BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024395
(268 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P27489|CB23_SOLLC Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum
lycopersicum GN=CAB13 PE=1 SV=1
Length = 265
Score = 492 bits (1266), Expect = e-138, Method: Compositional matrix adjust.
Identities = 239/268 (89%), Positives = 257/268 (95%), Gaps = 3/268 (1%)
Query: 1 MASIMAAATASSSTSLRATPFLGQSRTTANALKDVVPMGNAKYTMGNELWYGPDRVKYLG 60
MAS+ AATASS+T ++ATPFLGQ++ AN L+DVV MG+A++TM N+LWYGPDRVKYLG
Sbjct: 1 MASM--AATASSTTVVKATPFLGQTKN-ANPLRDVVAMGSARFTMSNDLWYGPDRVKYLG 57
Query: 61 PFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLE 120
PFSAQTPSYL GEFPGDYGWDTAGLSADPEAFA+NRALEVIHGRWAMLGALGCI PEVLE
Sbjct: 58 PFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCIFPEVLE 117
Query: 121 KWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRING 180
KW++VDFKEPVWFKAG+QIFS+GGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRING
Sbjct: 118 KWVKVDFKEPVWFKAGSQIFSDGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRING 177
Query: 181 LPGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240
LPGVGEGNDLYPGGQYFDPLGLADDP TFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 178 LPGVGEGNDLYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 237
Query: 241 PLENLLDHLENPVANNAWVYATKFVPGS 268
PLENLLDHL+NPVANNAWVYATKFVPG+
Sbjct: 238 PLENLLDHLDNPVANNAWVYATKFVPGA 265
>sp|P27523|CB23_HORVU Chlorophyll a-b binding protein of LHCII type III, chloroplastic
OS=Hordeum vulgare GN=LHBC PE=2 SV=1
Length = 268
Score = 459 bits (1180), Expect = e-128, Method: Compositional matrix adjust.
Identities = 226/269 (84%), Positives = 244/269 (90%), Gaps = 5/269 (1%)
Query: 2 ASIMAAATASSSTSLRATPFL-GQSRT-TANALKDVVPMGNAKYTMGNELWYGPDRVKYL 59
++IMAAA S + TPFL GQ R +A+ L+D+ N + TMGN+LWYGPDRVKYL
Sbjct: 3 STIMAAA---SRAVVAKTPFLSGQGRAASASPLRDIAAATNGRITMGNDLWYGPDRVKYL 59
Query: 60 GPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVL 119
GPFSAQTPSYL GEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGC+ PEVL
Sbjct: 60 GPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCVFPEVL 119
Query: 120 EKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRIN 179
+KW+ V+FKEPVWFKAG+QIFSEGGLDYLGNPNLVHAQSILAVLGFQV+LMGLVEGFRIN
Sbjct: 120 QKWVGVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRIN 179
Query: 180 GLPGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 239
GL GVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK
Sbjct: 180 GLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 239
Query: 240 GPLENLLDHLENPVANNAWVYATKFVPGS 268
GPLENL DHL++PVANNAWV+ATKF PGS
Sbjct: 240 GPLENLFDHLDDPVANNAWVFATKFAPGS 268
>sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa
subsp. japonica GN=RCABP89 PE=2 SV=1
Length = 263
Score = 359 bits (921), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 189/271 (69%), Positives = 208/271 (76%), Gaps = 15/271 (5%)
Query: 5 MAAATASSSTSLRATPFLGQSRTTANALKDV------VPMGNAKYTMGNELWYGPDRVKY 58
MAA+ +TS FLG + ++ V + M + +WYGPDR KY
Sbjct: 1 MAASALHQTTS-----FLGTAPRRDELVRRVGDSGGRITMRRTVKSAPQSIWYGPDRPKY 55
Query: 59 LGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEV 118
LGPFS QTPSYLTGEFPGDYGWDTAGLSADPE FARNR LEVIH RWAMLGALGC+ PE+
Sbjct: 56 LGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEI 115
Query: 119 LEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRI 178
L K V F E VWFKAGAQIFSEGGLDYLGNPNLVHAQSILA+ QVVLMG VEG+R+
Sbjct: 116 LSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRV 174
Query: 179 NGLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVT 237
G P +GEG D +YPGG FDPLGLADDP TFAELKVKE+KNGRLAMFSMFGFFVQAIVT
Sbjct: 175 GGGP-LGEGLDKVYPGGA-FDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVT 232
Query: 238 GKGPLENLLDHLENPVANNAWVYATKFVPGS 268
GKGP+ENL DH+ +PVANNAW YAT FVPG
Sbjct: 233 GKGPIENLFDHVADPVANNAWAYATNFVPGK 263
>sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa
subsp. indica GN=OsI_012078 PE=2 SV=1
Length = 263
Score = 359 bits (921), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 189/271 (69%), Positives = 208/271 (76%), Gaps = 15/271 (5%)
Query: 5 MAAATASSSTSLRATPFLGQSRTTANALKDV------VPMGNAKYTMGNELWYGPDRVKY 58
MAA+ +TS FLG + ++ V + M + +WYGPDR KY
Sbjct: 1 MAASALHQTTS-----FLGTAPRRDELVRRVGDSGGRITMRRTVKSAPQSIWYGPDRPKY 55
Query: 59 LGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEV 118
LGPFS QTPSYLTGEFPGDYGWDTAGLSADPE FARNR LEVIH RWAMLGALGC+ PE+
Sbjct: 56 LGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEI 115
Query: 119 LEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRI 178
L K V F E VWFKAGAQIFSEGGLDYLGNPNLVHAQSILA+ QVVLMG VEG+R+
Sbjct: 116 LSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRV 174
Query: 179 NGLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVT 237
G P +GEG D +YPGG FDPLGLADDP TFAELKVKE+KNGRLAMFSMFGFFVQAIVT
Sbjct: 175 GGGP-LGEGLDKVYPGGA-FDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVT 232
Query: 238 GKGPLENLLDHLENPVANNAWVYATKFVPGS 268
GKGP+ENL DH+ +PVANNAW YAT FVPG
Sbjct: 233 GKGPIENLFDHVADPVANNAWAYATNFVPGK 263
>sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum
lycopersicum GN=CAB4 PE=2 SV=1
Length = 265
Score = 358 bits (918), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 184/267 (68%), Positives = 209/267 (78%), Gaps = 13/267 (4%)
Query: 12 SSTSLRATPFLGQS--RTTANALKDVVPMGNAKYTMG-------NELWYGPDRVKYLGPF 62
++ +++ + F+GQ+ ++ ++ V G + TM +WYG DR KYLGPF
Sbjct: 2 ATCAIQQSAFVGQAVGKSQNEFIRKVGNFGEGRITMRRTVKSAPQSIWYGEDRPKYLGPF 61
Query: 63 SAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEKW 122
S QTPSYLTGEFPGDYGWDTAGLSADPE FARNR LEVIH RWAMLGALGC+ PE+L K
Sbjct: 62 SEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSK- 120
Query: 123 LRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLP 182
V F E VWFKAG+QIFSEGGLDYLGNPNLVHAQSILA+ QVVLMG VEG+R+ G P
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGP 180
Query: 183 GVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 241
+GEG D +YPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 -LGEGLDKIYPGGA-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 238
Query: 242 LENLLDHLENPVANNAWVYATKFVPGS 268
+ENL DH+ +PVANNAW YAT FVPG
Sbjct: 239 IENLSDHINDPVANNAWAYATNFVPGK 265
>sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana
tabacum GN=CAB36 PE=3 SV=1
Length = 265
Score = 356 bits (913), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 182/267 (68%), Positives = 208/267 (77%), Gaps = 13/267 (4%)
Query: 12 SSTSLRATPFLGQS--RTTANALKDVVPMGNAKYTMG-------NELWYGPDRVKYLGPF 62
+++++ + F GQ+ ++ ++ + + TM +WYG DR KYLGPF
Sbjct: 2 ATSAIEQSAFAGQTALKSQNELVRKIGSFNGGRATMRRTVKSAPQSIWYGEDRPKYLGPF 61
Query: 63 SAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEKW 122
S QTPSYLTGEFPGDYGWDTAGLSADPE FARNR LEVIH RWAMLGALGC+ PE+L K
Sbjct: 62 SEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSK- 120
Query: 123 LRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLP 182
V F E VWFKAG+QIFSEGGLDYLGNPNL+HAQSILAV QVVLMGL+EG+R+ G P
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAVWASQVVLMGLIEGYRVGGGP 180
Query: 183 GVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 241
+GEG D +YPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 -LGEGLDKIYPGGA-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 238
Query: 242 LENLLDHLENPVANNAWVYATKFVPGS 268
+ENL DH+ +PVANNAW YAT FVPG
Sbjct: 239 IENLFDHVADPVANNAWAYATNFVPGK 265
>sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII type I, chloroplastic
OS=Lemna gibba PE=3 SV=1
Length = 264
Score = 355 bits (910), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 183/266 (68%), Positives = 211/266 (79%), Gaps = 12/266 (4%)
Query: 12 SSTSLRATPFLGQSR-TTANALKDVVPMGNAKYTMG-------NELWYGPDRVKYLGPFS 63
++++++++ F GQ+ + L V + + +++M +WYG DR K+LGPFS
Sbjct: 2 AASAIQSSAFAGQTALKQRDELVRKVGVSDGRFSMRRTVKAVPQSIWYGADRPKFLGPFS 61
Query: 64 AQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEKWL 123
QTPSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGCI PE+L K
Sbjct: 62 EQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSK-N 120
Query: 124 RVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPG 183
V F E VWFKAGAQIFSEGGLDYLGNPNLVHAQSILA+ QVVLMGL+EG+R+ G P
Sbjct: 121 GVQFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWATQVVLMGLIEGYRVGGGP- 179
Query: 184 VGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 242
+GEG D LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+
Sbjct: 180 LGEGLDPLYPGGA-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPI 238
Query: 243 ENLLDHLENPVANNAWVYATKFVPGS 268
ENL DH+ +PVANNAW +AT FVPG
Sbjct: 239 ENLADHIADPVANNAWAFATNFVPGK 264
>sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp.
GN=CAB37 PE=3 SV=1
Length = 265
Score = 355 bits (910), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 181/267 (67%), Positives = 209/267 (78%), Gaps = 13/267 (4%)
Query: 12 SSTSLRATPFLGQS--RTTANALKDVVPMGNAKYTMG-------NELWYGPDRVKYLGPF 62
++++++ + F GQ+ ++ ++ + G + TM +WYG DR KYLGPF
Sbjct: 2 ATSAIQQSAFAGQTALKSQNELVRKIGSFGGGRATMRRTVKSAPQSIWYGEDRPKYLGPF 61
Query: 63 SAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEKW 122
S QTPSYLTGEFPGDYGWDTAGLSADPE FARNR LEVIH RWAMLGALGC+ PE+L K
Sbjct: 62 SEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSK- 120
Query: 123 LRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLP 182
V F E VWFKAG+QIFSEGGLDYLGNPNL+HAQSILA+ QVVLMG VEG+R+ G P
Sbjct: 121 NGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMGFVEGYRVGGGP 180
Query: 183 GVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 241
+GEG D +YPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 -LGEGLDKIYPGGA-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 238
Query: 242 LENLLDHLENPVANNAWVYATKFVPGS 268
+ENL DH+ +PVANNAW +AT FVPG
Sbjct: 239 IENLYDHVADPVANNAWAFATNFVPGK 265
>sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium
hirsutum GN=CAB-151 PE=2 SV=2
Length = 265
Score = 354 bits (909), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 181/267 (67%), Positives = 209/267 (78%), Gaps = 13/267 (4%)
Query: 12 SSTSLRATPFLGQS--RTTANALKDVVPMGNAKYTMG-------NELWYGPDRVKYLGPF 62
++++++ + F GQ+ + + + + +G + +M +WYGPDR KYLGPF
Sbjct: 2 ATSAIQQSAFAGQTALKQSNELVCKIGAVGGGRVSMRRTVKSAPTSIWYGPDRPKYLGPF 61
Query: 63 SAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEKW 122
S Q PSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGC+ PE+L K
Sbjct: 62 SDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSK- 120
Query: 123 LRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLP 182
V F E VWFKAG+QIFSEGGLDYLGNPNL+HAQSILA+ QVVLMG VEG+R+ G P
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180
Query: 183 GVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 241
+GEG D +YPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 -LGEGLDPIYPGGA-FDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 238
Query: 242 LENLLDHLENPVANNAWVYATKFVPGS 268
+ENL DHL +PVANNAW YAT FVPG
Sbjct: 239 IENLFDHLADPVANNAWAYATNFVPGK 265
>sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays
GN=CAB1 PE=3 SV=1
Length = 262
Score = 353 bits (906), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 189/270 (70%), Positives = 210/270 (77%), Gaps = 14/270 (5%)
Query: 5 MAAAT-ASSSTSLRATPF----LGQSRTTANALKDVVPMGNAKYTMGNELWYGPDRVKYL 59
MAA+T A SST++ TP G+ R T ++ V G K WYGPDRVKYL
Sbjct: 1 MAASTMAISSTAMAGTPIKVGSFGEGRIT---MRKTV--GKPKVAASGSPWYGPDRVKYL 55
Query: 60 GPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVL 119
GPFS + PSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGC+ PE+L
Sbjct: 56 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 115
Query: 120 EKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRIN 179
+ V F E VWFKAG+QIFSEGGLDYLGNP+L+HAQSILA+ QVVLMG VEG+RI
Sbjct: 116 SR-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIA 174
Query: 180 GLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 238
G P +GE D LYPGG FDPLGLADDP FAELKVKE+KNGRLAMFSMFGFFVQAIVTG
Sbjct: 175 GGP-LGEVVDPLYPGGS-FDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 232
Query: 239 KGPLENLLDHLENPVANNAWVYATKFVPGS 268
KGPLENL DH+ +PV NNAW YAT FVPG+
Sbjct: 233 KGPLENLADHIADPVNNNAWAYATNFVPGN 262
>sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana
tabacum GN=CAB16 PE=2 SV=1
Length = 266
Score = 352 bits (904), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 185/269 (68%), Positives = 209/269 (77%), Gaps = 17/269 (6%)
Query: 11 SSSTSLRATPFLGQSRTTANALKDVVPMGNAKYTM-----------GNELWYGPDRVKYL 59
++ST+ ++PF G++ + + +V GN K TM WYGPDRVKYL
Sbjct: 2 AASTTALSSPFAGKAVKLSPSSSEVT--GNGKVTMRKTASKAKPVSSGSPWYGPDRVKYL 59
Query: 60 GPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVL 119
GPFS ++PSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGC+ PE+L
Sbjct: 60 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 119
Query: 120 EKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRIN 179
+ V F E VWFKAG+QIFSEGGLDYLGNP+LVHAQSILA+ QVVLMG VEG+R+
Sbjct: 120 AR-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVA 178
Query: 180 GLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 238
G P +GE D LYPGG FDPLGLA+DP FAELKVKEIKNGRLAMFSMFGFFVQAIVTG
Sbjct: 179 GGP-LGEVVDPLYPGGS-FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 236
Query: 239 KGPLENLLDHLENPVANNAWVYATKFVPG 267
KGPLENL DHL +PV NNAW YAT FVPG
Sbjct: 237 KGPLENLADHLADPVNNNAWSYATNFVPG 265
>sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum
GN=CAB215 PE=1 SV=1
Length = 265
Score = 352 bits (904), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 181/267 (67%), Positives = 210/267 (78%), Gaps = 13/267 (4%)
Query: 12 SSTSLRATPFLGQS--RTTANALKDVVPMGNAKYTMGN-------ELWYGPDRVKYLGPF 62
++++++ + F G++ R ++ G A++TM +WYGPDR KYLGPF
Sbjct: 2 ATSAIQQSAFTGKTGLRQGNEFIRKRGNFGQARFTMRRTVKSAPESIWYGPDRPKYLGPF 61
Query: 63 SAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEKW 122
S Q PSYLTGEFPGDYGWDTAGLSADPE FARNR LEVIH RWAMLGALGC PE+LEK
Sbjct: 62 SEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFPELLEK- 120
Query: 123 LRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLP 182
V F E VWFKAG+QIF+EGGLDYLGNPNL+HAQSILA+ QVVLMG VEG+R+ G P
Sbjct: 121 NGVKFGEAVWFKAGSQIFAEGGLDYLGNPNLIHAQSILAIWATQVVLMGFVEGYRVGGGP 180
Query: 183 GVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 241
+GEG D LYPGG FDPLGLADDP +FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 -LGEGLDPLYPGGA-FDPLGLADDPDSFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 238
Query: 242 LENLLDHLENPVANNAWVYATKFVPGS 268
++NL DH+ +PVANNAW +AT FVPG
Sbjct: 239 IQNLYDHVADPVANNAWAFATNFVPGQ 265
>sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum
lycopersicum GN=CAB3C PE=3 SV=1
Length = 267
Score = 352 bits (902), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 184/270 (68%), Positives = 209/270 (77%), Gaps = 17/270 (6%)
Query: 10 ASSSTSLRATPFLGQSRTTANALKDVVPMGNAKYTM-----------GNELWYGPDRVKY 58
A+S+ +L ++ F G++ + + ++ GN + TM WYGPDRVKY
Sbjct: 2 ATSTMALSSSTFAGKAVKLSPSSSEIT--GNGRVTMRKTATKAKPASSGSPWYGPDRVKY 59
Query: 59 LGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEV 118
LGPFS ++PSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGC+ PE+
Sbjct: 60 LGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 119
Query: 119 LEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRI 178
L + V F E VWFKAG+QIFSEGGLDYLGNP+LVHAQSILA+ QVVLMG VEG+RI
Sbjct: 120 LAR-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRI 178
Query: 179 NGLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVT 237
G P +GE D LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMFGFFVQAIVT
Sbjct: 179 AGGP-LGEVVDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVT 236
Query: 238 GKGPLENLLDHLENPVANNAWVYATKFVPG 267
GKGPLENL DHL +PV NNAW +AT FVPG
Sbjct: 237 GKGPLENLADHLADPVNNNAWAFATNFVPG 266
>sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana
plumbaginifolia GN=CABE PE=3 SV=1
Length = 266
Score = 352 bits (902), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 184/269 (68%), Positives = 209/269 (77%), Gaps = 17/269 (6%)
Query: 11 SSSTSLRATPFLGQSRTTANALKDVVPMGNAKYTM-----------GNELWYGPDRVKYL 59
++ST+ ++PF G++ + + +V GN K TM WYGPDRVKYL
Sbjct: 2 AASTTALSSPFAGKAVKLSPSSSEVT--GNGKVTMRKTANKAKPVSSGSPWYGPDRVKYL 59
Query: 60 GPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVL 119
GPFS ++PSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGC+ PE+L
Sbjct: 60 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 119
Query: 120 EKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRIN 179
+ V F E VWFKAG+QIFSEGGLDYLGNP+LVHAQSILA+ QVVLMG VEG+R+
Sbjct: 120 AR-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVA 178
Query: 180 GLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 238
G P +GE D LYPGG FDPLGLA+DP FAELKVKEIKNGRLAMFSMFGFFVQA+VTG
Sbjct: 179 GEP-LGEVVDPLYPGGS-FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQALVTG 236
Query: 239 KGPLENLLDHLENPVANNAWVYATKFVPG 267
KGPLENL DHL +PV NNAW YAT FVPG
Sbjct: 237 KGPLENLADHLADPVNNNAWSYATNFVPG 265
>sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana
tabacum GN=CAB40 PE=2 SV=1
Length = 267
Score = 350 bits (899), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 184/270 (68%), Positives = 208/270 (77%), Gaps = 17/270 (6%)
Query: 10 ASSSTSLRATPFLGQSRTTANALKDVVPMGNAKYTM-----------GNELWYGPDRVKY 58
A+S+ +L + F G++ + + ++ GN K TM WYGPDRVKY
Sbjct: 2 AASTMALSSPSFAGKAVKLSPSSSEIT--GNGKVTMRKTASKAKTVSSGSPWYGPDRVKY 59
Query: 59 LGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEV 118
LGPFS ++PSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGC+ PE+
Sbjct: 60 LGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 119
Query: 119 LEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRI 178
L + V F E VWFKAG+QIFSEGGLDYLGNP+LVHAQSILA+ QVVLMG VEG+R+
Sbjct: 120 LAR-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRV 178
Query: 179 NGLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVT 237
G P +GE D LYPGG FDPLGLA+DP FAELKVKEIKNGRLAMFSMFGFFVQAIVT
Sbjct: 179 AGGP-LGEVVDPLYPGGS-FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVT 236
Query: 238 GKGPLENLLDHLENPVANNAWVYATKFVPG 267
GKGPLENL DHL +PV NNAW YAT FVPG
Sbjct: 237 GKGPLENLADHLADPVNNNAWAYATNFVPG 266
>sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum
lycopersicum GN=CAB1B PE=3 SV=1
Length = 265
Score = 350 bits (899), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 183/268 (68%), Positives = 209/268 (77%), Gaps = 15/268 (5%)
Query: 10 ASSSTSLRATPFLGQSRTTANALKDVVPMGNAKYTMGNEL---------WYGPDRVKYLG 60
A+++ +L + F GQ+ + + ++ GN + TM + WYGPDRVKYLG
Sbjct: 2 AAATMALSSPSFAGQAVKLSPSASEI--SGNGRITMRKAVAKSAPSSSPWYGPDRVKYLG 59
Query: 61 PFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLE 120
PFS ++PSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGC+ PE+L
Sbjct: 60 PFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 119
Query: 121 KWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRING 180
+ V F E VWFKAG+QIFSEGGLDYLGNP+LVHAQSILA+ QVVLMG VEG+RI G
Sbjct: 120 R-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 178
Query: 181 LPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 239
P +GE D LYPGG FDPLGLA+DP FAELKVKEIKNGRLAMFSMFGFFVQAIVTGK
Sbjct: 179 GP-LGEVVDPLYPGGS-FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 236
Query: 240 GPLENLLDHLENPVANNAWVYATKFVPG 267
GPLENL DHL +PV NNAW +AT FVPG
Sbjct: 237 GPLENLADHLADPVNNNAWAFATNFVPG 264
>sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloroplastic (Fragment)
OS=Solanum lycopersicum GN=CAB5 PE=2 SV=1
Length = 237
Score = 350 bits (897), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 176/223 (78%), Positives = 189/223 (84%), Gaps = 4/223 (1%)
Query: 47 NELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWA 106
+WYG DR KYLGPFS QTPSYLTGEFPGDYGWDTAGLSADPE FARNR LEVIH RWA
Sbjct: 18 QSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWA 77
Query: 107 MLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQ 166
MLGALGC+ PE+L K V F E VWFKAG+QIFSEGGLDYLGNPNL+HAQSILA+ Q
Sbjct: 78 MLGALGCVFPEILSK-NGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQ 136
Query: 167 VVLMGLVEGFRINGLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMF 225
VVLMG VEG+R+ G P +GEG D +YPGG FDPLGLADDP FAELKVKEIKNGRLAMF
Sbjct: 137 VVLMGFVEGYRVGGGP-LGEGLDKIYPGGA-FDPLGLADDPEAFAELKVKEIKNGRLAMF 194
Query: 226 SMFGFFVQAIVTGKGPLENLLDHLENPVANNAWVYATKFVPGS 268
SMFGFFVQAIVTGKGP+ENL DH+ +PVANNAW YAT FVPG
Sbjct: 195 SMFGFFVQAIVTGKGPIENLSDHIADPVANNAWAYATNFVPGK 237
>sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum
GN=CAB8 PE=1 SV=1
Length = 268
Score = 350 bits (897), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 186/276 (67%), Positives = 209/276 (75%), Gaps = 21/276 (7%)
Query: 4 IMAAATASSSTSLRATPFLGQSRTTANALKDVVPMGNAKYTMGNEL-----------WYG 52
+ A++ A SS +L P T+AN +G A++TM WYG
Sbjct: 1 MAASSMALSSPTLTGKPV----ETSANPSSQ--ELGGARFTMRKSATTKKVASSGSPWYG 54
Query: 53 PDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALG 112
PDRVKYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPE F++NR LEVIH RWAMLGALG
Sbjct: 55 PDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALG 114
Query: 113 CITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGL 172
C+ PE+L + V F E VWFKAG+QIFSEGGLDYLGNP+LVHAQSILA+ QV+LMG
Sbjct: 115 CVFPELLSR-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGA 173
Query: 173 VEGFRINGLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFF 231
VEG+RI G P +GE D LYPGG FDPLGLADDP FAELKVKE+KNGRLAMFSMFGFF
Sbjct: 174 VEGYRIAGGP-LGEVVDPLYPGGS-FDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFF 231
Query: 232 VQAIVTGKGPLENLLDHLENPVANNAWVYATKFVPG 267
VQAIVTGKGPLENL DHL +PV NNAW YAT FVPG
Sbjct: 232 VQAIVTGKGPLENLADHLSDPVNNNAWSYATNFVPG 267
>sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp.
GN=CAB22R PE=3 SV=1
Length = 267
Score = 350 bits (897), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 181/270 (67%), Positives = 208/270 (77%), Gaps = 17/270 (6%)
Query: 10 ASSSTSLRATPFLGQSRTTANALKDVVPMGNAKYTMGNEL-----------WYGPDRVKY 58
A+++ +L ++ F G++ +++ ++ GN K TM + WYGPDRVKY
Sbjct: 2 AATTMALSSSSFAGKAVKLSSSSSEIT--GNGKVTMRKTVTKAKPASSSSPWYGPDRVKY 59
Query: 59 LGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEV 118
LGPFS + PSYLTGEFP DYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGC+ PE+
Sbjct: 60 LGPFSGEAPSYLTGEFPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 119
Query: 119 LEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRI 178
+ + F E VWFKAGAQIFSEGGLDYLGNP+LVHAQSILA+ QVVLMG VEG+R+
Sbjct: 120 FAR-NGIKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRV 178
Query: 179 NGLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVT 237
G P +GE D LYPGG FDPLGLA+DP FAELKVKEIKNGRLAMFSMFGFFVQAIVT
Sbjct: 179 AGGP-LGEVIDPLYPGGS-FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVT 236
Query: 238 GKGPLENLLDHLENPVANNAWVYATKFVPG 267
GKGPLENL DHL +PV NNAW YAT FVPG
Sbjct: 237 GKGPLENLADHLADPVNNNAWSYATNFVPG 266
>sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana
tabacum GN=CAB21 PE=2 SV=1
Length = 265
Score = 349 bits (895), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 181/268 (67%), Positives = 209/268 (77%), Gaps = 15/268 (5%)
Query: 10 ASSSTSLRATPFLGQSRTTANALKDVVPMGNAKYTMGNEL---------WYGPDRVKYLG 60
A+++ +L + F GQ+ + + ++ GN + +M + WYGPDRVKYLG
Sbjct: 2 AAATMALSSPSFAGQAVKLSPSAPEIT--GNGRVSMRKTVAKPVASSSPWYGPDRVKYLG 59
Query: 61 PFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLE 120
PFS ++PSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGC+ PE+L
Sbjct: 60 PFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 119
Query: 121 KWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRING 180
+ V F E VWFKAG+QIFSEGGLDYLGNP+LVHAQSILA+ QV+LMG VEG+R+ G
Sbjct: 120 R-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 178
Query: 181 LPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 239
P +GE D LYPGG FDPLGLA+DP FAELKVKEIKNGRLAMFSMFGFFVQAIVTGK
Sbjct: 179 GP-LGEVVDPLYPGGS-FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 236
Query: 240 GPLENLLDHLENPVANNAWVYATKFVPG 267
GPLENL DHL +PV NNAW YAT FVPG
Sbjct: 237 GPLENLADHLADPVNNNAWAYATNFVPG 264
>sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana
tabacum GN=CAB50 PE=2 SV=1
Length = 267
Score = 349 bits (895), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 182/270 (67%), Positives = 209/270 (77%), Gaps = 17/270 (6%)
Query: 10 ASSSTSLRATPFLGQSRTTANALKDVVPMGNAKYTMGNEL-----------WYGPDRVKY 58
A+++ +L ++ F G++ + + ++ GN K TM + WYGPDRVKY
Sbjct: 2 AAATMALSSSSFAGKAVKLSPSSSEIT--GNGKVTMRKTVTKAKPLSSGSPWYGPDRVKY 59
Query: 59 LGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEV 118
LGPFS ++PSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGC+ PE+
Sbjct: 60 LGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 119
Query: 119 LEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRI 178
L + V F E VWFKAG+QIFSEGGLDYLGNP+LVHAQSILA+ QVVLMG VEG+R+
Sbjct: 120 LAR-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRV 178
Query: 179 NGLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVT 237
G P +GE D LYPGG FDPLGLA+DP FAELKVK IKNGRLAMFSMFGFFVQAIVT
Sbjct: 179 AGGP-LGEVVDPLYPGGS-FDPLGLAEDPEAFAELKVKHIKNGRLAMFSMFGFFVQAIVT 236
Query: 238 GKGPLENLLDHLENPVANNAWVYATKFVPG 267
GKGPLENL DHL +PV NNAW YAT FVPG
Sbjct: 237 GKGPLENLADHLADPVNNNAWSYATNFVPG 266
>sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp.
GN=CAB25 PE=3 SV=1
Length = 266
Score = 349 bits (895), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 187/268 (69%), Positives = 206/268 (76%), Gaps = 8/268 (2%)
Query: 5 MAAAT---ASSSTSLRATPFLGQSRTTANALKDVVP-MGNAKYTMGNELWYGPDRVKYLG 60
MAAAT +SSS + +A S+ T N + + AK WYGPDRVKYLG
Sbjct: 1 MAAATMAISSSSFAGKAVNVPSSSQITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLG 60
Query: 61 PFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLE 120
PFS + PSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGC+ PE+
Sbjct: 61 PFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFA 120
Query: 121 KWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRING 180
+ V F E VWFKAG+QIFSEGGLDYLGNP+LVHAQSILA+ QVVLMG VEG+R+ G
Sbjct: 121 R-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 179
Query: 181 LPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 239
P +GE D LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMFGFFVQAIVTGK
Sbjct: 180 GP-LGEVIDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 237
Query: 240 GPLENLLDHLENPVANNAWVYATKFVPG 267
GPLENL DHL +PV NNAW +AT FVPG
Sbjct: 238 GPLENLADHLADPVNNNAWAFATNFVPG 265
>sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII type I, chloroplastic
(Fragment) OS=Cucumis sativus PE=2 SV=1
Length = 255
Score = 349 bits (895), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 180/240 (75%), Positives = 194/240 (80%), Gaps = 13/240 (5%)
Query: 38 MGNAKYTM---------GNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSAD 88
GNAK+TM WYGPDRVKYLGPFS + PSYLTGEFPGDYGWDTAGLSAD
Sbjct: 18 QGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSAD 77
Query: 89 PEAFARNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYL 148
PE FA+NR LEVIH RWAMLGALGC+ PE+L + V F E VWFKAG+QIFSEGGLDYL
Sbjct: 78 PETFAKNRELEVIHSRWAMLGALGCVFPELLSR-NGVKFGEAVWFKAGSQIFSEGGLDYL 136
Query: 149 GNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGND-LYPGGQYFDPLGLADDPV 207
GNP+LVHAQSILA+ QVVLMG VEG+RI G P +GE D +YPGG FDPLGLADDP
Sbjct: 137 GNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP-LGEVTDPIYPGGS-FDPLGLADDPE 194
Query: 208 TFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLENPVANNAWVYATKFVPG 267
FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENL DHL +PV NNAW YAT FVPG
Sbjct: 195 AFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 254
>sp|P12469|CB23_NICPL Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana
plumbaginifolia GN=CABC PE=3 SV=1
Length = 267
Score = 348 bits (894), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 181/270 (67%), Positives = 209/270 (77%), Gaps = 17/270 (6%)
Query: 10 ASSSTSLRATPFLGQSRTTANALKDVVPMGNAKYTM-----------GNELWYGPDRVKY 58
A+S+ +L ++ F G++ + + ++ GN K TM + WYGP+RVKY
Sbjct: 2 AASTMALSSSSFAGKAVKLSPSSSEIT--GNGKVTMRKTASKAKPVSSSSPWYGPNRVKY 59
Query: 59 LGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEV 118
LGPFS ++PSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGC+ PE+
Sbjct: 60 LGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 119
Query: 119 LEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRI 178
L + V F E VWFK G+QIFS+GGLDYLGNP+LVHAQSILA+ QVVLMG VEG+R+
Sbjct: 120 LAR-NGVKFGEAVWFKGGSQIFSQGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRV 178
Query: 179 NGLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVT 237
G P +GE D LYPGG FDPLGLA+DP FAELKVKEIKNGRLAMFSMFGFFVQAIVT
Sbjct: 179 AGEP-LGEVVDPLYPGGS-FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVT 236
Query: 238 GKGPLENLLDHLENPVANNAWVYATKFVPG 267
GKGPLENL DHL +PV NNAW YAT FVPG
Sbjct: 237 GKGPLENLADHLADPVNNNAWAYATNFVPG 266
>sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana
tabacum GN=CAB7 PE=3 SV=1
Length = 267
Score = 348 bits (892), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 182/268 (67%), Positives = 207/268 (77%), Gaps = 6/268 (2%)
Query: 2 ASIMAAATAS-SSTSLRATPFLGQSRTTANALKDVVPMGNAKYTMGNELWYGPDRVKYLG 60
AS MA ++ S + +++ +P + A+ + AK WYGPDRVKYLG
Sbjct: 3 ASTMALSSPSFAGNAVKLSPSSSEITGNGKAIMRKT-VTKAKPVSSGSPWYGPDRVKYLG 61
Query: 61 PFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLE 120
PFS + PSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGC+ PE+L
Sbjct: 62 PFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 121
Query: 121 KWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRING 180
+ V F E VWFKAG+QIFSEGGLDYLGNP+LVHAQSILA+ QVVLMG +EG+R+ G
Sbjct: 122 R-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAIEGYRVAG 180
Query: 181 LPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 239
P +GE D LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMFGFFVQAIVTGK
Sbjct: 181 GP-LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 238
Query: 240 GPLENLLDHLENPVANNAWVYATKFVPG 267
GPL+NL+DHL +PV NNAW YAT FVPG
Sbjct: 239 GPLDNLVDHLADPVNNNAWAYATNFVPG 266
>sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea
PE=1 SV=1
Length = 267
Score = 348 bits (892), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 180/251 (71%), Positives = 198/251 (78%), Gaps = 9/251 (3%)
Query: 18 ATPFLGQSRTTANALKDVVPMGNAKYTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGD 77
A+ +G+ R T G K + WYGPDRVKYLGPFS ++PSYLTGEFPGD
Sbjct: 24 ASEIIGEGRITMRKTA-----GKPKTVQSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGD 78
Query: 78 YGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGA 137
YGWDTAGLSADPE FA+NR LEVIH RWAMLGALGC+ PE+L + V F E VWFKAG+
Sbjct: 79 YGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGS 137
Query: 138 QIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGND-LYPGGQY 196
QIFSEGGLDYLGNP+LVHAQSILA+ QV+LMG VEG+RI G P +GE D LYPGG
Sbjct: 138 QIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGP-LGEVVDPLYPGGS- 195
Query: 197 FDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLENPVANN 256
FDPLGLADDP FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL DHL +PV NN
Sbjct: 196 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 255
Query: 257 AWVYATKFVPG 267
AW +AT FVPG
Sbjct: 256 AWNFATNFVPG 266
>sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus
thunbergii PE=2 SV=1
Length = 266
Score = 348 bits (892), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 186/272 (68%), Positives = 203/272 (74%), Gaps = 14/272 (5%)
Query: 5 MAAATASSSTSLRATPFLGQSRTTANALKDVVPMGNAKYTMGN-------ELWYGPDRVK 57
MA A+A S+SL L R N L V A+ TM +WYGPDR K
Sbjct: 1 MATASAIQSSSLAGQTLL---RPQQNELVKKVGTAQARITMRRTVRSAPESIWYGPDRPK 57
Query: 58 YLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPE 117
YLGPFS TPSYLTGEFPGDYGWDTA +SADPE FA+NR LEVIH RWAMLGALGC+ PE
Sbjct: 58 YLGPFSEGTPSYLTGEFPGDYGWDTAAVSADPETFAKNRELEVIHCRWAMLGALGCVFPE 117
Query: 118 VLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFR 177
+L K + F E VWFKAGAQIFSEGGLDY GNPNL+HAQSILA+ QVVLMGL+EG+R
Sbjct: 118 LLAK-NGLKFGEAVWFKAGAQIFSEGGLDYAGNPNLIHAQSILAIWACQVVLMGLIEGYR 176
Query: 178 INGLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIV 236
+ G +GEG D L PGG FDPLGLADDP AELKVKEIKNGRLAMFSMFGFFVQAIV
Sbjct: 177 VGG-GTLGEGLDPLLPGGA-FDPLGLADDPEACAELKVKEIKNGRLAMFSMFGFFVQAIV 234
Query: 237 TGKGPLENLLDHLENPVANNAWVYATKFVPGS 268
TGKGP+ENL DHL +PVANNAW YAT FVPG
Sbjct: 235 TGKGPIENLYDHLADPVANNAWAYATNFVPGK 266
>sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp.
GN=CAB91R PE=3 SV=1
Length = 267
Score = 347 bits (890), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 183/270 (67%), Positives = 207/270 (76%), Gaps = 17/270 (6%)
Query: 10 ASSSTSLRATPFLGQSRTTANALKDVVPMGNAKYTMGNEL-----------WYGPDRVKY 58
A+++ +L + F G++ + + ++ GN K TM + WYGPDRVKY
Sbjct: 2 AAATMALSSPSFAGKAVKFSPSSSEIT--GNGKATMRKTVTKAKPVSSGSPWYGPDRVKY 59
Query: 59 LGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEV 118
LGPFS + PSYLTGEFPGDYGWDTA LSADPE FA+NR LEVIH RWAMLGALGC+ PE+
Sbjct: 60 LGPFSGEAPSYLTGEFPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 119
Query: 119 LEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRI 178
L + V F E VWFKAG+QIFSEGGLDYLGNP+LVHAQSILA+ QVVLMG VEG+R+
Sbjct: 120 LAR-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRV 178
Query: 179 NGLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVT 237
G P +GE D LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMFGFFVQAIVT
Sbjct: 179 AGGP-LGEVVDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVT 236
Query: 238 GKGPLENLLDHLENPVANNAWVYATKFVPG 267
GKGPLENL DHL +PV NNAW YAT FVPG
Sbjct: 237 GKGPLENLADHLADPVNNNAWSYATNFVPG 266
>sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloroplastic OS=Hordeum vulgare
GN=CAB2 PE=3 SV=1
Length = 264
Score = 346 bits (887), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 180/267 (67%), Positives = 208/267 (77%), Gaps = 14/267 (5%)
Query: 10 ASSSTSLRATPFLGQSRTTANALKDVVPMGNAKYTMGNEL--------WYGPDRVKYLGP 61
A+++ +L ++ F G++ ++ +V G+A+ +M WYGPDRVKYLGP
Sbjct: 2 AAATMALSSSTFAGKAVKNLSSSSEV--QGDARVSMRKTAATKKVGSPWYGPDRVKYLGP 59
Query: 62 FSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEK 121
FS ++PSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVIHGRWAMLGALGC+ PE+L +
Sbjct: 60 FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALGCVFPELLAR 119
Query: 122 WLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGL 181
V F E VWFK G+QIFSEGGL YLGNP+LVHAQSILA+ QVVLMG VEG+R+ G
Sbjct: 120 -NGVKFGEAVWFKKGSQIFSEGGLQYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGG 178
Query: 182 PGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240
P +GE D LYPGG FDPLGLADD FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 179 P-LGEVVDPLYPGGS-FDPLGLADDAEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 236
Query: 241 PLENLLDHLENPVANNAWVYATKFVPG 267
PLENL DHL +PV NNAW +AT FVPG
Sbjct: 237 PLENLADHLADPVNNNAWAFATNFVPG 263
>sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella
patens subsp. patens PE=3 SV=1
Length = 269
Score = 346 bits (887), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 187/271 (69%), Positives = 206/271 (76%), Gaps = 10/271 (3%)
Query: 5 MAAATASSSTSLR----ATPFLGQSRTTANALKDVVPMGN--AKYTMGNELWYGPDRVKY 58
MAAATA ST+L P SR ++ V M +K + +WYG DR K+
Sbjct: 1 MAAATAMHSTALAGQSLVKPVNELSRKVLGNVEARVTMRRTVSKSAGSDTIWYGADRPKF 60
Query: 59 LGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEV 118
LGPFS +TPSYL GEF GDYGWDTAGLS+DPE FARNR LEVIH RWAMLGALGC+TPE+
Sbjct: 61 LGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPEL 120
Query: 119 LEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRI 178
L K V F E VWFKAGAQIFSEGGLDYLGNP+LVHAQSILA+ QVVLMG VEG+R+
Sbjct: 121 LAK-SGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRV 179
Query: 179 NGLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVT 237
G P +GE D +YPGG FDPLGLADDP TFAELKVKEIKNGRLAMFSMFGFFVQAIVT
Sbjct: 180 AGGP-LGEVTDPIYPGGS-FDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVT 237
Query: 238 GKGPLENLLDHLENPVANNAWVYATKFVPGS 268
GKGPLENL DHL +PVANNAW YA PG+
Sbjct: 238 GKGPLENLNDHLADPVANNAWAYAPTSPPGT 268
>sp|Q8VZ87|CB1B_ARATH Chlorophyll a-b binding protein 3, chloroplastic OS=Arabidopsis
thaliana GN=LHCB1.2 PE=1 SV=2
Length = 267
Score = 345 bits (886), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 178/269 (66%), Positives = 207/269 (76%), Gaps = 15/269 (5%)
Query: 10 ASSSTSLRATPFLGQSRTTANALKDVVPMGNAKYTMGNEL----------WYGPDRVKYL 59
A+S+ +L + F G++ + A +V +G+ + TM + WYG DRVKYL
Sbjct: 2 AASTMALSSPAFAGKAVNLSPAASEV--LGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYL 59
Query: 60 GPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVL 119
GPFS ++PSYLTGEFPGDYGWDTAGLSADPE FARNR LEVIH RWAMLGALGC+ PE+L
Sbjct: 60 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELL 119
Query: 120 EKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRIN 179
+ V F E VWFKAG+QIFS+GGLDYLGNP+LVHAQSILA+ QV+LMG VEG+R+
Sbjct: 120 AR-NGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVA 178
Query: 180 GLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 238
G +GE D LYPGG FDPLGLA DP FAELKVKE+KNGRLAMFSMFGFFVQAIVTG
Sbjct: 179 GNGPLGEAEDLLYPGGS-FDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 237
Query: 239 KGPLENLLDHLENPVANNAWVYATKFVPG 267
KGP+ENL DHL +PV NNAW +AT FVPG
Sbjct: 238 KGPIENLADHLADPVNNNAWAFATNFVPG 266
>sp|P0CJ48|CB1A_ARATH Chlorophyll a-b binding protein 2, chloroplastic OS=Arabidopsis
thaliana GN=LHCB1.1 PE=1 SV=1
Length = 267
Score = 345 bits (886), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 178/269 (66%), Positives = 207/269 (76%), Gaps = 15/269 (5%)
Query: 10 ASSSTSLRATPFLGQSRTTANALKDVVPMGNAKYTMGNEL----------WYGPDRVKYL 59
A+S+ +L + F G++ + A +V +G+ + TM + WYG DRVKYL
Sbjct: 2 AASTMALSSPAFAGKAVNLSPAASEV--LGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYL 59
Query: 60 GPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVL 119
GPFS ++PSYLTGEFPGDYGWDTAGLSADPE FARNR LEVIH RWAMLGALGC+ PE+L
Sbjct: 60 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELL 119
Query: 120 EKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRIN 179
+ V F E VWFKAG+QIFS+GGLDYLGNP+LVHAQSILA+ QV+LMG VEG+R+
Sbjct: 120 AR-NGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVA 178
Query: 180 GLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 238
G +GE D LYPGG FDPLGLA DP FAELKVKE+KNGRLAMFSMFGFFVQAIVTG
Sbjct: 179 GNGPLGEAEDLLYPGGS-FDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 237
Query: 239 KGPLENLLDHLENPVANNAWVYATKFVPG 267
KGP+ENL DHL +PV NNAW +AT FVPG
Sbjct: 238 KGPIENLADHLADPVNNNAWAFATNFVPG 266
>sp|P04778|CB1C_ARATH Chlorophyll a-b binding protein 1, chloroplastic OS=Arabidopsis
thaliana GN=LHCB1.3 PE=1 SV=1
Length = 267
Score = 345 bits (886), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 178/269 (66%), Positives = 207/269 (76%), Gaps = 15/269 (5%)
Query: 10 ASSSTSLRATPFLGQSRTTANALKDVVPMGNAKYTMGNEL----------WYGPDRVKYL 59
A+S+ +L + F G++ + A +V +G+ + TM + WYG DRVKYL
Sbjct: 2 AASTMALSSPAFAGKAVKLSPAASEV--LGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYL 59
Query: 60 GPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVL 119
GPFS ++PSYLTGEFPGDYGWDTAGLSADPE FARNR LEVIH RWAMLGALGC+ PE+L
Sbjct: 60 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELL 119
Query: 120 EKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRIN 179
+ V F E VWFKAG+QIFS+GGLDYLGNP+LVHAQSILA+ QV+LMG VEG+R+
Sbjct: 120 AR-NGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVA 178
Query: 180 GLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 238
G +GE D LYPGG FDPLGLA DP FAELKVKE+KNGRLAMFSMFGFFVQAIVTG
Sbjct: 179 GNGPLGEAEDLLYPGGS-FDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 237
Query: 239 KGPLENLLDHLENPVANNAWVYATKFVPG 267
KGP+ENL DHL +PV NNAW +AT FVPG
Sbjct: 238 KGPIENLADHLADPVNNNAWAFATNFVPG 266
>sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum
sativum GN=AB80 PE=1 SV=1
Length = 269
Score = 345 bits (885), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 173/219 (78%), Positives = 188/219 (85%), Gaps = 4/219 (1%)
Query: 50 WYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLG 109
WYGPDRVKYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPE F++NR LEVIH RWAMLG
Sbjct: 53 WYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLG 112
Query: 110 ALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVL 169
ALGC+ PE+L + V F E VWFKAG+QIFSEGGLDYLGNP+LVHAQSILA+ QV+L
Sbjct: 113 ALGCVFPELLSR-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVIL 171
Query: 170 MGLVEGFRINGLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMF 228
MG VEG+RI G P +GE D LYPGG FDPLGLADDP FAELKVKE+KNGRLAMFSMF
Sbjct: 172 MGAVEGYRIAGGP-LGEVVDPLYPGGS-FDPLGLADDPEAFAELKVKELKNGRLAMFSMF 229
Query: 229 GFFVQAIVTGKGPLENLLDHLENPVANNAWVYATKFVPG 267
GFFVQAIVTGKGPLENL DHL +PV NNAW YAT FVPG
Sbjct: 230 GFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPG 268
>sp|P13851|CB21_SINAL Chlorophyll a-b binding protein 1, chloroplastic OS=Sinapis alba
GN=CAB1 PE=3 SV=1
Length = 266
Score = 344 bits (882), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 180/268 (67%), Positives = 203/268 (75%), Gaps = 14/268 (5%)
Query: 10 ASSSTSLRATPFLGQSRTTANALKDVVPMGNAKYTMGNEL---------WYGPDRVKYLG 60
A+S+ +L + F G++ + +V G + TM + WYG DRVKYLG
Sbjct: 2 AASTMALSSPAFAGKAVKLSPGASEV--FGTGRVTMRKTVKPTGPSGSPWYGSDRVKYLG 59
Query: 61 PFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLE 120
PFS + PSYLTGEFPGDYGWDTAGLSADPE FARNR LEVIH RWAMLGALGC+ PE+L
Sbjct: 60 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLA 119
Query: 121 KWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRING 180
+ V F E VWFKAG+QIFSEGGLDYLGNP+LVHAQSILA+ QV+LMG VEG+R+ G
Sbjct: 120 R-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG 178
Query: 181 LPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 239
+GE D LYPGG FDPLGLA DP FAELKVKEIKNGRLAMFSMFGFFVQAIVTGK
Sbjct: 179 EGPLGEAEDLLYPGGS-FDPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 237
Query: 240 GPLENLLDHLENPVANNAWVYATKFVPG 267
GPLENL DHL +PV NNAW +AT FVPG
Sbjct: 238 GPLENLADHLADPVNNNAWAFATNFVPG 265
>sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member F3, chloroplastic
OS=Polystichum munitum GN=CABF3 PE=3 SV=1
Length = 265
Score = 343 bits (880), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 179/267 (67%), Positives = 201/267 (75%), Gaps = 13/267 (4%)
Query: 10 ASSSTSLRATPFLGQSRTTANALKDVVPMGNAKYTM--------GNELWYGPDRVKYLGP 61
A+S+ +L +T F GQ N L V G A+ M +WYG DR YLGP
Sbjct: 2 ATSTAALTST-FSGQQLKPVNELSRKVGAGEARVQMMAPKSKAPSGSIWYGSDRPLYLGP 60
Query: 62 FSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEK 121
FS PSYL+GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGC+TPE+L K
Sbjct: 61 FSGSPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAK 120
Query: 122 WLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGL 181
V F E VWFKAG+QIF+EGGLDYLGNP+LVHAQSILA+ QV+LMG VEG+R+ G
Sbjct: 121 -NGVKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGG 179
Query: 182 PGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240
P +GE D +YPGG FDPLGLADDP FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 180 P-LGEVEDPIYPGGS-FDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 237
Query: 241 PLENLLDHLENPVANNAWVYATKFVPG 267
P+ENL DHL +P NNAW YAT F PG
Sbjct: 238 PIENLSDHLADPAVNNAWAYATNFTPG 264
>sp|P09756|CB23_SOYBN Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max
GN=CAB3 PE=3 SV=1
Length = 263
Score = 343 bits (879), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 172/219 (78%), Positives = 186/219 (84%), Gaps = 4/219 (1%)
Query: 50 WYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLG 109
WYGPDRVKYLGPFS + PSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLG
Sbjct: 47 WYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLG 106
Query: 110 ALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVL 169
ALGC+ PE+L + V F E VWFKAG+QIFSEGGLDYLGNP+L+HAQSILA+ QV+L
Sbjct: 107 ALGCVFPELLSR-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVIL 165
Query: 170 MGLVEGFRINGLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMF 228
MG VEG+RI G P +GE D +YPGG FDPLGLADDP FAELKVKE+KNGRLAMFSMF
Sbjct: 166 MGAVEGYRIAGGP-LGEVTDPIYPGGS-FDPLGLADDPEAFAELKVKELKNGRLAMFSMF 223
Query: 229 GFFVQAIVTGKGPLENLLDHLENPVANNAWVYATKFVPG 267
GFFVQAIVTGKGPLENL DHL PV NNAW YAT FVPG
Sbjct: 224 GFFVQAIVTGKGPLENLADHLAGPVNNNAWAYATNFVPG 262
>sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa
subsp. japonica GN=CAB1R PE=2 SV=2
Length = 265
Score = 342 bits (877), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 182/265 (68%), Positives = 204/265 (76%), Gaps = 13/265 (4%)
Query: 4 IMAAATASSSTSLRATPFLGQSRTTANALKDVVPMGNAKYTMGNELWYGPDRVKYLGPFS 63
+MA A S+S++L G++R T ++ + G+ WYG DRV YLGP S
Sbjct: 12 VMARAAPSTSSAL-----FGEARIT---MRKTAAKPKPAASSGSP-WYGADRVLYLGPLS 62
Query: 64 AQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEKWL 123
+ PSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGC+ PE+L +
Sbjct: 63 GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAR-N 121
Query: 124 RVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPG 183
V F E VWFKAG+QIFSEGGLDYLGNP+L+HAQSILA+ QVVLMG VEG+RI G P
Sbjct: 122 GVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAGGP- 180
Query: 184 VGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 242
+GE D LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 181 LGEVVDPLYPGGA-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 239
Query: 243 ENLLDHLENPVANNAWVYATKFVPG 267
ENL DHL +PV NNAW YAT FVPG
Sbjct: 240 ENLADHLADPVNNNAWAYATNFVPG 264
>sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 member 1B, chloroplastic
OS=Pinus sylvestris PE=2 SV=1
Length = 274
Score = 342 bits (876), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 172/219 (78%), Positives = 186/219 (84%), Gaps = 4/219 (1%)
Query: 50 WYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLG 109
WYGPDRV YLGPFS + PSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLG
Sbjct: 58 WYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPENFAKNRELEVIHCRWAMLG 117
Query: 110 ALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVL 169
ALGC+ PE+L + V F E VWFKAGAQIFSEGGLDYLGNP+LVHAQSILA+ QV+L
Sbjct: 118 ALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVIL 176
Query: 170 MGLVEGFRINGLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMF 228
MG VEG+RI G P +GE D +YPGG FDPLGLA+DP FAELKVKEIKNGRLAMFSMF
Sbjct: 177 MGAVEGYRIAGGP-LGEVTDPIYPGGS-FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMF 234
Query: 229 GFFVQAIVTGKGPLENLLDHLENPVANNAWVYATKFVPG 267
GFFVQAIVTGKGP+ENL DHL +PV NNAW YAT FVPG
Sbjct: 235 GFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVPG 273
>sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays
GN=CAB-M9 PE=2 SV=1
Length = 265
Score = 342 bits (876), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 180/271 (66%), Positives = 205/271 (75%), Gaps = 21/271 (7%)
Query: 10 ASSSTSLRATPFLGQSRTTANALKDVVPMGNAKYTM------------GNELWYGPDRVK 57
ASS+ +L +T F G++ ++L G A+ TM WYGPDRV
Sbjct: 2 ASSTMALSSTAFAGKAVNVPSSL-----FGEARVTMRKTAAKAKPAASSGSPWYGPDRVL 56
Query: 58 YLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPE 117
YLGP S + PSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGC+ PE
Sbjct: 57 YLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE 116
Query: 118 VLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFR 177
+L + V F E VWFKAG+QIFSEGGLDYLGNP+L+HAQSILA+ QVVLMG +EG+R
Sbjct: 117 LLAR-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAIEGYR 175
Query: 178 INGLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIV 236
+ G P +GE D LYPGG FDPLGLADDP FA++KVKE+KNGRLAMFSMFGFFVQAIV
Sbjct: 176 VAGGP-LGEVVDPLYPGGT-FDPLGLADDPEAFADVKVKELKNGRLAMFSMFGFFVQAIV 233
Query: 237 TGKGPLENLLDHLENPVANNAWVYATKFVPG 267
TGKGPLENL DHL +PV NNAW YAT FVPG
Sbjct: 234 TGKGPLENLADHLADPVNNNAWAYATNFVPG 264
>sp|P04779|CB21_PETSP Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp.
GN=CAB13 PE=3 SV=1
Length = 266
Score = 341 bits (875), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 184/270 (68%), Positives = 203/270 (75%), Gaps = 12/270 (4%)
Query: 5 MAAAT---ASSSTSLRATPFLGQSRTTAN---ALKDVVPMGNAKYTMGNELWYGPDRVKY 58
MAAAT +SSS + +A S T N ++ V AK WYGPDRVKY
Sbjct: 1 MAAATMALSSSSFAGKAVNVPSSSEITRNGKVTMRKTVT--KAKPVSSGSPWYGPDRVKY 58
Query: 59 LGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEV 118
LGPFS + PSYLTGEFPGDYGWDTAGLSADP FA+NR LEVIH RW MLGALGC+ PE+
Sbjct: 59 LGPFSGEAPSYLTGEFPGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLGALGCVFPEL 118
Query: 119 LEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRI 178
+ V F E VWFKAG+QIF EGGLDYLGNP+LVHAQSILA+ QVVLMG VEG+R+
Sbjct: 119 FAR-NGVKFGEAVWFKAGSQIFKEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRV 177
Query: 179 NGLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVT 237
G P +GE D LYPGG FDPLGLADDP FAEL+VKEIKNGRLAMFSMFGFFVQAIVT
Sbjct: 178 AGGP-LGEVIDPLYPGGS-FDPLGLADDPEAFAELEVKEIKNGRLAMFSMFGFFVQAIVT 235
Query: 238 GKGPLENLLDHLENPVANNAWVYATKFVPG 267
GKGPLENL DHL +PV NNAW +AT FVPG
Sbjct: 236 GKGPLENLADHLADPVNNNAWAFATNFVPG 265
>sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 member 1A, chloroplastic
OS=Pinus sylvestris PE=2 SV=1
Length = 278
Score = 340 bits (872), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 169/219 (77%), Positives = 185/219 (84%), Gaps = 4/219 (1%)
Query: 50 WYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLG 109
WYGPDRV YLGPFS + PSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLG
Sbjct: 62 WYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLG 121
Query: 110 ALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVL 169
ALGC+ PE+L + V F E VWFKAGAQIFSEGGLDYLG+P L+HAQSILA+ QV+L
Sbjct: 122 ALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVIL 180
Query: 170 MGLVEGFRINGLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMF 228
MG +EG+R+ G P +GE D +YPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMF
Sbjct: 181 MGAIEGYRVAGGP-LGEVTDPIYPGGN-FDPLGLADDPDAFAELKVKEIKNGRLAMFSMF 238
Query: 229 GFFVQAIVTGKGPLENLLDHLENPVANNAWVYATKFVPG 267
GFFVQAIVTGKGP+ENL DHL +PV NNAW YAT FVPG
Sbjct: 239 GFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVPG 277
>sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplastic OS=Apium graveolens
GN=LHC0 PE=1 SV=1
Length = 264
Score = 340 bits (871), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 177/267 (66%), Positives = 206/267 (77%), Gaps = 14/267 (5%)
Query: 10 ASSSTSLRATPFLGQSRTTANALKDVVPMGNAKYTMGNEL--------WYGPDRVKYLGP 61
A+S+ +L + G++ A + ++ GN + +M + WYGPDRVKYLGP
Sbjct: 2 AASTMALSSPALAGKAVKVAPSSSEL--FGNGRVSMRKTVKAPVSDSPWYGPDRVKYLGP 59
Query: 62 FSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEK 121
FS + PSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGC+ PE+L +
Sbjct: 60 FSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAR 119
Query: 122 WLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGL 181
V F E VWFKAG+QIFSEGGLDYLGNP+LVHAQSIL++ QV+LMG VEG+R+ G
Sbjct: 120 -NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILSIWATQVILMGAVEGYRVAGG 178
Query: 182 PGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240
P +GE D LYPGG FDPLGLA+DP AELKVKE+KNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 179 P-LGEIVDPLYPGGS-FDPLGLAEDPERSAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 236
Query: 241 PLENLLDHLENPVANNAWVYATKFVPG 267
PLENL DHL +PV NNAW +AT FVPG
Sbjct: 237 PLENLADHLADPVNNNAWAFATNFVPG 263
>sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa
subsp. japonica GN=CAB2R PE=2 SV=2
Length = 261
Score = 340 bits (871), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 186/268 (69%), Positives = 200/268 (74%), Gaps = 13/268 (4%)
Query: 5 MAAAT-ASSSTSLR---ATPFLGQSRTTANALKDVVPMGNAKYTMGNELWYGPDRVKYLG 60
MAAAT A SS +L A G+ R T K WYG DRV YLG
Sbjct: 1 MAAATMALSSPALAGKAAAKVFGEGRITMRK-----SAAKPKPAASGSPWYGADRVLYLG 55
Query: 61 PFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLE 120
P S + PSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGC+ PE+L
Sbjct: 56 PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLA 115
Query: 121 KWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRING 180
+ V F E VWFKAG+QIFSEGGLDYLGNP+L+HAQSILA+ QVVLMG VEG+RI G
Sbjct: 116 R-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAG 174
Query: 181 LPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 239
P +GE D LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMFGFFVQAIVTGK
Sbjct: 175 GP-LGEVVDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 232
Query: 240 GPLENLLDHLENPVANNAWVYATKFVPG 267
GPLENL DHL +PV NNAW YAT FVPG
Sbjct: 233 GPLENLADHLADPVNNNAWAYATNFVPG 260
>sp|P12471|CB21_SOYBN Chlorophyll a-b binding protein, chloroplastic (Fragment)
OS=Glycine max PE=2 SV=1
Length = 245
Score = 338 bits (867), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 176/251 (70%), Positives = 192/251 (76%), Gaps = 11/251 (4%)
Query: 18 ATPFLGQSRTTANALKDVVPMGNAKYTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGD 77
+TP LG R + +K WYGPDRVKYLGPFS + PSYLTGEFPGD
Sbjct: 4 STPQLGVGRVSMRKTA-------SKTVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGD 56
Query: 78 YGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGA 137
YGWDTAGLSADPE FA+NR LEVIH RWAMLGALGC+ PE+L + V F E WFKAG+
Sbjct: 57 YGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAR-NGVKFGEASWFKAGS 115
Query: 138 QIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGND-LYPGGQY 196
QIFSEGGLDYLGN +L+HAQSILA+ QV+LMG VEG+RI G P +GE D +YPGG
Sbjct: 116 QIFSEGGLDYLGNQSLIHAQSILAIWATQVILMGAVEGYRIAGGP-LGEVTDPIYPGGS- 173
Query: 197 FDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLENPVANN 256
FDPL LADDP FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL DHL PV NN
Sbjct: 174 FDPLALADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAEPVNNN 233
Query: 257 AWVYATKFVPG 267
AW YAT FVPG
Sbjct: 234 AWAYATNFVPG 244
>sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chloroplastic OS=Pyrus
pyrifolia PE=2 SV=1
Length = 278
Score = 338 bits (867), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 167/219 (76%), Positives = 185/219 (84%), Gaps = 4/219 (1%)
Query: 50 WYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLG 109
WYGPDRV YLGPFS + PSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLG
Sbjct: 62 WYGPDRVMYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLG 121
Query: 110 ALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVL 169
ALGC+ PE+L + V F E VWFKAGAQIFSEGGLDYLG+P L+HAQSILA+ QV+L
Sbjct: 122 ALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVIL 180
Query: 170 MGLVEGFRINGLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMF 228
MG +EG+R+ G P +GE D +YPGG FDPLGLADDP FA++KVKEIKNGRLAMFSMF
Sbjct: 181 MGAIEGYRVAGGP-LGEVTDPIYPGGN-FDPLGLADDPDAFADVKVKEIKNGRLAMFSMF 238
Query: 229 GFFVQAIVTGKGPLENLLDHLENPVANNAWVYATKFVPG 267
GFFVQAIVTGKGP+ENL DHL +PV NNAW YAT FVPG
Sbjct: 239 GFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVPG 277
>sp|P04780|CB22_PETSP Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp.
GN=CAB22L PE=3 SV=1
Length = 267
Score = 337 bits (864), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 179/273 (65%), Positives = 200/273 (73%), Gaps = 19/273 (6%)
Query: 5 MAAATASSSTSLRATPFLGQSRTTANALKDVVPMGNAKYTM-----------GNELWYGP 53
MAAAT + S+S A + S +++ GN K TM WYGP
Sbjct: 1 MAAATMALSSSTFAGKVVKLSPSSSEI------TGNGKATMRKTATKAKPVSSGSPWYGP 54
Query: 54 DRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGC 113
DRVKYLGPFS + PSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGC
Sbjct: 55 DRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGC 114
Query: 114 ITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLV 173
+ PE+ + V F E VW KAG+QIFSEGGLDYLGNP+LVHAQSILA+ QV+LMG V
Sbjct: 115 VFPELFAR-NGVKFGEAVWLKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVLLMGAV 173
Query: 174 EGFRINGLPGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQ 233
EG+R+ G P + LYPGG FDPLGLA+DP FAELKVKE KNGRLAMFSMFGFF+Q
Sbjct: 174 EGYRVAGGPLGVVVDPLYPGGS-FDPLGLAEDPEAFAELKVKETKNGRLAMFSMFGFFIQ 232
Query: 234 AIVTGKGPLENLLDHLENPVANNAWVYATKFVP 266
AIVTGKGPLENL DHL +PV NNAW YAT FVP
Sbjct: 233 AIVTGKGPLENLADHLVDPVNNNAWSYATNFVP 265
>sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2
SV=1
Length = 265
Score = 336 bits (862), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 179/271 (66%), Positives = 201/271 (74%), Gaps = 21/271 (7%)
Query: 10 ASSSTSLRATPFLGQSRTTANALKDVVPMGNAKYTM------------GNELWYGPDRVK 57
ASS+ +L +T F G++ ++ G A+ TM WYGPDRV
Sbjct: 2 ASSTMALSSTAFAGKAVNVPSS-----SFGEARVTMRKTAAKAKPAAASGSPWYGPDRVL 56
Query: 58 YLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPE 117
YLGP S + PSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGC+ PE
Sbjct: 57 YLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 116
Query: 118 VLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFR 177
+L + V F E VWFKAG+QIFSEGGLDYLGNP+L+HAQSILA+ QVVLMG VEG+R
Sbjct: 117 LLAR-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR 175
Query: 178 INGLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIV 236
I G P +GE D LYPGG FDPLGLADDP F ELKVKE+K GRLAM SMFGFFVQAIV
Sbjct: 176 IAGGP-LGEVVDPLYPGGS-FDPLGLADDPEAFGELKVKELKKGRLAMLSMFGFFVQAIV 233
Query: 237 TGKGPLENLLDHLENPVANNAWVYATKFVPG 267
TGKGPLENL DH+ +PV NNAW YAT FVPG
Sbjct: 234 TGKGPLENLADHIADPVNNNAWAYATNFVPG 264
>sp|P22686|CB2_CHLMO Chlorophyll a-b binding protein of LHCII type I, chloroplastic
OS=Chlamydomonas moewusii PE=2 SV=1
Length = 256
Score = 334 bits (857), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 164/220 (74%), Positives = 184/220 (83%), Gaps = 3/220 (1%)
Query: 50 WYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLG 109
WYGPDR K+LGPFS TP+YLTGEFPGDYGWDTAGLSADPE F + R LEVIH RWA+LG
Sbjct: 39 WYGPDRAKWLGPFSTNTPAYLTGEFPGDYGWDTAGLSADPETFKKYRELEVIHARWALLG 98
Query: 110 ALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVL 169
ALG +TPE+L + V F EPVWFKAGAQIFSEGGLDYLG+P L+HAQ+I+A L QVVL
Sbjct: 99 ALGILTPELLSTYAGVKFGEPVWFKAGAQIFSEGGLDYLGSPALIHAQNIVATLAVQVVL 158
Query: 170 MGLVEGFRINGLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMF 228
MGL+EG+R+NG P GEG D LYP G+ FDPLGLADDP TFAELKVKEIKNGRLAMFS F
Sbjct: 159 MGLIEGYRVNGGP-AGEGLDPLYP-GESFDPLGLADDPDTFAELKVKEIKNGRLAMFSCF 216
Query: 229 GFFVQAIVTGKGPLENLLDHLENPVANNAWVYATKFVPGS 268
GFFVQAIVTGKGP++NL DHL +P NNA+ ATKF P +
Sbjct: 217 GFFVQAIVTGKGPIQNLADHLADPGTNNAFAAATKFTPSA 256
>sp|P04159|CB21_PEA Chlorophyll a-b binding protein AB96 (Fragment) OS=Pisum sativum
GN=AB96 PE=1 SV=1
Length = 228
Score = 331 bits (849), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 169/219 (77%), Positives = 185/219 (84%), Gaps = 4/219 (1%)
Query: 50 WYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLG 109
W+GPD VKYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLG
Sbjct: 12 WHGPDGVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLG 71
Query: 110 ALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVL 169
ALGC+ PE+L + V F E VWFKAG+QIFSEGGLDYLGNP+LVHAQSILA+ QV+L
Sbjct: 72 ALGCVFPELLSR-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVIL 130
Query: 170 MGLVEGFRINGLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMF 228
MG VEG+RI G P +GE D LYPGG FDPLGLA+ P FAELKVKE+KNGRLAMFSMF
Sbjct: 131 MGAVEGYRIAGGP-LGEVVDPLYPGGS-FDPLGLAEVPEAFAELKVKELKNGRLAMFSMF 188
Query: 229 GFFVQAIVTGKGPLENLLDHLENPVANNAWVYATKFVPG 267
GFFV AIVTGKGPLENL DHL +PV NNAW YAT FVPG
Sbjct: 189 GFFVPAIVTGKGPLENLADHLADPVNNNAWSYATNFVPG 227
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.138 0.428
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 109,741,556
Number of Sequences: 539616
Number of extensions: 4977561
Number of successful extensions: 9791
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 97
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 9330
Number of HSP's gapped (non-prelim): 167
length of query: 268
length of database: 191,569,459
effective HSP length: 115
effective length of query: 153
effective length of database: 129,513,619
effective search space: 19815583707
effective search space used: 19815583707
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)