKITRHYIGV-KVTVEGGKTFVADAVVVAVPLG 56 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v-~v~~~~g~~~~ad~VI~a~p~~ 56 (268)
+++| +++.|+.|..+++++ .|.+.+|+++.||.||+|+-..
T Consensus 139 GV~I-~~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt~ 180 (651)
T 3ces_A 139 NLMI-FQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTF 180 (651)
T ss_dssp TEEE-EECCEEEEEESSSBEEEEEETTSEEEEEEEEEECCSTT
T ss_pred CCEE-EEEEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCCC
Confidence 4678 678999999888775 5888888889999999999764
No 152
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=86.43 E-value=1.6 Score=38.03 Aligned_cols=48 Identities=15% Similarity=0.097 Sum_probs=35.2
Q ss_pred HHHHHhc-CCceeeCcceeEEEEcCC-ceEEEEcCCc-----EEEeCEEEEecCh
Q 024393 8 VINTLAK-GLDIRLGHRVTKITRHYI-GVKVTVEGGK-----TFVADAVVVAVPL 55 (268)
Q Consensus 8 l~~~l~~-~l~i~~~~~V~~I~~~~~-~v~v~~~~g~-----~~~ad~VI~a~p~ 55 (268)
+.+.|.+ +++|++++.|.+|+..++ .+.|++.+++ ++.+|.||+++..
T Consensus 233 l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~ 287 (483)
T 3dgh_A 233 VAASMEERGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGR 287 (483)
T ss_dssp HHHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCE
T ss_pred HHHHHHhCCCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECccc
Confidence 3344433 689999999999998654 4666665543 7899999999864
No 153
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=86.41 E-value=0.45 Score=39.56 Aligned_cols=42 Identities=29% Similarity=0.374 Sum_probs=36.0
Q ss_pred CCceeeCcceeEEEEcCC-ceEEEEcCCcEEEeCEEEEecChh
Q 024393 15 GLDIRLGHRVTKITRHYI-GVKVTVEGGKTFVADAVVVAVPLG 56 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~-~v~v~~~~g~~~~ad~VI~a~p~~ 56 (268)
+++++++++|++|+.+++ .+.|.+.+|+++.+|+||+|+-..
T Consensus 88 ~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~~ 130 (360)
T 3ab1_A 88 NPDVVLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGLG 130 (360)
T ss_dssp CCEEECSCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCTTC
T ss_pred CCEEEcCCEEEEEEECCCceEEEEECCCcEEEeeEEEEccCCC
Confidence 457999999999998765 688888888899999999999763
No 154
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=86.00 E-value=0.88 Score=36.32 Aligned_cols=40 Identities=25% Similarity=0.347 Sum_probs=33.6
Q ss_pred cCCCCCeeeeecccCCCCCccchhhHHHHHHHHHHHHHHHHH
Q 024393 200 RIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLE 241 (268)
Q Consensus 200 ~~p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i~~~l~~ 241 (268)
++..++||.+||.... +..+..|+..|..||..|...+..
T Consensus 254 ~t~~~~vya~GD~~~~--~~~~~~A~~~g~~aa~~i~~~l~~ 293 (297)
T 3fbs_A 254 QTTARGIFACGDVARP--AGSVALAVGDGAMAGAAAHRSILF 293 (297)
T ss_dssp BCSSTTEEECSGGGCT--TCCHHHHHHHHHHHHHHHHHHHHC
T ss_pred ccCCCCEEEEeecCCc--hHHHHHHHHhHHHHHHHHHHHHhh
Confidence 4557899999999874 357899999999999999887754
No 155
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=85.91 E-value=1.2 Score=36.44 Aligned_cols=40 Identities=30% Similarity=0.286 Sum_probs=33.8
Q ss_pred CCceeeCcceeEEEEcCCceEEEEcCCcEEEeCEEEEecChh
Q 024393 15 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 56 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~ 56 (268)
++++++++ |.+|+.+++.+.|.+ +|+++.+|+||+|+-..
T Consensus 84 gv~~~~~~-v~~i~~~~~~~~v~~-~~~~~~~~~vv~A~G~~ 123 (333)
T 1vdc_A 84 GTTIFTET-VTKVDFSSKPFKLFT-DSKAILADAVILAIGAV 123 (333)
T ss_dssp TCEEECCC-CCEEECSSSSEEEEC-SSEEEEEEEEEECCCEE
T ss_pred CCEEEEeE-EEEEEEcCCEEEEEE-CCcEEEcCEEEECCCCC
Confidence 56799887 999998888888877 77889999999998754
No 156
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=85.79 E-value=0.9 Score=36.73 Aligned_cols=43 Identities=26% Similarity=0.357 Sum_probs=33.0
Q ss_pred HhcCCCCCeeeeecccCCCCCccchhhHHHHHHHHHHHHHHHHH
Q 024393 198 RLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLE 241 (268)
Q Consensus 198 ~~~~p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i~~~l~~ 241 (268)
.+++..++||-|||.+...+ ..+.-|+..|..||..+.+.|+.
T Consensus 271 ~~~Ts~pgIyA~GDv~~~~~-~~~~~A~~~G~~AA~~~~~yL~~ 313 (314)
T 4a5l_A 271 GPKTSVDGVFACGDVCDRVY-RQAIVAAGSGCMAALSCEKWLQT 313 (314)
T ss_dssp TTBCSSTTEEECSTTTCSSC-CCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCccCCCCEEEEEeccCCcc-hHHHHHHHHHHHHHHHHHHHHhc
Confidence 35677899999999886531 24567888999999999877754
No 157
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=85.78 E-value=1.6 Score=35.13 Aligned_cols=49 Identities=12% Similarity=0.179 Sum_probs=36.0
Q ss_pred HHHHHHh--cCCceeeCcceeEEEEcCCce-EEEEc---CCc--EEEeCEEEEecCh
Q 024393 7 PVINTLA--KGLDIRLGHRVTKITRHYIGV-KVTVE---GGK--TFVADAVVVAVPL 55 (268)
Q Consensus 7 ~l~~~l~--~~l~i~~~~~V~~I~~~~~~v-~v~~~---~g~--~~~ad~VI~a~p~ 55 (268)
.+.+.|. .+++|+++++|.+|..+++++ .|.+. +|+ ++.+|.||+++..
T Consensus 183 ~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 239 (311)
T 2q0l_A 183 ITLEHAKNNDKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGFFIFVGY 239 (311)
T ss_dssp HHHHHHHTCTTEEEETTEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred HHHHHHhhCCCeEEEeCCEEEEEECCCCcEeEEEEEecCCCceEEEecCEEEEEecC
Confidence 4556665 378899999999999875654 34443 564 6899999998864
No 158
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=85.68 E-value=0.98 Score=36.47 Aligned_cols=43 Identities=19% Similarity=0.171 Sum_probs=34.3
Q ss_pred hcCCCCCeeeeecccCCCCCccchhhHHHHHHHHHHHHHHHHHH
Q 024393 199 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLER 242 (268)
Q Consensus 199 ~~~p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i~~~l~~~ 242 (268)
+++..++||.+||..... ......|+..|..||..|...|..+
T Consensus 265 ~~t~~~~vya~GD~~~~~-~~~~~~A~~~g~~aa~~i~~~l~~~ 307 (310)
T 1fl2_A 265 CETNVKGVFAAGDCTTVP-YKQIIIATGEGAKASLSAFDYLIRT 307 (310)
T ss_dssp CBCSSTTEEECSTTBSCS-SCCHHHHHHHHHHHHHHHHHHHHHS
T ss_pred CccCCCCEEEeecccCCc-chhhhhhHhhHHHHHHHHHHHHHHh
Confidence 345578999999998753 2467889999999999999887653
No 159
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=85.63 E-value=1.5 Score=37.78 Aligned_cols=40 Identities=20% Similarity=0.129 Sum_probs=31.6
Q ss_pred CceeeCcceeEEEEc---CCc--eEEEEcCCc----EEEeCEEEEecCh
Q 024393 16 LDIRLGHRVTKITRH---YIG--VKVTVEGGK----TFVADAVVVAVPL 55 (268)
Q Consensus 16 l~i~~~~~V~~I~~~---~~~--v~v~~~~g~----~~~ad~VI~a~p~ 55 (268)
++|+++++|++|+.+ ++. +.|.+.+|+ ++.+|+||+|+-.
T Consensus 142 ~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG~ 190 (463)
T 3s5w_A 142 EQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSPGG 190 (463)
T ss_dssp TTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEECCCC
T ss_pred CeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEECCCC
Confidence 479999999999986 333 367666665 8999999999864
No 160
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=85.48 E-value=1.4 Score=39.38 Aligned_cols=39 Identities=13% Similarity=0.301 Sum_probs=32.3
Q ss_pred CCceeeCcceeEEEEcCCceEEEEcCCcEEEeCEEEEecCh
Q 024393 15 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 55 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~ 55 (268)
+++|+++++|++|+.++++ |.+.+|+++.+|.||+++..
T Consensus 242 GV~i~~~~~v~~i~~~~~~--v~~~~g~~i~~D~Vi~a~G~ 280 (588)
T 3ics_A 242 DVELVFEDGVDALEENGAV--VRLKSGSVIQTDMLILAIGV 280 (588)
T ss_dssp TCEEECSCCEEEEEGGGTE--EEETTSCEEECSEEEECSCE
T ss_pred CCEEEECCeEEEEecCCCE--EEECCCCEEEcCEEEEccCC
Confidence 6789999999999876553 55678889999999998853
No 161
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=85.10 E-value=0.7 Score=37.43 Aligned_cols=44 Identities=30% Similarity=0.303 Sum_probs=33.9
Q ss_pred HhcCCCCCeeeeecccCCCCCccchhhHHHHHHHHHHHHHHHHHH
Q 024393 198 RLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLER 242 (268)
Q Consensus 198 ~~~~p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i~~~l~~~ 242 (268)
.+++..++||-|||.+..+ ...+..|+..|..||..|...|.++
T Consensus 259 ~~~Ts~p~IyA~GDv~~~~-~~~~~~A~~~G~~AA~~i~~~L~~e 302 (304)
T 4fk1_A 259 FGRTSEKNIYLAGETTTQG-PSSLIIAASQGNKAAIAINSDITDE 302 (304)
T ss_dssp TCBCSSTTEEECSHHHHTS-CCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccCCCCEEEEeccCCCc-chHHHHHHHHHHHHHHHHHHHHhhc
Confidence 3466789999999987542 2246678999999999998887653
No 162
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=85.03 E-value=1.5 Score=39.85 Aligned_cols=41 Identities=24% Similarity=0.307 Sum_probs=33.9
Q ss_pred CCceeeCcceeEEEEcCCceE-EEEcCCcEEEeCEEEEecChh
Q 024393 15 GLDIRLGHRVTKITRHYIGVK-VTVEGGKTFVADAVVVAVPLG 56 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~-v~~~~g~~~~ad~VI~a~p~~ 56 (268)
+++| ++..|+.|..+++++. |.+.+|+++.||.||+|+-..
T Consensus 132 GV~I-~~~~V~~L~~d~g~V~GV~t~~G~~i~Ad~VVLATG~~ 173 (641)
T 3cp8_A 132 NIDL-LQDTVIGVSANSGKFSSVTVRSGRAIQAKAAILACGTF 173 (641)
T ss_dssp TEEE-EECCEEEEEEETTEEEEEEETTSCEEEEEEEEECCTTC
T ss_pred CCEE-EeeEEEEEEecCCEEEEEEECCCcEEEeCEEEECcCCC
Confidence 4677 4569999998888876 888888899999999998754
No 163
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=84.91 E-value=0.83 Score=37.15 Aligned_cols=42 Identities=24% Similarity=0.241 Sum_probs=33.7
Q ss_pred hcCCCCCeeeeecccCCCCCccchhhHHHHHHHHHHHHHHHHH
Q 024393 199 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLE 241 (268)
Q Consensus 199 ~~~p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i~~~l~~ 241 (268)
+++..++||.+||..... ......|+..|..||..|...|.+
T Consensus 276 ~~t~~~~vya~GD~~~~~-~~~~~~A~~~g~~aa~~i~~~l~~ 317 (319)
T 3cty_A 276 QRTSVPGVYAAGDVTSGN-FAQIASAVGDGCKAALSLYSDSIS 317 (319)
T ss_dssp CBCSSTTEEECSTTBTTC-CCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred CccCCCCEEEeecccCcc-hhhHHHHHHHHHHHHHHHHHHhhc
Confidence 445678999999998753 246788999999999999887754
No 164
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=84.76 E-value=1.5 Score=39.19 Aligned_cols=43 Identities=23% Similarity=0.022 Sum_probs=34.0
Q ss_pred CCceeeCcceeEEEEcCCceE-EEEc---CC--cEEEeCEEEEecChhh
Q 024393 15 GLDIRLGHRVTKITRHYIGVK-VTVE---GG--KTFVADAVVVAVPLGV 57 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~-v~~~---~g--~~~~ad~VI~a~p~~~ 57 (268)
+++|+++++|++|..+++++. |++. +| .++.||.||.|+-+..
T Consensus 184 G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 184 GAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWV 232 (561)
T ss_dssp TCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGH
T ss_pred CCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcch
Confidence 678999999999999888743 5554 24 4789999999997653
No 165
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=84.73 E-value=1.3 Score=36.70 Aligned_cols=49 Identities=10% Similarity=0.207 Sum_probs=36.9
Q ss_pred HHHHHHhc--CCceeeCcceeEEEEcCCceEEEEcCCcEEE-eCEEEEecCh
Q 024393 7 PVINTLAK--GLDIRLGHRVTKITRHYIGVKVTVEGGKTFV-ADAVVVAVPL 55 (268)
Q Consensus 7 ~l~~~l~~--~l~i~~~~~V~~I~~~~~~v~v~~~~g~~~~-ad~VI~a~p~ 55 (268)
.+.+.|.+ ++++++++.|.+|+.+++++.+.+.+|+++. +|.||+++..
T Consensus 219 ~l~~~l~~~g~v~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~d~vi~a~G~ 270 (369)
T 3d1c_A 219 RLGNVIKQGARIEMNVHYTVKDIDFNNGQYHISFDSGQSVHTPHEPILATGF 270 (369)
T ss_dssp HHHHHHHTTCCEEEECSCCEEEEEEETTEEEEEESSSCCEEESSCCEECCCB
T ss_pred HHHHHHhhCCcEEEecCcEEEEEEecCCceEEEecCCeEeccCCceEEeecc
Confidence 34444443 3899999999999877777778888887665 5999998764
No 166
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=84.67 E-value=1.7 Score=35.26 Aligned_cols=47 Identities=11% Similarity=0.133 Sum_probs=34.5
Q ss_pred HHHH-hcCCceeeCcceeEEEEcCCceEEEEcC-----CcEEEeCEEEEecCh
Q 024393 9 INTL-AKGLDIRLGHRVTKITRHYIGVKVTVEG-----GKTFVADAVVVAVPL 55 (268)
Q Consensus 9 ~~~l-~~~l~i~~~~~V~~I~~~~~~v~v~~~~-----g~~~~ad~VI~a~p~ 55 (268)
.+.| .++++++++++|.+|+.+++...|.+.+ ++++.+|.||+++..
T Consensus 196 ~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~ 248 (332)
T 3lzw_A 196 VENLHASKVNVLTPFVPAELIGEDKIEQLVLEEVKGDRKEILEIDDLIVNYGF 248 (332)
T ss_dssp HHHHHHSSCEEETTEEEEEEECSSSCCEEEEEETTSCCEEEEECSEEEECCCE
T ss_pred HHHHhcCCeEEEeCceeeEEecCCceEEEEEEecCCCceEEEECCEEEEeecc
Confidence 3444 4478999999999999876654455443 357889999998874
No 167
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=84.62 E-value=2.1 Score=34.72 Aligned_cols=50 Identities=12% Similarity=0.069 Sum_probs=35.0
Q ss_pred HHHHHHHhc--CCceeeCcceeEEEEcCCceEEEEc---CCc--EEEeCEEEEecCh
Q 024393 6 LPVINTLAK--GLDIRLGHRVTKITRHYIGVKVTVE---GGK--TFVADAVVVAVPL 55 (268)
Q Consensus 6 ~~l~~~l~~--~l~i~~~~~V~~I~~~~~~v~v~~~---~g~--~~~ad~VI~a~p~ 55 (268)
..+.+.+.+ +++|+++++|++|..+++...|.+. +|+ ++.+|.||+++..
T Consensus 191 ~~~~~~l~~~~gv~i~~~~~v~~i~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 247 (325)
T 2q7v_A 191 KVAQARAFANPKMKFIWDTAVEEIQGADSVSGVKLRNLKTGEVSELATDGVFIFIGH 247 (325)
T ss_dssp HHHHHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred hHHHHHHHhcCCceEecCCceEEEccCCcEEEEEEEECCCCcEEEEEcCEEEEccCC
Confidence 345566643 6789999999999975432234443 564 7889999998854
No 168
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=84.48 E-value=2.1 Score=37.70 Aligned_cols=42 Identities=12% Similarity=0.116 Sum_probs=34.0
Q ss_pred CCceeeCcceeEEEEcCCc--eEEEEcCCcEEEeCEEEEecChhh
Q 024393 15 GLDIRLGHRVTKITRHYIG--VKVTVEGGKTFVADAVVVAVPLGV 57 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~--v~v~~~~g~~~~ad~VI~a~p~~~ 57 (268)
+++++.+ .|++|+.++++ +.|.+.+|+++.||.||.|.-...
T Consensus 190 Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S 233 (526)
T 2pyx_A 190 GVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKS 233 (526)
T ss_dssp CCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGC
T ss_pred CCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcch
Confidence 6789999 69999987554 457777777899999999997754
No 169
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=84.45 E-value=1.6 Score=38.08 Aligned_cols=46 Identities=17% Similarity=0.398 Sum_probs=33.9
Q ss_pred HHHHHh-cCCceeeCcceeEEEEcCCceE-EEEcCCcEEEeCEEEEecCh
Q 024393 8 VINTLA-KGLDIRLGHRVTKITRHYIGVK-VTVEGGKTFVADAVVVAVPL 55 (268)
Q Consensus 8 l~~~l~-~~l~i~~~~~V~~I~~~~~~v~-v~~~~g~~~~ad~VI~a~p~ 55 (268)
+.+.|. .+++|+++++|++|+. ++++. +.+ +|+++.+|.||+++..
T Consensus 242 l~~~l~~~GV~i~~~~~v~~i~~-~~~v~~v~~-~g~~i~~D~Vi~a~G~ 289 (490)
T 2bc0_A 242 MAKNMEEHGIQLAFGETVKEVAG-NGKVEKIIT-DKNEYDVDMVILAVGF 289 (490)
T ss_dssp HHHHHHTTTCEEEETCCEEEEEC-SSSCCEEEE-SSCEEECSEEEECCCE
T ss_pred HHHHHHhCCeEEEeCCEEEEEEc-CCcEEEEEE-CCcEEECCEEEECCCC
Confidence 334443 3678999999999986 44443 544 6778999999999864
No 170
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=84.43 E-value=0.71 Score=35.89 Aligned_cols=36 Identities=17% Similarity=0.158 Sum_probs=30.7
Q ss_pred CCCCCeeeeecccCCCCCccchhhHHHHHHHHHHHHHHH
Q 024393 201 IPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRV 239 (268)
Q Consensus 201 ~p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i~~~l 239 (268)
+..++||.+||.. . .|....|+.+|+.+|+.|++.|
T Consensus 196 t~~p~iya~G~~a-~--~g~~~~~~~~g~~~a~~i~~~l 231 (232)
T 2cul_A 196 KRLEGLYAVGLCV-R--EGDYARMSEEGKRLAEHLLHEL 231 (232)
T ss_dssp TTSBSEEECGGGT-S--CCCHHHHHHHHHHHHHHHHHHC
T ss_pred cccccceeeeecc-c--CccHHHHHHHHHHHHHHHHhhc
Confidence 3678999999999 4 3578889999999999998765
No 171
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=84.12 E-value=1.4 Score=35.37 Aligned_cols=49 Identities=16% Similarity=0.318 Sum_probs=35.6
Q ss_pred HHHHHh--cCCceeeCcceeEEEEcCCceE-EEEc--CCc--EEEeCEEEEecChh
Q 024393 8 VINTLA--KGLDIRLGHRVTKITRHYIGVK-VTVE--GGK--TFVADAVVVAVPLG 56 (268)
Q Consensus 8 l~~~l~--~~l~i~~~~~V~~I~~~~~~v~-v~~~--~g~--~~~ad~VI~a~p~~ 56 (268)
+.+.+. .+++|+++++|.+|..+++++. +++. +|+ ++.+|.||+++...
T Consensus 188 ~~~~~~~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~~~~~D~vv~a~G~~ 243 (315)
T 3r9u_A 188 TVEKVKKNEKIELITSASVDEVYGDKMGVAGVKVKLKDGSIRDLNVPGIFTFVGLN 243 (315)
T ss_dssp HHHHHHHCTTEEEECSCEEEEEEEETTEEEEEEEECTTSCEEEECCSCEEECSCEE
T ss_pred HHHHHHhcCCeEEEeCcEEEEEEcCCCcEEEEEEEcCCCCeEEeecCeEEEEEcCC
Confidence 444443 3678999999999998876533 4443 775 78899999998753
No 172
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=83.88 E-value=1.3 Score=36.00 Aligned_cols=43 Identities=16% Similarity=0.156 Sum_probs=34.8
Q ss_pred hcCCCCCeeeeecccCCCCCccchhhHHHHHHHHHHHHHHHHHH
Q 024393 199 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLER 242 (268)
Q Consensus 199 ~~~p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i~~~l~~~ 242 (268)
+++..++||.+||..... +.....|...|..||..|...+.++
T Consensus 272 ~~t~~~~vya~GD~~~~~-~~~~~~A~~~g~~aa~~i~~~l~~~ 314 (325)
T 2q7v_A 272 IYTNIPMLFAAGDVSDYI-YRQLATSVGAGTRAAMMTERQLAAL 314 (325)
T ss_dssp TBCSSTTEEECSTTTCSS-CCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CccCCCCEEEeecccCcc-HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 455678999999998642 3478889999999999999887764
No 173
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=83.66 E-value=2.2 Score=36.99 Aligned_cols=49 Identities=14% Similarity=0.135 Sum_probs=35.9
Q ss_pred HHHHHhc-CCceeeCcceeEEEEcCCc--eEEEEcC---C----cEEEeCEEEEecChh
Q 024393 8 VINTLAK-GLDIRLGHRVTKITRHYIG--VKVTVEG---G----KTFVADAVVVAVPLG 56 (268)
Q Consensus 8 l~~~l~~-~l~i~~~~~V~~I~~~~~~--v~v~~~~---g----~~~~ad~VI~a~p~~ 56 (268)
+.+.|.+ +++|++++.|++|+..+++ +.+.+.+ | +++.+|.||+++...
T Consensus 234 ~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~ 292 (478)
T 3dk9_A 234 CTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRV 292 (478)
T ss_dssp HHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEE
T ss_pred HHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeeccc
Confidence 3344433 6799999999999987655 5666654 2 578999999998653
No 174
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=83.44 E-value=2.6 Score=34.12 Aligned_cols=48 Identities=21% Similarity=0.284 Sum_probs=34.5
Q ss_pred HHHHH-hcCCceeeCcceeEEEEcCCce-EEEEc---CCc--EEEeCEEEEecCh
Q 024393 8 VINTL-AKGLDIRLGHRVTKITRHYIGV-KVTVE---GGK--TFVADAVVVAVPL 55 (268)
Q Consensus 8 l~~~l-~~~l~i~~~~~V~~I~~~~~~v-~v~~~---~g~--~~~ad~VI~a~p~ 55 (268)
+.+.+ .++++|+++++|.+|..+++++ .+.+. +|+ ++.+|.||+++..
T Consensus 196 l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 250 (319)
T 3cty_A 196 YVQEIKKRNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIYVGL 250 (319)
T ss_dssp HHHHHHHTTCCEECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCSEEEECCCE
T ss_pred HHHHHhcCCcEEEcCCeEEEEecCCceEEEEEEEEcCCCceEEEecCEEEEeeCC
Confidence 44444 3478999999999999876533 34443 564 6889999999854
No 175
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=83.24 E-value=1.5 Score=35.83 Aligned_cols=42 Identities=29% Similarity=0.264 Sum_probs=34.0
Q ss_pred cCCCCCeeeeecccCCCCCccchhhHHHHHHHHHHHHHHHHHH
Q 024393 200 RIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLER 242 (268)
Q Consensus 200 ~~p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i~~~l~~~ 242 (268)
++..++||.+||..... ......|+..|..||..|...+.++
T Consensus 284 ~t~~~~vya~GD~~~~~-~~~~~~A~~~g~~aa~~i~~~l~~~ 325 (333)
T 1vdc_A 284 QTSVPGVFAAGDVQDKK-YRQAITAAGTGCMAALDAEHYLQEI 325 (333)
T ss_dssp BCSSTTEEECGGGGCSS-CCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred ccCCCCEEEeeeccCCC-chhHHHHHHhHHHHHHHHHHHHHhc
Confidence 45678999999998753 2467789999999999999887654
No 176
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=82.49 E-value=1.3 Score=35.89 Aligned_cols=41 Identities=22% Similarity=0.199 Sum_probs=33.2
Q ss_pred cCCCCCeeeeecccCCCCCccchhhHHHHHHHHHHHHHHHHH
Q 024393 200 RIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLE 241 (268)
Q Consensus 200 ~~p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i~~~l~~ 241 (268)
++..++||.+||..... ......|+..|..||..|...|.+
T Consensus 275 ~t~~~~vya~GD~~~~~-~~~~~~A~~~g~~aa~~i~~~l~~ 315 (320)
T 1trb_A 275 QTSIPGVFAAGDVMDHI-YRQAITSAGTGCMAALDAERYLDG 315 (320)
T ss_dssp BCSSTTEEECGGGGCSS-SCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred cCCCCCEEEcccccCCc-chhhhhhhccHHHHHHHHHHHHHh
Confidence 45578999999998753 246778999999999999887754
No 177
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=82.43 E-value=2 Score=35.19 Aligned_cols=43 Identities=21% Similarity=0.195 Sum_probs=34.5
Q ss_pred cCCCCCeeeeecccCCCCCccchhhHHHHHHHHHHHHHHHHHHh
Q 024393 200 RIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLERY 243 (268)
Q Consensus 200 ~~p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i~~~l~~~~ 243 (268)
++..++||.+||..... ......|+..|..||..|...|..+.
T Consensus 277 ~t~~~~iya~GD~~~~~-~~~~~~A~~~g~~aA~~i~~~l~~~~ 319 (335)
T 2a87_A 277 STSLPGVFAAGDLVDRT-YRQAVTAAGSGCAAAIDAERWLAEHA 319 (335)
T ss_dssp BCSSTTEEECGGGTCCS-CCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCEEEeeecCCcc-HHHHHHHHHhHHHHHHHHHHHhhcCc
Confidence 45678999999998753 24677899999999999998877653
No 178
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=82.28 E-value=1.6 Score=37.83 Aligned_cols=42 Identities=24% Similarity=0.176 Sum_probs=35.0
Q ss_pred hcCCCCCeeeeecccCCCCCccchhhHHHHHHHHHHHHHHHHHH
Q 024393 199 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLER 242 (268)
Q Consensus 199 ~~~p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i~~~l~~~ 242 (268)
+++..++||.+||.... +..+..|+..|+.||..|...|..+
T Consensus 405 ~~Ts~~~VfA~GD~~~g--~~~v~~A~~~G~~aA~~i~~~L~~~ 446 (456)
T 2vdc_G 405 KMTNMDGVFAAGDIVRG--ASLVVWAIRDGRDAAEGIHAYAKAK 446 (456)
T ss_dssp CBCSSTTEEECGGGGSS--CCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCCCCEEEeccccCC--chHHHHHHHHHHHHHHHHHHHhhcC
Confidence 44567899999999865 3578899999999999999888765
No 179
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=82.27 E-value=3 Score=36.84 Aligned_cols=42 Identities=17% Similarity=0.258 Sum_probs=34.5
Q ss_pred CCceeeCcceeEEEEcCCc--eEEEEcCCcEEEeCEEEEecChhh
Q 024393 15 GLDIRLGHRVTKITRHYIG--VKVTVEGGKTFVADAVVVAVPLGV 57 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~--v~v~~~~g~~~~ad~VI~a~p~~~ 57 (268)
+++++.+ +|++|..++++ +.|.+.+|+++.||.||.|.-...
T Consensus 179 gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s 222 (538)
T 2aqj_A 179 GVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRG 222 (538)
T ss_dssp TCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGC
T ss_pred CCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCch
Confidence 5789999 89999986554 568888888899999999997754
No 180
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=81.93 E-value=1 Score=36.92 Aligned_cols=42 Identities=12% Similarity=0.203 Sum_probs=32.7
Q ss_pred hcCCCCCeeeee--cccCCCCCccchhhHHHHHHHHHHHHHHHHH
Q 024393 199 LRIPVDNLFFAG--EATSMSYPGSVHGAFSTGLMAAEDCRMRVLE 241 (268)
Q Consensus 199 ~~~p~~~l~~aG--~~~~~~~~g~~~gA~~Sg~~aa~~i~~~l~~ 241 (268)
..+..++||.+| |...+. ...+.+|...|..+|..|...|+.
T Consensus 310 ~~t~~~~vya~Gd~d~~~~~-~~~~~~A~~~g~~~a~~i~~~l~g 353 (357)
T 4a9w_A 310 RALAVPSVWLLGYGDWNGMA-SATLIGVTRYAREAVRQVTAYCAD 353 (357)
T ss_dssp BBSSCTTEEECSSCGGGSTT-CSSTTTHHHHHHHHHHHHHHHTC-
T ss_pred cCCCCCCeEEeccccccccc-hhhhhhhHHHHHHHHHHHHHHHHh
Confidence 456678999999 555432 467889999999999999887654
No 181
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=81.87 E-value=2.5 Score=37.25 Aligned_cols=43 Identities=21% Similarity=0.265 Sum_probs=34.9
Q ss_pred hcCCCCCeeeeecccCCCCCccchhhHHHHHHHHHHHHHHHHHH
Q 024393 199 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLER 242 (268)
Q Consensus 199 ~~~p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i~~~l~~~ 242 (268)
+++..+++|.+||.....+ ..+..|+..|..||..|...|.+.
T Consensus 476 ~~ts~p~VfA~GD~~~~~~-~~~~~A~~~g~~aa~~i~~~L~~~ 518 (521)
T 1hyu_A 476 CETSVKGVFAAGDCTTVPY-KQIIIATGEGAKASLSAFDYLIRT 518 (521)
T ss_dssp CBCSSTTEEECSTTBCCSS-CCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCEEEeecccCCCc-ceeeehHHhHHHHHHHHHHHHHhh
Confidence 4556789999999987632 467889999999999999887664
No 182
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=81.72 E-value=1.1 Score=39.97 Aligned_cols=39 Identities=21% Similarity=0.333 Sum_probs=33.3
Q ss_pred CCCCeeeeecccCCCCCccchhhHHHHHHHHHHHHHHHHHH
Q 024393 202 PVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLER 242 (268)
Q Consensus 202 p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i~~~l~~~ 242 (268)
.++|||.|||.... .|++-.|..+|..+|+.|+..+...
T Consensus 507 ~~~gly~~GegaG~--a~gi~~Aa~~G~~~a~~i~~~~~~~ 545 (549)
T 3nlc_A 507 NLKGFYPAGEGAGY--AGGILSAGIDGIKVAEAVARDIVAA 545 (549)
T ss_dssp TCBTEEECHHHHTS--CCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCEEEccccCCh--hhHHHHHHHHHHHHHHHHHHHhhhc
Confidence 47899999999854 6889999999999999999887643
No 183
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=81.27 E-value=2.3 Score=36.51 Aligned_cols=40 Identities=33% Similarity=0.375 Sum_probs=31.3
Q ss_pred CCceeeCcceeEEEEcCCce-EEEEcCCcEEEeCEEEEecChh
Q 024393 15 GLDIRLGHRVTKITRHYIGV-KVTVEGGKTFVADAVVVAVPLG 56 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v-~v~~~~g~~~~ad~VI~a~p~~ 56 (268)
+++|+++++|.+|+.+ +++ .+.+ +|+++.+|.||+++...
T Consensus 205 gv~i~~~~~v~~i~~~-~~v~~v~~-~~~~i~~d~vi~a~G~~ 245 (447)
T 1nhp_A 205 NITIATGETVERYEGD-GRVQKVVT-DKNAYDADLVVVAVGVR 245 (447)
T ss_dssp TEEEEESCCEEEEECS-SBCCEEEE-SSCEEECSEEEECSCEE
T ss_pred CCEEEcCCEEEEEEcc-CcEEEEEE-CCCEEECCEEEECcCCC
Confidence 5789999999999876 444 4555 56689999999998643
No 184
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=80.76 E-value=3 Score=34.08 Aligned_cols=39 Identities=28% Similarity=0.378 Sum_probs=32.0
Q ss_pred CCceeeCcceeEEEEcCCceEE-EEcCCcEEEeCEEEEecCh
Q 024393 15 GLDIRLGHRVTKITRHYIGVKV-TVEGGKTFVADAVVVAVPL 55 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~v-~~~~g~~~~ad~VI~a~p~ 55 (268)
++++++++ |.+|+. ++.+.| .+.+|+++.+|+||+|+-.
T Consensus 85 ~v~~~~~~-v~~i~~-~~~~~v~~~~~g~~~~~d~lviAtG~ 124 (335)
T 2a87_A 85 GADLRMED-VESVSL-HGPLKSVVTADGQTHRARAVILAMGA 124 (335)
T ss_dssp TCEEECCC-EEEEEC-SSSSEEEEETTSCEEEEEEEEECCCE
T ss_pred CCEEEEee-EEEEEe-CCcEEEEEeCCCCEEEeCEEEECCCC
Confidence 46788887 999987 556777 7778889999999999875
No 185
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=80.42 E-value=4.1 Score=36.48 Aligned_cols=37 Identities=19% Similarity=0.212 Sum_probs=30.5
Q ss_pred CCeeeeecccCC---CCCccchhhHHHHHHHHHHHHHHHH
Q 024393 204 DNLFFAGEATSM---SYPGSVHGAFSTGLMAAEDCRMRVL 240 (268)
Q Consensus 204 ~~l~~aG~~~~~---~~~g~~~gA~~Sg~~aa~~i~~~l~ 240 (268)
++++++||..+. ..+.+++-|+.+|..+|+.|...+.
T Consensus 347 ~rv~LvGDAAh~~~P~~GqG~~~Ai~da~~LA~~L~~~~~ 386 (584)
T 2gmh_A 347 PGGLLIGCSPGFMNVPKIKGTHTAMKSGTLAAESIFNQLT 386 (584)
T ss_dssp TTEEECTTTTCCCBTTTTBCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEcccccccCccccccHHHHHHHHHHHHHHHHHHHH
Confidence 699999999764 2345899999999999999987653
No 186
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=80.27 E-value=1.6 Score=37.71 Aligned_cols=40 Identities=30% Similarity=0.347 Sum_probs=31.6
Q ss_pred CCceeeCcceeEEEEcCCceEEEEcCC--cEEEeCEEEEecChh
Q 024393 15 GLDIRLGHRVTKITRHYIGVKVTVEGG--KTFVADAVVVAVPLG 56 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~v~~~~g--~~~~ad~VI~a~p~~ 56 (268)
+++|+++++|++|+. ++ +.+...+| +++.+|.||+++...
T Consensus 226 gv~i~~~~~v~~i~~-~~-v~v~~~~G~~~~i~~D~vv~a~G~~ 267 (458)
T 1lvl_A 226 GIALHLGHSVEGYEN-GC-LLANDGKGGQLRLEADRVLVAVGRR 267 (458)
T ss_dssp TCEEETTCEEEEEET-TE-EEEECSSSCCCEECCSCEEECCCEE
T ss_pred CCEEEECCEEEEEEe-CC-EEEEECCCceEEEECCEEEECcCCC
Confidence 689999999999986 33 66654456 689999999998753
No 187
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=80.10 E-value=4.4 Score=35.19 Aligned_cols=40 Identities=25% Similarity=0.290 Sum_probs=31.0
Q ss_pred CCceeeCcceeEEEEcCCce-EEEEcCCcEEEeCEEEEecChh
Q 024393 15 GLDIRLGHRVTKITRHYIGV-KVTVEGGKTFVADAVVVAVPLG 56 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v-~v~~~~g~~~~ad~VI~a~p~~ 56 (268)
+++|+++++|++|+.+ +++ .+.+ ++.++.+|.||+++...
T Consensus 241 Gv~i~~~~~v~~i~~~-~~v~~v~~-~~~~i~~D~vi~a~G~~ 281 (480)
T 3cgb_A 241 HIEILTNENVKAFKGN-ERVEAVET-DKGTYKADLVLVSVGVK 281 (480)
T ss_dssp TCEEECSCCEEEEEES-SBEEEEEE-TTEEEECSEEEECSCEE
T ss_pred CcEEEcCCEEEEEEcC-CcEEEEEE-CCCEEEcCEEEECcCCC
Confidence 6789999999999875 444 3555 45589999999998653
No 188
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=80.06 E-value=3.8 Score=36.73 Aligned_cols=42 Identities=24% Similarity=0.132 Sum_probs=31.8
Q ss_pred CCceeeCcceeEEEEc-CCceE-EEE---cCCc--EEEeCEEEEecChh
Q 024393 15 GLDIRLGHRVTKITRH-YIGVK-VTV---EGGK--TFVADAVVVAVPLG 56 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~-~~~v~-v~~---~~g~--~~~ad~VI~a~p~~ 56 (268)
+++|+++++|++|..+ ++++. |.. .+|+ ++.||.||+|+-..
T Consensus 157 gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~ 205 (588)
T 2wdq_A 157 HTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGA 205 (588)
T ss_dssp TCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCC
T ss_pred CCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCC
Confidence 5789999999999986 55543 432 4564 68899999999654
No 189
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=79.78 E-value=2.3 Score=31.15 Aligned_cols=42 Identities=17% Similarity=0.052 Sum_probs=32.9
Q ss_pred hcCCCCCeeeeecccCCCCCccchhhHHHHHHHHHHHHHHHHH
Q 024393 199 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLE 241 (268)
Q Consensus 199 ~~~p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i~~~l~~ 241 (268)
+++..+++|.+||...... .....|...|..||..|...+..
T Consensus 131 ~~t~~~~i~a~GD~~~~~~-~~~~~A~~~g~~aa~~i~~~~~~ 172 (180)
T 2ywl_A 131 GRTSYPRVYAAGVARGKVP-GHAIISAGDGAYVAVHLVSDLRG 172 (180)
T ss_dssp CBCSSTTEEECGGGGTCCS-CCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCcCCCCEEEeecccCcch-hhHHHHHHhHHHHHHHHHHHhhh
Confidence 3456789999999987632 26678999999999999877654
No 190
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=79.65 E-value=1.5 Score=38.49 Aligned_cols=43 Identities=16% Similarity=0.261 Sum_probs=33.5
Q ss_pred CCceeeCcceeEEEEc---CCceEEEE--c-CC--cEEEeCEEEEecChhh
Q 024393 15 GLDIRLGHRVTKITRH---YIGVKVTV--E-GG--KTFVADAVVVAVPLGV 57 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~---~~~v~v~~--~-~g--~~~~ad~VI~a~p~~~ 57 (268)
+++|+++++|++|+.+ ++.+.|++ . +| +++.||.||.|+-...
T Consensus 180 gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S 230 (497)
T 2bry_A 180 GVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKF 230 (497)
T ss_dssp TCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTC
T ss_pred CCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCc
Confidence 5789999999999974 24566766 3 55 5789999999997654
No 191
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=79.57 E-value=3.9 Score=35.60 Aligned_cols=47 Identities=26% Similarity=0.229 Sum_probs=33.4
Q ss_pred HHHHhc-CCceeeCcceeEEEEcC-CceEEEEcC---Cc--EEEeCEEEEecCh
Q 024393 9 INTLAK-GLDIRLGHRVTKITRHY-IGVKVTVEG---GK--TFVADAVVVAVPL 55 (268)
Q Consensus 9 ~~~l~~-~l~i~~~~~V~~I~~~~-~~v~v~~~~---g~--~~~ad~VI~a~p~ 55 (268)
.+.|.+ +++|++++.|.+|+..+ +.+.+.+.+ |+ ++.+|.||+++..
T Consensus 232 ~~~l~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~ 285 (488)
T 3dgz_A 232 TEHMESHGTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGR 285 (488)
T ss_dssp HHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECSCE
T ss_pred HHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccC
Confidence 334433 67899999999998754 445565543 54 4789999999864
No 192
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=78.99 E-value=4.1 Score=36.82 Aligned_cols=51 Identities=18% Similarity=0.082 Sum_probs=36.3
Q ss_pred HHHHHHhc-----CCceeeCcceeEEEEcCCceE-EEE---cCCc--EEEeCEEEEecChhh
Q 024393 7 PVINTLAK-----GLDIRLGHRVTKITRHYIGVK-VTV---EGGK--TFVADAVVVAVPLGV 57 (268)
Q Consensus 7 ~l~~~l~~-----~l~i~~~~~V~~I~~~~~~v~-v~~---~~g~--~~~ad~VI~a~p~~~ 57 (268)
.|.+.|.+ +++|+.++.|.+|..+++++. |.. .+|+ ++.|+.||+|+-...
T Consensus 156 ~l~~~L~~~~~~~gv~i~~~~~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 217 (621)
T 2h88_A 156 SLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGYG 217 (621)
T ss_dssp HHHHHHHHHHTTSCCEEEETEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHHHHHHHhCCCEEEEceEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCccc
Confidence 45555533 468999999999998777643 333 4564 688999999996543
No 193
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=78.52 E-value=4 Score=36.42 Aligned_cols=43 Identities=12% Similarity=-0.024 Sum_probs=33.4
Q ss_pred CCceeeCcceeEEEEcCCce-EEEEc---CCc--EEEeCEEEEecChhh
Q 024393 15 GLDIRLGHRVTKITRHYIGV-KVTVE---GGK--TFVADAVVVAVPLGV 57 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v-~v~~~---~g~--~~~ad~VI~a~p~~~ 57 (268)
+++|+.+++|++|..+++++ .|+.. +|+ ++.||.||.|+-+..
T Consensus 202 Ga~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws 250 (571)
T 2rgh_A 202 GAYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWV 250 (571)
T ss_dssp TCEEESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCGGGH
T ss_pred CCeEEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCChhH
Confidence 57899999999999988764 35532 343 689999999997653
No 194
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=78.30 E-value=4.8 Score=36.70 Aligned_cols=42 Identities=17% Similarity=0.164 Sum_probs=32.0
Q ss_pred CCceeeCcceeEEEEcCCceE-EEE---cCCc--EEEeCEEEEecChh
Q 024393 15 GLDIRLGHRVTKITRHYIGVK-VTV---EGGK--TFVADAVVVAVPLG 56 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~-v~~---~~g~--~~~ad~VI~a~p~~ 56 (268)
+++|+.++.|.+|..+++++. |.. .+|+ .+.||.||+|+-..
T Consensus 172 gv~i~~~~~v~~L~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~ 219 (660)
T 2bs2_A 172 GVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGY 219 (660)
T ss_dssp TCEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECCCCC
T ss_pred CCEEEECcEEEEEEecCCEEEEEEEEECCCCcEEEEEcCEEEEccCcc
Confidence 578999999999998777533 332 4565 48899999999654
No 195
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=77.23 E-value=3.9 Score=35.87 Aligned_cols=47 Identities=19% Similarity=0.176 Sum_probs=34.0
Q ss_pred HHhcC-CceeeCcceeEEEEcC-C-c-eEEEEc--CC-----cEEEeCEEEEecChhh
Q 024393 11 TLAKG-LDIRLGHRVTKITRHY-I-G-VKVTVE--GG-----KTFVADAVVVAVPLGV 57 (268)
Q Consensus 11 ~l~~~-l~i~~~~~V~~I~~~~-~-~-v~v~~~--~g-----~~~~ad~VI~a~p~~~ 57 (268)
+..++ ++|++++.|++|..++ + + +.|.+. +| .++.|+.||+|+..-.
T Consensus 231 a~~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~~~g~~~~~~~v~A~~VIlaaG~~~ 288 (504)
T 1n4w_A 231 ALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGSLG 288 (504)
T ss_dssp HHHTTSEEEEESEEEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEEEEEEECSHHHH
T ss_pred HHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCccceeEEEeeCEEEEccCCCC
Confidence 33444 7999999999999885 3 3 335553 56 3678999999987653
No 196
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=77.16 E-value=3 Score=36.30 Aligned_cols=41 Identities=24% Similarity=0.349 Sum_probs=34.0
Q ss_pred CCceeeCcceeEEEEcCCceEEEE-cCCc--EEEeCEEEEecCh
Q 024393 15 GLDIRLGHRVTKITRHYIGVKVTV-EGGK--TFVADAVVVAVPL 55 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~v~~-~~g~--~~~ad~VI~a~p~ 55 (268)
++++++++.|.+|+.+++.+.+.. .+|+ ++.+|++|+|+-.
T Consensus 107 gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG~ 150 (480)
T 3cgb_A 107 GIDAKVRHEVTKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATGV 150 (480)
T ss_dssp CCEEESSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred CCEEEeCCEEEEEECCCCEEEEEEcCCCceEEEEcCEEEECCCC
Confidence 578999999999998877787776 4565 7899999999864
No 197
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=76.93 E-value=4.2 Score=36.81 Aligned_cols=50 Identities=22% Similarity=0.165 Sum_probs=36.3
Q ss_pred HHHHHhc-CC--ceeeCcceeEEEEcCC----ceEEEEc------CC--cEEEeCEEEEecChhh
Q 024393 8 VINTLAK-GL--DIRLGHRVTKITRHYI----GVKVTVE------GG--KTFVADAVVVAVPLGV 57 (268)
Q Consensus 8 l~~~l~~-~l--~i~~~~~V~~I~~~~~----~v~v~~~------~g--~~~~ad~VI~a~p~~~ 57 (268)
|.+.+.+ ++ +|+++++|++|+.+++ +|.|++. +| ++++||+||.|.-.+.
T Consensus 147 L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S 211 (639)
T 2dkh_A 147 YLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHAGQIETVQARYVVGCDGARS 211 (639)
T ss_dssp HHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGTTCEEEEEEEEEEECCCTTC
T ss_pred HHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCCCCeEEEEeCEEEECCCcch
Confidence 3444443 33 8999999999998763 4776654 46 5789999999987654
No 198
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=76.71 E-value=2.1 Score=36.90 Aligned_cols=42 Identities=24% Similarity=0.426 Sum_probs=30.3
Q ss_pred cCCCCCeeeeecccCC-CCCc--cchhhHHHHHHHHHHHHHHHHH
Q 024393 200 RIPVDNLFFAGEATSM-SYPG--SVHGAFSTGLMAAEDCRMRVLE 241 (268)
Q Consensus 200 ~~p~~~l~~aG~~~~~-~~~g--~~~gA~~Sg~~aa~~i~~~l~~ 241 (268)
.+++++||+||+-+.. ++.| .+..|..+|+.|++.+.+..++
T Consensus 401 ~~~i~GLy~aGEv~~v~g~~GG~~l~~a~~~G~~Ag~~aa~~~~~ 445 (447)
T 2i0z_A 401 SKFTNGLYFCGEVLDIHGYTGGYNITSALVTGRIAGTTAGENAKM 445 (447)
T ss_dssp ESSSBTEEECGGGBSCBCCTTTHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred cCcCCCEEEEEeeccCccCCCcHHHHHHHHHHHHHHHHHHHhhhh
Confidence 3578999999988653 1222 4567999999999998765543
No 199
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=76.37 E-value=2.4 Score=37.26 Aligned_cols=41 Identities=20% Similarity=0.250 Sum_probs=28.9
Q ss_pred CCceeeCcceeEEEEcCCceEEEEcCC----cEEEeCEEEEecCh
Q 024393 15 GLDIRLGHRVTKITRHYIGVKVTVEGG----KTFVADAVVVAVPL 55 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~v~~~~g----~~~~ad~VI~a~p~ 55 (268)
+++|++|++|++|+.++....+...+| +++.||.||+|+..
T Consensus 286 GV~v~~~~~v~~v~~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv 330 (502)
T 4g6h_A 286 SIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGN 330 (502)
T ss_dssp TCEEETTEEEEEECSSEEEEEEECTTSCEEEEEEECSEEEECCCE
T ss_pred ceeeecCceEEEEeCCceEEEEEecCcccceeeeccCEEEEccCC
Confidence 678999999999864322233444555 46899999998753
No 200
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=75.52 E-value=5.2 Score=34.16 Aligned_cols=39 Identities=15% Similarity=0.017 Sum_probs=30.8
Q ss_pred CCceeeCcceeEEEEcCCceEEEEcCC--cEEEeCEEEEecCh
Q 024393 15 GLDIRLGHRVTKITRHYIGVKVTVEGG--KTFVADAVVVAVPL 55 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~v~~~~g--~~~~ad~VI~a~p~ 55 (268)
++++++++.|++|+ .+++.+...+| +++.+|.||++++.
T Consensus 214 GV~~~~~~~v~~v~--~~~~~~~~~~g~~~~i~~d~vi~~~G~ 254 (430)
T 3hyw_A 214 NIDWIANVAVKAIE--PDKVIYEDLNGNTHEVPAKFTMFMPSF 254 (430)
T ss_dssp TCEEECSCEEEEEC--SSEEEEECTTSCEEEEECSEEEEECEE
T ss_pred CeEEEeCceEEEEe--CCceEEEeeCCCceEeecceEEEeccC
Confidence 68999999999985 45666666554 57899999998864
No 201
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=75.46 E-value=3.7 Score=34.79 Aligned_cols=40 Identities=28% Similarity=0.425 Sum_probs=32.7
Q ss_pred CCceeeCcceeEEEEcCCceEEEEcCCcEEEeCEEEEecChh
Q 024393 15 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 56 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~ 56 (268)
+++++++++|++|+.++. .|.+.+|+++.+|++|+|+-..
T Consensus 71 ~i~~~~~~~v~~id~~~~--~v~~~~g~~~~~d~lvlAtG~~ 110 (410)
T 3ef6_A 71 RIDMLTGPEVTALDVQTR--TISLDDGTTLSADAIVIATGSR 110 (410)
T ss_dssp TCEEEESCCEEEEETTTT--EEEETTSCEEECSEEEECCCEE
T ss_pred CCEEEeCCEEEEEECCCC--EEEECCCCEEECCEEEEccCCc
Confidence 568999999999987655 4556788899999999998643
No 202
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=75.45 E-value=2.8 Score=35.79 Aligned_cols=46 Identities=15% Similarity=0.027 Sum_probs=31.7
Q ss_pred HHHHHhc-CCceeeCcceeEEEEcCCceEEEEc--CCcEEEeCEEEEecCh
Q 024393 8 VINTLAK-GLDIRLGHRVTKITRHYIGVKVTVE--GGKTFVADAVVVAVPL 55 (268)
Q Consensus 8 l~~~l~~-~l~i~~~~~V~~I~~~~~~v~v~~~--~g~~~~ad~VI~a~p~ 55 (268)
+.+.|.+ +++++++++|++|+. +++.+... +++++.+|.||++++.
T Consensus 206 l~~~l~~~GV~i~~~~~v~~v~~--~~v~~~~~~~~g~~i~~D~vv~a~G~ 254 (430)
T 3h28_A 206 VEDLFAERNIDWIANVAVKAIEP--DKVIYEDLNGNTHEVPAKFTMFMPSF 254 (430)
T ss_dssp HHHHHHHTTCEEECSCEEEEECS--SEEEEECTTSCEEEEECSEEEEECEE
T ss_pred HHHHHHHCCCEEEeCCEEEEEeC--CeEEEEecCCCceEEeeeEEEECCCC
Confidence 3344433 679999999999864 34444432 2678999999998653
No 203
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=75.09 E-value=4.6 Score=34.62 Aligned_cols=45 Identities=24% Similarity=0.419 Sum_probs=34.2
Q ss_pred HHHHHHhc-CCceeeCcceeEEEEcCCceEEEEcCCcEEEeCEEEEecCh
Q 024393 7 PVINTLAK-GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 55 (268)
Q Consensus 7 ~l~~~l~~-~l~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~ 55 (268)
.+.+.|.+ ++++++++.|++++. + .+.+.+|+++.+|.||+++..
T Consensus 193 ~~~~~l~~~gV~i~~~~~v~~~~~--~--~v~~~~g~~~~~D~vl~a~G~ 238 (437)
T 4eqs_A 193 PILDELDKREIPYRLNEEINAING--N--EITFKSGKVEHYDMIIEGVGT 238 (437)
T ss_dssp HHHHHHHHTTCCEEESCCEEEEET--T--EEEETTSCEEECSEEEECCCE
T ss_pred HHHHHhhccceEEEeccEEEEecC--C--eeeecCCeEEeeeeEEEEece
Confidence 34455543 679999999998863 2 466788999999999999864
No 204
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=75.09 E-value=3.1 Score=35.64 Aligned_cols=39 Identities=26% Similarity=0.345 Sum_probs=32.1
Q ss_pred CCceeeCcceeEEEEcCCceEEEEcCCcEEEeCEEEEecCh
Q 024393 15 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 55 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~ 55 (268)
++++++++.|.+|+.+++ .|.+.+|+++.+|++|+|+-.
T Consensus 74 gv~~~~~~~v~~i~~~~~--~v~~~~g~~~~~d~lviAtG~ 112 (431)
T 1q1r_A 74 NIQLLGGTQVTAINRDRQ--QVILSDGRALDYDRLVLATGG 112 (431)
T ss_dssp TEEEECSCCEEEEETTTT--EEEETTSCEEECSEEEECCCE
T ss_pred CCEEEeCCEEEEEECCCC--EEEECCCCEEECCEEEEcCCC
Confidence 568999999999987655 455567888999999999865
No 205
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=75.06 E-value=4.5 Score=35.46 Aligned_cols=47 Identities=32% Similarity=0.231 Sum_probs=33.8
Q ss_pred HHhcC-CceeeCcceeEEEEcC-C-ce-EEEEc--CC-----cEEEeCEEEEecChhh
Q 024393 11 TLAKG-LDIRLGHRVTKITRHY-I-GV-KVTVE--GG-----KTFVADAVVVAVPLGV 57 (268)
Q Consensus 11 ~l~~~-l~i~~~~~V~~I~~~~-~-~v-~v~~~--~g-----~~~~ad~VI~a~p~~~ 57 (268)
+..++ ++|++++.|++|..++ + ++ .|.+. +| .++.|+.||+++..-.
T Consensus 236 a~~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~~~g~~~~~~~~~A~~VIlaaGa~~ 293 (507)
T 1coy_A 236 AAATGKLTITTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSVG 293 (507)
T ss_dssp HHHTTCEEEECSEEEEEEEECSSSSEEEEEEEECTTSCEEEEEEEEEEEEEECSHHHH
T ss_pred HHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCcccccEEEEeCEEEEccCccC
Confidence 33443 7899999999999886 4 33 35553 45 3678999999987653
No 206
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=74.54 E-value=4 Score=35.93 Aligned_cols=42 Identities=12% Similarity=0.160 Sum_probs=34.7
Q ss_pred CCceeeCcceeEEEEcC---CceEEEEcCCcEEEeCEEEEecChh
Q 024393 15 GLDIRLGHRVTKITRHY---IGVKVTVEGGKTFVADAVVVAVPLG 56 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~---~~v~v~~~~g~~~~ad~VI~a~p~~ 56 (268)
+++++++++|.+|..+. +.+.|.+.+|+++.+|+||+|+-..
T Consensus 281 gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~ 325 (521)
T 1hyu_A 281 DVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAK 325 (521)
T ss_dssp CEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEE
T ss_pred CCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCC
Confidence 46799999999998642 3578888888899999999999753
No 207
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=73.46 E-value=4.5 Score=34.27 Aligned_cols=39 Identities=18% Similarity=0.245 Sum_probs=31.4
Q ss_pred CCceeeCcceeEEEEcCCceEEEEcCCcEEEeCEEEEecCh
Q 024393 15 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 55 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~ 55 (268)
+++++++++|++|+.++. .|.+.+|+++.+|++|+|+-.
T Consensus 73 ~v~~~~~~~v~~i~~~~~--~v~~~~g~~~~~d~lviAtG~ 111 (408)
T 2gqw_A 73 EVEWLLGVTAQSFDPQAH--TVALSDGRTLPYGTLVLATGA 111 (408)
T ss_dssp SCEEEETCCEEEEETTTT--EEEETTSCEEECSEEEECCCE
T ss_pred CCEEEcCCEEEEEECCCC--EEEECCCCEEECCEEEECCCC
Confidence 467999999999987654 455667889999999999865
No 208
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=73.38 E-value=2.7 Score=36.72 Aligned_cols=39 Identities=15% Similarity=0.278 Sum_probs=31.6
Q ss_pred CCceeeCcceeEEEEcCCceEEEEcCCcEEEeCEEEEecCh
Q 024393 15 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 55 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~ 55 (268)
++++++++.|.+|+.+++ .|.+.+|+++.+|++|+|+-.
T Consensus 104 gv~~~~g~~v~~id~~~~--~V~~~~g~~i~yd~lviATGs 142 (493)
T 1m6i_A 104 GVAVLTGKKVVQLDVRDN--MVKLNDGSQITYEKCLIATGG 142 (493)
T ss_dssp EEEEEETCCEEEEEGGGT--EEEETTSCEEEEEEEEECCCE
T ss_pred CeEEEcCCEEEEEECCCC--EEEECCCCEEECCEEEECCCC
Confidence 457899999999987655 455678889999999999864
No 209
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=72.64 E-value=6 Score=35.57 Aligned_cols=41 Identities=24% Similarity=0.095 Sum_probs=31.8
Q ss_pred CceeeCcceeEEEEcCCceE-E--EE-cCCc--EEEeCEEEEecChh
Q 024393 16 LDIRLGHRVTKITRHYIGVK-V--TV-EGGK--TFVADAVVVAVPLG 56 (268)
Q Consensus 16 l~i~~~~~V~~I~~~~~~v~-v--~~-~~g~--~~~ad~VI~a~p~~ 56 (268)
++|++++.|.+|..+++++. | .. .+|+ ++.||.||+|+-..
T Consensus 150 v~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~ 196 (602)
T 1kf6_A 150 IQRFDEHFVLDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGA 196 (602)
T ss_dssp EEEEETEEEEEEEEETTEEEEEEEEETTTTEEEEEECSCEEECCCCC
T ss_pred cEEEeCCEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCC
Confidence 68999999999998877533 3 22 5675 68899999999654
No 210
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=72.04 E-value=3.7 Score=36.39 Aligned_cols=41 Identities=22% Similarity=0.234 Sum_probs=33.3
Q ss_pred CCceeeCcceeEEEEcCCceEEEE-cCC--cEEEeCEEEEecCh
Q 024393 15 GLDIRLGHRVTKITRHYIGVKVTV-EGG--KTFVADAVVVAVPL 55 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~v~~-~~g--~~~~ad~VI~a~p~ 55 (268)
+++++++++|++|+.+++.+.+.. .+| .++.+|+||+|+-.
T Consensus 72 ~i~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~ 115 (565)
T 3ntd_A 72 NVEVRVKHEVVAIDRAAKLVTVRRLLDGSEYQESYDTLLLSPGA 115 (565)
T ss_dssp CCEEETTEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred CcEEEECCEEEEEECCCCEEEEEecCCCCeEEEECCEEEECCCC
Confidence 567899999999998888887765 234 37899999999865
No 211
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=71.89 E-value=4.6 Score=35.81 Aligned_cols=42 Identities=21% Similarity=0.068 Sum_probs=31.4
Q ss_pred CCceeeCcceeEEEE-cCC------ceE-EEEc---CCc--EEEeCEEEEecChh
Q 024393 15 GLDIRLGHRVTKITR-HYI------GVK-VTVE---GGK--TFVADAVVVAVPLG 56 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~-~~~------~v~-v~~~---~g~--~~~ad~VI~a~p~~ 56 (268)
+++|++++.|.+|.. +++ ++. |... +|+ ++.||.||+|+-..
T Consensus 153 gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~ 207 (540)
T 1chu_A 153 NIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGA 207 (540)
T ss_dssp TEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCC
T ss_pred CCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCc
Confidence 578999999999998 444 543 4443 565 68899999999654
No 212
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=71.82 E-value=2.7 Score=36.68 Aligned_cols=41 Identities=17% Similarity=0.128 Sum_probs=32.2
Q ss_pred CCceeeCcceeEEEEcCCceEEEE-cCCcEEEeCEEEEecCh
Q 024393 15 GLDIRLGHRVTKITRHYIGVKVTV-EGGKTFVADAVVVAVPL 55 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~v~~-~~g~~~~ad~VI~a~p~ 55 (268)
+++++++++|..|+.+++.+.+.. .+++++.+|++|+|+-.
T Consensus 106 gv~v~~~~~v~~i~~~~~~v~v~~~g~~~~~~~d~lviAtG~ 147 (490)
T 2bc0_A 106 GAKVYMESPVQSIDYDAKTVTALVDGKNHVETYDKLIFATGS 147 (490)
T ss_dssp TCEEETTCCEEEEETTTTEEEEEETTEEEEEECSEEEECCCE
T ss_pred CCEEEeCCEEEEEECCCCEEEEEeCCcEEEEECCEEEECCCC
Confidence 567899999999998777777652 22357899999999864
No 213
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=71.26 E-value=4.6 Score=34.51 Aligned_cols=38 Identities=21% Similarity=0.208 Sum_probs=28.9
Q ss_pred CceeeCcceeEEEEcCCceEEEEcCCcEEEeCEEEEecChh
Q 024393 16 LDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 56 (268)
Q Consensus 16 l~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~ 56 (268)
++++.+ +|++|+.+++. |++.+|+++.+|++|+|+-..
T Consensus 71 v~~i~~-~v~~Id~~~~~--V~~~~g~~i~YD~LViAtG~~ 108 (430)
T 3hyw_A 71 IEFINE-KAESIDPDANT--VTTQSGKKIEYDYLVIATGPK 108 (430)
T ss_dssp EEEECS-CEEEEETTTTE--EEETTCCEEECSEEEECCCCE
T ss_pred cEEEEe-EEEEEECCCCE--EEECCCCEEECCEEEEeCCCC
Confidence 345544 78888877664 566788999999999999764
No 214
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=71.04 E-value=3.6 Score=34.34 Aligned_cols=38 Identities=26% Similarity=0.281 Sum_probs=30.0
Q ss_pred CCceeeCcceeEEEEcCCceEEEEcCCcEEEeCEEEEecCh
Q 024393 15 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 55 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~ 55 (268)
+++++++++|+.|+.++.. |. .+|+++.+|++|+|+-.
T Consensus 74 ~v~~~~g~~v~~id~~~~~--V~-~~g~~~~~d~lViATGs 111 (367)
T 1xhc_A 74 GIEIRLAEEAKLIDRGRKV--VI-TEKGEVPYDTLVLATGA 111 (367)
T ss_dssp TEEEECSCCEEEEETTTTE--EE-ESSCEEECSEEEECCCE
T ss_pred CcEEEECCEEEEEECCCCE--EE-ECCcEEECCEEEECCCC
Confidence 5678999999999876543 44 56788999999999864
No 215
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=70.27 E-value=2.9 Score=38.31 Aligned_cols=47 Identities=23% Similarity=0.270 Sum_probs=33.2
Q ss_pred HHHHHHhc-CCceeeCcceeEEEEcCCceEEEE---cCCcEEEeCEEEEecCh
Q 024393 7 PVINTLAK-GLDIRLGHRVTKITRHYIGVKVTV---EGGKTFVADAVVVAVPL 55 (268)
Q Consensus 7 ~l~~~l~~-~l~i~~~~~V~~I~~~~~~v~v~~---~~g~~~~ad~VI~a~p~ 55 (268)
.+.+.|.+ +++|+++++|++|+.+ ++.+.. .+++++.+|.||+++..
T Consensus 572 ~l~~~l~~~GV~i~~~~~V~~i~~~--~~~v~~~~~~~~~~i~aD~VV~A~G~ 622 (690)
T 3k30_A 572 RIQRRLIENGVARVTDHAVVAVGAG--GVTVRDTYASIERELECDAVVMVTAR 622 (690)
T ss_dssp HHHHHHHHTTCEEEESEEEEEEETT--EEEEEETTTCCEEEEECSEEEEESCE
T ss_pred HHHHHHHHCCCEEEcCcEEEEEECC--eEEEEEccCCeEEEEECCEEEECCCC
Confidence 34455533 6899999999999843 344442 24567899999999875
No 216
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=70.16 E-value=5.4 Score=34.44 Aligned_cols=41 Identities=22% Similarity=0.276 Sum_probs=32.7
Q ss_pred CCceeeCcceeEEEEcCCceEEEE-cCCc--EEEeCEEEEecCh
Q 024393 15 GLDIRLGHRVTKITRHYIGVKVTV-EGGK--TFVADAVVVAVPL 55 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~v~~-~~g~--~~~ad~VI~a~p~ 55 (268)
+++++++++|++|+.+++.+.+.. .+|+ ++.+|++|+|+-.
T Consensus 80 gi~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~ 123 (472)
T 3iwa_A 80 DVEALVETRAHAIDRAAHTVEIENLRTGERRTLKYDKLVLALGS 123 (472)
T ss_dssp -CEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred CcEEEECCEEEEEECCCCEEEEeecCCCCEEEEECCEEEEeCCC
Confidence 457889999999998888887765 3354 7899999999864
No 217
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=70.06 E-value=5.9 Score=33.94 Aligned_cols=41 Identities=17% Similarity=0.187 Sum_probs=32.8
Q ss_pred CCceeeCcceeEEEEcCCceEEEE-cCCc--EEEeCEEEEecCh
Q 024393 15 GLDIRLGHRVTKITRHYIGVKVTV-EGGK--TFVADAVVVAVPL 55 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~v~~-~~g~--~~~ad~VI~a~p~ 55 (268)
++++++++.|.+|..+++.+.+.. .+|+ ++.+|++|+|+-.
T Consensus 70 gv~~~~~~~v~~i~~~~~~v~~~~~~~g~~~~~~~d~lviAtG~ 113 (447)
T 1nhp_A 70 GVNVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPGA 113 (447)
T ss_dssp TCEEEETEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred CCEEEECCEEEEEeCCCCEEEEEecCCCceEEEeCCEEEEcCCC
Confidence 567889999999988877777765 3464 4889999999864
No 218
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=69.41 E-value=11 Score=34.26 Aligned_cols=50 Identities=18% Similarity=0.117 Sum_probs=35.5
Q ss_pred HHHHHHhc--CC-ceeeCcceeEEEEcCC---ceE-EEE---cCCc--EEEeCEEEEecChh
Q 024393 7 PVINTLAK--GL-DIRLGHRVTKITRHYI---GVK-VTV---EGGK--TFVADAVVVAVPLG 56 (268)
Q Consensus 7 ~l~~~l~~--~l-~i~~~~~V~~I~~~~~---~v~-v~~---~~g~--~~~ad~VI~a~p~~ 56 (268)
.|.+++.+ ++ +|+.++.|.+|..+++ ++. |.. .+|+ ++.|+.||+|+-..
T Consensus 156 ~l~~~~~~~~gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~ 217 (643)
T 1jnr_A 156 IIAEAAKMAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGA 217 (643)
T ss_dssp HHHHHHHHHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCB
T ss_pred HHHHHHHhcCCCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCcc
Confidence 33444433 78 8999999999998776 644 332 4564 68899999998654
No 219
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=69.36 E-value=9.2 Score=33.41 Aligned_cols=38 Identities=16% Similarity=0.106 Sum_probs=29.7
Q ss_pred ceeeCcceeEEEEcCC--------ceEEEEcCC-----cEEEeCEEEEecC
Q 024393 17 DIRLGHRVTKITRHYI--------GVKVTVEGG-----KTFVADAVVVAVP 54 (268)
Q Consensus 17 ~i~~~~~V~~I~~~~~--------~v~v~~~~g-----~~~~ad~VI~a~p 54 (268)
.|+++++|++|+..+. .|.|++.++ +++.|+.||+++.
T Consensus 161 ~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG 211 (501)
T 4b63_A 161 VVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIG 211 (501)
T ss_dssp GEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCC
T ss_pred ceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcC
Confidence 4999999999986542 377777543 4688999999997
No 220
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=68.90 E-value=5.9 Score=35.32 Aligned_cols=41 Identities=20% Similarity=0.252 Sum_probs=33.7
Q ss_pred CCceeeCcceeEEEEcCCceEEEE-cCCc--EEEeCEEEEecCh
Q 024393 15 GLDIRLGHRVTKITRHYIGVKVTV-EGGK--TFVADAVVVAVPL 55 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~v~~-~~g~--~~~ad~VI~a~p~ 55 (268)
++++++++.|++|+.+++.+.+.. .+|+ ++.+|++|+|+-.
T Consensus 107 gi~v~~~~~V~~id~~~~~v~v~~~~~g~~~~~~~d~lviAtG~ 150 (588)
T 3ics_A 107 NLDIRVLSEVVKINKEEKTITIKNVTTNETYNEAYDVLILSPGA 150 (588)
T ss_dssp TCEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred CcEEEECCEEEEEECCCCEEEEeecCCCCEEEEeCCEEEECCCC
Confidence 567899999999998888888765 3555 7889999999864
No 221
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=68.86 E-value=9.6 Score=30.51 Aligned_cols=38 Identities=16% Similarity=0.244 Sum_probs=29.3
Q ss_pred eeeCcceeEEEEcCC-ceEEEEcCCcEEEeCEEEEecCh
Q 024393 18 IRLGHRVTKITRHYI-GVKVTVEGGKTFVADAVVVAVPL 55 (268)
Q Consensus 18 i~~~~~V~~I~~~~~-~v~v~~~~g~~~~ad~VI~a~p~ 55 (268)
.+++..|..+...+. .+.+.+.+|+++.+|+||+|+-.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~v~~~~g~~~~a~~liiATGs 115 (304)
T 4fk1_A 77 HYYEKTVVMITKQSTGLFEIVTKDHTKYLAERVLLATGM 115 (304)
T ss_dssp EEEECCEEEEEECTTSCEEEEETTCCEEEEEEEEECCCC
T ss_pred EEEeeEEEEeeecCCCcEEEEECCCCEEEeCEEEEccCC
Confidence 455566667766554 57788889999999999999975
No 222
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=67.77 E-value=5 Score=33.48 Aligned_cols=36 Identities=14% Similarity=0.198 Sum_probs=29.0
Q ss_pred CCceeeCcceeEEEEcCCceEEEEcCCcEEEeCEEEEecCh
Q 024393 15 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 55 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~ 55 (268)
+++|+++++|++|+ .+ .+.+.+|+ +.+|.||+++..
T Consensus 197 gV~i~~~~~v~~i~--~~--~v~~~~g~-i~~D~vi~a~G~ 232 (367)
T 1xhc_A 197 GVKFFLNSELLEAN--EE--GVLTNSGF-IEGKVKICAIGI 232 (367)
T ss_dssp TEEEECSCCEEEEC--SS--EEEETTEE-EECSCEEEECCE
T ss_pred CCEEEcCCEEEEEE--ee--EEEECCCE-EEcCEEEECcCC
Confidence 57899999999997 22 35566777 999999999864
No 223
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=67.68 E-value=8.8 Score=33.87 Aligned_cols=49 Identities=12% Similarity=0.141 Sum_probs=35.0
Q ss_pred HHHHHhc--CCceeeCcceeEEEEcCCceE-EEEcC---Cc--EE---EeCEEEEecChh
Q 024393 8 VINTLAK--GLDIRLGHRVTKITRHYIGVK-VTVEG---GK--TF---VADAVVVAVPLG 56 (268)
Q Consensus 8 l~~~l~~--~l~i~~~~~V~~I~~~~~~v~-v~~~~---g~--~~---~ad~VI~a~p~~ 56 (268)
+.+.+.+ .++|++++.|++|..+++++. |.+.+ |+ ++ .+|.||+++-.-
T Consensus 201 ~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~ 260 (546)
T 1kdg_A 201 YLQTALARPNFTFKTNVMVSNVVRNGSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAF 260 (546)
T ss_dssp HHHHHHTCTTEEEECSCCEEEEEEETTEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHH
T ss_pred HHHHHhhCCCcEEEeCCEEEEEEEeCCEEEEEEEEecCCCceeEEEEEeCCEEEEcCChh
Confidence 4444443 578999999999998877644 66644 63 33 789999998653
No 224
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=65.94 E-value=3.7 Score=35.32 Aligned_cols=41 Identities=15% Similarity=0.146 Sum_probs=32.6
Q ss_pred CCceeeCcceeEEEEcCCceEEEE-cCCcEEEeCEEEEecCh
Q 024393 15 GLDIRLGHRVTKITRHYIGVKVTV-EGGKTFVADAVVVAVPL 55 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~v~~-~~g~~~~ad~VI~a~p~ 55 (268)
+++++++++|.+|+.+++.+.+.. .+++++.+|++|+|+-.
T Consensus 72 gi~~~~~~~V~~id~~~~~v~v~~~~~~~~~~~d~lviAtG~ 113 (452)
T 3oc4_A 72 KIQLLLNREVVAMDVENQLIAWTRKEEQQWYSYDKLILATGA 113 (452)
T ss_dssp TEEEECSCEEEEEETTTTEEEEEETTEEEEEECSEEEECCCC
T ss_pred CCEEEECCEEEEEECCCCEEEEEecCceEEEEcCEEEECCCc
Confidence 446889999999998888777752 24567899999999865
No 225
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=65.91 E-value=6.2 Score=33.27 Aligned_cols=38 Identities=34% Similarity=0.393 Sum_probs=31.4
Q ss_pred CCCCeeeeecccCCCCCccchhhHHHHHHHHHHHHHHH
Q 024393 202 PVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRV 239 (268)
Q Consensus 202 p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i~~~l 239 (268)
..+|||.+||......+.....|...|..+|+.|...+
T Consensus 298 ~~~~vfa~GD~~~~~~~~~~~~A~~q~~~aa~~i~~~l 335 (409)
T 3h8l_A 298 KYDNVYAVGDANSMTVPKLGYLAVMTGRIAAQHLANRL 335 (409)
T ss_dssp SCTTEEECGGGBTTCCSCCHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEeehhccCCCCcHHHHHHHHHHHHHHHHHHHh
Confidence 46899999999874334567889999999999998877
No 226
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=65.70 E-value=7.5 Score=32.58 Aligned_cols=43 Identities=19% Similarity=0.098 Sum_probs=33.7
Q ss_pred CCCCCeeeeecccCC-CCCccchhhHHHHHHHHHHHHHHHHHHh
Q 024393 201 IPVDNLFFAGEATSM-SYPGSVHGAFSTGLMAAEDCRMRVLERY 243 (268)
Q Consensus 201 ~p~~~l~~aG~~~~~-~~~g~~~gA~~Sg~~aa~~i~~~l~~~~ 243 (268)
+..+|+|-+||.+.. +.+-....|...|..+|+.|+..+..+.
T Consensus 284 t~~p~VfAiGDva~~~~~pk~a~~A~~qa~v~A~ni~~~l~G~~ 327 (401)
T 3vrd_B 284 SLQPGIHVIGDACNAAPMPKSAYSANSQAKVAAAAVVALLKGEE 327 (401)
T ss_dssp SSSTTEEECGGGBCCTTSCBSHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred cCCCCEEEecccccCCCCCchHHHHHHHHHHHHHHHHHHhcCCC
Confidence 446899999998753 2344667899999999999999887653
No 227
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=65.10 E-value=6.1 Score=33.66 Aligned_cols=45 Identities=13% Similarity=0.104 Sum_probs=34.3
Q ss_pred HhcC-CCCCeeeeecccCCCC----------CccchhhHHHHHHHHHHHHHHHHHH
Q 024393 198 RLRI-PVDNLFFAGEATSMSY----------PGSVHGAFSTGLMAAEDCRMRVLER 242 (268)
Q Consensus 198 ~~~~-p~~~l~~aG~~~~~~~----------~g~~~gA~~Sg~~aa~~i~~~l~~~ 242 (268)
.+++ ..+|||.+||...... +.....|...|..+|+.|...+..+
T Consensus 280 ~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~~g~~aa~ni~~~l~g~ 335 (430)
T 3h28_A 280 CFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNN 335 (430)
T ss_dssp TSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred cccCCCCCCEEEEEeeeccCCccCCCCCCCCCchHHHHHHHHHHHHHHHHHHhcCC
Confidence 3455 4789999999986421 2356789999999999999887654
No 228
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=64.66 E-value=6.9 Score=33.57 Aligned_cols=41 Identities=22% Similarity=0.289 Sum_probs=32.8
Q ss_pred CCceeeCcceeEEEEcCCceEEEEc-C--CcEEEeCEEEEecCh
Q 024393 15 GLDIRLGHRVTKITRHYIGVKVTVE-G--GKTFVADAVVVAVPL 55 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~v~~~-~--g~~~~ad~VI~a~p~ 55 (268)
++++++++.|..|+.+++.+.+... + ++++.+|++|+|+-.
T Consensus 72 gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtGs 115 (452)
T 2cdu_A 72 GANVQMRHQVTNVDPETKTIKVKDLITNEEKTEAYDKLIMTTGS 115 (452)
T ss_dssp TCEEEESEEEEEEEGGGTEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred CCEEEeCCEEEEEEcCCCEEEEEecCCCceEEEECCEEEEccCC
Confidence 5678999999999987777777652 2 467999999999864
No 229
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=64.52 E-value=9.7 Score=34.65 Aligned_cols=44 Identities=27% Similarity=0.383 Sum_probs=32.8
Q ss_pred HHHh-cCCceeeCcceeEEEEcCCceEEEEcCC--cEEEeCEEEEecChh
Q 024393 10 NTLA-KGLDIRLGHRVTKITRHYIGVKVTVEGG--KTFVADAVVVAVPLG 56 (268)
Q Consensus 10 ~~l~-~~l~i~~~~~V~~I~~~~~~v~v~~~~g--~~~~ad~VI~a~p~~ 56 (268)
+.|. .++++++++.|++|+ ++++.+. .+| +++.+|.||+++...
T Consensus 581 ~~l~~~GV~v~~~~~v~~i~--~~~v~~~-~~G~~~~i~~D~Vi~a~G~~ 627 (671)
T 1ps9_A 581 TTLLSRGVKMIPGVSYQKID--DDGLHVV-INGETQVLAVDNVVICAGQE 627 (671)
T ss_dssp HHHHHTTCEEECSCEEEEEE--TTEEEEE-ETTEEEEECCSEEEECCCEE
T ss_pred HHHHhcCCEEEeCcEEEEEe--CCeEEEe-cCCeEEEEeCCEEEECCCcc
Confidence 4443 368999999999997 3455554 567 578899999998754
No 230
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=63.85 E-value=5.9 Score=32.62 Aligned_cols=38 Identities=26% Similarity=0.329 Sum_probs=30.0
Q ss_pred CCCeeeeecccC-----CCCCccchhhHHHHHHHHHHHHHHHH
Q 024393 203 VDNLFFAGEATS-----MSYPGSVHGAFSTGLMAAEDCRMRVL 240 (268)
Q Consensus 203 ~~~l~~aG~~~~-----~~~~g~~~gA~~Sg~~aa~~i~~~l~ 240 (268)
+++||++|.... +.-+..+-+-+.||.+||+.|++.|.
T Consensus 283 ~~~~~~~g~~~~~~~~~~r~g~~fg~m~~sg~~~a~~~~~~~~ 325 (326)
T 2gjc_A 283 VDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp STTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred cCCEEECChHHHHhcCCCCCChhhhhhhhhhHHHHHHHHHHhh
Confidence 589999998752 22234677889999999999998875
No 231
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=63.84 E-value=9.9 Score=32.93 Aligned_cols=42 Identities=24% Similarity=0.092 Sum_probs=30.7
Q ss_pred CCceeeCcceeEEEEcCCceE-EEEc-CCcEEEeCEEEEecChhh
Q 024393 15 GLDIRLGHRVTKITRHYIGVK-VTVE-GGKTFVADAVVVAVPLGV 57 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~-v~~~-~g~~~~ad~VI~a~p~~~ 57 (268)
+++|+.+++| +|..+++++. +... ++.++.+|.||+|+-...
T Consensus 133 gv~i~~~~~v-~l~~~~~~v~Gv~v~~~~g~~~a~~VVlAtGg~~ 176 (472)
T 2e5v_A 133 GIPIIEDRLV-EIRVKDGKVTGFVTEKRGLVEDVDKLVLATGGYS 176 (472)
T ss_dssp TCCEECCCEE-EEEEETTEEEEEEETTTEEECCCSEEEECCCCCG
T ss_pred CCEEEECcEE-EEEEeCCEEEEEEEEeCCCeEEeeeEEECCCCCc
Confidence 5789999999 9988777653 3332 223577999999986543
No 232
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=63.78 E-value=6.9 Score=33.08 Aligned_cols=39 Identities=15% Similarity=0.240 Sum_probs=31.5
Q ss_pred CCceeeCcceeEEEEcCCceEEEEcCCcEEEeCEEEEecCh
Q 024393 15 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 55 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~ 55 (268)
+++++++++|.+|+.++. .|.+.+|+++.+|++|+|+-.
T Consensus 79 ~i~~~~~~~v~~id~~~~--~v~~~~g~~~~~d~lvlAtG~ 117 (415)
T 3lxd_A 79 AVEMKLGAEVVSLDPAAH--TVKLGDGSAIEYGKLIWATGG 117 (415)
T ss_dssp TEEEEETCCEEEEETTTT--EEEETTSCEEEEEEEEECCCE
T ss_pred CcEEEeCCEEEEEECCCC--EEEECCCCEEEeeEEEEccCC
Confidence 457999999999987654 455678889999999999863
No 233
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=62.18 E-value=21 Score=28.36 Aligned_cols=38 Identities=16% Similarity=0.222 Sum_probs=29.2
Q ss_pred eeCcceeEEEEcCCceEEEEcCCcEEEeCEEEEecChh
Q 024393 19 RLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 56 (268)
Q Consensus 19 ~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~ 56 (268)
.....|..+....+...+.+.+++++.+|+||+|+-..
T Consensus 83 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~liiATG~~ 120 (314)
T 4a5l_A 83 IITETIDHVDFSTQPFKLFTEEGKEVLTKSVIIATGAT 120 (314)
T ss_dssp EECCCEEEEECSSSSEEEEETTCCEEEEEEEEECCCEE
T ss_pred EEEeEEEEeecCCCceEEEECCCeEEEEeEEEEccccc
Confidence 34456777777777777778888899999999999753
No 234
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=61.26 E-value=9.2 Score=32.63 Aligned_cols=43 Identities=19% Similarity=0.178 Sum_probs=30.2
Q ss_pred HHHhc-CCceeeCcceeEEEEcCCceEEEE--cC-----CcEEEeCEEEEecC
Q 024393 10 NTLAK-GLDIRLGHRVTKITRHYIGVKVTV--EG-----GKTFVADAVVVAVP 54 (268)
Q Consensus 10 ~~l~~-~l~i~~~~~V~~I~~~~~~v~v~~--~~-----g~~~~ad~VI~a~p 54 (268)
+.|.+ ++++++++.|++|+. +++.+.. .+ ++++.+|.||++++
T Consensus 216 ~~l~~~gI~~~~~~~v~~v~~--~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g 266 (437)
T 3sx6_A 216 KGLKEEGIEAYTNCKVTKVED--NKMYVTQVDEKGETIKEMVLPVKFGMMIPA 266 (437)
T ss_dssp HHHHHTTCEEECSEEEEEEET--TEEEEEEECTTSCEEEEEEEECSEEEEECC
T ss_pred HHHHHCCCEEEcCCEEEEEEC--CeEEEEecccCCccccceEEEEeEEEEcCC
Confidence 44433 689999999999973 4444443 23 46789999999865
No 235
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=60.90 E-value=13 Score=35.68 Aligned_cols=44 Identities=16% Similarity=0.253 Sum_probs=35.5
Q ss_pred hcCCCCCeeeeecccCCCCCccchhhHHHHHHHHHHHHHHHHHHhC
Q 024393 199 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLERYG 244 (268)
Q Consensus 199 ~~~p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i~~~l~~~~~ 244 (268)
+++..++||.+||.... +..+..|+..|+.||..|...|..+.+
T Consensus 469 ~~Ts~~~VfA~GD~~~~--~~~~~~A~~~G~~aA~~i~~~L~~~~~ 512 (1025)
T 1gte_A 469 MQTSEPWVFAGGDIVGM--ANTTVESVNDGKQASWYIHKYIQAQYG 512 (1025)
T ss_dssp CBCSSTTEEECSGGGCS--CCCHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CccCCCCEEEeCCCCCC--chHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 34567899999999864 347788999999999999988876544
No 236
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=59.33 E-value=12 Score=31.89 Aligned_cols=42 Identities=14% Similarity=0.093 Sum_probs=32.6
Q ss_pred CCceeeCcceeEEEEcCCceEEEEcC-C--cEEEeCEEEEecChh
Q 024393 15 GLDIRLGHRVTKITRHYIGVKVTVEG-G--KTFVADAVVVAVPLG 56 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~v~~~~-g--~~~~ad~VI~a~p~~ 56 (268)
+++++++++|.+|+.+...+.+.... + .++.+|++|+|+-..
T Consensus 71 ~i~~~~~~~V~~id~~~~~~~~~~~~~~~~~~~~yd~lVIATGs~ 115 (437)
T 4eqs_A 71 QITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGAS 115 (437)
T ss_dssp CCEEEETEEEEEEETTTTEEEEEETTTTEEEEEECSEEEECCCEE
T ss_pred CCEEEeCCeEEEEEccCcEEEEEeccCCceEEEEcCEEEECCCCc
Confidence 56789999999999888777765533 2 467899999998753
No 237
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=58.67 E-value=7 Score=33.36 Aligned_cols=44 Identities=23% Similarity=0.138 Sum_probs=33.1
Q ss_pred hcC-CCCCeeeeecccCCCC----------CccchhhHHHHHHHHHHHHHHHHHH
Q 024393 199 LRI-PVDNLFFAGEATSMSY----------PGSVHGAFSTGLMAAEDCRMRVLER 242 (268)
Q Consensus 199 ~~~-p~~~l~~aG~~~~~~~----------~g~~~gA~~Sg~~aa~~i~~~l~~~ 242 (268)
+++ ..+|||.+||...... +-....|...|..+|+.|...+..+
T Consensus 292 l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~qg~~aA~ni~~~l~g~ 346 (437)
T 3sx6_A 292 QRSKKYANIFAAGIAIAIPPVETTPVPTGAPKTGYMIESMVSAAVHNIKADLEGR 346 (437)
T ss_dssp SBBSSCTTEEECGGGBCCCCSCCCSSCCCCCCCHHHHHHHHHHHHHHHHHHTTTS
T ss_pred ccCCCCCCEEEEEEEeccCCcCCCcCCCCCCcHHHHHHHHHHHHHHHHHHHhcCC
Confidence 444 4789999999986421 2356679999999999999887654
No 238
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=57.85 E-value=13 Score=32.98 Aligned_cols=41 Identities=17% Similarity=0.243 Sum_probs=31.0
Q ss_pred CCceeeCcceeEEEEcC-CceE-EEEcC---Cc--EEEeC-EEEEecCh
Q 024393 15 GLDIRLGHRVTKITRHY-IGVK-VTVEG---GK--TFVAD-AVVVAVPL 55 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~-~~v~-v~~~~---g~--~~~ad-~VI~a~p~ 55 (268)
+++|++++.|++|..++ +++. |.+.+ |+ ++.|+ .||+|+-.
T Consensus 223 ~~~i~~~~~V~~i~~~~~~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~ 271 (546)
T 2jbv_A 223 NFTLLTGLRARQLVFDADRRCTGVDIVDSAFGHTHRLTARNEVVLSTGA 271 (546)
T ss_dssp TEEEECSCEEEEEEECTTSBEEEEEEESSTTSCEEEEEEEEEEEECSHH
T ss_pred CcEEEeCCEEEEEEECCCCeEEEEEEEECCCCcEEEEEeCccEEEecCc
Confidence 46899999999999987 5543 55433 53 67898 89998865
No 239
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=57.69 E-value=6.5 Score=33.29 Aligned_cols=36 Identities=25% Similarity=0.404 Sum_probs=26.8
Q ss_pred CCCCCeeeeecccCC-CCC-c-cchhhHHHHHHHHHHHH
Q 024393 201 IPVDNLFFAGEATSM-SYP-G-SVHGAFSTGLMAAEDCR 236 (268)
Q Consensus 201 ~p~~~l~~aG~~~~~-~~~-g-~~~gA~~Sg~~aa~~i~ 236 (268)
+.+++|||||+-+.- ++. | .+..|..||..|++.+.
T Consensus 361 ~~~~gly~~GE~ldv~g~~GGynlq~a~~sg~~ag~~~~ 399 (401)
T 2gqf_A 361 NQVSGLYFIGEVLDVTGWLGGYNFQWAWSSAYACALSIS 399 (401)
T ss_dssp SSSTTEEECGGGBSCEECTTTHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEEEeEEeccCCCCHHHHHHHHHHHHHHHHHh
Confidence 457999999997653 122 2 45679999999998773
No 240
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=57.19 E-value=16 Score=33.20 Aligned_cols=49 Identities=18% Similarity=0.046 Sum_probs=35.1
Q ss_pred HHHHHHhc---CCceeeCcceeEEEEcCC---ceE-EEE---cCCc--EEEeCEEEEecCh
Q 024393 7 PVINTLAK---GLDIRLGHRVTKITRHYI---GVK-VTV---EGGK--TFVADAVVVAVPL 55 (268)
Q Consensus 7 ~l~~~l~~---~l~i~~~~~V~~I~~~~~---~v~-v~~---~~g~--~~~ad~VI~a~p~ 55 (268)
.|.+++.+ +++|+.++.|.+|..+++ ++. |.. .+|+ .+.|+.||+|+--
T Consensus 171 ~L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG 231 (662)
T 3gyx_A 171 IVAEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGG 231 (662)
T ss_dssp HHHHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCC
T ss_pred HHHHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCc
Confidence 34555544 689999999999988776 543 322 3453 5789999999964
No 241
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=56.53 E-value=10 Score=32.94 Aligned_cols=38 Identities=29% Similarity=0.450 Sum_probs=30.8
Q ss_pred HhcCCCCCeeeeecccCCCCCccchhhHHHHHHHHHHHHH
Q 024393 198 RLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 237 (268)
Q Consensus 198 ~~~~p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i~~ 237 (268)
.+++..++||.+||.... +.....|...|+.||..|..
T Consensus 300 ~~~t~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~~ 337 (492)
T 3ic9_A 300 TLQTSVDHIFVAGDANNT--LTLLHEAADDGKVAGTNAGA 337 (492)
T ss_dssp TCBCSSTTEEECGGGGTS--SCSHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCCEEEEEecCCC--CccHHHHHHHHHHHHHHHcC
Confidence 355667899999999875 34677899999999999874
No 242
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=56.28 E-value=10 Score=32.69 Aligned_cols=38 Identities=21% Similarity=0.381 Sum_probs=30.7
Q ss_pred HhcCCCCCeeeeecccCCCCCccchhhHHHHHHHHHHHHH
Q 024393 198 RLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 237 (268)
Q Consensus 198 ~~~~p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i~~ 237 (268)
.+++..++||.+||.... +.....|...|+.||+.|..
T Consensus 295 ~~~t~~~~Iya~GD~~~~--~~~~~~A~~~g~~aa~~i~~ 332 (466)
T 3l8k_A 295 TMKTNIPNVFATGDANGL--APYYHAAVRMSIAAANNIMA 332 (466)
T ss_dssp TCBCSSTTEEECGGGTCS--CCSHHHHHHHHHHHHHHHHT
T ss_pred CccCCCCCEEEEEecCCC--CccHhHHHHHHHHHHHHHhC
Confidence 345667899999999875 34678899999999999863
No 243
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=56.02 E-value=7.5 Score=33.88 Aligned_cols=41 Identities=24% Similarity=0.173 Sum_probs=31.6
Q ss_pred CCceeeCcceeEEEEcCCceEEEE-cCCc--EEEeCEEEEecCh
Q 024393 15 GLDIRLGHRVTKITRHYIGVKVTV-EGGK--TFVADAVVVAVPL 55 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~v~~-~~g~--~~~ad~VI~a~p~ 55 (268)
++++++++.|.+|..+++.+.+.. .+++ ++.+|++|+|+-.
T Consensus 174 ~v~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa 217 (493)
T 1y56_A 174 NTKIYLETSALGVFDKGEYFLVPVVRGDKLIEILAKRVVLATGA 217 (493)
T ss_dssp TEEEETTEEECCCEECSSSEEEEEEETTEEEEEEESCEEECCCE
T ss_pred CCEEEcCCEEEEEEcCCcEEEEEEecCCeEEEEECCEEEECCCC
Confidence 456889999999998877766544 4454 6889999999864
No 244
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=55.69 E-value=26 Score=30.66 Aligned_cols=48 Identities=10% Similarity=0.061 Sum_probs=31.8
Q ss_pred HHHHh-cCCceeeCcceeEEEEcC----CceEEE--EcCC-c--EEEeCEEEEecChh
Q 024393 9 INTLA-KGLDIRLGHRVTKITRHY----IGVKVT--VEGG-K--TFVADAVVVAVPLG 56 (268)
Q Consensus 9 ~~~l~-~~l~i~~~~~V~~I~~~~----~~v~v~--~~~g-~--~~~ad~VI~a~p~~ 56 (268)
.+.|. ++++|++++.|.+|+..+ +++.+. ..+| + ++.+|.||+++...
T Consensus 257 ~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~ 314 (519)
T 3qfa_A 257 GEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRD 314 (519)
T ss_dssp HHHHHHTTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCEE
T ss_pred HHHHHHCCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCCc
Confidence 33443 367899999998887543 344443 3455 2 56799999998653
No 245
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=55.31 E-value=11 Score=32.54 Aligned_cols=37 Identities=19% Similarity=0.153 Sum_probs=29.7
Q ss_pred hcCCCCCeeeeecccCCCCCccchhhHHHHHHHHHHHH
Q 024393 199 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCR 236 (268)
Q Consensus 199 ~~~p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i~ 236 (268)
+++..++||.+||..... +.....|...|+.||+.|+
T Consensus 314 ~~t~~~~IyA~GD~~~~~-~~~~~~A~~~g~~aa~~i~ 350 (483)
T 3dgh_A 314 EATNVANIYAVGDIIYGK-PELTPVAVLAGRLLARRLY 350 (483)
T ss_dssp CBCSSTTEEECSTTBTTS-CCCHHHHHHHHHHHHHHHH
T ss_pred CccCCCCEEEEEcccCCC-CccHHHHHHHHHHHHHHHc
Confidence 456678999999997432 3467889999999999986
No 246
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=55.16 E-value=11 Score=32.48 Aligned_cols=38 Identities=13% Similarity=0.042 Sum_probs=30.6
Q ss_pred HhcCCCCCeeeeecccCCCCCccchhhHHHHHHHHHHHHH
Q 024393 198 RLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 237 (268)
Q Consensus 198 ~~~~p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i~~ 237 (268)
.+++..++||.+||.... +.....|...|+.+|+.|..
T Consensus 293 ~~~t~~~~iya~GD~~~~--~~~~~~A~~~g~~aa~~i~g 330 (463)
T 4dna_A 293 FSRTSTPGIYALGDVTDR--VQLTPVAIHEAMCFIETEYK 330 (463)
T ss_dssp TCBCSSTTEEECSGGGSS--CCCHHHHHHHHHHHHHHHHS
T ss_pred CCCCCCCCEEEEEecCCC--CCChHHHHHHHHHHHHHHcC
Confidence 345667899999998864 34677899999999999863
No 247
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=54.43 E-value=11 Score=32.50 Aligned_cols=38 Identities=13% Similarity=0.037 Sum_probs=30.3
Q ss_pred HhcCCCCCeeeeecccCCCCCccchhhHHHHHHHHHHHHH
Q 024393 198 RLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 237 (268)
Q Consensus 198 ~~~~p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i~~ 237 (268)
.+++..++||.+||.... +.....|...|+.||+.|..
T Consensus 318 ~~~t~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~~ 355 (478)
T 3dk9_A 318 FQNTNVKGIYAVGDVCGK--ALLTPVAIAAGRKLAHRLFE 355 (478)
T ss_dssp TCBCSSTTEEECGGGGCS--SCCHHHHHHHHHHHHHHHHS
T ss_pred CcccCCCCEEEEEecCCC--CccHhHHHHHHHHHHHHHcC
Confidence 345667899999999843 35778899999999999863
No 248
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=54.41 E-value=12 Score=32.44 Aligned_cols=39 Identities=15% Similarity=0.185 Sum_probs=30.2
Q ss_pred HhcCCCCCeeeeecccCCCCCccchhhHHHHHHHHHHHHH
Q 024393 198 RLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 237 (268)
Q Consensus 198 ~~~~p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i~~ 237 (268)
.+++..++||.+||..... +.....|...|+.||+.|..
T Consensus 313 ~~~t~~~~IyA~GD~~~~~-~~~~~~A~~~g~~aa~~i~g 351 (488)
T 3dgz_A 313 QEATSVPHIYAIGDVAEGR-PELTPTAIKAGKLLAQRLFG 351 (488)
T ss_dssp TSBCSSTTEEECGGGBTTC-CCCHHHHHHHHHHHHHHHHS
T ss_pred CCccCCCCEEEeEEecCCC-CcchhHHHHHHHHHHHHHcC
Confidence 3456678999999997432 34677899999999999863
No 249
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=54.41 E-value=13 Score=31.24 Aligned_cols=38 Identities=18% Similarity=0.263 Sum_probs=30.1
Q ss_pred CCceeeCcceeEEEEcCCceEEEEcCCcEEEeCEEEEecCh
Q 024393 15 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 55 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~ 55 (268)
++++++ ++|++|+.+++ .+.+.+|+++.+|++|+|+-.
T Consensus 71 ~i~~~~-~~v~~id~~~~--~v~~~~g~~~~~d~lvlAtG~ 108 (404)
T 3fg2_P 71 AIELIS-DRMVSIDREGR--KLLLASGTAIEYGHLVLATGA 108 (404)
T ss_dssp TEEEEC-CCEEEEETTTT--EEEESSSCEEECSEEEECCCE
T ss_pred CCEEEE-EEEEEEECCCC--EEEECCCCEEECCEEEEeeCC
Confidence 456788 99999987665 455678889999999999864
No 250
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=53.60 E-value=15 Score=31.36 Aligned_cols=39 Identities=31% Similarity=0.463 Sum_probs=30.0
Q ss_pred CCceeeCcceeEEEEcCCceEEEEcCC-cEEEeCEEEEecCh
Q 024393 15 GLDIRLGHRVTKITRHYIGVKVTVEGG-KTFVADAVVVAVPL 55 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~v~~~~g-~~~~ad~VI~a~p~ 55 (268)
+++++++++|.+|+.+ .+.+.+.++ +++.+|++|+|+-.
T Consensus 73 gi~v~~~~~v~~i~~~--~~~v~~~~g~~~~~~d~lviAtG~ 112 (449)
T 3kd9_A 73 GIDLHLNAEVIEVDTG--YVRVRENGGEKSYEWDYLVFANGA 112 (449)
T ss_dssp TCEEETTCEEEEECSS--EEEEECSSSEEEEECSEEEECCCE
T ss_pred CcEEEecCEEEEEecC--CCEEEECCceEEEEcCEEEECCCC
Confidence 5679999999988643 355666666 48999999999864
No 251
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=53.14 E-value=13 Score=32.61 Aligned_cols=38 Identities=13% Similarity=0.088 Sum_probs=30.3
Q ss_pred HhcCCCCCeeeeecccCCCCCccchhhHHHHHHHHHHHH
Q 024393 198 RLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCR 236 (268)
Q Consensus 198 ~~~~p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i~ 236 (268)
.+++..++||.+||..... +.....|...|+.||+.|+
T Consensus 341 ~~~Ts~~~IyA~GD~~~g~-~~~~~~A~~~g~~aa~~i~ 378 (519)
T 3qfa_A 341 EEQTNVPYIYAIGDILEDK-VELTPVAIQAGRLLAQRLY 378 (519)
T ss_dssp TSBCSSTTEEECGGGBSSS-CCCHHHHHHHHHHHHHHHH
T ss_pred CCccCCCCEEEEEeccCCC-CccHHHHHHHHHHHHHHHc
Confidence 3556778999999998432 3577889999999999986
No 252
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=53.11 E-value=9.4 Score=31.68 Aligned_cols=40 Identities=20% Similarity=0.109 Sum_probs=31.4
Q ss_pred CCCeeeeecccC-----CCCCccchhhHHHHHHHHHHHHHHHHHH
Q 024393 203 VDNLFFAGEATS-----MSYPGSVHGAFSTGLMAAEDCRMRVLER 242 (268)
Q Consensus 203 ~~~l~~aG~~~~-----~~~~g~~~gA~~Sg~~aa~~i~~~l~~~ 242 (268)
+++||.+|.... +.-+..+-+=+.||.+||+.|++.|+.+
T Consensus 293 ~~gl~~~gm~~~~~~g~~rmgp~fg~m~~sg~~~a~~~~~~~~~~ 337 (344)
T 3jsk_A 293 VPGLIVGGMELSEIDGANRMGPTFGAMALSGVKAAHEAIRVFDLR 337 (344)
T ss_dssp ETTEEECGGGHHHHHTCEECCSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCEEEechhhHhhcCCCCCCcccceeeecCHHHHHHHHHHHHhh
Confidence 479999998753 2223467778899999999999988775
No 253
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=53.06 E-value=12 Score=32.09 Aligned_cols=36 Identities=25% Similarity=0.393 Sum_probs=29.3
Q ss_pred hcCCCCCeeeeecccCCCCCccchhhHHHHHHHHHHHH
Q 024393 199 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCR 236 (268)
Q Consensus 199 ~~~p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i~ 236 (268)
+++..++||.+||.... +.....|...|..||+.|.
T Consensus 297 ~~t~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~ 332 (464)
T 2a8x_A 297 MRTNVGHIYAIGDVNGL--LQLAHVAEAQGVVAAETIA 332 (464)
T ss_dssp SBCSSTTEEECGGGGCS--SCSHHHHHHHHHHHHHHHH
T ss_pred CccCCCCEEEeECcCCC--ccCHHHHHHHHHHHHHHhc
Confidence 45567899999999864 3466789999999999986
No 254
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=52.96 E-value=26 Score=29.02 Aligned_cols=50 Identities=10% Similarity=0.126 Sum_probs=33.3
Q ss_pred HHHHHHhc--CCceeeCcceeEEEEcC-----------------C--ceE-EEE------cC--------CcEEEeCEEE
Q 024393 7 PVINTLAK--GLDIRLGHRVTKITRHY-----------------I--GVK-VTV------EG--------GKTFVADAVV 50 (268)
Q Consensus 7 ~l~~~l~~--~l~i~~~~~V~~I~~~~-----------------~--~v~-v~~------~~--------g~~~~ad~VI 50 (268)
.|.+.+.+ +++|+.++.|+++..++ + ++. |.+ .+ ..++.|+.||
T Consensus 165 ~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~Ak~VV 244 (344)
T 3jsk_A 165 TVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTINAPVII 244 (344)
T ss_dssp HHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEECSEEE
T ss_pred HHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEEEcCEEE
Confidence 44455544 56899999999998765 2 322 332 12 2478999999
Q ss_pred EecChh
Q 024393 51 VAVPLG 56 (268)
Q Consensus 51 ~a~p~~ 56 (268)
.|+-..
T Consensus 245 ~ATG~~ 250 (344)
T 3jsk_A 245 STTGHD 250 (344)
T ss_dssp ECCCSS
T ss_pred ECCCCC
Confidence 998654
No 255
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=52.41 E-value=11 Score=32.51 Aligned_cols=41 Identities=7% Similarity=-0.052 Sum_probs=32.4
Q ss_pred CCCCCeeeeecccCCCCCccchhhHHHHHHHHHHHHHHHHHH
Q 024393 201 IPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLER 242 (268)
Q Consensus 201 ~p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i~~~l~~~ 242 (268)
+..+++|.+||..... .+.+..|...|..+|..|+..+...
T Consensus 349 t~~pgvya~GD~~~gp-~~~i~~a~~~g~~~a~~i~~~l~~~ 389 (456)
T 1lqt_A 349 NGSPNEYVVGWIKRGP-TGVIGTNKKDAQDTVDTLIKNLGNA 389 (456)
T ss_dssp TTCSSEEECTHHHHCS-CSCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeccCCCC-chhHHHHHHHHHHHHHHHHHHHHhC
Confidence 3468999999987542 3456679999999999999888664
No 256
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=52.37 E-value=13 Score=32.01 Aligned_cols=38 Identities=18% Similarity=0.164 Sum_probs=30.6
Q ss_pred HhcCCCCCeeeeecccCCCCCccchhhHHHHHHHHHHHHH
Q 024393 198 RLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 237 (268)
Q Consensus 198 ~~~~p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i~~ 237 (268)
.+++..++||.+||.... +.....|...|+.||+.|..
T Consensus 305 ~~~t~~~~Iya~GD~~~~--~~~~~~A~~~g~~aa~~i~g 342 (476)
T 3lad_A 305 YCATSVPGVYAIGDVVRG--AMLAHKASEEGVVVAERIAG 342 (476)
T ss_dssp TSBCSSTTEEECGGGSSS--CCCHHHHHHHHHHHHHHHHH
T ss_pred CcccCCCCEEEEEccCCC--cccHHHHHHHHHHHHHHhcC
Confidence 355678999999999854 34678899999999999863
No 257
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=52.33 E-value=14 Score=31.85 Aligned_cols=38 Identities=21% Similarity=0.224 Sum_probs=30.6
Q ss_pred HhcCCCCCeeeeecccCCCCCccchhhHHHHHHHHHHHHH
Q 024393 198 RLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 237 (268)
Q Consensus 198 ~~~~p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i~~ 237 (268)
.+++..++||.+||.... +.....|...|..||+.|..
T Consensus 312 ~~~t~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~~ 349 (478)
T 1v59_A 312 QFNSKFPHIKVVGDVTFG--PMLAHKAEEEGIAAVEMLKT 349 (478)
T ss_dssp TSBCSSTTEEECGGGSSS--CCCHHHHHHHHHHHHHHHHH
T ss_pred CCccCCCCEEEeeccCCC--cccHHHHHHHHHHHHHHHcC
Confidence 345667899999999864 34677899999999999974
No 258
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=52.20 E-value=33 Score=28.15 Aligned_cols=50 Identities=8% Similarity=0.074 Sum_probs=33.2
Q ss_pred HHHHHHhc--CCceeeCcceeEEEEcC----C--ceE-EEEc--------------CCcEEEe---------------CE
Q 024393 7 PVINTLAK--GLDIRLGHRVTKITRHY----I--GVK-VTVE--------------GGKTFVA---------------DA 48 (268)
Q Consensus 7 ~l~~~l~~--~l~i~~~~~V~~I~~~~----~--~v~-v~~~--------------~g~~~~a---------------d~ 48 (268)
.|.+++.+ +++|+.+++|+++..++ + ++. |.+. ++.++.| |.
T Consensus 151 ~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~~~~~~ 230 (326)
T 2gjc_A 151 TVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLSQKHGV 230 (326)
T ss_dssp HHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCCSSTTCCE
T ss_pred HHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEEEEeeccccccccccccCCE
Confidence 44554543 56899999999998873 3 433 3321 3357889 99
Q ss_pred EEEecChh
Q 024393 49 VVVAVPLG 56 (268)
Q Consensus 49 VI~a~p~~ 56 (268)
||.|+-..
T Consensus 231 VV~ATG~~ 238 (326)
T 2gjc_A 231 ILSTTGHD 238 (326)
T ss_dssp EEECCCCC
T ss_pred EEECcCCC
Confidence 99988643
No 259
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=51.87 E-value=13 Score=32.18 Aligned_cols=38 Identities=11% Similarity=0.122 Sum_probs=30.2
Q ss_pred hcCCCCCeeeeecccCCCCCccchhhHHHHHHHHHHHHHH
Q 024393 199 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMR 238 (268)
Q Consensus 199 ~~~p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i~~~ 238 (268)
+++..++||.+||.... +.....|...|+.+|+.|+..
T Consensus 314 ~~t~~~~Iya~GD~~~~--~~~~~~A~~~g~~aa~~i~~~ 351 (484)
T 3o0h_A 314 MTTNVSHIWAVGDVTGH--IQLTPVAIHDAMCFVKNAFEN 351 (484)
T ss_dssp SBCSSTTEEECGGGGTS--CCCHHHHHHHHHHHHHHHHC-
T ss_pred CCCCCCCEEEEEecCCC--CcCHHHHHHHHHHHHHHHcCC
Confidence 45667899999999864 346778999999999999753
No 260
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=51.85 E-value=14 Score=33.54 Aligned_cols=38 Identities=39% Similarity=0.648 Sum_probs=29.2
Q ss_pred CCCCeeeeecccCCCCCccchhhHHHHHHHHHHHHHHHHHH
Q 024393 202 PVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLER 242 (268)
Q Consensus 202 p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i~~~l~~~ 242 (268)
.++||||||+-.... +.+-|..+|..|+..+...+..+
T Consensus 377 ~~~gLf~AGqi~g~~---Gy~eA~a~G~~AG~naa~~~~~~ 414 (641)
T 3cp8_A 377 PVENLFFAGQINGTS---GYEEAAAQGLMAGINAVRKILGK 414 (641)
T ss_dssp SSBTEEECSGGGTBC---CHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CcCCEEEEEeecCCc---cHHHHHHHHHHHHHHHHHHhcCC
Confidence 368999999998762 56688889999998876655443
No 261
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=51.70 E-value=13 Score=32.06 Aligned_cols=37 Identities=14% Similarity=0.068 Sum_probs=29.9
Q ss_pred hcCCCCCeeeeecccCCCCCccchhhHHHHHHHHHHHHH
Q 024393 199 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 237 (268)
Q Consensus 199 ~~~p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i~~ 237 (268)
+++..++||.+||.... +.....|...|+.+|+.|+.
T Consensus 310 ~~t~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~~ 346 (479)
T 2hqm_A 310 QNTNVPNIYSLGDVVGK--VELTPVAIAAGRKLSNRLFG 346 (479)
T ss_dssp CBCSSTTEEECGGGTTS--SCCHHHHHHHHHHHHHHHHS
T ss_pred CccCCCCEEEEEecCCC--cccHHHHHHHHHHHHHHhcC
Confidence 45667899999999654 34678899999999999864
No 262
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=51.35 E-value=14 Score=31.73 Aligned_cols=37 Identities=14% Similarity=0.132 Sum_probs=29.5
Q ss_pred hcCCCCCeeeeecccCCCCCccchhhHHHHHHHHHHHHH
Q 024393 199 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 237 (268)
Q Consensus 199 ~~~p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i~~ 237 (268)
+++..+++|.+||.... +.....|...|+.+|+.|..
T Consensus 291 ~~t~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~~ 327 (450)
T 1ges_A 291 QNTNIEGIYAVGDNTGA--VELTPVAVAAGRRLSERLFN 327 (450)
T ss_dssp SBCSSTTEEECSGGGTS--CCCHHHHHHHHHHHHHHHHT
T ss_pred CccCCCCEEEEeccCCC--CccHHHHHHHHHHHHHHHcC
Confidence 35567899999999754 34677899999999999864
No 263
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=51.10 E-value=13 Score=32.21 Aligned_cols=37 Identities=19% Similarity=0.242 Sum_probs=30.0
Q ss_pred hcCCCCCeeeeecccCCCCCccchhhHHHHHHHHHHHHH
Q 024393 199 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 237 (268)
Q Consensus 199 ~~~p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i~~ 237 (268)
+++..++||.+||.... +.....|...|+.||+.|..
T Consensus 326 ~~t~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~g 362 (491)
T 3urh_A 326 FQTSIAGVYAIGDVVRG--PMLAHKAEDEGVAVAEIIAG 362 (491)
T ss_dssp CBCSSTTEEECGGGSSS--CCCHHHHHHHHHHHHHHHTT
T ss_pred CCCCCCCEEEEEecCCC--ccchhHHHHHHHHHHHHHcC
Confidence 45667899999999854 35788899999999998863
No 264
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=50.46 E-value=26 Score=31.82 Aligned_cols=37 Identities=11% Similarity=0.126 Sum_probs=27.2
Q ss_pred CCCeeeeecccCC---CCCccchhhHHHHHHHHHHHHHHH
Q 024393 203 VDNLFFAGEATSM---SYPGSVHGAFSTGLMAAEDCRMRV 239 (268)
Q Consensus 203 ~~~l~~aG~~~~~---~~~g~~~gA~~Sg~~aa~~i~~~l 239 (268)
.++++++||..|. ..+.+++.+++.|...+..|..-+
T Consensus 350 ~gRV~L~GDAAH~~~P~~GqG~N~gi~DA~nLawkLa~vl 389 (665)
T 1pn0_A 350 DERVFIAGDACHTHSPKAGQGMNTSMMDTYNLGWKLGLVL 389 (665)
T ss_dssp TTTEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECccccCCCcccCCcchhHHHHHHHHHHHHHHH
Confidence 3689999999764 233588889998888777665433
No 265
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=50.30 E-value=11 Score=32.54 Aligned_cols=42 Identities=12% Similarity=0.214 Sum_probs=33.0
Q ss_pred cCC-CCCeeeeecccCCCCCccchhhHHHHHHHHHHHHHHHHHH
Q 024393 200 RIP-VDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLER 242 (268)
Q Consensus 200 ~~p-~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i~~~l~~~ 242 (268)
++. .++||.+||..... .+.+..|+..|..+|+.|+..+...
T Consensus 355 rt~~~p~vya~Gd~~~g~-~~~i~~a~~~g~~aa~~i~~~l~~~ 397 (460)
T 1cjc_A 355 RVVDVPGLYCSGWVKRGP-TGVITTTMTDSFLTGQILLQDLKAG 397 (460)
T ss_dssp EETTCTTEEECTHHHHCT-TCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCcCCCCEEEEEeCCcCC-CccHHHHHHHHHHHHHHHHHHHHhC
Confidence 444 68999999987532 3457789999999999999988763
No 266
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=50.25 E-value=15 Score=30.53 Aligned_cols=38 Identities=21% Similarity=0.114 Sum_probs=29.4
Q ss_pred CCceeeCcceeEEEEcCCceEEEEcCCcEEEeCEEEEecCh
Q 024393 15 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 55 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~ 55 (268)
++++++++.|..|..+++.+.+ +++++.+|++|+|+-.
T Consensus 74 ~v~~~~~~~v~~i~~~~~~v~~---~~~~~~~d~lviAtG~ 111 (384)
T 2v3a_A 74 NARILTHTRVTGIDPGHQRIWI---GEEEVRYRDLVLAWGA 111 (384)
T ss_dssp TCEEECSCCCCEEEGGGTEEEE---TTEEEECSEEEECCCE
T ss_pred CcEEEeCCEEEEEECCCCEEEE---CCcEEECCEEEEeCCC
Confidence 5678899999999876554443 3457999999999865
No 267
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=50.01 E-value=16 Score=32.58 Aligned_cols=38 Identities=18% Similarity=0.184 Sum_probs=29.9
Q ss_pred hcCCCCCeeeeecccCCCCCccchhhHHHHHHHHHHHHH
Q 024393 199 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 237 (268)
Q Consensus 199 ~~~p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i~~ 237 (268)
+++..++||.+||..... +.....|...|+.||+.|..
T Consensus 421 ~~ts~~~VyA~GD~~~~~-~~~~~~A~~~g~~aa~~i~~ 458 (598)
T 2x8g_A 421 EQTTVSNVYAIGDINAGK-PQLTPVAIQAGRYLARRLFA 458 (598)
T ss_dssp SBCSSTTEEECGGGBTTS-CCCHHHHHHHHHHHHHHHHH
T ss_pred CcCCCCCEEEEeeecCCC-CccHHHHHHhHHHHHHHHhc
Confidence 456678999999995432 34678899999999999864
No 268
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=49.98 E-value=40 Score=29.96 Aligned_cols=41 Identities=22% Similarity=0.156 Sum_probs=29.6
Q ss_pred CCceeeCcceeEEEEc------C---CceEEE--EcCCcEEE--eCEEEEecCh
Q 024393 15 GLDIRLGHRVTKITRH------Y---IGVKVT--VEGGKTFV--ADAVVVAVPL 55 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~------~---~~v~v~--~~~g~~~~--ad~VI~a~p~ 55 (268)
++++++++.+.+|... + +++.+. ..+|+++. +|.||+++..
T Consensus 340 gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~ 393 (598)
T 2x8g_A 340 GVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGR 393 (598)
T ss_dssp TCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCE
T ss_pred CCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCC
Confidence 6899999999888642 2 344443 45776665 9999999864
No 269
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=49.65 E-value=16 Score=32.54 Aligned_cols=43 Identities=21% Similarity=0.233 Sum_probs=33.6
Q ss_pred CCceeeCcceeEEEEcCC-ceE-EEEc------CC---------cEEEeCEEEEecChhh
Q 024393 15 GLDIRLGHRVTKITRHYI-GVK-VTVE------GG---------KTFVADAVVVAVPLGV 57 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~-~v~-v~~~------~g---------~~~~ad~VI~a~p~~~ 57 (268)
+++|+++++|++|..+++ .+. |.+. +| .++.||.||.|.-...
T Consensus 158 Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S 217 (584)
T 2gmh_A 158 GVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHG 217 (584)
T ss_dssp TCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTC
T ss_pred CCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCc
Confidence 578999999999998764 454 6665 23 5799999999987653
No 270
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=49.47 E-value=11 Score=31.72 Aligned_cols=40 Identities=15% Similarity=0.316 Sum_probs=31.0
Q ss_pred HhcCCCCCeeeeecccCCC--CCccchhhHHHHHHHHHHHHH
Q 024393 198 RLRIPVDNLFFAGEATSMS--YPGSVHGAFSTGLMAAEDCRM 237 (268)
Q Consensus 198 ~~~~p~~~l~~aG~~~~~~--~~g~~~gA~~Sg~~aa~~i~~ 237 (268)
.+++..+++|.+||..... ..+.+..|...|..||..|+.
T Consensus 252 ~~~t~~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~g 293 (385)
T 3klj_A 252 HMETSIKDIYACGDVAEFYGKNPGLINIANKQGEVAGLNACG 293 (385)
T ss_dssp TCBCSSTTEEECGGGEEETTBCCCCHHHHHHHHHHHHHHHTT
T ss_pred CcccCCCCEEEEEeeEecCCCcccHHHHHHHHHHHHHHHhcC
Confidence 3456788999999997521 135778899999999999963
No 271
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=48.74 E-value=15 Score=33.35 Aligned_cols=35 Identities=26% Similarity=0.417 Sum_probs=26.5
Q ss_pred CCCeeeeecccCCCCCccchhhHHHHHHHHHHHHHHHH
Q 024393 203 VDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVL 240 (268)
Q Consensus 203 ~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i~~~l~ 240 (268)
++||||||+-..+. +.+.|..+|..|+......+.
T Consensus 384 ~~gLf~AGqinGtt---GYeEAaaqGl~AG~nAa~~~~ 418 (651)
T 3ces_A 384 IQGLFFAGQINGTT---GYEEAAAQGLLAGLNAARLSA 418 (651)
T ss_dssp SBTEEECSGGGTCC---CHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCeEEEEEecCCc---ChHHHHHHHHHHHHHHHHHhc
Confidence 68999999998762 455788889888877654443
No 272
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=48.60 E-value=15 Score=31.52 Aligned_cols=37 Identities=19% Similarity=0.212 Sum_probs=29.7
Q ss_pred hcCCCCCeeeeecccCCCCCccchhhHHHHHHHHHHHHH
Q 024393 199 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 237 (268)
Q Consensus 199 ~~~p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i~~ 237 (268)
+++..++||.+||.... +....-|...|+.||+.|..
T Consensus 305 ~~t~~~~Iya~GD~~~~--~~~~~~A~~~g~~aa~~i~g 341 (470)
T 1dxl_A 305 FSTNVSGVYAIGDVIPG--PMLAHKAEEDGVACVEYLAG 341 (470)
T ss_dssp CBCSSTTEEECSTTSSS--CCCHHHHHHHHHHHHHHHTT
T ss_pred CccCCCCEEEEeccCCC--CccHHHHHHHHHHHHHHHcC
Confidence 45667899999999864 34567799999999999863
No 273
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=48.19 E-value=16 Score=31.32 Aligned_cols=36 Identities=33% Similarity=0.397 Sum_probs=29.4
Q ss_pred hcCCCCCeeeeecccCCCCCccchhhHHHHHHHHHHHH
Q 024393 199 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCR 236 (268)
Q Consensus 199 ~~~p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i~ 236 (268)
+++..++||.+||.... +.....|...|..||+.|.
T Consensus 296 ~~t~~~~Iya~GD~~~~--~~~~~~A~~~g~~aa~~i~ 331 (455)
T 1ebd_A 296 CRTSVPNIFAIGDIVPG--PALAHKASYEGKVAAEAIA 331 (455)
T ss_dssp CBCSSTTEEECGGGSSS--CCCHHHHHHHHHHHHHHHT
T ss_pred cccCCCCEEEEeccCCC--cccHHHHHHHHHHHHHHHc
Confidence 45667899999999865 3456789999999999986
No 274
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=47.95 E-value=16 Score=31.49 Aligned_cols=37 Identities=19% Similarity=0.338 Sum_probs=29.7
Q ss_pred hcCCCCCeeeeecccCCCCCccchhhHHHHHHHHHHHHH
Q 024393 199 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 237 (268)
Q Consensus 199 ~~~p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i~~ 237 (268)
+++..++||.+||.... +.....|...|+.||+.|..
T Consensus 308 ~~t~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~~ 344 (474)
T 1zmd_A 308 FQTKIPNIYAIGDVVAG--PMLAHKAEDEGIICVEGMAG 344 (474)
T ss_dssp CBCSSTTEEECGGGSSS--CCCHHHHHHHHHHHHHHHTT
T ss_pred CccCCCCEEEeeecCCC--CccHHHHHHHHHHHHHHhcC
Confidence 45567899999999864 34677899999999999863
No 275
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=47.43 E-value=17 Score=31.62 Aligned_cols=37 Identities=19% Similarity=0.184 Sum_probs=30.1
Q ss_pred hcCCCCCeeeeecccCCCCCccchhhHHHHHHHHHHHHH
Q 024393 199 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 237 (268)
Q Consensus 199 ~~~p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i~~ 237 (268)
+++..+++|.+||.... ......|...|+.+|+.|..
T Consensus 314 ~~t~~~~IyA~GD~~~~--~~l~~~A~~~g~~aa~~i~g 350 (490)
T 1fec_A 314 SKTNVDNIYAIGDVTDR--VMLTPVAINEGAAFVDTVFA 350 (490)
T ss_dssp CBCSSTTEEECGGGGCS--CCCHHHHHHHHHHHHHHHHS
T ss_pred CccCCCCEEEEeccCCC--ccCHHHHHHHHHHHHHHhcC
Confidence 45667899999999863 34778899999999999863
No 276
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=47.41 E-value=17 Score=31.68 Aligned_cols=36 Identities=19% Similarity=0.161 Sum_probs=29.5
Q ss_pred hcCCCCCeeeeecccCCCCCccchhhHHHHHHHHHHHH
Q 024393 199 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCR 236 (268)
Q Consensus 199 ~~~p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i~ 236 (268)
+++..++||.+||.... ......|...|+.+|+.|+
T Consensus 318 ~~t~~~~IyA~GD~~~~--~~l~~~A~~~g~~aa~~i~ 353 (495)
T 2wpf_A 318 SRTNVPNIYAIGDITDR--LMLTPVAINEGAALVDTVF 353 (495)
T ss_dssp CBCSSTTEEECGGGGCS--CCCHHHHHHHHHHHHHHHH
T ss_pred CccCCCCEEEEeccCCC--ccCHHHHHHHHHHHHHHhc
Confidence 45667899999999864 3467789999999999986
No 277
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=47.17 E-value=17 Score=32.83 Aligned_cols=42 Identities=12% Similarity=0.245 Sum_probs=30.3
Q ss_pred CCceeeCcceeEEEEcCC--ce-EEEEc---CCc--EEEeCEEEEecChh
Q 024393 15 GLDIRLGHRVTKITRHYI--GV-KVTVE---GGK--TFVADAVVVAVPLG 56 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~--~v-~v~~~---~g~--~~~ad~VI~a~p~~ 56 (268)
+++|++++.|++|..+++ ++ .|... +|+ ++.||.||+++-..
T Consensus 274 nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~ 323 (623)
T 3pl8_A 274 RFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAV 323 (623)
T ss_dssp EEEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEEEEEECSCTT
T ss_pred CEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECCEEEEcCCCc
Confidence 468999999999998753 32 24432 454 67799999998643
No 278
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=46.53 E-value=18 Score=31.13 Aligned_cols=37 Identities=19% Similarity=0.091 Sum_probs=29.3
Q ss_pred hcCCCCCeeeeecccCCCCCccchhhHHHHHHHHHHHHH
Q 024393 199 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 237 (268)
Q Consensus 199 ~~~p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i~~ 237 (268)
+++..++||.+||.... +.....|...|+.+|+.|+.
T Consensus 290 ~~t~~~~Iya~GD~~~~--~~~~~~A~~~g~~aa~~i~g 326 (463)
T 2r9z_A 290 QNTNVPGVYALGDITGR--DQLTPVAIAAGRRLAERLFD 326 (463)
T ss_dssp SBCSSTTEEECGGGGTS--CCCHHHHHHHHHHHHHHHHS
T ss_pred CccCCCCEEEEeecCCC--cccHHHHHHHHHHHHHHHcC
Confidence 34567899999999754 34677899999999998863
No 279
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=46.00 E-value=9.9 Score=32.36 Aligned_cols=34 Identities=29% Similarity=0.634 Sum_probs=23.2
Q ss_pred CCCCCeeeeecccCC-CCCc--cchhhHHHHHHHHHH
Q 024393 201 IPVDNLFFAGEATSM-SYPG--SVHGAFSTGLMAAED 234 (268)
Q Consensus 201 ~p~~~l~~aG~~~~~-~~~g--~~~gA~~Sg~~aa~~ 234 (268)
+.++||||||+-+.- ++.| .+.-|..||..|++.
T Consensus 380 k~~~gLy~aGE~lD~~~~~GGynlq~a~stG~~ag~~ 416 (417)
T 3v76_A 380 KEVPGLYFVGECVDVTGWLGGYNFQWAWASGFVAGQD 416 (417)
T ss_dssp TTSTTEEECGGGBSEEECSSSHHHHHHHHHHHHHHHH
T ss_pred cCCCCeEEEEEeEecccCCCCHHHHHHHHHHHHHhCc
Confidence 346899999965432 1122 567799999988764
No 280
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=45.86 E-value=18 Score=31.08 Aligned_cols=38 Identities=18% Similarity=0.228 Sum_probs=29.7
Q ss_pred hcCCCCCeeeeecccCCCCCccchhhHHHHHHHHHHHHH
Q 024393 199 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 237 (268)
Q Consensus 199 ~~~p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i~~ 237 (268)
+++..++||.+||.... .+.....|...|..||+.|..
T Consensus 302 ~~t~~~~IyA~GD~~~~-~~~~~~~A~~~g~~aa~~i~~ 339 (468)
T 2qae_A 302 FETSIPDVYAIGDVVDK-GPMLAHKAEDEGVACAEILAG 339 (468)
T ss_dssp SBCSSTTEEECGGGBSS-SCSCHHHHHHHHHHHHHHHTT
T ss_pred cccCCCCEEEeeccCCC-CCccHhHHHHHHHHHHHHHcC
Confidence 45567899999999872 134677899999999999863
No 281
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=45.42 E-value=18 Score=31.21 Aligned_cols=37 Identities=30% Similarity=0.506 Sum_probs=29.8
Q ss_pred hcCCCCCeeeeecccCCCCCccchhhHHHHHHHHHHHHH
Q 024393 199 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 237 (268)
Q Consensus 199 ~~~p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i~~ 237 (268)
+++..++||.+||.... +.....|...|+.||+.|..
T Consensus 312 ~~t~~~~IyA~GD~~~~--~~l~~~A~~~g~~aa~~i~g 348 (482)
T 1ojt_A 312 MRTNVPHIYAIGDIVGQ--PMLAHKAVHEGHVAAENCAG 348 (482)
T ss_dssp SBCSSTTEEECGGGTCS--SCCHHHHHHHHHHHHHHHTT
T ss_pred cccCCCCEEEEEcccCC--CccHHHHHHHHHHHHHHHcC
Confidence 45667899999999864 34677899999999999863
No 282
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=45.37 E-value=13 Score=31.84 Aligned_cols=37 Identities=19% Similarity=0.318 Sum_probs=26.6
Q ss_pred CCCCeeeeecccCCCCCccchhhHHHHHHHHHHHHHHHHH
Q 024393 202 PVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLE 241 (268)
Q Consensus 202 p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i~~~l~~ 241 (268)
.++||||||+-.... +.+.|..+|..|.......+..
T Consensus 327 ~~~~Lf~AGqi~G~~---Gy~eAaa~Gl~AG~naa~~~~g 363 (443)
T 3g5s_A 327 EAEGLYAAGVLAGVE---GYLESAATGFLAGLNAARKALG 363 (443)
T ss_dssp TEEEEEECGGGGTBC---SHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEECccccccH---HHHHHHHhHHHHHHHHHHHhcC
Confidence 368999999998762 4556777888888766554433
No 283
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=45.07 E-value=21 Score=30.45 Aligned_cols=37 Identities=27% Similarity=0.352 Sum_probs=29.6
Q ss_pred hcCCCCCeeeeecccCCCCCccchhhHHHHHHHHHHHHH
Q 024393 199 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 237 (268)
Q Consensus 199 ~~~p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i~~ 237 (268)
+++..+++|.+||.... +.....|...|..+|+.|..
T Consensus 290 ~~t~~~~iya~GD~~~~--~~~~~~A~~~g~~aa~~i~~ 326 (455)
T 2yqu_A 290 LRTRVPHIYAIGDVVRG--PMLAHKASEEGIAAVEHMVR 326 (455)
T ss_dssp SBCSSTTEEECGGGSSS--CCCHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCEEEEecCCCC--ccCHHHHHHhHHHHHHHHcC
Confidence 45557899999999865 34667899999999999974
No 284
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=44.79 E-value=19 Score=30.96 Aligned_cols=36 Identities=31% Similarity=0.492 Sum_probs=29.0
Q ss_pred hcCCCCCeeeeecccCCCCCccchhhHHHHHHHHHHHH
Q 024393 199 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCR 236 (268)
Q Consensus 199 ~~~p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i~ 236 (268)
+++..+++|.+||.... +.....|...|..+|+.|.
T Consensus 297 ~~t~~~~Iya~GD~~~~--~~l~~~A~~~g~~aa~~i~ 332 (464)
T 2eq6_A 297 METSVPGVYAIGDAARP--PLLAHKAMREGLIAAENAA 332 (464)
T ss_dssp CBCSSTTEEECGGGTCS--SCCHHHHHHHHHHHHHHHT
T ss_pred cccCCCCEEEEeccCCC--cccHHHHHHHHHHHHHHhc
Confidence 34567899999999865 3467789999999999986
No 285
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=44.05 E-value=9.2 Score=30.45 Aligned_cols=40 Identities=10% Similarity=0.022 Sum_probs=30.5
Q ss_pred CCCCeeeeecccCC-----CCCccchhhHHHHHHHHHHHHHHHHH
Q 024393 202 PVDNLFFAGEATSM-----SYPGSVHGAFSTGLMAAEDCRMRVLE 241 (268)
Q Consensus 202 p~~~l~~aG~~~~~-----~~~g~~~gA~~Sg~~aa~~i~~~l~~ 241 (268)
..+++|.+|+.+.. ..+..+.+++.||..+|..|.+.|++
T Consensus 232 ~~p~i~a~G~~~~~~~g~~~~gp~~~~~~~sG~~~a~~i~~~l~~ 276 (284)
T 1rp0_A 232 VVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAGQLALKALGL 276 (284)
T ss_dssp EETTEEECTHHHHHHHTCEECCSCCHHHHHHHHHHHHHHHHHTTC
T ss_pred ccCCEEEEeeehhhhcCCCCcChHHHHHHHhHHHHHHHHHHHhhh
Confidence 35799999987521 12346889999999999999987754
No 286
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=43.97 E-value=20 Score=30.82 Aligned_cols=36 Identities=31% Similarity=0.356 Sum_probs=29.5
Q ss_pred hcCCCCCeeeeecccCCCCCccchhhHHHHHHHHHHHH
Q 024393 199 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCR 236 (268)
Q Consensus 199 ~~~p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i~ 236 (268)
+++..+++|.+||.... +.....|...|..+|..|.
T Consensus 297 ~~t~~~~iya~GD~~~~--~~~~~~A~~~g~~aa~~i~ 332 (467)
T 1zk7_A 297 MRTSNPNIYAAGDCTDQ--PQFVYVAAAAGTRAAINMT 332 (467)
T ss_dssp CBCSSTTEEECSTTBSS--CCCHHHHHHHHHHHHHHHT
T ss_pred cccCCCCEEEEeccCCC--cccHHHHHHHHHHHHHHHc
Confidence 45667899999999875 3467789999999999885
No 287
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=43.86 E-value=11 Score=33.48 Aligned_cols=40 Identities=25% Similarity=0.375 Sum_probs=28.8
Q ss_pred cCCCCCeeeeecccCCCCC------ccchhhHHHHHHHHHHHHHHH
Q 024393 200 RIPVDNLFFAGEATSMSYP------GSVHGAFSTGLMAAEDCRMRV 239 (268)
Q Consensus 200 ~~p~~~l~~aG~~~~~~~~------g~~~gA~~Sg~~aa~~i~~~l 239 (268)
.+|+++||-||+....-++ .++-.|+..|+.|++.+.+..
T Consensus 518 g~~I~GLyAaGe~~~g~~g~~~~~g~sl~~~~v~Gr~Ag~~aa~~~ 563 (566)
T 1qo8_A 518 SKPIDGLFAAGEVTGGVHGYNRLGGNAIADTVVFGRIAGDNAAKHA 563 (566)
T ss_dssp SCEEEEEEECSTTBCSSSTTCCCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEeCCEEecccccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHh
Confidence 3689999999998643221 135568899999999886543
No 288
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=43.85 E-value=19 Score=31.21 Aligned_cols=36 Identities=19% Similarity=0.165 Sum_probs=29.3
Q ss_pred hcCCCCCeeeeecccCCCCCccchhhHHHHHHHHHHHH
Q 024393 199 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCR 236 (268)
Q Consensus 199 ~~~p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i~ 236 (268)
+++..++||.+||.... +.....|...|+.+|+.|.
T Consensus 305 ~~t~~~~IyA~GD~~~~--~~l~~~A~~~g~~aa~~i~ 340 (499)
T 1xdi_A 305 SRTLATGIYAAGDCTGL--LPLASVAAMQGRIAMYHAL 340 (499)
T ss_dssp SBCSSTTEEECSGGGTS--CSCHHHHHHHHHHHHHHHT
T ss_pred cccCCCCEEEEeccCCC--cccHHHHHHHHHHHHHHhc
Confidence 45667899999999865 3456789999999999986
No 289
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=42.89 E-value=20 Score=31.34 Aligned_cols=36 Identities=25% Similarity=0.344 Sum_probs=29.2
Q ss_pred hcCCCCCeeeeecccCCCCCccchhhHHHHHHHHHHHH
Q 024393 199 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCR 236 (268)
Q Consensus 199 ~~~p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i~ 236 (268)
+++..++||.+||.... +.....|...|..||+.|.
T Consensus 341 ~~t~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~ 376 (523)
T 1mo9_A 341 LQTSVPNVYAVGDLIGG--PMEMFKARKSGCYAARNVM 376 (523)
T ss_dssp SBCSSTTEEECGGGGCS--SCSHHHHHHHHHHHHHHHT
T ss_pred CccCCCCEEEEeecCCC--cccHHHHHHHHHHHHHHHc
Confidence 34557899999999865 3467789999999999986
No 290
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=42.76 E-value=17 Score=33.48 Aligned_cols=47 Identities=15% Similarity=0.145 Sum_probs=32.2
Q ss_pred HHHHHH-hcCCceeeCcceeEEEEcCCceEEEE--cCC-cE------------------EEeCEEEEecCh
Q 024393 7 PVINTL-AKGLDIRLGHRVTKITRHYIGVKVTV--EGG-KT------------------FVADAVVVAVPL 55 (268)
Q Consensus 7 ~l~~~l-~~~l~i~~~~~V~~I~~~~~~v~v~~--~~g-~~------------------~~ad~VI~a~p~ 55 (268)
.+.+.| .++++|++++.|.+|.. +++.+.. .++ ++ +.+|.||+++..
T Consensus 576 ~~~~~l~~~GV~i~~~~~v~~i~~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~ 644 (729)
T 1o94_A 576 NMMRRLHELHVEELGDHFCSRIEP--GRMEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGR 644 (729)
T ss_dssp HHHHHHHHTTCEEECSEEEEEEET--TEEEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCE
T ss_pred HHHHHHHhCCCEEEcCcEEEEEEC--CeEEEEEecCCceEEecccccccccccCCcceeeeCCEEEECCCC
Confidence 344555 44789999999999974 3444432 222 22 899999999875
No 291
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=42.74 E-value=30 Score=31.28 Aligned_cols=42 Identities=26% Similarity=0.356 Sum_probs=29.1
Q ss_pred cCCCCCeeeeecccCCCCCccchhhHHHHHHHHHHHHHHHHH
Q 024393 200 RIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLE 241 (268)
Q Consensus 200 ~~p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i~~~l~~ 241 (268)
.+++++||-||+....+.....-.|+..|+.|++.+.+.+..
T Consensus 428 ~t~I~GLyAaGe~a~~~~~r~~~~sl~~G~~ag~~aa~~~~~ 469 (643)
T 1jnr_A 428 MTTVKGLFAIGDCAGANPHKFSSGSFTEGRIAAKAAVRFILE 469 (643)
T ss_dssp BCSSBTEEECGGGBCSCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CceeCCEEeeeccccccccccchhHHHHHHHHHHHHHHHHhc
Confidence 478999999999876432222235777788888777766544
No 292
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=42.50 E-value=20 Score=32.49 Aligned_cols=35 Identities=23% Similarity=0.424 Sum_probs=25.4
Q ss_pred CCCeeeeecccCCCCCccchhhHHHHHHHHHHHHHHHH
Q 024393 203 VDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVL 240 (268)
Q Consensus 203 ~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i~~~l~ 240 (268)
++||||||+-..+ . +.+.|..+|..|+-.....+.
T Consensus 389 ~~gLf~AGqinGt--~-GyeEAaaqGl~AG~nAa~~~~ 423 (637)
T 2zxi_A 389 IRGLFHAGNFNGT--T-GYEEAAGQGIVAGINAALRAF 423 (637)
T ss_dssp SBTEEECGGGGTB--C-SHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEeeecCCc--c-hHHHHHHHHHHHHHHHHHHhc
Confidence 6899999999877 2 445666788888866654443
No 293
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=42.47 E-value=17 Score=32.04 Aligned_cols=33 Identities=21% Similarity=0.291 Sum_probs=25.7
Q ss_pred CcceeEEEEcCCceEEEEcCCcEEEeCEEEEecChhh
Q 024393 21 GHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGV 57 (268)
Q Consensus 21 ~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~ 57 (268)
+.+|++|+.+ .|.+.+|+++.+|.||+|+-...
T Consensus 352 ~~~I~~it~~----gv~~~dG~~~~~DvIV~ATGf~~ 384 (540)
T 3gwf_A 352 ENPIREVTAK----GVVTEDGVLHELDVLVFATGFDA 384 (540)
T ss_dssp TSCEEEECSS----EEEETTCCEEECSEEEECCCBSC
T ss_pred CCCccEEecC----eEEcCCCCEEECCEEEECCccCc
Confidence 5777777642 36788998999999999997653
No 294
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=41.61 E-value=7.5 Score=34.63 Aligned_cols=37 Identities=22% Similarity=0.319 Sum_probs=27.4
Q ss_pred CCCCCeeeeecccCCCCC------ccchhhHHHHHHHHHHHHH
Q 024393 201 IPVDNLFFAGEATSMSYP------GSVHGAFSTGLMAAEDCRM 237 (268)
Q Consensus 201 ~p~~~l~~aG~~~~~~~~------g~~~gA~~Sg~~aa~~i~~ 237 (268)
+|+++||-||+....-++ .++-.|+..|+.|++.+.+
T Consensus 525 ~~I~GLyAaGe~~~g~~g~~~l~g~sl~~~~vfGr~Ag~~aa~ 567 (572)
T 1d4d_A 525 KPITGLYAAGEVTGGVHGANRLGGNAISDIVTYGRIAGASAAK 567 (572)
T ss_dssp SEEEEEEECSTTEESTTTTSCCTTHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCeeECeecccCCCCCCCCchHhHHHHHHHHHHHHHHHHH
Confidence 789999999997532111 2456689999999988864
No 295
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=41.59 E-value=22 Score=30.45 Aligned_cols=36 Identities=25% Similarity=0.346 Sum_probs=29.2
Q ss_pred hcCCCCCeeeeecccCCCCCccchhhHHHHHHHHHHHH
Q 024393 199 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCR 236 (268)
Q Consensus 199 ~~~p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i~ 236 (268)
+++..+++|.+||.... +.....|...|..+|+.|.
T Consensus 293 ~~t~~~~Iya~GD~~~~--~~~~~~A~~~g~~aa~~i~ 328 (458)
T 1lvl_A 293 CQTSMHNVWAIGDVAGE--PMLAHRAMAQGEMVAEIIA 328 (458)
T ss_dssp CBCSSTTEEECGGGGCS--SCCHHHHHHHHHHHHHHHT
T ss_pred CcCCCCCEEEeeccCCC--cccHHHHHHHHHHHHHHhc
Confidence 45567899999999875 3467789999999999986
No 296
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=40.48 E-value=32 Score=30.70 Aligned_cols=39 Identities=8% Similarity=-0.023 Sum_probs=28.4
Q ss_pred CCCCeeeeecccCCCCCc--cchhhHHHHHHHHHHHHHHHH
Q 024393 202 PVDNLFFAGEATSMSYPG--SVHGAFSTGLMAAEDCRMRVL 240 (268)
Q Consensus 202 p~~~l~~aG~~~~~~~~g--~~~gA~~Sg~~aa~~i~~~l~ 240 (268)
.++||+.+..++.|..++ ..-.++.-|.++|+.|+++..
T Consensus 540 Gv~~LrVvDaSv~P~~~~~n~~~t~~aiaeraAd~I~~~~~ 580 (583)
T 3qvp_A 540 GVQGLRVIDGSIPPTQMSSHVMTVFYAMALKISDAILEDYA 580 (583)
T ss_dssp TCBSEEECSTTCCSSCCSSCSHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCeEEeecccCCCCCCcCcHHHHHHHHHHHHHHHHHhhh
Confidence 468999999999984332 334466778888888887654
No 297
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=40.21 E-value=34 Score=32.65 Aligned_cols=42 Identities=24% Similarity=0.328 Sum_probs=30.7
Q ss_pred cCCceeeCcceeEEEEc-CCce-EEEEcC-------C--cEEEeCEEEEecCh
Q 024393 14 KGLDIRLGHRVTKITRH-YIGV-KVTVEG-------G--KTFVADAVVVAVPL 55 (268)
Q Consensus 14 ~~l~i~~~~~V~~I~~~-~~~v-~v~~~~-------g--~~~~ad~VI~a~p~ 55 (268)
.+++|++++.|.+|..+ ++++ .|++.+ | +++.+|.||+++..
T Consensus 329 ~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~ 381 (965)
T 2gag_A 329 DGVQVISGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEADVLAVAGGF 381 (965)
T ss_dssp TTCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECCE
T ss_pred CCeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCCc
Confidence 47899999999999874 4443 243332 4 67899999999853
No 298
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=40.06 E-value=17 Score=32.06 Aligned_cols=40 Identities=30% Similarity=0.385 Sum_probs=28.9
Q ss_pred cCCCCCeeeeecccCCC-C------CccchhhHHHHHHHHHHHHHHH
Q 024393 200 RIPVDNLFFAGEATSMS-Y------PGSVHGAFSTGLMAAEDCRMRV 239 (268)
Q Consensus 200 ~~p~~~l~~aG~~~~~~-~------~g~~~gA~~Sg~~aa~~i~~~l 239 (268)
++++++||-||+....+ + +.++-.|+..|+.|++.+.+.+
T Consensus 364 ~t~I~GLyAaGE~a~~g~hGanrl~gnsl~~~~vfG~~Ag~~aa~~~ 410 (540)
T 1chu_A 364 RTDVEGLYAIGEVSYTGLHGANRMASNSLLECLVYGWSAAEDITRRM 410 (540)
T ss_dssp BCSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCccCCEEeccccccccccCCCcCcchhHHHHHHHHHHHHHHHHHhc
Confidence 47899999999976321 1 1245568889999999986543
No 299
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=39.86 E-value=34 Score=30.18 Aligned_cols=36 Identities=8% Similarity=0.199 Sum_probs=26.9
Q ss_pred ceee--CcceeEEEEcCCceEEEEcCCcEEEeCEEEEecChhh
Q 024393 17 DIRL--GHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGV 57 (268)
Q Consensus 17 ~i~~--~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~ 57 (268)
+++. +.+|++|+.+ .|.+.+| ++.+|.||+|+-...
T Consensus 354 ~lv~~~~~~I~~it~~----gv~~~dG-~~~~D~IV~ATGf~~ 391 (545)
T 3uox_A 354 HLVDIREAPIQEVTPE----GIKTADA-AYDLDVIIYATGFDA 391 (545)
T ss_dssp EEEETTTSCEEEEETT----EEEESSC-EEECSEEEECCCCBS
T ss_pred EEEecCCCCceEEccC----eEEeCCC-eeecCEEEECCcccc
Confidence 4443 6788887632 3667888 999999999998764
No 300
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=39.84 E-value=12 Score=33.34 Aligned_cols=38 Identities=21% Similarity=0.242 Sum_probs=27.7
Q ss_pred CCCCCeeeeecccCCCCC------ccchhhHHHHHHHHHHHHHH
Q 024393 201 IPVDNLFFAGEATSMSYP------GSVHGAFSTGLMAAEDCRMR 238 (268)
Q Consensus 201 ~p~~~l~~aG~~~~~~~~------g~~~gA~~Sg~~aa~~i~~~ 238 (268)
+|+++||-||+....-++ .++-.|+..|+.|++.+...
T Consensus 524 ~~I~GLyAaGe~~~g~~g~~~l~g~sl~~~~~fGr~Ag~~aa~~ 567 (571)
T 1y0p_A 524 QVIPGLYGAGEVTGGVHGANRLGGNAISDIITFGRLAGEEAAKY 567 (571)
T ss_dssp CEEEEEEECSTTEESSSTTSCCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcCCcEeceEcCCCCcCCCCCchHhHHHHHHHHHHHHHHHHHH
Confidence 689999999987542221 24555889999999888654
No 301
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=39.79 E-value=30 Score=30.11 Aligned_cols=42 Identities=26% Similarity=0.324 Sum_probs=30.8
Q ss_pred CCceeeCcceeEEEEcCCceE-EEE--cCC-cEEEeCEEEEecChh
Q 024393 15 GLDIRLGHRVTKITRHYIGVK-VTV--EGG-KTFVADAVVVAVPLG 56 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~~v~-v~~--~~g-~~~~ad~VI~a~p~~ 56 (268)
.+.|.+++.|.+|..+++++. |.. .++ .++.++.||+++-.=
T Consensus 225 nl~v~~~~~v~~i~~~~~~a~gv~~~~~~~~~~~~a~~VILsAGai 270 (526)
T 3t37_A 225 NLTILTGSRVRRLKLEGNQVRSLEVVGRQGSAEVFADQIVLCAGAL 270 (526)
T ss_dssp TEEEECSCEEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECSHHH
T ss_pred CeEEEeCCEEEEEEecCCeEEEEEEEecCceEEEeecceEEccccc
Confidence 467999999999999988744 333 333 456789999988543
No 302
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=39.18 E-value=21 Score=29.71 Aligned_cols=36 Identities=17% Similarity=0.157 Sum_probs=29.1
Q ss_pred CCeeeeecccCC---CCCccchhhHHHHHHHHHHHHHHH
Q 024393 204 DNLFFAGEATSM---SYPGSVHGAFSTGLMAAEDCRMRV 239 (268)
Q Consensus 204 ~~l~~aG~~~~~---~~~g~~~gA~~Sg~~aa~~i~~~l 239 (268)
+++.++||..+. ..+.+++-|+++|..+|+.|...+
T Consensus 286 ~rv~lvGDAAh~~~P~~GqG~~~al~da~~La~~L~~~~ 324 (399)
T 2x3n_A 286 DNVAMLGDAIHNVHPITGQGMNLAIEDASALADALDLAL 324 (399)
T ss_dssp TTEEECGGGTEECCGGGCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEechhccCCCcccccHHHHHHHHHHHHHHHHhhh
Confidence 799999999764 234589999999999999987643
No 303
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=38.04 E-value=36 Score=29.94 Aligned_cols=42 Identities=19% Similarity=0.147 Sum_probs=29.8
Q ss_pred CCceeeCcceeEEEEcCC---ceE-EEEc--CCc--EE---EeCEEEEecChh
Q 024393 15 GLDIRLGHRVTKITRHYI---GVK-VTVE--GGK--TF---VADAVVVAVPLG 56 (268)
Q Consensus 15 ~l~i~~~~~V~~I~~~~~---~v~-v~~~--~g~--~~---~ad~VI~a~p~~ 56 (268)
+++|++++.|++|..+++ ++. |.+. +|+ ++ .++.||+|+-.-
T Consensus 208 ~~~v~~~~~v~~i~~~~~~~~~~~GV~~~~~~g~~~~~~v~a~k~VILaaGa~ 260 (536)
T 1ju2_A 208 NLRVGVHASVEKIIFSNAPGLTATGVIYRDSNGTPHQAFVRSKGEVIVSAGTI 260 (536)
T ss_dssp TEEEEESCEEEEEEECCSSSCBEEEEEEECTTSCEEEEEEEEEEEEEECCHHH
T ss_pred CcEEEeCCEEEEEEECCCCCCEEEEEEEEeCCCceEEEEeccCCEEEEcCccc
Confidence 457999999999998763 433 5553 564 34 468899998653
No 304
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=36.58 E-value=39 Score=30.10 Aligned_cols=37 Identities=14% Similarity=0.175 Sum_probs=27.0
Q ss_pred CCCCeeeeecccCCCCCc--cchhhHHHHHHHHHHHHHH
Q 024393 202 PVDNLFFAGEATSMSYPG--SVHGAFSTGLMAAEDCRMR 238 (268)
Q Consensus 202 p~~~l~~aG~~~~~~~~g--~~~gA~~Sg~~aa~~i~~~ 238 (268)
.++||+.+..++.|..++ ..-.++.-|.++|+.|+++
T Consensus 534 Gv~~LrVvDaSv~P~~~~~n~~a~~~~iaekaAd~I~~~ 572 (577)
T 3q9t_A 534 GIKKLRVADASVIPIIPDCRIQNSVYAVGEKCADMIKAE 572 (577)
T ss_dssp TCBSEEECSGGGCSSCCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcEEeecccccCCCCCccHHHHHHHHHHHHHHHHhh
Confidence 468999999999984332 3444667788888888764
No 305
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=35.26 E-value=33 Score=29.91 Aligned_cols=39 Identities=18% Similarity=0.281 Sum_probs=31.5
Q ss_pred hcC-CCCCeeeeecccCCCCCccchhhHHHHHHHHHHHHH
Q 024393 199 LRI-PVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 237 (268)
Q Consensus 199 ~~~-p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i~~ 237 (268)
++. ..+|+|-+||....+.+..-.-|...|..+|+.|..
T Consensus 359 lq~~~~~~IfAiGD~a~~~~p~~a~~A~qqg~~~A~ni~~ 398 (502)
T 4g6h_A 359 LQVKGSNNIFAIGDNAFAGLPPTAQVAHQEAEYLAKNFDK 398 (502)
T ss_dssp SBBTTCSSEEECGGGEESSSCCCHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCCEEEEEcccCCCCCCchHHHHHHHHHHHHHHHH
Confidence 444 368999999987665567888899999999999864
No 306
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=35.19 E-value=24 Score=29.49 Aligned_cols=33 Identities=12% Similarity=0.129 Sum_probs=27.2
Q ss_pred CCeeeeecccCCC---CCccchhhHHHHHHHHHHHH
Q 024393 204 DNLFFAGEATSMS---YPGSVHGAFSTGLMAAEDCR 236 (268)
Q Consensus 204 ~~l~~aG~~~~~~---~~g~~~gA~~Sg~~aa~~i~ 236 (268)
+++.++||..+.. .+.+++.|+++|..+++.|.
T Consensus 301 ~rv~LvGDAAh~~~P~~GqG~~~al~da~~La~~L~ 336 (407)
T 3rp8_A 301 GRVALLGDAGHSTTPDIGQGGCAAMEDAVVLGAVFR 336 (407)
T ss_dssp TTEEECGGGTCCCCGGGSCHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEcccccCCcchhhhHHHHHHHHHHHHHHHh
Confidence 6899999998752 34589999999999998875
No 307
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=34.37 E-value=42 Score=28.79 Aligned_cols=43 Identities=16% Similarity=0.160 Sum_probs=29.3
Q ss_pred cCCceeeCcceeEEEEcCC--ceEEEE--------------cCC--cEEEeCEEEEecChh
Q 024393 14 KGLDIRLGHRVTKITRHYI--GVKVTV--------------EGG--KTFVADAVVVAVPLG 56 (268)
Q Consensus 14 ~~l~i~~~~~V~~I~~~~~--~v~v~~--------------~~g--~~~~ad~VI~a~p~~ 56 (268)
++++|++++.+.+|..++. ++.+.. .+| +++.||.||+++...
T Consensus 265 ~gv~i~~~~~~~~i~~~~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~ 325 (456)
T 1lqt_A 265 RRMVFRFLTSPIEIKGKRKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYR 325 (456)
T ss_dssp EEEEEECSEEEEEEECSSSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSCEE
T ss_pred ceEEEEeCCCCeEEecCCcEeEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEccccc
Confidence 3578999999999986532 133321 134 468899999998753
No 308
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=33.42 E-value=36 Score=28.11 Aligned_cols=34 Identities=12% Similarity=0.071 Sum_probs=27.4
Q ss_pred CCeeeeecccCCC---CCccchhhHHHHHHHHHHHHH
Q 024393 204 DNLFFAGEATSMS---YPGSVHGAFSTGLMAAEDCRM 237 (268)
Q Consensus 204 ~~l~~aG~~~~~~---~~g~~~gA~~Sg~~aa~~i~~ 237 (268)
+++.++||..+.. .+.+++-|+++|..+|+.|..
T Consensus 262 grv~LvGDAAh~~~P~~GqG~~~al~Da~~La~~L~~ 298 (381)
T 3c4a_A 262 GKLVLLGDALQSGHFSIGHGTTMAVVVAQLLVKALCT 298 (381)
T ss_dssp TTEEECGGGTCCCCGGGCCHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEccccccCCCccccHHHHHHHHHHHHHHHhc
Confidence 6899999998753 235889999999999988753
No 309
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=33.02 E-value=24 Score=32.12 Aligned_cols=35 Identities=23% Similarity=0.190 Sum_probs=28.9
Q ss_pred CCCCCeeeeecccCCCCCccchhhHHHHHHHHHHHHHH
Q 024393 201 IPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMR 238 (268)
Q Consensus 201 ~p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i~~~ 238 (268)
+..+++|.+||...+ +.+..|+..|..||..|...
T Consensus 639 t~~~~VyaiGD~~~~---~~~~~A~~~g~~aa~~i~~~ 673 (690)
T 3k30_A 639 GEIASVRGIGDAWAP---GTIAAAVWSGRRAAEEFDAV 673 (690)
T ss_dssp TSCSEEEECGGGTSC---BCHHHHHHHHHHHHHHTTCC
T ss_pred cCCCCEEEEeCCCch---hhHHHHHHHHHHHHHHHHhh
Confidence 457899999999976 35667999999999999654
No 310
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=32.81 E-value=38 Score=27.93 Aligned_cols=35 Identities=11% Similarity=0.143 Sum_probs=27.3
Q ss_pred CCCeeeeecccCC---CCCccchhhHHHHHHHHHHHHH
Q 024393 203 VDNLFFAGEATSM---SYPGSVHGAFSTGLMAAEDCRM 237 (268)
Q Consensus 203 ~~~l~~aG~~~~~---~~~g~~~gA~~Sg~~aa~~i~~ 237 (268)
.++++++||..|. ..+.+++.|++.|...|..|..
T Consensus 310 ~grv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~ 347 (412)
T 4hb9_A 310 SSTVTLLGDAIHNMTPMTGSGANTALRDALLLTQKLAS 347 (412)
T ss_dssp CCSEEECTHHHHCSSCCSSSHHHHHHHHHHHHHHHHHH
T ss_pred ccCEEEEEcccccCCCchhhHHHHHHHHHHHHHHHHHH
Confidence 3689999999654 2345899999999888888754
No 311
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=32.52 E-value=90 Score=29.97 Aligned_cols=42 Identities=17% Similarity=0.032 Sum_probs=30.0
Q ss_pred hcCCceeeCcceeEEEEcCCceE-EEEc------CC---------cEEEeCEEEEecC
Q 024393 13 AKGLDIRLGHRVTKITRHYIGVK-VTVE------GG---------KTFVADAVVVAVP 54 (268)
Q Consensus 13 ~~~l~i~~~~~V~~I~~~~~~v~-v~~~------~g---------~~~~ad~VI~a~p 54 (268)
.++++|++++.+.+|..+++++. |++. +| +++.+|.||+++.
T Consensus 382 ~~Gv~~~~~~~~~~i~~~~g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G 439 (1025)
T 1gte_A 382 EEKCEFLPFLSPRKVIVKGGRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFG 439 (1025)
T ss_dssp HTTCEEECSEEEEEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSC
T ss_pred HcCCEEEeCCCceEEEccCCeEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCC
Confidence 45788999999999987666543 3321 22 3688999999884
No 312
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=32.44 E-value=28 Score=28.95 Aligned_cols=33 Identities=15% Similarity=0.093 Sum_probs=26.2
Q ss_pred CCeeeeecccCCC---CCccchhhHHHHHHHHHHHH
Q 024393 204 DNLFFAGEATSMS---YPGSVHGAFSTGLMAAEDCR 236 (268)
Q Consensus 204 ~~l~~aG~~~~~~---~~g~~~gA~~Sg~~aa~~i~ 236 (268)
+++.++||..|.. .+.+++.|++.|...|+.|.
T Consensus 299 grv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~ 334 (397)
T 2vou_A 299 GRVLLIGDAAVTPRPHAAAGGAKASDDARTLAEVFT 334 (397)
T ss_dssp TTEEECGGGTSBCCGGGSCHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEeccccccCCcchhhHHHHHHHHHHHHHHHh
Confidence 6899999998752 23588889999988887764
No 313
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=31.47 E-value=40 Score=28.97 Aligned_cols=42 Identities=7% Similarity=0.134 Sum_probs=29.5
Q ss_pred cCCceeeCcceeEEEEcC-C-ceE-EEEc---------------CC--cEEEeCEEEEecCh
Q 024393 14 KGLDIRLGHRVTKITRHY-I-GVK-VTVE---------------GG--KTFVADAVVVAVPL 55 (268)
Q Consensus 14 ~~l~i~~~~~V~~I~~~~-~-~v~-v~~~---------------~g--~~~~ad~VI~a~p~ 55 (268)
++++|++++.+.+|..++ + ++. |++. +| +++.+|.||+++..
T Consensus 270 ~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~ 331 (460)
T 1cjc_A 270 RAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGY 331 (460)
T ss_dssp EEEEEECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCE
T ss_pred ceEEEECCCChheEEcCCCCceEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCC
Confidence 457899999999998763 4 332 3321 34 57889999998864
No 314
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=31.12 E-value=43 Score=29.08 Aligned_cols=36 Identities=8% Similarity=0.103 Sum_probs=27.6
Q ss_pred CCeeeeecccCC---CCCccchhhHHHHHHHHHHHHHHH
Q 024393 204 DNLFFAGEATSM---SYPGSVHGAFSTGLMAAEDCRMRV 239 (268)
Q Consensus 204 ~~l~~aG~~~~~---~~~g~~~gA~~Sg~~aa~~i~~~l 239 (268)
++++++||..|. ..+.+++.+++.|...+..|...+
T Consensus 278 grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~l 316 (499)
T 2qa2_A 278 GRVLLAGDSAHVHLPAGGQGMNVSVQDSVNLGWKLAAVV 316 (499)
T ss_dssp TTEEECGGGTEEECCCSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEecccccCCCccccchhhhHHHHHHHHHHHHHHH
Confidence 689999999763 234589999999988887776544
No 315
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=30.78 E-value=38 Score=28.27 Aligned_cols=34 Identities=15% Similarity=0.170 Sum_probs=27.0
Q ss_pred CCeeeeecccCC---CCCccchhhHHHHHHHHHHHHH
Q 024393 204 DNLFFAGEATSM---SYPGSVHGAFSTGLMAAEDCRM 237 (268)
Q Consensus 204 ~~l~~aG~~~~~---~~~g~~~gA~~Sg~~aa~~i~~ 237 (268)
+++.++||..+. ..+.+++.|++.|...|+.|..
T Consensus 303 grv~LvGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~ 339 (410)
T 3c96_A 303 GRITLLGDAAHLMYPMGANGASQAILDGIELAAALAR 339 (410)
T ss_dssp TTEEECTHHHHCCCSSTTCTHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEecccCCCCCccchhHHHHHHHHHHHHHHHhc
Confidence 689999999654 2345899999999999888753
No 316
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=29.89 E-value=41 Score=30.11 Aligned_cols=41 Identities=24% Similarity=0.298 Sum_probs=29.1
Q ss_pred hcCCCCCeeeeecccCC-CCC------ccchhhHHHHHHHHHHHHHHH
Q 024393 199 LRIPVDNLFFAGEATSM-SYP------GSVHGAFSTGLMAAEDCRMRV 239 (268)
Q Consensus 199 ~~~p~~~l~~aG~~~~~-~~~------g~~~gA~~Sg~~aa~~i~~~l 239 (268)
.++++++||-||+.... -++ .++-.|+..|+.|++.+...+
T Consensus 368 ~~~~IpGLyAaGe~a~~g~hGanrl~gnsl~~~~vfGr~Ag~~aa~~~ 415 (602)
T 1kf6_A 368 CETRIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRLAGEQATERA 415 (602)
T ss_dssp SBCSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccccCCEEEccccccccccCCCCCccHHHHHHHHHHHHHHHHHHHhh
Confidence 35589999999997532 111 135668889999999887654
No 317
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=29.87 E-value=31 Score=30.04 Aligned_cols=37 Identities=30% Similarity=0.285 Sum_probs=26.4
Q ss_pred cCCCCCeeeeecccCCC----CC--ccchhhHHHHHHHHHHHH
Q 024393 200 RIPVDNLFFAGEATSMS----YP--GSVHGAFSTGLMAAEDCR 236 (268)
Q Consensus 200 ~~p~~~l~~aG~~~~~~----~~--g~~~gA~~Sg~~aa~~i~ 236 (268)
.+|+++||-||+.+..- +. .++-.|+.+|+.|++.+.
T Consensus 465 g~~I~GLyAaGe~~gg~~g~~y~~G~sl~~~~~fGr~Ag~~aa 507 (510)
T 4at0_A 465 GEPIPGLFAAGRCTSGVCAGGYASGTSLGDGSFYGRRAGISAA 507 (510)
T ss_dssp SSEEEEEEECGGGBCCSCSSSCCTTHHHHHHHHHHHHHHHHHH
T ss_pred CCCcCCeeeceecccCCCcCCCCcHHhHHHHHHHHHHHHHHHH
Confidence 36899999999976421 11 135568899999988764
No 318
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=29.48 E-value=46 Score=29.67 Aligned_cols=39 Identities=8% Similarity=-0.053 Sum_probs=28.4
Q ss_pred CCCCeeeeecccCCCCCc--cchhhHHHHHHHHHHHHHHHH
Q 024393 202 PVDNLFFAGEATSMSYPG--SVHGAFSTGLMAAEDCRMRVL 240 (268)
Q Consensus 202 p~~~l~~aG~~~~~~~~g--~~~gA~~Sg~~aa~~i~~~l~ 240 (268)
.++||+.++.++.|..++ ..-.++.-|.++|+.|+++++
T Consensus 544 Gv~nLrVvDaSv~P~~~~~Np~~ti~aiAeraAd~I~~~~~ 584 (587)
T 1gpe_A 544 GTQGLRVIDGSIPPTQVSSHVMTIFYGMALKVADAILDDYA 584 (587)
T ss_dssp TCBSEEECSTTCCSSCCSSCSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcEEeeeccCCCCCCcchHHHHHHHHHHHHHHHHhhhh
Confidence 468999999999984332 344466778888888887654
No 319
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=29.23 E-value=41 Score=28.56 Aligned_cols=37 Identities=19% Similarity=0.209 Sum_probs=25.7
Q ss_pred eeeCcceeEEEEcCCceEEEEcCCcE-EEeCEEEEecChh
Q 024393 18 IRLGHRVTKITRHYIGVKVTVEGGKT-FVADAVVVAVPLG 56 (268)
Q Consensus 18 i~~~~~V~~I~~~~~~v~v~~~~g~~-~~ad~VI~a~p~~ 56 (268)
|.++..|+++..+++ .|.+.+|++ +.+|.||+++-..
T Consensus 254 i~~~~~v~~~~~~~~--~v~~~dG~~~~~~D~vi~atG~~ 291 (447)
T 2gv8_A 254 LQQVPEITKFDPTTR--EIYLKGGKVLSNIDRVIYCTGYL 291 (447)
T ss_dssp EEEECCEEEEETTTT--EEEETTTEEECCCSEEEECCCBC
T ss_pred eEEecCeEEEecCCC--EEEECCCCEeccCCEEEECCCCC
Confidence 556667777764333 466678866 6899999998653
No 320
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=29.16 E-value=45 Score=28.89 Aligned_cols=39 Identities=18% Similarity=0.247 Sum_probs=28.9
Q ss_pred hcCCCCCeeeeecccCC--------------------------------CCCccchhhHHHHHHHHHHHHH
Q 024393 199 LRIPVDNLFFAGEATSM--------------------------------SYPGSVHGAFSTGLMAAEDCRM 237 (268)
Q Consensus 199 ~~~p~~~l~~aG~~~~~--------------------------------~~~g~~~gA~~Sg~~aa~~i~~ 237 (268)
+++..++||.+||.... +......-|...|+.+|+.|..
T Consensus 300 ~~t~~~~iya~GD~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g 370 (500)
T 1onf_A 300 QRTSVNNIYAVGDCCMVKKSKEIEDLNLLKLYNEERYLNKKENVTEDIFYNVQLTPVAINAGRLLADRLFL 370 (500)
T ss_dssp CBCSSSSEEECSTTEEEC------------------------------CBCCCCHHHHHHHHHHHHHHHHS
T ss_pred cccCCCCEEEEeccccccccccccccccccccccccccccccccccccCCcccchhHHHHHHHHHHHHHhC
Confidence 45567899999998820 1234567799999999999863
No 321
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=28.70 E-value=51 Score=27.18 Aligned_cols=36 Identities=19% Similarity=0.059 Sum_probs=29.0
Q ss_pred CCeeeeecccCCC---CCccchhhHHHHHHHHHHHHHHH
Q 024393 204 DNLFFAGEATSMS---YPGSVHGAFSTGLMAAEDCRMRV 239 (268)
Q Consensus 204 ~~l~~aG~~~~~~---~~g~~~gA~~Sg~~aa~~i~~~l 239 (268)
+++.++||..|.. .+.+++-|++.|...|+.|...+
T Consensus 279 grv~LvGDAAh~~~P~~GqG~~~ai~da~~La~~L~~~~ 317 (394)
T 1k0i_A 279 GRLFLAGDAAHIVPPTGAKGLNLAASDVSTLYRLLLKAY 317 (394)
T ss_dssp TTEEECGGGTEECCGGGTCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEechhhcCCCcccchHHHHHHHHHHHHHHHHHHh
Confidence 6899999997642 34589999999999999987654
No 322
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=28.59 E-value=59 Score=29.55 Aligned_cols=44 Identities=14% Similarity=0.166 Sum_probs=30.6
Q ss_pred hcCCCCCeeeeecccCCCCCccchhhHHHHHHHHHHHHHHHHHH
Q 024393 199 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLER 242 (268)
Q Consensus 199 ~~~p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i~~~l~~~ 242 (268)
..+.+++||-||+....+.-|....++..|+.++..+.+.++..
T Consensus 448 ~~t~v~gl~a~Ge~~~~~~hg~~~~sl~~g~~ag~~a~~~~~~~ 491 (662)
T 3gyx_A 448 RMTTVEGLWTCADGVGASGHKFSSGSHAEGRIVGKQMVRWYLDH 491 (662)
T ss_dssp TBCSSBTEECCSSSBCSCCCCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCccCCeEeCccccccccCccHhHHHHHHHHHHHHHHHHHhhC
Confidence 46789999999998743222334556777888888777766654
No 323
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=28.28 E-value=37 Score=29.88 Aligned_cols=37 Identities=8% Similarity=0.084 Sum_probs=28.3
Q ss_pred CCCeeeeecccCC--C-CCccchhhHHHHHHHHHHHHHHH
Q 024393 203 VDNLFFAGEATSM--S-YPGSVHGAFSTGLMAAEDCRMRV 239 (268)
Q Consensus 203 ~~~l~~aG~~~~~--~-~~g~~~gA~~Sg~~aa~~i~~~l 239 (268)
.++++++||..|. . .+.+++.+++.|...+..|...+
T Consensus 308 ~grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~l 347 (549)
T 2r0c_A 308 AGRVFLTGDAAHTLSPSGGFGMNTGIGSAADLGWKLAATL 347 (549)
T ss_dssp ETTEEECGGGTEECCCGGGHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEccccccCCCccCCccccccHHHHHHHHHHHHHH
Confidence 3689999999764 2 23488889999988888876544
No 324
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=28.01 E-value=28 Score=31.96 Aligned_cols=35 Identities=17% Similarity=0.234 Sum_probs=28.4
Q ss_pred CCCCCeeeeecccCCCCCccchhhHHHHHHHHHHHHHH
Q 024393 201 IPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMR 238 (268)
Q Consensus 201 ~p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i~~~ 238 (268)
+..++||.+||...+ ..+..|+..|..||..|...
T Consensus 664 t~~~~VyAiGD~~~~---~~~~~A~~~G~~aA~~i~~~ 698 (729)
T 1o94_A 664 NDIKGIYLIGDAEAP---RLIADATFTGHRVAREIEEA 698 (729)
T ss_dssp GTCCEEEECGGGTSC---CCHHHHHHHHHHHHHTTTSS
T ss_pred cCCCCeEEEeCccch---hhHHHHHHHHHHHHHHhhhh
Confidence 456899999998865 35677999999999999643
No 325
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=27.33 E-value=40 Score=30.37 Aligned_cols=37 Identities=11% Similarity=0.116 Sum_probs=28.3
Q ss_pred CCCeeeeecccCCC---CCccchhhHHHHHHHHHHHHHHH
Q 024393 203 VDNLFFAGEATSMS---YPGSVHGAFSTGLMAAEDCRMRV 239 (268)
Q Consensus 203 ~~~l~~aG~~~~~~---~~g~~~gA~~Sg~~aa~~i~~~l 239 (268)
.++++++||..|.. .+.+++.|++.|...+..|..-+
T Consensus 341 ~gRV~L~GDAAH~~~P~~GqG~n~ai~DA~nLawkLa~vl 380 (639)
T 2dkh_A 341 LPRVFIAGDACHTHSPKAGQGMNFSMQDSFNLGWKLAAVL 380 (639)
T ss_dssp CCCEEECGGGTEECCGGGCCTTHHHHHHHHHHHHHHHHHH
T ss_pred cCcEEEEecccccCCCcccccchhhHHHHHHHHHHHHHHH
Confidence 57999999997642 23589999999988887775543
No 326
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=26.92 E-value=51 Score=31.48 Aligned_cols=37 Identities=24% Similarity=0.182 Sum_probs=29.6
Q ss_pred CCCCCeeeeecccCCCCCccchhhHHHHHHHHHHHHHHHH
Q 024393 201 IPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVL 240 (268)
Q Consensus 201 ~p~~~l~~aG~~~~~~~~g~~~gA~~Sg~~aa~~i~~~l~ 240 (268)
+..++||.+||.... . .+..|+..|..||..|...+.
T Consensus 408 ts~p~IyAaGD~a~~--~-~l~~A~~~G~~aA~~i~~~lg 444 (965)
T 2gag_A 408 DAVANQHLAGAMTGR--L-DTASALSTGAATGAAAATAAG 444 (965)
T ss_dssp SCCTTEEECGGGGTC--C-SHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCCEEEEEecCCc--h-hHHHHHHHHHHHHHHHHHHcC
Confidence 456899999999865 2 355899999999999987653
No 327
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=25.99 E-value=47 Score=27.58 Aligned_cols=32 Identities=13% Similarity=0.256 Sum_probs=26.2
Q ss_pred CeeeeecccCC---CCCccchhhHHHHHHHHHHHH
Q 024393 205 NLFFAGEATSM---SYPGSVHGAFSTGLMAAEDCR 236 (268)
Q Consensus 205 ~l~~aG~~~~~---~~~g~~~gA~~Sg~~aa~~i~ 236 (268)
++.++||..+. ..+.+++.|++.|...|+.|.
T Consensus 315 rv~LiGDAAh~~~P~~GqG~n~ai~Da~~La~~L~ 349 (398)
T 2xdo_A 315 PITMIGDAAHLMPPFAGQGVNSGLVDALILSDNLA 349 (398)
T ss_dssp CEEECTHHHHCCCCTTSCSHHHHHHHHHHHHHHHH
T ss_pred cEEEEeehhccCCCccCccHHHHHHHHHHHHHHHH
Confidence 89999999753 234589999999999998874
No 328
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=25.14 E-value=59 Score=29.47 Aligned_cols=16 Identities=6% Similarity=-0.029 Sum_probs=14.5
Q ss_pred CceeeCcceeEEEEcC
Q 024393 16 LDIRLGHRVTKITRHY 31 (268)
Q Consensus 16 l~i~~~~~V~~I~~~~ 31 (268)
++|++++.|++++.++
T Consensus 137 v~v~~g~~v~~~~~d~ 152 (665)
T 1pn0_A 137 IKVERPLIPEKMEIDS 152 (665)
T ss_dssp SCEECSEEEEEEEECG
T ss_pred eEEEeCCEEEEEEecC
Confidence 7899999999999875
No 329
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=25.06 E-value=55 Score=29.10 Aligned_cols=36 Identities=17% Similarity=0.116 Sum_probs=25.7
Q ss_pred CCCCeeeeecccCCCCCc--cchhhHHHHHHHHHHHHH
Q 024393 202 PVDNLFFAGEATSMSYPG--SVHGAFSTGLMAAEDCRM 237 (268)
Q Consensus 202 p~~~l~~aG~~~~~~~~g--~~~gA~~Sg~~aa~~i~~ 237 (268)
.++||+.+..++.|..++ ..-.++.-|.+||+.|++
T Consensus 527 Gv~~LrVvDaSv~P~~~~~n~~~~~~~iaekaAd~I~~ 564 (566)
T 3fim_B 527 GVDGLRIVDGSILPFAPNAHTQGPIYLVGKQGADLIKA 564 (566)
T ss_dssp TCBSEEECSGGGCCSCCSSCTHHHHHHHHHHHHHHHHH
T ss_pred cCCCcEEcccccCCCCCCcCcHHHHHHHHHHHHHHHhh
Confidence 468999999999984332 333456677788887764
No 330
>1qey_A MNT-C, protein (regulatory protein MNT); oligomerization, transcriptional control, P22 MNT repressor, gene regulation; NMR {Enterobacteria phage P22} SCOP: h.2.1.1
Probab=24.80 E-value=46 Score=16.54 Aligned_cols=24 Identities=21% Similarity=0.371 Sum_probs=15.9
Q ss_pred HHHHhcCCHHHHHHHHHHHHHHhc
Q 024393 137 ARDIEKMSDEAAANFAFTQLKKIL 160 (268)
Q Consensus 137 ~~~~~~~~~~e~~~~i~~~l~~~~ 160 (268)
+..+.+.-.+.+++.+.+.|++++
T Consensus 4 aER~Ad~qse~vKk~vfdtLk~~Y 27 (31)
T 1qey_A 4 AERLADEQSELVKKMVFDTLKDLY 27 (31)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344444445677888888888765
No 331
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=24.46 E-value=75 Score=28.81 Aligned_cols=41 Identities=27% Similarity=0.293 Sum_probs=28.6
Q ss_pred cCCCCCeeeeecccCC-CCC------ccchhhHHHHHHHHHHHHHHHH
Q 024393 200 RIPVDNLFFAGEATSM-SYP------GSVHGAFSTGLMAAEDCRMRVL 240 (268)
Q Consensus 200 ~~p~~~l~~aG~~~~~-~~~------g~~~gA~~Sg~~aa~~i~~~l~ 240 (268)
++++++||-||+.... -++ .++-.|+..|+.|++.+.+.+.
T Consensus 382 ~v~IpGLYAaGE~a~~g~hGanrlggnsL~~~~vfGr~Ag~~aa~~~~ 429 (660)
T 2bs2_A 382 EAKLKGLFSAGEAACWDMHGFNRLGGNSVSEAVVAGMIVGEYFAEHCA 429 (660)
T ss_dssp BCSSBTEEECGGGEECCSSTTCCCTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceecCCEEeccccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHhh
Confidence 4589999999995321 111 2455688899999988876553
No 332
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=24.20 E-value=75 Score=27.20 Aligned_cols=44 Identities=20% Similarity=0.182 Sum_probs=29.3
Q ss_pred HHhcCCceeeCcceeEEEEcCCce---EEE-------Ec---------CC--cEEEeCEEEEecCh
Q 024393 11 TLAKGLDIRLGHRVTKITRHYIGV---KVT-------VE---------GG--KTFVADAVVVAVPL 55 (268)
Q Consensus 11 ~l~~~l~i~~~~~V~~I~~~~~~v---~v~-------~~---------~g--~~~~ad~VI~a~p~ 55 (268)
...+++++++++.+.+|..+ +++ .+. .. +| +++.+|.||+++..
T Consensus 312 ~~~~Gv~~~~~~~~~~i~~~-g~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~ 376 (456)
T 2vdc_G 312 AEEEGVEFIWQAAPEGFTGD-TVVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALGF 376 (456)
T ss_dssp HHHTTCEEECCSSSCCEEEE-EEEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCE
T ss_pred HHHCCCEEEeCCCceEEeCC-CcEEEEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCCC
Confidence 34567899999999998753 332 221 01 23 46889999998874
No 333
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=23.34 E-value=34 Score=28.20 Aligned_cols=33 Identities=12% Similarity=0.216 Sum_probs=26.2
Q ss_pred CCeeeeecccCC---CCCccchhhHHHHHHHHHHHH
Q 024393 204 DNLFFAGEATSM---SYPGSVHGAFSTGLMAAEDCR 236 (268)
Q Consensus 204 ~~l~~aG~~~~~---~~~g~~~gA~~Sg~~aa~~i~ 236 (268)
+++.++||..+. ..+.+++-|+.+|..+|+.|.
T Consensus 281 ~rv~lvGDAAh~~~P~~GqG~~~ai~da~~La~~L~ 316 (379)
T 3alj_A 281 GKVALVGDAAHAMCPALAQGAGCAMVNAFSLSQDLE 316 (379)
T ss_dssp TTEEECTHHHHCCCGGGSCHHHHHHHHHHHHHHHTT
T ss_pred CcEEEEEcccCCCCcchhhhHHHHHHHHHHHHHHhc
Confidence 689999999764 234589999999998888774
No 334
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=22.76 E-value=71 Score=25.04 Aligned_cols=36 Identities=17% Similarity=0.268 Sum_probs=24.7
Q ss_pred ChHHHHHHHhcCCceeeCcceeEEEEcCCc-----eEEEEcCCcE
Q 024393 4 GYLPVINTLAKGLDIRLGHRVTKITRHYIG-----VKVTVEGGKT 43 (268)
Q Consensus 4 G~~~l~~~l~~~l~i~~~~~V~~I~~~~~~-----v~v~~~~g~~ 43 (268)
||++|+.++.+ .++.+|.+|+.-+++ +.|++.+|+.
T Consensus 1 g~~~v~a~~~~----l~G~~v~~v~~~g~G~~~~vyrv~l~DG~~ 41 (288)
T 3f7w_A 1 GVNSVAARVTE----LTGREVAAVAERGHSHRWHLYRVELADGTP 41 (288)
T ss_dssp CCHHHHHHHHH----HHCCCEEEEEEEEEETTEEEEEEEETTSCE
T ss_pred ChHHHHHHHHH----hcCCCeEEEEecCCCCCeEEEEEEECCCCE
Confidence 78888888876 556677777765432 5677788853
No 335
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=21.76 E-value=65 Score=28.39 Aligned_cols=32 Identities=13% Similarity=0.298 Sum_probs=24.0
Q ss_pred CcceeEEEEcCCceEEEEcCCcEEEeCEEEEecChhh
Q 024393 21 GHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGV 57 (268)
Q Consensus 21 ~~~V~~I~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~ 57 (268)
..+|++|+. + .|.+.+| ++.+|.||+|+-...
T Consensus 365 ~~~I~~it~--~--gv~~~dG-~~~~D~iI~ATGf~~ 396 (549)
T 4ap3_A 365 STPIVGMDE--T--GIVTTGA-HYDLDMIVLATGFDA 396 (549)
T ss_dssp TSCEEEEET--T--EEEESSC-EEECSEEEECCCEEE
T ss_pred CCCceEEeC--C--cEEeCCC-ceecCEEEECCcccc
Confidence 466777663 2 3667788 999999999998754
No 336
>3db7_A Putative calcium-regulated periplasmic protein; structural genomics, joint center for structural genomics; HET: MSE; 1.40A {Bacteroides thetaiotaomicron} SCOP: d.98.2.1 PDB: 3due_A*
Probab=21.63 E-value=1.1e+02 Score=21.01 Aligned_cols=29 Identities=21% Similarity=0.184 Sum_probs=22.6
Q ss_pred eeCcceeEEEEcCCceEEEEcCCcEEEeC
Q 024393 19 RLGHRVTKITRHYIGVKVTVEGGKTFVAD 47 (268)
Q Consensus 19 ~~~~~V~~I~~~~~~v~v~~~~g~~~~ad 47 (268)
.-+..|.+|+++.+...|...+|..+.+|
T Consensus 89 yp~~~I~~ie~~~~~YeV~L~ng~el~Fd 117 (127)
T 3db7_A 89 YPDAKVLKIERDKKDYEVKLSNRTELKFD 117 (127)
T ss_dssp CTTCCEEEEEECSSEEEEEETTSCEEEEE
T ss_pred CCCCeEEEEEEECCEEEEEECCCcEEEEc
Confidence 45788899998888888988888666554
No 337
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=20.32 E-value=46 Score=29.68 Aligned_cols=40 Identities=23% Similarity=0.192 Sum_probs=28.4
Q ss_pred CCCCeeeeecccCC-CCC------ccchhhHHHHHHHHHHHHHHHHH
Q 024393 202 PVDNLFFAGEATSM-SYP------GSVHGAFSTGLMAAEDCRMRVLE 241 (268)
Q Consensus 202 p~~~l~~aG~~~~~-~~~------g~~~gA~~Sg~~aa~~i~~~l~~ 241 (268)
++++||-||+.... -++ .++-.|+..|+.|++.+......
T Consensus 379 ~I~GLyAaGe~a~~g~hG~nrl~gnsl~~~~vfG~~Ag~~aa~~~~~ 425 (588)
T 2wdq_A 379 VVPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGLHLQESIAE 425 (588)
T ss_dssp EEEEEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHTHHHHHHH
T ss_pred eeCCceeCccccccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhc
Confidence 79999999995321 111 24566889999999988766543
Done!